LOCUS       DASSYW010000001         3157 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_589505, whole genome shotgun sequence.
ACCESSION   DASSYW010000001 DASSYW010000000
VERSION     DASSYW010000001.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3157)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3157)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3157
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_589505"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(74..910)
                     /locus_tag="VFN38_00005"
     CDS             complement(74..910)
                     /locus_tag="VFN38_00005"
                     /inference="COORDINATES: protein motif:HMM:NF013718.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HET9010156.1"
                     /translation="MSQTKGRRRTSRPLVSERREGERGRFHLLWDVVFRGLRALGVRA
                     NNFYATVGVFLVIGVVIAIAGTLAFAEMGEWVQKGLTQTFDVAVLQWLHQHSTPLLTQ
                     MATELTYLGTGTVVLMIVAVAALFLWHTEHKHSARLLLAAVAGNILLNGVLKLVFHRA
                     RPSVFEWQTTAVSSSFPSGHAMSATVCYGTVAYLVIRLQKHHWSRLLTGTAAVILILL
                     ICATRLYLGVHYPSDVIAGILVGLAWASFCMATLEASLLIARRRAPRAVVEERRAPTE
                     VA"
     gene            1002..1073
                     /locus_tag="VFN38_00010"
     tRNA            1002..1073
                     /locus_tag="VFN38_00010"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1034..1036,aa:Cys,seq:gca)
     gene            1226..1444
                     /locus_tag="VFN38_00015"
     CDS             1226..1444
                     /locus_tag="VFN38_00015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010157.1"
                     /translation="MTDEKRNPDATDAQRARGRDQEAELERELRRESQEGADSIGDMS
                     ENRNVSGSSTWETLNSRPADEEGRGEVF"
     gene            complement(1474..2844)
                     /locus_tag="VFN38_00020"
     CDS             complement(1474..2844)
                     /locus_tag="VFN38_00020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010158.1"
                     /translation="MNRSLPTLAIAALVIGGLAAREVGNGRTASTTIGGAHRAPFDVV
                     IADNMQRMMDEGRHTFRFDTFGDEAFWSDGLGLDRAIAGTKHGGVGAGVSPKTALALG
                     LKVDMDALPPAVVEGVKAGTVDMTDPATTLTLIRLNAVLGVVGTFEGDRMTKVGLTCA
                     VCHSTVDDAFAPGIGHRLDGFGNRDLDPGAIIGATPNFALLARELRVGVPTVKKVLAS
                     WGPGRFDAELDKDGKAMRPDGKQAGTIIPNAFGLAGVNNHTWTGGWGDVTYWNAYVAN
                     TELHGKGVFHDRRLSDARKYPVSARTGGWNVRNSPDLVTSKLGALQLYQLAIPAPPPP
                     AGSFDAAAAARGERLFAGKATCASCHVPPLFTEPGWNTHKASEIGIDDFQSKRSPDES
                     YRTTPLKGLWTYDKKNGHGAAGPGYYHDGRFADLLAVVQHYDSHLKLHLSPQEMRDLV
                     EYLKSL"
BASE COUNT          506 a         1056 c         1099 g          496 t
ORIGIN      
        1 tagtagatcc cgacactcgc ttcgctcgtg cgggatgaca ttcctgctcc ccacgccgca
       61 cggccgttcg cggctacgcg acttccgtcg gcgcgcggcg ttcctcgacc acggcgcgtg
      121 gcgcccggcg tcgtgcgatg agcagcgagg cctcgagcgt ggccatgcag aagctcgccc
      181 acgcgagccc gacgaggatg ccggcgatga cgtccgacgg atagtgcacg ccgaggtaca
      241 gccgggtcgc gcagatgagc aggatgagga tgaccgccgc cgtgccggtg agcagccgcg
      301 accagtggtg cttctggagc cggatgacga gatacgccac cgtgccgtag cagaccgtcg
      361 cgctcatggc gtgccccgac gggaacgacg agctcaccgc cgtcgtctgc cactcgaaga
      421 cgctgggacg cgcccggtga aagacgagct tgagcacgcc gttgagcagg atgttgcccg
      481 ccaccgcggc gaggagcagc cgtgccgagt gcttgtgctc cgtatgccag agaaagagcg
      541 cggcgaccgc gacgatcatc agcacgaccg ttccggtgcc gaggtaggtc agctcggtcg
      601 ccatctgggt gaggagcggc gtgctgtgct ggtgcagcca ctggagcacg gcgacgtcga
      661 acgtctgggt gagccccttc tgcacccact cgcccatctc ggcgaaggcg agggtgccgg
      721 cgatggcgat gacgacgccg atgacgagga agaccccgac ggtcgcgtag aagttgttgg
      781 cgcggacgcc gagggctcgc agcccacgga agacgacatc ccacagcagg tgaaaccgtc
      841 cacgctcacc ttcgcggcgc tcgctgacga gcggccgcga ggtacgccgg cgtcccttgg
      901 tctggctcat ggtgcaagat gttatcaaga gccgcgccgg gcgacccgac gtgggcgtga
      961 cgggttgagc cgatcggtca cggacggtac ctttggggca cggcgccgtg gccaagtggt
     1021 aaggcggcag actgcaaatc tgctattcgt cggttcgatt ccgaccggcg cctctcagca
     1081 gcaccgaaca gccgacgact gtgatccgcg acacgaggcc ccgcgcatgc gcgaggcctc
     1141 gtgtgcgttc ggcttcggtg cgggccggaa cgctggcttg catcgtgcgg tcgacccagc
     1201 atcaccttca gacgggagac ctgccatgac ggacgagaag cggaatccgg acgcgacgga
     1261 cgcgcagcga gcgcgtgggc gcgaccagga agcggagctc gagcgcgagc tgcgtcgcga
     1321 atcgcaggaa ggcgcggact ccatcgggga catgagcgag aaccgcaacg tgagcggctc
     1381 ctccacctgg gagacgctca acagccgccc ggccgacgaa gagggccgag gcgaggtgtt
     1441 ctgacgccca cggccctccg cacggcgcga tggctacagc gacttgaggt actcgaccag
     1501 gtcgcgcatc tcctgcggcg agagatggag cttgagatgt gaatcgtagt gctgcaccac
     1561 ggcgagcagg tcggcgaacc ggccgtcgtg gtagtagccc ggccccgcgg cgccgtggcc
     1621 gttcttcttg tcgtacgtcc agagcccctt gaggggcgtc gtgcggtagc tctcgtcggg
     1681 tgagcgcttc gactggaagt cgtcgatgcc gatctcgctc gccttgtggg tgttccaacc
     1741 cggctcggtg aagagcggcg gcacgtgaca ggacgcgcac gtcgccttgc cggcgaacag
     1801 ccgctcaccg cgcgccgccg cggccgcgtc gaacgagccc gccggcggtg gcggcgccgg
     1861 gatcgcgagc tgatagagct gcagcgcgcc tagcttcgac gtcaccaggt ccggtgagtt
     1921 gcgcacgttc cagccgccgg tgcgcgcgct caccggatac ttcctcgcat cgctcagccg
     1981 ccggtcgtgg aacacgccct tgccgtgcag ctcggtgttg gcgacgtacg cgttccagta
     2041 ggtcacgtcg ccccagccgc cggtccaggt gtgattgttc acgccggcca gcccgaaggc
     2101 gttcgggatg atcgtgccgg cctgctttcc gtcgggacgc atcgccttgc cgtccttgtc
     2161 gagctccgcg tcgaaccggc cgggtcccca gctcgccagc accttcttca ccgtggggac
     2221 gccgaccctg agctcccgcg cgagcagcgc gaagttgggc gtggccccga tgatcgcccc
     2281 cggatctagg tcgcgattgc cgaagccgtc gagccgatgg ccgatgccgg gcgcaaaggc
     2341 gtcgtccacg gtggagtgac ataccgcgca ggtcagtccg accttcgtca tccggtcgcc
     2401 ctcgaaggtg ccgacgacgc cgagcaccgc gttcagcctg atgagcgtga gggtggtggc
     2461 gggatcggtc atgtccaccg tgcccgcctt cacaccttcg acgaccgccg gcggcaacgc
     2521 atccatgtcc accttgaggc cgagggcgag cgcggtcttc gggctcacgc cggcacccac
     2581 gccgccgtgc ttcgttccgg cgatcgcccg gtccagcccg agtccgtcgc tccagaaggc
     2641 ctcgtcgccg aaggtgtcga accggaaggt gtggcgacct tcgtccatca tccgctgcat
     2701 gttgtcggcg atcacgacgt cgaacggcgc gcggtgagcg cccccgatcg tggtgctcgc
     2761 cgtgcggccg ttgccgacct cgcgtgccgc gagcccgccg atgacgaggg cggcgatcgc
     2821 gagggtggga agggatctgt tcatggctct cctgcaagtc gagcctggag ccgcagctca
     2881 ggccgatcgg acgcatgcgt cggcgctccg ctctgcggcg cggaccgcac cgcggcgcgc
     2941 cgcatttgcc gtaccatttg tcaataactt cgtggacata ttatccagcg cgtgctgcga
     3001 ccgagccacg cacgagcctg caatccttca gcgcaacgcc gtaatgaaac gagacgacct
     3061 cttgccgccg ggaccctgcg ggaataaatg gcggctgtcg tgagtctcga catcgggtcc
     3121 ggctgtccgg tcgtgggagc gcgggagcac agcaatg
//
LOCUS       DASSYW010000002         2467 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1786888, whole genome shotgun sequence.
ACCESSION   DASSYW010000002 DASSYW010000000
VERSION     DASSYW010000002.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2467)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2467)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2467
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1786888"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..645)
                     /locus_tag="VFN38_00025"
     CDS             complement(<1..645)
                     /locus_tag="VFN38_00025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010159.1"
                     /translation="MVVRPPMLRWGATEEEVRDPYPGADLVPGGRRGSTMATTIDAPP
                     SRVWPWLVQMGCNRGGWYSWDRLDNGGIPSAERIHPEWQSIAAGDRLLSLPSGKAWFE
                     VAAVEPERFLALRAPLDRSGQPFDTSGPRPRHYTDSVWCFLLEDLPGDRTRLVVSGYE
                     AASSRLLQAVANFLFWEPAHWIMQTRQFTGLARRATAVAPDGDGSAAKGPEATAA"
     gene            881..1432
                     /locus_tag="VFN38_00030"
     CDS             881..1432
                     /locus_tag="VFN38_00030"
                     /inference="COORDINATES: protein motif:HMM:NF024135.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin domain-containing protein"
                     /protein_id="HET9010160.1"
                     /translation="MLIVYASNHGQTARIASRIAGVLREDGDTVDLHEVGAAADLSPY
                     GYDAAIVGGSIHAGHHQRELVDWARHHAAALNGMPSAFFSVSLGAAEDDDESREAARK
                     YIDDFLDDTGWTPRRTEPIAGALQYREYDFFTRTLMRLLMRQEGHPTDTSRDYDYTDW
                     DAVDRFARECAATLVHPGSGTPS"
     gene            1480..>2467
                     /locus_tag="VFN38_00035"
     CDS             1480..>2467
                     /locus_tag="VFN38_00035"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD/NAD(P)-binding oxidoreductase"
                     /protein_id="HET9010161.1"
                     /translation="MGSGVAGLEAVIALRALAGARVSIKLVTPATEFVYRPQAVGEPF
                     DLGTPQRHGLDGVAADFDVEIVHGSFDWAAPRPQRIFTKEGDEMGYDALLLAMGARPR
                     PVWDHVVTFAGSQEADAVRAIVRDMESAEVGSIAFVVPPGTTWPLPLYELALLTARRA
                     EAAGVHPELALYTPEREPLALFGREASAAVASELERAGVLVARYASATVTPHGDLVIP
                     FEETPRRFERVISLPALSGPAPRGIPHDDDGFIPIDAHGVVQGERHVYAAGDGTDFPI
                     KHGGIAAQQADAAAEVIAKRAGAAVAPRPFRATLRGQLLTGAEPQYLRADLDS"
BASE COUNT          344 a          907 c          888 g          328 t
ORIGIN      
        1 cgccgcggtg gcttcggggc ccttcgctgc ggagccgtcg ccatccggcg cgactgccgt
       61 cgcgcgccgc gcgagacccg tgaactggcg cgtctgcatg atccagtgcg cgggctccca
      121 gaacaggaag ttcgcgacgg cctggagcag tctcgagctg gccgcctcgt agccgctcac
      181 caccaggcgc gtgcggtcgc ccggcaggtc ctcgagcagg aagcaccaga cggagtcggt
      241 gtagtgccgc ggccgcgggc cgctcgtgtc gaacggctgg ccgctgcggt cgagtggcgc
      301 cctcagcgcg agaaagcgct cgggctcgac cgctgccacc tcgaaccacg ccttgccgct
      361 gggaagcgag agcagccggt cgccggccgc gatcgactgc cactcggggt ggatccgctc
      421 cgcgctcggg atcccgccgt tgtcgagccg gtcccagctg taccagccgc cgcggttgca
      481 gcccatctgc acgagccacg gccacacgcg cgacggcggg gcgtcgatgg tcgtcgccat
      541 cgtcgagccg cgcctgccgc ccggcacgag atccgcgccg gggtaggggt cgcggacctc
      601 ttcctccgtc gcgccccagc ggagcatcgg ggggcggacg accaccgcgt aggcgacacc
      661 ggccgcgaga gctgcctcga ctgctcttgc aagtctcatc ggcgagaaag tacgccgccg
      721 tcgccggcct cgtcatcggg tgctgcaccc cgtgggagtc cgtagttgtc cgcaagagaa
      781 cggcgggagc accggatgcc acgccctcgc gatggcgcca cgctgatggg gtgagcagcc
      841 agacgcccca gattgaacga ggggaggcaa cgtgagcggc atgctgatcg tctatgccag
      901 caaccacggc cagacggcgc gcatcgcgtc gcggatcgcc ggagtgctcc gcgaggacgg
      961 cgacacggtg gaccttcacg aggtgggggc ggcggcggat ctctcgccgt acggctacga
     1021 cgcggcgatc gtgggcgggt cgatccacgc aggccaccac cagcgcgagc tggtcgactg
     1081 ggccagacac catgcggcgg cgctgaacgg gatgccgtcg gccttcttct cggtatcgct
     1141 gggcgccgcg gaggacgacg acgagtcgcg cgaggccgca cgcaagtaca tcgacgactt
     1201 cctcgacgac accggctgga cgccccgcag gacggagccg atcgcggggg cgctccagta
     1261 ccgggaatac gacttcttca cgcgcacgct gatgcgtctg ctcatgcgcc aggagggcca
     1321 cccgaccgac acctcgcggg actacgacta caccgactgg gacgcggtgg accgcttcgc
     1381 gcgcgaatgc gccgcgacgc tcgtgcaccc ggggtcgggg acgccgtcgt gagcggcgcc
     1441 ggccggattc cgagcgggcc cccactcgag gtcgtcgtgg tgggtagcgg cgtcgcgggg
     1501 ctcgaggccg tgatcgccct tcgcgccctc gcgggcgcgc gtgtgagcat caagctggtc
     1561 actcccgcca cggagttcgt ctaccggccg caggccgtgg gtgagccctt cgacctcggc
     1621 acgccgcagc ggcacggcct tgacggcgtt gcggccgact tcgacgtgga gatcgtccac
     1681 ggcagcttcg actgggcagc gccgcgcccg cagcggatct tcaccaagga gggcgacgag
     1741 atgggctacg acgcccttct cctcgccatg ggcgcgcgcc cgcgcccggt ctgggaccac
     1801 gtcgtcacgt ttgcgggctc gcaggaggcg gacgccgtgc gcgcgatcgt gcgcgacatg
     1861 gaaagcgccg aggtcggcag catcgccttc gtcgtcccgc ccgggaccac ctggccgctg
     1921 ccgctctacg agctggcgct tctcacggcg cggcgcgccg aggccgccgg ggtgcacccc
     1981 gagcttgcgc tctacacccc cgaacgcgag ccgctggcgc tcttcggccg cgaggcgagc
     2041 gccgcggtcg cgtccgagct cgagcgcgcg ggcgtgctcg tggcgcgcta cgcatccgcg
     2101 accgtcacgc cccacggcga tctggtcatc ccgttcgagg agaccccgag gcggttcgag
     2161 cgtgtgatct cgctccccgc gctgagcggt cccgcgccgc gcggcatccc gcacgacgac
     2221 gacggcttca tcccgatcga cgcgcacggg gtggtgcagg gcgagcgcca cgtctacgcc
     2281 gcgggcgacg gcaccgactt cccgatcaag cacggcggca tcgccgccca gcaggccgac
     2341 gcggcggccg aggtgatcgc gaagcgcgcc ggggccgccg tcgccccgcg tccgttccgg
     2401 gcgacactcc gcggccagct cctcaccgga gcggagccgc aatacctccg tgccgacctg
     2461 gactccc
//
LOCUS       DASSYW010000003         2722 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_626367, whole genome shotgun sequence.
ACCESSION   DASSYW010000003 DASSYW010000000
VERSION     DASSYW010000003.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2722)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2722)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2722
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_626367"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..489)
                     /locus_tag="VFN38_00040"
     CDS             complement(<1..489)
                     /locus_tag="VFN38_00040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010162.1"
                     /translation="MRSFLPLLLFALVALILVWDVVLAARIAQVRTLPRGFVTLSALA
                     GFLVVPALVIHLATTSSITGRALISVDWLWPVTVTLFALQALYAAARRLVNPFLGFFI
                     AAYDLVIAADAVLRFIASRGTALPGLALVFLAATTATFAFVTQSPLILGSPFFFFTPM
                     IAP"
     gene            complement(491..838)
                     /locus_tag="VFN38_00045"
     CDS             complement(491..838)
                     /locus_tag="VFN38_00045"
                     /EC_number="4.1.1.50"
                     /inference="COORDINATES: protein motif:HMM:NF014705.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004014 - adenosylmethionine decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0008295 - spermidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-adenosylmethionine decarboxylase"
                     /protein_id="HET9010163.1"
                     /translation="MTESDALAHVSADLSGVGSGPLRDAGLLSGLLIAAAGAAGLNAA
                     GAPIVRTAPTGGISAVLLLDPCHVSIHSLPDRGLALVDVLAPDVGGATKALDVFVRRL
                     APAAVTSDTRMRG"
     gene            complement(1019..1486)
                     /locus_tag="VFN38_00050"
     CDS             complement(1019..1486)
                     /locus_tag="VFN38_00050"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HET9010164.1"
                     /translation="MASGVAALLRNVPLFKDLDDAELSELADVCREEKFVSGEYIFRE
                     GEHGNRLYLITEGEVRISRDVPGSGEEALAVLKPGAVFGEMAVFDRSERSTHAISNGG
                     TTALTITRPDFEMLLDFNRELAYKVLWSVTRLLTARLRSTNDSLRSFLAMSMF"
     gene            1608..2135
                     /locus_tag="VFN38_00055"
     CDS             1608..2135
                     /locus_tag="VFN38_00055"
                     /inference="COORDINATES: protein motif:HMM:NF013250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HET9010165.1"
                     /translation="MTPRRALGTIPNLLSASRLVLAAGFVAAGATEARVGLIGAAAAT
                     DFLDGWLARRVRATSRWGALLDPIADRVFVLTVVATFLFTGKLSTGAYFILLMRDLAT
                     AVGFLVARVIPWLRPVQFKARILGKVVTVLQLLTLAAVLVWPAGVPLLLGGVALTSGL
                     SIADYTLALWRARRR"
     gene            2132..2635
                     /locus_tag="VFN38_00060"
     CDS             2132..2635
                     /locus_tag="VFN38_00060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010166.1"
                     /translation="MTGALSRIALGVAVLAAVPRPARAQLPETPGVMPELRGDVILGR
                     AASVQLGAGVQVPAGYYVRVGVDGAVGMRVGDASVPAHEVNGRLDVLVRFLLDPFRQT
                     AYGLSLGGGMSLRAEPHDRARPVLLVAVDLEGRRSTRGLVPAVQVGLGGGTRIGVVLR
                     RGAQGAR"
BASE COUNT          398 a          889 c         1058 g          377 t
ORIGIN      
        1 cggcgcgatc atcggcgtga agaagaagaa gggcgagccg aggatgagcg gcgactgggt
       61 gacgaaggcg aaggtcgccg tggtcgcggc gaggaagacg agcgccagcc ccggcaacgc
      121 cgtgccgcgt gaggcgatga agcgcagcac cgcgtcggcg gcgatgacga ggtcgtacgc
      181 cgcgatgaag aagccgagga acgggttcac gaggcggcgc gcggcggcgt acagcgcctg
      241 gagcgcgaag agcgtcaccg tgaccggcca gagccaatcc accgagatga gcgcgcggcc
      301 cgtgatgctg ctggtggtgg cgaggtggat caccagcgcc ggcaccacga gaaagccggc
      361 gagcgccgac agcgtgacga agccgcgcgg cagcgtgcgg acctgggcga tgcgcgccgc
      421 gagcacgacg tcccagacga ggatcagcgc gacgagcgcg aagaggagga gcgggaggaa
      481 cgaacgcatc tcagccccgc atccgggtgt cgctcgtgac ggcggcaggg gcgagccggc
      541 gcacgaagac gtcgagcgcc ttggtggccc cgccgacatc gggggcgagg acgtccacga
      601 gcgcgaggcc gcggtcgggc agcgagtgaa tgctcacgtg acaggggtcg aggagaagca
      661 cggcggagat gccgccggtg ggtgcggtgc ggacgatcgg tgcgccggcg gcgttcaggc
      721 cggcggcgcc ggcggccgcg atgagcagcc cgctcagcag acccgcgtcg cgcaacgggc
      781 cggagcccac accggacagg tccgcgctca cgtgcgcgag ggcgtcggac tcggtcacga
      841 gcaccgctcg aaacgcgcga tctgggcgac gaagccgaag ttcacgtggg aaaggtcgtg
      901 tcgggaaggt gccggcgctc gccgagctcg agccgttccg tgaagcgaag tccgggccag
      961 cccgctttca cggaacgagg agcgggctcg tgcacggaaa tctaccgcag cgcctcgctc
     1021 agaacatcga catggcgaga aacgaccgga gcgaatcatt ggtgctgcgc aaccgggcgg
     1081 tcagaaggcg ggtcacggac cagagcacct tgtacgccag ctcgcggttg aagtcgagca
     1141 gcatctcgaa gtcggggcgc gtgatcgtga gtgcggtggt gccgccgttg gagatggcat
     1201 gcgtggaacg ctcgctccgg tcgaacaccg ccatctcgcc gaacaccgcg ccaggcttga
     1261 gcaccgccag ggcctcctcg ccgctgccgg gaacgtcgcg gctgatgcgc acctcgccct
     1321 cggtgatcag gtagagccgg ttgccgtgct cgccctcgcg gaagatgtac tcgccgctca
     1381 cgaacttctc ctcgcggcag acgtcggcga gctcggagag ctcggcgtcg tcgaggtcct
     1441 tgaacagcgg gacgttcctg agcagggcgg cgacgccgga ggccattaag gacgcggtgg
     1501 gatggtgggc gatgggtgcg ccaagctagg aacgggtcac ggcgtgagca agtcgccggg
     1561 cccggcgtcg atgcgaccgg ccgggggcgc ggttatgatt cggcgtgatg actccccggc
     1621 gcgcgctcgg cacgattccc aacctgctgt ccgcctcgcg actcgtgctc gccgccggct
     1681 tcgttgccgc cggcgcgacc gaggcgcgtg ttgggctgat cggcgccgcc gcggccaccg
     1741 attttctcga tggctggctg gcgcgtcgag tgcgcgccac gtcgcgctgg ggcgcgctgc
     1801 tcgatcccat cgcggaccgc gtcttcgtgc tcacggtggt ggcgaccttc ctgttcacgg
     1861 gaaagctgag cacgggcgca tacttcatcc tgctcatgcg cgacctggcg acggcggtcg
     1921 gcttcctggt ggcgcgcgtg atcccgtggc tgcggcccgt gcagttcaag gcgcgcatcc
     1981 tcggcaaggt ggtcaccgtg ctccagcttc tcacgctggc cgcggtgctc gtgtggccgg
     2041 cgggggtgcc cctcctgctc ggcggcgtgg cgctgacgtc ggggctgtcc atcgccgact
     2101 acacgctggc cctctggcgc gcgcgtcgcc ggtgacggga gcgctctcgc ggatcgcgct
     2161 cggcgtcgcc gtgctcgcgg cggttccgcg acccgcccgc gcgcagctgc cggagactcc
     2221 cggcgtgatg ccggagctcc gcggcgacgt gatcctgggc cgagcggcgt ccgtgcagct
     2281 cggtgcgggg gtgcaggtgc cggcgggcta ttacgtgcgc gtcggcgtgg acggcgcggt
     2341 gggcatgcgc gtcggcgacg cgagcgtccc tgcgcacgag gtgaacggtc ggctcgacgt
     2401 gctcgtgcgc tttctgctcg atccgttccg tcagaccgcg tacggtctct cgctcggcgg
     2461 cgggatgagc cttcgcgccg agccgcacga tcgcgcgcgg ccggtgctgc tcgtggccgt
     2521 ggatctcgag gggcggcgct cgacccgcgg gctcgtcccc gcggttcagg tggggctcgg
     2581 cggcggcacg cgcatcggcg tggtgctgcg ccgcggcgcc cagggcgccc gctgacacaa
     2641 acgggaacgc ccccggaaat ccggaggcgt atcgtgtgcg tcgacgcgga acggtcaggc
     2701 cgccgaagcg gcgtcggact cg
//
LOCUS       DASSYW010000004         2348 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_607579, whole genome shotgun sequence.
ACCESSION   DASSYW010000004 DASSYW010000000
VERSION     DASSYW010000004.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2348)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2348)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2348
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_607579"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1184
                     /locus_tag="VFN38_00065"
     CDS             <1..1184
                     /locus_tag="VFN38_00065"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HET9010167.1"
                     /translation="SRPPVAVADDEAYWTEIQRAFDLDRTMVNLNNGGCSPAPTHVLE
                     QMIRDLRFSNELPVDHMWRVLEPRIESVRRDLARDFGCDPDEMAITRNASEANETMIF
                     GLDLKAGDEVVMTTQNYPRMQNAWRQRERREGIVLKRVKLETPVKSTASYVEQIANAI
                     TPRTKVIEVMHISFQTGYIAPVREIVELAAPKGIQVFVDGAHAFAHFPFTRDELGCDY
                     YGTSLHKWLHAPIGTGFLYVRRNRIKSLWPLMAGGVEQEGDIRKYEEIGTHPAANHNA
                     ISVAIAFNRGIGAERKIARLRYLRDRWAKQLLAASDRVSMITEIGPARSGAIGVVAIE
                     GMDLGKLGGWLLAQHRIVTTPMVTDEFQGLRITPNVYTTTDEVDLFADRVTKAIKQGI
                     A"
     gene            1303..2280
                     /locus_tag="VFN38_00070"
     CDS             1303..2280
                     /locus_tag="VFN38_00070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010168.1"
                     /translation="MNVNGGVLLFAAMVAVGCRDRDAREANVAPRATAAAVALVVGGS
                     ALVPSRAVPEGVPLLVLGPFLVNGMPYTVEMERYLNDPDTAVRRIRLRDSTRRVVHEE
                     DLAAMLQGDSTSWIELSVGPLEDAAGRARGLEIQYGFFPSAPNSGDAFMILVPRDGAL
                     RPLTPRISYSGNLDPLPSGAQPRSQRLLPGDRAVIKPWMYNYAAVVPVHVDLGCEPGS
                     PSCITLALPDSIAGLARFAVEAEPRAIESAAAVELFPAPGNATPERIQLVAGSRIAVL
                     GGAGRVSFDRSRGMDLVVTEDWLLVRVNDRTGWVHGAATYGALGLPSAG"
BASE COUNT          371 a          778 c          849 g          350 t
ORIGIN      
        1 ggtcccggcc gccggtggcg gtggccgacg acgaggccta ctggacggag atccagcgcg
       61 ccttcgacct ggaccggacg atggtgaacc tgaacaacgg gggctgcagt ccggcgccga
      121 cccacgtgct ggagcagatg atccgggatc tccggttctc gaacgagctg ccggtggatc
      181 acatgtggcg cgtgctcgag ccgcgcatcg agtcggtgcg gcgcgacctc gcgcgcgact
      241 tcggctgcga tcccgacgag atggcgatca cgcgcaacgc gtcggaggcc aacgagacga
      301 tgatcttcgg tctcgacctc aaggcgggcg acgaggtggt gatgacgacg cagaactacc
      361 cgcgcatgca gaacgcctgg cggcagcgcg agcggcgcga ggggatcgtg ctcaagcggg
      421 tgaagctcga gacgccggtg aagagcaccg cgtcgtacgt ggagcagatc gccaacgcga
      481 tcacgccgcg gacgaaggtg atcgaggtga tgcacatcag cttccagacc gggtacatcg
      541 ccccggtgcg ggagatcgtc gagctcgcgg cgccgaaggg gatccaggtg ttcgtggacg
      601 gggcgcacgc cttcgcgcac ttcccgttca ctcgcgacga gctgggctgc gactattacg
      661 gtacaagcct gcacaagtgg ctgcacgctc ccatcggcac cggcttcctc tacgtgcggc
      721 gcaacaggat caagtcgctg tggccgctga tggccggcgg cgtggaacag gaaggcgaca
      781 tccggaagta cgaggagatc ggcacgcatc cggccgcgaa ccacaacgcg atctccgtcg
      841 cgatcgcctt caaccgtggc atcggcgccg agcgcaagat cgcgcggctg cgctacctgc
      901 gggaccggtg ggcgaagcag ctgctcgcgg cgagcgaccg ggtctccatg atcacggaga
      961 tcggaccggc ccgcagcggc gcgatcggcg tcgtggcgat cgaggggatg gacctcggca
     1021 agctgggcgg atggcttctg gcccagcacc ggatcgtcac cacgccgatg gtgaccgatg
     1081 agttccaggg gctccgaatc acgccgaacg tgtacacgac gacggacgag gtggatctgt
     1141 tcgccgaccg cgtgacgaag gcgatcaagc aggggatcgc gtaggggcgc cgcagctggt
     1201 ggcgcgccgt gatgccatgg acgcctgaat catcgcgggc gcgtgacacg ggagccgcgg
     1261 ggtgggcggt tgcgtgcccg cgagcggctc gtcgaatccc tgatgaacgt caacggcgga
     1321 gtcctgctct tcgcggccat ggttgcggtc ggctgccgcg atcgcgacgc ccgggaggcg
     1381 aatgtcgccc cgcgcgcgac ggctgccgcg gtggcgctcg tggtcggcgg cagcgcgctg
     1441 gtgccctcca gggccgtgcc ggagggcgtg ccgctgctgg tgctgggacc atttctcgtg
     1501 aacggcatgc cgtacacggt cgagatggag cgctacctca acgatcccga caccgccgtg
     1561 cggcggatca ggttgaggga ctcgacgcgg cgcgtcgtcc atgaggagga cctcgcagcg
     1621 atgctgcagg gcgactccac gagctggatc gagctctccg tcgggccgct cgaggatgca
     1681 gccggtcgcg cccgcggcct ggagatccag tacggcttct ttccgagtgc gccgaactcc
     1741 ggcgacgcct tcatgatcct ggtgccgcgc gacggagcgc tgcggccgct cacgccgcgg
     1801 atcagctact ccggcaacct cgatcccctg ccgtcgggag cgcagccgcg ctcacagcga
     1861 ctgctccccg gcgatcgcgc ggtgatcaag ccgtggatgt acaattacgc cgcggtcgtg
     1921 cccgtacacg tcgatctcgg ctgcgagcca ggctcgccca gctgcatcac cctcgccctg
     1981 cccgattcga tcgccgggct ggcgcgcttc gccgtggagg ccgagccacg ggcaatcgag
     2041 tcggcggcgg ccgtggagtt gtttcccgcg cccggcaacg ccacgcccga gcgcatccag
     2101 ctcgtggccg gcagcaggat cgcggtgctc ggcggcgcgg gccgcgtgtc gttcgaccga
     2161 agccgtggga tggacctcgt cgtcaccgag gactggctgc tcgttcgagt gaacgatcga
     2221 accggctggg tgcatggcgc cgccacgtat ggcgcactcg gcctgccgag cgcgggctag
     2281 tcctgccccg tcgttcgacc gcccgcaacg cacgacgccc cgcaccactt tcgtggtgac
     2341 ggggcgtc
//
LOCUS       DASSYW010000005         3182 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1602772, whole genome shotgun sequence.
ACCESSION   DASSYW010000005 DASSYW010000000
VERSION     DASSYW010000005.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3182)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3182)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3182
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1602772"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..503
                     /locus_tag="VFN38_00075"
     CDS             <1..503
                     /locus_tag="VFN38_00075"
                     /inference="COORDINATES: protein motif:HMM:NF024829.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HET9010169.1"
                     /translation="GAGVSNAEAGVRLAQARLGAAQAARDNAALQLSYTRVTAPVAGI
                     VSRKQVEVGQLVQAGQPLLTVVSDTGVWVTANFKETQLHDLRVGQDVELDIDAYGGVS
                     AKGKVESVSAATGAKFALLPPDNATGNFTKVVQRVPVRIRITEGLGKDRPLRPGMSVV
                     AHVSTQ"
     gene            526..2157
                     /locus_tag="VFN38_00080"
     CDS             526..2157
                     /locus_tag="VFN38_00080"
                     /inference="COORDINATES: protein motif:HMM:TIGR00711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HET9010170.1"
                     /translation="MSTTAIRRDGVSGEVTDRSGLPAGARVVAEDKYKYKYLIAIAVT
                     LAAVLELIDTSIVNVAIPHMMGNLGATLDEISWVSTGYIIANVIVIPLSSWLSGYFGR
                     KRYLTGSILLFVLASFFCGAATSLGGLVFWRVVQGLGGGALLSTAQATLFEAFPPKEV
                     GVGQAVFGVGVMVGPTIGPTLGGFIVDNWAWPWIFYINIPLGIIAAFMVWTYVHDSEH
                     QERAGTIDGTGILLLALCVGSLQWMLERGERYDWFESRFVTVLALTSVTSFGLLLWRE
                     LTIDEPVINFRVLLNRQLAAGVMIAAFLGFALYGSVFVLPVFLQGLHGWTANQTGLVI
                     LPGAMASAFTMAFVGRNAARLDARVTVPIGASLFCLAMYRLSLLTFDAGASDVFWPLI
                     IRGVGLGLIFVPLTGATMAELRTSELPQGTGMFNLTRQLGGSLGIAISATLLSRFTSQ
                     SRALLAEHIVIGDPVAVARVDGITRALVAKGMNALSAKQQALMILDRQLQGQASVLAF
                     SKLYLLSGLALMAAMPLLFLFRSGKSRGLGPGAAH"
     gene            complement(2174..2434)
                     /locus_tag="VFN38_00085"
     CDS             complement(2174..2434)
                     /locus_tag="VFN38_00085"
                     /inference="COORDINATES: protein motif:HMM:NF025614.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPXCG motif-containing cysteine-rich protein"
                     /protein_id="HET9010171.1"
                     /translation="MVDFVNDDDPAADLDDEFPLGDGTAETESIVTCPHCGEMNEIAL
                     DPGSGDDQEYIEDCHVCCRPILMYVRYGRDGTAEVEVYASDS"
     gene            2634..>3182
                     /locus_tag="VFN38_00090"
     CDS             2634..>3182
                     /locus_tag="VFN38_00090"
                     /inference="COORDINATES: protein motif:HMM:NF024436.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein activator LpoB"
                     /protein_id="HET9010172.1"
                     /translation="MSLRRPRPLGATWSLAAALLLVGASGCVTKRVTRIEPTAVTDLS
                     GRWNDTDSRLVANQLVEQTLGAGWAKRYADTHGGEAPTVVVGTFANRTMEHIAVGTFV
                     KDVERALITTGAARVVASGDQRAEMRGERADQQQNARADTRARQGQELGARYMLAGDL
                     QAIEDVDGRERVVFYQVDASLID"
BASE COUNT          470 a         1071 c         1090 g          551 t
ORIGIN      
        1 cgggagcggg agtgtccaat gccgaagccg gcgtgcgcct cgcgcaggcg cgactcgggg
       61 cggcgcaggc cgcgcgcgac aacgcggcgc tgcagctctc gtacacccgg gtcacggcac
      121 ccgtcgcggg catcgtgtcg cgcaagcagg tcgaggtggg ccagctcgtg caggcgggtc
      181 agccgctgct caccgtcgtg tccgacaccg gtgtctgggt gacggcgaac ttcaaggaga
      241 cgcagctgca cgatctgcgc gtcggacagg acgtcgagct ggacatcgac gcgtacggcg
      301 gcgtgtcggc gaagggaaag gtggagagcg tgagcgcggc gaccggggcg aagttcgccc
      361 tgctgcctcc cgacaacgcc accggcaact tcaccaaggt cgtgcagcgc gtcccggtgc
      421 gcatccggat caccgaggga ctcggcaagg accgcccgct ccgtcccggc atgtccgtcg
      481 tcgcacacgt gtccacgcag tagacgctct tcgtatcgag gtgccatgag caccaccgcc
      541 attcggcgcg acggcgtgtc cggtgaggtg accgaccgtt ccggtctacc tgccggcgcg
      601 cgcgtcgtgg ccgaggacaa atacaagtac aagtacctga tcgccatcgc cgtgacgctg
      661 gcggcggtgc tggagctgat cgacacgtcg atcgtcaacg tcgcgatccc gcacatgatg
      721 gggaatctcg gcgcgacgct ggacgagatc tcctgggtgt cgaccggcta catcatcgcg
      781 aacgtgatcg tcattcccct gtcgagctgg ctctccggct acttcgggcg caagcgctat
      841 ctgacaggct cgatcctgct cttcgtgctg gcgtcgttct tctgcggcgc cgcgacgtcg
      901 ctgggcggcc tcgtgttctg gcgcgtggtg caggggctcg gcggcggcgc gctgctctcg
      961 acggcgcagg ccacgctgtt cgaggcgttc ccgcccaagg aggtcggcgt cggccaggcg
     1021 gtgttcggcg tgggcgtgat ggtggggccg acgatcggtc ccacgctcgg cggattcatc
     1081 gtcgacaact gggcgtggcc ctggatcttc tacatcaaca tcccgctcgg catcatcgcc
     1141 gcgttcatgg tgtggacgta cgtgcacgac tccgagcatc aggagcgggc cggcacgatc
     1201 gacggcaccg ggatcctgct gctggcgctg tgcgtcggct cgctgcaatg gatgctcgag
     1261 cgcggcgagc gctacgactg gttcgagtcg cggttcgtga cggtgctcgc cctcacgtcg
     1321 gtcacctcgt tcggattgct cctctggcgc gagctcacga tcgacgagcc tgtgatcaac
     1381 tttcgcgtgc tgctcaaccg ccagcttgcg gcgggggtga tgatcgccgc gttcctcggc
     1441 ttcgcgctct acgggagcgt tttcgtgctg ccggtgttcc tccaggggct ccacggctgg
     1501 accgcgaacc agaccggatt ggtcatcctc cccggcgcga tggcgtcggc gttcacgatg
     1561 gcgttcgtgg gacgcaacgc cgcaaggctg gacgcccgcg tgacggtgcc gatcggggcg
     1621 tcgctgttct gtctggcgat gtacaggctg tcgctcctga ccttcgacgc cggggcgagc
     1681 gacgtgttct ggccgctgat catccggggt gtcgggctgg gtttgatctt cgtgcccctc
     1741 accggcgcca cgatggccga gctcaggacg agcgagctgc cgcagggcac gggcatgttc
     1801 aacctcacgc ggcagctcgg cggctctctg ggcatcgcca tcagtgcgac gctgctgtcg
     1861 cggttcacgt cgcagtctcg cgcgctgctg gccgagcaca tcgtgatcgg cgacccggtg
     1921 gccgtggcgc gggtggacgg gatcacgcgc gcgctggtgg cgaagggaat gaacgcactc
     1981 tcggcaaagc agcaggcgct gatgattctc gaccgtcagc tccagggcca ggcgagcgtg
     2041 ctggcgttct cgaagctgta tctgctttcc ggcctggcgc tgatggcggc gatgccgctg
     2101 ctcttcctgt ttcgctcggg caagtcacga ggactgggac cgggggcggc gcactagccc
     2161 ggacgatcgc cgttcaagag tcggaggcgt agacctcgac ttccgccgtc ccgtcccgcc
     2221 cgtagcgcac gtacatcagg atcggccggc agcagacgtg gcagtcctcg atgtactcct
     2281 ggtcatcgcc gctgcccggg tcgagcgcga tctcgttcat ctcgccgcaa tgcggacagg
     2341 tgacgatcga ctccgtctcg gccgttccat cgccgagcgg aaactcgtcg tcgagatccg
     2401 ccgccgggtc gtcgtcgttc acgaaatcca ccatggacga aaggtagcgc aacgtggctg
     2461 aacgtccggc ggctgtcccc cggaactgaa acactcgcgt ccacgcgcgt ggacaccatt
     2521 ggaaggacga agcaggctaa gtagttgtca tttcgcttct tgtgacctgt gtcacccctg
     2581 gctcatgcgg tgccatccgg gttcccggac accgcacccc aaggagccca cacatgtcac
     2641 tccgtcgtcc gcgccccctc ggcgccacct ggtcgctcgc cgccgcactc ctgctcgtcg
     2701 gcgccagcgg ctgcgtcacc aagcgcgtca cgcgcatcga gcccacggcc gtcaccgatc
     2761 tgtcgggtcg gtggaacgac accgattccc gcctcgtcgc caatcagctc gtggagcaga
     2821 ccctcggcgc cggctgggcg aagcggtacg ccgacaccca tggaggcgag gcgccgaccg
     2881 tcgtcgtcgg cacgttcgcc aaccgcacga tggagcacat cgccgtcggc acgttcgtga
     2941 aggacgtcga gcgggcgctg atcaccaccg gcgcggcacg cgtcgtcgcc tcgggcgatc
     3001 agcgcgccga gatgcgcggc gaacgcgccg accagcagca gaacgcccgc gccgacaccc
     3061 gcgcgaggca gggccaggag ctcggtgccc gttacatgct cgccggcgac ctgcaggcga
     3121 tcgaggacgt ggacggtcgc gagcgcgtcg tgttctacca ggtggacgct tccctgatcg
     3181 at
//
LOCUS       DASSYW010000006         3387 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_257872, whole genome shotgun sequence.
ACCESSION   DASSYW010000006 DASSYW010000000
VERSION     DASSYW010000006.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3387)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3387)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3387
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_257872"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..695
                     /locus_tag="VFN38_00095"
     CDS             <1..695
                     /locus_tag="VFN38_00095"
                     /inference="COORDINATES: protein motif:HMM:NF016430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HET9010173.1"
                     /translation="LWNREDAEDATQEILVRVVTRLAQFDFRSGLRTWVYRVAVNYIL
                     DVKKSPIERLRLTFEQLGDDLGHGLSDAGPAETERSILVEEVKVGCTLAMLQCLDRPH
                     RLAYVFGEILEMPGPEAAEALEIRPEVFRKRLQRARQEVTRFTRAHCGLVSDDAACRC
                     HRRVPAALERGRIRSDWIDFATGAASFQEARSLVRRVEAARQALEIHRSSSPRESTVD
                     FARRIAGMFPAA"
     gene            826..1917
                     /locus_tag="VFN38_00100"
     CDS             826..1917
                     /locus_tag="VFN38_00100"
                     /inference="COORDINATES: protein motif:HMM:NF024813.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH and helix-turn-helix domain-containing
                     protein"
                     /protein_id="HET9010174.1"
                     /translation="MDFIKGELLEVIEWTDDSRDTLSWRFPDEDKAIKNGAQLIVRES
                     QVAQFVYLGQFGDTFGPGKHTLTTDNIPVLTKIKSWPYGFNSPFKADVYYVTTRLFTG
                     NKWGTANPVMLRDDDFGMVRVRAFGTYDFKVVDTKTFLREVAGSDHNFRLDEFSDTMR
                     SRIVSVFTDAIASAKVPVLDVASRYSELGDALLPLINPAVQAKYGIEIGSFIVENVSV
                     PPEVEAAIDKRSSMAAIGNLNEFVKYQMGKGFESGGGAGAAGTAAELAVGFGLAQQMM
                     KDGFAGHAAPTIAVPPIPGPLPSAAGAAPAAASAGLPELLSPADAAQALGVSEADVMA
                     VLESGDLKGKKIGSAWRISRAALTAYMSA"
     gene            1939..3042
                     /locus_tag="VFN38_00105"
     CDS             1939..3042
                     /locus_tag="VFN38_00105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010175.1"
                     /translation="MDQVLAVTKHECPACGAQAEWNPGKQKLVCPFCGTESPYQIDRD
                     TGKVAEQDLARALRELPDEARGWQTERRSVQCQSCKAVMVFDPARVGQNCEFCGSPAL
                     VSYEEIKAPLSPAGVLPFRIDTSTVRDSIRGWWRSKWLAPGRLWRTALVDTVKSLYIP
                     YWTFDAQVHCPWDAEAGHYYYVPVTMTNSKGQRVTRMERRVRWEPASGVVDHFFDDEP
                     VPGTQGLPLDLLKQIEPFPTPDVVPYDTAFLSGHVVEHYRVVLFDAAQRSVDQMNAAL
                     QQLCAQQIPGDTYRNLRIFPEFSGRTFKHVLVPVWLLSYTYGAKAFQVIVNGYTGRIA
                     GRYPKSIWKIVLLVLLAVIAALIFVMLNLDQGY"
     gene            complement(3045..>3387)
                     /locus_tag="VFN38_00110"
     CDS             complement(3045..>3387)
                     /locus_tag="VFN38_00110"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HET9010176.1"
                     /translation="NRDAASSLAMLLELDGHSVVTAHDGASAFAAADAQRPEVALLDI
                     GLPVINGVEVCRRIRQQPWGRGMILIALTGWGQAEDRSRTREAGFDGHLVKPVNYADL
                     VALLGSFSRLS"
BASE COUNT          562 a         1143 c         1137 g          545 t
ORIGIN      
        1 tgttgtggaa ccgcgaagac gcggaggatg ccacgcagga gatcctcgtg cgcgtggtca
       61 cgcgtctggc gcagttcgac tttcggagtg gcctgagaac ctgggtctac cgggtcgccg
      121 tcaactacat cctcgacgtg aagaagagcc cgatcgagcg gctgcgcctc acgttcgagc
      181 agttgggcga cgatctgggc cacggattgt cagacgcggg gccggccgag accgaacggt
      241 cgatcctggt tgaagaagtg aaggtcgggt gcacgctcgc gatgctgcag tgcctcgacc
      301 ggccgcaccg actcgcctac gtcttcggcg agatcctgga gatgccgggc cccgaggcgg
      361 ctgaggcctt ggagatccgc cccgaggtct tccgcaagcg cctgcagcgc gcgcggcagg
      421 aggtcacacg tttcacccgc gcgcactgcg ggttggtgtc ggacgacgcc gcgtgccgct
      481 gtcaccggcg cgtgccggcg gcgctcgaac gcggccgtat tcgctccgat tggattgatt
      541 tcgccaccgg ggcggcgtcg ttccaggagg cgcggtcgct cgtccgccgg gtcgaagcgg
      601 cccgccaggc cctcgagatt caccgcagca gttccccgcg tgaatcgacg gtggatttcg
      661 cgcgccgcat cgcgggcatg ttccccgcgg cgtaaacctg ctagtgtgaa catccgccgg
      721 ccggcttacg tcggaatgga ttggcgggcc tgaaggcccg cagccaccta cgtagttgca
      781 ggtcttcaga cctgcccgaa ggagagcgat cagacgatgg gcatcatgga cttcatcaag
      841 ggcgagctgc tcgaggtcat cgagtggacc gacgactccc gcgacaccct gtcgtggcgc
      901 tttcccgacg aagacaaggc catcaagaac ggcgcgcagc tcatcgtccg cgaatcgcag
      961 gtggcgcagt tcgtctacct gggccagttc ggcgacacct tcggcccggg caagcacacg
     1021 ctgaccaccg acaacattcc ggtcctcacc aagatcaagt cgtggcccta cggcttcaac
     1081 tcgccgttca aggccgacgt ctactacgtc accacgcggt tgttcaccgg caacaagtgg
     1141 ggcaccgcca atccggtgat gctccgcgac gacgacttcg gcatggtgcg cgtgcgtgcc
     1201 ttcggcacct acgacttcaa ggtggtggac accaagacgt tcctgcgcga ggtggccggc
     1261 tccgaccaca acttccgcct cgacgagttc agcgacacca tgcgctcgcg catcgtgagc
     1321 gtgttcacgg acgccatcgc ctcggccaag gtcccggtgc tcgacgtcgc ctcgcgctac
     1381 agtgagctgg gcgacgcgct gctgccgctg atcaatccgg cggtgcaggc gaaatacggc
     1441 atcgaaatcg gcagcttcat cgtggagaac gtgtcggtgc cgccggaggt cgaggccgcc
     1501 atcgacaagc ggtcgagcat ggcggccatc ggcaacctga acgagttcgt gaaataccag
     1561 atgggcaagg gcttcgaaag cggcggcggc gcgggcgccg ccggcaccgc ggccgaactg
     1621 gccgtgggct tcggcctggc gcagcagatg atgaaggacg gcttcgccgg gcacgccgcg
     1681 cccacgattg ccgtcccgcc catacccggt ccgctcccat ccgcggccgg cgcggctcca
     1741 gccgcggcat ctgccggatt gcccgagctc ctcagccccg cggacgccgc gcaggcgctc
     1801 ggcgtctccg aggccgacgt gatggcggtg ctcgaatcgg gcgatctgaa gggcaagaag
     1861 atcgggtcgg cgtggcgcat ctcgcgcgcc gcgctcaccg cctacatgtc ggcgtagtcc
     1921 agccggtctt ccctcgcgtt ggatcaagtc ctcgccgtca ccaagcacga gtgcccggcc
     1981 tgcggcgcgc aggccgagtg gaatccgggc aagcagaagc tcgtctgccc gttctgcggc
     2041 accgagtcgc cgtaccagat cgatcgggac accgggaagg tggccgagca ggatctcgcg
     2101 cgcgccctgc gcgagctgcc ggacgaagcg cgcggctggc agaccgagcg ccgcagcgtg
     2161 cagtgtcaga gctgcaaggc cgtgatggtg ttcgacccgg cgcgcgtggg acagaactgc
     2221 gagttctgtg gatcgcccgc gctcgtcagc tacgaggaga tcaaggcgcc gctctccccc
     2281 gccggcgtgc tgcccttccg catcgacacc agcacggtgc gcgacagcat ccggggctgg
     2341 tggcgcagca agtggctggc gccgggccgg ctgtggcgga cagcgctcgt ggacacggtc
     2401 aagagcctct acatcccgta ctggaccttc gacgcacagg tccactgccc gtgggacgcc
     2461 gaggccgggc actactacta cgtgccggtg acgatgacca attccaaggg gcaacgcgtg
     2521 acgcgcatgg agcggcgcgt gcgctgggag cccgcgtcag gagtggtcga tcacttcttc
     2581 gatgacgagc cggttcccgg cacgcagggg ctgccgctcg acctgctcaa acagatcgag
     2641 ccgttcccca ccccggacgt cgtgccgtac gacacggcgt tcctgtccgg gcacgtggtg
     2701 gagcactacc gagtggtgct gttcgacgct gcgcagcgct ccgtcgatca gatgaatgcg
     2761 gcactgcagc agctctgcgc gcagcagatc cccggcgaca cctaccgcaa cctgcggatc
     2821 tttccggagt tctcggggcg caccttcaag cacgtgctcg tgccggtgtg gctgctctcc
     2881 tacacctacg gcgcgaaggc gttccaggtg atcgtcaacg gctacaccgg gcgcatcgcc
     2941 ggacggtatc cgaagagcat ctggaaaatc gtgctcctcg tgctgctggc cgtgatcgcc
     3001 gcgttgattt tcgtgatgtt gaacctggat cagggctact gagactacga gagccggctg
     3061 aaggacccga gcagcgcgac caggtcggcg tagttgaccg gcttcacgag gtgaccgtcg
     3121 aagccggcct cccgcgtccg cgaccggtcc tcggcctgcc cccaaccggt cagcgcgatc
     3181 aggatcatgc cgcgtcccca cggctgctgg cggatgcggc ggcacacttc gacgccgttg
     3241 atcaccggca gcccgatatc gagcagcgcc acttctggcc gctgcgcgtc cgcggcggcg
     3301 aaggccgacg caccgtcatg cgccgtcacc accgagtgac catcgagctc cagcagcatc
     3361 gcgagtgacg acgcggcgtc gcggttg
//
LOCUS       DASSYW010000007         2923 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1289302, whole genome shotgun sequence.
ACCESSION   DASSYW010000007 DASSYW010000000
VERSION     DASSYW010000007.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2923)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2923)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2923
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1289302"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..749)
                     /locus_tag="VFN38_00115"
     CDS             complement(<1..749)
                     /locus_tag="VFN38_00115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HET9010177.1"
                     /translation="MAAPVVSSDHAASARAAADSRQALEALSPPDAPLAGFSGTRRVP
                     PPVNEPVRSYAPGSPEKLALKARLASMARERVDIPIIIGGREIRTGDTAQSVMPHDHA
                     HVLADWHRATPAHVQQAIEAARRAGADWANWAWEDRAAVFLRAAELLTTTWRQTINAA
                     TMLNQSKTAFQAEIDSACELIDFWRFNPHYAQELYAEQPLSNSTMWNQLDYRPLEGFV
                     WAVTPFNFTSIAGNLPTSPALMGNTVLWKPAS"
     gene            878..1690
                     /locus_tag="VFN38_00120"
     CDS             878..1690
                     /locus_tag="VFN38_00120"
                     /EC_number="3.2.1.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="sialidase family protein"
                     /protein_id="HET9010178.1"
                     /translation="MCRPTRHRVPLARPLLVAAIVLGACAAPPVDWRPATAVARIRGE
                     GVALTADGAVRPDSIGRLAPHVAAPPGPVCASSLRLASARGTVFGVWWAPRPDSGARL
                     LAARSTDGGRSWSAPAAVDTTDAGVAGCRREPASIAADSASGYVHVAYALQGVEGPGL
                     FFSESMDGGVTFHAPVPILYGERLGATSVAADGDLVVVAFEDPNSSTPRIGLALSRTM
                     GHIFEQRILPVSDDNDRAVHPLVAVAGRRVAVAWEPSGGDSDMLTVRAGIVR"
     gene            1699..2379
                     /locus_tag="VFN38_00125"
     CDS             1699..2379
                     /locus_tag="VFN38_00125"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HET9010179.1"
                     /translation="MRVLLADDDVIARTLLCAVLADFSHDVVIAEDGERAWELFQEAP
                     APLVVLDINMPGLDGLTVCRLIRGHAAGRETFVLVVTARDGRDDLTAVLAAGADDYVT
                     KPTSPENLHARLEIAGQRIVQNAASRAAEAELARSRWLAGIGETTIAIEHEINNPLSA
                     LLGHTELLLMEEGGMNDEQKDSLRIIQEQATRIADVVRRLARLKNPQSVEYLAGSRML
                     DLGMRPKT"
     gene            2393..>2923
                     /locus_tag="VFN38_00130"
     CDS             2393..>2923
                     /locus_tag="VFN38_00130"
                     /inference="COORDINATES: protein motif:HMM:NF013429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIM barrel protein"
                     /protein_id="HET9010180.1"
                     /translation="MEHYFGAHTVDTGGIHMAARRAANADMRALQIFSAIPKYYNDRV
                     SVRPERVARFRETIAETKIAPERIVVHAAYVLNTATPDEAKWLRARDGLAKELERSTA
                     LGVGAVCFHPGAATDGDREAAAERIATAIIHALETVKGDTRVLVENTAGAGSTMARTP
                     EEVGAILAHVPKRLRGR"
BASE COUNT          402 a         1032 c         1087 g          402 t
ORIGIN      
        1 gacgcgggct tccagaggac ggtgttgccc atgagcgcgg gcgaggtggg caggttgccc
       61 gcgatcgagg tgaagttgaa cggcgtcacc gcccagacga agccctcgag cggccggtag
      121 tccagctggt tccacatcgt gctgttcgag agcggctgct cggcgtagag ctcctgcgcg
      181 tagtgcgggt tgaagcgcca gaaatcgatc agctcgcacg cggagtcgat ctccgcctgg
      241 aacgcggtct tcgactggtt gagcatcgtc gcggcattga tcgtctggcg ccacgtcgtg
      301 gtcagcagct cggccgcgcg caggaacacc gcggcgcgat cctcccacgc ccagttcgcc
      361 cagtcggcgc cggcccgcct ggccgcctcg atcgcctgct gcacgtgcgc cggcgtcgcc
      421 ctgtgccagt cggcgagcac gtgcgcatgg tcgtggggca tgacgctctg cgcggtgtcg
      481 ccggtgcgga tctcccgccc accgatgatg atggggatgt cgacgcgctc cctggccatg
      541 ctcgccagcc gcgccttgag cgcgagcttc tcgggcgagc cgggtgcgta gctgcgcacc
      601 ggctcgttga ccggcggagg cacgcggcgc gtgccggaga agccggcgag cggcgcgtcg
      661 ggtggcgaga gcgcctcgag cgcctggcgc gagtcggccg cggcgcgagc ggatgctgcg
      721 tggtcggagg agacgacggg agcggccatg gggagtgaca ggtgcgggtg acgagggcga
      781 cgcctccggc gcggagccgg cccccgcaag ataatccacc gactcggcaa ctcgtgccgt
      841 cgcttctccg cctcgggtgc cgccgctatt gtccggcatg tgccgcccaa cgcgccaccg
      901 cgtcccgctc gcgcggcccc ttctcgtggc cgccatcgtg ctcggcgcct gcgcggctcc
      961 tccggtggac tggcggccgg cgaccgccgt cgcgcgcatc cggggcgagg gcgtggcact
     1021 gaccgccgac ggcgccgtac ggccggattc gatcggccgg ctggcgccgc acgttgcggc
     1081 gccgccgggt ccggtgtgcg cgagctcgct gcggctcgcg tcagcgcgcg gcacggtgtt
     1141 cggcgtgtgg tgggcgccgc gtcccgacag cggggcgcgc ctgctggcgg cgcggtcgac
     1201 ggacggcggg cgaagctgga gcgcccccgc cgccgtggac acgacggacg ccggtgtcgc
     1261 cggctgccgc cgcgagccgg cgtcgatcgc cgccgactcc gcgagcggat acgtgcacgt
     1321 cgcctatgcg ctgcagggcg tcgaagggcc cggcctcttc ttctcggagt ccatggacgg
     1381 cggggtcacc tttcacgcac cggtgccgat cctctatgga gagcgcctcg gcgccaccag
     1441 cgtcgccgcc gacggcgacc tggtcgtggt cgccttcgag gatccgaaca gctcgacgcc
     1501 acgcatcggt ctcgccctgt cgcgcaccat gggacacatc ttcgagcagc gcatcctgcc
     1561 cgtctccgac gacaacgacc gcgccgtgca ccccctcgtg gccgtcgccg gccggcgtgt
     1621 cgccgtcgcg tgggagccga gtggtggcga cagcgacatg ctcaccgtgc gcgccggcat
     1681 cgtgcgctga ccgagcccat gcgcgtactc ctcgccgacg acgacgtcat cgcccgcacg
     1741 ctcctctgcg ccgtgctggc cgatttcagc cacgacgtcg tgatcgcgga ggatggcgag
     1801 cgcgcgtggg agctgttcca ggaagccccg gcgccgctcg tggtgctcga catcaacatg
     1861 ccggggctcg acgggctcac ggtgtgccgg ctgattcgcg gccacgcggc ggggcgcgag
     1921 acgttcgtgc tcgtggtgac ggcccgcgac ggacgcgacg acctcacggc cgtgctcgcg
     1981 gcgggcgccg acgactacgt gacgaagccc acctcgccgg agaacctgca cgcgcggctc
     2041 gagatcgccg gacagcgcat cgtgcagaac gcggcgagcc gcgccgccga ggcggagctg
     2101 gcccggtcgc gatggctggc cggcatcggc gagacgacga tcgcgatcga gcacgagatc
     2161 aacaacccgc tgtccgccct cctcggccac accgagctgc tgctgatgga ggagggcggc
     2221 atgaacgacg agcagaagga ctcgctgcgc atcatccagg agcaggcgac gcgcatcgcc
     2281 gacgtggtgc gccggctggc gcggctcaag aatccccagt cggtggagta tctcgccggc
     2341 tcgcgcatgc tcgatctcgg catgcgaccc aagacctgat cggaggcggc aggtggagca
     2401 ctacttcggg gcgcacaccg tggacacggg cggcattcac atggcggcgc gccgcgcggc
     2461 caacgccgac atgcgggccc tgcagatctt ctcggcgatt cccaagtact acaacgaccg
     2521 ggtgagcgtg cgaccggagc gcgtcgcgcg ctttcgcgag acgatcgccg agacgaagat
     2581 cgcgccggag cggatcgtcg tgcacgccgc gtacgtcctc aacacggcga cgccggacga
     2641 ggccaagtgg ctgcgcgccc gcgacggact ggcgaaggag ctcgagcgct cgacggcgct
     2701 cggggtggga gcggtgtgct tccaccccgg tgccgccacc gacggcgatc gcgaggccgc
     2761 ggcggagcgg atcgccaccg cgatcatcca tgcgctggag acggtgaagg gcgacacgcg
     2821 ggtgctcgtc gagaacaccg cgggggccgg cagcacgatg gcccgcacgc ccgaggaggt
     2881 gggcgcgatc ctcgcgcacg tgccgaagcg cctgcgcggg cgc
//
LOCUS       DASSYW010000008         2404 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1123640, whole genome shotgun sequence.
ACCESSION   DASSYW010000008 DASSYW010000000
VERSION     DASSYW010000008.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2404)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2404)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2404
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1123640"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..515)
                     /gene="rph"
                     /locus_tag="VFN38_00135"
     CDS             complement(<1..515)
                     /gene="rph"
                     /locus_tag="VFN38_00135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004549 - tRNA-specific ribonuclease
                     activity [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HET9010181.1"
                     /translation="MTLERGVALYAEGSCLVSFGETRVLCTASVEDGVPGWRRGRGEG
                     WLTAEYAMLPRATKTRTSRERGQVGGRTQEIQRLIGRSIRAMLDDFAWGEYTLKIDCD
                     VLQADGGTRTAAITGAAVAAADAFAWMVARGKLKRTPVKRLVAGVSVGVVRGETRLDL
                     EYIEDVVADVD"
     gene            complement(556..1038)
                     /gene="rfaE2"
                     /locus_tag="VFN38_00140"
     CDS             complement(556..1038)
                     /gene="rfaE2"
                     /locus_tag="VFN38_00140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose 1-phosphate
                     adenylyltransferase"
                     /protein_id="HET9010182.1"
                     /translation="MRDPAAKVRDWAAAARWREGRSGRVVFTNGVFDLLHPGHVDVLL
                     GARRAGDHLIVGLNSDDSVRRLKGEERPVRSEAERAYVLAAFEMVDCVVLFEQDTPLE
                     LIRVLRPDVLVKGGDYREETIVGAPDVRGWGGDVRVIPLTPGQSTTNIIRILRGSTAR
                     "
     gene            complement(1053..1406)
                     /locus_tag="VFN38_00145"
     CDS             complement(1053..1406)
                     /locus_tag="VFN38_00145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010183.1"
                     /translation="MVRRRTGRGSLGCLTTLLIVAAIVYFGVNAGEVYFRFYQFQDAM
                     RQEVRFAAHNSDSQILRHLRAQADSLGLPEAAGLISLQRDGRHIEIESDYYEHIELPG
                     MVREVHFNPHAEGIF"
     gene            complement(1400..1933)
                     /gene="lptE"
                     /locus_tag="VFN38_00150"
     CDS             complement(1400..1933)
                     /gene="lptE"
                     /locus_tag="VFN38_00150"
                     /inference="COORDINATES: protein motif:HMM:NF016290.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_process: GO:0043165 - Gram-negative-bacterium-type cell
                     outer membrane assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS assembly lipoprotein LptE"
                     /protein_id="HET9010184.1"
                     /translation="MPFLRSIQRSGVCSSLRLLLPLVLLASACVTRYGFAGGGLPPHI
                     RTMAILPFENETPAAELQRELFEAMRRDFQPRLGVRDAPQERADALVRGIIRTYDVDV
                     PASYTANQAQASASRRRLQIVLDVEIVDQTNGKTIFERKGLRAEGEYAERDEAGGRRD
                     AIKRIVNDMVEGAQSQW"
     gene            complement(1890..>2404)
                     /locus_tag="VFN38_00155"
     CDS             complement(1890..>2404)
                     /locus_tag="VFN38_00155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010185.1"
                     /translation="GNRQVVFKWELRDGDMNARGDGVARIASPDSVRLDFFLGGGFGG
                     GSAVLIGDSLQAPGPDAARRLIPPRALLWAALGRLDIPTEPDTLVRVDAGVLRADIGA
                     PVRWRVTFHGDTLTRLERVDGGRLQEWVERAADQSVQYRNEAARRTLSLVIQRSDAVP
                     PFDPAIWRLF"
BASE COUNT          357 a          870 c          830 g          347 t
ORIGIN      
        1 atgtccacgt ccgccacgac gtcctcgatg tactcgaggt cgagccgggt ctcgccgcgc
       61 accacgccca cgctcacgcc ggcgaccagg cgcttcacgg gggtgcgctt gagctttccg
      121 cgcgccacca tccacgcgaa cgcatcggcc gcggccacgg ccgcacccgt gatggccgcg
      181 gtgcgggttc ccccgtcggc ctgcagcacg tcgcagtcga tcttgagcgt gtactcaccc
      241 cacgcgaagt cgtcgagcat cgcccggatg cttcggccga tgagccgctg gatctcctgg
      301 gtgcgtccgc ccacctgccc ccgctcgcgc gacgtgcgcg tcttcgtggc gcgggggagc
      361 atcgcgtatt ccgcggtgag ccatccctcg ccgcggccgc ggcgccaccc gggcacgccg
      421 tcctccaccg acgcggtgca gagcacgcgg gtctcgccga acgacaccag acacgagccc
      481 tcggcgtaga gcgcgacccc gcgctcgagc gtcacgggac gaagcgagtc ggccgagcgg
      541 ccgacgcgaa cgggatcagc gggcggttga gccacgaagg atgcggatga tgttggtggt
      601 ggattggccg ggagtgaggg ggatgacacg gacatcgccc ccccagcctc gaacgtcggg
      661 ggcgccgacg atggtctcct cgcggtagtc gccccccttc acgagcacgt cgggacgtag
      721 cacccggatg agctcgagcg gcgtgtcctg ctcgaacagt accacgcagt ccaccatctc
      781 gaaggcggcg agcacgtagg cgcgctcggc ctcgctgcgc acggggcgct cctcaccctt
      841 gagccggcgg accgagtcgt cgctgttcag cccgacgatc agatggtccc cggcgcggcg
      901 cgcccccagc aggacgtcga cgtgtcccgg gtgcagcagg tcgaacacgc cgttggtgaa
      961 gacgacgcgt cccgagcggc cctcacgcca tcgcgccgcc gcggcccagt cgcgcacctt
     1021 cgcggccggg tcgcgcaccg tgccgccgtt ggtcaaaaga tgccttcggc gtgcgggttg
     1081 aagtggacct cccgcaccat gcccggcagc tcgatgtgct cgtagtagtc cgactcgatc
     1141 tcgatgtggc gaccgtcgcg ctgcagcgag atgagccccg ccgcttccgg caggcccagg
     1201 gagtcggcct gcgcccgcag atggcggagg atctggctgt cgctgttgtg ggcggcgaag
     1261 cgcacctcct gccgcatcgc gtcctggaac tggtagaagc ggaagtagac ttcgccggcg
     1321 ttcacgccga aatacacgat cgccgcgacg atgagcagcg tcgtgaggca tccgaggctc
     1381 ccgcgtcccg tccgtcgtct caccattgcg attgcgctcc ctcgaccatg tcgttgacga
     1441 tgcgcttgat cgcatcgcgg cggccgcccg cctcgtcgcg ctcggcatat tccccctcgg
     1501 cgcgaagtcc cttccgctcg aagatcgtct tcccgttggt ctgatccacg atctccacgt
     1561 ccaggacgat ctggaggcgc cgccgcgacg cgctcgcctg cgcctggttc gccgtatagc
     1621 tcgccggcac gtccacgtcg taggtgcgga tgatgccgcg caccagcgcg tcggcgcgct
     1681 cctgcggcgc gtcgcgcacg cccaggcggg gctggaagtc gcgccgcatc gcctcgaaca
     1741 gctcccgctg cagctcggcg gccggcgtct cgttctcgaa cgggaggatg gccatcgtgc
     1801 ggatgtgcgg cggcagcccg ccgccggcga agccatagcg cgtcacgcac gccgaggcga
     1861 gcaggacgag cggaagcagc aggcgaaggc tagaacagac gccagatcgc tggatcgaac
     1921 ggaggaacgg catcggagcg ttgaatgacg agcgacagcg ttcggcgggc ggcttcgttg
     1981 cggtactgca ccgactggtc ggccgcgcgc tccacccact cctggagccg tccgccgtcg
     2041 acccgctcga gccgggtgag ggtatcgccg tggaaggtga cgcgccagcg aaccggtgca
     2101 ccaatgtcgg cgcggagcac gcccgcgtca acgcgcacga gggtatccgg ctccgtcggg
     2161 atgtccaggc ggccgagcgc agcccacagc agcgcgcgcg gggggatgag tcgccgcgct
     2221 gcgtcggggc cgggcgcctg gagcgaatcg ccgatgagga cggccgagcc gccgccgaac
     2281 ccgcccccga ggaagaagtc gagccggacg ctgtccggcg acgcgatccg cgccacgccg
     2341 tcgccccgcg cgttcatgtc gccgtcccgc agctcccact tgaaaacgac ctgacggttg
     2401 ccgt
//
LOCUS       DASSYW010000009         2443 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_515331, whole genome shotgun sequence.
ACCESSION   DASSYW010000009 DASSYW010000000
VERSION     DASSYW010000009.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2443)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2443)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2443
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_515331"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..493)
                     /locus_tag="VFN38_00160"
     CDS             complement(<1..493)
                     /locus_tag="VFN38_00160"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HET9010186.1"
                     /translation="MTPGSSTYLVAHEVSYAYPRRGKGAVVPAVSNVSLSVARGSFTG
                     LLGPNGCGKTTLLKLMAGVLRPVSGSVTLEGRSLADMPRRAAARHMAVVPQDTHPAFD
                     YTALEMVLMGRHPHLGTFELEGPTDLALARDALAATGTEHLGGRAYMTLSGGEKQRVV
                     IASA"
     regulatory      complement(521..728)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
     gene            775..1911
                     /gene="mqnE"
                     /locus_tag="VFN38_00165"
     CDS             775..1911
                     /gene="mqnE"
                     /locus_tag="VFN38_00165"
                     /inference="COORDINATES: protein motif:HMM:TIGR03700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009234 - menaquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminofutalosine synthase MqnE"
                     /protein_id="HET9010187.1"
                     /translation="MQARLRAAGLADIDEKLQSSGRLTLEDGVRLFETPDLLAVGYLA
                     NREREKRHGARTYFNYNLRLEPTNVCEATCLFCSFSRLQEGMPEAYTMSLEQAWDKLR
                     QRANQPLTEVHVVNGLNPHLPFSYYTELLRGFKRIRPSIHLKCFTAVEIAYFSQLYGM
                     TDEQVLRELKDAGLDSLPGGGAEIFAERVRRKICHDKADADRYLSIHRIAHRMGLRTN
                     VTMLYGHIETMEERVDHMLRARALQDETGGFQAFIPLAFHPDNNQMRKLPAPTGTDTL
                     RVHAVSRLMCDNIPHIKAFWIATGLEMAQAALWFGVDDLDGTVQEEKIYHMAGSPTPE
                     GMTTAGLTRLVRAAGREPYERDTLYNIVNVPALETPDAAYSSPA"
     gene            1961..>2443
                     /locus_tag="VFN38_00170"
     CDS             1961..>2443
                     /locus_tag="VFN38_00170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010188.1"
                     /translation="MTLTLRMRTATAIAALTVAYTLVITAAPALAQQADARGRGDGRG
                     PGRGFGGFVQSNDPRVQNRTYHFADTNEDLPYCLFVSSKVSKDKKAPLIVSLHGLGVG
                     PGIMCRGKAIDLAEEGGYIFVAPMGYSVGGWYGSPVITFDGRRGGGPPAPPPPANLPE
                     L"
BASE COUNT          413 a          853 c          796 g          381 t
ORIGIN      
        1 acgcgctggc aatgacaacc cgctgtttct cgccgccgct gagtgtcatg taggcgcgtc
       61 caccgaggtg ttcggtgccc gtagcggcga gcgcgtcgcg cgccagcgcg aggtcggtcg
      121 gtccttcgag ctcgaacgta ccaagatgcg ggtggcggcc catcagcacc atttcgagcg
      181 cggtgtagtc gaacgccgga tgagtgtcct gcggcaccac cgccatgtgg cgtgccgccg
      241 cgcgccgcgg catgtcggcg agcgagcgcc cttcgagcgt cacgctcccc gagaccggcc
      301 gcagcacgcc ggccatcagc ttcaggagcg tcgtcttgcc gcagccgttc ggcccgagca
      361 ggcccgtgaa cgagccgcgc gccaccgaca gactgacgtt cgacacggcg ggcacgacgg
      421 cgcccttccc gcggcgtgga tacgcgtacg aaacctcgtg cgcgacaaga tacgtcgatg
      481 aacctggggt catatctccc tccagcgtcc ttcgcgctgg aacaaggaac gtcaaaccgg
      541 ggagaggtct cctggctcgc ggagcaatcg agcggtgcgg ctggtcttcc cgcgcgtctg
      601 ccggcgatgc ggccgtttcg cgcagtgacg tagggcgccg aacctctccg cttacagtgg
      661 cgggaccgcg tgggcctttc acccacttcc ctgttcaccc ggcggtgtct ggtaccgccc
      721 ggagtatacc ccgggcaccg ggcccggccc gatcacgata aaattgaagg tctcgtgcag
      781 gcacgcctcc gcgcggccgg actggccgat atcgacgaga aactccagag ttccgggcgt
      841 ttgacgctcg aggacggcgt ccgtctgttc gagacgccgg acctgctggc cgtcggctac
      901 ctggccaacc gcgagcgcga aaagcggcac ggcgcgcgca cctacttcaa ctacaacctg
      961 cggctcgaac cgacgaacgt gtgcgaggcc acgtgcctct tctgctcgtt ctcgcgcctg
     1021 caggaaggca tgcccgaggc gtacacgatg tcgctcgagc aggcctggga caagctgcgg
     1081 cagcgcgcca accagccgct gaccgaggtg cacgtcgtca acggcctgaa cccgcacctt
     1141 ccgttcagct actacacgga gctgctgcgc ggcttcaaac gcatccggcc gtcgattcac
     1201 ttgaagtgct tcacggccgt cgagatcgcg tacttctcgc agctctacgg catgaccgac
     1261 gagcaagtgc tgcgggagct gaaggacgcc ggcctcgact cgctgcccgg cggcggcgca
     1321 gagattttcg ccgaacgcgt gcgccggaag atctgtcacg acaaggccga cgcggatcgt
     1381 tatctctcga ttcaccgcat cgcgcaccgc atggggctgc gcaccaacgt cacgatgctc
     1441 tacgggcaca tcgagacgat ggaagagcgc gtcgatcaca tgctgcgcgc ccgcgcgctg
     1501 caggacgaaa ccggcgggtt ccaggcgttc atcccgctgg cgttccatcc ggacaacaac
     1561 cagatgcgga agctgccggc gccgaccggc accgacacgc tgcgcgtgca cgcggtgtcg
     1621 cggttgatgt gcgacaacat tccgcacatc aaggcgttct ggattgcgac cggactcgag
     1681 atggcgcagg cggcgctgtg gttcggggtg gacgacctgg acggaaccgt gcaggaagag
     1741 aagatctacc acatggccgg atcgcccaca cccgagggaa tgacgacggc cggcctcacg
     1801 cgcctcgtgc gcgcggcggg gcgcgaaccc tacgagcgcg acacgctcta caacatcgtc
     1861 aacgtcccgg cgctcgaaac tcccgacgcc gcgtattcct ctccggcata accgatattc
     1921 aactctgggc agcgggcgcg gcgcgatagg atgcgcggcc atgacgctca ctctccgcat
     1981 gcgaaccgcg acggcgattg ccgcgctgac ggtcgcgtac accctcgtca tcacagcggc
     2041 tcccgcgctc gcccagcagg ctgacgcgcg cggccgcggc gacggccgtg gccccggccg
     2101 cgggtttggc ggcttcgttc agtccaacga tccccgcgtc cagaaccgga cctatcactt
     2161 cgcggacacc aacgaggatc tgccgtactg cctgttcgtg tcctcgaagg tctcgaagga
     2221 caagaaggcg ccgctcatcg tctcgctgca cggcctgggc gtcgggcccg gaatcatgtg
     2281 ccgtggcaaa gccatcgacc tggccgagga gggcggctac atcttcgtgg cgcccatggg
     2341 ctacagcgtc ggcgggtggt acggctcgcc cgtgatcaca ttcgacggac ggcggggcgg
     2401 cgggcccccg gctccgcccc cgcccgccaa cctcccggag ctg
//
LOCUS       DASSYW010000010         5246 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1178599, whole genome shotgun sequence.
ACCESSION   DASSYW010000010 DASSYW010000000
VERSION     DASSYW010000010.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 5246)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5246)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5246
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1178599"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..459
                     /locus_tag="VFN38_00175"
     CDS             <1..459
                     /locus_tag="VFN38_00175"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013362.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RsmB/NOP family class I SAM-dependent RNA
                     methyltransferase"
                     /protein_id="HET9010189.1"
                     /translation="ENVVRLEASNIIPFVGDALHPPLAEVDAVLVDAPCTGTGTFRRH
                     PDARWRLKASDFAVLPSLQRAILRAAASIVRPGGLLIYSTCSLELEENDEQVATFLSE
                     HPDWTLDAPPSGVVPDTVLDEGLLRVLPQQHGTDGAFAARFRRPRTGAAA"
     gene            456..1196
                     /locus_tag="VFN38_00180"
     CDS             456..1196
                     /locus_tag="VFN38_00180"
                     /inference="COORDINATES: protein motif:HMM:NF015734.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PASTA domain-containing protein"
                     /protein_id="HET9010190.1"
                     /translation="MSWRSRVRTSLVYLVSILAGFSLAWLIVAFVVFPTGVVPRDVKV
                     PNVTGLMYDEAEQRLAQAGFKAEKGEQRFNNSAPKLTVLEQTPAPGTREGIGSAVTLV
                     VSGGQRIATVPTVTGMSRIEAQVRLEQDGFDVGDTGETNSDAPRGTVVGTRPAAGAQV
                     TVPSTITLILSRGAEAASTQMPSLMGRDVSGARMVLSQIGVKDVVVTWDPMATGASGT
                     VVGQSPVPGATILPGASVQLRVAGVETP"
     gene            1193..1861
                     /gene="rpe"
                     /locus_tag="VFN38_00185"
     CDS             1193..1861
                     /gene="rpe"
                     /locus_tag="VFN38_00185"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004750 - D-ribulose-phosphate 3-epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HET9010191.1"
                     /translation="MSAVRIAPSILSADFAQLGTDVAMLEAAGAAWIHVDVMDGRFVP
                     NLTFGAKVIESVRRRTSLPLDVHLMVVEPERYFDDFVAAGASGLTIHAEVSPHLHRQL
                     ARIRELGVRAGVALNPSTPLSAVEEVLGQLDLLLVMSVNPGFGGQTFIPESVGKIARA
                     RRMLDDAGSRAALEVDGGINRDTIAECWRAGADTFVAGNAVFSAADPGAEIAALRGLC
                     AHRA"
     gene            1872..2429
                     /locus_tag="VFN38_00190"
     CDS             1872..2429
                     /locus_tag="VFN38_00190"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HET9010192.1"
                     /translation="MTVRQQWTIVLGIVALLGVLLAAATHFLGDELFPVSVGSAAPPM
                     QAATLDGTKRVKTLDDYKGKVVLLNVWATWCEPCRVEMPSIEKLHREFGPHGLAVVAV
                     SVDDAGMEDRIRDFAKELGITFEVLHDPTRVTSTNYQITGYPETFVIGREGSIRKKVI
                     GAADWSSEANRALIRELLGPVTASR"
     gene            2437..3144
                     /locus_tag="VFN38_00195"
     CDS             2437..3144
                     /locus_tag="VFN38_00195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010193.1"
                     /translation="MTPPWNGAPGTTQGWRRRLRAAFVERLGLKATALVIAVLLWFVV
                     GARQPTETHIMVGLSPELDSSLVLLGEPPRVRALVAGRASDLAKLYAMPPVIRRTVSG
                     DAPDTLVLDLLPGDVRIPADLKSDVRVLDIEPRRVTLRFETRASRRVAVVNAGRVSIA
                     GGAARVEFDPETVRITGPRRVVRALRGISPAALTIAADDTLPHIAELDTAGLGGLRVS
                     PAQVKVRATAPAAPATP"
     gene            3141..4178
                     /gene="tsaD"
                     /locus_tag="VFN38_00200"
     CDS             3141..4178
                     /gene="tsaD"
                     /locus_tag="VFN38_00200"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: protein motif:HMM:TIGR03723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HET9010194.1"
                     /translation="MTRILGIETSCDETSAAVLAGDGDVATLESLVILSQDVHRIFGG
                     VVPEIASRHHLTAIVPVVRQALADAKVELDGVDAVAVTNAPGLVGALLVGVSFAKAIA
                     HGRGIPCVGVHHMEGHLFATALEHRDAVPPFTALLVSGGHTLLVDVEAWGRYRLLGRT
                     RDDAAGEAFDKVAKLLGLPYPGGPHVERLAREGEPGRFRFARPMLRRNQQPGDDDYYD
                     VSFSGLKTAVLHAVRGGTPEDAPHIARGFHDALVDTLVEKTARAVERFGRTRVVLGGG
                     VAGNRTLADAMRARMRRAGAEVYAPSPRLATDNAAMIARAGLFHLERGERAPLDLNAF
                     ASLPLPGLVTA"
     gene            4175..5023
                     /locus_tag="VFN38_00205"
     CDS             4175..5023
                     /locus_tag="VFN38_00205"
                     /EC_number="2.4.99.-"
                     /inference="COORDINATES: protein motif:HMM:NF013915.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA];
                     GO_process: GO:0042158 - lipoprotein biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase family
                     protein"
                     /protein_id="HET9010195.1"
                     /translation="MTLLPDPIVHHPFAYELGPIQITGFGIAILMCFVVAQVVAQQEL
                     ARRGHDPEPISDMVFAALIGGLLGAKLYYVVVLGHWDSFFDRGGFVYWGGLIGGMLAV
                     MAVVVKKRVGLMKMFDVSAPALAAAYAVGRTGCWAVGDDYGRPWKGFLAVAFPEGAPP
                     STAGIMARDFGIAMPAGANPMTVLSVYPTQLYEVAMGLVMFAILWRLRDHEHAEGWLF
                     GVYAVLSGLERFVIEFFRAKDDRFVAGLTYAQLISVGFIVLGVVFMAWRWRVGGNKRG
                     IHAVGM"
BASE COUNT          688 a         1893 c         1900 g          765 t
ORIGIN      
        1 gagaacgtgg tgcggctcga ggcctcgaac atcatcccct tcgtgggcga cgcgctgcat
       61 ccgcccctcg ccgaggtgga cgccgtgctc gtggacgcgc cctgcaccgg cacgggcacc
      121 ttccgccggc atcccgacgc gcggtggcgg ctcaaggcga gcgacttcgc cgtcctcccg
      181 tcgctccagc gtgccatcct ccgcgccgcc gcgtccatcg tgcggccggg cggcctgctg
      241 atctacagca cctgctcgct cgaactcgag gagaacgacg agcaggtcgc gacgttcctg
      301 tccgagcatc ccgactggac gctggacgcg ccgccgagcg gcgtggtgcc cgacaccgta
      361 ctcgacgagg gtcttctgcg cgtacttccc cagcagcacg gcaccgacgg cgcctttgcc
      421 gcgcgcttcc gccgcccccg caccggagcc gccgcatgag ctggcgctcc cgggtccgga
      481 cgtcgctcgt ttatctcgtg agcatcctcg cgggcttctc gctcgcgtgg ctcatcgtcg
      541 ccttcgtcgt gttccccacg ggcgtcgtcc cgcgcgacgt gaaggtgccc aacgtcacgg
      601 ggttgatgta cgacgaggcc gagcagcggc tcgcccaggc gggcttcaag gccgagaagg
      661 gcgagcagcg cttcaacaac agcgcgccca agctcaccgt gctggaacag acgccggcgc
      721 cgggcacgcg cgaggggatc ggcagcgcgg tgaccctcgt cgtgagcggg ggccagcgca
      781 tcgccaccgt gcccaccgtc acggggatgt cgcgcatcga ggcgcaggtg cgcctggagc
      841 aggacggctt cgacgtcggc gacaccggcg agacgaacag cgacgcgccg cgcggcaccg
      901 tcgtgggcac gcggccggcc gcgggcgccc aggtgaccgt gcccagcacg atcacgctca
      961 tcctcagccg cggcgccgag gcggcttcca cgcagatgcc cagcctgatg ggccgcgacg
     1021 tgagcggcgc gcggatggtg ctgtcgcaga tcggcgtgaa ggacgtggtg gtcacctggg
     1081 acccgatggc gaccggcgcg tccggcacgg tcgtcgggca gtcgccggtg cccggcgcca
     1141 ccatcctgcc cggcgcgtcg gtgcagctcc gcgtcgccgg cgtggagacg ccgtgagcgc
     1201 cgtccgcatc gccccctcca tcctcagcgc ggacttcgcg cagctcggca ccgacgtcgc
     1261 catgctggaa gcggcgggcg ccgcgtggat ccacgtcgac gtgatggatg ggcgcttcgt
     1321 ccccaacctg accttcggcg cgaaagtcat cgagtcggtg cgccgccgca cctcgctccc
     1381 gctcgacgtg cacctgatgg tcgtggagcc cgagcgctac ttcgacgact tcgtcgcggc
     1441 cggcgcgtct gggctcacga tccatgcgga ggtgtcgccg cacctgcacc ggcagctcgc
     1501 gcgcatccgc gagctcggcg tccgggcggg agtcgcgctc aatccgtcca ccccgctgtc
     1561 ggcggtggag gaggtgctcg gccagctcga cctcctgctg gtgatgtcgg tgaaccccgg
     1621 cttcggcggg cagacgttca tcccggagtc ggtgggcaag atcgcgcgcg cgcggcgcat
     1681 gctcgacgac gccggcagcc gcgccgccct ggaggtggac ggcggcatca accgcgacac
     1741 gatcgccgag tgctggcgcg ccggcgcgga caccttcgtc gccggcaacg cggtgttcag
     1801 cgccgccgat ccgggcgccg agatcgcggc gctgcgcggc ctgtgcgcgc accgggcgtg
     1861 agcgcgcggc catgacggtg cgccagcagt ggacgatcgt gctcggcatc gtggcgctgc
     1921 tcggcgtgct gctcgccgcg gccacccact tcctgggcga cgagctgttt cccgtgtcgg
     1981 tcggctccgc ggcgcccccc atgcaggcgg cgacgctgga cggcacgaag cgcgtgaaga
     2041 cgctcgacga ctacaagggg aaggtcgtgc tgctcaacgt gtgggccacc tggtgcgagc
     2101 cgtgccgggt cgagatgccg agcatcgaga agctgcaccg cgagttcggg ccgcacgggc
     2161 tcgccgtcgt ggcggtgagc gtggacgacg ccggcatgga ggatcgcatc cgcgacttcg
     2221 cgaaggagct cggcatcacc ttcgaggtcc tgcacgaccc gacgcgggtc acgtcgacga
     2281 actaccagat caccggttat ccggagacct tcgtcatcgg ccgcgagggg tccatccgca
     2341 agaaggtgat cggcgcggcg gactggagct ccgaggccaa ccgcgcgctg atccgcgagc
     2401 tgctcggccc cgtcaccgcg tcgcgctgag ggcaccatga cccctccctg gaatggcgca
     2461 cccgggacga cccagggctg gcgccggcgg ctgcgcgcgg cgttcgtcga gcggctcggc
     2521 ctcaaggcga ccgccctcgt gatcgccgtg ctgctctggt tcgtcgtcgg cgcgcgccag
     2581 cccaccgaga cccacatcat ggtgggcctc agcccggagc tggacagctc gctggtgctg
     2641 ctgggcgagc cgccgcgcgt gcgggcgctc gtcgccggcc gggcgtccga tctcgccaag
     2701 ctgtacgcga tgccgccggt gatccgccgc accgtgagcg gcgacgcgcc cgacaccctc
     2761 gtgctcgacc tcctgccggg cgacgtccgg attccggccg acctcaagag cgacgtgcgc
     2821 gtgctcgaca tcgagccgcg gcgcgtgacc ctgcggttcg agacgcgtgc gtcgcggcgc
     2881 gtcgcggtgg tgaacgccgg ccgcgtcagc atcgcgggcg gcgcggcccg cgtcgagttc
     2941 gacccggaga cggtgcgcat caccgggccg cggcgcgtgg tgcgcgcgct gcgcgggatc
     3001 tcgcccgccg cgctcaccat cgccgccgac gacacgctgc cgcacatcgc cgagctggat
     3061 accgccggcc tcggggggct gcgggtgtct cccgcgcagg tgaaggtgcg cgccactgca
     3121 ccggcggcac cggccacgcc atgacgcgca tcctcggcat cgagacctcg tgcgacgaga
     3181 cgtcggccgc cgtgctcgcc ggcgacgggg acgtcgcgac cctcgagtcg ctcgtcatcc
     3241 tctcgcagga cgtgcatcgc atcttcggcg gcgtcgtccc cgagatcgcc tcgcgccacc
     3301 acctcaccgc catcgtcccg gtggtgcgac aggcgctcgc cgatgcgaag gtggagctgg
     3361 acggcgtgga cgccgtggcc gtgacgaacg ccccggggct ggtgggcgcg ctgctcgtgg
     3421 gcgtgagctt cgccaaggcc atcgcccacg gacgcggcat cccctgcgtg ggcgtgcacc
     3481 acatggaggg gcacctcttc gccaccgcgc tcgagcaccg cgacgccgtg ccgccattca
     3541 ccgcgctcct cgtctcgggc gggcacaccc tgctggtgga cgtcgaggcg tggggccggt
     3601 accggctgct cggtcgcacg cgcgacgacg cggccggcga agcgttcgac aaggtcgcca
     3661 agctcctggg gctgccctac ccgggtggtc cgcacgtgga gcggctggcg cgcgagggcg
     3721 agcccggaag gttccgcttc gcgcggccga tgctgcggcg caaccagcag cccggcgacg
     3781 acgactacta cgacgtgtcg ttcagcgggc tgaagaccgc ggtgctgcac gcggtgcgcg
     3841 gcggcacacc cgaagacgcg ccgcacatcg cccgcggctt ccacgacgcg ctggtggaca
     3901 ccctcgtcga gaagacggcg cgcgcggtgg agcggttcgg ccgcacgcgg gtggtgctcg
     3961 gcgggggcgt cgccggcaac cgcaccctcg ccgacgccat gcgcgcccgg atgcgccgcg
     4021 cgggcgccga ggtgtacgcg cccagccccc ggctggcgac cgacaacgcg gcgatgatcg
     4081 cgcgcgccgg actgttccat ctcgagcgcg gcgagcgtgc gccgctcgac ctcaacgcct
     4141 tcgcgtcact ccccctcccc ggcctcgtga ccgcatgacg ctgctccccg atccgatcgt
     4201 ccaccatccg ttcgcgtacg agctcggccc gatccagatc accggcttcg ggatcgccat
     4261 cctgatgtgc ttcgtcgtcg cccaggtggt ggcccagcag gagctggcgc gacggggcca
     4321 cgatcccgag ccgatctccg acatggtctt cgccgccctc atcggcgggc tgctcggggc
     4381 gaagctgtac tacgtcgtcg tgctcgggca ctgggactcc ttcttcgacc gcggcggctt
     4441 cgtctactgg ggtgggctga tcggcgggat gctggccgtg atggccgtgg tggtgaagaa
     4501 gcgtgtgggc ctgatgaaga tgttcgacgt ctccgcgccc gcgctggcgg cggcgtacgc
     4561 cgtcggccgc accggctgct gggcggtggg cgacgactat ggccgcccgt ggaaggggtt
     4621 cctcgccgtg gccttcccgg agggagcgcc gccgagcacc gccggcatca tggcgcgcga
     4681 tttcgggatc gccatgcccg cgggcgcgaa cccgatgacc gtgctgtcgg tgtacccgac
     4741 gcagctctac gaggtggcga tggggctcgt gatgttcgcc atcctctggc ggctgcgcga
     4801 ccacgagcac gccgaagggt ggctgttcgg cgtgtacgcc gtgctgtcgg ggctggagcg
     4861 gttcgtgatc gagttcttcc gggcgaagga cgaccggttc gtcgcgggac tcacctacgc
     4921 acagctcatc tcggtggggt tcatcgtgct cggggtggtg ttcatggcct ggcggtggcg
     4981 ggtggggggc aacaagcgcg gaatccacgc ggtagggatg tgaccctcgc cggcgaggcg
     5041 ttggcggaac gcatcgcccg gcgcaccagg acagccagcc caggaggtcc cgcatgccca
     5101 agctgatcgt cttcaaccac gtcaccctcg acggatactt caccggcgtc aatggggaca
     5161 tgagcttcgc gcacgagggc agtgacgacg ccgagtggag cgccttcgtc gagcagaacg
     5221 cgggcggggg aggcgcgctg ctgttc
//
LOCUS       DASSYW010000011         3865 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1344679, whole genome shotgun sequence.
ACCESSION   DASSYW010000011 DASSYW010000000
VERSION     DASSYW010000011.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3865)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3865)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3865
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1344679"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            11..109
                     /locus_tag="VFN38_00210"
     CDS             11..109
                     /locus_tag="VFN38_00210"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: protein motif:HMM:NF013766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase"
                     /protein_id="HET9010196.1"
                     /translation="MEPASTWYSAEKYHQDYLQKNPGGYTCHYMRG"
     gene            200..901
                     /locus_tag="VFN38_00215"
     CDS             200..901
                     /locus_tag="VFN38_00215"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HET9010197.1"
                     /translation="MTLLRMKYRAPLLMGALVLGACTVSDTKSADTMASASATPATVQ
                     PATPTPTTTPVQPASSASDSAAPSSGAGQSTSPLRVEVDLKARKLYLYEGGKRVETHS
                     VAIGSDKWPTATGEWTIKQVIFNPEWIPPDETWAEERLPKKSGAPDNPLGRAQLVYDP
                     PRTIHGTNQPSSIGTNVSHGSIRMNNAEIVALAKRIMAASGAAKDDAWYAKAASQRTE
                     KQVVDLPRAVPIRVY"
     gene            1031..1741
                     /locus_tag="VFN38_00220"
     CDS             1031..1741
                     /locus_tag="VFN38_00220"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HET9010198.1"
                     /translation="MRILVVEDDERMGRFVRRLLVEDGYAVDVAATGERGLLDASVND
                     YDLVLLDLGLPDRSGLAILRALRREGNAVPVVVLSGRRDEPEIVRALDAGADDYLVKP
                     VSGPMLLARVRAGLRRGGATRDETLACGGFVVHRLTRTIWCKGAALDLTPREYALLEH
                     LVLHCGEVVTRSSLRERIWESEADLDSNIIDAAIARLRRRLERSDAAGSIITVRGVGY
                     RLADGVAPRRHARETGPT"
     gene            1937..>3865
                     /locus_tag="VFN38_00225"
     CDS             1937..>3865
                     /locus_tag="VFN38_00225"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HET9010199.1"
                     /translation="MSDGCTDAQAESFARARRATSATSDEFPVHLGRASTRHLQHLIR
                     LARATLGVDGVHLRLVRATGAGDEPHRWTVSTAASTLPLVADAPAPLHGTLDAVALEW
                     NQTLMIDDVLASVWRIARPPERTALAFLGQPFDVGSGVRGVMWAWSRWRREWTAEEGR
                     SLGRFVAAAAEELAAGAPPESGELALRWRDTVLAALTSRSPLALAAIDHRTDEVLLYS
                     QRFLELFGLEHLEPRLAACAVDARELDAACRERLLSRSGEPARPAFPLAVGGHSDELL
                     ELADGRTLRRVAFPVPAADDDTVAPMCEGYLFEDATERVRAQRTLENRTALLEAVLES
                     SPLALVATAVDGTTLMWNHAAERAFGWRAEEVVGGPSPAIPEEERPLHAAERAAALAN
                     VPWEGREVELVRRDGTRIYMAAFSSVMPVSDWSMATPSGAAEPAVLTAYADLTERQEL
                     EQRLRDAQKREVVGRLAAGTAHDFNNLLTAIIGYADLALESLDRRTSAARDVMEIRQT
                     AERATCLTRQLLAFTRRTPTGGGICQPSEVVRSLENLLRRLAGPDVELDWLLGASGTV
                     RVDPVHLEQVVLNLVVNARDAMPDGGMVVIETDDVVIGEDGRTDPADSPWHAPAGLSA
                     GPYVAVAVRDQGDGIPPDV"
BASE COUNT          575 a         1313 c         1427 g          550 t
ORIGIN      
        1 cacgaccagc atcgagccgg cctccacctg gtacagcgcg gagaagtacc accaggatta
       61 cctgcagaag aatccgggcg ggtacacctg ccactacatg cgcgggtagg cagcggaccg
      121 aagcgcgagt cgccgcgcgg cggtgtccca tgcacggctc ttgcccttgc cgtctccacc
      181 ttttccacga gacggtgaga tgacgcttct tcgaatgaag taccgggcgc cgctgttgat
      241 gggcgcgctc gtgctcggcg cgtgcacggt gagcgatacg aagtcggccg acacgatggc
      301 gagcgcgtcg gcaactccgg cgaccgtgca gccggcgacg ccgaccccga cgacgacacc
      361 ggtgcagccg gcctcttcgg cgagcgacag tgccgcgcca tcctcgggag cggggcagtc
      421 gacgtcgcca ctgcgggtcg aggtcgacct gaaggcgcgc aagctctacc tgtacgaggg
      481 tggcaagcgc gtggaaacgc actccgtcgc gatcggatcg gacaagtggc cgacagcgac
      541 cggggagtgg acgatcaagc aggtgatctt caaccccgag tggatccccc ccgacgagac
      601 gtgggccgag gagcggctgc ccaagaagtc gggtgcgccg gacaatccgc tggggcgtgc
      661 gcagctcgtc tacgacccgc cgcgcacgat tcacggcacc aaccagccca gctcgatcgg
      721 cacgaacgtg tcccatgggt ccattcgcat gaacaacgcg gagatcgtgg cgctggccaa
      781 gcggatcatg gcggcgagcg gcgccgcgaa ggacgacgcc tggtacgcga aggccgcctc
      841 gcagcggacg gagaagcagg ttgtggatct gccgcgcgcc gtcccgatca gggtctactg
      901 agaccggcgg gcggaaacga ttttccgatc gggggcgttg gtcgacaggg cttgcctccc
      961 gggcgccgcg agccaatatc gccacatggc atgacggccc tcgattcgac caacgtcaca
     1021 ggagagtcat gtgcggatcc tcgtcgtgga ggacgacgag cggatgggac gattcgtcag
     1081 gcggctgctg gtggaggacg ggtacgcggt cgacgtagcc gcgacgggtg aacggggact
     1141 gctcgacgcg agcgtcaacg actacgacct ggtgctcctg gaccttggcc tccccgaccg
     1201 atccggcctc gcgatccttc gcgcgctgcg gcgtgagggc aacgccgtgc ccgtcgtcgt
     1261 gctgtcgggc cgccgcgacg agccggaaat cgtgcgcgcg ctcgacgcgg gcgccgacga
     1321 ctatctcgtc aagccggtgt ccggcccgat gctcctcgcg cgcgtgcgcg ccggcctgcg
     1381 tcgcggcggc gccacccgcg acgagaccct cgcctgcggc gggttcgtgg tacaccggct
     1441 cacccgcacg atctggtgca agggggccgc gctcgacctg acgccgcggg agtacgcgct
     1501 gctcgagcat ctggtgctgc attgcggcga ggtcgtgacg cgatcgtcgc tgcgcgagcg
     1561 catctgggaa tccgaggccg acctcgattc caacatcatc gacgccgcga tcgcgcggct
     1621 gcgtcgccgc ctcgagcgca gcgatgcagc aggctccatc atcacggtgc gcggcgtcgg
     1681 gtaccggctc gccgatggcg tcgcgccgag gcggcacgcc cgggagaccg ggccaacctg
     1741 acggggccgt caggtcctcg tcatgcagcg gtcaggatga tgggtcaatg gtgctcgtga
     1801 ccagcatcac cgccgcacca tcgccaccct gccgccgatg tccgctgctc gagaggatcc
     1861 gccgcccgct cccgcgcgcg ccacatcgac gagcctcggt acgggacccg aggcgggccg
     1921 cgcctttcgc tcatgggtga gcgacggatg caccgacgcg caggcggaga gcttcgcacg
     1981 cgcgcgacgc gcgacgtcgg cgacgagcga tgaattcccg gtgcacctcg gccgcgcctc
     2041 cacgcgccac ctccagcacc tcattcggct ggcgcgcgcg acgctcggcg tcgatggggt
     2101 gcatctccga ctggttcgcg ccacgggagc gggagacgag ccgcaccgct ggacggtgag
     2161 cacggccgcg tcgacgctgc cgctcgtggc ggatgcaccg gcgccgctgc acggcacgct
     2221 cgacgccgtt gcgctggagt ggaaccagac gctgatgatc gacgacgtcc tcgcgtcggt
     2281 ctggcggatc gctcgaccgc ccgagcgcac ggccctcgcg ttcctcggcc agccgttcga
     2341 tgtcggcagc ggcgtgcgcg gggtgatgtg ggcatggagc cgctggcgac gggaatggac
     2401 ggcggaggag gggcggtcgc tcggacggtt cgtcgccgcc gcggcggagg agctcgcggc
     2461 cggcgcgccg ccggagagcg gtgagctcgc gttgcggtgg cgtgacacgg tgctggcggc
     2521 gctgacgagc cgatcaccac tcgcgctcgc ggcgatcgat caccggacgg acgaggtcct
     2581 gttgtactcg cagcggtttc tcgaactgtt cggcctcgag cacctggagc cgaggctcgc
     2641 cgcgtgcgcg gtcgatgcgc gagagcttga tgcggcgtgc cgcgagcgcc tgctctcgcg
     2701 gagcggcgag ccggcgcggc cggccttccc gctcgccgtc ggtggacatt ccgacgagct
     2761 cctcgagctg gccgatgggc gcacgctgcg ccgcgtcgcg tttccggtcc ccgccgccga
     2821 cgacgacacg gtggcgccca tgtgcgaggg gtacctgttc gaggatgcga cggagcgcgt
     2881 gcgggcgcag cgcacgctcg agaaccggac cgcgttgctg gaggcggtgc tggaatcgtc
     2941 gccgctggcg ctcgtggcca cggccgtgga cggcaccacc ctgatgtgga atcacgcggc
     3001 ggagcgcgcg ttcggctggc gtgccgagga agtcgtggga gggccgagcc ccgccatccc
     3061 ggaggaggag cggccattgc atgccgccga gcgtgctgcc gccctggcga acgtcccatg
     3121 ggaaggccgc gaggtggagc tcgtgcgccg cgacggcacc cggatctaca tggccgcctt
     3181 ttccagcgtc atgccggtga gcgactggtc gatggcgacg ccgagcggcg cggcggagcc
     3241 cgccgtgctg acggcatacg ccgacctcac cgaacggcag gagctggagc agcggttgcg
     3301 cgacgcgcag aagcgcgaag tcgtcggtcg cctcgccgcg gggacggcgc acgatttcaa
     3361 caacctgctc acggccatca tcggctacgc cgacctcgcg ctcgagtcgc tcgaccggcg
     3421 cacgtccgcc gcacgcgacg tcatggagat ccggcagacg gccgagcgcg cgacgtgcct
     3481 cacgcgccag ctgctggcct tcacccgtcg cacgccgacg ggcgggggga tctgccagcc
     3541 gtcggaggtc gtgcgctcgc tcgagaacct cctgcgccgg ctggccggcc cggatgtcga
     3601 gctggattgg ctgctcgggg catccggcac ggtgcgcgtc gatccggtgc acctggaaca
     3661 ggtcgtcctg aacctcgtgg tgaatgcacg cgatgcgatg ccggacggcg ggatggtggt
     3721 gatcgagacc gacgacgtgg tgatcggcga ggatggtcgg acggatccgg cggattcgcc
     3781 atggcacgcg ccggcgggac tgtccgccgg cccgtatgtg gcggtggcgg tgcgggatca
     3841 gggcgacggg attccccccg acgtg
//
LOCUS       DASSYW010000012         2729 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1234194, whole genome shotgun sequence.
ACCESSION   DASSYW010000012 DASSYW010000000
VERSION     DASSYW010000012.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2729)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2729)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2729
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1234194"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1437
                     /locus_tag="VFN38_00230"
     CDS             <1..1437
                     /locus_tag="VFN38_00230"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HET9010200.1"
                     /translation="TLVKCIMGYYRADTGRVSVGGVEARIGSPRDAAAHGIGMVYQHF
                     TLVDAMTVAENLELARRHLPFVFDWAAERAAVAKFMATMPFRLDPSRPVHTLAAGEKQ
                     KLEILKQLYLGSTIVILDEPTSVLTPSEADEVLGLLRGMVKEGRLTVLMISHKFREVM
                     QFADEVTVLRRGRPAGRGRVADLTPDAMARMMVGDEPPRATGTRAARAPGDVVLRIDS
                     LTAHDDLGMPAVSELRLEVRAGEIVGIAGVSGNGQKELMAALSGERTVDDADVVKLMG
                     AAVGRLDAEQRRALGLAFVPEERLGRGAVPEMSLAENALLTAHRQGLLRGAFVRADAV
                     RDYAQATIDEFNVKAGGPEAAARSLSGGNLQKFIVGREIRQAPKVMIAAQPTWGVDVG
                     AAAQIRQALIDLRDAGVAVLVVSEELDELFEICDRLAVIAQGRLADARPVRETNAEEI
                     GMLMSGAFIAAGAHSERTFSPAGAIGPG"
     gene            1458..2537
                     /locus_tag="VFN38_00235"
     CDS             1458..2537
                     /locus_tag="VFN38_00235"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HET9010201.1"
                     /translation="MIRLEARPEPSRLFRWASPLIAALATVAIGFALFPLMGKHPIDA
                     FHAFFVKPVDSLYGVGELLLKASPLMLIATGLAAGYRANIWNIGAEGQLTLGAIAGGG
                     LALALHGVESAFVLPLMMVAGVAGGMAWAAIPAWLRTRFNANEILTSLMLVYVAALVL
                     SLLVHDAWRDPEGFNFPQSKMFSDSALLPNLLEDTRLNVGFLIALAVVAAGWVFMQKS
                     YAGYQMRVAGLAPAAAHYAGISAPRTVWMGMLIGGACAGLAGVGEVAGPIGQLLPSVS
                     PGYGFAAIIVAFVGRLNPIGIVFASLLMSLLYLGGESAQLNLALPSAVTGLFQGTLLF
                     FLLAADVFIHYRLRGTQRVAKGVAA"
BASE COUNT          352 a          965 c          997 g          415 t
ORIGIN      
        1 acgctcgtca agtgcatcat gggctactac cgcgccgaca cgggccgcgt gagcgtcggc
       61 ggcgtcgagg cgcgcatcgg cagcccgcgt gacgccgccg cccacggcat cggcatggtc
      121 taccagcact tcacgctcgt cgacgcgatg acggtggccg agaacctgga gctggcgcgg
      181 cgacacctgc cgttcgtctt cgactgggcg gcggagcgcg cggcggtcgc caagttcatg
      241 gcgacgatgc ccttccgcct cgatccgtca cggccggtgc acacgctggc cgcgggcgag
      301 aagcagaagc tggagatcct gaagcagctc tatctcggca gcacgatcgt catcctcgac
      361 gagccgacgt cggtgctgac accgtcggag gccgacgagg tgctcgggct cctgcgcggc
      421 atggtcaagg agggccgcct cacggtgctg atgatctcgc acaagttccg cgaggtcatg
      481 cagttcgccg acgaggtgac ggtgctgcgc cggggccgcc cggcgggccg cggacgggtg
      541 gccgatctga cccccgacgc gatggcgcgc atgatggtcg gcgacgagcc gccgcgcgcg
      601 accggcaccc gcgccgcgcg cgcgcccggc gacgtcgtgt tgcgcatcga ttcgctgacg
      661 gcgcacgacg acctgggcat gcccgcggtg tccgagctgc gcctggaggt gcgggccggc
      721 gagatcgtcg gcatcgccgg cgtgtcgggc aacggccaga aggagctgat ggccgcgctc
      781 tcgggcgagc gcaccgtcga cgatgccgac gtcgtgaagc tgatgggcgc ggcggtcggc
      841 cggctcgacg ccgagcagcg ccgcgcgctg gggctcgcgt tcgtgcccga ggagcggctc
      901 gggcgcggcg cggtgcccga gatgtcgctc gccgagaacg cgctgctgac cgcgcaccga
      961 cagggcctgc tgcgaggcgc gttcgtgcgt gccgacgcgg tgcgcgacta cgcgcaggcg
     1021 acgatcgacg agttcaacgt gaaggcgggc ggccccgagg ccgccgcgcg atcgctctcg
     1081 ggtggcaacc tgcagaagtt catcgtcgga cgcgagatcc gccaggcgcc gaaggtgatg
     1141 atcgccgcgc agccgacctg gggcgtggac gtcggcgcgg ccgcgcagat ccgccaggcg
     1201 ctgatcgacc tgcgcgacgc cggcgtcgcg gtgctcgtcg tctccgagga gctggacgag
     1261 ctgttcgaga tctgcgaccg gctcgcggtc atcgcgcagg gccgtctcgc cgacgcgcgc
     1321 ccggtgcgcg agaccaacgc ggaggagatc ggcatgctga tgtccggcgc cttcatcgcc
     1381 gcgggcgcgc actcggagcg cacgttctcg cccgcggggg cgatcggccc gggttgagcg
     1441 accgcgcccc gaccccggtg atccgcctcg aagcccgtcc cgagccctcg cgcctgttcc
     1501 gctgggcgtc gccgctgatc gccgcgctgg cgacggtcgc gatcggcttc gcgctgttcc
     1561 cgctgatggg caagcatccg atcgacgcgt tccacgcgtt cttcgtgaag ccggtcgact
     1621 cgctctacgg cgtgggcgag ctgctgctga aggcctcgcc gctgatgctg atcgccaccg
     1681 gcctcgccgc ggggtaccgc gcgaacatct ggaacatcgg cgcggaggga cagctcacgc
     1741 tgggcgcgat cgcgggcggc ggcctcgccc tcgcgctgca cggcgtcgag tccgcgttcg
     1801 tgctgccgct gatgatggtg gcgggcgtgg caggcggcat ggcgtgggcc gcgatccccg
     1861 cgtggctgcg cacccgcttc aacgccaacg agatcctcac ctcgctgatg ctggtctacg
     1921 tcgccgccct cgtgctgtcg ctgctcgtgc acgatgcctg gcgcgatccg gaaggcttca
     1981 atttcccgca gtccaagatg ttcagcgaca gcgcgctcct gccgaacctc ctcgaggaca
     2041 cgcggctcaa cgtcggcttc ctgatcgcgc tcgcggtcgt cgcggcgggc tgggtgttca
     2101 tgcagaagag ctacgccggc tatcagatgc gcgtcgcggg cctcgcgccg gcggcggcgc
     2161 actacgcggg catctcggcg ccgcgcaccg tgtggatggg catgctgatc ggcggcgcct
     2221 gcgcaggcct cgccggcgtc ggcgaggtgg cggggccgat cggccagctc ctgccttcgg
     2281 tgtcgcccgg ctacggcttc gccgcgatca tcgtcgcgtt cgtcggccgc ctcaacccga
     2341 tcggcatcgt gttcgcgagc ctgctcatgt cgctgctcta cctcggcggc gaatctgccc
     2401 agctcaacct cgcgctcccc tcggcggtga ccgggctgtt ccagggcacg ctgctgttct
     2461 tcctgctcgc ggcggacgtg ttcatccatt accggctgcg gggaacccaa cgcgtggcca
     2521 agggagttgc cgcatgagcg gagggcgaaa gaccgggggc cagggcccga gttcgcctgc
     2581 agcgtccccc ccttgcgacc gtcccgaggg cgataccggg acctgacccg atggacaccc
     2641 tcgcgcagct ggtgatcctc acgctcgccg cgggcacgcc gctcgtgtac gcggcgctcg
     2701 gcgagctcgt caccgagaag gcgggcgtg
//
LOCUS       DASSYW010000013         4166 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1289194, whole genome shotgun sequence.
ACCESSION   DASSYW010000013 DASSYW010000000
VERSION     DASSYW010000013.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4166)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4166)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4166
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1289194"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1842
                     /locus_tag="VFN38_00240"
     CDS             <1..1842
                     /locus_tag="VFN38_00240"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HET9010202.1"
                     /translation="GMGVVYRARDERLQRRVAIKVLPPELAFQTDIRERFTREAQTAA
                     KLSHPHIVPIHTVGEGHGLVYFVMGYVDGESVAGRIRRRGKLPIEEVRRIMGESADAL
                     GAAHALSIIHRDIKPDNILLEGSRGRVMVTDFGIAKALSGSSGATLTGAGVAIGTPAF
                     MSPEQAAGEREIDGRSDLYSLGIVTYQMLTAELPFNAPTVAGILMKQITEPAPDVRAK
                     RSDVPEDLALAVSRCLEKDPENRWPTADALRRALENRVVAGYQPTGLGWRAGRSGTRP
                     GTRDGAPAAPPRGATAGPPRRSRSPGLLDREANDARLGRLDRDQRALARGGARLEGRR
                     QRTGREAAIPDTGEPKIVQQVRGQFASWAAVSLGLFGINVATGLDTPWFLFPTFGMGI
                     GMMKNYAKLWQSGYSWRDVFTRPPAADAVETLMTKGARPPRRLPQPTAEEFGAYLPQI
                     LQVQSDRFAIGKLMEKLPASERNMLPEVQQTVDSLYERATDVARTLHAMDSNLDTEGL
                     GSIDDRIAALSKEPDDPERTRRLNLLQRQRQTIIDLQGRRTQVANHLESCVLAMQNVR
                     FDLLRLRSAGVAAVLGDLTQATQQAKALSRDVDNAIAAAGEIREAMK"
     gene            1887..>4166
                     /locus_tag="VFN38_00245"
     CDS             1887..>4166
                     /locus_tag="VFN38_00245"
                     /inference="COORDINATES: protein motif:HMM:NF024180.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAT domain-containing protein"
                     /protein_id="HET9010203.1"
                     /translation="MPKVVPFTAFRVTLLTLLLVSSTAAQQTNTDPRDVVQSAERSVQ
                     DDSVATVRARWTEALRRDSTDRAAALGLASLARLTYDFATAERLLNGILARADGSVDP
                     WTVQAKIGLYRVANSSGNTTRADSMLNVAVREARRIGDRGGELDALIGLSGTRASSGP
                     DEPAFATLDSLRRVLPPGDSWERGEYLCRLGLYRGVGGDTGVTTLIREGIAVAERLEE
                     RQLAGHCLEALALAHSLHGKPDSVFPIMARAETMLRATNAHASLARLYSRRSDELQAR
                     GRLGEAKIALGQVLAEATLARNGNRLANAYGGLGMLALRTGDLPSAASWYERAAVLHD
                     SLGNGEGGMISRQNRAEVLAASGDLAPAKTALTATLAEAEKFGFFEDAVIARQRLARL
                     AMRRGEWAEAEAQLAAAEAKARGHGLPGVAENLIYDRGVLALGTGRLNEAERLFGGFV
                     AKIAPEDRLVRHAARVRLAEVVARKGELARAEREITAASRELEEWRASLGDDELRGYA
                     FSATVLGEYDAQAPTARVLAALAAGHRAEAAFALAEQRRARLLTDRLNQALALREGSA
                     PDSAAVASTRAHPLTSEEIARALPDSATAVVEYVAGSEGAPTTLFVLSQSGVRAAVLS
                     SADTLAPTIRRLVAMMENGGRPDALTRSLGATLLEPARRLLPRGVTRLVIVPDGPLHH
                     LPFDALTLADGEVAVERWAIGLAPSASLAATLWQRDARAEQGPVPGRVLAMGDPQFPL
                     ELSASAMRDGETYRSAFAAA"
BASE COUNT          603 a         1511 c         1498 g          554 t
ORIGIN      
        1 gggatggggg tggtctaccg cgcccgcgac gagcgcctcc agcggcgggt ggcgatcaag
       61 gttctccccc cggagctggc cttccagacc gacatccggg agcggttcac ccgcgaggcc
      121 cagaccgccg ccaagctgag ccatccccac atcgttccga tccacacggt cggcgagggg
      181 cacggcctgg tctacttcgt catgggctac gttgatggcg agtcggtggc gggccggatc
      241 cgccgccgcg gcaagcttcc gatcgaagag gtccgcagga tcatgggcga gtcggccgat
      301 gcgctcggcg ccgcgcacgc gctctcgatc atccaccgcg acatcaagcc cgacaatatc
      361 ctcctggagg ggtcccgggg ccgggtgatg gtgaccgact tcgggatcgc caaggccctc
      421 tccggcagct cgggggccac gctgaccggt gccggcgtcg cgatcggaac gccggccttc
      481 atgagccccg agcaggccgc cggcgagcgc gagatcgacg ggcgctcgga cctctacagc
      541 ctgggcatcg tcacctacca gatgctcacc gccgagctgc ccttcaacgc gcctaccgtc
      601 gccggcatcc tcatgaagca gatcacggag cccgccccgg acgtccgtgc caaacggtcc
      661 gatgtgccgg aggacctcgc gctcgccgtg agtcgctgcc tggagaagga cccggagaac
      721 cgctggccca cggccgacgc gttgcgccgc gcgttggaga accgggtcgt ggccggctat
      781 cagcccaccg ggctcggctg gcgggccggc cgtagcggca cccggcccgg gactcgggat
      841 ggagcgccgg ccgctccacc gcgcggtgcg acggccggcc cgccgcgtcg cagccgttca
      901 cccgggctcc tggaccgcga ggcaaacgat gcccgcctcg gccggctgga ccgcgaccag
      961 cgcgcgctgg cccgcggggg agcgcggctg gagggacgcc gtcagcgaac gggacgcgag
     1021 gccgccattc ccgacaccgg cgagccgaag atcgtccagc aggtccgcgg ccagttcgcc
     1081 agctgggcgg cggtctcgct gggtctcttc ggcatcaacg tggctaccgg actggacacg
     1141 ccgtggttcc tcttcccgac cttcggcatg gggatcggga tgatgaagaa ctacgccaag
     1201 ctctggcagt cgggctacag ctggcgcgac gtgttcaccc gcccgcccgc ggccgacgcc
     1261 gtcgagacgc tgatgacgaa gggcgcccgc cccccccgcc ggctccccca gcccaccgcg
     1321 gaagagttcg gcgcctatct gccccagatc ctccaggtgc agagtgaccg gttcgccatc
     1381 ggcaagctga tggagaagtt gcccgcgtcg gagcggaaca tgctgccgga ggtccagcag
     1441 accgtggatt cgctctacga gcgcgcgacc gacgtggcgc ggacgctgca cgcgatggac
     1501 tcgaacctcg acaccgaggg actgggctcc atcgacgacc ggatcgcggc gctctccaag
     1561 gagccggacg atcccgagcg cacgcgtcgg ctcaacctcc tccagcgcca gcggcagacg
     1621 atcatcgatc tgcagggccg ccggacgcag gtggcgaacc atctggagtc ctgcgtgctg
     1681 gcgatgcaga acgtgcgctt cgacctactg cggctccgat ccgccggcgt cgccgcggtg
     1741 ctcggcgatc tgactcaggc cacacagcag gccaaggcgc tctcccgcga cgtggacaac
     1801 gccatcgccg cggcgggcga gatccgggag gcgatgaagt agtgcgagct cgtcagcatg
     1861 tcaccctgag cgcagcgaag gggaccatgc cgaaggtggt cccctttact gcgttcaggg
     1921 taaccctgct cacgctgctc ctcgtgtcgt cgaccgctgc ccagcaaacc aacaccgacc
     1981 cccgcgacgt cgtgcagagc gccgagcggt cggtccagga cgacagcgtc gccaccgtgc
     2041 gcgcccgctg gaccgaggcg ctccgccggg acagcaccga ccgcgccgcc gcgctcggtc
     2101 tcgcctcgct cgcccggctc acctacgact tcgccaccgc cgagcggctg ctgaacggta
     2161 tcctggcccg tgcggatgga tcggtggatc cctggacggt ccaggccaaa atcggcctct
     2221 accgcgtcgc caactcgagc ggcaacacta cccgcgccga ttcaatgctc aacgtggccg
     2281 tccgcgaggc acgccggatc ggcgaccgcg ggggtgagct cgatgcgctg atcggcctga
     2341 gcggcacccg ggcctcgagc ggtccggacg agcccgcctt cgcgacgctc gacagtctcc
     2401 gacgcgttct gccacccggc gacagctggg agcgcggcga gtatctctgc cggctcgggc
     2461 tctaccgtgg cgtgggtggc gacaccgggg tgactacgct gatccgcgag ggcatcgccg
     2521 tagccgaacg gctggaggag cggcagctcg ccgggcactg cctcgaggcg ctcgcgctgg
     2581 cccacagcct ccacggcaag ccggactcgg tgttccccat catggcccgg gccgagacga
     2641 tgctccgcgc cactaacgcg cacgcatcgc tcgcgcgtct ctactcccgc cgcagcgacg
     2701 agctccaggc tcgcggccgg ctgggggagg cgaagatcgc gttgggtcag gtgctcgcgg
     2761 aggcgacgct cgcccggaac ggcaatcgcc tggccaacgc ctatggcggt ctcggcatgc
     2821 tggcgctccg gaccggcgat ctcccctccg ccgcctcctg gtacgagcgc gccgcggtac
     2881 tgcacgacag tctcggcaac ggcgagggcg ggatgatctc gcggcagaat cgggctgagg
     2941 tgctggccgc ctcgggcgac ctggcgccgg cgaagacggc gctcaccgcc acgttggcgg
     3001 aggcggagaa gtttggcttc ttcgaggacg cggtgatcgc gcgccagcgc ctggcccgcc
     3061 tggcgatgcg ccgcggcgag tgggcggagg ccgaagcgca gctcgccgcc gcggaggcga
     3121 aggcccgcgg ccacgggttg cccggcgtcg ccgagaacct gatatacgac cgtggcgtgc
     3181 tcgccctggg caccggccgc ctgaacgagg ccgagcgact cttcggcggg ttcgtggcga
     3241 agatcgcgcc ggaggaccgc ctggtccgcc acgcggcgcg ggtccggctc gccgaagtgg
     3301 tggcacgcaa gggcgagctg gcgcgcgccg agcgggagat caccgccgcg agccgcgagc
     3361 tggaggagtg gcgcgcgtcg ctgggcgacg acgagctccg gggctacgcc ttctccgcca
     3421 cggtgctggg cgagtacgac gcccaggcac cgaccgcgcg ggtgctcgcc gcgctcgcgg
     3481 ccggtcaccg tgcggaagcg gcgttcgcgc tggcggagca gcgtcgggcg cggctgctca
     3541 ccgaccggct gaaccaggca ctcgcgctgc gtgaaggcag cgcgcccgac agcgccgccg
     3601 tggcgagcac ccgcgcgcac ccgctcacgt ccgaggagat cgcgcgagcg ctaccggaca
     3661 gcgcgaccgc ggtggtggag tacgtcgcgg gcagcgaggg cgcgccgacc acgctcttcg
     3721 tcctcagtca gtcaggtgtg cgcgccgccg tgctgtcgag cgcggatacg ctggcgccga
     3781 cgatccggcg cctggtcgcg atgatggaga acgggggacg gcccgacgcg ctcacgcgga
     3841 gcctgggagc taccctgctc gagcccgccc gcaggctgct tccccgcggt gtcacccggc
     3901 tggtgatcgt tccggacggc ccgctgcatc atctcccgtt cgatgcgctg acgctcgccg
     3961 acggcgaggt cgcggtagag cggtgggcga tcggtctcgc gccctcggcc agcctcgccg
     4021 caacgctgtg gcagcgcgac gcgcgggcgg agcaggggcc ggtgccggga cgggtgctgg
     4081 cgatggggga cccgcagttc ccgctggagc tctccgcgtc ggcgatgcgc gacggcgaga
     4141 cctaccgttc ggcattcgcc gcggcc
//
LOCUS       DASSYW010000014         2377 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1399876, whole genome shotgun sequence.
ACCESSION   DASSYW010000014 DASSYW010000000
VERSION     DASSYW010000014.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2377)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2377)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2377
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1399876"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1176
                     /gene="murC"
                     /locus_tag="VFN38_00250"
     CDS             <1..1176
                     /gene="murC"
                     /locus_tag="VFN38_00250"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: protein motif:HMM:TIGR01082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008763 - UDP-N-acetylmuramate-L-alanine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HET9010204.1"
                     /translation="ALVVTSAMPKDHPELVRARELGLPVIRRAEALGEATAGTMLVGV
                     AGTHGKSTTTVLTTEALAAAGLEPTGYVGARVTAWGGNVRAGSGERFVVEADEYDRSF
                     LALAPTVAVVTNLEADHMDIYADLDDLHGTFAQFVRGARYVVLCADDAGANRVPTPPT
                     AEVIRYGLTSPDARLRAVDLRRAALGTTFTVVYDGKPLGDVSLAVPGEHNVRNALAAL
                     AVGLGLGATVPQMAPGIAGFRGVERRFQLLGEVAGALVVDDYAHHPTEVRATVQAARA
                     AAPERRLVIAFQPHLFSRTRDLAREFAEALAEADVVYLLDVYPSREQPIPGVTSDLIA
                     AVMRSLGRTPVWQGPRAALAGVLAGGVQPGDLGITMGAGDVTQCGPELLASLGVAAA"
     gene            1173..1904
                     /locus_tag="VFN38_00255"
     CDS             1173..1904
                     /locus_tag="VFN38_00255"
                     /inference="COORDINATES: protein motif:HMM:NF020067.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsQ-type POTRA domain-containing protein"
                     /protein_id="HET9010205.1"
                     /translation="MSDPGGAPSTGPAAVRFPRWRLAAGALVAVALLAAPFWGPRGLS
                     TLAFFRVRKVEVLGLRYTPPGELLARLRVDTTRSVWDPLAPLAARVATHPQVERVVVT
                     RRLPGTLVVDVTERRPVALVALGTTLRAVDERGVTLPLDPSRTPVDAPIVTAAPRETA
                     VYHLLGAMQREAPRLYARVSSIRSAGGGELLLQLADLPVRTMTTVTLARLGDIEPVER
                     DLARRRLRAAELDLRYKDQVIARLP"
     gene            1901..>2377
                     /locus_tag="VFN38_00260"
     CDS             1901..>2377
                     /locus_tag="VFN38_00260"
                     /inference="COORDINATES: protein motif:HMM:NF014541.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HET9010206.1"
                     /translation="MNTDRLVAGLDIGSAKTTAIIAEVVGEMKHPTIKVLGVGQARTT
                     GMRRGVVSDIEETTRSIRKALQDAERMAGAQITDVYAGIAGEHVRAMTSKGIVAVTND
                     EIAKSDVDRANEVARAQAIPQDRELLHAIPQEYAVDKDTGIRDPIGMSGTRLEVEMY"
BASE COUNT          303 a          915 c          847 g          312 t
ORIGIN      
        1 gccctcgtcg tcacctcggc catgccgaag gaccaccccg agctggtgcg cgcgcgcgag
       61 ctcgggctgc cggtcattcg ccgggccgag gcgctgggcg aggccaccgc cggcacgatg
      121 ctggtgggcg tcgccggcac ccatggcaag tccacgacga cggtgctgac caccgaggcg
      181 ctcgccgcgg cgggactcga gcccaccggc tacgtggggg cgcgcgtcac cgcctggggc
      241 ggcaacgtgc gcgccggcag cggcgagcgc ttcgtcgtgg aggccgacga gtacgaccgc
      301 tccttcctcg cgctcgcccc caccgtggcg gtggtgacga atctcgaggc cgaccacatg
      361 gacatctacg cggacctcga cgacctgcac ggcaccttcg cgcagttcgt gcgcggcgcg
      421 cgctacgtcg tcctctgcgc cgacgacgcg ggggcgaacc gcgtgcccac gccgcccacg
      481 gcggaagtga tccgctacgg cctcacgtcg cccgacgccc gcctgcgcgc cgtggatctc
      541 cgccgcgcgg cgctcggcac cacgttcacc gtggtctacg acggcaagcc gctcggcgac
      601 gtgagcctcg cggtgccggg cgagcacaac gtgcgcaacg cgctcgccgc gctcgccgtg
      661 gggctcggcc tcggtgccac cgtgccgcag atggcgccgg gcatcgccgg gttccggggc
      721 gtcgagcgcc ggttccagct cctcggcgag gtcgcgggcg ctctcgtggt ggacgactac
      781 gcgcaccacc ccaccgaggt gcgcgccacc gtgcaggcgg cgcgcgctgc cgcgccggag
      841 cgccgcctcg tcatcgcctt ccagccgcac ctcttctcgc gcacgcgcga cctcgcgcgc
      901 gagttcgccg aggcgctcgc cgaggccgac gtcgtctacc tcctcgacgt ctatccctcg
      961 cgcgagcagc ccatcccagg cgtgacgagc gacctgatcg ccgccgtgat gcggtcgctc
     1021 ggacgcaccc cggtgtggca ggggccgcgc gccgcgctcg cgggcgtgct cgccggcggc
     1081 gtccagccgg gcgacctcgg gatcacgatg ggcgctggcg acgtgacgca atgcgggccc
     1141 gagctgctcg cgtcgctcgg cgtggccgcg gcgtgagcga tcccggcggc gccccgtcca
     1201 ccggaccggc cgccgtccgg tttccccgct ggcggctggc cgcgggagcg ctggtcgcgg
     1261 tggcgctgct cgccgcgccg ttctggggcc cgcgcggcct gtcgacgctc gccttcttcc
     1321 gcgtgcgcaa ggtcgaggtg ctcggcctgc ggtacacgcc gcccggcgag ctgctcgccc
     1381 gcctgcgcgt cgacaccacg cgcagcgtct gggatccgct cgcgcccctc gccgcgcggg
     1441 tcgccacgca tccccaggtg gagcgcgtcg tggtgacgcg ccggctcccc ggcaccctcg
     1501 tggtggacgt gacggagcgg cggccggtcg ccctcgtggc gctggggacg acgctccgcg
     1561 ccgtggacga gcgcggggtg accctgccgc tcgatcccag ccggaccccg gtggacgcgc
     1621 cgatcgtcac cgccgcgccg cgcgagaccg cggtgtatca tttactgggc gcgatgcagc
     1681 gtgaggcccc ccggctctac gcgcgcgtca gctccatccg ctcggcggga ggcggcgagc
     1741 tgctgcttca gctcgccgat ctccccgttc gcacgatgac gactgtgacg ctcgcgcgtc
     1801 ttggtgacat cgagcccgtc gagcgcgacc tcgccagacg ccggctccgc gccgccgagc
     1861 tcgatcttcg ctacaaggac caagtgatcg ccagactgcc atgaacaccg accgcctcgt
     1921 cgccggcctc gacatcggct cggccaagac gaccgccatc atcgccgaag tcgtcggcga
     1981 gatgaagcac ccgacgatca aggtgctcgg cgtcggccag gcccgcacca ccggcatgcg
     2041 ccgcggcgtc gtctccgaca tcgaggagac gacgcgctcc atccgcaagg cgctgcagga
     2101 cgccgagcgc atggcgggcg cgcagatcac cgacgtgtac gcggggatcg ccggcgagca
     2161 tgtgcgcgcg atgacctcca agggaatcgt cgccgtcacc aacgacgaga tcgcgaagtc
     2221 ggacgtcgac cgggcgaacg aggtggcgcg cgcccaggcg atccctcagg accgcgagct
     2281 gctgcacgcg atcccgcagg agtacgccgt cgacaaggac accggcatcc gggatcccat
     2341 cgggatgagc gggacccggc tcgaggtgga gatgtac
//
LOCUS       DASSYW010000015         3887 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_681413, whole genome shotgun sequence.
ACCESSION   DASSYW010000015 DASSYW010000000
VERSION     DASSYW010000015.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3887)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3887)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3887
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_681413"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1322
                     /locus_tag="VFN38_00265"
     CDS             <1..1322
                     /locus_tag="VFN38_00265"
                     /inference="COORDINATES: protein motif:HMM:NF019120.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="alpha-glucuronidase"
                     /protein_id="HET9010207.1"
                     /translation="RHKTDEVYAVIPDFGGFVVQGDAQGQPGPEAYGRSHADGANLLA
                     DAVVPHGGIVIWRAYASGDRTPPDRAREIVDEFVPLDGSFRRNVMVQVKNGPLDFQPR
                     EPFNPILGAMPRTPLLLEFQLTKEHLGNDTHLVYLGPLMEEVLRADTWRGGKGATVAR
                     VVDGSLHRYVRTGIAGVANIGTDRNWTGSIFNQANWYAFGRLAWDPSLSARSVAEEWV
                     RLTFSNDSAVVATVRGMMMTSREAAVSYMTPLGLSSMSAPPSHYGPAPWIKDGRPDWT
                     PVYYHRADSTGIGFDRTAEGSDALEQYAEPVRARYASRATVPDSLLLWFHHVGWRERI
                     GTGRTLWDELVHRYNAGVDSVRAMQQQWGTVAGRIDDERFRQVQASLVIQEREARWWR
                     DASLQYFRTLSRRPIPPRYEQPAHPLDFYMRLRCPADARRPRCEALR"
     gene            1457..1885
                     /locus_tag="VFN38_00270"
     CDS             1457..1885
                     /locus_tag="VFN38_00270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010208.1"
                     /translation="MRLFPRALVAASLVLAAAGCAPPQPSTAAPRADRNVLTAEQLRS
                     QSWSNAYEAVEALRMNWLKPRGSDSFNSPSVVVVYLDNVKLGGVENLRSLQLANILSI
                     RHYDANQANARWGVGHAAGAIQVVTLSTTGSPAIPPAADH"
     gene            1988..3643
                     /gene="pgm"
                     /locus_tag="VFN38_00275"
     CDS             1988..3643
                     /gene="pgm"
                     /locus_tag="VFN38_00275"
                     /EC_number="5.4.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004614 - phosphoglucomutase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucomutase
                     (alpha-D-glucose-1,6-bisphosphate-dependent)"
                     /protein_id="HET9010209.1"
                     /translation="MSVDPRAGQPATQSMLANVPRLVAEYYTRRPDPAAREERVAFGT
                     SGHRGSSLRGAFNEDHILAIAQAIHEYRRGQGIDGPLFLGIDTHALSEPALASALEVL
                     AANEVEVMVDSRDGFTPTPAVSHAILRHNRGRTNGLADGIVVTPSHNPPEDGGFKYNP
                     PSGGPADAAVTTWIQNRANTLLESRLDGVKRVSVARARAAGTTHRYDYLDEYVNDLPS
                     VVDFEAIRGGGISMAVDPLGGAGVAYWGEIASRHRVPLTVLSDAVDPTFRFMTADWDG
                     RIRMDCSSPYAMRGLIALRDRYDVAWACDTDHDRHGIVARSAGLLNPNHYLAVAIAYL
                     ASHRPQWRSDVGIGKTVVSSSLIDRVVARLGRRLVEVPVGFKWFVDGLTDGSLGFVGE
                     ESAGATFLRRDGTVWTTDKDGIIMGLLAAEMTAVTGRDPGEQYAALTAEFGDPAYARI
                     DAPATQAQKAVLSRLSESDVVAAELAGEPIVRVMTRTPHRDAPIGGLKVATEHGWFAA
                     RPSGTEEVYKLYAESFLGTDHLRRLQSEAQALVSRAFAAGGAT"
BASE COUNT          566 a         1433 c         1348 g          540 t
ORIGIN      
        1 ggcgccacaa gaccgacgag gtctacgcgg tgatccccga cttcggcggc ttcgtggtgc
       61 agggcgacgc ccaggggcag ccgggtcccg aagcctatgg tcgctcccac gccgacggcg
      121 cgaatctcct ggccgacgcc gtggtgccgc acggcggcat cgtgatctgg cgcgcgtacg
      181 cgtccggcga ccgcactccg cccgaccgtg cgcgggagat cgtcgacgag ttcgtcccgc
      241 tggacggcag cttccgccgc aacgtgatgg tgcaggtgaa gaacggaccg ctcgacttcc
      301 agccgcgcga gccgttcaac ccgattctcg gcgcgatgcc gcgcacgccg ctgctgctcg
      361 agttccagct cacgaaggag cacctcggca acgataccca tctcgtgtat ctcggtccgc
      421 tcatggagga ggtgctgcgc gccgacacct ggcgcggcgg caagggggcc acggtggcgc
      481 gcgtcgtgga tgggtcgctg caccgctacg tgcgcaccgg catcgccggc gtcgccaaca
      541 tcggcaccga ccgcaactgg accggctcca tcttcaacca ggccaactgg tacgccttcg
      601 gccggctcgc atgggatccg tcgctgtccg cgcgcagcgt ggccgaggag tgggtgcgcc
      661 tcaccttctc caacgattcc gccgtcgtgg cgacggttcg cggcatgatg atgacgtcgc
      721 gcgaggcggc cgtgagctac atgacgcccc tcggtctcag cagcatgagc gcgcccccca
      781 gccactatgg ccccgcgcca tggatcaagg atggccggcc ggactggacg ccggtctact
      841 atcaccgtgc cgacagcacg ggtatcggct tcgaccggac ggcggagggg agcgatgcgc
      901 tggagcagta cgccgaaccg gtgcgcgccc ggtacgccag ccgcgcgacc gtgcccgact
      961 cgctgctgct ctggttccat cacgtgggct ggcgggagcg catcggcacc ggccgcacgc
     1021 tctgggatga gctggtgcac cgctacaacg ccggcgtgga cagcgtgcgg gccatgcagc
     1081 agcagtgggg cacggtggcc ggccgcatcg acgacgagcg ctttcgccag gtgcaggcgt
     1141 cgctcgtgat ccaggagcgc gaagcgcgct ggtggcgcga cgcctcgctg cagtacttcc
     1201 gcaccctctc gcggcggccg attccgccgc gctacgagca gccggcccac ccgctcgact
     1261 tctacatgcg gctgcgctgt ccggccgacg cgaggcggcc ccgctgcgag gcgctgcgct
     1321 gacggccgaa attccccggc cgtccattcc gcactcttga ccacgctcgc cccgcgcgta
     1381 tgatcggaat cgaggccggc gcgcgagcgc gcactcggtc gtcgatacgc ctgtcgcccc
     1441 tctcacctct ctcgccatgc gactctttcc gagagcgctc gtcgccgctt cgctggtgct
     1501 ggccgcggcc ggctgcgcgc cgccacagcc gtccaccgcc gccccgcgcg ccgatcgcaa
     1561 cgtgctcacc gcggagcagc tgcgctccca gtcctggtcc aacgcctacg aggcggtgga
     1621 ggcgctgcgg atgaactggc tgaagccgcg cggctccgac agcttcaact cgccgagcgt
     1681 ggtggtggtc tatctggaca acgtcaagct cggcggcgtc gagaacctgc ggtcgctcca
     1741 gctggcgaac atcctctcca tccggcacta cgacgccaac caggcgaacg cacgctgggg
     1801 cgtggggcac gccgcgggcg ccatccaggt cgtcacgctc agcacgaccg gatcgcccgc
     1861 cattccgccg gccgccgacc actagcgcgc gcacccgccc gcgcgcggca ccaccattgc
     1921 gccgggaggg tggagcacgc cgcgctcggg cgcggcgtgc tccacccttc gtcgcaccag
     1981 gaagctcatg tccgtcgatc cccgggccgg ccagcccgcc acgcagtcca tgctcgcgaa
     2041 cgtgccgcgc ctcgtggcgg agtactacac gcgccgtccc gatccggcgg cacgcgagga
     2101 gcgagtcgct ttcggcacct cgggccaccg cggatcgtcg ctgcgcggcg ccttcaacga
     2161 ggaccacatc ctcgccatcg cccaggcgat ccacgaatac cggcgcgggc agggcatcga
     2221 cggaccgctc ttcctcggga tcgacaccca cgccctgagc gagccggcgc tggccagcgc
     2281 gctcgaggtg ctggcggcca acgaggtcga ggtgatggtc gactcgcgcg acggcttcac
     2341 ccccaccccc gccgtctcgc acgccatcct gcggcacaat cgcgggcgca cgaacgggct
     2401 ggccgacggg atcgtggtca cgccgtcgca caatccgccc gaggacggcg gcttcaagta
     2461 caacccgccc agcggcggcc ccgccgacgc ggccgtcacg acgtggatcc agaaccgcgc
     2521 gaacacgctc ctcgagtcgc gcctcgacgg ggtgaagcgc gtctccgtgg cgcgcgcgcg
     2581 cgccgccggc accacgcacc ggtacgacta cctggacgag tacgtgaacg atctcccgag
     2641 cgtggtggac ttcgaggcga tccgcggcgg cggcatatcg atggcggtgg atccgctggg
     2701 gggcgccggc gtggcgtact ggggcgagat cgcgtcgcgc caccgtgtcc cgctcacggt
     2761 gctgagcgac gccgtcgacc ccaccttccg cttcatgacg gccgactggg acggccggat
     2821 ccggatggac tgctcgtcgc cgtacgcgat gcgggggctg atcgccctga gggaccggta
     2881 cgacgtcgcc tgggcgtgcg acaccgatca cgaccggcac gggatcgtgg cacgcagcgc
     2941 ggggctgctg aacccgaacc actaccttgc cgtcgccatc gcctatctcg cgtcgcaccg
     3001 cccgcagtgg cggagcgacg tcggcatcgg caagacggtg gtgagcagca gcctgatcga
     3061 ccgggtcgtg gcgcggctgg gccgccgcct cgtggaggtg ccggtggggt tcaagtggtt
     3121 cgtcgacggc ctcaccgacg gctcgctcgg cttcgtgggc gaggagagcg cgggggcgac
     3181 cttcctccgc cgcgacggaa cggtgtggac gacggacaag gacggcatca tcatggggct
     3241 gctcgccgcc gagatgaccg ccgtcacggg ccgcgacccg ggtgagcaat acgcggcgct
     3301 caccgcggaa ttcggcgacc ccgcatacgc gcgcatcgac gccccggcga cccaggcgca
     3361 gaaggcggtg ctttccaggc tgtcggagtc cgacgtggtg gcggcggagc tggccggcga
     3421 gccgatcgtg cgcgtcatga cgaggacgcc ccaccgggac gcgccgatcg gcggcctgaa
     3481 ggtcgcgacg gagcacggct ggttcgctgc ccgcccctcg ggcacggaag aggtctacaa
     3541 gctctacgcc gaaagcttcc tcggcaccga tcaccttcgg cgcctccagt ccgaggcgca
     3601 ggcgctcgtc tcccgcgcct ttgccgcggg cggagcgacg tgaccgaggg gcaccactgg
     3661 tgaaacgtgc accggaggga gaacgtaggg gtcgggaggc gccgcggccc tccctcccgg
     3721 tccagctgga ctgatcgttc ctcgccacct gccgaatgac tccgatgatg caagcgcccg
     3781 agattacgcc gcccacgccg ccggcgctgc cgtcaggcgc gcgcttcacc gtggtcggcg
     3841 gcggcgagag cccgaccgcg gtctaccgcg cgcaggtggc ccagcgc
//
LOCUS       DASSYW010000016         2637 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_681407, whole genome shotgun sequence.
ACCESSION   DASSYW010000016 DASSYW010000000
VERSION     DASSYW010000016.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2637)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2637)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2637
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_681407"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1338)
                     /locus_tag="VFN38_00280"
     CDS             complement(<1..1338)
                     /locus_tag="VFN38_00280"
                     /inference="COORDINATES: protein motif:HMM:NF015948.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF362 domain-containing protein"
                     /protein_id="HET9010210.1"
                     /translation="MSGAGDARVALVRPGRGAAEQDAYDESRVRDAVRRAGALLGWSD
                     PERGAFGSAIGAGERVVVKPNWVLHANQGPGGFEPLVTHGSLVRSVVLEALRSAAGSV
                     VLGDAPVQGCDFEALVERSGLAKWAQALRAADSRFDGPRDFRRTRSVVRDGVRQADED
                     LISRDQFVLFDLGAESLLEPVTRPDGRFRVTQYDPRQMALTHRPGRHQYLVARAVIEA
                     DVVINLPKLKTHKKAGVTCALKNLIGINGNKEFLPHHRVGGSERGGDCYPGSSSAKRA
                     LEMVHDAVNRSRGTAGRRALDVGARVLQRVLRLQGDRLGVEGSWAGNDTIWRTCLDLN
                     RILIYGRADGSLADVPQRRVLNVVDAIVAGQGDGPLAPQPLPLGMVIAGSSSAAVDWA
                     GAQLLGYDPSRIPIAHHAFDDFRWPLTRFGADDVQIVGDGGSSGGRMDAALRPD"
     gene            complement(1335..>2637)
                     /locus_tag="VFN38_00285"
     CDS             complement(1335..>2637)
                     /locus_tag="VFN38_00285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010211.1"
                     /translation="DEGMRFRAAAESWSDDARRQWMLQRLRTVVRGAARDVPYYRELF
                     RGIGFDPATDFGFDDYALLPVLERADVRRAGRALRSEAVDPSSLRHDATGGSSGSPTE
                     LWKGPEERGWGESALDYTIRKVGVAPGARTALLWGHHLDPTGRGSLRERLQDALQNMR
                     WFESLRLSPEVLRGYHRDLEAWRPTLMLAYSSALAALAEELDRAGVRPSYPACCFVTG
                     AEKVYAHQREVITRVFGKPLHERYGGRDIGVIGIQVDPARSLAFWVDWSNVLVEPEVA
                     PREGEPASVLITKLHADGMPMLRYRVGDEGRFPAGSRPGHPALSLDEVVGREADRISL
                     PSGGWVHGLEFPHMLKDFPVRDYRVHQRADASVTVSVVALDAFSAAHRERLLELLRAN
                     MPGLPVAVELVDAIPKTRANKWRPVVSEIGGAATPSGGARS"
BASE COUNT          364 a         1003 c          918 g          352 t
ORIGIN      
        1 gtccggccgc agcgccgcgt ccatgcgtcc gccgctcgac ccgccgtcgc cgacgatctg
       61 cacgtcgtcc gcgccgaagc gggtgagcgg ccaccggaag tcgtcgaagg cgtggtgggc
      121 gatgggaatg cgcgacgggt cgtagccgag gagctgcgcg ccggcccagt cgacggcggc
      181 gctgctcgag ccggcgatca ccatgccgag cggcagcggc tgcggcgcca gcggtccgtc
      241 cccctggccg gcgacgatcg cgtccacgac gttgagcacg cgtcgctgcg gcacgtcggc
      301 gagcgagccg tcggcgcggc cgtagatgag gatgcggttg aggtcgagac aggtgcgcca
      361 gatcgtatcg ttccccgccc acgacccctc gacgccgagc cggtctccct ggaggcgcag
      421 cacacgctga aggacgcgcg cgccgacgtc cagcgcccgg cgccccgccg tgccgcgcga
      481 tcggttgacg gcgtcgtgca ccatctcgag ggcgcgcttc gccgagctgc tccctggata
      541 gcaatccccg ccgcgctccg agccgccgac gcggtggtgg ggaaggaact ccttgttccc
      601 gttgatgccg atgaggttct tcagcgcgca cgtcacgccc gccttcttgt gcgtcttgag
      661 cttcggcagg ttgatcacga cgtccgcttc gatcaccgcg cgcgcgacga ggtactgatg
      721 tcgtccgggg cgatgcgtga gcgccatctg ccgcggatcg tactgcgtca cgcgaaaccg
      781 cccgtcgggt cgcgtgaccg gctccagcag gctctcggcg ccgaggtcga agagcacgaa
      841 ctggtcgcgg gagatgagat cctcgtccgc ctggcgcacg ccgtcgcgta cgacgctgcg
      901 cgtgcgccgg aaatcgcgcg gtccatcgaa tcgcgagtcg gcggcgcgca gcgcttgcgc
      961 ccacttcgcg agtccgctcc gctcgacgag ggcctcgaag tcgcacccct gcaccggcgc
     1021 atcgcccagc accacggagc cggcggcgct gcgcagcgcc tcgagcacca ccgagcgcac
     1081 gagcgagccg tgcgtcacca gcggctcgaa cccccccggt ccctggttcg cgtgcagcac
     1141 ccagttgggc ttcacgacga cacgctcgcc ggcgccgatc gcgcttccga aggcgccgcg
     1201 ctccgggtcg ctccagccga gcaaggcacc ggcgcgccgc accgcgtcgc gcacgcgact
     1261 ctcgtcgtac gcgtcctgct ccgccgcgcc ccgcccggga cggacgagcg cgacccgcgc
     1321 gtctccagcg ccgctcatga tctcgctccg ccggacggcg tcgccgcgcc gccgatctcg
     1381 ctcaccaccg gccgccactt gttcgcgcgc gtcttcggga tcgcgtccac cagctcgacc
     1441 gccacgggaa gacccggcat gttggcgcgc agcagctcga ggagccgctc gcggtgggcc
     1501 gccgagaacg cgtcgagcgc gacgacgctc accgtgacgc tggcgtcggc gcgctggtga
     1561 acgcgatagt cgcgcaccgg aaagtccttc agcatgtgcg ggaactcgag cccgtgcacc
     1621 cacccccccg agggaaggct gatgcggtcg gcctcccgtc cgacgacctc gtcgagcgag
     1681 agcgcgggat gccccggacg gctgccggcg gggaagcggc cctcgtcgcc cacccgatag
     1741 cggagcatcg gcatcccgtc ggcgtgcagc ttcgtgatca ggaccgacgc gggctcaccc
     1801 tcccgcggcg cgacttccgg ctccacgagg acgttgctcc agtccaccca gaaggcgagc
     1861 gaccgcgcgg gatccacctg gatgccgatc acgccgatgt cgcgtccgcc gtagcgctcg
     1921 tgcagcggct tcccgaagac cctcgtgatc acctcgcgct ggtgggcgta caccttctcg
     1981 gcgccggtca cgaagcagca cgcggggtag ctcgggcgca cgccggcgcg gtcgagctcc
     2041 tcggcgagag cggcgagggc gctcgagtag gcgagcatca gcgtcggccg ccaggcctcg
     2101 aggtcccgat gatacccacg cagcacctcg ggcgagagac gcaggctctc gaaccagcgc
     2161 atgttctgca gcgcgtcctg cagtcgctcg cgcagcgagc cgcgccccgt gggatcgaga
     2221 tggtgccccc agaggagggc cgtccgagct cccggcgcca cgccgacctt gcggatggtg
     2281 tagtcgagcg cgctctcccc ccagccgcgc tcctccggac ccttccacag ctcggtcggc
     2341 gagccgctcg agcccccggt cgcgtcgtgg cgcagcgacg aggggtccac cgcctcgctg
     2401 cgcagcgcgc ggccggcgcg cctgacgtcg gcgcgctcga gcaccgggag cagcgcgtag
     2461 tcgtcgaagc cgaagtcggt ggcggggtcg aacccgatcc cgcggaagag ctcccgatag
     2521 tagggcacgt cgcgcgcggc gccgcgcacc accgtgcgca ggcgctgcag catccactgc
     2581 cgccgcgcgt cgtcgctcca cgactcggcg gcggcgcgaa accgcattcc ctcgtcg
//
LOCUS       DASSYW010000017         2831 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_220540, whole genome shotgun sequence.
ACCESSION   DASSYW010000017 DASSYW010000000
VERSION     DASSYW010000017.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2831)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2831)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2831
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_220540"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(129..407)
                     /locus_tag="VFN38_00290"
     CDS             complement(129..407)
                     /locus_tag="VFN38_00290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010212.1"
                     /translation="MTVYTYVYYIAEKVPGAMEMQRFAHPIHVGIVSASDHEAAYTAV
                     LHDLRPTFADAPQELEVRFEVVTAPRSGTGVWRHGKPIDTDITFTSAD"
     gene            complement(487..951)
                     /locus_tag="VFN38_00295"
     CDS             complement(487..951)
                     /locus_tag="VFN38_00295"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF012478.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HET9010213.1"
                     /translation="MHLRSLTALLALTVAVGCNDNSPTAVPIEQTTFDASLGVDLARS
                     TKLPSGLYYRDITVGTGTTLATGQTVGVQYSGALANGQVFGSQAAPTPPLTFVIGSGQ
                     VIAGWDQGLPGMKVGGRRQLVIPPELAYGASGRGPIPPNAVLVFTVDAITAR"
     gene            complement(996..2753)
                     /locus_tag="VFN38_00300"
     CDS             complement(996..2753)
                     /locus_tag="VFN38_00300"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HET9010214.1"
                     /translation="MTPRTASPDGSPIAAGFSGLGLDPRVVEALAALGYEEPTPVQRE
                     AIPPLLAGRDVLGQAATGTGKTAAFALPLMSLLTPTADARERTRAFILVPTRELAMQV
                     AEAVHKYGKAMGVIALPIYGGASMETQIRSLKRGVDVVVATPGRALDHIRRKTLRLDG
                     VRTVILDEADEMLDMGFAEDLEAILDAMPTERQTALFSATLPPRIADIANKHLKDPVR
                     VRIDREIVPAGSAPRVRQVAYIVSRAHKMATLGRVLDVENPTSAIVFCRTRTEVDEVT
                     ETLNGRGYRAEALHGGLSQEQRDRVMKKFRANTTDLLVATDVAARGLDVQHVSHVVNY
                     DVPSAAEGYVHRIGRTGRAGREGVAITLAEPREHRLLRNIEYQTKQKIEIAAVPTVAD
                     LRARRLEMTRASLRETILAGGLDQFRVLVDSLAQEFDIMDVAAAAVKQADAKESGGDP
                     EEIPTVTLHPPRPNRSDRERAPTAKAGSRRHEAAKAGARTASGKPPRITPEWDVARLY
                     IGAGRLAKIRPSDLVGAIVNEAGVDPRAIGAIQITERFSLVEVPDEIADGIIDTLRGA
                     TIKGKRVPVRRDREQGGAG"
BASE COUNT          379 a          923 c         1092 g          437 t
ORIGIN      
        1 gctgcgcgat gaggcgcgag aagaactgcg gatcctcgcg caccatggcg gcggcccagg
       61 cgcgattgtt ggcgaacagc tcgggaatct gggtcatgcg aggcggacgg cgatgcaggc
      121 gcgggccgtc aatcggccga cgtgaacgtg atgtcggtgt cgatcggctt gccgtgacgc
      181 cacacgccgg tgccgctgcg cggcgcggtc acgacctcga agcgcacctc gagctcctgc
      241 ggcgcgtcgg cgaaggtggg tcggaggtcg tgcagcacgg cggtgtaggc ggcttcgtga
      301 tcgctcgccg agacgatgcc gacgtgaatg gggtgcgcga agcgctgcat ctccatcgcg
      361 ccggggacct tctcggcgat gtaatagacg taggtgtaca cggtcactcg gttggaaggt
      421 cgaggtcgtt tccggatgat atagcccgtc ggccgcgttc cggccagccg acgggctccg
      481 cgcaccctac cgggcggtga tcgcgtcgac cgtgaagacg aggacggcgt tggggggaat
      541 ggggccccgc ccgctggctc cgtatgcgag ctccggcggg atgacgagct ggcggcggcc
      601 accgaccttc atgccgggga ggccctgatc ccagccggcg atcacctggc cggagccgat
      661 gacgaacgtc aggggcggcg tcggcgcggc ctgcgagccg aagacctggc cgttggcgag
      721 cgcgccggaa tactgcacgc cgaccgtctg ccccgtggcc agcgtggtgc ccgtgccgac
      781 ggtgatgtcg cggtagtaga ggccggacgg cagcttcgtg gaacgggcga gatcgacgcc
      841 gagcgacgcg tcgaaggtgg tctgttcgat cggcacggcg gtcggggagt tgtcgttgca
      901 gcccacggcc acggtgaggg cgagcaacgc agtgagggag cgcagatgca tcggagcgtc
      961 gggagtggag gtgatggcag ggcggcgcgc gggaactagc ccgcgccgcc ctgctcgcgg
     1021 tcgcggcgca cgggaacgcg cttgcccttg atcgtggcgc cccgcagggt gtcgatgatg
     1081 ccatcggcga tctcgtcggg cacctcgacg agcgagaagc gctcggtgat ctggatggcg
     1141 ccgatggcgc gcgggtccac gccggcctcg ttgacgatcg cgcccacgag gtcggacggg
     1201 cggatcttgg cgagtcggcc ggcgccgatg tacagccggg cgacgtccca ctccggcgtg
     1261 atgcgcggcg gcttgccgct cgccgtgcgg gcgccggcct tggccgcctc gtgtcgccgc
     1321 gagcccgcct tggccgtcgg cgcgcgctcg cgatccgagc ggttgggacg gggcggatgc
     1381 agcgtgacgg tgggaatctc ctccggatcg ccgccgctct ccttcgcgtc ggcctgcttc
     1441 accgccgcgg cggcgacgtc catgatgtcg aactcctgcg ccagcgaatc gacgagcacg
     1501 cggaactggt cgagcccgcc ggcgaggatc gtctcgcgca acgacgcgcg cgtcatctcg
     1561 aggcggcgtg cgcgcaggtc ggccaccgtc ggcacggcgg cgatctcgat cttctgcttg
     1621 gtctggtact cgatgttgcg cagcagccgg tgctcgcgcg gttcggcgag ggtgatcgcc
     1681 acgccttcgc ggccggcgcg gcccgtgcgg ccgatgcggt gcacgtaccc ctcggcggca
     1741 ctcggcacgt cgtagttcac gacgtgcgac acgtgctgga cgtccagccc gcgcgccgcc
     1801 acgtcggtgg cgacgagcag atcggtcgtg ttggcgcgga acttcttcat cacgcggtcg
     1861 cgctgttcct gcgacagccc gccgtgcagc gcctcggcgc gatagccgcg gccgttgagc
     1921 gtctccgtga cctcgtccac ttcggtgcgg gtgcggcaga acacgatggc cgacgtggga
     1981 ttctccacgt cgagcacgcg gccgagggtg gccatcttgt gcgcgcgcga gacgatgtac
     2041 gccacctggc gcacgcgcgg cgcggagccc gccggcacga tctcgcggtc gatgcgcacg
     2101 cgcaccggat ccttgaggtg cttgttggcg atgtcggcga tgcgcggcgg cagcgtggcg
     2161 ctgaagagcg cggtctgccg ctcggtgggc atcgcatcga ggatcgcctc gagatcctcg
     2221 gcgaagccca tgtcgagcat ctcgtcggct tcgtcgagga tgacggtcct gacgccgtcc
     2281 aggcgaaggg tcttgcggcg gatgtggtcc agcgcgcggc cgggcgtggc gacgacgacg
     2341 tcgacgccgc gcttgagcga gcggatctgc gtctccatgc tcgcgccgcc gtagatgggg
     2401 agcgcgatga cgcccatcgc cttgccgtac ttgtgcaccg cctccgccac ctgcatcgcc
     2461 agctcgcgcg tgggcacgag gatgaaggcg cgggtccgct cgcgcgcgtc ggcggtgggc
     2521 gtgagaaggc tcatgagcgg cagcgcgaac gcggccgtct tgccggtgcc cgtggcggcc
     2581 tgtcccagca cgtcgcggcc ggcgagcagc ggcgggatcg cctcgcgctg cacgggcgtg
     2641 ggctcctcgt aaccgagggc ggccagggcc tcgacgactc ggggatcgag gccgagtccg
     2701 gagaagccgg cggcgatggg ggagccgtct gggctcgcgg tacgcggtgt catccgtgga
     2761 agatacaccc ttgtcgttcc gagcgaggcg aaggacccga aggcgcactc gtgcgcgtgc
     2821 gggtccttcg c
//
LOCUS       DASSYW010000018         4275 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_54642, whole genome shotgun sequence.
ACCESSION   DASSYW010000018 DASSYW010000000
VERSION     DASSYW010000018.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4275)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4275)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4275
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_54642"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     regulatory      397..487
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01051"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cyclic di-GMP riboswitch class I; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /bound_moiety="cyclic di-GMP"
                     /db_xref="RFAM:RF01051"
     gene            510..1919
                     /locus_tag="VFN38_00305"
     CDS             510..1919
                     /locus_tag="VFN38_00305"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HET9010215.1"
                     /translation="MLRPRRITLPLALLAILVGTSCADPVTPRGVFEIELTPDTLVLT
                     EGRLGAIEAEPRDAAGALVTGVTASLSTSNEQVATITSDGVVQARSVGIATIIAEVGS
                     TRGTSTVVVTRATAAPVASVSVSPPSPTIAVGGSTQLTAIARDANNNVIAGRATSWVS
                     SDTTIARVSATGAVMGVRAGGATVTATVEGAHGSAVVTVSAPQPPPTGDPVLVGAGDI
                     ASCNSVEDDSTAKLLDRIAGTVYTLGDNVYDSGLAAEFANCYDPTWGRHKARTKPSIG
                     NHETYGTTDAAGYYDYFGAAAGERGKGYYSYDVGAWHVVVINNMIDVAATSTQVAWLK
                     ADLAAHPTKCTLAYWHYPLFSSGDHGNQTKMRPVWQALYDAGADLVLNGHDHDYERFS
                     PQDPNGVADAARGIREFVVGTGGASHYRFNVIQPNSEVRDQTASGLLKLTLHATSYDW
                     EFVPITGQTFTDKGTGTCH"
     gene            2018..3706
                     /locus_tag="VFN38_00310"
     CDS             2018..3706
                     /locus_tag="VFN38_00310"
                     /inference="COORDINATES: protein motif:HMM:NF024627.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="right-handed parallel beta-helix
                     repeat-containing protein"
                     /protein_id="HET9010216.1"
                     /translation="MRVSLFLRRAGRVGGALLGAALVGACADPVATGPLAPASVSVAP
                     VTTSVAIGATALLAATVLDADGQRVTDVPVSWRSSDPALAKVSESGVVTGVAVGTATI
                     TARADTRQGTAQITVYSAGSSAGTVDFAAIKRGIRPRGFGATPYTHRAPASGARVWYV
                     APGGSDAAAGTDAAPLKTINRAAQLAQAGDVVTIRAGTYDEAVSVAHSGTVDKPVVIQ
                     AAERGTVVLTGGRNMFKPASDAVGYVAVRGLIFRRYSDPLTSDQGIAALRAAQGWVVE
                     DALFDEAGRIAISILGSGAEITRTTIQRSYVDAIHAWTPTDAATGPTDPAYAPLTGIR
                     ITDVVLLENNVTPNPLVGSVAEYVAKLWGTRGALIDNIESYGNNGPGFWFDTDNSDYT
                     IRNSYFHDNKPVAGSNNEYGKGLFLEVSWGPGLVERNVFVNNGGAGLALDNVQGVQVR
                     DNLFVGNAHCVTFVNGDRGNNPDGQPRWPLKNIAVHDNQCRDWTARGAMATIYGTFGS
                     PAAMGIVADANTYDPLRATALADWFSIGTFSALAEVQSKLGWEQNGRVAAIPVP"
     gene            3791..>4275
                     /locus_tag="VFN38_00315"
     CDS             3791..>4275
                     /locus_tag="VFN38_00315"
                     /inference="COORDINATES: protein motif:HMM:NF019236.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1565 domain-containing protein"
                     /protein_id="HET9010217.1"
                     /translation="MRTRAIDPAVGLGGSLFILGALGMHLGAAQQAWREAPPADFAAV
                     IRGVRPRGFAAVPYMLLEPAPGGREWYVSPSGNDSAPGSRAAPLRAIDRAAQLARAGD
                     VVTIAPGTYAESVRVRNSGTPERRIVFQAERRGSVVLTGGRYTFQPAFWTGAPEPRGQ
                     W"
BASE COUNT          700 a         1517 c         1450 g          608 t
ORIGIN      
        1 ctcggggccc ggacgtacac gtgggagttc ctgcgcgccg ccggcgccgc cttcaccgac
       61 acgggctccg ggacctgcca ctagcgcggg cgatcctgga acgtgtggcc cgcctgttcc
      121 gctggcgacc ccccggacta tcgatgggga tgattgtcac ggccgcgaca ccatagtcac
      181 ccggccgtgg gaaagatcgt ccattctggg tgcgtagtat cacagcgtga tacacctgtt
      241 caggagactt tcgaatcgtc gccgacccct ttgcgggacc ggcagggagc cggctcccgc
      301 ggcaacgaag aaggccgcaa cgccagtaga gaggaccatc accccgcgca gctcccacaa
      361 ctgactcacg gcaggatcgc cgccctctag gagggtcagc gacaaaggca aacccggcga
      421 aagccggcga cgcaaagccc cgaggctaac gcgcagacca ccgcgccacg ccagtcgagc
      481 cgccgaccga ccatccactg gagggtacca tgctcaggcc acgtcggatc acgctgccgc
      541 tcgccctgct cgcgattctc gtcggaacca gctgcgccga ccctgtgacg ccccgcggcg
      601 tcttcgagat cgaactcacc cccgacaccc tcgtcctcac ggaggggcga ctcggcgcta
      661 tcgaggcgga gccgcgcgat gctgcggggg cgctcgtcac aggggtgacg gcaagtctct
      721 ccacctccaa tgagcaggta gcgaccatca cctcggacgg ggtggtgcag gccagatcgg
      781 tcggcattgc gacgatcatt gccgaggtgg gctctacccg cggcacgtcg acggtcgtcg
      841 tcacccgtgc gaccgccgcg ccggtagcct cggtgagcgt ctccccgccg tcgccgacca
      901 tcgcggtggg tggcagcacg cagctcaccg ccatcgcccg cgacgcgaac aacaacgtca
      961 tcgccggccg cgcgacgagc tgggtgagct cggacacgac catcgccagg gtttcggcaa
     1021 cgggcgcagt catgggcgtg cgggcgggag gagccacggt cacggcgacg gtggagggcg
     1081 cgcacggaag cgctgtcgtg acggtgtcgg ccccccagcc cccgccgacc ggcgacccgg
     1141 tcctcgtcgg tgcgggggat atcgcgtcct gcaactccgt ggaggacgac tcgacggcca
     1201 agctgctcga ccggattgcg ggcacagtgt acaccctcgg cgacaacgtc tacgacagcg
     1261 gcctcgccgc agagttcgcg aactgctacg accctacatg ggggcgccac aaggctcgca
     1321 cgaagccctc gatcggcaac cacgagacgt acggcaccac tgacgccgcc ggctactacg
     1381 attacttcgg cgccgccgcc ggcgagcgcg ggaagggcta ctacagctac gacgtgggcg
     1441 cctggcatgt ggtcgtcatc aacaacatga tcgacgtcgc cgcgacctcc acgcaggtgg
     1501 cctggctcaa ggccgacctt gcagcgcacc cgaccaagtg caccctcgcg tactggcact
     1561 atcccctctt cagctctggt gaccacggca accagacgaa gatgcgcccg gtgtggcagg
     1621 cgctttacga cgcgggcgct gacctggtgc tgaacgggca cgaccacgac tacgagcgct
     1681 tctcgccgca ggacccgaac ggcgtggccg acgccgcgcg tgggatccgg gagttcgtcg
     1741 tcggcaccgg cggggcgagt cactacaggt tcaacgtcat ccagccgaac agcgaggtgc
     1801 gcgaccagac cgcctcaggc ttgctcaagc tgacgctcca cgcgacgagc tacgactggg
     1861 agttcgtccc gatcaccggc cagacgttca ccgacaaggg caccggcacc tgtcactgac
     1921 ccttacccgt cggctacgcg tccacgacgc agggctggca cggcgcaggg gctgcgcgcc
     1981 gtgtcggtcc gccggcactc ttacgcgagg gctcgatatg cgtgtctcct tattcctcag
     2041 gcgtgccggg cgagtcggcg gtgcgctgct tggcgccgcg ctcgtcgggg cgtgcgccga
     2101 tccggtcgcg accgggccgc tcgctccggc gtcggtgtcg gtggcaccgg tgacgacgag
     2161 cgtcgccatc ggtgcgacgg cgctgctcgc ggccaccgta ctcgacgccg acggccaacg
     2221 cgtcaccgac gtgccggtct cctggcgcag ctccgacccg gcactcgcta aggtctcgga
     2281 atccggcgtc gtaacggggg tggcggtcgg cactgccacg atcacggcgc gcgccgacac
     2341 ccggcagggc accgctcaga tcaccgtgta ctccgcagga agctccgccg gaaccgttga
     2401 cttcgcggcg atcaagcgcg gcatccggcc gcgcggcttc ggcgccaccc cgtacacgca
     2461 ccgtgcgccg gcgtccggcg cgcgggtgtg gtacgtcgct ccgggcggga gcgacgcggc
     2521 cgccgggacc gacgccgctc cactgaagac catcaaccgc gccgcgcagc tcgcccaggc
     2581 gggggatgtg gtcaccatcc gcgccggcac gtatgacgag gccgtttcgg tggcgcactc
     2641 gggaaccgtg gataagcccg tcgtcatcca ggcggccgag cgcgggacgg tcgtgctcac
     2701 gggcgggcgg aacatgttca agccagccag cgacgcggtc ggctacgtgg cagtacgagg
     2761 tctgattttc cgccgctaca gcgacccgct gaccagtgac cagggtatcg ccgccctgcg
     2821 cgcggcgcag gggtgggtgg tggaggacgc gctcttcgac gaggcggggc gcatcgcgat
     2881 ctcgatcctc ggcagtggcg cggagatcac ccgcaccacg atccagcgaa gctacgtgga
     2941 cgcgatccac gcctggacgc ccaccgacgc ggccaccggt ccgaccgatc ccgcgtacgc
     3001 gccgctcacc ggcattcgca tcacggacgt ggtgctcctc gagaacaatg tcacgcccaa
     3061 cccgctggtg ggcagcgttg ccgagtacgt ggcgaagttg tggggcacca ggggcgcgct
     3121 catcgacaac atcgagagct acgggaacaa cgggcccggc ttctggttcg acacggacaa
     3181 ctccgactac actatccgta acagctactt ccacgacaac aagcccgtgg cgggaagcaa
     3241 caacgaatat ggcaagggcc tcttcctcga ggtgagctgg ggtcccgggc tcgtcgaacg
     3301 caacgtcttc gtgaacaacg gaggcgccgg gctcgcgctc gacaacgtgc agggcgtgca
     3361 ggtgcgcgac aatctgttcg ttggcaacgc gcactgcgtg acgttcgtga acggcgaccg
     3421 cggcaacaac ccggacgggc agcctcgctg gccgctgaag aacatcgcgg tgcacgacaa
     3481 ccagtgtcgc gactggacgg cgcgcggtgc gatggcgacg atctacggca ccttcggctc
     3541 tccggcagca atggggatcg tcgcggacgc caacacgtac gaccccctgc gcgcgaccgc
     3601 gctcgccgac tggttcagta tcggcacgtt ctcggcgctc gccgaagtgc agagcaagct
     3661 cggttgggaa cagaacgggc gcgtggcggc gatccccgtg ccctgagtcg gaacggcctg
     3721 gtgtccgggg agaggtgtgg cgcccgccgc acctcttcct gtaacgttgg gcatcctcac
     3781 aggaggctgt ttgcgcacgc gcgccattga cccggccgtg ggcctgggtg gctcactctt
     3841 cattctgggc gcactcggca tgcaccttgg cgccgcacaa caggcctggc gggaagcgcc
     3901 gcccgccgac ttcgccgccg tcatccgcgg cgtccgcccg cgcggcttcg cggcggtgcc
     3961 ctacatgctc ctcgagccag caccgggcgg gcgggagtgg tacgtgtcgc cgtcggggaa
     4021 cgactcggcg cctggcagcc gcgccgcgcc cctgcgtgcg atcgaccgcg cagcgcagct
     4081 cgcgcgcgcc ggggacgtcg tgacgatcgc gcccggcacc tacgccgaat cggtacgggt
     4141 gcgtaacagc ggcacaccgg agcggcggat cgtcttccaa gcggagcgcc gcggctcggt
     4201 ggtgctcacc ggcggccgct acactttcca gcccgcgttc tggaccggcg cgccggagcc
     4261 gcgcggccag tggta
//
LOCUS       DASSYW010000019         2532 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_404588, whole genome shotgun sequence.
ACCESSION   DASSYW010000019 DASSYW010000000
VERSION     DASSYW010000019.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2532)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2532)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2532
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_404588"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..641
                     /locus_tag="VFN38_00320"
     CDS             <1..641
                     /locus_tag="VFN38_00320"
                     /inference="COORDINATES: protein motif:HMM:NF012503.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016830 - carbon-carbon lyase activity
                     [Evidence IEA];
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="pyridoxal-dependent decarboxylase"
                     /protein_id="HET9010218.1"
                     /translation="VHLSAALRPIVNGLERADSIGFDLHKWGSLPFECACVLVRDAEL
                     HRAAFASSASYIAAMERGVIAGGLPFAERGLDLTRNFRALKVWMSFLSHGTDRLAAMI
                     EQNVQQVKRLVARIEQHPELELMAPAPLNVACFRYAPAARPDDAALDAMNEEILLQLQ
                     EHGIAVPSGTRLGGRYAIRVANVNHRSRDEDFEALIEAVVELGRGIGRLRDT"
     gene            complement(817..1833)
                     /locus_tag="VFN38_00325"
     CDS             complement(817..1833)
                     /locus_tag="VFN38_00325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2891 domain-containing protein"
                     /protein_id="HET9010219.1"
                     /translation="MTESMALTPNLASSFARLALSHVEREFPHKLDHVLSGPDDVRGP
                     RALHPIFYGSFDWHSCVHGYWLLAALLRLRPELPHTPETLALFDRQLRPNRVSGEVSY
                     LAGPLRAGFERPYGWAWLLMLTAELARNPLPDAARWSRVLQPLADIFVARLHEHLGKA
                     TYPVRVGTHFNSAFALALALEYAAVLRDESLTTLLRNKAIAWYGADRDCQAWEPGGDD
                     FLSPALMEAECMRRVLDPPEFTTWLDGFLPRLAQREPRALFEPAIVTDRTDGKIAHLD
                     GLNLSRAWCWRSLASSWPAHDPRHAAALATAETHLAASLPHITGDYMGEHWLATFALL
                     ALVG"
     gene            complement(1854..>2532)
                     /locus_tag="VFN38_00330"
     CDS             complement(1854..>2532)
                     /locus_tag="VFN38_00330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF979 family protein"
                     /protein_id="HET9010220.1"
                     /translation="NRLFIPALTIPAVTLLGTVALKSAHVGGVPIVDPKQVTQISLAF
                     GALAGLAVGLLMLRPPLSAPLHEARRLWDSVGWAAVLPQMLAALGALFATAGVGKLVA
                     GLAERWLPLGSPFAAVATYTVGMALFTMIMGNAFAAFPVMTAGIGLPLIMTRFGGDVT
                     VMAAVGMLSGFCGTLMTPMAANYNIVPAALLELPDEYAVIKAQVPTALILLVINTAIM
                     FAFVYRR"
BASE COUNT          403 a          882 c          895 g          352 t
ORIGIN      
        1 tggtccacct ctcggccgcg ctccgcccga tcgtgaacgg actcgagcgc gccgactcga
       61 tcggcttcga cctgcacaag tggggctcgc tcccgttcga gtgcgcgtgc gtcctcgtgc
      121 gcgacgcgga gctgcaccgg gcggcattcg cgtcgtccgc cagctacatc gcggcgatgg
      181 agcgcggcgt gatcgccggc ggcctgccct tcgccgaacg cgggctcgat ctcacgcgca
      241 acttccgcgc gctaaaagtg tggatgagct tcctctcgca cggcaccgac cggctcgccg
      301 cgatgatcga gcagaacgtg cagcaggtga agcggctcgt cgcgcggatc gagcagcatc
      361 cggagctgga gctgatggcg ccggcgccgc tcaacgtggc ctgcttccgg tacgcgccgg
      421 ccgctcgtcc cgacgatgcg gcgctcgacg cgatgaacga ggagatcctg ctccagctcc
      481 aggagcacgg catcgccgtg ccgtcgggga cgcgactcgg cggccgctac gcgatccggg
      541 tggcgaacgt gaatcaccgc tcgcgcgacg aggacttcga ggcgctgatc gaggcggtcg
      601 tggagctggg gcgcgggatc ggacgactgc gggacacgtg aagcatgacg gcggaaaagg
      661 gtcgcaaacc gaaccgcgtc atcgagtcga cgacgtgacg cggtcgactc ttcacgtatt
      721 gcggacctcg agggctggag tcgaccccgt cgccagtggc gtagtacgct tcacgccctc
      781 gctgtgttca cctgtcccgc tctgtcgccg accgctctac ccgacgagcg ccagcagcgc
      841 gaacgtcgcc agccagtgct cccccatgta gtcgcccgtg atgtgcggca ggctcgcggc
      901 gaggtgggtc tcggcggtcg ccagcgccgc ggcgtggcgc gggtcgtgcg ccggccagct
      961 gctcgcgagc gagcgccagc accaggcgcg gctgaggttc aggccgtcga ggtgcgcgat
     1021 ctttccgtcg gtgcggtcgg tcacgatcgc cggctcgaac agcgcgcgcg gctcgcgctg
     1081 ggcgaggcgc ggcaggaagc cgtcgagcca ggtcgtgaac tcgggcgggt cgagcacgcg
     1141 gcgcatgcac tccgcctcca tcagggcggg cgacaggaaa tcgtcgccgc cgggctccca
     1201 ggcctggcag tcgcggtccg cgccgtacca ggcgatggcc ttgttgcgga gcagcgtggt
     1261 gagcgactcg tcgcgcagca cggcggcgta ctccagcgcc agcgcgagcg cgaacgccga
     1321 gttgaagtgc gtgccgacgc ggaccggata cgtggccttg ccgaggtgct cgtgcagccg
     1381 cgcgacgaag atgtcggcca gcggctgcag cacgcgcgac catcgcgccg cgtcggggag
     1441 cgggttgcgc gccagctcgg ccgtgagcat cagcagccac gcccagccgt acgggcgctc
     1501 gaatccggcg cgcagcgggc ccgcgaggta cgacacctct cccgacacgc ggttggggcg
     1561 gagctgccgg tcgaacagcg cgagcgtctc cggcgtgtgc ggcagctccg gacgcagccg
     1621 cagcagcgcg gcgagcagcc agtatccgtg cacgcacgag tgccagtcga agctgccgta
     1681 gaagatcggg tgcagcgcgc gcgggccccg cacgtcgtcg ggcccggaca gcacatggtc
     1741 gagcttgtgc ggaaactcgc gctcgacgtg cgacagcgcg aggcgggcga agctgctggc
     1801 cagattcggc gtgagcgcca tggattccgt catccagatc tctccgtgac tccttagcga
     1861 cggtacacga acgcgaacat gatcgccgtg ttgatcacga gcaggatcag cgcggtcggg
     1921 acctgtgcct tgatcaccgc gtactcgtcg ggcagctcga gcagcgccgc cggcacgatg
     1981 ttgtagttcg ccgccatcgg cgtcatcagg gttccgcaaa agccggacaa cattccgacg
     2041 gccgccatca ccgtcacgtc accaccgaat cgcgtcatga tcagcggcag cccgatgccc
     2101 gccgtcatca cggggaaggc ggcgaaggcg ttgcccatga tcatcgtgaa cagcgccatt
     2161 cccaccgtat acgtcgccac ggccgcgaag ggactgccca gcggaagcca ccgctcggcc
     2221 agtccggcca cgagctttcc cacccccgcg gtggcgaaca gcgcgcccaa tgcggcgagc
     2281 atctgcggga gcacggcggc ccatcccacc gaatcccaga gccgccgcgc ctcgtggagc
     2341 ggcgccgaga gcggcggccg cagcatcagc agccccacgg cgagccccgc gagcgcgccg
     2401 aaagcgagcg agatctgcgt cacctgcttc ggatccacga tcggcacgcc gccgacgtgc
     2461 gcggatttca gcgccaccgt gcccagcagg gtgaccgccg gaatcgtgag cgccgggatg
     2521 aacagccggt tt
//
LOCUS       DASSYW010000020         2112 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_202265, whole genome shotgun sequence.
ACCESSION   DASSYW010000020 DASSYW010000000
VERSION     DASSYW010000020.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2112)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2112)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2112
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_202265"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..282
                     /locus_tag="VFN38_00335"
     CDS             <1..282
                     /locus_tag="VFN38_00335"
                     /inference="COORDINATES: protein motif:HMM:NF013429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIM barrel protein"
                     /protein_id="HET9010221.1"
                     /translation="QLDTGNAMVGGRDPLDLMNRYGDRYYSFHIKDAPALRAPHDVDL
                     GKGTVDLRGILSRVKDIDEKYFYVEQETYEGSPLAAVERDYNYLSKLTF"
     gene            complement(286..1668)
                     /locus_tag="VFN38_00340"
     CDS             complement(286..1668)
                     /locus_tag="VFN38_00340"
                     /inference="COORDINATES: protein motif:HMM:TIGR00791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015295 - solute:proton symporter activity
                     [Evidence IEA];
                     GO_process: GO:0015718 - monocarboxylic acid transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate:H+ symporter"
                     /protein_id="HET9010222.1"
                     /translation="MPLLWVVVGVALMLVLMLVVKLDAFFALILTSFVVALLNGMDLL
                     GALQSILKGIGNTMGGVALMLVFGAMLGRLLDESGAAQAIATRFIDITGRKHIQFAMA
                     TTGLLVGIAMHYNAGFLVLIPLVYTVALTTGLPLVYVGLPLASALSVTHGFTPPHPAP
                     TFLTLLYHADVNQTLLVGLIAAIPAALLGGIVFSRVLRIRDLTPPEGLVRGAPLERDA
                     LPGFGMSLVTALVPVILMLTNAIVDISLGTAGIDPAKPDYGTQLAAAVPQPALRLLVT
                     GLKFFGNPNVALMIAVLFALYALGVRRGRSMDSLMRSIQGGVASIAGILLIIAAGGAF
                     SQVLRDGGVSDYITRQAAQIHVNPLILAFGVAALLRASIGSATVAGMTAAGVLAPTVA
                     GSAVHPELMVLATGAGSLMFSHFNDSGFWMFKEYFNATIRETLLTWSMMELIVGLTGL
                     AVALLLNLVW"
     gene            1811..>2112
                     /locus_tag="VFN38_00345"
     CDS             1811..>2112
                     /locus_tag="VFN38_00345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010223.1"
                     /translation="MSLARRSGIALAIAGSALTLAAAAPRVFTPGYTYRMRISGQVTE
                     PNGKTKDYVALSGRAMVTPKGGRLDIEEASKEHGAMAEKGGYILYDPTSMMIVSPK"
BASE COUNT          376 a          734 c          704 g          298 t
ORIGIN      
        1 cagctcgaca ccggcaacgc gatggtcggc ggacgcgatc cgctcgacct catgaaccgc
       61 tacggcgacc ggtactactc gttccacatc aaggacgccc ccgcgctccg cgccccgcac
      121 gacgtcgatc tcggcaaggg caccgtcgat ctccgcggca tcctctcgcg cgtgaaggac
      181 atcgacgaga agtacttcta cgtcgagcag gagacctacg agggctcccc gctcgccgcc
      241 gtggagcgcg actacaacta tctgtccaag ctcaccttct gagcgtcacc agacgaggtt
      301 cagcagcagt gcgacggcga gtcccgtcag cccgacgatc agctccatca tgctccacgt
      361 caggagcgtc tcgcggatcg tcgcgttgaa gtactccttg aacatccaga agccgctgtc
      421 gttgaagtgc gagaacatca ggctgcccgc cccggtggcg agcaccatga gctccggatg
      481 gacggcgctc cccgccaccg tcggcgccag gacgccggcc gccgtcatcc ccgccaccgt
      541 cgccgagccg atcgaagcgc gcagcagcgc ggcgacgccg aacgccagga tgagcgggtt
      601 gacgtggatc tgcgccgcct ggcgcgtgat gtagtccgac acgccgccgt cgcgcagcac
      661 ctgcgagaat gcgccccctg cggcgatgat cagcaggatc cccgcgatgc tcgcgacgcc
      721 gccctgaatg ctccgcatca gcgagtccat cgagcgtccc cgtcgcacgc cgagcgcgta
      781 cagcgcgaag agcaccgcga tcatcagcgc gacgttcgga ttgccgaaga acttgagccc
      841 cgtgacgagc agtcgcagcg cgggctgcgg caccgccgcg gcgagctggg tgccgtagtc
      901 cggcttcgcc ggatcgatcc ccgcggtgcc gaggctgatg tccacgatcg cgttggtgag
      961 catcaggatc accggcacga gcgccgtcac gaggctcatg ccgaagccgg ggagcgcgtc
     1021 gcgctcgagc ggtgcgccgc gcacgagtcc ctcgggcggc gtcaggtcgc ggatccgcag
     1081 cacgcggctg aacacgatcc cgccgaggag cgcggcgggg atcgccgcga tgagcccgac
     1141 gagcagcgtc tggttgacgt ccgcgtggta cagcagcgtg agaaacgtcg gggccgggtg
     1201 tggcggcgtg aagccgtggg tcaccgagag cgccgacgcg agcggcagcc cgacgtacac
     1261 gagcgggagg cccgtcgtca gcgccacggt gtacacgagc gggatcagca cgaggaagcc
     1321 tgcgttgtag tgcatcgcga tcccgacgag cagccccgtg gtcgccatcg cgaactggat
     1381 gtgcttccgt cccgtgatgt cgatgaaccg cgtcgcgatc gcctgggcgg cgccgctctc
     1441 gtcgagcagc cggccgagca tcgcgccgaa caccagcatc agtgccacgc cccccatcgt
     1501 gttgccgatc cccttgagga tcgactgcag cgcgccgagg aggtccatcc cgttgagcag
     1561 cgcgaccacg aacgacgtga ggatcagcgc gaagaacgcg tcgagcttca cgacgagcat
     1621 gagcacgagc atcagcgcga cgccgacgac gacccagagc aggggcatgg gatgccggaa
     1681 agggtggtgg tgggccgggc ggcgtgcggt ccgcgcgggc aatctgccgg gtctgtacgg
     1741 attccaaaag gtcctctacc ttcgatccgt cgcagcacga ctggaccgca gcacttttct
     1801 cggaggaccc atgtcactcg cccgtcgctc cggcatcgcg ctggcgatcg ccggctccgc
     1861 gctcacgctc gctgccgccg cgccgcgcgt cttcacgccc ggctacacct atcggatgcg
     1921 catctccggc caggtcaccg agccgaatgg caagaccaag gactacgtcg ccctgtccgg
     1981 acgggcgatg gtgacgccca agggcggtcg actcgacatc gaggaagcgt cgaaggagca
     2041 cggcgcgatg gccgagaagg gaggctacat cctctacgat ccgacgtcga tgatgatcgt
     2101 ctcgcccaag ga
//
LOCUS       DASSYW010000021         2518 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_257395, whole genome shotgun sequence.
ACCESSION   DASSYW010000021 DASSYW010000000
VERSION     DASSYW010000021.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2518)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2518)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2518
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_257395"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..196)
                     /locus_tag="VFN38_00350"
     CDS             complement(<1..196)
                     /locus_tag="VFN38_00350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010224.1"
                     /translation="MSNQDSRRAVDVVSSERVFDGKVFDVFRDRVRMPNNREVTVDVV
                     RHARSVVLLPVPQPGHVILIR"
     gene            complement(214..1173)
                     /locus_tag="VFN38_00355"
     CDS             complement(214..1173)
                     /locus_tag="VFN38_00355"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HET9010225.1"
                     /translation="MASQRVLVEPEQDGSRLDSFLTALLPDQSRSQLQRLIKEGHVTG
                     PVKGLRPSTPVRAGQEYAIDIPAPSTATPQPEALPLRIVFEDPDVVVLDKPAGMVVHP
                     AAGHSSGTLVNALLHHVKDLSGIGGELRPGIVHRLDRGTSGLMVVAKHDRAHQELSRQ
                     FRDREVEKEYAALVWGVVHAGRRIDAPIGRDDKDRQKMSTRARRARSAVTRVTWARHF
                     RGVSLLKVAIHTGRTHQIRVHLSAIGHPIVGDATYGGVHRRVPHDLRPVMRLERPFLH
                     AMRLSFTHPSDGRRVDFDSPLPPDLESVVDEIEAIQEPEPQAE"
     gene            complement(1183..2013)
                     /gene="lgt"
                     /locus_tag="VFN38_00360"
     CDS             complement(1183..2013)
                     /gene="lgt"
                     /locus_tag="VFN38_00360"
                     /EC_number="2.5.1.145"
                     /inference="COORDINATES: protein motif:HMM:TIGR00544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HET9010226.1"
                     /translation="MHPILFEIGGFPVYTYGLLLAAAYLLGLQFALVRAKARGLNPNR
                     VMDLGIWIIVSALVGAKAMLLIVERDRFGWSINDLMNLFRSAGVFYGGLIAAVAVALF
                     YLWRHRMPVWTVTDVFAPGIALGHVIGRLGCLFAGCCFGRATNVPWGITFDNEFARQN
                     VGTPLNVPLHPTQLYEAGAELLILGLLLTLERRGRAFPGRTFWTYMLVYGISRFIIEF
                     YRGDARGVINVLGTALSTSQFVSVLLVPLSLVMLVFLSRRYGPVTPADAAAARRVRAA
                     "
     gene            complement(1994..>2518)
                     /gene="lspA"
                     /locus_tag="VFN38_00365"
     CDS             complement(1994..>2518)
                     /gene="lspA"
                     /locus_tag="VFN38_00365"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: protein motif:HMM:TIGR00077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HET9010227.1"
                     /translation="PPIEAIALRSYARPVEIVLIAAIVAVDQITKELVRRFLPLGGDP
                     VQVIPGLLDLTHVQNSGAAFGLLNAADFPYKPLVMIAIAAIALIAIAMYATQLGFHER
                     TARVGLSLILGGAFGNLVDRALFGHVVDFVDVYWRTTHFWAFNVADAAITIGAILVLL
                     DMIGLGRQHAPHSV"
BASE COUNT          425 a          846 c          886 g          361 t
ORIGIN      
        1 gccggatcag gatgacgtgg ccgggttgcg gcaccggcag cagcaccacc gatcgggcgt
       61 ggcgcacgac gtcgaccgtc acctcgcggt tgttcggcat tcgcacgcga tcgcggaaga
      121 cgtcgaacac cttgccgtcg aagacccgct cgctcgacac cacgtcgacg gcccgcctcg
      181 aatcctgatt gctcatcgtc gttgtctgcg gaatcactcg gcctgcggtt ccggctcctg
      241 gatcgcttcg atctcgtcga ccacggactc gaggtccggc ggcagcggcg aatcgaagtc
      301 cacgcgccga ccgtcgctcg gatgggtgaa ggacagccgc atcgcgtgca gaaacggccg
      361 ctcgaggcgc atcaccggcc gcagatcgtg cggcacgcgg cggtgtacgc cgccgtaggt
      421 ggcatcgccg acgatcgggt ggccgatggc gctcaggtgc acgcggatct ggtgcgtccg
      481 cccggtgtgg atggcgactt tcagcagcga tacgccgcgg aagtggcgcg cccacgtgac
      541 gcgggtgacg gcgctgcgcg cgcgccgcgc ccgcgtcgac atcttctgcc gatccttgtc
      601 gtcgcggccg atcggcgcgt cgatccggcg gccggcgtgg acgacgcccc agacgagcgc
      661 cgcgtactcc ttctcgactt cgcgatcgcg gaactggcgc gagagctcct ggtgcgcgcg
      721 gtcgtgcttc gccacgacca tcaggccgga ggtgccgcga tcgaggcggt gcacgattcc
      781 cggccgcagc tcgccgccga tgccgctgag atccttgacg tggtgcagca gcgcgttgac
      841 gagcgtgccg ctgctgtgcc cggcggcggg gtgcacgacc atccctgccg gcttgtccag
      901 caccacgacg tcgggatcct cgaagacgat gcgcagcggc agcgcctccg gctgcggcgt
      961 tgccgtcgac ggcgccggga tgtcgattgc atattcctgt ccggcgcgca ccggcgtgct
     1021 cggccgcagg ccttttaccg gaccggtgac gtgcccctcc ttgatcagcc gctgcagctg
     1081 cgatcgcgac tggtcgggga gcagcgccgt caggaagctg tccagccggc tgccatcctg
     1141 ctccggctcg acgaggacac gctggctggc catgcgcctc ctttacgccg cgcgaacgcg
     1201 ccgcgccgcg gccgcgtcgg caggcgtgac cggcccgtag cgccggctga ggaagaccag
     1261 catcaccagg ctgagcggca ccagcagcac cgacacgaac tgcgacgtcg acagcgccgt
     1321 gccgaggacg ttgatgacgc cgcgcgcgtc gccgcgatag aactcgatga tgaaccgcga
     1381 gatcccgtag accagcatgt aggtccagaa cgtccggccg gggaaggcgc ggccgcggcg
     1441 ttcgagcgtc agcagcaggc cgaggatcag gagctcggcg ccggcttcgt agagctgcgt
     1501 cggatggagc ggcacgttga gcggcgtgcc gacgttctgg cgcgcgaact cgttgtcgaa
     1561 ggtgatgccc cacggcacgt tcgtcgcgcg cccgaagcag cagcccgcga acagacaccc
     1621 gaggcggccg atcacgtggc ccagcgcgat gccgggcgcg aacacatcgg tcaccgtcca
     1681 cactggcatg cggtgccgcc acaggtagaa cagcgccacg gcgacggcgg cgatcaaccc
     1741 accgtagaac accccggccg acctgaacag gttcatcagg tcgttgatgc tccaaccgaa
     1801 gcgatcgcgc tcgacaatca gcagcatcgc cttggcgccg acgagagcgc tgacgatgat
     1861 ccagatgccg aggtccatca cccggttcgg gttcagcccc cgcgctttgg cgcggacgag
     1921 ggcgaactgc aggccgagca ggtaggcggc ggcgagcagc aggccgtacg tgtagacggg
     1981 gaacccgccg atctcaaaca gaatggggtg catgctgccg tcccaggccg atcatatcga
     2041 ggaggacgag aatcgcaccg atcgtgatgg cggcgtcggc gacgttgaac gcccagaagt
     2101 gcgtcgtccg ccagtagacg tcgacgaaat cgacgacatg gccgaagagc gcgcgatcga
     2161 cgaggttgcc gaacgcgccg ccgaggatga gcgacagccc gacgcgcgcg gtccgctcgt
     2221 ggaacccgag ctgcgtggcg tacatcgcga tggcgatgag ggcaatggcc gcaatcgcga
     2281 tcatcaccag cggcttgtag ggaaagtcgg cggcgttcag caggccgaac gcggcgcccg
     2341 agttctgcac gtgcgtcaga tccagcagac cggggatgac ctggacggga tcgccgccga
     2401 gcgggaggaa gcggcgcacc agctccttgg tgatctgatc gacggccacg atcgcggcga
     2461 tgaggacgat ctcgaccggc cgcgcgtagc tgcgcagcgc gatcgcttcg atcggagg
//
LOCUS       DASSYW010000022         2829 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_220446, whole genome shotgun sequence.
ACCESSION   DASSYW010000022 DASSYW010000000
VERSION     DASSYW010000022.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2829)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2829)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2829
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_220446"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1347
                     /gene="thrS"
                     /locus_tag="VFN38_00370"
     CDS             <1..1347
                     /gene="thrS"
                     /locus_tag="VFN38_00370"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004829 - threonine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006435 - threonyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HET9010228.1"
                     /translation="RQMLQRIYGTAWFRKEELDQYLFRLEEAKKRDHRKLGRELDLFQ
                     FHPVSPGAAFWTPRGTILYNALVDFVRDRQRAAFEEIKTPLIYTKALWEQSGHWGKYR
                     ENMFLILDNESGEHDMSLKPMNCPSHYIYFNSAKHSYRELPLRLVTFDVLHRNELTGA
                     LSGLTRVRQFAQDDCHVFLREDQIAEEVRFLLDFILGHYRAFGLEATLKFATRPEQRI
                     GDDAMWDRAESSLRSALEATGMKYEMKPGDGAFYGPKIDFDVTDSLGRAWQLGSIQLD
                     YANPENFDLQYVGQDNAVHRPVIIHRAVSGSFERFIAILIEHFAGAFPTWLAPEQVRV
                     LPISEEQAPAAEQIVARMKAAGLRAQLDARSETLKYRVAEGARMKLPYMCVIGRREVE
                     GDQVAVNTRGAGEGQKPAPVGVDEFIARVKREIETRALTLTAGEGGRSVVSPNAAG"
     gene            1401..2603
                     /locus_tag="VFN38_00375"
     CDS             1401..2603
                     /locus_tag="VFN38_00375"
                     /EC_number="2.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acetyltransferase"
                     /protein_id="HET9010229.1"
                     /translation="MPDKSRIPVIVAAARTPIGKFLGSLASVSAPELGATAIRAALAR
                     SGVPAGEVQEVIMGNVVQGGVGQAPARQAMLKAGVPSSVSALTINKVCGSGLKAVMLA
                     AQSIKAGDAQVVVAGGQESMSSAPFYVYGMRNGVKLGDQKMVDGMIKDGLWCASCDVH
                     MGGHAEYTAKKASITRAQQDEFSAASHRKAVAAQGAGKFAAEMAPVTIPGKKGDTTVD
                     TDEGPRADTTADVLAKLRPAFGKGDDATVTAGNASSLNDGGAAVVVTSLAFAEAHGLQ
                     VLGHISAYATGAVDPQELFFAPVTAVKNLMKKEGKTIGDYGLIEANEAFAAQALADGA
                     GLGWNWDRVNFNGGAIALGHPIGASGARVLTTLLYAMQDRNADSGLATLCLGGGDAVA
                     LSVTREKN"
     gene            2604..>2829
                     /locus_tag="VFN38_00380"
     CDS             2604..>2829
                     /locus_tag="VFN38_00380"
                     /inference="COORDINATES: protein motif:HMM:NF014669.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015225 - biotin transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015878 - biotin transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biotin transporter BioY"
                     /protein_id="HET9010230.1"
                     /translation="MTTLALAARSPRTRALSIVVAAGALALAAQFALPLPGTPVPLTL
                     QPFVIVLAGLLLGPADAAAAMVLYLVAGAAG"
BASE COUNT          447 a          998 c          993 g          391 t
ORIGIN      
        1 cggcagatgc tccagcgcat ctacggcacg gcgtggttca ggaaggagga gctggaccag
       61 tacctcttcc ggctggagga ggcgaagaag cgcgaccacc ggaagctggg gcgcgagctc
      121 gatctgttcc agttccatcc ggtgtcaccg ggcgcggcgt tctggacgcc gcgcggcacc
      181 atcctgtaca acgcgctggt ggacttcgtg cgcgaccgcc agcgcgcggc gttcgaggag
      241 atcaagacgc cgctcatcta cacgaaggcg ctgtgggagc agtccgggca ctggggcaag
      301 tatcgcgaga acatgttcct cattctcgac aacgagagtg gggagcacga catgtcgctc
      361 aagccgatga actgcccctc gcactacatc tacttcaact cggcgaagca ctcgtaccgc
      421 gagctgccgc tgcggctggt caccttcgac gtgctgcacc gcaacgagct cacgggcgcg
      481 ctgtccgggc tcacccgcgt gcgccagttc gcccaggacg actgccacgt cttcctccgc
      541 gaggaccaga tcgcggagga ggtgcgcttc ctcctcgact tcatcctcgg gcactaccgc
      601 gccttcgggc tggaggcgac gctgaagttc gccacccgcc ccgagcagcg catcggcgac
      661 gacgcgatgt gggaccgcgc cgagtcgagc ctgcgcagcg cgctcgaggc gacggggatg
      721 aagtacgaga tgaagccggg cgacggcgcc ttctacggcc cgaagatcga cttcgacgtc
      781 accgactccc tcggccgcgc ctggcagctg ggcagcatcc agctcgacta cgcgaacccg
      841 gagaacttcg acctccagta cgtcgggcag gacaacgcgg tgcaccgccc ggtgatcatc
      901 caccgcgcgg tgagcggctc gttcgagcgg ttcatcgcca tcctcatcga gcacttcgct
      961 ggcgccttcc ccacctggct cgcgccggag caggtgcgcg tgctgccgat ctccgaggag
     1021 caggccccgg cggcggagca gatcgtcgcg cgcatgaagg cggccggcct ccgggcccag
     1081 ctcgacgcgc gcagcgagac cctcaagtac cgggtggccg agggggcgcg gatgaagctg
     1141 ccctacatgt gcgtgatcgg ccgccgcgag gtggaagggg accaggtggc ggtgaacacg
     1201 cgcggggcgg gcgagggaca gaagccggcg ccggtagggg tcgacgagtt catcgcgcgg
     1261 gtgaagcggg agatcgaaac gcgggcgctg acgctcaccg cgggtgaggg gggccgatcc
     1321 gttgtatccc ccaacgccgc cggatagctt tccggcttcc cggcgcgttc cgcgcggggc
     1381 cgaccagagc gaccaatcac atgccggata aatcgcgcat tcccgtcatc gtcgccgccg
     1441 cgcggacgcc gatcggcaag ttcctcggct ccctcgcctc ggtgtccgcc cccgagctgg
     1501 gcgccacggc catccgggcc gccctcgcca ggtccggcgt gccggcgggc gaggtccagg
     1561 aagtcatcat gggcaacgtc gtccagggcg gcgtggggca ggcgcccgcg cggcaggcga
     1621 tgctcaaggc gggcgttccc tccagcgtca gcgcgctcac catcaacaag gtgtgcggct
     1681 ccggtctcaa ggcggtgatg ctcgccgccc agtccatcaa ggcgggcgac gcgcaggtcg
     1741 tcgtcgccgg cgggcaggag tccatgtcga gcgcgccgtt ctatgtgtac ggcatgcgca
     1801 acggcgtgaa gctcggcgac cagaagatgg tcgacgggat gatcaaggac ggcctctggt
     1861 gcgcctcctg cgacgtccac atggggggcc acgccgagta cacggcgaag aaggcgagca
     1921 tcaccagggc ccagcaggac gagttctccg ccgcgtcgca ccgcaaggcg gtggcggccc
     1981 agggggcggg gaagttcgcc gccgagatgg cgccggtgac gatccccggc aagaagggcg
     2041 acaccacggt ggacaccgat gaggggccgc gcgccgacac cacggcggac gtcctggcga
     2101 agctgcgtcc cgcgttcggc aagggcgacg acgccaccgt cacggcgggc aacgcgagct
     2161 cgctcaacga cggcggcgcc gccgtggtcg tcacctcgct cgccttcgcc gaggcgcacg
     2221 gcctccaggt gctgggacac atcagcgcct acgccaccgg cgccgtggat ccgcaggagc
     2281 tgttcttcgc gccggtgacg gcggtgaaga acctgatgaa gaaggaaggg aagaccatcg
     2341 gcgactacgg cctcatcgag gccaacgagg ccttcgccgc gcaggcgctc gccgacgggg
     2401 ctgggctcgg gtggaactgg gaccgcgtga acttcaacgg cggcgccatc gccctcggcc
     2461 atcccatcgg cgcgagcggt gcccgcgtcc tcaccaccct gctgtacgcc atgcaggacc
     2521 gcaacgccga cagcggtctc gccacgctct gcctcggtgg gggcgacgcg gtcgccctct
     2581 ccgtcacccg ggagaagaac tagatgacga cgctcgccct cgccgcccgc tcgccccgca
     2641 cgcgcgccct ctccatcgtc gtcgccgcgg gcgcgctcgc gctggcggcg cagttcgcgc
     2701 tgccgcttcc gggcaccccg gtgcccctca ccctgcagcc gttcgtcatc gtgctcgccg
     2761 gcctgctgct cggcccggcc gacgcggcgg cggccatggt gctctacctg gtcgcgggcg
     2821 cagccgggc
//
LOCUS       DASSYW010000023         3006 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_662442, whole genome shotgun sequence.
ACCESSION   DASSYW010000023 DASSYW010000000
VERSION     DASSYW010000023.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3006)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3006)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3006
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_662442"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1703)
                     /locus_tag="VFN38_00385"
     CDS             complement(<1..1703)
                     /locus_tag="VFN38_00385"
                     /inference="COORDINATES: protein motif:HMM:NF013179.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HET9010231.1"
                     /translation="MWNRRSAVRDAVVRFELRHAEALLQTGALQTAIFNSAYFSSIAT
                     DAKGVIQIFNVGAERMLGYTAADVVNQITPADISDPDELIARATALSLELATPIAPGF
                     DALAFKASRGIEDIYELTYVRKDGSRFPAVVSVTALRDAKDAIIGYLLIGTDNTARKQ
                     AEAALLKAGALQTAIFNSANFSSIATDAKGVIQIFNVGAERMLGYTAAEVMNQITPAD
                     ISDPDEVIARARALSLELGTPITPGFDALVFKASRGIEDIYELTYIRKDRSRFPAVVS
                     VTALRDAQGTIIGYLLIGTDNTARKQVEEERMKLDQRLRDQHFYTRSLIESNIDALMT
                     TDPRGIITDVNKQTEALTGCTRDELIGAPFRNYFTDAARAEAGINRVLAEGTVPDYEL
                     TARARDGKLTVVSYNATTFHDRDRRLQGVFASARDMTQLQRFEHALRQKNAELEDASR
                     MKSEFLANMSHELRTPLNAIIGFSEVLSDGLVGDLTDKQRGFIGDIFRSGKHLLSLIN
                     DILDLSKVEAGKMILDLEEVPVAALFANSLSIVKGQAEARHVQLEVTGTDGLGTIRAD
                     AR"
     gene            complement(1874..>3006)
                     /locus_tag="VFN38_00390"
     CDS             complement(1874..>3006)
                     /locus_tag="VFN38_00390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA polymerase domain-containing protein"
                     /protein_id="HET9010232.1"
                     /translation="HLFASGVAQRVVKADVASLYPSLMRAYRIGPARDRLGALLALVD
                     GLVERRLDAKARARAAAPGSAERHGHEAMSAALKIVVNSAYGYLAAGGGLTRFADVHA
                     ANEVTRRGREVLALLCRELAARGVTLLEADTDGVYFAVPETWDEADERRIVAEVDALL
                     PPLVQLELDGRYAAMLSHEPKNYALLGHDGTLILRGVAFRSSRSEPFGDAFLRVAITR
                     LLSGDVAGVRAAYLATIQALRARALPTHDVSSRVRLTKSPAAYLESRGRRRELPYEAL
                     LSSGRTTWSVGERVLVYRRAHGESALASGSADESATADRRDYDAEHYVRLLRTTYAER
                     LSRAFSAEDFAVLFAGPDQLALFAPAIDSIRPILRRLPAPGQ"
BASE COUNT          431 a         1030 c         1069 g          476 t
ORIGIN      
        1 cgcgcatcgg cccggatcgt tccgagcccg tccgtgccgg tcacctccag ctggacgtgc
       61 cgcgcctcgg cctgcccctt cacgatggac aggctgttgg cgaacagcgc cgccaccggc
      121 acctcctcga gatcgaggat catcttgccg gcttccacct tcgacaggtc gagaatgtcg
      181 ttgatcagcg agagcaggtg cttgccgctc cggaagatgt ccccgatgaa cccccgctgc
      241 ttgtccgtca ggtcgcccac cagcccgtcg ctgaggacct ccgagaagcc gatgatggcg
      301 ttgagcggcg tccgcagctc gtgcgacatg ttggcgagga actcggactt catgcggctc
      361 gcgtcttcca gctcggcgtt cttctgccgc agcgcgtgct cgaaccgctg gagctgcgtc
      421 atgtcgcgcg ccgaggcgaa caccccctgg aggcgccggt cccggtcgtg gaaggtggtg
      481 gcgttgtagg acaccaccgt cagcttgccg tcgcgcgcgc gcgcggtgag ctcgtagtcg
      541 gggaccgtgc cctcggccag cacgcgattg atccccgcct cggcgcgggc cgcgtcggtg
      601 aagtagttcc tgaacggcgc gccgatcagc tcgtcgcgcg tgcaccccgt gagcgcctcc
      661 gtctgcttgt tgacgtcggt gatgatgccg cgcggatcgg tggtcatcag cgcgtcgatg
      721 ttggactcga tcagcgagcg ggtgtagaag tgctggtcgc gcagccgctg gtcgagcttc
      781 atccgctctt cttccacctg cttgcgcgcc gtgttgtcgg tgccgatgag caggtagccg
      841 atgatcgtcc cctgcgcgtc gcgcagcgcc gtcacagaca ccacggcggg gaagcggctc
      901 cggtccttgc ggatgtacgt cagctcgtag atgtcctcga tcccacggga cgccttgaac
      961 accagcgcgt cgaagccggg ggtgatcggg gtcccgagct ccaggctgag cgcccgcgcc
     1021 cgggcgatca cctcgtccgg gtcggagatg tcggccgggg tgatctggtt catcacctcg
     1081 gcggcggtgt acccgagcat gcgctcggcg cccacgttga agatctggat gacgcccttg
     1141 gcgtcggtcg cgatgctcga gaagttggcg ctgttgaaga tcgccgtctg gagcgccccc
     1201 gccttgagca gggccgcctc cgcctgcttg cgggcggtgt tgtccgtccc gatcagcaga
     1261 tagccgatga tggcgtcctt cgcgtcgcgc agcgccgtca ccgaaacgac ggcggggaag
     1321 cggctgccgt ccttgcggac gtacgtcagc tcgtagatgt cctcgatgcc gcgggacgcc
     1381 ttgaaggcga gggcatcgaa ccccggggcg atgggcgtcg cgagctccag gctgagcgcg
     1441 gtggcgcgcg cgatcagctc gtccgggtcg gagatgtcgg ccggcgtgat ctggttcacc
     1501 acgtccgccg ccgtgtaccc gagcatgcgc tcggcgccca cgttgaagat ctggatgacg
     1561 cccttggcgt cggtggcgat gctggagaaa tacgcgctgt tgaagatcgc cgtctggagg
     1621 gcgccggtct ggagcagcgc ctcggcatgg cggagctcga accgtacgac cgcgtcccgt
     1681 acggcgcttc tgcggttcca catccggctg acccctggtt tcccgttgat cccggcgctc
     1741 gagcgagctt ggagactgag gatcaattgg agatgacagc cgctgggaga tgcggcatca
     1801 ggagcaattg gccgacggcc gacgggggtg actcgcgcgt ggatactgca aggaaccggc
     1861 cgcgtgcgtg accctattgg ccgggagcgg ggaggcgcct caggatgggg cgaatcgagt
     1921 cgattgcggg cgcgaacagc gccagttgat ccgggccggc gaacagcacc gcgaagtcct
     1981 ccgccgagaa ggcacgcgac agccgctccg catacgtcgt gcggaggagg cgcacgtaat
     2041 gctccgcgtc gtagtcgcgc cggtccgctg tcgcggactc gtccgccgat ccggacgcga
     2101 gggcgctctc gccgtgcgcc cggcggtaga ccagcacgcg ctcgcccacg ctccaggtgg
     2161 tccgtccgct cgagagcaac gcctcgtacg gcagctcgcg gcgccggccc cgcgactcga
     2221 ggtacgccgc gggcgacttc gtgagcctca cgcgcgacga gacgtcgtgc gtcgggagtg
     2281 cgcgggcgcg cagcgcctgg atcgtcgcga ggtacgccgc gcggacgccg gccacgtccc
     2341 ccgacaggag ccgggtgatc gcgacccgga gaaaggcgtc gccgaacggc tccgagcggc
     2401 tcgagcggaa cgcgacgccg cggaggatca gcgtgccgtc atgaccgagg agcgcatagt
     2461 tcttcggctc gtgcgagagc atcgccgcat aacggccgtc cagctcgagc tgcacgagcg
     2521 gcggcagcag ggcgtccacc tcggccacga tgcgtcgctc gtccgcctcg tcccacgtct
     2581 ccggcacggc gaagtacacc ccgtccgtgt cggcctccag cagggtgacc ccgcgcgcgg
     2641 cgagctcgcg gcagagcagg gcgagcacct cgcggccgcg gcgcgtcacc tcgttggcgg
     2701 cgtgcacgtc ggcgaagcgg gtgagcccgc cgccggcggc gagatagccg taggccgagt
     2761 tcacgacgat cttcagcgcg gccgacatcg cttcgtgccc atggcgttcc gccgacccgg
     2821 gcgcggccgc gcgcgcgcgg gccttcgcgt cgaggcggcg ctccaccagt ccatccacga
     2881 gcgcgagcaa cgcgccgagc cggtcgcgcg ccgggccgat gcggtacgcg cgcatcagcg
     2941 acgggtacag gctcgcgacg tcggccttca ccacgcgctg cgccaccccc gacgcgaaga
     3001 gatgcc
//
LOCUS       DASSYW010000024         2067 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1657589, whole genome shotgun sequence.
ACCESSION   DASSYW010000024 DASSYW010000000
VERSION     DASSYW010000024.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2067)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2067)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2067
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1657589"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(64..1128)
                     /locus_tag="VFN38_00395"
     CDS             complement(64..1128)
                     /locus_tag="VFN38_00395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010233.1"
                     /translation="MADTIALASPRTDDAGPYIGSRFADVVDALAANPYQRVWGAAGE
                     PPLPVHDVSFRTVVGGLFPRQFRADSVRTLDSRIDLRWGADGKGFRRLVHPNGVCLTG
                     RWTIHEETPYTGYFAKGSSALIVGRYSTCCTETRRGQTRSLSLVGKLFPTTDRYHLEP
                     LPTANFFTQEDIGGAKTEFINDAELRNAPDVTLGNRGAAGTPLLITIGLVFRNVDQQG
                     SMRQLYPIAELGKPDGTPTRAPQFMRLLVAPEQPRIPGTDLDFRDEVMAQIFDKGDPL
                     PKRTLTFTIELTDDGETGGSASRQRVTCRNWRKVGTVVFDNAVVSHNGDAVIHFSHPT
                     WRTDRNDPATATRRDGRKVR"
     gene            1210..>2067
                     /locus_tag="VFN38_00400"
     CDS             1210..>2067
                     /locus_tag="VFN38_00400"
                     /inference="COORDINATES: protein motif:HMM:NF016228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HET9010234.1"
                     /translation="MRILVTGSAGHLGEALMRTLPGAGHEPIGVDLKPSPFTHHVGTI
                     VDRAFVSGCMRGIEAVLHAATLHKPHVATHSRQDFVDTNVTGTLNLLEEAAAAGVRAF
                     VYTSTTSAFGRALTPPAGAPAAWITEDVAPVPRNIYGVTKTAAEDVCELIHRDHGLPC
                     LILRTSRFFPEPDDRAEARDAYDDANLKVNELLYRRVDLEDVVGAHRLALERAPAIGF
                     ARYIVTATTPFDRNDLAELRTDAAAVVRRRFPRCQAVYERLGWRLLPSIERVYVNDRA
                     RRELGWSPLY"
BASE COUNT          322 a          706 c          707 g          332 t
ORIGIN      
        1 gcccccgcca cccgaaccga agtagccgcc ggtcttgaga ccggccccag tgataggccg
       61 ccgctatcga actttccggc cgtcgcggcg cgtggcggta gccggatcgt tccggtcggt
      121 gcgccacgtc gggtggctga agtggatcac cgcgtcgccg ttgtgcgaga cgacggcgtt
      181 gtcgaagacc acggtgccca ccttccgcca gttcctgcag gtgacccgct gccgtgaggc
      241 cgacccgcct gtctcgccgt cgtcggtcag ctcgatcgtg aaggtcaacg tgcgcttcgg
      301 gagcgggtcg cccttgtcga agatctgcgc catgacctcg tcgcggaagt cgaggtccgt
      361 gccgggtatc cgcggctgtt ccggcgcgac gagcaggcgc atgaactgcg gggcgcgcgt
      421 cggggtgcca tccggcttgc ccaactccgc gatcggatag agctgccgca tcgaaccctg
      481 ctggtcgaca ttgcggaaca cgagcccgat cgtgatgagc agcggcgtgc cggcggcgcc
      541 gcgattgccg agcgtcacgt cgggtgcgtt gcgcagctcg gcgtcgttga tgaactccgt
      601 cttcgcgccg ccgatgtctt cctgcgtgaa gaaattggcc gtcggcagcg gctcgaggtg
      661 gtagcggtcg gtggtgggga agagctttcc gacgagcgag agcgaccgcg tctgcccgcg
      721 cctggtttcg gtgcagcacg tcgagtagcg gcccacgatg agggcgctgc tccctttcgc
      781 gaagtagccc gtgtagggcg tctcctcgtg gatcgtccag cggccggtga ggcacacccc
      841 gttcggatgc accagccgcc ggaacccctt gccatcggca ccccaacgca gatcgatccg
      901 cgagtcgagc gtacggacgc tgtcggcgcg gaactgccgc ggaaacaggc cgccgacgac
      961 cgtccggaac gagacgtcgt gcacgggaag cggcggttcg ccggcggcgc cccacacgcg
     1021 ttggtaggga ttggccgcga gcgcgtcgac cacatcggcg aagcgcgacc caatgtacgg
     1081 cccagcgtcg tcagtcctcg gagaagcgag cgcgatggtg tcggccatgg cggcgactat
     1141 acgctcctgt cgcggcgctt caagctcgac tggcctgccg gacgtcaatc agggatcatt
     1201 tcgacactca tgaggattct ggtcacgggc agcgcggggc atctgggcga ggcgctgatg
     1261 cgcacgctgc caggcgcggg gcacgaaccg atcggcgtcg atctcaagcc gtctccgttc
     1321 acccatcacg tcggcacgat cgtggatcgc gcgttcgtca gcggctgcat gcgcggcatc
     1381 gaggcggtgt tgcacgccgc gacgcttcac aagccgcacg tcgcgaccca cagccgtcag
     1441 gacttcgtgg acaccaacgt caccggcacg ctgaacctgc tcgaagaagc cgccgctgcc
     1501 ggcgtgcgcg cgttcgtcta caccagcacg acgagcgcct tcggcagggc tctcacgccg
     1561 cccgccggag cccccgcggc atggatcacc gaggacgtcg cgccggtgcc gaggaacatc
     1621 tacggcgtga cgaagacggc ggccgaggac gtgtgcgagc tcatccatcg cgaccacggc
     1681 cttccgtgtc tgatcctgag aacgtcgcgc ttctttccgg agcccgacga tcgcgcggag
     1741 gcacgggacg cctacgacga cgcgaacctc aaggtgaacg agctcctgta ccgccgggtc
     1801 gacctcgagg acgtggtcgg tgcccaccgg ctcgcgctcg agcgcgcacc ggccatcggg
     1861 ttcgcccgct acatcgtcac cgcgacgacg ccgttcgatc gcaacgacct ggccgagctg
     1921 cgtacggatg cggcggccgt cgtacgccgt cggtttcctc gctgccaggc cgtctacgag
     1981 cgcctgggct ggaggctgct tcccagcatc gagcgcgtct acgtcaacga ccgagcgcga
     2041 cgagaactgg gctggtcacc tctgtac
//
LOCUS       DASSYW010000025         3730 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_349230, whole genome shotgun sequence.
ACCESSION   DASSYW010000025 DASSYW010000000
VERSION     DASSYW010000025.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3730)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3730)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3730
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_349230"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..652)
                     /locus_tag="VFN38_00405"
     CDS             complement(<1..652)
                     /locus_tag="VFN38_00405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HET9010235.1"
                     /translation="MKSLFARKPISELLVEGDHPNALKRALGAGDLIMLAIGAVIGAG
                     IFGAIGTAAAGQLGPNGEVIRSGAGPALVFSFLLLGGVCALAALCYAELASMIPQAGS
                     AYAYTYATLGEIVAWIIGWDLILEYAVGNVAVAISWGDYFKTLTGGLLNLPVWLTTGY
                     RTALLSSDPGIHGLLASAPRVAGIPILVNLPAFAIVAIITWVLLRGVRESARANNIM"
     gene            complement(675..2861)
                     /locus_tag="VFN38_00410"
     CDS             complement(675..2861)
                     /locus_tag="VFN38_00410"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF001953.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-translocating pyrophosphatase"
                     /protein_id="HET9010236.1"
                     /translation="MTQTQSSLLTVVIGASALALIFAVFLARWVLSRGRGTPEMQKIS
                     NAIQQGAEAYLARQYKTIGLLSVVVAALLGIGYGYFRHTTANDPVQDPRTFALYVTAS
                     FLLGALSSGVAGYVGMWVSIRTNIRVAAAAMTSLNDALQTALRGGAVSGLFTVAMSLL
                     GVGGLFAALSAMTPAGMDQAEWSQHIPFLIVGYGFGASFVALFAQLGGGIYTKAADVG
                     ADLVGKVEAGIPEDDPRNPAVIADLVGDNVGDCAGRGADLFESTAAENIGAMILGVLL
                     YKSFGINGILFPLVIMALGLICSIVGVMVVKTKEDADPMKALNFGYYVTAALVTVMFF
                     FASKTLLQVATAPDAWWHFFLCGVIGIITSVAFVFITQYYTEYRYRPVLSIAEASQTG
                     PATNIIAGLAVGMESTVLPVITIGIAIIASYSLGQASGLVNDAGQAIGGLFGTAVATM
                     GMLGTAGYILAMDVFGPITDNAGGIVEMSRQPESVRDKTDRLDSVGNTTKALTKGYAI
                     GSAALAAFLLFSAYLDEVRNLTGQTLHVDLSKPVVFVAGLLGAMLVFWFSSLAMTAVR
                     KAASSVITEVRRQFKERPGIMEGTEDPDYAACVDIVTVGALKAMVLPGALVVLFPIVV
                     GVMFKRFGGPGEYIGAESVAALLMVGTITGILMAGFLNNGGGAWDNAKKYIETGAYGG
                     KRSEAHKAAVVGDTVGDPFKDTAGPSLHVLIKLLSTITLVLAPLFI"
     gene            complement(2901..>3730)
                     /locus_tag="VFN38_00415"
     CDS             complement(2901..>3730)
                     /locus_tag="VFN38_00415"
                     /inference="COORDINATES: protein motif:HMM:NF012544.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HET9010237.1"
                     /translation="FSGEWTLSYTLVVAFGAAMVGSLFSSDAWNGVTFAAAEVKNPSR
                     NLPLALLIGTGLVCVLYIVANLAYLSVLPFDGVATGATVVERGIRHATEDRVATAVVA
                     TIFGASAASIMAVAILISTFGCNNGLILSGSRVLYAMSRDGLFFKRAGTLNRNHVPAF
                     ALVVQSVWTAFLCLSGTYNQLLNYVIFAALLFYVFTTAGLFILRAKRPDIVRPYRAFG
                     YPLLPLLYILLCCGVMVLLLLSPTTRTEAVSGLVLVLIGIPVFFLWRRIERPATADA"
BASE COUNT          653 a         1236 c         1327 g          514 t
ORIGIN      
        1 ccatgatgtt gttcgcccgc gcgctctcgc gcacgccccg cagcagcacc caggtgatga
       61 tcgcgacgat cgcgaacgcc ggcaggttca cgaggatggg gatgccggcc acgcggggcg
      121 cggacgcgag cagcccgtgg atcccggggt cggagctgag gagcgccgtg cggtagccgg
      181 tcgtgagcca gacggggagg ttcagcagcc cgccggtgag cgtcttgaag tagtcgcccc
      241 acgagatggc caccgcgacg ttgccgacgg cgtactcgag gatcaggtcc cagccgatga
      301 tccacgccac gatctcgccg agcgtggcgt acgtgtaggc gtacgcgctg ccggcctgcg
      361 ggatcatcga cgcgagctcg gcgtagcaga gcgccgccag ggcgcacacg ccgccgagca
      421 ggaggaagga gaacaccagg gcgggcccgg caccgctgcg gatcacctcg ccgttcgggc
      481 cgagctgtcc ggcggccgcc gtgccgatgg cgccgaagat gccggcgccg atcaccgcgc
      541 cgatcgcgag catgatgaga tcgcccgccc cgagcgcccg cttcagcgcg ttggggtggt
      601 caccctcgac cagcagctcc gagatcggct ttcgtgcaaa gagcgatttc atcggcccgg
      661 ggtgaagggt cgcgtcagat gaacagcggc gccagcacga gcgtgatcgt gctcaggagc
      721 ttgatcagca cgtggagcga gggtcccgcg gtgtccttga acggatcgcc gacggtgtcg
      781 cccaccaccg ccgccttgtg ggcctcggag cgcttgccgc cgtacgcccc ggtctcgatg
      841 tacttcttcg cgttgtccca ggcgccgccg ccgttgttca ggaagcccgc catcaggatg
      901 cccgtgatcg tccccaccat cagcagcgcc gccaccgact cggccccgat gtattcgccc
      961 ggcccgccga accgcttgaa catcacgccg acgacgatcg ggaacagcac cacgagcgca
     1021 cccggcagca ccattgcctt cagcgcgccc accgtgacga tgtccacgca cgcggcgtag
     1081 tccggatcct ccgtgccctc catgatgccc ggccgctcct tgaactgccg gcgtacctcg
     1141 gtgatcaccg acgacgccgc cttgcgcacc gccgtcatgg cgagcgagga gaaccagaac
     1201 accagcatcg cgccgaggag gccggccacg aacaccaccg gcttcgacag gtcgacgtgc
     1261 agcgtctgtc ccgtgaggtt ccgcacctcg tcgagatacg ccgagaacag caggaacgct
     1321 gcgagcgcgg ccgatccgat cgcgtagccc ttcgtcagcg ccttcgtggt gttgcccacc
     1381 gagtcgaggc ggtcggtctt gtcgcgcacc gactccggct gccgcgacat ctccacgatg
     1441 ccgccggcgt tgtcggtgat ggggccgaac acgtccatcg ccaggatgta gccggcggtg
     1501 ccgagcatgc ccatcgtcgc gacggcggtg ccgaacagcc cgccgatcgc ctgccccgcg
     1561 tcgttcacca ggccgctcgc ctgcccgagc gaatagctgg cgatgatcgc gatgccgatc
     1621 gtgatcaccg gcaggacggt ggactccatg ccgacggcga ggccggcgat gatgttcgtc
     1681 gccggcccgg tctggctggc ctcggcgatg ctgagcaccg ggcggtaccg gtactccgtg
     1741 tagtactggg tgatgaacac gaacgcgacg gaggtgatga tgccgatcac gccgcagagg
     1801 aagaagtgcc accaggcgtc gggggccgtg gccacctgga ggagggtctt gctggcgaag
     1861 aagaacatca ccgtgaccag cgccgcggtg acgtagtagc cgaagttgag ggccttcatg
     1921 ggatcggcgt cctccttcgt cttcacgacc atcacgccga cgatggagca gatgagcccc
     1981 agggccatga tgacgagcgg gaacaggatg ccgttgatgc cgaacgactt gtagagcagc
     2041 acgccgagga tcatcgcgcc gatgttctcg gcggcggtgc tctcgaacag gtcggcgccg
     2101 cggccggcgc agtcgcccac gttgtcgccc acgaggtcgg cgatcacggc ggggttgcgc
     2161 ggatcgtctt ccgggatgcc cgcctcgacc ttgcccacca ggtcggcgcc gacgtccgcc
     2221 gccttggtgt agatgccgcc gccgagctgc gcgaacagcg cgacgaacga cgcgccgaag
     2281 ccgtagccga cgatcaggaa ggggatgtgc tgcgaccatt ccgcctggtc catgccggcc
     2341 ggcgtcatgg ccgacagcgc ggcgaacagg ccgcccacgc cgaggaggct catcgccacc
     2401 gtgaacagcc cggacaccgc cccgccgcgc agcgcggtct ggagcgcgtc gttcagcgag
     2461 gtcatggccg cggcggcgac gcggatgttg gtgcggatcg acacccacat ccccacgtag
     2521 ccggcgacgc cggagctgag cgccccgagc aggaacgacg cggtgacgta gagcgcgaag
     2581 gtccgcgggt cctggaccgg gtcgttggcg gtggtgtgcc ggaagtagcc gtatccgatg
     2641 ccgaggagcg ccgcgacgac cacggacaac aatccgatgg tcttgtactg gcgcgcgagg
     2701 tacgcctcgg caccctgctg gatggcgttg gagatcttct gcatctccgg ggtgccgcgg
     2761 ccgcgcgaca ggacccagcg cgcgaggaag acggcaaaga tcagggcgag tgcgctcgcg
     2821 ccgatgacga cggtcaggag tgacgactgc gtctgcgtca tgatgcgtgg aaagtgggaa
     2881 tgcggagggc gccggcccga tcaggcgtcg gcggtggcgg gtcgctcgat gcggcgccag
     2941 aggaagaaca cgggaatgcc gatcagcacc agcacgagac cggagaccgc ctcggtgcgc
     3001 gtcgtgggag acagcaggag gagcaccatc acgccgcagc agaggaggat gtagagcagc
     3061 ggcagcaggg gatacccgaa cgcgcggtac ggccggacga tgtcgggccg cttcgcgcgc
     3121 aggatgaaca ggccggccgt ggtgaagacg tagaacagca gcgcggcgaa gatgacgtag
     3181 ttgagaagct ggttgtaggt gcccgacagg cagaggaacg ccgtccagac ggactgcacg
     3241 accagcgcga aggcgggcac gtgattgcgg ttcagcgttc cggcgcgctt gaagaacagc
     3301 ccgtcgcgcg acatcgcgta gagcacgcgg gagcccgaca ggatgaggcc gttgttgcag
     3361 ccgaaggtgg agatgaggat cgcgaccgcc atgatcgacg ccgcgctcgc cccgaagatc
     3421 gtcgccacga ccgccgtcgc cacgcggtcc tcggtggcgt gccggatccc gcgctccacg
     3481 acggtggcgc cggtggccac gccgtcgaag gggagcacgc tgaggtaggc gaggttcgcg
     3541 acgatgtaga ggacgcacac cagccccgtc ccgatgagga gggcgagggg gaggttgcgc
     3601 gacggattct tcacctcggc cgcggcgaag gtgacgccgt tccacgcgtc gctcgagaac
     3661 agcgagccca ccatcgccgc gccgaacgcc acgacgaggg tgtaggagag cgtccactcg
     3721 ccgctgaagc
//
LOCUS       DASSYW010000026         2126 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1712736, whole genome shotgun sequence.
ACCESSION   DASSYW010000026 DASSYW010000000
VERSION     DASSYW010000026.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2126)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2126)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2126
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1712736"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..541)
                     /locus_tag="VFN38_00420"
     CDS             complement(<1..541)
                     /locus_tag="VFN38_00420"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HET9010238.1"
                     /translation="MSATPDTAPRPRDTPELLSIIVPVYNEVRTVRAVLDRLVSIDLP
                     LPREILVVDDGSTDGTGDLLSAAERDGLPVTVIRSERNGGKGSALRKGLARAQGTIVA
                     IQDADLELDPVQLGALVQPIVAGSTRVVYGSRFLHGSPRGPWLSTAANRFLTGVTNVL
                     YGAKLTDMETCYKIMRTDVA"
     gene            586..>2126
                     /locus_tag="VFN38_00425"
     CDS             586..>2126
                     /locus_tag="VFN38_00425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HET9010239.1"
                     /translation="MIRTRVLTAAAGLAAFAALASSVLFTPSYAQQPAAAVAIDNDDI
                     GGVVTGPKGPEAGVWVIAETRDLPVRYIKSVVTDDRGRFVVPDLPAASYQVWARGYGL
                     VDSDKQTAKPGQRLSITALVAPSDAVAARYYPAIYWYSMLKIPSADQFGGKSSIPARL
                     TQTQWIAAMKNTGCIGCHQLGQASTRTVPVALGTFASGADAWKRRVQSGQSGAMMFGQ
                     LQGLGEMAFHNYGDWTDRIAKGELPFAKPERPQGVERNIVITLRDWMNDKQYLHDLIA
                     SDRRFPTVNAYGPLVGSPEYSSDNLPILDPVKNVATIFTAPVRDPQMPLNLGPGHAAG
                     LDPTMPSPYWNNERIWETRVNNHNSMFGRDGRLWLAASVRGADNPAFCKAGSDHPSAK
                     AFPMDRAVRHISVLDLKTKKYSFVDTCFSTHHLQFGYDASDTLWTSGGGPVVGWLNTK
                     MFDATGDAARSQGWTALVLDTNGNGRRDDYVEPDQPLDPSKDKRVNAGFYAVMPSPVD
                     GSVWGS"
BASE COUNT          346 a          718 c          745 g          317 t
ORIGIN      
        1 gggccacgtc ggtccgcatg atcttgtagc aggtctccat atcggtgagc ttcgcgccgt
       61 agagcacgtt ggtgacgccg gtgagaaacc ggttggcggc ggtggacagc caggggccgc
      121 gcggcgagcc gtgcagaaag cgcgagccgt agacgacgcg ggtggagccg gcgacaatcg
      181 gctgcaccag cgcgccgagc tgcaccgggt cgagctcgag gtcggcgtcc tggatggcca
      241 cgatggtgcc ttgtgcgcgg gccagccctt tgcggagggc gctgcctttg ccgccgttgc
      301 gctcggaacg gatgacggta accggcagcc cgtcgcgctc ggccgccgac agcaggtcgc
      361 ccgtgccgtc ggtcgagccg tcgtccacca cgagaatttc gcgcggcagc ggcaggtcga
      421 tcgacaccag acggtcgagc acggcgcgca ccgttcgcac ctcgttgtag acgggcacga
      481 tgatggacag gagttccggg gtatcgcgcg gccggggggc cgtgtcgggc gtggcgctca
      541 agcttgtccc ccgggattat catctatccg ccaaggagcc gcaccatgat caggacccga
      601 gtgctgactg ccgccgccgg tctcgccgcg ttcgccgccc tcgcttcgtc cgtgctgttc
      661 acgccgtcct acgcgcagca gccggccgcc gccgtcgcca tcgacaacga cgacatcggc
      721 ggcgtggtca ccgggcccaa gggccccgaa gccggcgtct gggtgatcgc ggagacgcgc
      781 gaccttcccg tccgctacat caagagtgtc gtgacggacg accgcggccg cttcgtggtg
      841 cccgatctgc cggcggcgag ctatcaggtg tgggcgcgcg gctacgggct ggtggacagc
      901 gacaagcaga cggcgaagcc cggacagcgg ctgtcgatca cggcgctggt cgcgccgagt
      961 gacgccgtcg cggcgcgcta ctacccggcc atctactggt actcgatgct gaagattccg
     1021 tccgccgatc agttcggcgg caagagcagc atcccggcgc gcctgacgca gacgcagtgg
     1081 atcgcggcga tgaagaacac cggctgcatc ggctgccatc agctcgggca ggcgtccacg
     1141 cgcaccgtcc cggtggcgct cggcacgttt gcgagcggcg ccgacgcctg gaagcgccgc
     1201 gtccagtccg gccagtcggg cgccatgatg ttcggccagc tgcaggggct gggcgagatg
     1261 gcgttccaca actacggcga ctggaccgac cggatcgcca agggtgagct gccattcgcc
     1321 aagccggagc ggccgcaggg cgtggagcgc aacatcgtga tcacgctgcg cgactggatg
     1381 aacgacaagc agtacctgca cgacctgatc gcgagcgacc gccgcttccc caccgtgaac
     1441 gcctacggac cgctcgtcgg ctcgcccgag tacagctccg acaacctgcc gatcctcgac
     1501 ccggtgaaga acgtggcgac gatcttcacg gcgccggtgc gcgacccgca gatgccgctc
     1561 aacctcggtc ccgggcacgc cgcggggctc gaccccacga tgccgtcgcc ctactggaac
     1621 aacgagcgca tctgggagac gcgcgtcaac aaccacaact cgatgttcgg gcgcgacggc
     1681 cggctgtggc tggccgcgtc ggtgcgcggc gccgacaatc cggcgttctg caaggcgggc
     1741 tcggatcatc cgtcggccaa ggcgtttccg atggatcgcg ccgtgcgcca catctcggtg
     1801 ctcgatctga agaccaagaa gtattcgttc gtggacacgt gcttctcgac gcaccacctg
     1861 cagttcggct acgacgccag cgacaccctc tggacgagcg gcggcggtcc ggtggtgggc
     1921 tggctgaaca cgaagatgtt cgacgccacc ggcgacgcgg cgaggtcgca gggctggacg
     1981 gcgctcgtgc tcgataccaa tggcaacggc aggcgcgacg actacgtcga gcccgatcag
     2041 ccgctcgatc cgtcgaagga caagcgggtc aatgccggct tctacgccgt gatgccgagc
     2101 ccggtggacg gatcggtgtg gggatc
//
LOCUS       DASSYW010000027         2092 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_625499, whole genome shotgun sequence.
ACCESSION   DASSYW010000027 DASSYW010000000
VERSION     DASSYW010000027.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2092)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2092)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2092
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_625499"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..739
                     /locus_tag="VFN38_00430"
     CDS             <1..739
                     /locus_tag="VFN38_00430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010240.1"
                     /translation="IHMFGSTYGVVPEGAQESLQEIQSELAAERRVSGPFSRLLWIPQ
                     GLSIADERQRLLLDRLRLDRGMRPDTDLLETSFEDLRTLIGARLKESQKPAAVAAPAS
                     PKPGMASLYLVYDQRDEDAVAPWADLLFQSFEVVCPLFEGDERDIREAHEDALRQCDG
                     VLLFYGNANEAWLRRKLTEVQKSPGNGRTKPAAEVCVVQAPPRTQAKERFRTHYCHVV
                     AQWNGCDPSPLQPFIDVLAARGRGPSP"
     gene            736..>2092
                     /locus_tag="VFN38_00435"
     CDS             736..>2092
                     /locus_tag="VFN38_00435"
                     /inference="COORDINATES: protein motif:HMM:NF044287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010241.1"
                     /translation="MNGATAGNPFPGLRPFEAEEDHLFFGRETRVDDLLRRLRFNRFL
                     AIVGTSGCGKSSLIRCGLVPALHGGQMVKAGSSWRIAIMRPGGHPFRELAAALAGPDV
                     LDMPPSPMNVPGAALVEVAMRRGARGLVDAVRQARLPPSDNLLVVVDQFEELFRFQKT
                     RGSDGHGEAVLFVKLLLEASEQADVPVYVVTTMRSDFIGDCMEYPGLPEALNNSQYLV
                     PRMTRDELRAAITGPVAVAGAGIAPRLVQRLLNDMGSDQDQLPVLQHALMRTWDHWAN
                     RPEPRGPIDLDDYEGVGGLKEALSRHAEEAFAEASPGRQQHLVEQMFRALSDIVDDPR
                     GGRRPCAVAEIAAIAAASEAEVAQAVELFRRPGRSFLMPPVGIPLTSGTIVDLSHESL
                     MRCWTRLRAWVEEERASAAIYLRLTRAAQWYDDGTAGLWRDPELGLGLEWRLERHPTE
                     AW"
BASE COUNT          320 a          721 c          733 g          318 t
ORIGIN      
        1 cattcacatg ttcggcagca cgtatggcgt cgtgcccgag ggcgcacagg aatcgctcca
       61 ggagatccag agtgaactcg cggccgagcg ccgcgtcagc ggacccttct cgcgtctgtt
      121 gtggatccct cagggtctgt cgatcgccga cgagcggcag cgcctgctcc tcgatcgcct
      181 gcgcctcgac cgcggcatgc gcccggacac cgacctgctc gaaacgtcgt tcgaggatct
      241 gcggacgctc atcggtgcgc ggctgaagga gagccagaag ccggccgccg tcgccgctcc
      301 cgccagcccc aagccgggca tggccagcct gtatctcgtc tacgaccagc gcgacgaaga
      361 cgcggtcgcg ccgtgggccg acctgctctt ccagtcgttc gaagtggtgt gcccgctgtt
      421 cgaaggcgac gagcgcgaca tcagggaggc gcacgaggac gcgctccgtc agtgcgacgg
      481 cgtgctgctc ttctacggca acgccaatga agcctggctg cggcgcaagc tcaccgaagt
      541 acagaagagt cctggcaacg gccgcacgaa gcccgccgcg gaggtgtgcg tcgtgcaagc
      601 gccgcctcgc acgcaggcca aggagcgctt ccgcacccac tactgccacg tcgtcgcgca
      661 gtggaacgga tgcgacccgt cgccgctgca gcccttcatc gacgtgctgg cggctcgagg
      721 tcgcgggccg tcgccgtgaa cggcgccacc gctggcaatc cgttccccgg gctccggccg
      781 ttcgaagcag aggaagacca tctcttcttc ggccgggaga cccgggtcga tgatctgctc
      841 cgccgcctgc gcttcaaccg ctttctggcg atcgtgggca cgtcgggctg cggcaagtca
      901 tccctcatcc gctgcgggct cgtgcccgcg ctccacggcg gccagatggt caaggcgggc
      961 tcgagctggc ggatcgccat catgcggccc ggcggccatc cgtttcgaga gctggccgcg
     1021 gccctcgccg ggcccgacgt gctcgacatg ccgccgagcc cgatgaacgt gccgggcgcg
     1081 gcgctggtgg aagtggccat gcggcgcggc gcccgcggtc tcgtggatgc ggtccggcag
     1141 gcgcggctgc caccatccga caacctcctc gtcgtcgtgg accagttcga ggagctgttc
     1201 cggtttcaaa agactcgtgg gtccgacggg cacggcgagg ccgtgttgtt cgtgaagctg
     1261 ctgctggaag ccagcgaaca ggccgacgtg ccggtgtacg tcgtcacgac gatgcggtcc
     1321 gacttcatcg gcgactgcat ggagtacccc ggcctgccag aggcgttgaa caacagccag
     1381 tacctggtgc cgagaatgac gcgtgacgag ctgcgcgcgg ccatcaccgg cccggtggcg
     1441 gtggccggcg caggcatcgc gccgcgtctc gtgcagcggc tgctgaacga catgggatcc
     1501 gatcaggacc agctgccggt gctgcagcat gcgctgatgc gtacgtggga ccactgggca
     1561 aaccgccccg agccgcgcgg accgatcgat ctcgacgact acgaaggggt cggcggtctc
     1621 aaggaggcgc tgtcgcgcca cgccgaggag gcgttcgcgg aagcgagccc cgggcgtcag
     1681 cagcacctcg tcgagcagat gtttcgcgcg ctcagcgaca tcgtcgacga tccgcgcggg
     1741 gggcgccgcc cgtgcgcggt cgccgagatc gccgccatcg ccgccgcatc cgaagccgag
     1801 gtggcgcagg ccgtcgagct gttccgccgt cccggccggt ccttcctgat gccaccggtc
     1861 ggcatcccgc tcacgtctgg gacgatcgtg gacctgtcgc acgaaagcct catgcgctgc
     1921 tggacgaggc ttcgagcatg ggttgaagaa gaacgggcgt cggctgcgat ctacctgcgg
     1981 ctgacgcgcg cggcccagtg gtacgacgac ggcacggccg ggctgtggcg ggaccccgaa
     2041 ctcgggctcg gcctcgagtg gcggctcgaa cggcacccga ccgaggcgtg gg
//
LOCUS       DASSYW010000028         3597 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_865057, whole genome shotgun sequence.
ACCESSION   DASSYW010000028 DASSYW010000000
VERSION     DASSYW010000028.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3597)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3597)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3597
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_865057"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..366)
                     /locus_tag="VFN38_00440"
     CDS             complement(<1..366)
                     /locus_tag="VFN38_00440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010242.1"
                     /translation="MRARRRMTVAGTLALGVAFLAWRAPTPAAAGGERDPARFLADAR
                     AATSRYDSLQHAIDDGFTRVGTEFPAMGEHWVSFARVLEDTLDARRPSVLIYANTVDG
                     PRLAGVAYSRLIGGRATPPA"
     gene            complement(372..797)
                     /locus_tag="VFN38_00445"
     CDS             complement(372..797)
                     /locus_tag="VFN38_00445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010243.1"
                     /translation="MKPLTDSLDRLRPCGAALVLLLAACWTSPKPQQVAMSDQQRGAS
                     VTLRMTDGVVHSAELLSVRDGGLVLLLGQRVAVAPLAGVASLTFAPAGSPMNAADAKT
                     LEHARGAARFPYGIPPAALTLLLRHAGQDAPIELHAGAP"
     gene            complement(794..2362)
                     /locus_tag="VFN38_00450"
     CDS             complement(794..2362)
                     /locus_tag="VFN38_00450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010244.1"
                     /translation="MLRSFLRPRRIHLLAIGSLVAGACIISSNTDTAAVSRSSLVGTV
                     VQTPFRAHLIDGDVIVFDQGARVDSAQVSGTGRRFDALRTTTVASTGIALDSVLGFEV
                     YERTPNPGRTLVYSAAATTVSVVGAAALAVAIFGSCPTIYADSAGVPTLQAESFSYSI
                     APLLAKRDVDRMTVVPNAEGVIRLAVRNEALETHHLDQMEIVEVRHAPGEVAYPSPRG
                     GAVVVAGPMTAASARDGAGRDVSRLVARRDDAAFSTDDGLLDRAIAGGPVEDQLTLAL
                     PRRAGADSMALVLRARSSLLTTSVLYEHLMGRQGALALDWMGRDLSRITSLAKLGAWY
                     GANFGMRVEVQDGDRWRQVIRLMDFGPTAWRDVGVVLPAATAIDDSVRVRLTFPADAF
                     RIDQAALAYHARRAEQRRIPIARATDSQGAGRPDLVAMLARADDREVETHPGDQFWIE
                     FDAGRAAPDARTFFFAGQGYYVEWLRPAWMKSAALTQPFSPARTSMRDLLRSWKGGRD
                     SLEAQFFSRRVPIT"
     gene            complement(2391..3491)
                     /locus_tag="VFN38_00455"
     CDS             complement(2391..3491)
                     /locus_tag="VFN38_00455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010245.1"
                     /translation="MRVLLLDEGFISGAVTGRGLARAGCSVDVLAATGGRGGCRVDGG
                     SWRLAPRVGDPRLLDVIDAAVRSSAYDIVYPVTEPLQWLLWDASPSWSAPIFPAVEEA
                     SRPARRDKRLMSELVARHGVSIPRQMAADSDDAVRDAIDGLGVPLVIKGCMGRGGDAT
                     RICATTASALSEARRLRARGRPPFAQTFVTGVTQLAGGLFAGGRMLRYYGGAKTAQFP
                     ARTGPAAELTSVDDSALFDCVSRVAVAAGLTGLASIDAVRDGAGRVHFLELNARPWGS
                     IEAAERAGLELFSGLVQLWQGRDVAPRFSFRSGARSPIFPLYLLSTPYWRAGLAPRAL
                     QRDWRRTAAMTRTRPTLGLHLLHRLLRVGMNW"
BASE COUNT          546 a         1291 c         1298 g          462 t
ORIGIN      
        1 agccggtggc gtggcgcggc cgccgatcag tcgcgagtac gccacaccgg ccaggcgcgg
       61 cccgtccact gtgtttgcgt agatcagcac ggaagggcgc cgcgcgtcga gggtgtcctc
      121 cagcacgcgc gcgaagctga cccagtgctc gcccatcgcg ggaaactcgg tgccgacgcg
      181 cgtgaagccg tcgtcgatcg cgtgctggag cgagtcgtac cgggaagtgg ccgcgcgcgc
      241 gtcggcgaga aatcgcgccg gatcgcgttc tccgccggcc gccgccggtg tgggcgcgcg
      301 ccacgccagg aacgccactc cgagcgcgag cgtgcccgcc accgtcatcc gtcgtcgcgc
      361 gcgcatcggc gtcatggcgc tcccgcgtgc agctcgatcg gggcgtcctg gccggcatgc
      421 cggagcagca gcgtgagggc ggccggcggg atgccgtacg gaaagcgggc cgcgccgcgc
      481 gcatgctcga gcgtcttcgc gtctgccgcg ttcatcggcg agccggccgg agcgaaggtc
      541 aggctcgcga cgcccgcgag cggcgcgacg gcgacccgct gtccgagcaa caggacgagc
      601 ccaccgtccc gcacggagag gagctccgcg gaatgcacga ccccgtcggt catgcgcagc
      661 gtgaccgaag cgccacgctg ttgatccgac atcgccacct gctgaggttt cggcgatgtc
      721 cagcacgccg cgagcaggag gacaagcgcc gcgccgcacg ggcgcaaccg gtcgagacta
      781 tcggtgagtg gcttcatgtg atcggcaccc gtcggctgaa gaactgcgct tcgagggaat
      841 cgcgaccccc cttccagctc cggagcaggt cgcgcatcga cgtcctggcg ggcgagaacg
      901 gttgcgtcag cgccgcgctc ttcatccatg cgggccggag ccactccacg tagtagccct
      961 gcccggcgaa gaagaaggtt cgcgcgtccg gggccgcgcg cccggcgtcg aactcgatcc
     1021 agaactggtc gccggggtgt gtctccacct cgcggtcgtc ggcgcgcgcg agcatcgcca
     1081 ccagatccgg ccggccggcg ccctgcgaat ccgtggcgcg cgcgatggga atccggcgct
     1141 gctcggcacg ccgtgcatga tacgcgagcg ccgcctggtc gatccggaag gcgtcggcgg
     1201 gaaaggtgag ccgcacccgc acgctgtcgt cgatcgctgt cgccgccggc aggacgacgc
     1261 ccacgtcgcg ccaggcggtc gggccgaaat ccatcaggcg aatgacctga cgccagcggt
     1321 caccgtcctg cacttcgacg cgcatgccga agttggcgcc gtaccacgcg cccagcttgg
     1381 cgagcgaggt gatgcgcgag aggtcgcggc ccatccagtc cagcgcgagc gcgccctggc
     1441 ggcccatcag gtgttcgtag agcaccgatg tcgtgaggag gctgctccgc gcgcgcagca
     1501 ccagcgccat gctgtccgcg cccgcacgcc ggggcagggc cagcgtcagc tggtcttcga
     1561 ccggtccgcc ggcaatcgcg cggtccagca ggccatcgtc ggtcgagaag gcggcgtcgt
     1621 cgcgccgcgc gacgagtcgg ctgacgtcgc ggcccgcgcc gtcgcgcgcc gaagcggccg
     1681 tcatcggccc ggcgacgacc accgcaccgc cccgcggcga aggatacgcg acttctcccg
     1741 gcgcatgacg gacctccacg atctccatct ggtcgaggtg atgcgtctcg agcgcctcgt
     1801 tgcgcacggc gaggcggatc acgccctcgg cgttgggaac caccgtcatc cggtcgacgt
     1861 cgcgcttcgc cagcaacggc gcgatgctgt aggagaacga ttcggcctgg agcgtgggga
     1921 ccccggcact gtcggcatag atcgtcgggc acgagccgaa gatcgcgacc gccagcgccg
     1981 cggccccgac gacggatacg gtggtggccg ccgcgctgta gacgagcgtg cgccccgggt
     2041 ttggcgtgcg ctcgtagacc tcgaacccca gcacgctgtc gagcgcgatg cccgtgctcg
     2101 ccacggtcgt ggtgcgcaat gcgtcgaagc ggcggccggt gccgctgacc tgcgcgctgt
     2161 ccacgcgcgc tccctgatcg aacacgatca cgtcgccgtc gatgagatgc gcgcggaacg
     2221 gggtctggac caccgtgccg accagtgagg accggctcac cgccgccgtg tcggtgttgg
     2281 acgagatgat gcacgcgccg gcgacgaggc tgccgatcgc gagcaggtgg atgcgccgtg
     2341 gacgcaggaa cgatcgcagc acgagccctc cggatgtggg tacgacgacc ctaccagttc
     2401 atgccgacac ggagcaatcg atgcagcaga tgcagcccga gcgtcggccg agtgcgtgtc
     2461 atcgcggccg ttcgccgcca gtcgcgctgg agcgcgcgcg gggcgaggcc ggcgcgccag
     2521 tacggcgtgg acaggaggta cagcgggaag atcggagacc gggcgccgct gcggaaggag
     2581 aagcgaggcg ccacgtcgcg tccctgccag agctgcacga gtcccgagaa cagctccagc
     2641 cccgcgcgct ccgccgcctc gatcgagccc catggtcgcg cgttgagctc cagaaagtgc
     2701 acgcgccccg cgccgtcccg cacggcgtcg atgctcgcga gtcctgtcag gcctgcggcg
     2761 accgcgacgc gcgagacgca gtcgaagagc gcggaatcgt cgaccgacgt cagctcggcc
     2821 gccggccccg tacgcgccgg gaactgtgcc gtcttggcac cgccgtagta ccgcagcatg
     2881 cgtccgccgg cgaagagccc gccggccagc tgcgtcacgc ccgtcacgaa cgtctgcgcg
     2941 aagggcggac gtccgcgggc gcgcagtcgt cgagcctccg agagcgcgga cgcggtggtc
     3001 gcgcagatgc gcgtcgcatc accgccgcgg cccatgcatc ccttgatcac cagcggcacc
     3061 ccgagcccgt cgatcgcgtc gcggaccgcg tcgtccgagt cggcggccat ctggcgggga
     3121 atggacacgc catgacgcgc cacgagctcg ctcatcagcc gcttgtcgcg gcgagcgggg
     3181 cgggacgcct cctcgaccgc cggaaagatc ggggcgctcc aggacggact tgcgtcccac
     3241 aggagccatt gcagcggctc ggtgaccgga tagacgatgt cgtaggccga gctgcgaacc
     3301 gccgcgtcga tgacgtcgag caggcgggga tcgccgacgc gcggcgcgag ccgccagctc
     3361 ccgccgtcga cgcgacagcc gccccgaccg cccgtcgcgg cgaggacgtc gaccgagcag
     3421 ccggcgcgcg cgaggccgcg ccccgtcacg gcgccgctga tgaatccttc gtcgagcagg
     3481 aggacgcgca tgcaccaccc ttcacgttgg cgttcggcgc ctaacgaggg gtgccgcgtg
     3541 tcgcggggtc aggacgccgt gacggtaacg cgcaggaccc ggccgattcg gctcact
//
LOCUS       DASSYW010000029         3058 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_422962, whole genome shotgun sequence.
ACCESSION   DASSYW010000029 DASSYW010000000
VERSION     DASSYW010000029.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3058)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3058)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3058
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_422962"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..928)
                     /locus_tag="VFN38_00460"
     CDS             complement(<1..928)
                     /locus_tag="VFN38_00460"
                     /inference="COORDINATES: protein motif:HMM:NF024799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000976 - transcription cis-regulatory
                     region binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HET9010246.1"
                     /translation="MSQPTVSLVLSRNPKARVAPETRARVLKAAEELGYRPNRLAQGL
                     VRRRSFALGIVVPGVGNPVNGAIISGAERVAAQAGYAVLLCETGEVDVGQHLRALADR
                     QIDGVIVAGISESELADANLGRLNVVLVNEASTAFSSVQDDSLKAGALAAEHLLGLGH
                     RSLAFIGPASTASTFRLRERGFAKALRDAGIAPASEHWLRADPTVTGGLAAMRTLLTL
                     PTRPTAVFCANDLIALGAHKACALGGVAIPGGMSILGCDDIDIGTLVTPELSTISTPK
                     RELGARAVRLLLRQLDGDGGGVPAIQTLPVKLM"
     gene            complement(1056..1550)
                     /locus_tag="VFN38_00465"
     CDS             complement(1056..1550)
                     /locus_tag="VFN38_00465"
                     /inference="COORDINATES: protein motif:HMM:NF015331.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HET9010247.1"
                     /translation="MADHLLRTTLHLAVPRARAFAFFGDVENLARITPPELAFRIRTP
                     LPLTLGEGSLIDYTIGLHGIPMRWRTRIVRWREHEEFVDEQLRGPYARWVHRHSFRDD
                     GVGGTIIEDEVRYRLPFAPIGELAHPLVRPQLERIFTYRLHAVPRLLGDESPRSALDV
                     IRFD"
     gene            complement(1653..2081)
                     /locus_tag="VFN38_00470"
     CDS             complement(1653..2081)
                     /locus_tag="VFN38_00470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010248.1"
                     /translation="MFHDLHSGGLGDGRRRERSEQSERPLADREVPLGPPRTSIADAV
                     HAWLDGEATESQARRGEAGREVDFWKRLDEDLAARRRLRTPAHLNAQIMNALPMHAPT
                     LITPWWRREFVVTPSSAIVVATTLVVMAAAATALVFRLPH"
     gene            complement(2081..2722)
                     /locus_tag="VFN38_00475"
     CDS             complement(2081..2722)
                     /locus_tag="VFN38_00475"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HET9010249.1"
                     /translation="MATRIEQSGGAGTLSRARNTRYSIVVRTTEPEQLVDQDDSDQRI
                     IQRVLAGNRDDFTMLITRYSDPLYRHALCMTGSPDVAEDILQLSFIKAYQHLAEVRGR
                     FDAWVFRIVANGCKDWLKNIRRSHLSYDEDDQPSGFATPEEELDRTELRSDLDMALSS
                     LPASLREAFVMKHVEGRSYEEMADLLGTTVGALKMRVHRAREALQALLEEKYA"
     gene            complement(2784..>3058)
                     /locus_tag="VFN38_00480"
     CDS             complement(2784..>3058)
                     /locus_tag="VFN38_00480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010250.1"
                     /translation="RARVSGEIAARVKTRPASFWLERLSREGVPSGIVRSVLEVLADG
                     EGSALTGMPPSVPGAIRRAPPRLGEHSARVRTQGWDAFADDGEGQR"
BASE COUNT          490 a         1042 c         1066 g          460 t
ORIGIN      
        1 ccatgagctt cacggggagg gtctggatgg ccggcacccc gccgccgtcg ccgtcgagct
       61 ggcggagcag cagcctcacg gcgcgcgcgc cgagctcgcg cttgggggtg ctgatggtgc
      121 tgagctccgg cgtgaccagc gtaccgatgt cgatgtcgtc gcagccgaga atggacatgc
      181 cgccgggaat cgcgaccccg ccgagtgcgc acgccttgtg tgcgccgagc gcgatcaggt
      241 cgttcgcgca gaagacggcg gttggtctgg tgggaagggt gagcagggtc cgcatcgccg
      301 cgaggccgcc ggtcaccgtg gggtcggcgc ggagccagtg ctcgctcgcc ggcgcgatgc
      361 cggcgtcgcg cagcgccttg gcgaatccgc gctcgcggag ccggaaagtg gaggccgtgg
      421 acgccggtcc gatgaacgcg agcgagcggt gtccgaggcc gaggaggtgc tccgccgcca
      481 gcgcgcccgc cttgagcgag tcgtcctgca ccgaggagaa cgcggtcgac gcctcgttga
      541 ccagcacgac gttgagccgg ccgaggttcg cgtccgcgag ctcggactcg ctgatgccgg
      601 cgacgatcac gccgtcgatc tggcgatccg cgagcgcccg gaggtgctgg ccgacgtcga
      661 cctctcctgt ttcgcagagg agcacggcat agcccgcctg ggcggcgacg cgttccgcgc
      721 cggagatgat ggcgccgttc acgggattgc cgacgccggg gacgacgatc ccgagcgcga
      781 aggagcggcg gcggacgagc ccctgcgcga gccggttggg gcgatagccc agctcctcgg
      841 cggccttcag cacccgtgcg cgcgtctccg gggcgacgcg cgccttcggg ttgcgggaca
      901 gcacgaggga gacggtcggc tgggacacgc cggccttcct ggcgacctcg agggcggtga
      961 ctctggatgt gctaatacgc attggcaggc ggccaatacg cattggcgag tccggtttgt
     1021 caatagccga cctcaatgcc tggggtcgga cgccctcaat cgaaccggat cacatccagc
     1081 gccgatcgcg gcgattcgtc gccgagcagc cggggcacgg cgtgcagccg atacgtgaag
     1141 atccgttcga gctgcgggcg caccagcggg tgcgcaagct cgccgatggg agcgaacggg
     1201 agccggtagc ggacctcgtc ctcgatgatg gtgcccccca cgccgtcgtc ccggaacgag
     1261 tgacggtgca cccagcgggc atacggaccg cgaagctgct cgtcgacgaa ctcctcgtgc
     1321 tcgcgccagc gcacgatgcg cgtgcgccac cgcatgggga tgccgtgcag cccgatcgtg
     1381 tagtcgatca gcgatccttc ccccagcgtg agcggaagcg gcgtgcggat gcggaacgcg
     1441 agctccggcg gcgtgatgcg cgcgagattc tcgacgtcgc cgaagaaggc gaaggcgcgc
     1501 gcccgcggca cggccaggtg cagcgtggtc cggagcagat gatcggccat gccgatcaat
     1561 ggcgcgtggg ggaggcgcgt tcccggccgc ccgaaacacg aacggccggc cccgcggagg
     1621 gccggccgtt tcgagagcgg acgctcgacg acttagtgcg ggagcctgaa cacgagcgcc
     1681 gtggccgccg ccgccatcac cacgagggtg gtggcgacga cgatcgcgct cgacggcgtg
     1741 accacgaact cgcgacgcca ccacggcgtg atgagcgtgg gcgcatgcat cggcagggcg
     1801 ttcatgatct gcgcgttcag gtgcgccggc gtgcgcagcc ggcggcgcgc ggccagatcc
     1861 tcgtcgagcc gcttccagaa gtccacctcg cggccagcct cgccacgacg cgcctggctc
     1921 tcggtcgctt caccgtccag ccatgcgtgc accgcgtcgg cgatcgacgt gcgcggcggc
     1981 cccaggggaa cttcacgatc ggcgagcgga cgctccgact gttccgagcg ctcgcgcctg
     2041 cggccgtccc ccaggccgcc ggaatgcagg tcatggaaca ttaggcgtat ttctcctcca
     2101 gtaaggcctg gagcgcttcg cgagcgcgat gcacgcgcat cttgagcgca ccgaccgttg
     2161 ttcccagcag gtctgccatc tcctcgtacg aacgcccctc cacgtgcttc atcacgaagg
     2221 cctctcgcag cgaggccggc agtgacgaga gcgccatgtc caggtcgctg cgcagctcgg
     2281 tccggtccag ctcttcttcc ggcgtcgcga agcccgaggg ctgatcatcc tcgtcgtagc
     2341 tgagatggga gcgacggata ttcttcagcc aatccttgca accgttcgcg acgatcctga
     2401 acacccaggc gtcgaatcgg cctcgtactt cagcaaggtg ttgatacgcc ttgatgaagg
     2461 acagttgcag gatgtcctct gcgacatccg ggcttcccgt catgcagagc gcgtgtcgat
     2521 acagcggatc actgtaccga gtgatcagca tggtaaagtc gtcgcggttg cccgcgagca
     2581 cgcgctggat gatgcgttga tcagagtcgt cctgatcaac gagctgttct ggctccgtcg
     2641 tcctcacgac gatagagtaa cgcgtattcc gcgcgcggga cagggtaccc gccccgccag
     2701 attgctcgat ccgggttgcc acgtccaaaa gacgagtcgt cgcgggcgcc agtaacagcc
     2761 gaaaaacacg cgaaaatcac tcgtcaccgc tgcccttctc cgtcgtcagc gaaggcgtcc
     2821 cacccctgcg tgcgcacccg cgcggaatgc tcgccaaggc gcggcggcgc gcggcggatc
     2881 gcccccggca cgctgggcgg catgcccgtg agcgcggacc cctcgccatc ggccagcacc
     2941 tcgagtacgg accggacgat tccgcttggc acaccttcgc gcgacagccg ctcgagccag
     3001 aaggacgccg gccgcgtctt cacccgcgca gcgatctccc ccgatacccg agcacgcg
//
LOCUS       DASSYW010000030         4476 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1528127, whole genome shotgun sequence.
ACCESSION   DASSYW010000030 DASSYW010000000
VERSION     DASSYW010000030.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4476)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4476)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4476
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1528127"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1199)
                     /locus_tag="VFN38_00485"
     CDS             complement(<1..1199)
                     /locus_tag="VFN38_00485"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HET9010251.1"
                     /translation="MSRITAAAVLALCLSVAGTAHAQQRRISGRVVEAGGSVPLASVS
                     ITLPGTNVGVVTGDNGTFTLLVPSGDVQLNARRIGYRRRSFVVRAGESDVRVDMERDP
                     YRLEAQIVTGAATTVARQNVANDVGLVTADQLARVPSASLENALAGKIAGAQVIANGG
                     APGGGNQIRMRGVTSVFGSADPLYVVDGVIISNDVIQPGTNALTSARRASSNASNQDN
                     GVNRIADLNPNDIETVEVLKGASASAIYGSKASNGVIIIKTKTGSAGAPVSNVTQRLG
                     TFALARKFNLRRFASLADAQAYAVAQGYAMTPAEVAANYASCNGFCDFEEQLFGEKPL
                     SYETALGVRGGTGATNYFVSGLTKYDGGIQKNTGYKKDAIRLNLTQLVGERLSLQVNN
                     NYIRTLTR"
     gene            complement(1477..1698)
                     /locus_tag="VFN38_00490"
     CDS             complement(1477..1698)
                     /locus_tag="VFN38_00490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010252.1"
                     /translation="MDGHYKVRQADVDDLETDPEGVDFIRDDVRLGGAVADIGAQAGQ
                     RAAHIHELVEENRENVDKLAGRDGAKRTR"
     gene            complement(1831..2433)
                     /gene="msrA"
                     /locus_tag="VFN38_00495"
     CDS             complement(1831..2433)
                     /gene="msrA"
                     /locus_tag="VFN38_00495"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: protein motif:HMM:NF013766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_function: GO:0033744 -
                     L-methionine:thioredoxin-disulfide S-oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HET9010253.1"
                     /translation="MSRIVLSALALLSLAAAPLDTVVFAGGCFWGVQAVFQHVKGVVQ
                     ATSGYSGGTTAAPDYEQVSTGRTGHAESVRVIYDPARVSYQQLLEVFFTVAHDPTELN
                     RQGPDVGTQYRSALFYTRDAQRQAAQAYIAQLERSGAVKHHVVTQVAPLRGFTVAEAH
                     HQDYATLHPGEAYIMYNDAPKIAALKQRFPQLWSDKLASH"
     gene            complement(2508..4103)
                     /locus_tag="VFN38_00500"
     CDS             complement(2508..4103)
                     /locus_tag="VFN38_00500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010254.1"
                     /translation="MNQRTIARVASLIPAGILGIAAFALVLEITDPPGPGLDPDALSY
                     LGAAESVVAHGTYRIPTAKWASADSTAPLEHFPPGFSTALALPVRFGMTPPQAARLVE
                     ALCAAVTVTVLVLLVSAATTPLAGILLAVALFATPAMYEVHVSVLSEPLFLACLTLVL
                     AAMTCAPDRPLRAGIPAALGALTRYAGMSCVGAVALWSLLQRAPLAMRMRRTVVAVLP
                     ALVLQGAWVLRTRHAAGPTAIRKFSVYTTGLGATLAQGARTLGAWLVPDPDAALEPLS
                     HHGLLAVAAAVVVLLAVGGGVRRAWMDRATATDDRQRPAVDPQRLLGASAVLLACYLA
                     LIFVSRLLADPGIPFDNRLLAPALLLVTTIVATALALWWRAAHMEIARIAVCGALLGW
                     LAASASVTAVADRYVRTWGSDFAGEQWRRSELLAWARTNGASVPLYSTWPAAVYFHLH
                     RPARQVPLMTDDARALAAFPDSLRVHGGRLLVFDVADPQHVAPATLLASPGLRVVARV
                     QDGVVLAASDLPARRPAAAPPSR"
     gene            4303..>4476
                     /locus_tag="VFN38_00505"
     CDS             4303..>4476
                     /locus_tag="VFN38_00505"
                     /inference="COORDINATES: protein motif:HMM:NF012381.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase domain-containing protein"
                     /protein_id="HET9010255.1"
                     /translation="MSLSLAELARLLPPPAPAAPGIPTGIAALDAALQGGGLPRGRLT
                     EIVGATGSGKTTLA"
BASE COUNT          649 a         1518 c         1652 g          657 t
ORIGIN      
        1 cgcgtcagcg tgcggatgta gttgttgttg acctgcagcg acagccgctc gccgacgagc
       61 tgcgtgaggt tcaggcggat ggcgtccttc ttgtagcccg tgttcttctg gatgccgccg
      121 tcgtacttcg tcagcccgga gacgaagtag ttcgtggcac cggtgccgcc acgcactccg
      181 agggcggtct cgtaggacag aggcttctcc ccgaagagct gctcctcgaa gtcgcagaag
      241 ccgttgcacg acgcgtagtt cgccgccacc tccgccggcg tcatcgcgta gccctgggcc
      301 acggcgtacg cctgcgcgtc ggcgagcgac gcgaagcggc gcaggttgaa ttttcgcgcg
      361 agggcgaagg tgccgagccg ctgggtgacg ttggagacgg gcgcgcccgc gctccccgtc
      421 ttcgtcttga tgatgatcac gccgttcgac gccttggagc cgtagatcgc cgacgccgac
      481 gcccccttca gcacctcgac cgtctcgatg tcgttggggt tgaggtccgc gatgcggttg
      541 acgccgttgt cctggttcga cgcgttcgac gaggcgcgcc gcgccgaggt gagcgcgttg
      601 gtgccgggct ggatgacgtc gttgctgatg atcacgccgt ccaccacgta gagcggatcg
      661 gccgaaccga acaccgacgt gacgccgcgc atgcggatct ggttgccgcc gcccggcgcg
      721 ccgccgttgg cgatgacctg cgcgccggcg atcttgccgg cgagggcgtt ctcgagcgag
      781 gccgagggca ctcgcgccag ctggtcggcc gtgacgaggc cgacgtcgtt ggcgacgttc
      841 tgccgcgcga ccgtcgtggc cgcgccggtc acgatctgcg cctcgagccg atagggatcg
      901 cgctccatgt cgacgcgcac gtccgattcg ccggcgcgca cgacgaacga gcgccggcga
      961 tagccgatgc ggcgcgcgtt gagctgcacg tcgccactcg gcaccagcag ggtgaaggtg
     1021 ccgttgtcgc cggtgacgac gccgacgttc gtgccgggca gggtgatgct cacgctggcg
     1081 agcggcacgc tgccgccggc ctcgacgacg cggcccgaga tgcgtcgctg ttgagcgtgt
     1141 gcggtgccgg cgacagacag gcacagggcc agcacggcgg ctgcggtgat gcgggacatg
     1201 tctcctccgt tcaggcgggg gatccgaacg cggcatgggg ggccgcgagg ggagactgcg
     1261 tgcatcctgc gcgcgagcgg cggcgctcgc gtcgcactac atgagcgggc ccggaggccg
     1321 gcgtcaagaa ctgcgcgccc cgcgacctcg cccgccgtca cctcggcgag ccgcgcgtca
     1381 tgcgcgcgag aacatcgagt tcatctgttt gtgcacggac gcgaaacggc ccgcgcatcg
     1441 catgacgcgc gggccgttcg tcagtgggcg cgaccgtcag cgcgttcgct tcgcgccgtc
     1501 gcgccccgcg agcttgtcga cgttctcgcg attctcctcg accagctcgt ggatatgggc
     1561 ggcgcgctgt cctgcctgcg cgccgatgtc cgcgaccgcg ccgcccaggc gcacgtcgtc
     1621 gcgaatgaaa tcgacaccct cgggatccgt ctccagatcg tcgacgtcgg cctgcctcac
     1681 cttgtagtgg ccgtccacgt cgcgtccgtt gtgcgtcttg ttgcgctcag acattcggca
     1741 tgctcccggg ttggttgtac acccgagaga agcaaggtcc gcaccgacca gacgtcgcgc
     1801 cgccatgcag ctcgcgggct cggccgtgca tcagtgcgat gcgagcttgt cgctccacag
     1861 ctgcgggaac cgctgcttga gcgccgcgat cttgggcgcg tcgttgtaca tgatgtacgc
     1921 ctcgccggga tgcagggtgg cgtagtcctg atgatgcgct tccgcgacag tgaagccgcg
     1981 caatggcgcc acctgcgtca cgacgtgatg cttcaccgcc ccgctccgct cgagctgcgc
     2041 gatgtacgcc tgcgccgcct gccgctgtgc gtcgcgcgtg tagaagagcg ccgagcggta
     2101 ctgggtgccc acgtcggggc cctggcgatt cagctcggtt gggtcgtgcg ccacggtgaa
     2161 gaagacctcg aggagctgct ggtacgacac gcgcgccgga tcgtagatca cgcgcaccga
     2221 ttcggcatga ccggtgcggc cggtgctcac ctgctcgtag tcgggcgcgg ccgtggtgcc
     2281 cccgctgtat cccgacgtcg cctgcaccac gcccttcacg tgctggaaga cggcctgcac
     2341 cccccagaag cacccgccgg cgaacacgac cgtgtcgagc ggcgcggcgg cgagggagag
     2401 gagtgcaagc gcgctgagca cgatgcggga catggatgac ctcgggcagt ggttgatgct
     2461 tcgcagcgcg aagcgctcgt gtagtactcg ccggccccgc attcggttca gcgtgacggc
     2521 ggggccgccg ccggacggcg cgccgggagg tcgctcgccg ccagcaccac gccatcctgc
     2581 acccgcgcca cgacgcgcag cccgggcgac gccaggagcg tggcgggcgc cacgtgctgg
     2641 ggatccgcca cgtcgaagac gagcagtcgt ccgccatgca cacggaggct gtcgggaaag
     2701 gcggccagcg cacgcgcgtc gtcggtcatc aacgggacct gtcgggcggg cctgtgcagg
     2761 tggaagtaca ccgccgcggg ccacgtcgaa tagaggggca ccgacgcgcc gttcgtgcgc
     2821 gcccacgcca gcagctcgct gcgccgccac tgctcgcccg cgaaatcgga gccccaggtt
     2881 cgtacgtacc gatccgcgac cgcggtgacc gacgcgctcg cggcgagcca gcccagcagg
     2941 gcgccgcaga cggcgatgcg cgcgatctcc atgtgtgcgg cgcgccacca gagcgcgagc
     3001 gccgtggcga cgatcgtcgt cacgagcagc agcgccggcg cgagcagccg gttgtcgaac
     3061 gggatgccgg gatcggcgag caaccgcgag acgaagatga gcgcgaggta gcaggccagc
     3121 agcacggcgc tcgcaccgag gagacgttgc ggatccacgg cgggacgctg gcgatcgtcc
     3181 gtcgccgtgg cccggtccat ccatgctcgg cgcacgccgc cgccgaccgc gagcagcacc
     3241 acgacggcgg cggccacggc gagcaggccg tgatgcgaca gcggctcgag ggccgcatcg
     3301 ggatcgggga cgagccacgc gccgagggtg cgcgcaccct gcgcgagcgt ggcgccgagc
     3361 cccgtggtgt agacggaaaa cttcctgatg gcggtggggc cggcggcgtg tcgcgtgcgc
     3421 agcacccacg cgccctgcag cacgagggcg gggagcacgg cgacgaccgt tcggcgcatg
     3481 cgcatggcga gcggggcgcg ctggaggagc gaccagaggg cgaccgcgcc cacgcacgac
     3541 atgccggcgt agcgggtgag ggcgccgagc gccgccggga ttcccgcgcg cagagggcgg
     3601 tccggcgcgc acgtcatggc ggcgagcacc agcgtgaggc acgcgaggaa gagcggctcg
     3661 ctgagcacgg agacgtgcac ctcgtacatc gccggcgtgg cgaacagcgc gacggcgagc
     3721 aggatgccgg cgagtggcgt cgtcgccgcg ctcacgagca gcacgagcac cgtcacggtg
     3781 acggcggcgc agagggcttc gacgagccgc gccgcctgcg ggggcgtcat cccgaagcgc
     3841 acggggaggg cgagggcggt ggagaagccg ggtggaaagt gctcgagggg ggccgtgctg
     3901 tcggcgctgg cccacttcgc ggtgggaatg cgatacgtgc cgtgcgcgac gaccgactcg
     3961 gcggcgccca ggtagctgag ggcatcgggg tcgaggccgg ggccgggcgg gtcggtgatc
     4021 tcgaggacga gcgcgaaggc ggcgatgccg aggataccgg ccggaatgag cgaggcaacc
     4081 cgcgctatcg tgcgttggtt catttgttta ccaagcggcg gtctcccggc tcgtcgacca
     4141 tgctcgctgc cgttcgggca gtggttgtag tttcgggatt cgttcggtaa ataccacctg
     4201 cgaactgaac cgcgcggtgc ccgtccaaga tagggccgcg gcacgccccc gatcttcggt
     4261 atttattcgg tacgggcatc atccctgctc ctgcttcccg tcatgtccct ctcgctcgcc
     4321 gagctcgcac gactcctccc tccgccggcg cccgctgcgc ccgggatccc caccgggatc
     4381 gcggcgctcg acgcggcgct ccaggggggt gggctcccgc gcgggcggtt gaccgagatc
     4441 gtcggcgcca cggggagcgg gaagacgacg ctcgcc
//
LOCUS       DASSYW010000031         3842 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1472927, whole genome shotgun sequence.
ACCESSION   DASSYW010000031 DASSYW010000000
VERSION     DASSYW010000031.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3842)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3842)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3842
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1472927"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(105..365)
                     /locus_tag="VFN38_00510"
     CDS             complement(105..365)
                     /locus_tag="VFN38_00510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010256.1"
                     /translation="MSWSVDASGHVFPANGGAADEEYPHVVVDRGGVEWAVREVETPQ
                     PWARGARCLVLNSRECVRRIWRYPSHWRKLDADALLRLGIAD"
     gene            complement(651..1406)
                     /locus_tag="VFN38_00515"
     CDS             complement(651..1406)
                     /locus_tag="VFN38_00515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010257.1"
                     /translation="MSCPPPDEPGGLPPGAADEPPDEPTETASDEAPVPRGPFTRDNP
                     LTFIVPEPLLLRIERVDRPGAAPGEQPVAFTRAGPREVLLAVNAYPSQLVDAFFASDA
                     FGEPVIVVGAAWEEEGGVRGELSTLLPERTMRAIQESVSPEEDDEEDREEPWAASASL
                     TGTSYEDVVGSDDDEDDEEDEEEGDEEEGDEDDEDAEPHFPLVIGAVLRFPENRKFPG
                     DFELEVDDLMRSILEGRAMDAGEKRIDNLLGGI"
     gene            complement(1468..3738)
                     /locus_tag="VFN38_00520"
     CDS             complement(1468..3738)
                     /locus_tag="VFN38_00520"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HET9010258.1"
                     /translation="MTTLDFQALFAHAADGMLVLDASLVVVEANEAFAALLGTTRDAL
                     VGRLAADFTEPQDPPFHSSPAEIAAWEGSASMVRRFRRADGSTLEGEVTVSRLPEDAI
                     CWVVRDVRRPGVVSALRASEALFRDVAESLNAGLVVTDLANRALYVNERMCEITGFPR
                     EELEGHELGPILFVPAEQDAHDERLRRRLAGMREQYEVRHRRRDGSSFLAGVSASPLH
                     DGAGRVVGTVGVVIDVTDRYEWEREMAVREHRYRLMFEMTPLPAWVYDTSTYRFLAVN
                     PAAIESYGYSEAQFLAMTILDIRPPEEVERVKRQVQARQNGLPVNGRDAGFRHRKADG
                     TDIDVEINSHAFDFEGHSARIVLVNDVTEERRLRRRELEIGQQLLQAQKMEAVGRLAG
                     GVAHDFNNLLSVVMSAAEVLSDELPAHSPLCEDVRNIRQAAERGAALTRQLLALGRKE
                     VHAPRPLDVHEVVMNVQRLLARALGGGVRLEIRREAAEARAIADASQLEQVLVNLAIN
                     ARDAMPGGGLLTISIGVRTLDPSAGEALELAAGDYVAIEVSDTGVGMDETTLSRAFEP
                     FYTTKGPLEGTGLGLSTVYGIVRQSGGAVTLASRPAEGTRVTVYLPKGTGASEMPVTA
                     GGERAIGAASPKLTGRVLLVEDEPQIRVQARRLLERCGFSVLEAVDGADGARVFGLER
                     TCIDVVVTDVVMPVLGGVELVSRVRAMAPKMPVVFVSGFAAEDRDLPLGARTAFVAKP
                     YTMASLRAAIEGVIAG"
BASE COUNT          533 a         1496 c         1262 g          551 t
ORIGIN      
        1 gtatgggtat ccatacaagg aaggtaacgc ctccggccgg cggtgggccg gacggatcct
       61 cgcgggtggc gggcgcgcgg cgacagcggc cgcgcgcggg cccgtcagtc ggcgatgccg
      121 agccggagca gagcgtcggc gtcgagcttg cgccagtgcg acggatagcg ccagatgcgc
      181 cgcacgcact cgcgggagtt cagcaccagg cagcgcgccc cgcgcgccca cggctgcggc
      241 gtctccacct cgcgcaccgc ccactccacc ccgccgcgat ccacgacgac gtgcgggtat
      301 tcctcgtcgg ccgccccccc gttcgcgggg aagacgtggc cactcgcatc gacactccag
      361 gacaccaggt cacctacggc tgtgctggtg aaagcggcgg cgcacccgtc agccgactcg
      421 cccagactac tcgcatgttt cacgattgga agcttcgtgc cgcgacggaa cgagcccgcc
      481 gaatacccaa cagacacgac cgcccggtga cggtcctctg tcaccgggca ggtgtatggg
      541 ctctgctcat gcgaagatgg cttcggcctg cccatctcca atacaacttc cgtgccgggt
      601 cgcggcctcg ctcgagcgcg cctcgcgcac acctcgcgcg cgcccgacga tcagatcccg
      661 ccgagcaggt tgtcgatgcg cttttcgccg gcgtccatcg cgcgtccctc gaggatcgag
      721 cgcatgaggt cgtccacctc cagctcgaag tcccccggga acttccggtt ctccgggaag
      781 cgcagcaccg cgccgatcac gagcgggaag tgcggctccg catcctcgtc gtcctcgtcg
      841 ccctcctcct cgtcgccctc ttcctcatcc tcctcgtcgt cctcgtcgtc atcgcttccg
      901 acgacgtcct cgtacgaggt cccggtgagc gaggcggagg ccgcccaggg ctcctcccgg
      961 tcctcctcgt cgtcctcctc cggcgacacg ctctcctgga tcgcgcgcat cgtgcgctcc
     1021 ggcagcagcg tcgagagctc gccgcggacg ccaccctcct cctcccaggc cgcgccgacg
     1081 acgatgaccg gctccccgaa ggcgtcgctg gcgaagaagg catccacgag ctgcgacggg
     1141 taggcgttca ccgcgagcag cacttcccgc ggcccggcgc gcgtgaacgc caccggctgc
     1201 tcccccggcg cggcgcccgg acggtccacc cgctcgatgc gcagcagcaa cggctccggc
     1261 acgatgaacg tgagcggatt gtcgcgcgtg aacggcccgc gcggcaccgg cgcctcgtcg
     1321 ctcgccgtct ccgtcggctc gtcaggcggc tcgtcggccg cacccggcgg cagcccgccc
     1381 ggctcgtctg gtggtggaca gctcatgccg gaaagttacc tcccccacgc cagctctgct
     1441 cgcgccggcg gtggagccag gtacggctca gcccgcgatc acgccttcga tcgccgcgcg
     1501 gagcgacgcc atcgtgtacg gcttggccac gaacgccgtg cgcgcgccca gcggaaggtc
     1561 gcgatcctcc gccgcgaagc ccgacacgaa caccaccggc atcttcggcg ccatggcgcg
     1621 cacgcggctc acgagctcca ccccgcccag caccggcatc acgacatcgg tgacgacgac
     1681 gtcgatgcag gtgcgctcca ggccgaacac gcgcgccccg tccgcgccgt ccaccgcctc
     1741 gagcacgctg aacccgcacc gctccagcag tcgtcgcgcc tgcacccgta tctgcggctc
     1801 gtcttccacc agcagcacgc ggccggtcag cttcgggctc gcggcgccga tcgcgcgttc
     1861 tcctcccgcg gtcaccggca tctcgctcgc gccggtcccc ttcggcaggt acacggtgac
     1921 gcgcgtcccc tcggcgggcc ggctcgcgag cgtcacggcg ccgcccgact ggcggacgat
     1981 cccgtacacg gtcgagagtc ccagcccggt cccctccagc ggacccttcg tcgtgtagaa
     2041 cggctcgaag gcgcgcgaca gcgtcgtctc gtccatcccg actcccgtat cgctcacctc
     2101 gatcgccacg tagtcgccgg ccgcgagctc cagcgcctcg cccgccgacg ggtccagcgt
     2161 gcgcacgccg atggagatcg tgagcagccc gccaccgggc atcgcgtcgc gcgcgttgat
     2221 cgccaggttc accagcacct gctcgagctg gctcgcgtcg gcgatcgcgc gtgcctcggc
     2281 cgcctcgcgc cggatctcca gccgaacccc gccgccgagc gcgcgcgcga gcaggcgctg
     2341 cacgttcatc accacctcgt gcacgtcgag cggccgcggg gcatgcacct ccttgcgccc
     2401 gagcgccagc agctgtcggg tgagcgccgc cccgcgctcg gccgcctgcc ggatgttgcg
     2461 cacgtcctcg cacagcgggc tgtgcgccgg cagctcgtcg gagagcactt cggcggcgct
     2521 catcacgacg ctgaggaggt tgttgaagtc gtgcgccacc ccgccggcca gccggcccac
     2581 cgcctccatc ttctgcgcct ggagcagctg ctggccgatc tcgagctcgc gccggcgcag
     2641 ccggcgctcc tcggtgacgt cgttcacgag gacgatccgc gccgagtggc cctcgaagtc
     2701 gaaggcgtgc gagttgatct cgacgtcgat gtcggtgcca tcggccttcc ggtgccggaa
     2761 tcctgcgtcg cgaccgttca ccggcagccc gttctggcgc gcctgaacct ggcgcttgac
     2821 gcgctcgacc tcctccggcg ggcggatgtc gaggatggtc atcgccagga actgtgcttc
     2881 cgagtatccg tagctctcga tcgccgccgg gttgacggcg aggaagcgat aggtgctggt
     2941 gtcgtagacc caggccggca ggggggtcat ctcgaacatc aggcgatagc gatgctcgcg
     3001 caccgccatc tcgcgctccc actcgtagcg gtcggtcacg tcgatcacga ccccgacggt
     3061 gcccaccacg cgccccgccc catcgtgcag cggagacgcc gacacccccg ccaggaacga
     3121 ggagccgtcg cgccgccgat gccgcacctc gtactgctcc cgcatccccg ccagccggcg
     3181 gcggaggcgc tcgtcgtgcg cgtcctgctc ggccggcacg aagagaatcg gcccgagctc
     3241 gtgcccctcg agctcctcgc gcgggaagcc ggtgatctcg cacatgcgct cgttcacgta
     3301 gagcgcgcgg ttcgcgaggt cggtgaccac gaggccggcg ttcaggctct ccgccacgtc
     3361 gcggaacagc gcctccgacg cgcggagggc gctcaccacg cctggtcggc gcacgtcgcg
     3421 caccacccag cagatggcgt cctccggcag ccgcgagacg gtgacctcgc cctccagcgt
     3481 actgccgtcg gcgcgccgga agcggcgcac catggacgcc gatccctccc acgccgcgat
     3541 ctccgccggc gacgagtgga atggcggatc ctggggctcc gtgaagtcgg cggccaggcg
     3601 gcccacgagc gcatcccgcg tcgtccccag caatgcggcg aacgcctcgt tcgcctcgac
     3661 gacgacgagc gacgcgtcga ggacgagcat gccgtcggcg gcatgcgcga agagcgcctg
     3721 gaagtcgagc gtcgtcatcg tcggctgggg cgtgccgcgg gaggcggcga ggagggagat
     3781 gctgtggaga gagtatcggc ctcgcgcacg gctccctgca gggccgcgtc gggcgccagg
     3841 cc
//
LOCUS       DASSYW010000032         3782 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1012100, whole genome shotgun sequence.
ACCESSION   DASSYW010000032 DASSYW010000000
VERSION     DASSYW010000032.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3782)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3782)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3782
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1012100"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..444
                     /locus_tag="VFN38_00525"
     CDS             <1..444
                     /locus_tag="VFN38_00525"
                     /inference="COORDINATES: protein motif:HMM:NF025605.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator
                     C-terminal domain-containing protein"
                     /protein_id="HET9010259.1"
                     /translation="VIAFIERGEEEVEALADPIQALDAWMTGYWAWLRSPVFPAMHRL
                     VNSEFHNFPDIAAFYAKEVIERAHRLVCGLLARAMDAGALRRMDPLVAARMLSALFVT
                     HALWYHQRTSMKSLAQTPVDVIFAQLRDFFLHAMRPDAPAVSSHA"
     gene            446..1825
                     /locus_tag="VFN38_00530"
     CDS             446..1825
                     /locus_tag="VFN38_00530"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HET9010260.1"
                     /translation="MNRLPLPRLLSLGLKITILVALIAFLARAASAQQVGTVATDSTI
                     RLTLGETVRLAARQNAGVESARYRAREAEARVTQRRADLLPNLSANASERRATLNSAA
                     AFPIELPMPGIDSRGTILGPLDVFDARARVTQSLYDPAARARVRSARTGVAAADADVG
                     QTADLAAATAANAYLSVLRADAVYRARLQDSTLAAELLSIARDQLSAGTGVALDVTRA
                     RSQLTSARSQLILARNDRDRTRIELARTLSLPLVNLVLVDSLSTLPLNVSTTEREALD
                     AAYRGRSDLQSITLQAEAARQQASAIRKEALPTVGVAADYGVSQRNGRSYLPTYDLGV
                     MLSLPIFDGFRREGRVEEQTQVARDLENRARDLRTQVEADVRVAVLNLASSAEAVGAA
                     RERLSLAEQEVAQSRERFQAGVSGNADVITASLTLNAARTQLVDALTAYQASRVALAR
                     AEGAISTLD"
     gene            1964..2986
                     /locus_tag="VFN38_00535"
     CDS             1964..2986
                     /locus_tag="VFN38_00535"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HET9010261.1"
                     /translation="MLALVGLGLVLGLGWGLKQWLYGRAHESTDNAQVDGHIVPVLAK
                     VSGYVTAVNVAENDRVRLDSTLVRIDEREYAVRLAQADADLAAARAASGGNGLPGQAQ
                     AAVQNATGQRAALDANIAAARANAVKADADLRRMRELVEKQVVSRQQLDAAQAAADAA
                     RAQLAAAQNSAGAAGAGITNAEAGVRLAQARLGAAQAARDNAALQLSYTRVTAPVAGI
                     VSRKQVEVGQLVQAGQPLLTVVSDTGVWVTANFKETQLHDLRVGQDVELDVDAYGGVS
                     AKGKVESVSAATGAKFALLPPDNATGNFTKVVQRVPVRIRVTEGLGKDRPLRPGMSVV
                     AHVATK"
     gene            3008..>3782
                     /locus_tag="VFN38_00540"
     CDS             3008..>3782
                     /locus_tag="VFN38_00540"
                     /inference="COORDINATES: protein motif:HMM:TIGR00711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HET9010262.1"
                     /translation="MTTLTLRRDGASGEAAGRSGPPAGAPVVAEDKYKYKYLIAIAVT
                     LAAVLELIDTSIVNVAIPHMMGNLGATIDEISWVSTGYIIANVIVIPLSSWLSGFFGR
                     KRYLTGSILLFVLASFFCGAATTLGGLVFWRVVQGLGGGALLSTAQATLFEAFPPKEV
                     GVGQAMFGVGVMVGPTIGPTLGGYIVDNYDWPWIFYINVPLGILAAFMVWTYVHDAEH
                     QERASTIDGTGILLLALCVGSLQWMLERGERYDWFESRFV"
BASE COUNT          546 a         1405 c         1283 g          548 t
ORIGIN      
        1 gtcatcgcct tcatcgaacg cggtgaggag gaagtcgagg ccctcgccga tcccatccag
       61 gcactcgacg cctggatgac gggttactgg gcgtggctcc gctcaccggt ctttcccgcc
      121 atgcaccggc tcgtgaattc cgagttccac aactttcccg acatcgctgc cttctacgcg
      181 aaggaagtca tcgagcgcgc gcatcggctg gtgtgcggcc tgctggcgcg ggccatggat
      241 gccggcgcgc tgcgccgcat ggatccgctc gtcgccgcgc gcatgctcag cgccctcttc
      301 gtcacgcacg cgctctggta ccaccagcgc acctccatga agtccctcgc ccagacgccg
      361 gtcgacgtca tcttcgccca gctgcgcgat ttctttcttc acgccatgcg gcccgatgcg
      421 ccggccgttt cctcgcacgc ctgacatgaa ccgcctgcca cttccgcgtc tgctttcgct
      481 cggactcaag atcaccatcc tcgttgcgct gatcgccttc ctcgcgcgtg ccgcctcggc
      541 gcagcaggtc ggcaccgtcg ccacggattc gaccatccgc ctcaccctcg gcgagaccgt
      601 gcgcctggcg gcgcggcaga acgccggggt ggagagcgcc cggtaccgtg cccgcgaggc
      661 ggaggcacgc gtcacgcagc ggcgcgccga tctgctgccg aacctgtcgg ccaacgcctc
      721 cgagcgtcgg gccacgctca acagcgccgc cgccttcccg atcgagctgc cgatgcccgg
      781 catcgactcg cgcggcacca tcctgggccc gctcgacgtc ttcgacgcgc gggcgcgggt
      841 cacgcagagc ctgtacgatc cggcggcgcg cgcccgcgtc cggagcgcgc gcaccggcgt
      901 cgccgcggcc gacgccgacg tcggccagac cgccgacctc gccgccgcca cggcggcgaa
      961 tgcgtacctc tcggtgctcc gcgccgacgc cgtctatcgt gcccggctcc aggactcgac
     1021 gctggccgcc gagttgctga gcatcgcccg agaccagctc tccgccggca ccggcgtcgc
     1081 gctggacgtg acgcgtgcgc gctcgcagct caccagcgca cgctcgcagc tcatccttgc
     1141 gcgcaacgac cgggatcgca cgcgcatcga gctcgcgcgc acgctctcgc tcccgctcgt
     1201 gaacctcgtc ctcgtggatt cgctctccac cctgccgctc aacgtgagca ccaccgaacg
     1261 cgaggcgctc gacgcggcct accgtggacg cagcgacctc cagtcgatca ccctgcaggc
     1321 ggaggcggcg cgccagcagg catcggcgat ccggaaggaa gcgcttccca cggtcggtgt
     1381 cgccgccgac tacggcgtga gccagcgcaa cggccgcagc tacctgccga cgtacgatct
     1441 cggcgtcatg ctgtcccttc ccatcttcga cgggttccgt cgtgagggac gcgtggaaga
     1501 gcagacccag gtggcgcgcg acctcgagaa ccgcgcccgc gacctgcgca cgcaggtcga
     1561 agcggacgtt cgcgtcgccg tcctcaacct cgcctcctcg gccgaagccg tgggtgccgc
     1621 gcgcgaacgc ctcagtctgg ccgagcagga agtcgcgcag tcgcgcgaac ggttccaggc
     1681 gggcgtgtcc ggcaacgcgg acgtgatcac cgcttcgctc acgctcaatg cggcgcgcac
     1741 gcagctcgtc gacgcgctca cggcctatca ggcgtcccgc gtcgcgctcg cgcgcgccga
     1801 gggcgccatc tccacactcg actgaccacc ccgtggcgcg catgcgccac tcactcgttc
     1861 gacgcaaatc gacatggcta ccgcgacgca acctcagact tccgtccctc gtgccaccgc
     1921 cgcgacaccg gcggcgccgg ccccgagcaa caagcgccgc gtcgtgctgg cgctcgtcgg
     1981 cctgggactc gtcctcggtc tcggctgggg actcaagcag tggctctacg gccgggcgca
     2041 cgagagcacc gacaacgcgc aggtggacgg ccacatcgtc cccgtgctcg ccaaggtgag
     2101 tggctacgtc accgccgtga acgtggcgga gaatgaccgc gtgcgcctcg actccacgct
     2161 ggtgcgcatc gacgagcgcg aatacgcggt gcgcctggcg caggccgacg cggacctcgc
     2221 cgccgcgcgc gcggcgtcgg ggggcaacgg gctgccgggg caggcgcagg cggcggtgca
     2281 gaacgccacc ggacagcgcg cggcgctgga cgcgaacatc gccgccgcgc gggccaacgc
     2341 cgtgaaggcg gacgccgacc tgcgccggat gcgtgagctc gtggagaagc aggtcgtctc
     2401 gcgccagcag ctcgacgccg cgcaggcggc ggcggacgcc gcccgcgcgc agctcgcggc
     2461 ggcacagaac agcgcgggcg cggcgggggc cggcatcacc aacgccgagg cgggggtgcg
     2521 cctggcgcag gccaggctcg gcgccgcgca ggcggcgcgc gacaacgcgg cgctccagct
     2581 ctcgtacacg cgcgtcaccg cgccggtggc cggcatcgtg tcgcgcaagc aggtggaggt
     2641 gggccagctg gtgcaggccg gccagccgct gctcaccgtc gtgtcggaca cgggggtgtg
     2701 ggtcacggcg aacttcaagg agacgcagct gcacgacctg cgcgtcggcc aggacgtgga
     2761 gctcgacgtc gacgcctacg gcggcgtgtc ggcgaagggg aaggtggaga gcgtgagcgc
     2821 ggcgacgggc gccaagttcg ccctcctgcc ccccgacaac gccaccggca acttcaccaa
     2881 ggtcgtgcag cgggtcccgg tgcgcatccg cgtcaccgag gggctgggca aggaccgccc
     2941 gctgcggccc ggcatgtcgg tcgtggcgca cgtcgccacg aagtagcacg caccggcgcg
     3001 gcactccatg accaccctga cactccggcg cgacggcgcg tccggcgagg cggccggccg
     3061 ttccggccca cccgccggcg cgcccgtcgt ggccgaggac aagtacaagt acaagtacct
     3121 catcgccatc gccgtgacgc tggcggccgt gctcgagctc atcgacacgt cgatcgtcaa
     3181 cgtcgcgatc ccacacatga tgggaaacct cggcgccacg atcgacgaga tctcgtgggt
     3241 gtccaccggc tacatcatcg ccaacgtgat cgtcatcccg ctctcgagct ggctgtcggg
     3301 gttcttcgga cgcaagcgct atctcaccgg gtccatcctg ctgttcgtgc tggcgtcgtt
     3361 cttctgcggc gcggccacca cgctgggcgg gctggtgttc tggcgcgtgg tgcaggggct
     3421 gggcggcggc gcactcctgt ccacggcgca ggccacgttg ttcgaggcct tcccgccgaa
     3481 ggaagtcggg gtggggcagg cgatgttcgg cgtgggggtg atggtaggcc ccacgatcgg
     3541 tccgacgctc ggcgggtaca tcgtcgacaa ctacgactgg ccctggatct tctacatcaa
     3601 cgtgccgctg ggcatcctcg cggcattcat ggtgtggacc tacgtccacg acgcggagca
     3661 tcaggagcgc gcctcgacga tcgacggcac cggaatcctg ctcctcgcac tctgcgtcgg
     3721 ctcgctgcag tggatgctgg agcgcggcga gcgctacgac tggttcgagt cgcggttcgt
     3781 ga
//
LOCUS       DASSYW010000033         2586 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1583349, whole genome shotgun sequence.
ACCESSION   DASSYW010000033 DASSYW010000000
VERSION     DASSYW010000033.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2586)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2586)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2586
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1583349"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1057
                     /gene="had"
                     /locus_tag="VFN38_00545"
     CDS             <1..1057
                     /gene="had"
                     /locus_tag="VFN38_00545"
                     /EC_number="1.1.1.368"
                     /inference="COORDINATES: protein motif:HMM:TIGR03201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_process: GO:0019439 - aromatic compound catabolic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="6-hydroxycyclohex-1-ene-1-carbonyl-CoA
                     dehydrogenase"
                     /protein_id="HET9010263.1"
                     /translation="MTAPGAPLARASFDATPGPGEVAVAVAGCGVCHTDLGYYYDGVR
                     TNAPLPLTLGHEIAGRVVAAGEGAEGWIGSAVIVPAVLPCGKCDLCERGLAPICRGQK
                     MPGNDIPGGFASHVVVPARGLCRVDERRLAAAGLTLAQVSVVADALTTPFQAVRRAGV
                     TPGSLAIVVGAGGVGGYCVQVAAAFGATVVAIDVDAAKLASIAAHGAALTLNAKEHDA
                     KGLKAAIAAFAKTHGLKPTEWFVFECSGTAAGQLTAWSLLVHGATLSVVGFTMDKVEV
                     RLSNLMAFDARALGNWGCPPDAYPGALDLVLDGKVALAPFVEMHPLDDINRVFDAVHH
                     RAIHRRAVLVPDAEVPA"
     gene            1054..2169
                     /gene="oah"
                     /locus_tag="VFN38_00550"
     CDS             1054..2169
                     /gene="oah"
                     /locus_tag="VFN38_00550"
                     /EC_number="3.7.1.21"
                     /inference="COORDINATES: protein motif:HMM:TIGR03200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018807 -
                     6-hydroxycyclohex-1-ene-1-carboxyl-CoA hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0019439 - aromatic compound catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-oxocyclohex-1-ene-1-carbonyl-CoA hydratase"
                     /protein_id="HET9010264.1"
                     /translation="MNAPEPFRPFKDHALTPEASHPGVRFERRNARTPDGKVADGLYN
                     AWITLDNPAQFNSYTTEMVKGVILAFRAASEMRDVSTVVFTGAGDKAFCTGGNTKEYA
                     EYYAGHPQEYRQYMRLFNDMVSAILACDKPVICRVNGMRIGGGQEIGMACDFSVAQDL
                     ARFGQAGPKHGSAPIGGATDFLPVIVGAERAMAACVLCEPFSAHKAYWMGVLTDIVPA
                     LRVDGQYVANPLVETERVTDAYGRLAFGEPKTGEALAAGKALMARGTVDLSLLDAKVE
                     ELCAKILLTFPDCTTKTLEELRKPKLDAWNRNKEISRSWLALNMMTEGRAGFRAFNEG
                     TKASREVDFVALRQALARGQAWSESFTDTLMPASRQG"
     gene            2174..>2586
                     /locus_tag="VFN38_00555"
     CDS             2174..>2586
                     /locus_tag="VFN38_00555"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HET9010265.1"
                     /translation="MSAAPLVTGLERDGALLRLTLARPKANIIDAAMIAALRDALARH
                     AASRTLRGAILDAQGPHFSFGASVEEHLPASCGPMLAGLHALVMAMLEFPAPILVAVR
                     GQCLGGALEVAMAASQIFAAQDAQFGQPEMKLGVFA"
BASE COUNT          365 a          943 c          923 g          355 t
ORIGIN      
        1 catgaccgcc ccgggggcgc cgctcgcgcg ggcgtccttc gacgcgacgc cgggcccggg
       61 cgaggtcgcg gtggccgtcg ccggctgcgg cgtctgccac accgacctcg gctactacta
      121 cgacggcgtg cgcaccaacg ccccgctccc gctcacgctg ggccacgaga tcgccgggcg
      181 cgtcgtcgcg gcgggagaag gcgccgaggg ctggatcggc agcgcggtga tcgtcccggc
      241 cgtgctgccg tgcggcaagt gcgatctctg cgagcgcggg ctcgcgccga tctgccgcgg
      301 ccagaagatg ccgggcaacg acatcccggg cggattcgcg tcccacgtcg tggtgccggc
      361 gcgcgggctg tgccgcgtcg acgagcgcag gctcgccgcg gccgggctca cgctcgccca
      421 ggtctcggtc gtcgccgatg cgttgacgac ccccttccag gcggtgcgcc gcgccggcgt
      481 gacgccgggc agcctcgcga tcgtcgtcgg cgccggcggc gtcggcggct actgcgtcca
      541 ggtggcggcg gcgttcggcg cgacggtggt cgccatcgac gtcgacgccg cgaagctcgc
      601 ctcgatcgcc gcccacggcg cggcgctcac gctcaacgcg aaggagcacg acgcgaaggg
      661 cctgaaggcc gcgatcgcgg cgttcgcgaa gacgcacggc ctcaagccca ccgagtggtt
      721 cgtcttcgag tgctccggca cggcggccgg gcagctcacc gcctggagcc tgctcgtgca
      781 cggcgcgacg ctgtcggtgg tcggcttcac gatggacaag gtcgaggtgc ggctgtcgaa
      841 cctgatggcg ttcgatgcgc gagcgctcgg caactggggc tgcccgccgg acgcctaccc
      901 gggcgcgctc gacctcgtcc tcgacggcaa ggtcgcgctc gcgccgttcg tcgagatgca
      961 cccgctcgac gacatcaacc gcgtgttcga cgccgttcac caccgcgcga tccaccgtcg
     1021 cgccgtcctc gtccccgatg ccgaggttcc cgcatgaacg ctcccgagcc cttccgcccg
     1081 ttcaaggacc acgcgctcac gcccgaggcc tcgcaccccg gcgtgcgctt cgagcgccgc
     1141 aacgcccgca cgccggacgg caaggtggcc gacggcctct acaacgcctg gatcacgctc
     1201 gacaacccgg cgcagttcaa ctcgtacacg accgagatgg tcaagggcgt gatcctcgcg
     1261 ttccgcgccg cgtccgagat gcgcgatgtg agcacggtcg tgttcaccgg ggcgggcgac
     1321 aaggcgttct gcaccggcgg caacaccaag gaatacgccg agtactacgc ggggcacccg
     1381 caggagtacc gacagtacat gcggctgttc aacgacatgg tcagcgcgat cctcgcgtgc
     1441 gacaagccgg tgatctgccg cgtcaacggc atgcgcatcg gcggtggcca ggagatcggc
     1501 atggcgtgcg atttctcggt cgcgcaggac ctcgcgcgct tcggccaggc cggcccgaag
     1561 cacggctccg ccccgatcgg cggcgccacc gacttcctgc cggtgatcgt cggcgccgag
     1621 cgggcgatgg cggcctgcgt gctctgcgag ccattctcgg cgcacaaggc ctactggatg
     1681 ggcgtgctca cggacatcgt gccggcactg cgcgtcgacg gccagtacgt cgccaacccg
     1741 ctggtcgaga ccgagcgcgt gacggacgcc tacggccgcc tcgcgttcgg cgagccgaag
     1801 accggcgagg cgctcgcggc gggcaaggcg ctgatggcgc gcggcacggt cgacctgtcg
     1861 ctgctcgacg cgaaggtcga ggagctttgc gcgaagattc tgctgacgtt ccccgactgc
     1921 acgaccaaga cgctcgagga gctgcgcaag ccgaagctcg acgcgtggaa ccgcaacaag
     1981 gagatctcgc ggtcctggct ggcgctcaac atgatgaccg aggggcgcgc gggcttccgc
     2041 gcgttcaacg aaggcaccaa ggcgtcgcgc gaggtcgact tcgtcgcgct gcgccaggcg
     2101 ctcgcgcgcg ggcaggcgtg gagcgaatcg ttcaccgaca cgctgatgcc ggcgagccgg
     2161 caaggctgac gccatgtccg cggcaccgct ggtcaccggg ctcgagcgcg acggcgcgct
     2221 cctgcgcctg acgctcgcgc gcccgaaggc caacatcatc gacgccgcga tgatcgccgc
     2281 gctgcgcgac gcgctcgcgc gccacgcggc gagccggacg ctgcgcggcg cgatcctcga
     2341 cgcccagggg ccgcatttca gcttcggcgc gagcgtcgag gagcacctgc cggcgagctg
     2401 cggcccgatg ctcgcgggac tgcacgcgct ggtcatggcg atgctcgagt tcccggcgcc
     2461 gatcctcgtc gccgtccgcg gccaatgcct cggcggtgcg ctcgaggtcg cgatggccgc
     2521 aagccagatc ttcgccgcgc aggacgcgca gttcggccag cccgagatga agctcggcgt
     2581 gttcgc
//
LOCUS       DASSYW010000034         2711 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_275284, whole genome shotgun sequence.
ACCESSION   DASSYW010000034 DASSYW010000000
VERSION     DASSYW010000034.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2711)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2711)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2711
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_275284"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..620)
                     /locus_tag="VFN38_00560"
     CDS             complement(<1..620)
                     /locus_tag="VFN38_00560"
                     /inference="COORDINATES: protein motif:HMM:NF012361.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HET9010266.1"
                     /translation="MTAVGSEPRFRLLPSDGGANALEEEVLATWRAENLFARTLETHA
                     GAPSWVFFEGPPTANGRPGIHHVFARTIKDLFCRHRAMKGYRVLRKAGWDTHGLPVEI
                     EVEKQLPALLRQRGMTDEEIARYSGKQLIEAFGVEEFNRLCRESVWRYQGDWEKLSER
                     IGYWLDYDHAYITYANPYVESVWWALATLHDKGLLTRGHKILPYCPR"
     gene            complement(617..1483)
                     /locus_tag="VFN38_00565"
     CDS             complement(617..1483)
                     /locus_tag="VFN38_00565"
                     /EC_number="2.4.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004731 - purine-nucleoside phosphorylase
                     activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HET9010267.1"
                     /translation="MDAGTIVNDRPATTGVAHTLEQVERAADVVRSRFATMADVAIVL
                     GTGLGGLASHMAVQATIEYADIPGFPLSTVESHAGRQLCGTLAGKTIIAMQGRFHRYE
                     GYTLSQVTFPVRVLRALGARTLVVSNACGGMHPLWATGDLMLIADHINLLGDNPLIGP
                     NDDRLGPRFPDMSEPYDGALRTIARAVAVEHAITLREGVYVAVPGPNLETRAEYRFLR
                     GLGADVVGMSTVPEVIVAIHAGMRVLGVSIITDLCLPDALEPASVETIIAVASRAEPN
                     LTTLVHGVLERL"
     gene            complement(1491..2066)
                     /locus_tag="VFN38_00570"
     CDS             complement(1491..2066)
                     /locus_tag="VFN38_00570"
                     /inference="COORDINATES: protein motif:HMM:NF016959.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DivIVA domain-containing protein"
                     /protein_id="HET9010268.1"
                     /translation="MSDEAFHLTAVDIRRYDFGSALRGYDKARVDQFRDQVAAEVERL
                     VRANQELETKSKGLVEQLRAFRERDKALNDALVSAQQLRAEIREQADREAQLLMREAR
                     AQSERDLESIRAEARRLEDELQTLVRARRSYLSQLRAMVERQLVEIETAEASTPQAAP
                     PEQSAPQTPKRDEPKQSAHPTPAWLDSLVKE"
     gene            2174..>2711
                     /locus_tag="VFN38_00575"
     CDS             2174..>2711
                     /locus_tag="VFN38_00575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010269.1"
                     /translation="MPEGDEPIPNLAGTAERGSERTLIRVQWRHRHHAFDTQTTQFQP
                     SFPFGRRLGGRQPAFRSLAGDVHLHQTSHVASAILAHPRDRVGEPGAVDRMHEVEPLD
                     RLRLVPLQMADEVPSNRHIDLSHLGQRFLHPVFADVRDTEIPRRSDGVGSVRLGDRDD
                     RHWLAMTTASDRRRYPLPH"
BASE COUNT          414 a          977 c          864 g          456 t
ORIGIN      
        1 cgcgggcaat agggcaggat cttgtggcca cgcgtgagca gtcccttgtc gtgcagcgtc
       61 gcgagcgccc accacacgct ctccacatac ggattcgcgt acgtgatgta ggcgtggtcg
      121 tagtcgagcc agtagccgat ccgctcgctc agcttttccc agtcgccctg gtagcgccac
      181 acgctctcgc gacacaggcg gttgaactcc tcgacgccga atgcttcgat cagctgcttg
      241 ccgctgtagc gcgcgatctc ctcgtcggtc atgccgcgct ggcggagcag cgccggcaac
      301 tgcttctcca cctcgatctc gacgggcaaa ccatgcgtgt cccaccccgc tttccgcagc
      361 acgcgatacc ctttcatggc gcggtgccgg cagaagaggt ccttgatcgt ccgcgcgaag
      421 acgtgatgga tgccgggtcg tccgttggcg gtcgggggcc cctcgaagaa cacccacgac
      481 ggcgcaccgg cgtgcgtctc gagcgtgcgc gcgaacaggt tctcggcgcg ccacgtcgcg
      541 aggacttctt cctcgagcgc gttcgcaccg ccatcggacg gcagcaggcg gaagcgcggc
      601 tcggacccga ccgccgtcac agccgctcca ggacgccgtg gacgagcgtc gtgaggttcg
      661 gctccgcgcg cgatgccacg gcgatgatcg tctcgacact cgcgggctcc aacgcgtcag
      721 gcagacacag gtccgtgatg atcgagacgc ctaacacgcg catgccggca tggatcgcga
      781 cgatcacctc gggaaccgtg gacatcccga cgacgtcggc tcccagaccg cggaggaacc
      841 ggtactcggc gcgggtctcg aggttcgggc cggggacggc gacgtacacg ccctcccgga
      901 gcgtgatggc gtgctccacc gccaccgcgc gcgcgatggt cctgagggcg ccgtcgtacg
      961 gctcggacat gtccgggaac cgtggcccga gccggtcgtc gttaggcccg atgagcgggt
     1021 tgtcaccgag caggttgatg tggtccgcaa tcagcatcag gtcgccggtc gcccacagcg
     1081 gatgcatccc gccgcacgcg ttggagacca cgagtgtccg cgcgcctaac gcgcggagca
     1141 cgcgcaccgg gaaagtcacc tgcgagagcg tgtagccctc gtaccggtga aaccggccct
     1201 gcatcgcgat gatggtcttc ccggcgagcg ttccgcacag ctggcggccc gcgtgcgact
     1261 ccacggtcga cagcgggaac ccgggaatgt ccgcgtactc gatcgtcgcc tggaccgcca
     1321 tgtgcgaggc cagtccaccg agcccggtac cgaggacgat cgcgacgtcg gccatggtcg
     1381 cgaaacgcga tcgcacgacg tcggccgccc gctccacctg ctcgagcgtg tgcgccacgc
     1441 cggtcgtcgc cggacgatcg ttcacaatgg ttccggcgtc cacgcgccag ctattccttc
     1501 accagcgaat cgagccaggc gggcgtcggg tgggcggact gcttaggctc gtcgcgcttc
     1561 ggcgtctgcg gcgccgactg ttcgggcggc gccgcctgcg gtgtcgatgc ttccgccgtc
     1621 tcgatctcca cgagctggcg ctcgaccatt gcgcgaagct gcgacagata cgaccggcgc
     1681 gcgcggacga gcgtctggag ctcgtcctcg agacggcgcg cctcggcgcg gatcgactcg
     1741 aggtcacgct cggactgcgc gcgtgcctca cgcatgagca gttgcgcctc gcggtccgcc
     1801 tgctcgcgga tctcggccct gagctgctgg gcggagacga gtgcgtcgtt caacgccttg
     1861 tcgcgttcgc ggaatgcgcg cagctgctcg accagcccct tggacttcgt ctcgagctcc
     1921 tggttggcgc gaacgagacg ctcgacctcc gcggcgacct gatccctgaa ctggtcgacc
     1981 cgcgccttgt cgtacccacg gagcgcgctg ccgaaatcgt agcgacggat atcgaccgcc
     2041 gtgagatgga aggcttcgtc gctcatgcgt gtcgcgcccc gaacaggaca gttccgagtc
     2101 tcaccatcgt ggccccttct tccaccgcga tctcgtagtc gttcgacatt cccatcgaga
     2161 gctccttggc cggatgcccg agggcgatga gccgatcccg aatctcgcgg gcaccgccga
     2221 acgtggctcg gagcgtacgc tcatccgcgt ccagtggcgc catcgtcatc acgccttcga
     2281 cacgcaaacc acgcagttcc aaccatcgtt ccccttcggc cggcgcctcg gcgggcgaca
     2341 gcccgccttt cgctccctcg ccggagacgt tcacctgcat cagacatcgc acgtcgcttc
     2401 cgcgatcctc gcccaccctc gcgaccgcgt cggcgagcct ggcgctgtcg accgaatgca
     2461 cgaggtggaa cctctcgacc gccttcgcct tgttccgctg cagatggccg atgaggtgcc
     2521 atcgaaccgg cacatcgacc tctcccatct tggacagcgc ttcctgcacc ctgttttcgc
     2581 cgacgtccgc gacaccgaga tcccacgccg ctcggacggc gtcggctccg tacgtcttgg
     2641 tgaccgcgac gatcgtcact ggctggccat gaccaccgcg agcgaccgcc gacgctatcc
     2701 gctgccgcac c
//
LOCUS       DASSYW010000035         2019 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_201795, whole genome shotgun sequence.
ACCESSION   DASSYW010000035 DASSYW010000000
VERSION     DASSYW010000035.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2019)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2019)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2019
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_201795"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1015)
                     /locus_tag="VFN38_00580"
     CDS             complement(<1..1015)
                     /locus_tag="VFN38_00580"
                     /inference="COORDINATES: protein motif:HMM:NF024245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HET9010270.1"
                     /translation="MNGRPGGRGGLAVTALCAFLVLPAVWTGVRAQAEPTPQSPPTAA
                     AASAREARLDLNRATLQELESLPIPKEVAHDIYEHRVYRGYFTSIYDLMQIESMTPEI
                     LRTLSALVVTMPPPEKPDWVQRYEDSFRQVQNFLSQEGAREELADEYFDQLRDPVNVN
                     RLDFFQLVGYQNVSPVDAVAIVRGRKSAGRIENDRQLRAVDGLSYWGFRNLRDYVVYD
                     DPQERHEVHGDLQFVTFNTPYLLDDQDILLEYIPTEGKPAVAQDFESTTGWGIRRLDT
                     ASPAVLSKLRLRLGRAWKAGIMTFRDVGEEEFDETIKGYAHWENLRSQRRVRLDKLVV
                     CNFR"
     gene            complement(1012..1929)
                     /locus_tag="VFN38_00585"
     CDS             complement(1012..1929)
                     /locus_tag="VFN38_00585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010271.1"
                     /translation="MTTRGALFGAFVLVALARPAAALFEDLPPSARALGMGTALTSFA
                     DDAWAAYYNPAMLPRLPFFEGGVSTAQPNGVAFNRLTTIAVASPLRGRVGGLAFGWRH
                     FGVENGDADLLTENTLSLSHGFKLFGDASTSASFGWTLNFYQADFANSVGPSGNGSGG
                     LVPGNAWAVGVDIAAVVTVFERTYVGFTTRNLNAPTIGDDAEELRRQVTLGISYRPYP
                     GVTTAFDVTDGLGEEFRILGGLEFEVVPQLQVRFGLGTEPTKVHGGFSVHVSKVSFDY
                     GFGTGGGVLDATHQFGIRTRLDLLGEGSP"
BASE COUNT          321 a          684 c          699 g          315 t
ORIGIN      
        1 cgcggaagtt gcagaccacg agcttgtcga gccggacgcg gcgctggctg cgcaggttct
       61 cccagtgcgc gtagcctttg atcgtctcgt cgaactcctc ctcgccgacg tcgcggaagg
      121 tcatgatgcc cgccttccac gcgcgtccga ggcgcaggcg cagcttcgac agcaccgccg
      181 ggctcgccgt atcgagcctg cggatgcccc agccggtggt ggactcgaag tcctgggcca
      241 cggccggctt gccctcggtc gggatgtact cgagcaggat gtcctgatcg tcgagcaggt
      301 acggcgtgtt gaaggtgacg aactgcaggt cgccgtggac ctcgtggcgt tcctgcggat
      361 cgtcgtagac cacgtagtcg cgcagattcc ggaagcccca gtagctcaag ccgtcgacgg
      421 cgcgcagctg gcggtcgttc tcgatgcgcc cggcgctctt gcgcccgcgc acgatggcga
      481 cggcgtcgac cggcgacacg ttctgatacc ccaccaattg gaagaagtcg agccggttca
      541 cgttcaccgg gtcgcgcagc tggtcgaagt actcgtcggc cagttcctcg cgcgcccctt
      601 cctgactcag gaagttctgc acctgccgga agctgtcctc gtaacgttgc acccagtccg
      661 gcttttccgg cggcggcatg gtgacgacga gcgccgacag cgtgcgcagg atctccggcg
      721 tcatgctctc gatctgcatg agatcgtaga tcgacgtgaa gtagccgcgg tagacgcggt
      781 gctcgtagat gtcgtgcgcc acctctttgg ggatgggcag cgactcgagc tcttgcagcg
      841 tggcgcggtt gaggtcgagc cgcgcctcgc gtgcgctcgc ggctgcagcc gtcggcgggc
      901 tctggggtgt cggctcggct tgcgcgcgca ctccggtcca aacggcgggg aggacgagaa
      961 atgcgcagag cgcggtgacg gccaggccgc cccgcccgcc gggccgcccg ttcacggcga
     1021 accctccccg agcaggtcga gccgggtgcg gatgccgaac tggtgcgtgg cgtcgagcac
     1081 accgccgccg gtgccgaagc cgtagtcgaa gctcaccttc gacacgtgca cggagaagcc
     1141 gccgtggacc ttggtgggct cggtgcccaa gccgaagcgc acctgcagct gcggcacgac
     1201 ctcgaactcg agaccgccga ggatgcggaa ctcctcgccg aggccatcgg tgacgtcgaa
     1261 ggcggtggtg acgccgggat agggacgata cgagatcccg agcgtcacct ggcggcgcag
     1321 ctcttcggca tcgtcgccga tggtcggcgc gttcagattg cgcgtcgtga agccgacgta
     1381 cgtgcgctcg aacaccgtca ccacggcggc gatgtccact cccaccgccc aggcgttccc
     1441 cggcaccagg ccgccggacc cattgccgct cgggccgacg ctgttggcga aatcggcctg
     1501 atagaagttg agcgtccagc cgaaggacgc cgacgtgctg gcgtcgccga agagcttgaa
     1561 gccgtgcgac agcgacaacg tgttctcggt gagcaggtcc gcgtcgccgt tctcgacgcc
     1621 gaagtggcgc cagccgaaag cgaggccgcc gacgcgaccg cgcagcggtg atgccaccgc
     1681 gatcgtcgtc aaacggttga aggcgacgcc gttgggctgc gccgtggaca cgccgccctc
     1741 gaagaacggc aaccgcggca gcatcgccgg gttgtaatag gcggcccagg catcgtcggc
     1801 aaaggacgtg agcgccgtcc ccatgccgag ggcgcgggcg ctgggcggca gatcctcgaa
     1861 cagtgccgcc gccgggcgcg cgagcgcgac gagaacgaag gcgccgaaca atgcgccccg
     1921 tgtcgtcatc gccggacgtc gtcgcacacc gctcccccct aacgattgag ccgcgtggcg
     1981 accaccacgg gcatctgctt cgtttcgcgg ccgcccgac
//
LOCUS       DASSYW010000036         2039 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1657274, whole genome shotgun sequence.
ACCESSION   DASSYW010000036 DASSYW010000000
VERSION     DASSYW010000036.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2039)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2039)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2039
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1657274"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..248)
                     /locus_tag="VFN38_00590"
     CDS             complement(<1..248)
                     /locus_tag="VFN38_00590"
                     /inference="COORDINATES: protein motif:HMM:NF014898.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HET9010272.1"
                     /translation="MTIPAVREQIDRDFWLEGFRDFLALEAGHSANTVEAYLRDLRRM
                     GEFALSRGVRDPARVGRPLLRDFVYLLKDLGLSAATIRR"
     gene            complement(245..1258)
                     /locus_tag="VFN38_00595"
     CDS             complement(245..1258)
                     /locus_tag="VFN38_00595"
                     /inference="COORDINATES: protein motif:HMM:NF020893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerB family tellurite resistance protein"
                     /protein_id="HET9010273.1"
                     /translation="MLALLAAIENVVPPVPSDAAVALGAFLSHRGVTTPILVFVVTWT
                     ANMVGAALVYLGARRFGHRLFATRTGRRLLAPRSLAVIEREYLRFGVAGIFLSRFLPG
                     IRAVVPPFAGLVRLGPVRTFVPMALASMIWYGGITLMGTVLGTQWQRILTILEDVNRT
                     MGIIAAALIVVGVAWYLLARRRRGGERLWHATRDALDPAAPSFLRGTDIAEGSAREAA
                     ALLVLELAYADPVLTPADRDLVAGHLRDRWGLAAGRPLLEPPPEDERRTRFAAYADRL
                     RQRFGRAQRLELVERMWSVAFGDGAIGAQEARVMTVAAELLGLTPAEVAEVRRRVRGT
                     DPP"
     gene            complement(1312..1785)
                     /gene="ispF"
                     /locus_tag="VFN38_00600"
     CDS             complement(1312..1785)
                     /gene="ispF"
                     /locus_tag="VFN38_00600"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008685 - 2-C-methyl-D-erythritol
                     2,4-cyclodiphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="HET9010274.1"
                     /translation="MRVGIGYDSHRFTDSRPLKLGGVRIPGARGLQGHSDADAVAHAL
                     TDAILGAAAAGNIGQLFPDSDPQWKDADSMELLRTAHELVRGRGHSLVQADLTVITES
                     PRLGPHLQAMAASLAGKLGLSASAISVKAKTNEGMGFIGKGEGLAVIAVAVLEAR"
     gene            complement(1904..>2039)
                     /locus_tag="VFN38_00605"
     CDS             complement(1904..>2039)
                     /locus_tag="VFN38_00605"
                     /inference="COORDINATES: protein motif:HMM:NF039584.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010275.1"
                     /translation="NVVSAAGTTYRTTLAEIDRIIRDAGYEPRRRRQDYSVIEEIVAA
                     "
BASE COUNT          331 a          705 c          746 g          257 t
ORIGIN      
        1 cgccggatag tcgcagcgct caggccgagg tccttgagga ggtagacgaa gtcccgcagc
       61 agtggccgac cgacgcgggc cgggtcgcgg accccgcgcg agagcgcgaa ctcacccatg
      121 cggcgaaggt cgcgaagata cgcctcgacg gtgttggcgc tgtgccccgc ctcgagggcg
      181 aggaagtcgc gaaacccttc gagccagaag tcgcgatcga tctgctcgcg gacggcggga
      241 atcgtcatgg cggatccgtg ccgcgcaccc tccggcgcac ttccgccacc tcggcggggg
      301 tgagcccgag cagctccgcg gcgaccgtca tgacccgggc ctcctgggcg ccgatggctc
      361 cgtcgccgaa cgccacggac cacatccgct ccaccagctc gagacgctga gcgcggccga
      421 agcgctgccg cagacggtcg gcgtaggccg cgaagcgggt gcgccgctcg tcctcgggcg
      481 gtggctcgag cagcggtctg ccggcggcga ggccccagcg gtctcgcagg tgcccggcga
      541 cgaggtcgcg gtcggcgggg gtgagcaccg ggtccgcgta ggccagctcc agcaccagca
      601 gcgccgccgc ctcgcgggcg gatccctcgg cgatgtcggt gccccggaga aacgaaggcg
      661 cggcgggatc gagcgcatcc ctggtcgcgt gccagagccg ctcccctccc cgccggcgac
      721 gggccagcaa gtaccaggcg acgcccacca cgatcagcgc cgcggcgatg atgcccatcg
      781 tgcggttgac gtcctcgaga atcgtgagga tgcgctgcca ctgggtgccg agcacagtgc
      841 ccatcagggt gatgccgccg taccagatca tggacgccag ggccatgggc acgaaggtgc
      901 gaaccgggcc gagtcgcacc aagcccgcga agggcggcac caccgcgcgg atgcccggca
      961 gaaagcgact gaggaagatg ccggccacgc cgaagcggag atactcgcgc tcgattacgg
     1021 cgagcgacct gggggcgaga agccggcggc cggtcctggt ggcgaagagc cgatggccga
     1081 agcgccgggc ccccaggtag acgagcgcgg cgccgaccat gttggcggtc caggtgacga
     1141 cgaagacgag aatcggcgtc gtgacgcccc ggtgcgacag aaacgcgccg agcgccactg
     1201 cggcgtcgga aggaaccggc ggcacgacgt tctcgatcgc ggccaggagg gcgagcacgc
     1261 cgtagaccgc ggcgggcggc aggctcgcga tccattgcag gagggcttcg atcagcgtgc
     1321 ctccagcacg gcgaccgcga tcacggccag cccctctccc ttcccgatga aacccatgcc
     1381 ctcgttcgtc ttcgctttga cgctgatggc actcgcggag aggccgagct tccccgcgag
     1441 cgaggcggcc atcgcctgga gatggggtcc cagacgcggc gactcggtga tgacggtcag
     1501 atccgcctgc accagcgagt ggccgcgacc gcgcaccagc tcatgcgcgg tccgcagcag
     1561 ctccatggaa tcggcgtcct tccactgcgg atcgctgtcc gggaagagct gtccgatgtt
     1621 gcccgcggcg gcggcaccga ggatggcatc cgtcagcgcg tgagcgacgg cgtcggcgtc
     1681 cgagtgcccc tggagcccgc gcgcgcccgg aatccgcacg ccccccagct tgagtggacg
     1741 ggagtcggtg aagcggtgcg agtcgtagcc gatgcctacg cgcatgggcg gtaaggcggt
     1801 agggcggtag ggcggtagtc agcgggcctg gcgcgatagg gatgcgaacc ggtagcgcga
     1861 aagcacaccg acctaccgcc gtaccgcctt accgccttac cgctcacgcc gccacgatct
     1921 cctcgatcac cgagtagtcc tgccgccgcc ggcgcggctc gtaccccgcg tcgcggatga
     1981 tgcggtcgat ctcggccagg gtggtgcgat aggtggtccc ggcggcggag acgacgttc
//
LOCUS       DASSYW010000037         4154 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1583196, whole genome shotgun sequence.
ACCESSION   DASSYW010000037 DASSYW010000000
VERSION     DASSYW010000037.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4154)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4154)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4154
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1583196"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            306..1784
                     /locus_tag="VFN38_00610"
     CDS             306..1784
                     /locus_tag="VFN38_00610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HET9010276.1"
                     /translation="MGLWSQKSVDVLQAEASGEGHGSLRRVLGAMNLTMLGIGAIIGA
                     GIFVLTGTAAANFAGPGIVYSFIIAGMGCLFAGLCYAEFAAMIPVAGSAYTYAYATMG
                     EFVAWIIGWDLILEYLFGAATVAVGWSGYFVAFLSKFGFAFPKAYTEAPLSVIGTHTL
                     VRNPGGVLNVPAVLLVLVMTTLLVIGIKESARFNNVIVFVKVAIVFLVIGFGFMFVNS
                     ANWHPFVPPNTGTFGQFGWSGVIRGAGVVFFAYIGFDAVSTAAQEAKNPQRDMPIGML
                     GSLAICTVLYILMALVMTGLAHYTELNVPHPVDVALSKAGPGLAWLNYLVDIGAIAGL
                     ASVVLVMLMGQPRIFYSMSRDGLLPAVFGKVHPKFRTPYVTTILTGVVAAAVAGFFPI
                     ALLGELVAIGTLFAFVIVSAGVLVLRYREPNRVRPFKTPLVPLVPILGILICGALMYG
                     LPTDTWIRLAVWLVIGLVIYFLYGRSHSRIGNPDSRAPYPGD"
     gene            1856..2923
                     /locus_tag="VFN38_00615"
     CDS             1856..2923
                     /locus_tag="VFN38_00615"
                     /EC_number="3.1.3.7"
                     /inference="COORDINATES: protein motif:HMM:NF013528.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004527 - exonuclease activity [Evidence
                     IEA];
                     GO_function: GO:0008441 - 3'(2'),5'-bisphosphate
                     nucleotidase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional oligoribonuclease/PAP phosphatase
                     NrnA"
                     /protein_id="HET9010277.1"
                     /translation="MSAADYLDLLAVPAGRRADIALLAAELRAGRRVALSTHMNADGD
                     GCGSEAALARILGALGVESRIVNPTPWPAMFDFLGGDAVRDMSAKGAAALRGIDALVV
                     LDISDVKRLGQLADAVRALTVPKLVIDHHLSSDEPAGTITLSDTTACATGELVFDLAI
                     TLGVEITEPIARALYTALLTDTGGFRFSNTSPRCHAIAGRLLAAGIDPEDMYRRIYAS
                     VSLNRLQLLRDALETLRVDERNGIAWISVPAGALEQYGLQSEDLDGIVEHPRSITGTR
                     LALFFRDLGYGKVKVSFRSTGDVDVNRFARQFGGGGHAKASGALVVGSLEEVRERVVD
                     AARAFVAQSGSGTDAGAGATG"
     gene            3076..>4154
                     /locus_tag="VFN38_00620"
     CDS             3076..>4154
                     /locus_tag="VFN38_00620"
                     /inference="COORDINATES: protein motif:HMM:NF022077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mrp/NBP35 family ATP-binding protein"
                     /protein_id="HET9010278.1"
                     /translation="MADTLQQRIDAALSRVQNPRRGADVIAADMVRDIATTTGGKVRF
                     TLLLDAQDDATLVRDVRQAVEAVEGVTDVRVDVKDPSQAAWPPAPPVADRAAAAPTPP
                     PAPRPPGQGRALPTLEAPRAAAPRTPAPTPVAYPKLGRILAVSSGKGGVGKSTVSTNL
                     AVALARTGARVGLMDADIYGPNIPRMMGVDAPPPVVNNKIQPLEAHGVKVISLGFLIE
                     KDQPAIWRGPIVMKIITQFLADVDWGQLDYFIVDMPPGTGDAQLSLVQATHVHGAIIV
                     TTPQDVAVGDALRGVKMFERVAVPVLGIVENMSWFECPHCGKPTAIFGSGGGQRLADE
                     VRLPLLAQIPLYPRIQEGGDSGRPIV"
BASE COUNT          569 a         1537 c         1364 g          684 t
ORIGIN      
        1 gtcgcacccg cacgacgtga cgatcactcg cgaggcgccc aactacagtg tctgaccccg
       61 agggggcggc ggaggactcg ccgccccctc ggtgcagcca atccggccga cggtcgttag
      121 gcgcgcggcg ggacgccggg cctggaggcc tccggtccgc tcgtggtgct gcagatcacc
      181 gtttgcttga caagaacgcg gcgcgctaga caacttgggc gcgctcagcc atcctcgctg
      241 ccgggcgcgt gtcgcgcgtc ggtcggcttc tctcccccca gcgtagcccc ccggagacac
      301 gccccatggg tttgtggtcg cagaagagcg tcgacgtcct gcaagctgag gccagcggcg
      361 aagggcacgg atcgttgagg cgcgtcctcg gcgccatgaa cctcaccatg ctcggcatcg
      421 gcgccatcat cggtgccggc attttcgtcc tcaccggcac cgctgcggcc aacttcgccg
      481 ggcccggcat cgtctactcg ttcatcatcg ccggaatggg ctgcctgttc gcgggcctgt
      541 gctacgccga gttcgcggcg atgattcccg tcgccgggag cgcctacacg tacgcctacg
      601 cgacgatggg tgagttcgtc gcgtggatca tcggttggga cctcattctc gagtatctct
      661 tcggcgccgc gacggtcgcg gtcggctggt cggggtactt cgtcgcgttt ctgagcaagt
      721 tcggcttcgc gttccccaag gcgtacaccg aggcgcccct ctccgtcatc ggcacccaca
      781 ccctcgtgcg caatcccggg ggcgtgctca atgtgccggc cgtgctgctc gtcctcgtca
      841 tgacgacgct gctcgtgatc gggatcaagg agtcggcgcg cttcaataac gtgatcgtgt
      901 tcgtgaaggt cgcgatcgtc tttctggtga tcggcttcgg cttcatgttc gtgaattcgg
      961 ccaactggca cccgttcgtt ccccccaaca ccggcacctt cggccagttc gggtggagtg
     1021 gcgtcatccg cggcgcgggg gtcgtcttct tcgcctacat cggcttcgac gccgtctcca
     1081 cggccgcgca ggaggcaaag aatccgcagc gcgacatgcc gatcggcatg ctcggatcgc
     1141 tcgccatctg tacggtgctc tacatcctga tggcgctcgt gatgaccggc ctcgcgcact
     1201 acacggagct caacgttccg catccggtgg acgtcgcgct ttccaaggcg ggcccgggtc
     1261 tggcctggct gaactacctc gtggacatcg gcgcgatcgc cggtctcgcc tcggtggtgc
     1321 tcgtgatgct catggggcag ccgcgaatct tctactccat gtcccgcgac gggctgctgc
     1381 cggccgtctt cggcaaggtg caccccaagt tccggacgcc ttacgtgacg acgatcctca
     1441 ccggcgtcgt cgccgcggcg gtcgccggct tcttcccgat cgccctgctc ggcgagctgg
     1501 tggccatcgg gaccctcttc gccttcgtca tcgtgagcgc cggcgtcctc gtcctgcgct
     1561 accgcgagcc gaatcgggtt cgccccttca agacgccgct cgttcccctc gtaccgatcc
     1621 tggggatcct gatctgcggc gcgctgatgt acggcctccc gaccgacaca tggatccgtc
     1681 tcgccgtgtg gctggtgatc ggcctggtga tctacttcct gtacggtcga tcgcattcgc
     1741 ggatcggcaa tccggactcc cgggctccct atccgggcga ctgagctcct tcccagatag
     1801 cttgcatgcg gcgcccgatc gttgcgggcg ccgcgttttg cttcgttccc atctcatgtc
     1861 cgccgccgac tacctcgacc tcctcgccgt ccccgccgga cgccgcgccg acatcgcgct
     1921 ccttgccgcc gagctccgcg ccggacggcg cgtggcgctg tccacgcaca tgaacgccga
     1981 cggcgacggc tgcgggtcgg aggcggcgct ggcgcgcatc ctgggcgcgc tcggggtcga
     2041 gagccggatc gtcaatccga ccccctggcc ggcgatgttc gacttcctcg gcggcgacgc
     2101 cgtgcgcgac atgagcgcca agggcgccgc ggcactgcgc ggaatcgacg cgctcgtcgt
     2161 gctcgacatc agcgacgtca agcggctcgg ccagctcgcc gacgcggtcc gcgcgctcac
     2221 cgtgccgaag ctggtgatcg accatcacct gtcgagcgac gagcccgccg ggacgatcac
     2281 cctcagcgac acgacggcct gcgccacggg ggagctggtc ttcgacctcg cgatcaccct
     2341 gggggtcgag atcacggagc cgatcgcccg cgcgctctac accgcgctcc tcaccgatac
     2401 gggcgggttt cgcttcagca acacctcgcc gcgctgccac gcgatcgccg gccggctgct
     2461 cgccgccggc atcgatcccg aggacatgta ccggcggatc tacgcctccg tctcgctcaa
     2521 ccgcctgcag ctgctgcgcg acgcgctcga gacgctccgc gtggacgagc ggaacggcat
     2581 cgcctggatc tcggtgcccg cgggcgccct cgagcagtac ggcctccagt cggaggacct
     2641 cgacggcatc gtcgagcatc cccgctccat caccggcacc cgcctcgcgc tcttcttccg
     2701 cgacctcggc tacggcaagg tgaaggtctc cttccgcagc acgggcgacg tggacgtcaa
     2761 ccgcttcgcc cggcagttcg gcggcggcgg acacgccaag gcgtcgggtg cactcgtcgt
     2821 ggggagcctg gaggaggtgc gcgagcgggt ggtggacgcg gcacgcgcct tcgtcgcaca
     2881 gtcggggagc ggcaccgacg ccggggccgg cgccacgggt tgatccggcg cgcctccggt
     2941 gcgcggcgcc ggaggtcggc ttgtgaacgc ttccctccgc cgggtagctt acgaggcgga
     3001 ccggggcgag cgccgcccgc aggacgcgcc tccagcgcga caggccacgc gccccgccgc
     3061 cctccataaa tctcaatggc cgacactctc cagcagcgca tagacgccgc gctctctcgc
     3121 gtccagaacc cgcgccgcgg cgccgacgtg atcgccgccg acatggttcg cgacatcgcc
     3181 acgaccaccg gcggcaaggt tcgcttcacc ctcctcctcg acgcccagga cgacgccacc
     3241 ctcgttcgcg acgtccgcca ggccgtcgaa gcggtggaag gggtcaccga cgttcgcgtc
     3301 gacgtgaagg acccctcgca ggccgcctgg ccccccgcgc cccccgtcgc cgatcgggca
     3361 gcggcggcgc cgacgccccc tccggccccg cgcccccccg gacagggacg cgccctgccc
     3421 acgctcgagg cgccccgcgc cgccgccccc cggacgcccg ccccgacgcc ggtcgcatat
     3481 ccgaagctcg ggcgcatcct cgccgtgtcg agcggcaagg ggggggtggg gaagtccacc
     3541 gtgtccacca acctcgcggt cgccctcgcg cgcaccggcg cccgcgtcgg cctcatggac
     3601 gccgacatct atggcccgaa catcccgcgc atgatggggg tggacgcgcc gccgccggtg
     3661 gtcaacaaca agatccagcc gctcgaggcg cacggggtca aggtgatcag cctcggcttc
     3721 ctgatcgaga aggaccagcc ggcgatctgg cgcgggccga tcgtgatgaa gatcatcacg
     3781 cagttcctcg ccgacgtgga ttgggggcag ctcgactact tcatcgtcga catgccgccg
     3841 ggaacgggag acgcccagct ctcgctcgtc caggcgaccc acgtgcacgg cgcgatcatc
     3901 gtcacgacgc cgcaggacgt cgcggtcggc gacgcgctgc gcggagtcaa gatgttcgag
     3961 cgggtggccg tgccggtgct cggcatcgtc gagaacatga gctggttcga gtgcccgcac
     4021 tgcggcaagc cgaccgcgat cttcgggagc ggtggcggac agcgcctggc cgacgaggtg
     4081 cggcttcccc tgctcgcgca gatcccgctc taccctcgca tccaggaggg gggggacagc
     4141 ggccgcccga tcgt
//
LOCUS       DASSYW010000038         4428 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_754477, whole genome shotgun sequence.
ACCESSION   DASSYW010000038 DASSYW010000000
VERSION     DASSYW010000038.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4428)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4428)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4428
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_754477"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..636
                     /locus_tag="VFN38_00625"
     CDS             <1..636
                     /locus_tag="VFN38_00625"
                     /inference="COORDINATES: protein motif:HMM:NF016176.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HET9010279.1"
                     /translation="KPPLNGDLMLVRLSAALILLSPLAVPAALAQAVPAPVAPNVWTI
                     DNTHSGVGFQVRHFVSKVRGKFRDVKGTITADENAWQNATVDVEIATASISTDNDRRD
                     AHLRSPDFFAADSFPVLRFRSTRIERNGDAAKIHGDLTMRGVTRPVVLDGTFTGLMKS
                     AQGDRVGFEASTTINRLDFGVKYNRAVEGGGVMLGDEVKVEITIEAVRPRR"
     gene            958..3972
                     /locus_tag="VFN38_00630"
     CDS             958..3972
                     /locus_tag="VFN38_00630"
                     /inference="COORDINATES: protein motif:HMM:TIGR04056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0071702 - organic substance transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SusC/RagA family TonB-linked outer membrane
                     protein"
                     /protein_id="HET9010280.1"
                     /translation="MLALVTCLLAALPSVAQAQSREVTGRITTMGSGAPLQDATVTVV
                     GQATGARTNERGEFRVRVSGGDVTLLARALGYKRRELRVPASSQTANFSLERDALQLE
                     GVTITGTATTVDRRNAGVAVVSVSGEDISRVPAPALESALQGKVVGAQISMNNGAPGG
                     GGQIQIRNASSLLGRIDPLYVVDGVIISNAVRSSGQATITGSLNAGEENGTNRLADIN
                     PNDVENIEILKGAAASAIYGSQATNGVVVITTKRGRSGATQVGVTQRVGTSQLIRKKG
                     SRHFTSLAQALSVSNNTATRAAITAAFANGVPEYQDYQQQLFGETSPTVETIVNVTGG
                     SDNTKFYVSGDDKQEKGIARNTAARRQSLRFNIDQSLGTKLTAQLGGTIVRSFSQRGV
                     SNNDNALSSPLYAFAYTPAIFALDQKDASGKYPDNPAVGYGASNPFDTFERLVNNEDV
                     YRQIANGRLNYAVFSNSQNDVQLSVLAGADRYSNEGYAYGPPDLQFLRPGTPQGGSYP
                     GVAIQGNGTGLLTNSSLNAVWTFTPSNRWFSATTSGGLQAEDSEGNDYSITGRGTVPT
                     LTNAAGTANTAVGQGRSFIRSRAFYAQEQILAFDDKFLIAGAVRGEKSSVNGDVDKLY
                     YFPRGQVSYRITDLIPYVSELKLRASLGESGNRPDYGARFVTLTNAGLIGGRAGLIQA
                     ATLGNPNIRPERMHEAEYGLDAAMLNDRVRFEGTYYDRRIKDLLVRAQLAQSTGVNLQ
                     NINGGTMQSKGVELALTLLPVQSTGAGLNWVSRTSWYQSSTKILEFIEGIRPFTTGTA
                     AGGFGNAYGRLRYAPGYSVSTIWGNQIQADGSVKPDTPMGDANPQYLMGFGNDFTYGN
                     FTLNSVVDYRRGGLVSNMTKNLFDEGQNTWDYDDASPDPTIGTTLGDYRYNLWAGGTN
                     TAAYLDDGSYVKVREVTLGYTLPQSMVNKLSAISAKSARLSLSGRNLFIISGYNGFDP
                     EVNNGGNFVARFVDLAPFPPSRSFFLSVDLGF"
     gene            4030..>4428
                     /locus_tag="VFN38_00635"
     CDS             4030..>4428
                     /locus_tag="VFN38_00635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010281.1"
                     /translation="MRFTFRRGVFAVAAAASLAACQNDLTLPNYNSPTVEGLSGDPAG
                     LQLAATGILASERNNYFGYIRDVSLFGREGYYYFQTDARYVSDYLIGAGTGSAKALSS
                     TGFAAGNWFGYFRNQRNAVNLVNAADGSSLS"
BASE COUNT          758 a         1607 c         1400 g          663 t
ORIGIN      
        1 aaacccccgc tcaacggaga cctcatgctc gtccgcctgt ccgccgccct gatcctcctc
       61 tcccccctcg ccgttcccgc cgcgctcgcg caggccgtcc ccgccccggt cgcgcccaac
      121 gtctggacca tcgacaacac ccactcgggg gtcggcttcc aggtccggca cttcgtgagc
      181 aaggtgcgcg gcaagttccg cgacgtgaag gggacgatca ccgccgacga gaacgcctgg
      241 cagaacgcca cggtggacgt cgagatcgcg acggcgagca tcagcaccga caacgaccgg
      301 cgcgacgcgc atctccgctc gccggacttc ttcgccgcgg acagcttccc cgtgctccgg
      361 ttccggagca cccggatcga gcgcaacggc gacgcggcga agatccatgg cgacctcacc
      421 atgcgcggag tcacgaggcc ggtggtgctc gacggcacct tcaccggcct gatgaagtcc
      481 gcgcaggggg accgcgtcgg cttcgaggcc tccacgacga tcaaccgcct ggacttcggc
      541 gtgaagtaca atcgcgcggt ggagggggga ggggtgatgc tgggcgacga ggtaaaggtg
      601 gagatcacca tcgaggcggt tcggccgcgg cgctgaccgg ccttccgcgc gaggtccagg
      661 gtgccgcgag atcacccgcg gcacccctgt tggtctcttc ggcaactgtt cgggatccca
      721 cccgcgaaac ggggatggtg cgcattgaca gccccggccc gtgcccgcac tttcgtggac
      781 ttcgcacggt cgagctcggt gcacgagcag tgacgagctg tcagttcgga gtgacgaggc
      841 gaaaggtctc ggggtcaagg atgcggtcac cccgcttccc tccccgccca tcagtgcgtg
      901 gtcgaccctc tagtagtccc cacctattcg tttttcggag gcccagtgag aaggaatttg
      961 ctcgctttgg ttacctgcct gctggcggcg ttgccgtcgg tcgcgcaggc gcagtcacgt
     1021 gaggtgacgg gtcggatcac cacgatgggc agcggcgcgc cgctgcagga tgcgacggtt
     1081 accgtggttg gccaggcgac tggggcccgc acgaacgagc gcggcgagtt ccgcgtccgc
     1141 gtttccggcg gcgacgtcac gctgctcgcg cgggcgctgg gctacaagcg gcgcgagctg
     1201 cgcgtgcccg cgtcctcgca gaccgcgaac ttctcgctcg agcgcgacgc gctccagctc
     1261 gagggcgtga ccatcaccgg caccgccacc accgtcgacc ggcgcaacgc cggcgtcgcc
     1321 gtggtgagcg tgagcggcga ggacatctcc cgcgttcccg ccccggcgct cgagagcgcg
     1381 ctgcagggca aggtcgtggg cgcgcagatc agcatgaaca acggcgcacc gggcggcggc
     1441 ggccagatcc agatccgcaa tgcctcgtcg ctgctcggcc gcatcgatcc gctctacgtc
     1501 gtggacggcg tgatcatctc caacgcggtc cgctccagcg ggcaggcgac catcaccggc
     1561 tcgctcaacg cgggtgagga gaacggcacc aaccgcctcg cggacatcaa cccgaacgat
     1621 gtcgagaaca tcgagatcct gaagggtgcg gccgcgtcgg ccatctacgg ctcgcaggcc
     1681 accaacggcg tcgtcgtcat cacgaccaag cgcggccgct ccggcgccac ccaggtcggc
     1741 gtcacccagc gggtcggcac ctcgcagctc attcgcaaga agggctcgcg gcacttcacg
     1801 agcctcgccc aggcgctgag cgtgagcaac aacacggcga cccgcgccgc catcaccgcg
     1861 gccttcgcca acggcgtccc cgagtaccag gactaccagc agcagctgtt cggcgagacc
     1921 agcccgacgg tggagacgat cgtcaacgtc accggcggca gcgacaacac caagttctac
     1981 gtctcgggcg acgacaagca ggagaagggc atcgcgcgga acaccgcggc gcgccgccag
     2041 tcgctccgct tcaacatcga ccagtcgctc ggcacgaagc tcaccgcgca gctcggtggg
     2101 acgatcgtcc gctcgttctc gcagcgcggc gtgtccaaca acgacaacgc cctttccagc
     2161 ccgctgtacg ccttcgccta caccccggcc atcttcgcgc tggaccagaa ggatgcgtcg
     2221 ggcaagtacc cggacaaccc ggccgtgggc tacggcgcgt cgaatccgtt cgacaccttc
     2281 gagcgcctcg tcaacaacga ggatgtctac cgccagatcg ccaacgggcg cctgaactac
     2341 gcggtgttct cgaattcgca gaacgacgtc cagctcagcg tcctcgccgg cgccgaccgg
     2401 tacagcaacg agggctacgc ctacggcccg cccgacctgc agttcctccg gccgggcacc
     2461 ccgcagggcg gctcgtatcc gggcgtcgcc atccagggta acggcaccgg gctcctcacc
     2521 aacagctcgc tgaacgcggt ctggaccttc acgccgtcga accgctggtt ctcggccacc
     2581 acctccggcg gtctgcaggc cgaggattcc gagggcaacg actactccat cacggggcgc
     2641 ggcacggtgc cgacgctcac gaacgccgcc ggcaccgcga acaccgccgt cggccagggg
     2701 cgctcgttca tccgcagccg cgccttctac gcccaggagc agatcctggc gttcgacgac
     2761 aagttcctca tcgccggcgc ggtccgcggc gagaagagca gcgtgaacgg cgacgtggac
     2821 aagctctact acttcccgcg cggccaggtc tcgtaccgca tcaccgacct gatcccgtac
     2881 gtgagtgagc tcaagctccg cgcctcgctc ggcgagtcgg gcaaccgccc cgactacggc
     2941 gcgcgcttcg tcaccctgac gaacgccggc ctcatcggcg gccgcgctgg cctcatccag
     3001 gccgccacgc tgggcaaccc gaacatccgg cccgagcgca tgcacgaggc cgagtacggg
     3061 ctcgacgccg cgatgctcaa cgaccgcgtc cggttcgaag gcacctacta cgaccgccgc
     3121 atcaaggatc tgctcgtgcg cgcccagctg gcgcagtcca cgggcgtgaa cctccagaac
     3181 atcaacggcg gcaccatgca gtccaagggc gtcgagctcg cgctcacgct gctgccggtc
     3241 cagagcaccg gggcggggct gaactgggtc tcccgcacct cgtggtacca gagctccacc
     3301 aagatcctcg agttcatcga gggcatccgc cccttcacga cgggcacggc ggcgggcggc
     3361 ttcggcaacg cgtacggccg tctgcgctac gcgccgggct actcggtgtc gacgatctgg
     3421 ggcaaccaga tccaggccga tgggtcggtg aagcctgaca ccccgatggg tgacgcgaac
     3481 ccgcagtacc tgatggggtt cggcaacgac ttcacctacg gcaacttcac gctgaactcg
     3541 gtggtggact atcgccgcgg cggtctcgtc tcgaacatga cgaagaacct cttcgacgaa
     3601 ggccagaaca cctgggacta cgacgacgcg tcccccgatc ccacgatcgg caccacgctc
     3661 ggcgactacc gctacaacct gtgggcgggc ggcacgaaca ccgccgcgta cctggacgat
     3721 ggctcgtacg tcaaggtgcg cgaggtcacg ctcggctaca ccctgcccca gagcatggtc
     3781 aacaagctgt cggccatcag cgccaagtcg gcgcgcctca gcctgagcgg gcgcaacctc
     3841 ttcatcatct cgggttacaa cggtttcgac cccgaggtga acaacggcgg caacttcgtc
     3901 gcgcggttcg tcgatctcgc gccgttcccg cccagccggt cgttcttcct cagcgtcgat
     3961 ctcgggttct agtcgatgtc caaccttact gacttcacgc ctcccacgag gcgcttctca
     4021 agaggactga tgcgattcac tttccggcgc ggtgtcttcg cggtcgcagc ggcagcatcg
     4081 ctcgcggcgt gccagaacga cctgacgttg ccgaactaca actcgcccac cgtcgaagga
     4141 ctgtcgggcg atcccgcggg gctccagctg gccgccacgg gtatcctggc cagcgagcgg
     4201 aacaactact tcggctacat ccgcgacgtg tcgctgttcg ggcgcgaggg gtactactac
     4261 ttccagaccg acgcgcgcta cgtgtcggac tacctcatcg gcgccggcac cggcagcgcg
     4321 aaggcgctgt cgtccaccgg cttcgcggcg gggaactggt tcggctactt ccgcaaccag
     4381 cggaacgccg tcaacctcgt gaacgcggcc gacggctcca gcctgtcg
//
LOCUS       DASSYW010000039         2624 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1343730, whole genome shotgun sequence.
ACCESSION   DASSYW010000039 DASSYW010000000
VERSION     DASSYW010000039.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2624)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2624)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2624
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1343730"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..962
                     /locus_tag="VFN38_00640"
     CDS             <1..962
                     /locus_tag="VFN38_00640"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HET9010282.1"
                     /translation="SHPLHLGFCSFPYVTEADCILVLDHDVPWVPAQGQPSAGCRVIQ
                     MDIDPLKRGMPFWGFAVDLSIEANSQQALPALADLVERRLSDADRDRIDARRRGARAD
                     HDAQRTGWRQRALDLATRQPIAPEWAAHCLSRFMDAQTRVVSEAVSNNPALWHHLELD
                     SPGSYYQSLGSGLGWGLGAAVGAKLADPAKTIVCVVGDGSWAFGSPIVAYWMAERYGT
                     PFLTVILNNQGYAATKEAIRGVAPGGYARTTGTYPACDVPTPPQRYASLAEAMGLWAK
                     TVHDPAALEGAIRDALSEVRNGRSALVDIRISASPQYEELPDE"
     gene            955..>2624
                     /locus_tag="VFN38_00645"
     CDS             955..>2624
                     /locus_tag="VFN38_00645"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-ribosomal peptide synthetase"
                     /protein_id="HET9010283.1"
                     /translation="MSDPVGRSLRHLIDAHARQSPDAAAILAPRRRPLTYSLLSRQIG
                     EIVTALNALGIGRHDRVAIVVPDGPEMAVVSLAVAAGATCAPLNPASRAAEFEADLAR
                     LHCRALLVPVGSTSPAVTAARARGIAVLELIPVPDGEAGRFTLCGGVSGRLPRGVRSG
                     AAGPDDVALVLQTSGTAAQPKIVPLTHANIAAAAQSICDALDLTSGDRCLSVMPLFHI
                     HGLSAVFASMASGASVVCPGAFDGPAFFDWMQAFAPTWYTAAPTIHREILDQASQHPG
                     VVAPSPLRFIRSASAAMPRQLMADVERVFGVPFVEAYGMTEAGPQIASNRLSPGGRKP
                     GSVGRPAGPEVAIVDGEVVIRGANVCVKDWLHTGDLGHLDADGFLFITGRLKEVINRG
                     GEKISPHEVDEVLLDHGAVAQAVTFPIPHPTLGEDVAAALVLRPDAATASRDELVRDI
                     RAFASGRVAEFKVPQLLVVVNEIPADAGGKVHRLELAAQLGVQTQDRRLAEFVAPGTE
                     LEERLAAIWAPLLGVARVGLHDNFFLSGGDSLKAAQVMSRLSRDFQIEL"
BASE COUNT          372 a          920 c          918 g          414 t
ORIGIN      
        1 cgagccatcc gctgcacctc gggttctgct cgtttccgta tgtcaccgag gccgactgca
       61 ttctggtgct cgatcacgat gtgccgtggg tgccggcgca ggggcaaccg tccgccggct
      121 gccgcgtcat ccagatggat atcgacccat tgaaacgggg gatgcccttc tggggattcg
      181 cagtcgatct ctccatcgag gccaactcgc agcaggcgct gccggcgctg gccgatctcg
      241 tggaacggcg gctcagcgac gccgatcgcg atcgcatcga cgcgcggcgc cgcggcgcgc
      301 gagccgatca cgacgcgcag cgaaccggct ggcggcagcg agcgctcgat ctcgccacgc
      361 gacagccgat tgcgcccgaa tgggcggccc actgtttgag ccggttcatg gacgcgcaga
      421 cgcgggtcgt cagcgaggcc gtcagcaaca acccggccct ctggcaccac ctggagctgg
      481 actcgcccgg cagctattac cagagtctcg gctccggcct cggttggggc cttggcgccg
      541 ccgtgggcgc caagctcgcc gatcccgcca agacgatcgt ctgcgtggtc ggagacgggt
      601 cgtgggcctt cggctcgccc atcgtcgcgt attggatggc cgagcggtac ggcacgccgt
      661 tcctgaccgt gatcctgaac aaccagggat acgccgccac gaaggaagcg atccgcggcg
      721 tggcgcccgg aggctacgcg cgaaccacgg gcacgtatcc ggcgtgcgac gtgcccaccc
      781 caccgcagcg atacgccagc ctggcggaag cgatggggct gtgggcgaag accgtgcacg
      841 accccgcggc gctcgagggc gcgattcgcg acgcgctcag cgaagtccgc aacgggcgct
      901 cggcgctggt ggatatccgc atctccgcgt ccccgcagta cgaggagttg ccggatgagt
      961 gatcccgtgg ggcgcagcct gcgtcacctg atcgacgcgc acgccaggca gagccctgac
     1021 gccgctgcga ttcttgcgcc tcggcgccgg ccgctgacgt acagccttct gagccgccaa
     1081 atcggcgaga tcgtgaccgc gctcaacgcg ctggggattg gccgtcacga tcgcgtggcg
     1141 atcgtcgtgc ccgacggacc cgagatggcg gtcgtgtcgc tggcggtggc ggcgggcgcc
     1201 acctgtgcgc cgctcaaccc ggcctctcgc gccgctgaat tcgaggccga tctcgcgcgg
     1261 ctccactgtc gcgcgctgct cgtgccggtg ggctccacct cacccgccgt cacggcggcg
     1321 cgggcgcgcg gcatcgcggt gctcgagctg attccagtgc cggacggcga ggccggccgc
     1381 tttacgctgt gcggcggcgt gtcgggccgt cttcctcgcg gcgtccgatc cggagccgcg
     1441 ggaccggacg acgtggcgct ggtgctccag acctcgggaa cggcagcgca gccgaagatc
     1501 gtgccgctca cgcacgccaa catcgccgcg gccgcgcaga gcatctgcga tgcgctcgac
     1561 ctgacgtcag gcgaccgctg cctgagcgtg atgccgctct tccacatcca tggtctgagc
     1621 gcggtgtttg cgtcgatggc ctccggggcc agcgtcgtgt gccccggtgc gttcgacgga
     1681 ccggccttct tcgactggat gcaggcgttc gcgcccacgt ggtacaccgc ggcgccgacg
     1741 attcaccgcg agatcctcga ccaggcgtca cagcatcccg gcgtcgtcgc gccgtcgccg
     1801 ctgcggttca tccgctccgc gtccgcggcc atgccgcgcc agctcatggc ggacgtcgaa
     1861 cgcgtcttcg gcgttccctt cgtcgaagcc tacgggatga ccgaggcagg tcctcagatc
     1921 gcgagcaacc ggctctcgcc cggcgggcgg aagcccgggt cggtggggcg tccagcaggc
     1981 cctgaggtcg cgatcgtgga cggcgaggtc gtgattcgag gggcgaacgt ctgcgtgaag
     2041 gattggctcc acaccggcga cctgggtcat ctcgatgcgg acgggttcct gttcatcacc
     2101 ggccgcctca aggaagtcat caatcgcggc ggggaaaaga tctcgcccca cgaagtggac
     2161 gaagtgctgc tggaccacgg cgcggtggcc caggcggtga cctttcccat tcctcatccg
     2221 acgctcggcg aagacgtcgc ggccgctctc gtcctgcggc cggacgcggc gaccgcgtcg
     2281 cgcgacgagc tcgtgcgcga catccgtgcc ttcgcctcgg gccgcgtggc cgagttcaag
     2341 gtcccgcagc tcctcgtcgt cgtgaacgag atcccggcgg acgccggcgg caaggtgcat
     2401 cggctcgaac tggcggcgca gctcggtgtg cagacgcagg accggcgact ggccgaattt
     2461 gtcgcgcccg gcaccgaact ggaagagcgg ctggccgcca tctgggcccc gctgctcggc
     2521 gtggcgcggg tcggcctcca cgacaacttc ttcctgagcg gcggcgactc gctgaaggcc
     2581 gcgcaggtga tgtcgcgtct gagccgggac ttccagatcg agct
//
LOCUS       DASSYW010000040         3888 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1122611, whole genome shotgun sequence.
ACCESSION   DASSYW010000040 DASSYW010000000
VERSION     DASSYW010000040.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3888)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3888)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3888
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1122611"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..645
                     /locus_tag="VFN38_00650"
     CDS             <1..645
                     /locus_tag="VFN38_00650"
                     /inference="COORDINATES: protein motif:HMM:NF018095.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HET9010284.1"
                     /translation="FGDGVQAYERGQFANAQRLFARTASRVPRAADAWANLGTAAWAR
                     GDTAHAVLGWQRALRLDPLDDDTRDRLAAVQPPVIGAPGYVPPLPADALAVVALALWM
                     AAWLGLAVQAVRRTPHLRPVAGGALAVALVALAAALELQDRAGVRGLGVLRGTRALLE
                     SPTPGAPSAATATAGEVAAVGVREGAWVRVSFGEGRAGWLPAAAVVTLDAAGVD"
     gene            679..2460
                     /gene="mutL"
                     /locus_tag="VFN38_00655"
     CDS             679..2460
                     /gene="mutL"
                     /locus_tag="VFN38_00655"
                     /inference="COORDINATES: protein motif:HMM:TIGR00585.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HET9010285.1"
                     /translation="MARIAVLPPAVADQIAAGEVVERPSSALKELVENALDAGATAID
                     IAVEDGGRALIRVSDDGSGMERDDALLALERHATSKIRLASDLVGVASFGFRGEALPA
                     ICSVSQLAIETAPADGAGTAIHAAGGAVQEVRDVARRRGTTIAVSRLFFNAPARQKFL
                     RGARAEWRSIMDAVTSVALTRRDVRLTISHDGKPMLTLPAATSLRERVAALWGADAAD
                     RLLDVEDVRGAIQVSGLVERPSDVGTASRRTFLTVNGRPIRDNGLLRAADAAYRSTLA
                     AGLRPSLLLEIVVPADSVDVNVHPAKAEVRFRDRWTVERAVEEAVRRALGTFDAGAAL
                     GARRWSIGAPWTPGASAADVDLLRAAPAPADGLFEPRDEERPLAADGQALRLPEPDFP
                     DAPRASEPSPAIVVPPLLQLRRTYLLFEHDDGVVLIDQHSAHERVLYEQFMGMLERGE
                     APSQRLLFPLTLHLSPAESDAFETNRGMLERLGFEIEGFGGHTLLVNAVPMPHPRFDA
                     ERCLRETLAALAGDREAAAHARHERLAATVACKAAIKAGDELSQGEMRALFVALGDTT
                     LPAHDVHGRSTIVQLSWPELERRFGRQ"
     gene            2447..3373
                     /gene="miaA"
                     /locus_tag="VFN38_00660"
     CDS             2447..3373
                     /gene="miaA"
                     /locus_tag="VFN38_00660"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: protein motif:HMM:TIGR00174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0052381 - tRNA dimethylallyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HET9010286.1"
                     /translation="MDDSDAAPPVVRVICGPTAAGKTYAAALCARFAEVAVISADSRQ
                     VYRGFDVGTAKPTVRERLAAPHYGIDVLDPTERASAAWWATEADGWIRGATAQGRMPI
                     VVGGTGLYLRALFGELFDEPPMDPERRRALQRELEAMSVQTLRRWVEVLDPPRAALGR
                     TQLLRAIEVALLTGRRVSELQRERRTVPRWRARYLVVDPGPELQDHIADRADFMLSTG
                     WQEEVRALMTTVPADAPAWNASGYRVVRELVEGRISFGEARERVIIETRQYAKRQRTW
                     FRHQLGGADVTRLDVHAVGFEQALRAWWEGSA"
     gene            3370..>3888
                     /locus_tag="VFN38_00665"
     CDS             3370..>3888
                     /locus_tag="VFN38_00665"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HET9010287.1"
                     /translation="MKIGITCYPTYGGSGAVATELGIALAARGHEIHFITYQQPFRLP
                     SFLPRIYFHEVDVGRYPLFEYPPYDLALAVRMHEVVLKHELDLLHVHYAIPHATSAWI
                     AREMLIPTRPDIKVLTTLHGTDITIVGQDPSFHAITKFSIEKSDGLTAVSSFLQQETL
                     TAFGCTACRIEVI"
BASE COUNT          504 a         1422 c         1422 g          540 t
ORIGIN      
        1 ttcggcgacg gcgtgcaggc ctacgagcgc gggcagttcg cgaacgcaca gcggctgttc
       61 gcccgcacgg cgtcccgcgt gccgcgcgcc gcggacgcgt gggcgaatct cggtacggcc
      121 gcctgggcgc gcggcgacac cgcgcacgcc gtgctgggat ggcagcgcgc gctgcgcctc
      181 gatcccctgg acgacgacac gcgcgaccgg ctcgccgcgg tgcagccgcc tgtgatcggt
      241 gcccccggct acgtgccgcc gctgccggcg gacgcactcg cggtggtggc gctcgcgctg
      301 tggatggcgg cgtggctcgg tctggccgtc caggcggtgc gccgcacgcc gcatctgcgg
      361 ccggtggccg gtggagcgct cgccgtcgcg ctcgtcgcgc tggccgcggc gctcgagctc
      421 caggaccgcg ccggcgtgcg cgggctgggc gtgctgcgcg gcacgcgtgc gctgctcgag
      481 tcgcccaccc ccggcgcgcc ctccgccgcc acggcgacgg cgggcgaggt ggccgccgtc
      541 ggtgttcgcg aaggcgcatg ggtgcgcgtt tccttcggcg aagggcgcgc cggatggctc
      601 cccgcggcgg cggtcgtcac gctcgacgcg gccggcgtgg attgaccgcc ccgccgccgc
      661 tcggatagca ttcgcgggat ggcacgcatc gcagtccttc cgcccgccgt ggccgaccag
      721 atcgccgccg gcgaggtggt cgagcggccg tcgtccgcgc tcaaggagct cgtcgagaac
      781 gcgctcgacg ccggcgccac ggcgatcgac atcgccgtcg aggacggcgg ccgcgccctc
      841 attcgcgtga gcgacgacgg cagcggcatg gagcgcgacg acgccctgct ggcgctggag
      901 cgccacgcga cgtccaagat ccggctggcg tcggacctcg tcggcgtcgc gagcttcggc
      961 ttccgcggcg aggcgctgcc ggccatctgc tcggtgagcc agctcgcgat cgagacggcg
     1021 cccgccgacg gcgcgggcac ggcgatccac gccgccggcg gcgcggtgca ggaggtgcgc
     1081 gacgtggcgc gccgccgcgg cacgacgatc gccgtttcgc gcctgttctt caacgcgccg
     1141 gcgcgacaga aattcctgcg cggtgcgcgc gcggaatggc gcagcatcat ggacgccgtc
     1201 acctccgtgg cgctcacgcg gcgggacgtg cgcctcacca tcagccacga cggcaagccg
     1261 atgctcaccc tgccggccgc cacgtcgctg cgtgagcggg tggccgcgct ctggggcgcc
     1321 gacgccgccg accgcctgct cgacgtggag gacgtgcgcg gcgccatcca ggtgagcggg
     1381 ctggtcgaac ggccgtccga cgtgggcacc gccagccggc gcaccttcct caccgtgaac
     1441 ggccgcccga tccgcgacaa cgggctgctg cgcgccgccg atgccgcgta tcgctccacg
     1501 ctcgccgccg gcctgcggcc gtcgctgctg ctcgagatcg tcgtgccggc ggacagcgtg
     1561 gacgtcaacg tccaccccgc caaggcggag gtgcgttttc gcgaccgatg gaccgtggag
     1621 cgcgcggtgg aagaagcggt gcggcgcgcc ctcggcacct tcgacgccgg cgccgcgctc
     1681 ggcgcgcgcc gctggtccat cggcgcgccg tggacgccgg gtgcaagcgc ggccgacgtc
     1741 gatctcctgc gcgccgcgcc ggcgccggcc gacggcctgt tcgagccgcg cgacgaagag
     1801 cgaccgctcg cggccgatgg gcaggcgctc cgcctgcctg aaccggactt ccccgacgcg
     1861 ccgcgcgcgt cggagccgtc accggcgatc gtcgtgccgc cgctgctgca gctccggcgc
     1921 acctacctgt tgttcgagca cgacgacggc gtcgtgctca tcgaccagca ctcggcacac
     1981 gagcgcgtgc tgtacgagca gttcatgggc atgctcgagc gcggcgaagc accatcgcag
     2041 cggctgctct tcccgctcac cctccatctc tcgcccgccg agagcgacgc gttcgagacg
     2101 aaccgcggca tgctcgaacg gctcggcttc gagatcgagg gattcggcgg ccacacgctg
     2161 ctcgtgaacg ccgtgccgat gccgcacccg cggttcgacg ccgagcgctg cctgcgcgag
     2221 acgctggcgg cgctggcggg ggaccgcgag gccgcggccc acgcccggca cgagcggctc
     2281 gccgccaccg tggcgtgcaa ggcggcgatc aaggccggcg acgagctgtc gcagggcgag
     2341 atgcgcgcgc tgttcgtcgc cctcggcgac acgacgctgc cggcgcacga cgtgcacggc
     2401 cgctccacca tcgtgcagct ctcctggccc gagctcgagc gccgctttgg acgacagtga
     2461 cgcggcgccc cccgtcgttc gcgtcatctg cggaccgacg gcggcgggca agacgtacgc
     2521 ggcggcgctg tgcgcgcggt tcgcggaggt cgccgtgatc agcgccgact cgcggcaggt
     2581 gtatcgcgga ttcgacgtcg gcaccgccaa gcccaccgtg cgcgagcgtc tggcggcgcc
     2641 ccactatggc atcgacgtgc tcgaccccac ggagcgcgcc tccgcggcgt ggtgggccac
     2701 cgaagcggat gggtggatcc gcggcgccac cgcgcagggc agaatgccga ttgtcgtcgg
     2761 cgggacgggc ctctaccttc gcgcgctctt cggggagctg ttcgacgagc cgccgatgga
     2821 tccggagcga cgacgggcgc tgcagcggga gctggaggcg atgtcggtgc agacgctccg
     2881 gcgctgggtc gaggtcctgg atccaccgcg cgccgcgctc ggccgtaccc agctgctgcg
     2941 ggccatcgag gtggccttgc tcacgggccg ccgggtgagc gagctgcagc gggaacgccg
     3001 gacggtccct cgctggcgcg cgcgctatct tgtcgtcgat ccgggaccgg agcttcagga
     3061 ccacatcgcc gatcgcgcgg acttcatgct ctcgacggga tggcaggagg aagtgcgggc
     3121 gctgatgacg accgtgccgg ccgacgcacc ggcctggaac gcgtcgggat atcgggtggt
     3181 tcgtgagctg gtggaaggac ggatctcatt tggcgaggcg agagagcgcg tgatcatcga
     3241 gacccggcag tacgccaagc ggcagcgcac ctggttccgc caccagctcg gcggtgccga
     3301 cgtcacgcgc ctcgatgtgc atgccgtcgg cttcgagcag gcgctgcgcg cctggtggga
     3361 ggggagcgca tgaagatcgg catcacctgc tatcccacct atggcggatc gggcgccgtc
     3421 gccacggagc tggggatcgc gctcgccgcg cggggccacg agatccactt catcacctac
     3481 cagcagccct tccggctgcc gtcgttcctg ccgcgcatct acttccatga agtggacgtc
     3541 ggccggtatc cgctgttcga gtatccgccg tacgacctgg cgctggcggt gcggatgcac
     3601 gaggtcgtgc tcaagcacga gctcgacctc ctgcacgtgc actacgccat cccgcacgcc
     3661 accagcgcct ggatcgcccg ggagatgctc atccccacgc gccccgacat caaggtgctg
     3721 acgacgctgc acggcaccga catcacgatc gtggggcagg accccagctt ccatgcgatc
     3781 acgaaattct cgatcgagaa gtcggacggc ttgaccgcgg tgtcgtcgtt cctgcagcag
     3841 gaaaccctga cggcgttcgg ctgcaccgcg tgccgcatcg aagtcatc
//
LOCUS       DASSYW010000041         2075 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1693947, whole genome shotgun sequence.
ACCESSION   DASSYW010000041 DASSYW010000000
VERSION     DASSYW010000041.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2075)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2075)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2075
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1693947"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..891
                     /locus_tag="VFN38_00670"
     CDS             <1..891
                     /locus_tag="VFN38_00670"
                     /inference="COORDINATES: protein motif:HMM:TIGR03991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010288.1"
                     /translation="ASFADGAATLDELAASQGSDARACEIGGWWADEVWHLLRDLGAQ
                     LADDVPLLAASLDCDRAPSTTVLGAQGVYVERGAVIEPLVVLDAAAGPILVRRGAVVQ
                     SFTRLVGPCYVGEQATIVGDRVSGCSIGEVAKVRGEISASIVLGHSNKGHDGFVGHSY
                     LGRWVNLGAGTTTSNLKNTYGPVALVTPSGVRDTGLQFLGTLFGDHAKTGIGLRLTTG
                     SVVGAGANVYGSAMPAKAVPPFAWGDGAPYSAFALDKFLVVAERAMARRHVELDAGMR
                     RMLSAAYERRERAALDGGQG"
     gene            893..1708
                     /locus_tag="VFN38_00675"
     CDS             893..1708
                     /locus_tag="VFN38_00675"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HET9010289.1"
                     /translation="MRLWVLGSGSKGNAVLIECGETRVLVDAGFAPRELAGRLAAVGV
                     APQSIRACVITHEHTDHVKGACAGAAKWGWALHASEGTAEACPALLGADARTFEPGAS
                     LTIGDLELRTVPTPHDATAPVAIVATSSRSGARAGVCYDLGHASDPVKIAMRELDLLV
                     LEANHDEAMLRAGPYPPSVQGRIAGRRGHLSNRAAARLARESASFNLKHVVLAHLSES
                     CNEPALAERTVSDALTGTRFRGKVHVAPQHAAVGPFTPRLTRCAPAPEQLTFF"
     gene            complement(1826..>2075)
                     /locus_tag="VFN38_00680"
     CDS             complement(1826..>2075)
                     /locus_tag="VFN38_00680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TCP-1/cpn60 chaperonin family protein"
                     /protein_id="HET9010290.1"
                     /translation="SIVVAKIRENKSNTYGYNALTDKYEDLVQAGVIDPTKVTRTALQ
                     NAASIAGPLLTTEAIVVEKKEDNKAPAAPGGGGMGGMY"
BASE COUNT          271 a          745 c          764 g          295 t
ORIGIN      
        1 gccagcttcg ccgacggcgc cgccaccctc gacgagctgg cggcctctca gggaagcgac
       61 gcgcgcgcat gcgagatcgg cggctggtgg gccgacgagg tctggcacct gctgcgcgat
      121 ctcggggcgc agctggccga cgacgtcccg ctgctcgccg cgtcgctcga ctgcgaccgc
      181 gcgccgtcca cgacggtgct cggcgcgcag ggcgtgtacg tcgagcgcgg cgcggtgatc
      241 gagccgctcg tcgtgctcga cgcggccgcc ggcccgatcc tcgtccgacg cggcgccgtg
      301 gtgcagtcgt tcacccggct ggtcggcccc tgctacgtcg gggagcaggc cacgatcgtc
      361 ggcgatcggg tctcgggctg ctcgatcggc gaggtagcca aggtgcgcgg cgagatcagc
      421 gcctcgatcg tgctcgggca ctccaacaag ggacacgacg gcttcgtcgg ccactcgtat
      481 ctcgggcggt gggtcaacct cggcgccggc acgacgacga gcaacctgaa gaacacctac
      541 ggtcccgtcg ccctcgtcac gccgagcggc gtgcgcgaca ccgggctgca gttcctcggc
      601 acgctcttcg gcgatcacgc gaagacgggg atcgggctcc gtctgaccac gggcagcgtc
      661 gtcggcgcgg gcgccaatgt ctacgggagc gcgatgccgg ccaaggcggt gccccccttc
      721 gcctgggggg acggcgctcc ctactccgcg ttcgcgctcg acaagtttct cgtcgtcgcc
      781 gagcgcgcga tggcgcggcg ccacgtcgag ctggacgcgg gaatgcgccg catgctgtcg
      841 gcggcctacg agcggcgcga gcgcgccgcg ctggacggcg ggcagggctg agatgaggct
      901 gtgggtgctg ggcagcggca gcaaggggaa cgccgtgctg atcgagtgcg gcgagacgcg
      961 cgtgctggtg gacgcgggct tcgcgccgcg cgagctggcc ggccggctgg cggcggtcgg
     1021 cgtggcgccg cagtcgatcc gggcgtgcgt gatcacgcac gagcacaccg accacgtgaa
     1081 gggggcctgc gccggcgccg cgaagtgggg gtgggcgctc cacgccagcg aggggaccgc
     1141 cgaggcctgc cccgccctgc tcggcgccga cgcgcgcacg ttcgagccgg gcgcgagcct
     1201 gacgatcggc gacctcgagc tccgcaccgt gccgacgccg cacgacgcga cggcgccggt
     1261 ggcgatcgtc gccacctcga gccggtcggg ggcgcgggcg ggggtctgct acgacctcgg
     1321 acacgccagc gacccggtga agatcgccat gcgcgagctc gacctgctgg tcctcgaggc
     1381 gaaccacgac gaggcgatgc tacgcgccgg cccctatccc ccctcggtgc aggggcggat
     1441 cgccggccgt cgcgggcacc tgagcaatcg ggcggcggcc cggctcgcgc gcgagtcggc
     1501 gtcgttcaac ctcaagcacg tcgtgctcgc ccacctgagc gaatcgtgca acgagcccgc
     1561 gctcgccgag cgcacggtga gcgacgcgct caccggcacg cgtttccgcg gcaaggtcca
     1621 cgtcgcgccg cagcacgccg cggtcggccc gttcacgccg cggctgacgc gctgcgcgcc
     1681 ggcgccggag cagctcacct tcttctagaa cggcgcgtcg cgaacgcgga ccgaaaaagg
     1741 ggaaagcgga aagagggaga ccttcccctc tttccgcttt ccccttttcc aacccagggg
     1801 gccaaccctc ggcccccctc gagctctagt acatgccgcc catgccgccg ccgcccggcg
     1861 cggcgggcgc cttgttgtct tccttcttct cgacgacgat cgcttccgtc gtcaggaggg
     1921 ggccggcgat ggacgccgcg ttctgcagcg cggtgcgcgt gaccttcgtc ggatcgatga
     1981 cgcccgcctg gacgaggtcc tcgtacttgt cggtcagcgc gttgtagccg taggtgttgc
     2041 tcttgttctc gcggatcttg gcgacgacga tcgag
//
LOCUS       DASSYW010000042         3490 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_477692, whole genome shotgun sequence.
ACCESSION   DASSYW010000042 DASSYW010000000
VERSION     DASSYW010000042.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3490)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3490)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3490
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_477692"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            67..912
                     /gene="ispD"
                     /locus_tag="VFN38_00685"
     CDS             67..912
                     /gene="ispD"
                     /locus_tag="VFN38_00685"
                     /EC_number="2.7.7.60"
                     /inference="COORDINATES: protein motif:HMM:NF013308.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050518 - 2-C-methyl-D-erythritol
                     4-phosphate cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HET9010291.1"
                     /translation="MSDPRPTGAAGRDPRDPGPPRIAAQDGRAGGAPRLVSSRADADA
                     DADGAAGDVRRDVGVVIVGAGSGSRVRGAELKQFRWVAGKPMLLHSVQAFHARPDVAM
                     VVVVLPKAFAADPPPWLFQCDIDRLLVSVGGRERAESVANGLEDLPEEVEYVLVHDAA
                     RPLVGDDVIDRVIGAARAGEGAIAALPVVDTLKRVDEEGRVVETVDRAGLWRAQTPQG
                     FPRDMIERAHALARRDGVVATDDAALCERLGLPVRVVRGSERALKVTEEGDFVRAEAL
                     ASLAE"
     gene            909..1598
                     /locus_tag="VFN38_00690"
     CDS             909..1598
                     /locus_tag="VFN38_00690"
                     /EC_number="2.7.7.87"
                     /inference="COORDINATES: protein motif:HMM:TIGR00057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0061710 - L-threonylcarbamoyladenylate
                     synthase [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase"
                     /protein_id="HET9010292.1"
                     /translation="MSGHAAGPTSPLAIPFWSPAEIDGSLRGVIAHLHDRGVIAYPTE
                     TVYGFGTAVDAESVEALVRLKGRPAGKPFLILVAGSDMLARLDLHMTPAAANIAARHW
                     PGPVTLVLPGGNGRVSRRLRGPEGGIAVRWTPHPGLTRLIRAYGEPITSTSANRPGVP
                     PATSAYEVTSQWSEEIRRGTLQVLDGGRLTPSPPSTVVDCTGRHPRVIRPGAIGAAEL
                     RVSVPDLVGDV"
     gene            1698..2168
                     /locus_tag="VFN38_00695"
     CDS             1698..2168
                     /locus_tag="VFN38_00695"
                     /inference="COORDINATES: protein motif:HMM:NF013607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight protein arginine
                     phosphatase"
                     /protein_id="HET9010293.1"
                     /translation="MKILFVCTGNTCRSPLAEAIARKAAIERGLLDVEVASAGTSAWD
                     GAGPSDGALLVGMERRLDLSQHRAQQLTAELVAAYDVILAMGPHHLERAEALGGGGKS
                     YLLTDYASGGMSIRPVSDPFGGELELYRTTVDELEEEIRRVFDRITAERAPDVK"
     gene            2176..3048
                     /locus_tag="VFN38_00700"
     CDS             2176..3048
                     /locus_tag="VFN38_00700"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: protein motif:HMM:NF020090.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004764 - shikimate 3-dehydrogenase
                     (NADP+) activity [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HET9010294.1"
                     /translation="MTAAGSAVALPGRLVLLGHPVAHSLSPAFQNAALRRARLPLVYE
                     ALDVPSAALPAMLGELARVHAAGNVTIPHKEAVAARCVRLTPLARRVGAVNTFWHEGP
                     DLVGENTDVGGVDEAVRALLGGPPEGARVALIGAGGSAAAVLAAAEGWGGARVAIWSR
                     SHERSVALAARFPAVAESPEFLAEAIRGADLVVNATPIGLSGDEIPFPPALLRRSAAL
                     LDLVYRRDGPTPWVRLGRAQGRRASDGLPMLIAQGALAFECWFGVSADRAAMWEAIAH
                     VPGGGAPAGSDADG"
     gene            3089..>3490
                     /locus_tag="VFN38_00705"
     CDS             3089..>3490
                     /locus_tag="VFN38_00705"
                     /inference="COORDINATES: protein motif:HMM:NF039185.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="double zinc ribbon domain-containing protein"
                     /protein_id="HET9010295.1"
                     /translation="MRYALRDEFRNGVRAAAGGLLALLLPRYCVACERAMDAAERGVV
                     CGRCWARLEPLAAPRCERCGHPERPRPAFVTAERTCAWCALLPPYVRAVRSACWIGGA
                     GSGAPIVHALKYGGWTGVAGAMADRMTRLGWP"
BASE COUNT          402 a         1274 c         1339 g          475 t
ORIGIN      
        1 tggcacgcgc gacatccagg tcgtcggcgc gaagacgatc cacgagctct tccagcgact
       61 cttcgcgtga gtgatcctcg accgaccggc gcggccgggc gcgacccgcg cgatcccgga
      121 ccgccccgca tcgccgcgca ggacggccgc gccggtggcg cccctcgtct cgtgtcgtcg
      181 cgcgccgacg ccgacgccga cgccgacggc gccgccggcg acgtgcgccg ggacgtcggc
      241 gtggtgatcg tcggcgcggg gagcggatcg cgggtccgcg gagcggagct caagcagttc
      301 cgctgggtgg cggggaagcc gatgttgctg cacagcgtgc aggcctttca cgcgcggccc
      361 gacgtggcga tggtcgtcgt cgtgctgccc aaggcattcg ccgccgatcc gcccccctgg
      421 ctctttcagt gcgacatcga ccgcctgctc gtctcggtgg gggggcgcga gcgcgccgag
      481 tcggtggcga acgggctcga ggacctgccg gaggaggtgg agtacgtgct ggtgcacgac
      541 gccgcgcgtc ccctggtggg ggacgacgtg atcgaccgcg tgatcggcgc cgcgcgcgcc
      601 ggggaggggg ctatcgcagc attgcccgtc gtggacacgt tgaaacgggt ggacgaggag
      661 gggcgagtgg tcgagacggt ggaccgggcg gggctctggc gggcgcagac gccgcagggc
      721 tttccgcgcg acatgatcga gcgcgcgcac gcgctcgccc ggcgagacgg cgtcgtggcg
      781 accgacgacg cggcgctctg cgagcggctc gggctgccgg tgcgcgtggt gcgcggcagc
      841 gagcgcgcgc tcaaggtgac cgaggagggt gatttcgtgc gcgccgaggc ccttgcctcg
      901 ctggccgaat gagcggccac gccgccggtc ccacctcgcc gctggcgatc cccttctggt
      961 cccccgccga gatcgacggc tcgctgcggg gcgtcatcgc gcatctgcac gaccgcggcg
     1021 tgatcgcgta tcccacggaa accgtgtacg gcttcgggac cgcggtggac gccgaatcgg
     1081 tcgaggcgct ggtgcggctc aaggggcggc cggcggggaa gcccttcctg atcctcgtcg
     1141 ccggcagcga catgctcgcc cgcctcgatc tgcacatgac ccccgcggcg gcgaacatcg
     1201 cggcgcgcca ctggcccggt cccgtgacgc tcgtcctgcc gggcggaaat gggcgcgtgt
     1261 cgaggcggct gcgcggtccc gaggggggca tcgccgttcg ctggaccccg caccccgggc
     1321 tcacccggct catccgcgcc tacggcgagc cgatcacgtc cacgagcgcc aatcgtcccg
     1381 gggtcccgcc ggcgacgtcc gcctacgagg tgacgagcca gtggtcggag gagatccggc
     1441 gcgggacgct gcaggtgctg gacggcggcc ggctcactcc ctcgccgcca tcgaccgttg
     1501 tagactgcac cgggaggcac ccgcgggtca tccggccggg cgcgatcggc gccgccgagc
     1561 tcagggtcag cgtgcccgat ctggtcgggg acgtgtgagc tcgttcgggg cgacgggccg
     1621 atgggcgcgc ggccgcgcgc tccagccggc cgactctccc tgccttctcg ctcgagtacc
     1681 tcatgcacag taccgtcatg aagattctgt tcgtctgcac tggcaacacc tgccgtagcc
     1741 ccctcgccga ggcgatcgcg cgaaaggcgg cgatcgagcg cggcctgctc gacgtcgagg
     1801 tggcgagcgc cggcacgagc gcctgggacg gcgcgggccc ctccgacggc gcgctcctcg
     1861 tcggcatgga gcgccggctc gacctctccc agcaccgcgc gcagcagctc accgccgagc
     1921 tggtggccgc gtacgacgtc atcctcgcca tggggccgca ccatctcgag cgcgccgagg
     1981 cgctgggtgg agggggcaag tcgtatctgc tcaccgatta cgcgtccggc ggcatgtcca
     2041 tccgcccggt gagcgatccg ttcggcgggg agctcgagct ctatcgcacg acggtggacg
     2101 agctcgaaga ggagatccgg cgcgtcttcg accgcatcac ggcggagcgc gcgcccgacg
     2161 tgaagtgagc gccgcgtgac cgccgcgggg agcgcggtcg cgctgcccgg ccgactggtg
     2221 ctcctcggcc accccgtcgc tcactcgctc tctcccgcgt tccagaacgc cgcgctgcgg
     2281 cgcgcacggc tgcctctcgt ctacgaagcg ctcgacgtgc cctccgcggc gctgccggcg
     2341 atgctcggcg agctcgcccg ggtgcatgcg gccggcaacg tcacgatccc gcacaaggag
     2401 gctgtcgcgg cgcgctgcgt gcgactcacg ccgctcgccc ggcgggtggg cgccgtcaat
     2461 accttctggc acgaggggcc ggacctcgtc ggcgagaaca ccgacgtggg gggggtggac
     2521 gaggccgtgc gcgccctgct cggcgggccg cccgaggggg cgcgcgtagc cctgatcggc
     2581 gcggggggat cggcggcggc ggtcctcgcg gcggccgagg ggtggggggg cgcacgggtc
     2641 gcgatctgga gccggagcca cgagcggagc gtggcgctgg cggcgcgctt tccggcggtc
     2701 gccgagtcgc ccgagttcct cgccgaggcg atccgcgggg ccgacctcgt cgtcaacgcc
     2761 acgcccatcg gcctctccgg cgacgagatc ccctttcctc ccgcgctgct gcgccggagc
     2821 gccgccctcc tcgacctcgt ctaccggcgc gacggtccga ccccctgggt gcggctcggc
     2881 cgcgcgcagg gacggcgggc gtccgacggg cttccgatgc tgatcgcgca gggcgcgctc
     2941 gccttcgagt gctggttcgg cgtcagcgcc gaccgggcgg cgatgtggga ggccatcgcc
     3001 cacgtcccgg ggggcggcgc tccggcgggg agcgatgccg acggctgagc cgccggccgc
     3061 gcggcggcgc gacgccttac tcgacgcctt gcgctacgcc ctacgcgacg agttccgcaa
     3121 cggcgtgcgc gctgccgccg gcggactgct cgccctcctc ctgccgcgct actgcgtggc
     3181 ctgcgagcgc gcgatggacg ccgccgagcg gggggtggtc tgcgggcgat gctgggcgcg
     3241 gctcgaaccg ctggccgcgc cgcgctgcga gcgctgcgga catcccgagc gcccccggcc
     3301 ggccttcgtc accgccgagc gtacgtgcgc ctggtgcgcg ctcctgcctc cctacgtgcg
     3361 ggccgtccgc tcggcgtgct ggatcggggg cgcgggcagc ggcgcgccga tcgtccacgc
     3421 gctgaagtac gggggctgga cgggggtcgc cggcgccatg gccgaccgca tgacgcgact
     3481 cggctggccc
//
LOCUS       DASSYW010000043         2059 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1067454, whole genome shotgun sequence.
ACCESSION   DASSYW010000043 DASSYW010000000
VERSION     DASSYW010000043.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2059
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1067454"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(70..381)
                     /locus_tag="VFN38_00710"
     CDS             complement(70..381)
                     /locus_tag="VFN38_00710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010296.1"
                     /translation="MDDVMNRMARELSDAIAAAVAEDPRVEACRERVRAAGYEMRVSL
                     EAVIGFVNRTTPGALAKIGAPQKAVRGGERRNIEMSANDRRFLRSLRIAADETQEKEV
                     E"
     gene            681..>2059
                     /locus_tag="VFN38_00715"
     CDS             681..>2059
                     /locus_tag="VFN38_00715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016866 - intramolecular transferase
                     activity [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase family protein"
                     /protein_id="HET9010297.1"
                     /translation="MTMQNPGPQSLEGWDPSVDLGFPGAFPYTRGIQPTMYRGRLWTM
                     RQYAGFGTAAESNQRYRYLLANGVTGLSVAFDLPTQMGYDSDHALAAGEVGRVGVAID
                     SIEDMIELLDGIPLDRVSTSMTINATAIILLALYAAAARRAGVPLSALAGTIQNDILK
                     EYVARGTYIYPPRPSLRIVTDVFAFCEREMPNWNTISISGYHIREAGSTAIEEVAFTF
                     ANAIAYVDAAVAAGLNVDRFGQRLSFFFNAHNDFLEEVAKFRAARRLWARIMRERFGA
                     QNPRAEQLRFHTQTAGSTLTAQQPDNNIVRVAVQALAAVLGGTQSLHCNGRDEALALP
                     TEDAARIALRTQQIIAAETGVANTVDPLGGSYAVEALTNDIEAGARALLDRVDTAGGT
                     LAAIEQGIIQRAIQESAYRAQQDVDAGRSTVVGVNAFRDDEGPAPGRTAAQIEVHRID
                     PEVERRQVER"
BASE COUNT          331 a          708 c          694 g          326 t
ORIGIN      
        1 agttgacaag agaaaggccc gcgcggctga tgccgcgcgg gcctctgtcg tctcacgatg
       61 ggccggccgt tactcgacct ctttctcctg ggtctcgtcg gcggcgatgc gcagcgaccg
      121 gaggaagcgg cggtcgttcg cgctcatctc gatgttgcgg cgctcgccgc cgcggacggc
      181 cttctgcggg gcgccgatct tggcgagggc gccgggcgtc gtgcggttca cgaacccgat
      241 caccgcttcg agcgacacgc gcatctcgta accggcggcg cgcacgcgct cgcggcaggc
      301 ctcgacgcgc ggatcctcgg ctacggcggc agcgatggcg tcggacagct cccgtgccat
      361 ccgattcatg acgtcatcca ttctggacct cctcaccgcc gccggaactg ggcacccggg
      421 gcgtctcccg atccacgctc gctccggcct ggcctgaacc tcgaccggag ccgaaactgc
      481 cgcccgggga gggcgccagg gatcggccga caaatttgtt catatgaagg atttgcagcg
      541 tgggaacgcg cttcctattc taagcatgcc cctgtcgagt gtcaatccat aacccgcaac
      601 atgttgtggt gtgaagcacc gtgaaccgct agagaggttg gtagaatgct ctcgatcgcg
      661 cctcttccgg tcacgcactc atgacgatgc agaacccagg tccgcagtcg ctcgaaggct
      721 gggacccctc ggtcgatctc ggctttccgg gcgcgttccc ctacacccgc ggcattcagc
      781 cgacgatgta ccgggggcgg ctgtggacga tgcggcagta cgccgggttc gggaccgcgg
      841 cggagtcgaa tcagcgctac cgttacctgc tcgcgaatgg cgtgaccggt ctgagcgtcg
      901 ccttcgatct gccgacgcag atgggctacg actccgatca tgcgctcgct gccggcgagg
      961 tcggccgcgt cggcgtcgcc atcgactcga tcgaggacat gatcgagctc ctcgacggca
     1021 tcccgctcga tcgcgtctcg acgtcgatga cgatcaacgc gacggcaatc attctgctgg
     1081 cgctctacgc agcggccgcg cggcgggcgg gcgtcccgct ctcggcgctc gcgggcacga
     1141 ttcagaacga catcctcaag gagtacgtcg cgcgcgggac gtacatctac ccgccgcgac
     1201 cgtcccttcg catcgtcacc gacgtcttcg cgttctgcga gcgcgagatg ccgaactgga
     1261 acacgatctc gatcagcggc taccacatcc gcgaggccgg atcgacggcg attgaggaag
     1321 tcgcgttcac gttcgccaac gccatcgcct acgtcgacgc ggcagtggcc gccgggctga
     1381 atgtcgaccg cttcggtcag cggctctcgt tcttcttcaa cgcccacaac gattttctcg
     1441 aggaggtcgc gaagttccgt gcggcgcggc ggctgtgggc gcgcatcatg cgcgagcgct
     1501 tcggcgcgca gaacccgcgc gccgagcagc tcaggttcca cacgcagacg gcgggcagca
     1561 ccctcaccgc gcagcagccc gacaacaaca tcgtccgcgt cgccgtgcag gccctcgcgg
     1621 cggtgctggg cggcacgcag tcgctccact gcaacgggcg cgacgaggcg ctggcgctcc
     1681 cgaccgagga cgcggcgcgg atcgcgctgc ggacgcagca gatcatcgcc gccgagacgg
     1741 gcgtcgccaa caccgtcgat cccctgggcg ggtcgtatgc ggtcgaggcg ctgaccaacg
     1801 acatcgaagc gggcgcgcgc gcgctgctcg atcgcgtcga cacggcaggc gggacgctcg
     1861 cggccatcga gcaaggcatc atccagcggg cgatccagga gtcggcgtac cgcgcgcagc
     1921 aggacgtcga cgccgggcgg agcaccgtgg tcggcgtcaa tgcgtttcgc gacgacgaag
     1981 gaccggcacc gggccgcacg gcggcgcaga tcgaggtgca tcggatcgat ccggaagtcg
     2041 agcgccggca ggtggagcg
//
LOCUS       DASSYW010000044         5566 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1141222, whole genome shotgun sequence.
ACCESSION   DASSYW010000044 DASSYW010000000
VERSION     DASSYW010000044.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 5566)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5566)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5566
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1141222"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1059)
                     /locus_tag="VFN38_00720"
     CDS             complement(<1..1059)
                     /locus_tag="VFN38_00720"
                     /inference="COORDINATES: protein motif:HMM:NF014589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyltransferase N-terminal
                     domain-containing protein"
                     /protein_id="HET9010298.1"
                     /translation="MTSILGISAFYHDSAAALVVDGRIVAAAQEERFTRRKGDSRLPT
                     NAAAYCLHEAGLRAADVDYVAFYEKPITKFGRLLESYLSVAPRGVTSWQAAMSTWLKE
                     RLWQEDTVRRELGIADATPLLFPRHHESHAASAFFPSPYQSAAILTIDGVGEWSTTTV
                     GRGEGARLELQHELRFPHSLGLLYSAFTYYTGFKINSGEYKVMGLAPYGEPRYVQAIL
                     DHVAEIREDGSLHLNLEYFNFLEGLTMTSEKFHALFGGPPRQPESKLTQREMDLARSI
                     QDVVELAMLRMARHAYDVSGGEKQLCMAGGVALNCVGNGRILREGPFESIWIQPAAGD
                     AGGAVGAALAGCHLFAGQP"
     gene            complement(1063..1218)
                     /locus_tag="VFN38_00725"
     CDS             complement(1063..1218)
                     /locus_tag="VFN38_00725"
                     /inference="COORDINATES: protein motif:HMM:NF039953.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5989 family protein"
                     /protein_id="HET9010299.1"
                     /translation="MRRLLSELGRFILTQKKFWLIPVLLVLVLMLVLVILSAKGGVLA
                     PFIYPLF"
     gene            complement(1244..1723)
                     /locus_tag="VFN38_00730"
     CDS             complement(1244..1723)
                     /locus_tag="VFN38_00730"
                     /inference="COORDINATES: protein motif:HMM:NF039992.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SxtJ family membrane protein"
                     /protein_id="HET9010300.1"
                     /translation="MSEHLDVSPLIRGDRWATSVTPPARKPPSMRVFGLVMLVACGVF
                     ATLSWLTYRRSGAEWRAGFAVLLALAGTVLFVWSLVAPTSLQPVYRGWMAFGQRLGAI
                     VSGALLAVVYYLVVTPVGWLMRATGTDPLSRVARGAGESYWVPHPARPERDDYTHLS"
     gene            complement(1693..2892)
                     /locus_tag="VFN38_00735"
     CDS             complement(1693..2892)
                     /locus_tag="VFN38_00735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010301.1"
                     /translation="MPTQGRLRTVMFAIISMAFGVVLCLLVAEVMCRVLPVNTGLMSQ
                     PVDDANPVLRFAPDRAFTYSRGWNFADVNRGTTNGDGWVSPVQYDSTARSPLLAVVGD
                     SYVEAAMVPAESTLTRRLARLAEGRGRVYSFGASGAPLSQYLMEAQYARDHYHPTALA
                     VVVVGNDFDESLMKYKSAPGFHYFADDGRGGLVLRRVDQSVSLGRRLARHSALAYYLL
                     LNLHAQETIASLRASGRGAPATQYVGNTAADAGASRVADSQRAVDAFLAELPVRAGLP
                     SSRIVLVVDAIRAAVYSPAVAREVAGSYFDVMRRYLATAARARGFEVVDLQPAFAARF
                     ASSRQRFEVSSGDDHWGARGHEVAADAIAGSGFLASVFSASAPCDSIHPPHALPTPCP
                     STSTSPR"
     gene            complement(2897..4825)
                     /gene="asnB"
                     /locus_tag="VFN38_00740"
     CDS             complement(2897..4825)
                     /gene="asnB"
                     /locus_tag="VFN38_00740"
                     /EC_number="6.3.5.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR01536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004066 - asparagine synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006529 - asparagine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase (glutamine-hydrolyzing)"
                     /protein_id="HET9010302.1"
                     /translation="MCGIAGFVDLRRQPLAAAEQRLERMNQLIAHRGPDGRGSWLDAR
                     RSIGLTHRRLSIIDLDTGQQPMIDPESGCVIVYNGEIYNFVEKREELGRSTFRTTSDT
                     EVILRAWLRWGPRCVEHLRGMFAFAIWDPRTDTLFCARDRFGIKPFYLAEVGSTLYFA
                     SEAKALLPFLPECRTDAQGLGDYLAFQLCLDGKTLFEGVRELLPGHTLTVANGATRVE
                     RYWEVYYELDFSHRAEWFESRLRELLDESAALHLRADVPLGAYISGGIDSSLVATMAA
                     AHHPNLIGFTGKFSIGPEYDESPYARMVASHAGVPLHEVDITADDFMREIGRVIYHLD
                     YPVAGPGAFPQFMVSELAARHRKVVLGGQGGDEVFGGYTRYLIAYFEQCVKAAIDGTS
                     HNGNFVVTYESIIPNLSALRNYKPMLQEFWRDGLFESMDRRYFRLINRAPHLGDAIRW
                     DALRSYSPFESFARIFNGDNVQKESYFDRMTHFDFKTLLPALLQVEDRVSMAHGLEAR
                     VPLLDHPLVEFAATIPADIKFTNGQLKRTLTDIARSVLPEPVVNRKDKMGFPTPFTEW
                     ARGPARGFVNDLFTSRAAQTREFVDNRRVLDLMERDGRFGRNLWALFCLELWQQTFHD
                     QHRPFTADAGVPALSAVS"
     gene            complement(4835..>5566)
                     /locus_tag="VFN38_00745"
     CDS             complement(4835..>5566)
                     /locus_tag="VFN38_00745"
                     /EC_number="5.1.3.14"
                     /inference="COORDINATES: protein motif:HMM:NF014411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008761 - UDP-N-acetylglucosamine
                     2-epimerase activity [Evidence IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetyl glucosamine 2-epimerase"
                     /protein_id="HET9010303.1"
                     /translation="PVAHVEAGLRSFNRRMPEEVNRVLTDHVSTWLFAPSKASAELLA
                     REGLTRGVHVVGDIMRDAVDEHLPRARARAGVLDRLSLTPRRFVAATIHRAENTDDRG
                     RLASLVEALGALDQPVVLPLHPRTAGRLSEFGIAVPASVSVVDPLGYLDMLALLASAA
                     CIATDSGGLQKEAFYAGTPCVTLRTETEWTETVAAGWNMLCEPTPGALRAAVAHMTSP
                     RPAAPSLYGDGRTAERITELLLSSF"
BASE COUNT          919 a         1930 c         1946 g          771 t
ORIGIN      
        1 cggctggccg gcgaacaggt ggcagccggc gagcgccgcg ccgaccgccc ccccagcgtc
       61 gcccgccgcc ggctggatcc agatcgactc gaagggcccc tcgcggagga tgcggccgtt
      121 ccccacgcag ttgagcgcca cgccacccgc catgcagagc tgcttctcgc cgccgctcac
      181 gtcgtacgcg tgccgcgcca tgcgcagcat ggccagctcc accacgtcct ggatcgatcg
      241 cgccaggtcc atctcgcgct gcgtcagctt cgactccggc tggcgcggcg gaccgccgaa
      301 gagcgcatga aacttctcgg aggtcatggt cagcccctcg aggaagttga agtactcgag
      361 gttcagatgc agcgagccgt cctcacggat ctcggcgacg tgatcgagga tcgcctgcac
      421 gtaacgcggc tcgccgtagg gggcgagccc catgaccttg tactcgcccg agttgatctt
      481 gaacccggtg tagtacgtga aggccgagta cagcagcccg agcgagtgcg gaaagcgcag
      541 ctcgtgctga agctccagcc gggcgccctc cccgcggccg acggtcgtcg tcgaccattc
      601 gccgacgccg tcgatcgtga ggatcgccgc cgactggtag ggcgacggaa agaaggcact
      661 cgccgcgtgc gactcgtggt gccgggggaa gagcagcggc gtcgcgtccg cgatgcccag
      721 ctcgcggcgc accgtgtcct cctgccagag ccgttccttc aaccaggtcg acatcgccgc
      781 ctgccagctg gtgacgcccc gcggcgcgac ggagaggtag ctctccagca ggcggccgaa
      841 cttcgtgatc ggcttctcgt agaaggccac gtagtcgacg tcggctgcac gcagcccggc
      901 ttcgtgcagg caatacgccg ccgcgttcgt cggcagccgg gaatcgccct tccgccgcgt
      961 gaagcgctcc tcctgcgccg ccgccacgat ccgcccgtcc acgacgagcg ccgcggccga
     1021 gtcgtgatag aaggccgaga tcccgaggat ggacgtcatc gctcagaaca gcggatagat
     1081 gaatggcgcg agcacgccac ccttcgccga caggatcacg agcaccagca tcagcaccag
     1141 cacgagaagc acggggatga gccagaactt cttctgggtg aggatgaagc ggccgagctc
     1201 cgacagcaga cgtcgcatga gtatccgagg ggtgacagtg cggtcaggac aggtgggtgt
     1261 agtcgtctcg ctccggacgc gccggatgcg gcacccagta cgactcgccc gcgccgcgcg
     1321 cgacgcgact cagcgggtcc gtgccggtgg cgcgcatcag ccagccgacg ggcgtgacca
     1381 cgaggtagta gacgacggcg agcagcgccc cgctgacgat cgcgccgagt cgctggccga
     1441 acgccatcca tccgcggtac acgggctgca ggctggtcgg ggccacgagc gaccagacga
     1501 agaggacggt gcccgcgagc gcgagcagca ccgcgaaccc cgcgcgccac tcggcgccgc
     1561 tgcgccggta cgtcagccag ctcagcgtgg cgaacacccc gcacgcgacc agcatcacga
     1621 ggccgaagac gcgcatcgag gggggtttgc gggccggcgg cgtgacgctg gtggcccacc
     1681 gatcgccgcg gatcagcggg gagacgtcga ggtgctcgga cacggagtgg ggagagcgtg
     1741 tggtggatga atcgagtcgc acggtgccga ggcggagaac accgacgcga ggaatccgga
     1801 gccggcgatc gcgtcggccg cgacctcgtg gccacgtgcg ccccagtggt catcgcccga
     1861 ggagacctcg aaccgctggc ggctgctggc gaaccgggcc gcgaacgccg gctggaggtc
     1921 gacgacctcg aatccccgcg cgcgagccgc cgtcgcgagg tatcggcgca tcacatcaaa
     1981 gtagctgccg gccacttcgc gcgcgacggc gggcgagtag acggccgccc ggatcgcgtc
     2041 gacgacgagg acgatccgcg acgacgggag cccggcccgg acgggcagct cggcgaggaa
     2101 cgcgtcgacg gcgcgctgcg agtcggccac gcgcgacgcc ccggcgtcgg ccgccgtgtt
     2161 gccgacgtac tgcgtcgcgg gcgctccgcg ccccgacgcg cggagagacg cgatcgtctc
     2221 ctgcgcgtgc aggttgagca gcaggtagta ggcgagcgcg gagtgccgcg cgaggcgacg
     2281 cccgagggac accgactgat ccacacggcg cagcacgagg ccgccgcgtc cgtcgtccgc
     2341 gaagtagtgg aagcccggcg cggacttgta cttcatcagg ctttcgtcga agtcgttgcc
     2401 gaccacgacc accgcgagcg ccgtcggatg gtagtggtcc cgcgcgtact gcgcctccat
     2461 caggtactga ctcagcggcg ctccggatgc gccgaagctg tacacgcgtc cccgcccctc
     2521 ggccaggcgc gcgagtcgcc gggtgagcgt cgactcggcc gggaccatcg cggcctccac
     2581 gtagctgtca ccgaccacgg ccagcagcgg cgagcgagcg gtcgagtcgt actggacggg
     2641 actgacccac ccatcgccgt tcgtcgtccc gcgattcacg tcggcgaagt tccagccgcg
     2701 cgagtaggtg aacgcgcggt ccggcgcgaa gcggagcacc gggttggcgt cgtcgaccgg
     2761 ttgcgacatc agcccggtgt tcaccggcag cacgcggcac atcacctcgg ccacgagcag
     2821 gcagagcacg accccgaacg ccatcgagat gatggcgaac atcacggtgc gcaggcgccc
     2881 ctgggtcggc acgcgctcag ctcaccgcgc tgagcgcggg aacgccggcg tcggcggtga
     2941 acggccggtg ctggtcgtga aaggtctgct gccacagctc gaggcagaac agcgcccaga
     3001 ggttgcggcc gaaccgtccg tcgcgctcca tgagatcgag cacgcgccgg ttgtccacga
     3061 actcgcgcgt ctgcgccgcg cggctggtga acaggtcgtt cacgaagccc cgggccggcc
     3121 cccgcgccca ttcggtgaag ggcgtgggga accccatctt gtccttgcgg ttcaccaccg
     3181 gctccggcag caccgagcgc gcgatgtcgg tcagcgtgcg cttgagctgc ccgttcgtga
     3241 acttgatgtc ggccgggatg gtggcggcga actccacgag cggatgatcc agcagcggca
     3301 cgcgcgcctc gagcccgtgc gccatcgaca cgcgatcctc gacctgcagc agcgccggca
     3361 gcagcgtctt gaagtcgaag tgggtcatgc gatcgaagta cgattccttc tgcacgttgt
     3421 cgccgttgaa gatgcgggcg aacgactcga agggagagta cgaccgcagc gcatcccagc
     3481 ggatcgcgtc gccgaggtgg ggtgcccggt tgatcagccg gaaatagcgg cgatccatcg
     3541 actcgaacag gccgtcccgc cagaactcct gcagcatcgg cttgtagttg cgcagcgccg
     3601 acaggttcgg gatgatcgac tcgtacgtga cgacgaagtt gccgttgtgc gacgtgccgt
     3661 cgatcgccgc cttcacgcac tgctcgaagt acgcgatgag atagcgcgtg tagccgccga
     3721 acacctcgtc gcccccctgc ccgcccagca cgaccttgcg gtggcgcgcc gccagctccg
     3781 acaccatgaa ctgggggaac gcccccgggc cggcgaccgg ataatcgagg tggtagatga
     3841 cccggccgat ctcccgcatg aagtcgtcgg ccgtgatgtc cacctcgtgc agcggcacgc
     3901 cggcgtggct cgcgaccatg cgcgcatagg gactctcgtc gtattcgggg ccgatgctga
     3961 acttgcccgt gaagccgatg aggttcgggt ggtgcgccgc cgccatcgtc gcgacgaggc
     4021 tggagtcgat gccgccgctg atgtaggcgc cgagcggcac gtcggcgcgc aggtgcagcg
     4081 ccgccgactc gtcgagcagc tcgcgcagcc gggactcgaa ccattcggcc cgatgcgaga
     4141 agtcgagctc gtagtacacc tcccagtagc gctccacgcg cgtcgcgccg ttcgcgacgg
     4201 tgagcgtatg tccgggcagg agctcgcgca cgccctcgaa cagcgtcttt ccgtcgagac
     4261 agagctggaa ggcgaggtag tcgcccagcc cctgcgcgtc ggtgcggcac tcggggagaa
     4321 agggcagcag cgccttcgcc tcggacgcga agtagagcgt gctccccacc tcggcgaggt
     4381 agaacggctt gatcccgaac cggtcgcgcg cgcagaacag cgtgtcggtg cgcgggtccc
     4441 agatcgcgaa ggcgaacatg ccgcggagat gctccacgca ccgcggtccc catcgcagcc
     4501 aggcgcgaag gatcacctcc gtgtcggagg tggtgcggaa ggtcgagcgg cccagctcct
     4561 cgcgcttctc gacgaagttg tagatctcgc cgttgtacac gatgacgcac cccgactcgg
     4621 gatcgatcat cggctgctgg ccggtatcga ggtcgatgat gctcagccgg cggtgcgtca
     4681 gcccgatgct gcggcgcgcg tcgagccagc tgccccgccc gtcgggtccc cgatgggcga
     4741 tcagctggtt catgcgctcc agccgctgtt cggcggccgc cagcggctga cggcgaagat
     4801 caacgaatcc ggcgatgccg cacatcagga ctcctcagaa ggacgacaac agtagttcgg
     4861 tgatgcgctc ggcggtacgc ccgtcgccat agagtgacgg tgccgcgggt ctcggcgacg
     4921 tcatgtgcgc caccgcggcg cggagcgcgc cgggcgtcgg ctcgcagagc atgttccagc
     4981 cggcggcgac ggtctccgtc cactccgtct ccgtgcgcag cgtgacgcac ggcgtcccgg
     5041 cgtagaacgc ttccttctgg aggccgcccg aatcggtcgc gatgcacgcg gccgaggcca
     5101 gcagcgccag catgtcaaga tagccgagcg ggtccacgac cgaaaccgag gccggcacgg
     5161 cgatcccgaa ctcgctcagc cggccggccg tgcggggatg cagcggcagc accaccggct
     5221 ggtccagcgc gcccagcgcc tcgacgagcg acgccaagcg cccacgatcg tcggtgttct
     5281 cggcacggtg gatcgtggcg gccacgaacc ggcgcggtgt cagcgagagc cggtcgagca
     5341 ccccggcacg ggcccgggcc cgcggcagat gctcgtccac cgcgtcgcgc atgatgtcgc
     5401 ccacgacgtg cacgccccgc gtcagcccct cgcgcgcgag cagctcggcc gacgcctttg
     5461 acggcgcgaa gagccaggtg ctcacgtggt cggtgagcac gcgattgact tcctcgggca
     5521 tgcggcgatt gaagctgcgc agccccgctt ccacgtgggc caccgg
//
LOCUS       DASSYW010000045         2384 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_17459, whole genome shotgun sequence.
ACCESSION   DASSYW010000045 DASSYW010000000
VERSION     DASSYW010000045.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2384)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2384)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2384
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_17459"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2108
                     /locus_tag="VFN38_00750"
     CDS             <1..2108
                     /locus_tag="VFN38_00750"
                     /inference="COORDINATES: protein motif:HMM:NF017569.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="BatA domain-containing protein"
                     /protein_id="HET9010304.1"
                     /translation="ALVPRRAARTEPGALMRFLVPAFLAGLAALMVPVLLHLRRRDRD
                     TPHRFPSLLFLEQLPIRTADRRRITDWPLLLLRALALVLLVAAFARPFVAAPGVTDAG
                     AATRTVVVLLDRSLSMSHRDVWPAALDSVRGVVNGLRPGDRAALVLFDDEAEVVQPLT
                     DDPALLRAALAKARAGAGGTRYAAALRAARQLAAGDGGEQVEVVVVTDLQRGGLSGVA
                     GLELPRSFAVRVAAVAARDRANARVGAVDARRGVRDGRGIVAIRSRVESRGAPASRRM
                     SAMLRLNGRPSGTVLVDVPATGEAPIVFDAVPLPRGLVSGEITIDPDALRGDDTAHFA
                     FSPDDALRVLLATRDDEDAGETMYLERALAVGGPTAVRLERRRASRLDAQALDSAALV
                     ILWDAPVPDDDAGSALTDWVRRGGGLAIVAGRRLGGRAGSTSLVPASVAGRADRAEGQ
                     GGALGDVRIDHPLLLPFRDARAALQVPRFLRYSRLEPAARSEVVARFDDGAAAVVERR
                     EGAGRIVMVAVPLDARAGDFPLQPAYLPFVNRLVVYTAGREATSLARTIGERWLRPGA
                     LHEPVVSTPNGSILRPARDVRGATVPLREAGVYSLHDGTVRGAPLRLLAVNAPAAESD
                     LTPITPAELLAGTTRSTAAAASAQPASPDAAERRQSLWRLLLGALALVLVMEMIFANR
                     GWRGSASRLTLAPSERSRP"
     gene            2105..>2384
                     /locus_tag="VFN38_00755"
     CDS             2105..>2384
                     /locus_tag="VFN38_00755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010305.1"
                     /translation="MTPAHPLTRSLSTLRRQWRTRVALEAAVWIVAAALLAAVAGHVV
                     TSAFGTSATTVLVARLIGYSLVAAAAGFFLALPLVRRTSDQRFALYVEE"
BASE COUNT          235 a          961 c          862 g          326 t
ORIGIN      
        1 ctgcactcgt acctcgacgc gcggctcgca cggagccggg tgcgctgatg cgcttcctcg
       61 tccccgcctt cctcgccggc ctcgcggcgc tgatggtgcc ggtgctgctg cacctgcggc
      121 gccgcgaccg ggacacgccg catcggttcc cgtcgctgct gttcctggag cagctgccca
      181 tccgcaccgc cgaccggcgg cggatcaccg actggccgct gctgctcctg cgggcgctcg
      241 cgctcgtgct gctcgtggcc gccttcgcgc ggccgttcgt ggccgcgccc ggcgtgacgg
      301 atgccggggc cgcgacgcgc acggtggtcg tgctgctcga ccgctcgctc agcatgagcc
      361 atcgcgacgt gtggcccgcc gcactcgact cggtgcgcgg cgtcgtgaac gggctgcgac
      421 ccggcgaccg tgcggcgctc gtgctgttcg acgacgaagc ggaggtcgtg cagcccctca
      481 ccgacgatcc ggccctcctg cgcgccgcgc tcgcgaaggc ccgggccggt gccggcggta
      541 cccgctatgc ggcggcgttg cgcgcggccc gccagctcgc cgccggcgac ggaggggagc
      601 aggtggaggt cgtcgtcgtc accgatctcc agcggggcgg gctgtcgggg gtggccggcc
      661 tcgagctgcc gcgcagcttc gccgtgcgcg tcgcggcagt ggccgcccgc gaccgcgcca
      721 acgcgcgcgt gggcgcggtg gacgcgcgcc gcggcgtgcg ggacgggcgc gggatcgtcg
      781 ccatccgcag ccgcgtcgag tcgcgcggcg ctcccgcctc gcggcggatg agcgcgatgc
      841 tgcggctcaa cggacgcccg agcggcaccg tgctggtgga cgtgccggcc acgggggagg
      901 ctcccatcgt gttcgacgcg gtgcccctcc cccgcggcct cgtgagcggc gagatcacca
      961 tcgatcccga cgccctgcgg ggcgacgaca ccgcgcactt cgccttctct cccgacgacg
     1021 cgctgcgcgt gctgctcgcg acgcgcgacg acgaggacgc cggcgagacg atgtatctcg
     1081 agcgggcgct cgcggtcggc ggcccgacgg ccgtgcggct ggagcgccgg cgcgccagtc
     1141 gcctggacgc gcaggcgctc gacagcgccg cgctcgtgat actgtgggac gccccggtcc
     1201 ccgacgatga cgccggctcg gcgctcacgg actgggtgcg ccgcggaggg ggcctcgcga
     1261 tcgtcgccgg ccggcggctc ggcgggcgcg ccggctccac atcgctcgtc ccggccagcg
     1321 tcgccggccg cgccgaccgc gccgagggcc agggcggcgc gctcggcgac gtgcgcatcg
     1381 atcatcccct gctcctcccc ttccgtgacg cgcgcgccgc gctccaggtg ccgcgcttcc
     1441 tgcgctactc gcggctcgag cccgcggcgc gcagcgaggt ggtcgcgcgg ttcgacgacg
     1501 gcgccgccgc cgtcgtcgag cggcgggagg gtgcggggcg gatcgtcatg gtcgccgtcc
     1561 cgctcgacgc gcgcgccggc gacttccccc tccagcctgc atacctcccc ttcgtgaacc
     1621 ggctggtcgt ctacaccgcc ggccgcgagg ccacttcgct cgctcgcacc atcggagagc
     1681 gctggctccg tcccggggcg ctgcacgagc ccgtggtgtc cactcccaac ggctccatcc
     1741 tgcggcccgc ccgcgacgtg cgaggcgcga ccgtccctct gcgcgaggcc ggcgtgtact
     1801 cgctccacga cggcacggtg cgcggtgcgc cgctccggct cctggccgtc aacgcacccg
     1861 ccgccgagtc cgacctcacg cccatcaccc ccgccgagct gctcgccggc accacccgga
     1921 gcaccgcggc ggcggcgagc gcccagcccg cgtcacccga cgccgccgaa cggcgccaga
     1981 gcctctggcg gctgctcctg ggcgccctgg cgctggtgct ggtgatggag atgatcttcg
     2041 cgaaccgcgg ctggcgcggc agcgccagcc ggctcacgct ggcaccatcc gaacggagcc
     2101 gcccatgacc ccggcacatc cgctcacccg ttcgctctcc accctgcgcc gtcagtggcg
     2161 cacccgcgtc gccctggagg ccgcggtgtg gatcgtcgcc gcggcgctgc ttgcggcggt
     2221 cgccggccac gtcgtcacct cggcgttcgg cacgagcgcc accaccgtgc tcgtcgcgcg
     2281 cctgatcggc tactccctcg tcgccgccgc ggccggattc ttcctcgcgc tgcccctcgt
     2341 ccggcgcacg agcgaccagc gcttcgccct gtacgtggag gagc
//
LOCUS       DASSYW010000046         7311 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1343670, whole genome shotgun sequence.
ACCESSION   DASSYW010000046 DASSYW010000000
VERSION     DASSYW010000046.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 7311)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7311)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7311
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1343670"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1333)
                     /gene="dacB"
                     /locus_tag="VFN38_00760"
     CDS             complement(<1..1333)
                     /gene="dacB"
                     /locus_tag="VFN38_00760"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: protein motif:HMM:NF014200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004175 - endopeptidase activity [Evidence
                     IEA];
                     GO_function: GO:0009002 - serine-type D-Ala-D-Ala
                     carboxypeptidase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine
                     carboxypeptidase/D-alanyl-D-alanine-endopeptidase"
                     /protein_id="HET9010306.1"
                     /translation="MHRIVFRPNAPRVTATVALAVLLLAPAGDVGSLVRPDSGREASI
                     GAVGSAGAQSRTRRARTKRPTTRRVRATRPAAPPPVSWTSPRGAAELAGDFASMIDNR
                     IRGGKFGVMVVSLTRGDTLFAHGAGDMMQPASTMKLYSTAAALDRFGPEHTFSTDVLR
                     DSASAPGGEVSGNLYLRGDGDPSMSSRFWKDANLPMNTLARAIAAAGVKRVKGDLIYD
                     ASAFDDQKIPDGWKTKYLGAAYAARVSALSLNENLVWVVVRPEGGTARVELEPATSTI
                     PLTSNVRVVRGRGGRIVARQSGDGIVVSGSVGASSGPLRYSLVVPDPALFTAGALHAA
                     LRNAGVTVDGAVKPGKTPGNAVKVAGFASPPLSQIISEMNRESINVVAELLYRDAARA
                     IAPGGMSSADAGLANIREFLSKKVGADPTRINVADGSGLSTLDSLTPRNMIH"
     gene            complement(1371..2645)
                     /locus_tag="VFN38_00765"
     CDS             complement(1371..2645)
                     /locus_tag="VFN38_00765"
                     /inference="COORDINATES: protein motif:HMM:NF027716.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5009 domain-containing protein"
                     /protein_id="HET9010307.1"
                     /translation="MAITLSNHPRTTDLRPGDLAPQPAPARERLLSLDVFRGITVAGM
                     LLVNDPGSWGSIYPPLEHAAWNGWTPTDLVFPFFLFIAGITTYLSLSSRRARGDDERA
                     IRAQIIRRGVLIFLFGFLVNGFPYFTWGEVAGIADPTLLQRIADRLPHWRFMGVLQRI
                     GIAYMVAALLTQRTNLRQQAAIIATLLLGYWIVMTALPVPGEGTIGALLLNDPQRTMA
                     AWTDRLFLDWSRWGLGNHLWVSGVTWDPEGILSTVPAICTAMLGNMTGRWIAERRPLS
                     ERLAGMSAAGSIAMMVGLMWHWVFPINKSLWTSSYVVFTAGMAALSLATIMWIVDFQK
                     VRGWTKFFVIYGVNPIIAFIGSGVMARLIYSIIKVDSGGRRIPLQAWLYQTFFASWLS
                     PLNASLAFALAFVLFWYGILYLLYRRNIILKV"
     gene            2891..3379
                     /locus_tag="VFN38_00770"
     CDS             2891..3379
                     /locus_tag="VFN38_00770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010308.1"
                     /translation="MKHTIMRDGIVAGLLGATAVALWFLGLDSLYAHPLATPEALGRG
                     LLRVFGPPGNEGPLTFVVGYTIFHYFAFIVAGVLLAVIVHWARSQPTVLAGAMMLFVA
                     FEIGFYGLSSALQESPFLGALGWAQVATGNLIAALVMGGYMWRAHPELKEEFSYALGG
                     RE"
     gene            complement(3520..4371)
                     /locus_tag="VFN38_00775"
     CDS             complement(3520..4371)
                     /locus_tag="VFN38_00775"
                     /inference="COORDINATES: protein motif:HMM:NF021214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase assembly protein"
                     /protein_id="HET9010309.1"
                     /translation="MHPPVALLLHPAARIALTEFTVHWSTVLGLAGLGALYHWRAGHA
                     PAGPRPTPTTAQRATFFSALALIFLSLNGWLHDLSDYYLFSAHMVQHLVLTLVAPPLL
                     IMGTPGWMLRPALRWRGVGPVARAITTAPRAFVIFNVVLIAWHLPPVYGLAMAYHPVH
                     IAQHLCFMVGATLMWWPILSPLPELPRLSYPAQMLYLFLLTIPMSLVAVSIVYSGKVL
                     YPAYAAAPRIWGISPLQDQMIGALVMWIPGGLFFFAIISVVFFRWQQEGEDSTAAAQV
                     GWVRGSS"
     gene            complement(4371..4736)
                     /locus_tag="VFN38_00780"
     CDS             complement(4371..4736)
                     /locus_tag="VFN38_00780"
                     /inference="COORDINATES: protein motif:HMM:NF015582.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome C oxidase subunit IV family protein"
                     /protein_id="HET9010310.1"
                     /translation="MAHDTSHEPHANVDHTAMGIEKEHPTWSTYWKVALILTVITAVE
                     VWVYYIPSFVASRMFVPSLLIMSAVKFATVVLFYMHLRYDHKLFRALFTGPLIIAALT
                     IVGLLFLFGKLTVGGGAPT"
     gene            complement(4746..5438)
                     /locus_tag="VFN38_00785"
     CDS             complement(4746..5438)
                     /locus_tag="VFN38_00785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit 3"
                     /protein_id="HET9010311.1"
                     /translation="MTHATTALGAPSAHDDTHGHPPTSTGLDNKKIAIWAFIGSECML
                     FASLISTYLIYKGHSVVGPYPHDACLPPACSTKLPAILNIPVTSASTFVLLMSSLAMV
                     LALAAVELKDQPKRTTSERILGSSKLWLWMTALLGTTFLGFQAYEFTSFVHEGLTIKT
                     NLFGSSFFTLTGFHGAHVTAGVLWLLTLLAIDYRRGLGPKDAINVDLAALYWHFVDVV
                     WIVIFTLVYLIK"
     gene            complement(5458..>7311)
                     /gene="ctaD"
                     /locus_tag="VFN38_00790"
     CDS             complement(5458..>7311)
                     /gene="ctaD"
                     /locus_tag="VFN38_00790"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit I"
                     /protein_id="HET9010312.1"
                     /translation="AIGGLEALLIRLQLMFPENTFISAQTYNELFTMHATTMVFLAIM
                     PMSAAFFNFLIPLQIGARDVAFPRLNAFSYWVFLFGGLFMNSSWLIGAAPNGGWFGYA
                     PLTTMQFSPGLNIDFWVLGLQILGVSSLAAAFNFITTIINMRAPGMNLMRMPMFTWNA
                     FVVQFLLILAFPVITIALVFLQFDRFFGTNFYTTAAGADPLLWQHLFWIFGHPEVYIL
                     ILPAFGLTSEIIPTFSRKPIFGYPVMAYATMLIAFLGFGVWAHHMFAVGMGPIADTVF
                     GVTTMLIAIPTGVKIFNWIFTMWGGSIQFTTAMKFAIGLVCLFTIGGISGVMHASPPA
                     DLQQTDTYFIVAHFHYVLFGGSMMGIFGGIYYYYPKMTGRLLSEKLGNWHFWLMFIGM
                     NLTFFPMHFSGLMGMPRRIYTYDAGQGWEAFNMMSTVGTGILMVGIAIFLVNFFRSFR
                     HGAVAGNDPWKAATLEWSIPSPPPEYNFARIPRVTSRVPLWDITSPRLASEVPHTRDG
                     DKRLDVDVGAKHVGHGHPNPVGGEPRQPAEAGAHIEHATGKSAKELGIPMPNPTIKPL
                     ICAVGLTIMFSGLLFIHKDKMPLALATIISGALIMTMALYAWLLTPLEDAH"
BASE COUNT         1251 a         2270 c         2730 g         1060 t
ORIGIN      
        1 ggtggatcat gttgcgcggc gtcagcgaat cgagcgtgga gaggcccgag ccgtcggcga
       61 cgttgatcct ggtggggtcc gcgccgacct tcttggacag gaactcgcgg atgttcgcga
      121 ggcccgcatc ggccgagctc atgccgcccg gtgcgatggc gcgcgcggcg tcgcggtaga
      181 gcagctcggc cacgacgttg atgctctcgc ggttcatctc ggagatgatc tgcgacaggg
      241 gcggcgacgc gaagcccgcc accttcacgg cgttgcccgg cgtcttgccg ggcttcaccg
      301 cgccgtccac cgtgacgccg gcgttccgaa gcgcggcgtg cagcgcgcca gccgtgaaga
      361 gggccgggtc ggggacgacc agcgaatagc gcagcgggcc gctgctcgcg cccaccgagc
      421 cgctgacgac gatgccgtcg ccgctctgcc gcgccacgat gcggcccccc cgtccgcgca
      481 cgacccgcac gttgctcgtg agggggatgg tggaggtcgc cggctcgagc tcgacgcgcg
      541 ccgtgccccc ctcggggcgc acgaccaccc agacgaggtt ctcgttgagc gagagcgccg
      601 agacgcgcgc ggcgtaggcg gcgccgaggt acttggtctt ccagccgtcg gggatcttct
      661 ggtcgtcgaa cgccgaggcg tcgtagatca aatccccctt cacgcgcttc acgccggcgg
      721 cggcgatggc gcgcgccagg gtgttcatcg ggaggttcgc gtccttccag aagcgcgacg
      781 acatggaggg atcgccgtcg ccgcgcaggt agaggttgcc gctgacctct ccgcccggcg
      841 cgctcgcgga atcgcgcagc acgtcggtgg agaaggtgtg ctccgggccg aagcggtcga
      901 gcgcggcggc ggtggagtac agcttcatcg tggacgcggg ctgcatcatg tcgcccgcgc
      961 cgtgggcgaa cagggtgtcg ccgcgggtga gggagacgac catcacgccg aacttcccgc
     1021 cgcgaatgcg gttgtcgatc atgctggcga agtcgcccgc cagctccgcg gcgccgcgcg
     1081 gcgaggtcca cgacaccggg ggcggcgcgg cggggcgggt ggcccggacc cggcgcgtgg
     1141 tggggcgctt ggtgcgggcg cgccgggtgc gcgactgcgc ccccgcggag ccaacggccc
     1201 caatggaggc ttcccgtccc gaatccgggc ggacgaggct ccccacgtcg ccggctggcg
     1261 ccaggaggag gacggcaagg gcgacggttg ccgtcacgcg cggggcgttc ggccggaaga
     1321 cgattcgatg catcaggctg gcgaaaggca agaaaaagac cgtcgatcca tcagaccttg
     1381 aggatgatgt tccgccggta cagcaggtac aggatgccgt accagaagag cacgaaggcc
     1441 agggcgaagg ccagcgaggc gttgaggggg ctgagccacg aggcgaagaa ggtctgatac
     1501 agccaggcct ggagcgggat ccgtcgtccc cccgaatcca ccttgatgat ggagtagatg
     1561 agccgggcca tgacgcccga gccgatgaag gcgatgatcg ggttgacgcc gtagatgacg
     1621 aagaacttcg tccagccgcg gaccttctgg aaatcgacga tccacatgat cgtcgcgagg
     1681 ctgagcgccg ccatgccggc ggtgaagacg acgtaggagc tggtccagag gctcttgttg
     1741 atcgggaaca cccagtgcca catgagcccg accatcatcg cgatggagcc ggcggcggac
     1801 atccccgcca ggcgctcgct gagcgggcgt cgttcggcga tccaccgccc cgtcatgttg
     1861 cccagcatgg ccgtgcagat ggccgggacg gtgctgagga tcccctcggg atcccaggtg
     1921 accccggaga cccagaggtg gttccccagc ccccaccgcg accagtcgag gaagaggcgg
     1981 tcggtccacg ccgccatcgt gcgctgcggg tcgttcagca gcagtgcccc gatcgtcccc
     2041 tcgcccggga ccgggagggc ggtcatcacg atccagtacc cgagcaggag agtggcgatg
     2101 atggcggcct gctggcgcag gttggtgcgc tgggtgagga gcgcggccac catgtacgcg
     2161 atgccgatgc gctggaggac ccccatgaag cgccagtgcg ggagccggtc ggcgattcgc
     2221 tggaggaggg tggggtcggc gatgccggcc acctcacccc aggtgaagta ggggaagccg
     2281 ttgaccagga agccgaacag gaagatgagc acgccgcgcc ggatgatctg ggcgcggatc
     2341 gcgcgctcgt cgtcgccgcg ggctcggcgg gaggagaggg agaggtaggt ggtgatcccc
     2401 gcgatgaaca ggaagaaggg gaagaccagg tcggtggggg tccagccgtt ccaggccgcg
     2461 tgctcgaggg gagggtagat gcttccccag ctccccgggt cgttcacgag gagcatgccg
     2521 gccacggtga tcccgcggaa cacgtcgagc gagagcaggc gctcgcgggc gggggccggc
     2581 tggggggcga gatcgcccgg ccgcaggtcg gtggtccgcg ggtggttgct gagggtgatg
     2641 gccatcgtgg cgacctcgtc gatgcgtgag ggaggcgagc gctggcgtcg ccacctcggt
     2701 taactgaatg acggtggggg catttgtcga gccggcgggc gggccggcct ttccgggccg
     2761 ccggtgatgc tccagattgg cgggagggcg cgtgcggacc ccgcgctcaa ggacgactca
     2821 cgtgcgcagg cgcgacatcg tcgcgctgcc ggatagcggg acatctgaac cacgtcgagc
     2881 ggagggggac atgaagcata cgatcatgcg cgacggcatc gtcgcgggcc tgctgggcgc
     2941 cacggcggtc gcgctctggt tcctggggct ggactcgctg tacgcgcacc ccctcgcgac
     3001 ccccgaggcg ctgggccgcg gcctcctgcg ggtgttcggg ccgccgggca acgaggggcc
     3061 gctgaccttc gtggtgggct acacgatctt ccactacttc gccttcatcg tcgccggcgt
     3121 cctgctcgcg gtgatcgtgc actgggcccg cagccagccc acggtgctgg ccggcgcgat
     3181 gatgctgttc gtggcgttcg agatcggctt ctacggcctg agctccgcgc tgcaggagtc
     3241 gccattcctc ggcgcgctgg gctgggcgca ggtggcgacg gggaacctga tcgccgcgct
     3301 ggtgatgggc gggtacatgt ggcgggcgca ccccgagctg aaggaggagt tcagctacgc
     3361 gctcgggggg cgggagtagg ggggcagcgc gaggtatcca accggccgac gcctgccctc
     3421 cggacgacgc gatccgtcac ccgacctgcg caccccgcaa cgaaagaccg gccggcgcga
     3481 ggcgccggcc ggtcgtcgtt cgccgcccgc cggcggccgt cagctgctgc cccgcaccca
     3541 tcccacctgg gccgccgccg tcgagtcctc gccctcctgc tgccaccgga agaacaccac
     3601 cgagatgatc gcgaagaaga acaggccgcc ggggatccac atgacgagcg cgccgatcat
     3661 ctgatcctgg aggggagaga tcccccagat ccgcggcgcc gcggcatacg cggggtagag
     3721 cacctttccc gagtacacga tgctcacggc cacgagcgac atcgggatgg tgagcaggaa
     3781 caggtacagc atctgcgccg ggtacgagag gcgcgggagc tcgggcaggg ggctcaggat
     3841 cggccaccac atcagcgtgg cgcccaccat gaagcagagg tgctgcgcga tgtgcaccgg
     3901 gtggtaggcc atcgccaggc cgtacacggg cgggaggtgc caggcgatga gcacgacgtt
     3961 gaagatcacg aaggcgcgcg gcgccgtggt gatcgcccgg gccacggggc ccacgccgcg
     4021 ccagcggagc gcggggcgca gcatccagcc gggcgtcccc atgatgagca gggggggcgc
     4081 cacgagggtg agcacgaggt gctgcaccat gtgggcgctg aacaggtaat agtcgctcag
     4141 gtcgtggagc cagccgttga gcgacaggaa gatcagcgcg agcgcggaga agaaggtcgc
     4201 ccgctgcgcc gtggtcggcg tcggccgcgg gccggcgggg gcgtggccgg cgcgccagtg
     4261 gtacagcgcg ccgagccccg ccagaccgag caccgtgctc cagtgcacgg tgaactcggt
     4321 gagtgcgatg cgcgcggcgg gatgcagcag cagcgcgacc ggcgggtgca tcaggtcggg
     4381 gctccccccc cgacggtgag cttgccgaac aggaacagga gcccgacgat ggtcagcgcc
     4441 gcgatgatca gcgggccggt gaacagcgcg cggaacagct tgtggtcgta gcggaggtgc
     4501 atgtagaaga gcaccaccgt cgcgaacttc accgccgaca tgatgagcag cgaggggacg
     4561 aacatccgcg aggcgacgaa gctcgggatg tagtagaccc acacctcgac cgcggtgatg
     4621 acggtgagga tgagcgcgac cttccagtag gtggaccagg tcgggtgctc cttctcgatc
     4681 cccatcgccg tgtggtcgac gttggcgtgc ggctcgtgcg aggtgtcgtg tgccatggcg
     4741 tcggcctact tgatgaggta gacgagcgtg aagatcacga tccagacgac gtcgacgaag
     4801 tgccagtaca gcgccgcgag gtccacgttg atcgcgtcct tgggcccgag cccgcgccgg
     4861 tagtcgatcg cgagcagggt gaggagccag aggacgcccg ccgtgacgtg ggcgccgtgg
     4921 aagccggtga gggtgaagaa gctcgacccg aacaggttcg tcttgatcgt cagcccctcg
     4981 tgcacgaacg aggtgaactc gtacgcctgg aagccgagga aggtggtgcc gagcagcgcc
     5041 gtcatccaca gccacagctt ggacgagccg aggatccgct cgctggtggt gcgcttcggc
     5101 tggtccttca gctccaccgc cgccagcgcg agcaccatcg ccagcgacga catgagcagg
     5161 acgaaggtgg acgcggaggt gacggggatg ttgaggatcg ccggcagctt ggtgctgcac
     5221 gccggcggga ggcaggcgtc gtgcgggtac ggcccgacga cgctgtgccc cttgtagatg
     5281 agataggtgg agatgagcga cgcgaagagc atgcactcgg agccgatgaa ggcccagatg
     5341 gcgatcttct tgttgtcgag tcccgtcgag gtcggcgggt gtccatgcgt gtcgtcgtgc
     5401 gcgctgggcg cgccgagcgc ggtggtggcg tgagtcactg gagtgggtct cggggaatta
     5461 gtgggcgtcc tcgagcgggg tcaggagcca cgcgtagaga gccatcgtca tgatgagcgc
     5521 gccgctgatg atggtggcca gcgcgagggg catcttgtcc ttgtggatga acagcaggcc
     5581 ggagaacatg atcgtcaggc cgacggcgca gatgagcggc ttgatcgtcg ggttcggcat
     5641 cgggatgccg agctccttcg ccgacttgcc cgtggcgtgc tcgatgtgcg cgcccgcctc
     5701 ggccggctgg cggggctcgc cgcccaccgg gttcggatgg ccgtggccga cgtgcttggc
     5761 cccgacgtcc acgtcgaggc gcttgtcacc gtcgcgcgtg tgcggcacct cggaggcgag
     5821 ccgcggcgag gtgatgtccc acagcggcac gcgcgacgtc acgcgcggga tgcgggcgaa
     5881 gttgtactcc ggcggcggcg aggggatgga ccactcgagc gtcgccgcct tccacgggtc
     5941 gttccccgcg accgcgccgt ggcggaagct gcggaagaag ttcacgagga agatcgcgat
     6001 ccccaccatc aggatgccgg tccccaccgt gctcatcatg ttgaacgctt cccagccctg
     6061 gcccgcgtcg taggtgtaga tgcggcgcgg catccccatc agcccggaga agtgcatcgg
     6121 gaagaaggtc aggttcatcc cgatgaacat cagccagaag tgccagttgc cgagcttctc
     6181 gctcagcagg cggccggtca tcttcgggta gtagtagtag atcccgccga agatgcccat
     6241 catcgagccg ccgaacagta cgtagtggaa gtgggcgacg atgaagtagg tgtcggtctg
     6301 ctggaggtcg gccggcggcg acgcgtgcat gacgcccgag atgccgccga tcgtgaacag
     6361 gcacaccagg ccgatcgcga acttcatcgc cgtcgtgaac tggatcgagc ctccccacat
     6421 cgtgaagatc cagttgaaga tcttcacgcc cgtgggaatg gcgatcagca tcgtcgtcac
     6481 gccgaacacg gtgtcggcga tcggccccat gcccacggcg aacatgtggt gcgcccacac
     6541 gccgaagccg aggaatgcga tgagcatcgt ggcgtacgcc atcaccggat agccgaagat
     6601 cggcttccgc gagaaggtcg ggatgatctc ggacgtcagc ccgaacgcgg gcaggatgag
     6661 gatgtagacc tcggggtgcc cgaagatcca gaacagatgc tgccagagca gcgggtcggc
     6721 gccggcggcg gtcgtgtaga agttcgtgcc gaagaaccgg tcgaactgga ggaacacgag
     6781 cgcgatcgtg atgaccggga acgcgaggat cagcaggaac tgcacgacga acgcattcca
     6841 cgtgaacatc ggcatgcgca tcaggttcat ccccggcgcg cgcatgttga tgatcgtcgt
     6901 gatgaagttg aacgccgcgg cgagcgagct gacgccgagg atctgcaggc cgagcaccca
     6961 gaagtcgatg ttcaggccgg gcgagaactg catcgtggtc agcggcgcgt agccgaacca
     7021 gccgccgttc ggcgccgcgc cgatgagcca cgacgagttc atgaacaggc cgccgaacag
     7081 gaacacccag tagctgaacg cgttgagccg cgggaaggcg acgtcgcgcg cgccgatctg
     7141 gagcgggatg aggaagttga agaaggccgc cgacatcggc atgatcgcga ggaacaccat
     7201 cgtcgtggcg tgcatcgtga acagctcgtt gtacgtctgc gccgagatga acgtgttctc
     7261 ggggaacatg agctgcagac ggatgagcag cgcctcgagc ccgccgatcg c
//
LOCUS       DASSYW010000047         2956 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1159298, whole genome shotgun sequence.
ACCESSION   DASSYW010000047 DASSYW010000000
VERSION     DASSYW010000047.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2956)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2956)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2956
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1159298"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(228..929)
                     /locus_tag="VFN38_00795"
     CDS             complement(228..929)
                     /locus_tag="VFN38_00795"
                     /inference="COORDINATES: protein motif:HMM:NF019349.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HET9010313.1"
                     /translation="MAADAPHGSRPEQVYLRLRDLIVQGLLAPGSRVVETEVATRLGV
                     SRTPVREALQRLQQEGFVVGAPGAQQARLTVAPLTRADVHELLNIVGELEGLGARWAA
                     GLPVAERGALAKDLKALNADFLRTGRTAPIDHGRLYEADERLHRQIVVAGAGPRLIAL
                     HDSVKPQAERYIRMYISMLTSDIDTSVAEHDAMIDAIEAGLADEAQAAVQTNWRHAAE
                     RIGRVIEVAGERGSW"
     gene            1138..2550
                     /locus_tag="VFN38_00800"
     CDS             1138..2550
                     /locus_tag="VFN38_00800"
                     /inference="COORDINATES: protein motif:HMM:NF012321.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="von Willebrand factor type A domain-containing
                     protein"
                     /protein_id="HET9010314.1"
                     /translation="MRSTPSRVAPPVILLLAALLVPSLAARAPEHPSQLASTLVVGRV
                     TDPSGGAVSQVSVTVAGRASATVTDADGRYALRVGRAAGIERVVVTFRRVGYLRMDLP
                     LALRGDTVRLDARLIPSAPAQKLESVVTGAPPAKADALHDQARRTDPGSQLGMPHSHP
                     APTPREMTRTSIVGRTDDPRRRRHPYPHPVVDSANTEAYEQIDENAFRSPLVAPLSTF
                     SVDVDRASYANVRRFLTGGSLPPRDAVRIEELVNYFPYADPAPEGRDPIRITTEVAPA
                     PWNPAHDLVRIGLRARDVDMRRAPPSNLVFLIDVSGSMQGPNRLGLVKQSLALLVNQL
                     REQDRVAITVYAGSAGLVLPSTSGADKQRILAALDGLQAGGSTAGGAGIRLAYDVARQ
                     GFLRGGNNRVILCTDGDFNVGQSSDAELVRLIEEKRREGSFLTILGYGMGNYKDQKME
                     RLAGAGNGNYAYIDDLLEAS"
     gene            2551..>2956
                     /locus_tag="VFN38_00805"
     CDS             2551..>2956
                     /locus_tag="VFN38_00805"
                     /inference="COORDINATES: protein motif:HMM:NF023459.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfbK domain-containing protein"
                     /protein_id="HET9010315.1"
                     /translation="MLVHEMGGTLLSVAKDVKLQVEFDPTRVQAYRLLGYEDRLLRDE
                     DFANDVKDAGDVGAGHTVTALYEIVPVGVKMDLPKVDPLKYQKTPDTAAVRLKADATG
                     AKDELMTVKLRYKAPDGDASKLIIVPVKNRTGE"
BASE COUNT          422 a         1115 c         1000 g          419 t
ORIGIN      
        1 gcgtgaggcg aggaattcgg agtgggtatc ggtttgggac ggcgtgagga gtgcggcacg
       61 cgcccgccct tcatccgccg ttcagaaccg ataccctttt ccactttcgg cgccgcccgc
      121 cgcccgccgc ccgcccgacg actcgccgca cgccgcggcg ccgcatcggc agttcgaacg
      181 ccgtacgccg cggcgccgca tcggcaggaa gcgccgcccc cccgccgcta ccagctcccc
      241 cgctcgccgg ccacctcgat cacccgcccg atccgctcgg ccgcgtggcg ccagttcgtc
      301 tgcaccgcgg cctgcgcctc gtccgccagt cccgcctcga tcgcgtcgat catcgcgtcg
      361 tgctcggcca ccgacgtgtc gatgtcgctc gtcagcatgc tgatgtacat gcggatgtag
      421 cgctccgcct gcggcttcac gctgtcgtgc agcgcgatga gccgcgggcc ggctcccgcg
      481 acgacgatct gccgatgcag ccgctcgtcc gcctcgtaca gccggccgtg gtcgatgggc
      541 gcggtgcggc cggtccgcag gaagtcggcg ttgagcgcct tgaggtcctt cgccagcgcc
      601 ccacgctcgg cgaccggcag gccggccgcc cagcgcgcgc ccagcccctc cagctccccc
      661 acgatgttga ggagctcgtg cacgtccgcg cgcgtgaggg gcgccaccgt gagccgcgcc
      721 tgctgcgcgc ccggcgcccc caccacgaat ccctcctgct ggagacgctg tagcgcctcg
      781 cgcaccggtg tgcggctcac ccccaggcgc gtcgccacct ccgtctccac gacgcggctg
      841 cccggcgcga ggagcccctg cacgatcagg tctcgcagcc gcaggtacac ctgctccggt
      901 cgcgacccgt gcggcgcatc ggccgccatc gagtcggccg ccgcgcgtgt cccttgggcg
      961 ccagtcgtcc tggcggtacg gctggaagtc ggggtgcggc gcgcgggcat gtggaggggg
     1021 tgacggtcgg ctggaatata gggaacgagc cacgcccgga gaacatgatt ctgacggtgt
     1081 gcaaggcgcc gagccgcggg cgtctccttg gcgaactccc ttctcacgag gccgctcatg
     1141 cgctccaccc cttcgcgcgt cgcaccaccc gtcatccttc tgctggctgc cttgctcgtg
     1201 ccgtccctcg ccgccagggc gccagagcat ccgtcccagc tcgcctccac cctggtcgtc
     1261 ggccgggtca ccgacccatc cggcggggcg gtcagccagg tctccgtcac cgtcgccggg
     1321 cgcgcgtcgg ccaccgtgac ggacgcggac ggacggtacg cgctgcgcgt cgggcgggca
     1381 gccgggatcg agcgcgtcgt cgtcaccttc cgccgcgtcg gctatctgcg gatggacctc
     1441 cccctggccc tgcgcggcga cactgtccgg ctggacgcgc ggctcatccc atcggcgccc
     1501 gcccagaagc tggagtccgt cgtcaccggc gcgccccccg ccaaggcgga tgcgctgcac
     1561 gatcaggcgc gccgcaccga tccagggtcg cagctcggga tgccgcactc gcacccggcg
     1621 cccacgccgc gcgagatgac acgcaccagc atcgtcgggc gcacggacga cccgcgacgc
     1681 cgccgccatc cgtatccgca tcccgtggtg gacagcgcga acaccgaggc gtacgagcag
     1741 atcgacgaga acgcctttcg ttcgccgctc gtggcaccgc tgtccacctt ctcggtggac
     1801 gtggaccggg cgtcgtacgc caatgtgcgg cgcttcctca ccggcggcag cctcccgccg
     1861 cgcgacgcgg tgcggatcga ggagctggtg aactacttcc cctacgccga cccggcgccc
     1921 gagggccgcg atcccatccg catcaccacc gaggtcgcgc cggcgccctg gaacccggcg
     1981 cacgacctcg tgcgcatcgg gctgcgcgcc cgcgacgtgg acatgcgccg cgctccgccg
     2041 agcaacctcg tcttcctcat cgacgtgtcg ggctcgatgc agggaccgaa ccggctgggc
     2101 ctcgtcaagc agtcgctcgc gctgctggtg aaccagctcc gcgagcagga tcgcgtggcc
     2161 atcaccgtgt acgcgggcag cgccggcctc gtgcttccct ccacgtcggg cgcggacaag
     2221 cagcgcatcc tcgccgcgct cgacgggctc caggccggcg gctccaccgc cggcggcgcc
     2281 gggatccggc tcgcctacga cgtcgcgcgc cagggcttcc tgcgcggtgg caacaaccgc
     2341 gtcatcctgt gcaccgacgg cgacttcaac gtgggccagt cgagcgacgc ggagctggtg
     2401 cggctgatcg aggagaagcg gcgcgagggc tcgttcctca ccatcctcgg ctacggcatg
     2461 ggcaactaca aggaccagaa gatggagagg ctcgccggag cggggaacgg caactacgcg
     2521 tacatcgatg acctgctgga ggcgagctag atgctggtgc acgagatggg cggcacgctg
     2581 ctctccgtcg ccaaggacgt gaagctccag gtcgagttcg atcccacccg cgtccaggcc
     2641 taccggctgc tcggctacga ggaccgcctg ctgcgcgacg aggacttcgc gaacgacgtg
     2701 aaggatgcgg gagacgtcgg ggccggccac accgtgacgg cgctgtacga gatcgtcccc
     2761 gtgggcgtga agatggacct gccgaaggtc gatcccctga agtatcagaa gacgccggac
     2821 acggcggcag tccgcctaaa ggcggacgct acgggagcga aggacgagct gatgacggtg
     2881 aaactgcgct acaaggcgcc ggatggcgat gccagcaagc tgatcatcgt ccccgtgaag
     2941 aaccggacgg gggaac
//
LOCUS       DASSYW010000048         2237 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1159245, whole genome shotgun sequence.
ACCESSION   DASSYW010000048 DASSYW010000000
VERSION     DASSYW010000048.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2237)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2237)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2237
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1159245"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..676
                     /locus_tag="VFN38_00810"
     CDS             <1..676
                     /locus_tag="VFN38_00810"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HET9010316.1"
                     /translation="GEPIITLKDVEKTIDLGGQPNWLLRRITLDIKSGDFVTIMGPSG
                     AGKSTLLSILGMLDHEWRGQYFLGGTAVHGLSPRERAALSRRMVGFVFQQYHLLDDLT
                     VAENLAVPLDYRDVPKSERQALVADALDRFGIVGKKDLFPRQLSGGQQQLVGIARAVI
                     AQPALLLADEPTGNLHSAQAREIMALFKKLNDAGTTVVQVTHSEENARWGHRIITLKD
                     GWLEGA"
     gene            788..>2237
                     /locus_tag="VFN38_00815"
     CDS             788..>2237
                     /locus_tag="VFN38_00815"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HET9010317.1"
                     /translation="MFPDLRTALRSLARRPGFALLVIATLAIGIGANTAIFSVLNAVL
                     LRPLPYVESERLVNVHGNYPQGGLSSYSLPDFLDVRERTRSMTAVAGFTTAGGNLATT
                     GLPERVDLGYVTGDFFKVLRVSPALGRTVTRDDERGRPGTVVLSYEAWQGRFQGAPDV
                     IGKGVSIDGRPYTVVGVAPRIEAFPQKVDFWIGIRTDSVTQGRRNEYLQVIGRLRPGV
                     TVEQADREVLSIMEQLAREYPQSNLNFRSKVASLQEDVVGRVRPALLVFMGAVGLVLL
                     IACANVANLLLARAVGREREVAIRSAMGASRTRIFRQLLVESVTLGLLGGLAGIGLAY
                     IGTRLLRASDVGDIPRLAEVTVDARVLAFAVVVSVATGLLFGLAPALRLSREELQPSL
                     RGSARGSSGTRGERRLRGALVLAEVALAVVLLVGAGLLMRSFEALRRTDPGFSSERVL
                     VARVSLPTSAYDSAYKRRAFWQQLDERLHALPG"
BASE COUNT          305 a          760 c          822 g          350 t
ORIGIN      
        1 cggcgagccg atcatcacgc tcaaggacgt cgagaagacg atcgacctcg gcggccagcc
       61 caattggctg ctgcgtcgca tcacgctcga catcaagtcg ggcgacttcg tgacgatcat
      121 gggcccgtcg ggcgccggca agtcgacgct gctctcgatc ctcggcatgc tcgatcacga
      181 gtggcgcggc cagtacttcc tcggcggcac cgcggtgcac gggctgtcgc cccgcgagcg
      241 tgccgcactg tcgcgccgca tggtcggctt cgtgttccag cagtaccacc tgctcgacga
      301 cctgacggtg gccgagaacc tcgcggtgcc gctggactat cgcgacgtgc cgaagagcga
      361 gcggcaggcg ctcgtcgccg atgcgctcga tcgcttcggg atcgtgggca agaaggacct
      421 gttcccgcgg cagctctcgg gcgggcagca gcagctcgtg gggatcgcgc gcgcggtgat
      481 cgcgcagccg gcgctgctgc tggccgacga gcccacgggg aacctgcact cggcgcaggc
      541 gcgcgagatc atggcgctgt tcaagaagct gaacgacgcc ggcacgacgg tcgtgcaggt
      601 gacgcattcc gaggagaacg cacgctgggg ccaccggatc atcacgctga aggatgggtg
      661 gctggagggt gcgtgatacg gcgggactcg ggactcggga ctcgggactc gaagtgccga
      721 gtgcgccgag tccccagtcc cgagtcgcga gtcccgacgt cgaccatctc gaacccggta
      781 gtgacccatg ttccccgacc tccgcaccgc cctgcgttcg ctcgcacgcc gcccgggttt
      841 cgcgttgctc gtgatcgcga cgctcgccat cggcatcggc gcgaacaccg cgatcttcag
      901 cgtgctgaac gccgtgctcc tccggccatt gccgtacgtg gagagcgagc gcctggtgaa
      961 cgtgcacggc aactacccgc agggcggact gtcctcgtac tcgctgccgg atttcctcga
     1021 cgtgcgggag cgcacgcgca gcatgacggc tgtggcgggg ttcacgacgg cgggcggcaa
     1081 cctcgcgacg accgggctgc cggagcgcgt ggacctgggc tacgtgacgg gcgacttctt
     1141 caaggtgctg cgcgtgtcgc cggcgctcgg gcgcacggtc acgcgcgacg acgagcgcgg
     1201 gcggcccggg accgtcgtcc tctcgtacga ggcgtggcag ggccgattcc agggtgcccc
     1261 cgacgtgatc gggaaaggcg tgtcgatcga cgggcggccg tacacggtcg tcggcgtcgc
     1321 gccgcgcatc gaggcgtttc cgcagaaggt cgatttctgg atcggcatcc gcaccgacag
     1381 cgtcacgcag ggacgccgca acgagtacct gcaggtcatc ggccggctgc gcccgggagt
     1441 caccgtcgag caggcggatc gcgaagtgct gtcgatcatg gagcagctcg cgcgcgagta
     1501 cccgcagtcg aacctgaact tccgcagcaa ggtcgcgtcg ctgcaggagg atgtcgtcgg
     1561 tcgcgtgcgc cccgcgctcc tcgtgttcat gggcgccgtc ggcctggtgc tcctcatcgc
     1621 ctgcgcgaac gtggccaatc tcctgcttgc gagagccgta ggtcgtgagc gcgaggtggc
     1681 gatccgcagt gcgatggggg cgagccgcac gcgcatcttc cgccagctgc tggtcgagag
     1741 cgtgacgctc gggctgctgg gcgggctcgc cggcatcggg ctcgcgtaca tcggcacgcg
     1801 gctgctgcgc gcgagcgacg tcggcgacat cccgcggctg gccgaggtga cggtcgacgc
     1861 gcgcgtgctc gcgttcgccg tcgtggtgag cgtggccacc ggactgctgt tcggcctcgc
     1921 gccggcgctt cggctgtcgc gcgaggagct gcagccgtcg ctgcgcggca gcgcacgcgg
     1981 ctcgtccggc acgcgtggcg agcggcggct gcgcggcgcg ctcgtgctcg cggaggtcgc
     2041 gctcgccgtc gtgctgctgg tcggcgccgg gctcctgatg cggagcttcg aggcgctgcg
     2101 gcgcaccgat ccggggttca gctcggagcg cgtactggtc gcgcgcgtct cgctgccgac
     2161 gtcggcgtac gacagcgcgt acaagcgccg cgccttctgg cagcagctcg acgagcggct
     2221 gcacgcgctc cccggcg
//
LOCUS       DASSYW010000049         2233 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_993573, whole genome shotgun sequence.
ACCESSION   DASSYW010000049 DASSYW010000000
VERSION     DASSYW010000049.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2233)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2233)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2233
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_993573"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(20..598)
                     /locus_tag="VFN38_00820"
     CDS             complement(20..598)
                     /locus_tag="VFN38_00820"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HET9010318.1"
                     /translation="MEIILDAAAALIAEGGAESLTMQALADRARTSKGSLYHFFPDLQ
                     AVLCALADRHGVAITALTTELIADRSVDWPRLTLDQTIDRFLAPVAYLAAHPDLLALA
                     RTPMVLDRATRRLTPIRELALHILGRRCAGLPARQRLAAASTMVALLDGIVGYSLRCD
                     DVPRQLMLVELRRVLRAYLGELGECARGVSRR"
     gene            841..1677
                     /locus_tag="VFN38_00825"
     CDS             841..1677
                     /locus_tag="VFN38_00825"
                     /inference="COORDINATES: protein motif:HMM:NF022750.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3108 domain-containing protein"
                     /protein_id="HET9010319.1"
                     /translation="MVSAPNPSLTRRSSPAALLLALGAAVAVGMPSMAAAQSFVTRES
                     VTEATHGPVGRASRGRIGVGERARYELRLAGREVGTGSLEVVGAERISGYRTLRTRLQ
                     VSGGVLFARVDDRFESWIDPERLFSRRFVQDQKELTNKRYREYHFAPEARTYRQVDSG
                     EDGTLATGEPLDDVSFLFYVRTLPLRVGEVDTIPRYFKQGRDVIIRVLRKERVTVPAG
                     TFETIVVQPTITNAGGLFGQGGEAEVYFSDDMARTLVMLKSRVPVIGSLSLHLKDYRP
                     GQ"
     gene            1731..>2233
                     /locus_tag="VFN38_00830"
     CDS             1731..>2233
                     /locus_tag="VFN38_00830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015570095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HET9010320.1"
                     /translation="MHRPSAPASSESAPAPLEHRKVLVAFSGLLLVLLLAALDSTIVS
                     TALPTIVGELGGLEHLAWVVTAYLLAQTVVTPVYGKLGDLYGRKVVLQSAIVLFLAGS
                     ALCGLSQNMTQLIVFRAIQGLGGGGLNVTTQAIVGDIVPPRERGKYQGFFGAVFGLAS
                     IAGPLLGG"
BASE COUNT          324 a          786 c          793 g          330 t
ORIGIN      
        1 tgccccccgg ccgcgcgcgc tatcgccgcg acactccgcg cgcgcactcc cccagctcgc
       61 cgagatacgc ccgcagcacc cgccgcagct cgacaagcat gagctgccgc ggcacgtcgt
      121 cgcagcgcag gctgtacccg acgatgccgt cgagcagcgc gaccatcgtg gaggccgcgg
      181 cgaggcgctg gcgtgccggc agcccggcgc agcgtcgccc gagaatgtga agggcgagct
      241 cccggatcgg cgtcagccgg cgcgtcgcgc ggtccagcac catcggcgtg cgcgccagcg
      301 cgagcaggtc cggatgcgcc gcgaggtagg cgaccggtgc gagaaagcgg tcgatcgtct
      361 gatcgagcgt gaggcgcggc caatcgacgc tccgatccgc gatcagctcc gtcgtgagag
      421 ccgtgatcgc cacgccatgc cggtccgcga gggcgcagag caccgcttgc agatcgggaa
      481 agaagtggta caacgacccc ttggacgtcc gtgcgcgatc cgccagcgcc tgcatcgtga
      541 ggctttcagc tcccccctcg gcgatgagcg ctgcggctgc gtcgagaatg atctccacgc
      601 gccgctcgcc gcggagctgg cgcggctggc gagggccctc cagcggttcg gcgatcagag
      661 acgccggcgg gaacgcggac gcgtgtctca cggatacgga agggaagcgg ggcggtcggt
      721 gtggccggcc cggcgtggcg ggacgccgtg gcgacggttg acaactagac gaattggtct
      781 aattttaatc ccatgaatcc ggaaggtcca gtgcgcagtg gttgccccgg cgagcgggtc
      841 atggtatccg ccccgaaccc gtcgctcacc cgtcgctcct cgcccgccgc gctgcttctc
      901 gcgctgggag ccgccgtcgc cgtcggcatg ccctccatgg ccgccgcgca gagcttcgtg
      961 acccgcgaga gcgtcaccga agcgacgcac gggcccgtgg gccgcgccag ccgagggcgc
     1021 atcggcgtcg gtgagcgcgc ccggtacgag cttcggctgg ccggacggga ggtgggcacc
     1081 ggctcgctcg aagtggtggg cgcggagcgg ataagcggct accgcacgct gcgcacccgg
     1141 ctccaggtgt cggggggcgt cctgttcgcg cgcgtcgacg accggttcga gtcgtggatc
     1201 gatccggagc ggctcttctc gcgccgcttc gtgcaggacc agaaggagct cacgaacaag
     1261 cgctaccggg agtaccattt cgcgcccgag gcgaggacgt accggcaggt ggacagcggc
     1321 gaggatggca cgctggcgac cggcgagccc ctggacgacg tcagcttcct gttctacgtc
     1381 cgcaccctcc cgctgcgcgt cggcgaggtg gacaccattc cccgctactt caagcagggg
     1441 cgcgacgtga tcatccgcgt gctgcgcaag gagcgcgtca cggtaccggc cggcaccttc
     1501 gagaccatcg tcgtgcaacc gacgatcacc aacgccggcg gcctgttcgg tcagggcggg
     1561 gaggcggagg tgtacttctc ggacgacatg gcgcgcacgc tcgtgatgct gaagagcagg
     1621 gtgccggtga tcggctcgct gagcctgcac ctcaaggact accgcccggg gcagtgaccc
     1681 cgcggtaggc ggccggcgcg cggtacggtc cttgtaccgc gctccgcacc atgcaccgtc
     1741 catccgctcc cgcgtcgtcc gagtccgcgc ccgcgccgct cgagcatcgc aaggtgctcg
     1801 tggcgttcag cggcctcctc ctcgtcctgc tgctcgcggc gctggactcg acgatcgtct
     1861 ccaccgcgct gccgaccatc gtcggagagc tcggagggct ggagcacctg gcgtgggtgg
     1921 tcaccgccta tctgctcgcc cagaccgtcg tcacgccggt gtacggcaag ctcggcgacc
     1981 tgtacggacg gaaggtcgtg ctccagtcgg cgatcgtcct cttcctcgcg ggatcggcgc
     2041 tgtgcggcct gagccagaac atgacgcagc tcatcgtgtt ccgcgccatc cagggcctcg
     2101 gcggcggtgg actgaacgtc accacccagg cgatcgtcgg cgacatcgtc ccgccgcgcg
     2161 agcggggcaa gtatcagggc ttcttcggcg cggtcttcgg actcgccagc atcgccggcc
     2221 cgctgctggg cgg
//
LOCUS       DASSYW010000050         4735 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_993510, whole genome shotgun sequence.
ACCESSION   DASSYW010000050 DASSYW010000000
VERSION     DASSYW010000050.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4735)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4735)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4735
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_993510"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..776
                     /locus_tag="VFN38_00835"
     CDS             <1..776
                     /locus_tag="VFN38_00835"
                     /inference="COORDINATES: protein motif:HMM:NF013703.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_function: GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HET9010321.1"
                     /translation="LGIKGAAIATTIGRSIGVLFALHRLFKVGSRVELHARHFAFDPA
                     LILRVIRLSSSATLQVFIGMASWIGLVRILATFGSAALAGYTIGIRIVIFALLPSAGL
                     ANAAATMVGQALGARKPERAERAVWTAGRYSMWFLGAVGLLFVIFAPPIVSIFTADPA
                     VARFAVATLRTVALGFPFYAYGMVFTQSFNGAGDTRTPTYINLFVFWLFEIPLAWVLA
                     NTAGFGPQGAFAAATVAFCTLAVVSAVLFRRGHWKRQRV"
     gene            1022..1579
                     /locus_tag="VFN38_00840"
     CDS             1022..1579
                     /locus_tag="VFN38_00840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010322.1"
                     /translation="MSTHSRRLLLTATAAAAVFALPTVAGAQTLEPIRVTDSRQKAEK
                     LDAEALSYEQNDWSQLKKAARLRELAANLRTEDDPEGSVSLYWAARDRYYSGDPKSAR
                     ALMEQAADRALAMGDVLNAATAYTEAAYICADIKDGERMRALVGKARLLAASPMLTDE
                     QRYQLRTRLAQRDAPVGVVAVMPNP"
     gene            complement(1638..2132)
                     /gene="paaD"
                     /locus_tag="VFN38_00845"
     CDS             complement(1638..2132)
                     /gene="paaD"
                     /locus_tag="VFN38_00845"
                     /inference="COORDINATES: protein motif:HMM:TIGR02159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010124 - phenylacetate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,2-phenylacetyl-CoA epoxidase subunit PaaD"
                     /protein_id="HET9010323.1"
                     /translation="MPATRDALLAVLDQVMDPEVPVLSVRELGIVRDVEVNDSGAVTV
                     TVTPTYSGCPAIRVIEQDILAALADAGVADARVRTTYTPAWTTDWIAPEAKAKLKAYG
                     IAPPARTEATDLVQLLRRRAAVQCPYCDSYETEVRSEFGSTACKSVCWCRSCRQPFEE
                     FKAI"
     gene            complement(2141..2902)
                     /gene="paaC"
                     /locus_tag="VFN38_00850"
     CDS             complement(2141..2902)
                     /gene="paaC"
                     /locus_tag="VFN38_00850"
                     /EC_number="1.14.13.149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010124 - phenylacetate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,2-phenylacetyl-CoA epoxidase subunit PaaC"
                     /protein_id="HET9010324.1"
                     /translation="MTNALFEYLQRLGDDRLVLGHRLSEWCGHGPILEEDIALANVAL
                     DLLGQATMLLRLAGEVEGQGRDEDALAYFREAVAFRNCQMVELPNGDFAFTIARQFLF
                     DVHAVVQLDALSTGANAELAAIAAKALKEAKYHVRHSGEWMLKLGDGTEESHRRVQRA
                     VDDLWRYTGELFAADDVDRAMHDAGIGPDLTVAHERWRSLVREVMDQATLTVPNDVPR
                     LPNTGGGRTGAHTEHLGHLLAEMQIVARSHPGATW"
     gene            complement(2899..3189)
                     /gene="paaB"
                     /locus_tag="VFN38_00855"
     CDS             complement(2899..3189)
                     /gene="paaB"
                     /locus_tag="VFN38_00855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003857353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010124 - phenylacetate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,2-phenylacetyl-CoA epoxidase subunit PaaB"
                     /protein_id="HET9010325.1"
                     /translation="MAGDSQWPVWEVFTQSAQGAPHEHAGSLHAVDAEQALQNARDVY
                     ARRGGVISLWVIPSGAITASSPGDNGPFFDPGSDKAYRHPQFYKVPRGVRGV"
     gene            complement(3242..4204)
                     /gene="paaA"
                     /locus_tag="VFN38_00860"
     CDS             complement(3242..4204)
                     /gene="paaA"
                     /locus_tag="VFN38_00860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010124 - phenylacetate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,2-phenylacetyl-CoA epoxidase subunit PaaA"
                     /protein_id="HET9010326.1"
                     /translation="MTQTPVDDATKVAAFEARIAAGESIEPKDWMPEKYRRQLVRMMS
                     QHAHSEIVGMLPEGNWITRAPSLRRKISLIAKVQDEAGHGLYIYCGTETLGVDRTELV
                     DQLLAGTAKYSSIFNYPTLSWADIGVIGWFVDGAAIVNQTILAKASYGPYARAMIRVC
                     KEENFHKRQGYEIVATLANGTPAQKAMVQDAVNRWWWPSLMMFGPSDTDSPNTAELIR
                     WKVKRKTNDELRQRFVNLTVPQATAVNLTLPDPSMKYNAETENWEFGEIDWEEFNQVI
                     RGNGPCNKERLDARRKAHDDGAWVREAASAYAAKQRARSASEAA"
     gene            complement(4282..>4735)
                     /locus_tag="VFN38_00865"
     CDS             complement(4282..>4735)
                     /locus_tag="VFN38_00865"
                     /inference="COORDINATES: protein motif:HMM:NF016993.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010124 - phenylacetate catabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="Phenylacetic acid catabolic protein"
                     /protein_id="HET9010327.1"
                     /translation="VAAFEARIAAGESIEPKDWMPERYRRQLVRMMSQHAHSEIVGML
                     PEGNWITRAPSLRRKISLIAKVQDEAGHGLYIYCGTETLGVDRAELIQQLLDGTAKYS
                     SIFNYPTLSWADIGVIGWFVDGAAIVTATSPPATAVPGMSGLVSMKQR"
BASE COUNT          694 a         1664 c         1576 g          801 t
ORIGIN      
        1 cgctcggcat caagggagcg gcgatcgcga cgacgatcgg ccggagcatc ggcgtgctgt
       61 tcgcgctgca tcgcctcttc aaggtgggct cgcgggtgga gctgcacgcg cggcacttcg
      121 cgttcgaccc cgcgctcatc ctgcgcgtca tccggctctc gtcgtcggcg acgctgcagg
      181 tgttcatcgg catggcgagc tggatcggcc tcgtccggat cctcgcgacg ttcggcagtg
      241 cggcgctcgc gggctacacg atcgggatcc gcatcgtgat cttcgcgctg ctgccgtccg
      301 ccggtctcgc gaacgcggcc gcgacgatgg tcgggcaggc gcttggcgca cgcaagccgg
      361 agcgcgcgga gcgcgccgtg tggaccgccg gccggtacag catgtggttt ctcggcgcgg
      421 tcgggctgct gttcgtgatc ttcgcgccgc cgatcgtctc gatcttcacc gccgatccgg
      481 cggtggcgcg gttcgcggtg gccacgctgc gcacggtggc gctgggattc ccgttctacg
      541 cgtacggcat ggtgttcacg caatcgttca acggcgcggg cgacacgcgc acgccgacgt
      601 acatcaacct gttcgtgttc tggctgttcg agattccgct cgcgtgggtg ctcgccaaca
      661 ccgccgggtt cggcccgcag ggggcgttcg ccgccgcgac cgtcgcgttc tgcacgctcg
      721 cggtggtgag cgcggtgctg ttccggcgcg gccactggaa gcgacagcgc gtctgatcgt
      781 ctggcgcggc aacgcacgca agcgcttcgc ctgtgacgag tcgcacgagt tccgtgacga
      841 aatgcgactc gtcacaacaa cttttcgtcg atacaaaacg cgcacaaact ttcgccaacc
      901 ttcgtcgtaa tgcctggtgt ctcactggca ttcgggtccc gacccgtctc tcgcgcacgg
      961 tgacgaatcc ttcgcaccac cagcgcagca gggccagcag caccatacca tggaggacgg
     1021 catgtccacg cactcccgca gattgctgtt gaccgccacc gccgccgccg cggtcttcgc
     1081 ccttcccacc gtcgcgggcg cacaaacgct cgagccgatc cgcgtcaccg acagccggca
     1141 gaaggcggag aagctcgacg cggaagcgtt gtcgtacgag cagaacgact ggagccagct
     1201 caagaaggcg gcacgtctcc gcgagctcgc ggcgaacctc cgcaccgaag atgatccgga
     1261 aggatcggtc agcctctact gggccgcgcg cgatcgctac tacagcgggg acccgaagtc
     1321 cgcgcgcgcg ctgatggagc aggccgccga ccgcgcgctc gcgatgggcg acgtgctgaa
     1381 cgccgccacc gcctacaccg aggcggcgta catctgcgcc gacatcaagg atggtgagcg
     1441 aatgcgcgcc ctcgtcggca aggctcgcct gctcgccgcc tccccgatgc tgaccgacga
     1501 gcagcgctat cagctccgga cgcgcctcgc gcagcgcgat gcgccggtgg gtgtggtggc
     1561 agtcatgccg aatccgtagc accgcgcggc acggacacgg aaatggggga cgcgaagcgt
     1621 tcgcgtccct cttctgctca gatggccttg aactcctcga acggctggcg gcacgatcgg
     1681 caccagcaca ccgacttgca cgccgtcgag ccgaactcgc tccgcacctc ggtctcgtac
     1741 gagtcacagt acgggcactg gaccgccgcg cgccggcgaa gcagctgcac gaggtccgtc
     1801 gcctcggtcc gtgccggtgg cgcgatcccg taggccttca gcttcgcctt cgcctctggg
     1861 gcgatccagt cggtcgtcca ggcgggcgtg tacgtcgtgc ggacacgagc atcggcaacg
     1921 ccggcgtcgg cgagcgcggc gaggatgtcc tgctcgatca cccgaatcgc cgggcagccg
     1981 gaataggtcg gcgtcaccgt caccgtcacc gcgcccgaat cgttgacctc cacgtcgcgc
     2041 acgatgccga gctcgcgcac gctcagcacg ggcacctcgg ggtccatcac ctgatcgagg
     2101 accgcgagca gggcgtcgcg cgtcgccggc acggcgcgcg ctaccacgtc gcccccgggt
     2161 gcgatcgcgc cacgatctgc atctcggcca gcaggtggcc caggtgctcg gtgtgcgcgc
     2221 cggtgcgccc gccgccggtg ttcggcaggc gcggcacgtc gttggggacg gtcaacgtcg
     2281 cctggtccat cacttcgcgg acgagcgaac gccagcgctc atgcgccacc gtcaggtccg
     2341 ggccgatccc cgcgtcgtgc attgcgcggt cgacgtcgtc ggccgcgaac agttcgccgg
     2401 tgtagcgcca gaggtcgtcc accgcccgct gcacccgacg atggctctcc tccgtgccgt
     2461 cgccgagctt gagcatccac tcaccgctgt gacggacgtg atacttcgcc tccttgagcg
     2521 ccttcgcggc gatggccgcg agctcggcat tcgcgcccgt ggacagcgcg tcgagctgca
     2581 cgacggcatg gacgtcgaac aggaactgcc gcgcgatggt gaaggcgaag tcgccgttcg
     2641 gcagctcgac catctggcag ttgcggaagg cgacggcctc ccggaagtac gcgagggcgt
     2701 cctcgtcgcg gccctgccct tccacctcgc ccgccagccg aagcagcatc gtcgcctgcc
     2761 cgagcaggtc gagcgccacg ttggcgagcg cgatgtcctc ctcgaggatg gggccgtggc
     2821 cgcaccactc gctcaggcga tggccgagca cgagccggtc gtcgcccagc cgctgcaggt
     2881 actcgaacag cgcgttcgtc atacgccgcg aacgccgcgc gggaccttgt agaactgcgg
     2941 gtgccggtac gccttgtccg agcccgggtc gaagaacggg ccgttgtccc ccgggctcga
     3001 cgccgtgatc gcgccgctcg ggatgaccca cagggagatc accccgccgc gacgcgcgta
     3061 cacgtcgcgg gcgttctgga gcgcctgctc ggcatccacc gcgtgcagcg atccggcgtg
     3121 ctcgtgcggc gcgccctgcg cgctctgcgt gaacacttcc cacaccggcc actggctgtc
     3181 gccggccatc gtcgccgcct gctcgccggc gaactgctgg ttgctcaccg tgctcgccac
     3241 gctacgccgc ctcggacgcc gacctggcgc gctgcttcgc ggcatacgcg ctcgccgcct
     3301 cccggaccca ggcgccgtcg tcgtgcgcct tgcggcgcgc gtcgagccgt tccttgttgc
     3361 acggaccgtt gccgcggatc acctggttga actcctccca gtcgatctcg ccgaactccc
     3421 agttctccgt ctccgcgttg tacttcatgg agggatcggg cagcgtgagg ttcaccgcgg
     3481 tggcctgcgg cacggtgagg ttcacgaagc gctgccggag ctcgtcgttc gtcttccgct
     3541 tcaccttcca gcggatgagc tccgccgtgt tcggcgagtc cgtgtcgctc ggaccgaaca
     3601 tcatcagcga gggccaccac caacgattca cggcgtcctg caccatggcc ttctgcgccg
     3661 gcgtgccgtt ggcgagcgtg gcgacgatct cgtatccctg acgcttgtgg aagttctctt
     3721 ccttgcagac gcgaatcatc gcgcgcgcat acgggccgta cgacgccttg gcgaggatcg
     3781 tctggttcac gatcgccgcg ccgtccacga accagccgat gacgccgatg tcggcccacg
     3841 acagcgtcgg gtagttgaag atgctcgagt acttcgccgt ccccgcgagg agctggtcca
     3901 cgagctcggt gcggtcgacg ccgagggtct cggtgccgca atagatgtag aggccgtgcc
     3961 ccgcctcatc ctgcaccttg gcgatgagcg agatcttgcg gcgcaggctc ggcgcgcgcg
     4021 tgatccagtt tccctcgggg agcatgccga cgatctccga gtgggcatgc tgggacatca
     4081 tgcggacgag ttgccggcga tacttctccg gcatccagtc cttgggctcg atgctctcgc
     4141 cggcggcgat gcgcgcctcg aaggcggcga ctttggtcgc gtcgtccaca ggtgtctgtg
     4201 tcatgggtga aatctacacc gtagcccgag aaacggacaa tttggtgtcg tcccgacaag
     4261 gcacgccatc gcctcgccac gctatctttg cttcatgctg accaggccag acatcccagg
     4321 aaccgctgtc gccggcggcg acgtcgccgt cacgatcgcc gcgccgtcca cgaaccagcc
     4381 gatgaccccg atgtccgccc acgagagggt ggggtagttg aagatgctgg agtacttggc
     4441 cgtgccgtcg agaagctgct ggatgagctc ggcgcgatcg acgccgaggg tctcggtgcc
     4501 gcagtagatg tagagtccgt gtccggcctc gtcctgcacc ttggcgatca gcgagatctt
     4561 gcggcgcagc gagggcgcgc gggtgatcca gttaccctcg ggcagcatgc cgacgatctc
     4621 ggaatgggcg tgctgggaca tcatgcggac gagctgccgg cgataccgct ccggcatcca
     4681 gtccttgggc tcgatgctct cgccggcggc gatgcgcgcc tcgaaggcgg cgacc
//
LOCUS       DASSYW010000051         4079 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1693715, whole genome shotgun sequence.
ACCESSION   DASSYW010000051 DASSYW010000000
VERSION     DASSYW010000051.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4079)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4079)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4079
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1693715"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..810
                     /locus_tag="VFN38_00870"
     CDS             <1..810
                     /locus_tag="VFN38_00870"
                     /inference="COORDINATES: protein motif:HMM:NF024874.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HET9010328.1"
                     /translation="RAQRRAMQITYIGHATLLLELAGARILTDPNFESKLGRLLPRVS
                     APGIALEALPKLDAILLTHAHADHLSFKSLDRLPSDIPLYAPPAVARWLVGKGYHHAT
                     PLDEAESVTVGAALRVHTSRATHKGHRYGFDRWRSAANMYLLESAEESAFFAGDTALT
                     PTTHHLVERVLWAQERQLDIAMLPIGYAPPWKPGFRRGHLTGEDALVLFQTLRARAML
                     PYHWGTFRHVTASAHDAIDRLRTRLVNHDAREYVHVIEPGESLTLGPAARK"
     gene            807..2192
                     /gene="mnmE"
                     /locus_tag="VFN38_00875"
     CDS             807..2192
                     /gene="mnmE"
                     /locus_tag="VFN38_00875"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF003661.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HET9010329.1"
                     /translation="MTGRGADRLRGADATSDGRTIAAIASAPGRSALASVRMSGPGVR
                     ALARALLDPVPTSARRATRCTVRGADGAALDDVVATLYVAPHSFTGEDLLELSTHGGL
                     VTPTAVLAAAIRAGAREAEPGEFTRRALLNGKLDLLQAEGVADLIDARSTAAQRAALR
                     QLDGGLSRRVAALRQRILDLEALLAYDIDFPEEDDGPVPRGRIQGTADDLSAALDALL
                     ATGEQGTLVHDGALVVLAGAPNVGKSSLFNALLGEARAIVTSVPGTTRDAIEAVLDLP
                     GWPLRLVDTAGLRDTSDEVERLGIEASSRYLGQAAVVLACGDDQRSLDAVTAVLRTHT
                     AAPIITVATKSDLLPQGHAVTADIAVSAHGGNGLRELLALVERRLAQRHGEPALDAPG
                     LTRARHQAAVAVAAEELRAFRAAWAEDAIPASVAAIHVRTAADALAELIGVVRVDEVL
                     DAVFRRFCVGK"
     gene            complement(2196..3134)
                     /locus_tag="VFN38_00880"
     CDS             complement(2196..3134)
                     /locus_tag="VFN38_00880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010330.1"
                     /translation="MLINLLPDFFAVLNSTDRVAAYQRYYNAHRRLLEPYWHNYVVDP
                     DGPHFGDVVRATALADRTDLQEMLERTDVVALARSTEQRCARLLEQDVDVDVVLMVGV
                     GAANAGELVVDGRGIAFACLEHFTSVANPDTQGLGLDPELLPLWLAHEIAHAIRYTSP
                     TSRSELRQLIDAAGGYYSYWDTGRRASLRELLVNEGLAVHASQLISPGHAAWEYFGFG
                     RRQYARVRELEAVISRAVTEDLDRAGLGLRLRYLSGGMSDEARTVDRYVLPERSGYFL
                     GARMAEAAINQRGMAWAVRASAAELAQLARAAQATA"
     gene            3383..4036
                     /locus_tag="VFN38_00885"
     CDS             3383..4036
                     /locus_tag="VFN38_00885"
                     /inference="COORDINATES: protein motif:HMM:NF021501.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2225 domain-containing protein"
                     /protein_id="HET9010331.1"
                     /translation="MTTLQLIELRCPICDTRFKSQQVISTNSFGGKRTDFHERAAGTQ
                     PLPYLIHMCSRCGYSGAERDFTDEAEVSPGLREHVWNELAPQISTAAVPGSEKYEAAA
                     KVAEWQGLDVRHVADLQLRAAWCCVDEADTEAERFFRRKAAWKFEEALASFDGVAREE
                     RAVLTYLVGELWRRVGDLHQATDWFNRVAGEINDAATQQWVLDAARQQRDCPREWFG"
BASE COUNT          615 a         1397 c         1527 g          540 t
ORIGIN      
        1 cgtgcgcaga ggagagccat gcagatcacc tacatcggac acgcgacgct gctgctggag
       61 ctggccggcg cgcggatcct caccgacccg aacttcgagt cgaagctggg ccggctgctg
      121 ccgcgcgtct ccgcgccggg catcgcgctg gaggcgctgc cgaagctcga tgcgatcctg
      181 ctgacgcacg cgcacgccga ccacctctcg ttcaagtcgc tcgaccggct gccgagcgac
      241 attccgctct acgcgccacc ggccgtggcg cgctggctcg tcggcaaggg gtaccaccac
      301 gcgacgccgc tggacgaggc cgagagcgtg accgtcggag cggcgctgcg ggtgcacacc
      361 agccgggcca cgcacaaggg acaccgctac ggcttcgacc ggtggcgcag cgcggcgaac
      421 atgtacctgc tggaatcggc ggaggagagc gccttcttcg ccggcgacac cgccctgacc
      481 ccgacgacgc atcacctcgt ggagcgcgtg ctgtgggcgc aggagcggca gctggacatc
      541 gcgatgctgc cgatcggcta cgcaccgccg tggaagccgg gcttccggcg cggccacctc
      601 acgggcgagg atgcgctggt gctcttccag accctgcgcg cgcgcgcgat gctcccgtac
      661 cactggggca ccttccgcca cgtcaccgcg agcgcgcacg acgccatcga ccgactgcgg
      721 acgcgcctgg tgaaccacga cgcgcgcgag tacgtgcacg tgatcgagcc cggcgagtcg
      781 ttgacgctgg ggcctgccgc gcgcaagtga ccggccgggg cgcggaccgc ctgcggggcg
      841 ccgacgcgac gagcgacggc cgcaccatcg cggcgatcgc cagcgctccg ggccggtcgg
      901 ccctggcgag cgtccgcatg agcgggccgg gagtgcgcgc cctggcgcgt gccctgctgg
      961 atccggtacc gacgtcggcg cgacgcgcga cccggtgcac ggtgcgcggc gcggatggcg
     1021 cggcgctgga cgacgtggtc gcgacgctct acgtcgcgcc gcactccttc acaggagagg
     1081 acctgctcga gctgagcacc cacggcgggc tcgtgacacc gacggcggtg ctggcggcgg
     1141 cgatccgggc cggcgcgcga gaagccgagc cgggcgagtt cacgcgccgc gccctcctca
     1201 acgggaagct cgacctgctc caggccgagg gggtggccga cctgatcgac gcgcgcagca
     1261 cggcggcgca gcgggcggcg ctccgccagc tcgacggcgg gctgtcgcgc cgggtcgcgg
     1321 cgctgcgcca gcggatcctc gacctcgagg cgctcctcgc ctacgacatc gacttccccg
     1381 aagaggacga tggccccgtg ccgaggggcc gcatccaggg caccgccgac gatctgagcg
     1441 cagcgctcga cgcgctgctc gcgaccggcg agcagggcac gctcgtccac gacggcgccc
     1501 tcgtcgtcct ggccggcgcg ccgaacgtcg ggaagtcctc actgttcaac gccctcctcg
     1561 gcgaggcgcg cgccatcgtc accagcgtgc cgggcacgac gcgcgacgcg atcgaagcgg
     1621 tgctcgatct cccgggctgg ccactgcggc tggtggacac cgccggcctt cgcgacacgt
     1681 ccgacgaagt ggaacggctg ggaatcgagg cgtcgagccg ctatctcggc caggccgccg
     1741 tggtgctggc ctgtggcgac gaccagcggt cactcgacgc cgtgaccgcc gtgctgcgca
     1801 cccacacggc cgcacccatc atcaccgtgg ccacgaagtc cgacctgctg ccacagggcc
     1861 acgcggtcac ggcggacatc gccgtgagcg cgcacggagg gaacgggctg cgcgagcttc
     1921 tggcgctggt ggaacgccgg ctcgcacagc gccacggtga gccggcactc gacgcgccgg
     1981 gactcacccg ggcgcggcat caggccgcgg tggcggtcgc cgcggaggag ctgcgcgcgt
     2041 tccgcgcggc gtgggccgag gacgcgattc cggcgagcgt ggccgcgatc catgtgcgaa
     2101 cggcggcgga cgcgctggcg gagctgatcg gcgtcgtccg ggtggacgag gtgctcgacg
     2161 cggtgttccg gcgcttctgc gtgggcaagt agcggctacg ccgtggcctg ggcggcacgg
     2221 gcgagctgcg cgagctcggc ggcgctggcc cggaccgccc acgccatgcc ccgctggttg
     2281 atcgccgctt cggccatccg cgcgccgagg aagtagccgc tccgctcggg gagcacgtag
     2341 cgatccacgg tgcgcgcttc gtcactcatg ccgccggaca ggtagcgcaa gcgaaggccg
     2401 agccctgcgc gatcgaggtc ctcggtgacg gcccggctga tgacagcttc gagctcgcgc
     2461 acccgcgcgt actgccgtcg gccgaatccg aaatactccc acgccgcgtg gcccgggctg
     2521 atcaactgcg acgcatgaac cgccaacccc tcgttcacca ggagctcgcg cagcgatgcg
     2581 cgacgtcccg tgtcccagta cgagtagtag ccacccgccg catcgatcag ctggcgcagc
     2641 tcgctgcggc tggtggggga ggtgtagcgg atcgcgtggg cgatctcgtg ggcgagccag
     2701 agcggcagga gctccgggtc gagtccgagg ccctgggtgt cggggttcgc taccgaggtg
     2761 aagtgctcga ggcacgcgaa ggcgatgccg cgcccatcga ccaccagctc gccggcattg
     2821 gccgcgccga cgccgaccat gagcaccacg tcgacgtcca cgtcctgttc gagcagtcgg
     2881 gcgcagcgct gttccgtgct gcgggcgagc gccacgacat cggtgcgctc gagcatctcc
     2941 tgcaggtcgg tgcgatccgc gagggcggtg gcgcgcacca catcgccgaa gtgcgggccg
     3001 tcgggatcga cgacgtagtt gtgccagtac ggctcgagga gtcggcggtg tgcgttgtag
     3061 tagcgctggt aggcggcgac gcggtcggtg ctattgagaa cggcgaagaa gtctggcagc
     3121 aggttgatca gcattcgacc gggaagcgac ctgcgagagg gcggcgggcg accgtcacgc
     3181 ggacggttgc gctggcagcg ggtgtgtttg gacgcggaat gatagcggtg gccggtgaag
     3241 cgaacaagag agggcccgcc ggcctgtcgc gggcagctgg gtgtgggccg cgagacgacg
     3301 agcccgcagc gcggtcggga cgtggcacgg tttttccttt aatgtcccgc aagcgatagc
     3361 cacggagcag gagacagggc aaatgacaac gctgcaactg atagaacttc gctgtcccat
     3421 ctgcgataca cggttcaagt cccagcaggt gatctcgacg aactcgttcg gcgggaagcg
     3481 cacggacttc catgagcgcg cagcgggaac gcagccgttg ccctacctca ttcacatgtg
     3541 cagccgctgc ggctactccg gggcggagcg cgacttcacc gacgaggcgg aggtgagccc
     3601 ggggctgcgg gagcacgtgt ggaacgagct cgcgccgcag atctcgaccg ccgcggtacc
     3661 ggggtcggag aagtacgagg cggcggccaa ggtggccgag tggcaggggc tggacgtccg
     3721 gcacgtggcc gacctgcagc tgcgcgccgc ctggtgctgc gtggacgaag ccgacaccga
     3781 ggccgagcgg ttcttccgac gcaaggcggc gtggaagttc gaggaggcgc tcgcgagctt
     3841 cgacggcgtg gcgcgcgagg agcgcgccgt gctgacctac ctcgtgggcg agctgtggcg
     3901 gcgggtcggc gacctgcacc aggccaccga ctggttcaac cgggtcgccg gcgagatcaa
     3961 cgatgcggcc acccagcagt gggtgctcga cgccgcccgc cagcagcgcg attgtccgcg
     4021 ggaatggttc ggctgaaccg cgcgggagcg gtggctggcg agggatgaag cgaagggca
//
LOCUS       DASSYW010000052         2011 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_551218, whole genome shotgun sequence.
ACCESSION   DASSYW010000052 DASSYW010000000
VERSION     DASSYW010000052.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2011)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2011)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2011
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_551218"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..785)
                     /locus_tag="VFN38_00890"
     CDS             complement(<1..785)
                     /locus_tag="VFN38_00890"
                     /inference="COORDINATES: protein motif:HMM:NF028007.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HET9010332.1"
                     /translation="MTLELRVVSGARAGATERFDGPVVSVGRHPTSDLRFDLHDDLDV
                     SARHAELRRADGAWTVHDLGSTNGTLVNGERVTSPRRLAAGDTIAFGARGPRVQVALA
                     AAAGTDTRIAAAVHRQTASLRRSMVLGAGALLALAVMGALLWQRQAARRPPEPARPAA
                     AIDLAAIHGRNDAAIAMIASDVEGTVIAGTAFGVAPAGQLVTSRHVVRSAAGRPARRI
                     RVIFANTTEWLPARLVRTSDRDDLALIQVEPPGRYPVVAALGG"
     gene            complement(782..>2011)
                     /locus_tag="VFN38_00895"
     CDS             complement(782..>2011)
                     /locus_tag="VFN38_00895"
                     /inference="COORDINATES: protein motif:HMM:NF033484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004722 - protein serine/threonine
                     phosphatase activity [Evidence IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Stp1/IreP family PP2C-type Ser/Thr phosphatase"
                     /protein_id="HET9010333.1"
                     /translation="WTASNSVKAPDPVTVPNPSGPNQSPRAAVVVHVFGRTDVGRTRE
                     HNEDAFVVADLTRGNATLQPEVRTHVVGDRGTLFMVADGMGGAAAGEIASEMAIEIVL
                     QELTTALGEQAPPSEERFATAIKRATASANSHIHTFALEHPEYRGLVTTATVAGVLGD
                     TIYVAQVGDSRAYLVRNGVGQQITKDQSLMQKLIEAGELTEAEAEQSERRNIILQALG
                     PEATIKVDLTHQRVRRGDVLVLCSDGLSGQVRADEIANIVTEETDLVAACRRLIDRAN
                     EMGGPDNITVIVARFDGEGLADPADTDAVGHRTFPLATDSGQTDAIDRPLSQVTTSEM
                     PVVRRPTRELPPDAFVLTTTIPDDNAAKRRSRGSLIALLLLIIFLGGALWWVYRTAEL
                     VVAPRQSGSPTPTKQTP"
BASE COUNT          228 a          763 c          735 g          285 t
ORIGIN      
        1 tcgccgccca gcgccgccac caccgggtag cggcccggcg gctccacctg gatgagcgcg
       61 aggtcgtcgc ggtcgctcgt gcgcaccagg cgcgcgggga gccactccgt ggtgttggcg
      121 aagatcaccc ggatgcgccg cgccggccgc cccgcggccg accgcacgac gtggcggctc
      181 gtcacgagct ggccggccgg cgccacgccg aacgcggtcc ccgcgatcac ggtgccctcc
      241 acgtcgctcg cgatcatcgc gatcgccgcg tcgttgcggc cgtggatcgc cgccaggtcg
      301 atggccgccg cggggcgcgc gggttcgggc ggccggcgcg ccgcctgccg ctgccagagc
      361 agcgccccca tcaccgcgag cgcgagcagc gcgccggcgc ccagcaccat gctccggcgc
      421 agcgaggccg tctgccggtg caccgccgcg gcgatgcgcg tgtcggtgcc cgccgccgcg
      481 gcgagcgcca cctgcacccg cgggccccgc gcgccgaagg cgatcgtgtc gcccgcggcc
      541 aggcggcgcg gcgacgtcac ccgctcgccg ttcacgagcg tcccgttcgt gctgcccagg
      601 tcgtgcaccg tccacgcgcc gtcggcgcgg cgcagctccg cgtggcgggc cgagacgtcg
      661 aggtcgtcgt ggaggtcgaa gcggaggtcg ctcgtggggt gccgccccac cgacaccacc
      721 ggcccgtcga accgctccgt cgcgccggcg cgcgcgccgc tcacgacgcg cagctcgagc
      781 gtcacggggt ctgcttcgtc ggcgtcgggg agccgctctg ccgcggggcc accaccagct
      841 cggcggtgcg gtacacccac cagagcgcgc cgccaaggaa gatgatgagc aggagcagcg
      901 cgatgagcga gccgcggctc cgccgcttcg ccgcgttgtc gtccgggatc gtcgtcgtga
      961 ggacgaacgc gtccggcggc agctcgcgcg tcgggcggcg caccaccggc atctcgctcg
     1021 tcgtcacctg gctgagcggc cggtcgatcg cgtcggtctg gccggagtcg gtggcgaggg
     1081 ggaaggtccg gtgccccacg gcgtcggtgt cggccggatc ggccagcccc tcgccgtcga
     1141 agcgcgccac gatcacggtg atgttgtcgg ggccccccat ctcgttcgcg cggtcgatca
     1201 ggcgccggca cgccgccacg aggtcggtct cctcggtgac gatgttcgcg atctcgtccg
     1261 cccgcacctg gccactcagc ccgtcgctgc acagcaccag cacgtcgccg cggcgcacgc
     1321 gctggtgggt gaggtccacc ttgatcgtcg cctcggggcc gagcgcctgg aggatgatgt
     1381 tccgccgctc gctctgctcg gcctcggcct cggtgagctc ccccgcctcg atgagcttct
     1441 gcatcagcga ctggtccttc gtgatctgct gccccacgcc gttgcgcacg agataggcgc
     1501 ggctgtcgcc cacctgcgcc acgtagatcg tgtcgcccag cacgccggcc accgtggcgg
     1561 tggtcaccaa gccgcggtac tcgggatgct ccagcgcgaa ggtgtggatg tgcgagttcg
     1621 ccgaggccgt ggcgcgcttg atcgccgtgg cgaaccgctc ctcgctgggg ggcgcctgct
     1681 cgccgagcgc cgtggtgagc tcctggagca cgatctcgat cgccatctcg ctggcgatct
     1741 ccccggccgc cgcgccgccc atcccgtccg ccaccatgaa cagggtgccg cggtcgccca
     1801 cgacgtgcgt gcgcacctcg ggctgcagcg tggcgttgcc gcgcgtgagg tcggcgacga
     1861 cgaaggcgtc ctcgttgtgc tcgcgcgtgc gtcccacgtc ggtgcggccg aagacgtgga
     1921 cgacgaccgc tgcgcgcggc gactggttcg gtcccgatgg gttgggcacg gtcacgggat
     1981 caggtgcctt cacagagttg gaggccgtcc a
//
LOCUS       DASSYW010000053         3161 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_643596, whole genome shotgun sequence.
ACCESSION   DASSYW010000053 DASSYW010000000
VERSION     DASSYW010000053.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3161)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3161)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3161
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_643596"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1019
                     /locus_tag="VFN38_00900"
     CDS             <1..1019
                     /locus_tag="VFN38_00900"
                     /inference="COORDINATES: protein motif:HMM:NF013347.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010334.1"
                     /translation="RYVAKGAPVRFRVTCRKSKLYHSDAVAERLAGALAHRVGGAPAI
                     EVLDGDETGERDEGEEGEAPAGAQLFTARFFHDRCTVSADSSGALLHLRGYRRAVGKA
                     PLRETLAAALLLGAGWDGTTPLVDPLCGSGTIAIEGALIARRMAPGARRRFAFMDWPG
                     YDEALWTGLVERARAGVLPAPPAPIFASDRDAGATAAAAANAERAGVAADIGIATQAL
                     SNAIPPEGSGPGLVAANPPYGVRVGDQDRLRNLYAQLGKLLGARFAGWRVALLSADRV
                     LEGQVGLPLAEALRTTNGGIPVRVVVGEVEEGATDVSEQADHRRGARGSTPPASAPDA
                     SQAG"
     gene            1033..1536
                     /locus_tag="VFN38_00905"
     CDS             1033..1536
                     /locus_tag="VFN38_00905"
                     /inference="COORDINATES: protein motif:HMM:NF015438.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030151 - molybdenum ion binding [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MOSC domain-containing protein"
                     /protein_id="HET9010335.1"
                     /translation="MRVAAAVRGLPVVVSLNVSQGGVPKLPIAEARVGVAGMSGDCQR
                     NLKYHGGPDRALCLFALELIEALAAEGHPIGIGTTGENVTLAGLDWAELTPGTRLRLG
                     AAVLIEVTDYTKPCRTIQDSFTGRRSGRISQKTHPGWSRVYARVLAEGVVRAGDPVVL
                     LGRKAAE"
     gene            1678..>3161
                     /locus_tag="VFN38_00910"
     CDS             1678..>3161
                     /locus_tag="VFN38_00910"
                     /inference="COORDINATES: protein motif:HMM:NF039196.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HET9010336.1"
                     /translation="MEVGNENEGGRQAAGGDDQPRGQARPSSRSARKSARGARSVRDG
                     NGDGGNGGGNGGANGGASVRTRSSRSRPARDGGDGGDGSGGGSRERGLRRLVEALRAM
                     EAGDFTIRVDLGADPLMEEVAEAFNDLAELREHMTDEIVRVSTSVGREGVMTDRANLG
                     QVGGGWARTLSSINSLVTDLVTPTTEVARVIQAVAEGDLSQKMVLQIEGKTVQGEFLR
                     IGTTVNTMVDQLSSFAAEVTRVAREVGTEGRLGGQANVPGVAGTWKDLTDNVNTLAGN
                     LTNQVRNIADVTTAVAKGDLSRKITVDARGEVLELKNTVNTMVDQLNGFASEVTRVAR
                     EVGTEGRLGGQANVPGVAGTWKDLTDNVNTLAGNLTAQVRNIAVVTTAVANGDLSQKV
                     TVDVKGEVLELKNTVNRMVDQLNAFASEVTRVAKEVGTEGELGGQAQVPGVAGTWRDL
                     TDNVNQLAGNLTVQLRDVSKVSAAIAMGDLTQKITVQAQGEILQ"
BASE COUNT          481 a         1072 c         1198 g          410 t
ORIGIN      
        1 agcgctacgt cgcgaagggg gcgccggtgc gattccgcgt cacctgccgg aagtccaagc
       61 tctatcactc ggacgccgtc gccgagcggc tcgccggcgc gctcgcccat cgggtggggg
      121 gagcgccggc gatcgaggtg ctcgacggcg acgaaaccgg ggagcgcgac gagggggagg
      181 agggggaggc gccggccggc gcgcagctct tcaccgcgcg cttcttccac gaccgctgca
      241 cggtgagcgc cgacagctcg ggggcgctcc ttcacctgcg cggctaccgc agggcggtgg
      301 gcaaggcgcc gctgcgcgag acgctcgccg ccgccctgct cctgggcgcc ggatgggacg
      361 gcacgacccc gctcgtggat ccgctctgcg gctcggggac gatcgccatc gagggagcgc
      421 tgatcgcgcg gcgcatggcg cccggcgccc ggcggcgttt cgcattcatg gactggccgg
      481 gctacgacga ggcgctctgg acggggctcg tcgagcgcgc cagggcgggg gtcctgcccg
      541 ccccgccggc gccgattttc gcctccgacc gcgacgccgg cgcgaccgcg gcggccgcgg
      601 cgaacgccga gcgggccgga gtggcggccg acatcggcat cgcgacccag gcgctctcga
      661 acgccatccc tcccgagggg tccggacccg gactcgtcgc cgccaacccg ccctacggcg
      721 tgcgggtcgg cgaccaggat cggctgcgga atctctacgc ccagctcggc aagctgctcg
      781 gcgcccgctt cgccggctgg cgcgtggcgc tcctctcggc ggaccgcgtc ctcgaagggc
      841 aggtggggct cccgctcgcc gaggcgctgc ggaccaccaa cggcggcatc ccggtgcgcg
      901 tcgtcgtcgg cgaggtggag gagggggcga cggacgtgtc ggagcaggcg gaccatcgtc
      961 gcggggcgcg gggtagcacc ccgccggctt ccgctcccga tgccagccag gccggctgag
     1021 ggaatggggg acgtgcgtgt cgcggcggcc gttcgcggac tgccggtggt cgtctcgctc
     1081 aacgtgtcgc aggggggagt gccgaagctt ccgatcgccg aggcgcgcgt tggtgtcgct
     1141 ggaatgtccg gcgactgtca gcgcaatctc aagtatcacg gcggtcccga ccgcgccctc
     1201 tgcctcttcg ccctcgagct catcgaggcg ctggcggccg aggggcaccc gatcgggatc
     1261 gggacgacgg gggagaacgt caccctggct ggcctggact gggccgagct gacgcccggc
     1321 acccggctca ggctgggcgc cgcggtgctg atcgaggtca ccgactacac gaagccctgc
     1381 cgcaccatcc aggactcgtt cactggtcgg cgctcgggcc ggatctcgca gaagacccat
     1441 cccggatgga gccgggtcta tgcgcgggtg ctcgccgagg gggtggtgcg ggccggggac
     1501 ccggtggtcc tcctcggccg gaaggcggcc gagtgagaat cgcgctttgc gcggcggtct
     1561 ttatcttgaa gtagcggctg ggattccagc tgtttgtcgt ttgttcgtgg tatgcgtcga
     1621 actgtgcggg acactgtccg tgtcgcgcca gccagtcatt acgcatggga gcctgacgtg
     1681 gaagtcggca acgagaacga gggcggccgc caggcggccg gtggggacga ccagcccaga
     1741 gggcaggccc gtccgtcgag ccgttcggcc cgcaagagcg cgcgcggcgc gcggagcgtg
     1801 cgggacggca acggcgatgg tggcaacggc ggcggcaacg gcggcgcgaa cggcggtgcc
     1861 tcggtccgca cccgctcgtc gcgcagtcgc ccggcacgcg acggcggcga tggtggcgac
     1921 ggcagcggcg gcgggagccg cgagcgtggg ctgcgccgcc tcgtcgaggc cctccgcgcg
     1981 atggaggccg gcgacttcac catacgcgtc gacctcggcg ccgaccctct gatggaggag
     2041 gtcgccgagg cgttcaacga cctcgccgag ctccgcgagc acatgaccga cgagatcgtg
     2101 cgcgtcagca cgagcgtcgg gcgcgagggg gtgatgaccg accgcgccaa cctcggtcag
     2161 gtgggcggcg gctgggcccg caccctcagc tcgatcaact ccctggtcac cgacctcgtg
     2221 acgccgacca ccgaggtcgc ccgcgtcatc caggcggtcg ccgaggggga cctgtcgcag
     2281 aagatggtgc tgcagatcga ggggaagacg gtgcagggcg agttcctgcg catcggcacg
     2341 acggtcaaca cgatggtgga ccagctctcg agcttcgcgg cggaagtcac ccgcgtggcc
     2401 cgcgaggtgg gcacggaagg acgactgggg ggccaggcca acgtgcccgg cgtcgccggc
     2461 acctggaagg acctgaccga caacgtgaac accctcgccg gcaacctgac caatcaggtc
     2521 cgtaacatcg ccgacgtcac gacggcggtc gccaagggcg acctgtcgcg caagatcacg
     2581 gtcgacgcgc gcggcgaggt gctcgagctg aagaacaccg tgaatacgat ggtggaccag
     2641 ctcaacggat tcgcctcgga agtgacgcgc gtggctcgcg aggtgggcac ggaaggacga
     2701 ctgggcggcc aggccaacgt gcccggcgtc gcgggcacgt ggaaggacct caccgacaac
     2761 gtgaacaccc tcgccggcaa cctgacggcg caggtgcgca acatcgccgt cgtcacgacg
     2821 gcggtcgcca acggcgacct cagtcagaag gtcacggtgg acgtgaaggg ggaggtgctc
     2881 gagctcaaga acaccgtcaa ccggatggtg gaccagctca acgccttcgc ctcggaagtc
     2941 acccgcgtcg ccaaggaagt gggcacggaa ggagagctcg gcggccaggc gcaggtgccc
     3001 ggcgtcgccg gcacgtggcg cgacctgacc gacaacgtca accagctggc cggcaacctg
     3061 accgtgcagc ttcgggacgt ctcgaaggtc tcggcggcga tcgcgatggg cgacctcacg
     3121 cagaagatca ccgtccaggc ccagggggag atcctccaga t
//
LOCUS       DASSYW010000054         2396 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1159133, whole genome shotgun sequence.
ACCESSION   DASSYW010000054 DASSYW010000000
VERSION     DASSYW010000054.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2396)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2396)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2396
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1159133"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1373
                     /locus_tag="VFN38_00915"
     CDS             <1..1373
                     /locus_tag="VFN38_00915"
                     /inference="COORDINATES: protein motif:HMM:NF012926.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycoside hydrolase family 15 protein"
                     /protein_id="HET9010337.1"
                     /translation="DASVDLTLTTDMRIGFEGSRAAARSTMREGDTAFVAIAWSEHPG
                     PKNFHEAFTRMDATSNYWREWVGHGEFPDHPWRSQLERSALTLKGLSYAPSGAITAAP
                     TTSLPREPGGERNWDYRYCFMRDAAFALWGSYSLGFDWEADDFFYFLADMAEGKEGLQ
                     NIYGVSGERELPERTLDNLDGYGGARPVRVGNASYEYEQHDVWGAMLDAVWLHARTRD
                     KLPERVWPIVKATVERVVEKWREPDRGIWALRGDPCHYTSSKVMCWVALDRGARLAGV
                     RQEGELQDSWEMVAGEIRQDVVDNALDDRGVFCQHYDTDALDASVLLMPLVGFLPRSD
                     TRVRKTVLAIADELTVNGVVLRQAPDEEHSSVEGEAFAVCSFWLVSALARIGETDRAR
                     DLCERMIAFASPLELFAENIDPHTGRHLGNFPHAFTHLAMVNAIQHVIASDEGAMPRE
                     DEGLTA"
     gene            complement(1389..2027)
                     /locus_tag="VFN38_00920"
     CDS             complement(1389..2027)
                     /locus_tag="VFN38_00920"
                     /inference="COORDINATES: protein motif:HMM:NF013286.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NifU family protein"
                     /protein_id="HET9010338.1"
                     /translation="MSSDPADTPPLAITGKAHAKVEGFRAGVPDPEAQAMWVEITGVS
                     GGDFTYNMSLKPVAAAGPEDSVQEHDGLKIVVPAKDVENVRGATIDWSDDLMRGGLML
                     VNPNTPSPAMGARPPADLSGDVAQRVKQVLDQQINPAIAMHGGSAELVAVEEETAYLR
                     LGGGCVGCGMASVTLSQGIEVAILEAVPEIEEVVDVTDHASGTNPYFEAAKK"
     gene            2049..>2396
                     /locus_tag="VFN38_00925"
     CDS             2049..>2396
                     /locus_tag="VFN38_00925"
                     /inference="COORDINATES: protein motif:HMM:NF037047.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010339.1"
                     /translation="MPRVLLVLPSATYRAPDFLAAAAKLGVEVVVASEHRQAMSREMG
                     DRALTIPLRQPEMAADAIVELAGRSPIDAIVAVDDGGTRAAAVASERLGLRGNPPAAV
                     AAARDKAAMRAAFE"
BASE COUNT          320 a          858 c          871 g          347 t
ORIGIN      
        1 aggacgcgag cgtggacctc acgctcacga cggacatgcg gatcggcttc gagggctcgc
       61 gcgcggccgc ccgctccacg atgcgcgagg gcgacaccgc gttcgtcgcg atcgcgtggt
      121 ccgagcaccc agggccgaag aacttccacg aggcgttcac gcgcatggac gcgacgtcga
      181 actactggcg cgagtgggtc ggccacggcg agttccccga ccacccgtgg cgctcgcagc
      241 tcgagcgcag cgcgctgacg ctcaaggggc tgtcgtacgc gccgagcggc gcgatcacgg
      301 cggcgcccac cacctcgctc ccgcgcgagc ccggcggcga gcgcaactgg gattaccgct
      361 actgcttcat gcgcgacgcc gcgttcgcgc tgtggggctc ctacagcctc ggcttcgact
      421 gggaggccga cgacttcttc tacttcctcg ccgacatggc cgagggcaag gagggcctcc
      481 agaacatcta cggcgtgagc ggcgagcgcg agctgccgga gcgcacgctc gacaacctcg
      541 acggctacgg cggcgcccgg ccggtgcgcg tgggcaacgc ctcctacgag tacgagcagc
      601 acgacgtgtg gggcgcgatg ctggacgccg tctggctgca cgcgcgcacg cgcgacaagc
      661 tgcccgagcg cgtctggccg atcgtgaagg ccaccgtcga gcgggtggtg gagaagtggc
      721 gcgagcccga ccgcggcatc tgggcgctgc gcggcgaccc gtgccactac acctcgtcga
      781 aggtgatgtg ctgggtggcg ctcgaccgcg gcgcgaggct ggccggcgtg cgccaggagg
      841 gcgagctcca ggactcgtgg gagatggtgg cgggggagat ccgccaggac gtggtggaca
      901 acgcgctcga cgaccgcggc gtgttctgcc agcactacga caccgacgcg ctcgacgcgt
      961 cggtgctgct gatgccgctg gtgggcttcc ttccccgcag cgacacccgc gtgcgcaaga
     1021 cggtgctcgc catcgccgac gagctcaccg tcaacggcgt cgtgctccgc caggctcccg
     1081 acgaggagca ctcgtcggtg gagggcgagg cgttcgcggt gtgctcgttc tggctcgtgt
     1141 cggcgctcgc gcggatcggc gagaccgacc gcgcgcgcga cctgtgcgag cggatgatcg
     1201 ccttcgccag cccgctcgag ctgttcgccg agaacatcga cccgcacacg gggcgccacc
     1261 tcggcaactt cccgcacgcg ttcacgcacc tcgcgatggt gaacgcgatc cagcacgtga
     1321 tcgcctccga cgagggcgcg atgccgcgcg aggacgaggg cctgacggct tagggcccgg
     1381 cggcccggct acttcttggc ggcctcgaag tacgggttgg tgccgctggc gtggtcggtc
     1441 acgtccacga cctcctcgat ctccggcacc gcctcgagga tcgccacttc gatgccctgg
     1501 ctgagcgtca cgctcgccat cccgcagccc acgcagccgc cgcccagccg caggtaggcg
     1561 gtctcctcct cgacggccac gagctcggcg ctgccgccgt gcatcgcgat cgcggggttg
     1621 atctgctggt cgagcacctg cttcacgcgc tgggccacgt cgccgctgag gtcggcgggg
     1681 ggccgggcgc ccatcgcggg gctcggcgtg ttcgggttca cgagcatcag cccgccgcgc
     1741 atgaggtcgt cggaccagtc gatcgtggcg ccgcggacgt tctcgacgtc cttcgcgggc
     1801 acgacgatct tgagaccgtc gtgctcctgc acggagtcct ccgggcccgc ggccgcgacc
     1861 ggcttcagcg acatgttgta ggtgaagtcg ccgcccgaga cgcccgtgat ctccacccac
     1921 atcgcctggg cctccggatc ggggacgccc gcgcggaatc cctccacctt ggcgtgcgcc
     1981 ttgccggtga tcgcgagcgg cggtgtgtcg gccggatcgg agctcactgc ccgacctacg
     2041 atacccctgt gccgcgcgtg cttctcgtct tgccgagtgc cacctaccgc gcgcccgatt
     2101 tcctcgccgc ggcggcgaag ctcggcgtgg aggtggtggt ggcctccgag caccgccagg
     2161 cgatgtcgcg cgagatgggc gatcgcgcgc tcaccatccc cctgcggcag cccgagatgg
     2221 ccgccgacgc gatcgtggag ctggccgggc gctcgcccat cgacgccatc gtggcggtgg
     2281 acgacggcgg cacgcgcgcg gcggcggtgg cgtcggagcg gctcgggctg cgcggcaacc
     2341 cgccggcggc ggtggcggcc gcgcgcgaca aggccgcgat gcgggcggcg ttcgag
//
LOCUS       DASSYW010000055         2105 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1177293, whole genome shotgun sequence.
ACCESSION   DASSYW010000055 DASSYW010000000
VERSION     DASSYW010000055.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2105)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2105)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2105
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1177293"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..776)
                     /locus_tag="VFN38_00930"
     CDS             complement(<1..776)
                     /locus_tag="VFN38_00930"
                     /inference="COORDINATES: protein motif:HMM:NF025086.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4159 domain-containing protein"
                     /protein_id="HET9010340.1"
                     /translation="MLKRLLPVVLLLSAGYAYAQFPRDFFGGYGTLRGEQGDPAELPP
                     AVMPDRHVAGCHILYNSVRREANGNGWRTDYPWGQRNLLTRLSELTKTRISTENGVPH
                     VYLVRLTDPALFQCSFLMASDVGTMGMSDQEAAALRQYLLKGGFLWVDDFWGEAAWTH
                     WTTQLAKALPPPEYTIEDVPLDDPIFRSMIEVKRVPQVSGIGFWRATGGRVTSERGEE
                     TAVPHLRAMRDRHGRIMAVMTFNTDVTNSWERETEDPAYFL"
     gene            complement(824..>2105)
                     /locus_tag="VFN38_00935"
     CDS             complement(824..>2105)
                     /locus_tag="VFN38_00935"
                     /inference="COORDINATES: protein motif:HMM:NF019325.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="CARDB domain-containing protein"
                     /protein_id="HET9010341.1"
                     /translation="NSSFDASDVFIGSRSVPRLLPGETNAGSTTLRIPVTTVTGTYYV
                     LVRSDWDAQVPENVETNNVKASGSIKIGPDLAVSALTVPASAAAGVAFSITETTLNQG
                     GGRAAATTTRFFLSTNSSLDPADVLLGSRDVQELAAGASSAGSTSVTVPASTPGGSYY
                     VIASADAPKTLAETNEANNTRSGSLKVGADLVVSALGVPSSAAFASTISVTDTTKNQG
                     AGPAAPSSTVFYLSDDALLDAADVFLGARPVADMAAGAVSGGSTQLQVPAGTVAGIYY
                     IVAKADGADAVPEGVESNNTRAASIKIGPDLAVSALTGPSSASAGGSVVVTDTTKNQG
                     TDPVGTPSTTRFYLSANSSLGAGDVPIGSRTVGPLAVNGIDTGSATLMIPAQTVPGSY
                     YIVAVADGDGAVPESLENNNTRPRSISISAPAGP"
BASE COUNT          308 a          739 c          712 g          346 t
ORIGIN      
        1 aggaagtacg ccggatcttc cgtttcacgc tcccacgaat tggtcacgtc ggtgttgaac
       61 gtcatcacgg ccatgatgcg gccgtggcga tcgcgcatcg cgcgcaggtg cggcaccgcg
      121 gtctcctcgc cccgctcgga cgtgacgcgc ccgccggtgg cacgccagaa cccgatgccg
      181 ctcacctgcg ggacgcgctt cacctcgatc atcgaacgga agatcggatc gtcgagcggc
      241 acgtcttcga tcgtgtactc gggcggcggc agcgccttgg ccagctgcgt cgtccagtgc
      301 gtccacgccg cttcacccca gaagtcgtcc acccacagga aaccgccctt cagcagatac
      361 tgccgcagcg ccgccgcctc ctggtcgctc atacccatcg tgccgacatc cgacgccatc
      421 aggaacgagc actggaagag cgcgggatcg gtgaggcgca cgaggtacac gtgcggcacg
      481 ccgttctccg tgctgatgcg cgtcttggtc agctccgaga gccgggtgag aagattgcgc
      541 tggccccagg gatagtcggt gcgccagccg ttgccgttgg cctcgcgccg gacgctgttg
      601 tacagaatgt ggcagccggc cacgtgccga tccggcatca ccgccggcgg cagttcggcc
      661 gggtcaccct gttcgccgcg cagcgtcccg tagccgccga aaaaatcccg cggaaactgg
      721 gcataggcgt agccggccga caggagcagc acgaccggca gcaggcgttt cagcaccggt
      781 cacacgattc cctatcgcgg cgggctttgc aagcccgccg acgtcacggt ccggccgggg
      841 ctgatatcga gatgcttcgc ggtcgcgtgt tgttgttctc gagcgattcg ggaaccgcgc
      901 cgtcgccgtc ggccaccgcc acgatgtaat agctccccgg caccgtctgc gccgggatca
      961 tcagcgtggc cgatccggtg tcgatcccgt tcaccgccag cggaccgacg gtccggcttc
     1021 cgatcggcac gtcgcccgcg ccaagcgacg agttcgccga cagatagaac cgcgtcgtcg
     1081 acggcgtccc aaccgggtcc gttccctggt tcttcgtcgt gtcggtcacg acgacgctgc
     1141 ctccggcgct cgcggaggag gggccggtga gcgccgacac ggcgaggtcc ggtccgatct
     1201 tgatgctcgc ggcgcgcgtg ttgttcgact ccacgccttc cggcacggcg tcggccccgt
     1261 ctgccttggc cacgatgtag tagatgccgg cgaccgtgcc ggccggaacc tgcagctggg
     1321 tcgacccgcc ggacacggcg ccggcggcca tgtcggcgac cggccgcgcg cccagaaaga
     1381 cgtcggccgc gtccagcagc gcgtcgtccg acaggtagaa cacggtggat gacggagccg
     1441 cgggaccggc cccctggttc ttcgtggtgt cggtcacgct gatggtgctg gcgaacgcgg
     1501 cgctcgacgg cacgccgagg gcgcttacca ccaggtccgc gccgaccttg agcgacccac
     1561 tccgggtgtt gttcgcctcg ttggtttccg ccagcgtctt cggcgcgtcc gccgaggcga
     1621 tcacgtagta cgagccgccg ggcgtcgacg caggtaccgt cacgctcgtg ctgccggcgc
     1681 tcgacgcgcc cgccgccagt tcctgcacgt cgcggctgcc gaggagtacg tcggccgggt
     1741 cgagcgacga gttcgtggac aggaagaagc gcgtggtcgt ggcggcggcg cgcccaccgc
     1801 cctggttcag cgtggtctcg gtgatgctga acgccacgcc ggcggcggcg ctggccggaa
     1861 cggtcagcgc agacaccgcc aggtccggac cgatcttgat gctgccgctc gccttgacgt
     1921 tgttggtctc cacgttctcc ggcacctggg cgtcccagtc gctcctcacc agcacgtagt
     1981 acgtcccggt gacggtggtc acgggaatgc ggagcgtcgt cgatccggcg ttcgtctcac
     2041 ccggcagcag gcgcggcacc gaacggctgc cgatgaaaac gtcggacgcg tcgaagctgc
     2101 tgttc
//
LOCUS       DASSYW010000056         4027 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1159130, whole genome shotgun sequence.
ACCESSION   DASSYW010000056 DASSYW010000000
VERSION     DASSYW010000056.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4027)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4027
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1159130"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..512)
                     /locus_tag="VFN38_00940"
     CDS             complement(<1..512)
                     /locus_tag="VFN38_00940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010342.1"
                     /translation="MPDFRVLALTDSFHAEWAGLAAAHGFALVHASEPGALEPRRASV
                     TVVSAAGDEALLEGALRHLPRDVRFVAAIGAVADHRLAAAVVRAGADDYFALPQDLPH
                     LTSWLRESAARIKADSDASAFANAERAKLHFDGILGDSPALHAALDRAARVIPRPSVT
                     VLITGETGTG"
     gene            969..1412
                     /locus_tag="VFN38_00945"
     CDS             969..1412
                     /locus_tag="VFN38_00945"
                     /inference="COORDINATES: protein motif:HMM:NF025887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HET9010343.1"
                     /translation="MRRASWLFLPLALVALGLPSRAPAQSRDDLAKFSARETALWASV
                     KDKDLDAMRKVFDKGYVAVYDAGILGLTEELDGVSKTTMRSYQLFDLAVRRVDSQNML
                     VTYKVTVDADMGTKPFSGTYNSLTLWHRSGNRWYVAAHSEVKAAP"
     gene            complement(1441..3498)
                     /locus_tag="VFN38_00950"
     CDS             complement(1441..3498)
                     /locus_tag="VFN38_00950"
                     /inference="COORDINATES: protein motif:HMM:NF015168.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HET9010344.1"
                     /translation="MANHLATETSPYLLQHAHNPVDWWPWGDAALARARDEKRPILLS
                     IGYAACHWCHVMERESFEDDATAALMNEHFVCIKVDREERPDLDAIYMQATQAMTGHG
                     GWPMTVFLTPQGEPFYAGTYFPPDDRHGMPSFRRVLQGVADAWANKQESVTKTTASMR
                     DLYAASTERTRVTGALDEALLSRVMSALVQRYEPRFGGFDGAPKFPPTMTLDFLLRQW
                     ARTGEAQALEMATHTMRCMARGGIYDQVGGGFARYAVDARWLVPHFEKMLYDNALLVR
                     LGASLWQATRDLEFRRVTEETIGWLAREMTSPEGGFYSSLDADSEGHEGRYYVWESRE
                     LDALLGEDAALVKAYWGVTADGNFEGRNILSVPREPAEVAAEQHVTVPELRTAVDRAI
                     RILYDAREKRVRPARDEKVLAGWNGLMLRGLAEAARAFGDAELRALAIRNGEFLFREL
                     VREDRVLRSYKAGVAKIPGFLEDYAAVALGAYALYQLTFHREWLERARRLADQIVARF
                     WDEEAQAFFDTASDAEPLVTRPRDVTDNAVPSGSSLAAELLLLLGDLFARGEYTSRAR
                     YVLETQAEPMARYPTAFGHALGAADMAVRGAVEVAIAGDPGDGAFGSLAREVANRYLP
                     ALVLAGGEGKGADGIALLERRGGVEPVAYVCRAYACDAPTEDPAVLGRQLDALRPTVN
                     GER"
     gene            3612..>4027
                     /locus_tag="VFN38_00955"
     CDS             3612..>4027
                     /locus_tag="VFN38_00955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010345.1"
                     /translation="MPRDAASRDRKSPSYAAAALARLRPLRPWWAPLTLLALVLGSAP
                     FAIPPIRDAASLGPVTEAALGRPAAYVLLAPFSNVLDLLTLLSVRQHIALLVTLMLGY
                     ALWWWGRGRVMPPTVVSPARRAARVASRLGLALLAV"
BASE COUNT          536 a         1486 c         1427 g          578 t
ORIGIN      
        1 ttgccggtgc cggtctcgcc ggtgatgagc accgtgacgc tggggcgcgg gatgacgcgc
       61 gcggcgcggt cgagcgcggc gtggagcgcg gggctgtcgc cgaggatgcc gtcgaagtgg
      121 agcttcgcgc gctcggcgtt cgcgaaggcc gacgcgtcgg agtccgcctt gatgcgcgcc
      181 gcgctctctc gcagccacga agtgaggtgc ggcaggtcct gcggcagcgc gaagtagtcg
      241 tcggcgccgg cgcgcaccac ggcggcggcg agccggtgat ccgccaccgc gccgatggcc
      301 gcgacgaagc gcacgtcgcg cggcaggtgc cggagcgcgc cctcgaggag cgcctcgtcg
      361 ccggcggccg acaccaccgt caccgacgcg cggcgcggct cgagcgcgcc cggctccgag
      421 gcgtgcacga gcgcgaagcc gtgtgccgcg gccaggcccg cccactcggc gtgaaaggag
      481 tcggtgagcg ccagtactcg gaagtcgggc aagcgcggtg ggagtggcga gagggagagc
      541 tgagcggcgg gccagctccc aacattcacc ggggaggggc tgccggccaa tcgcatcgac
      601 tgcactccat gctcgctgga cgacccggat cgctcgatct cctctccttc cgggcaggta
      661 gggtgccgca gccggctctg cgggagacca cggacaaagt atgccgtgcc aacgggttac
      721 ctcacagctt cccggggtgg ccgacgccgc cccgtatcga aacgttacgg cggcgtatcg
      781 gcgcgtggcg acgaccgcgc ctctcggccg gccgcgtccg gagatcgggg acgcgcgatc
      841 gggagcgacg accccggggc cgcccgagat cgggcccgcc gtcgccgact cggaggcccc
      901 ggcgcggcgc gtttgcatgc ggtgccggga gtccctatgg ttgagcccca cttcacagga
      961 gccccacgat gcgtcgcgcc tcttggctgt tcctacccct cgccctcgtc gcgctcggcc
     1021 tcccctcccg cgcccccgcc cagtcgcggg acgacctcgc gaagttcagc gcccgcgaga
     1081 cggccctctg ggcgagcgtg aaggacaagg atctcgacgc gatgcggaag gtgttcgaca
     1141 agggctacgt cgccgtctac gacgccggca tccttggcct caccgaggag ctcgacggcg
     1201 tgtcgaagac gacgatgcgc tcctaccagc tgttcgatct cgcggtgcgc cgcgtggaca
     1261 gccagaacat gctcgtcacg tacaaggtca ccgtggacgc cgacatgggg acgaagccgt
     1321 tctccggcac ctacaacagc ctcacgctct ggcaccggag cgggaaccgg tggtacgtgg
     1381 cggcgcacag cgaggtgaag gccgcgccgt gaccgcggca gaccgctgac ggctgacggt
     1441 tcaccgttca ccgttcaccg tcggccgcag cgcgtccagc tgccgtccca gcaccgccgg
     1501 gtcctcggtg ggcgcgtcgc aggcatacgc gcggcacacg tacgccaccg gctccacccc
     1561 gccgcggcgt tccagcaggg cgatcccgtc ggcgcccttg ccctcgccgc cggcgagcac
     1621 cagcgcgggc aggtaccggt tcgccacctc gcgcgcgagc gacccgaacg caccgtcgcc
     1681 cggatcgccg gcgatggcca cctccacggc gccgcggacc gccatgtccg cggcaccgag
     1741 cgcgtggccg aacgccgtgg ggtagcgcgc catcggctcg gcctgggtct ccagcacgta
     1801 ccgcgcgcgc gaggtgtact cgccgcgcgc gaacaggtcg ccgagcagca ggagcagctc
     1861 ggccgcgagc gagctgccgc tgggcaccgc gttgtcggtc acgtcgcgcg ggcgcgtcac
     1921 gagcggctcg gcgtcgctgg ccgtgtcgaa gaacgcctgc gcctcctcgt cccagaagcg
     1981 cgccacgatc tggtcggcga ggcggcgcgc ccgctcgagc cactcgcgat gaaaggtgag
     2041 ctgatacagt gcgtacgccc cgagcgcgac cgcggcgtag tcctcgagga agccgggaat
     2101 cttcgccacg cccgccttgt acgagcgcag cacccggtcc tcgcgcacca gctcgcggaa
     2161 gaggaactcg ccgttcctga tcgccagcgc gcgcagctcg gcgtcgccga aggcgcgcgc
     2221 cgcctcggcc agcccgcgca gcatcagccc gttccagccg gcgaggacct tctcgtcgcg
     2281 cgccggccgc acgcgcttct cgcgcgcgtc gtacaggatg cggatcgcgc ggtccaccgc
     2341 cgtgcgcagc tcgggcacgg tgacgtgctg ctccgccgcg acctccgccg gctcgcgcgg
     2401 cacggagagg atgttgcgcc cttcgaagtt gccgtcggcg gtgacgcccc agtacgcctt
     2461 caccagcgcc gcgtcctcgc cgagcagggc atccagctcg cgggactccc agacgtagta
     2521 gcgtccctcg tggccttcgc tgtccgcgtc gagcgacgaa tagaagcccc cttccggcga
     2581 cgtcatctcg cgcgcgagcc agccgatcgt ctcctcggtg acgcggcgga actcgaggtc
     2641 gcgcgtcgcc tgccagaggc tggcgccgag gcgcacgagc agcgcgttgt cgtagagcat
     2701 cttctcgaag tggggcacga gccagcgggc gtccacggcg tagcgcgcga acccgccccc
     2761 cacctggtcg tagatcccgc cgcgcgccat gcaccgcatg gtgtgcgtcg ccatctccag
     2821 cgcctgcgcc tcgccggtgc gcgcccactg ccggagcagg aagtcgagcg tcatcgtggg
     2881 cgggaacttc ggcgcgccgt cgaagccgcc gaagcgcggc tcgtagcgct gcaccagcgc
     2941 cgacatcacg cgcgagagca gcgcctcgtc cagcgcgccg gtgacgcgcg tgcgttccgt
     3001 gctcgcggca tacaggtcgc gcatgctcgc cgtcgtcttg gtgacgctct cctgcttgtt
     3061 cgcccacgcg tcggccaccc cctggaggac gcgcctgaag ctcggcatcc cgtggcggtc
     3121 gtcggggggg aagtaggtgc cggcgtagaa gggctcgccc tggggggtga ggaacaccgt
     3181 catcggccag ccgccgtgtc ccgtcatcgc ctgggtcgcc tgcatgtaga tggcgtccag
     3241 gtcgggccgc tcctcgcggt ccaccttgat gcacacgaag tgctcgttca tcagggcggc
     3301 cgtggcgtcg tcctcgaacg actcccgctc catcacgtgg caccagtggc aggccgcgta
     3361 gccgatgctc agcaggatgg gacgcttctc gtcccgtgcc cgggccaggg cggcatcgcc
     3421 ccacggccac cagtcgaccg ggttgtgcgc gtgctgaagg agataggggc tggtctcggt
     3481 ggcgaggtgg ttggccacgg cgggcgctgg ggctggggtc gtgaagaatg cggacgcccg
     3541 gacgggcgac tatgtttttt ttggcgcggc agctctcccg cgcgaacttc attccactca
     3601 agagtagcct ggtgcctcgc gacgccgcct cccgggaccg gaaatccccc tcgtacgccg
     3661 ccgccgcgct cgcacggctg cgtccgttgc gcccctggtg ggcgccactg accctcctcg
     3721 cgctcgtcct cggcagcgcg cccttcgcca tcccgcccat ccgcgacgcg gcctcgctgg
     3781 gacccgtcac cgaagcggcg ctcggccggc cggcagccta cgtgctgctg gcgccgttct
     3841 ccaacgtgct cgatctcctc accctgctca gtgtgcggca gcacatcgcg ctactggtga
     3901 cgctgatgct cggctatgcc ctctggtggt gggggcgggg gcgggtgatg ccgcccaccg
     3961 tggtgtcgcc cgcgcggcgc gcggcgcgcg tcgcatcgcg gctcggcctc gcgctgctcg
     4021 ccgtcat
//
LOCUS       DASSYW010000057         2029 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_938359, whole genome shotgun sequence.
ACCESSION   DASSYW010000057 DASSYW010000000
VERSION     DASSYW010000057.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2029
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_938359"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(97..1155)
                     /locus_tag="VFN38_00960"
     CDS             complement(97..1155)
                     /locus_tag="VFN38_00960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HET9010346.1"
                     /translation="MAASDAEAVHAHLLHGQVIPAHPLALTARRTLDERHQRALTRYY
                     VDAGAGGIAVGVHTTQFAIRDPRHALYRPVLELAAETARAANEGRHTPFALVAGAVGD
                     TRQAVAEAETAAALGYDLVLLGLGAMAAANDAELIRHCRAVAEVLPLFGFYLQPAVGG
                     RVLGYSFWRAFAEIPNAWAIKIAPFNRYRTLDVVRAVADSGRRDLALYTGNDDSIIVD
                     LLTPFPGRSPRDAKQRIVGGLLGQWAVWTRSAVQLLERAHGARERALEPSWMEEAAAL
                     TDANAAIFDAAHDFAGCIPGIHEVLRRQGLLKGTWCLDPAESLSPGQSDEIDRACRAY
                     PHLADDAFVREHLERWLA"
     gene            complement(1142..>2029)
                     /locus_tag="VFN38_00965"
     CDS             complement(1142..>2029)
                     /locus_tag="VFN38_00965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010347.1"
                     /translation="SLARMAKRADPARRVIAVSRWTNHAAELALQALGVDTLRADLRD
                     PRALAQLPNAPNIVFMAGQKFGTSGNPATTWAMNAGVPAFVAERYAGARIAAFSTGNV
                     YPLTPPARGGSVETDDPAPVGEYAYSCLARERLFAAGSIRHGTLVSLVRLNYAHDLRY
                     GVLTDLAMRIAARQPVSLAMGHVNVIWQGDANAYALASLAHASAPDPFVVNVAGPDTL
                     RVADLASALAARLGIEPVFADTEAPDALLSRSTRMRELLDQPLLPLDTLLDWVADWVA
                     RGGPLLNKPTGFEKRDGRF"
BASE COUNT          292 a          689 c          772 g          276 t
ORIGIN      
        1 gcgaggtggc gaaccggccg gacgagcgga tgaacggctg acgagcgtgc gggtccgtgg
       61 ggcgcgctac cgccggcgac cggcgtcgtc ctcacctcat gccagccacc gctcgaggtg
      121 ctcccgcacg aaggcatcgt cggcaaggtg cgggtaggcg cggcaggcgc ggtcgatctc
      181 gtccgactgt cccggcgaga gcgactcggc ggggtcgagg caccacgtgc ccttcagcag
      241 gccctggcgc cgcagcacct cgtggatgcc ggggatgcat cccgcgaagt cgtgcgccgc
      301 gtcgaagatc gccgcgttcg catcggtgag cgcggctgcc tcctccatcc acgatggctc
      361 cagcgcgcgt tcacgcgcgc cgtgcgcgcg ctcgagcaat tgcaccgcgg agcgcgtcca
      421 gaccgcccat tggccgagca ggccgccgac gatgcgctgc ttcgcgtcgc gtggcgaccg
      481 tccggggaag ggggtcagga gatcgacgat gatgctgtcg tcgtttcccg tgtacaacgc
      541 gaggtcccgc cgtcccgaat cggcgaccgc gcggacgacg tcgagggtgc gatagcggtt
      601 gaagggcgcg atcttgatcg cccacgcgtt cgggatctcg gcgaaggcgc gccagaacga
      661 gtagcccagc actcggccac cgacggcggg ctgaaggtag aagccgaaca gcggcagcac
      721 ctccgccacg gcgcgacaat gccggatcag ctccgcgtcg ttcgcggcgg ccatcgcgcc
      781 cagtcccagc agcacgaggt cgtagccgag tgcggcggcg gtctcggctt cggccacggc
      841 ctggcgcgtg tcgccgacgg cgccggcgac cagcgcgaac ggtgtgtggc ggccctcgtt
      901 cgccgctcgc gccgtctctg cggccagctc aaggaccggt cgatagagtg cgtgtcgcgg
      961 gtcgcgaatg gcgaactgcg tcgtatgcac gccgaccgcg atcccgcccg ccccggcgtc
     1021 cacgtagtag cgcgtgagcg cgcgctgatg gcgctcgtcg agcgtgcgtc gcgccgtcag
     1081 cgccagcgga tgcgccggga tgacctgacc gtggagcagg tgcgcgtgca cggcctcggc
     1141 gtcagaagcg gccatcgcgc ttctcgaaac cggtgggctt gttgaggagc gggccgccgc
     1201 gcgcgaccca gtcggcgacc cagtcgagca gcgtgtcgag cggcaggagc ggctggtcga
     1261 gcagctcgcg catgcgcgtg ctgcgactga gcagggcgtc cggcgcttcc gtgtcggcga
     1321 agaccggctc gatgccgagc cgcgccgcca gtgcgctggc gagatcggcg actctcagcg
     1381 tgtcgggccc ggcgacgttg acgacgaacg ggtcgggcgc ggacgcatgc gcgagcgagg
     1441 cgagcgcgta ggcgttcgcg tcgccctgcc agatgacgtt cacgtggccc atcgcgaggc
     1501 tcaccggctg acgcgcggcg atacgcatcg cgaggtcggt gagcacgccg tagcgcaggt
     1561 cgtgcgcgta gttcaaccgc acgagcgaga cgagggtgcc gtgccggatc gatcccgcgg
     1621 cgaacagccg ctcccgcgcg aggcaggaat aggcgtactc gccgacgggt gccgggtcgt
     1681 cggtctccac cgatccgccg cgcgcaggcg gcgtgagcgg atacacgttg ccggtggaga
     1741 aggcggcgat gcgggcgccg gcgtagcgct ccgccacgaa cgccggcacg cccgcgttca
     1801 tagcccaggt cgtggcggga ttacccgacg tgccgaactt ctggcccgcc atgaagacga
     1861 tgttcggcgc gttggggagc tgggcgagcg cgcgcgggtc gcgcaggtcg gcacgcagcg
     1921 tgtccacgcc gagcgcctgg agggcaagct cggccgcatg gttcgtccag cgtgagacgg
     1981 cgatcacgcg gcgcgccgga tcggcgcgct tcgccatgcg tgcgagcga
//
LOCUS       DASSYW010000058         2029 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_256390, whole genome shotgun sequence.
ACCESSION   DASSYW010000058 DASSYW010000000
VERSION     DASSYW010000058.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2029
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_256390"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1933
                     /locus_tag="VFN38_00970"
     CDS             <1..1933
                     /locus_tag="VFN38_00970"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HET9010348.1"
                     /translation="DLYLLRTVTDPQISPDGAWVAYAVATADSAKDKSDTDVWMTSWD
                     GTQTIRLTSSPESESTPRWSPDNRHLAFVSGRQDGKGGQVWLLDRRGGEAQRLTMLKG
                     GIDDFAWSPDSRRLVLVLDEETDSIARKDTAEKKTPKPIVIDRYNFKRDIAGYLGTKR
                     THLALFDVAAKKLDTLTSERNDDASPSWSPDGTRIAFVRETPAEPGKARDTDVYVIDA
                     RPGARAVPLTTFDGPDGGRPAWSADGRWIAFTRGDEPRFSAYHLNKLAVVPSDGSAPA
                     RVVTGALDRPVSSIRFAADGRSVFATIADDRAEPLVRIRVADGALERLVDGRRVVGSY
                     SAIADGRAALLLSTPDRAPEVFARDAGGELRQLSHANDSLFAQLQLGTVTDFTSRSDD
                     GTEVHSLLYRPATAPVGRLPLVVYVHGGPNGQDAYRFDFDRQLFAANGYAVLAVNYRG
                     SSGRGSAYQKAIFADWGNKEVKDLLGAVDEAVRQGLADPDRLGIGGWSYGGILTDYTI
                     ATTPRFKAAVSGAGSALQLSMYGTDQYIAQYDLEIGTPWQAQDRWIRISYPFFHADRI
                     RTPTLFMGGQSDFNVPIIGGEQMYQALRTLGVETQLVIYPNQFHGITMPSYRVDRLKR
                     YLAWYDRFLKAPVATANVP"
BASE COUNT          330 a          700 c          702 g          297 t
ORIGIN      
        1 cgacctctac ctgctccgca cggtcaccga cccacagatt tcgcccgacg gcgcgtgggt
       61 cgcctacgcg gtcgccaccg ccgactcggc gaaggacaag tcggacaccg acgtctggat
      121 gacgagctgg gatggcacgc agaccatccg gctcacgtcg tcgccggaaa gcgagagcac
      181 gccgcgctgg agcccggaca accgccatct cgcgttcgtg tcggggcggc aggacgggaa
      241 aggcggccag gtgtggctgc tggatcgccg gggcggcgag gcgcagcgcc tcacgatgct
      301 caagggcggc atcgacgact tcgcctggtc gcccgattcc cggcggctgg tgctcgtgct
      361 cgacgaagag acggactcga tcgcgcggaa ggacacggcg gagaagaaga cgccgaagcc
      421 gatcgtgatc gaccggtaca atttcaagcg tgacatcgcc ggctatctcg gcaccaagcg
      481 cacgcacctc gccctgttcg acgtggcggc gaagaagctg gacacgctca ccagcgagcg
      541 gaacgacgac gcgtcgccga gctggtcgcc cgacggcacg cgcatcgcct tcgtgcgcga
      601 gacgcccgcc gagccgggga aggcgcgcga cacggacgtg tacgtgatcg acgcacgccc
      661 cggtgcgcgc gccgtgccgc tcaccacctt cgacggaccg gacggcgggc gtcccgcgtg
      721 gtccgccgac ggccgctgga tcgccttcac gcgcggcgac gagccgaggt tctccgcgta
      781 ccacctgaac aagctggccg tggtgccgag cgacggcagc gctccggcgc gcgtcgtcac
      841 gggcgcgctc gaccggccgg tgtcgtcgat ccgcttcgcc gcggatggac gatcggtttt
      901 cgcgacgatc gccgacgatc gcgccgagcc cctggtgcgg atccgcgtcg cggacggcgc
      961 gctggagcgg ctcgtggacg gccggcgcgt cgtgggcagc tacagcgcga tcgccgacgg
     1021 gcgggccgct ttgctcctct caacgcccga ccgtgcaccc gaggtgttcg cgcgcgacgc
     1081 cggcggcgag ctgcgacagc tgtcgcacgc caacgactcg ctgttcgccc aattgcagct
     1141 cggcaccgtg acggacttca cgtcgaggag cgacgacggc accgaggtgc actcgctgct
     1201 gtaccgtccg gctaccgctc cggtgggtcg cctgccgctc gtcgtctacg ttcacggcgg
     1261 cccgaacgga caggacgcct atcgcttcga cttcgatcgg cagctcttcg cggcgaacgg
     1321 ctatgcggtg ctcgccgtga actatcgcgg ctccagtggc cgcggctcgg cgtaccagaa
     1381 ggcgatcttc gccgactggg gcaacaagga agtgaaggac ctcctcggcg ccgtggacga
     1441 ggcggtgcgg caggggctcg ccgatcccga tcggctcggc atcggcggat ggagctacgg
     1501 cggcatcctc accgactaca ccatcgccac gacgccgcga ttcaaggccg ccgtgagcgg
     1561 tgccgggagc gcgctccagc tgtccatgta cggcacggat caatacatcg cgcagtacga
     1621 cctcgagatc ggcacgccgt ggcaggcgca ggaccggtgg atccggatct cgtatccgtt
     1681 cttccacgcg gaccggatca ggacgcccac gctgttcatg ggcggccaga gcgacttcaa
     1741 cgtgccgatc atcggcggcg agcagatgta tcaggcgttg cgcacgctcg gcgtcgagac
     1801 gcagctcgtc atctatccca accagttcca tgggatcacg atgccgagct atcgcgtgga
     1861 tcggctcaag cgctacctgg cgtggtacga tcgattcctc aaggcgccgg tcgcgacggc
     1921 gaacgtcccg tgacggcgtc gcattcgtgt cgtccgtcac atagactgca ccgaatggcc
     1981 gcgccgccga gggccggtat gctcagggag gatgtccgcg acgaggagc
//
LOCUS       DASSYW010000059         3047 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_422240, whole genome shotgun sequence.
ACCESSION   DASSYW010000059 DASSYW010000000
VERSION     DASSYW010000059.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3047)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3047)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3047
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_422240"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1223
                     /locus_tag="VFN38_00975"
     CDS             <1..1223
                     /locus_tag="VFN38_00975"
                     /inference="COORDINATES: protein motif:HMM:NF019352.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HET9010349.1"
                     /translation="RVINASADSHPMHLHGFYYMVDSRGDGGADTTFDTVRRRRANTE
                     DLLPGTTMTLTWVPERAGNWLFHCHLPDHFSARGPMGTLPTPSMVASMRGHGSMNHAL
                     HGMGGLVLGIVVHPGHGSAATPIAKEAPPSRVLRLLIRRNAGDTESRPFYSFALAKDG
                     VEPPPDTGLRVGPPIVVTRGEPVRITVVNTLDVPTAVHWHGIELDSYYDGIAGFSGAG
                     NHIAPVIAAADSFIVRFTPPRAGTFIYHTHVDETRQQLAGLAGPLIVLEPGQVLDSTR
                     DHSFIIGTPLAFADELHSVLINGSAAPAPLTVRAGVPQRLRFINVTLRRPGARIEVWR
                     DTTMLQWRPLAKDGADVPAAWQVARPARTSISIGETLDYEIVLPSGGNTRLEFHGRDG
                     SLLATLPLTVMAGP"
     gene            1370..2902
                     /locus_tag="VFN38_00980"
     CDS             1370..2902
                     /locus_tag="VFN38_00980"
                     /EC_number="3.2.1.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="sialidase family protein"
                     /protein_id="HET9010350.1"
                     /translation="MSPSISLRRETISRFAAALTLFLATAALAACGADRIADVSPPRD
                     AAAQPMAAVGSGPSGVNVVNVSNDTTAQNETPLAVNPLNAANMITGNNDWNWNDGCGV
                     NATFDGGRSWTKTLPNGFLPGVTKYTDDPSVAGTGFYDYGGDPAVAFGPDGTAYFACF
                     GYQAAPPYAVALLVSRSTDGGRTWLAGGASQPLVQAATWQGNGITRGSTGQFPDHESM
                     HVANDGTIYIPWAQFNGSSAHSPIYVTTSRDGGRTFSPALKVTSGSIRNDQDARIVTD
                     PTDGTAYLTFDTGIQGGKGTAMYVAVSHDHGASWSAPALIGTFQNPVCLYPPYCFNIS
                     GNAFRGPGSYPVPAFDPTRHRLYVAYTDIVNGLAQVLLTSASASDPTAWTPAQVVAPG
                     AGDRINVEMSIEPGSGRIDMMTNDRSWSGNTLFDVTYLASGDGGASWSTRRVTQKSWD
                     PSQYGVPSSSSSTGIRPFIGDYDGIVSLPTSAGMTWTGPGRTYGTYPTNLEVYFGSVQ
                     VP"
BASE COUNT          502 a         1063 c          999 g          483 t
ORIGIN      
        1 ggcgtgtcat caacgccagc gccgattcac acccgatgca cctgcacggc ttctactaca
       61 tggtggattc gcggggcgac gggggcgctg acacgacgtt cgataccgtt aggcggcggc
      121 gcgcgaatac cgaggacctg ctcccgggca ccacgatgac gctgacctgg gtgccggagc
      181 gcgctggcaa ctggctcttc cactgtcacc tgcccgatca tttcagcgcg cgcggcccga
      241 tggggacgtt gccgacgccg agcatggtgg cgtcgatgcg cggtcatggc tccatgaacc
      301 atgcgctcca cgggatgggc ggcctcgtac tcggcatcgt cgtgcatccc ggccatggaa
      361 gtgctgcgac gccgatcgcg aaagaggcgc cgccgagccg agtgcttcgc cttctcatca
      421 ggcgcaacgc cggcgacacc gagtcgcgac cattctattc ctttgcgctg gcaaaggatg
      481 gtgtcgagcc gcccccggat accgggctgc gcgtcggtcc accgatcgtc gtcacgcgtg
      541 gcgagcccgt gcgaatcacc gtcgtcaaca cgctcgacgt tccgacggcg gtgcactggc
      601 acggcatcga gttggacagc tactacgacg ggatcgccgg cttcagtggc gcggggaatc
      661 acatcgcgcc ggtcatcgcg gccgcggact cgttcatcgt gcgcttcacg ccgccgcgcg
      721 ccggcacctt catctaccac acgcacgtcg acgagacgcg gcagcaactc gccggcctcg
      781 ccgggccgct catcgtgctc gagcccggac aggtgctcga ctcgacgcgc gaccactcgt
      841 tcatcatcgg tactccgctc gcctttgcgg acgagcttca ctcggtgctg atcaatggca
      901 gcgccgcgcc cgcgccgttg accgtcaggg ctggcgtccc tcagcggctg cgcttcatca
      961 acgtgacgct gaggcggcca ggcgcacgga tagaggtctg gcgcgacacg acgatgctgc
     1021 aatggcggcc gctcgcgaag gacggcgccg acgtgccggc ggcgtggcag gtcgcgcgac
     1081 ccgcgcgcac gagcatctcg atcggcgaga cgctggacta cgagatcgtg ctcccgtcag
     1141 gcggcaacac gcggctcgag ttccatggcc gggatgggtc gctcctcgca acgctcccgc
     1201 tcacggtcat ggcggggccg tgaggctgac tcccgtgcgg gtgagcaaca cgtcttgcga
     1261 ggccgacagg gaagcggtag aacagtggag gcatcggcta tagtggccgc cgatcggctt
     1321 ccaccttccc gccgcacggt cctgccctca cgcacacaac gaggattcga tgtcgccctc
     1381 catctccctc cggcgcgaga ccatttctcg cttcgcagct gcgctgacgt tgttcctggc
     1441 caccgccgcg ctggccgcct gcggcgctga caggatcgcc gatgtgtcgc cgcctcgcga
     1501 tgcggcggcg cagccgatgg cggcggtggg gtcgggaccg agcggggtca acgtcgtcaa
     1561 cgtcagcaat gacacgacgg cgcagaacga gacgccgctc gcggtgaacc cgctgaacgc
     1621 ggcgaacatg atcaccggca acaacgactg gaactggaac gatggctgcg gggtcaacgc
     1681 caccttcgac ggcggacgtt cgtggacgaa gacgctgcct aacggcttcc tccccggggt
     1741 gacgaagtac accgacgacc cctccgtcgc cggcaccggc ttctacgact acggcggcga
     1801 ccccgcggtc gcgttcggcc ccgacggcac cgcgtacttc gcctgcttcg gctaccaggc
     1861 cgctcctcca tacgcggtgg cgctgctggt cagccgctcg accgatggcg gccgcacctg
     1921 gctggccggc ggcgcgagcc agcccctcgt gcaggccgcg acctggcagg ggaatgggat
     1981 caccaggggc tcgaccggtc agttccccga tcacgaatcg atgcacgttg ccaacgacgg
     2041 gacgatctac atcccgtggg cgcagttcaa tggaagcagc gctcattccc cgatctacgt
     2101 caccacctcg cgcgacggcg gccgcacctt ctcgccggcg ctcaaggtca cgtcagggtc
     2161 gatccggaac gaccaggacg cgcgcatcgt gaccgatccc accgacggca ccgcctacct
     2221 gacgttcgac accggcatcc agggcggaaa gggaacggcg atgtacgtgg ccgtgtcgca
     2281 cgatcacggc gcctcgtgga gcgcgccggc gctgatcggg accttccaga atcccgtctg
     2341 cctctatccg ccatactgct tcaacatcag cggcaacgcg tttcgcggac ccggctcgta
     2401 cccggtaccg gcgttcgatc cgacgcggca ccgcctctac gtcgcataca cggacatcgt
     2461 gaacgggctc gcgcaggtgc tgctcacctc tgcgtccgcg agcgatccca ccgcgtggac
     2521 gcccgcgcag gtcgtcgccc ccggtgccgg cgaccggatc aacgtcgaga tgagcatcga
     2581 gccgggatcc ggtcgcatcg acatgatgac caacgatcgc agctggagcg gcaacacgct
     2641 gttcgacgtg acgtaccttg cgagcggcga tgggggcgcg agctggtcga cacggcgtgt
     2701 cacgcagaag agctgggatc cgtcgcagta cggggtgccg agcagctcga gcagcaccgg
     2761 catccgccca ttcatcggcg actacgacgg tatcgtgtcg ctgccgacgt cagcgggaat
     2821 gacgtggacg ggacccgggc gcacgtacgg tacgtaccca acgaatctcg aggtttactt
     2881 cggcagcgtg caggtgccct gaccctcggc gtgctcgccg gccggtaccg ttaggcaccg
     2941 gccggcgggc agggatcctc ttccatgacg ggaggcgaag atcatgcgtt caaccgcgca
     3001 cctgttccag ctcggatgtg caagtgctct tctcatcggc tgcagcg
//
LOCUS       DASSYW010000060         2561 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_127492, whole genome shotgun sequence.
ACCESSION   DASSYW010000060 DASSYW010000000
VERSION     DASSYW010000060.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2561)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2561)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2561
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_127492"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(78..605)
                     /locus_tag="VFN38_00985"
     CDS             complement(78..605)
                     /locus_tag="VFN38_00985"
                     /inference="COORDINATES: protein motif:HMM:NF020397.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1801 domain-containing protein"
                     /protein_id="HET9010351.1"
                     /translation="MARITAPTVERYLDSLPPERREVVAALRDLVRRNLPAGYRETME
                     YGMIEYGIPLERYPGTYNGKPLCYAALSAHKDHCSLHLMTAYQRGERADWLKQAFERA
                     GKKLDMGKACVRFKSLDDLPLPAIGQFIASTSPEQFIAQYEKLRTAPRAAPATRARAA
                     KRGAVAKKAGTRKRT"
     gene            740..1291
                     /locus_tag="VFN38_00990"
     CDS             740..1291
                     /locus_tag="VFN38_00990"
                     /inference="COORDINATES: protein motif:HMM:NF017015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HET9010352.1"
                     /translation="MSTRRLLVSALAVLLAVPSVARSQAPDPSSATGLRKELIAQMDD
                     AGQKLIALAEAIPAEKYSWRPAAGVRSVSEVFMHMVGANYMFPGLAGVKRQPDVTLAR
                     DMETTVTDKTRIIGLLRSSFAFAKQGVMDVPDDGMDTAVNLFGSPSTKRGVLVTSATH
                     AHEHLGQAIAYARMNGIVPPWSR"
     gene            complement(1302..1775)
                     /locus_tag="VFN38_00995"
     CDS             complement(1302..1775)
                     /locus_tag="VFN38_00995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010353.1"
                     /translation="MGLLLRALMPEDADAARAFVSGLFGPSRYRARALEVLASALEFE
                     DPEYMALLAFTEGEERLVGLVLFGTVAGALSVVKVHGVLARERGPAVALLEAVRRTSE
                     HAGERMIVCEVPDDAPFAVAAEALAADGYVEEGRVPDFVRDGVALRLFVRPLLTA"
     gene            complement(1786..>2561)
                     /locus_tag="VFN38_01000"
     CDS             complement(1786..>2561)
                     /locus_tag="VFN38_01000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HET9010354.1"
                     /translation="ILPGMDDDVVKEADKALRKQGLDIRTGTKVTGGGREGDGVFVTV
                     EKDGATERLEGDYVLVSVGRRPATAGIDVQALGLGVGRRGEILVDDQQRTNLKDVYAI
                     GDCTPGPMLAHKAEEEGVVAAEVIAGKAVHTHHRTVPGVVYTWPEIAVVGMTERQAKE
                     SGRDVKIGKFPFSANGRARTAGESTGFVKFVADATTDEILGCHMIGPNVSELIPEVVL
                     AMEYRGSSEDIGITVHAHPTLAETTKEAALAVLGRAIHI"
BASE COUNT          353 a          943 c          884 g          381 t
ORIGIN      
        1 acccgctccg ggaggctgcg gaagaggatc accgtcgcga tgacggggag cagaagggcg
       61 acgagaaacg acatcggcta cgtccgcttc cgggtgccgg ccttcttcgc gaccgcgccg
      121 cgcttcgccg cgcgcgccct cgtcgccggc gcggcgcgcg gcgcggtgcg cagcttctcg
      181 tactgcgcga tgaactgctc gggggacgtg gaggcgatga actggccgat cgccggcaac
      241 gggaggtcgt ccagcgactt gaaccgcacg caggccttgc ccatgtccag cttcttgccc
      301 gcgcgctcga acgcctgctt cagccagtcg gcccgctctc cgcgctggta cgccgtcatc
      361 aggtggagcg agcagtgatc cttgtgcgcc gagagcgccg cgtagcacag cggcttcccg
      421 ttgtaggtgc cgggatagcg ctcgagcgga atgccgtatt cgatcattcc gtactccatc
      481 gtctcgcggt agccggcggg caggttccgg cgcaccaggt cgcggagggc ggcgacgacc
      541 tcacgccgct ccggcggcag cgaatcgagg tacctctcca cggttggcgc ggtgatgcgg
      601 gccatcggcg gacctcctgt gacggatcat ccccgaaagg tgccgctcgc ccccgccgct
      661 cgccagcgta tcccggcccg ctggacggac ccgacggctg ccggtatgct atgagcttcc
      721 ccttctcgcg agctctcgca tgtccactcg ccggctcctc gtatccgccc tcgccgttct
      781 gctcgccgtg ccctcggtcg cccgctccca ggcgcccgat ccgtcgtccg ccaccgggct
      841 ccgcaaggag ctgatcgcgc agatggacga cgccgggcag aagctcatcg cgctcgccga
      901 ggcgattccc gccgagaagt actcctggcg gccggccgcg ggggtgcgct cggtgagcga
      961 ggtgttcatg cacatggtag gcgccaacta catgttcccg gggctcgcgg gggttaagcg
     1021 ccagcccgac gtgaccctcg cgcgggacat ggagacgacc gtcaccgaca agacgcggat
     1081 catcggcctg ctgcggtcgt cgttcgcctt cgcgaagcag ggggtgatgg acgtgcccga
     1141 cgacgggatg gacaccgccg tgaacctgtt cggatcgccc tccacgaagc gcggcgtgct
     1201 cgtcacctcg gcgacgcacg cgcacgagca cctgggccag gccatcgcct acgcgcggat
     1261 gaacgggatc gtgccgccct ggagccgctg aacccggggc gctaggcggt gagcaggggg
     1321 cgcacgaaca gccggagcgc cacgccgtcg cgcacgaagt cggggacgcg cccctcctcc
     1381 acgtagccgt ccgccgcgag cgcctccgcg gcgacggcga acggggcgtc gtcgggcacc
     1441 tcgcacacga tcatgcgctc cccggcgtgc tcgctcgtgc ggcgcaccgc ctccagcagc
     1501 gccaccgccg gcccgcgctc gcgcgccagc acgccgtgca ccttcaccac ggagagcgct
     1561 ccggccacgg tgccgaacag cacgagcccg acgagccgct cctcgccctc cgtgaaggcg
     1621 aggagcgcca tgtactcggg gtcctcgaac tcgagcgcgc tggcgagcac ctccagcgcg
     1681 cgagcccgat accggctggg gccaaacagc ccggagacga aggcgcgcgc cgcgtcggca
     1741 tcctccggca tcagcgcgcg cagcaggagc cccatgagcg gccggtcaga tgtggatcgc
     1801 gcgtcccagc acggcgagcg ccgcttcctt cgtcgtctcg gcgagcgtgg gatgcgcgtg
     1861 caccgtgatc ccgatgtcct cggacgaccc gcgatactcc atcgccagca ccacctcggg
     1921 gatcagctcc gacacgttcg ggccgatcat gtggcagccg aggatctcgt cggtggtggc
     1981 gtcggcgacg aacttcacga agcccgtgga ctcgcccgcg gtgcgcgcgc gcccgttggc
     2041 cgagaagggg aacttgccga tcttcacgtc gcggccgctc tccttcgcct gccgctcggt
     2101 catccccacc accgcgatct ccggccaggt gtagaccacg ccggggacgg tgcggtggtg
     2161 cgtgtgcacc gccttgccgg cgatcacctc ggcggcgacg accccttcct cctcggcctt
     2221 gtgggcgagc atggggcccg gcgtgcagtc gccgatggcg tacacgtcct tcaggttcgt
     2281 gcgctgctgg tcgtccacga ggatctcgcc gcggcgaccg acgccgaggc cgagggcctg
     2341 gacgtcgatg ccggcggtgg cggggcggcg cccgaccgag acgagcacgt agtcgccctc
     2401 gagccgttcc gtcgcgccgt ccttctccac ggtgacgaac acgccgtcgc cctcgcgccc
     2461 gccgccggtg accttcgtgc cggtgcggat gtcgagcccc tgcttgcgga gggccttgtc
     2521 ggcctccttg acgacgtcgt cgtccatgcc ggggaggatg g
//
LOCUS       DASSYW010000061         2657 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1067048, whole genome shotgun sequence.
ACCESSION   DASSYW010000061 DASSYW010000000
VERSION     DASSYW010000061.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2657)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2657)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2657
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1067048"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..619
                     /locus_tag="VFN38_01005"
     CDS             <1..619
                     /locus_tag="VFN38_01005"
                     /inference="COORDINATES: protein motif:HMM:NF014801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FGGY-family carbohydrate kinase"
                     /protein_id="HET9010355.1"
                     /translation="GISLERLRDVLLPGTGAAGFAELERLAAAAPPGSGGVLFTPWLN
                     GERTPVDDRLIRGGLHNLTLATTREHVARAVFEGVALDIRWMQLAVERFCRRRLDPIA
                     FVGGGARSAFWAQTMADVLGRTVQRLEAPASVGLRGAALLAFLGLGELGPDDLHGRAP
                     IAHTHQPSRETEALYDELFAAFRDIYRAGRRVSGRLAAVRDLEEA"
     gene            623..2008
                     /locus_tag="VFN38_01010"
     CDS             623..2008
                     /locus_tag="VFN38_01010"
                     /inference="COORDINATES: protein motif:HMM:NF012503.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HET9010356.1"
                     /translation="MSDPLAEIVAALRPYRDELPTFERLPARGRARSDVLADLEQMAA
                     RERPRWQEGYASGAVYHGDPAHIAFLAQAYALHSQSNPLHVDLWPSTTKLEAEIVAMT
                     ADLLGAGRTGDEICGVVSSGGTESIMLAVKAHRDRAGRDRPQMVLPTTAHAAFDKAAH
                     CFGIEAVKVPVGPDMRADVEATARALTDRTVLVVGSAPSFPHGVIDPIEALSELARER
                     GIAFHTDACLGGFLLPFAERLGHPVPAFDFRLPGVMSMSADTHKYGYAAKGTSVVLYR
                     DAELRHAQYFAYTEWPGGLYMTPTFAGSRPGALSAACWAAMVSIGADGYEDAAHRILR
                     AAATIRDGIAATDGLRVLGDPLFCIAFAAEDDALAIYRVMDAMTARGWSLNGLHQPPA
                     VHICTTLRHTGPGVAERFVHDLRESVAEVRSQPPADHGMAPIYGMAATLPDRGAVEAM
                     MKGFVDLWYQP"
     gene            2098..>2657
                     /locus_tag="VFN38_01015"
     CDS             2098..>2657
                     /locus_tag="VFN38_01015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010357.1"
                     /translation="MLFSSRPRRLALVPALCAGIIAAAATAGALAAADALGDSAVTSR
                     ATVDLTAIGTRIGAHPAYVRVVVDFTDGTLEFGEVEAIDHRAFDGSVRVRLRHHNVQA
                     QAPPVNRAGVQAKVTGARDRLDVVLSFARHRFKYLRVSALHSPERLVLDLYRSRPPVA
                     GAEIPVGRRGCLSLSSVKAAARGFQVR"
BASE COUNT          338 a         1010 c          936 g          373 t
ORIGIN      
        1 cgggatcagc ctcgagcgcc tgcgcgatgt gctcctgccg ggcaccggcg cggcagggtt
       61 cgccgagctc gagcggctcg ccgcagcggc gcccccgggc agcggcggcg tcctgttcac
      121 gccgtggctg aacggcgagc gcacgccggt cgatgaccgg ttgatccgcg gcgggctgca
      181 caacctcacg ctggccacca cgcgcgagca cgtcgcccgc gccgtcttcg aaggcgtggc
      241 gctcgacatc cgctggatgc agctggcggt cgagcgcttc tgccggcggc gcctggatcc
      301 gatcgcgttc gtgggcggcg gcgcgcgctc cgcgttctgg gcgcagacga tggccgatgt
      361 gctcggccgc acggtgcagc ggttggaggc gccggccagc gtgggcctgc gcggcgccgc
      421 gctgctggcc ttcctcgggc ttggcgagct gggccctgac gacctgcacg gacgcgcccc
      481 gatcgcgcac acccatcaac ccagccggga gacggaggcg ctctatgacg agctgttcgc
      541 cgccttccgg gacatctacc gcgccggacg ccgcgtcagc ggccgcctcg ccgccgtgcg
      601 cgatctggag gaggcctaga cgatgagcga ccccctggcg gagatcgtcg cggcgctgcg
      661 cccataccgg gacgagctgc cgacgttcga gcggctcccg gcgcgcggcc gcgcgcgctc
      721 cgacgtgctc gccgacctcg agcagatggc cgcccgtgag cgcccgcgct ggcaggaggg
      781 ctacgcgtca ggcgcggtct accacggcga ccccgcgcac atcgcgttcc tggcgcaggc
      841 gtacgcgctg cattcgcaga gcaacccgct gcacgtcgac ctctggccga gcacgaccaa
      901 gctcgaggcc gagatcgtcg cgatgaccgc ggacctgctc ggcgcgggcc gcaccgggga
      961 cgagatctgc ggcgtcgtct ccagcggcgg caccgagtcg atcatgctcg ccgtcaaggc
     1021 gcaccgcgac cgggccggac gcgaccgccc gcagatggtc ctgccgacca cggcgcacgc
     1081 tgcgttcgac aaggccgcgc actgcttcgg catcgaggcc gtgaaggtgc ccgtcggtcc
     1141 ggacatgcgc gccgacgtcg aggccaccgc ccgcgcgctg accgaccgca cggtgctcgt
     1201 cgtcggctcc gcaccgtcgt tcccgcacgg cgtcatcgac ccgatcgagg ccctctccga
     1261 gctcgcccgc gagcgcggca tcgcttttca cacggacgcg tgcctgggcg ggttcctgct
     1321 cccgttcgcc gagcggctcg gccatccggt gcccgcgttc gacttccggc tgcccggcgt
     1381 gatgtcgatg tcggccgata cgcacaagta cggctacgcc gcgaagggca cctcggtcgt
     1441 gctctaccgc gacgccgaac tgcgccacgc gcagtacttc gcgtacacgg aatggccggg
     1501 cggcctgtac atgacgccga ccttcgccgg cagccggccg ggggcgctga gcgccgcatg
     1561 ctgggcggcg atggtctcga tcggggctga cggctacgag gacgcggcac accggatcct
     1621 gcgggcggcg gcgacgatcc gcgacgggat cgcggcgacg gacgggctgc gcgtgctcgg
     1681 cgacccgctg ttctgcatcg cgttcgccgc cgaggacgac gcgctcgcga tctaccgcgt
     1741 gatggacgcg atgaccgcgc gcggctggag cctcaacgga ctccaccagc cgcccgccgt
     1801 gcacatctgc accacgctcc gtcacaccgg ccccggggtc gcggagcgct tcgtgcacga
     1861 cctccgcgag agcgtcgccg aggtgcgctc gcagccgccc gccgaccacg ggatggcgcc
     1921 gatctacggc atggccgcga cgctccccga ccggggcgcg gtggaggcga tgatgaaggg
     1981 cttcgtcgac ctctggtacc agccgtgagt cagcggaccg tagttcgtcc accgtgactt
     2041 cggtcgactc cggatgcgag gcgcgcggag cgcgcttagc gttgtcgccc tacgcagatg
     2101 ctcttctcgt cccgtcctcg ccgcctcgca ctcgtcccgg cgctctgcgc cgggatcatc
     2161 gccgcggccg cgaccgccgg ggcgttggcc gccgctgacg cgctgggcga cagcgcggtt
     2221 acgtcgcgcg ccacggtcga cctgaccgcg atcggcaccc ggatcggcgc gcaccccgcc
     2281 tacgtccgcg tcgtcgtcga cttcaccgac ggcacgctgg agttcggaga ggtcgaggcc
     2341 atcgaccacc gcgcgttcga tgggtcagtc cgcgtccggc tgcgccacca caacgtccaa
     2401 gcccaggcac cacccgtgaa ccgcgccggc gtccaggcga aggtgaccgg cgcccgcgac
     2461 cgcctcgacg tcgtcctctc cttcgcacgc catcgcttca agtacctgcg ggtcagcgcg
     2521 ctgcactcgc cggagcggct cgtcctggac ctctatcgca gccgcccgcc ggtggcgggc
     2581 gctgagatcc ccgtcggacg ccgcggctgt ctgtcactgt cgagcgtcaa ggccgctgcg
     2641 cgcggcttcc aggtgcg
//
LOCUS       DASSYW010000062         2878 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_587762, whole genome shotgun sequence.
ACCESSION   DASSYW010000062 DASSYW010000000
VERSION     DASSYW010000062.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2878)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2878)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2878
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_587762"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2085
                     /locus_tag="VFN38_01020"
     CDS             <1..2085
                     /locus_tag="VFN38_01020"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF013206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HET9010358.1"
                     /translation="YNGDPDRLGDRELRDRLASVGRLWFVDAPVPPDSGGVAATLAAA
                     DRETRNAEAFAAVWAQTDSLYFARSPARHAQWVALRDRFAPSATAASSDDALADVVHE
                     MMRERPTLRTPATGRAAVSSAHPVATAAGLEILRRGGNVVDAAVAVSFALGVVEPDAS
                     GIGGYGQMIVRLKGMERPTLVEFMARAPEEATLANGALLRRGSYPADGPVLVNVPGTV
                     AGMELAFRRYGSGRVKWAELVAPAIRAAEQGYVVSEGLATTLATEREHFLKYPGSAAL
                     FFPAGRPLRAGDTLRNADLARTLRAIADSGASALYGGDVGRRMVSDLRGRGNAMRATD
                     LARYFAAEREPVSGSYRGHTIYSSAPPASGGPTLVAQLNNLERQAAPRLFTEDAPTLH
                     AMLESWKLVPAARGRIADPGLWPIRLDAFLSKDSAAVRWRCFDPARALTPDDVRGDSL
                     PCAKVPAPVARVSAADDDGGEECGDHGGGSAARFCHRTGTTSFSVADVEGNVVSVTQT
                     LGTWGGNFYVTPGLGFLYNDKLTSYGTDPEEYGARLPNARHGSTLAPTIVFRGEGKSS
                     RPVLAAGAAGNAWITSAVYAVVTGVIDHRLDAQRAIELPRFLVGQQRGDVKREYVVQI
                     EDGFAPAVIRRLEKMGHLFQRISLAGELRMGYASAITLGEREVTAAADPRRAGEAGAV
                     GCTGDDGTGCRR"
     gene            complement(2102..>2878)
                     /locus_tag="VFN38_01025"
     CDS             complement(2102..>2878)
                     /locus_tag="VFN38_01025"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HET9010359.1"
                     /translation="GDERRRGVVASSAGNHGLGLAWAAKQLGIRARIFVPATAPRVKL
                     DGIVALGAEVDATRPDYDAAHHAAMAYAGAHEMVFVNPCAGAALLAGQGTVALEILEE
                     LPRVATIVVPVGGGGLIGGIAALVRAVAPEVRLVGAQSVRTNAMAASLAAGRRVDVAV
                     APTLADGLAGQIDDEGFAIGRASLDEIVTVTEQEISEAIAWLSHEHDMRVEGSGAVGV
                     AALLRQRTSAPGSPVAAVLSGGNIDDLRWRAIVDGPGAPD"
BASE COUNT          366 a         1126 c         1021 g          365 t
ORIGIN      
        1 tacaacggcg atcccgaccg gctgggagat cgcgagctgc gcgaccggct cgcctccgtc
       61 ggccggctgt ggttcgtgga cgctccggtg ccgcccgaca gtggcggcgt cgcggccacg
      121 ctggccgccg cggatcgcga aacgcgcaat gccgaagcct tcgccgccgt ctgggcgcag
      181 accgacagcc tctacttcgc ccgctcgccg gcgcggcatg cgcagtgggt cgcactgcgc
      241 gaccggttcg cgccgagcgc caccgcggcc tccagcgacg acgcgctggc tgacgtggtg
      301 cacgagatga tgcgcgagcg gccgacgctg cgcacgccgg ccacggggcg cgccgcggtc
      361 tccagcgccc atcccgtggc caccgccgcc ggcctcgaga tcctgcgccg cggcggcaac
      421 gtcgtggacg cggccgtcgc cgtatcgttc gccctcggcg tcgtggagcc cgacgcgagc
      481 ggcatcggcg gctacggaca gatgatcgtg cggctgaagg gcatggagcg ccccactctg
      541 gtggagttca tggcgcgcgc ccctgaagag gcgacgctcg ccaacggcgc gctgctgcga
      601 cgcggcagct accccgcgga cgggccggtg ctggtgaacg tgcccggcac ggtggcgggc
      661 atggagctcg ccttccggcg ctacggcagc ggcagggtga agtgggcgga gctggtggcg
      721 ccggccattc gggcggcgga gcagggctac gtggtgagcg aggggctggc gacgacgctc
      781 gccaccgagc gcgagcactt cctcaagtat cccggaagcg cggcgctctt cttcccggcc
      841 ggccggccgc tccgcgccgg ggacaccctg cgcaatgccg acctggcgcg cacgctgcgc
      901 gccatcgccg acagcggggc gtccgcgctc tacggcggcg acgtgggccg ccgcatggtg
      961 agcgaccttc gcggccgcgg caatgcgatg cgcgccaccg acctcgcgcg ctacttcgcc
     1021 gccgagcgcg agccggtgtc ggggagctac cgcggccaca ccatctactc cagcgcgccc
     1081 ccggcgtcgg gtggaccgac gctcgtcgcg cagctcaaca acctggagcg gcaggccgcg
     1141 ccgcgtctct tcaccgagga cgccccaacg ctccacgcca tgctggagtc gtggaagctc
     1201 gtccccgccg cgcgcggacg catcgccgat cccggcctgt ggcccatccg gctcgacgcc
     1261 ttcctgagca aggactccgc ggcggtgcgc tggcgctgct tcgaccccgc gcgggcgctc
     1321 acgcccgacg acgtccgcgg cgacagcctg ccctgcgcga aggtgcccgc gccggtggct
     1381 cgcgtgtccg cggcggacga cgacggcgga gaggaatgcg gcgaccacgg cgggggctcc
     1441 gcggcacgct tctgccaccg caccgggacg acgtcgttct ccgtggccga cgtggagggg
     1501 aacgtcgtct ccgtcacgca gaccctcggc acctggggcg gcaacttcta cgtcacgccc
     1561 ggcctcggtt tcctgtacaa cgacaagctc acctcgtacg gcaccgaccc ggaggagtac
     1621 ggcgcgcggc tgcccaacgc gcggcatggc agcacgctcg cgcccaccat cgtgttccgg
     1681 ggagagggga agtcgtcgcg tcccgtgctc gccgccggcg cggcggggaa cgcgtggatc
     1741 acctcggccg tgtacgccgt cgtcaccggc gtgatcgacc accggctcga cgcgcaacgc
     1801 gccatcgagc tgccgcgctt tctcgtgggc cagcagcgcg gcgacgtgaa gcgcgaatac
     1861 gtcgtgcaga tcgaggacgg cttcgcccca gccgtcatcc ggcggctcga gaagatgggg
     1921 cacctcttcc agcgcatctc gctcgcgggc gagctgcgga tgggctacgc ctccgccatc
     1981 acgctcggcg agcgcgaggt caccgcggcc gccgatccgc ggcgcgccgg cgaggcgggc
     2041 gccgtcggct gcaccggcga cgacggcacg ggctgccgcc gctgagcggt ggcgcgtgcc
     2101 ctcagtcggg cgcgcccggc ccgtcgacga tcgcgcgcca ccgcaggtcg tcgatgttcc
     2161 cgccgctcag caccgcggcc accggcgacc cgggcgccga cgtgcgctgt cgcagcaggg
     2221 ccgccacccc gaccgcgccc gagccctcca cccgcatgtc gtgctcgtgc gacagccagg
     2281 cgatcgcctc gctgatctcc tgctcggtca ccgtcacgat ctcgtccagc gacgcgcggc
     2341 cgatcgcgaa tccctcgtcg tcgatctggc cggcgaggcc gtcggcgagc gtcggcgcca
     2401 cggcgacgtc cacgcggcgc cccgcagcga gcgacgccgc catggcgttc gtcctcacgc
     2461 tctgcgctcc gacgagccgt acttcgggtg ccacggcgcg caccagcgcg gcgatgcccc
     2521 cgatcagccc cccgccgccc accggcacca cgatcgtcgc gacgcgcggc agctcctcca
     2581 ggatctcgag cgccaccgtc ccctggcccg ccagcagcgc cgcgcccgcg cacgggttga
     2641 cgaacaccat ctcgtgcgcg cctgcgtacg ccatggccgc gtgatgcgcc gcatcgtagt
     2701 cgggccgggt cgcgtccacc tcggccccca gcgccacgat cccgtcgagc ttcacccttg
     2761 gcgccgtggc ggggacgaag atgcgggcgc ggatgcccag ttgcttcgcc gcccaggcga
     2821 ggccgagccc gtggttgccg gccgacgatg ccaccacccc acgccgccgc tcgtcgcc
//
LOCUS       DASSYW010000063         4588 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_513920, whole genome shotgun sequence.
ACCESSION   DASSYW010000063 DASSYW010000000
VERSION     DASSYW010000063.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4588)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4588)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4588
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_513920"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..784
                     /locus_tag="VFN38_01030"
     CDS             <1..784
                     /locus_tag="VFN38_01030"
                     /inference="COORDINATES: protein motif:HMM:NF013739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HET9010360.1"
                     /translation="GTQAAPMFHPVGGMDQIPPAFQRAIGSGRITLGADVQSVHQDDR
                     GVKVTYVNRGRLARTEVTADYVVVCMPFSVLAGVDINLSPDMMAAVRATTYSTSAKLG
                     LAMKRRFWEEDDQIFGGHLYSNLPLGEFSYPSSDYLSKKGVLLGLYAHAPIGDLADRP
                     VSARVEHVLTHASKVHPQIRREFESGYAVWWKKVPYSLGGFAAGAPPARLAQFAKVDN
                     RIILGSAATAPYSEPDWQEGAVAAAWQALKSLHGRAMQASQA"
     gene            complement(785..1702)
                     /locus_tag="VFN38_01035"
     CDS             complement(785..1702)
                     /locus_tag="VFN38_01035"
                     /inference="COORDINATES: protein motif:HMM:TIGR02757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02757 family protein"
                     /protein_id="HET9010361.1"
                     /translation="MPAVPRRRADHRVLTERLDTVYRTFDHVDSALDPVHIVRRYVSR
                     EDREIVGFCASALAFGRVASVLQSVEALLRVMGPKPAAFVRRFDPAVHGPALAPLVHR
                     WIRGRDLVALLIVLQRMLREHGSIEGFFLAGDDPASPDVRVALDSFSTRALATDLTGA
                     YGKRRPARAGVAYFFPRPSAGSACKRLNLFLRWMVRKDAIDLAVWTTLSPSRLVVPLD
                     THVIRLGRCLQLTRYTSPGWKMAAEITASLREMDAADPVRFDFSLCHVGMMNACGFGK
                     SQRDSQCPLRGACRPVLRMGRRGRSKETL"
     gene            complement(1660..2280)
                     /locus_tag="VFN38_01040"
     CDS             complement(1660..2280)
                     /locus_tag="VFN38_01040"
                     /inference="COORDINATES: protein motif:HMM:NF012383.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyltransferase family protein"
                     /protein_id="HET9010362.1"
                     /translation="MSKRDEIREKAIGELQKHHVLMLDGHFDFGNGYHGRVYLNPHQL
                     FCQPSIIWRFAQDLLDLLPAELLAQTDVVAGPATGGALLAHTVAGLLDSRRALSRPPT
                     MFAPFRPEGGGGHSLTPFYAKQIKGRRVLLVDDVRNTGQTLARCADVVRAAGGSVVAT
                     AQIYDRMEAVADAGVPNVALAEYKAPENHEASSCPLCRDGVPITAF"
     gene            complement(2295..3608)
                     /locus_tag="VFN38_01045"
     CDS             complement(2295..3608)
                     /locus_tag="VFN38_01045"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004151 - dihydroorotase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HET9010363.1"
                     /translation="MKKLLKGGRVVDPANGRDGAFDILIDGDRIAKVGKDLPVDGATV
                     VEIPAGLVVVPGLIDMHVHLREPGQEHKETVATGCASAVAGGFTAVACMPNTSPVNDS
                     ATVTSLILAKAAAANLARVYPIGAVSKGQKGELLADIGELKAAGCVAITDDGHPTATA
                     LLLRRALEYAGMFGIPVVEHCEDPTLKGDGVAHEGYHASRLGLRGIPGACESLGVERG
                     VLLAELTGSHFHVAHMSARGSMRAVRKAKEAGVRVTCEVAPHHFTLTDEALGSPVPYD
                     TNTKMNPPLREAADRDAMIAGIADGTVDVIATDHAPHHYDEKKVEFDRAPFGIVGLET
                     AVPLTFDQLVHAGHIPLRRMIELLSVNPARVLNLPGGTLSEGAAADITVLAPDLAVRI
                     EAAKLRSRSKNTPFDGWNLRGGVAATIVGGRVVFTNQDVFVAAGL"
     gene            complement(3592..4527)
                     /locus_tag="VFN38_01050"
     CDS             complement(3592..4527)
                     /locus_tag="VFN38_01050"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004070 - aspartate carbamoyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0016597 - amino acid binding [Evidence
                     IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase catalytic
                     subunit"
                     /protein_id="HET9010364.1"
                     /translation="MLKSRHLLGIDDLSADEIYRVLDTAEAMREIGERPIKKVPTLRG
                     KTLVNLFFEPSTRTRTSFEIAEKRLSADTLSVAIGTSSVVKGETLVDTALNLEAMSPD
                     MIVLRHSSSGACHLLSRVCRSAIVNAGDGTNEHPTQALLDALTIRERKGRLKGLKVAI
                     VGDLLHSRVLRSNIHLLTKMGADVWICGPPTLVPAEIRRLGVRVTHHVDEAVADADVV
                     MLLRIQLERMEGAYFPSLREYFQVFGMTETRLRLAKPDVMIMHPGPMNRGVEIASEVA
                     DGPYSVILDQVANGVAVRMAVLYLLAGGAEHEEAA"
BASE COUNT          705 a         1606 c         1576 g          701 t
ORIGIN      
        1 cggcacgcag gcggcgccga tgtttcatcc ggtcggcggg atggatcaga tcccgcctgc
       61 cttccagcgc gcgatcggaa gcgggcggat cacgctgggc gccgacgtcc agtccgtgca
      121 tcaggacgac cgcggcgtga aggtgacgta tgtcaaccgg ggacgcctgg cccggaccga
      181 ggtcaccgcg gactacgtcg tcgtctgcat gccgttctcg gtcctcgccg gcgtggacat
      241 caacctgtcg cccgacatga tggcggcggt gcgagccacc acctacagca ccagcgccaa
      301 gctggggctg gcgatgaagc ggcgcttctg ggaagaggac gaccagatct tcggcggcca
      361 cctctactcg aacctgccgc tcggcgagtt ctcgtatccg tcgagcgact atttgtcgaa
      421 gaagggcgtg ctgctcggtc tctacgcgca cgcaccgatc ggcgacctgg ccgatcgccc
      481 cgtgagcgcg cgcgtcgagc acgtgctcac gcacgcgagc aaagtgcatc cgcagatccg
      541 tcgtgagttc gagagcggct atgcggtgtg gtggaagaag gtgccgtaca gcctgggcgg
      601 cttcgccgcg ggcgcgccgc cggcgcggct ggcgcagttc gcaaaagtcg acaaccggat
      661 cattctcggc tcggcggcga cggcgccgta ctccgaaccc gactggcagg aaggcgcggt
      721 ggcggctgcg tggcaggcgc tgaaatcgct gcacggccgc gcgatgcagg cgtcgcaggc
      781 ctgactataa ggtctcttta cttcggcctc tccgccccat ccggagcacc gggcggcacg
      841 cgccgcggag cggacactgc gaatcgcgct gcgacttgcc gaatccgcag gcgttcatca
      901 tgccgacgtg gcagagcgaa aagtcgaagc ggaccggatc ggcggcgtcc atctcgcgca
      961 gcgacgcggt aatctccgcc gccatcttcc agcccgggct cgtgtagcgc gtcagctgca
     1021 ggcaccggcc caggcggatg acgtgcgtgt cgagcggcac gaccagcctc gacggcgaca
     1081 gcgtcgtcca caccgccagg tcgatcgcat ccttgcgcac catccagcgc aggaacaggt
     1141 tcagccgctt gcaggcgctg cccgccgacg ggcgcggaaa gaaatacgcc accccggcgc
     1201 gggcgggacg ccgcttcccg taggcaccgg tcagatccgt ggcgagcgca cgtgtggaga
     1261 acgagtcgag cgcgacgcga acatcgggcg acgcgggatc gtcgccggcc aggaagaacc
     1321 cctcgatcga gccgtgctcg cgcagcatgc gctgcaggac gatcagcagc gccacgagat
     1381 cgcggccgcg aatccagcgg tggacgaggg gcgccaatgc gggtccgtgc acggcggggt
     1441 cgaagcggcg gacgaacgcc gccggcttcg ggcccatcac gcggagcagc gcctccaccg
     1501 actgcagcac gctggccacg cggccgaagg ccagcgccga cgcgcagaaa cccacgatct
     1561 cgcggtcctc gcgcgagacg tagcgccgca cgatgtggac gggatcgagc gccgaatcga
     1621 cgtgatcgaa ggtccggtag acggtgtcga gccgctccgt cagaacgcgg tgatcggcac
     1681 gccgtcgcgg cacagcgggc atgagcttgc ctcgtggttc tccggcgcct tgtattcggc
     1741 cagcgcgacg ttcggcacgc ctgcgtcggc cacggcctcc atccgatcgt agatctgcgc
     1801 cgtggccacc acggacccgc cggccgcgcg caccacgtcg gcgcaccgcg ccagcgtctg
     1861 gccggtgttg cgcacgtcgt ccacgagcag cacgcggcgc cccttgatct gcttcgcgta
     1921 gaacggcgtg agcgagtgcc cgccgccgcc ttccgggcgg aagggcgcga acatcgtggg
     1981 cggacgcgag agcgcgcgcc ggctgtcgag cagcccggcg acggtgtgcg ccagcagcgc
     2041 gccgccggtg gcgggccctg ccacgacgtc ggtctgggcg agcagctccg ccggcagcag
     2101 gtcgagcagg tcctgcgcga agcgccagat gatcgatggt tggcagaaga gctgatgcgg
     2161 gttgaggtac acccgcccgt gatagccgtt gccgaagtcg aagtgcccgt cgagcatcag
     2221 cacgtgatgc ttctgcagct cgccgatcgc cttctctcga atctcgtctc gtttgctcat
     2281 gcgttggggc cggtctaaag accggcggct acgaaaacat cctggttcgt gaacaccaca
     2341 cggccgccga cgatggtggc cgccacgccg ccgcgcagat tccagccgtc gaacggcgtg
     2401 ttcttcgagc gcgaccgcag cttcgccgcc tcgatgcgga ccgcgaggtc cggcgcgagc
     2461 acggtaatgt cggccgccgc gccttccgac agcgttccgc ccggcaggtt cagcacgcgc
     2521 gcgggattga ccgacagcag ctcgatcatg cggcgcagcg gaatgtgccc ggcgtgcacc
     2581 agctggtcga acgtcagcgg caccgcggtc tcgagcccga cgatgccgaa cggtgcgcgg
     2641 tcgaactcca ccttcttctc gtcgtagtga tgcggcgcgt ggtcggtggc aatcacgtcc
     2701 accgtgccgt cggctatgcc ggcgatcatg gcgtcccgat cggccgcttc gcgcagcggc
     2761 gggttcatct tcgtgttggt gtcgtacggc acgggcgacc cgagcgcctc gtcggtgagc
     2821 gtgaagtgat gcggcgccac ctcgcaggtg acgcgcacgc ccgcctcttt ggccttgcgc
     2881 accgcgcgca tggagccgcg agcgctcatg tgcgccacgt ggaagtgcga gccggtcagt
     2941 tccgccagca ggacaccgcg ctccacgccc agcgactcgc aggcgcccgg gatgccgcgc
     3001 aggcccaggc gcgacgcgtg gtagccctcg tgcgccacgc cgtcgccctt cagcgtcggg
     3061 tcctcgcagt gctccaccac cgggatgccg aacatgccgg cgtattcgag cgcccgccgc
     3121 agcagcagcg cggtggcggt gggatggccg tcgtcggtaa tcgccacgca cccggccgcc
     3181 ttcagctcgc cgatgtccgc cagcagctcg cccttctgcc ctttcgacac ggcgccaatc
     3241 gggtacacgc gcgccaggtt ggcggcggcc gccttggcga ggatgagcga cgtcacggtg
     3301 gcgctgtcgt tcaccgggct cgtgttcggc atgcacgcga cggcggtgaa cccgccggcg
     3361 accgccgacg cgcagccggt ggccacggtc tccttgtgct cctgccccgg ctcgcgcagg
     3421 tgcacgtgca tgtcgatgag gcccggcacg accacgagac ccgccggaat ctccaccacg
     3481 gtggcgccgt ccaccggcag gtccttgccg accttcgcga tgcggtcgcc gtcgatcagg
     3541 atgtcgaagg cgccgtcgcg cccgttggcg gggtcgacga cgcgcccgcc cttaagcagc
     3601 ttcttcatgt tcggctccgc cggcgagcag gtacagcacc gccatccgga ccgccacgcc
     3661 gttggccacc tggtcgagga tcaccgagta ggggccgtcg gccacctccg acgcaatctc
     3721 gacgccccgg ttcatcggac cgggatgcat gatcatcacg tccggtttcg cgaggcgcag
     3781 ccgcgtctcg gtcatcccga acacctgaaa gtactcgcgc agcgagggga agtaggcgcc
     3841 ctccatgcgt tcgagctgaa tccgcagcag catcaccacg tcggcgtcgg ccacggcctc
     3901 gtcgacgtgg tgggtgaccc gcacgccgag gcgccggatt tcagccggga ccagcgtggg
     3961 cggcccgcat atccacacgt cggcacccat cttcgtgagc aggtggatgt tcgagcgcag
     4021 cacccggctg tggagcaggt cgccgacgat ggccaccttc agccctttca gccgcccctt
     4081 gcgttcgcgg atcgtgagcg cgtcgagcag cgcctgggtc gggtgctcgt tggtgccgtc
     4141 gccggcgttg acgatggcgg aacggcagac cctcgacagc agatggcagg cacccgacga
     4201 cgagtggcgc agcacgatca tgtcgggcga catcgcctcg aggttgaggg cggtgtcgac
     4261 cagcgtctcc cccttcacca cgctggaggt gccgatcgcc acgctgagcg tgtcggcgct
     4321 caggcgcttc tcggcgatct cgaacgacgt gcgcgtgcgc gtgctcggct cgaagaacag
     4381 gttcaccagc gtcttgccgc gcagcgtcgg caccttcttg atcgggcgct cgccgatctc
     4441 gcgcatcgct tcggccgtgt cgaggacccg gtagatctcg tctgcggaca gatcgtcgat
     4501 gccgagcaga tggcgcgact tcagcacgat cgcgcctccg cctgcggctc ttcgagcagc
     4561 acttcgtcct cgccgtcgat ctcctgca
//
LOCUS       DASSYW010000064         2041 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_753956, whole genome shotgun sequence.
ACCESSION   DASSYW010000064 DASSYW010000000
VERSION     DASSYW010000064.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2041)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2041)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2041
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_753956"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2041
                     /locus_tag="VFN38_01055"
     CDS             <1..>2041
                     /locus_tag="VFN38_01055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010365.1"
                     /translation="ETGLSLGTPHYMSPEQATGDRNVDARSDLYSLASVLFEMLVGEP
                     PITGKTVQAVIAKLLTEPAMHVRTVRPTVSEPVDAAIAKALSKVPADRFASVAEFSRA
                     LEAAPTAAPNVAGTTGASAQTSRPRSRTAMLVGAVAAVAVVAGGAALVAKGAFREKDT
                     SAALRDRTQLTFSGKIAAPTVSQDGKQLAFFTKDCAGADCRYAIDLQDVGSTTTRRVL
                     EGATSAYALEWSPDRRNLMMNGTIAGRFGTYLVSALGGTPRYLTSGAATFYAGGDSLL
                     IGSLVPTNGAFTVKVAGLDGTVRDSIRVPGPGTQIGALASVPGTSRIVAMVIQPPHGL
                     WQVFERNGKLTDRLLNSCTCGGVASRDALWMTRAGPTAAEAVVRVALASVTGKLATHQ
                     DTIYSGRFTNLSVTADGAQMTVDDGSYSFSVIAANVTDLIKGTLPNAPPLMQASNRVL
                     ALVSPDGGRLLMRRSVPTPTGGDEVRVSVAPFGGGAETAVSTTGRVVSARWIDSVTVG
                     IYSLTGAGPQLARIDIRNGASTLALQVRDSAIAGAVALPNGWAWIPGTRDRVIIEENG
                     NRREIPKSEYYAALTDVDVSPDHTRLLTVGWNAATSDTLRVDVIPLAGGAPVEWSRHF
                     AEDGLASWLADGSIAFTVWSSTDAATMYQLAGPAQEKPIGPLAHVSNIVSVSDDL"
BASE COUNT          319 a          704 c          715 g          303 t
ORIGIN      
        1 ccgagaccgg cctgtcgttg ggtacgccgc actacatgag ccccgagcag gcaaccggcg
       61 accgcaatgt ggacgcgcgc agcgacctgt actcgctggc ctcggtgctg ttcgagatgc
      121 tcgtcggtga gccaccgatc acgggcaaga ccgtccaggc ggtcattgcg aagttgctca
      181 cggagccagc gatgcacgtg agaaccgtgc gccccacggt gtccgagccc gtggacgcag
      241 cgatcgcgaa ggccctgtcg aaggtgcccg ccgaccggtt cgcgagcgtc gccgagttca
      301 gccgcgcact ggaggcggca ccaaccgcgg cgcctaacgt cgccggcacg accggcgcgt
      361 cggcgcagac gtcgcgcccg cgctcgcgaa cggccatgct cgtcggcgcc gtcgccgccg
      421 ttgcggtagt cgccggcggt gccgcgctcg tcgcgaaagg cgcgttcagg gaaaaggaca
      481 cgtctgctgc cctccgcgac cgaacgcagt tgaccttctc cggcaagatc gccgcgccga
      541 cggtttcgca ggacggcaaa cagctcgcgt tcttcacgaa agactgcgcg ggcgccgatt
      601 gccgctacgc gatcgacctc caggacgtcg gcagcacgac cacgcgccgc gtgctcgagg
      661 gcgcgacgtc ggcgtacgcg ctcgagtgga gcccggaccg tcgcaacctc atgatgaacg
      721 gcacgatcgc cggccggttc ggcacctacc tcgtttcggc gttaggcggc acaccgcgct
      781 atctcacgtc cggcgcggca acgttctacg ccggcggaga ctcgctattg atcggatcgc
      841 tcgtgcccac caacggcgcg ttcaccgtaa aggtcgcggg actcgatgga acggtgcggg
      901 acagcatccg cgtgcccggt ccgggcacgc agatcggggc gctcgcgtcg gtgcccggca
      961 cgtcgcgcat cgtcgccatg gtgatccagc cgccgcacgg gctctggcag gtgttcgagc
     1021 ggaacggcaa gctcacggac aggctgctca actcgtgcac ctgcgggggc gtcgcgtcgc
     1081 gcgacgccct ctggatgacg cgcgccggac cgacggccgc cgaagctgtc gttcgagtcg
     1141 cgttggcctc ggtcaccggc aagctcgcga ctcatcagga cacgatctac agcgggcggt
     1201 tcacgaacct ctcggtgacc gccgacggcg cgcagatgac ggtcgacgat ggcagctact
     1261 cgttctcggt catcgccgcg aacgttaccg acctgatcaa ggggacactg cctaacgcgc
     1321 caccgctcat gcaggcgtcg aaccgcgtcc tcgcgctggt ctcgccggac ggtgggcggc
     1381 tgctcatgcg gcgcagcgtc ccgacgccga cgggaggcga cgaagttcgc gtctcggtgg
     1441 cgccgttcgg aggcggcgcc gagacagcgg tgagcacgac tggccgcgtg gtatccgccc
     1501 gatggatcga ttccgtcacc gtgggcatct actcgctcac cggggccggg ccgcagctcg
     1561 cccggatcga catccggaac ggcgcctcca ctctggcgct tcaggtgcgc gactcggcca
     1621 tcgcgggcgc ggtcgctctg cctaacggct gggcgtggat ccccggcacg cgggatcggg
     1681 tgatcatcga ggagaacggg aaccggcgtg agatcccgaa gtcggagtac tacgcagcgc
     1741 tgacggacgt cgacgtctcc cccgatcata cgcggctcct cacggtcggg tggaacgcgg
     1801 cgacgagcga cacgctgcgg gtcgatgtga tcccactggc cggcggtgcg ccggtcgagt
     1861 ggtcgcggca cttcgcggaa gacgggctcg cgtcgtggct cgccgacggc tcgatcgcgt
     1921 tcacggtgtg gagcagcacg gacgcggcga cgatgtacca gctggcgggt ccggcgcagg
     1981 agaagccgat cgggccgctc gcgcacgtct cgaacatcgt gagcgtgtcc gacgatctca
     2041 g
//
LOCUS       DASSYW010000065         2116 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_145691, whole genome shotgun sequence.
ACCESSION   DASSYW010000065 DASSYW010000000
VERSION     DASSYW010000065.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2116)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2116)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2116
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_145691"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            262..2082
                     /locus_tag="VFN38_01060"
     CDS             262..2082
                     /locus_tag="VFN38_01060"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HET9010366.1"
                     /translation="MRRPLLAILLLALAAALGAAPAGAAAPAKAPYIAVYKSSVASPG
                     AATTRREARDGFRARFRYAHAIKGFAASLTSAQAAKLRDDPAIAFLSADRTVHAVGTT
                     APLAAGDSAPTGVRRMGAATSTTAAQAATSAVAVIDTGIALSHPDRNAAAGKNCVNTS
                     NAPADDNGHGTHVSGTIAARNNGSGLVGVAPGTLVYAVKVLNAQGSGTWSQVICGIDW
                     VTANAASKNIRVANMSLGGSGSTDNNCGNSNADALHKAICNSTAANVAYAIAAGNSGT
                     NFSTSTPAAYPEALTVTAMSDSDGAAGATGGAPTCRTGELDDRYASFSNYAVASTEAS
                     HAIAGAGVCIRSTWLSGGYNTISGTSMASPHVAGTIALCVGNGGVAGPCNGLTPAQIV
                     QKLRTDAAGAATLSNGFTGDPLHPVSTRHYGYLAAPGLYLSAAPSGPAAPVASFTVSC
                     PSLTCNFDASASNDPDGGSITDYAWSFGDGTSANGASPTISHTYGSAGPKTVTLTVTD
                     NDSPAGTASQSNTATPSNPPPIALTARGYKVRGVQKVDLSWTGASGAVDVFRNSVNVF
                     TVSSGSSWTDSLGKGGGTYNYRVCETATPANCSNTATVVF"
BASE COUNT          329 a          837 c          711 g          239 t
ORIGIN      
        1 ggacggcgac ttcacggtct tctacctcga cggcggccgg ctggtgtccg ccgccaccgt
       61 gggccgcccg cgggagctcg cgcaggcgcg ccggatgatc gccgagcgcg ccaccccgag
      121 ccgcgaggtg ctggcggatc ccggcgccga tctcgccgcg ctctagcggc ggcggccccg
      181 gagggggaca gcattgctcc gaaaagggcc tggacaggcg catgggggcg cgattacggt
      241 gggcgcggga gggttccccg cttgagacga ccgctgctcg ccatcctgct cctcgcgcta
      301 gccgccgctc tcggcgcggc gcccgccggc gcggccgcgc ccgccaaggc gccctacata
      361 gccgtctaca agtcgtcggt ggccagcccc ggcgccgcca ccacccggcg cgaggcgcgc
      421 gacgggttcc gcgcgcgctt ccgctacgcc cacgccatca agggcttcgc cgccagcctc
      481 acgagcgccc aggccgcgaa gctgcgcgac gatcccgcca tcgcgttcct gtcggccgac
      541 cgcaccgtgc acgcggtggg gacgacggcg ccgctcgccg caggcgactc cgcgcccacg
      601 ggcgtgcgcc ggatgggcgc cgccaccagc accacggcgg cccaggccgc cacctccgcg
      661 gtggccgtga tcgacaccgg catcgccctc tcgcacccgg accggaacgc ggccgcgggc
      721 aagaactgcg tgaacacgtc gaacgcgccg gcggacgaca acggacacgg aacgcacgtg
      781 tccggcacga tcgccgcccg caacaacggc tccggcctgg tgggcgtggc gcccggcacg
      841 ctggtctacg cggtgaaggt gctcaacgcc cagggcagcg gcacatggtc acaggtcatc
      901 tgcggcatcg actgggtcac ggccaacgcc gcctcgaaga acatccgcgt ggccaacatg
      961 agcctcggcg gctccggctc gaccgacaac aactgcggca actccaacgc cgacgccctc
     1021 cacaaggcca tctgcaactc caccgccgcg aacgtggcgt acgcgatcgc ggccggcaac
     1081 agcggcacga acttctccac ctcgacgccc gccgcctacc ccgaggcgct cacggtcacc
     1141 gcgatgtccg acagcgacgg ggcggccggg gccacgggcg gcgcgcccac ctgccgcacg
     1201 ggcgagctcg acgaccgcta cgcgagcttc tccaactacg cggtggcgag caccgaggcg
     1261 agccacgcga tcgccggcgc gggcgtctgc atccggtcca cctggctcag cggcggctac
     1321 aacacgatct cgggcacgag catggcctcg ccgcacgtgg ccggcacgat cgcgctgtgc
     1381 gtcggcaacg gcggggtggc gggcccgtgc aacggcctca ccccggcgca gatcgtgcag
     1441 aagctgcgca ccgacgccgc cggcgcggcc acgctgtcga acggcttcac cggcgacccg
     1501 ctccacccgg tcagcacccg ccactacggc tacctcgccg cgcccggcct ctatctctcg
     1561 gccgcgccga gcggcccggc cgcgccggtg gcgagcttca cggtctcgtg ccccagcctc
     1621 acgtgcaact tcgacgcgtc cgcctccaac gacccggacg gcggctcgat caccgactac
     1681 gcctggtcct tcggcgacgg cacgtcggca aacggggcga gcccgaccat ctcgcacacc
     1741 tacgggtccg ccggcccgaa gacggtaacc ctcaccgtca ccgacaacga cagtcccgcc
     1801 ggtaccgcga gccagtccaa cacggccacg ccgtccaacc cgccgccgat cgcgctcacc
     1861 gcgcgcggct acaaggtgag gggcgtccag aaggtcgatc tgagctggac cggcgcgagc
     1921 ggggccgtgg acgtgttccg caacagcgtg aacgtcttca cggtgagcag cggctcgtcc
     1981 tggaccgact cgctcggcaa gggcggcggc acctacaact acagggtgtg cgagaccgcg
     2041 acgccggcga actgctcgaa caccgccacg gtcgtcttct agcggccgga gagaagctcc
     2101 gggacaggga ctcgaa
//
LOCUS       DASSYW010000066         4412 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_587711, whole genome shotgun sequence.
ACCESSION   DASSYW010000066 DASSYW010000000
VERSION     DASSYW010000066.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4412)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4412)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4412
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_587711"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..791
                     /gene="guaA"
                     /locus_tag="VFN38_01065"
     CDS             <1..791
                     /gene="guaA"
                     /locus_tag="VFN38_01065"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003922 - GMP synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HET9010367.1"
                     /translation="LRLHERDQVERTMRTHMGIKLVTVDASRRFLDALKDVEDPEAKR
                     RAIGHTFIDVFEEATATAGTHAKFLVQGTLYPDVIESSSPTGGPSVTIKTHHNVGGLK
                     PGMQFSLIEPLRELFKDEVRNVGRELGLSEEMVGRHPFPGPGLAIRVLGEVNEPSLKV
                     LRQADAIYLEEIRSANLYNEIWQAFAVLLPVRSVGVMGDERTYDNVVALRAVTSTDGM
                     TADWFPFPHDVMARISNRIIREVDGVNRVVYDVSSKPPATIEWE"
     gene            complement(844..1344)
                     /locus_tag="VFN38_01070"
     CDS             complement(844..1344)
                     /locus_tag="VFN38_01070"
                     /inference="COORDINATES: protein motif:HMM:NF012579.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1902495 - transmembrane transporter
                     complex [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HET9010368.1"
                     /translation="MRRRQRPSTVQHRIHRDGTARVLQRRRNQARARGRVEDDILKEL
                     IALLKLDEKSEGMLYKMLKRRENLGSTGIGRGIAIPHCRSLVVNKLRVAFGRKPRGVD
                     FKAIDEKPVNFFFLIVAPPLEVSNQYLPVLGKIAQFSKEPDVPQRLLGLTEPKQFLEL
                     LKEKGV"
     gene            1438..2478
                     /gene="dusB"
                     /locus_tag="VFN38_01075"
     CDS             1438..2478
                     /gene="dusB"
                     /locus_tag="VFN38_01075"
                     /EC_number="1.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0017150 - tRNA dihydrouridine synthase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase DusB"
                     /protein_id="HET9010369.1"
                     /translation="MRFPFPLDAEVPLYLAPMAGVSESPFRQLCHEHGADVVVTEFLS
                     AEGIRRENEATIHKLSFGPGERPIGVQIFGADPVAMGEAARFVSDIFQPEFIDINFGC
                     PVKKVVRRNGGSGCLRDLDLVQQVIRAVSAATHLPVTCKIRSGWNEEMRDPVRIALKC
                     QDAGARVIALHPRTRTQMYSGSARWEEIAAVVEAVDIPVLGNGDIKTAEDAVRMRTQT
                     KCAGIMIARGSYGQPWIFDQVKDLLAGRPKRPAPAVAERFAIALDHARKVMAYETDPR
                     GAAIEFRKHLGWYAKGLHGGAELRKKLYAVTSFAEVEGIFADYLANAERYAASAEIAA
                     DAGDDGLEADAA"
     gene            2475..3224
                     /gene="larB"
                     /locus_tag="VFN38_01080"
     CDS             2475..3224
                     /gene="larB"
                     /locus_tag="VFN38_01080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018281842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nickel pincer cofactor biosynthesis protein
                     LarB"
                     /protein_id="HET9010370.1"
                     /translation="MRRERVRDLLAQVADGSLAVERALDSLALEPTESLGFATIDHHR
                     ALRQGFPEVIYGGGKTPEQIVAIAGRIAERGDGVLVTRVPADAVRPLSDAIAGIEHNT
                     LAATAFLRPAVPPTAAKASVLVVTAGTSDLPVAEEAAVTADAMGCRAERLTDVGVAGI
                     HRLLSRRDALEGAGVIIVVAGMDGALASVVGGLVRVPVIAVPTSIGYGAAFHGLAPLL
                     TMLNSCAAGVTVVNIDNGFGAAVAAARILHG"
     gene            3331..>4412
                     /locus_tag="VFN38_01085"
     CDS             3331..>4412
                     /locus_tag="VFN38_01085"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HET9010371.1"
                     /translation="MASLAAAGLSWRRARRLRADLAAAQRRLELLGAPLGDDGEERRA
                     VGAAALRRDERLKFDTDEEGYYRRLRKLLLADFRDVAGADEAVFWRWNETNDGLVADS
                     WSSDGSTPEHFDFAEWGPLVQWSAETGVIQTVGHEELVIVGAACVLQEESVIGVLTLT
                     RADGLALPRPSLKAWMPRMAAQLGAFKELVDVRKSYGRHMRQSQALLDAVQRLQGFQK
                     GEGLARALCETALEVSAGRGATLIRWYPESDRGEIHHATAGTGLAGRDGSVPSIALGA
                     RSLVADACRNGAPHVLDDARAQGSGEDLYGVRRRLGNPGAVAILPLTKGDRVLGALVI
                     EADAPAGLTLDEIRPLAVLGVVVASSL"
BASE COUNT          642 a         1514 c         1585 g          671 t
ORIGIN      
        1 tgcttcgtct gcacgagcgc gaccaggtcg aacgcacgat gcggacgcac atggggatca
       61 agctcgtcac ggtggacgca tcccgacgtt tcctcgacgc gctgaaggac gtcgaggatc
      121 ccgaggccaa gcggcgggcc atcgggcaca ccttcatcga cgtgttcgag gaggcgacgg
      181 cgaccgccgg gacgcacgcg aagttcctcg tgcagggcac gctctacccg gacgtgatcg
      241 agagctcgtc gcccaccggc gggccgtccg tgacgatcaa gacgcaccac aacgtcggcg
      301 gcctgaagcc gggaatgcag ttctcgctca tcgagccgtt gcgcgagctg ttcaaggacg
      361 aagtgcgcaa cgtcgggcgc gagctcgggc tctccgagga gatggtgggg cggcatccgt
      421 ttccggggcc ggggctcgcc atccgcgtgc tcggggaggt gaacgagccg tcgctcaagg
      481 tgctgcgcca ggccgacgcg atctaccttg aggagatccg gtcggcgaac ctctacaacg
      541 agatctggca ggcgttcgcc gtgctgctgc cggtgcgcag cgtcggcgtg atgggcgacg
      601 agcggacgta cgacaacgtc gtcgcgctgc gggcggtcac cagcacggac ggcatgacgg
      661 ccgactggtt cccgttcccg cacgacgtga tggcgcgtat ctccaaccgc atcatccgcg
      721 aggtggacgg ggtgaaccgg gtcgtgtacg acgtgagctc caagccgccc gcgacgatcg
      781 agtgggagta gggcggtagg gcggtgaagc ggtgaagcgg tagggcgcct caccgcccga
      841 ccgctacacc cctttttcct tcagcagctc caggaactgc ttcggctcgg tgaggccgag
      901 cagccgctgc ggcacgtcgg gctccttgga gaactgggcg atcttgccga gcaccgggag
      961 gtactggttc gagacttcca gcggcggcgc gacgatgagg aagaagaagt tcaccggctt
     1021 ctcgtcgatc gccttgaagt ccacgccgcg cggcttccgc ccgaaggcga cccgcagctt
     1081 gttgacgacg agcgaccggc agtgcgggat cgcgatgccg cggccgatcc cggtggagcc
     1141 caggttctcg cgccgcttga gcatcttgta gagcatcccc tccgacttct cgtccagctt
     1201 gagcagggcg atgagctcct tcaggatgtc gtcctcgact ctccctcgag ctcgagcttg
     1261 attgcgtctt cgctgaagaa ctcgcgcagt tccatctcgg tggatccggt gctggacagt
     1321 gctgggccgt tggcggcggc gtatcgtcgt gggcgaaccg gggaaactac ccgggcacga
     1381 ggggacttgt caaacctcgg cgttgcttgg agttccgcgt tttggtaact tttcctgatg
     1441 cgtttcccct ttccgctcga cgccgaggtc cccctctatc tcgcgcccat ggccggcgtg
     1501 tcggaatcgc cgttccggca gctctgccac gagcacgggg ccgacgtcgt cgtcacggag
     1561 ttcctgtcgg ccgaggggat ccggcgcgag aacgaggcga ccatccacaa gctgtcgttc
     1621 ggcccgggcg agcggcccat cggcgtccag atcttcggcg ccgatccggt ggccatgggc
     1681 gaagcggcgc gcttcgtctc cgacatcttc cagcccgagt tcatcgacat caacttcggc
     1741 tgcccggtga agaaggtcgt ccggcgcaac ggcggctccg gctgcctgcg cgacctcgac
     1801 ctcgtccagc aggtcatccg cgccgtctcg gccgcgacgc acctgccggt gacctgcaag
     1861 atccgcagtg gctggaacga ggagatgcgc gatccggtgc gcatcgcgct gaagtgccag
     1921 gacgccggcg cccgggtcat cgcgctgcat ccccgcacgc ggacgcagat gtactccggc
     1981 agcgcgcggt gggaggagat cgccgccgtg gtggaggcgg tggacatccc ggtgctcggc
     2041 aacggcgaca tcaagaccgc cgaggacgcc gtgcgcatgc gtacccagac gaaatgtgcc
     2101 ggcatcatga tcgcccgggg ctcgtacggc cagccgtgga tcttcgacca ggtgaaggac
     2161 ctgctggccg gccggcccaa gcgcccggcg ccggcggtgg cggagcggtt cgccatcgcg
     2221 ctggaccacg cgcgcaaggt catggcctac gagaccgacc cccgcggcgc ggccatcgag
     2281 ttccgcaagc acctcggctg gtacgccaag ggcctccacg ggggtgccga gcttcgcaag
     2341 aagctctacg cggtgacctc gttcgccgag gtggagggga tcttcgccga ctacctggcc
     2401 aacgccgagc gctatgcggc gtcggcggag atcgcggcgg acgcgggcga cgacggcctc
     2461 gaggccgacg cggcatgagg cgggagcggg tccgcgatct gctcgcgcag gtcgcggacg
     2521 gctcgctcgc cgtcgagcgg gcgctcgatt ccctggcgct cgaacccacc gagtcgctcg
     2581 gcttcgcgac gatcgaccac catcgcgccc tccgccaggg atttcccgag gtgatctacg
     2641 gaggcggcaa gacgccggag cagatcgtgg ccatcgccgg ccgcatcgcg gagcgggggg
     2701 acggcgtgct cgtcacgcgg gtgcccgcgg atgcggtgcg gccgctgagc gacgccatcg
     2761 ccggcatcga gcacaatacg ctggcggcga cggccttcct ccgtccagcc gtcccgccca
     2821 ccgcggcaaa ggcgtcggtc ctcgtggtca ccgcgggaac gagcgacctt cccgtcgccg
     2881 aggaggccgc cgtgacggcg gacgcgatgg gctgtcgcgc cgagcgcctc accgacgtgg
     2941 gcgtggcggg gatccatcgg ctgctgtcgc gccgcgacgc gctcgagggc gccggggtga
     3001 tcatcgtggt cgccgggatg gacggcgcgc tggcgtcggt cgtgggcggc ctggtgcgcg
     3061 tgccggtcat cgcggtgccc accagcatcg gctacggcgc ggcgttccac ggactcgccc
     3121 cactgctcac catgctcaac agttgcgccg ccggagtaac cgtcgtcaac atcgacaacg
     3181 ggttcggggc ggccgtggca gccgcgcgca tcctgcacgg ctagcgagcg cctctccctt
     3241 ttccaccgca tcgcggtgga ttcgtcgccg tctccccccc gagtcgccgc accgtccatc
     3301 atgctgctcc aggcggccgc cctcactgcc ttggcctccc tcgctgccgc cggcctctca
     3361 tggcggcggg cgcgtcggct tcgcgccgac ctggcggcgg cgcagcgccg gctggagctg
     3421 ctcggcgccc ccctcggcga cgacggcgag gagcgacgcg ccgtgggagc cgccgcgctc
     3481 cggcgagacg agcgcctcaa gttcgacacc gacgaggaag gctactatcg ccgcctccgg
     3541 aagctcctgc tcgccgactt ccgcgacgtg gcgggcgccg acgaggcggt gttctggcgc
     3601 tggaacgaga ccaacgacgg gctcgtggcc gacagctggt cgtccgacgg atcgacgccc
     3661 gagcacttcg acttcgcgga gtggggaccg ctcgtgcagt ggtcggcgga gacgggcgtg
     3721 atccagaccg tcgggcacga ggagctcgtc atcgtgggcg ccgcctgcgt gctccaggag
     3781 gaatccgtga tcggcgtcct caccctcacg cgcgccgacg gcctcgccct ccctcgcccc
     3841 tcgctcaagg cgtggatgcc gcggatggcg gcgcagctcg gcgcgttcaa ggagctggtg
     3901 gacgtccgca agagctatgg ccgccacatg cgccagagcc aggcgctcct cgacgccgtg
     3961 cagcggctgc agggcttcca gaagggggaa gggctggctc gcgcgctgtg cgagaccgcg
     4021 ctcgaagtct ccgcagggcg tggggccacc ctgatccgct ggtatccgga gtcggatcgc
     4081 ggagagatcc accacgccac cgccggcacc ggcctcgcgg ggcgggacgg aagcgtcccg
     4141 tccatcgcgc tcggcgcgcg aagtctcgtc gccgacgcgt gccgcaacgg ggcgccgcac
     4201 gtgctggacg acgcgcgcgc gcagggctcg ggggaagatc tctacggcgt gcggcggcgg
     4261 ctgggcaacc cgggagcggt ggccatcctg ccgctcacca agggggaccg ggtgctcggg
     4321 gcgctggtga tcgaggcgga cgcgccggcg gggttgaccc tggacgagat tcgcccgctg
     4381 gcggtgctcg gcgtcgtcgt ggccagctca ct
//
LOCUS       DASSYW010000067         4483 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1269727, whole genome shotgun sequence.
ACCESSION   DASSYW010000067 DASSYW010000000
VERSION     DASSYW010000067.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4483)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4483)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4483
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1269727"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..312
                     /locus_tag="VFN38_01090"
     CDS             <1..312
                     /locus_tag="VFN38_01090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pili twitching motility protein PilT"
                     /protein_id="HET9010372.1"
                     /translation="VPRADKPGRVPACEVLINTQTVRDQIRDMDKTLNIPDLIKEGTV
                     QYGMQSFDQALMGYYSQGIISYESAVFYATSPSEFALRVQGVAGTSDTSWSGFETDST
                     G"
     gene            323..1678
                     /gene="accC"
                     /locus_tag="VFN38_01095"
     CDS             323..1678
                     /gene="accC"
                     /locus_tag="VFN38_01095"
                     /EC_number="6.3.4.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_function: GO:0004075 - biotin carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HET9010373.1"
                     /translation="MFKKVLIANRGEIALRIIRACRELGVETVAVYSEADRESLHVRF
                     ADDDVCIGPAPARDSYLKIPRLIAAAEITGADAIHPGYGFLAENAEFADIVTASNIAF
                     IGPTGDQIRVMGDKAAARKAMTAVGVPIVPGTPGPVEDVDEALEFARQIGFPVIIKAA
                     AGGGGKGMRVAKDADDFARSFQLARSEALSAFGNGDVYVEKYLMRPRHIEFQILGDKH
                     GNVIHLGERDCSVQRRHQKLIEESPSPAMTPELRKRMGDAAVAGAKAIEYVGAGTIEM
                     LLDEDGSFYFMEMNTRIQVEHPVTEMITGVDLVKEQIRVAAGEPLSVRELPPLRGHVI
                     ECRVNAEDPNRNFQPSPGKIITYHPPGGNGVRIDSHVYAGYSVPPFYDSMIAKVICQG
                     RDRPEALAKMQLALETFIIEGPTTTIPFLARVMQNPRFQSGDVDTKFLEREPDLMKEP
                     G"
     gene            1680..2426
                     /locus_tag="VFN38_01100"
     CDS             1680..2426
                     /locus_tag="VFN38_01100"
                     /inference="COORDINATES: protein motif:HMM:NF015962.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-phosphosulfolactate phosphatase"
                     /protein_id="HET9010374.1"
                     /translation="MRVDVLFGVQQLTPQDVQGRVVAVIDVLRASTTIAVALANGARA
                     VIPFESSEEAVMRSKQMERGAFRLAGERRMLKMEGFDLGNSPVEHTVEAVEGKTVLLT
                     TTNGTKALLSVQGARDVVVASYVNLTGVSTMLRAALRGGADITLVCAGHDRQFALEDA
                     ACAGRYVSNISKRLADIDLNDAALASSLLDRKYGDNLLRLFNTAAHGRALAAAGFEGD
                     LAACAAVDSFPVIPIYQDRLITKLGPERER"
     gene            2432..>4483
                     /locus_tag="VFN38_01105"
     CDS             2432..>4483
                     /locus_tag="VFN38_01105"
                     /inference="COORDINATES: protein motif:HMM:NF013727.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015616 - DNA translocase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HET9010375.1"
                     /translation="MGSSSLRRELVGIALLLSAVFLAGALLSLALRGVGAGFDMGPVG
                     RLLSEPLVAFLGWPAAALVPAVPAVHALRLFGRLESETDRSWMIFFAGVVALLPIAIG
                     LGANAPQGDYSPSSGLWGGFIAFYWRSWFGSAGAWVVVALAASALTAATLRWNPVRML
                     VGRAAAPVPEAAASPAEPADEPYAPPRRRRKKGEPKDLALSLEPAPEEFAAISDPLDA
                     MRASSSADADAKEDAAIEEAAKRRGRKGKDQPSKPGRDQEIAAAIGATAQPEASSEEL
                     PPADLLNLPTPRNVELGKRELDAMGAKLMDALRTFKVDGELVGRTTGPVVTQFEVEPA
                     PGVKVRQIANLSNDLALAMRAPSIRIVAPIPGRGAVGVEVPNPTPEMVGFREMIEHPD
                     FRSARAALPIALGKDLEGKPVIADLAKMPHLLIAGATGSGKSVCVNTIITSLVYRHTP
                     RTLRFLMVDPKMVELSVYNTLPHLRHKVITDNRDAAAVLKWAVMEMQERYELLAANGC
                     RNLQDFNQRVQKETPLRKPRDRSVAFEDDVYRGGILPYIVVVIDEMADLMMTVQGEVE
                     TPIAMLAQKARAIGIHLILATQRPSVNVITGLIKANFPSRIAFRVASQVDSRTIIDGA
                     GAEMLLGNGDMLFIPPGKSEASRLQGAYLSSEETEKLMGWYEAQRDRRRAELAAAGLM
                     VE"
BASE COUNT          703 a         1571 c         1576 g          633 t
ORIGIN      
        1 gtcccgcggg ccgacaagcc cggacgcgtt ccggcgtgcg aggtcctcat caacacccag
       61 acggtgcgcg accagatccg ggacatggac aagacgctca acattccgga tctcatcaag
      121 gaggggacgg tgcagtacgg gatgcagagc ttcgaccagg cgctgatggg ctactactcg
      181 caggggatca tctcctacga gagcgccgtg ttctacgcca cgagccccag cgagttcgcg
      241 ctgcgcgtgc agggcgtggc cggtaccagc gacacgagct ggtccggctt cgagaccgac
      301 tccaccggct gagcgcgcac cgatgttcaa gaaggtactg attgccaatc gcggcgagat
      361 cgcgctgcgc atcatccgcg cgtgccgcga gctcggcgtc gagaccgtcg ccgtctactc
      421 cgaggccgac cgcgagtcgc tgcacgtgcg cttcgccgac gacgacgtct gcatcgggcc
      481 cgcgccggcg cgcgactcct acctcaagat cccgcggctc atcgccgccg ccgagatcac
      541 cggcgccgac gcgatccacc cgggctacgg cttcctcgcc gagaacgcgg agttcgccga
      601 catcgtgacg gccagcaaca tcgccttcat cggccccacc ggcgaccaga tccgcgtgat
      661 gggcgacaag gcggcggccc gcaaggcgat gaccgccgtg ggcgtgccga tcgtgcccgg
      721 cacccccggt ccggtggagg acgtcgacga ggcgctggag ttcgcgcgcc agatcggctt
      781 ccccgtgatc atcaaggcgg cggccggcgg cgggggcaag gggatgcgcg tcgccaagga
      841 cgccgacgac ttcgcgcgct ccttccagct cgcgcgcagc gaggcgctct cggcgttcgg
      901 caacggcgac gtgtacgtcg agaagtacct gatgcgcccg cgacacatcg agttccagat
      961 cctcggcgac aagcacggca acgtgatcca cctgggcgag cgcgactgct cggtccagcg
     1021 ccggcaccag aagctgatcg aggagtcgcc gagcccggcg atgacccccg agctgcggaa
     1081 gcggatgggc gacgccgccg tggccggcgc caaggccatc gagtacgtgg gcgcggggac
     1141 gatcgagatg ctcctcgacg aggacggatc gttctacttc atggagatga acacccgcat
     1201 ccaggtcgag cacccggtga cggagatgat caccggtgtc gacctggtga aggagcagat
     1261 ccgcgtggcg gcgggcgagc cgctctccgt gcgcgagctt cccccgctgc ggggccacgt
     1321 gatcgagtgc cgcgtgaacg cggaggaccc caaccgcaac ttccagccgt cgcccgggaa
     1381 gatcatcacg taccatccgc ccggcggcaa cggcgtgcgc atcgactcgc acgtgtacgc
     1441 gggctacagc gttcccccgt tctacgactc catgatcgcg aaggtcatct gccagggccg
     1501 cgaccggccc gaggcgctcg cgaagatgca gctggcgctg gagacgttca tcatcgaggg
     1561 cccgacgacc accatcccct ttctcgcgcg ggtcatgcag aacccccgct tccagagcgg
     1621 cgacgtggac acgaagttcc tggagcggga gcccgacctg atgaaggagc ccggctagcg
     1681 tgcgagtcga cgtgttgttc ggggtgcagc agctcacgcc ccaggatgtg cagggacggg
     1741 tcgtggcggt catcgacgtc ctccgggcct ccacgacgat cgccgtggcc ctggcgaatg
     1801 gcgccagggc ggtgatcccg ttcgagagct ccgaggaggc cgtgatgcgc tccaagcaga
     1861 tggagcgcgg cgcgttccgc ctggcggggg agcgccggat gctgaagatg gagggattcg
     1921 acctcggcaa ctcccccgtg gagcacaccg tcgaggccgt ggaggggaag acggtgctcc
     1981 tcacgacgac gaacggcacg aaggcgctgc tgtcggtgca gggggcgcgt gacgtcgtgg
     2041 tcgcgtcgta cgtcaacctc acgggcgtca gcaccatgct gcgcgccgcg ctgcgcgggg
     2101 gggcggacat cacgctcgtc tgcgccggcc acgaccgcca gttcgcgctc gaggacgccg
     2161 cctgcgcggg ccggtacgtg tccaacatct ccaagcggct cgcggacatc gacctcaacg
     2221 atgccgcgct ggcctcgtcg ctgctggacc ggaagtacgg cgacaacctg ttgcggctct
     2281 tcaacaccgc ggcgcatggc cgggccctgg ccgccgcggg attcgaaggg gatctggcgg
     2341 cgtgtgcggc cgtggactcg ttcccggtca tcccgatcta ccaggaccgt ctgatcacca
     2401 agctggggcc cgagcgcgag cggtaatctc cgtgggcagt tccagtctca ggcgcgagct
     2461 cgtcggcatc gcgctcctcc tctccgccgt gttcctcgcc ggcgccctgc tgtcgctggc
     2521 gcttcgtggc gtgggcgccg gcttcgacat gggtcccgtc gggcgcctgc tgtccgagcc
     2581 cctcgtcgcc tttctcggct ggcccgccgc cgccctcgtc cccgccgtgc ccgccgtcca
     2641 cgccctgcgc ctgttcgggc gcctggagtc ggagaccgac cggtcgtgga tgatcttctt
     2701 cgccggcgtc gtcgcgctgc tgcccatcgc catcgggctg ggcgccaacg cgccgcaggg
     2761 ggactactcc ccctcgtccg gcctgtgggg cgggttcatc gccttctact ggcggtcctg
     2821 gttcggcagc gccggtgcgt gggtcgtcgt cgcgctggcg gccagcgcgc tcacggcggc
     2881 caccctgcgc tggaacccgg tgcgcatgct cgtcggccgc gcggcggctc cggtgccgga
     2941 ggcggctgcc tccccggccg agccggccga cgagccgtat gcccccccga ggcgccgccg
     3001 gaagaagggc gagcccaagg acctcgccct ctccctggag cccgcacccg aggagttcgc
     3061 cgcgatcagc gatccgctcg acgccatgcg tgcgtcgtcg tcggcggatg ccgacgcgaa
     3121 ggaggacgcc gcgatcgagg aggcggcgaa gcggcgcgga cgcaagggca aggaccagcc
     3181 gtcgaagccg ggccgcgacc aggagatcgc cgcggcgatc ggcgccacgg cgcagcccga
     3241 agcgtcgagc gaggagctgc cccccgccga cctgctcaat ctgcccacac cccgcaacgt
     3301 ggagctgggg aagcgggagc tggacgcgat gggcgcgaag ctcatggacg ccctgcgcac
     3361 gttcaaggtg gacggtgagc tcgtcgggcg gaccaccggg ccggtcgtca cgcagttcga
     3421 ggtggagccg gcgccgggcg tgaaggtgcg ccagatcgcg aacctctcca acgacctcgc
     3481 gctggcgatg cgcgcgccct ccatccgcat cgtcgcgccc attcccgggc gcggcgcggt
     3541 gggcgtcgag gtgccgaacc cgacgcccga gatggtgggc ttccgcgaga tgatcgagca
     3601 tcccgacttc cgcagcgcgc gggcggcgct ccccatcgcg ctcggcaagg acctggaagg
     3661 caagccggtg atcgccgacc tggcgaagat gccgcacctg ctcatcgccg gcgccaccgg
     3721 ctcgggcaag tcggtgtgtg tgaacaccat catcacgagc ctcgtgtacc gccacacgcc
     3781 gcgcaccctg cgcttcctga tggtggaccc gaagatggtg gagctgtccg tgtacaacac
     3841 cctgccgcac ctgcggcaca aggtgatcac ggacaaccgc gacgccgcgg ccgtgctgaa
     3901 gtgggcggtg atggagatgc aggagcgcta cgagctgctc gcggcgaacg gctgccgcaa
     3961 cctgcaggac ttcaaccagc gggtgcagaa ggagaccccg ctccggaagc cgcgcgaccg
     4021 cagcgtcgcg ttcgaggacg acgtgtatcg cggcggcatc ctgccgtaca tcgtcgtggt
     4081 gatcgacgag atggccgacc tcatgatgac ggtgcagggc gaggtggaga cccccatcgc
     4141 catgctggcg cagaaggcgc gcgccatcgg catccacctc atcctcgcca cccagcggcc
     4201 gagcgtgaac gtgatcacgg gcctcatcaa ggcgaacttc ccgagccgga tcgccttccg
     4261 cgtcgcctcg caggtggaca gccgcacgat catcgacggc gcgggcgccg agatgctgct
     4321 cggcaacggc gacatgctgt tcatcccgcc cggcaagagc gaggcgagcc ggctccaggg
     4381 cgcgtacctg tccagcgagg agacggagaa gctgatgggg tggtacgagg cacagcgaga
     4441 ccgccgccgg gccgagctgg cggcggccgg cctgatggtc gag
//
LOCUS       DASSYW010000068         2085 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_293004, whole genome shotgun sequence.
ACCESSION   DASSYW010000068 DASSYW010000000
VERSION     DASSYW010000068.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2085)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2085)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2085
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_293004"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..833)
                     /locus_tag="VFN38_01110"
     CDS             complement(<1..833)
                     /locus_tag="VFN38_01110"
                     /inference="COORDINATES: protein motif:HMM:NF024873.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease H-like domain-containing protein"
                     /protein_id="HET9010376.1"
                     /translation="MSGLADRIRGIVRAPGSKGHGLQPSATGRVPLDPPSVPDIEAVL
                     GGEWRDAGGARCFVVERRIEPAARHGRDDIGTLADWMTQGTPDAVLFAGGAAARAPFV
                     FFDLETTGLSGGAGTHAFLVGCARFDADRRFATTQFLLTRPAHERTLLDMVAGELGGA
                     GALVSFNGKSFDAPMLETRYLFHRVDWSVAGIPHVDALHPARRFWPGDCSLIALERQM
                     LGARRRGDVPQAEIPARYFQFVRSGDARPLAAVLEHNRLDLLTLAALTARLLRLVAVG
                     PA"
     gene            complement(830..>2085)
                     /locus_tag="VFN38_01115"
     CDS             complement(830..>2085)
                     /locus_tag="VFN38_01115"
                     /inference="COORDINATES: protein motif:HMM:NF020926.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Zn-binding domain-containing protein"
                     /protein_id="HET9010377.1"
                     /translation="IDIGALDVAVLAGYPGTIAATWQRAGRAGRRTNRSAAVMVASSA
                     PLDQFVVRNPSYFFDASPEHALIDPDNLHILVDHVKCAAFELPFAADEAFGRHDVQEI
                     LGVLAEQGLVHQPEPGGPWTWTTESYPADAVSLRSVSSDNFVVVDTTDETRVIGETDF
                     TSGPSTLHPKAIYIVEAKLYQVERFDFEGRKAFVREIDCDYYTTAITYTKVTEIDAFA
                     TESLRSHGEVHVVSRVVGFKKIKFYTNENVGSGELDLAEQQMHTTSYWLTIAPEVMAQ
                     LPFAADDRRDGVVGLAYAMRQVAQLLLMCDGHDIGISIDGLEAVRLARAELVEGSARS
                     GEAPSAERQTRIFGYDNYPGGIGFSAPLYEMHDELLASTRRLIAECPCEAGCPGCVGP
                     MGTTGPLAKAAALRMLNLLVEVAVA"
BASE COUNT          360 a          718 c          687 g          320 t
ORIGIN      
        1 gcgggtccga cggcgaccaa ccggaggagc cgggccgtga gcgccgccag cgtcaacaag
       61 tccagccgat tgtgttcgag cacggccgcg agcgggcgcg cgtcgccgct gcggacgaac
      121 tgaaaatacc gcgccggaat ctccgcctgc ggcacatcgc cgcgacgccg cgcgcccagc
      181 atctgccgct ccagcgcgat cagcgaacag tcgcccggcc agaaacggcg cgctgggtgg
      241 agggcgtcaa cgtgcgggat gcccgccacc gaccagtcga cgcgatggaa cagataccgg
      301 gtctcgagca tcggcgcgtc gaacgacttg ccgttgaagc tcaccagcgc accggcgccg
      361 ccgagttcgc cggcgaccat gtcgagcaga gtgcgctcgt gcgccggcct ggtgagcagg
      421 aactgtgtcg tcgcaaatcg gcgatcggca tcgaagcggg cgcagccgac gagaaacgcg
      481 tgcgtaccgg caccgccgct caggcccgtg gtctcgaggt cgaagaacac gaacggcgcg
      541 cgggcggccg caccgccggc gaataacacc gcatcgggcg tgccctgagt catccagtcg
      601 gccagcgtgc cgatgtcgtc gcggccgtgg cgcgcagcgg gttctatccg ccgctcgacg
      661 acgaagcagc gcgcgccccc ggcgtcacgc cattcaccgc cgagcaccgc ttcaatgtct
      721 ggaacacttg gcgggtccag agggacccgc cctgtggcgg acggctgtag gccgtgtcct
      781 tttgaacccg gcgcgcgaac gatcccgcga atgcgatcgg caagcccgct catgcgacgg
      841 cgacctcgac caacagattc agcatgcgga gcgcggcggc cttggcgagc ggacccgtgg
      901 ttcccattgg acccacacac ccgggacaac cggcttcgca cgggcactcg gcgatcagcc
      961 ggcgcgtgct cgccagcagc tcgtcgtgca tctcgtacag cggcgcgctg aaaccgatgc
     1021 cgccgggata gttgtcgtac ccgaagatcc gcgtctgccg ctcggctgac ggcgcctcgc
     1081 ctgagcgggc tgacccttcg acaagctcag cacgagcgag tcgaacggcc tccaggccgt
     1141 cgatcgagat gccgatgtcg tgaccgtcgc acatcaggag cagctgcgca acctgtcgca
     1201 tcgcgtaggc aagcccgacg acgccatcgc gccggtcgtc tgccgcaaag ggcagttgcg
     1261 ccatgacttc cggcgcaatc gtcagccagt acgacgtcgt gtgcatctgc tgctccgcca
     1321 gatcgagctc accggagccg acgttctcgt tggtgtagaa cttgatcttc ttgaacccga
     1381 cgacgcgcga gacgacgtgc acctcgccgt gcgatcgcag gctctcggtc gcgaaggcat
     1441 cgatctcggt gaccttcgtg taggtgatcg ccgtcgtgta gtagtcgcag tcgatctcgc
     1501 gcacgaacgc cttgcggccc tcgaaatcga accgctccac ctgatacagc ttcgcctcga
     1561 cgatgtagat cgccttggga tggagcgtcg acggcccgct cgtgaagtcg gtctcgccga
     1621 tgactcgcgt ctcgtcggtc gtgtcaacga cgacgaagtt atccgagctc accgatcgca
     1681 agctcaccgc atccgccgga tacgactccg tcgtccacgt ccacggtcct cccggttccg
     1741 gctgatggac gagaccctgc tccgccagca cgccgagaat ttcttggacg tcgtgacgac
     1801 cgaaggcttc gtcggcggcg aacggcagct cgaacgccgc gcatttgacg tggtccacga
     1861 ggatgtggag gttgtcggga tcgatcagcg cgtgctccgg cgaggcgtcg aagaaataag
     1921 acgggttgcg gacgacgaac tgatcgagcg gggcgctgct cgccaccatc accgccgccg
     1981 atcggttggt tcggcggccg gcgcggccgg cgcgctgcca cgttgccgcg atcgtgcccg
     2041 gatagccagc caggaccgcc acgtccagcg cgccgatgtc gatgc
//
LOCUS       DASSYW010000069         4427 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_513836, whole genome shotgun sequence.
ACCESSION   DASSYW010000069 DASSYW010000000
VERSION     DASSYW010000069.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4427)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4427)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4427
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_513836"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1739)
                     /locus_tag="VFN38_01120"
     CDS             complement(<1..1739)
                     /locus_tag="VFN38_01120"
                     /inference="COORDINATES: protein motif:HMM:NF013592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family aminopeptidase"
                     /protein_id="HET9010378.1"
                     /translation="MDDARPAAVACGMLTALALAHLLAAAGSAASRAPASASADSLTV
                     RGVSRQLAEYRASRIRNVRYELTLDVTRRDTATGRVVVRFDRAKGGDAILDFRGLRLG
                     SPTVNGRATALAGDGAHLRIPAALLRAGPNSVELDFASAIAPAGASIIRYHDSTDDTD
                     YLYTLLVPSDANALFPCFDQPDLKARVTLTLVTPRGWKALGNGALAGSDSAGASTTTH
                     RFRQSDPISTYLVAFAAGPWATRTAMVRGRPVSLWARASRMKDVEVDTLIATNARALE
                     WLERYTARPFPFQKFDFLLAPAFPFGGMEHPGAVFYNEESFIYREPPTRTQLLGREAT
                     IYHEVSHQWFGDLVTMRWFDDLWLKEGFATYISAVMQDDLSPHASAWRSFFLRNKPAA
                     YATDASRGTTPVWQSLANLDQAKSNYGAIVYNKAPGILKQLDYLVGDTVFRDGLRAYL
                     AAHAYGNATWTDLLDAIGGDGKPDPARARADLAQWGRQYILRPGIPVITQRVVPQPGG
                     WSLTLTQAPAQPLSGPASWPIRTRVLVVDSGGASRTIPMLLTSAHTIRTFTGPLPAMV
                     FANAGDQAYALVHL"
     gene            complement(1801..2733)
                     /locus_tag="VFN38_01125"
     CDS             complement(1801..2733)
                     /locus_tag="VFN38_01125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010379.1"
                     /translation="MVLWPTALLVGCATADQLTAPRASDDQLTAARPPAAASALAAGH
                     EANLRALIAAARRSLATRHRGAIITRGSASGKQETVSLADVLREHEEHLTAMLARQSS
                     QRASGARFSTAPTGAGASLSVPAGAGGASTDEIPDENPNVPPTITRFGSVVVGGSSGS
                     AAASVAWSSFTVYQAKNAMSVASDHPTLNLVHDWSSYLQSGQGPDPRRPFEMFSEWEI
                     QGFGDCEVLRSGTTHNIRSWWSGANEAGSVATWDPQCQTRVVSPDGGSVDLVEAIGIP
                     ETQADTWHCWLNQVRWFENGAWGPWITTSMECGY"
     gene            complement(2835..4115)
                     /locus_tag="VFN38_01130"
     CDS             complement(2835..4115)
                     /locus_tag="VFN38_01130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010380.1"
                     /translation="MRTRLLHLLAFAAFIIPCPRARAQACLAAARPTFVTTPRGDSLE
                     IVSPSLLPLADGLLMFGSGATIFRADAPPRVEAPLLAVRLRRGTVEMIAPPAPGGRYL
                     YPRVAQDARGGIHLLWGEPDTARTLPAARGGAAESGSELTQALWAADYLSGAWSPPRR
                     LGTVPGTMWSAVSPSRPTGRSSVMTAVGYIGPRGRGVVDIHHADRSRWTVQSVVTDGL
                     TAYTSVAPAGGGLVVGYIAVESGGELRPRNTVFITDSLPGDSAWSRPIALGGPGDQAA
                     TMLALLPGRAGTVHAVWGQNLDGGLHAQAIRHATLDLRGRVQSPPRDLRVSGVVQALH
                     AEPDARGGAHVVFQGTGADDRPRAYYAYWSPTRGWSRPASLSGDAYSRAPAIAATTGD
                     SVYITWAAHIGMTGPFPRFATAVVRAGSGARCVP"
BASE COUNT          611 a         1490 c         1727 g          599 t
ORIGIN      
        1 aggtgcacca gcgcgtacgc ctggtcgccg gcgttggcga acaccatcgc gggcagcgga
       61 cccgtgaagg tgcggatcgt gtgcgcgctg gtgagcagca tcgggatggt gcggctggcg
      121 ccgccggaat cgacgacgag cacgcgggtg cggatgggcc acgacgccgg ccccgagagc
      181 ggctgcgcgg gcgcctgggt gagggtgagc gaccaccctc ccggctgcgg gaccacgcgc
      241 tgcgtgatca cggggatgcc cggccggagg atgtactgcc gcccccactg ggccaggtcg
      301 gcgcgcgcgc gcgcgggatc cggcttgccg tccccgccga tggcgtcgag caggtcggtc
      361 cacgtcgcgt tcccgtacgc atgcgcggcg agatacgcgc gcagcccgtc gcgaaacacc
      421 gtgtcgccaa ccaggtagtc gagctgcttg aggatccccg gcgccttgtt gtacacgatc
      481 gcgccgtagt tgctcttggc ctggtcgagg ttggcgagcg actgccacac gggggtggtg
      541 ccgcgcgagg cgtcggtggc gtaggccgcg ggcttgttgc gcaggaagaa ggagcgccac
      601 gcgctggcgt gcgggctcag gtcgtcctgc atcaccgcgg agatgtacgt cgcgaaccct
      661 tccttgagcc acaggtcgtc gaaccagcgc atcgtcacga ggtcgccgaa ccactggtgc
      721 gacacctcgt ggtagatggt cgcctcgcgg ccgaggagct gggtgcgcgt ggggggctcg
      781 cggtagatga acgactcctc gttgtagaac accgcgccgg gatgctccat cccgccgaag
      841 ggaaaggccg gcgcgaggag gaagtcgaac ttctggaagg ggaaggggcg cgcggtgtag
      901 cgctccagcc actcgagggc ccgcgcgttg gtggcgatga gggtgtccac ctcgacgtcc
      961 ttcatgcgcg acgcgcgcgc ccacaggctc accggcctgc cgcgcaccat cgcggtccgc
     1021 gtcgcccacg ggccggcggc gaaggcgacg agataggtgc tgatggggtc ggactggcgg
     1081 aaccggtgcg tggtggtgct ggcgccggcg gaatcgctgc ccgcgagcgc gccgttgccc
     1141 agcgccttcc agccgcgcgg cgtgacgagg gtgagggtga cgcgcgcctt gaggtcgggc
     1201 tggtcgaagc agggaaagag ggcgttcgcg tccgacggca cgagcagggt gtacaggtag
     1261 tcggtgtcgt cggtgctgtc gtggtagcgg atgatgctcg cgccggcggg ggcgatggcc
     1321 gacgcgaagt ccagctcgac ggagttcggg ccggctcgca ggagggcggc ggggatgcgg
     1381 agatgcgcgc cgtcgccggc gagggcggtc gcgcggccgt tcaccgtggg gctgccgagc
     1441 cgcaggccgc ggaagtcgag gatcgcgtcg ccgcccttcg cgcggtcgaa gcggacgacg
     1501 acgcggccgg tcgcggtgtc ccggcgggtg acgtccaggg tgagctcgta ccgcacgttc
     1561 cggatgcggc tggcgcgata ctcggcgagc tggcgcgaga cgccccgcac ggtgagggaa
     1621 tcagcggagg cggaggcggg cgcgcgagag gcggcgctgc cggcggcggc gagcaggtgc
     1681 gcgagggcga gggcggtgag catgccgcaa gctaccgcgg cggggcgcgc gtcgtccacg
     1741 cgccgccgcc gggcgagatc ggcccctccg ccgatcgacc ttcgctgatc gtgtcgcggc
     1801 tcagtagccg cactccatgc tcgtggtgat ccacggcccc cacgcaccgt tctcgaacca
     1861 gcgaacctgg ttcagccagc agtgccaggt atcggcctgg gtctcgggaa tgccgatcgc
     1921 ttcgacgagg tccacggaac cgccgtccgg actgacgacc ctggtctggc actggggatc
     1981 ccaggtcgcg acggagcccg cctcgttcgc ccccgaccac cacgagcgga tgttgtgcgt
     2041 ggtgcccgag cgcagcacct cacagtcgcc gaagccctgg atctcccact cggagaacat
     2101 ctcgaacggg cggcgcggat cggggccctg cccggattgc aggtagctcg accagtcgtg
     2161 cacgaggttg agcgtgggat ggtcggaggc gacgctcatc gcgttcttcg cctggtagac
     2221 ggtgaacgac gaccaggcga ccgaggccgc ggccgatccg ctcgaccctc cgaccacgac
     2281 ggagccgaat cgagtgatcg tgggagggac gttcgggttc tcgtccggga tctcgtcggt
     2341 ggaggcgccc ccggcgccgg ccgggacgga gagcgacgca ccggcgccgg tgggcgcggt
     2401 gctgaagcgc gcgccgctcg cgcgctgcga gctctgacgc gcgagcatcg cggtgaggtg
     2461 ctcctcgtgc tccctgagca cgtcggcgag cgacacggtc tcctgctttc ccgacgccga
     2521 cccgcgggtg atgatggcgc cgcggtggcg cgtggccagg ctgcgccgcg cggcggcgat
     2581 gagtgcgcga aggttcgctt cgtggccggc ggcgagcgcg ctcgccgcgg ccggtggccg
     2641 ggccgcggtc agctggtcgt cggacgctcg cggcgcggtg agctggtcgg cggtggcaca
     2701 gccgaccagg agggcagtcg gccacagtac cattcctgct cgtggtatgg agaacatgtc
     2761 atcacctcga gtgacggtgc ggtgctgcca cggaccacgt catccgccct tgacggtccg
     2821 gtcctcgttt ctgttcaggg cacgcaccgg gcgccgctgc cggcccgcac caccgcggtg
     2881 gcgaagcggg ggaaggggcc cgtcatgccg atgtgcgccg cccatgtgat gtagacgctg
     2941 tcgcccgtgg tggcggcgat ggccggggcg cggctgtacg cgtcgccgct cagggaggcg
     3001 ggccggctcc agccgcgcgt cggcgaccag tacgcgtagt acgcgcgcgg ccggtcgtcg
     3061 gcccccgtcc cctggaacac cacgtgcgct cccccccgcg cgtccggctc ggcatgcagc
     3121 gcctggacga ctccgctcac gcgcaggtcg cgcgggggcg actgcaccct gccgcgcagg
     3181 tcgagcgtgg cgtgccggat ggcctgcgcg tggagcccgc cgtcgaggtt ctggccccac
     3241 acggcgtgca ccgtgccggc gcggccgggg aggagcgcga gcatcgtggc cgcctggtcg
     3301 cccgggccgc cgagcgcgat gggacgcgac catgccgagt cgccggggag ggagtcggtg
     3361 atgaacaccg tgttgcgggg gcgcagctcg cccccggact cgacggcgat gtagccgacc
     3421 acgaggccac cacccgccgg cgcgacgctg gtgtaggcgg tgaggccgtc cgtgacgacc
     3481 gactgcaccg tccatcgcga gcggtcggcg tgatggatgt ccacgacccc gcggccgcgg
     3541 ggcccgatgt atcccacggc ggtcatcacc gacgagcggc cggtgggccg cgacggcgag
     3601 accgcggacc acatcgtccc gggcacggtg ccgagccgcc ggggaggaga ccaggcgccg
     3661 gagagatagt ccgccgccca gagcgcctgc gtgagctccg acccggattc ggccgcgccg
     3721 ccacgcgcgg cgggcagcgt gcgagcggtg tccggctcgc cccacaggag atggatgccg
     3781 ccgcgcgcgt cctgcgcgac gcgaggatac agataccgtc cgccgggagc ggggggtgcg
     3841 atcatctcga cggtgccgcg ccggagccgc accgccagca gcggcgcctc caccctcggc
     3901 ggcgcgtcgg cgcggaagat ggtggcgccg gacccgaaca tcaggagtcc gtccgcgagc
     3961 ggcagcaacg acgggctcac gatctcgagc gagtcgccgc gcggcgtcgt gacgaaggtg
     4021 ggccgcgccg cggcgagaca ggcctgggcc cgtgcacgcg ggcacgggat gatgaacgcg
     4081 gcgaaggcga gaaggtgaag gagtcgggtt cgcatcgatg gccgggatgg gaggtcgcag
     4141 cgtcgtcggg ctccaagggt agcagccgcc gtcatctcac cgtcatcgaa tcagcgtgcg
     4201 cgccatcgct cggcagatcc gcgcgaggcc gaacgcaagg aaggggacgt cgcgagccgc
     4261 gacgtccccc cccttcccgg tgtgccatcc ccgctacacc cgcggcttgc gcaccaccgt
     4321 gagctggagc cgggacggat agcgcctgga gtgatgcacc gtgttgtgcg ccaccagccc
     4381 ctgggtctcc gtcacgttgt cgccccccgt gttcaggttg cggtcga
//
LOCUS       DASSYW010000070         3163 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_919402, whole genome shotgun sequence.
ACCESSION   DASSYW010000070 DASSYW010000000
VERSION     DASSYW010000070.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3163)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3163)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3163
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_919402"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..406
                     /locus_tag="VFN38_01135"
     CDS             <1..406
                     /locus_tag="VFN38_01135"
                     /inference="COORDINATES: protein motif:HMM:NF040139.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010381.1"
                     /translation="VKRYVDECLAGRAGVRGRDFNIRWIASMVAEAHRILMRGGVFMY
                     PRDNQDASRPGRLRLLYEANPVGFLVEQAGGRASTGRQPLLDVTPSSLHQRVGLIFGS
                     RSEVERIERYHHEPRLRDPGSPLFTERSLFRD"
     gene            429..1313
                     /locus_tag="VFN38_01140"
     CDS             429..1313
                     /locus_tag="VFN38_01140"
                     /EC_number="2.7.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008974 - phosphoribulokinase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribulokinase"
                     /protein_id="HET9010382.1"
                     /translation="MSERHPIIAITGSSGAGTTSVTRTFENIFRREKVRAAVIEGDSF
                     HRYDRNEMKLRMAAAERSGNGHFSHFGPENNLFAELERLFHEYAESGTGKRRKYLHDA
                     EEAAPYRQEPGTFTAWEDLPAETDLLFYEGLHGAVVTPEVNIARHPDLLIGVVPVINL
                     EWIQKLWRDKSSRGYSTEAVTDTILRRMPDYVHYICPQFTHTHVNFQRVPCVDTSNPF
                     IARDIPAADESICVIRFANPKGIDFPYLLNMIHNAWMSRANTIVVPGGKMELAMQLIF
                     TPFIWRMMERRQRARDVL"
     gene            1330..>3163
                     /gene="tkt"
                     /locus_tag="VFN38_01145"
     CDS             1330..>3163
                     /gene="tkt"
                     /locus_tag="VFN38_01145"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004802 - transketolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HET9010383.1"
                     /translation="MSSSSDDRVIRADNGQRNEMANALRALAMDAVQQANSGHPGAPM
                     GMAEMAVALWHGHLRHHPANPAWADRDRFVLSNGHASMLLYALLHLTGYDLPVAELKR
                     FRQLHSKTPGHPERGLTPGVETTTGPLGQGLANAVGFALAEKLLADEFNRPGHRIVDH
                     RSYVFLGDGCLMEGISHEACALAGVWKLGKLIALYDDNGISIDGAVQGWFTDDTPARF
                     RAYGWNVIGPLDGHDVGAIGQAIAQAKTSVDRPTLIVCRTTIGKGSPARAGTARAHGE
                     PLGAEEVGHSRAAIGWPHAPFEIPVDLAARWNARETGAAQEAEWRDRFAAYRDAHPEL
                     ASEFERRMAGELPHDFAETLLTVMAECGQSRESWATRKASQKVLAMLAPKLPELLGGS
                     ADLTGSTLTDFPGCGAVRGGARGGRHVNYGVREFGMAAVMNGVALHGGFIPYGGTFLA
                     FSDYSRNAVRMAALMKQRVIHVFTHDSIGLGEDGPTHQPVEHAASLRLIPNLDVWRPC
                     DAAETGVAWTHALAQRDRPSALLLSRQNLPAQQRTPDQVLDIRRGGYVLSDRSDALAV
                     ILATGSEVSLAMAAQRLLDARGIPVRVVSLPSSTVFDRQERSYRE"
BASE COUNT          515 a         1107 c         1069 g          472 t
ORIGIN      
        1 ggtcaagcgc tacgtcgacg aatgcctcgc gggcagggcc ggggtgcgcg gccgggattt
       61 caacatacgc tggatcgcct cgatggtcgc cgaagcccat cgcatcctca tgcgcggcgg
      121 ggtgttcatg tatccgcgcg acaaccagga cgcgtcgcgg ccgggccggc tgcgcctgct
      181 gtacgaagcc aatccggtgg gcttcctggt tgagcaggcc ggggggcggg ccagcaccgg
      241 ccgccagccg ctcctggacg tcacgcccag ctcgctgcac cagcgcgtcg gcctgatctt
      301 cggctcgcgc agcgaggtcg agcgcatcga gcgctatcac cacgagcctc gcctgcgcga
      361 cccgggcagt ccgctgttca ccgagcgaag cctgttccgc gattgacgcc attcccgggc
      421 cccgcaccat gtcggaacga caccccatca tcgccatcac cggctcgtcc ggcgcgggca
      481 ccacctcggt gacccgcacg ttcgagaaca tcttccggcg tgaaaaagtt cgggccgccg
      541 tcatcgaagg cgacagcttc catcgttacg accgcaacga gatgaagctc aggatggccg
      601 ccgcggaacg cagcggcaat ggccacttca gccacttcgg tccggagaac aacctgttcg
      661 ccgagctgga gcgactgttc cacgagtacg ccgaatcggg caccggcaag cgccgcaagt
      721 acctgcacga cgccgaggag gccgcgccgt accggcagga gcccggaacc ttcaccgcct
      781 gggaagacct tcctgcggaa accgacctgc tcttctacga gggactccac ggcgccgtcg
      841 tgacgcccga ggtgaacatc gcgcgccacc ccgacctgct gatcggcgtg gttccggtga
      901 tcaacctcga gtggatccag aagctgtggc gcgacaagtc ctcgcgcggc tattccaccg
      961 aggcggtgac ggacacgatc ctgcgccgca tgcccgacta cgtgcactac atctgcccgc
     1021 agttcacgca cacccacgtg aacttccagc gcgtgccctg cgtggacacg agcaatccct
     1081 tcatcgcgcg cgacattccc gcggccgacg agagcatctg cgtcatccgc ttcgccaatc
     1141 ccaagggcat cgacttcccg tacctcctga acatgatcca caacgcctgg atgtcgcgcg
     1201 cgaacacgat cgtggtgcct ggcggcaaga tggagcttgc gatgcaactc attttcacgc
     1261 cgttcatctg gcggatgatg gagcgccggc agcgtgcccg ggacgtcctt tgaccgcgcg
     1321 ggacccacga tgagctcgag ctccgacgac agggtgatcc gcgccgacaa cggccagcgg
     1381 aacgagatgg cgaacgcgct gcgggcactg gccatggacg ccgtgcagca ggcgaactcc
     1441 ggccatcccg gcgcgccgat ggggatggcg gagatggccg tcgccctatg gcacggccac
     1501 ctgcggcacc atccggcgaa tccggcgtgg gccgaccgcg atcgcttcgt gctgtcgaac
     1561 ggccatgcgt cgatgctgct gtatgcgctg ctgcacctga ccggttacga cctgccggtc
     1621 gccgagctca agcgtttccg gcagcttcac agcaagactc cggggcaccc ggagcgcggg
     1681 ttgacgcccg gcgtcgagac caccaccggc ccgctggggc agggcctcgc caacgcggtc
     1741 ggcttcgccc tggccgagaa gctcctcgcc gacgagttca accgtccggg gcaccggatc
     1801 gtcgatcatc gcagctacgt cttcctgggc gacggctgcc tgatggaagg catcagccac
     1861 gaagcctgcg cgctcgccgg cgtgtggaag ctcggcaagc tgatcgcgct ctacgacgac
     1921 aacggcatct ccatcgacgg tgcggtccag ggctggttca cggacgacac gccggcgcgc
     1981 tttcgcgcct acggctggaa cgtgatcggc ccgctcgatg gccacgacgt gggggcgatc
     2041 gggcaggcga tcgcgcaggc caagacgtcg gtcgaccggc cgacgctgat cgtctgccgt
     2101 accacgatcg gaaagggctc gccggcgcgc gccgggacgg ccagggcgca tggcgagccg
     2161 ctcggcgccg aggaggtggg gcactcgcgc gccgcgatcg ggtggccgca tgcgccgttc
     2221 gagatcccgg tcgacctcgc tgcccggtgg aatgcccgcg aaaccggtgc cgcgcaggaa
     2281 gccgagtggc gcgatcgatt cgccgcctac cgcgacgcgc atcctgaatt ggcgagcgag
     2341 ttcgagcgcc gaatggcggg cgagctgccg cacgacttcg cggagacgct gctcacggtg
     2401 atggccgaat gcgggcagtc gcgcgagtcg tgggccacgc gcaaggcgtc gcagaaggtg
     2461 ctcgcgatgc tggcaccgaa actgccggag ctgctcggcg gcagcgcgga cctgaccggc
     2521 tcgacgctca ccgacttccc cgggtgcggc gccgttcgcg gcggcgcaag gggcgggcgc
     2581 cacgtcaact acggcgtgcg cgagttcggg atggccgcgg tgatgaacgg cgtcgccctc
     2641 cacggcggct tcattcccta cggcggaacg tttctggcct tcagcgacta cagccgcaac
     2701 gcggtgcgga tggccgcgct gatgaagcag cgcgtcatcc atgtcttcac ccacgattcg
     2761 atcggcctcg gcgaggacgg cccgacccat caaccggtcg agcacgcggc gagcctgcgc
     2821 ctcatcccga atctcgatgt ctggcggccg tgcgacgctg ccgagaccgg cgtggcgtgg
     2881 acgcatgccc tggcgcagcg tgatcggccc agcgcgttgc tgttgtcgcg ccagaacctg
     2941 ccggcgcagc aacgaacgcc ggaccaggtg ctcgacatcc ggcgtggcgg ctatgtcctc
     3001 agcgaccgca gcgacgcact tgccgtgatc ctcgcgaccg gctccgaggt atcgctggcg
     3061 atggcggcgc agcgcttgct cgacgcgcgc ggcatcccgg tgcgcgtcgt gtcgctgccg
     3121 tcgtcgacgg tgttcgaccg ccaggagcgg agctaccggg agg
//
LOCUS       DASSYW010000071         3783 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_901008, whole genome shotgun sequence.
ACCESSION   DASSYW010000071 DASSYW010000000
VERSION     DASSYW010000071.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3783)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3783)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3783
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_901008"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..501
                     /locus_tag="VFN38_01150"
     CDS             <1..501
                     /locus_tag="VFN38_01150"
                     /inference="COORDINATES: protein motif:HMM:NF027651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type biogenesis CcmF C-terminal
                     domain-containing protein"
                     /protein_id="HET9010384.1"
                     /translation="CAFAGLAFKTDHDVQLKAGQTKELVDPLGHRWKFVSQGVSTSET
                     LNRFVTAVGLEVWRDGVRQGIVTSEKRQHFDSNKQPQFEPSTEVGIRTSAAMDLYVVL
                     AGVREETAELRISFNPLVVWVWIGGVVMALGGLIVMWPQAERRRAGGYVATLEPARRV
                     ELAGVR"
     gene            501..1121
                     /locus_tag="VFN38_01155"
     CDS             501..1121
                     /locus_tag="VFN38_01155"
                     /inference="COORDINATES: protein motif:HMM:NF015853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type biogenesis protein CcmH"
                     /protein_id="HET9010385.1"
                     /translation="MRRRDFLARVAAGAAVAAVAPRALAQEAAPGGSGAAPVQGTTSN
                     LFDMNQEAAKTVRRPPKPGARASMSADERDALEHDIRCQCGCTLDVYTCRTTDFSCQV
                     SPAMHRDVISLVEGGYSAQEILDAFVGTYGERALMAPRREGFNWAGYLVPFAALGAGA
                     AALVIVLRRMQRRTVVVSAESRAAPVGAPATAEELARLHAAVRRDD"
     gene            1121..1600
                     /locus_tag="VFN38_01160"
     CDS             1121..1600
                     /locus_tag="VFN38_01160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HET9010386.1"
                     /translation="MLALIVGTILAVGALAYVLFPLLAGAMPVPRRFALPAGATDGAP
                     EQEAVVALREIEFDRATGKLSDADYEELKARYTERALHALRATGAATPDELAEAAVVA
                     FRARLKSCARCGPRPEPDATYCSGCGSYLPGACGSCGATVTESGAAFCASCGRQLAA"
     gene            complement(1631..2653)
                     /locus_tag="VFN38_01165"
     CDS             complement(1631..2653)
                     /locus_tag="VFN38_01165"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HET9010387.1"
                     /translation="MQRKSQVIGGLFVLVGIFALVRKNSENTKAAATPAVRQAAPAAA
                     VAAAATTDEEAASLADARRGFVTSVSRRETVPMPLPDPPAALFIRTDVAGKHGLTLPA
                     FITPDPKDGRKHPAIIWLTGGDTNTLDEFWTPGPEANDQSASAFRQAGVVTMFPTLRG
                     GNTNAGGKEYFFGEIDDVLAAAEHLARQSYVDPEQVYLGGHSTGGTLALLTAEASGRF
                     KAVFAFGPVARVDRYPASLVPVNLGEPGGPERRLRSPIHWLTGISSPTYLIEGRNAPG
                     NLADVEELCAKSRNAQVRCILADGVDHFSVLSKVSRVIAARLSVAGEIPFVLQAGEFG
                     SAVARE"
     gene            complement(2705..3256)
                     /locus_tag="VFN38_01170"
     CDS             complement(2705..3256)
                     /locus_tag="VFN38_01170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010388.1"
                     /translation="MHAPRLAPGGFALLLGLAAACADVPDDSNIARGRGLPPATLAPA
                     AEAGVYDAAVRASFDVSPDLVLMLHPRRLPRTAGYDGGDPVPDALVQALRDRGVVRGR
                     CEPKHEAPRDTPRCAGSQAGYVIRASPVMQSGRDTLQLNFAAEAFAAETGARPPALRF
                     EKIYQLVRQGSDWRVVREARVHE"
     gene            complement(3256..>3783)
                     /locus_tag="VFN38_01175"
     CDS             complement(3256..>3783)
                     /locus_tag="VFN38_01175"
                     /inference="COORDINATES: protein motif:HMM:NF028259.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010389.1"
                     /translation="ARFIFPSVSLEGRTLWLLKSSPMPVKDLLWAKFWVGTLPLLILA
                     LGIVGVTNALLQVSDFMFAVSVMTITMMTFALCGMALGFGTLFPQFETENAAQIPTSF
                     GGLVFMIASVGLIAGVVVLEARPVYGYLRSRFYGTPTYPGEMIFGFGMAALLCVAATI
                     IPIGIAKRRLEAVER"
BASE COUNT          534 a         1335 c         1401 g          513 t
ORIGIN      
        1 tgcgccttcg ccggcctggc gttcaagacg gaccacgacg tccagctcaa ggcggggcag
       61 acgaaggagc tggtggatcc gctgggccac cgctggaagt tcgtgagcca gggggtgtcc
      121 acctcggaga ccctcaaccg cttcgtcacc gccgtgggcc tggaggtctg gcgcgacggc
      181 gtgcggcagg gaatcgtcac gagcgagaag cggcagcact tcgacagcaa caagcagccg
      241 cagttcgagc ccagcaccga ggtggggatc cgcacctcgg cggcgatgga cctctacgtg
      301 gtgctggccg gcgtgcgcga ggagacggcg gagctgcgaa tcagcttcaa cccgctcgtc
      361 gtgtgggtgt ggatcggagg cgtggtgatg gcgctgggcg ggctgatcgt gatgtggccg
      421 caggctgagc gtcgtcgcgc cggtgggtac gtggcgacgc tggagccggc gcggcgcgtc
      481 gagctggcgg gggtgcgctg atgcggcgcc gcgacttcct cgcccgcgtc gccgcgggcg
      541 ccgccgtcgc cgccgtggca ccacgcgcgc tcgcgcagga ggccgcgccc ggcgggagcg
      601 gtgccgcgcc cgtgcagggg acgacgtcca acctgttcga catgaaccag gaggcggcga
      661 agacggtgcg ccgcccgccg aagccgggcg cgcgggcgtc gatgtccgcc gacgagcgcg
      721 acgcgctgga gcacgacatc cgctgccagt gcggctgcac gctggacgtg tatacctgcc
      781 gcaccaccga cttctcgtgc caggtgtcgc cggcgatgca ccgcgacgtg atctcgctgg
      841 tggagggcgg ctattcggcg caggagatcc tcgacgcctt cgtggggacg tacggcgagc
      901 gtgcgctgat ggcgcccagg cgggaggggt tcaactgggc gggctatctc gttccgttcg
      961 ccgcgctcgg cgccggggcg gcagcgctgg tgatcgtcct gcgccgcatg cagcggcgca
     1021 ccgtggtggt ctccgccgag tcacgcgccg ctcccgtggg cgcgccggcg accgccgagg
     1081 agctggcgag gctgcacgcc gccgtgcgcc gcgacgactg atgctcgcct tgatcgtcgg
     1141 taccatcctc gccgtgggcg cgctcgccta cgtcctcttc cccctgctcg ccggcgcgat
     1201 gccggtgccg cgtcgtttcg ccctgccggc cggcgcgacg gatggtgcgc ccgagcagga
     1261 ggccgtggtg gcgctgcggg agatcgagtt cgaccgcgcg acgggcaagc tgtcggacgc
     1321 ggattacgag gagctgaagg cgcgctacac cgagcgcgcg ctccatgcgc tgcgcgccac
     1381 cggcgcggcc acccccgacg agctggcgga agcggcggtg gtggcgttcc gggcccggct
     1441 caagagctgc gcgcggtgcg ggccgcgccc cgagcccgac gcgacgtact gctccggctg
     1501 cgggagctat ctgcccggcg cctgcgggag ctgcggcgcg acggtcaccg aatcgggcgc
     1561 ggcgttctgc gcgtcgtgcg ggcggcagct ggcggcgtag ccctgtggcc ggcgcggccc
     1621 gtcgcgccgg ttactcccgc gcgacggccg acccgaactc ccccgcctga aggacgaacg
     1681 gaatctcgcc cgccaccgac agccgcgccg cgatgacgcg ggagaccttc gacagcacgc
     1741 tgaagtggtc gacgccgtcc gcaaggatgc agcgcacctg ggcgttgcgg ctcttcgcgc
     1801 acagctcctc gacgtcggcc aggttcccgg gcgcattccg tccctcgatc aggtacgtgg
     1861 ggctggagat gcccgtcagc caatggatgg gcgaccgcag ccggcgctcc ggtccgcccg
     1921 gttcgccgag attcaccggc accagcgagg cggggtagcg gtccaccctt gccaccgggc
     1981 cgaaggcgaa gacggccttg aagcggccgc tcgcttcggc agtcaggagc gccagggtcc
     2041 cgccggtgct gtggccgccc agatagacct gctccgggtc aacgtagctc tgccgcgcca
     2101 ggtgctcggc cgcggcgagc acgtcgtcga tctccccgaa gaaatactcc ttgccgcccg
     2161 cattggtgtt gccgccgcgc agggtgggaa acatcgtcac gacgcccgcc tggcgaaacg
     2221 cactggccga ctggtcgttc gcctccggcc caggggtcca gaactcgtcg agcgtgttgg
     2281 tgtctcctcc cgtgagccag atgatggccg gatgcttccg gccatccttc ggatccgggg
     2341 tgatgaacgc cgggagggtg aggccgtgct tgccggcgac gtcggtgcgg atgaacaatg
     2401 cggcgggggg atcgggcagc ggcatcggca cggtctcgcg ccgcgagacg ctcgtgacga
     2461 agcctcgccg ggcatcggcc agcgacgccg cttcctcgtc ggtcgtggca gcggccgcga
     2521 cggcagcggc cggcgcggcc tggcgcacag ccggcgtcgc ggccgccttc gtgttctcgc
     2581 tgttcttccg cacgagggcg aagatgccca ccagcacgaa cagccctccg atcacctgcg
     2641 acttgcgctg catcttcctc ccgaaatggc ccggtcgcgc ccgcgggcgt gccctgcgcc
     2701 gcgatcactc gtggacccgc gcctcgcgca cgacgcgcca gtcggagccc tgccgcacga
     2761 gctgatagat cttctcgaac cggagcgccg gcggccgcgc gcccgtctcg gcagcgaacg
     2821 cctcggcggc gaagttgagc tggagggtgt cgcgtcccga ctgcatcacg ggcgacgcgc
     2881 ggatcacgta gcccgcctgc gagccggcgc accgcggggt gtcgcgcggc gcctcgtgct
     2941 tcggctcgca ccggccgcgc acgacgccgc ggtcgcggag cgcctgcacc agcgcgtcgg
     3001 gcacgggatc gccaccgtcg tagcccgccg tgcggggaag ccggcgggga tgcagcatga
     3061 gcacgaggtc gggcgacacg tcgaacgacg cgcgcacggc ggcgtcgtac acgccggctt
     3121 cggcggcggg ggccagcgtc gcggggggca gcccgcgccc gcgcgcgatg ttcgagtcgt
     3181 ccgggacgtc ggcgcaggcg gcggcgaggc cgagcagcag ggcgaagccg cccggggcga
     3241 ggcggggagc gtgcatcagc gctccaccgc ctcgagccgt cgcttggcga tgccgatcgg
     3301 gatgatcgtc gccgccacgc acagcagcgc cgccatcccg aagccgaaga tcatctcgcc
     3361 cggatacgtg ggcgtcccgt agaagcgcga ccgcaggtag ccgtacaccg gccgcgcctc
     3421 caggacgacc acgccggcga tgagcccgac cgacgcgatc atgaacacga gcccgccgaa
     3481 cgacgtcggg atctgcgccg cgttctccgt ctcgaactgc gggaacaggg tcccgaaccc
     3541 gagggccatg ccgcagagcg cgaacgtcat catcgtgatc gtcatcaccg agacggcgaa
     3601 catgaagtcg ctcacctgca gcagcgcgtt cgtcacgccg acgatcccca gggcgagaat
     3661 cagcagcggc agcgtgccca cccagaactt cgcccacagc aagtccttca ccggcatggg
     3721 gctcgacttc aacagccaca gtgtgcgtcc ctcgagcgag acggacggga agatgaatcg
     3781 ggc
//
LOCUS       DASSYW010000072         5041 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_163890, whole genome shotgun sequence.
ACCESSION   DASSYW010000072 DASSYW010000000
VERSION     DASSYW010000072.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 5041)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5041)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5041
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_163890"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..659)
                     /locus_tag="VFN38_01180"
     CDS             complement(<1..659)
                     /locus_tag="VFN38_01180"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HET9010390.1"
                     /translation="MKSTVRRTTLAVDVVVLSPRAEALAVLLMRAPAGARERWTLPWD
                     APQQNEGLEEAAARIAESVLGSAPAFFEQVGAFSEGKRHPGDADISIAIVALVPARDE
                     PPATDSEWFPLESLPPLAPRHRAVVERAAAVARQRVDQSPLAFRLLPPTFTLSDLQSV
                     YELLLGRRLHKASFRRALQSSYLVEPTDEWRSEGRGRPAQLFRFAPKKRRGARRGVRF
                     DL"
     gene            complement(956..2818)
                     /locus_tag="VFN38_01185"
     CDS             complement(956..2818)
                     /locus_tag="VFN38_01185"
                     /inference="COORDINATES: protein motif:HMM:NF013126.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /protein_id="HET9010391.1"
                     /translation="MPASGTTIVSSAGPGSALSSDPAADLRWADSVLATLSLRDKAAQ
                     MVWPWVLGDYTPDDDANFRRIQGLFRDQHLGGLIISVGSPTEIAAKLNALQRSSRLPL
                     LVGADLETGAAFRARGGFFLPNGIDLGGATAFPYAMGIGATRDSSLAYAMGRATALEG
                     RALGIHMAFAPVVDVNNNPKNPVISLRSFGEDPQLVARLGAAEVRGIQENGMLATAKH
                     FPGHGDTEQNSHLELARVDASRARIDSVELVPFRAAVQAGVRGVMTFHGIVPALDTTP
                     IAATLNPRIMTDLLRGDLGFRGLVITDALDMNGVLGKMSMAEVTQRAVLAGADVLLMP
                     TDNVGAIDAVVDGVRTGRFPESRVDASVRKLLVAKHELRLDRQRFVDIQALRAVVGDS
                     ANQAAARTAAERAITLVKDSLNIVPLGRLARTARVVSITIAPKVDLGAGTAFNGELAR
                     AFPALRTLTLSPESLYGAASGAGAGAAVTGGTYVASPQPALFPASVENALRAAQGADV
                     AVVSSYFGASSSTASLAAPDGMAALIDGLQKNGAKVVLATFSNPYIATELPATSTYLI
                     AWGSLPISQRAAARALLGLAPITGQLPITIPAVAGYGAGLRRDVLTAPSAAATP"
     gene            complement(2926..3207)
                     /locus_tag="VFN38_01190"
     CDS             complement(2926..3207)
                     /locus_tag="VFN38_01190"
                     /inference="COORDINATES: protein motif:HMM:NF003817.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxidative damage protection protein"
                     /protein_id="HET9010392.1"
                     /translation="MPATVTCARCTQTRAGFERPPFPGAIGARVVDEICQDCWAKWLK
                     QQTMLINHYGLNVMDPQARSFLTKNMEAFLFKKGGEEGVDTSKQGTIAW"
     gene            complement(3372..4175)
                     /locus_tag="VFN38_01195"
     CDS             complement(3372..4175)
                     /locus_tag="VFN38_01195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid desaturase"
                     /protein_id="HET9010393.1"
                     /translation="MFEFGAWASRWWIPVLFVVVAGHLTNVSVTLFLHRAQTHRGVRL
                     HALAAIPMRLWLWLTTAIVTKEWVACHRKHHAFADREGDPHSPVVEGLREILLKGAFY
                     YRKAVRQPGMLEKYGKGTPNDWLERHLLTPLNWTGVLVMLGIDVYLFGFFVGPLVWGI
                     QMIWIPLWAAGVINGIGHALGYRNFEVKDESRNISPIAIWLGGEELHNNHHADPKSAK
                     FKAKWFEFDIGWIYIRALKLIGLAKIEYARNYGSDAKRRDEHAVESVAA"
     gene            complement(4307..>5041)
                     /locus_tag="VFN38_01200"
     CDS             complement(4307..>5041)
                     /locus_tag="VFN38_01200"
                     /inference="COORDINATES: protein motif:HMM:NF013592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family aminopeptidase"
                     /protein_id="HET9010394.1"
                     /translation="WMDEGFNTYINAFANERRYPGTNSYPFYQTNWKAAVDNRIDSPL
                     MTPPDRIDARALGAIGYRKPGAVLIALRDNVVGKETFDRAFREYINRWAFKHPAPGDF
                     FRTLENVSGQDLGWYWRSFFYSTDLLDLGIDNVTMRQQEGQNYAEVALRRNSSVPFPV
                     KLRLRFADNTTQDVTLPVEIWSRADRYNAMLAVKAPVTGARLWADGSAPDFNSTNDVW
                     GTPPAASTAASTAGGLSGDIGGKPLP"
BASE COUNT          804 a         1707 c         1762 g          768 t
ORIGIN      
        1 agatcgaagc gcacgccgcg ccgcgctccg cgccgcttct tcggcgcgaa gcggaacagc
       61 tgggcgggcc gcccccgccc ctcgctgcgc cactcgtcgg tgggctccac gaggtagctc
      121 gactgaagcg cgcggcggaa gctcgccttg tgcaggcgcc ggcccagcag gagctcgtac
      181 acgctctgga ggtcgctgag cgtgaaggta ggggggagaa ggcgaaaggc gagcggcgac
      241 tggtccaccc gctggcgcgc caccgccgcc gcgcgctcca ccaccgcccg atggcgcggc
      301 gccaggggcg ggagcgactc gagcgggaac cactcgctgt cggtggcggg gggctcgtcg
      361 cgtgccggca cgagcgcgac gatggcgatc gagatgtcgg cgtcccccgg atggcgcttg
      421 ccctcgctga acgccccgac ctgctcgaag aacgccggtg cggacccgag cacgctctcg
      481 gcgatgcggg cggccgcctc ctcgagccct tcgttctgtt gcggcgcgtc ccacgggagg
      541 gtccagcgct cccgggcccc ggccggcgcc cgcatcagga ggaccgcgag cgcttcggcc
      601 cgcggcgaca gcaccacgac gtccacggcg agcgtcgtcc ggcggacagt tgacttcatc
      661 gggacggaag ggcgctcgcg catgtcgcgc gaattagtac cagaaagcca ctaatgtcaa
      721 gggcgcgctg cgaacgtcgc cgaccaaatt agtgacgctg tgctccaaaa gcatcgggac
      781 gacgagaacg ctgatatacg gctttccgga agcgcagtca acggacgatg tggcagtgcg
      841 tgatgccgcc ctgacgcgcg ctgccggaac gtcgtggcga cgatggtgcg cggacgagca
      901 cggggtacgg cgcgcgccgt accccgtgct cgtcatctat cgacagccgc agcgtttacg
      961 gcgtcgccgc cgccgacggg gcggtcagca cgtcacggcg cagccccgcc ccgtatccgg
     1021 cgactgccgg aatggtgatc gggagctggc cggtgatggg cgcgagaccg agcagtgccc
     1081 gcgccgcggc gcgctgcgag atcggcaagc ttccccacgc gatgaggtac gtcgacgtcg
     1141 ccgggagctc ggtggcgatg tacgggttgg agaaggtcgc gaggacgacc ttcgccccgt
     1201 tcttctgcaa cccgtcgatc agcgccgcca ttccgtccgg cgccgcgagg ctcgccgtgg
     1261 acgagctcgc gccgaaatac gacgacacga cggcgacgtc ggcgccctgt gcggcgcgca
     1321 acgcgttctc caccgacgcg ggaaagagcg ccggctgggg gctggcgacg taggtgcccc
     1381 cggtgacggc ggcgcccgcg ccggctcccg acgccgcgcc gtacagcgac tcgggcgaca
     1441 gcgtgagggt gcgcagtgcg gggaatgcgc gcgcgagctc gccgttgaac gccgtgccgg
     1501 cgccgaggtc gaccttcggc gcgatcgtga tgctgacgac gcgcgccgtg cgcgccaggc
     1561 gacccagcgg cacgatgttc agcgaatcct tcacgagggt gatcgcccgt tcggccgccg
     1621 tgcgagccgc ggcctggttg gcgctgtcgc ccacgacggc gcgcagggcc tgaatgtcca
     1681 cgaagcgctg ccggtcgaga cgcagctcgt gcttcgccac gaggagcttc cgcaccgacg
     1741 catcgacccg cgactcgggg aagcggcccg tgcgcacgcc gtccacgacc gcgtcgatcg
     1801 cgccgacgtt gtccgtgggc atcagcagca catcggcgcc cgcgagcacc gctcgctgcg
     1861 tgacctcggc catcgacatc ttgccgagca cgccgttcat gtcgagcgcg tcggtgatca
     1921 cgagcccacg gaagccgaga tcgccgcgca gcagatcggt catgatgcgc gggttcagcg
     1981 tcgccgcgat gggggtggtg tcgagcgccg gcacgatccc gtggaaggtc atcacgccac
     2041 gcacaccggc ctgcacggcg gcgcggaagg ggacgagctc gacgctgtcg atccgcgcac
     2101 gcgaggcgtc gacgcgcgcc agctccagat gcgagttctg ctcggtgtcg ccgtgaccgg
     2161 ggaagtgctt cgccgtggcc agcatcccgt tctcctggat gccccgcacc tcggcggcac
     2221 ccagccgggc gacgagctgc ggatcctcgc cgaacgagcg cagcgagatc accggattct
     2281 tcgggttgtt gttgacgtcc accaccggcg cgaacgccat gtggatgccg agggcgcggc
     2341 cctccagcgc ggtggcgcga cccatcgcgt aggccagcga gctgtcccgg gtggcgccga
     2401 tccccatcgc atacggaaac gcggtggcgc cgccaagatc gatcccgttg ggaaggaaga
     2461 agccgccacg ggcgcggaag gccgctcccg tctcgaggtc cgcgccgacg agcaggggca
     2521 ggcggctgga tcgctgcaac gcgttgagct tcgcggcgat ctccgtcggc gatccgacgg
     2581 agatgatcag gccgccgagg tgctggtcgc ggaagagccc ctggatgcgg cggaagttgg
     2641 catcgtcatc cggggtgtag tcgccgagca cccagggcca gaccatctgc gcggccttgt
     2701 cgcgcagcga cagggtcgcg agcaccgagt cggcccaccg cagatcggcc gcggggtcgg
     2761 aggacagcgc ggatccggga ccggcactgg agacgatggt cgtgccactc gccggcacgg
     2821 gagccggtcc ggcgccgccc ggcgtcatgc acccggcaag ggccaggctc aatatcgccg
     2881 cgcccagcga ccttccacgc cacgcgccaa caaccggtcg gtgcctcacc atgcgatcgt
     2941 cccctgtttc gaggtgtcca ccccttcctc gcctcccttc ttgaacagga aggcttccat
     3001 gttcttggta aggaagcttc gtgcctgcgg gtccatcacg ttgaggccgt aatggttgat
     3061 gagcatggtc tgctgcttga gccacttggc ccagcagtcc tgacagatct catcgacgac
     3121 gcgggcgccg atggccccgg gaaagggcgg gcgctcgaat ccggcgcgtg tctgcgtgca
     3181 gcgggcgcag gtgacggtgg cgggcatggg gcattcctcg tgaggtggat tctgagctgg
     3241 aatctaagca tctcggggag cccgcggacg gtgagtgggg aacggagcaa acggcgaagg
     3301 cacaccgagc ggagctcgat gtgccttcag ccgtacacca ttcatggatc accgttcacc
     3361 gcggacagcg ctcaggcggc gacactctcc accgcgtgct cgtcccggcg cttggcatcg
     3421 gacccgtagt tgcgcgcgta ctcgatcttc gccaggccga tcaacttgag ggcgcggatg
     3481 tagatccagc cgatgtcgaa ctcgaaccac ttcgccttga acttggcgct cttggggtcg
     3541 gcgtggtggt tgttgtggag ctcctcgccg cccagccaga tggcgatggg gctgatgttc
     3601 cggctctcgt ccttcacctc gaagttgcgg tagccgaggg cgtgtccgat gccgttgatg
     3661 accccggcgg cccagagcgg aatccagatc atctggatcc cccacacgag cgggccgacg
     3721 aagaagccga acaggtagac gtcgatgccg agcatcacga gcacccccgt ccagttgagc
     3781 ggggtgagaa ggtgccgctc gagccagtcg ttcggcgtgc ccttcccgta cttctcgagc
     3841 atccccggct ggcgcaccgc cttccgatag tagaacgccc ccttcagcag gatctcacgc
     3901 agcccttcca ccaccgggct gtgcggatct ccctcgcggt cggcgaaggc gtggtgcttc
     3961 cggtggcagg cgacccactc cttggtcacg atggcggtgg tcagccacag ccagaggcgc
     4021 atcgggatcg cggcgagcgc gtggagccga acgccgcggt gcgtctgcgc gcggtgaagg
     4081 aagagcgtga cggacacgtt ggtgagatgt cccgccacga cgacgaagag caccgggatc
     4141 caccacctgc tggcccacgc accgaattcg aacatgactt gctccaatgt gaaaacccga
     4201 ccgctcgtgc gtcgtgcgtc agcggcagac atgcaatcta accgccgcga aatccggcga
     4261 ccattcggaa gactcccgac gggcgccgga cctcgcggcg tgtcactcag ggcaacggtt
     4321 tcccgccgat gtcgccgctc agccctccag cggtggacgc cgccgtgctc gcggcgggcg
     4381 gcgtgcccca cacgtcgttc gtgctgttga aatccggcgc cgatccatcg gcccacaacc
     4441 gggcgccggt cacgggcgcc ttgaccgcga gcatcgcatt gtagcgatcg gcccgcgacc
     4501 agatctccac gggaagggtg acgtcctgcg tcgtattatc ggcgaagcgc aggcgcagct
     4561 tgaccgggaa gggcacggag ctgttccgtc gcagcgcgac ctcggcgtag ttctgtcctt
     4621 cctgctgacg catcgtcacg ttgtcgatgc cgaggtcgag gaggtcggtc gagtagaaga
     4681 acgagcgcca gtaccagcca agatcctgcc ccgacacgtt ctcgagcgtg cggaagaagt
     4741 caccgggtgc cggatgcttg aatgcccagc ggttgatgta ctcgcggaac gcgcggtcga
     4801 aggtctcctt cccgacgacg ttgtcgcgca gcgcgatgag caccgcgccc ggcttccggt
     4861 atccgatcgc ccccagcgcg cgcgcgtcga tccggtcggg cggcgtcatg agcggcgagt
     4921 cgatccgatt gtccaccgcc gccttccagt tggtctggta gaaggggtac gagttggtgc
     4981 ccggatagcg gcgctcgttc gcgaacgcgt tgatgtacgt gttgaagcct tcgtccatcc
     5041 a
//
LOCUS       DASSYW010000073         2159 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1563981, whole genome shotgun sequence.
ACCESSION   DASSYW010000073 DASSYW010000000
VERSION     DASSYW010000073.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2159)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2159)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2159
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1563981"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            44..520
                     /locus_tag="VFN38_01205"
     CDS             44..520
                     /locus_tag="VFN38_01205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HET9010395.1"
                     /translation="MRGYARLAGEDEIGWGIVALLHDMDYERYPSLDDHPFRGCDELT
                     RRGYPEWVTRAILSHASYSGVPRESALEKTLFACDELAGFVTAAALVRPSKSVLDLEA
                     ASVIKKMKDKAFARAVSRDDLRQGAETLGLPLEVHVGNVIQFMRVEADALGLRGSL"
     gene            774..1043
                     /locus_tag="VFN38_01210"
     CDS             774..1043
                     /locus_tag="VFN38_01210"
                     /inference="COORDINATES: protein motif:HMM:NF016836.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BON domain-containing protein"
                     /protein_id="HET9010396.1"
                     /translation="MLAASVSAACGGKSIRPATDDGGLSTRVRTVLLNDPQVAAGGIN
                     VTASNGVVTLSGNVRSAAERDRAVSLARGTAGVTDVRSELAVSQP"
     gene            1066..>2159
                     /locus_tag="VFN38_01215"
     CDS             1066..>2159
                     /locus_tag="VFN38_01215"
                     /inference="COORDINATES: protein motif:HMM:NF018899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="POTRA domain-containing protein"
                     /protein_id="HET9010397.1"
                     /translation="MRGRPGTPLLWLLAAVLISWTLQAAPALAQAQTQARPQPQEPLP
                     PRPDPKSVPKPAQTRIKVTSLKIHGADQLGAGRIKSILGTRSSSWLPWGRKRFFDRAA
                     FDADLGRIEAYYADRGFPDAKVTSFDAKLNDKQDAIRIDITVSEGEPVRVARVALDGF
                     DALPERAMTNLRRELPIQPDSIADRAQITATQSMATRALQDRGYPLALVSTEQSPEAD
                     KQVALTLRATPGAEARYGPVTVAGNVSVGDDVITRTLAFEPGNRFSLATLQLSQRRLY
                     DLGLFQLATVSPQTEQVVDGVVPVNVTVAEAKHRQIKLSAGYGSEEKARGEAQWKHVN
                     FWGGARTATVEGKWSSLDRGVRLGFVQPYL"
BASE COUNT          360 a          753 c          724 g          322 t
ORIGIN      
        1 gggcgagagc ctccgcaagc acgccctggc cgtcgaagcg gcggtgcgcg gctacgcgcg
       61 tctggccggc gaggacgaga tcggctgggg catcgtggcg ctgctccacg acatggacta
      121 cgagcgctac ccctcgctcg acgatcatcc ctttcgcggc tgcgatgagc tgacgcgccg
      181 ggggtatccg gagtgggtga cccgcgccat cctctcgcac gccagctact caggcgtacc
      241 gcgtgaaagc gccctcgaaa agacgctctt cgcgtgcgac gaactggccg gcttcgtcac
      301 tgccgccgcg ctggtccggc cctcgaagag cgtgctcgac ctcgaggctg cgtcggtgat
      361 caagaagatg aaggacaagg ccttcgcgcg cgccgtgtcg cgcgacgatc tgcgccaggg
      421 cgccgagacg cttgggctgc cgctcgaggt ccacgtcggc aacgtcattc aattcatgcg
      481 ggttgaggca gatgcgctgg gccttcgagg ctcgctttga gattagctca gcctttgaaa
      541 gactgccgct gagtttgtaa atacggaaac ggccgtcgga tttcgagagg acacgagacg
      601 ccacagctgt ggcaaatccg cgcccctgca ccgactggcg gacacttagc gtggcacacg
      661 ggttgctcga aggcgggtaa ccccgccaat cgagcgctgg aggcgacatg cagaccatct
      721 cgaccagatc tcctcggacg acccgtagct gggcgcgggt cattgggacg ctcgtgctcg
      781 cggccagcgt atcggcggcc tgcggcggca agtcgattcg cccggccacc gacgacggcg
      841 gcctctcgac ccgcgtccgg acggtactgc tcaacgaccc gcaggtcgcg gccggcggca
      901 tcaacgtcac cgcgtccaac ggcgtggtga cgctgtccgg caacgtacgg tcggccgccg
      961 aacgcgatcg cgccgtgtcg ctggcgaggg ggaccgccgg cgtcaccgac gtaagatcgg
     1021 aactcgcggt aagccagccc tgattcattt ggcaccttgt cgtacatgcg cggccgcccc
     1081 ggcactcccc tcctctggct cctcgccgcc gtcctgatct cctggacgct gcaggcggcg
     1141 cctgccctgg cacaggcgca gacgcaggcg cggccccaac cgcaggagcc gctgccgccg
     1201 cggcccgacc cgaaaagcgt gcccaagccg gcgcagacgc gtatcaaggt cacgagcctg
     1261 aagattcacg gcgccgatca gctcggcgct ggacgcatca agtcgatcct cggcacgcgc
     1321 tccagcagct ggctgccgtg gggacgcaag cgcttcttcg accgcgcggc cttcgacgcc
     1381 gatctcggac gcatcgaggc ctactacgcg gatcgcggct tcccggacgc caaggtcacc
     1441 tccttcgacg cgaagttgaa cgacaagcag gacgcgatca ggatcgacat caccgtcagc
     1501 gagggcgagc ccgtgcgcgt cgcccgcgtc gcgctcgacg ggttcgacgc gctgcccgag
     1561 cgcgccatga cgaacctgcg ccgggagctg ccgatccaac ccgactcgat tgccgatcgg
     1621 gcgcagatca ccgccacgca gagcatggcg acgcgcgccc tccaggatcg gggctatccg
     1681 ctcgcgctcg tctccaccga acaatcgccc gaggcggaca agcaggttgc gttgacgctg
     1741 cgggccacgc cgggagcgga agcgcgctac ggtcccgtca cggtcgccgg caacgtgagc
     1801 gtcggcgacg acgtcatcac gcgcacgctc gcgttcgagc cgggcaatcg cttcagcctc
     1861 gccacccttc aactgagtca gcgccgcctg tacgacctcg gcctgttcca gctcgccacg
     1921 gtgtcgccgc agaccgagca ggtcgtggat ggcgtcgtgc cggtgaacgt caccgtcgcc
     1981 gaagccaagc accggcagat caagctcagc gccggctacg ggtcggagga aaaggcgcgc
     2041 ggcgaagcgc agtggaagca cgtgaacttc tggggcggcg cgcggaccgc gaccgtcgag
     2101 ggcaagtggt cgtcgctcga tcgcggcgtg cggctcgggt tcgtgcagcc gtatctgtt
//
LOCUS       DASSYW010000074         5276 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1674399, whole genome shotgun sequence.
ACCESSION   DASSYW010000074 DASSYW010000000
VERSION     DASSYW010000074.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 5276)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5276)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5276
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1674399"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            218..1390
                     /locus_tag="VFN38_01220"
     CDS             218..1390
                     /locus_tag="VFN38_01220"
                     /EC_number="3.4.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070573 - metallodipeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="membrane dipeptidase"
                     /protein_id="HET9010398.1"
                     /translation="MISRRTLLKRAAGACAALVAVPPVAAAMVNRGRYRLFHESTTEY
                     SARAIALMQRSTVIDMLSPFTLDFPLQAKWTVNPESFTDAQFQKFVDSGISVFHPAIG
                     LGGLDPFQTALLFFAGWNAFIAGNDERLMRVDSAADFARAKRSRKIGVLLGLQNSMHF
                     RRPDDVDFFHGQGQRVSQLTYNGRNLIGNGSTERRDEGLSDFGVAIVERMNKVGMAVD
                     VSHCGDRTTLDAFEVSKRPVLITHSNCRALVPGHPRDKSDEAIRAMAKSGGVMGITGV
                     RMFVRDREPTTIEHALDHFDHVAKLVGPEYLGVGSDIDLDGYDDMPPEANKQLRAGYK
                     GSYGFREKIDIEGIDHPKRMFDLTEGLIRRKYTDAQIEGILGGNFQRVLTEIWTVA"
     gene            1545..3071
                     /locus_tag="VFN38_01225"
     CDS             1545..3071
                     /locus_tag="VFN38_01225"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HET9010399.1"
                     /translation="MIDYHPLVSTASRRRALVAGASLLAAPALGAQQRAPDWAAFDRY
                     VERAARDWHVPGLAIAVVSGDSLVFARGYGVAEVGKPARATEHTRFAIGSTTKAMTTA
                     ALAMLVDEGKLRWDDKVIDHLPELRLYDPYVTRELTVRDLLTHRSGLPNTDLLWAVRE
                     NQYTIPEMMRRLRYVRPTSSFRSTWLYQNVVYAIGGLLVERISGMPWETFVRTRIFTP
                     LGMRESEPLVAGIRGKPDVATPHEEVRDTVRVVPIRSTDAVAPAGSVWSSVSDMSRWM
                     RFMLDSGRVGTERLIKPATFNEIVAPQIRAPSNEYPALELAQPHFFSYALGWFVQDYH
                     GETVWMHTGSIDGMSAIIGLLPERRVGVYVLANLDHAELRHALMYQVFDLYGANPPRD
                     WSADLRALFAARRRARATPPARAAGTRPSLPLERYVGTYTDSTFGSVQVTLADGALRG
                     RYEKADLGTLEHWEHDSFRSKPAEGDDPMTLTFLPDGSGSLSGLRMFGVSFVRARAGR
                     "
     gene            3267..5135
                     /locus_tag="VFN38_01230"
     CDS             3267..5135
                     /locus_tag="VFN38_01230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HET9010400.1"
                     /translation="MLLTTSVRRGLFLLLLALSPVPAAAQLTAAQRADSIAGSFEQLE
                     AMVPMRDGVKLHTVVYVPKVRTGALPILFVRTPYGIAGAGRALGGPYSDLAEQGYAFA
                     FQDIRGRYTSEGQFVMLRPMRDRRDKGAIDESTDAYDTVEWLLKTVPRNNGRVGMLGV
                     SYPGWLTVMAMLDPHPALRAVSPQASPADMFIGDDFHHNGAFRLSYGFEYATTMETNK
                     EMSQFAFDSDDLYDWYLRLGSLAHVNERYLKGKIPSWNDFATHSSYDAFWQRQGVTQY
                     LTRVRVPTLNVAGWWDQEDFYGPLKIYETLERHDVKGLNYLVVGPWSHGGWNGASGQK
                     LGNVDFGSPTARHFRANIQAPWFAYWLKDQGKLALAEATTFETGTNQWMTYGSWPPKR
                     NVQTRRLYTRAGGQLSFTAPTEPAATGFDSYVSDPANPVPYRARPIRPSFTSGSTWSR
                     WLVDDQRFLDGRPDVRSWQTAPLEHDVVVAGQITAKLFASTTGSDADWVVKLIDVYPE
                     RYEADTTMNGHQLMVANDVLRARFRNGVERPQPVVPGRIETYTIDLHSQDYRFRKGHR
                     IMVQVQSSWFPLIDRNPQTFVPNIFAARDEDFRPATQRVYRARRAASHLVVPIKEP"
BASE COUNT          844 a         1865 c         1738 g          829 t
ORIGIN      
        1 aggggatcca cgttgggagt tggccgttgc ccgttgaccg tttggcgttt cacggcgttt
       61 cacggcgttc cacgccgtcg atcgcggtga cacgccgaac ggaagacggc cgacggaaaa
      121 caccaaacgt ggatcccccc agcccgctct cgaaccctgc gagctccgct cttgaaccct
      181 gctcgtcccg tcaatgcctt ctcagccgag ggatccaatg atttcgcgtc gcacccttct
      241 caagcgggcc gccggcgcct gtgcggccct cgtcgccgtt ccgccggtcg ccgcggcgat
      301 ggtgaaccgg ggccgctacc ggctcttcca cgagtccacc accgagtatt cggcgcgggc
      361 catcgcgctg atgcagcgat ccaccgtgat cgacatgctc tcccccttca ccctcgactt
      421 cccccttcag gcgaagtgga ccgtgaaccc ggagagcttc accgacgccc agttccagaa
      481 gttcgtggat tcggggatct cggtgttcca tcccgcgatc gggctgggcg gcctcgatcc
      541 gttccagacc gcgctcctct tcttcgccgg ctggaacgcc ttcatcgccg gcaacgacga
      601 gcgcctgatg cgcgtggaca gcgcggcgga cttcgcccgc gccaagcgct cccgcaagat
      661 cggcgtcctg ctcgggctcc agaactcgat gcacttccgc cgtcccgatg acgtggactt
      721 cttccacggg cagggacagc gggtgtcgca gctcacctac aacgggcgca acctcatcgg
      781 gaacggctcc accgagcggc gcgacgaggg gctgagcgac ttcggcgtcg cgatcgtcga
      841 gcgcatgaac aaggtgggga tggcggtgga cgtgtcgcac tgcggggacc gcaccacgct
      901 cgatgcgttc gaggtgtcga agcggcccgt gctcatcacc cactccaact gccgcgccct
      961 cgtgcccggc cacccgcgcg acaagtcgga cgaggcgata cgcgccatgg cgaaatcggg
     1021 cggcgtgatg ggcatcacgg gcgtgcggat gttcgtgcgc gaccgcgagc cgacgacgat
     1081 cgagcacgcg ctcgaccact tcgaccacgt ggcgaagctg gtggggcccg agtacctcgg
     1141 cgtgggcagc gacatcgacc tggacgggta cgacgacatg cccccggagg cgaacaagca
     1201 gctccgcgcc ggctacaagg ggagctacgg gttccgcgag aagatcgaca tcgaggggat
     1261 cgaccatccg aagcggatgt tcgacctcac cgaggggctc atccgccgca agtacaccga
     1321 cgcgcagatc gaggggatcc tgggcgggaa cttccagcgg gtgctcacgg aaatctggac
     1381 cgtagcttga gcgaccgcag cttgaacggc ggcggcgtcg attgcgggct gccggaatcc
     1441 acgtggggcg tcggccgttc tccgttttcc gttcggcgtt tcacggcggc ttcacggtcg
     1501 tttcagagca ggtccccatc accttcgtca taacggagag attcgtgatc gactaccacc
     1561 ctctcgtctc cacggcatcg cggcgccggg cgctggtcgc cggcgcgtcg ctgctggccg
     1621 cccccgcgct cggggcgcag cagcgcgccc cggactgggc cgccttcgac cgctacgtgg
     1681 agcgcgccgc gcgcgactgg cacgtccccg gtctcgccat cgccgtcgtg agcggcgact
     1741 ccctggtgtt cgccaggggc tacggggtgg ccgaggtggg caagccggcg cgcgccaccg
     1801 agcacacgcg cttcgccatc ggctccacca cgaaagccat gacgacggcc gccctcgcca
     1861 tgctcgtgga cgagggcaag ctgcgctggg acgacaaggt gatcgaccac ctgcccgagc
     1921 tccggctgta cgacccctac gtcacgcgcg agctcaccgt ccgcgacctg ctcacccatc
     1981 gctccggact tcccaacacc gacctgctgt gggcggtgcg ggagaaccag tacaccatcc
     2041 ccgagatgat gcggcgcctg cgctacgtgc ggccgaccag ctcgttccgc tccacctggc
     2101 tgtaccagaa cgtcgtctac gccatcggcg ggctgctcgt cgagcggatc tccgggatgc
     2161 cgtgggagac gttcgtgcgc acccgcatct tcaccccgct cggcatgcgg gagtcggagc
     2221 ccctcgtcgc cggcatcaga ggcaagcccg acgtcgcgac gccccacgag gaagtgcgag
     2281 acaccgtgcg cgtcgtgccc atccggagca cggacgccgt cgcaccggcc ggctcggtgt
     2341 ggtcgagcgt gtccgacatg tcgcgctgga tgcgcttcat gctcgacagc ggccgcgtcg
     2401 gcaccgagcg gctgatcaag ccggccacct tcaacgagat cgtcgcgccg cagatccgcg
     2461 cgcccagcaa cgagtatccc gccctcgagc tcgcgcaacc gcacttcttc agctacgcgc
     2521 tgggatggtt cgtccaggac taccatggcg agacggtgtg gatgcacacc gggagcatcg
     2581 acgggatgag cgccatcatc gggctgctgc ccgagcggcg cgtcggggtg tacgtgctcg
     2641 ccaatctcga ccacgccgag ctgcggcacg cgctcatgta ccaggtgttc gatctgtacg
     2701 gcgccaaccc gccgcgcgac tggagcgcgg acctgcgcgc gctgttcgcc gcgcggcgcc
     2761 gtgcccgcgc caccccgccc gcccgcgccg ccgggacccg cccatcgctg ccgctggagc
     2821 ggtacgtggg cacctacacc gactcgacct tcggctccgt gcaggtgacc ctggccgacg
     2881 gggcgctgcg cggacggtac gagaaggccg acctcgggac gctggagcac tgggagcacg
     2941 attccttccg cagcaagccg gcggagggcg acgatccgat gacgctgacc ttcctgcccg
     3001 acggctcggg atcgctgagc gggctgagga tgttcggggt cagcttcgta cgggcccgag
     3061 ccggacgttg atgctcttta tgcacgacgc tccacgcgac gctggagggt ccacgtgacg
     3121 acgaacggga tccacgtttg gagtgaggcg tggtccgttc tccgttcggc gttccactgc
     3181 gtttccgccg tgacacgccg aacggactac ggagaacggc aaactcccaa cgtggatccc
     3241 ctcacccttt catgaactct cttcccatgt tgctcacgac gtcagtacga cgcggccttt
     3301 tcctccttct gctggccctg tccccggttc cggctgcggc ccagctcact gctgcgcagc
     3361 gcgccgactc catcgccggg tcgttcgagc agctcgaggc gatggtcccc atgcgcgacg
     3421 gggtgaagct gcacacggtg gtctacgtgc cgaaggtgcg caccggtgcc ctgccgatcc
     3481 tcttcgtacg cacgccgtac ggcatcgcgg gggccggccg cgcactcggc ggcccgtact
     3541 cggacctcgc ggagcagggg tacgccttcg ccttccagga catccgcggg cggtacacgt
     3601 cggaggggca gttcgtgatg ctccggccca tgcgtgaccg gcgcgacaag ggggcgatcg
     3661 acgagagcac cgatgcgtac gacaccgtgg agtggctgct gaagaccgtg ccgcgcaaca
     3721 acggtcgcgt cggcatgctg ggcgtctcgt atcccggctg gctcaccgtg atggcgatgc
     3781 tcgacccgca tccggcgctc agggccgtgt cgccgcaggc atcgccggcc gacatgttca
     3841 tcggcgacga cttccatcac aacggcgcgt tccgcctgag ctacggcttc gagtacgcga
     3901 cgacgatgga gacgaacaag gagatgtcgc agttcgcctt cgactccgac gacctctacg
     3961 actggtacct ccggctcggc tcactggccc acgtgaacga gcggtacctg aaggggaaga
     4021 tcccctcgtg gaacgacttc gccacccatt ccagctacga cgcgttctgg cagcgacagg
     4081 gcgtcaccca gtacctcacc cgggtgcggg tgccgacgct gaacgtggcg gggtggtggg
     4141 accaggagga cttctacggt ccgctgaaga tctacgagac gctcgagcgc cacgatgtga
     4201 aggggctgaa ctacctcgtc gtcggcccgt ggagccatgg tggatggaac ggcgcctcgg
     4261 gccagaagct gggcaacgtg gacttcggca gccccacggc gcggcatttc cgcgccaaca
     4321 tccaggcccc ctggttcgcc tactggctga aggaccaggg gaagctggca ctggccgagg
     4381 cgacgacgtt cgagacgggg accaaccagt ggatgaccta cggctcctgg ccgccgaagc
     4441 ggaacgtgca gacgcggcgg ctgtacacgc gtgccggcgg gcagctctcc ttcaccgcgc
     4501 ccacggagcc ggcggcgacc ggcttcgact cctatgtctc cgatccggcg aacccggttc
     4561 cctaccgcgc gcgccccatc cggccctcgt tcaccagcgg ctccacctgg tcgcgctggc
     4621 tggtggacga ccagcgcttt ctcgacgggc ggcccgacgt gcgaagctgg cagaccgcgc
     4681 cgctcgagca cgacgtcgtg gtcgccggcc agatcacggc gaagctgttc gcctccacca
     4741 ccggctccga cgccgactgg gtggtgaagc tgatcgacgt gtatccggaa cggtacgagg
     4801 ccgacacgac gatgaacggg caccagctga tggtggcgaa cgacgtgctg cgcgcgcggt
     4861 tccgcaacgg cgtcgagcgt ccccagcccg tcgtgcccgg caggatcgag acgtacacca
     4921 tcgacctgca cagccaggac taccgcttcc gcaagggaca ccggatcatg gtgcaggtgc
     4981 agagcagctg gttcccgctc atcgaccgca acccgcagac gttcgtcccc aacatcttcg
     5041 ccgcgcgcga cgaggacttc cggccggcca cccagcgggt ctatcgcgcc aggcgggcgg
     5101 catcgcacct ggtcgtgccg atcaaggaac cctgagacga tcggccatca gccggcggcc
     5161 ggcgggcagg tagcgaacga cggggcggac ggcgatgtca tcgccgtccg cccttcgtcc
     5221 gcccggcatc gcgcctactt cagcgagagc gactcgaacg ccgtgttgcc gatcgg
//
LOCUS       DASSYW010000075         2822 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_919343, whole genome shotgun sequence.
ACCESSION   DASSYW010000075 DASSYW010000000
VERSION     DASSYW010000075.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2822)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2822)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2822
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_919343"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..677)
                     /locus_tag="VFN38_01235"
     CDS             complement(<1..677)
                     /locus_tag="VFN38_01235"
                     /inference="COORDINATES: protein motif:HMM:NF024852.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HET9010401.1"
                     /translation="MTAGSSARGRALVTGASRGIGRAIARRFAREGYEVVAVARKRKE
                     LDALRAEIAGEGGRCEVIALDVADAAAVAAALKGIDVDVLVNNAGVGVLKPFVELTPA
                     EWQRMLDVNVNALFHVTRAVLPAMFARQSGHVCTIGSIGGRSVFAGGSCYGATKAFVN
                     SWAENLMLEVRDHGVKVSVVMPGAVATEFNGNEPGEKDAWKLMPEDVADAVAHVVLTP
                     PHVLVHRL"
     gene            complement(674..2080)
                     /locus_tag="VFN38_01240"
     CDS             complement(674..2080)
                     /locus_tag="VFN38_01240"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HET9010402.1"
                     /translation="MSRIFAPALLMTLALSPALAAQEPDWSAASRETLAHLQAMIRLN
                     TVNPPGNELQVARHLEQALKAEGIETHLFEPTPGRGALVARLKGNGSRQPVLIMGHMD
                     VVGVERDKWSVDPFAAEVKDGYLYGRGAIDDKGMLAANLETMLLLKRNVVDKGGVLSR
                     DVIFVANSDEEQSGEWGMGWLIKNHPELIKAEFALNEGGRTRIVGGKRLYVAAQNTEK
                     VPHTVTVTARGPGGHASIPLAGNAILRLGRALAKIGEHREPVQVNPTTRTFFAELGRV
                     WPNAHERRAMADVASTDTRRVQRGARVLARIPVFDAVLRNGISATIVQGGIRGNVIPS
                     EAVAKLNVRTLPGQSIDGVVARLKRVVNDSLVEIAVTGRGEDSPASDFHSPMFTAIQE
                     SVRALDPTMTVVPYLSTGATDSARLRSWGMQAFGLLPFPMNQDDEDRMHGNDERVPLA
                     SLDFGTRMIYGAILRVAR"
     gene            2301..2654
                     /locus_tag="VFN38_01245"
     CDS             2301..2654
                     /locus_tag="VFN38_01245"
                     /inference="COORDINATES: protein motif:HMM:TIGR02436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four helix bundle protein"
                     /protein_id="HET9010403.1"
                     /translation="MHDFRRLDVWHESRALGSDVYRLCAKTARPESRLITAQLRRAAL
                     SIASNIAEGCGKSSRAETIRYLEIAAGSAAETEHHLLVAIETDTLESGNAEELLARIG
                     SIRRMLFALIKRLPT"
BASE COUNT          401 a         1031 c          948 g          442 t
ORIGIN      
        1 agccggtgca ccagcacgtg cgggggggtc agcaccacgt gcgccaccgc gtccgccacg
       61 tcctccggca tcagcttcca ggcgtccttc tcgcccggct cgttgccgtt gaactccgtg
      121 gccaccgcgc ccggcatcac gaccgacacc ttcaccccgt ggtcgcgcac ctcgagcatc
      181 aggttctcgg cccacgagtt cacgaacgcc ttcgtcgcgc cgtagcagct gccgccggcg
      241 aacacgctgc gccccccgat ggagccgatg gtgcagacgt ggccgctctg ccgcgcgaac
      301 atcgccggca gcaccgcgcg cgtcacgtgg aacagcgcgt tcacgttcac gtcgagcatg
      361 cgctgccact ccgcgggcgt gagctccacg aacggcttca gcacgccgac gccggcgttg
      421 ttcaccagca cgtcgacgtc gatccccttc agcgccgccg ccaccgccgc cgcgtcggcg
      481 acgtcgagcg cgatcacctc gcaccgtccc ccctcgccgg cgatctcggc gcgcagcgcg
      541 tcgagctcct tccgcttgcg ggcgacggcg accacctcgt agccctcgcg ggcgaagcgg
      601 cgcgcgatgg cgcggccgat gccgcgcgag gcgccggtga cgagcgccct gccgcgcgcg
      661 ctcgagccgg cggtcaccgc gccacccgca ggatcgcccc gtagatcatc cgcgtgccga
      721 agtcgaggct cgccagcggc acacgctcgt cgttgccgtg catccggtcc tcgtcgtcct
      781 ggttcatcgg gaatggcagc aatccgaatg cctgcatccc ccagctccgc agccgcgcgc
      841 tgtccgtcgc cccggtgctg aggtacggca ccacggtcat cgtcggatcg agcgcgcgca
      901 cgctctcctg gatcgccgtg aacatcggcg agtggaagtc gctcgccggc gagtcctcgc
      961 cgcggccggt cacggcgatc tccacgagcg agtcgttcac cacccgcttc agccgcgcga
     1021 cgacgccgtc gatggactgc cccggcagcg tccgcacgtt gagcttcgcc accgcctcgg
     1081 aggggatgac gttgccgcgg atcccgccct gcacgatggt ggccgagatg ccgttgcgca
     1141 gcacggcgtc gaacacgggg atccgcgcca ggacccgcgc gccgcgctgg acgcgccgcg
     1201 tgtccgtgga cgccacgtcg gccatcgcgc ggcgctcgtg cgcgttcggc cacacccgtc
     1261 ccagctcggc gaagaaggtg cgcgtggtgg ggttcacctg caccggctcc cggtgctcgc
     1321 cgatcttcgc gagcgcgcgg ccgagccgca ggatggcgtt gccggcgagg gggatggagg
     1381 cgtggccgcc cggcccgcgc gcggtgacgg tgacggtgtg cggcaccttc tcggtgttct
     1441 gcgcggcgac gtacagccgc ttccctccga cgatgcgcgt gcgtcccccc tcgttgaggg
     1501 cgaactcggc cttgatcagc tccgggtggt tcttgatcag ccaccccatc ccccactccc
     1561 cgctctgctc ctcgtccgag ttggcgacga agatgacgtc gcgcgagagc acgccaccct
     1621 tgtcgacgac gttccgcttg aggagcagca tcgtctcgag gttcgccgcg agcatcccct
     1681 tgtcgtcgat cgcgccgcgg ccgtagaggt acccgtcctt tacctcggcg gcgaagggat
     1741 ccaccgacca cttgtcgcgc tcgacgccga cgacgtccat gtggcccatg atgagcacgg
     1801 gctgccggct cccgttcccc ttgagccgcg ccaccagcgc gccgcggccg ggcgtgggct
     1861 cgaagaggtg ggtctcgatc ccctcggcct tcagcgcctg ctcgagatgg cgcgccacct
     1921 ggagctcgtt gccgggcggg ttcaccgtgt tcaggcggat catcgcctgg aggtgggcga
     1981 gcgtctcacg actcgcggcg gaccagtcgg gctcctgggc ggcgagtgcg gggctgaggg
     2041 cgagggtcat caggagagct ggggcgaaga tgcgggacat gcgcatgggt ctctggaaga
     2101 ttcgggccct gacggtgcac gaggcgccgc gatgtcgtgg gacttggttc agacggcggg
     2161 ttgaccgcgt ctcgacggcg ggtgccgggt gggtacaagg tacagggtag atggtacctg
     2221 gtacgaggta cgccctgatc ggccacgcgc gacggcgatt tggtgccgca ggtcggcgga
     2281 gcagctcgca ggatgctgtc gtgcatgact ttcgccggct cgatgtctgg cacgaatcgc
     2341 gtgccctcgg ttcggacgtc tatcgactct gtgcgaagac ggcgcggccg gagtcccgcc
     2401 tcatcacggc gcagctgcgc cgtgcggcgc tctccatcgc ctcgaacatc gcggaaggct
     2461 gcggcaagag ctcacgcgcc gagacgatcc gctacctcga gatcgcggcc ggctcggcgg
     2521 cggaaacgga acatcatctg ctcgtcgcga tcgagaccga caccctggag agcggcaatg
     2581 ccgaagagct cctggcccgc atcggctcca tccggcgcat gttgttcgcc ctcatcaaac
     2641 gcctcccaac ctgacgctgg aaacggaagg cgacggaccg gaaactggag actggagact
     2701 agagactaga gactggccgc gacgcacccg actcggcgta ccccgtacca ggtaccctgt
     2761 accttgtacc ctgtaccaac ctgcgtgccg ccctcccacg cccttgcacg ccgtcgccac
     2821 cg
//
LOCUS       DASSYW010000076         4091 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_440167, whole genome shotgun sequence.
ACCESSION   DASSYW010000076 DASSYW010000000
VERSION     DASSYW010000076.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4091)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4091)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4091
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_440167"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..914
                     /locus_tag="VFN38_01250"
     CDS             <1..914
                     /locus_tag="VFN38_01250"
                     /EC_number="1.17.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl
                     diphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0016114 - terpenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HET9010404.1"
                     /translation="INPGNVGGKRRDENFRTIVQIAVDSDKTVRIGVNWGSLDQDLLT
                     QMMDENAAAGSPRTAKDVYMEAMLASALRSAELAEETGLAHDHILISAKVSHVPDLVE
                     VYERLAARCNYPLHLGLTEAGMGMKGQVASAAALSILLAKGIGDTIRVSLTPKPNGDR
                     TEEVLVAQQILQSLGLRSFAPQVTACPGCGRTTSSFFQHMAEDIQTYLREQMLVWKQA
                     HPGVETMHVAVMGCVVNGPGESKHANLGISLPGTFEEPKAPVYVDGKLLTTLKGDHIV
                     QEFLVILEDYVARTYPTPAPALATVAG"
     gene            complement(918..1541)
                     /locus_tag="VFN38_01255"
     CDS             complement(918..1541)
                     /locus_tag="VFN38_01255"
                     /inference="COORDINATES: protein motif:HMM:NF024724.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HET9010405.1"
                     /translation="MTTRGYSDRINHAFAFAAKHHDRQVRKGTRLPYLTHPANVAVIL
                     TRYGQDEQTIVAGILHDVIEDCVRDGYTRDMLEQRIGDKFGPAVLDTVLAVTQRQVDE
                     EGIELSSEERRDDYLARLAGASDSARWVCAADKIHNGASIVADLKRTLDPDTVWSRFS
                     AGRLGTVRWYRRVYDRLRELGFDTPIMVELRDVAEELEQLGASATTR"
     gene            complement(1651..2091)
                     /locus_tag="VFN38_01260"
     CDS             complement(1651..2091)
                     /locus_tag="VFN38_01260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010406.1"
                     /translation="MESSMWADTLLSAERAHLLRLLVWAGGSLLAGTALLAWLQIGRR
                     RSALLEHFALQTAGWGAAELAFGAVARASLAPRDLAGATRLDRLLWLNIGLDGGYVLV
                     GLTLAVIGWTLRRRLGLIGAGLAIVLQGVALMLLDLLLAGQISR"
     gene            2184..2765
                     /locus_tag="VFN38_01265"
     CDS             2184..2765
                     /locus_tag="VFN38_01265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdeI/OmpD-associated family protein"
                     /protein_id="HET9010407.1"
                     /translation="MRTPRFFPTPAAFRAWLDAHHDKRTELIVGFHRKGSGKPSITWP
                     ESVDEALCYGWIDGVRRSLDEHSYTIRFSPRKATSVWSNVNLAKAQALIAAGRMMPAG
                     LAAWERRDPVRSGIYSFEREAAAFDAGMLRLFKADRSAWKHFEAQPPGYRRLATHYVT
                     SAKRPETRAKRLAVLIACSARGERLPGTIPKKR"
     gene            2813..3871
                     /locus_tag="VFN38_01270"
     CDS             2813..3871
                     /locus_tag="VFN38_01270"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF019159.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HET9010408.1"
                     /translation="MPAAHDSLLQVTRHGLFVPAAGLYLDARWAPGTVFVSHAHADHC
                     SQADRIVCTPETAALHSARRGPRDALVIPYDVPTRMGDAELVLHSAAHCLGAAMLEVR
                     TDRGTLVYTGDYKLRPNPFTPPSRIPRCDELVMECTFGEPRYVFPPDDQLVRELHAFV
                     DAAFADDATPVVLAYALGKGQEALHHLTAGGYDVVLHGAIANLCRLHVELGHPFPGPG
                     LWTSYKRGAVGRRVLLTTPSTRKTAMVQGLPKRRICYLTGWAFHPGAHNIYKGIDLVL
                     PLSDHADYEELVRTARESEARRIYTVHGPERFADRLRALGLPAEHLGAHPQDLCDDDE
                     GDPAVAAAMPDQHSLDLR"
     gene            3868..>4091
                     /locus_tag="VFN38_01275"
     CDS             3868..>4091
                     /locus_tag="VFN38_01275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010409.1"
                     /translation="MSATPTDRLDSFARWVAAADRVRGTTKRLEKLAVLVEYLPTLDD
                     GALAVAARFFSGIVFPRHDQRTTRVGGSIL"
BASE COUNT          662 a         1435 c         1388 g          606 t
ORIGIN      
        1 gcatcaaccc gggcaacgtg ggcgggaagc gacgcgacga gaacttccgt accatagtgc
       61 agatcgccgt cgatagcgac aagaccgtcc ggatcggcgt gaactggggc tcgctcgacc
      121 aggatctgct cacgcagatg atggacgaga atgccgccgc cggctcgccc cgcacggcga
      181 aggacgtgta catggaggcg atgctcgcct ccgcccttcg ctcggccgag ctggccgagg
      241 agacggggct tgcccacgat cacatcctga tctccgccaa ggtctcgcac gtgcccgacc
      301 tggtggaggt ctacgagcgg ctcgccgcgc gctgcaacta cccgctgcac ctcggcctga
      361 cggaggcggg gatggggatg aaggggcagg tggccagcgc cgccgccctt tccatcctgc
      421 tcgcgaaggg gatcggcgac accattcgcg tgtcgctcac ccccaagccg aacggcgatc
      481 gaacagagga agtgctggta gcacaacaaa ttctccagtc gctcggcctt cgcagcttcg
      541 ccccacaggt caccgcctgc cccggctgcg gacgcaccac gtcgagcttc ttccagcaca
      601 tggcggagga catccagacc tacctccgcg aacagatgct ggtgtggaag caggcgcatc
      661 cgggcgtgga gacgatgcac gtcgccgtca tggggtgcgt ggtgaacggc ccgggcgagt
      721 cgaagcacgc caatctcggc atctccctgc cggggacgtt cgaggagccg aaggcgccgg
      781 tctacgtgga cggcaagctg ctcaccacgc tcaagggcga ccacatcgtg caggagttcc
      841 tcgtcatcct cgaggactac gtggcacgga cctatccgac ccccgcgccg gcgctcgcca
      901 ccgtcgccgg ctgacggtca tcgcgtcgtc gcgctcgcgc cgagctgctc cagctcttcg
      961 gcgacgtcgc gcaactccac catgatgggc gtgtcgaatc cgagctcgcg cagccgatcg
     1021 tagacgcgcc gataccagcg caccgtgccc aggcgacccg cgctgaagcg cgaccacacg
     1081 gtgtcgggat cgagcgtccg cttgaggtcc gcgacgatgg aggcgccgtt gtggatcttg
     1141 tccgcggcgc acacccaccg cgcactgtcg gaggcgccgg cgaggcgggc caggtagtcg
     1201 tcgcgacgct cctcgctcga cagctcgatc ccctcttcgt cgacctggcg ctgcgtcacc
     1261 gcgagcaccg tatcgagcac cgccgggccg aacttgtcgc cgatccgctg ctccagcatg
     1321 tcgcgtgtgt atccgtcgcg cacgcagtcc tcgatcacgt cgtgcaggat gccggcgacg
     1381 atcgtctgct cgtcctggcc gtagcgcgtg aggatgacgg cgacgttcgc gggatgcgtc
     1441 aggtagggaa ggcgcgtgcc cttccgcacc tgccggtcat ggtgcttcgc cgcgaaggcg
     1501 aaggcgtggt tgatccgatc ggagtagccg cgcgtcgtca tcacacctgg atactgcgga
     1561 gagccggaaa acgctggatc gaaccgtgga agatactgcg ggctcacacg gtccgcacgc
     1621 attgagcatc gacctgaacc cggcatttca tcagcgcgag atctgcccgg ccagcagcag
     1681 atcgagcagc atgagggcga cgccctgcag cacgatggca agacccgccc cgatcagccc
     1741 gaggcgccgc cgcagcgtcc acccgatgac cgccagcgtg agccccacga gcacgtagcc
     1801 gccatccagc ccgatgttga gccagagcag tcgatcgagc cgcgtcgcgc ccgcgagatc
     1861 gcgcggcgcg agcgatgccc gcgcgaccgc gccgaaggcc agctcggcgg ctccccagcc
     1921 ggcggtctgg agcgcgaagt gctcgagcag tgccgatcga cgacgcccga tctgcagcca
     1981 ggcgagcaag gcggtaccgg cgagcaggct gccccccgcc cagacgagca gacggaggag
     2041 gtgtgcgcgc tccgccgaca gcagggtgtc cgcccacatg gaggattcca tggcgcgaac
     2101 gctagcggag ttgccgatgg tcgtgcagta ggcgatgcac cgctctggcc tgccccaacc
     2161 gggcggctct agctttgtcc accatgcgca ccccgcgctt cttccccacg cccgctgcat
     2221 tccgtgcctg gctcgatgcc caccacgaca agcgcaccga gctgatcgtc gggttccacc
     2281 ggaagggctc gggaaagccg agcatcacct ggccggagtc ggtggacgag gcattgtgct
     2341 acggctggat cgacggcgtc cggcgctccc tggacgagca cagctacacg atccgcttct
     2401 cgccccggaa ggcgacgagc gtctggagca acgtcaacct cgcgaaggcg caggcgctca
     2461 tcgcggcggg ccggatgatg cccgccggcc tcgcggcgtg ggaacggcgc gatccggtgc
     2521 gctcggggat ctactcgttc gagcgtgagg cggcagcctt cgacgccggg atgttgcgcc
     2581 tgttcaaggc cgaccgctcc gcctggaagc atttcgaggc acagccgcca ggctatcgca
     2641 ggctggcgac gcactacgtc acgagcgcga agcgcccgga gacgcgcgcg aagcgcctcg
     2701 cggtcctgat cgcctgctcg gcacgtggcg agcggctgcc ggggacgatc ccgaagaagc
     2761 ggtagccggg gcgggggcgc cggtggcgcg gaatgtgtcc tgtgtgggat cgatgcccgc
     2821 cgcacacgat tccctgctgc aggtgacccg acacgggctc ttcgtgccgg cggccggcct
     2881 gtacctggac gcacgctggg cgccgggcac ggtgttcgtg tcccacgcgc acgcggacca
     2941 ttgctcgcag gccgaccgga tcgtctgcac gcccgaaacg gcggcgctgc attcggcgcg
     3001 ccggggaccg cgagatgcgc tggtgatccc gtacgacgta ccgacccgca tgggcgacgc
     3061 cgagctcgtg ctgcactccg cggcgcactg ccttggcgcc gccatgctcg aggtgcgcac
     3121 cgaccgcgga acgctcgtat acacgggcga ctacaagctg cgccccaatc cgttcacgcc
     3181 gcccagccgc atcccgcgct gcgacgagct cgtgatggag tgcaccttcg gcgagccgcg
     3241 ctacgtcttt ccgcccgacg atcagctcgt ccgcgagctg cacgcattcg tggatgccgc
     3301 attcgccgac gatgcgacgc cggtcgtgct cgcgtatgcg ctggggaaag ggcaggaggc
     3361 gctgcatcac ctcacggccg gcggatacga cgtcgtgctg cacggcgcga tcgcgaatct
     3421 ctgccggctg cacgtggaac tgggtcatcc ctttccggga cccgggctgt ggacatcgta
     3481 caagcgcggc gcggtgggcc gccgggtgct gctcacgacg ccctcgaccc ggaagacggc
     3541 gatggtacag gggctaccga agcggcggat ctgctatctc accggctggg ccttccatcc
     3601 gggcgctcac aacatctaca agggcatcga tctcgtgctc cctctgtcgg atcacgcgga
     3661 ctacgaggag ctcgtgcgca cggcgcgcga atcggaagcg cgtcggatct acacggtgca
     3721 cgggcccgag cggttcgccg atcggctgcg tgcgctgggg ctccccgccg agcatctcgg
     3781 tgcacaccct caggatctct gcgacgacga cgagggcgac cccgccgtgg ccgcggcgat
     3841 gcccgaccag cattcgctcg acctgcgatg agcgccacgc cgacggatcg cctcgacagc
     3901 ttcgcgcggt gggtcgccgc agccgaccgc gtacgcggca cgacgaagcg cctggagaag
     3961 ctcgccgtgc tggtggagta cctcccgacg ctcgacgacg gcgcgctggc ggtcgccgcg
     4021 cggttcttct cggggatcgt gttccctcgg cacgaccagc gcacgaccag ggtcggcgga
     4081 tcgatcctct g
//
LOCUS       DASSYW010000077         2219 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_35094, whole genome shotgun sequence.
ACCESSION   DASSYW010000077 DASSYW010000000
VERSION     DASSYW010000077.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2219)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2219)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2219
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_35094"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(38..472)
                     /gene="flgC"
                     /locus_tag="VFN38_01280"
     CDS             complement(38..472)
                     /gene="flgC"
                     /locus_tag="VFN38_01280"
                     /inference="COORDINATES: protein motif:HMM:TIGR01395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009425 - bacterial-type flagellum basal
                     body [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgC"
                     /protein_id="HET9010410.1"
                     /translation="MSSFKAFEIAGSGMSAQSVRLNTTASNLANAESVSGTPEGVYKA
                     RHPIFEAVRAQLATGPHAGEANANAAVRVRGIYESQAPAAQRYEPGNPLADANGYVYA
                     PAVNVVEEMVNMISASRSYQNNVEVMNTSKDLLLATLRLGQG"
     gene            complement(478..891)
                     /gene="flgB"
                     /locus_tag="VFN38_01285"
     CDS             complement(478..891)
                     /gene="flgB"
                     /locus_tag="VFN38_01285"
                     /inference="COORDINATES: protein motif:HMM:TIGR01396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009429 - bacterial-type flagellum basal
                     body, proximal rod [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgB"
                     /protein_id="HET9010411.1"
                     /translation="MANSLDQYLGVHAAALDVRARRTELIANNLANADTPGYKARDID
                     FRQAMARAAGEKPVSGVHLSTTQAGHIGGAASADAATSPDLKYRTPLAPALDGNTVDT
                     QLEQSAFAENAVRYQATLTFLNNKFRGLLTAILGS"
     gene            1189..1872
                     /gene="flgA"
                     /locus_tag="VFN38_01290"
     CDS             1189..1872
                     /gene="flgA"
                     /locus_tag="VFN38_01290"
                     /inference="COORDINATES: protein motif:HMM:TIGR03170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009428 - bacterial-type flagellum basal
                     body, distal rod, P ring [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring formation chaperone
                     FlgA"
                     /protein_id="HET9010412.1"
                     /translation="MLAAAGFTQAQAPAPADAPGVQALAAVRSAAERALRGQIDPQLS
                     GVTLNAAALDARLRLAACPTALETFAQPPRGNQARALVRVSCGASWTLNVPVEIRREL
                     DVLVLRRAVTRGEILGAADVVAQKRQVASLSSPYVGRVADLAGRTTRRPLPEGTPVTA
                     EALSAALLIKRGQTVTLTASTAGFEVRAPGRALADASASQRLRVQNLDSLKVVEGVAE
                     SDGVVRVSP"
BASE COUNT          337 a          729 c          788 g          365 t
ORIGIN      
        1 gatgatgtcc atgtcgagca tgttctaact cccggcctca gccctggccc agccgcaacg
       61 tggccaggag caggtccttc gaggtattca tgacctcgac gttgttctgg tacgagcgcg
      121 aggccgagat catgttgacc atctcctcca ccacgttgac cgcgggggcg tagacgtagc
      181 cgttggcgtc cgcgagcgga ttgccgggtt cgtagcgctg cgcggccggg gcctgcgatt
      241 cgtagatgcc gcgcacgcgc acggcggcgt tggcattggc ctcgcccgcg tgcggtcccg
      301 tggcgagttg cgcgcgcacc gcctcgaaga tcgggtggcg cgccttgtag acgccctcgg
      361 gagtgccgct gacgctttcg gcgttggcga ggttgctggc cgtggtgttg aggcgcacgg
      421 actgcgccga catgccggag cccgcgattt cgaatgcctt gaaggatgac atggctgcta
      481 gctacccaag atggccgtga gcaggccgcg gaacttgttg ttcaggaacg tgagcgtggc
      541 ctggtagcgc acggcgttct cggcgaaggc cgactgctcg agctgcgtgt cgacggtgtt
      601 gccgtcgagc gccggcgcga gcggtgtgcg gtacttgaga tccgggctgg tcgcggcgtc
      661 ggccgaggcc gcaccgccga tgtgaccggc ctgcgtggtg ctgaggtgca cgccgcttac
      721 gggcttctcg cccgcggcgc gggccatggc ctgccggaaa tcgatgtcgc gggccttgta
      781 gccgggcgtg tcggcattcg cgagattgtt cgcgatgagc tcggtgcggc gcgcgcgcac
      841 gtcgagcgcg gcggcatgca ctccgagata ctggtcgaga ctgttggcca tggatcgctc
      901 ctcgcgtcgg cggtccgacg taccaggagc aaagcaagcg acgtgccacg aggcggatcc
      961 gcgcaccgcg gggccgcaat cgcggaaggg tagttcgggg ttgtgacgtg gcgcgcatcg
     1021 cgggggcgga cgattgccgc ccggcggccg cgggcttccg cgcggcaagc cgcacggggt
     1081 gcaatccagg taacggctgc ggcgcgcgat tcttgaggtg tgccaggcgc gtggcacgtc
     1141 gattgctaac taccctgcat gacagtcaaa tcattgtcgg ttttgtgcat gctcgcggcc
     1201 gccggcttca cccaggccca ggcgccagcg cccgccgatg caccgggagt gcaagcgctc
     1261 gccgccgtgc gttccgccgc ggaacgggca ctgcgcgggc agatcgatcc gcagttgagc
     1321 ggcgtcacgc tgaacgccgc ggcgctcgat gcacggctgc ggctcgcggc ctgcccgacc
     1381 gcgctcgaga ccttcgcgca accgccgcgc ggcaaccagg cccgtgccct ggttcgtgtg
     1441 agctgcggcg ccagctggac gctgaacgtg ccggtcgaaa tccgccgcga gctcgacgta
     1501 ctcgtgctca ggcgcgccgt cacgcgcggc gagattctcg gggccgccga cgtcgtcgcc
     1561 cagaaacgcc aggtcgcctc cctgagctcg ccgtatgtgg gccgggtcgc ggacctcgcc
     1621 ggccgaacca cgcggcggcc actgcccgaa ggcactccgg tgaccgcgga agccctctcg
     1681 gccgcactcc ttattaagag gggtcagacg gtcacgctca cggcctccac ggccggcttc
     1741 gaagtccggg cgcccggccg ggcgctggcc gacgcctcgg ccagccagcg actgcgcgtc
     1801 cagaacctcg attccctcaa ggtggtcgag ggggtggccg aaagcgatgg cgtggttcgt
     1861 gtaagccctt gaccgaaatg tgaaatgcat ctcttgaaca gaatccgcgc caaataatcg
     1921 tcgtcctgct aaaggtttct caaaatcagc cgttaccgct cgtagacgat tcaggagtag
     1981 tggcagagat ggcgaacaag atcagtggaa ttgacggacg tccggtgcag gtgggaggcg
     2041 gcgcacccgt ctcgcgcgtg cgcgacacga ccgacggccg ccaggccgag accacgacct
     2101 ccacttcgaa catcgacgtc tcggacaccg cccgcaccct ggccgcgctc gaagagcaga
     2161 tcgccggcat gccggtggtc agcgagaccc gcgtcgaggc cgtgcgccgc gcgctcgac
//
LOCUS       DASSYW010000078         2020 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1472064, whole genome shotgun sequence.
ACCESSION   DASSYW010000078 DASSYW010000000
VERSION     DASSYW010000078.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2020)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2020)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2020
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1472064"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(437..1216)
                     /locus_tag="VFN38_01295"
     CDS             complement(437..1216)
                     /locus_tag="VFN38_01295"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LytTR family DNA-binding domain-containing
                     protein"
                     /protein_id="HET9010413.1"
                     /translation="MRIMIADDERTARARLRRELDAVPNTEIAGEAADGLSAVEQIRK
                     LRPDLAILDVQMPELDGFGVLRALAPDERPAVIFATAYDAYALDAFRVHAVDYVLKPV
                     DGAQLRQAVERARAQIDARTDEVRLRALLDEALASRGGLAARSDPAADRLLINTDGRL
                     VPVRVADIDWIEAAGNYVRLHVNKTVQMSRDTLSGMERRLDPSRFARIHRSAIVNLDR
                     VRELQAWFSGDFVVLLTTGERLRLSRSFRRAFEARFGRRKE"
     gene            complement(1224..>2020)
                     /locus_tag="VFN38_01300"
     CDS             complement(1224..>2020)
                     /locus_tag="VFN38_01300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010414.1"
                     /translation="LLAAVGVIWVHEIANPIINAFVGRELAMESAPALFGLRVFLVYG
                     ATVVFARAHMLTHWAAARSSVVREVNEALQEAERDVCRAQVHQPAVLASLRELEASCD
                     VGADAVDGRAQALASLLRLCLDALDLPEHDVEAELRIADAYCAVFAVDGASAAITDEA
                     TLQAIVPPGTLATAIASLGARLVEHPLVDGGIVGSRLELSVAFRTSGEVSELAALQRT
                     LNGAVPGGAFVRRRMSGTHTRVELSLPLLRSSDITSDSTSDVLLSA"
BASE COUNT          321 a          694 c          713 g          292 t
ORIGIN      
        1 tccagcgaag gggcgactcg accgtcgcca ccgccgctgc ccgcctaccg gtggattgcc
       61 gttccgtcga cgcgctattg actcgatggg gattcgtcat ctgtagggag gggtcgtcgc
      121 caccggtagg aggcacgctg cgtcatgttg cggactcacg ttcgacacca tcatgcagac
      181 ggacgttggt agggtcgggg aagaatgtga cgagtcgcga gaaagggagg acgggtggaa
      241 gggctggcgg gatgacggga gcaggcacac ctcgcagcga cgcaactgca actgctttct
      301 caccgccgag gaacgcagag gtacgcggag gactggaact gccttttcgc cgcggaggac
      361 gccgaggacg cagagctgag cggcgatact ccgcgtacct ccgcgtcctc tgcggtgaag
      421 aaggccctga cgccattcac tcctttctcc ttccaaaccg cgcttcgaag gcacgacgga
      481 aggagcggct gagccgcagg cgctcgccgg tcgtcaacag cacgacgaaa tcgcccgaga
      541 accaggcctg gagctcgcgc acccgatcga gattgacgat ggcgctccga tgaatgcgcg
      601 cgaagcgact cggatcgagg cggcgttcca tcccgctcaa cgtgtcgcgc gacatctgca
      661 cggtcttgtt gacgtgcagg cgcacgtagt tgcccgccgc ctcgatccag tcgatgtcgg
      721 ccacgcgcac cggcaccagc cggccgtcgg tgttgatgag cagccggtcc gccgcggggt
      781 cgctgcgcgc ggcgaggccg ccgcgcgagg cgagcgcctc gtcgagcagg gcgcgcaggc
      841 gcacctcgtc ggtgcgcgcg tcgatctggg cgcgcgcccg ctccaccgcc tggcgcagct
      901 gcgcgccgtc cacgggcttg aggacgtagt ccacggcgtg gacgcgaaag gcgtcgagcg
      961 cgtaggcgtc gtaggccgtg gcgaagatca ccgccggccg ttcgtccggc gcgagggcgc
     1021 gcagcacgcc gaagccgtcg agctccggca tctgcacgtc caggatcgcg agatccgggc
     1081 gcagcttgcg gatctgctct accgcgctca gcccatcggc cgcctcgccg gcgatctcgg
     1141 tgttgggcac cgcgtccagc tcccggcgaa ggcgcgcccg cgccgtccgc tcgtcgtccg
     1201 cgatcatgat tcgcatggtg aagtcacgcg ctgaggagta catcgctcgt cgagtcagag
     1261 gtgatgtccg aagatcgcag cagggggagg ctcagctcga ctcgcgtatg ggtgccgctc
     1321 atgcgtcgtc gcacgaacgc ccccccgggt acggcgccgt tcagggtccg ctggagcgcg
     1381 gccagctcgc tcacctcacc ggacgtacgg aaggcgacgc tgagctcgag ccggctgccg
     1441 acgatgcccc catcgacgag cggatgctcc acgagtcgcg cgccgaggga cgcgatggcg
     1501 gtggcgaggg tgcccggcgg cacgatcgcc tggagcgtgg cttcgtcggt gatcgccgcg
     1561 ctggcgccgt ccaccgcgaa cacggcacag taggcgtcgg cgatccgcag ctccgcttcc
     1621 acgtcgtgct ccggcaggtc gagggcatcg agacagaggc gcagcaggct cgcgagcgcc
     1681 tgcgcgcggc cgtccaccgc gtcggcaccc acgtcgcagc tggcctcgag ctcgcgcagc
     1741 gacgcgagca ccgccggctg gtgcacctgc gcgcggcaga cgtcgcgttc ggcctcctgg
     1801 agcgcctcgt tcacctcgcg cacgacgctc gatcgcgccg ccgcccagtg cgtgagcatg
     1861 tgcgcgcgcg cgaagacgac cgtcgcgccg tagacgagga agacgcgcag cccgaacagc
     1921 gccggtgcgc tttccatcgc gagctcgcga ccgacgaacg cattgatgat cggattcgcg
     1981 atctcgtgga cccagatcac cccgacggcg gccagcaggt
//
LOCUS       DASSYW010000079         2958 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1269567, whole genome shotgun sequence.
ACCESSION   DASSYW010000079 DASSYW010000000
VERSION     DASSYW010000079.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2958)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2958)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2958
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1269567"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1806)
                     /locus_tag="VFN38_01305"
     CDS             complement(<1..1806)
                     /locus_tag="VFN38_01305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010415.1"
                     /translation="MSICSIAFVRHRRRANGLARSCVVAAITLLAAAPAEAQRSPATP
                     DWSAFDSARLGGMRYRMIGPARGGRVTAVTGVNQEPHTFYMGATGGGVWKTVDAGASW
                     HNVSDGSFPTGSIGAMDVADSDPSVVYVGTGSEAIRSNVSIGRGIYKSTDAGRSWRFV
                     GLRDAGQIGAVVVHPANPDVVYAAVVGNPFANSRTRGVYRTRDGGATWRQVLFLSDST
                     GAVDIELQPGSPDVVYASMWRGARRPWTIISGGGEDGIYRSTDGGDSWTKLGGGLPTG
                     VVGKSDLAVSAAAPRRVYALVEAKVGGGLYRSDDAGERWTLVNTTPGLITRPFYYDNV
                     DADPTNADVVYVGTEGFYKSVDGGRSFRTMRTPHGDNHDLWINPRDGRLFIQSNDGGA
                     NVTLDGGATWSSQQNQPTAEIYQVAMDDQYPYRVYGAQQDNSTLILPSLPVGAAGLDD
                     PIQSWRQGPGCETGPIIPHRTNPDTVYGSCKGQFSRMSRRAGQERQFWVGAQSLYGNA
                     NRDLLYRFQRVSPMELSPHDSRTVYYGSQHVHRTRDEGVTWERISPDLTANDPRYRAT
                     ISGEPITIDVTGEEMYATLYAIRESPVTPGVIWTGA"
     gene            complement(1961..2527)
                     /locus_tag="VFN38_01310"
     CDS             complement(1961..2527)
                     /locus_tag="VFN38_01310"
                     /inference="COORDINATES: protein motif:HMM:NF019614.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1697 domain-containing protein"
                     /protein_id="HET9010416.1"
                     /translation="MSASRGAALQRYVAFLRAINVGGHVVKMADLRAIFEALRFANVE
                     TFIASGNVLFGSAERDVAALELKIERRLARALGYDVATFLRTPSELSRLVDELPFTDD
                     VAAGCSLSVAFLKAPPEPAAVERLDQLRSSVDELLVRGRELYWLCRGRTSESKVWRTP
                     LEKVIGMPATLRNATTVRKLAIRTSGVA"
     gene            complement(2524..2883)
                     /locus_tag="VFN38_01315"
     CDS             complement(2524..2883)
                     /locus_tag="VFN38_01315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010417.1"
                     /translation="MSFLVSLLLPVIATVILFRSLPERVARGKMPAELTTASALTMGA
                     LTGAGALVFLGLLGVGILAYRGKMVTPEGIGIHAAAFWAVQFAISAVIGAAVGALTAL
                     ALLPWVRERLGRSVPGA"
BASE COUNT          417 a         1022 c         1091 g          428 t
ORIGIN      
        1 ggcgccggtc cagatcacgc cgggcgtcac gggcgattcg cggatcgcgt agagcgtggc
       61 gtacatctcc tcgcccgtga cgtcgatcgt gatcggctcc ccggagatcg tcgcgcggta
      121 gcgcgggtcg ttcgccgtga gatcggggct gatgcgctcc cacgtgacgc cctcgtcgcg
      181 cgtgcggtgc acgtgctgcg agccgtagta gacggtgcgc gagtcgtgcg gcgacagctc
      241 catgggcgag acgcgctgaa agcgatacag cagatcgcgg ttggcgttgc cgtagagcga
      301 ctgggcaccc acccagaact gccgctcctg tccggcgcgc cggctcatgc ggctgaactg
      361 gcccttgcag ctcccgtaca cggtgtcggg gttggtgcgg tgcgggatga tcgggccggt
      421 ctcgcaccct ggcccctgcc gccagctctg gatcgggtcg tccagcccgg ccgcgcccac
      481 cggcaggctg gggaggatga gggtgctgtt gtcctgctgc gcgccgtaca cccgatacgg
      541 gtactggtcg tccatggcca cctggtagat ctcggccgtc ggctggttct gctgcgagct
      601 ccaggtggct ccgccgtcca gcgtgacgtt cgcgccgccg tcgttcgact ggatgaagag
      661 gcgcccgtcg cgcgggttga tccacaggtc gtggttgtcg ccgtggggcg tgcgcatcgt
      721 gcggaaggag cggcccccgt cgacggactt gtagaagccc tccgtgccga cgtagacgac
      781 gtcggcgttg gtgggatccg cgtccacgtt gtcgtaatag aaggggcgcg tgatgagccc
      841 cggcgtggtg ttgacgagcg tccagcgctc gcccgcatcg tcggagcgat acagcccgcc
      901 gccgaccttg gcctccacca gcgcatagac gcgccgcggc gccgccgccg agacggcgag
      961 gtcgctcttt cccacgacgc cggtgggcag gccgccgccg agcttcgtcc agctgtcgcc
     1021 gccgtcggtg ctgcggtaga tgccgtcctc gccgcctccg ctgatgatcg tccacggacg
     1081 gcgtgcgcca cgccacatcg aggcgtacac gacgtcgggg ctgccgggtt gcagctcgat
     1141 gtccaccgcg cccgtgctgt ccgacaggaa gagcacctgt cgccaggtgg ccccgccgtc
     1201 gcgggtgcga tagacgccgc gcgtgcggct gttggcgaac ggattaccga cgacggcggc
     1261 gtacaccacg tcggggttgg cgggatgcac caccacggcg ccgatctgcc ccgcgtcgcg
     1321 caggccgacg aagcgccagc tgcgccccgc gtccgtcgac ttgtagatcc cccggccgat
     1381 ggagacgttg ctgcggatcg cctccgagcc ggtgcccacg tagacgacgc tcggatcgga
     1441 gtcggcgacg tccatcgcgc cgatggagcc ggtggggaag gagccgtcgg agacgttgtg
     1501 ccaactcgcg ccggcgtcca ccgtcttcca cacgccgccg ccggtggcgc ccatgtagaa
     1561 ggtgtgcggc tcctggttca cccccgtcac cgccgtcacg cggccgccgc gggccgggcc
     1621 gatcatccgg tagcgcatgc cgccgaggcg tgcggaatcg aatgccgacc agtcgggcgt
     1681 cgccggggaa cgctgcgcct cggccggtgc ggcggcgagc agcgtgatgg cggcgacgac
     1741 gcacgatcga gcgagcccgt tggctcggcg acggtgccgg acgaaagcga tcgagcagat
     1801 ggacatcacg ctggtggtga gaggtgaggc acagaggagc ggagcgctcg gtgtgccgtg
     1861 ccgcgttccc ggagatgatc ctcaatatgc cgcctgtccc gccgcttgct cgttccgcgg
     1921 gggggggggg gcgcggcggc gggcgcagga ggggccgagg ctacgccacc cccgacgtcc
     1981 tgatcgccag cttccgcacc gtggtcgcgt tccggagcgt ggccggcatg ccgatcacct
     2041 tctcgagcgg cgtgcgccac accttcgact cactcgttct gccgcggcag agccagtaga
     2101 gctcgcgccc gcgcacgagc agctcgtcca cgctggagcg gagctggtcc agtcgctcca
     2161 cggcggccgg ttcggggggt gccttcagga aggccaccga cagcgagcag cccgcggcga
     2221 cgtcgtccgt gaacggcagc tcgtccacga ggcgcgacag ctccgacggg gtacgcagga
     2281 aggtggcgac gtcgtagccg agcgcgcgcg cgaggcggcg ctcgatcttc agctccagcg
     2341 cggcgacgtc ccgctcggcg ctgccgaaca gcacgttgcc gctggcgatg aaagtctcga
     2401 cgttggcgaa gcgaagggct tcgaagatcg cgcgcaggtc ggccatcttc acgacgtggc
     2461 cgccgacgtt gatcgcgcgg aggaaggcga cgtagcgctg caacgcggcg cccctgctcg
     2521 cgctcacgcc ccgggcaccg accgcccgag ccgttcgcgg acccagggaa ggagcgcgag
     2581 cgcggtgagg gccccgaccg ccgcgccgat cacggcggag atggcgaact gcaccgccca
     2641 gaacgccgcc gcgtggatgc cgatgccctc tggcgtcacc atcttcccgc gatatgccag
     2701 gatgccgacg ccgaggaggc cgaggaagac gagcgcgccc gccccggtga gcgcgcccat
     2761 cgtcaacgcc gacgcggtgg tgagctcggc gggcatcttg ccgcgcgcga cccgctccgg
     2821 gaggctgcgg aagaggatca ccgtcgcgat gacgggcagc aggagggaga cgaggaacga
     2881 cacgcgctac gcccgcgcgc ggatgtcggc ctgcagcgcg gccggaccgg ccccaccgcg
     2941 cttcgcgcgg tgatgctg
//
LOCUS       DASSYW010000080         3715 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1766669, whole genome shotgun sequence.
ACCESSION   DASSYW010000080 DASSYW010000000
VERSION     DASSYW010000080.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3715)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3715)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3715
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1766669"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..607
                     /locus_tag="VFN38_01320"
     CDS             <1..607
                     /locus_tag="VFN38_01320"
                     /inference="COORDINATES: protein motif:HMM:NF014674.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     GatCAB subunit B"
                     /protein_id="HET9010418.1"
                     /translation="DLPPLVLAADWIARIRHELPELPAARRARFVAEYALGAYDVDVL
                     TVDARLSDYYEAVARMHGDAKAAANWVMGEVMAQLKASATDVASFRVRPQDLAGLLNL
                     VRDGVVSHTAAKQIFVAMVATGDPAAQIAARDGLVKVDDDAQLAAWLDEVVAEMPTEA
                     ERFRAGEKKLQGVLIGAVMKKSKGRADPRKLNQLLAARLGS"
     gene            complement(577..1482)
                     /locus_tag="VFN38_01325"
     CDS             complement(577..1482)
                     /locus_tag="VFN38_01325"
                     /inference="COORDINATES: protein motif:HMM:NF013078.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc dependent phospholipase C family protein"
                     /protein_id="HET9010419.1"
                     /translation="MLAAALVLLVLLPATAHAWTPGTHVFLGEAVLRSLVQLPDTIAD
                     LLRAFPYDFLYGSIAADTSMAKKYVPTGRHCHSWTVGLEIHDAAPDEPMRAFGLGYLA
                     HLAADAIAHNHFVPKQLAVTASTSSLGHSYWESRFETHLGPACARQARDLILLDHSRA
                     DGLLDRILSPTIFSTQTNRRIFRGMVHAADSESWQRIFGLMTENSRWDLADAEVGEYI
                     EWSYDSIIDFLVHFDRSSPYRLDPSGDEALRSAKQVRREALRAGGPERVREEAQRRFG
                     LPVTTLGYARSRGMSLYEPSRAASS"
     gene            complement(1517..1921)
                     /locus_tag="VFN38_01330"
     CDS             complement(1517..1921)
                     /locus_tag="VFN38_01330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010420.1"
                     /translation="MRPKRGPRVRESAPGGGTGRDAQYDLLTAALIGAAIGATATLML
                     RRGPSGQRPVAPVLRGARWAGREALAAGAAGAGWAKSRGGELLDRIPTDEIEESVRET
                     VSEARDRIDGFVRSELSDLRRALRRQRKRLGV"
     gene            complement(1860..2513)
                     /locus_tag="VFN38_01335"
     CDS             complement(1860..2513)
                     /locus_tag="VFN38_01335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010421.1"
                     /translation="MTVSLTQAGAWLLVQAGQLPQHADTLLMRQVGNERGWFETATAI
                     ASGLMSVALLVLTVALVPAAWNFRKSYAKVSDLLDRVYGDINPLMRHASAIADNVNYI
                     TTSVRTDVQQVNATIASANQRLQQAVALTEQRLNEFNALLEVVQHEAESMFVATASTV
                     RGVRTGAAALHHEDDVDDAYRASLPTSEELEDGYDDSDATQAGPTRPRVRPRRRDWA"
     gene            2790..>3715
                     /locus_tag="VFN38_01340"
     CDS             2790..>3715
                     /locus_tag="VFN38_01340"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HET9010422.1"
                     /translation="MNALQFVVQGGHKLSGRIRPSGNKNAALPIVAAALLCEEPVHLT
                     NVPRIKDVEHLVELINSVGANATWTSRNALTIHAKSLHAKELDPVLCRKIRASILLAA
                     PLLARCGELELPPPGGDVIGRRRVDTHFLALQQLGASFELEDAFILKAKKLKGADVFL
                     DEPSVTATENALTAAVAAEGTTVLRNAASEPHVQDLAHFLVAMGGSIEGIGTNTITIH
                     GGRPLKGCTHEIGPDHIEVGSFIGLAAATRSEITIEKAGVEHLRSTLMGFERLGVVCK
                     IKGDDLLVPGNQEMKIRSDLGGAVPKLEDQPWP"
BASE COUNT          563 a         1352 c         1278 g          522 t
ORIGIN      
        1 cgacctgcca ccgctcgtcc tcgctgccga ctggatcgcg cgcatacggc acgagctgcc
       61 ggagctgccc gcggcgcggc gcgcgcgctt cgtcgcggag tacgcgctcg gcgcctacga
      121 cgtggacgtg ctcaccgtgg atgcgcgcct ctccgattat tacgaggcgg tggcgcgcat
      181 gcacggcgac gccaaggccg ccgcgaactg ggtgatgggc gaggtgatgg cccagctgaa
      241 ggcgagcgcc acggacgtcg cgagcttccg cgtgcgcccg caggatctcg ccggcctgct
      301 caacctcgtc cgcgacggcg tcgtgagcca caccgcggcg aagcagatct tcgtggccat
      361 ggtggcgacg ggcgatcccg cggcgcagat cgccgcccgc gatgggctcg tgaaggtcga
      421 cgacgatgcg cagctcgccg cctggctgga cgaggtggtg gccgagatgc ccaccgaggc
      481 cgagcgcttc cgggccggcg agaagaagct gcagggcgtg ctgatcggcg ccgtgatgaa
      541 gaagtcgaag gggcgcgccg acccccgcaa gctcaatcag ctgctcgcgg cgcggctcgg
      601 ttcgtagagc gacatcccgc gggaccgcgc atagccgagc gtcgtcacgg gcagcccgaa
      661 gcgacgctgg gcctcctcgc gcacgcgctc cggcccgccg gcgcgcaacg cctcgcggcg
      721 cacctgcttg gcgctgcgca gcgcttcgtc gcccgacggg tcgagccggt agggcgacga
      781 gcggtcgaag tgcaccagga agtcgatgat cgaatcgtag gaccactcga tgtactcgcc
      841 gacctcggcg tcggcgagat cccaccggct gttctccgtc atcagcccga agatgcgctg
      901 ccagctctcg ctgtcggcgg cgtgcaccat gccgcggaag atgcggcggt tcgtctgcgt
      961 gctgaagatc gtcgggctca ggatccggtc gagcagcccg tcggcgcggg agtggtcgag
     1021 caggatgaga tcgcgcgcct ggcgcgcgca cgccggcccg aggtgcgtct cgaaccggct
     1081 ttcccagtag ctgtggccca gcgacgaggt gctcgccgtg acggcgagct gcttgggcac
     1141 gaagtggttg tgcgcgatgg catcggcggc gagatgcgcc aggtagccga ggccgaaggc
     1201 gcgcatcggc tcgtcgggtg cggcgtcgtg gatctccagc cccaccgtcc acgagtgaca
     1261 gtgccggccg gtcggcacgt acttcttggc catgctcgtg tcggcggcga tggacccgta
     1321 gaggaagtcg tacgggaagg cacgcagcag gtcggcgatg gtatcgggga gctgcacgag
     1381 cgagcgcagc accgcctcgc cgaggaagac gtgcgtgccc ggcgtccagg cgtgcgccgt
     1441 cgccggcagg aggaccagca gcaccagcgc ggcggcgagc acgccgccga tccgcgccag
     1501 tgcgatggtg caggtgctag acgccgagcc gcttgcgctg gcgacggagc gcgcggcgca
     1561 ggtcgctgag ctccgagcgg acgaacccgt cgatccggtc gcgcgcttcg ctgaccgtct
     1621 cgcggacgct ctcctcgatc tcgtcggtgg gaatgcgatc gagcagctcg ccgccgcggg
     1681 acttcgccca gccggcaccg gccgcaccag cggcgagcgc ttcacgtccc gcccagcgtg
     1741 cgccgcgcag caccggcgcg accggacgct ggcccgacgg tccgcgccgc agcatgagcg
     1801 tggcggtggc gccgatggcg gcgccgatga gggcggccgt gagcaggtcg tactgggcgt
     1861 cacgcccagt cccgccgccg ggggcggact cgcggacgcg tgggccccgc ttgggtcgca
     1921 tcggaatcgt cgtagccatc ttcgagctcc tctgacgtcg ggagcgacgc gcgatacgcg
     1981 tcgtccacgt cgtcttcatg gtgaagcgcc gcagcccccg tgcgcacccc gcgcaccgtg
     2041 gacgccgtgg cgacgaacat cgactctgcc tcgtgctgta ccacctcgag cagcgcgttg
     2101 aactcgttca accgctgctc cgtgagcgcg acggcctgct gcagccgctg gttggcggat
     2161 gcgatcgtcg cgttcacctg ctgcacgtcg gtgcgcaccg acgtcgtgat gtagttcacg
     2221 ttgtcggcga tcgcgctcgc gtgccgcatc aacgggttga tgtccccgta gacccggtcc
     2281 agcaggtcac tgaccttcgc gtagctcttg cggaagttcc acgcggccgg cacgagcgcc
     2341 accgtgagca cgagcagcgc caccgacatc aggccgctcg cgatcgccgt cgccgtctcg
     2401 aaccacccgc gctcgttccc cacctgtcgc atgaggagcg tgtcggcgtg ctgtggcagc
     2461 tgcccggcct gcaccagcag ccacgcgccc gcctgcgtca acgagaccgt catcggcacc
     2521 ctgcactgaa atgaaagtga gccgctcgcg gacgcaggcc cgcggcgtga gccgccgcag
     2581 ccgcccacgt gcaagggcga ggccagccgt acgacgctcc ggggcatcgt accggccgcg
     2641 acgcgggcat gtcaagcagc cgtgcgcggc gcgaagggtg cagtggcgac cgccgcgcgc
     2701 cttgacgctc gcgcgcaccc cggggatgtt tccggaatcc ttcggcctcc ggcgcttccg
     2761 ccacggcccg tctcattgca cgccgccgca tgaacgcact gcagttcgtc gtccagggag
     2821 gccacaagct ttccggccgc atccgcccct cgggcaacaa gaacgccgcc ctcccgatcg
     2881 tcgccgccgc gctcctctgc gaggagcccg tccacctcac caacgtcccg cgcatcaagg
     2941 acgtcgagca cctcgtcgag ctgatcaact ccgtcggcgc caacgccacg tggacgagcc
     3001 ggaacgcgct caccatccac gccaagtcgc tccacgcgaa ggagctggat ccggtcctct
     3061 gccggaagat ccgcgcatcc atcctgctcg ccgccccgct gctcgcccgc tgcggcgagc
     3121 tggagctccc gccaccgggc ggcgacgtca tcggccgccg tcgcgtcgac acccacttcc
     3181 tcgccctcca gcagctgggc gcctccttcg agctcgagga tgcgttcatc ctcaaggcga
     3241 agaagctcaa gggcgccgac gtcttcctcg acgagcccag cgtcacggcc accgagaacg
     3301 ccctcacggc ggccgtcgcg gccgagggaa ccacggtgct ccgcaacgcc gcgagcgagc
     3361 cgcacgtcca ggacctggcg cacttcctcg tcgccatggg cggcagcatc gaagggatcg
     3421 gcaccaacac gatcaccatt cacggcggcc gcccgctcaa gggctgcacc cacgagatcg
     3481 gaccggacca catcgaagtc gggtcgttca tcggcctcgc cgccgccacg cgctccgaga
     3541 tcacgatcga gaaggccggc gtcgagcacc tccgctccac cctcatgggc ttcgagcggc
     3601 tcggcgtcgt ctgcaagatc aagggagacg acctcctcgt ccccggcaat caggagatga
     3661 agatccgcag cgacctcggc ggcgcggtgc cgaagctgga agaccagccg tggcc
//
LOCUS       DASSYW010000081         2205 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_255980, whole genome shotgun sequence.
ACCESSION   DASSYW010000081 DASSYW010000000
VERSION     DASSYW010000081.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2205)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2205)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2205
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_255980"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..823)
                     /locus_tag="VFN38_01345"
     CDS             complement(<1..823)
                     /locus_tag="VFN38_01345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010423.1"
                     /translation="MTRAAPVAACAALAALSLLLPWALAFDPQVWIAWGHDAFHGHLD
                     TRGGPTWKPLSVLATTLLAPLDREAEPVWAAIGRMGAQLALWAAYALGERLAGRFAGI
                     VAAVVMALSPWWLLNGALANSEGWLAAAVLAAVLAHLAGRRRAALALGVAAGLLRPEV
                     WPFLGLYGLWLWREGDRLAPALGFAVVAVGWLLPDALGTDGLFAASSTARKPASPGSA
                     QLASVPFLAVLWDAVDQLGIAAVPLAVAALVPWRRADPVLRALALGGAAYVLVVAV"
     gene            complement(820..>2205)
                     /locus_tag="VFN38_01350"
     CDS             complement(820..>2205)
                     /locus_tag="VFN38_01350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010424.1"
                     /translation="LERAVAVGVPDTQGEQADCRGAQVIFAVTSADHGTTRRNPLPAH
                     RREAQIERYAALSGMDCLVFPIADVPPTERFAEYLLAAIAVQEGPELTPANAIVACST
                     PEVIALFEALGFRILPVELGTEEARPWDVLEALVAGEPTRALHPASAQLWDRYGLLSQ
                     VRRAHADPLLTDEGELTETRDYNTYARAFDTGAARKWEQLRAVTRPGRIVDVGCGVGS
                     LLAEIAADAAFAESDLYGIEAARPLFDECVHRRTQGAFANPNTFFFQRTIGQGPLFAP
                     ASVDTTLTVALCHELYSYLGEDTLRGFMAGVREHTVPGGVWIDLDVCGPEDGERVIWM
                     ELHDERSSWERFVADWRPERIEHELREERFVETRLRWAMEWLSKKDYTDNWESEMHES
                     FCFWGYSDWDRAAREAGFEIAPGSHGFTNPWLVGHRFAPVATLREAGERERALPWPDT
                     HLRLVARRPAA"
BASE COUNT          306 a          849 c          812 g          238 t
ORIGIN      
        1 agaccgccac gaccagcacg taggcggcgc cgccgagcgc gagcgcgcgt agcaccgggt
       61 ccgcgcggcg ccacggcacg agcgcggcca cggccagcgg cacggcggcg atcccgagct
      121 ggtcgacggc gtcccacagc acggccagga acggcacgga cgccagctgc gcagagcccg
      181 gcgaggcggg cttgcgcgcg gtcgagctgg cggcgaacag cccgtccgtg ccgagcgcgt
      241 ccggcagcag ccagccgacc gccaccaccg cgaacccgag cgccggggcg aggcggtcgc
      301 cctcgcgcca cagccacagc ccgtagagcc cgaggaacgg ccacacctcg ggccgcagca
      361 gcccggcggc gacgccgagc gcgagcgcgg cgcggcggcg gccggcgagg tgggcgagca
      421 cggccgccag caccgcggcc gccagccagc cctccgagtt ggcgagcgcg ccgttgagca
      481 gccaccacgg gctcaacgcc atcaccacgg cggcgacgat cccggcgaag cgccccgcca
      541 gccgctcccc cagcgcgtag gcggcccaca gcgccagctg cgcgcccatc cgcccgatcg
      601 ccgcccacac gggctccgcc tcgcggtcca gcggcgccag cagcgtggtg gcgagcacgc
      661 tcagcggctt ccatgtcggc ccgccgcggg tgtccaggtg cccgtggaag gcgtcgtggc
      721 cccatgcgat ccagacctgc gggtcgaagg cgagcgccca cggcagcagc agcgacagcg
      781 cggccagcgc ggcgcacgcc gcgaccggcg ctgcgcgcgt cacgccgccg gccgccgggc
      841 gacgagccgc aggtgggtgt ccggccacgg cagcgcccgc tcgcgctcgc ccgcttcgcg
      901 cagcgtggcg accggcgcga agcggtgccc gaccagccac gggttggtga agccgtgcga
      961 gccgggcgcg atctcgaagc cggcctcgcg cgccgcgcgg tcccagtcgg agtagcccca
     1021 gaagcagaag gactcgtgca tctcggactc ccagttgtcc gtgtagtcct tcttggagag
     1081 ccactccatc gcccagcgca gcctcgtctc gacgaagcgc tcctcgcgca gctcgtgctc
     1141 gatccgctcg gggcgccagt cggcgacgaa gcgctcccag ctggagcgct cgtcgtgcag
     1201 ctccatccag atcacacgct cgccgtcctc gggcccgcaa acgtcgaggt cgatccagac
     1261 gccgcccggc accgtgtgct cgcgcacgcc ggccatgaag ccccgcagcg tgtcctcgcc
     1321 caggtaggag tacagctcgt ggcagagcgc gacggtgagc gtcgtgtcga cgctggcggg
     1381 ggcgaacagc gggccctgcc cgatcgtgcg ctggaagaag aacgtgttcg ggttcgcgaa
     1441 cgcgccctgg gtgcggcggt gcacgcactc gtcgaacagc gggcgggcgg cctcgatgcc
     1501 gtagaggtcg gactcggcga acgcggcgtc ggcggcgatc tctgccagca gcgagccgac
     1561 gccgcagccg acgtcgacga tccgcccggg cctggtcacg gcgcgcagct gctcccactt
     1621 gcgcgcggcg ccggtgtcga aggcgcgcgc gtaggtgttg tagtcgcgcg tctcggtcag
     1681 ctcgccctcg tcggtgagca gcgggtcggc gtgcgcgcgg cgcacctgag agagcagccc
     1741 gtagcgatcc cacagctgcg cgctggccgg gtgcagcgca cgcgtcggct cgcccgcgac
     1801 gagcgcctcg agcacgtccc agggccgcgc ctcctcggtg cccagctcga ccggcaggat
     1861 ccggaagccg agcgcctcga acagcgcgat cacctcgggc gtggagcacg cgacgatcgc
     1921 gttcgccggc gtcagctccg gcccttcctg caccgcgatc gcggccagca ggtactccgc
     1981 gaagcgctcg gtcggcggca cgtccgcgat cgggaagacg aggcagtcca tccccgacag
     2041 cgcggcgtag cgctcgatct gcgcctcgcg ccggtgggcc gggagcgggt tgcgccgcgt
     2101 cgtcccgtgg tcggcggagg tgacggcgaa gatcacctgc gcgccgcggc agtcggcctg
     2161 ctcgccctgc gtgtcgggga cgccgaccgc caccgcccgc tcgag
//
LOCUS       DASSYW010000082         2379 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_127157, whole genome shotgun sequence.
ACCESSION   DASSYW010000082 DASSYW010000000
VERSION     DASSYW010000082.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2379)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2379)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2379
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_127157"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(185..877)
                     /locus_tag="VFN38_01355"
     CDS             complement(185..877)
                     /locus_tag="VFN38_01355"
                     /inference="COORDINATES: protein motif:HMM:TIGR00036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008839 - 4-hydroxy-tetrahydrodipicolinate
                     reductase [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate reductase C-terminal
                     domain-containing protein"
                     /protein_id="HET9010425.1"
                     /translation="MTTAPPLRLLVVGYGRMGRLVEALAGEHAMEVAGRVDIDNADQP
                     ESWPDADVAIDFSTASAVVENARRLAARGTDLVIGTTGWQEHETALKQAVAAYPVGVI
                     AAPNFALGVNIFLAIAARAAELMAQRSEFGAWIHEAHHRAKLDAPSGTALAIKDAMVT
                     AGYGAAIDMASTRVGSIPGTHTVGFDSAADTITLTHTTRDRSVFARGALAAARWVHGR
                     RGWFTMKDVLGL"
     gene            complement(874..2238)
                     /locus_tag="VFN38_01360"
                     /pseudo
     CDS             complement(874..2238)
                     /locus_tag="VFN38_01360"
                     /inference="COORDINATES: protein motif:HMM:TIGR00657.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004072 - aspartate kinase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
BASE COUNT          348 a          873 c          822 g          336 t
ORIGIN      
        1 gtcgatctgg cggcgcgcca gccgcctgac cgcggcctcg tcgacggcgc catcgcgcgt
       61 gaacggcgtc accagcgcgg ttccgcaccc ggtccaggga gttcgcattt cagaacctcc
      121 atcggcccgg cgacgccgga ccgtgcaatc cgccaccctc catcgatccg gcgaccgccg
      181 gacgctacaa ccccagcacg tccttcatgg tgaaccagcc gcggcggccg tgcacccacc
      241 gcgccgccgc gagcgcgccg cgcgcgaaga ccgagcgatc gcgcgtcgtg tgcgtgagcg
      301 ttatggtatc cgcagcgctg tcgaatccca cagtgtgcgt gccgggaatc gatccgacgc
      361 gcgtcgacgc catgtcgatc gccgcgccgt agccggccgt gaccatcgcg tccttgatcg
      421 cgagcgcggt gcccgacggg gcgtcgagct tggcgcgatg gtgcgcctcg tgaatccagg
      481 cgccgaactc ggagcgctgc gccatcagct ccgccgcgcg cgcggcgatt gccaggaaga
      541 tgttgacccc gagcgcgaag ttcggcgccg caatcacgcc gaccgggtac gcggcaacgg
      601 cctgcttcag cgccgtctcg tgctcctgcc atccggtcgt gccgatgacg aggtcggtgc
      661 cgcgcgccgc gaggcgccgc gcgttctcga cgacggcgga cgcggtcgag aaatcgatgg
      721 caacgtcggc gtccggccag ctctccggct gatcggcgtt gtcgatgtcg acccgccccg
      781 ccacctccat cgcgtgctcg ccggcgagcg cctcgaccag gcggcccata cggccgtagc
      841 cgacgaccag cagccgcagc ggcggcgccg tcgtcacctc gccgcctcca cctcgcggcc
      901 gtgcagcggc tcggcgaacc aggcgtcgtg caggcgcgcc atcgccgcgg cgacgtcggc
      961 gtcgcgaatc accacggtga cgttccgccg cgatgcggct tgcgagacca tccggagagg
     1021 gatgccgtcc agcccggcga gcatgcggat ggcaaacgcc gggtcggcgc gaagattctc
     1081 gccgacggcg cacaaaagcg ccatgtccgg cgcgaccgtg acttcggcga actcgcgcag
     1141 cgccgcgaca atctcgggca gccggcggct gtcgtcgatc gtcaccgaca cgctcacttc
     1201 cgacgtcgtc acgacgtcga cggcggtgcg atagcgctcg aacacctcga acagacggcg
     1261 caggaagccg tgcgccatca gcatccgtgt cgacgtcact tcgacgacgg tgatgtttcg
     1321 cttgcaggcg agggcggcga tcgggcggcc gttgatcggc ggctgcgcgg tgatcagcgt
     1381 ccctgcggct tcgcggcggt ggctgttgag gatgcggacc gggatggcgg cggacacggc
     1441 ggggaggatc gtgctcgggt ggaggacctt ggcgccgaaa tacgcgagct ccgacgcctc
     1501 gccgaacgag agatgcgaga cgacgcgcgg cgactcgacg acgcgcgggt cggcggtgag
     1561 catgccgtcg acgtcggtcc agatctgaat ctcggatgcg ccgatcccct cgccgatgat
     1621 tgccgccgag taatcggacc cgccgcgccc cagggtggtc gccacgccgt ctgcggtcgc
     1681 accgacgtag ccgccgacaa cgacgacgcg gccggcggca aggtgcggga cgacctcgcg
     1741 ctgcagcgcc tcgtgagtgg gcgcggtcaa cggcgccgcg gcggtgtact gatcgtcggt
     1801 gacgatcgcg cgccgcgcat cgacccacgc ggcgtcgatt ccgaccgacg ccagggcggc
     1861 agcaacgacg cggctgctca gcagctcgcc ggcggacgcg accccgtcca tcgatcgcgg
     1921 cgaggcctcg cgcaggatcg acaacgccgt cagcattgcg cgcagctcgt caatctgcgc
     1981 gacgatctcg tggcgcgctg catcgcggcg cgccggcgcg acgagcgcgt cgacggcggc
     2041 gaggtggcgg cgctgtacct cgtcgacgcc cggaccgatc gcctgccgtt cgccgcgcgc
     2101 ggcgtccgcc gccatgcgca gcagctgatc cgtgaccttc gacatcgccg agacgacgac
     2161 gaccggcggc cccgtccgcg ccgcctcgtc gcggacgatc tcgatcagac ggtccatcgc
     2221 ctccgcgtcg gccacggacg tcccgccgac ctacatcacc acattgagca ctgtcttcct
     2281 cttctttggt tgcgctgggg ccccccccag cgcctgccag cgctcgctct cgctcgcgcc
     2341 ggcgtgtaga agcaaccgcc caattggaga ggattttgt
//
LOCUS       DASSYW010000083         2205 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_624327, whole genome shotgun sequence.
ACCESSION   DASSYW010000083 DASSYW010000000
VERSION     DASSYW010000083.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2205)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2205)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2205
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_624327"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(188..1693)
                     /locus_tag="VFN38_01365"
     CDS             complement(188..1693)
                     /locus_tag="VFN38_01365"
                     /inference="COORDINATES: protein motif:HMM:NF012686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010426.1"
                     /translation="MSGLLLQSAIPGLASPGIVAIALTYFCVVAIIAVWATRRTRNAS
                     DFFVAGAGVGLWTLAIAKMAATLSGFAFIGGPGLVYTIGIGAVFIILPGALSNALGAW
                     VLAKRMRLLGEARGLFTVPDAIGARYRSRLAQGLAAAAVLVAVTGYIATNLLALGLVI
                     DAIFGTGLVAGIWIGTAVILTYSVAGGILAGIYTDVFQGTVMALASAVVFAFALRSGG
                     GMSHLSRTVMAADATFLGPWGSIGPTAAISFFFVFGVGSLGQPHVVHKFYMLRDPRQL
                     KWYPLLMTVALAVTQLLYVSVGIAMKGLVVSGATAPLVRADQATPQFLLHYTPTLVAG
                     LVFSGVAAAIMATVNSFMSVGAAALTHDLPIACGGRVADELKWGRVSTLVLAVIAAAV
                     AQGSGTLVAFLGIFGWGLFGSTIVPALAIGLNWDGATREGAIASIATGLGLTLTGETL
                     GYFRVYSLPAGVSVSALALVSSLLVFFTVSWLTRTRAAAAIDPDISIVMSA"
     gene            complement(1690..>2205)
                     /locus_tag="VFN38_01370"
     CDS             complement(1690..>2205)
                     /locus_tag="VFN38_01370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010427.1"
                     /translation="SGEAGAERHHGPPERGARPMKRSLVRLLVLSCCLVAVGYAAVFF
                     AATIPTWAPVALAVGANGVIMTLMAIGAVRHDTMPRALVWTFIGLFVLCAGAFVAALL
                     LPAREGVGGPLLLGLPLRTAIVLYAVGVVPIAVLPFAYALTFESSTLSEADLARVRAA
                     NDSMRAAREAA"
BASE COUNT          407 a          786 c          754 g          258 t
ORIGIN      
        1 gagcgatgac ctggacggcg cgagtcatga tggtccgaag catgtgcgat ctcctgatag
       61 gtggtgcggc gacggcggcg agagggaggg agcgccgcga gcggaggcag ggcgtgtgga
      121 cgggcgcgcg agcctgcgga cggcgaaggg cgtggtgcgg actatccgct ctcctcatgc
      181 tggcgcatca ggcgctcatc acgatcgaga tgtccggatc gatcgccgcg gcggcgcgtg
      241 tgcgcgtgag ccaggacacg gtgaagaaca cgagcagcga tgagacgagg gcgagcgccg
      301 acacggagac gcccgccggc aggctgtaga ctctgaagta gccgagcgtc tcgccggtga
      361 gcgtgaggcc gagccccgtg gcgatcgagg cgatggcgcc ctcgcgcgtc gcgccgtccc
      421 agttcagtcc gatcgccagc gcgggaacga tcgtcgatcc gaacaggccc cacccgaaga
      481 tcccgaggaa tgcgacgagc gttccggagc cctgcgccac ggcggcggcg atgacggcga
      541 gcaccagcgt gctcacccgt ccccacttca actcgtccgc gactcgcccg ccgcacgcga
      601 tcggcaggtc gtgcgtcagc gccgccgcac ccacgctcat gaacgagttc accgtcgcca
      661 tgatcgcggc ggccacgccc gagaagacga gccccgccac gagcgtcggc gtgtagtgca
      721 gcaggaactg cggcgtcgcc tggtccgccc tgacgagtgg cgccgtcgcg ccactcacga
      781 cgagaccctt catcgcgatc cccacgctca cgtagaggag ctgcgtcacc gcgagcgcga
      841 ccgtcatcag cagcggatac cacttgagct gccgcggatc gcggagcatg tagaacttgt
      901 gcaccacgtg cggctgcccc agcgacccca cgccgaacac gaagaagaac gagatcgccg
      961 ccgtcggccc gatgcttccc cacggcccga ggaacgtcgc gtcggccgcc atcaccgtgc
     1021 gcgacagatg ggacatgccg ccgccggacc gcagcgcgaa cgcgaacacc accgccgacg
     1081 cgagggccat caccgtgccc tggaagacgt cggtgtagat gccggcgagg attcctccgg
     1141 caaccgagta ggtcaggatc accgccgtgc cgatccagat gccggccacg agccccgtgc
     1201 cgaagatcgc gtcgatcacg agacccagcg cgaggagatt cgtcgcgatg tagccggtga
     1261 ccgcgaccag caccgccgcg gcggcgagtc cttgcgcaag gcgcgagcga tagcgcgcac
     1321 cgatcgcgtc cggcacggtg aacagcccgc gcgcctcgcc cagcagccgc atgcgcttcg
     1381 ccagcaccca ggcaccgagc gcgttgctca gcgcaccggg caggatgatg aacacggcac
     1441 cgatgccgat cgtgtacacg agcccgggac cgccgatgaa ggcgaagccg gacagcgtcg
     1501 ccgccatctt cgcgatcgcg agggtccaga gtccgacgcc cgcccccgcg acgaagaagt
     1561 cgctcgcgtt gcgtgtgcgc cgcgtggccc agacggcgat gatcgcgacc acgcagaagt
     1621 acgtcagcgc aatcgccacg atacccggcg acgcgagccc cgggatggca ctctgcagca
     1681 ggagcccgct cacgcggcct cccgtgcggc acgcatcgaa tcgttcgccg cgcgaacgcg
     1741 cgccaggtcg gcctcactca gcgtcgacga ctcgaacgtg agcgcgtacg cgaagggcag
     1801 caccgcgatc gggaccacac cgaccgcgta cagcacgatc gccgtccgga ggggcaggcc
     1861 gaggaggagc ggcccgccca ccccttcgcg cgcgggcagc agtagggccg cgacgaacgc
     1921 ccccgcgcac aggacgaaca atccgatgaa cgtccacacg agagcacgcg gcatcgtgtc
     1981 gtgtcgcacg gcgccgatcg ccatgagtgt catgatcacg ccgttcgccc cgacggcgag
     2041 tgcgacgggc gcccacgtcg ggatggtcgc agcgaagaag acggcggcat atcccaccgc
     2101 tacgagacag cacgagagca cgagcagccg tacgagcgag cgcttcatcg gcctggctcc
     2161 ccgctcgggc ggcccgtggt gcctctcggc accagcttca ccgga
//
LOCUS       DASSYW010000084         2680 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1490251, whole genome shotgun sequence.
ACCESSION   DASSYW010000084 DASSYW010000000
VERSION     DASSYW010000084.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2680)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2680)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2680
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1490251"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1035)
                     /locus_tag="VFN38_01375"
     CDS             complement(<1..1035)
                     /locus_tag="VFN38_01375"
                     /inference="COORDINATES: protein motif:HMM:NF023431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3500 domain-containing protein"
                     /protein_id="HET9010428.1"
                     /translation="MRVIFRAPALLVVAGVFAATLSSVGQSKPQTPGAKPASSADTTG
                     RIVAAAQALVATLDDTGKGKVQFPFDGPQKTRWSNLPTGIFERQGLRLGDLTPAQRAA
                     AMSLLSAALSADGYRKVVDIMRGDDVLRTNAAGGGRGPGGVVFGEGEYYLAFVGTPST
                     KTPWMLQFGGHHLAINLTLAGSQASMTPSLPAAQPAAYTFEGREIRPLGKENDKAFAL
                     INALDDAQRGEAILKSRVADLVLGPGADGKLIQPEGIRASSLSAPQQTMLVELAREWT
                     GIVTDAFAEPRMAEIRKNLPDTYFAWSGPTTPGSVAYFRIQGPTLVVEYAPQKTVDHI
                     HTIYRDPTNDY"
     gene            complement(1225..1743)
                     /locus_tag="VFN38_01380"
     CDS             complement(1225..1743)
                     /locus_tag="VFN38_01380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010429.1"
                     /translation="MSHPLALAVFPAVDTAIAAARALHGIGISREQISVIARDHAESR
                     ALADRMDATPGVELEDSRLAARLGELSGHVLAAIALGLPGIGPIVAAGPLAAELGEAA
                     GHAAGSLASVLKGAGLPSARADALQREVAGGAVLVGAHIVGAHIAPPAVDAVRDALAA
                     AGATTVDVLNWP"
     gene            complement(1794..>2680)
                     /locus_tag="VFN38_01385"
     CDS             complement(1794..>2680)
                     /locus_tag="VFN38_01385"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HET9010430.1"
                     /translation="IGLTVEGVSAQLSHAWMGAMAGTLRLNDRTVPVRVRYPDAQRFD
                     PARLTSTTVRGKDGRLIPASALVTIANGAGDPELMRENLRPMALLRARLEDRDLGSAV
                     EEIKTMLAATPLPVGYTWEVGGQYESQQRSFRELLLVSVVATALVLLVLVVQFRTFTA
                     ALIILAAAPLSLGGAFVLLWLTGTDLNVSSAMGLILLVGLVVKNGIVLLDFVEMRRRE
                     GMAMREAILAAARVRLRPILMTTLCTLFGLLPLAFGAGAGAELQQPLALAVIGGLSLS
                     TIVTLYLVPAAYLALRWR"
BASE COUNT          409 a          944 c          937 g          390 t
ORIGIN      
        1 gtagtcattg gtcggatcgc gatagatggt gtggatgtga tcgacggtct tctgcggcgc
       61 gtactcgacg accagcgtcg ggccctgaat ccggaagtac gcgacgctcc ccggcgtcgt
      121 cggaccgctc cacgcgaagt aggtgtcggg gaggttcttg cgaatctccg ccatccgcgg
      181 ctcggcgaac gcgtcggtca cgatgcccgt ccactcccgc gcgagctcga cgagcatcgt
      241 ctgctgcggg gcggagagcg aggaggcgcg gatgccttcc ggctggatca gcttgccgtc
      301 cgcgccgggg ccgaggacga ggtcggccac gcgggatttc aagatcgcct cgccgcgctg
      361 cgcgtcgtcg agcgcgttga tcagagcgaa cgccttgtcg ttctccttgc cgagcgggcg
      421 aatctcgcgc ccctcgaacg tgtaggcggc cggctgcgcc gcgggaaggc tcggcgtcat
      481 gctcgcctga ctgccggcga gcgtcaggtt gatggccagg tgatggccgc cgaactgcag
      541 catccacggc gtcttcgtcg acggcgtgcc gacgaacgcg aggtagtact cgccctcgcc
      601 gaagaccacg ccgccgggac cgcgcccgcc ccctgccgcg ttggtccgca gcacgtcgtc
      661 gccgcgcatg atgtcgacga ccttgcgata gccgtccgcg ctgagcgccg ccgagagcag
      721 cgacatcgca gccgcacgct gggccggggt gagatccccg aggcgaagcc cctgacgttc
      781 gaaaatcccg gtcgggaggt tcgaccagcg cgtcttctgc ggaccgtcga aggggaattg
      841 caccttgccc ttcccggtgt cgtccagcgt cgctaccagc gcctgggcgg cggcgacgat
      901 gcggccggtc gtgtcggccg agctcgccgg ttttgcgccc ggcgtttgcg gtttgctctg
      961 accgacactg gagagggttg cggcaaacac gccggcgaca accaggagtg ccggcgcccg
     1021 aaagatgacg cgcatgtaga acctcccgcg acgctcgcct cagtgagaat ccgggtcggg
     1081 cacgggaggc gttccgtgcg tgtgaaacgt gctgaccgtc tgcaggcccc acgcctgccc
     1141 ttggcccgtt ccgcctgggt ccagacgacc ggcctccagt cgggatcgaa catcacgtag
     1201 ccgccgcgcg atgcaccagg tcgatcaggg ccagttcagg acgtcgactg tggtcgcccc
     1261 ggctgcggcg agcgcgtcgc gcacggcatc gactgcgggc ggtgcgatgt gcgctccgac
     1321 gatgtgcgct cccaccagca cggcgccgcc ggcaacctcg cgttgcaggg cgtcggcgcg
     1381 cgcggatggc aggccggcgc ctttgagcac cgacgcgagg ctgccggccg catggcccgc
     1441 ggcttcgccc agttcggccg ccaggggtcc cgcggcgaca atcgggccga tccccggcag
     1501 ccccagcgcg atcgcggcga ggacgtgccc gctcaattct ccaaggcgcg cggccagccg
     1561 cgaatcctcg agctccacgc cgggcgtcgc gtccatcctg tcggcaagcg cgcgcgactc
     1621 cgcgtgatca cgggcgatga ccgagatctg ctcccggctg atgccgatgc catgaagcgc
     1681 ccgtgcggcg gcgatggcgg tgtcgaccgc tggaaacacg gcgagcgcga gcgggtggga
     1741 catgtcccgc atcttaccgt aggtgcccgg cgcgcggagc gttcccgcag ctcctatcgc
     1801 cagcggagcg ccaggtacgc ggccggcacc aggtacaggg tgacgatcgt cgacaggctg
     1861 aggccgccga tcaccgccag cgccagcggc tgctgcagct ccgcgccggc gccggcgccg
     1921 aatgcgagcg gcagcagacc gaacagcgtg cacagcgtcg tcatcaggat gggtcgcagc
     1981 cgcactcgtg ccgcggcgag gatcgcctcg cgcatcgcca tcccctcgcg gcgccgcatc
     2041 tcgacgaagt cgagcagcac gatgccgttc ttgacgacca gcccgacgag caagatgagc
     2101 cccatcgccg acgacacatt gagatcggtt ccggtcagcc acaagaggac gaatgcgccg
     2161 ccgagcgaca gcggcgccgc cgcgaggatg atgagcgccg cggtgaacgt gcgaaactgc
     2221 acgaccagca ccaggagcac cagcgccgtg gcgacaacgg acacgagcag cagttcccgg
     2281 aacgatcgct gctgcgattc gtactggccg cctacctccc acgtgtagcc gaccggcagc
     2341 ggcgtcgctg cgagcatcgt cttgatctcc tccacggcgc ttcccagatc gcggtcctcg
     2401 aggcgcgccc gcagcagcgc catcgggcgg aggttctcgc gcatcagctc cgggtcgccg
     2461 gcgccgttcg cgatggtgac gagcgccgag gcgggaatga ggcgcccgtc cttgccgcgc
     2521 accgtggtcg acgtcagccg cgcgggatcg aagcgctgcg cgtcgggata gcgcacgcgc
     2581 acgggcacgg tgcgatcgtt gagccgcagc gtgccggcca tcgctcccat ccacgcgtgc
     2641 gacagctgcg ccgacacgcc ttcgacggtc aggcctattc
//
LOCUS       DASSYW010000085         3107 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_348036, whole genome shotgun sequence.
ACCESSION   DASSYW010000085 DASSYW010000000
VERSION     DASSYW010000085.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3107)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3107)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3107
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_348036"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..349)
                     /locus_tag="VFN38_01390"
     CDS             complement(<1..349)
                     /locus_tag="VFN38_01390"
                     /inference="COORDINATES: protein motif:HMM:NF014790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HET9010431.1"
                     /translation="MATNVAPRSTTSLDARVTAAAAAGPVLTPEMLQRFSDRAPQYDR
                     ENRFFDEDFEELRKAGYLTIAVPRELGGGGYTLADVCREQRLLGYHAPATALAVNMHL
                     YWTGLVADLWRAGD"
     gene            complement(362..1744)
                     /locus_tag="VFN38_01395"
     CDS             complement(362..1744)
                     /locus_tag="VFN38_01395"
                     /inference="COORDINATES: protein motif:HMM:NF017505.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008430 - selenium binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="selenium-binding protein SBP56-related protein"
                     /protein_id="HET9010432.1"
                     /translation="MKTLHGSPTQTLLALLLVVGAGASCARDDGTPTQPFTVPSASAD
                     RERDDDNGSGRRHERFIYAATIAQSASDPDFISVIGADPRYADYGQIVNRVDMPNVGD
                     ELHHIGYSSDQDRLIVPGLFSNRIHVFEIGRDRRSMQLAAVNDQLATRSGYIIPHSVI
                     ATGHGRALVTMIGAGTANTQPGGIVEINDRTGAYESTFGPGPVRAAGDLGPTYMYDFD
                     ALPSANRGISTTFGPPELCGGGIEPTCLGDEVAVWDLRQQKVVQIANLGAHSGALEVR
                     FLEGRGARRAFINTPGTSAVWLAEDDDRDGTYAFHQILGPADGLVLPVDMLVSYDERF
                     MYLTNWFGNTVQQFDITDPFHPVLRATTAMPHPNMLRLSPDNRRLYVSNSLLTPWDND
                     ARFGPPRNNDYGIWLFQVDETAGGLTPLHADGSAWVSFTNVHKKSTTGPAGPHMMFFD
                     PGIRLAPGEH"
     gene            1889..2458
                     /locus_tag="VFN38_01400"
     CDS             1889..2458
                     /locus_tag="VFN38_01400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HET9010433.1"
                     /translation="MTEPGVVTRLLAMASDGDRDAVDRLMPILYDELHRIAHARMRGE
                     RAGHTLGTTALLHEAYLELAGLNRMTWRDRAHFLAVAARAMRRVLIDYAVQRGAQKRE
                     GMRLAVPLDDVPDFLLLAGHGEHDVLGLDEALQRLAVVNERQCRVVECRFFAGMSVEE
                     TAEALRTSPATVKRDWTVARAWLHRELGT"
     gene            2455..>3107
                     /locus_tag="VFN38_01405"
     CDS             2455..>3107
                     /locus_tag="VFN38_01405"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HET9010434.1"
                     /translation="MSTRWYAEWHERLRFGLGRALLGRPSAGDLMLEVLEHRPEERAA
                     LLDRACAGDTALRRDVETLLAAHEAPGILDRPVARFAHLVVPSPPVEGRTVGRYELRE
                     QIGSGGMGIVHRAWDMALGRAVALKFLPSHLGDDTDARQRFRVEAQAVAALDHPNICA
                     IHEIGETDDGLLFIAMPYYEGDTVRARIRRGPLPVGEAVAIVRQAAEGLGAAHARGIV
                     "
BASE COUNT          451 a         1009 c         1162 g          485 t
ORIGIN      
        1 tgtcgccagc gcgccagagg tccgcgacga gcccggtcca gtacaggtgc atgttcacgg
       61 cgagcgccgt ggcgggcgcg tgatagccga ggaggcgctg ctcgcggcag acatcggcga
      121 gggtgtagcc gccaccgccc agctccctcg gcacggcgat cgtgagatag ccggccttcc
      181 gcaactcctc gaagtcctcg tcgaagaagc ggttctcgcg gtcgtactgc ggcgcgcgat
      241 cgctgaagcg ctggagcatc tccggcgtga gcaccggccc ggcggccgca gcggcggtga
      301 cgcgtgcgtc gaggctggtg gtggatcggg gcgcgacgtt ggtggccatg gattcctcct
      361 ctcagtgttc gccgggggcc aggcgaatgc ccggatcgaa gaacatcatg tgcgggccgg
      421 cgggccccgt ggtggacttc ttgtggacgt tcgtgaagct cacccatgca ctgccgtcgg
      481 catgtaacgg tgtgagccca ccggccgtct cgtcaacctg gaagagccag atgccgtagt
      541 cgttgttgcg cggcggcccg aagcgggcgt cgttgtccca cggagtgagc aacgaattgg
      601 atacgtagag gcgccggtta tccggactta gccgcagcat gttgggatgc ggcatggcag
      661 tggtcgccct gagcaccgga tggaagggat cggtgatgtc gaactgctgc accgtgttcc
      721 cgaaccagtt ggtcaggtac atgaaccgct cgtcgtacga cacgagcatg tccacgggga
      781 gcacgagccc gtcggccggg ccgagtatct gatggaaggc gtaggtgccg tcgcggtcgt
      841 cgtcctcggc cagccagacg gcgctcgtgc cgggggtgtt gatgaatgcg cggcgtgcgc
      901 cgcgcccttc caggaagcgg acctcgagcg cgccgctgtg cgcgccgagg ttggcgatct
      961 ggacgacctt ctgctgccgc aggtcccaca cggccacctc gtcgcccagg caggtgggct
     1021 cgatgccgcc gccgcagagc tcgggcgggc cgaaggtggt gctgatgccg cgattggccg
     1081 acgggagcgc gtcgaagtcg tacatgtacg tcggcccgag gtcgccggcg gcgcgcaccg
     1141 gaccgggacc gaaggtggac tcgtaggcgc cggtgcgatc attgatctcg acgatgccgc
     1201 caggctgcgt gttcgcggtg ccggcgccga tcatcgtgac cagcgcgcgg ccgtgccctg
     1261 tggcgatcac gctgtgcggg atgatgtagc cgctgcgcgt ggccagctgg tcgttgacgg
     1321 cggcgagctg catgctcctg cggtcgcggc cgatctcgaa gacgtgaatc cggttcgaga
     1381 agagacccgg cacgatcagg cggtcctgat cgctcgagta gccgatgtgg tgcagctcgt
     1441 cgcccacgtt gggcatgtcg acgcggttga cgatctggcc gtagtccgcg tagcggggat
     1501 cggcgccgat cacgctgatg aagtccggat ccgacgcgct ctgcgcgatg gtggcggcgt
     1561 agatgaagcg ctcgtggcgt ctgccactgc cgttgtcgtc gtcacgttcg cggtcggcgg
     1621 atgcagacgg cacggtgaac ggctgcgtcg gcgtgccgtc gtcgcgcgca cacgatgccc
     1681 cggcaccgac gacgagcagc agggcgagca gagtctgggt cggacttcca tgaagcgtct
     1741 tcatcgccgg acctcctctg gagcgggacg ccgatcgtcc cggtaatccc ataggccgga
     1801 aacgccgatg aatcggctca tcgcgcggaa cgggattccg cccgcccctg tccgtgctat
     1861 cttgccggcg acagggggac gctcagtgat gaccgagccc ggagtggtga cgcgcctgct
     1921 cgccatggca tccgacgggg accgcgacgc ggtggatcgc ctgatgccca ttctctacga
     1981 cgagctgcat cgcatcgcgc acgcgcgcat gcgcggggag cgtgcgggcc acacgctcgg
     2041 caccacggcg ctgctgcacg aggcatatct cgagctcgcg gggctgaacc gcatgacctg
     2101 gcgcgaccgc gcgcactttc tcgccgtcgc cgcgcgagcg atgcgacgcg tgctgatcga
     2161 ctacgccgtg cagcgcggcg cgcagaagcg cgaggggatg cgtctcgccg tgccgctcga
     2221 cgacgtcccc gacttcctgc tcctcgccgg ccacggcgag cacgacgtcc tcggcctgga
     2281 cgaagcgctg cagcgcctcg ccgtggtcaa cgagcggcag tgccgagtgg tggagtgccg
     2341 cttcttcgcg ggcatgagcg tggaggagac ggcggaggca ttgcgcacgt cgccggccac
     2401 ggtgaagcgc gactggaccg tcgcgcgcgc ctggctgcac cgcgagctcg gcacatgagc
     2461 acgaggtggt acgccgagtg gcacgagcgc ctgcgcttcg gcctcggccg cgcgcttctc
     2521 ggccggccgt cggccggcga cctgatgctg gaggtgctgg agcaccggcc ggaggagcgg
     2581 gcagcgctgc tcgatcgggc gtgcgccggt gacaccgcgc tgcgacggga cgtggagacg
     2641 ctgctggcgg cgcacgaggc gccgggcatc ctcgaccgtc ccgtcgcccg cttcgcgcac
     2701 ctggttgtcc cgtcgccacc agtggaggga cgcaccgtcg ggcgatacga gctgcgcgag
     2761 cagatcggca gcggcgggat gggcatcgtg catcgcgcct gggacatggc gctcggccgc
     2821 gcggtcgccc tgaagttcct gccgagccac ctcggcgacg acaccgacgc gcggcagcgc
     2881 ttccgcgtgg aggcacaggc ggtcgccgcg ctcgatcatc cgaacatctg cgccattcac
     2941 gagatcggcg agacggacga cgggctgctg ttcatcgcca tgccgtacta cgagggagac
     3001 accgtgcggg cgcgcatccg tcgcgggccg ctgccggtgg gcgaggcggt ggcgatcgtg
     3061 cgccaggcgg cggaggggct gggggcggcg cacgcgcgag ggatcgt
//
LOCUS       DASSYW010000086         2389 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_661106, whole genome shotgun sequence.
ACCESSION   DASSYW010000086 DASSYW010000000
VERSION     DASSYW010000086.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2389)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2389)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2389
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_661106"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1171)
                     /locus_tag="VFN38_01410"
     CDS             complement(<1..1171)
                     /locus_tag="VFN38_01410"
                     /inference="COORDINATES: protein motif:HMM:NF024907.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VCBS repeat-containing protein"
                     /protein_id="HET9010435.1"
                     /translation="MTRCTTRKRRPTDGGWRARFACAALLASIAVTSAQRAPDLFVDR
                     TAELGVDATHVNGATGELLLPEVIGPGGALFDFDNDGDLDLFVLQGRATNRLFRNDVD
                     PASRTRRFTDVTARSGLGVAGYGMGATAGDYDGDGWLDLYVTNLGPNRMFRNNGDGTF
                     SDRTAATRTDDPRWSTGATFFDYDRDGWLDLFVVNYVTFSRDVKRACYAASSARDYCN
                     PSVYPPASATLFHNDGNGTFTDVSARAGVARAAGRGLGVLAADVDGDGFTDVYVANDG
                     DPNHLWLNQRGSGVFKEEALLAGVALNRTGQPQGSMGVDLGDADGDGDEDLFVTNLDN
                     EGNTFYRNQGGGLFEDRTVEAGLFKLGSTGFGTRLVDYDNDGWLDVVVANGAVRHM"
     gene            complement(1134..>2389)
                     /locus_tag="VFN38_01415"
     CDS             complement(1134..>2389)
                     /locus_tag="VFN38_01415"
                     /inference="COORDINATES: protein motif:HMM:NF015649.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HET9010436.1"
                     /translation="DPGKAAGLFEQTLTLQPDHVPSLVWLAEMRLAQNRTADARPLLL
                     KAQSLAPGEPAVLFGLGRVALDAREYGAAVKDLEGALALAPAATRVHYPLAMAYRGLG
                     DVNQAEAHLKLRGETPLPPADPLMGEVRALLTNAAALETRGVQAMDARDWPGAVKVLR
                     EAVALSPDNAGTRLNLGTSLYASGDPDGALEQYRAAVRLSPALARAHFGIGVVLESRR
                     QDREAIEAFSAAVRSDPAYDEARFTLAEALRRSGRVEESLTHYDAVLQHNPSVSQASF
                     GYAMGLVRLKRYREARERLERDARTFADQPGIAHALARLLAAAPDDRVRDGARALALV
                     TPLAEAQRSPAVVETMAMALAETGRFDEAVRLQTELLQMARRGGRADLVPHLAANLRL
                     YQARRPCRIPWTDDDPVHHPQASPN"
BASE COUNT          325 a          882 c          835 g          347 t
ORIGIN      
        1 ccatgtgccg caccgccccg ttcgccacca ccacgtcgag ccagccgtcg ttgtcgtagt
       61 ccacgagccg cgtgccgaat cccgtggacc cgagcttgaa cagccccgcc tccacggtgc
      121 ggtcctcgaa cagtccgccg ccttgattgc gatagaacgt gttgccctcg ttatcgaggt
      181 tggtcacgaa gaggtcttcg tcgccatcgc cgtcggcgtc gccgaggtcc acacccatgc
      241 tgccctgcgg ctgcccggtg cgattgagcg ccacgccggc cagcagcgcc tcctccttga
      301 agacgccact gccgcgctga ttgagccaca gatgatttgg atcgccgtcg ttggccacgt
      361 acacgtcggt gaagccgtcg ccgtccacgt cggcggccag cacgccgagc ccgcggccgg
      421 ctgcgcgcgc cacccccgcg cgcgccgaca cgtcggtgaa cgtgccgttg ccgtcgttgt
      481 ggaagagggt ggccgaggcc ggcggataca ccgacggatt gcagtagtcg cgggcggagc
      541 tggcggcgta gcacgctcgc ttcacgtcgc ggctgaacgt cacgtagttg acgacgaaga
      601 ggtccagcca cccgtcgcgg tcgtagtcga agaacgtggc gccggtgctc caccgcgggt
      661 cgtcggtgcg cgtggccgcc gtgcggtcgc tgaaggtacc gtcgccgttg ttgcggaaca
      721 tccggttcgg cccgaggttc gtcacgtaga gatcgagcca gccgtcgccg tcgtagtcgc
      781 ctgccgtcgc gcccatgccg tagccggcca cgcccaggcc gcttcgggcg gtgacgtccg
      841 tgaagcgccg ggtccggctc gcgggatcga cgtcgttgcg aaacagccgg ttcgtggcgc
      901 gcccctgcag gacgaagagg tcgagatcgc cgtcgttgtc gaaatcgaac agcgcgccgc
      961 ctggcccgat gacttccggc agcagcagct cgccggtcgc cccgttcacg tgcgtggcgt
     1021 ccacgccgag ctccgcggtg cgatcgacga acaggtccgg cgcgcgctgc gccgacgtga
     1081 cggcgatcga cgccagcagc gcggcacagg cgaaccgcgc ccgccagccg ccgtcagttg
     1141 ggcgacgctt gcgggtggtg caccgggtca tcatcggtcc acggaatgcg gcacggacgc
     1201 cgcgcctggt acaaccgcag gttggccgca aggtgcggca ccagatccgc gcggccgcca
     1261 cgccgcgcca tctgcagcag ctcggtctgc agacgcaccg cttcgtcgaa gcggccggtc
     1321 tcggcgagcg ccatcgccat cgtctcgacg accgccggcg agcgctgggc ctccgcgagc
     1381 ggcgtcacga gcgccagcgc gcgcgcgccg tcgcgcaccc gatcgtctgg cgcggcggcc
     1441 agcaggcgcg caagcgcatg cgcaattcca ggctggtcgg cgaacgtgcg cgcgtcccgt
     1501 tccagccgct cgcgcgcctc gcggtagcgc ttcagccgca cgagccccat cgcgtagccg
     1561 aagctcgcct gcgacacgct cgggttgtgc tggagcaccg cgtcgtagtg cgtgagcgac
     1621 tcctcgacgc ggccgctgcg gcgcagcgct tcggccagcg tgaagcgcgc ttcgtcgtac
     1681 gccgggtcgc tgcggacggc ggcgctgaac gcctcgatcg cctcgcgatc ctggcgccgc
     1741 gattcgagca cgacgccgat gccgaagtgg gcgcgcgcga gcgccggcga caggcgcacg
     1801 gccgcccgat actgttcgag cgcaccgtca gggtctcccg aggcgtagag cgacgtcccg
     1861 aggttcaggc gcgtgcccgc gttgtccggc gacagcgcca cggcctcgcg cagcactttg
     1921 acggccccgg gccagtcgcg cgcgtccatc gcctgcacac cgcgtgtctc gagcgccgcc
     1981 gcgttggtca ggagcgcccg cacctccccc atcagcggat cggccggcgg caggggtgtt
     2041 tcaccccgca gcttcaggtg cgcctcggcc tggttcacgt cgccgagccc gcggtacgcc
     2101 atcgccagcg ggtagtggac gcgcgtggcc gccggcgcca gcgccagcgc gccctcgaga
     2161 tccttcaccg ccgcgccata ctcgcgcgcg tcgagtgcga cgcggccgag gccgaacagc
     2221 actgccggct cgccgggcgc gagcgactgc gccttgagca ggagcggcct ggcatccgcc
     2281 gtccggttct gcgccagccg catctccgcc agccagacga gggacggcac gtgatccggt
     2341 tgcagcgtca gggtctgctc gaagagaccg gcggccttgc cggggtcgt
//
LOCUS       DASSYW010000087         2357 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_421741, whole genome shotgun sequence.
ACCESSION   DASSYW010000087 DASSYW010000000
VERSION     DASSYW010000087.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2357)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2357)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2357
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_421741"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1332
                     /locus_tag="VFN38_01420"
     CDS             <1..1332
                     /locus_tag="VFN38_01420"
                     /inference="COORDINATES: protein motif:HMM:NF012385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HET9010437.1"
                     /translation="AAECGLGIVEVSDPAAFDRLVGTVGLIAAAGEEAQIEPALLQMV
                     GGSSPIAAVGAVEDHRLAAAVVRAGAAAYFALPGDYDLLQSWLREQADVLRAQLSASV
                     FTAAERQKYRFEGILGDSAALHAALDRAARVIPHATATVLLAGETGTGKELLARAIHY
                     DGPRHAAPFVDINCAAIPEQLLESELFGHEKGAFTSATGAKPGLFELANGGTLFLDEI
                     GHLALPLQGKLLRALEERVIRRVGGTRNIAFDVRLIAATHVDLADAVKRGAFREDLYY
                     RLNVVPIALPSLRARREDIVPLAEHFLQRFAGDYGVARPRLAPEAAEALRARDWPGNI
                     RELRNIMERAVLLARAPLLTPDDFEPVSGAGAAPEPAIPFPAPLGAVISAAVHGMLAL
                     CGGNKSEAARRLGISRPRLLRLLAGGGDDVDSRDDDPTDPDSHETYEARHA"
     gene            1325..1963
                     /locus_tag="VFN38_01425"
     CDS             1325..1963
                     /locus_tag="VFN38_01425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010438.1"
                     /translation="MRNRRFAPLLCTAVGVALLGALSGCDSGGPTAADGDIRPADAMH
                     FLRPAVTAPPLANPSVAFYAVRGEDREAFIYYRPAAGSADSSYFVRFKVPGASLERRP
                     DGSLIPPGDSVLITINVSDPSRLIVDFQPSGLRFSASTPAELKLDFGEASHDIDGDGD
                     EDAEDVARETQLSIWKQEAPGLPWVRLTSVVDFSAEEVEAKVIGFTGYAIAY"
     gene            1994..>2357
                     /locus_tag="VFN38_01430"
     CDS             1994..>2357
                     /locus_tag="VFN38_01430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010439.1"
                     /translation="MTPSTLDDGLLQKARARAGAGAWPEVAAMLRDAVEPVAARPERV
                     TLYAEALMRSGEPRRACDCLREALPALSHGANRSAHRTALNLLGAASFAVGALDDAQM
                     AWDRALELAQQSSDPLLVG"
BASE COUNT          305 a          894 c          832 g          326 t
ORIGIN      
        1 gccgccgagt gcgggctcgg catcgtcgag gtgtccgacc ccgccgcgtt cgatcggctg
       61 gtcgggacgg tggggctcat cgcggcggcg ggagaggaag cgcagatcga gcctgccctg
      121 ctgcagatgg tcggtggcag cagccccatc gccgccgtcg gcgcggtgga agaccaccgg
      181 ctcgcggcgg cggtggtgcg ggccggtgcg gcggcgtact tcgcgctgcc aggcgactac
      241 gacctgctcc agtcctggct gcgcgagcag gccgacgtgc tgcgagcaca gctcagcgcc
      301 agcgtcttca ccgcggccga gcgacagaag taccgcttcg agggaatcct cggcgacagc
      361 gccgccctcc acgccgcgct cgaccgcgcc gcgcgcgtga tcccgcacgc cacggccacc
      421 gtgctgctgg ccggcgagac cggcaccggc aaggagctgc tcgcgcgcgc catccattac
      481 gacggcccgc gccacgccgc tcccttcgtg gacatcaact gcgcggccat ccccgagcag
      541 ctgctcgaga gcgagctgtt cggccacgag aagggcgcct tcaccagcgc gacgggcgcc
      601 aagccggggc tcttcgagct ggccaacggc ggcaccctgt ttctcgacga gatcggccac
      661 ctcgccctcc cgctgcaggg caagctgctg cgcgcgctgg aggaacgcgt catccgccgc
      721 gtcggcggga cgcggaacat cgccttcgac gtccggctga tcgcggccac gcacgtggac
      781 ctcgcggacg ccgtgaagcg cggtgcgttc cgcgaggatc tctactatcg gctgaacgtc
      841 gtgcccatcg cgctcccttc gctgcgcgcg cggcgcgagg acatcgtgcc gctggccgaa
      901 cacttcctcc agcgctttgc cggggactac ggcgtcgcgc ggccccgcct cgccccggag
      961 gcggcggagg cgctccgcgc gcgggactgg ccgggcaaca tccgggagct gcgcaacatc
     1021 atggagcgcg cggtgctgct ggcgcgggca ccgctgctca cccccgacga cttcgaaccg
     1081 gtgagcggtg cgggcgccgc tcccgagccg gcgatcccct ttcccgcgcc gctcggcgcg
     1141 gtgatctccg ccgccgtgca cggcatgctc gcgctctgcg gcgggaacaa gagcgaggcg
     1201 gcgcggcggc tcggcatctc ccggccgcgg ctgctgcgcc tgctggccgg cggcggtgac
     1261 gatgtggaca gccgcgacga cgatcccacc gatcctgact cccacgagac ctacgaggct
     1321 cgccatgcgt aatcgccgct tcgcccccct tctctgcacc gccgtcggcg tggcgctcct
     1381 cggcgcgctc tccggctgcg actccggcgg cccgaccgcc gccgacggcg acatccgccc
     1441 ggcggacgcc atgcacttcc tgcgaccggc ggtcaccgcg ccgccgctcg ccaacccgtc
     1501 ggtggcgttc tacgccgtgc gcggcgagga ccgggaggcg ttcatctact accggccggc
     1561 ggccggcagc gcggactcct cctacttcgt gcgcttcaag gtgccgggcg cgtcgctcga
     1621 gcgccgtccc gacggatcgc tcattccgcc gggcgactcc gtgctcatca ccatcaacgt
     1681 ctccgacccg tcgcgcctga tcgtcgactt ccagccgtcg gggctgcgct tctccgcgtc
     1741 cacgcccgcg gagctgaagc tcgacttcgg cgaggcgagc cacgacatcg atggcgacgg
     1801 cgacgaggac gcggaagacg tcgcgcgcga gacgcagctc agcatctgga agcaggaggc
     1861 accgggcctg ccctgggtcc gcctgacgag cgtcgtggac ttcagtgccg aagaggtgga
     1921 agcgaaggtg atcggcttca ctggttacgc gatcgcgtac tgaccgcacg ccaccccctt
     1981 cccgcctatc tcgatgaccc cctccactct cgacgacggc ctgctgcaga aggcgcgcgc
     2041 acgcgccggc gccggcgcgt ggccggaagt ggcggccatg ctgcgtgacg cggtggagcc
     2101 ggtggcggcg cggccggagc gggtcacgct gtacgccgaa gcgttgatgc gctcgggcga
     2161 gccgcgccgc gcctgcgact gcctgcggga ggcgctgccc gcgctgtcgc acggcgccaa
     2221 ccggtccgcc catcgcaccg cgctcaacct gctcggtgcg gcgagcttcg ccgtcggcgc
     2281 gctcgacgac gcgcagatgg cgtgggaccg cgcgctggag ctcgcgcagc agtcgagcga
     2341 tccgctgctc gtggggc
//
LOCUS       DASSYW010000088         3127 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_182062, whole genome shotgun sequence.
ACCESSION   DASSYW010000088 DASSYW010000000
VERSION     DASSYW010000088.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3127)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3127)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3127
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_182062"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..238)
                     /locus_tag="VFN38_01435"
     CDS             complement(<1..238)
                     /locus_tag="VFN38_01435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC ligand binding domain-containing
                     protein"
                     /protein_id="HET9010440.1"
                     /translation="MITTIVLIRAEPASIPATAQFLAEIDGVTDVYSVSGEWDLVAIV
                     KVAEYDQIAKVVTESFPKVPGLQRTQTLTAFRAYS"
     gene            complement(235..747)
                     /locus_tag="VFN38_01440"
     CDS             complement(235..747)
                     /locus_tag="VFN38_01440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010441.1"
                     /translation="MNIAVQLEPCTGSPPSVQYRWDADTDILTARLDTREEGSGPSGS
                     LELEGSDGAWIILDVVKGRILGLEVAVWPDVRKRASLAAPATTENAHAVVRQHGSEPG
                     AMLLEIETPMLAESDESERVIYFRIGAKRPVRTVRIGRDLLLDLDPQNRLAGLWLLNV
                     PPFPSTRPAP"
     gene            1018..2694
                     /locus_tag="VFN38_01445"
     CDS             1018..2694
                     /locus_tag="VFN38_01445"
                     /inference="COORDINATES: protein motif:HMM:NF015817.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DbpA RNA binding domain-containing protein"
                     /protein_id="HET9010442.1"
                     /translation="MTRGQNAVHLMPLDWSAAERVVATLVDRIDVARVETQLLVVTAD
                     AESAAAAAEAIVHAAGGRAVRVIAATSSPRAARLLKGSPAHVVAGAPAELAALLQGSA
                     LKPESVRGVVFAWLDPILGTADATPLETLLGELPKEGARVVLAAELTPALEALIERYA
                     RRARRAVEPAADAAMAPLNAEYVATAGTARAVTLRRLLDALDLPRAVLYARSETIRAD
                     AQRVARSLGYPADAVRVSAEGDEPSGDPLVLVELPTSREELRALVGTSGRRIYAVVQL
                     SQLPSLRGLLGGGTVAPVALLDAAERARGKDAAMRSSLRDVLASGDVRREVLALEPLL
                     AEFDGIEIAAAALRILEQQRPARPAAAAAAQSQPMQRLFVNLGEKDGIRAQEIITAIT
                     TEAGIPGSQVGKVEVRDTHSLVEVAASVAELVAGKITGSVVRGRRVQARLDTPREDRP
                     ARSAPPVRGDRPARSFSDRGDRGERPPRSGPPRGDRPERGDRPARPSYDKGDRGDRPA
                     RSGPPRGASPRSDRPDRPARPFNAVRKFDRDGGAGGTGRPTRPRPRRDDA"
     gene            2691..>3127
                     /locus_tag="VFN38_01450"
     CDS             2691..>3127
                     /locus_tag="VFN38_01450"
                     /EC_number="2.7.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004797 - thymidine kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine kinase"
                     /protein_id="HET9010443.1"
                     /translation="MIGDMYPAGGGGWIEVVCGVMFSGKSEELIRRVRRALIAKKRVQ
                     VFKSHLDERYAGLYHVSSHDGRTVEAVPVDSPEQISRELLADTQVVAIDEAQFLPIGI
                     VELATALAASGRRVILAGTDTDFRGEPFGPMPQLLAIAEQVDKL"
BASE COUNT          416 a         1097 c         1200 g          414 t
ORIGIN      
        1 tcgaataggc tcggaacgcc gttagcgtct gggtccgctg cagccccggg accttcggga
       61 agctctccgt caccaccttc gcgatctggt cgtattcggc gaccttgacg atcgcgacga
      121 gatcccattc gccgctcacc gagtagacgt cggtcacgcc gtcgatctcg gccaggaact
      181 gcgccgtggc cggaatagat gcgggctcgg cccggatgag tacgatcgtc gtgatcacgg
      241 cgcgggtcgg gtggagggaa agggaggcac gttcaggagc cagaggccgg cgaggcggtt
      301 ctgcgggtcg aggtcgagca ggagatcgcg gccgatccgc acggtgcgca cggggcgctt
      361 ggccccgata cgaaagtaga tcacccgctc ggattcgtcc gactcggcga gcattggcgt
      421 ctcgatctcc agcaacatgg cgccgggctc gctcccgtgc tgccgcacga cggcgtgcgc
      481 attctccgtc gtggcggggg ccgccaggga ggcccgcttg cggacgtcgg gccagaccgc
      541 cacctcgagg ccgaggatcc gtcccttcac gacgtcgagg atgatccagg cgccgtccga
      601 cccctcgagc tccagggagc cggatggtcc cgatccctcc tcgcgcgtgt cgaggcgggc
      661 cgtgaggatg tccgtatcgg cgtcccaccg atactggacg ctgggaggcg agccggtgca
      721 cggctccagc tgcacggcga tgttcacgga gctcctcgct cggccacgac tgaagtagcg
      781 gcggcgcgcg ccggcgccgg cgcccttccg ccgcgcggcg gcgcgaacgc tcgccgcgat
      841 ccacccggcg cgaacagata taccgaccgc cccgccgcgg agacaggggg tccgtcggtg
      901 gccggcggtg cggcgcccgg ctaccttccg gaacgttgac aatttggcgg cgcgcacgag
      961 cgtgcccgga ccggagcgag ggaatccgtg gagagtgaag cgagggagtc ggcgggtgtg
     1021 acccgtgggc agaatgcggt gcacctgatg ccgctggact ggtccgccgc cgagcgcgtc
     1081 gtggcgacgc tggtcgaccg gatcgatgtg gcgcgcgtcg agacgcagct gctcgtggtg
     1141 acggccgacg ccgagagtgc ggcggccgcc gccgaagcga tcgtgcacgc cgcgggcggg
     1201 cgggcggtac gcgtcatcgc cgccacctcc agccctcgcg ccgcgcgcct gctcaagggg
     1261 tcgccggccc atgtcgtcgc cggcgcgccg gccgagctgg cggcgctgct ccagggctcg
     1321 gcgctcaagc cggaaagcgt gcgcggcgtg gtgttcgcct ggctcgatcc catcctcggc
     1381 accgcggacg cgacgccgct ggagaccctg ctcggcgagc tgcccaagga gggcgcccgc
     1441 gtggtgctcg cggccgagct gacgcccgcg ctggaggcgc tgatcgagcg ctatgcgcgg
     1501 cgcgcccggc gcgccgtgga gcccgccgcc gatgcggcca tggcgccgct gaacgcggag
     1561 tacgtcgcga cggcggggac ggcgcgcgcc gtgacgctgc gccggctgct cgacgcactc
     1621 gacctgccac gcgccgtgct gtacgcccgc agcgagacca ttcgggccga cgcacagcgc
     1681 gtcgcgcggt cgctcggcta tcccgccgac gcggtgcgcg tgagcgccga gggcgacgag
     1741 ccgagcggcg atccgctggt gctggtggag ctgcccacct cgcgcgagga gctgcgcgcg
     1801 ctcgtcggca cgtcgggccg ccgcatctac gcggtggtgc agctgtccca gctgccgagc
     1861 ctgcgcgggc ttctcggtgg cgggacggtg gcaccggtcg ccctgctgga tgcggccgag
     1921 cgcgcgcgcg ggaaggacgc cgcgatgcgc tcgtcgctcc gtgacgtgct cgcgtcgggc
     1981 gacgttcggc gcgaagtgct ggcgctggag ccgctgctcg cggagttcga cggaatcgag
     2041 atcgcggcgg cggcgctgcg catcctggag cagcagcgtc ccgcgcgccc cgcggccgcc
     2101 gccgcggcgc agagccagcc catgcagcgg ctgttcgtga acctcggcga gaaggacggt
     2161 atccgcgcgc aggagatcat caccgcgatc accacggagg cgggcattcc ggggtcacag
     2221 gtgggcaagg tggaggtgcg cgacacccac tcgctggtgg aagtcgcggc gtcggtggcc
     2281 gagctggtgg ccgggaagat caccggcagc gtggtgcgcg gacggcgggt gcaggcgcgg
     2341 ctcgacaccc cgcgcgagga tcggccggcg cgcagcgccc cccccgtgcg cggcgatcgg
     2401 cccgcacgct cgttcagcga tcgcggcgat cgcggtgagc gtccgccgcg cagcggacca
     2461 ccgcgcggcg accgtcccga gcgcggcgac cggccggcgc gaccctcgta cgacaagggc
     2521 gatcgtggcg accggccggc gcgcagcggg ccgccgcgcg gcgcctcccc gcggagcgat
     2581 cggcccgatc ggccggcccg ccccttcaac gccgtgcgca agttcgatcg cgacggcggg
     2641 gccggtggca cgggccgtcc gactcgtccc cgtccgcgcc gcgacgacgc atgatcggcg
     2701 acatgtaccc cgccggcggt ggcgggtgga tcgaggtggt gtgcggcgtg atgttcagcg
     2761 gcaagagcga ggagctcatt cgccgcgtgc gccgcgcgct catcgccaag aagcgcgtcc
     2821 aggtgttcaa gtcgcacctg gacgagcggt acgcggggct ctaccacgtg tcgagccacg
     2881 acggtcgcac ggtggaggcg gtgccggtgg attcgccgga gcagatctcc cgcgagctgc
     2941 tcgccgacac ccaggtcgtg gccatcgacg aagcgcagtt cctccccatc ggcatcgtgg
     3001 agctggcgac ggcgctggcg gccagcgggc ggcgggtgat cctcgccggc accgacacgg
     3061 actttcgcgg tgagccgttc ggacccatgc cgcagctgct ggcgatcgcc gagcaggtgg
     3121 acaagct
//
LOCUS       DASSYW010000089         4025 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_753474, whole genome shotgun sequence.
ACCESSION   DASSYW010000089 DASSYW010000000
VERSION     DASSYW010000089.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4025)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4025)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4025
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_753474"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(138..1670)
                     /locus_tag="VFN38_01455"
     CDS             complement(138..1670)
                     /locus_tag="VFN38_01455"
                     /inference="COORDINATES: protein motif:HMM:NF013717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin dinucleotide binding
                     domain-containing protein"
                     /protein_id="HET9010444.1"
                     /translation="MARWNELLWPRQYPLSHYEMSFLLPHLLREQARKLDVYFTRVYN
                     PVWTNPDGCSWIEMLEDETRVGCHVALTPIWSETAQWADYVLPTGLASERHDLMSQET
                     HAGTWIGFRQPVERERRRRAGETVTSTLGTNPGEVWEEAEFWIALTHAIDPDGSRGIF
                     RYYESKQAPGRPVTLDEYFADIFDKAVPGLPAAAARRGMAPLEYMRRFGAFDVPYAGQ
                     ERYEQAAPAIGAAPTITAAGVVQEEGGVRAGFKTPSGRLEFHSPTLAAWGHAEQSIPR
                     YVRSHVHWRNLEAGEMTLLPTFRLPTLVHTRTGNSKWLQEISHTNPLWVHPRDAERLG
                     LRNGALTRVTTRIGYFVLRVWVTEGIHPGVVGCSHHFGRWRLHREVGGEKQCSAHVEL
                     LRRDAHFLMRQKEDVGPFASSDPDTSRIWWQEAGVNQNLTFPVQPDPVSGMHCWHQKV
                     RVTPAAADDRYGDIAVDTSKSRAVFDEWLALTRPAPGPGGLRRPLWLNRPLRPTAEAY
                     RL"
     gene            complement(1710..2849)
                     /locus_tag="VFN38_01460"
     CDS             complement(1710..2849)
                     /locus_tag="VFN38_01460"
                     /inference="COORDINATES: protein motif:HMM:NF012602.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HET9010445.1"
                     /translation="MSPEFRSHPDPAQWDDYVDYESTSWSKKDRRHYWIIPSICFNCE
                     SACGILAYVDKDALTVRKIEGNPLHPGSRGRTCAKGVVTPNQLDDPDRILYPLKRDGA
                     RGSGKWRQVSWNDALDEIGARIRAAIVEDRRHEIMYHVGRPGEDGYANRVLQSWGIDG
                     HNSHTNVCSSSARLGHFLWCGNDRPSPDYANAETILLLSSHLETGHYFNPHAQRIMDA
                     KQAGARLAVVDTRLSNTASHADLWIAPWPGSEGALLLGVARELLRRGTWNQAFVQRWV
                     NWQETLGALDPQGAGTFARFVEFLEEQYAAFTPEFVAEECRIPADTVMRLADEIATAG
                     TRFSSHLWRNTASGNLGGWQVARALLLLHVLTGSIGTRGGVNPNT"
     gene            complement(2846..>4025)
                     /gene="nrfD"
                     /locus_tag="VFN38_01465"
     CDS             complement(2846..>4025)
                     /gene="nrfD"
                     /locus_tag="VFN38_01465"
                     /inference="COORDINATES: protein motif:HMM:NF015851.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NrfD/PsrC family molybdoenzyme membrane anchor
                     subunit"
                     /protein_id="HET9010446.1"
                     /translation="EKCNFCANRVENQLLPACVSVCPTECRIFGDLDDPASEVARIAH
                     LNGVDVRKPEKNTIPKVFYLGAAPVTIQPELAVRPFIYKEGQVLLRPLGSPSPSAATP
                     GDARVDYDTPHVNPWGFDMALYLLAKGIATGTMLVSLLLPLLYGDRPPLALTAGPAIS
                     LVFLIATAVILVADLERPERFYYILVRPNWRSWLVWGAYFLTAQGALTTMWLAARAMG
                     FGSVLPIILWPLAIASVLTTCYTGFLFAQARARDLWQGPIATIDLLAQAIAEGAAVLL
                     ILAAFLPGLTDAGFGRALAWTLVGAMLVHVALLVGEHVVRKSPTRHHALAADAIRRGP
                     YARLFWFGAIAAAAAVIVFTALSTHVPIALAASAVLALASSFAWEYVWVEAGQCVPLS
                     "
BASE COUNT          640 a         1366 c         1397 g          622 t
ORIGIN      
        1 gagcccgcgg ttcacggcgc gcccccaatc gcccgctccc cggtgatgtg accgtggcga
       61 accaggcgaa gcgttccagc gcttgatccc gattcacagc cccggcgaca cggaacccgc
      121 ggcgccgagc gtcgcgctca gaggcggtac gcttcagccg tcgggcgcag ggggcggttg
      181 agccagagcg gccgccgcag gcctcccggg cccggcgccg ggcgtgtgag ggccagccac
      241 tcgtcgaaca ccgcgcgcga cttggacgtg tcgacggcga tgtcgccgta gcggtcgtcg
      301 gcggcagcag gcgtgacgcg caccttctgg tgccagcagt gcatgccgct caccggatcg
      361 ggctgcacgg ggaacgtcag gttctggttg acgccggcct cttgccacca gatgcgcgac
      421 gtgtccgggt cgctgctcgc gaacggtccg acatcctcct tctggcgcat gaggaagtgc
      481 gcgtcgcggc gcaggagctc gacgtgcgcc gagcattgct tctcgccgcc gacctcacgg
      541 tgcagccgcc agcgcccgaa atggtgcgag cagccgacga cgccgggatg gatgccctcg
      601 gtcacccaca cgcggagcac gaagtaaccg atgcgcgtcg tcacccgcgt cagcgcacca
      661 ttgcgaaggc cgagcctctc ggcgtcgcgc gggtgcaccc agagcgggtt ggtgtgcgag
      721 atctcctgca gccatttgga gttcccggtg cgtgtgtgca ccagcgtcgg cagccggaag
      781 gtggggagaa gcgtcatctc gccggcttcg aggttgcgcc agtgcacgtg cgaacgcacg
      841 taccgaggaa tggattgttc ggcgtgcccc cacgccgcga gcgtcggcga gtggaactcg
      901 agccggccgc tcggcgtctt gaatccggcg cggacgccgc cctcttcctg caccacaccg
      961 gccgccgtaa tcgtcggggc cgccccaatc gccggggccg cttgctcgta gcgctcctgc
     1021 ccggcgtacg gcacgtcgaa ggcaccgaag cgccgcatgt actcgagcgg cgccatgccg
     1081 cgccgcgccg ccgccgccgg caatcccggc accgccttgt cgaagatgtc ggcgaagtat
     1141 tcgtccagcg tcaccggccg gccgggtgcc tgcttcgact cgtagtagcg gaagatgccg
     1201 cggctgccgt cgggatcgat ggcgtgcgtg agcgcgatcc agaactccgc ttcttcccac
     1261 acctcgccgg gattcgtgcc gagcgtcgac gtcaccgtct ctccggcacg ccggcgccgt
     1321 tcgcgttcga cgggctgacg gaagccgatc caggtgccgg cgtgcgtctc ctggctcatc
     1381 aggtcgtgcc tctccgaggc caaccccgtc ggcaacacgt agtcggccca ctgcgccgtc
     1441 tccgaccaga tcggcgtcag cgccacgtga caaccgacgc gcgtctcgtc ctccagcatc
     1501 tcgatccaag agcagccatc cgggttcgtc cacaccgggt tgtagacgcg cgtgaagtag
     1561 acgtcgagct tccgcgcttg ctcgcgcagc aggtgcggca ggaggaagct catctcgtaa
     1621 tggctgagcg gatactggcg cggccacagg agctcgttcc aacgcgccac cggtggcggc
     1681 tcgaggcttg gcttggggac gaacttgtcc taggtgttcg ggttgacgcc gccacgcgtg
     1741 ccgatgctgc ccgtcaacac gtgcagcaag agcagcgcgc gcgccacttg ccagccgccg
     1801 aggttgccgc tcgcggtgtt gcgccacaga tggctcgaga agcgcgtccc tgcggtcgcg
     1861 atctcgtccg ccagacgcat caccgtgtcg gccgggatcc ggcattcctc ggcgacgaat
     1921 tcgggcgtga aagcggcgta ttgctcctcg aggaactcga cgaaacgtgc gaacgtcccc
     1981 gccccctgcg gatcgagcgc gcccagcgtc tcctgccagt tcacccagcg ctgcacgaac
     2041 gcctggttcc acgttccccg gcgcagcagc tcccgcgcca cgccgagcag gagcgcccct
     2101 tccgaccccg gccacggcgc gatccacaga tcggcatgcg acgccgtgtt gctgaggcgc
     2161 gtgtccacga cggcgagccg cgcgcctgct tgcttggcgt ccatgatgcg ttgcgcgtgc
     2221 ggattgaagt agtggccggt ttcgagatgc gacgagagca gcaggatcgt ctcggcattc
     2281 gcgtaatccg gcgacggccg atcgttgccg caccacagga agtggccgag gcgcgccgat
     2341 gacgagcaca cgttcgtgtg gctgttgtga ccgtcgatgc cccatgattg cagcacgcgg
     2401 ttggcgtagc cgtcctcgcc cggccggccc acgtgataca tgatctcgtg gcgccggtct
     2461 tcgacgatcg cggcgcggat gcgcgcgccg atctcgtcga gcgcgtcgtt ccacgacacc
     2521 tggcgccact tgcccgatcc gcgagcgccg tcgcgtttga gcggatacag aatgcgatcc
     2581 ggatcgtcga gctgattcgg cgtgaccacg cccttcgcgc acgtgcggcc gcggctgccg
     2641 ggatggagcg ggttgccctc gatcttccgc accgtcaagg cgtccttgtc gacgtaggcg
     2701 agaatgccgc aggccgattc gcagttgaag cagatgctcg gaatgatcca gtagtgccgg
     2761 cgatccttct tcgaccagct cgtcgactcg tagtcgacgt agtcgtccca ctgtgccggg
     2821 tcggggtgcg agcggaactc agggctcatg acaacggcac acattgcccc gcttcgaccc
     2881 acacgtattc ccaggcgaag ctgctggcga gcgcgaggac ggcggacgcc gcgagcgcga
     2941 tcggcacgtg cgtggacagg gcggtgaaga cgatgacggc cgcggcggcg gcgatggcgc
     3001 cgaaccagaa gagccgcgca tacggtccgc ggcggatggc gtcggcggcg agcgcgtggt
     3061 gccgcgtcgg gctcttccgg acgacgtgtt ctccgacgag caacgcgacg tggaccagca
     3121 tcgcaccgac cagagtccag gcgagcgcgc gcccgaagcc ggcgtcggtc agcccaggca
     3181 ggaaggccgc gagaatgagg agcacggcgg cgccttcggc gatggcctgg gcgagcaaat
     3241 cgatggtggc gatcgggccc tgccacagat cgcgcgcgcg ggcctgcgcg aagagaaagc
     3301 cggtgtagca cgtcgtcagc acggacgcga tcgcgagggg ccacaagatg atcggcagca
     3361 cggatccgaa tcccatcgcc cgcgccgcca gccacatcgt cgtcagcgcg ccctgcgcgg
     3421 tgaggaaata ggcgccccac acgagccacg accgccagtt ggggcggacc aggatgtagt
     3481 agaagcgctc cggacgctcg agatcggcga ccaggatcac ggcggtcgcg atcaggaaca
     3541 ccagcgagat ggcgggtccc gcagtgagtg ccagcggcgg gcgatcgccg tacagcagcg
     3601 gcagcagcag gctgacgagc atcgtgcctg tggcgatccc tttcgcgaga aggtacagcg
     3661 ccatgtcgaa gccccagggg ttgacgtggg gcgtgtcgta gtcgacacgg gcatcgcccg
     3721 gcgtcgccgc ggagggcgat ggcgagccca gcggccgcag cagcacctgg ccttccttgt
     3781 agatgaacgg gcgcacggcg agttccggct ggatcgtgac cggtgcggcg ccgaggtaga
     3841 acaccttcgg gatcgtgttc ttctccggct tgcgcacgtc gacgccattg aggtgcgcga
     3901 tgcgcgccac ttcactcgcc ggatcgtcga gatcgccgaa gatgcggcac tcggtcgggc
     3961 agacgctgac gcacgcgggc agcagctggt tctcgacgcg gttcgcgcag aaattgcatt
     4021 tctcg
//
LOCUS       DASSYW010000090         2154 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1803384, whole genome shotgun sequence.
ACCESSION   DASSYW010000090 DASSYW010000000
VERSION     DASSYW010000090.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2154)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2154)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2154
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1803384"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..811)
                     /locus_tag="VFN38_01470"
     CDS             complement(<1..811)
                     /locus_tag="VFN38_01470"
                     /inference="COORDINATES: protein motif:HMM:NF014896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010447.1"
                     /translation="MLFRFRSLAVAALVAAAPAAAQVATQPGALTYPATRTVDVTDRF
                     GAVTVADPYRWLEELNAPETAQWVAAQNAVTDAYLATLPMRAPLAARITELWNYPKVS
                     APRWQGGRWYYSRNSGLQRQSVMYSRAALDGPEQVVLDPNKLSPDGSIALAGFVPSPD
                     GRWVAYGQSEGGSDWSTWLVRDLRTSRATGDTVRWVKFSGISWTHDGRGFFYGRYPEP
                     AAGEKLRGALRDKKIYYHAIGTSQAEDRLIYHRPEEPTLFIGAGLDETGRYL"
     gene            914..>2154
                     /locus_tag="VFN38_01475"
     CDS             914..>2154
                     /locus_tag="VFN38_01475"
                     /inference="COORDINATES: protein motif:HMM:NF019307.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HET9010448.1"
                     /translation="MNILTRTTLAALLVLAPHALPAQRGTPFRAAIDGYRRSHEAEIL
                     REFRDLLAIPNLASDSANIRRNADAIIAMLQRRGVATRLLESPAGGPPAVYGELRTPG
                     ATRTIVLYAHYDGQPVEPAKWATPPWEPTLRDGPLERGGRVVPLPTTNGTTGPEWRLY
                     ARSASDDKAPIVAMLVALDALRAAGRSPSVNLKFYFDGEEEAGNPRTRALLVRHAALL
                     ASDGWVFADGPVHQSRRHQVVFGVRGMTDVVITAYGATRVLHSGHYGNWAPNPAAVLA
                     NFIASLRDTEGRILVPGYHDDVRKLTVAGLRALRTVPNVDEALRRELGLASTEARNAV
                     LAERIMQPALNVRSLHAGPMGTAPNAIPTEATASIDLRLVPDQRPERIRTLIEGYARK
                     QGYTVLHAAPDSAMRAGHGRLL"
BASE COUNT          316 a          777 c          785 g          276 t
ORIGIN      
        1 tgaggtagcg ccccgtctcg tcgagtcccg cgccgatgaa cagcgtcggt tcctcggggc
       61 gatggtagat cagccggtcc tcggcctgac tggtgccgat cgcgtggtag tagatcttct
      121 tgtcgcggag cgcgccgcga agcttctcgc ccgcggcggg ctccgggtag cgcccgtaga
      181 agaagccgcg gccgtcgtgg gtccaggaga tgccggagaa cttcacccag cgcacggtgt
      241 cgccagtggc gcggctggtc cggaggtcgc gcacgagcca ggtgctccag tcggagcctc
      301 cttcgctctg accgtaggcg acccagcgcc cgtcgggcga ggggacgaag ccggcgaggg
      361 cgatggaacc gtcgggcgag agcttgttcg ggtcgagcac cacctgctcc ggcccgtcga
      421 gcgcggcgcg cgagtacatg acgctctgcc gctgcagccc ggagttgcgc gagtagtacc
      481 agcggccgcc ctgccagcgc ggcgcgctga ccttggggta gttccacagc tcggtgatgc
      541 gcgccgccag cggtgcgcgc atgggcaaag tggccaggta cgcatcggtc accgcgttct
      601 gggccgctac ccactgcgcg gtctccgggg cgttgagctc ctcgagccag cggtacggat
      661 cggccaccgt gacggcgccg aagcggtcgg tgacgtcgac ggtgcgcgtg gcgggatagg
      721 tgagcgcacc cggctgggtc gccacctggg cggcggccgg agcggccgcc acgagcgcgg
      781 cgaccgcgag cgaacgaaag cggaacagca tcggaaatcc tcggcgaggg aatccgagcg
      841 aacgtagcgc gagggtacgg tggcggccag cacaccctgt cccactccgc gacccccgcg
      901 cacctttcca tacatgaaca tcctgacccg cacgacgctc gcggcgctcc tcgtcctcgc
      961 gccgcatgcg ctgcctgccc agcgcggcac gcccttccgc gccgccatcg acggataccg
     1021 ccgcagccac gaggccgaga tcctgcgcga gttccgcgac ctgctcgcga ttccgaacct
     1081 cgcgagcgac agcgccaaca tccggcgcaa cgccgacgcg atcatcgcga tgctccagcg
     1141 gcgtggcgtc gcgacgcggc tgctcgagtc gcccgccggg gggccgcccg ccgtgtacgg
     1201 cgagctgcgc acgccgggcg ccacgcgcac gatcgtgctg tacgcacact acgatggcca
     1261 accggtggag ccggcgaagt gggccacgcc gccgtgggag ccgacgctgc gcgacgggcc
     1321 cctcgagcgg ggcgggcgcg tcgtcccgct tccgaccacc aacggcacca ccggcccgga
     1381 gtggcggctg tacgcccggt cggcgagcga cgacaaggcg ccgatcgtcg cgatgctcgt
     1441 cgcgctggac gccctgcgcg ccgcgggaag gtcgccgagc gtgaacctca agttctactt
     1501 cgacggcgag gaggaggcgg ggaacccccg cacccgcgcg ctgctggtgc ggcacgcggc
     1561 gctgctggcg agcgacggct gggtgttcgc cgacgggccg gtgcaccaga gccggcgcca
     1621 ccaggtggtg ttcggcgtgc gcggcatgac cgacgtcgtg atcacggcat acggcgcgac
     1681 gcgcgtgctc cacagtggcc actatggcaa ctgggcgccg aacccggccg cggtgctggc
     1741 gaacttcatc gcgtcgctgc gcgacaccga gggcaggatc ctcgtgcccg gctaccacga
     1801 cgacgtccgt aagctcaccg tggccggcct ccgcgcgctg cgcaccgtgc cgaacgtgga
     1861 cgaggcgctg cgccgcgagc tcgggctcgc gtccaccgag gcgaggaacg cggtgctggc
     1921 cgagcggatc atgcagccgg cgctcaacgt gcggtcgctg cacgccggcc cgatgggcac
     1981 ggcgcccaac gccatcccca ccgaggcgac ggcgtcgatc gacctccggc tcgtgcccga
     2041 ccagcgcccc gagcgcattc gcaccctgat cgaagggtac gcgaggaagc agggctacac
     2101 ggtgctgcac gccgcgcccg acagcgcgat gcgggcgggc cacggcaggc tgct
//
LOCUS       DASSYW010000091         2631 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1361308, whole genome shotgun sequence.
ACCESSION   DASSYW010000091 DASSYW010000000
VERSION     DASSYW010000091.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2631)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2631)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2631
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1361308"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(136..996)
                     /locus_tag="VFN38_01480"
     CDS             complement(136..996)
                     /locus_tag="VFN38_01480"
                     /inference="COORDINATES: protein motif:HMM:NF042511.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6544 family protein"
                     /protein_id="HET9010449.1"
                     /translation="MARVIRTTALVAGGLAAGVGATMVAGARTWNRRTERLVARLWEI
                     ATAPDRGDAFAPFDVRQLEGLPAPVVRYFTFALTPGQRAIRRAHLRFDGTFAAKPDAW
                     APFTADQHVSARPPGFVWDARIAMMPVVPVRVRDSYVGGEGSMRAAVASVVSMIDQHG
                     TKEIAAAALQRFLAEAVWLPTALLPRDGLVWSPIDDANARVTLTDGATTVSLDVHFAS
                     TGEVESISTMRYRDVNGTPVLTPWVGHHTDYVRMDGMMIPTRGEVAWGMPEGPVPYWR
                     GRIVEARFDW"
     gene            complement(1058..2032)
                     /locus_tag="VFN38_01485"
     CDS             complement(1058..2032)
                     /locus_tag="VFN38_01485"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HET9010450.1"
                     /translation="MSRTLEVELIASISTISPLGGAIVVATDGTHDSDGAVRVGIAIG
                     RRDGVNAALLSVVEPFAFMEPETGSRTEAERLTRLAIEAREGELAAQRNRTHPGRKAW
                     PFTIHVGHRIDEIVSYAEHHASALIVLGLGSHGAIARLLQRETALRVIRAARTPVLAV
                     PADAWGVPHSAIVAIDFSPPSEEAARAALGLLGGEGTLYLTHVTPRIAIPQGDSRPWG
                     EPAVTEVLGRLEELARRLDPPPGVAVEFVSLCGEPAQELVAFAEQHRVDMVATGAHGR
                     SRLGRLVLGSVSTKVVRSAHCWVLVVPNRAVQVEEAEPADAPNAPSVA"
     gene            2312..>2631
                     /locus_tag="VFN38_01490"
     CDS             2312..>2631
                     /locus_tag="VFN38_01490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010451.1"
                     /translation="MIAFESRRDRAQLLIVVLGVVIAYAVLPLASGLLGALVLHVAVA
                     PVHRRLASVMPRRIAAVLVVVATALLILLPVGWLVAVAIDTAPDAIRQVTSNPLLGRL
                     SAVR"
BASE COUNT          378 a          920 c          946 g          387 t
ORIGIN      
        1 ccggatacac cgaccccgtg aacccgtgac tcacgaggtt cagcgtgatc tgatggccga
       61 tgtgatgagg cgaccgagac gcgccgatga cggcgacggt gcgcggtttg aggatcgcat
      121 cgagcgaagc gacgttcacc agtcgaatct cgcctcgacg atccggccgc gccaataggg
      181 aaccgggccc tccggcatcc cccaggcgac ttcgccccgc gtggggatca tcatgccgtc
      241 catgcggacg tagtccgtgt ggtggccgac ccacggcgtg agcaccggtg tgccgttcac
      301 gtcgcggtag cgcatcgtcg agatcgactc gacctcgccg gtcgatgcga agtgcacgtc
      361 cagggacacc gtggttgcgc cgtcggtgag cgtcacgcgc gcgttcgcgt cgtcgatcgg
      421 cgaccagacg agtccatccc tcggcagcag cgccgttggc agccacaccg cctcggcgag
      481 aaagcgctgg agcgccgccg ccgcgatctc cttcgtcccg tgctgatcga tcatcgagac
      541 gaccgacgca acggcggcgc gcatcgaccc ttcaccgccg acgtagctgt cgcgcacgcg
      601 aacgggcacg accggcatca tcgcgatgcg ggcgtcccac acgaagccgg gcgggcgcgc
      661 gctgacgtgc tgatcggcgg tgaacggcgc ccaggcgtcg ggcttcgccg cgaaggtacc
      721 gtcgaagcgc aggtgtgcgc ggcggatcgc gcgctgtccg ggcgtgagcg cgaaggtgaa
      781 gtagcgaacg acgggagccg gcagcccctc gagctgccta acgtcaaatg gggcgaacgc
      841 gtcgccgcga tcaggcgcgg tggcgatctc ccacagccgg gcgacgagcc gctcggttcg
      901 gcggttccac gtgcgcgcgc cggcgaccat cgtcgcgccg acgccggcgg cgagtcctcc
      961 cgccaccagg gcggtcgtgc ggatcactct ggccacggtg cactccagct ggtgtcgggg
     1021 cccgcggcca gcgggccccg tggatgcgcg gtgatcgtca ggcgacggac ggcgcgttag
     1081 gcgcgtccgc gggctcggcc tcctccacct ggaccgcgcg gttcggcacg acgagcaccc
     1141 agcagtgcgc cgagcgcacg accttcgtcg acacgctgcc gagcacgaga cgaccgagcc
     1201 gcgagcgccc gtgcgcgccg gtggcgacca tgtcgacgcg atgctgctcg gcgaacgcga
     1261 cgagctcctg cgcgggctcg ccgcacagcg acacgaactc gaccgccacg ccgggcggag
     1321 ggtcgagccg ccgcgccagc tcctcgaggc gaccgagcac ttccgtcacg gctggctcgc
     1381 cccagggacg cgagtcgccc tgcgggatcg cgatgcgcgg cgtgacgtgc gtgaggtaca
     1441 gcgtgccttc gccgccgagg agaccgagcg cggctcgcgc ggcctcctcg ctcgggggcg
     1501 agaagtcgat cgcgacgatc gcgctgtgcg gcacgcccca ggcgtccgcc ggcaccgcga
     1561 gcaccggcgt acgcgccgcg cggatgacgc gcagcgcggt ctcgcgctgc aacagccgag
     1621 cgatcgctcc gtgcgacccg agcccgagca cgatcaaggc ggaggcgtga tgctcggcgt
     1681 acgagacgat ctcgtcgatg cggtgtccga cgtggatggt gaacggccac gccttgcgcc
     1741 ccggatgagt gcggttgcgc tgtgcggcga gctcaccctc gcgcgcctcg atggcgagcc
     1801 gcgtcaggcg ctcggcctca gtccgcgatc cggtctcggg ctccatgaac gcgaacggct
     1861 cgaccacgct cagcagcgcc gcgttcacgc cgtcccgccg tccgatggcg atgccgaccc
     1921 ggaccgcgcc atcggagtcg tgcgtgccat ccgtcgccac gacgatcgcg ccgcctaacg
     1981 ggctgatggt cgagatggac gcgatcagtt cgacttccag cgtgcgagac attgtagacc
     2041 tccggaaacc gtcggccgtg ccgccgccgt catctcgatt gccatgccct gaccaggcgg
     2101 acgtgcctgc cggggttatg ccaatgtgct cggggtgcag ccgacagcct atcggggccg
     2161 caccgaacgc gcgtcgggga atcgggaggg agtcgtatgt gggtttccct acgagggtcc
     2221 atgacgtgcc cgacgccgtt cgccgtgccg gcgacacagc gtgaagcatg aggtcatccg
     2281 tcgtgcgacg tcgagctacc gaggagttgc cgtgatcgcg ttcgagtcgc ggcgcgaccg
     2341 cgcgcagctg ctgatcgtgg tgctcggcgt cgtcatcgcg tacgccgtgc tgccgctcgc
     2401 atcggggctg ctcggggcgt tggtgctgca cgtggcggtt gcgcccgtgc atcgtcggct
     2461 cgcgtcggtg atgccgcgcc gcatcgctgc ggtgctcgtc gtcgtcgcca cggcgttgct
     2521 cattctcctg ccggtgggat ggctggtggc ggtggcgatc gacactgcgc cggacgcgat
     2581 ccggcaagtg accagcaacc cgctgctcgg caggctctcg gcggtgcgga t
//
LOCUS       DASSYW010000092         2695 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_624096, whole genome shotgun sequence.
ACCESSION   DASSYW010000092 DASSYW010000000
VERSION     DASSYW010000092.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2695)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2695)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2695
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_624096"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..331)
                     /locus_tag="VFN38_01495"
     CDS             complement(<1..331)
                     /locus_tag="VFN38_01495"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HET9010452.1"
                     /translation="MTRIGPRRFARHVERLAARGWRTLSLAELAACARGERGVGEREI
                     AFTFDDAYRGLREHAFPVLRAHGFGALCFAITDYAGRLNRWDVAYGGRRFAHLSWRDM
                     RRWQERGI"
     gene            complement(438..881)
                     /gene="dut"
                     /locus_tag="VFN38_01500"
     CDS             complement(438..881)
                     /gene="dut"
                     /locus_tag="VFN38_01500"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: protein motif:HMM:NF001862.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004170 - dUTP diphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006226 - dUMP biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0046081 - dUTP catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HET9010453.1"
                     /translation="MTGEVRVRRLPHNPDLPLPARQTSGSAGYDVASAEPDFVLGVGE
                     RRAVRTGLAFELPAGLEMQVRPRSGLALRHGVMLPNAPGTIDPDYRGELLVIMLNMGG
                     APVPIARGERIAQLVFARFDAPRLAEVSDLEETERGSGGFGSTGR"
     gene            complement(878..2011)
                     /gene="ald"
                     /locus_tag="VFN38_01505"
     CDS             complement(878..2011)
                     /gene="ald"
                     /locus_tag="VFN38_01505"
                     /EC_number="1.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000286 - alanine dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006522 - alanine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine dehydrogenase"
                     /protein_id="HET9010454.1"
                     /translation="MKIGVPKEIKTNENRIALVPAGAEALVAAGHSVQVEKGAGEGSG
                     FSDELYLAAGATIAPDAATVWKNADMIMKVKEPIEREWPHMRRGQTIFTYFHFAADEK
                     LTRAHMDSGATCIAYETVELPSRELPLLTPMSEVAGRMAVQEGAKYLEKLYGGRGVLL
                     GGVPGVAPAKVVVLGGGIVGINAAKIAAGMGAAVVVVDISLERLRYLSDVMPANVQLI
                     HSNRHNILEQIEVADLVVGAVLIPGAKAPKLVRREDLKRMRPGAVIVDVAIDQGGCIE
                     TIKATTHENPTYVIDGIIHYGVANMPGGVPRTSTLALTNATLPYALQLANKGWRRAVR
                     ENAALLKGVNVVDGKVTYPAVAETFGMEHTPVADFLEQPAGVA"
     gene            complement(2144..>2695)
                     /locus_tag="VFN38_01510"
     CDS             complement(2144..>2695)
                     /locus_tag="VFN38_01510"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HET9010455.1"
                     /translation="RHVERDAVQTHVVFGSPTVRHGDPRRYAMALVSMQLGGGMSSRL
                     FQRVREELGLAYSVYTFQSFHVDAGMHGVYVATAPETAKQAAAAIGEELAKLAAEGLP
                     ADELEAGKSQLKGQITLSLESVTSRMYRAAGVELYDEPYRPLDEVLALVDAIDEDTVR
                     AVCAEFFAPEAQTVLSLGPEAAR"
BASE COUNT          362 a          983 c          952 g          398 t
ORIGIN      
        1 cgatcccccg ctcctgccag cgccgcatgt cgcgccacga gaggtgcgcg aagcggcgcc
       61 ctccgtacgc gacgtcccag cggttcagcc gccccgcgta gtcggtgatc gcgaagcaga
      121 gggcgccgaa gccgtgggcc cggagcaccg gaaaggcgtg ctcgcggagg ccgcggtagg
      181 cgtcgtcgaa ggtgaaggcg atctcccgct cccccacccc gcgctcgccg cgcgcgcagg
      241 ccgcgagctc ggcgagcgac agcgtgcgcc agccgcgcgc cgccagccgc tcgacgtggc
      301 gcgcgaagcg gcgggggccg atgcgcgtca cgccgagctc gtggcgactc tccaccttgt
      361 ggtagcagtg aatgggcggc aggggcgtcg ttccggcacg cggcgaggat ccgcgcgtcc
      421 cgctgccccc ggccgcgtca gcggcccgtg ctgccgaacc cgccgctgcc acgttcggtc
      481 tcctcgagat cggacacctc cgcgaggcgg ggcgcgtcga agcgcgcgaa gacgagctgc
      541 gcgatgcgct ccccgcgcgc gatcggcacc ggcgccccgc ccatgttcag catgatgacg
      601 aggagctcgc cccggtagtc gggatcgatc gtcccgggcg cgttcggcag catcacgccg
      661 tgccgcagcg cgagccccga gcgcggacgc acctgcatct cgagcccggc ggggagctcg
      721 aaggcgaggc ccgtacggac cgcgcgccgc tcacccacgc cgagcacgaa gtccggctcc
      781 gccgaggcta cgtcgtagcc cgcggagccg gaggtctgac gtgccggcag gggtaggtcg
      841 gggttgtgcg gaagacggcg aacccggacc tcccccgtca cgcgacgccg gcgggctgct
      901 cgaggaagtc ggcgaccggc gtgtgctcca tgccgaaggt ctcggcgacc gccgggtacg
      961 tcaccttccc gtccaccacg ttgaccccct tgaggagggc cgcgttctcg cgcacggcgc
     1021 gccgccagcc cttgttcgcc agctgcagcg cgtacggcag cgtggcgttg gtgagcgcca
     1081 gcgtcgaggt gcggggcacg ccaccgggca tgttggcgac gccgtagtgg atgatcccgt
     1141 cgatgacgta ggtcgggttc tcgtgcgtcg tcgccttgat cgtctcgatg cagcccccct
     1201 ggtcgatggc gacgtcgacg atcaccgcgc ccggccgcat gcgcttgaga tcctcgcgcc
     1261 ggaccagctt gggcgccttc gcgccgggga tgagcaccgc tccgacgacg aggtcggcga
     1321 cctcgatctg ctcgaggatg ttgtggcggt tggagtggat cagctgcacg ttcgccggca
     1381 tgacgtccga caggtagcgc aggcgctcga gcgagatgtc gacgacgacc accgcggcgc
     1441 ccatgccggc ggcgatcttc gccgcgttga tgccgacgat gccgccgccc aggaccacca
     1501 ccttcgccgg cgccacgccc gggacgccgc ccagcagcac gccgcggccg ccgtagagct
     1561 tctcgaggta cttggcgccc tcctggaccg ccatccggcc ggcgacctcc gacatcggcg
     1621 tgaggagcgg gagctcgcgc gacggcagct ccacggtctc gtaggcgatg caggtcgcgc
     1681 cgctgtccat gtgggcgcgc gtcagcttct cgtcggcggc gaagtggaag taggtgaaga
     1741 tcgtctgccc gcggcgcatg tgcggccact cgcgctcgat cggctccttc accttcatga
     1801 tcatgtcggc gttcttccag acggtcgccg cgtcgggggc gatcgtcgcg ccggccgcca
     1861 ggtacagctc gtcggagaac ccgcttccct caccggcccc cttctcgacc tgcacgctgt
     1921 ggcccgccgc gaccagcgcc tccgctccgg cggggacgag cgcgatgcgg ttctcgttgg
     1981 tcttgatctc tttcgggacg ccgatcttca tgggaagcga tgtgtgattt gtgaatggcg
     2041 atgagtgatc gacggcggcg tttccgtcgt tcgatgcgat ccggacggcg ctcgcgcacc
     2101 gtccggaccg cactaaacac taaacggtga tcgcgtcgcg cgcctaccgc gccgcttccg
     2161 gccccaggct gagcaccgtc tgcgcctcgg gcgcgaagaa ctcggcgcag accgcccgca
     2221 ccgtgtcctc gtcgatcgcg tccaccaggg cgagcacctc gtcgagggga cggtatggct
     2281 cgtcgtacag ctccaccccc gccgcgcggt acatgcgcga cgtcacgctc tccagggaga
     2341 gggtgatctg ccccttgagc tggctcttgc cggcctccag ctcgtcggcc gggagcccct
     2401 cggcggccag cttcgcgagc tcctcgccga tcgccgccgc ggcctgcttc gccgtctccg
     2461 gcgccgtggc gacgtagacg ccgtgcatcc ccgcgtccac gtggaacgac tggaaggtgt
     2521 agacggagta ggcgaggccg agctcctcgc gcacccgctg gaagagccgc gagctcatcc
     2581 cgccgccgag ctgcatgctg acgagcgcca tcgcgtagcg gcgcgggtcg ccgtgccgga
     2641 cggtcggcga gccgaagacg acgtgggtct ggaccgcgtc gcgctccacg tggcg
//
LOCUS       DASSYW010000093         2263 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_808373, whole genome shotgun sequence.
ACCESSION   DASSYW010000093 DASSYW010000000
VERSION     DASSYW010000093.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2263)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2263)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2263
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_808373"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(160..552)
                     /locus_tag="VFN38_01515"
     CDS             complement(160..552)
                     /locus_tag="VFN38_01515"
                     /inference="COORDINATES: protein motif:HMM:NF016149.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper resistance CopC family protein"
                     /protein_id="HET9010456.1"
                     /translation="MLTSHARRLSALADLAAIVASLTAWRTPFFHLHLLKSVPEANAT
                     VPAAPDSIRLWFSQVPELKLTTIKVTGPGNAAVPLTPLASRDSTALVVGVKAKMSSGA
                     YTVRWRTMARDGHVAGGSFAFTVAPVRR"
     gene            complement(659..1576)
                     /locus_tag="VFN38_01520"
     CDS             complement(659..1576)
                     /locus_tag="VFN38_01520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4097 family beta strand repeat-containing
                     protein"
                     /protein_id="HET9010457.1"
                     /translation="MMHSRFPHRSRVAIAAVAAAVSPIVACAQQTDTTIAVQPNARVQ
                     IQNFAGSIRVVAWDRNAVRVHAGQSRRDEVRVQGGEAALSIVTVNKSGVPAPLDYEIT
                     VPVRASLDISGTYTDITIEGVRGSVSATTVQGGVSLRGGDGVISLKSVEGAVTAQDAT
                     GRIEVNGVNKGLVLRNVNGDIAAETVNGSIELDGIESSDVDAETVNGRVTYVGSIRDR
                     GRYRFGSHNGTITISIPERSNATVAAMSYQGTFSSRFELPKMIADGSARVSGRANFAL
                     GTGSARIEAESFQGDIILARPGDPAIRPR"
     gene            complement(1573..>2263)
                     /locus_tag="VFN38_01525"
     CDS             complement(1573..>2263)
                     /locus_tag="VFN38_01525"
                     /inference="COORDINATES: protein motif:HMM:NF024881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HET9010458.1"
                     /translation="MPNDHFDAMTDRWTDRLSEYVDGELDAPTRQALETHLATCASCR
                     ATRDALERVVARARRVGYHEPAQDLWTAIERTIGQESPRRRRPRLVTVSLSRLMVAAA
                     LVAVVAGGFAWTIASRRVASSAVAVVRDTVTPPLAALGSGSALAVASYRDAAADLERA
                     FQAGRGTLRPETTRVIEENLRAIDIAIAQADSALRRDPGSAYLNQYLATTMQRKLKLL
                     RRAVEITTARS"
BASE COUNT          335 a          770 c          804 g          354 t
ORIGIN      
        1 gatcgcgtcg ctcgtgcgcc tgacgcgtcc cgcgggttgc ctggtccacg tctggaccgt
       61 gaacgacgcg ccggccgcca agcggctgtg gcgagtcggc gtgcgcggca tcgtgtccga
      121 cgatcccggc ctcatccgcc gtacgcgcga cgccgccgcc taacgccgaa ccggcgcgac
      181 ggtgaacgcg aagctgccgc ccgcgacgtg gccgtcgcgg gccatggtac gccatctcac
      241 ggtgtaggcg ccgctcgaca tcttcgcctt cacgccgacg acgagcgcgg tcgagtcgcg
      301 gctcgcgagc ggagtcagcg ggaccgcggc gttgccgggg ccggtcacct tgatcgtggt
      361 cagcttgagc tcgggaacct gcgagaacca gaggcgaatc gaatccggcg cggccgggac
      421 ggtcgcgttg gcctcgggga cggacttgag caggtgcagg tgaaagaacg gcgtacgcca
      481 cgccgtgagg ctggccacga tcgcggcgag atccgcgagg gcggaaaggc ggcgcgcgtg
      541 tgacgtgagc acgaaatgca tcgggtatgg gtctgcgatt cgggtgttgc agaaaaccta
      601 gcgggtggcg cgcggagccg ctccgccatt gttcaccctg gccgatcacc cgcgtcgatc
      661 accgcggtcg aatcgcggga tctcccggcc tcgcgaggat gatgtctccc tggaaggact
      721 ccgcctcgat ccgggcactt ccggttccga gcgcgaagtt cgcgcgtccg gatacgcgcg
      781 cggatccgtc ggcgatcatc ttcggcagct cgaaccggct cgagaacgtc ccctgatagc
      841 tcatcgccgc gacggtcgcg ttcgaccgct cggggatcga gatcgtgatg gtcccgttgt
      901 ggcttccgaa ccggtagcgc ccgcggtcac gaatgctccc gacgtacgtc acgcgaccgt
      961 tcaccgtctc ggcatcgacg tccgacgatt cgatgccgtc cagctcgatg gagccgttca
     1021 ccgtttcggc cgcgatgtcg ccgttcacgt tccggagcac gagccccttg ttgacgccgt
     1081 tcacctcgat gcggcccgtc gcatcctgcg cggtgacggc gccctcgacc gatttgaggg
     1141 agatcacgcc gtcgccgcct cgaagcgaca cgccgccctg caccgtcgtg gcactcaccg
     1201 agccgcggac gccctcgatc gtgatgtccg tgtacgtgcc actgatgtcg agcgacgcgc
     1261 ggacaggcac cgtgatctcg tagtcgagtg gcgccggcac gccggacttg ttcaccgtca
     1321 cgatggagag tgcggcctcg cctccctgca cgcgcacctc gtcgcggcga ctctggcccg
     1381 catgcacgcg caccgcgttg cggtcccagg cgacgacgcg gatcgagccg gcgaagttct
     1441 ggatctggac gcgcgcgtta ggctgcacgg cgatggtcgt gtcggtctgc tgggcgcagg
     1501 cgacgatggg cgagacggcc gcagcgaccg ccgcgatcgc gacccgggag cggtgcggga
     1561 aacgggagtg catcatgagc gcgccgtcgt gatctccacg gcacggcgaa gcagcttgag
     1621 ctttcgctgc attgtcgtcg cgagatactg attgaggtac gcactgccgg ggtcgcgccg
     1681 gagcgcgctg tccgcctgcg cgatcgcgat atcgatcgcg cgcaggttct cctcgatgac
     1741 gcgcgtcgtc tccggccgga gcgtgcctcg ccctgcctgg aatgcccgct cgagatcggc
     1801 ggcggcgtcg cgatacgacg cgaccgcgag cgcggacccg ctgcccaatg ctgcgagggg
     1861 cggcgtgacc gtgtctcgca cgacggcgac ggcggacgat gcgacgcgac gcgacgcgat
     1921 cgtccacgcg aagccgccgg cgacgaccgc gacgagcgcc gctgccacca tgagtcgcga
     1981 gagcgagacc gtgacgagcc gagggcgacg acggcgtggc gattcctgcc cgatggttcg
     2041 ctcgatcgca gtccagagat cctgcgcagg ctcgtggtac cccacgcgac gcgcgcgggc
     2101 gacgacacgc tcgagcgcgt cgcgcgtcgc gcggcagctc gcgcaggtcg cgaggtgcgt
     2161 ctcgagcgcc tgacgagtcg gcgcatcgag ctcgccgtcg acgtactcgg acagacggtc
     2221 ggtccagcgg tcggtcatgg cgtcgaagtg gtcgttaggc atc
//
LOCUS       DASSYW010000094         2215 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_642782, whole genome shotgun sequence.
ACCESSION   DASSYW010000094 DASSYW010000000
VERSION     DASSYW010000094.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2215)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2215)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2215
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_642782"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..230
                     /locus_tag="VFN38_01530"
     CDS             <1..230
                     /locus_tag="VFN38_01530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010459.1"
                     /translation="WFVVRDRGVPGLYGRYVYGDYCNPKLLSARLSSGRASGNRAIGL
                     SVSALSSFGQDARGRVYALSLSGPVYRFAAR"
     gene            319..738
                     /locus_tag="VFN38_01535"
     CDS             319..738
                     /locus_tag="VFN38_01535"
                     /inference="COORDINATES: protein motif:HMM:NF014132.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCP2 sterol-binding domain-containing protein"
                     /protein_id="HET9010460.1"
                     /translation="MPYFKDDAEVYRFIGRLFEDLAEDEELSPKFRRANTVVQYQYRN
                     PESQVTVDLRQDSDGRVDCGESDLEPEVIMSMEADTAHRFWLGGVNVTVALARGQMKA
                     KGPVAKILKLVPLVKPVFPRYRKLLEDAGRSDLAGVG"
     gene            743..1933
                     /locus_tag="VFN38_01540"
     CDS             743..1933
                     /locus_tag="VFN38_01540"
                     /EC_number="1.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF012678.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing alcohol dehydrogenase"
                     /protein_id="HET9010461.1"
                     /translation="MPARRFPDFGQYLAPTRVVLGRGLIEGVGFEFAKEGAKRPLIVT
                     DAVIRGTGLVDRVQEGLTGGDLETAGVFDDVPQDSGVEVVVACAELAKESGADSILAV
                     GGGSVMDTAKVANVLVAHGGAVQDYEGIYALPREDEGLGKPLPVPPLACIPTTAGTGS
                     ENSMAAVVKDHEAGVKLEFADFPLFPRMAILDPASTETLPAAIAAATGMDAMTHAIES
                     YVSPDTGALDQASALHALRLIRDNFERAVLEGDEDARGNMLVAAALAISVNLGATHSM
                     SHPCGGRYGVAHGVANSINLPHVIRFNARGGEEIADGYRDIAEVLAVDARGGDAEVGD
                     ALAAHITELTRSLGLPQRLSEVGVPEAGIPELVEGAMGDGCTLVNPREPSEEDFAELY
                     AAAL"
     gene            complement(1946..>2215)
                     /locus_tag="VFN38_01545"
     CDS             complement(1946..>2215)
                     /locus_tag="VFN38_01545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010462.1"
                     /translation="GTLGMSDIADALGWYSVPVPELGLQATAEIVNRVPGLPEAAAWI
                     NAARKPVLMKTERAKKELGWDPQHTARSTLKQLVEAYRTEERVGH"
BASE COUNT          301 a          770 c          824 g          320 t
ORIGIN      
        1 gctggttcgt ggtccgcgac cggggcgtgc ccggcctcta cggccgctac gtgtacggcg
       61 actactgcaa cccgaagctg ctctccgcga ggctgagcag cggcagggcc agcgggaacc
      121 gcgccatcgg gctgtcggtg agcgcgctgt cctccttcgg tcaggacgcg cgcggccggg
      181 tctacgcgct gtcgctctcc gggccggtgt accgcttcgc ggcccgctga gcagccgctc
      241 agtggcctta gagcgggcgt gggttgccgt ctgcccgcgg gacaggcatg atgccccttg
      301 cccgacagcg gaggactgtt gccgtacttc aaagacgatg ccgaggtgta ccggttcatc
      361 ggccggctct tcgaggacct tgccgaggac gaggagctct cgcccaagtt ccggcgcgcg
      421 aacacggtgg tgcagtacca gtaccgcaac cccgagtcgc aggtgacggt tgacctgcgg
      481 caggactccg acggcagggt cgactgcggc gagtccgacc tcgagcccga ggtgatcatg
      541 tcgatggagg ccgacaccgc gcaccgcttc tggctgggcg gcgtgaacgt gacggtcgcg
      601 ctggcgcgcg gccagatgaa ggccaagggc ccggtggcga agatcctcaa gctcgtgccg
      661 ctcgtgaagc cggtgttccc gcgctaccgc aagctgctcg aggacgccgg ccgctcggat
      721 ctggccggcg tcggctagcc acttgcccgc acgccgcttc cccgacttcg ggcagtacct
      781 cgcgcccacc cgcgtggtgc tcggccgcgg cctgatcgag ggcgtgggct tcgagttcgc
      841 caaggaggga gcgaagcggc cgctgatcgt caccgacgcc gtgattcgcg gcacggggct
      901 cgtggaccgg gtgcaggagg gtctcacggg cggcgacctc gagaccgcgg gcgtgttcga
      961 cgacgtgccc caggactcgg gcgtggaggt ggtggtggcg tgcgccgagc tcgcgaagga
     1021 gagcggcgcg gactcgatcc tcgcggtggg cggcggctcg gtgatggaca ccgccaaggt
     1081 ggccaacgtc ctggtcgccc acgggggcgc cgtccaggac tacgagggca tctacgcgct
     1141 gccgcgcgag gacgagggcc tcggcaagcc gctgccggtg ccgccgctcg cctgcatccc
     1201 caccaccgcc ggcacggggt cggagaactc gatggccgcc gtggtgaagg accacgaggc
     1261 gggcgtgaag ctcgagttcg ccgacttccc gctgttcccg cgcatggcga tcctcgatcc
     1321 ggcctcgacc gagacccttc ccgcggcgat cgccgccgcc accggcatgg acgcgatgac
     1381 ccatgccatc gagagctacg tgagccccga cacgggggcg ctcgaccagg cgtcggcgct
     1441 gcacgcgctc cgcctgatcc gcgacaactt cgagcgcgcg gtgctggagg gcgacgagga
     1501 cgcgcgcggc aacatgctcg tggccgcggc gctcgcgatc agcgtgaacc tcggagcgac
     1561 gcactcgatg tcgcacccgt gcggagggcg ctacggcgtc gcgcacggcg tggccaactc
     1621 gatcaacctg ccgcacgtga tccggttcaa cgcgcgcggc ggcgaggaga tcgcggacgg
     1681 ctaccgcgac atcgccgagg tgctcgccgt ggacgcgcgc ggcggggacg cggaggtggg
     1741 cgacgcgctg gcggcgcaca tcaccgagct cacgcgctcg ctcgggctgc cgcagcggct
     1801 gtccgaggtg ggcgtgcccg aggcgggcat tcccgagctc gtggagggcg cgatgggcga
     1861 cggctgcacg ctcgtgaacc cgcgtgagcc gtccgaggag gacttcgcgg agctgtacgc
     1921 cgccgcgctg tagcccccgt gcgcgctagt gcccgacgcg ctcctcggtg cggtacgcct
     1981 cgacgagctg cttgagcgtg gagcgcgccg tgtgctgggg atcccagccg agctccttct
     2041 tcgcgcgctc ggtcttcatc agcaccggct tgcgcgccgc gttgatccac gcggccgcct
     2101 cggggaggcc cggcacgcgg ttcacgatct cggcggtggc ctgcagcccc agctcgggca
     2161 cgggcaccga gtaccagccg agcgcgtcgg ctatgtcgct catgccgagc gtgcc
//
LOCUS       DASSYW010000095         3362 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1563505, whole genome shotgun sequence.
ACCESSION   DASSYW010000095 DASSYW010000000
VERSION     DASSYW010000095.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3362)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3362)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3362
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1563505"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(172..1365)
                     /locus_tag="VFN38_01550"
     CDS             complement(172..1365)
                     /locus_tag="VFN38_01550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homogentisate 1,2-dioxygenase"
                     /protein_id="HET9010463.1"
                     /translation="MPYYHTLGQIPRKRHIAFRKPDGGLYAEQLVGHEGFTGTSALLY
                     HVHPPTTVTSVKRLKETPLEADCDQTLRHRHFLTSRVKRGGSPTLDRVPLMFNQDVAM
                     LYVEPTKEDEHFYRNAQADEIVYVSKGAGMLETQYGDLPFGEGDYVVIHRGIMHRYRF
                     DAGSEQAKLLIMEGKGHTRPPTRYRNEYGQLIEGAPYSERDIRVPRTLRTFDEKGDFR
                     ILVKQYDGINEIILDHHPLDVVGWDGQFYPWAFNIRDFEPIVGRVHQPPPVHQTFQGD
                     GFVVCSFCPRPFDFHPEAIPAPYNHSNVDSDEVIYYASSEFMSRKGIEFGSITLHPDG
                     IPHGPHPGRAEASMKAKGTDEYAVMMDTFRPLKVAKQALDIEDPKYHRSWVDAQHEAF
                     NPPTT"
     gene            complement(1461..2600)
                     /gene="hppD"
                     /locus_tag="VFN38_01555"
     CDS             complement(1461..2600)
                     /gene="hppD"
                     /locus_tag="VFN38_01555"
                     /EC_number="1.13.11.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003868 - 4-hydroxyphenylpyruvate
                     dioxygenase activity [Evidence IEA];
                     GO_process: GO:0006559 - L-phenylalanine catabolic process
                     [Evidence IEA];
                     GO_process: GO:0006572 - tyrosine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylpyruvate dioxygenase"
                     /protein_id="HET9010464.1"
                     /translation="MATGMLEVAAQPHDTFPINGTDYIEFYVGNARQASHYYRAAFGF
                     HLVAYRGPETGTRDRASYLLQQGKIRFVLTTAIRPDLSPDAQRIADHVYEHGDGVRDL
                     ALWVDDARDAFRKAVERGAEPVHEPMVLTDDDGEIVIAAFRIYGETIHSLVERRNYRG
                     LFMPGFKAVTPHFNPPDVGLKYVDHCVGNVELGKMNHWVEFYAHVMGFRNLLTFDDKT
                     ISTEYSSLMSKVMANGNDRIKFPINEPAKGKRKSQIDEYLDFYKGPGVQHMALATDDI
                     IRTVTTLKERGVEFLSVPTTYYDDLQKRVGKIDEPVDELAKLGILIDRDPDGYLLQIF
                     TKPVEDRPTVFYEIIQRKGAKSFGAGNFKALFEAIEREQGLRGNL"
     gene            complement(2682..>3362)
                     /locus_tag="VFN38_01560"
     CDS             complement(2682..>3362)
                     /locus_tag="VFN38_01560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetoacetate--CoA ligase"
                     /protein_id="HET9010465.1"
                     /translation="GDPTLPVYRGELQTRGFGMDVAVYDERGEPVVGTPGELVCRAPF
                     PSMPVAFWNDPDGSRYRAAYFDAYPNVWRHGDWAELTPRGGLVIYGRSDATLNPGGVR
                     IGTAEIYRQVEQLPEVLESVVIGQRMHHKPGVDERVVLFVRLGEGMTLDDALRERIRK
                     QIRDNATPHHVPKKIIQVADIPRTISGKITELAVRDVVHGQPVKNVDALANPAALALF
                     RDLPELEL"
BASE COUNT          494 a         1104 c         1145 g          619 t
ORIGIN      
        1 gcgtgcgtgg cgatgctcag ccgccagcgc gtgaacgggt gtacgtaccg gtacacccac
       61 acgcgcggcg tgccggacga caggtctgga gcgagcttcc cagccgtctc cggctcgagg
      121 atcgccggcg cgccgatggg cacgccgacc gacgatgtat gaaccggcac gtcaggtcgt
      181 gggggggttg aacgcttcgt gctgggcgtc cacccagctc cggtggtact tcgggtcctc
      241 gatgtcgagc gcctgcttcg cgaccttcag cgggcggaag gtgtccatca tcaccgcgta
      301 ctcgtcggtg cccttggcct tcatcgacgc ctcggcgcgc cccggatgcg gcccgtgcgg
      361 gatgccgtcg ggatgcagcg tgatggagcc gaactcgatc cccttgcggc tcatgaactc
      421 gctggaggcg tagtagatga cctcatccga gtcgacattg ctgtggttat aaggggcggg
      481 gatcgcctcg ggatgaaaat caaatggtcg gggacagaac gagcagacga cgaagccgtc
      541 gccctggaag gtctggtgta cggggggcgg ctggtgcacc cggccgacga tgggctcgaa
      601 gtcgcggatg ttgaacgccc aggggtagaa ctggccgtcc cagcccacca cgtccagggg
      661 atggtggtcg aggatgatct cgttgatccc gtcgtactgc ttcacgagga tccggaagtc
      721 gcccttctcg tcgaaggtgc gcagcgtgcg cggcacgcgg atgtcgcgct cggagtacgg
      781 cgcaccctcg atgagctgcc cgtactcgtt gcgatagcgg gtggggggac gggtatgccc
      841 cttcccttcc atgatcagca gcttcgcctg ctcgctgccc gcgtcgaacc ggtagcggtg
      901 catgatgccg cgatggatca cgacgtagtc gccctcgccg aacgggaggt cgccgtactg
      961 ggtctcgagc atgcccgcgc ccttggagac gtacacgatc tcgtccgcct gggcgttgcg
     1021 gtagaagtgc tcgtcttcct tcgtcggctc cacgtacagc atcgccacgt cctggttgaa
     1081 catcagcggc acgcggtcga gcgtcgggct gccccctcgc ttcacccggg aggtgaggaa
     1141 gtggcgatgt cgtagcgtct ggtcgcaatc ggcctcgagc ggcgtctcct tcagccgctt
     1201 caccgacgtc accgtggtgg gcgggtgcac gtggtagagc agcgccgagg tgccggtgaa
     1261 gccctcgtgg cccacgagct gctccgcgta caggccgccg tcgggcttcc ggaaagcgat
     1321 gtgtcgcttc cgcgggatct ggccgagcgt gtgatagtac ggcatggcga atcctcattg
     1381 ggtgtcgtcc cgagcgcagc gagggacctg cacgcgtctc tcaggagcag gtcctttgcc
     1441 ttcggctcag gacgacagga ttacaggttt ccgcgcaggc cctgctcgcg ctcgatggcc
     1501 tcgaacagcg ccttgaagtt gccggcgccg aagctcttgg cccccttccg ctggatgatc
     1561 tcgtagaaca cggtggggcg gtcctccacc ggcttggtga agatctggag caggtagccg
     1621 tccggatcgc ggtcgatgag gatccccagc ttcgccagct cgtccaccgg ctcgtcgatc
     1681 ttcccgacgc gcttctggag gtcgtcgtag taggtcgtcg gcacgctgag gaactccaca
     1741 ccgcgctcct tgagcgtcgt caccgtgcgg atgatgtcgt cggtggcgag cgccatgtgc
     1801 tgcacgccgg gtcccttgta gaagtccaga tactcgtcga tctgcgactt gcgcttgccc
     1861 ttggccggct cgttgatggg aaacttgatc cggtcgttgc cgttcgccat caccttgctc
     1921 atcagcgagg agtactcggt gctgatggtc ttgtcgtcga aggtgagcag gttccggaag
     1981 cccatcacgt gggcgtagaa ctccacccag tggttcatct tccccagctc cacgttgccg
     2041 acgcagtggt cgacgtactt gaggccgacg tcgggggggt tgaagtgggg cgtcacggcc
     2101 ttgaagcccg gcatgaacag cccgcggtag ttccgccgct ccacgagcga atggatcgtc
     2161 tcgccgtaga tcctgaatgc ggcgatcacg atctcgccgt cgtcgtcggt gagcaccatc
     2221 ggctcgtgca ccggctcggc gccccgctcc acggcctttc ggaacgcgtc gcgcgcgtcg
     2281 tccacccaga gggcgaggtc acggacgccg tcgccgtgct cgtacacgtg atcggcgatg
     2341 cgctgggcgt cggggctcag gtcggggcgg atcgccgtcg tgaggacgaa gcggatcttg
     2401 ccctgctgga gcaggtagct ggcccggtcg cgtgtgcccg tctcgggccc gcggtacgcc
     2461 acgaggtgaa acccgaacgc cgcgcggtag tagtgggacg cctgccgcgc gttgcccacg
     2521 tagaactcga tgtagtccgt cccgttgatc gggaaggtgt cgtgcggctg cgccgccacc
     2581 tcgagcatgc cagttgccat gagactcccg tcggtccgag tgatgaatcc aatttagccc
     2641 gcgtcggcgc cgttcaccac gggcgcccgc gctgcccgcg cctacagctc cagctcgggc
     2701 aggtcgcgaa acagcgccag cgcggcggga ttcgccagcg cgtccacgtt cttcaccggc
     2761 tgcccgtgca caacgtcgcg caccgccagc tcggtgatct tgccgctgat cgtgcgggga
     2821 atgtcggcca cctggatgat cttcttcggc acgtggtgcg gggtggcgtt gtcgcgaatc
     2881 tgcttcctga tgcgctcgcg cagcgcatcg tccagcgtca tcccctcgcc gagccgcacg
     2941 aacagcacca cgcgctcgtc cacgcccggc ttgtggtgca tccgctggcc gatgacgacg
     3001 ctctcgagga cctcggggag ctgctccacc tgccggtaga tctcggccgt cccgatgcgc
     3061 acgccgcccg ggttcagcgt cgcgtcgctc cggccgtaga tcaccagccc gccgcggggg
     3121 gtgagctccg cccagtcgcc gtgccgccac acgttcgggt aggcgtcgaa gtacgcggcg
     3181 cgatagcggc tgccgtcggg atcgttccag aaggccaccg gcatgctggg aaagggggcg
     3241 cggcacacca gctcgcccgg cgtgccgacg acgggctcgc cccgctcgtc gtacacggcg
     3301 acgtccattc cgaatccgcg cgtctgcagc tccccccggt acacgggcag cgtgggatcg
     3361 cc
//
LOCUS       DASSYW010000096         2531 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_771433, whole genome shotgun sequence.
ACCESSION   DASSYW010000096 DASSYW010000000
VERSION     DASSYW010000096.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2531)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2531)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2531
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_771433"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            137..>2531
                     /locus_tag="VFN38_01565"
     CDS             137..>2531
                     /locus_tag="VFN38_01565"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HET9010466.1"
                     /translation="MSAIKGFAARARALLFRRATQQSLNDEIQFHIEQETTQNVRLGM
                     PPDEARRQALVQFGGLTQAREAHHDVYAARPIEDLVADTRYTLRTMRRTPVLAGAAVL
                     TLALGVGANTAIFSAVNAVILRPLPFPKPEQLYMLWEENPEKGWYKQVAAPANMFDWR
                     EQVAAFADVMAYTDMMGTSTLSDGGEPMIVKPARVTGNFFSVLGARPALGRTFVNAET
                     WRTGHRIAVLSHHLWRDRFGSDPGVVGRTIQLDGLPVEIVGVMPASFDYPNEKVDLWG
                     PSGFDPSSRQRVSFRRAHWLSVVARLKPGANEAAANAQLQAVVKRLQRDYPETNRVMG
                     AGMTPLHEFLVGNTRLPLLVLLGAVGLILLIACANVGNLMLVKASDREREAALRLALG
                     AGRRRLIRQALTESLVMSFVGGAAGVALGWWGTKALQAIQPAGMLRVSHFDFDWTVLG
                     YVLLITTLSGLLFGLAPAIWASRRLPQEALKEGGRGGSQSRRMRRWGERLVIGEVALA
                     LLLSIGAGLLVRSLLQLERVDPGFDPNGVLTARVSLPNAGYDTDEKVASFFAQLEDRL
                     RGIPGVASAAGVSDLPLEGSGYTSDFTVEGWPAGMYGTEVTHTRITPDYFKAMRTPVV
                     SGRAFTVADGAKSPSVVIINEAFAKKHFKGQDPVGKRVAFEKTPDSTTTWSTVIGVVK
                     SVHQLKLSDEPQIEVFEPIAQSATNALTMVVRTAGDPASLGPAVRRTVAEVDRSLAIE
                     SMKTAVVVRDASLAEQRFLTTLLLLFASVGLALAVVGVYGVMAQMARRRVREMGIRLA
                     "
BASE COUNT          384 a          846 c          897 g          404 t
ORIGIN      
        1 ggcgtgccgt tggcgtcgag gcggcgagct ggcggcggta cgtcgaggcc gtggagctca
       61 tcctgcagac tacctaacga ttcgagcgcg gtacccgcga ccgaaccgtc gcggggcagc
      121 cgcggttgga gcgaccatga gtgctatcaa gggattcgcg gctcgcgcgc gggcgctgct
      181 gtttcgtcgc gcgacgcagc agtcgctgaa cgacgagatc cagttccaca tcgagcagga
      241 gaccacgcag aacgtccggc tcggcatgcc cccggacgaa gctcggcgcc aggccctcgt
      301 ccagttcggc gggctcacgc aggcacgcga ggcgcaccac gatgtctatg cggcgcgtcc
      361 gatcgaggat ctcgtcgccg acacgcgcta cacgctccgc acgatgcgcc gtaccccggt
      421 gctcgcgggt gcggcggttc tcacgctggc actcggtgtc ggcgcgaaca cggcgatctt
      481 ctccgcggtc aacgcggtga tcctccgccc gctgccgttc ccgaagcccg aacagctgta
      541 catgctctgg gaggagaatc ccgagaaagg ctggtacaag caggtcgccg cgccggcgaa
      601 catgttcgac tggcgcgagc aggtcgcggc gttcgcggac gtgatggcgt acaccgacat
      661 gatgggaacg tcgacgctga gcgacggcgg tgagccgatg atcgtgaagc ccgcgcgcgt
      721 gaccggcaac ttcttctcgg ttctcggcgc tcgcccggcg ttaggtcgca cgttcgtgaa
      781 cgccgaaacc tggcggacgg gccaccggat cgccgtgctg tcgcatcacc tctggcgtga
      841 ccgattcgga agcgatccgg gcgtggtcgg acgcacgatc cagctcgacg ggctgcccgt
      901 cgagatcgtc ggggtcatgc cggcgagctt cgactaccct aacgagaagg tcgatctctg
      961 ggggccgtcc ggattcgacc cgtccagccg ccagcgagtg tccttccggc gcgcacactg
     1021 gctgagcgtc gtggcgcggc tcaagcccgg cgcgaacgag gcggcggcca atgcccaact
     1081 gcaggccgtc gtgaagcggc tgcagcgcga ctacccggag accaatcgcg tgatgggcgc
     1141 gggaatgacg cccctccacg agttcctcgt gggcaacacg cgcctgccgc tgctcgtgct
     1201 gctcggcgcc gtcggcctta ttctcctcat cgcgtgcgcg aacgtcggca atctgatgct
     1261 ggtgaaggcg tccgaccgcg agcgggaggc ggcgctgcgg ctcgccctcg gagcgggacg
     1321 ccggcggctc atccggcagg cgctcaccga gagcctcgtc atgtcgttcg tcggcggggc
     1381 ggccggcgtc gcgttaggct ggtgggggac gaaggcgctg caggccatcc agccggccgg
     1441 catgctgcgc gtgtcgcact tcgatttcga ctggacggtg ctcggctacg tcctcctgat
     1501 cacgacgctg agcggtctgc tgttcgggct ggcgccggcg atctgggcga gccgacgatt
     1561 gccgcaggag gcactcaagg agggtggtcg aggcggcagc cagagtcgcc ggatgcgtcg
     1621 ctggggtgaa cgcctcgtca tcggcgaagt cgcgctggcg cttctcctca gcatcggcgc
     1681 ggggctgctc gtgcgcagcc tcctccagct cgagcgcgtg gaccccggct tcgacccgaa
     1741 cggcgtgctg acggcgcggg tgtcgctgcc taacgctggc tacgacaccg acgagaaggt
     1801 cgccagcttc ttcgcgcagc tcgaggaccg gctgcgcgga atcccgggcg tggcaagcgc
     1861 cgccggcgtc tcggaccttc cgctcgaggg ctcgggctac acgagcgact tcaccgtcga
     1921 gggctggccg gccggcatgt acggcaccga ggtcacccac acccgcatca cccccgacta
     1981 cttcaaggcg atgcgcacgc cggtcgtctc gggccgcgcc ttcacggtcg ccgacggcgc
     2041 gaagtcgcca tccgtcgtga tcatcaacga agcgttcgcg aagaagcact tcaagggaca
     2101 ggatccggtc ggcaagcgcg tcgcgttcga gaagacaccc gactcgacga cgacgtggag
     2161 caccgtgatc ggtgtggtga agagcgtcca tcagctgaag ctgagcgacg agccgcagat
     2221 cgaggtgttc gagccgatcg cgcagtcggc gacgaacgca ctcaccatgg tggtccggac
     2281 cgccggcgat ccggcatcgt taggtccggc ggttcggcgc accgtggcgg aggtcgaccg
     2341 gtcgctggcg atcgagtcga tgaagacggc ggtcgtggta cgcgacgcct cccttgcgga
     2401 gcagcggttc ctcaccacgc tgctgcttct gttcgcgagc gtcggcctgg ctctggcggt
     2461 cgtcggcgtc tacggcgtca tggcgcagat ggctcgccgc cgcgtgcgcg agatgggcat
     2521 ccgtctcgcc c
//
LOCUS       DASSYW010000097         3346 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1103150, whole genome shotgun sequence.
ACCESSION   DASSYW010000097 DASSYW010000000
VERSION     DASSYW010000097.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3346)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3346)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3346
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1103150"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..759
                     /locus_tag="VFN38_01570"
     CDS             <1..759
                     /locus_tag="VFN38_01570"
                     /inference="COORDINATES: protein motif:HMM:NF013705.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="J domain-containing protein"
                     /protein_id="HET9010467.1"
                     /translation="GAGGAPGRARGPQRGEDIESSLEIPFRTAALGGKVPVELDVTEE
                     CATCHGSGAAPGAKLVTCSECGGRGTISFGQGGFAVQRPCPVCLGRGQVPTERCPTCN
                     GAADVRTRKKVVITVPPGVDEGTKIRLKGRGAHGSKGGPAGDLLITFHVKPDRFYKRE
                     GLDVIAPVKINIAQATLGTKLSVKTLDGRKVTIKIPHGTTSGKRFRVPGQGIERDGRH
                     GDLIVEVQVTVPETLTPEQEEAMKKFAEAMDYKA"
     gene            complement(776..1867)
                     /gene="mnmA"
                     /locus_tag="VFN38_01575"
     CDS             complement(776..1867)
                     /gene="mnmA"
                     /locus_tag="VFN38_01575"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: protein motif:HMM:TIGR00420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HET9010468.1"
                     /translation="MRERVLVAMSGGVDSSVAAALLVRQGYDVVGATMKLGCHGDELP
                     DRPCCSLDSVNDARRICDQLGVPHYVLNLESAFGRDVVRDFVDEYARGRTPIPCVRCN
                     TFTKVRDLLHKADAIDARWIATGHYARLRDGMLHRGLDPNKDQSYFLWGIARPVLSRM
                     LLPVGGQSKAETRAVAHELGLELIAEKPESQDICFVPDGDHAKVIARELGSDTPALAR
                     GPFIRRNGTVVGEHEGYARFTVGQRRGLPGGFREPMFVVEIQPATRAVVIGPRAELLG
                     KGVVARELNWLVDPPLAGAEVEVQIRHRARPVHGTIVRIADDEVEIALGEAVSAITPG
                     QSLVMYDGATVLGGGVIERARRGLPVMAA"
     gene            complement(1874..3031)
                     /locus_tag="VFN38_01580"
     CDS             complement(1874..3031)
                     /locus_tag="VFN38_01580"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase family protein"
                     /protein_id="HET9010469.1"
                     /translation="MPDPVYLDHAATTPVRAEVLEAMLPYFGPRFGNPSSVHRWGREA
                     RTALDEARERLARCLGATSDEVVFTSCGTEADNMAVIGVWRARRSSGRRAVVTTPIEH
                     KAVLAAAHEVAKEGGEERLLAMQAGGLVDEGSFDALVTDAVAVCSVMWVNNEIGVLQD
                     VASLAARSKARGVVFHTDAVQAFGKVEVDARTTPFDVLSISGHKIGAPKGIGALFIRR
                     GTPMEPRMFGGSQDRGRRPGTENVAMAIGLARAAELAVAERAHEWATLEAQRDRLEEA
                     ILARIPDAVIHGRGSPRAPHITNVSVPGVDSESMLMALDLRGVACSAGSACQSGSITP
                     SHVLSALGVPAELAGAAIRMSLGALTTDAGIDRVAELFPSLVEKARRLAPA"
     gene            complement(3117..>3346)
                     /locus_tag="VFN38_01585"
     CDS             complement(3117..>3346)
                     /locus_tag="VFN38_01585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010470.1"
                     /translation="LAAAGVKLVGVDAPSVDERDSKTLEVHHALFGGGAYVLENLDLR
                     GVAEGRYDLVALPQRLGGLDAAPVRAALLQR"
BASE COUNT          475 a         1230 c         1208 g          433 t
ORIGIN      
        1 ggcgccggcg gcgcgccggg ccgcgcgcgc gggccgcagc ggggcgaaga catcgaatcg
       61 tcgctggaga tccccttccg caccgccgcc ctgggcggca aggtgcccgt ggagctggac
      121 gtcaccgagg agtgcgcgac ctgccatggc agcggcgccg cgcccggggc gaagctggtg
      181 acgtgcagcg agtgcggcgg gcgcgggacg atcagcttcg gccagggtgg cttcgccgtc
      241 cagcgcccct gcccggtgtg cctcggtcgc ggtcaggtgc cgaccgagcg ctgtcccacc
      301 tgcaacggcg cggccgacgt gcgcacgcgg aagaaggtgg tgatcaccgt cccgccgggg
      361 gtggacgagg ggacgaagat ccgcctcaag ggacggggcg cgcacgggtc gaagggcggc
      421 cccgccggcg acctgctgat caccttccac gtgaagcccg accgcttcta caagcgcgaa
      481 gggctggacg tgatcgcgcc ggtgaagatc aacatcgccc aggcgaccct cgggacgaag
      541 ctgagcgtga agacgctgga cggacggaag gtgacgatca agatcccgca cggcacgacg
      601 tcgggaaagc gcttccgggt gccggggcag gggatcgagc gcgacggccg ccacggcgac
      661 ctgatcgtgg aggtgcaggt gacggtgccg gagacgctga cgcccgagca ggaagaggcg
      721 atgaagaagt tcgccgaggc gatggactac aaggcctagg gcgcgcgggg tccgctcacg
      781 ccgccatcac cggcagcccg cgccgcgccc gctcgatcac cccgccaccc agcaccgtcg
      841 cgccgtcgta catcaccagc gactgtccgg gcgtgatcgc gctcaccgcc tcgccaaggg
      901 cgatctccac ctcgtcgtcc gcgatgcgca cgatggtgcc gtgcaccggc cgcgcgcgat
      961 gccggatctg cacctccacc tcggcaccgg cgagcggggg atccaccagc caattgagct
     1021 cgcgcgccac gactcccttg ccgagcagct ccgcgcgcgg gccgatcacc acggcgcgcg
     1081 tggccggctg gatctccacc acgaacatcg gctcgcggaa gccacccggc aggccgcgcc
     1141 gctggcccac cgtgaaccgc gcgtatccct cgtgctcgcc caccaccgtg ccgttccggc
     1201 ggatgaaggg gccgcgcgcg agggcggggg tgtcgctgcc cagctcccgg gcgatcacct
     1261 tggcgtggtc gccgtcgggg acgaagcaga tgtcctggct ctcgggcttc tcggcgatca
     1321 gctcgaggcc gagctcgtgc gcgacggcgc gcgtctccgc cttcgactgc ccacccacgg
     1381 ggagcagcat gcgcgacagc acgggacgcg cgattcccca caggaagtac gactggtcct
     1441 tgttgggatc gagcccgcgg tgcagcatcc cgtcgcggag ccgggcgtag tgcccggtgg
     1501 cgatccagcg cgcgtcgatc gcgtcggcct tgtggagcag gtcgcggacc ttggtgaacg
     1561 tgttgcagcg cacgcacggg atgggcgtgc gtccgcgcgc gtactcgtcc acgaagtcgc
     1621 gcaccacgtc gcgcccgaac gcgctctcca ggttcagcac gtagtgcggt acgcccagct
     1681 ggtcgcagat gcgacgtgcg tcgttcacgc tgtcgagcga gcagcagggg cggtcgggca
     1741 gctcgtcgcc gtggcagccg agcttcatcg tcgcgcccac cacgtcgtag ccctgcctca
     1801 cgagcagcgc cgccgcgacg gaggaatcca cgccgccgct catggccacc agcacgcgct
     1861 cgcgcatcgg tcgtcaggcg ggcgcgagcc gccgggcctt ctcgacgagg gaggggaaca
     1921 gctccgccac ccggtcgatg cccgcgtcgg tcgtcagcgc gcccaggctc atccggattg
     1981 cggcgcccgc gagctccgcg ggcacgccca gggcgctgag gacgtgcgag ggggtgatgc
     2041 tcccgctctg gcaggcggag cccgccgagc aggcgacgcc gcgcaggtcg agggccatga
     2101 gcatggactc gctgtccacc ccgggcaccg agacgttggt gatgtgcggc gcccgcgggc
     2161 tgccgcgtcc gtggatcacc gcgtcgggga tgcgggcgag gatcgcctcc tcgagccggt
     2221 cgcgctgcgc ctcgagcgtc gcccactcgt gcgcgcgctc cgccaccgcc agctctgcgg
     2281 cgcgcgcgag gccgatggcc atggccacgt tctccgtacc cggccggcgg ccgcggtcct
     2341 ggctgccgcc gaacatccgc ggctccatcg gggtgccgcg ccggatgaag agggcgccga
     2401 tccccttggg cgcgccgatc ttgtgtccgg agatggagag gacgtcgaac ggcgtggtgc
     2461 gcgcgtccac ctccaccttc ccgaaggcct gcaccgcatc cgtgtggaac acgaccccgc
     2521 gcgccttcga gcgcgccgcg agcgacgcca cgtcctggag gacgccgatc tcgttgttca
     2581 cccacatcac cgagcagacg gcgacggcgt cggtgacgag cgcgtcgaac gagccctcgt
     2641 ccacgagccc gcccgcctgc atggcgagca gccgctcctc gcccccttcc ttcgccacct
     2701 cgtgcgccgc cgccaatacc gccttgtgct cgatcggcgt ggtcacgacg gcgcggcggc
     2761 ccgaggaccg cctggcccgc cagacaccga tgaccgccat gttgtccgcc tcggtgccgc
     2821 acgaggtgaa gacgacctcg tccgaggtgg cgccgaggca tcgtgccagc cgctcgcggg
     2881 cctcgtcgag ggccgtgcgg gcttcgcgcc cccagcgatg gacgctggac gggttgccga
     2941 agcggggccc gaagtagggc agcatcgcct ccagcacctc ggcgcggacc ggggtggtgg
     3001 cggcgtgatc gaggtagacg gggtcaggca tacgcttgta agctaacgac ttgggcggag
     3061 gcgagaaatg ggcgcgtcgc tggccggcgc cccccgcgca cggtgcgtcg cccggctcac
     3121 cgctgcagca gcgccgcccg caccggtgcg gcatccagcc cgcccagccg ctgcgggagg
     3181 gccacgaggt cgtagcgtcc ctcggccact ccgcgcaggt cgaggttctc gaggacgtac
     3241 gcgccgccgc cgaacagcgc gtggtgcacc tccagcgtct tgctgtcgcg ctcgtccacc
     3301 gacggcgcgt ccacccccac cagcttcacg cccgcggccg cgagca
//
LOCUS       DASSYW010000098         2127 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_918835, whole genome shotgun sequence.
ACCESSION   DASSYW010000098 DASSYW010000000
VERSION     DASSYW010000098.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2127)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2127)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2127
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_918835"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            194..592
                     /locus_tag="VFN38_01590"
     CDS             194..592
                     /locus_tag="VFN38_01590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010471.1"
                     /translation="MAVARKFVWHLGEMFLAMVVGMAALDAVFEGTLTLAGTSYAAVE
                     DAAPAAIALILMFNMTAPMLLWMRIRGHETSEVSEMSVAMVVVGAMTVFLLWLAVIDA
                     AAICGIECGLMIPAMIAAMLLHPWLQARRG"
     gene            complement(755..>2127)
                     /locus_tag="VFN38_01595"
     CDS             complement(755..>2127)
                     /locus_tag="VFN38_01595"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HET9010472.1"
                     /translation="KHLELAYWLPDAERWVDQAGNPRAVDITHPGVILVDHRGSRIAA
                     LSIDPPPAVQPDLDGPLMAAAGLALEAERLKLALQSRLDEQQALRRVATAVARQHERE
                     EILSLVATEVARHLAADAALTARYDGPGLATVLAEWSAPGVGHFPAGRQIAIGGPTAL
                     AQVQRTGEPARVDSYEGMPGDYPAEIRRLGMRASVAAPILVDGHLWGAVGAASVRAPF
                     PELAEVRLGAFAELVAQAIASVDARLKLDESRARIVEAADEARRKIERDLHDGAQQRL
                     VALALSLGVVAKRAEPATASAINACGEELHAALAELRELARGIHPVVLTERGLEAALD
                     ALAARSPVPASVDVRLACRLPAAQEAALYFVAAEALTNAAKYARATALRIKVRESDEW
                     AEISIVDDGVGGAAGATGSGLRGLADRLEALRGEVAVDSPPGEGTMVHARVPIGTLRV
                     DVVPAR"
BASE COUNT          282 a          767 c          758 g          320 t
ORIGIN      
        1 gcacgaccgg cggcccgctc gcctacttcg cgcgcttcgt gccagaaccg acgacgaagg
       61 ccccgtcggt ggcgtgatgc cgatccgctc atgcgatgcc gtagttgccc ggaagtcgtt
      121 caggggagac ggcggatgac accgtgcagc cgagcgcgca tagtggctaa cagcacaagt
      181 agggaggtgc gccatggccg ttgcccgtaa gttcgtctgg catctcggcg agatgttcct
      241 cgccatggtc gtcgggatgg ccgccctcga cgccgtcttc gaagggaccc tcacgctggc
      301 ggggacgtcg tacgccgccg tcgaagacgc cgcaccggcc gccatcgcgc tgatcctgat
      361 gttcaacatg acggcgccga tgctgttgtg gatgcgcatc cggggacacg agacatccga
      421 ggtctctgag atgagcgtcg cgatggtcgt cgtcggcgcg atgaccgtct tcctgctgtg
      481 gctggcggtg atcgacgccg cggcgatctg cggcatcgag tgcggcctga tgatcccggc
      541 gatgatcgcg gcgatgctgc tccatccgtg gctgcaggca cgacggggct gacgtttcag
      601 cccgtgcacg acggccgcct cgggcggggc gaccgtcgtg ccggcacgca tcgccctcgc
      661 ttcggcgact gcgggttgcc gacggcgccg acgcctgctc gcgagccgtc gcgcgaggtg
      721 gcgtggccgg ccatcccacc cgctgtgcat tgcactaccg agccggaacg acgtccacgc
      781 gcagcgtgcc aatgggcacc cgcgcatgga ccatcgtgcc ctctcccgga gggctgtcga
      841 cggcgacctc tcccctgagc gcttcgaggc gatccgcgag tccgcgcagg ccgctcccgg
      901 tggcgccggc agcccctccg acgccatcgt cgacgatgga gatctcagcc cactcgtcgg
      961 actcgcgtac cttgatccgc agggctgtcg cgcgggcgta cttggctgcg ttcgtcagcg
     1021 cctcggccgc cacgaagtac aacgccgcct cctgagctgc cggaaggcgg cacgcgagcc
     1081 ggacgtcgac ggaggcgggc acgggtgaac gagcggcgag tgcatccagg gccgcctcca
     1141 agccacgctc ggtgagcacg acggggtgga ttccgcgcgc gagctcccgg agctccgcga
     1201 gcgcggcgtg gagctcctcg ccgcaggcgt tgattgccga tgccgtggcc ggctctgccc
     1261 gcttggccac cacgccgagc gacagcgcca gcgcgaccag ccgctgctgg gcgccgtcgt
     1321 ggagatcgcg ctcgatcttc cggcgcgcct cgtcggcggc ctccacgatg cgtgcccgcg
     1381 actcgtcgag cttgagccgt gcatcgacgc tggcgatcgc ctgcgcgacc agctcggcga
     1441 acgctccgag ccggacctcc gccagctcgg ggaacggcgc gcgcacggat gccgcgccga
     1501 cggcgcccca cagatggccg tcgacgagga tcggcgcggc cacgctcgcc cgcatgccga
     1561 gccgccgtat ctccgccgga tagtcgcccg gcatcccctc gtagctgtcg acccgagccg
     1621 gctcgccggt ccgctgcacc tgggcgagcg ccgtcggccc gccaatcgcg atctgccgtc
     1681 ccgcggggaa gtggcccacg ccgggggcgc tccactcggc gagcaccgtg gcgagacccg
     1741 ggccgtcgta ccgtgcggtc agcgccgcgt ccgcagcgag gtgtcgagcc acctcggtcg
     1801 ccacgagcga caggatctcc tcgcgctcgt gctgtcgtgc gactgccgtc gcgacgcggc
     1861 gcagcgcctg ctgctcgtcg agacgggatt ggagcgcgag cttcaggcgc tcggcctcga
     1921 gtgcgagtcc ggcggcggcc atcaacgggc cgtcgaggtc cggctgcacg gccggcggcg
     1981 ggtcgatgct cagtgcggcg atgcggctcc cgcggtggtc cacgaggatc acgcccggat
     2041 gcgtgatgtc gactgcccgc gggttgccgg cctggtcgac ccatcgctct gcgtccggca
     2101 gccagtaggc gagctccaga tgcttgg
//
LOCUS       DASSYW010000099         2663 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1232084, whole genome shotgun sequence.
ACCESSION   DASSYW010000099 DASSYW010000000
VERSION     DASSYW010000099.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2663)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2663)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2663
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1232084"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..816
                     /locus_tag="VFN38_01600"
     CDS             <1..816
                     /locus_tag="VFN38_01600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine synthetase"
                     /protein_id="HET9010473.1"
                     /translation="DDLEQMGFEVEAAHHEVAHGQHEVDFRYADALTTADNLATFRFV
                     VKVVAQRYGLAASFMPKPIFGQNGSGMHTHQSLFKGKTNAFWDDQAQWELSATALHYI
                     GGLLRHARGTTAITNPLVNSYKRLVPGYEAPVNVAWSMRNRSPMLRIPERRGLGTRVE
                     HRVPDPAANPYLALAVMLAAGLDGIRTSADYREPVNENIWEMSHREKRRLRIDDLPHD
                     LNEACDELEKNDVVRAALGDHITTQFLAAKRQDWREYITQVSAWELENYLAKY"
     gene            complement(829..1611)
                     /locus_tag="VFN38_01605"
     CDS             complement(829..1611)
                     /locus_tag="VFN38_01605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010474.1"
                     /translation="MPSVPSLPTTRCTHDLGYGTTVCLRCRQEERDAARSRQQRLFAL
                     CGIGAMALLGVYVMGASAANAWRAATHADTVRVASRASVVASSVSASGRGEVTQQGTA
                     ATLVSSPVAAPAPSPSPAPVSTGAAPAAPGMSPPLSILVREGRSNLPDSLIAERGGDS
                     VIVDFDTPMTRTRRRDKFETVVRRTLPMVFGAPIDSVLRSIPAGAIVGDADLLTELPK
                     RGVHVPVADGWTLDLWPETRPGQDGPLVVSYRARVTRDGALR"
     gene            complement(1731..>2663)
                     /locus_tag="VFN38_01610"
     CDS             complement(1731..>2663)
                     /locus_tag="VFN38_01610"
                     /inference="COORDINATES: protein motif:HMM:NF024491.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D-like domain-containing protein"
                     /protein_id="HET9010475.1"
                     /translation="AGVRIHFLYDAFGSSFPKEYIHALKAAGIVAEPFRPISVLAAHH
                     VQNRAHIRVVCVDGRIGYTGGFGIADKWFGNGRDEGQWRDSNVRFTGPAVRQLQSAFV
                     ACWAEATGDLLVGDRLFPPIAPHEDGVLAGVLHGSPSVGSTEAERFFALTIASARKRL
                     WITNSYFVPDREFRRMIADAAKRGVDTRILTAGPKTDVKSTLYAGRARYEELMRAGVR
                     IYEYRNTMMHAKTVVVDGLWGAVGSMNADNRSLSFNEETVLMMLDAGAAGSLEKHFTD
                     DIAHADEILLAEFRQRGAWDRIKEHVTHLVWRVL"
BASE COUNT          421 a          886 c          985 g          371 t
ORIGIN      
        1 gacgacctgg agcagatggg gttcgaggtg gaggcggcgc accacgaggt ggcgcacggc
       61 cagcacgagg tggacttccg ctacgccgac gcgctgacga cggccgacaa cctcgcgacc
      121 ttccgcttcg tcgtgaaggt ggtggcgcag cggtacgggc tcgcggcgtc gttcatgccc
      181 aagcccatct tcgggcagaa cggcagcggg atgcacacgc accagtcgct gttcaagggg
      241 aagacgaacg cgttctggga cgaccaggcg cagtgggagc tgagcgcgac ggcgctgcac
      301 tacatcggcg ggctgctgcg gcacgcgcgc ggcacgacgg cgatcaccaa tccgctcgtc
      361 aactcctaca agcgcctggt gccgggctac gaggcgccgg tgaacgtcgc gtggagcatg
      421 cgcaaccgct caccgatgct gcgcatcccc gagcggcgcg ggctggggac gcgggtggag
      481 catcgggtgc ccgatcccgc ggcgaacccg tacctcgcgc tggcggtgat gctggccgcg
      541 gggctcgacg gcatccgcac gagcgccgac taccgcgagc cggtgaacga gaacatctgg
      601 gagatgagcc accgcgagaa gcgtcggctg cgcatcgacg acctgccgca cgacctgaac
      661 gaggcgtgcg acgagctgga gaagaacgac gtcgtgcgcg cggcgctggg cgaccacatc
      721 acgacacagt tcctggccgc caagcggcag gactggcgcg aatacatcac gcaggtgtcg
      781 gcgtgggagc tggagaacta cctggcgaag tactagggcg gcgcgcgcct agcgcagcgc
      841 gccgtcccgc gtcacgcgcg cgcgatagct gaccaccagc ggtccgtcct gcccgggccg
      901 agtctccggc cacaggtcca gcgtccatcc gtcggcgacg gggacgtgca cgccgcgctt
      961 cggcagctcg gtcaggaggt cggcgtcgcc gacgatcgcg cccgcgggga tcgagcgcag
     1021 cacggagtcg atcggcgcgc cgaacaccat cggcagggtg cggcggacga cggtctcgaa
     1081 cttgtcccgg cggcgggtgc gcgtcatcgg cgtgtcgaag tcgacgatca cgctgtcgcc
     1141 accgcgttcg gcgatcaggc tgtctggcag gttgctgcga ccttcccgca cgaggatcga
     1201 cagcggcggg ctcatgcccg gcgcggccgg cgcggcgccc gtcgagacgg gggccgggga
     1261 gggtgaaggg gcgggtgccg ccaccgggga ggaaacgagg gttgcggctg tgccctgctg
     1321 cgtcacctct ccccggccgc tcgcgctcac gctcgacgcg accacgctcg cgcgagaggc
     1381 gacgcgaacc gtgtcggcgt gcgtcgcggc gcgccacgcg ttggccgcgc tggcccccat
     1441 gacgtatacg ccgagcagcg ccatcgcacc gatgccgcag agcgcgaaga gccgctgctg
     1501 gcgtgaccgg gcagcgtcgc gctcctcctg acggcagcgg aggcagacgg tggtgccgta
     1561 cccgagatcg tgggtgcagc gggtggtcgg aagggacggc acggacggca cggcgggact
     1621 cctggtgggg acgctaccct tggacgaaca gccggggccg gacggaacat tcgaccgccc
     1681 ggaggccaga ttgcccgatc cttcgccccc gggccggtac cgccggtgat tcagagcact
     1741 cgccacacca ggtgggtgac gtgctccttg atccggtccc acgctccgcg ctgccggaac
     1801 tcggcaagga ggatctcgtc ggcgtgggcg atgtcgtcgg tgaagtgctt ttcgagggac
     1861 ccggcggcac cggcgtcgag catcatcagc accgtctcct cgttgaacga gagtgagcgg
     1921 ttgtcggcgt tcatgctgcc cacggcaccc cacaggccgt ccacgacgac cgtcttggcg
     1981 tgcatcatcg tgttgcggta ctcgtagatg cgcacgccag cgcgcatgag ctcctcgtag
     2041 cgcgcgcggc ccgcgtacag ggtgctcttc acgtcggtct tcggtcccgc ggtgaggatg
     2101 cgggtatcca cgccgcgctt cgcggcgtcg gcgatcatgc gccgaaactc gcgatcgggc
     2161 acgaagtacg agttggtgat ccagagccgt ttgcgcgcgc tcgcgatcgt cagcgcgaag
     2221 aagcgctcgg cctcggtgct gccgacggag ggtgagccat gcagcacccc cgcgagcacg
     2281 ccgtcctcgt gcggcgcgat cggcggaaag aggcggtcgc cgacgagcag atcgccggtg
     2341 gcctcggccc agcaggcgac gaacgccgac tggagctgac gtacggcggg gccggtgaag
     2401 cgcacgttgg agtcgcgcca ctgcccttcg tcgcgtccat tgccgaacca cttgtcggcg
     2461 atgccgaagc cgcccgtgta gccgatgcgg ccgtccacgc agacgacccg gatgtgcgcg
     2521 cgattctgca cgtgatgcgc ggcgagcacg ctgatggggc ggaagggctc ggcgacgatc
     2581 ccggccgcct tcagcgcgtg gatgtactcc ttggggaagg agctgccgaa ggcgtcgtag
     2641 agaaagtgga ttcgcacgcc ggc
//
LOCUS       DASSYW010000100         2298 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1287122, whole genome shotgun sequence.
ACCESSION   DASSYW010000100 DASSYW010000000
VERSION     DASSYW010000100.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2298)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2298)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2298
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1287122"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..921
                     /locus_tag="VFN38_01615"
     CDS             <1..921
                     /locus_tag="VFN38_01615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010476.1"
                     /translation="SSSRLGILAAAALALLACERPRDAATREVPTREASAGPRPAATL
                     DSVVVQDSAGWSSFQARLPKRADSAAAALERYRRTHGLPFEFFLRKDAPAALVRALRT
                     EEPDMSCGTTFATAFVRRMPREHSVLDVAPVIEFDSTGRMLRRWPLPNDVEYWEMVAG
                     VRGDELVTLYRPNGPEGVFLRVRPDGEYRVSAEPPQPLPPQAWIKVEDSVFLRVQPRD
                     EGPYYAYPNGASPALEGTWEPAGDSGWYVRTDSGPKRGTRARARTLDNREPSPRILAC
                     PAGAAFEGMLCRGFPDGATERRIAYPTPCT"
     gene            924..1424
                     /locus_tag="VFN38_01620"
     CDS             924..1424
                     /locus_tag="VFN38_01620"
                     /inference="COORDINATES: protein motif:HMM:NF017015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HET9010477.1"
                     /translation="MEIRDPKIFLAYLDNVHARTRRVIACVPAADLEWAPAPGRFSFG
                     DLTRHLAGIERHLYAETVRGKPNRYPGHGREHADGQAAVLDYYDRLHAESRAIFASLT
                     ADALVAKCVTPDGARITVWKWLRAMLEHEMHHRGQLYLMLGLRGVPTPPLFGLTSEDV
                     RARASQ"
     gene            1432..2097
                     /locus_tag="VFN38_01625"
     CDS             1432..2097
                     /locus_tag="VFN38_01625"
                     /inference="COORDINATES: protein motif:HMM:NF024852.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-binding protein"
                     /protein_id="HET9010478.1"
                     /translation="MKVIVFGATGSAGGSVLRACLAAPEVSEVRAVVRRHVLRVAHQK
                     LAVFVTDDFLDYHAIPAAFAGADACFFCLGVSATRVRNESEYRRITRDFAVAAATALK
                     SASPAASFHFISGQGTRADSRFMWARVKAEAERDLIGLVRATCYRPAAIDGEPSDSAA
                     SWYGPLRPLFKLFAPFRGLYISGADLGHAMLQATAEDLHGVVLENAQIRDLADRYASA
                     HRR"
BASE COUNT          298 a          861 c          815 g          324 t
ORIGIN      
        1 tcgtcgagcc gcctcggaat cctcgccgcg gcggcgctcg ccctcctcgc ctgcgaacgg
       61 ccgcgcgacg ccgcgacgcg cgaagtcccg acgcgggaag ccagcgccgg cccgcggccc
      121 gccgcgacgc tcgacagcgt cgtcgtgcag gacagcgccg gctggtcgtc cttccaggcg
      181 cgtctcccga agcgcgccga ctcggcggcc gccgcgctcg agcgctaccg ccgaacgcat
      241 gggctcccgt tcgagttctt cctcaggaag gacgcccccg ccgcgctcgt ccgcgcgctc
      301 cggaccgagg agcccgacat gtcgtgcggc accaccttcg ccaccgcctt cgtgcgacgg
      361 atgccacgcg agcactccgt cctcgacgtg gcgcccgtca tcgagttcga ctccaccggc
      421 cgcatgctgc gccgctggcc gctgccgaac gacgtcgagt actgggagat ggtggccggc
      481 gtgcgaggcg acgagctggt gacgctgtac cgtccgaacg gccccgaggg cgtctttctg
      541 cgcgtgcggc cggacggcga gtaccgcgtg tccgccgagc cgccgcagcc cctgcccccc
      601 caggcatgga tcaaggtcga ggactccgtc tttctccgcg tgcagccgcg ggacgagggt
      661 ccctactacg cctacccgaa cggcgcgagc cccgcgctcg agggaacgtg ggaaccggcg
      721 ggcgactcgg gctggtacgt ccgcaccgat tcgggaccga agcgcggaac gcgcgcccgc
      781 gcgaggacgt tggacaacag ggagccgagc ccgcgcatcc tcgcctgccc ggcgggcgcg
      841 gccttcgagg ggatgctctg ccgcggcttc cccgacggcg cgaccgagcg gcggatcgcc
      901 tatcccacgc cctgcacctg acgatggaga tccgcgaccc gaagatcttc ctcgcctacc
      961 tcgacaacgt gcacgcccgc acgcggcgcg tcatcgcctg cgtccccgcg gccgacctcg
     1021 agtgggcgcc ggcgccgggc cgcttctcct tcggcgacct gacccgccac ctcgccggga
     1081 tcgagcgcca tctctacgcc gagacggtgc gcggcaagcc gaaccgctat cccggccacg
     1141 gccgcgagca cgccgacggc caggccgcgg tgctcgacta ctacgacagg ttgcacgccg
     1201 agtcgcgcgc gatcttcgcg tcgctcacgg ccgacgctct cgtcgcgaag tgcgtcaccc
     1261 cggacggcgc gcggatcacc gtctggaagt ggctgcgggc gatgctggag cacgagatgc
     1321 atcaccgcgg tcagctctat ctcatgctcg gcctgcgcgg cgtgccgacg cctcccctct
     1381 tcgggctgac gtcggaggac gtgcgggcgc gggccagcca gtgagcgcgc catgaaggtg
     1441 atcgtcttcg gcgccaccgg ctcggcggga ggaagcgtgc tgcgcgcctg tctcgccgcg
     1501 ccggaggtga gcgaggtgcg cgcggtcgtg cgccgccacg tgctccgcgt cgcgcaccag
     1561 aagctcgccg tcttcgtgac cgacgacttc ctggactacc acgccatccc cgccgccttc
     1621 gccggcgccg acgcctgctt cttctgcctc ggcgtctcgg cgacgcgggt acggaacgag
     1681 agcgagtacc ggaggatcac gcgcgacttc gccgtcgccg cggccaccgc gctgaagagc
     1741 gccagtccgg cggcgtcgtt ccacttcatc agcggccagg gcacgcgcgc cgacagccgc
     1801 ttcatgtggg cgcgggtgaa ggccgaggcc gagcgcgacc tgatcggcct cgtgcgcgcg
     1861 acctgctaca ggccggcggc gatcgacggc gagccgtcgg acagcgcggc gagctggtac
     1921 ggcccgctcc gcccgctctt caagctgttc gcgcccttcc gcggcctcta catctccggc
     1981 gcggacctcg gccacgcgat gctgcaggcg acggccgagg acctgcacgg cgtcgtgctc
     2041 gagaacgcgc agatccgcga cctcgccgac cgctacgcca gcgcgcaccg gcgttaggcg
     2101 gggggcgggg tgcggggggc gggggcgggg tgcggggtgc ggggtgcggg gtgcgggacg
     2161 atcggtagac ggtggacggt agacggtggt cggtgactgc cgttacctgc tactgtctac
     2221 catctaccgt gtaccgtgta ctggttgggc tcctcgcgcc acgagcctgc tcgcgttggc
     2281 ttgccgagtg gtgagtcg
//
LOCUS       DASSYW010000101         2345 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1803095, whole genome shotgun sequence.
ACCESSION   DASSYW010000101 DASSYW010000000
VERSION     DASSYW010000101.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2345)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2345)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2345
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1803095"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..726
                     /locus_tag="VFN38_01630"
     CDS             <1..726
                     /locus_tag="VFN38_01630"
                     /inference="COORDINATES: protein motif:HMM:NF013645.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010479.1"
                     /translation="KGLSGGVLAVRPPDDAAFVAEENVVIGNTVLYGATAGRAFFRGL
                     AGERFAVRNSGVSAVVEGVGDHGCEYMTGGRVVVLGTTGRNFAAGMSGGVAYVLDRDG
                     SFDTRCNTELVELEEPSAADLDEIRALVEEHRERTGSTVADGVLSNWDGLQGNWVKVM
                     PMDYKRALREQAERAADQPTPYGAAGDGHQEATRLGEAGQHEDAAMAAERQGEVARKE
                     GDPPGEKEQQEEEAEEEVLPSHG"
     gene            719..2161
                     /locus_tag="VFN38_01635"
     CDS             719..2161
                     /locus_tag="VFN38_01635"
                     /inference="COORDINATES: protein motif:HMM:TIGR01317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase subunit beta"
                     /protein_id="HET9010480.1"
                     /translation="MGELGGFLKIHRVGHDKRPIEERIGDFKEYTLPVAEPQLREQGA
                     RCMDCGIPFCHSGCPLGNLIPDWNDLVYRDRWQDAIKALHATNNFPEFTGRICPAPCE
                     AACVLDINDDAVTIKQIEQRIIDHAFEEGWVKPEPPAFRTGRTAAVIGSGPAGLAAAA
                     ELNTAGHQVTLYERNDRIGGLLRYGVPDFKLDKGVVQRRVDILAAEGIEMVTGVEVGK
                     DISAAELRERFDAIVIATGSTVPRDLPVPGRELDGVHFAMEYLEQRNRFVAGDDPAEK
                     PISAAGKHVVIIGGGDTGADCLGNSHRERPASITQFELLPEPPPERPEDITPWPRWPL
                     ILRTSGAHEEGGERRYSVMTTHLTGEDGRVTHLHGHEAGPPPSFDKIEGSEFTIPADL
                     ILLAMGFLHPQHEGLVEQLGVKLDQRGNVEGPEFATSEPGVFAAGDARRGQSLVVWAI
                     AEGRQAARAADTYLQSLGEPEGEELVAVPA"
BASE COUNT          365 a          853 c          841 g          286 t
ORIGIN      
        1 aagggcctct ccggcggcgt gctcgccgtg cgcccgcccg acgacgccgc cttcgtggct
       61 gaggagaacg tcgtcatcgg caacaccgtg ctctacggcg cgaccgcggg ccgggccttc
      121 ttccgcggcc tcgcgggcga gcgcttcgcg gttcgcaact cgggcgtctc cgcggtggtg
      181 gagggcgtcg gcgaccacgg ctgcgagtac atgaccggcg gccgcgtggt ggtgctcggc
      241 accaccgggc gcaacttcgc ggccggcatg agcggcggcg tcgcgtacgt gctcgaccgc
      301 gacggcagct tcgacacgcg ctgcaacacc gagctggtcg agctcgagga gccgagcgcc
      361 gccgatctcg acgagatccg cgcgctggtc gaggagcacc gcgagcggac cgggtccacg
      421 gtcgccgacg gcgtgctctc caactgggac ggcctccagg gcaactgggt gaaggtcatg
      481 ccgatggact acaagcgcgc gctgcgcgag caggccgagc gcgcggccga ccagcccact
      541 ccgtacggcg ccgcgggcga cggccaccag gaggccacgc gcctcggcga ggcgggccag
      601 cacgaggacg ccgccatggc cgccgagcgc cagggcgagg tggcgcgcaa ggagggcgat
      661 ccgcccggcg agaaggagca gcaggaggaa gaggccgagg aggaggtgct cccaagccat
      721 gggtgagctc ggcggcttcc tgaagatcca ccgcgtcggg cacgacaagc gcccgatcga
      781 ggagcgcatc ggcgacttca aggagtacac gctcccggtg gccgagccgc agctgcgcga
      841 gcagggcgcg cgctgcatgg actgcggcat cccgttctgc cactcgggct gcccgctcgg
      901 caacctgatc cccgactgga acgacctcgt ctaccgcgac cgctggcagg acgcgatcaa
      961 ggcgctccac gcgacgaaca acttccccga gttcaccggc cgcatctgcc cggcgccgtg
     1021 cgaggccgcg tgcgtgctcg acatcaacga cgacgccgtc acgatcaagc agatcgagca
     1081 gcggatcatc gaccacgcct tcgaggaggg ctgggtcaag cccgagccgc cggcgttccg
     1141 caccggccgc acggccgcgg tgatcggctc cggccccgcc ggcctggcgg ccgcggccga
     1201 gctgaacacg gcgggccacc aggtcacgct gtacgagcgc aacgaccgca tcggcggcct
     1261 gctgcgctac ggcgtgcccg acttcaagct cgacaagggc gtggtgcagc ggcgcgtgga
     1321 catcctcgcc gccgagggca tcgagatggt caccggcgtg gaggtgggca aggacatctc
     1381 cgcggccgag ctgcgcgagc gcttcgacgc gatcgtgatc gccaccggct ccaccgttcc
     1441 gcgcgacctt cccgtgccgg gccgcgagct cgacggagtg cacttcgcga tggagtacct
     1501 cgagcagcgc aaccgcttcg tggcgggcga cgatccggcg gagaagccga tcagcgccgc
     1561 cggcaagcac gtggtgatca tcggcggcgg cgacaccggc gccgactgcc tcggcaactc
     1621 gcaccgcgag cggcccgcct cgatcaccca gttcgagctg ctgcccgagc cgccgccgga
     1681 gcgccccgag gacatcacgc cgtggccccg ctggccgctc atcctgcgca cgtccggcgc
     1741 ccacgaggag ggcggcgagc ggcgctacag cgtcatgacc acccacctca ccggcgagga
     1801 cgggcgcgtc acgcacctgc acgggcacga ggccggcccg ccgccctcgt tcgacaagat
     1861 cgagggcagc gagttcacga tcccggccga cctcatcctg ctggcgatgg gcttcctgca
     1921 cccgcagcac gagggcctcg tggagcagct cggagtgaag ctcgaccagc gcggcaacgt
     1981 cgagggcccc gagttcgcca cctccgagcc gggcgtgttc gccgcgggcg acgcgcgccg
     2041 cgggcagtcg ctcgtggtgt gggccatcgc cgaggggcgc caggcggccc gcgccgccga
     2101 cacctacctc cagtcgctcg gcgagcccga gggcgaagag ctggtggccg taccggcgta
     2161 ggctgccggt atggcgtacc tcaagcccaa ctcgttcaca cgcaaggtct tcaacccgct
     2221 tgccatgcgc ttcggcatcg gcggctccga gaagctcatg gttgcgggcc gcaagagcgg
     2281 cgagatgcgg cacgtgccgg tcatcccggt ggagcacgac ggtacgcgct acatcgtgtc
     2341 cactc
//
LOCUS       DASSYW010000102         2033 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1618847, whole genome shotgun sequence.
ACCESSION   DASSYW010000102 DASSYW010000000
VERSION     DASSYW010000102.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2033)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2033)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2033
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1618847"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..584)
                     /locus_tag="VFN38_01640"
     CDS             complement(<1..584)
                     /locus_tag="VFN38_01640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HET9010481.1"
                     /translation="MALGDFFKKQFIDVIHWTESEDDVLAERYPMQDMEIQYGAQLTV
                     RESQMALFVNEGKFADAFAPGLYTLETRTLPLLTNLQNWDKMFQSPFKSDVYFFSTRT
                     RTAQRWGTQSPITIRDRDFGMVRLRAFAMYSFHVENPVAFMSKVSGTRDVYRVADLEP
                     HLRNLVVTTMSQAFAESQVPFLDMAASTGTLAST"
     gene            728..2020
                     /locus_tag="VFN38_01645"
     CDS             728..2020
                     /locus_tag="VFN38_01645"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HET9010482.1"
                     /translation="MDDSRPATNEREAPSRLAALLAAELRRARTDVVRRWLDRIVARV
                     RIDQNQVFPTDELLDHVPLLVDGIAEYLESDGRALDGHFAVEAKAMELGALRHAQGFD
                     AYQILKEHEILAGILFTFLGDALTRVAPPGVTPADVAQVWRRVAEAIDEIRQATMTHF
                     LRVSAEQVRQREERLRRLNRMVSHELKNRVGAIRGASTLLAEPWLEPDQRERFLRIIA
                     QNGEGLQRVLENLTALTRLDGDSRRHRNVLLPQAAAEVVRQLRDAAKLGQVEVHVDRE
                     IPAVEVDAAAVELCLANYVSNAIKYADPRKTPRTVQISGELIVPTPTREGELIVRVRD
                     NGLGVPLTSREHLFEQFFRAHGETVSAEGSGLGLNIVQETVASLGGRTWAEFPEEGGS
                     VFAFSLPSRREEDAAAAGTRRPDVAAAQGPPSETPAAG"
BASE COUNT          311 a          653 c          774 g          295 t
ORIGIN      
        1 atcgtcgagg cgagcgtgcc cgtgctggcc gccatgtcca ggaagggcac ctggctctcg
       61 gcgaatgcct gcgacatggt cgtcacgacg aggttgcgca ggtgcggctc gaggtcggcg
      121 acgcggtaga catcgcgcgt cccgctcacc ttcgacatga aggcgaccgg gttctcgacg
      181 tggaagctgt acatggcgaa ggcgcgcagg cgcaccatcc cgaagtccct gtcgcggatg
      241 gtgatcgggc tctgcgtccc ccaccgctgc gccgtgcggg tgcgggtgga gaagaagtag
      301 acgtcggact tgaaggggga ctggaacatc ttgtcccagt tctggagatt cgtgaggagg
      361 ggcagggtgc gcgtctccag ggtgtagagg ccgggcgcga aggcgtcggc gaacttccct
      421 tcgttcacga acagcgccat ctgcgactcg cgcacggtga gctgggcgcc gtactggatc
      481 tccatgtcct gcatcgggta ccgttcggcg aggacgtcgt cctcgctctc ggtccagtga
      541 atgacgtcga tgaactgctt cttgaagaag tcgccgagtg ccatgacgca gctccgagcc
      601 ggtgtgagat gggtgaatgt ggagcgcggc ggatgcacgc gaaagaggac ggggagggcg
      661 cgccggcggc actctggccc tattctatag gatgaaggcg cagtctcact ccggggagga
      721 tggaccgatg gacgacagcc gtccggcgac caacgagcgc gaggccccct cgcggctcgc
      781 cgcgctcctt gccgcggagc ttcgtcgcgc gcgcacggac gtcgtgcgcc ggtggctcga
      841 ccgcatcgtc gcgcgggtgc ggatcgacca gaaccaggtc ttccccaccg acgagctgct
      901 cgaccacgtg ccgctcctgg tggacgggat cgccgaatac ctggaatcgg atgggcgcgc
      961 cctcgacggg cacttcgccg tcgaggcgaa ggcgatggag ctgggcgcgc tgcgccacgc
     1021 gcaggggttc gacgcgtacc agatcctgaa ggagcacgag atcctcgccg ggatcctctt
     1081 caccttcctg ggcgacgcgc tcacccgggt ggcgccgccg ggcgtcactc cggccgacgt
     1141 cgcccaggtg tggcggcgcg tggccgaggc gatcgacgag atccggcagg cgacgatgac
     1201 gcacttcctg cgcgtgtcgg ccgagcaggt gcggcagcgc gaggagcggc tgcgccggct
     1261 caaccggatg gtgtcgcacg agctgaagaa ccgggtcggc gccatccgcg gcgcctccac
     1321 cctgctggcc gagccctggc tggagccgga ccagcgcgag cggttcctcc gcatcatcgc
     1381 gcagaacggc gaggggctgc agcgggtgct ggagaacctc acggcgctca cgcgcctgga
     1441 cggcgactcg cgccgccacc gcaacgtgct gctgccgcag gcggcggccg aggtggtgcg
     1501 ccagctgcgc gacgcggcga agctggggca ggtggaggtc cacgtggacc gggagatccc
     1561 cgcggtggag gtggacgccg ccgcggtgga gctctgcctg gccaactacg tctcgaacgc
     1621 gatcaagtac gccgaccccc ggaagacgcc gcggacggtc cagatctccg gagagctgat
     1681 cgtccccacg ccgacgcgcg aaggggagct gatcgtgcgc gtgcgcgaca acgggctggg
     1741 cgtccccctc acgtcgcgcg aacacctgtt cgagcagttc ttccgcgccc acggcgagac
     1801 ggtgagcgcc gaagggtcgg ggctggggct caacatcgtg caggagacgg tcgcatcgct
     1861 gggcgggcgg acctgggccg agttcccgga ggaggggggg agcgtgttcg cgttctcgct
     1921 cccgtcgcgg cgcgaggagg atgcggcagc ggctgggacg cgccggccgg atgtggcggc
     1981 ggcgcagggg cctccgagcg agacgccggc ggcgggctga gcgtcgggcc tac
//
LOCUS       DASSYW010000103         2355 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_734764, whole genome shotgun sequence.
ACCESSION   DASSYW010000103 DASSYW010000000
VERSION     DASSYW010000103.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2355)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2355)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2355
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_734764"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..592)
                     /locus_tag="VFN38_01650"
     CDS             complement(<1..592)
                     /locus_tag="VFN38_01650"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HET9010483.1"
                     /translation="MSVGSVPFREVIVRRHFPALDGLRAVAVMIVIVGHHGYPIAGVP
                     ADLGVSAFFVLSGFLITRLLMREHEASGTITLREFYARRTLRIFPAYYTFLLVSFVLD
                     HLRGERWGTALGLSAVTYTVNYFNAIHHHPSTSIAHAWSLGVEEQFYLLWPLGFLLLA
                     RRGSRALVEGVALAALAAVAWRAWLMLHGADVAYLYN"
     gene            complement(874..1293)
                     /locus_tag="VFN38_01655"
     CDS             complement(874..1293)
                     /locus_tag="VFN38_01655"
                     /inference="COORDINATES: protein motif:HMM:NF023697.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3618 domain-containing protein"
                     /protein_id="HET9010484.1"
                     /translation="MAETPADVRRDIELTRNRISDTLQELEQKMNVAQIVKDNPWPAL
                     VLAVGAGVLLSGSKADVKAAAATVVATKGASSRLGGVLDEIVSQVVSGFHGAIEQKIE
                     GLASDVKRAIGAPRTRTPSSSYGAGTTAEVSVVPRAD"
     gene            complement(1251..1682)
                     /locus_tag="VFN38_01660"
     CDS             complement(1251..1682)
                     /locus_tag="VFN38_01660"
                     /inference="COORDINATES: protein motif:HMM:NF018980.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HET9010485.1"
                     /translation="MTVDPRTDGRRGLGALLRDLAEGSAELVRGEVRLARLELGTAAA
                     AAGRGTAFVAVGGVLLLLGTLATFTGLVLLIGDQWLPRDLYWVGALLFALITGGVAAW
                     LAHRGRSALSPASLAPHQTVATLKEDKEWLKHPLTSGATSS"
     gene            complement(1693..2280)
                     /locus_tag="VFN38_01665"
     CDS             complement(1693..2280)
                     /locus_tag="VFN38_01665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010486.1"
                     /translation="MERNANDTFGSSNMGESTSGGFGGSTGSAGSANSPSSFGAASTG
                     STGASDASFSRDSSTDASGLADRAKSAANTAGEKLSDVGSSVRDRAGSLKNTLADALE
                     SGAEKLRSQGAGGGQIAGASATGGSTAMVGEGNRLGEATNQLAGGLQASADWLRDADL
                     DGLKSGIERQVKEHPGRTLAVAVGLGYLLGKAIRK"
BASE COUNT          355 a          816 c          829 g          355 t
ORIGIN      
        1 cattgtacag atacgctacg tccgcaccgt gcagcatgag ccaggcgcgc cacgccacgg
       61 ccgccagtgc cgcgagcgcg actccctcga cgagcgcgcg actgccgcgg cgagcgagca
      121 gcaggaagcc caacggccag agcaggtaga actgttcctc gacgcccagc gaccacgcat
      181 gcgcaatgga cgtcgatgga tgatggtgaa tcgcgttgaa gtagttgacc gtgtaggtaa
      241 cggcactcag tccgagcgcc gtgccccacc gctctccccg caggtgatcg agcacgaagc
      301 tgaccagcag gaacgtgtag taggcgggaa agattcgcag cgttcgccgg gcgtagaatt
      361 cacgcagggt tatcgtgccc gatgcctcgt gctcgcgcat gagaaggcgc gtgatgagaa
      421 acccgctcag cacgaagaag gcgctgaccc cgaggtcggc gggtacgccg gcaatcggat
      481 agccgtgatg cccgacgatg acgatcatga ccgccacggc gcgcaggccg tcgagcgccg
      541 ggaagtgccg gcggacgatg acctcgcgaa agggaacgct gcctactgac acgacccacc
      601 catcgtggcg atcgggactg gatttcgtgt ggaggagact cgtgctctgc ccgcggacac
      661 gatacgccgc gactgcgccc gtgcccagag ggtacactca ggccgccggg ccgccagggg
      721 ttccggtgtg cggcgccggc gtctgcacgg tcgggccggt cacgcgagca gcccgccagc
      781 tggttggctg acgggctgct gggccgacgg ggtagttcgt gttcgcgcga ccgggagctg
      841 gttcgcctgg tcgtcgtcgg tgcctgctcg tcgtcagtcc gcgcgcggta ccaccgagac
      901 ttcggccgtg gtacctgcgc cgtacgacga cgacggcgtc ctggtcctcg gcgcgccgat
      961 cgcgcgcttc acgtcgctcg ccagtccctc gatcttctgc tcgatcgcgc cgtggaagcc
     1021 ggacacgacc tgcgacacga tctcgtcgag cacgccgccg agacggctgc tcgcgccctt
     1081 cgtcgccacg accgtcgcgg cggcggcctt cacgtcggcc ttggagccgc tgagcagcac
     1141 gcccgcgccc acggcgagca cgagcgccgg ccacgggttg tccttcacga tctgcgcgac
     1201 gttcatcttc tgctcgagct cctgcagcgt gtccgagatc cggttgcgcg tcagctcgat
     1261 gtcgcgccgg acgtcagcgg gtgtttcagc cattccttgt cctccttgag cgtcgcgacc
     1321 gtctggtgcg gcgcgagcga agccggcgag agcgccgagc gcccccgatg tgcgagccag
     1381 gcggcgacgc cgccggtgat gagagcgaac agcagtgcgc cgacccagta gagatcgcgc
     1441 ggcagccact ggtcgccgat gagcagaacg agtccggtga acgtcgcgag ggtgccgagc
     1501 aggagcagca cgcccccgac cgcgacgaaa gcggttccgc gccccgcggc cgcggcggcc
     1561 gtaccgagct cgaggcgggc gagccgcact tcaccgcgta cgagctcggc actcccctcc
     1621 gcgagatcgc ggaggagggc gccaaggccg cgacggccgt cggtcctggg atcgaccgtc
     1681 acgggatcca ccttacttgc ggatggcctt gccgagcagg tagccgaggc cgacggccac
     1741 ggccagcgtg cggcccggat gctccttcac ctgacgctcg atgcccgact tcaggccgtc
     1801 gagatcggcg tcgcgcagcc agtcggccga ggcctgaagg ccgccggcga gctggttggt
     1861 ggcttcgccg aggcgattgc cctcgccgac catggccgtg ctgccgccgg tcgccgaggc
     1921 gcccgcgatc tgcccgccgc ccgcaccctg ggagcgcagc ttctcggcgc ccgactccag
     1981 cgcgtcggcg agcgtgttct tgagggagcc ggcgcggtcg cggaccgagg agccgacatc
     2041 gctcagcttc tcgccggcgg tgttcgcggc gctcttcgcg cgatcggcca ggccgctcgc
     2101 gtcggtgctg ctgtcgcgcg agaagctcgc atcggaggct cccgtgctgc ccgtgctcgc
     2161 ggcgccgaag ctggagggcg agttcgcgct ccccgccgag ccggtgctgc cgccgaatcc
     2221 accggacgtg gactcgccca tattgctgct accgaaggtg tcgttcgcgt tgcgttccat
     2281 atccgtctcc gccgtgtgag tccgacttgc tgagggccga cagggagtgc agaggccgtg
     2341 ccgtcgagaa gggga
//
LOCUS       DASSYW010000104         2333 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1545168, whole genome shotgun sequence.
ACCESSION   DASSYW010000104 DASSYW010000000
VERSION     DASSYW010000104.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2333)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2333)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2333
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1545168"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            300..986
                     /locus_tag="VFN38_01670"
     CDS             300..986
                     /locus_tag="VFN38_01670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010487.1"
                     /translation="MSGLGLAAFGVYAFVAAALGDGYRYTEDGADYLSPFYSPDLAGW
                     GLDVPFSSAFLVIWVPLAFRATCYYYRKAYYRSFFLSPPACAVAPRKGRYRGEVALPY
                     VLMNAHRYFLFLATVVLGFLWYDAVRAFIFDGSFGVGVGSLVLLANAILLSLFTFGCN
                     SVRHLVGGKLDCFTCSARAQTRHKLWRGVGVLNGRHMEWAWISLVWVGLADLYIRLAA
                     AGVFDDPRII"
     gene            987..>2333
                     /locus_tag="VFN38_01675"
     CDS             987..>2333
                     /locus_tag="VFN38_01675"
                     /inference="COORDINATES: protein motif:HMM:NF013086.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HET9010488.1"
                     /translation="MQRHDYDVVVIGAGGAGLRAAIAAAEAGARTALVCKSLLGKAHT
                     VMAEGGVAASFGNVAPEDSWQVHFQDTMFGGKYLNNWRMAELHAREAPDRVRELERWG
                     GVFDRTPDRKMSQRAFGGHTHKRLVHIGDRTGLELIRTLQDKAVHSGIDVYMECTISR
                     LLKDGERVCGAFGYWRATGEFVRFAAGAVVLATGGAGKCWRITSNSWECTGDGHALAY
                     EAGAELVDMEFVQFHPTGMVWPPGVVGLLVTEAVRGEGGILRNATGERFMERYDSKRL
                     ELSTRDVVARAIFTEVKERRGTPHGGVFLDVSHLGDATVRKKLPSMYEQFKELAGVDI
                     TREAMEVGPTCHYFMGGVRVDAETGQSTVEGLFAAGECSGGMNGANRLGGNSLSDLLV
                     FGKRTGESAAREAGGARPPRIDDAQMADAEAEMTGYLSRSRGEGGILRNATGERFME"
BASE COUNT          324 a          799 c          848 g          362 t
ORIGIN      
        1 ggcgtcacgc gcgtctccac acgcaggtgc tcgaacgccg ccagcctgcc ggtgagcgag
       61 accaggccga ccttcggccc gcccgtgccg aggtcgatcg cgagcacgca cgacatgacg
      121 cgaccgtaga gggccgcgga gagccggcca tcggcgccgc accgcgttca ggctgcggcg
      181 aattactgaa ccggagcctg gccgccggga gtagcgttcg ggccggcgtg gcgacagaga
      241 ccgcacctcg gaggacattc gacacggcgc gccgggaccg ctggtggctc gcgccgctcg
      301 tgtccggcct cggcctggcg gccttcggcg tctacgcgtt cgtggccgcc gcgctcggcg
      361 acggctaccg gtacaccgag gacggcgcgg actacctctc gccgttctac tcgcccgacc
      421 tggcggggtg ggggctggac gtcccgttct cctcggcctt cctcgtcatc tgggtgccgc
      481 tggccttccg ggcgacgtgt tactactacc gaaaggcgta ctaccggtcg ttcttcctct
      541 ctccgcccgc ctgcgccgtg gccccgcgca agggccgcta ccgcggtgag gtggcgttgc
      601 cctacgtgct gatgaacgcc caccgctact tcctgttcct ggccacggtg gtgctcgggt
      661 tcctgtggta cgacgccgta cgcgcgttca tcttcgacgg gtcgttcggt gtcggcgtcg
      721 gctcgctggt gctgctcgcc aacgcgattc tgctgtcgct gttcacgttc ggctgcaact
      781 cggtccgcca cctggtcggc ggcaagctcg actgcttcac ctgttcggcg cgcgcgcaga
      841 cccgccacaa gctgtggcgc ggcgtcggcg tgctcaacgg caggcacatg gagtgggcgt
      901 ggatcagcct ggtctgggtc gggctcgccg atctctacat ccgcctggcg gcggccggcg
      961 tcttcgacga cccgaggatc atctgagtgc aacgccacga ctatgacgtg gtcgtgatcg
     1021 gcgccggcgg cgccggcctg cgggccgcga tcgccgccgc ggaggccggg gcgcggaccg
     1081 cgctcgtgtg caagtcgctg ctcggcaagg cccacaccgt gatggcggag ggcggcgttg
     1141 ccgcgtcgtt cggcaacgtc gcgcccgagg acagctggca ggtgcacttc caggacacga
     1201 tgttcggcgg gaagtacctc aacaactggc gcatggccga gctgcacgcg cgcgaggctc
     1261 cggaccgcgt gcgcgagctc gagcgatggg gcggcgtctt cgaccgcacg cccgatcgca
     1321 agatgtcgca gcgtgcgttc ggtgggcata cccacaagcg cctcgtgcac atcggcgacc
     1381 gcaccggcct cgagctgatc cgcaccctgc aggacaaggc cgtgcactcc ggcatcgacg
     1441 tctacatgga atgcacgatc tcccggctgc tcaaggacgg cgagcgcgtc tgcggcgcgt
     1501 tcggctactg gcgcgcgacg ggcgagttcg tccgcttcgc ggcgggcgcc gtcgtgctcg
     1561 caaccggcgg cgccgggaag tgctggcgga tcacgtccaa ctcctgggag tgcaccggcg
     1621 acgggcacgc gctcgcgtac gaggcgggcg ccgagctcgt cgacatggag ttcgtgcagt
     1681 tccatccgac cggaatggtg tggccgcctg gcgtcgtcgg cctgctcgtc accgaggcgg
     1741 tgcgcggcga gggaggcatc ctgcgcaacg cgaccggcga gcggttcatg gagcgctacg
     1801 actcgaagcg gctcgagctg tcgacgcgcg atgtcgtggc gcgcgcgatc ttcacggagg
     1861 tcaaggaacg ccgcggcacg ccgcacggcg gtgtcttcct cgacgtgtcg catctcggcg
     1921 acgcgaccgt gcgcaaaaag ctgccgagca tgtacgagca gttcaaggag ctcgccggcg
     1981 tcgacatcac gcgcgaggcg atggaggtcg gcccgacctg ccactacttc atgggcggcg
     2041 tccgggtcga tgcggagacc ggtcagagca cggtcgaggg tctcttcgcg gccggcgagt
     2101 gctcgggcgg gatgaacggc gccaaccggc tcggcggcaa ctcgctctca gacctgctcg
     2161 tgttcggcaa gcgcacgggg gagagcgccg cgcgcgaagc cggaggcgcg cgaccgccgc
     2221 ggatcgacga cgcgcagatg gccgacgccg aggcggagat gacgggctac ctgtcgcgct
     2281 cgcgcggcga gggaggcatc ctgcgcaacg cgaccggcga gcggttcatg gag
//
LOCUS       DASSYW010000105         2231 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1471278, whole genome shotgun sequence.
ACCESSION   DASSYW010000105 DASSYW010000000
VERSION     DASSYW010000105.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2231)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2231)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2231
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1471278"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..264)
                     /locus_tag="VFN38_01680"
     CDS             complement(<1..264)
                     /locus_tag="VFN38_01680"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HET9010489.1"
                     /translation="MASFDVIFLGGGPAGYVGAIRCAQLGLNTAVIEREGLGGTCVLW
                     GCIPAKALLEAASFAEKMKKAPEFGVTPGEVKLDFGVAMKRSRA"
     gene            complement(286..1632)
                     /locus_tag="VFN38_01685"
     CDS             complement(286..1632)
                     /locus_tag="VFN38_01685"
                     /EC_number="2.3.1.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR01349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045254 - pyruvate dehydrogenase complex
                     [Evidence IEA];
                     GO_function: GO:0004738 - pyruvate dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0004742 - dihydrolipoyllysine-residue
                     acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase complex dihydrolipoamide
                     acetyltransferase"
                     /protein_id="HET9010490.1"
                     /translation="MATKVFMEALSPTMEEGRLVKWLKNEGDAVKSGEPLGEVETDKA
                     IMELVARGDGVLRKRLVNEGDAVPVGTLVGVIAAKDENIDALVSGAAAAPAAAGAAAA
                     PAAPAPAANAQQSTGPSQAAPAAPPQRPAQQVPPSPPQPAPAAAQPAASGNGEHVRSS
                     PLARRLATERGVNLGSVQGSGPGGRIIKRDIEAAATSGAPAGAVATPSRPSVVPSSRP
                     SFEGDYKDVPLTQIRKIIAKRLGESIGPIPTFYLTAELDLTRVMEMRGAMAELGDEYK
                     VSVNDVLLKAIAVALSQHPEVNAHWLGDHIRYFNRVHLGMAVATDDGLIVPVIWDADT
                     KGLATISREAKELAKRARERKLKPEEFTGSTFSVSNLGMFGIDQFTAIINPPEAGIIA
                     IGTGEDKLVVVDGEPVVRKRVRLTMSCDHRIIDGAVGAKFLQTLRRLVENPLMLVY"
     gene            complement(1647..>2231)
                     /locus_tag="VFN38_01690"
     CDS             complement(1647..>2231)
                     /locus_tag="VFN38_01690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase C-terminal domain-containing
                     protein"
                     /protein_id="HET9010491.1"
                     /translation="WESWLAHIPGLKVIAPGTPYDAKGLLKSAIRDDNPVCVLEGEML
                     YNTKGEVPEDDYVIPLGKADLKREGDHCSIITHGKMVLVAMQAADQLAKEGIRIDVVD
                     LRTVRPIDVDAITASVNKTNRAVVLEEGWAVCGVGAQVVDYIQRECFDNLDAPVVRVH
                     QEDVPMPYAKSLEKAAKPDLPKTIAAVRKVMYLD"
BASE COUNT          303 a          777 c          773 g          378 t
ORIGIN      
        1 ggcgcgcgag cgcttcatcg ccacgccgaa gtcgagcttc acctcgccgg gcgtgacgcc
       61 gaactccggc gccttcttca tcttctcggc gaacgacgcc gcttcgagca gcgccttggc
      121 cgggatgcac ccccacagca cgcaggtgcc gccaagcccc tcgcgctcga tgaccgcggt
      181 gttgaggccg agctgggcgc accggatcgc gcccacataa ccggcgggtc cgccgccgag
      241 gaagatcacg tcgaaggaag ccatgttggc gtgtatgcgt gcgggttagt agacgagcat
      301 gaggggattc tcgacgagcc gtcgcagcgt ctgcaggaac ttcgcgccga ccgcgccgtc
      361 gatgatgcga tgatcgcagc tcatggtgag ccggacgcgc ttgcgcacga cgggctcgcc
      421 atccacgacg acgagcttgt cctcgccggt gccgatggcg atgatccccg cctcgggcgg
      481 gttgatgatc gccgtgaact ggtcgatgcc gaacatgccg aggttgctca ccgagaaggt
      541 cgagccggtg aactcctcgg gcttgagctt ccgctcgcgg gcgcgcttcg ccagctcctt
      601 cgcctcgcgc gagatcgtgg cgagcccctt cgtgtcggcg tcccagatca cggggacgat
      661 gagaccgtcg tcggtggcca cggccatgcc gaggtggacg cggttgaaat agcggatgtg
      721 atcgcccagc cagtgggcgt tcacctccgg gtgctgcgac agggccaccg cgatcgcctt
      781 cagcagcacg tcgttgaccg acaccttgta ctcgtcgccc agctccgcca tggcgccgcg
      841 catctccatc acgcgggtca ggtccagctc cgccgtgaga tagaaggtcg ggatgggccc
      901 gatcgactcg ccgaggcgct tggcgatgat cttccggatc tgcgtgagag ggacgtcctt
      961 gtagtcgccc tcgaacgacg gacgggagga cgggacgacg gagggacggg aaggcgtggc
     1021 aacggcgccc gccggcgcgc cgctcgtggc ggcggcctcg atgtcgcgct tgatgatgcg
     1081 gccgccgggc cccgagccct gcacgctgcc gaggttcacg ccgcgctcgg tggcgaggcg
     1141 ccgcgccagc ggcgatgagc gcacatgctc gccgttgccc gacgccgcgg gctgcgccgc
     1201 cgcgggtgcg ggctgtggcg gcgagggcgg cacctgctgc gccggacgct gcggcggcgc
     1261 cgcgggcgcc gcctgcgacg gccccgtgct ctgttgcgcg ttggccgccg gcgcgggagc
     1321 tgccggagcc gccgcggcgc cggccgccgc cggcgctgcc gccgcaccgc tcacgagcgc
     1381 atcgatgttc tcgtccttgg ccgcgatgac gccgacgagc gtgcccaccg gaaccgcgtc
     1441 gccctcgttg accaatcgct tgcgcagcac gccgtcgccg cgggcgacga gctccatgat
     1501 cgccttgtcc gtctcgactt cgccgagcgg ctcgccgctc ttcacggcgt cgccttcgtt
     1561 cttgagccac ttgaccaggc gtccctcctc catcgtgggg gagagcgcct ccatgaagac
     1621 cttggttgcc atgatcggtg ttcccgtcag tcgaggtaca tgactttgcg gaccgcggcg
     1681 atcgtcttcg gcaggtccgg cttggcggcc ttctcgaggc tcttcgcgta cggcatcggg
     1741 acatcttcct ggtgcacgcg cacgaccggc gcgtccaggt tgtcgaagca ctcgcgctgg
     1801 atgtagtcca ccacctgcgc gcccacgccg cacaccgccc agccctcctc gagcacgacg
     1861 gcgcggttgg tcttgttcac cgaggcggtg atggcgtcca cgtcgatcgg gcgcacggtg
     1921 cggaggtcca ccacgtcgat gcggatgcct tccttcgcga gctggtcggc ggcctgcatc
     1981 gccacgagca ccatcttgcc gtgcgtgatg atggagcagt ggtcgccctc gcgcttcagg
     2041 tcggccttgc cgagcggaat gacgtaatcg tcctcgggca cttcgccctt ggtgttgtac
     2101 agcatctcgc cctcgagcac gcacaccggg ttgtcgtcgc ggatggcgct cttgaggagc
     2161 cccttcgcgt cgtacggcgt gcccggggcg atgaccttga ggccgggaat gtgggcgagc
     2221 cacgactccc a
//
LOCUS       DASSYW010000106         4693 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_697247, whole genome shotgun sequence.
ACCESSION   DASSYW010000106 DASSYW010000000
VERSION     DASSYW010000106.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4693)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4693)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4693
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_697247"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..494)
                     /locus_tag="VFN38_01695"
     CDS             complement(<1..494)
                     /locus_tag="VFN38_01695"
                     /inference="COORDINATES: protein motif:HMM:NF014307.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)(+) transhydrogenase (Re/Si-specific)
                     subunit beta"
                     /protein_id="HET9010492.1"
                     /translation="MRENITQLTYLAASVLFILGLRSLTRPDRARRGMQQAAVGMLLA
                     LCGTLMNHQIVDYRWIAGGLVLGAIIGYPLGMWVPTTALPQRIAFSLSFGALAATLVG
                     VAEYYSTYHGGEGHIGAAKMAALGFEVLLGSLTVTGALIAAGKLQEWISSQPMTYRGQ
                     NLVN"
     gene            complement(498..800)
                     /locus_tag="VFN38_01700"
     CDS             complement(498..800)
                     /locus_tag="VFN38_01700"
                     /inference="COORDINATES: protein motif:HMM:NF024179.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P) transhydrogenase subunit alpha"
                     /protein_id="HET9010493.1"
                     /translation="MLILELYVFILAGFVGFMVITRVPPLLHTPLMSATNAISGISLV
                     GSMVAAGANRGGVATALGFIAVVCATTNVVGGFLITDRMLKMFRRDPHDDASKGKP"
     gene            complement(805..1920)
                     /locus_tag="VFN38_01705"
     CDS             complement(805..1920)
                     /locus_tag="VFN38_01705"
                     /EC_number="1.6.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF006942.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008746 - NAD(P)+ transhydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit alpha"
                     /protein_id="HET9010494.1"
                     /translation="MRIAVPLETAAGEQRVALTPDSAGRLVKGGHEVRVQAGAGTRAG
                     FPDSAYESAGASVVDAASVYADAALVCRVLAPTQAEVAKLPSGCTLLALLAPSRNGPL
                     LATLAARGVTALALEQVPRITRAQSMDVLSSQSTVAGYKAVLVGASALPKFLPMLTTA
                     AGNVSPARVFVIGAGVAGPQAIATARRLGGVVSAFDVRPAAREQVQSLGASFVAAELV
                     GADAQTTGGYARAQSDDEAKRTREALANHLREVDLVITTAQIPGRPAPRLVTAEMVTQ
                     MRPGAVIIDLAAESGGNCELTIAGETVRSGNVTILGPVDLPATVPYHASQMFGKNILA
                     LVTHLTHEGSLHLDRNDEITSAMTVVRDGQVVVPPPK"
     gene            2066..3787
                     /locus_tag="VFN38_01710"
     CDS             2066..3787
                     /locus_tag="VFN38_01710"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HET9010495.1"
                     /translation="MSSARLAVVPLFVALLLVSACTAQMSAPARATPGGELPLKLAPR
                     PTTGDITPADLMTRLYIFADDSMMGRQVGTEYNLKGTAYIEREVRRLGLVPAGTDGYF
                     QNLPLFSYATDSTSTVRVAGQTLVRGTDYLVYPQGEARLALDGMPVVAGGSAADSATW
                     IPADAAAGRIVVLTVPTTSNPIRVFSGSSRFGRAAALVIVSLDRLAPNVQRFIAHRTG
                     LRAEDAPLPGPPSIFVTPRVAASLFGGAVDAVSPGTAGRALEGTLILHQAQGPGRNVV
                     AILPGSDPVLKNQYVAIGAHNDHIGFNNSPVDHDSIRAFNMVARVQGADSPRPGTLTP
                     EQTARIRAITDSLHALHPARRDSINNGADDDGSGSVSVLEIAEALATSPTKPKRSILF
                     VWHTGEEAGLWGSQHFTDHPTVPRDSIVAQLNMDMVGRGAATDVTGELKEGGLARGGP
                     GYVQLIGSRRLSTELGDLIERVNRDERLGLAFDYSQDANGHPQNIYCRSDHYEYARYG
                     IPIVFVTTGGHSDYHQVTDEPQYIDYGRMAQVATLVRDAAVAVANLDHRVVVDKAKPD
                     PKGRCVQ"
     gene            3910..4368
                     /locus_tag="VFN38_01715"
     CDS             3910..4368
                     /locus_tag="VFN38_01715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010496.1"
                     /translation="MRRFSLLLLLPLAACAPLFRRGGSEATPPASFVRSTAELRSTRM
                     IEVREGLTKPDAMKLVADALGERYVVEVADPNAGFTMTSWRSTMSREGVPDLRYRTRL
                     VTRFLGDDWRRLQVRSEANWARADEWDIGYDVAQLDTASRALRERLSPRP"
     gene            complement(4372..>4693)
                     /locus_tag="VFN38_01720"
     CDS             complement(4372..>4693)
                     /locus_tag="VFN38_01720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010497.1"
                     /translation="GSVESAIHRYARGIESQAVDKLKEAYPGLTDEQQKAWEMAWAKA
                     TRLKATVADLKVTGTDGDQADADFQLNVTYEWGDGSRGVNPPQRQHAQLRRTPNGWQL
                     VSVR"
BASE COUNT          722 a         1668 c         1605 g          698 t
ORIGIN      
        1 aagttgacga gattctgtcc gcggtaggtc atcggctgcg aggaaatcca ctcctgcagc
       61 ttgcccgcgg cgatcagcgc accggtcacg gtcagggagc cgagcagcac ctcgaagccg
      121 agcgcggcca tcttggcggc gccgatgtgg ccttcaccgc catgataggt ggagtagtac
      181 tccgcgacgc ccacgagcgt cgccgccagc gcgccgaagc tgagcgagaa cgcgatgcgc
      241 tgcgggagcg ccgtcgtcgg cacccacatg ccgaggggat agccgatgat cgcgccgagg
      301 acgaggccgc ccgcgatcca gcgatagtcg acgatctggt ggttcatcag cgtgccgcac
      361 agcgcgagca gcatgccgac cgccgcctgc tgcatgccgc ggcgcgcacg gtcggggcgc
      421 gtgagactgc gcagcccgag tatgaagagg acggacgcgg cgagatacgt gagctgcgtg
      481 atgttctcgc gcatgtccta cggcttcccc ttggaggcgt cgtcgtgcgg gtcgcgccgg
      541 aacatcttga gcatgcggtc ggtgatcagg aatccgccga ccacgttcgt cgttgcgcag
      601 acgacagcga tgaagccgag ggcggtggcc acgcccccgc ggttcgcgcc ggccgccacc
      661 atcgagccga cgagcgagat gccggagatg gcgttcgtgg cggacatcaa tggcgtgtgc
      721 aggaggggcg gcacccgcgt gatcaccatg aagccgacga agccggcgag gatgaagacg
      781 tagagctcga ggatcagcat cgcgtcactt gggaggaggc acgacgacct ggccgtcgcg
      841 cacgacggtc atcgccgagg tgatctcgtc attccggtcg agatggagcg acccttcgtg
      901 ggtcaggtgc gtgacgagcg ccaggatgtt cttgccgaac atctggctgg cgtggtacgg
      961 cacggtggcc ggcaggtcga ccggccccaa aatggtcacg ttgcccgacc gcaccgtctc
     1021 gccggcgatc gtgagctcgc agttgccgcc ggattccgcc gcgaggtcga tgatcaccgc
     1081 gccggggcgc atctgcgtca ccatctccgc cgtgacgagc cgtggcgccg gccggccggg
     1141 gatctgggcc gtggtgatga cgaggtccac ttcgcgcagg tgattggcga gcgcctcgcg
     1201 cgtgcgcttc gcctcgtcat cgctctgcgc acgcgcgtag ccgccggtgg tctgggcatc
     1261 ggcgcccacg agttccgcgg ccacgaagga ggcgccgagc gactgcacct gctcgcgcgc
     1321 ggcagggcgc acgtcgaacg ccgagaccac cccgcccagt cggcgcgccg tggcgatcgc
     1381 ctggggcccg gccacgccgg cgccgatcac gaacacccgt gccggcgaca cgttgcccgc
     1441 ggccgtcgtg agcatgggaa ggaacttggg cagcgcgctc gcgccaacga gcaccgcctt
     1501 gtagccggca acggtgctct gcgacgagag cacgtccatc gactgggcgc gcgtgatgcg
     1561 cggcacctgc tcgagcgcga gcgccgtcac gccgcgcgcg gcgagcgtgg cgaggagggg
     1621 cccgttgcgc gacggcgcga gcaacgcgag cagcgtgcat ccgctcggca gcttcgcgac
     1681 ctcggcctgg gtcggcgcca ggacgcgaca caccagcgcg gcgtcggcat acaccgacgc
     1741 cgcgtccacg acgctcgcgc cggccgattc gtacgccgaa tcgggaaagc cggcgcgggt
     1801 gccggcgccg gcttgaacgc gtacctcgtg cccacccttc accagtcgtc ccgcgctgtc
     1861 gggcgtgagg gcgacgcgct gctcgcccgc ggcagtctcg agaggaacgg cgattcgcat
     1921 gaagggaaaa agtagcgtcg ggacggatgg atgccagtga gaatgcccgt gtgcctcatt
     1981 atcggcacga acgacgcggg tggacaacgg tgcgccggct gtggctgtct catacattca
     2041 ccacgtcacc tacggagaag cccgcatgtc gtcggctcgt ctcgctgtcg tccccctgtt
     2101 cgtcgccctc ctgctcgtct cggcctgcac ggcgcagatg agcgctccgg cacgtgccac
     2161 tcccggcggc gaactgccgc tgaagctcgc gccgcggccc accacgggcg acatcacgcc
     2221 ggccgacctc atgacgcggc tgtacatctt cgccgatgac tcgatgatgg ggcgtcaggt
     2281 aggcaccgaa tacaatctca agggcaccgc gtacatcgag cgcgaggtcc gccggctcgg
     2341 tctcgttccc gccggcaccg acggatactt ccagaatctg ccgctgttct cctacgccac
     2401 cgacagcacc tcgaccgtgc gcgtggccgg gcagacgctc gtgcgcggca ccgactacct
     2461 ggtctatccg cagggcgagg cccgcctcgc gctcgacggg atgccggtgg tcgccggcgg
     2521 ctccgccgcc gattcggcga cctggatccc ggccgacgcg gcggcgggca ggatcgtcgt
     2581 gctcaccgtg ccgacgacca gcaatccgat tcgcgtcttc tccgggagct cgcgcttcgg
     2641 ccgcgcggcc gcgctcgtca tcgtctcgct ggaccgtctc gcgccgaacg tgcagcgctt
     2701 catcgcgcac cgcaccggac tgcgcgccga ggatgcgccg ctgcccggcc cgccctccat
     2761 cttcgtcacg ccacgcgtcg cggcctcact cttcggtggc gcggtggacg cggtatcgcc
     2821 cggcacggcg gggcgagcac tcgaaggcac gctgatcctg caccaggcgc aggggcccgg
     2881 gcgcaacgtc gtcgcgatcc tgcccggcag cgatcccgtg ctcaagaacc agtacgtcgc
     2941 gatcggcgcg cacaacgatc acatcggctt caacaacagc ccggtggatc acgactccat
     3001 tcgcgccttc aacatggtgg cgcgcgtcca gggtgccgac agcccgcggc ccggcaccct
     3061 cacgcccgag cagacggcgc gcatccgcgc catcacggac agcctgcacg cgctgcaccc
     3121 cgcccggcgc gactcgatca acaacggcgc cgacgacgac ggctcgggat cggtgagcgt
     3181 gctcgagatc gcggaggcgc tggcgacatc gccgacgaag cccaagcggt ccatcctctt
     3241 cgtctggcac accggcgagg aagccggatt gtggggctcg cagcacttca ccgatcatcc
     3301 caccgtccct cgcgactcga tcgtcgcgca gctcaacatg gacatggtcg gccgcggcgc
     3361 cgcgacggac gtgaccggag agctgaagga gggagggctc gcgcgcggtg gaccgggata
     3421 cgtgcagctg atcggctccc ggcgactgtc cacggagctc ggcgacctga tcgagcgcgt
     3481 gaaccgcgac gaacgtctcg gcctcgcctt cgactactcg caggacgcga acggccatcc
     3541 gcagaacatc tactgccgca gtgaccacta cgagtacgcg cggtacggca tcccgatcgt
     3601 cttcgtcacg acgggcgggc actccgacta tcaccaggtg acggacgagc cacagtacat
     3661 cgactacggc cgcatggcgc aggtggcgac gctcgtgcgc gatgcggccg tggcggtggc
     3721 gaacctggat caccgcgtcg tcgtcgacaa ggcgaagccc gatcccaagg gtcgctgcgt
     3781 gcagtgacgg ccggatcgcc ggatgccggg cgaacggtga agcggcggag ctccgccgac
     3841 gatactgcgg tgcgggcctt gccattcata gtcgtccgcg ccggtccctc gctacccgtt
     3901 ccccgctcga tgcgccgctt ctcgctcctc ctgctgctgc cgctcgccgc gtgcgcgccg
     3961 ctcttccgcc gcggtggaag cgaggcgacg ccgccggcga gcttcgtgcg ctcgacggca
     4021 gagctccggt ccacgcgcat gatcgaggtt cgcgagggcc tcacgaagcc cgacgcgatg
     4081 aagctcgtcg cggacgccct gggcgaacgc tacgtggtgg aggtggcgga tcccaacgcc
     4141 ggcttcacga tgacgtcctg gcgatcgacg atgagccgcg aaggggtccc cgacctgcgc
     4201 tatcgcactc ggctcgtgac gcggttcctc ggcgacgact ggcgtcgtct ccaggtgcgg
     4261 agcgaggcca attgggcccg cgccgacgaa tgggacatcg gctacgacgt ggcgcagctg
     4321 gacacggcct cccgcgccct ccgcgagcgg ctcagccccc ggccctgacc gtcagcggac
     4381 cgacacgagc tgccagccgt tcggcgtccg cctcagctgc gcgtgctgcc gctggggagg
     4441 attgacgccc cgcgacccgt cgccccactc gtaggtgaca ttcagctgga aatcggcgtc
     4501 ggcctggtcg ccgtcggttc ccgtcacctt caggtccgcg acggtcgcct tgagccgggt
     4561 cgccttcgcc caggccatct cccatgcctt ctgctgttcg tcggtgaggc cgggatacgc
     4621 ttccttgagc ttgtcgaccg cctgactctc gatgccccgc gcgtagcggt gaatcgcgct
     4681 ctccaccgac ccc
//
LOCUS       DASSYW010000107         2784 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1600105, whole genome shotgun sequence.
ACCESSION   DASSYW010000107 DASSYW010000000
VERSION     DASSYW010000107.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2784)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2784)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2784
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1600105"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1121
                     /gene="metK"
                     /locus_tag="VFN38_01725"
     CDS             <1..1121
                     /gene="metK"
                     /locus_tag="VFN38_01725"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004083625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004478 - methionine adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006556 - S-adenosylmethionine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HET9010498.1"
                     /translation="DAISDAVLHALLAEDPASRVACETLVTTGLAVIAGEITTKAYVH
                     LPDIVRETIRKIGYTDAGYGFDSHTCAVMSTIDRQSPHIAMGVDTGGAGDQGMMFGYA
                     TDETESLMPMPIMLAHELTRALAERRKSGDLKWLRPDGKSQVTVVYEDHEPVAVDTVV
                     ISTQHAPDISNSKIHKAIISDVIEATIPKELRPKKIKYHINPTGRFEIGGPQGDAGLT
                     GRKIIVDTYGGMGRHGGGAFSGKDPSKVDRSACYAARWVAKNIVAAKLARRCEVQVAY
                     AIGVAEPVSVRVDTFGTNTVPEARILEAVKANFDLTPKGIAKALDLRQPIYSATAAYG
                     HFGRTPEKNPRGRNTGTLFTWERTDKAAALKRSARAED"
     gene            1176..1721
                     /locus_tag="VFN38_01730"
     CDS             1176..1721
                     /locus_tag="VFN38_01730"
                     /inference="COORDINATES: protein motif:HMM:NF014618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional nuclease family protein"
                     /protein_id="HET9010499.1"
                     /translation="MIEVTVSRLGLDSSTNSYVVVLQERDGTRLLPIWIGQPEAESIV
                     MHMHNVKRSRPLTHDLVRSLIVGMGAQLRRVQITRVEKSTYYAELHVQRGTELVQIDA
                     RPSDSIAVALRLSAPIYAAESLLVDPAEEAEEGEEESGAEELDLGLSSTEPSDDAELS
                     AEQLKAYLEALRPEDFGKFNP"
     gene            1765..>2784
                     /locus_tag="VFN38_01735"
     CDS             1765..>2784
                     /locus_tag="VFN38_01735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010500.1"
                     /translation="MRAFIAAVAVIVGGGAPVRAQLPVPDAPPVAAVVAGRVVTPGRD
                     REIGVPGVWVTVHRVGPDSAGALDSVRTDAGGRYTIRYRRFGSDEAVYFAAALHHGIA
                     YFSAPLRGVRANVDDAEITVFDTTSAPVRLTVQGHHVVVSAPKPDGFRDIVEVYELSN
                     DTTVTMVGRDSLAPVWSAPIPHDAERFVAGQGDASPATLQRRGDRVTLSAAFGPGVKQ
                     LSYSYALPPGAFPLELVVERQTGVLEVLLEEAGAQVRAPNLRSMGDATTQGRTFKRFL
                     AQTAPEGERVRIDVPATTAATRTRVLAGLAIVIALAMIATLARAVMRRGARADAATAV
                     VSTDAL"
BASE COUNT          434 a          975 c         1000 g          375 t
ORIGIN      
        1 ccgatgccat ctccgatgcc gtgctccatg ccctcctcgc cgaggatccg gcgtcgcgcg
       61 tcgcgtgtga aaccctcgtc acgactggcc tggcggtgat cgccggcgag atcacgacga
      121 aggcgtacgt ccacctgccc gacatcgtcc gcgagacgat ccgcaagatc ggctacaccg
      181 acgccggcta cggcttcgac agccacacct gtgcggtgat gagcacgatc gaccgccagt
      241 ccccgcacat cgcgatgggc gtggacaccg gcggcgccgg cgaccagggc atgatgttcg
      301 gctacgcgac cgacgagacc gagtcgctga tgccgatgcc gatcatgctc gcgcacgagc
      361 tgacccgcgc gctggcggag cgccgcaaga gcggcgacct gaagtggctg cgccccgacg
      421 ggaagtcgca ggtgaccgtc gtgtatgagg accacgagcc ggtggcggtc gacaccgtcg
      481 tgatcagcac gcagcacgcg cccgacatca gcaactccaa gatccacaag gcgatcatca
      541 gcgacgtgat cgaggcgacg atcccgaagg agctgcgccc gaagaagatc aagtaccaca
      601 tcaatcccac cgggcgcttc gagatcggcg ggccgcaggg cgacgccggc ctgaccggcc
      661 gcaagatcat cgtggacacc tacggcggca tgggccggca cggcggcggc gccttcagcg
      721 ggaaggaccc ctccaaggtg gaccgctcgg cgtgctacgc cgcgcgctgg gtggcgaaga
      781 acatcgtcgc cgccaagctg gcccgccggt gcgaagtgca ggtcgcgtac gcgatcggcg
      841 tggccgagcc cgtctcggtg cgcgtcgaca ccttcggcac gaacaccgtg ccggaagcgc
      901 gcatcctcga ggcggtgaag gcgaacttcg acctcacccc caaggggatc gccaaggcgc
      961 tcgacttgcg tcaaccgatc tacagcgcca cggcggcgta tgggcacttc ggtcgcacgc
     1021 cggagaagaa cccgcgcggg cgcaacaccg gcacgctctt cacgtgggag cgcaccgaca
     1081 aggcggccgc gctgaagcgt tcggcgcggg ccgaggacta gcatgacgcg ggcggacgcc
     1141 agcacgccgg cgtccgtccc cgccgggaag gaccgatgat cgaagtcacc gtctctcgcc
     1201 tcgggctcga cagctccacc aactcctacg tcgtcgtgct ccaggagcgc gacggcacgc
     1261 ggctgctgcc catctggatc gggcagcccg aggcggagtc gatcgtcatg cacatgcaca
     1321 acgtgaagcg ctcgcgtccg ctcacgcacg atctcgtgcg gagcctgatc gtcggcatgg
     1381 gagcgcagct gcggcgggtg cagatcacgc gcgtggagaa gagcacctac tacgccgagc
     1441 tgcacgtgca gcgcggcacg gagctcgtgc agatcgacgc gcgcccgtcg gacagcatcg
     1501 ccgtggcgct gcggctctcc gccccgatct acgccgccga gtcgctcctc gtcgatcccg
     1561 cggaggaggc ggaggagggc gaggaggaga gtggcgccga ggagctggat ctcggcctct
     1621 cgtccaccga gccctcggac gacgccgaac tgtcggcaga gcagctcaag gcgtatctgg
     1681 aggcgctgcg gcctgaagac ttcgggaagt tcaatccgta gccgtgtcgt cctgagcgcg
     1741 gcgaaggacg acgaccgctt ccggatgcgt gcgttcatcg ccgcggttgc cgtgatcgtc
     1801 ggcggtggcg cgccggtgcg ggcgcagctg cccgtgcccg acgcgccccc cgtcgccgcg
     1861 gtcgtggccg ggcgcgtcgt cacgccggga cgggaccgcg agatcggcgt gcccggcgtg
     1921 tgggtcacgg tgcatcgggt ggggccggac tccgccggcg cgctcgacag cgtgcgcacc
     1981 gatgcggggg gacgctacac gatccgctat cggcggttcg gcagcgacga ggccgtgtac
     2041 ttcgccgccg cgctgcatca cggcatcgcg tacttctcgg cgccgctgcg cggggtgcgc
     2101 gcgaacgtgg acgacgccga gatcaccgtg ttcgacacga cctccgcgcc cgtgcggctc
     2161 acggtgcagg ggcatcacgt cgtcgtgagc gcgcccaagc cggacggctt ccgcgacatc
     2221 gtggaggtgt acgagctctc caacgacacg acggtgacca tggtgggtcg cgactcgctc
     2281 gcgccggtct ggtcggcgcc catcccgcat gacgccgagc ggttcgtggc cgggcagggc
     2341 gacgcgtcgc cggccacgct gcagcggcgc ggcgaccgcg tgacgctgtc ggccgccttc
     2401 ggtccgggcg tgaagcagct gagctacagc tacgcgctgc cgcccggtgc cttcccgctc
     2461 gagctggtcg tggagcggca gaccggcgtg ctcgaggtgc tgctcgagga ggccggcgcg
     2521 caggtgcggg cgccgaatct ccgatcgatg ggcgatgcga ccacgcaggg gcgcaccttc
     2581 aagcgcttcc tcgcgcagac cgcgccggag ggcgagcggg tgcgcatcga cgtgccggcg
     2641 acgaccgcgg cgacgcgcac gcgcgtgctc gccggcctgg cgatcgtgat cgcgctcgcc
     2701 atgatcgcga cgctcgcgcg cgcggtcatg cggcgcggcg cgcgtgccga cgccgcgacg
     2761 gccgtcgtct ccacggatgc gctg
//
LOCUS       DASSYW010000108         2245 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_512964, whole genome shotgun sequence.
ACCESSION   DASSYW010000108 DASSYW010000000
VERSION     DASSYW010000108.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2245)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2245)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2245
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_512964"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..765
                     /locus_tag="VFN38_01740"
     CDS             <1..765
                     /locus_tag="VFN38_01740"
                     /inference="COORDINATES: protein motif:HMM:NF012343.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HET9010501.1"
                     /translation="RGFTNGMFEWLRKAPWGDPGFSSLIFSVVVFGFFGGITGVTIGT
                     EQINIIAHNTLRVPGHFHATVVSGTAMAFMGATYYLLPLIFQRKVAFWKLAKVQPYLF
                     AGGMLLVETGMTFAGSFGVPRRHWDISFSQAPFDVPFNPAVDLFLAMVGIGAIIGVTG
                     ALSFILIAVKSVFFGEPITSFPKGVVVAGIPQGLTNPPVHPPNVDEVNERLHAPGNGR
                     WGPTPGTVVLVGVFFLAFALYYFTNWKLLSFLWKIG"
     gene            765..1649
                     /locus_tag="VFN38_01745"
     CDS             765..1649
                     /locus_tag="VFN38_01745"
                     /inference="COORDINATES: protein motif:HMM:NF014667.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HET9010502.1"
                     /translation="MRRRTGRPGLALVTLLAIVAITTAWWALALWPAGASEPEWLVRT
                     RAACFGAAPGGLPDAGGWILLIGEPLGMMGVFLAIWRQSLAEDLRRLRADPLWRIVVG
                     NLTVAAIVAVGLLGARVARGYGVGRSVTTRNAGVLTRLDAVAPSVTLVDQHEQQVALG
                     DYRGRPALLTVAFGHCTTVCPTIVGDLMAARRSAGRTDVRLLVLTLDPWRDTPDRLPT
                     LAEHWGLARDDRVLSGSIAEVEAALDGLGIARTRNETTGAVDHVATVLFLDARGRVAW
                     RLDGWWGGVAALLDPAHR"
     gene            complement(1664..2122)
                     /locus_tag="VFN38_01750"
     CDS             complement(1664..2122)
                     /locus_tag="VFN38_01750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010503.1"
                     /translation="MKRQLLVVSLGGMVASAGSACGHDAVGPNRSITGSYTLTRVYDI
                     PMPSLVKDEGTQYRLLFRSGFLTLRPDSTFDMPFDAVFVDYPNIVINGHHFGSYHWTA
                     ESAKLELESPSTGFRLQGTAGADTVRLNLDRGYVRAPSPVYDYTFRRAPR"
BASE COUNT          328 a          732 c          766 g          419 t
ORIGIN      
        1 cgcggcttca cgaacggaat gttcgaatgg ctgcgtaagg cgccgtgggg cgatcccggt
       61 ttctcgtcac tgatcttttc ggtggtggtc ttcggattct tcggcggaat aaccggggtc
      121 acgatcggca ccgagcagat caacatcatc gcgcacaaca cgctgcgtgt gcccgggcac
      181 ttccacgcca cggtcgtgag cgggaccgcg atggcgttca tgggcgcgac gtactacctg
      241 ctgcccctca tcttccagcg aaaggtcgcg ttctggaagc tcgcgaaggt gcagccgtac
      301 ctgttcgccg gcggcatgct cctcgtcgag accgggatga cgttcgccgg cagcttcggc
      361 gtgccgcgcc gccactggga catctcgttc tcgcaggcgc cgttcgacgt gccgttcaat
      421 ccggcggtcg atctgttcct ggcgatggtc ggcatcggcg cgatcatcgg cgtcacgggc
      481 gcgctctcct tcatcctcat cgccgtcaag tcggtgttct tcggcgagcc gatcacgtcc
      541 ttcccaaagg gcgtcgtggt ggcggggatt ccgcagggct tgacgaatcc gccggtgcat
      601 ccgcctaacg tcgatgaggt gaacgagcgg cttcatgcac cgggcaacgg ccgctggggc
      661 ccgacacccg gtacggtcgt cctcgtcggc gtcttcttcc tcgcgttcgc actctactat
      721 ttcacgaact ggaagctcct gagcttcctc tggaagatcg ggtagtgcgc cgccgcactg
      781 gccggccggg gctggcgctc gtcacgttgc tcgcgatcgt tgcgatcacg acggcgtggt
      841 gggcgctcgc gctctggccg gctggtgcga gcgagcccga atggctcgtg cgaacccgcg
      901 ccgcgtgctt cggcgctgcg cctggcggat tgcctgacgc gggcggctgg attctcctca
      961 ttggcgagcc gctgggaatg atgggcgtct ttctcgcgat ctggcggcag tcgctcgccg
     1021 aagacctgcg ccggctgcgc gccgatccgc tgtggcggat cgtcgtcggg aacctcaccg
     1081 tcgcagcgat cgtggccgtc ggcctcctcg gagctcgagt ggctcgcggt tacggcgtcg
     1141 gccgctcggt caccacccga aatgccggcg tgctcacgcg actcgacgcc gtcgcgccat
     1201 cggtcaccct ggtcgaccag cacgagcagc aggtggcgct cggcgattat cggggtcgtc
     1261 ccgctctgct gacggtggcg ttcgggcact gcacgacggt ttgcccgacc attgtgggcg
     1321 atctcatggc ggcacgccgt tcagccggcc ggacggacgt taggctcctc gtcctgacgc
     1381 tggatccgtg gcgcgacacg cccgaccggt tgccgaccct cgcggagcac tgggggttgg
     1441 cgcgggacga tcgcgtgctg tcgggaagca tcgccgaggt cgaggccgcg ctcgatggtc
     1501 tcggcatcgc ccgaacccgg aacgagacga cgggcgccgt cgaccacgtc gcgaccgtcc
     1561 tgttcctcga cgcccgcggt cgagtcgcgt ggcgcctcga tggctggtgg ggtggcgtcg
     1621 cagccctgct cgacccggcg catcgttagg ctcgcccggc cgatcaccgc ggagcgcgcc
     1681 gaaacgtgta gtcgtacacg ggactcggcg cgcgtacgta gccgcggtcc aggttcagtc
     1741 gcaccgtatc ggcgccggcc gttccctgga gccggaatcc cgttgacggc gactcgagct
     1801 cgagctttgc cgactcggct gtccagtgat acgagccgaa atggtgaccg ttgatgacga
     1861 tgttcgggta gtcgacgaat accgcgtcga acggcatgtc gaatgtggag tcgggccgga
     1921 gggtgagaaa tccgcttcga aacaacagcc ggtattgggt accctcgtcc ttcaccagcg
     1981 agggcatggg gatatcgtac acccgcgtca gcgtgtagga ccccgtgatg gatcggttgg
     2041 ggccaacggc gtcatggccg caggctgatc ccgcgctcgc gaccatgccg ccgagcgaga
     2101 cgaccagaag ctgtcgcttc atgtcctgga gaccgagccg aacaatccgg cgacaccgtg
     2161 caccttcgac atgaaggtcg aggtatcacg atgcgtacca ctgcgctggt gacgggaagc
     2221 ctggtcacac gttaggcggt gaccg
//
LOCUS       DASSYW010000109         4290 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1581673, whole genome shotgun sequence.
ACCESSION   DASSYW010000109 DASSYW010000000
VERSION     DASSYW010000109.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4290)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4290)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4290
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1581673"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..638)
                     /locus_tag="VFN38_01755"
     CDS             complement(<1..638)
                     /locus_tag="VFN38_01755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010504.1"
                     /translation="MLRKYSRLAVAGLALQAGCALVGRDAPPRQPDAELLHAAMHQLT
                     GVMVYDIFSPPQASRVYAYASTAAYEVLRQEHPEYRSLAGQLHGLSPVPAPEPNAEYS
                     MPLAGVHAFMTVGRALTFSRPRMDSLRSAMDERIRASGVSEPVYERSIAYGDTVAKHI
                     LAWAAKDKFVQTRGYPKYTVTSAPGRWVPTPPAYMDAVEANWGVLRPFVLDSA"
     gene            complement(643..4056)
                     /locus_tag="VFN38_01760"
     CDS             complement(643..4056)
                     /locus_tag="VFN38_01760"
                     /inference="COORDINATES: protein motif:HMM:NF019229.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VCBS repeat-containing protein"
                     /protein_id="HET9010505.1"
                     /translation="MTQLTALFPWRLVPALCLSAGAIACSRTSDSADVIQAGSAPAVQ
                     NALFTSLPSSVTGVRFENRLTDSPELNVFTYRNYYNGGGVAIGDLTGDGRPEIVLTSN
                     QEGPRLYRNEGAFHFRDVTKAAGLAAAEDSWTTGVTLADLNGDGRLDIYLCRAGKGTP
                     EQRANELWINQGVNADGVPTFREMAKQYGVADEGYSIHAAVLDYDRDGDLDLFVINNS
                     PRPANSFGLRNTRDVRDRFGGAKLFRNDGARFTDVSAAAGIHSPEIAFALGVAVGDVN
                     RDGLPDLYVSNDFFERDYLYVNRGNGTFSEALDQRMPVLSFFSMGLDVADVDNDGWPD
                     VYTTDMLPEDEYRLKTTTQFEGWDVYQTKLRNGLHHQSMRNMLQRNNRDGTFSDVGQM
                     AGVARTDWSWSALITDLDLDGDKDIFVTNGLVKDITSQDYVAFLANEETMKAATNEGR
                     SKVDFVSLTKAMTSTRIPNYAFHNTGAMRFANEAAAWGLDTPSFSSGAAYGDLDGDGA
                     LDLVVNNVDQEAFVYRNNARTLRPENHFLRVRLDGAAGNRFAVGARVTAYAGGRAFMQ
                     EESPARGFQSSVDYLLVFGVGRSATVDSLRVEWPDGRVTSRLNVAADQLVTLRHAESV
                     PAAAPPPVSRPTLLSDVTQQTTLDFRHHENDFVDFDRERLIPKLLSTEGPMAAVADVN
                     GDGLDDLFLGGAKEQPGRLLLQQRDGKFVSGSEATFAADAISEDLGAAFLDADGDGDL
                     DLYVVSGGNEYSEGAPALQDRLYLNDGRGQFRKATDRLPPETTSGSRVAAADFDGDGA
                     IDLFVGGRVVPGRYGIAPASALLRNDGRGHFTDVTERLAPGLAKVGMVTDAVWRDVDR
                     DGRVDLVIVGEWMPITIFRNAGGGKLKRLEVRGLEKSHGWWNRIVAGDFDGDGRVDFV
                     VGNLGTNGRLHASATEPATMYVKDFDGNGFAEQIVSLYNGGVSYPLPLRDDLIKSLPY
                     LKARYLNYKNYARQTVTDIFSAKELEEAVQQRVYTFATSIAYNNGDGSFTLVPLPDEA
                     QLAPVYGILGTDVDRDGRTDLLLAGNFDGFKPEIGRMSAGYGLLLRNDGKRSFTPVRA
                     PESGFQVPGQSRDIQRVRTADGAVIVVARNNDRPLVFRTTGPVRIARGR"
BASE COUNT          595 a         1496 c         1510 g          689 t
ORIGIN      
        1 gccgagtcga gcacgaaggg gcgcagcacc ccccagttgg cctccacggc gtccatgtag
       61 gcgggcggcg tcggcaccca ccggcccggc gccgaggtca cggtgtactt cgggtagccg
      121 cgggtctgga cgaacttgtc cttcgccgcc caggcgagga tgtgcttcgc cacggtgtcg
      181 ccgtaagcga tggagcgctc gtacacgggc tccgataccc cgctcgcccg gatgcgctcg
      241 tccatcgcgc tccgcagcga gtccatccgc gggcgtgaga aggtgagcgc gcggcccacc
      301 gtcatgaagg cgtggacgcc ggcgagcggc atggagtatt ccgcgttcgg ctccggtgcc
      361 ggaacgggcg acagcccgtg cagctggccg gcgagcgagc ggtactcggg gtgctcctgc
      421 cgcagcacct cgtacgcggc ggtgctggcg taggcgtaca cccggctcgc ctgcggcggg
      481 ctgaagatgt cgtagaccat cacgccggtg agctgatgca tcgccgcgtg cagcagctcg
      541 gcatcgggct gccggggcgg cgcatcgcgc cccaccagcg cgcagcccgc ctgcagcgcg
      601 agacccgcca ccgccaaccg tgaatacttc ctcagcatgg tgctacctcc ctcgagcgat
      661 tcgaaccgga ccggtagtac ggaacaccag cggccggtcg ttgttgcgag ccacgacgat
      721 caccgcacca tccgcggtgc gcacgcgctg gatgtcgcgc gactgccccg gcacctggaa
      781 cccgctctcg ggcgcccgca ccggcgtgaa cgagcgcttg ccgtcgttgc gcagcagcag
      841 gccgtagccc gcgctcatgc ggccgatctc cggcttgaag ccgtcgaagt tgcccgcgag
      901 cagcaggtcg gtgcggccgt cgcggtccac gtccgtgccc aggatcccgt agaccggcgc
      961 gagctgcgcc tcgtcgggca gggggacgag cgtgaacgag ccgtcgccgt tgttgtacgc
     1021 gatcgaggtg gcgaaggtgt acacccgctg ctgcaccgcc tcctccagct ccttcgccga
     1081 gaagatgtcg gtgaccgtct ggcgcgcgta gttcttgtag ttcaggtagc gcgccttcag
     1141 gtagggcagc gacttgatca ggtcgtcgcg gagcggcagg ggatagctca ccccgccatt
     1201 gtagagcgag acgatctgtt cggcgaagcc gttcccgtcg aagtccttca cgtacatcgt
     1261 ggccggctcg gtggcggagg cgtgcagccg gccgttcgtc ccgaggttgc ccaccacgaa
     1321 gtccacgcgc ccgtccccgt cgaagtcgcc ggcgacgatg cggttccacc agccgtggct
     1381 cttctccagg ccgcgcactt cgaggcgctt cagcttcccg ccgccggcgt tgcggaagat
     1441 cgtgatcggc atccactcgc cgacgatcac aaggtcgacc cggccgtccc ggtcgacgtc
     1501 gcgccagacg gcgtcggtca ccatgccgac cttggcgagg ccgggcgcca gccgctcggt
     1561 aacgtcggtg aaatggccgc gcccgtcgtt cctcagcagc gcgctcgcgg gcgcgatgcc
     1621 gtagcggccg ggcaccaccc gcccacccac gaagagatcg atcgcgccgt cgccgtcgaa
     1681 gtcggcggca gccacccgcg atccgctcgt ggtctccggc ggcaggcggt cggtcgcctt
     1741 gcggaactgg ccgcggccgt cgttcaggta gagccggtcc tggagcgccg gtgccccctc
     1801 ggagtactcg ttcccgccgc tcaccacgta caggtccagg tccccgtcgc cgtccgcgtc
     1861 gaggaacgcg gcgccgaggt cctcggagat cgcgtccgcg gcgaaggtcg cctcgctgcc
     1921 cgacacgaac ttcccgtcgc gctgctggag cagcagcctg cccggctgct ccttggcgcc
     1981 gccgaggaac aggtcgtcca gcccgtcgcc gttcacgtcg gccaccgccg ccatcggccc
     2041 ctcggtggac agcagcttcg ggatcagccg ctcgcggtcg aagtccacga agtcgttctc
     2101 gtggtgccgg aagtcgagcg tcgtctgctg cgtcacgtcg ctcagcagcg tcggcctcga
     2161 cacgggcggc ggcgctgcgg cgggtaccga ctcggcgtgc cgcagcgtca cgagctggtc
     2221 ggcggcgacg ttcagccgcg acgtcacgcg cccgtcgggc cactccaccc gcagcgagtc
     2281 cacggtcgcg ctccttccca caccgaagac gagcaggtag tcgacgctcg actggaagcc
     2341 ccgcgccggc gattcctcct gcatgaaggc gcggccgccc gcgtaggcgg tcacccgggc
     2401 gccgacggcg aaccggttgc ccgccgcgcc gtcgagccgc acgcggagga agtggttctc
     2461 cgggcgcagg gtgcgggcgt tgttgcggta gacgaacgcc tcctggtcca cgttgttcac
     2521 cacgaggtcc agcgcgccgt cgccatcgag gtccccgtac gcggcgccgc tcgagaagct
     2581 gggcgtgtcg agcccccacg ccgcggcctc gttggcgaag cgcatcgcgc ccgtgttgtg
     2641 gaacgcgtag ttcgggatcc gcgtcgaggt catcgccttc gtgaggctca cgaagtccac
     2701 cttcgaccgt ccctcgttcg tcgccgcctt catcgtctcc tcgttggcga ggaaggccac
     2761 gtagtcctgc gaggtgatgt ccttcaccag cccgttggtg acgaagatgt ccttgtcgcc
     2821 atcgagatcg aggtcggtga tcagggcgct ccagctccag tcggtgcgcg ccacgccggc
     2881 catctggccc acgtcgctga aggtgccgtc gcggttgttc cgctggagca tgttgcgcat
     2941 ggactggtgg tgcagcccgt tgcggagctt cgtctggtag acgtcccacc cctcgaactg
     3001 ggtcgtcgtc ttcaggcggt actcgtcctc cggcagcatg tcggtggtgt agacgtcggg
     3061 ccagccgtcg ttgtccacgt cggcgacgtc gagccccatc gagaagaagc tgagcaccgg
     3121 catgcgctgg tcgagcgcct cggagaaggt gccgtttccc ctgttgacgt agaggtagtc
     3181 gcgctcgaag aagtcgttgg agacgtagag gtcgggcagg ccgtcgcggt tcacgtcgcc
     3241 caccgccacg ccgagcgcga aggcgatctc cgggctgtgg atgccggcgg ccgcgctcac
     3301 gtcggtgaac cgcgcgccgt cgttgcggaa cagcttcgcg ccgccgaacc ggtcgcggac
     3361 gtcgcgggtg ttgcgcagcc cgaagctgtt cgccggccgc ggcgagttgt tgatgacgaa
     3421 caggtccagg tcgccgtcgc ggtcgtagtc gaggacggcg gcgtggatcg agtagccctc
     3481 gtcggcgacc ccgtactgct tcgccatctc gcggaaggtg ggcacgccgt ccgcgttcac
     3541 tccctggttg atccagagct cgttggcccg ctgttcgggc gtgcctttgc cggcgcggca
     3601 caggtagatg tccagccggc cgtcgccgtt caggtcggcc agcgtcaccc ccgtggtcca
     3661 cgagtcctcg gcggccgcga gccccgccgc cttcgtgacg tcgcggaagt ggaaggcgcc
     3721 ctcgttccgg tacagccgcg ggccctcctg gttggacgtc agcacgatct ccggccggcc
     3781 atcgcccgtg aggtcgccga tcgccacccc gccgccgttg tagtagttgc ggtaggtgaa
     3841 gacgttgagc tccggcgaat cggtgagccg gttctcgaac cgcacccccg tgacgctcga
     3901 cggaagcgag gtgaagagcg cgttctgcac ggccggcgcc gaacccgcct ggatcacgtc
     3961 cgcgctgtcc gaggtcctcg agcacgcgat ggcgccggcg gagaggcaga gcgccgggac
     4021 caggcgccac gggaagaggg cggtgagctg cgtcatgcga cgggacggga gcggcggggg
     4081 gtgcggcggt acgactggac gacggggcgg aaggtgcgca cgccccaggg aggatcggtc
     4141 ctgctgcgcc atagcctgcc ccggccgggg caggctatgg cgggaaagct cctgcgtcag
     4201 ccggctcagt agccggggtt ctgcaccagc ttggggttcg tctgcatctg cgtctcggga
     4261 atcgggaaca ggatgcggta ggcccccgtc
//
LOCUS       DASSYW010000110         2191 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_402503, whole genome shotgun sequence.
ACCESSION   DASSYW010000110 DASSYW010000000
VERSION     DASSYW010000110.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2191)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2191)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2191
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_402503"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..374
                     /locus_tag="VFN38_01765"
     CDS             <1..374
                     /locus_tag="VFN38_01765"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HET9010506.1"
                     /translation="EIMRLTSGRGVDVAIEALGTQQTFERCLRVLRPGGVLSSLGVYS
                     DKLAVPLDAFAAGLGDLSIVSTLCPGGKDRMRRLMAIVGSGQVDLRPLVTHRFPLDQI
                     QEAYDLFSHQRDGVLKVAITP"
     gene            419..1018
                     /locus_tag="VFN38_01770"
     CDS             419..1018
                     /locus_tag="VFN38_01770"
                     /inference="COORDINATES: protein motif:HMM:NF015674.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF308 domain-containing protein"
                     /protein_id="HET9010507.1"
                     /translation="MLTPYRALDQFSWSQLVRGFVLVQFGIAAINWPDAARSTSMRLA
                     GALVALSGLYDVVLGVGARRSLRAWAVLVGHGAACVAFGALTIALPLLSISTAMSLVA
                     LWLVLYGALAGALALGIWPLRRTRWTLLAVAAMIIPLGVASTLLADMPEFVPLYLGAF
                     FAVFLGALHLAGGVWLRRVALPQFAPTVQAGWSPVARRR"
     gene            complement(1029..2003)
                     /locus_tag="VFN38_01775"
     CDS             complement(1029..2003)
                     /locus_tag="VFN38_01775"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HET9010508.1"
                     /translation="MSAELATTPKPGSLSAPRPRLDLSGRPVLLATDGSPESAAAARV
                     AFAIAERHHAELHVVRVVDTRAAPIPPPLDLAIAIADASMGESVHQEQVDAVRSDLES
                     AVGKPVDWPVRIALGTPAHVIVHEARRLRTELVIVGLRRHGRLDRAMQDETALEVMRN
                     AMCPVLGVAAQATGLPTKVLAAMDFSLASLAAARAARAVIAGGGTIVLAYTPPVSFDL
                     PDDGEAVIHRLGVAAAFAQSRAELEGGGVKTDEVVLHRELSAPVASALLEYADTARCD
                     LISAGSARRGRIDRWMLGSVSTDLVRDGRHSVLVVPPRPPKAEAAPEA"
BASE COUNT          265 a          823 c          768 g          335 t
ORIGIN      
        1 aggagatcat gcggctcacc agcgggcgcg gcgtggacgt cgccatcgag gcgctgggca
       61 cgcagcagac cttcgagcgc tgcctgcgcg tcctgcgtcc cggcggcgtg ctctccagcc
      121 tcggcgtcta ctccgacaag ctcgccgtgc ccctcgatgc cttcgccgcg ggactgggcg
      181 acctgtccat cgtgagcacg ctctgccccg gcggcaagga ccggatgcgg cggctcatgg
      241 ccatcgtcgg ctcgggccag gtggatctcc gcccgctcgt gacgcatcgg ttcccgctcg
      301 accagattca ggaggcatac gacctgttct ctcaccagcg cgacggcgtg ctcaaggtgg
      361 ccatcacgcc gtagccacgg cgataccggg gccattcact cgtgaccgga ggcgcatcgt
      421 gctcaccccc tatcgcgcgc tcgaccagtt ctcctggtcg cagctggtgc gcggcttcgt
      481 gctcgtgcag ttcggcatcg ccgcgatcaa ctggcccgac gcggcgcggt ccacctcgat
      541 gaggctggcg ggggcgctcg tggcgctctc gggactgtac gacgtcgtcc tcggtgtcgg
      601 cgcccgccgg tcgcttcgcg cctgggcggt gctggtgggc cacggcgcgg cctgcgtcgc
      661 cttcggggcg ctcacgatcg cgctcccgct cctctccatc tcgacggcga tgtcgctcgt
      721 cgccctgtgg ctcgtgctgt acggcgcgct ggcgggcgcg ctcgcgctgg gaatctggcc
      781 cctgcggcgc acccgctgga cgctcctcgc ggtcgcggcg atgatcatcc cgctgggcgt
      841 cgcctccacg ctcctcgccg acatgccgga gttcgtgccc ctctacctcg gcgcgttctt
      901 cgccgtgttc ctcggcgcgc tgcacctggc cggcggggtc tggctccgcc gggtcgcgct
      961 cccgcagttc gcgcccaccg tgcaggccgg gtggtctccg gtcgcgcgcc ggcggtgacc
     1021 ccggcgcgct atgcctcggg cgccgcctcc gccttgggcg ggcgcggcgg aaccacgagc
     1081 acggaatgcc ggccgtcgcg cacgagatcc gtgctgacgc tgccgagcat ccagcgatcg
     1141 atccgcccgc ggcgcgcgct tccggcggag atcaggtcgc aacgcgcggt gtcagcgtac
     1201 tccagcagcg ccgaagccac cggcgccgac agctcgcggt gcagcaccac ctcgtcggtc
     1261 ttcacgccgc cgccctcgag ctccgcgcgg ctctgcgcga aggccgccgc gacacccagc
     1321 cggtggatca ccgcctctcc gtcgtccggc aggtcgaagc tcaccggcgg cgtgtaggcc
     1381 agcacgatgg ttccgccgcc ggcgatcacg gcgcgcgccg cacgggccgc cgccaggctg
     1441 gccaggctga agtccatggc cgcgagcacc ttcgtgggca gcccggtggc ctgcgcggcc
     1501 acgccgagca cgggacacat cgcgttgcgc atcacctcga gggccgtctc gtcctgcatc
     1561 gcccggtcga gccgcccatg ccgccgcaac ccgacgatca cgagctccgt gcgcagccgg
     1621 cgcgcctcgt gcacgatcac gtgcgcgggg gtgccgagcg cgatgcgcac cggccagtcc
     1681 accggcttcc ccaccgccga ctcgaggtcg gagcgaaccg cgtcgacctg ctcctggtgc
     1741 accgactcgc ccatggaggc gtcggcgatc gcgatggcga gatcgagcgg tggcggaatg
     1801 ggcgccgccc gcgtgtccac taccctgacg acgtgcagct cggcgtgatg acgctccgcg
     1861 atcgcgaacg cgactcgtgc cgcggccgcg gattccggcg agccatcggt ggccagcagc
     1921 acgggccgcc cggagaggtc gagccgtggg cgcggagcgg agaggctgcc aggcttcggc
     1981 gtggtggcga gttcggcgga catgaagcct cctgatcgca cgggaaggtc gcgcccggat
     2041 gttcgcatgc cgtggtcgct ggcgctgtca ggcatttgcg gacggcactg gcgcgctcgg
     2101 cttcgcatcg tcggaccacc accagcggga ggatcagatg tcgggcgtca cgagccacac
     2161 ctcggaaccg cagcgcgatt cagttcgagc c
//
LOCUS       DASSYW010000111         3391 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_881482, whole genome shotgun sequence.
ACCESSION   DASSYW010000111 DASSYW010000000
VERSION     DASSYW010000111.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3391)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3391)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3391
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_881482"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1589)
                     /locus_tag="VFN38_01780"
     CDS             complement(<1..1589)
                     /locus_tag="VFN38_01780"
                     /inference="COORDINATES: protein motif:HMM:NF024909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BatA domain-containing protein"
                     /protein_id="HET9010509.1"
                     /translation="MTFLAPLFALALAGLAIPVLLHLTQKEKKEVVYFPSLMFVRKIP
                     YQASRRRRIQHWFLLMLRCAALALIILAFTRPLWNTVDAPIALGQGAREVVVLLDTSY
                     SMGYGPRWQAAVAAANNVVSGLGASDRASIVTFGSGTEILIRNTAEHSALNGAIAAAK
                     PGASATRYSPALKVAGSLLAESQLPRREVVLISDFQRSGWRGQEGRSLPAGATLTTVP
                     IQGTADRPNLSVTALSLQRSRFANQERVTVTAGITNRSETAVTNQPVKLEAGGLQVAS
                     KTFSVEGGASTSVTFDAFTIAGRNYKGTVRLGDDALLADNAFNFVVSPSEPVHVVLID
                     RGGGGSGLYVGQALTIGDAPKFDMVTRQPENLSDDDLRRTSLVVLNDVAVTSPLARRL
                     QKFVDGGGGLLVAAGGRAAWPRDVDLLPATIGNPVDRSRGDIARVGGIEFGHPVFEAF
                     RAPRSGDFASVRVYGYRNLAPATGAQVLARFDSGAPAVAERRVGAGRVLLWGSSFDQS
                     WTDLPIRAVFLPFVQRAATHLV"
     gene            complement(1597..2511)
                     /locus_tag="VFN38_01785"
     CDS             complement(1597..2511)
                     /locus_tag="VFN38_01785"
                     /inference="COORDINATES: protein motif:HMM:NF024909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HET9010510.1"
                     /translation="MSTETHEIPGARFMDPKVLARIGNLELVSHAVVDGFINGLHKAP
                     YFGASVDFAEHRGYVPGDDIRRMDWRVWARTDRYYIKEYEAESNMNFSVLLDVSKSMD
                     YGGKGIKKIDYGRIIAACLTSLVSHQRDRVGMAAIDSDVVEYVPPSAKHLETVMHVLD
                     RLTPGKPGSLKAPLHKLAEHYGRRGVLVLISDLYEDPEAVVEAVKPLRFRGNDVMVFH
                     VLDRDELEFGFSDASPFEDLETGEQVPVVPDSLRKEYKAMVQAHIEALGKSFSKVGVE
                     YALFDTSQPLDYVLFKFLSARSRKSRRR"
     gene            complement(2513..>3391)
                     /locus_tag="VFN38_01790"
     CDS             complement(2513..>3391)
                     /locus_tag="VFN38_01790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HET9010511.1"
                     /translation="VGGNSLIVGAPGLAKTLLIYTISKVLDLKFSRIQFTPDLMPSDI
                     TGTDLVQEDATTGRRQMVFAPGPIFANIVLADEINRTPPKTQSALLEAMQEHRVTIQG
                     RTYQLAEPFYVFATQNPIELEGTYPLPEAQLDRFMFHIIIEHPPYDEEIDVVRTTTAI
                     LAPEFNKPISGDDLVAFQRLVRKVPVAEPVMRHALDLVRASRPKDETSPEIVKKFVAF
                     GASVRAAQYLILGGKARALTSGRYHVSFEDVRALAHPVLRHRIITNFHAQSEGVTSDN
                     VVDRLLQAVPLPRSGM"
BASE COUNT          536 a         1176 c         1146 g          533 t
ORIGIN      
        1 acgaggtgcg tggccgcccg ctgcacgaac ggcaggaaca ccgcccggat gggcaggtcg
       61 gtccacgact ggtcgaacga cgacccccac agcagcacgc gtccggcgcc gacacgccgc
      121 tcggcgacgg ccggtgcgcc cgagtcgaac cgcgccagca cctgcgcgcc cgtcgcgggc
      181 gccaggttgc ggtagccgta cacccgcacc gacgcgaagt cgccgctgcg cggcgcgcgg
      241 aacgcctcga acaccgggtg gccgaactcg atgccgccca cgcgcgcgat gtcgccgcgc
      301 gagcggtcca ccgggttgcc gatcgtcgcg ggcagcaggt ccacgtcgcg cggccaggcc
      361 gcacgccccc ccgccgccac cagcagcccg ccgccgccgt ccacgaactt ctgcagccgg
      421 cgcgcgagcg gcgacgtcac ggccacgtcg ttgaggacga cgagcgaggt acggcgcagg
      481 tcgtcgtcgc tcaggttctc gggctggcgc gtgaccatgt cgaacttcgg cgcgtcgccg
      541 atcgtgagcg cctgccccac gtagaggccg ctgccgccgc cgccgcgatc gatcagcacc
      601 acgtgcaccg gctcggaggg cgacaccacg aagttgaacg cgttgtcggc cagcagcgcg
      661 tcgtcgccca gccgcaccgt gcccttgtag ttgcggccgg caatcgtgaa cgcgtcgaac
      721 gtcaccgacg tgctggcacc gccctccacg ctgaaggtct tcgacgccac ctgcaggccg
      781 cccgcttcga gcttcaccgg ctggttggtg acggcggtct ccgaccggtt ggtgatgccg
      841 gccgtgacgg tcacgcgctc ctggttggcg aatcgcgagc gctgcagcga cagggcggtc
      901 acgctcaggt tcggacgatc ggcggtgccc tgaatcggca ccgtcgtcag cgtggcgccg
      961 gcgggcaggg acctcccctc ctgcccgcgc cagccggatc gctggaagtc gctgatcaac
     1021 accacttcgc gccgcggcag ttgcgactcg gcgagcaggc ttcccgccac cttgagcgcc
     1081 ggcgagtagc gcgtggccga cgcgccgggc ttggccgccg cgatggcgcc gttcagcgcg
     1141 ctgtgctcgg ccgtgttgcg aatcaggatc tcggtccccg atccgaaggt gacgatcgac
     1201 gcacgatcgg aagcgcccag ccccgacacg acgttgttcg ccgcggccac cgccgcctgc
     1261 cagcgcgggc cgtaccccat gctgtagctg gtgtcgagca gcaccaccac ttcgcgcgcg
     1321 ccctgcccga gcgcgatcgg cgcatcgacg gtgttccaga gcggccgggt gaaggcgagg
     1381 atgatgagcg ccagcgccgc gcaccggagc atcagcagga accagtgctg gatgcggcgc
     1441 cgccgcgacg cctggtacgg aatcttccgc acgaacatca gcgacgggaa gtagacgacc
     1501 tccttcttct ccttctgcgt gaggtgcagc aggacgggaa tcgccaaccc ggcgagcgcg
     1561 agcgcgaaca gcggcgcgag aaaggtcatc gacggcctac cgcctcctcg atttccgcga
     1621 gcgggcgctc aagaacttga acaacacgta gtcgagcggt tgcgacgtgt cgaacagcgc
     1681 gtactccacg ccgaccttcg agaagctctt gccgagcgct tcgatgtgcg cctgcaccat
     1741 cgccttgtat tccttgcgca gcgagtcggg caccaccggc acctgctcgc ccgtctcgag
     1801 atcctcgaac ggcgacgcgt ccgaaaagcc gaactcgagc tcgtcccggt cgaggacgtg
     1861 gaacaccatg acgtcattgc cgcggaaccg cagcggcttc acggcctcga ccaccgcttc
     1921 cgggtcttcg tacaaatcgg agatgagcac caggacgccg cgccgcccgt aatgctccgc
     1981 cagcttgtgc agcggcgcct tgaggctccc cggcttcccc ggcgtcagcc gatcgagcac
     2041 gtgcatcacg gtctcgaggt gcttggccga cggcggcacg tattcgacga cgtccgagtc
     2101 gatggcggcc atgcccacgc ggtcgcgctg gtggctcacg agactcgtga ggcacgcggc
     2161 gatgatccgt ccgtagtcga tcttcttgat gcccttgccg ccgtagtcca tggacttcga
     2221 cacgtccagc aggacgctga agttcatgtt cgactcggcc tcgtattcct tgatgtagta
     2281 gcggtcggtg cgcgcccaca cgcgccagtc catgcggcga atgtcgtcgc ccggtacgta
     2341 gccgcggtgc tcggcgaagt ccaccgaggc gccgaagtac ggcgccttgt ggaggccgtt
     2401 gatgaagccg tccacgacgg cgtgcgacac gagctcgagg ttgccgatgc gcgccaggac
     2461 cttcgggtcc atgaagcgcg cgccgggaat ctcgtgggtc tctgtggaca cgctacattc
     2521 ccgagcgcgg aagcgggacg gcttgcagga gccgatcgac gacgttgtcg ctcgtcacgc
     2581 cttccgactg cgcgtggaag ttggtgatga tgcggtggcg cagcaccgga tgcgccagcg
     2641 cgcggacgtc ttcgaagctc acgtggtagc ggccgctcgt gagcgctcgc gccttgccgc
     2701 cgaggatcag gtactgcgcg gcacgcacac tggccccgaa cgccacgaac ttcttcacga
     2761 tctcgggcga cgtctcgtcc ttcggacggc tggcgcgcac cagatcgagc gcgtgacgca
     2821 tcaccggctc cgccacgggc accttgcgga ccaggcgctg gaacgcgacg aggtcgtcgc
     2881 ccgaaatcgg cttgttgaac tcgggcgcca gaatcgcggt ggtcgtccgc acgacgtcga
     2941 tctcctcgtc gtacggcggg tgctcgatga tgatgtggaa catgaaccgg tcgagctgcg
     3001 cttccggcag cggatacgtg ccctcgagct cgatcgggtt ctgggtggcg aacacgtaga
     3061 acggctcggc cagctgatac gtgcgcccct gaatcgtgac gcggtgctcc tgcatcgctt
     3121 cgaggagcgc cgactgcgtc ttcggcggcg tgcggttgat ttcgtcggcc agcacgatgt
     3181 tcgcgaagat cggcccaggc gcaaacacca tctgacggcg gccggtcgtg gcgtcttcct
     3241 gcacgaggtc cgtgccggtg atgtccgacg gcatcaggtc cggcgtgaac tggatgcgcg
     3301 agaacttcag gtcgagcacc ttcgagatgg tgtagatgag cagcgtcttg gcgaggccgg
     3361 gcgcgccgac gatcaggctg ttgccgccga c
//
LOCUS       DASSYW010000112         2211 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1029253, whole genome shotgun sequence.
ACCESSION   DASSYW010000112 DASSYW010000000
VERSION     DASSYW010000112.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2211)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2211)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2211
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1029253"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..300)
                     /locus_tag="VFN38_01795"
     CDS             complement(<1..300)
                     /locus_tag="VFN38_01795"
                     /inference="COORDINATES: protein motif:HMM:NF012451.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HET9010512.1"
                     /translation="MAQQDYYAVLGVPASATQDEIKKAYRKLAAKHHPDKNPTDPKAA
                     ETFKGISEAYQTLGDAEKRKQYDEMRRLGAFGGFGGGRGAGAGAGRGASYGYPPPG"
     gene            complement(317..868)
                     /locus_tag="VFN38_01800"
     CDS             complement(317..868)
                     /locus_tag="VFN38_01800"
                     /inference="COORDINATES: protein motif:HMM:NF013212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000774 - adenyl-nucleotide exchange
                     factor activity [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_function: GO:0051087 - protein-folding chaperone
                     binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HET9010513.1"
                     /translation="MSEENGYVNNLAADAAAQTTEPTDADPAVAEGLPDGVERQLADQ
                     RDRYLRLAAEYDNFRKRTARERQEAHVRGQGDMLKGMIDALDDLARFAHVDPATTDAR
                     TISDGVQMVEKKLMKTLAGHGLEVLDPIGQPFDPARHEAVMTEPASSADEDHLVSRVF
                     QQGYLFNGQLLRPARVVVKQWNG"
     gene            complement(984..>2211)
                     /locus_tag="VFN38_01805"
     CDS             complement(984..>2211)
                     /locus_tag="VFN38_01805"
                     /inference="COORDINATES: protein motif:HMM:NF001813.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="competence/damage-inducible protein A"
                     /protein_id="HET9010514.1"
                     /translation="LLGYTIDTNAAHLGRELAGLGVEIVRRTTCGDSAESIAAAVRDA
                     LDRSEGVITTGGLGPTSDDLTAASIGALFGRRMVLDEEHLAWMRDRWAKRWPERPMPQ
                     ANIQQAMRPEGSRKLVNHHGSAPGIFLEDDRGRWVAMLPGVPREMRGMLADTLLPLVR
                     ERLGDAQRVVRSRTLRSTGVAESAVADRIAAIPDGVGGVELAYLPNVEGVDLRLTVRG
                     VPPADADARLAAAAQRVRGAMGHAIYGEGEADLADVVLAACRARGLTLAVAESCTGGM
                     LGQRLTATAGSSDVVQGGVIAYANAVKQELLDVPEDLLRAHGAVSEPVARAMATGARA
                     RLHVGAALSVTGIAGPGGGTAEKPVGTVWIALDLDGTLESRLLRLWGDRDEIRRRATQ
                     AALELLRRALLPPHSD"
BASE COUNT          273 a          815 c          779 g          344 t
ORIGIN      
        1 gccggggggc ggatagccgt acgacgcacc gcgcccggcg cccgcgcccg cgccgcgccc
       61 gccgccgaag ccaccgaacg cgcccagacg gcgcatctcg tcatactgct tccgcttctc
      121 cgcatcgccc agcgtctgat aggcttcgga gatgcccttg aaggtctccg ccgccttggg
      181 atcggtggga ttcttgtcgg gatggtgctt cgcggcgagc ttgcggtagg ccttcttgat
      241 ctcgtcctgc gtcgccgatg ccggtacgcc gaggacggcg taatagtctt gctgggccat
      301 ggcggacctt acggggtcag ccgttccact gcttcacgac gacgcgcgcg ggtcgcagca
      361 gctggccgtt gaacaggtat ccctgctgga agacgcggga gaccagatga tcctcgtcgg
      421 ccgaggatgc gggctccgtc atcacggcct cgtggcgtgc cgggtcgaag ggttgcccga
      481 tgggatcgag cacctcgaga ccatggcccg ccagcgtctt catgagcttc ttctccacca
      541 tctgcacgcc gtcggagatg gtgcgtgcgt ccgtcgtcgc cggatcgacg tgggcgaacc
      601 gggcgaggtc gtcgagcgca tcgatcatcc ccttgagcat gtcgccctgg ccacgcacgt
      661 gcgcttcctg ccgttccctg gccgtgcgct tgcgaaagtt gtcgtactcg gcggcgagac
      721 ggagataccg atcgcgctga tcggcgagct gccgctcgac gccgtcgggc agcccctcgg
      781 cgacggcggg atcggcgtcc gtcggctcgg tggtctgtgc cgccgcgtcc gcggcgaggt
      841 tgttcacgta tccgttctct tctgacatgg tgcgggctgc cgcgggcgtg aggatgcgtc
      901 gtgacggaaa tgtcgccccg tgcgataccg ggtgcaacgc ccgtgccctg tgaatgctct
      961 cgcgcgctgc ccgcggggct gcgtcagtcg ctgtgcggcg gcaggagggc gcgccgcagc
     1021 agctccagcg ctgcctgcgt ggcgcgccgc cggatctcgt cgcgatcgcc ccagaggcgc
     1081 agcagccgcg actcgagcgt gccgtccagg tccagcgcga tccacaccgt gcccaccggc
     1141 ttttcggcgg tcccgccccc cggaccggcg atgcccgtga ccgagagggc ggcgccgacg
     1201 tgcaggcgcg ctcgcgcgcc ggtggccatc gcgcgggcca cgggctcgct gaccgcgccg
     1261 tgcgcgcgca gcaggtcctc gggcacgtcc agcagctcct gcttcacggc gttcgcgtag
     1321 gcgatcacgc cgccctgcac cacgtcgctg ctgccggcgg tggcggtcag ccgctgaccc
     1381 agcatgccgc cggtgcagct ctcggccacg gcgagcgtga gcccgcgcgc tcggcaggcc
     1441 gcgagcacga cgtcggcgag atcggcctcg ccttcgccgt agatcgcgtg gcccatcgcg
     1501 ccgcgcacgc gctgcgcggc ggcggcaagc cgcgcatcgg cgtcggcggg cggcacaccg
     1561 cgcaccgtga ggcgcaggtc caccccttcc acgttcggca ggtacgcgag ttcgacgccg
     1621 cccaccccat ccgggatcgc ggcgattcga tccgccaccg cggactcggc gacgccggtg
     1681 ctgcgcagcg tccgcgagcg cacgacccgc tgcgcgtcgc ccagcctctc acgcaccagc
     1741 ggcagcagcg tatcggccag catgccgcgc atctcgcgcg gcacaccggg cagcatcgcc
     1801 acccatcggc ctcggtcgtc ctcgaggaag atgccgggcg cggacccgtg atggttgacc
     1861 agcttgcgcg acccttcggg ccgcatcgcc tgctggatgt tggcctgcgg catgggacgc
     1921 tcgggccagc gcttcgccca gcggtcgcgc atccacgcga ggtgctcctc gtccagcacc
     1981 atgcggcggc cgaagagggc gccgatggag gccgccgtga ggtcgtcgct cgtgggtccg
     2041 agcccgccgg tggtgatcac cccttccgag cggtccagcg cgtcccgcac cgccgccgcg
     2101 atcgactcgg cgctgtcgcc gcaggtggtg cggcggacga tctccacgcc cagccccgcc
     2161 agctcgcgac ccaggtgcgc cgcgttggtg tcgatcgtgt agccgagcag g
//
LOCUS       DASSYW010000113         2953 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_421079, whole genome shotgun sequence.
ACCESSION   DASSYW010000113 DASSYW010000000
VERSION     DASSYW010000113.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2953)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2953)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2953
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_421079"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            7..843
                     /locus_tag="VFN38_01810"
     CDS             7..843
                     /locus_tag="VFN38_01810"
                     /inference="COORDINATES: protein motif:HMM:NF014658.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MqnA/MqnD/SBP family protein"
                     /protein_id="HET9010515.1"
                     /translation="MSQQRITVAHSPDSDDAFMFYGLASGAVDTGGLVVDQVLADIET
                     LNRAAFEGTYEVTAVSFHAFAHLAGKYALLPHGASMGDRYGPIVVARAGGPTAVKGTR
                     IAIPGTLTTAYLALRLYEPDFEYVVVPFDQIQQAVIEGDAAAGLLIHEGQLTYQDDGL
                     VKIVDLGEWWSDRTGGLPLPLGGNIIRRDLGPAMIAKVSKMLHDSIAHALSHRQEAVE
                     YALQFGRGLDRAKTDRFVGMYVNDLTLAYGDRGRRGVERLMNDAFENGLIPQRVPVEF
                     AA"
     gene            complement(851..1402)
                     /locus_tag="VFN38_01815"
     CDS             complement(851..1402)
                     /locus_tag="VFN38_01815"
                     /EC_number="3.2.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005934810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008725 - DNA-3-methyladenine glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HET9010516.1"
                     /translation="MSRCAWAQTPLSIAYHDEEWGVPVHDDVVLFEFITLEGAQAGLS
                     WETILRKRDAYRHAFAGFDPAKVARFTPARVEKLMQDPGIVRNRLKIDSTISNASAFL
                     AVQREFGSFDEYVWRFVGGKPIVNRRRSMKEVPVKTPASDALSTDLLKRGFRFVGSTI
                     CYAFMQAVGLVDDHTDDCFRRRR"
     gene            complement(1492..>2953)
                     /locus_tag="VFN38_01820"
     CDS             complement(1492..>2953)
                     /locus_tag="VFN38_01820"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HET9010517.1"
                     /translation="RDHPATLVWSEALDEGDLRNKVSHRDKVMTLPAPFTATPTEIAK
                     TQWRYGGLSVTDKGVMLLSESDRETRRVRTSILDGSAPPRTLWERRQQDAYGDPGFPL
                     MVRRTGGARPGPAGVILQNGDDIYLSGQGASPEGDRPFLDRLNLKTLKTDRLFRAEAK
                     TLESIVAPLDNDMRSLLTLYQTPADPPNYFVRDVAAGTKKAVTSFKDPAPQFAGVAQQ
                     FLTYKRKDGIDLTATLYLPPGYKKGERLPVVMWAYPTEFTDPADASQVVGSPYRFTRP
                     SGSSHLFLLLHGYAIVDDPKMPIVGPGETANDTYVDQLVASAQAAIDKVVDLGVGDRD
                     RVGVGGHSYGAFMTANLLAHSDLFRAGIARSGAYNRTLTPFGFQAERRTFWEVPDIYG
                     RMSPFFHANRINEPILLLHGEMDNNSGTFPIQSERLYMALKGHGASVRYVTLPYESHG
                     YAARESVLHTLAEMINWLDKYVKSPQPRTTTTAGVK"
BASE COUNT          469 a          986 c          997 g          501 t
ORIGIN      
        1 tgacccatgt cacaacagcg aatcacggtc gcgcacagtc cggactcgga cgatgcgttc
       61 atgttctacg gtctggcgag cggcgccgtc gataccggcg gcctcgtcgt cgatcaggtg
      121 ctcgccgaca tcgagaccct gaaccgcgcg gctttcgagg gcacatacga ggtcaccgcg
      181 gtctcgttcc acgccttcgc gcaccttgcc gggaagtacg cgctgctccc gcacggcgcc
      241 agcatgggcg atcgctacgg cccgatcgtc gtcgcgcgcg cgggcgggcc gacggcggtc
      301 aagggcacgc gcatcgccat ccccgggacg ctgaccaccg cctacctggc gctgcgcctc
      361 tatgagcccg acttcgaata cgtcgtggtc ccgttcgacc agatccagca ggcggtgatc
      421 gagggcgacg ccgcggccgg cctgctgatc cacgaaggac agctcaccta tcaggacgac
      481 gggctggtaa agattgtcga cctcggcgaa tggtggtcgg accgaaccgg cggcctgccg
      541 ctgccgctcg gcggcaacat catccgccgc gatctcgggc cggcgatgat cgccaaggtg
      601 tcgaagatgc tgcacgacag catcgcgcac gcgctgtcgc accgccagga ggcggtcgag
      661 tacgcgctgc agttcgggcg cggcctcgac cgcgccaaaa ccgatcgctt cgtcgggatg
      721 tacgtcaacg atctgacgct ggcgtacggc gaccgcggcc gccgcggggt cgagcgcctg
      781 atgaacgacg ccttcgagaa cggcctgatc ccgcagcgcg tgccggtcga attcgcggcc
      841 tgagcgacgg ctagcggcgt cgtctgaagc agtcgtccgt gtggtcgtcg accaggccca
      901 cggcctgcat gaacgcgtag cagatcgtcg agccgacgaa ccggaagccg cgcttcagca
      961 ggtccgtgct gagcgcgtcc gacgccggcg tcttcacagg cacctccttc atcgatcggc
     1021 ggcggttgac gatcggcttt ccgccgacga accgccagac atactcgtcg aagctgccga
     1081 attcgcgctg cacggcgagg aacgccgacg cgttggaaat cgtgctgtcg atcttcaggc
     1141 ggttgcgcac gatgccggga tcctgcatca gcttctcgac gcgcgccggc gtgaagcgcg
     1201 cgaccttcgc cgggtcgaag ccggcgaacg cgtggcggta ggcgtcgcgt ttgcggagaa
     1261 tcgtctccca gctcaggccg gcctgcgcgc cttcgagtgt gatgaactcg aagagcacca
     1321 cgtcgtcgtg caccggcacg ccccattcct cgtcgtgata ggcgatgctc agcggtgtct
     1381 gcgcccaggc gcagcgtgac acctctttcg tggcgtgccg gctcacgagg tcacgccctc
     1441 gccgtgcgcc gcaaggcgca gcggggagac gccgaggcga ccacgagcac cctatttgac
     1501 ccctgccgtc gtggtcgtcc tgggctgcgg gctcttcaca tacttgtcca gccagttgat
     1561 catctcggca agggtgtgca gcacggactc gcgcgccgcg tagccgtgcg actcgtacgg
     1621 cagggtgacg tagcgcacgc tcgcgccgtg ccccttcagc gccatgtaga ggcgctcgga
     1681 ctggatcggg aacgtgccgg agttgttgtc catctcgccg tggagcagca ggatcggctc
     1741 gttgatccgg ttcgcgtgga agaacggcga catccggccg tagatgtcgg gcacttccca
     1801 gaacgtgcgg cgctcggcct ggaagccgaa cggcgtcagc gttcggttat aggcgccgct
     1861 gcgcgcaatg ccagcgcgga acagatccga gtgcgcgagc aggttcgccg tcatgaacgc
     1921 accgtagctg tggccgccga cgccgacgcg gtcgcgatcg ccgaccccaa gatccacgac
     1981 cttgtcgatc gccgcctggg cgctggcgac gagctgatcg acgtacgtat cgttcgccgt
     2041 ttcgccgggt ccgacgattg gcattttcgg atcgtcgacg atcgcgtagc cgtgcaggag
     2101 caggaacaga tgcgatgatc cgctcggacg ggtgaagcga tacggcgagc ccacgacctg
     2161 cgaggcgtcc gcgggatcgg tgaactccgt gggatacgcc cacatgacga ccggcagccg
     2221 ctcgcctttc ttgtagcctg gcggcaggta gagcgtggcg gtcagatcga tgccgtcctt
     2281 ccgcttgtag gtgaggaact gctgcgcgac gccggcaaac tgcggtgccg gatccttgaa
     2341 gctggtaaca gccttcttcg taccggccgc gacgtcacgg acgaagtagt tcgggggatc
     2401 ggcgggcgtc tgatagagcg tgagcagcga tcgcatgtcg ttgtcgagcg gggccacgat
     2461 cgactcgagc gtcttcgcct cggcgcggaa caggcggtcg gttttcagcg tcttcaggtt
     2521 cagcctgtcg aggaacggcc gatcgccttc gggcgacgcg ccctggcccg agagatagat
     2581 gtcgtcgccg ttctgcagga tcacgcccgc gggaccgggc ctggcgccgc ccgtgcggcg
     2641 caccatcagc gggaacccag ggtcgccgta ggcgtcctgc tgccgacgct cccacagggt
     2701 tctcggtggc gcgctgccgt cgagaatcga cgtgcgcacg cggcgcgtct cccgatccga
     2761 ctcgctcagc agcatcacac ccttgtcggt caccgacagg ccgccgtatc gccactgcgt
     2821 cttggcaatc tcggtcgggg tggccgtgaa cggcgccggg agcgtcatca ctttgtcgcg
     2881 gtgcgacact ttgttccgca gatcgccctc atcgagcgcc tcgctccaca ccagcgtcgc
     2941 ggggtgatcg cgc
//
LOCUS       DASSYW010000114         2097 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_494727, whole genome shotgun sequence.
ACCESSION   DASSYW010000114 DASSYW010000000
VERSION     DASSYW010000114.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2097)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2097)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2097
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_494727"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1294)
                     /locus_tag="VFN38_01825"
     CDS             complement(<1..1294)
                     /locus_tag="VFN38_01825"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HET9010518.1"
                     /translation="MHRISLTSACRTAILATSMSLLAPAGHRLAAQAAGGDVRGTITL
                     AGTATPLAGARVGVGSPARAAITDERGAYVLRRLPAGRHELVVTALGREPVRDTVTVR
                     SGETTRHDVALRTGSLLLSSVIVSATRTPTVASQVASTVNVLGPEQIAASPARETQDL
                     LREIPGVELPRTSSLVGGTAQIVSIRGVDEGRTAVLFDGVPINDAWGEWIDWGRAPKG
                     MIDRVEVVEGGSSHLYGNGAIGGTISFYSRPLAPGAVNALVESGSRDARHAFVAAGVP
                     LLGALSANVSADYQQGGGYTLLDPAVRGTVDLPSAIIQRNAYLRLNYAPSAVWSASVT
                     GHLFGDSRNTGTPLSFQSRDQKDVQVGLDHADLAGGTFSLRGWNGRQDELNRSSSIRA
                     GRAVEDSSVIADIPSHDWGASALWTRESVLHLASFTVGG"
     gene            1516..>2097
                     /locus_tag="VFN38_01830"
     CDS             1516..>2097
                     /locus_tag="VFN38_01830"
                     /inference="COORDINATES: protein motif:HMM:NF013703.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_function: GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HET9010519.1"
                     /translation="MDGPLGPAVWKLAWPTMLTNVIGGLQGIVDHVLVGHFVGFTGNA
                     AIGVANQIFIVVIVFIMSLFTGMSVLVARFAGANDEEKVNRTVYQAFITAVGLSFFVM
                     APLGYLASPYLLEFVNAAPGVKAEALPFLRIMFAFSTGMLIFFMLSGALRSAGDARTP
                     MIMGVALTVLNVLFNLVLIQGLGPVPAFRTAGAA"
BASE COUNT          295 a          753 c          730 g          319 t
ORIGIN      
        1 cgccgccgac cgtgaacgac gcgaggtgca gcacgctctc gcgcgtccag agcgccgagg
       61 cgccccagtc gtggctcggg atgtcggcga tcacgctcga gtcctccacg gcgcggccgg
      121 cgcggatgct cgacgatcga ttgagctcgt cctgccgtcc gttccacccg cgcagggaga
      181 aggtgccgcc cgcgaggtcg gcgtggtcga gcccgacctg cacgtccttc tggtcacgcg
      241 actggaacga gagcggcgtg cccgtgttgc gactgtcccc gaacaggtga ccggtcaccg
      301 acgccgacca cacggccgag ggtgcgtagt tcagccggag ataggcgttg cgctggatga
      361 tcgccgacgg caggtccacc gtcccgcgca cggcgggatc gaggagcgtg tagccgccgc
      421 cctgctggta gtccgcgctg acgttcgcgc tcaacgcacc gaggagcggg acaccggcgg
      481 ccacgaaggc gtggcgggcg tcgcggctgc cgctctccac gagcgcgttc accgcgccgg
      541 gggcgagcgg ccgcgaatag aaggagatcg tgcctccgat cgcgccgttg ccgtacaggt
      601 gggagctgcc cccttccacg acctccacgc ggtcgatcat ccccttgggc gcgcgacccc
      661 agtcgatcca ctcgccccag gcgtcgttga tcggcacgcc gtcgaacagc acggcggtgc
      721 gcccctcgtc cacgccgcga atggacacga tctgcgccgt gccgcccacg aggctgctcg
      781 tcctcggcag ctcgacgccg ggaatttcgc gcagcaggtc ctgcgtctcg cgcgccgggc
      841 tcgcggcgat ctgttccgga ccgaggacgt tgacggtcga cgcgacctga ctcgccacgg
      901 tcggcgtgcg cgtcgcggag acgatcacgc tggagagcag cagcgatccc gtgcgcaggg
      961 cgacgtcgtg ccgggtcgtc tcgccagagc gcacggtcac cgtgtcgcgc accggctcgc
     1021 gtccgagcgc cgtcaccacc agctcgtggc gcccggcagg gagccggcgc agcacgtacg
     1081 cgccacgctc atccgtgatg gcggcgcgcg ccggcgagcc gacacccacc cgggcgccgg
     1141 cgaggggcgt cgccgtgccc gccagcgtga tcgtgccgcg gacatcgccg cccgcggctt
     1201 gtgcggcgag gcggtggccg gccggcgcga ggagcgacat cgacgtcgcc aggatcgcgg
     1261 tgcgacacgc ggaggtgagc gagatccgat gcatgagggc gcggcgttga gagaggcagc
     1321 aggctcggcg cgggaacccg cgccgtccct ggccaataac ttatcgcgcc gtatcatccg
     1381 gcaccgcccg ccgagacgct tttccgcacc gccgccgatt ccttcgtgac cgacgccgcc
     1441 gcgcccgcag agttcgacgc ttccgtatcg ccaccggagc cgcccgcgaa agccgggcgg
     1501 tacgaccggt cgatcgtgga cgggccactg gggccggccg tgtggaagct ggcgtggccc
     1561 acgatgctca ccaacgtgat cggcggcctc caggggatcg tcgaccacgt gctcgtcggc
     1621 catttcgtcg gcttcaccgg caatgccgcc atcggcgtcg cgaaccagat cttcatcgtc
     1681 gtcatcgtat tcatcatgtc gctgttcacg ggcatgagcg tgctcgtcgc acggttcgcc
     1741 ggggcgaacg acgaggagaa ggtgaaccgc acggtctacc aggccttcat cacggccgtc
     1801 gggctgtcgt tcttcgtgat ggcgccgctg ggatacctcg cgtcgcccta cctgctcgaa
     1861 ttcgtgaacg cggcacccgg cgtgaaggcg gaggcgctgc ccttcctgcg gatcatgttc
     1921 gccttcagca ccggcatgct gatcttcttc atgttgagcg gggcgctccg ctcggccggc
     1981 gacgcacgca cgccgatgat catgggtgtg gcgctcacgg tgctcaacgt cctgttcaat
     2041 ctcgtgctca tccaggggct cggtcccgtg cccgccttcc gcaccgccgg cgcggcg
//
LOCUS       DASSYW010000115         4321 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_218322, whole genome shotgun sequence.
ACCESSION   DASSYW010000115 DASSYW010000000
VERSION     DASSYW010000115.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4321)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4321)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4321
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_218322"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            195..1352
                     /locus_tag="VFN38_01835"
     CDS             195..1352
                     /locus_tag="VFN38_01835"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HET9010520.1"
                     /translation="MALLKPTAVNTILADVRRVQAAGTSVVSLMRGEPDFRTPDHIAE
                     AVVAAVKAGRTGYPDNRGEIRFREAVAAKLARDNGVSYDPGTEVLATTGATLGLACAL
                     TAVVGDGDDVLLPDPIYDAYHSPIALAGGRSRPVRAPIAADRFELPVDALEAAVTPAT
                     RVLLLNTPWNPVGTVFRRDELEALAAFVVRRNLLLISDEIYETIVFDGHRHICPASLS
                     PELRARTIVVNSLSKTYAMPGWRVGYCAAPAGIIQAMFLVLQQWSRGPATFIQDAAAA
                     ALSGTQEPTLAMQREYAARRAQVIEALQGIPKVRVLSPEGGFFAMVDVRGTGRTSNDV
                     RLHLLEQHGVVVAHGSAYGPGGEGTLRVSFASGGDNLTRGLERLRAGLLSL"
     gene            1363..4305
                     /locus_tag="VFN38_01840"
     CDS             1363..4305
                     /locus_tag="VFN38_01840"
                     /inference="COORDINATES: protein motif:HMM:NF014910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /protein_id="HET9010521.1"
                     /translation="MTLLKVDAVQPLPQADPSRVDAAAFERALRERTTAEVRFDAVSR
                     ALYATDASVYKLRPLGVALPRTREDLIQIVRLCAQFGCPITLRGGGTSQCGQAIGTGL
                     VVDTSKHLNAVLEVNVAERWARVEPGIVLDELNAQLRPHGLRFAPDVSTASRATVGGM
                     MANNSSGARSVYYGKTIDHVIEQDVVLSDGTVTHFGPLTPGAVDAACDGDSLEARCYR
                     TIRDLARTHADEVERRYPKVLRRVMGYNLDEFTRADRPFNLAKLLVGSEGTLGVVLAA
                     KINLVPLPKAKAVLAIQFTELLDALGAAPLILRHTPSAVEVMDGFILDYTRQSAALTA
                     MRDSFIEGNPGALLCVEFYADEASELPPRLQALEADLRAHHFGYRYVHALDLPTQARV
                     WGLREAALGLSMAMKDDAKSLSFVEDTAVPPERLRDYIARFLAIIRGHGTTAGVYAHA
                     SVGCLHVRPVVNLKTEEGVQRFESLANDVADLVLEFGGALSGEHGDGLVRSPFMRKMF
                     GPVIYDAFRTIKHTFDPAGLLNPGKIVDAGPMTSNLRFGAGYVTPRPDTVFDYDEYGG
                     FGGAVEMCSGVGACRKTLEGTMCPSYMATHDEQHTTRGRANVLRLAMAGRLGDAGLDD
                     DGVYDTLDLCLECRACKAECPVGVDMARYKSEFLAGYWQRHGTSLEARALGNARTMAR
                     LGSAFAPLSNLVAHSAPGRAVAERLLGLDRRRRLPAFQRRTFAKRAGAAARRPPQEAR
                     ALLFVDTFTNHYDPEIGLAALDVLEAAGVPTGLAPNGCCGRPQISKGLLHDAQALAAA
                     NADRLHDAAEAGQPIVFCEPSCLSAVREDAPALLRGEARRKAQAVARASVLFEEYVAS
                     LGAVLPLAAGPSRVLLHGHCHQRSMGLVPPAKTLLSRIPGVTVTDAEAGCCGMAGSFG
                     YGRDHYEVSKAIGERRLFPAVRAQGDGAVVAAGGTSCRHQIHDFTGVEAVHPAVLLRS
                     LLLERSGS"
BASE COUNT          609 a         1571 c         1516 g          625 t
ORIGIN      
        1 gggcagatgg cgcggtcgat cgggcattaa gtagaagtgg cgattcgggg ggccgcagcg
       61 attatccggc aacattgctg atcggtcaat gatttgcggc gatcttgccg ttgtggggac
      121 gccgggcccg ccccacctgt ggtacaagca aaccctgctc gatgtcgatc ctcgatcaca
      181 ccttggcgcc tcgcgtggcg ctgctcaagc ccaccgcggt caacaccatc ctggcggacg
      241 tgcgccgtgt gcaggcggcg ggcacctcgg tcgtctcgct catgcgcggc gaaccggatt
      301 tccgcacgcc ggatcacatc gccgaggccg tcgtggcggc ggtcaaggcc gggcgcacgg
      361 ggtatcccga caaccgcggc gagatccgct ttcgtgaagc cgtcgccgcc aagctggcgc
      421 gcgacaacgg cgtgtcctac gacccgggca cggaagtgct ggccaccacc ggcgccacgc
      481 tcggcctggc ctgtgccctg accgccgtcg tcggcgacgg cgacgacgtg ctgctgccgg
      541 atccgatcta cgacgcctac cattcgccca tcgcgctggc cggcggccgg tcccgcccgg
      601 tgcgcgcgcc gatcgccgcc gaccgcttcg agctgccggt cgacgcgctc gaggcggccg
      661 tgacgcccgc cacgcgcgtg ctgctactga atacgccctg gaatccggtg ggcacggtgt
      721 tccggcgcga cgaactggag gcgctggcgg cgttcgtcgt ccgccgcaac ctgctgctca
      781 tcagcgacga gatctacgag acgatcgtct tcgacggcca ccggcacatc tgcccggcaa
      841 gcctgtcgcc cgagttgcgc gcccgcacga tcgtcgtcaa cagcctgtcg aagacctatg
      901 cgatgcccgg ctggcgcgtc ggctactgcg cggcaccggc gggcatcatt caggcgatgt
      961 tcctggtgct ccagcagtgg agccgcggcc cggccacgtt catccaggac gccgccgcgg
     1021 cggcgctctc cggcacgcag gaacccacgc tggcgatgca gcgcgagtac gccgcccgcc
     1081 gcgcgcaggt gatcgaggcg ttgcagggca tccccaaggt gcgcgtgctg tcgccggagg
     1141 gcggcttctt cgcgatggtg gacgtgcgcg ggaccgggcg cacctcgaac gacgtgcggc
     1201 tgcacctgct cgagcagcac ggcgtcgtcg tggcccacgg atcggcctac gggcccggcg
     1261 gcgagggcac gctgcgcgtg tcgttcgcga gcggcggcga caacctgacg cgcgggctcg
     1321 agcggctgcg cgccgggctc cttagtctgt agtgcccagc ctgtgaccct gctcaaggtc
     1381 gacgcggtcc agccgctgcc ccaggcagac ccgtcgcgtg tggacgcggc cgcgttcgag
     1441 cgcgccctgc gcgagcggac caccgcggag gtacgcttcg acgccgtctc gcgcgccctc
     1501 tacgccaccg acgccagcgt ctacaagctg cgtccgctgg gcgtcgcgct gccacgaacg
     1561 cgcgaggacc tgatccagat cgtccgcctc tgcgcgcagt tcggctgccc gatcaccctg
     1621 cgcggcggcg gcacgtcgca gtgcgggcag gccatcggca ccgggctcgt cgtggacacg
     1681 tcgaagcacc tcaacgcggt gctcgaggtg aacgtcgccg agcgctgggc gcgcgtggag
     1741 cccgggatcg tcctcgacga gctgaacgcg cagctgcggc cgcacggcct gcggttcgcg
     1801 cccgacgtct ccaccgccag ccgcgccacc gtgggcggca tgatggccaa caactcgagc
     1861 ggcgcccggt ccgtgtatta cggcaagacg atcgaccacg tcatcgagca ggacgtcgtg
     1921 ctgtcggacg gcacggtgac gcacttcggg ccgctgacgc ccggggcggt cgacgccgcc
     1981 tgcgacggcg acagcctcga ggcgcgctgc taccgcacca tccgggacct ggcgcgcacg
     2041 cacgccgacg aagtggaacg ccgctacccg aaagtgctgc ggcgcgtcat gggctacaac
     2101 ctcgacgagt tcacgcgcgc cgaccgcccg ttcaacctgg cgaagctgct ggtgggctcc
     2161 gagggcacgc tcggcgtcgt gctggccgcc aagatcaacc tggtgccgct gccgaaagcc
     2221 aaggcggtgc tggcgatcca gttcacggag ctgctcgacg cgctcggcgc cgcgccgctc
     2281 atcctgcgcc acacaccctc ggcggtcgag gtgatggacg gcttcatcct cgactacacg
     2341 cgccagagcg ccgcgctgac ggcgatgcgc gacagcttca tcgaagggaa tcccggcgcg
     2401 ctgctctgcg tggagttcta cgccgacgag gcctcggaac tgccgccccg cctgcaggcg
     2461 ctcgaggctg acctgcgcgc gcaccacttc ggctaccgct acgtgcacgc cctggatctg
     2521 ccgacgcagg cacgcgtctg gggcctccgc gaagcggccc tcggcctgtc gatggcgatg
     2581 aaggacgacg ccaagtcgct gtcgttcgtc gaggacacgg cggtgccgcc cgaacggctg
     2641 cgcgactaca tcgcgcgctt cctcgccatc atcaggggcc acggcacgac ggccggcgtc
     2701 tacgcgcacg cgtcggtcgg ctgcctgcac gtgcggccgg tcgtgaacct gaagaccgag
     2761 gagggcgtcc agcggttcga gtcgctcgcc aacgacgtcg ccgacctcgt gctcgaattc
     2821 ggcggcgcgc tctccggcga gcacggcgac gggctggtgc gcagcccgtt catgcggaag
     2881 atgttcgggc cggtcatcta cgacgccttc cgcacgatca agcacacctt cgatccggct
     2941 ggtctcctca accccggcaa gatcgtggac gccgggccga tgacgtcgaa cctgcgcttc
     3001 ggcgccggct acgtcacgcc gcgccccgac acggtcttcg actacgacga gtacggcggc
     3061 tttggcggcg ccgtcgagat gtgcagcggc gtgggggcgt gccgcaagac gctcgagggg
     3121 acgatgtgcc cctcgtacat ggcgacccac gacgagcagc acaccacacg gggccgcgcc
     3181 aacgtgctgc ggctggccat ggccggacgg ctcggcgacg cggggctcga cgacgacggc
     3241 gtgtacgaca cgctcgatct ctgcctcgaa tgccgggcgt gcaaagccga gtgtccggtc
     3301 ggcgtggaca tggcccgcta caagagcgag ttcctcgccg gctactggca gcgccatggc
     3361 acgtcgctcg aggcgcgcgc gctcggcaac gcccgcacca tggcgcggct ggggagcgcc
     3421 ttcgcgccgc tgtcgaacct ggtcgcgcac agcgcgccgg gacgcgctgt cgccgagcgg
     3481 ctgctcggcc tcgatcgccg ccggcggctg ccggccttcc agcgccgcac cttcgcgaag
     3541 cgcgccggcg ccgccgcacg ccgcccaccg caagaggcac gagcgctcct gttcgtggac
     3601 accttcacga atcactacga ccccgagatc ggcctggccg cgctggacgt gctcgaggcg
     3661 gccggcgtcc cgaccgggct ggcgcccaac ggctgctgcg ggcggccaca gatttcaaaa
     3721 gggctgctcc acgacgcgca ggcgctggcg gcggccaacg ccgatcggct ccacgacgcg
     3781 gccgaggcgg gccagccgat cgtgttctgc gagccgagct gcctgtcggc cgtccgcgaa
     3841 gacgcgccgg cgctgctgcg cggcgaggcg cggcgcaaag cgcaggccgt ggcccgggcg
     3901 agcgtgctgt tcgaggagta cgtcgccagt ctcggcgcgg tgctgccact cgcggccggc
     3961 ccgtcgcgcg tgctgcttca cggtcactgc caccagcggt cgatggggct cgtgccgccg
     4021 gcgaagacgc tcctgtcccg cattcccggc gtgaccgtca ccgacgccga agcggggtgc
     4081 tgcggcatgg ccgggtcgtt cggctacggc cgcgaccact acgaggtgtc gaaagccatc
     4141 ggcgagcggc ggctctttcc cgccgtccgc gcacagggcg acggcgccgt ggtggcggcc
     4201 ggcggcacgt cgtgccgcca tcagattcac gacttcacgg gcgtcgaggc ggtgcatcca
     4261 gcggtgctcc tgcgttcgct ccttctggaa aggtccggtt catgaacctg gcgtggctgt
     4321 c
//
LOCUS       DASSYW010000116         2416 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_347232, whole genome shotgun sequence.
ACCESSION   DASSYW010000116 DASSYW010000000
VERSION     DASSYW010000116.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2416)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2416)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2416
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_347232"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            27..2294
                     /locus_tag="VFN38_01845"
     CDS             27..2294
                     /locus_tag="VFN38_01845"
                     /inference="COORDINATES: protein motif:HMM:NF039587.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate binding family 9 domain-containing
                     protein"
                     /protein_id="HET9010522.1"
                     /translation="MLIPLLSAFQLAAAAQPAVYNGRLNQTAVALPKIEATVVVDGRL
                     DEAAWSSAAILDGFSLYQPADGRPAPDSTQVRVWYSSDAIHFGIRAFAEPGTVAATLA
                     DRDRIGSDDNIELHLDTFHERNRAFVFIVNPLGIQADGTKSEGGGFIPGSNVGPGQND
                     LSADFVWDSRGRLTPWGFEVEVRIPFESLRYPSKSVQTWGLQIDRHVQRNGYEETWTP
                     ARRASASFIAQSGTLEGLTGMRHGQVAELNPEFTNTTRGTACCAPALDQWSYSSHPQL
                     GGNARWAMGSNFVLNGTVKPDFSQVEADATQVAADERFALFYPEKRPFFVEALDQFNV
                     PNQLVYTRTIVQPDAAVKLTGKLARADVALLSSRDQGRFADIVRLRQGIGEQSQAGLV
                     YSDRVGQGRTNRIVGADTKLVFGRIYFASLQAVQSFTSENGASTSGPMWEAVVDATNR
                     GWGFHYNVLGIHPDFRTDNGFVPRTGYVKPNAANRFTWYGQPGAFAERFNLFLNANGI
                     WRYDDFFHARSLLEDVASAQMQLTLRGGWSVGMTPRVGSYAFDPASYASYGAGFTPSD
                     RIGAATSTFSIATPQFRKFNASASTNVGNDVDFLETSRVRRVDYSASLDLRPSERLRV
                     NATYASTSFRRRSDGQRSAFARIPRFRMEYQLARPLFVRVVSQYTATRREALLDPRTG
                     TVIVVGPAPSTATSSNVLRTDWLVSYRPAPGTVFFAGYGGSMSEQDPLAFQRLRRTGD
                     AFFVKGSYVFRLSGL"
BASE COUNT          345 a          872 c          839 g          360 t
ORIGIN      
        1 ccggagcgca cgattagttt gcgtgcgtgc tcatcccact cctctctgcc ttccagctcg
       61 ccgccgctgc ccagcccgcg gtctacaacg gccgcctgaa ccagaccgcc gtcgccctcc
      121 cgaagatcga ggcgaccgtc gtcgtcgacg gccgcctcga cgaagccgcg tggtccagcg
      181 ccgccatcct cgacggcttc tccctctacc agcccgccga cggccggccc gcgcccgact
      241 ccacccaggt gcgcgtctgg tactcttccg acgccatcca tttcggcatc cgggcgttcg
      301 ccgagccggg gacggtggcc gcgacgctcg ccgaccgcga ccgcatcggc agcgacgaca
      361 acatcgagct ccacctcgac accttccacg agcgcaaccg cgccttcgtg ttcatcgtca
      421 acccgctcgg catccaggcc gacggcacca agagcgaggg cgggggcttc atccccggct
      481 ccaacgtggg cccgggccag aacgacctga gcgccgactt cgtgtgggac tcgcgcgggc
      541 ggctcacgcc gtggggcttc gaggtggagg tgcgcatccc cttcgagagc ctccgctacc
      601 cgtcgaagtc ggtgcagacg tgggggctcc agatcgaccg ccacgtgcag cgcaacggct
      661 acgaggagac gtggaccccc gcgcgccggg cgtcggcgtc gttcatcgcg cagtcgggga
      721 cgctcgaggg gctcaccggg atgcggcacg ggcaggtggc ggagctcaac ccggagttca
      781 ccaacaccac gcgcggcacg gcgtgctgcg cgccggcgct cgatcagtgg tcgtactcct
      841 cgcatcccca gctcggcggc aacgcgcggt gggcgatggg gagcaacttc gtgctcaacg
      901 gcacggtgaa gccggacttc tcgcaggtgg aggccgacgc cacccaggtg gccgccgacg
      961 agcgcttcgc gctgttctac ccggagaagc ggcccttctt cgtggaggcg ctcgaccagt
     1021 tcaacgtgcc gaaccagctc gtctacacgc gcaccatcgt ccagcccgac gcggcggtga
     1081 agctcaccgg caagctcgcg cgcgcggacg tcgcgctgct ctcgtcgcgc gaccaggggc
     1141 ggttcgccga catcgtgcgg ctgcgccagg ggatcgggga gcagtcgcag gcgggcctgg
     1201 tgtacagcga ccgggtgggg caggggcgga cgaaccgcat cgtgggagcg gacacgaagc
     1261 tcgtgttcgg gcgcatctac ttcgcgtcgc tccaggcggt gcagagcttt acctccgaga
     1321 acggcgcctc cacgtcgggg ccgatgtggg aggcggtggt ggacgccacc aaccgcgggt
     1381 gggggttcca ctacaacgtg ctcggcatcc atcccgactt ccgcaccgac aacgggttcg
     1441 tgccgcgcac cggctacgtg aagccgaacg cggcgaaccg gttcacctgg tacggccagc
     1501 cgggcgcctt cgccgagcgg ttcaacctct tcctcaacgc caacgggatc tggcggtacg
     1561 acgacttctt ccacgcgcgc tcgctgctgg aggacgtggc gtcggcgcag atgcagctca
     1621 cgctgcgcgg gggctggagc gtggggatga cgccgagggt ggggagctac gcgttcgatc
     1681 cggcgagcta cgcgagctac ggcgccggct tcaccccgtc ggaccgcatc ggggcggcga
     1741 cgagcacctt cagcatcgcg acgccgcagt tccggaagtt caacgcgtcg gcctcgacga
     1801 acgtggggaa cgacgtggac ttcctggaga cgtcgcgggt gcggcgcgtg gactacagcg
     1861 cctcgctgga cctgcggccg agcgagcggc tgcgggtgaa cgccacgtat gcgtccacct
     1921 cgttccggcg gcgctcggac ggccagcgct ccgccttcgc gcgcatcccg cggttcagga
     1981 tggagtacca gctcgcgcgg ccgctgttcg tgcgggtggt gtcgcagtac accgccaccc
     2041 gccgcgaggc gctgctcgat ccgcgcacgg gcacggtgat cgtggtgggc cccgccccct
     2101 cgaccgcgac gtcgtcgaac gtgctgcgga cggactggct ggtctcgtac cggcccgcgc
     2161 cggggacggt gttcttcgcg gggtacggcg ggagcatgag cgagcaggat ccgctcgcct
     2221 tccagcggct gcggcgcacc ggggatgcct tcttcgtcaa ggggagctac gtgttccggc
     2281 tcagcgggct ctgagagccc gcctcgatcc gggcgtcatc gagcacgacc tgtcctggcg
     2341 ccgcagtccg gcctgacggc ggagccgtcg tcaggcacgg cgcacccccc gctcttgatc
     2401 tccgtcccct cccgcc
//
LOCUS       DASSYW010000117         2345 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_752823, whole genome shotgun sequence.
ACCESSION   DASSYW010000117 DASSYW010000000
VERSION     DASSYW010000117.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2345)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2345)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2345
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_752823"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..619
                     /locus_tag="VFN38_01850"
     CDS             <1..619
                     /locus_tag="VFN38_01850"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HET9010523.1"
                     /translation="LVPKLPRETEVLIAISNFFVRWWYLILGIPAAAIILGFVFGRTN
                     EKAHRAIDELALKLPLLGDMRQKIILARFSTYFAMLYRAGISVLDCIQICEKIVGNRV
                     MEEGLQRVGRSISEGQGISQAFFATKLFPPLVLRMLRVGESTGGLDAALLNVSYFYNR
                     EVREGIQRMQAMLGPATTVVLGMLIVGILYAIFLPIYDVIGKIKF"
     gene            621..2240
                     /locus_tag="VFN38_01855"
     CDS             621..2240
                     /locus_tag="VFN38_01855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010524.1"
                     /translation="MRHFPYLTNTRMVSLVSQRRRIVARREFAVSGAGAQAFEHYLAN
                     LKDVPTQLFTDLAEEDFRLDTIPHVGARDRDAILQRKLTQIFRNTPYRHALLQGREPE
                     GRRDDRVFYTAITNPELLRVWLEMLERLRVPLEGIHSAAMFSGVLLEELDLVFAHTLL
                     VTFTPGDAMRQSYFRDREIKFSRITPIDLEEGQSLGTMIAEETTRTWQYLDSLRNFAP
                     EDRLEVCILVHPNDRRVVEPELRNFAQLQYHVLDIEQVAQKLGLKPAPLDSTAEEVMV
                     HLFLLRRAENHFAGEELRRHATLRRARIALTQVSLALVAASIAWAGWNLAPALKATEA
                     DLRVTQQVAALDRENNEILKSLPSFGVGGSTMRDAVSFYNGAIRGFPTLAGFVVPLSG
                     VLREHPAVRVTQLAWLATDDAKATPRLARTLPREAPPVRSTAKAPEAPVAAVPDDAPN
                     PPFAGGRYEVALIEGSLRVPANDFRGALAEVEKLAADIARVEGFHADVVEGPLDVSPT
                     QQIQGRLTERGAATMETRFVLRVVRERQAPA"
BASE COUNT          344 a          867 c          787 g          347 t
ORIGIN      
        1 gctggtgccc aagctgccgc gcgagaccga ggtcctgatc gccatctcca acttcttcgt
       61 gaggtggtgg tacctcatcc tcggcatccc cgcggccgcg atcatcctgg gcttcgtgtt
      121 cggccgcacc aacgagaagg cgcaccgcgc catcgacgag ctggcgctca agctgccgct
      181 gctgggcgac atgcgccaga agatcatcct cgcgcgcttc tccacctatt tcgccatgct
      241 ctaccgcgcc ggcatcagcg tgctcgactg catccagatc tgcgagaaga tcgtcggcaa
      301 ccgcgtgatg gaggaagggc tgcagcgcgt gggccgcagc atctccgagg ggcagggcat
      361 ctcccaggcg ttcttcgcca ccaagctctt cccgccgctg gttctgcgca tgctgcgcgt
      421 gggcgagtcg accgggggcc tggacgcggc gctgctcaac gtgagctact tctacaaccg
      481 cgaggtgcgc gagggcatcc agcgcatgca ggcgatgctg gggcccgcga ccacggtggt
      541 cctgggcatg ctcatcgtcg gcatcctcta cgccatcttc ctgccgatct acgacgtgat
      601 cggcaagatc aagttctagc gtgcgccact tcccctacct cacgaacacg cgcatggtga
      661 gcctcgtctc gcagcgccgg cgcatcgtgg cgcgccgcga gttcgccgtc tccggcgcgg
      721 gcgcgcaggc cttcgagcac tacctcgcca acctgaagga cgtgccgacg cagctgttca
      781 ccgacctcgc cgaggaggac ttccgcctcg acaccatccc gcacgtgggc gcgcgcgacc
      841 gcgacgcgat cctgcagagg aagctcaccc agatcttccg caacacgccg taccgccacg
      901 cgctgctgca ggggcgcgag cccgaggggc gccgcgacga ccgcgtcttc tacaccgcca
      961 tcaccaaccc ggagctgctg cgcgtctggc tggagatgct ggagcggctg cgcgtgccgc
     1021 tcgaaggcat ccactcggcg gcgatgttca gcggcgtgct gctggaggag ctcgacctcg
     1081 tcttcgcgca cacgctgctc gtcaccttca cgcccggcga cgcgatgcgc cagtcgtact
     1141 tccgcgaccg cgagatcaag ttcagccgca tcacgcccat cgacctggag gaaggccaga
     1201 gcctcggcac catgatcgcc gaggagacga cgcgcacctg gcagtacctg gacagcctgc
     1261 gcaacttcgc gcccgaggac cgcctcgagg tgtgcatcct ggtccacccg aacgaccggc
     1321 gcgtggtcga gccggagctg cgcaacttcg cgcagctcca gtaccacgtg ctcgacatcg
     1381 agcaggtggc gcagaagctg ggcctcaagc ccgccccgct cgactccacc gccgaggagg
     1441 tgatggtcca cctcttcctg ctgcgccgcg ccgagaacca cttcgccggc gaggagctgc
     1501 gccgccacgc gaccctgcgc cgcgcgcgca tcgcgctcac gcaggtgtcg ctcgcgctgg
     1561 tggcggcgag catcgcgtgg gcgggatgga acctcgcccc cgccctgaag gcgaccgagg
     1621 cggacctgcg cgtgacccag caggtggcgg cgctcgaccg cgagaacaac gagatcctca
     1681 agtcgctgcc gtccttcggc gtcggcggct cgaccatgcg cgacgcggtg tcgttctaca
     1741 acggcgccat ccgcggcttc ccgacgctcg ccggcttcgt ggtgccgctg tccggcgtgc
     1801 tgcgcgagca cccggcggtg cgcgtgaccc agctcgcctg gctcgccacc gacgacgcca
     1861 aggcgacgcc caggctcgcg cgcacgctgc cgcgcgaggc cccgccggtg cgcagcaccg
     1921 ccaaggcgcc cgaggcgccg gtcgcggccg ttcccgacga cgcgcccaac ccgccgttcg
     1981 ccggcgggcg ctacgaggtg gccctgatcg aggggtcgct gcgcgtgccc gccaacgatt
     2041 tccgcggcgc cctcgcggag gtggagaagc tcgccgccga catcgcgcgc gtggagggct
     2101 tccacgccga cgtggtcgag ggcccgctcg acgtgagccc gacgcagcag atccaggggc
     2161 gcctcaccga gcgcggcgcc gcgaccatgg agacgcgctt cgtgctgcgc gtggtgcgcg
     2221 agaggcaggc gccggcatga gccaggtctt cagcaagggg gggctcaccg tgctgcgcgt
     2281 gccgctcgcg gtgctggcga tcgcgatcgc ggcgggcgcg gcgatcgtcg tcgcgtcgct
     2341 ctggt
//
LOCUS       DASSYW010000118         2314 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1489442, whole genome shotgun sequence.
ACCESSION   DASSYW010000118 DASSYW010000000
VERSION     DASSYW010000118.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2314)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2314)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2314
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1489442"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..669)
                     /locus_tag="VFN38_01860"
     CDS             complement(<1..669)
                     /locus_tag="VFN38_01860"
                     /inference="COORDINATES: protein motif:HMM:NF013132.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HET9010525.1"
                     /translation="MAGRRVHAAHLVAWAFAVAAVVVALAPAPAGLSVAGQRVLAVVV
                     LAIGLWATDAMAPGVTGLLVIAALALSGGAPSLAAALSGFSEPIAYFLVGVLTLGLAV
                     SRSGLADRLARWSLARSGGRPRRLYVQMLVSFPLLTLILPSATTRTAILVHVYEQALT
                     LSAVARGAPLSKAIMLALNSVNRLASTVILTGGITPAVSAGLIGGLSWSRWFVLMSVP
                     YAALL"
     gene            complement(681..1397)
                     /locus_tag="VFN38_01865"
     CDS             complement(681..1397)
                     /locus_tag="VFN38_01865"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HET9010526.1"
                     /translation="MAASLLSVEEIHTYYGEAHILQGVSIRVAEGEVVTLIGRNGAGK
                     TTTLRSIMGIARPRLGRIALAGEDVTRLPTHDIVRRGIAWVPEERRVLPNLTVLENLR
                     LGLLGVRGADGAAERLDEAFSLFPRLRERIAHRGRQLSGGEQQMVAIARGLVARPRVM
                     LVDEPTEGLAPLLVQGLTEILRRINAGGTTVLLVEQTLEVAMSLSHRLYVMDQGRIQF
                     EGTPASLAADPTIQQRFLGV"
     gene            complement(1417..2169)
                     /locus_tag="VFN38_01870"
     CDS             complement(1417..2169)
                     /locus_tag="VFN38_01870"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HET9010527.1"
                     /translation="MQNETAIEIVGLDKWFGSFHVLRGVDLKVMRGERVVICGPSGSG
                     KSTLLRCINRIEDWQRGRVIVDGMELTEDLKKIDEVRREVGMVFQQFNLFPHLTVLEN
                     VRVAVQGPARAFDFWSRADRLDGVRDRARALLAAVGLADKAALLAAHLSHGEKRHLEI
                     GIALASDPALLLLDEPTAGMSPEETDETMLLIRELAAGRTVILVEHKMKLVMRISDRI
                     TVLHQGQVLAEGTPEEIRANEIVQQTYLGASR"
BASE COUNT          350 a          854 c          809 g          301 t
ORIGIN      
        1 gagcagcgcc gcgtagggga cgctcatcag cacgaaccac cgcgaccacg acagcccccc
       61 gatgagcccg gccgacaccg ccggcgtgat cccgccggtc aggatcaccg tcgaggcgag
      121 ccggttgacc gagttcagcg cgagcatgat cgccttggac aggggcgcgc cgcgggcgac
      181 cgcgctcagg gtcagcgcct gctcgtacac gtgcacgagg atcgcggtgc gggtagtggc
      241 cgacggcagg atcagggtca gcagcgggaa cgacacgagc atctgcacgt agagccgccg
      301 cggccggccg cccgatcgcg cgagcgacca gcgcgcgagc cggtcggcga ggccgctgcg
      361 cgacaccgcc agcccgagcg tgagcacccc gacgaggaag tacgcgatgg gctcggagaa
      421 tcccgagagc gcggcggcca ggctcggggc gccgcccgac agcgccagcg cggcgatcac
      481 gagcaggccc gtcaccccgg gcgccatcgc gtcggtcgcc cagagcccga tcgccagcac
      541 gacgacggcg aggacgcgct gtcccgcgac ggagagcccg gccggcgcgg gcgcgagcgc
      601 aacgaccacg gccgccaccg cgaacgccca cgcgacgagg tgcgcggcgt ggacgcggcg
      661 cccggccacc gccgcgcccg tcagacgccc aggaaccgct gctggatggt cgggtccgcg
      721 gcgagcgacg ccggcgtgcc ctcgaactgg atgcgcccct ggtccatcac gtagaggcga
      781 tgcgacaggc tcatcgcgac ctcgagcgtc tgctcgacga gcagcaccgt ggtcccgccg
      841 gcgttgatgc gcctgaggat ctcggtcagg ccctgcacca gcagcggcgc gaggccctcg
      901 gtgggctcgt ccaccagcat cacgcgcggc cgcgcgacca ggccgcgcgc gatcgccacc
      961 atctgctgct cgccccccga cagctggcgg ccgcggtgcg cgatgcgctc ccggagccgc
     1021 gggaacaggc tgaaggcctc gtcgagccgc tcggcggcgc cgtccgcgcc ccgcacgccc
     1081 agcagcccga ggcggaggtt ctcgaggacg gtcaggttgg gcaggacgcg gcgctcctcg
     1141 ggcacccacg cgatgccgcg acggacgatg tcgtgcgtcg gcagccgcgt gacgtcctcg
     1201 ccggccagcg cgatccggcc gaggcggggc cgcgcgatcc ccatgatcga gcgcagcgtg
     1261 gtcgtcttgc ccgcgccgtt gcgcccgatg agggtcacca cctccccctc ggcgacccgg
     1321 atcgacacgc cctggaggat gtgcgcctcg ccgtagtagg tgtggatctc ctcgacggac
     1381 agaagggagg cggccatcag gcccgcggcc gggccgtcac cgactggcgc ccaggtacgt
     1441 ctgctggacg atctcgttgg cgcggatctc ctcgggcgtg ccctcggcga gcacctgtcc
     1501 ctggtgcagc acggtgatcc ggtccgagat ccgcatgacc agcttcatct tgtgctccac
     1561 gaggatcacg gtccggccgg cggccagctc gcggatcagc agcatcgtct cgtccgtctc
     1621 ctcggggctc atgcccgcgg tcggctcgtc cagcagcagc agcgcggggt cggacgccag
     1681 cgcgatgccg atctccaggt gccgcttctc gccgtgcgag aggtgcgcgg cgagcagcgc
     1741 ggccttgtcg gccagcccca ccgcggcgag gagagcgcgg gccctgtccc gcacgccgtc
     1801 caggcgatcg gcccgcgacc agaagtcgaa ggcgcgcgcc gggccctgga cagccacccg
     1861 gacgttctcg agcacggtca gatggggaaa caggttgaac tgctgaaaca ccatgccgac
     1921 ttcgcggcgg acctcgtcga tcttcttgag gtcctcggtc agttccatgc cgtcgacgat
     1981 gacccggccg cgctgccagt cctcgatgcg gttgatgcat cgaagcagag tcgacttgcc
     2041 gctgcctgaa gggccgcaga tgacgacgcg ctcccctcgc atgaccttca ggtcgacgcc
     2101 gcgcagcacg tgaaaactgc caaaccactt gtccaggccg acgatctcga tcgcggtctc
     2161 gttctgcatc gtgcgcatat cgagcgcgat aggtccggcc gatccggccg cgctcgtact
     2221 ttcgcctcgg tcgcccaagc tctccatcct gtctcagcgc ggccgcgcag tgttcagacg
     2281 tcgctccatg gatagcgcgt agcgcgacat tccg
//
LOCUS       DASSYW010000119         4345 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1508190, whole genome shotgun sequence.
ACCESSION   DASSYW010000119 DASSYW010000000
VERSION     DASSYW010000119.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4345)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4345)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4345
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1508190"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..494
                     /locus_tag="VFN38_01875"
     CDS             <1..494
                     /locus_tag="VFN38_01875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010528.1"
                     /translation="LAGALGAAALYAIVFQRPGGWTILAGWLLHWPADFFTAHKGLLS
                     PTNRIGLDLYNLPLADCVLESLVVLGCCVLYARTFAHSRTQRRWVAAMAAALIVLQVL
                     LDIGTAHEHPVWRPSLARREWRPHLDAFSSAAAASSLRMPLALPSPTPTVSERWQSMV
                     SEA"
     gene            491..724
                     /locus_tag="VFN38_01880"
     CDS             491..724
                     /locus_tag="VFN38_01880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010529.1"
                     /translation="MTTLVCLTCGKEKFFTQEVPASVACDQCGSTVFRSFDTPTEPDE
                     AVIDALEAQARSMSYGDASPDTMPGDLRDLDAR"
     gene            788..1450
                     /locus_tag="VFN38_01885"
     CDS             788..1450
                     /locus_tag="VFN38_01885"
                     /inference="COORDINATES: protein motif:HMM:NF014373.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MgtC/SapB family protein"
                     /protein_id="HET9010530.1"
                     /translation="MEIARVLRVDLLIKLALAVLLGGIIGFEREIAGKPAGLRTNILI
                     CIGAALLMDVSTRVGLIDGHRIGDPGRIAAQIVSGVGFLGAGTIMQSQGMVTGLTSAA
                     TIRVVAAIGMTVGGGYYIEGIGAGLLVTFVLAGLGGLEHWVRRARRVVSATVRTRAGT
                     SEEMVATTLRAHGIRIEGRHVFDHEQDRTFELKLSGPSRQFDLATAALLARDDVYGVH
                     LD"
     gene            1443..2483
                     /locus_tag="VFN38_01890"
     CDS             1443..2483
                     /locus_tag="VFN38_01890"
                     /inference="COORDINATES: protein motif:HMM:NF014841.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase"
                     /protein_id="HET9010531.1"
                     /translation="MIERRTLLVDLAATSRNWALPPEGEARLEREAPPGWEVTFVRAP
                     TSSDGDGPAGGSDEAIRLIPDAEVYFGFGFTADLLAAARRLRWLHSAAAGVGNVLGTG
                     IAARDILITNSAGIHGPPIAEFVVAGVLHFLRGLDVAIAQQRRGEWNKAFFVAEDSPL
                     RELADCRVLIVGAGGLGGETARRLSALGARCTGIRRRPELGPPEGFAAVAGTDQLEGE
                     LARADILVLAAPLTADTTELMTRARLELLPRGAIVVNVSRGALLDEGAVAELLASGRL
                     RGAVLDVFHREPLDASSPLWRLPNALVVPHVSPVSPGRFWPRQLDLFLDNWRRYVHGE
                     PLRNLVDTQAGY"
     gene            2487..3683
                     /locus_tag="VFN38_01895"
     CDS             2487..3683
                     /locus_tag="VFN38_01895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043107 - type IV pilus-dependent motility
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HET9010532.1"
                     /translation="MERIIKAAVERGASDLHIKAGDVFRARINGKLVPLTKQALTPEQ
                     TRTIALHLMANEDDKARIDSLTDYDCSWSASGIGRFRVNIMKQRSSFMVVMRVIPFKV
                     PTFETLKLPATLARVAAAERGMVLVTGVTGSGKSSTMAAMVNYINAHENRHILTLENP
                     IEFLHTDIQSSITQREIGSDTIDFKMGLRAALRQDPDVVMIGEMRDAETIDTAIKAAE
                     TGHLLISTLHTPDAQSTIMRIMAMFPPEEQEVVRIRLSETLHAVVSQRLLPRADGNGR
                     AVAAEILIVTPAVRDMIADGRRIGEIRDYIADGRDQYGMQTFDQHLADLVQEGLVTFE
                     TAMAAATNPSDFELKMRMFSRRSATESAGSPVAAAAAAPQPAEQPAASGLDVTQGAGA
                     FDFLNQ"
     gene            3680..4222
                     /locus_tag="VFN38_01900"
     CDS             3680..4222
                     /locus_tag="VFN38_01900"
                     /EC_number="4.1.3.3"
                     /EC_number="4.2.1.41"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: protein motif:HMM:NF012904.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009436 - glyoxylate catabolic process
                     [Evidence IEA];
                     GO_process: GO:0071704 - organic substance metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HET9010533.1"
                     /translation="MIALDGILAPLVTPFDRAGELDEESFVANVRAHLAAGLHGVVVA
                     GSTGEAALLDDAERARLVELARAAVPRDRTLLVGTGAESTRAVVARTRAAAERGADGV
                     LVVAPHYYGAAVTSDALRDHYLRVADASPVPVLLYTIPKYMHFAIPAEVVGVLARHEN
                     IVGMKDSSGHAALLRGYLPA"
BASE COUNT          607 a         1519 c         1581 g          638 t
ORIGIN      
        1 tgctggccgg cgccctcggc gcggcggcgc tgtatgccat cgtcttccag cggccgggcg
       61 gctggacgat cctcgccggc tggctccttc actggcccgc cgatttcttc acggcgcaca
      121 agggccttct gagtccgacg aaccgcatcg gtctcgatct ctacaatctg ccgctcgccg
      181 attgcgtcct cgagtcgttg gtcgtccttg ggtgttgcgt gctctatgcg cggacgttcg
      241 cgcacagcag gacgcagcga cgctgggtcg cggcgatggc cgccgcgctc atcgtgctgc
      301 aggtgctgct ggacatcggg acggcgcacg agcatccggt ctggcgaccc tcgctggcgc
      361 ggcgcgaatg gcggcctcat cttgatgcct tctcgtccgc ggcggcggcg tcatcgctcc
      421 gcatgcctct tgcactcccc tcgcccaccc ctacagtgag cgagcgatgg caaagcatgg
      481 tgtccgaggc gtgaccacgc tggtctgcct cacctgcggc aaggaaaagt tcttcactca
      541 ggaagtgccg gcgtcggtcg cgtgcgatca gtgcggcagc acggtcttcc ggagcttcga
      601 tacccctacc gagcccgacg aagcggtcat cgacgcgctc gaggcccagg cccgcagcat
      661 gtcctacggc gatgcgtcgc ccgacaccat gcccggagat ctgcgcgacc tcgacgcccg
      721 gtgacgtgac ggcgggcggg agcccgccat tttcgtcccc gcacaagagg tcgatgttcc
      781 cctgttgatg gagatcgcgc gcgtcctgcg cgtcgatctc ctcatcaagc tcgccctggc
      841 cgtgctgctc ggcggcatca tcgggttcga gcgcgagatc gcgggcaagc ccgccggcct
      901 gcgcacgaac atcctcatct gcatcggcgc cgcgctgctg atggacgtct ccacgcgcgt
      961 cggcctgatc gacggccatc gcatcggcga tccggggcgc atcgccgccc agatcgtctc
     1021 gggggtcggc ttcctcggcg ccggcacgat catgcagtcg caggggatgg tcaccgggct
     1081 cacctccgcg gcgaccatca gggtcgtggc cgccatcggg atgacggtgg gcggcggcta
     1141 ctacatcgag gggatcggcg cggggctgct cgtcaccttc gtgctggcgg gcctcggcgg
     1201 actcgaacac tgggtgcgcc gcgcccgccg cgtcgtgagc gccacggtgc gcacgcgcgc
     1261 cggcacgtcg gaggagatgg tcgccaccac gctccgcgcg cacggcatcc gcatcgaggg
     1321 gcgccacgtg ttcgaccacg agcaggaccg caccttcgag ctcaagctgt cgggaccgtc
     1381 gcgccagttc gacctcgcca ccgccgcgct gctggccagg gacgacgtgt acggagtcca
     1441 tcttgattga gcggcgcacg ctgctggtgg acctggcggc gacgtcgcgc aactgggcac
     1501 tgccgccgga gggagaggcg cggctggaac gggaggcgcc gccgggctgg gaggtgacgt
     1561 tcgtgcgggc tcccacgagc tccgatggcg acggaccggc cggcgggagc gacgaggcca
     1621 tccgcctcat ccccgacgcc gaggtctact tcggcttcgg cttcaccgcc gacctgctgg
     1681 cggcggcgcg gcggctgcgc tggctccaca gcgcggcggc cggagtgggg aacgtgctcg
     1741 gcacggggat cgccgccagg gacatcctga tcaccaactc ggcggggatc cacggcccgc
     1801 cgatcgcgga gttcgtcgtc gccggggtgc tgcacttcct ccgggggctg gacgtcgcga
     1861 tcgcccagca gcggcgcggc gagtggaaca aggccttctt cgtggccgag gactcgccgc
     1921 tgcgggagct ggccgactgc cgggtgctga tcgtgggcgc cgggggactc ggcggcgaga
     1981 cggcgcggcg gctctcggcc ctgggggcgc ggtgcacggg gatccgccgc cgcccggagc
     2041 tgggcccccc cgagggattc gcggcggtgg cgggcacgga ccagctggag ggggagctcg
     2101 cccgggccga catcctggtg ctggccgcgc cgctgacggc cgatactacg gagctgatga
     2161 cgcgtgcgcg gctggagctg ctgccgcgcg gcgccatcgt ggtgaacgtg tcccggggcg
     2221 cgctgctgga cgagggggcc gtggccgagc tgctcgcgtc gggccggttg cgcggcgcgg
     2281 ttctcgacgt cttccacagg gagccgctcg acgcgtccag cccgttgtgg cgcctcccga
     2341 acgctctggt ggtgccacac gtatcgccag tgtccccggg gcgcttctgg ccccggcagc
     2401 tcgatctctt tctcgacaac tggcgccgct acgtgcacgg cgagccgttg cgcaacctcg
     2461 tcgacacgca ggcagggtac tgaccgatgg agcgaatcat caaggcggcg gtggagcggg
     2521 gcgcgtccga cctgcacatc aaggcgggcg acgtgttccg cgcgcggatc aacgggaagc
     2581 tggtgccgct cacgaagcag gccctgaccc cggagcagac gcgcaccatc gcgctgcacc
     2641 tgatggccaa cgaggacgac aaggcgcgga tcgacagcct caccgactac gactgctcgt
     2701 ggtcggcgag cgggatcgga cgcttccgcg tgaacatcat gaagcagcgc tccagcttca
     2761 tggtggtgat gcgcgtgatc ccgttcaagg tgccgacgtt cgagacgctg aagctgccgg
     2821 cgacgctcgc ccgcgtggcg gcggcggagc gcgggatggt gctggtcacc ggcgtcaccg
     2881 gctccggcaa gtcgagcacg atggcggcga tggtgaacta catcaacgcg cacgagaacc
     2941 gccacatcct gacgctcgag aacccgatcg agttcctgca caccgacatc cagagctcca
     3001 tcacgcagcg cgagatcggc tcggacacga tcgacttcaa gatggggctc cgcgccgcgc
     3061 tgcggcagga tcccgacgtc gtgatgatcg gcgagatgcg cgacgccgag acgatcgaca
     3121 cggcgatcaa ggcggcggag acgggacacc tcctgatctc cacgctgcac acgcccgatg
     3181 cgcagagcac gatcatgcgc atcatggcga tgttcccgcc ggaggagcag gaggtggtgc
     3241 gcatccgcct cagcgagacg ctgcacgccg tggtgtcgca gcggctcctg ccgcgcgccg
     3301 acggcaacgg gcgcgcggtg gcggccgaga tcctcatcgt caccccggcg gtgcgcgaca
     3361 tgatcgccga cgggaggcgc atcggcgaga tccgcgacta catcgccgac ggccgcgacc
     3421 agtacggcat gcagacgttc gaccagcacc tggccgacct ggtgcaggaa gggctcgtca
     3481 ccttcgagac ggcgatggcc gcggcgacga acccctcgga cttcgagctc aagatgcgga
     3541 tgttcagccg ccgctcggcc acggaatcgg cgggctcgcc cgtcgccgcg gcggcggccg
     3601 cgccgcagcc ggccgaacaa cccgccgcgt ccgggctgga cgtcacccag ggcgccggcg
     3661 cgttcgactt cctgaaccag tgatcgcgct cgacggcatc ctcgcgccgc tcgtcacccc
     3721 gttcgaccgg gcgggggagc tggacgagga gtcgttcgtc gcgaacgtgc gggcgcacct
     3781 ggcggccggg ctgcacggcg tggtggtggc cggctccacc ggcgaggccg cactgctgga
     3841 cgatgccgag cgcgcgcggc tggtggagct cgcgcgcgcc gcggtgccgc gggatcgcac
     3901 gctgctggtg ggcacgggcg cggagtccac gcgggccgtg gtcgcgcgca cccgcgccgc
     3961 ggcggagcgg ggcgccgacg gcgtcctcgt ggtggcaccg cactactacg gggcggcggt
     4021 gacctccgac gcgctgcgag accactacct ccgcgtcgcc gacgcgagcc cggtgccggt
     4081 gctgctgtac acgatcccca agtacatgca cttcgccatc cccgccgagg tggtgggggt
     4141 gctggcgcgg cacgagaaca tcgtggggat gaaggacagc tccggccacg ccgccctgct
     4201 gcgcggctac ctgcccgcgt agggcgcgac gttcaaggtg gtcaccggga gcgcgacgct
     4261 gctgggcgag gcgctgcagc tcggcccgca cggcgcgatc ctcgccgcgg cgctgttcgc
     4321 gccggcgctg gcgctcgacg tgctg
//
LOCUS       DASSYW010000120         2379 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1728602, whole genome shotgun sequence.
ACCESSION   DASSYW010000120 DASSYW010000000
VERSION     DASSYW010000120.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2379)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2379)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2379
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1728602"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1743
                     /locus_tag="VFN38_01905"
     CDS             <1..1743
                     /locus_tag="VFN38_01905"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: protein motif:HMM:NF012789.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent helicase"
                     /protein_id="HET9010534.1"
                     /translation="GPSAGLPADFSIMDQADAEDLMQLARGALGLAKTNKRFPKKETL
                     HWLYSRHINTELPLDELLHRDTPHFLEYEAQITALFADYTLRKQERNLVDYDDLLLFW
                     AMMLEASTELQSRIAGLYEHVLVDEYQDTNLLQARILRGMCSGHRRLTVVGDDAQSIY
                     AFRGAHFRNILDFPRQFPGTTMVTLAQNYRSTAPILALSNIVISRAEERFTKELYTSR
                     EGGEQPWLVTAKDEAQQTRFVVDRVLQLHESGVALREMAVLFRAGYMSADLEIELANR
                     KIPFEKWGGLKFLEAAHVKDVLAFLRVSENPRDEVSWYRILMLMPGIGDTTARALMAA
                     MQERAWDPDAFTHLVPPPRARDAHRSLSVLLRQLRGVANRDGDAGGVKVASDIAAIRA
                     IYDAVLKEKYDRPEARLADLDQLRTIAAGYPSRTAFLAALALDPPSNTQDLAGGSESE
                     TDALVLSTVHSAKGKEWKAVFVIWAVDGWFPSSRAVEDPDELEEERRLMYVALTRAKD
                     ELAVVYPMQVYGSRRGAEYSFDQLSRFLDRGVRATMQRVVVEEPGDLPAAAPLTAPVV
                     DLRALMRGRFGGAK"
     gene            complement(1777..>2379)
                     /locus_tag="VFN38_01910"
     CDS             complement(1777..>2379)
                     /locus_tag="VFN38_01910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010535.1"
                     /translation="LAGFQDEMGCGTRVNAFVRCIAARLPMLVSSRVIEFDSTGRTVR
                     EWPMTDAPRVGDAIAGVSGEELVTRYEPAPDGVYLRLRPSGEFRISAERLDPLSSQLW
                     VRLDDSGWVRVRPNDNMGLGPGLAAARPGRWIPKGDSGWYVRVDSGPHLGDSGRAQAL
                     PFAPTPENVACPAASTYDGMHCMAFPDAGRRRTIAVPIPC"
BASE COUNT          369 a          870 c          810 g          330 t
ORIGIN      
        1 ggtccttccg ctgggctgcc ggccgacttc agcatcatgg accaggcgga tgccgaagac
       61 ctgatgcagc tcgcccgggg cgccctcggc ctcgcgaaga ccaacaagcg cttcccgaag
      121 aaggagacgc tgcactggct ctactcgcgg cacatcaaca ccgagctccc gctggacgag
      181 ctgctgcacc gcgacacgcc gcattttctc gagtacgagg cgcagatcac cgccctcttc
      241 gccgactaca cgctgcgcaa gcaggagcgc aacctcgtcg actacgacga cctgctcctg
      301 ttctgggcga tgatgctcga ggcgtcgacc gagctccagt cgcgcatcgc cggcctctac
      361 gagcacgtgc tggtggacga gtaccaggac accaacctgc tgcaggcccg catccttcgc
      421 ggcatgtgca gcgggcaccg gcggctcacc gtcgtcggcg acgacgccca gagcatctac
      481 gccttccgcg gcgcgcactt ccgcaacatc ctcgacttcc cgcggcagtt tcccgggacg
      541 acgatggtga cgctggcgca gaactaccgc agcaccgcgc cgatcctcgc gctctcgaac
      601 atcgtcatct cgcgcgcgga agagcgattc accaaggagc tgtacaccag tcgcgaagga
      661 ggcgagcagc cctggctggt gacggcgaag gacgaagccc agcagacgcg cttcgtcgtc
      721 gaccgcgtgc tccagctgca cgaatccggg gtggcgctcc gcgagatggc cgtcctcttc
      781 cgcgcgggct acatgtcggc cgacctcgag atcgagctgg ccaaccggaa gatcccgttc
      841 gagaagtggg gcgggctcaa gtttctcgag gcggcccacg tgaaggacgt cctcgccttc
      901 ctgcgcgtct cggagaaccc gcgcgacgag gtgagctggt accgcatcct gatgctcatg
      961 cccggcatcg gcgacaccac cgcgcgcgcg ctcatggcgg cgatgcagga gcgcgcgtgg
     1021 gatcccgatg cgttcacgca tctcgtgccc ccgccccggg ccagggacgc gcaccggtcg
     1081 ctgtcggtgc tcctgcgcca gctccgcggc gtcgccaacc gtgatggcga cgcgggcggg
     1141 gtgaaggtgg cgagcgacat cgcggcgatc cgcgccatct acgacgccgt gctgaaggag
     1201 aagtacgacc ggcccgaggc gcgcctggcc gacctcgacc agcttcgcac gatcgccgcc
     1261 ggctatcctt cgcgcaccgc cttcctggcc gccctggccc tcgatcctcc ctccaacacc
     1321 caggacctcg ccggggggtc cgagtccgag accgacgcgc tcgtgctcag cacggtccac
     1381 agcgccaagg ggaaggagtg gaaggcggtc ttcgtgatct gggcggtgga cggctggttc
     1441 ccctcgtccc gcgccgtgga ggatcccgac gagctggagg aggagcgccg cctgatgtac
     1501 gtcgcgctga cgcgcgcgaa ggacgagctc gcggtcgtct acccgatgca ggtctacggc
     1561 tcgcggcgcg gtgccgagta cagcttcgac cagctctcgc gcttcctcga ccgaggcgtg
     1621 cgcgccacga tgcagcgagt cgtggtggag gagccgggcg acctgccggc ggccgcgccc
     1681 ctcaccgcgc cagtggtgga tctccgggcg ctcatgcggg ggcggttcgg cggggcgaag
     1741 tagggctccc gccgtgccgg catcggcggc ggcccgctag caggggatcg ggaccgcgat
     1801 ggtccgcctc cgcccggcgt cgggaaacgc catgcagtgc atcccgtcgt acgtggacgc
     1861 ggccggacac gccacgttct ccggcgtcgg ggcgaacggc agcgcctgcg cgcgccccga
     1921 gtcccccaga tgcgggccgg agtcgacgcg cacgtaccag cccgagtcgc ccttcgggat
     1981 ccaccggccc ggccgggcgg cggcgagccc cggccccagg cccatgttgt cgttcggccg
     2041 cacgcgcacc caccccgagt cgtccagccg cacccacagc tgcgacgaca gcggatcgag
     2101 acgctcggcg gagatccgga actcgccgga ggggcgcagg cggaggtaga ccccgtcggg
     2161 agcgggctcg tacctcgtca cgagctcctc gccggagacg ccggcgatcg cgtcgcccac
     2221 gcgcggcgcg tcggtcatcg gccactcgcg gacggtgcgc ccggtggagt cgaactcgat
     2281 caccctcgac gagaccagca tgggcagccg cgcggcgatg catcgcacga acgcgttgac
     2341 gcgagtgccg caccccatct cgtcctggaa cccggccag
//
LOCUS       DASSYW010000121         2607 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_770860, whole genome shotgun sequence.
ACCESSION   DASSYW010000121 DASSYW010000000
VERSION     DASSYW010000121.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2607)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2607)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2607
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_770860"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1015
                     /locus_tag="VFN38_01915"
     CDS             <1..1015
                     /locus_tag="VFN38_01915"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HET9010536.1"
                     /translation="ALEADDQLMTAVLESLEEGVLAIDERGMVVRVNQRARLLLDASA
                     PLPFPRELLPRDPALRSAIEHAMAGRSMPPEEVLLHGRTVAVASRPLGDRGAVVTVLD
                     LPVLRKLETIRRDFVANVSHELKTPLTAVSGYAETLLDEDIPPEQRRRFMETIRDNAW
                     RMQRIVDDLLDLSRIESGGWRPNIGTVAVEGIVRDVFAAVKATADAKGLRLVSEIPPD
                     AGVVHADPTAFRQIVSNLVENAVRYTQDGSVTLRTRPGDAGIWLDVRDTGVGIAPEHV
                     PRIFERFYRVDAGRSREQGGTGLGLAIVRHLVDAHGGRVEAASTVGRGTTISVLFPSA
                     PAA"
     gene            complement(1038..1355)
                     /locus_tag="VFN38_01920"
     CDS             complement(1038..1355)
                     /locus_tag="VFN38_01920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010537.1"
                     /translation="MSPDPELPLYASRPLTPRQDRIERTIERVLRAGGTRSELRDAVY
                     QFADHVRMQQVPPERALMQLKAVAMRAFPVREQVPDAVGESMADRLVMMVRWCTARYY
                     RVD"
     gene            complement(1530..2564)
                     /gene="pstS"
                     /locus_tag="VFN38_01925"
     CDS             complement(1530..2564)
                     /gene="pstS"
                     /locus_tag="VFN38_01925"
                     /inference="COORDINATES: protein motif:HMM:NF008171.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009897 - external side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0042301 - phosphate ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein PstS"
                     /protein_id="HET9010538.1"
                     /translation="MKLLSRLVVTSSMLVAAVTPAIAQDLTGAGATFPYPIYSKWFSD
                     YAAKTGVKINYQSIGSGGGIRQLSEQTVDFGASDAPMSDAELAKAKGGAIMHIPTVLG
                     AVVVTYNVPELPRPLRLDGATLADVFLGRITKWNDARIAALNPGAKLPASDILVVHRS
                     DGSGTSYVFTDYLSSVSANWAAKVGKGKEVQWPVGLGGKGNEGVAGQVKQLPGSIGYV
                     ELAYAKQNRLAYADVRNALGQFVTPTIDAVTAAAAGAAAKLPANTDYRVSIVNASGKH
                     AYPISSFTWLLVYRNQTDAAKGKKLIDFVRWALTDGEKSAAALDYAPLPAAMAKQLIR
                     QIGSVSVAAK"
BASE COUNT          388 a          914 c          914 g          391 t
ORIGIN      
        1 ggcgctggag gccgacgacc agctcatgac cgccgtgctg gagtcgctcg aggagggcgt
       61 gctggcgatc gacgagcgcg gcatggtcgt acgcgtcaat cagcgcgcac gactcctgct
      121 cgacgcgtcg gcgcccctcc ccttcccgcg cgagctcctg ccgcgcgacc ccgccctgcg
      181 ctccgccatc gaacatgcga tggccgggcg gagcatgccg cccgaggagg tcctgctgca
      241 cggccgcacg gtcgccgtcg cgtcgcgccc gctgggcgac cggggtgcgg tggtcacggt
      301 gctcgatctc cccgtgctgc ggaagctcga gacgatccgt cgcgacttcg tggccaacgt
      361 gagccacgag ctcaagacgc cgctcaccgc cgtcagcggc tacgccgaga cgctgctcga
      421 cgaggacatc ccgccggagc agcggcggcg cttcatggag acgatccgcg acaacgcgtg
      481 gcggatgcag cgcatcgtgg acgacctgct cgacctttcg cgcatcgaga gcggcggctg
      541 gcgcccgaac atcggcaccg tcgccgtcga gggcatcgtg cgcgacgtct tcgccgccgt
      601 gaaggcgacg gccgacgcca aggggctgcg cctcgtgtcg gagatcccgc cggacgccgg
      661 cgtggtgcac gccgatccca cggcgttccg ccagatcgtg agcaacctgg tggagaatgc
      721 cgtgcgctac acgcaggacg ggagcgtcac gctgcgcact cgtcccggcg atgcgggcat
      781 ctggctggac gtgcgcgaca cgggcgtcgg catcgcgccc gagcacgtgc cgcgcatctt
      841 cgagcgcttc tatcgcgtgg atgccggccg gtcgcgcgag cagggtggca ccgggctcgg
      901 cctcgcgatc gtgcgccacc tcgtggacgc gcacggtggg cgggtggaag cggcgagcac
      961 cgtggggcgg ggcacgacga tcagcgtgct cttcccgtcc gcgcccgccg cctaggtcga
     1021 cgcgcgcgcg ggctcgttca gtcgacccgg tagtaccggg ccgtgcacca ccgcaccatc
     1081 atcacgagcc ggtcggccat cgactcgccg acggcgtccg gcacctgctc gcggacgggg
     1141 aacgcgcgca tcgcgaccgc cttcagctgc atgagcgcgc gctccggcgg cacctgctgc
     1201 atgcggacgt ggtcggcgaa ctggtacacc gcatcgcgca gctcgctgcg ggtgccaccg
     1261 gcgcgcagca cgcgctcgat cgtgcgttcg atgcggtcct gccgcggcgt cagcggacga
     1321 ctcgcgtaga gcggcagctc gggatcgggc gacatggcat gtctcgacgg caggcgacgg
     1381 cgtacgatgg gagccccgaa ggagccgggc aaggtcgtac gactcgcccg cccatcacga
     1441 tcgtgtaacg attggatgtc gttacggact gatgcacgac gggcagcgcg cgtgcggcgc
     1501 gctgcccgtc gctgcaatcc agcgtcaggc tacttcgcgg cgaccgagac cgagccgatc
     1561 tggcggatga gttgcttcgc catcgccgcc ggaagcggcg cgtagtcgag ggcggccgcc
     1621 gacttctcgc cgtccgtcag cgcccagcgc acgaagtcga tcagcttctt ccccttcgcc
     1681 gcgtccgtct ggttgcgata cacgagcagc caggtgaatg acgagatcgg atacgcgtgc
     1741 ttccccgacg cgttgacgat cgacacgcgg tagtccgtgt tggccggcag cttcgcggcc
     1801 gctcccgcgg cggcggcggt gaccgcgtcg atcgtcggcg tcacgaactg tcccagtgcg
     1861 ttccgcacgt cggcgtaggc cagcctgttc tgcttggcat acgcgagctc gacgtagccg
     1921 atggagcccg gcagctgctt cacctgcccc gccacgccct cgttgccctt gccgcccaga
     1981 ccgaccggcc actgcacctc cttccccttg ccgaccttcg ccgcccagtt cgcgctcacg
     2041 ctcgagaggt agtcggtgaa gacgtagctc gtccccgacc cgtcggaacg gtgcacgacc
     2101 aggatgtccg acgcggggag cttcgcgccc gggttcagcg cagcgatgcg cgcgtcgttc
     2161 cacttcgtga tccggcccag gaagacgtcg gcgagcgtgg caccatcgag acgcagggga
     2221 cgcgggagct cgggcacgtt gtacgtcacc accacggcgc cgagcacggt cgggatgtgc
     2281 atgatggccc cgcccttcgc cttcgccagc tccgcgtcgc tcatcggcgc atcggaggcg
     2341 ccgaagtcca cggtctgttc ggagagctgg cggatgccgc cgccggagcc gatcgactgg
     2401 tagttgatct tcaccccggt cttcgcggca tagtccgaga accacttgct gtagatcgga
     2461 taaggaaacg tcgcgcccgc gccggtgaga tcctgagcga tggcaggagt gacggcggcc
     2521 acgagcatgg acgaggtcac gacgagacgg gatagcagct tcacggagac ggctcctgaa
     2581 cgggggaaga cgatgtggag gcacgcc
//
LOCUS       DASSYW010000122         2352 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_88963, whole genome shotgun sequence.
ACCESSION   DASSYW010000122 DASSYW010000000
VERSION     DASSYW010000122.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2352)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2352)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2352
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_88963"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(34..465)
                     /locus_tag="VFN38_01930"
     CDS             complement(34..465)
                     /locus_tag="VFN38_01930"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF025054.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HET9010539.1"
                     /translation="MLTRPPTSTDVAAIKALIDLYVPEGTLLPRSEEFIAAHSHDFIV
                     AVDDGRVVGCVHLDEYAPSLAEIRSLAVDPECQGKGVGVALVAAAERLARVRDYSTVF
                     AVSNNLAFFRARGYAERHIPELDLERSEVSKYKGVYAKDME"
     gene            687..848
                     /locus_tag="VFN38_01935"
     CDS             687..848
                     /locus_tag="VFN38_01935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010540.1"
                     /translation="MRKLFTFVGGTAGSYAGWAIGAPVGTMTAFMVSMVGTGLGIYAG
                     YRLAQRYVD"
     gene            1133..2266
                     /locus_tag="VFN38_01940"
     CDS             1133..2266
                     /locus_tag="VFN38_01940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010541.1"
                     /translation="MRNGAAGGERSRLLRAVVAALTLLAPAIACRSAAPVAYQVEPVP
                     AVVGCAAGARCEDVVEITYLGVAGFLIRHGGTIVLTAPSFTNPPLEEVAPAYFRVFRR
                     AAPRIHPDTLAIERFLPAAADSASLLLVGHGHYDHLLDVPYVATRRAVRATLYGGPSV
                     RHMLMGDSVLRAHPERVVAVDSADAGSATRGGRWFYDADSSVRVMALVADHAPTLRLF
                     RQGQMFAAGVVREDLATLPARAGDWKLGEPYSYLIDFLAPGTRTPRFRVYFQDAPNTP
                     PRGFPPRQLLAEKGVDVALLCVATSRNVAHAPDSLLALLRPRYVVAGHWESFFRQQTL
                     PLALNPASDVDAFMKALSTTLPARSSWVMPLPRTTVRVAVGGR"
BASE COUNT          309 a          865 c          837 g          341 t
ORIGIN      
        1 caggcggcgg atcccccgga tcgctcgtcg ctactattcc atgtccttcg cgtagacgcc
       61 cttgtacttg ctcacctcgc tgcgctcgag gtcgagctcg gggatgtggc gctcggcgta
      121 cccccgcgcg cggaagaacg cgaggttgtt gctcaccgcg aagacggtgc tgtagtcgcg
      181 cacccgggcc aggcgctcgg cggcggcgac gagcgccact cccaccccct tcccctggca
      241 ctccgggtcc acggcgagcg agcggatctc ggcgaggctc ggcgcgtact cgtcgagatg
      301 gacgcagccc acgacccgcc cgtcgtccac ggcaacgatg aagtcgtgcg agtgggcggc
      361 gatgaactcc tcggagcgcg gcaggagcgt gccttcgggg acatagaggt cgatcagcgc
      421 cttgatcgcc gcgacgtcgg tggaggtggg gggtcgggtg agcacgatgg gagagacggg
      481 aagaaaagag acgtttgccg gagacaggga gaatcgccgg gtgacgcccg ccgcgccaga
      541 cttcggggcg agggaagcgg ccccgctaca atcgtcgcgg cgagcgggac gcgccgatcc
      601 tccggcaccc gacgcggaga cgccggcccc cggcgatcgt cagataggga gaggccaccg
      661 cacccccacc cctgtcccgt tccgccatgc gcaagctctt caccttcgtc ggcggcaccg
      721 ccggcagcta cgccggctgg gcgatcggcg cgccggtcgg gacgatgacg gccttcatgg
      781 tgagcatggt cggcacgggg ctggggatct acgcggggta tcgcctcgcg cagcgctacg
      841 tggactgaga cgcgccgggc gctccgtggc ggccagccgc ggcggggcgt agcttctcgt
      901 cgtccttccg tccccccatc gagccggagc atccgcgatg aagaacgccg tgccgtcccc
      961 cgccgagcag agctgctgct gcgacgatcc caagtgcggc tgcagctgcg gctgcgacgc
     1021 gggtccctgc tgcgggaact gcaagagctg cgtctgctgc gacgactgac cggctgacgt
     1081 gatcgccggc cgcgaacagc ctcgcagtcg tcgcggtgcg gcggactcac gaatgaggaa
     1141 tggagcggcg gggggcgagc ggagccggct gctgcgggcc gtcgtcgccg cgctcaccct
     1201 gctggcgccg gcgatcgcct gccggagcgc ggcgcccgtg gcctaccagg tcgagcccgt
     1261 accggccgtg gtcggctgcg cggcgggggc ccgctgcgag gacgtcgtcg agatcaccta
     1321 cctcggcgtc gccggcttcc tgatccgcca cggcgggacg atcgtgctca ccgcgccatc
     1381 gttcaccaac ccgccgctcg aggaggtcgc gccggcctac ttccgcgtct tccgccgcgc
     1441 cgctccgcgg atccaccccg acaccctggc gatcgagcgg ttcctccccg cggccgccga
     1501 ttcggcgtcg ctgctgctcg tcggccacgg gcactacgac catctgctcg acgtgcccta
     1561 cgtcgcgacc cgccgcgccg tgcgcgccac gctctacggc ggtccgagcg tgcgtcacat
     1621 gctgatgggg gactccgtcc ttcgcgccca cccggagcgc gtggtcgccg tggactccgc
     1681 cgacgcgggc agcgcgacgc ggggcggccg ctggttctac gacgcggact cgagcgtgcg
     1741 cgtgatggcg ctcgtcgccg accacgcccc cacgctccgc ctctttcgcc aggggcagat
     1801 gttcgccgcc ggggtcgtcc gtgaggacct cgccaccctg ccggcgcggg cgggggactg
     1861 gaagctcggc gagccctact cgtacctgat cgacttcctg gcgccgggga cgaggacgcc
     1921 ccgcttccgc gtctacttcc aggacgcgcc gaacacgccc ccgcgcggct ttcccccgcg
     1981 ccagctgctc gccgagaagg gggtggacgt cgcgctcctc tgcgtcgcca cgtcgcgcaa
     2041 cgtcgcgcac gcccccgaca gcctgctcgc gctcctccgc ccgcgctacg tcgtggccgg
     2101 ccactgggag tccttcttcc gccagcagac ccttcccctc gccctcaacc cggccagcga
     2161 cgtggacgcc ttcatgaagg cgctgtcgac cacgctaccg gcgcgctcga gctgggtcat
     2221 gcccctgccg cgaacgacgg tgagggtggc ggtcgggggg cgttgagagg gggtgggcgg
     2281 agagtgggaa gggcgtgaga ggtgagatgg ctgtcgcgtg ccatcgcacc tctcccagcc
     2341 tcggccgccc ac
//
LOCUS       DASSYW010000123         2163 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1175888, whole genome shotgun sequence.
ACCESSION   DASSYW010000123 DASSYW010000000
VERSION     DASSYW010000123.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2163)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2163)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2163
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1175888"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..294)
                     /locus_tag="VFN38_01945"
     CDS             complement(<1..294)
                     /locus_tag="VFN38_01945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010542.1"
                     /translation="MAATRPRYCGVLLVAALWLTAGVIGPDGRLAAQKKKRLPPPPPF
                     AALFPLEEAWSITLPARPIAPAAHDGARLLVPLVSKTLVALDWRTGNTAWSVPL"
     gene            331..1881
                     /gene="guaA"
                     /locus_tag="VFN38_01950"
     CDS             331..1881
                     /gene="guaA"
                     /locus_tag="VFN38_01950"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003771338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003922 - GMP synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016462 - pyrophosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006177 - GMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HET9010543.1"
                     /translation="MSHQTIVVLDFGSQYTQLIARRLRELSVYSEVVPFTTPLATLRE
                     KRPMGIILSGGPKSVSDGDAPKCEVALFDVGVPVLGICYGMQLMTDLLGGEVRRSGQR
                     EFGHAHVQVAATAVRPRLFEGVPDSFKVWASHGDDVGGVPGGFSVAATSSTAPIVEME
                     APARALYGLLFHPEVVHTEHGKDILRRFAFDVCGCRGDWTIASFIEEATERIRRQVGP
                     TGKVVCGLSGGVDSTVAAMLMHRAIGDRLTCIFVDNGLLRYDEANQIQKRFREKLKLP
                     LDFVDATDTFLTRLDGITDPEQKRKIIGGTFIDVFEQRATELGGFGFLGQGTLYPDVI
                     ESASVLGPAVVIKSHHNVGGLPERMNFALVEPLRDLFKDEVRRVGVDLGLEKEFVVRQ
                     PFPGPGLAVRIVGAITRERLDLLRLADRIVADEIRKAGWYERVWQSFAVLLPVQSVGV
                     MGDARTYEYTVAVRAVESLDGMTADWARLPHDLLAAISSRIVNEVRGINRVVYDISSK
                     PPSTIEWE"
     gene            1895..>2163
                     /locus_tag="VFN38_01955"
     CDS             1895..>2163
                     /locus_tag="VFN38_01955"
                     /inference="COORDINATES: protein motif:HMM:NF014826.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PHP domain-containing protein"
                     /protein_id="HET9010544.1"
                     /translation="MAQEFVHLHLHTEFSLLDGACRVDELLDEAVKLKMPALAVTEHG
                     NMFSSVVFHDHAKDRGLKPILGCEVYVAAGSRFDKSGPQTETNHLV"
BASE COUNT          353 a          711 c          760 g          339 t
ORIGIN      
        1 gagcgggacc gaccaggcgg tgttgcccgt gcgccaatcg agcgcgacca gggttttcga
       61 aacgaggggc acgaggagcc gcgcgccgtc gtgcgccgcc ggcgcgatcg gccgggccgg
      121 cagtgtgatc gaccacgcct cttcgagcgg gaagagcgcg gcaaacggcg ggggcggcgg
      181 caggcgtttc ttcttctgcg cagcgagacg gccgtccggg ccgatcactc cagccgtgag
      241 ccacagcgcc gcgaccagca gaacgccgca atatcttggg cgtgtggcgg ccacgaccac
      301 atataatagc gattcccgcc ggacgtgacc gtgtcgcatc agaccatcgt cgttctcgat
      361 ttcggctcgc agtacaccca gctcatcgcg cgacgcctgc gagagctgtc ggtctactcc
      421 gaggtcgtcc ctttcaccac gccgcttgcg acgctgcgcg agaagcggcc catgggcatc
      481 atcctgtcgg gcggcccgaa gagcgtctcg gacggcgacg cgccgaagtg cgaggtcgcg
      541 ctcttcgacg tcggcgtgcc ggtgctcggc atctgctacg gcatgcagct gatgacggac
      601 ctcctgggcg gggaagtgcg ccgctcgggg cagcgcgagt tcggccacgc gcacgtgcag
      661 gtggccgcca ccgccgtgcg gccgcgcctg ttcgaaggcg tgcccgacag tttcaaggtg
      721 tgggcgagcc acggcgacga cgtggggggc gtgccgggcg ggttcagcgt ggccgccacg
      781 agcagcacgg cgccgattgt cgagatggaa gcgcccgcgc gggcgctcta cgggctgctg
      841 ttccacccgg aagtggtcca caccgaacac ggcaaggaca tcctccgccg cttcgccttc
      901 gacgtgtgcg gctgccgcgg cgactggacg atcgcctcgt tcatcgagga ggccaccgaa
      961 cggatccgga gacaggtggg ccccacgggc aaagtcgtct gcgggctctc gggcggcgtg
     1021 gactccaccg tggccgccat gctgatgcac cgcgcgatcg gcgaccgcct gacctgcatc
     1081 ttcgtggaca acgggctgct gcgctacgac gaggcgaacc agattcagaa gcgcttccgc
     1141 gagaagctga agctgccgct cgacttcgtg gacgccaccg acacgttcct gacgcggctc
     1201 gacggcatca ccgaccccga gcagaagcgg aagatcatcg gcggcacgtt catcgacgtg
     1261 ttcgagcagc gcgccaccga gctgggcggc ttcggcttcc tgggtcaggg gaccctgtat
     1321 cccgacgtga tcgagtcggc gtcggtgctc ggcccggcgg tggtcatcaa gagccatcac
     1381 aacgtgggcg gcctgcccga gcgcatgaac ttcgcgctcg tcgagccgct gcgcgacctg
     1441 ttcaaggacg aagtgcggcg cgtcggggtc gatctcgggc tggagaagga gttcgtcgtc
     1501 cgccagccgt tcccggggcc cggtctcgcg gtacgcatcg tcggcgccat cacgcgtgaa
     1561 cggctcgatc tgctgcggct cgccgaccgc atcgtggcgg acgaaatccg caaggcgggc
     1621 tggtacgagc gggtgtggca gagtttcgcg gtgctgctgc cggtccagag cgtgggcgtg
     1681 atgggcgatg cccgcaccta cgaatacacg gtggccgtcc gcgcggtgga aagcctggac
     1741 ggcatgacgg ccgactgggc gcggttgccg cacgatctgc tggcggcaat ttcgtcgcgg
     1801 atcgtgaacg aagtgcgcgg catcaaccgc gtcgtgtacg acatctcgtc gaagccgcct
     1861 tcgacgatcg aatgggaata gacgaaggca cttgatggcg caggagttcg ttcacctcca
     1921 cctgcacacg gagttctcgc tgctcgacgg cgcctgccgc gtcgacgagc tgctcgacga
     1981 agcggtcaag ctgaagatgc cggcgctcgc ggtcaccgag cacggcaaca tgttctcgtc
     2041 ggtcgtcttc cacgatcacg cgaaagaccg cggactgaag ccgattctcg gctgcgaggt
     2101 ctacgtcgcc gccggcagcc gcttcgacaa gagcgggccg cagaccgaga cgaaccacct
     2161 ggt
//
LOCUS       DASSYW010000124         2115 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_568149, whole genome shotgun sequence.
ACCESSION   DASSYW010000124 DASSYW010000000
VERSION     DASSYW010000124.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2115)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2115)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2115
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_568149"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..577)
                     /locus_tag="VFN38_01960"
     CDS             complement(<1..577)
                     /locus_tag="VFN38_01960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal-associated domain-containing
                     protein"
                     /protein_id="HET9010545.1"
                     /translation="MTSTTTPATPAAPASPAEQTPERVVIPVTGMTCAACQSRVQRTL
                     ARTPGVVDASVNLMMGNATVAYDPAAVDPGALVETIRATGYGAELPADDTTAFDEQTA
                     RDRATAEEFTDLRRKAVASGIAGAIAMVVSMPLMSRPAVDASGHAMQGATDPVMRWAM
                     TSLDPALRSALPWLYAIPARVLAWTLLVITLA"
     gene            complement(590..976)
                     /locus_tag="VFN38_01965"
     CDS             complement(590..976)
                     /locus_tag="VFN38_01965"
                     /inference="COORDINATES: protein motif:HMM:NF024864.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupredoxin domain-containing protein"
                     /protein_id="HET9010546.1"
                     /translation="MTTTDWLVIAAGLAAAAWVNWYFFLADRGVARAAVAGTGAAARQ
                     QIDIVVQGGYSPATIRVEAGRPVRLVFDRQETSSCSEEVVFPDFGLRKFLPAHQKTAL
                     EVTPPAPGNYDFTCGMGMLHGRLIAE"
     gene            1174..>2115
                     /locus_tag="VFN38_01970"
     CDS             1174..>2115
                     /locus_tag="VFN38_01970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010547.1"
                     /translation="MITVRTCVRLGGVLALLATACTESTGPRERTDRILFVSDRDDAT
                     GKQDIFRMRPDGSDLENLTRLPADYSDLDATRDGSIVIFAAYRAPDAGSPVVSPDCPA
                     RIWRMAPDGSQLRALTSGYRCSFNPRLSPGNTRIAYQRDADIYVANLDGTGETLVTAG
                     LPAVQPSPCGAIPNVTVRLTGWSGEDRVSFWRGICQAGTTYYTVDASGQDLRVVDVSS
                     PQVVWLSPDRVRIVFTLGGQLWVRNVDGSGQRALAATGGFPDDGFSARPNPWSPDGKW
                     VVFTDANGRPAAAGVDDGTIKPLVARTNVEFGGWSPDD"
BASE COUNT          291 a          776 c          743 g          305 t
ORIGIN      
        1 ccgcgagcgt gatcaccagc agcgtccacg cgaggacacg ggcgggaatc gcgtacagcc
       61 aaggcagcgc gctacgcaac gcggggtcca gcgacgtcat cgcccagcgc atcaccgggt
      121 cggtggcgcc ctgcatggcg tggccgctcg cgtccaccgc cggccggctc atgagcggca
      181 tcgacacgac catcgcgatg gcgccggcga tgccgctcgc caccgccttg cggcgcaggt
      241 cggtgaactc ctcggccgtc gcccggtcgc gcgccgtctg ctcgtcgaac gcggtggtgt
      301 cgtccgcggg gagctccgcg ccgtagcccg tcgcccggat cgtctcgacg agcgcgcccg
      361 gatcgaccgc ggcgggatcg tacgccaccg tcgcgtttcc catcatcagg ttcaccgacg
      421 cgtccaccac gccgggcgtc ctggcgagcg tccgctgcac gcggctctgg caggccgcgc
      481 aggtcatccc ggtcacggga atgacgacgc gttccggcgt ctgctccgcc ggggaagcgg
      541 gtgcggcggg ggtggcgggg gtggtcgtgg aagtcatggc gtctccgcgc tattcggcga
      601 tcagccggcc gtgcagcatg cccatgccgc aggtgaagtc gtagttgccc ggtgcgggcg
      661 gagtcacctc gagcgccgtc ttctggtgcg cggggaggaa cttccgcagc ccgaagtccg
      721 ggaagaccac ctcctccgag cagctcgacg tctcctgccg gtcgaagacg agccgcacgg
      781 ggcgccccgc ctccacgcgg atcgtggcgg gggaatagcc cccctggacg acgatgtcga
      841 tctgctgccg cgccgcggcc ccggtgccgg cgacggcggc gcgggcgacc ccgcggtcgg
      901 cgaggaagaa gtaccagttc acccaggcgg cggcggcgag gccggcggcg atgacgagcc
      961 agtcggtggt ggtcatgtgg tcgagtctcc gttgcctgaa cgctatatac cccccacccc
     1021 tatgtcaacc ggggtgcgct ggcatgccct tgcccggcct cgtcgcgtct ccgatgttgt
     1081 ggccccttcc gcggctgtcg cggcagctgc gggacgacgc gacggccccg cgatacgggg
     1141 agctgcattc cagcggatcg acggagcggg atgatgatca cggtgcgaac ctgcgtgcga
     1201 ctcggcggcg tgctcgcgct gctggctacg gcgtgcaccg agagcaccgg cccgcgcgag
     1261 agaacggacc gcatcctctt cgtcagcgac cgggatgacg ccaccggcaa gcaggacatc
     1321 ttccggatgc gcccggacgg cagcgacctc gagaacctca cgcgcctgcc ggccgactat
     1381 tccgatctcg acgccacccg cgacggcagc atcgtgatct tcgcggccta ccgagcgccg
     1441 gatgctgggt cgccagtcgt ctcgcccgat tgccccgcgc ggatctggcg gatggcgccc
     1501 gacggatcgc agctccgcgc gctcacgagc ggctaccggt gcagcttcaa cccgcgcctc
     1561 tccccgggca acacccgtat cgcctaccag cgcgacgccg acatctacgt ggccaacctc
     1621 gacggcacgg gcgagacgct cgtcacggcc gggctccccg ccgtgcagcc ctccccgtgc
     1681 ggcgccatcc cgaatgtgac ggtgcgcctc accggctggt ccggcgagga ccgtgtgtcg
     1741 ttctggcgag gcatctgcca ggcggggacc acctactaca ccgtcgatgc gagcggccag
     1801 gacctgcggg tggtcgacgt gtcgagtccg caggtcgtct ggctctcccc cgaccgcgtc
     1861 cggatcgtct tcacgctcgg cgggcagctc tgggtccgga acgtcgacgg gagtggccag
     1921 cgcgccctcg cggccaccgg cggcttcccc gacgacggct tctccgcgag gccgaatccc
     1981 tggtcgcccg acggcaagtg ggtggtcttc accgacgcga acggtcgccc cgccgccgcc
     2041 ggcgtcgacg acggaacgat caagccgctc gtggcgcgga cgaacgtcga gttcggcggc
     2101 tggtctcccg acgac
//
LOCUS       DASSYW010000125         2130 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_107492, whole genome shotgun sequence.
ACCESSION   DASSYW010000125 DASSYW010000000
VERSION     DASSYW010000125.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2130)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2130)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2130
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_107492"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..681)
                     /locus_tag="VFN38_01975"
     CDS             complement(<1..681)
                     /locus_tag="VFN38_01975"
                     /inference="COORDINATES: protein motif:HMM:NF015400.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="saccharopine dehydrogenase NADP-binding
                     domain-containing protein"
                     /protein_id="HET9010548.1"
                     /translation="MRMLVLGAGLQGSACAYDLLQNPAVSQVRLADLRFEHLPAFLAP
                     LSGQRLIPTTLDVRDRDAVLALMRESDAVMSAIPYYFNLQLAECAVEAGVHFCDLGGN
                     TEIVFQQKALADRAKAKGITVVPDCGVAPGMVNILAEHGIRQLDTVESVRIYVGGLPQ
                     HPEPPLNYQIVYSLEGVLDYYTTLSWVVRGGKREQVVALSERETVHFPEPVGDLEAFH
                     TAGGLSTMA"
     gene            793..1260
                     /locus_tag="VFN38_01980"
     CDS             793..1260
                     /locus_tag="VFN38_01980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HET9010549.1"
                     /translation="MTTPQDPSIDAGWRSRLIDDDAGIARLLQRTRRIAVLGIKTADT
                     NQPAYYVPLYAQKAGYEIVPVPVYYPEVVEILGQPVHRTVAAISPPVDMVNVFRRPRD
                     IPAHVDDIIAAKPASVWFQLGIRNAEAAERLARAGIEVVQDRCLLVELQNIGR"
     gene            complement(1291..2088)
                     /locus_tag="VFN38_01985"
     CDS             complement(1291..2088)
                     /locus_tag="VFN38_01985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010550.1"
                     /translation="MTSMPRRLPTRALAIALGLALAGPASAAAQWGRSPLPRSRADVL
                     LDAGLWPQAEEAYYAQSRLRPRAPAPRAALGRYLAMKGAVMPGTVLIEEALKFGLDSS
                     VARALLKPWRSVLEWREIATIRADSSLRVRPPRDSAALFQLPLPARPAAEGETRVRYR
                     DTVWADVVPRLIGSDSLYSRSPRVGIELIERLVPSLDTTTMRLTLHADARSTLKARGT
                     RYPLLRDAQDVRVLMTAGRSLSLPAALRELAPKWWQVDLVHGVLVVR"
BASE COUNT          318 a          791 c          746 g          275 t
ORIGIN      
        1 cgccatcgtc gagagtcccc ccgcggtatg gaacgcctcg aggtcgccca ccggctcggg
       61 gaagtgcacc gtctcgcgct ccgacaacgc caccacctgc tcgcgcttcc cgccgcgcac
      121 cacccacgac agcgtcgtgt agtagtcgag caccccctcc agcgagtaca cgatctggta
      181 gttgaggggc ggctccggat gctgcggcag cccgcccacg tagatccgca ccgactccac
      241 ggtgtcgagc tggcggatgc cgtgctccgc caggatgttc accatccccg gcgcgacgcc
      301 gcagtccggc accaccgtga tccccttcgc cttcgcgcgg tcggccagcg ccttctgctg
      361 gaagacgatc tccgtgttgc cccccaggtc gcagaagtgg acgcccgctt ccacggcgca
      421 ctcggcgagc tgcaggttga agtagtaggg gatcgcgctc atgacggcgt ccgactcgcg
      481 catcagggcg agcaccgcgt cacggtcgcg gacgtcgagc gtggtgggga tcagtcgctg
      541 gccggagagc ggcgcgagga aggcgggaag gtgctcgaac cgcaggtcgg cgagccggac
      601 ctggctcacc gccgggttct ggagcaggtc atacgcgcac gcggagcctt gcaggccagc
      661 gccgaggacg agcattcgca tcaggacgat ttctccatgg cggtcgtgtc agagccctgc
      721 caaatgtaac cgggcggcgg cgacccgggc caatcgcgcg ggcgcgcacg ctccctgcac
      781 cctggcgcgg gcatgacgac tccccaggat ccttccatcg acgcaggctg gcggtcccgt
      841 ctcatcgacg acgacgccgg gatcgcgcgg ctgctgcagc gcacgcgccg catcgcggtg
      901 ctcgggatca agaccgccga caccaaccag ccggcctact acgtcccgct ctacgcccag
      961 aaggccggct acgagatcgt gccggtgccg gtctactatc ccgaggtggt cgagatcctc
     1021 ggccagccgg tccatcgcac ggtggccgcc atctcgcccc ccgtggacat ggtgaacgtc
     1081 ttccggcggc cccgcgacat ccccgcccac gtggacgaca tcatcgcggc gaagccggcg
     1141 tcggtgtggt tccagctggg catccgcaac gccgaggcgg ccgagcggct cgcgcgcgcc
     1201 gggatcgagg tggtgcagga ccgctgcctg ctggtggagc tccagaacat cggacggtga
     1261 gggggccgcc cgtgcgggcg gtgggcgccg tcagcgcacc accagcaccc cgtgcaccag
     1321 gtccacctgc caccacttcg gcgccagctc gcgcagcgcc gccggcagcg agagcgaacg
     1381 ccccgccgtc atcagcaccc gcacgtcctg cgcgtcgcgc agcagcgggt agcgcgtgcc
     1441 ccgcgccttg agggtcgaac gcgcgtcggc gtggagcgtg agccgcatcg tcgtcgtgtc
     1501 gagcgagggc accagccgtt cgatcagctc gatcccgacc cggggcgatc gcgagtacag
     1561 gctgtccgac ccgatgagcc gcggcacgac gtcggcccac accgtgtcgc gatagcgcac
     1621 ccgcgtttcc ccctcggcgg cggggcgcgc cggaagggga agctggaaca gcgcggcgct
     1681 gtcgcgcggc ggccgcacgc gcagcgagga gtcggcgcgg atggtggcga tctcccgcca
     1741 ctcgagcacc gaccgccagg gcttcagcag cgcccgggcg accgacgagt cgagcccgaa
     1801 cttgagcgct tcctcgatca gcaccgtccc cggcatcacg gcgcccttca tggccaggta
     1861 gcggccgagc gccgcccgcg gcgccggtgc ccgcggccgg agcctcgact gcgcgtagta
     1921 ggcttcttcc gcctgcggcc acagccccgc gtcgagcagc acgtcggcgc gcgaccgcgg
     1981 caggggcgag cgcccccact gggccgccgc cgaggccgga ccggcgagcg cgaggcccag
     2041 cgcgatcgcg agcgcccggg tcggcagccg gcgcggcatg gaagtcatgg ctgcccgatg
     2101 cgcgcgagca ggatacggtc cggatcgaag
//
LOCUS       DASSYW010000126         2320 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_33885, whole genome shotgun sequence.
ACCESSION   DASSYW010000126 DASSYW010000000
VERSION     DASSYW010000126.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2320)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2320)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2320
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_33885"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1318
                     /locus_tag="VFN38_01990"
     CDS             <1..1318
                     /locus_tag="VFN38_01990"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0098561 - methyl accepting chemotaxis
                     protein complex [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HET9010551.1"
                     /translation="YRAIGKPAEAAAVLAKNSAALDQVDRALESLRAEGQRRMAERQN
                     DAAHTLRQNESLLALVIVLAMAVGILSSISTSRAVTRPLAALTRDMEAIGQGDLRRSD
                     VRRHALGSAEYETLAAAFDQARERLRGLLSEMQRQSDEVAAAAAELAASAGGASESTQ
                     HVAAAVTEMAHGAGLQLDVLTGAGSAVEQLAASGRTIQDALKESQSRGREIRTSANST
                     AQEIGHAVDSLLAAREVFDRSVKEIATLRESLGVIDEFATTISEIASQTNLLALNAAI
                     EAARAGDAGRGFAVVAEEVRKLAEESGRAASQVTTNVGRIREGVMGTSRAVESGTTQM
                     RDVTKIADAARQALAHIQAAVERVEEASARVGEAVGGNATAISSVEEAIAKAGDTAQN
                     HAASAQQVAAATEETSASVEELEATSNMLNDSARRVRERVQEFRLE"
     gene            complement(1389..1793)
                     /locus_tag="VFN38_01995"
     CDS             complement(1389..1793)
                     /locus_tag="VFN38_01995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010552.1"
                     /translation="MRKLLALVLLAGVAACSLDTATAPLVGDVSGTYSLQTMNGSPLP
                     LTLVSHDTTFVIDSDVLILTSAGEWNETVSYRQTVGTAATTNESLPLTGFWTRTGNQM
                     NFRTAQGLLYVGTASESALTLSDNAFTYVFTR"
     gene            complement(1983..2056)
                     /locus_tag="VFN38_02000"
     tRNA            complement(1983..2056)
                     /locus_tag="VFN38_02000"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2020..2022),aa:Asn,seq:gtt)
     gene            complement(2119..>2320)
                     /locus_tag="VFN38_02005"
     CDS             complement(2119..>2320)
                     /locus_tag="VFN38_02005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010553.1"
                     /translation="EAGAGGGEVVAAGRPEEVAAVAGSHTGEWLRTVLPDWDKPSGAR
                     RAAHTGKPSIATTSPRTRAKAS"
BASE COUNT          377 a          780 c          869 g          294 t
ORIGIN      
        1 ctaccgcgcg atcggcaagc ccgccgaggc ggccgcggtg ctcgccaaga attccgccgc
       61 gctcgatcag gtggatcgcg cgctggaaag cctccgagcc gaagggcagc gtcgcatggc
      121 cgagcgccag aacgacgccg cgcacacgct gcgacagaac gagagcctgc tcgcgctcgt
      181 gatcgtgctc gcgatggcgg tgggcatcct ctcgagcatc tccacctcgc gcgccgtcac
      241 gcggccactc gccgcgctga cgcgcgacat ggaagcgatc ggccagggcg acctgcgccg
      301 cagcgacgtc cgccgccacg ccctcggctc ggcggaatac gagacgctcg ccgcggcgtt
      361 cgaccaggcg cgcgaacggc tgcgcggcct gctctcggag atgcagcggc agtccgacga
      421 ggtggcggcg gcggcggcgg agctcgcggc ctccgccgga ggagcctcgg agagcacgca
      481 gcacgtggcg gcggccgtca cggagatggc gcacggcgcc ggcctgcagc tggacgtgct
      541 caccggcgcg ggcagcgccg tggagcagct cgccgcgtcc gggcgcacga tccaggacgc
      601 cctcaaggaa agccagtcgc gcggacgcga gatccgcacg tcggccaact ccacggccca
      661 ggagatcggc cacgcggtgg acagcctcct cgccgcgcgc gaggtgttcg accgcagcgt
      721 gaaggagatc gccacgctgc gcgagagcct cggcgtgatc gacgagttcg cgacgacgat
      781 ctcggagatc gcgtcgcaga cgaacctgct ggcgctcaac gcggccatcg aggccgcccg
      841 cgccggcgat gccggccgcg gcttcgccgt cgtggcggag gaggttcgga agctggccga
      901 ggagagcggc cgcgccgcca gccaggtgac gaccaacgtg gggcgcattc gcgagggcgt
      961 gatgggcacc tcgcgggcgg tggagagcgg cacgacccag atgcgcgacg tcacgaagat
     1021 cgccgacgcg gcacgccagg cgctggcgca catccaggcc gccgtggagc gcgtggaaga
     1081 ggcgtcggcg cgcgtgggcg aagcggtggg cggcaacgcc acggcgatca gctcggtgga
     1141 agaggcgatc gcgaaggcgg gcgacaccgc gcagaatcac gccgcgtcgg cgcagcaggt
     1201 ggctgccgcc accgaggaga cctcggcatc ggtggaggag ctcgaggcga cctccaacat
     1261 gctgaacgac tccgcgcggc gcgtgcgcga gcgcgtgcag gagttccggc tcgaatagcg
     1321 ggtggcggct ccggaaacac ggacggccgc ccgagggcgg ccgtccgtgc gttcacgcca
     1381 gggacgcgtc agcgcgtgaa cacgtaggtg aacgcgttgt ccgacagcgt cagcgccgac
     1441 tcgctggcgg tgccgacgta cagcaggccc tgagcggtgc gaaagttcat ctggttgccg
     1501 gtgcgcgtcc agaagcccgt cagcggcagc gactcgttgg tggtggccgc ggtcccgacg
     1561 gtctgccgat agctcaccgt ctcgttccac tcgccggcgc tggtgaggat gagcacgtcg
     1621 gagtcgatga cgaaggtggt gtcgtgcgac accagcgtta aggggagcgg gctcccgttc
     1681 atcgtttgca gggaataggt gccggagacg tcaccgacca gtggagcggt ggcggtatcg
     1741 agcgagcacg cggcgacgcc ggcgagcagg acgagcgcga ggagctttcg catggtgggt
     1801 tccgagagct ggatgccgac ggcgtgatgc gaggcgcatg ccgacgcgat cgtggcactg
     1861 cagtctgcac tgcggagaac cttgcgtggg tgacggacgt caccggacac acagcattcc
     1921 cggggaaaaa aaccggcccg ccactgctgc ggcgggccgg cgaagtcggc gtgatgatca
     1981 agctccccag gtaggacttg aacctacgac cctccgatta acagtcggat gctctgacca
     2041 actgagctac tggggaatgg tgcggtgcag acccccaaat ttagtcccgt ggggggtgaa
     2101 gtcaaccacg ccggcggcct acgaggcctt ggcgcgcgtg cgcggcgagg tggtggcgat
     2161 gctcggcttc cccgtgtgcg ccgctcggcg cgcgcccgac ggcttgtccc agtcgggcag
     2221 cacggtgcgc agccattccc ccgtgtgcga gcccgcgacg gcggcgacct cctcgggacg
     2281 tcccgccgcc acgacctcgc cacctcccgc gcccgcctcg
//
LOCUS       DASSYW010000127         4712 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1286500, whole genome shotgun sequence.
ACCESSION   DASSYW010000127 DASSYW010000000
VERSION     DASSYW010000127.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4712)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4712)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4712
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1286500"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1610)
                     /locus_tag="VFN38_02010"
     CDS             complement(<1..1610)
                     /locus_tag="VFN38_02010"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HET9010554.1"
                     /translation="MRRFALLSLLLAAPLAAQPARPADLVVTNARIYTVDDARPVVTA
                     MAVRDGVVLFTGSAREALALRGSGTRVVDLGGRTVIPGMVDAHAHLLGLGQSLRNVDL
                     VGARSYDEVIARVVAFAKGQPEGTWILGRGWDQNDWGDTRFPTHEALSRALPNHPVWL
                     TRVDGHAGLDNAAALRAAGVTAASADPSGGRIERTTTREPTGVFIDNAKSLVERAIPA
                     PSREDTRRAISAAISESHRWGLVGLHDAGESRATIDLLEEMAKAGQLPFRLYVMVGDD
                     SAAIAHYLARGPQSGLYGNHLWIRAFKLYADGALGSRGAALLEPYADDPNNRGLLLTA
                     PAHIQDVARRALRAGFQVNTHAIGDRGNRVVLDAYDAALRATPTADHRFRVEHAQILN
                     HDDIPRFAELGVIPSMQAVHQTSDMYWAGSRLGPGRLLGAYAWRSLLNTGVVVPNGSD
                     FPVEAVNPLLSFHSAVSRQDAENWPVGGWMPEQRMTRDEALKAMTIWPAYAGFQEATM
                     GSLSPGKLADFVVLDRDIMTVPERDILGT"
     gene            complement(1832..2596)
                     /locus_tag="VFN38_02015"
     CDS             complement(1832..2596)
                     /locus_tag="VFN38_02015"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HET9010555.1"
                     /translation="MARYLSLVGRWAAVALCCAPLAAVHAQQLPATLVGVVRDTAGVP
                     IPGVEVRYRGGGTDVVSVRTNDSGGFRMVNLPLGTASVSLRRMGFAPSSLEVRLRAGR
                     TDSLVISLSALATTLAGVLVEDEYEARSHRLLAGFWERRSRGFGYFLTRDEIEKRDAH
                     EFVDLARMVPSVTIGTRNGRRTIRFRSSTILDCPPQYVVDGMRIENGSPDEFIPQDVE
                     ALELYSGPATIPPQFAPRFNSYTCGAVVIWTRLPGT"
     gene            complement(2648..>4712)
                     /locus_tag="VFN38_02020"
     CDS             complement(2648..>4712)
                     /locus_tag="VFN38_02020"
                     /inference="COORDINATES: protein motif:HMM:NF015148.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0035673 - oligopeptide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006857 - oligopeptide transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="oligopeptide transporter, OPT family"
                     /protein_id="HET9010556.1"
                     /translation="LALKVSLTVSASIPIAVLSITIFRYISRAFGMRPATILQNNLVQ
                     TTGSAGESIAAGIAFTLPALLLLGYELPWTKVMAIGIVGGILGVLFLVPLRRSLIVKE
                     HGNLKYPEGTACAQVLIVGEERGVQAKTVFMGFGLGAAYKFLNAGLHLFLEVPRRAFT
                     SRLATGQTQLFGEIQAEISPELTGVGYIIGPRIAGFLFAGGVLSYFCLIPAIKLFGAG
                     LAAPIFPATNLISEMTAGQVRSNYVFYIGAGAVTAAGLITLGRGLPTIWGALVAGLGD
                     FRGTSGENGTARTERDLSMGIVLAGTLACLAAMVLLPQIGINIVGGILALFFAFLFVT
                     VSARITGQIGSSANPVSGMTVATLLLTSLMFLAAGWVGIEHRVLALSIGGVVCVAAST
                     AGATSQDLKTGFLVGATPRYQQIGLLIGVTASALLVGGIIQFLNDAKTTIVPKAYPGI
                     QVSAIEPDARFALANGRLVPAGEAPGTPSYRVGRLFEQTGNALAGKYLVDDGGAIRYL
                     VDPGVGGRERVNYDGREIEKLDSPKAQIMALVVDGILTQKLSWGLILVGAFLAIAIEL
                     IGIPSLPVAVGVYLPISTSATMFMGGVIRWLVDRRRTPAEREGPDADSGPGVLFSSGL
                     IAGGAIMGVVLAGLAARQWDQAFNLTQVVGAFGESNILSVVFYVVLLAVPLYLVARRV
                     QRTIG"
BASE COUNT          733 a         1681 c         1686 g          612 t
ORIGIN      
        1 gtgccgagga tgtcgcgctc cggcaccgtc atgatgtccc ggtcgaggac gacgaagtcc
       61 gccagcttgc cgggcgacag cgagcccatc gtcgcctcct ggaaacccgc atacgccggc
      121 cagatcgtca tcgccttgag cgcttcgtcg cgcgtcatgc gctgctcggg catccacccg
      181 cccaccggcc agttctcggc gtcctgccgc gagaccgccg agtggaagga gagcaggggg
      241 ttcaccgcct cgacggggaa gtcgctgccg ttcggcacga cgacgccggt gttgagcagc
      301 gaccgccacg cgtacgcgcc gagcagccgt cccgggccga gccggcttcc cgcccagtac
      361 atgtcgctgg tctgatgcac cgcctgcatc gaggggatca ccccgagctc ggcgaagcgc
      421 gggatgtcgt cgtggttgag gatctgcgcg tgctccacgc ggaagcggtg gtccgcggtc
      481 ggggtggccc gcagcgccgc atcgtaggcg tcgagcacga cgcggttgcc gcggtcgccg
      541 atggcgtggg tgttcacctg gaagcctgcg cgcagcgcgc gccgcgcgac gtcctggatg
      601 tgcgcggggg cggtgaggag caggccccgg ttgttcggat cgtcggcgta cggctccagc
      661 agcgccgcgc cgcgcgagcc gagcgcgccg tcggcgtaga gcttgaaggc gcggatccac
      721 agatggttgc catacagccc gctctgcggg ccgcgggcga ggtagtgcgc gatcgcggcc
      781 gagtcgtcgc ccaccatcac gtagaggcgg aaggggagct ggcccgcctt cgccatctcc
      841 tccaggaggt cgatcgtggc gcgcgactcg cccgcgtcgt gcagtccgac gagcccccag
      901 cggtgcgact cggagatcgc agcgctgatc gcgcggcggg tgtcttcccg cgacggcgcg
      961 ggaatggcgc gctccacgag cgacttcgcg ttgtcgatga acaccccggt gggctcgcgc
     1021 gtcgtcgtgc gctcgatccg tcccccgctc gggtcggcac tggcggcggt gacgccggcg
     1081 gcccgcaggg cggcggcatt gtcgagcccc gcgtggccgt ccacccgcgt gagccacacg
     1141 ggatggttcg gcagcgcgcg cgagagcgcc tcgtgggtgg gaaagcgggt gtcgccccaa
     1201 tcgttctggt cccacccgcg gccgaggatc caggtgccct cgggctggcc cttggcgaag
     1261 gccacgaccc gcgcgatcac ctcgtcgtac gagcgggcgc cgacgagatc cacgttgcgc
     1321 agcgactggc cgagccccag caggtgggcg tgcgcgtcca ccatgccggg gatcaccgtg
     1381 cggccaccca gatccacgac gcgggtgccc gagccgcgca gcgccagcgc ctcgcgcgcc
     1441 gagccggtga acagcacgac gccgtcgcgc accgccatgg cggtgacgac ggggcgcgcg
     1501 tcgtccaccg tgtagatccg cgcgttggtg acgacgaggt cggcggggcg cgcgggctgg
     1561 gcggccagcg gagcggcgag gaggagcgag agcagggcga agcggcgcat gaagtcgggt
     1621 tgagggatcc ggaaatgtgc cgtcgccgcg caggggagag caaccgcgtc tcccatcgcc
     1681 gcggatcgcc gtggcgccgc tgccccgaag cgggggtgat gcaggcctgg cgacgggcgg
     1741 aacgatcgag gggccggcct ccgcgcgcgg aggccggccc ctcgccggac cggagcgcgg
     1801 acgggcgcgc cccgtccgca gggatcggcg atcaggtgcc cggcagccgc gtccagatca
     1861 ccaccgcgcc gcaggtgtag gagttgaacc gcggcgcgaa ctgcggcggg atggtggcgg
     1921 ggccggagta gagctcgagc gcctcgacgt cctgcgggat gaactcgtcg ggcgagccgt
     1981 tctcgatccg catcccgtcc accacgtact gcggaggaca atccaggatg gtgctgctgc
     2041 ggaaccggat cgtgcgccgg ccgttccgcg tgccgatcgt cacgctcggc accatgcgcg
     2101 ccaggtccac gaactcgtgc gcgtcgcgct tctcgatctc gtcgcgcgtg aggaagtagc
     2161 cgaacccgcg cgaacgccgc tcccagaacc ccgcgagcag gcggtgcgac cgcgcctcgt
     2221 actcgtcctc caccagcacg ccggcgagcg tcgtcgccag cgcgctgagg gagatcacga
     2281 gggagtcggt gcgccccgcc cgcaggcgca cctcgaggct cgacggggcg aaacccatcc
     2341 gacgcagcga cacgctcgcc gtgccgaggg gaaggttgac catccggaac ccgcccgagt
     2401 cgttcgtccg gacggacacg acgtcggtgc cccccccccg gtagcgcacc tccacccccg
     2461 gaatggggac accggcggtg tcgcgcacga caccgaccag cgtggcggga agctgctggg
     2521 catgcaccgc ggcgagcggg gcgcagcaca gcgccaccgc cgcccagcgg ccaacgagac
     2581 tcaggtacct ggccatggat cttccctccc cctctcgccg cccggagtcg ggcggcgagg
     2641 catgtcgtca accgatggta cgctgcacgc gccgggccac caggtagagc ggaaccgcca
     2701 gcagcacgac gtagaacacc accgacagga tgttgctctc gccgaacgcg cccaccacct
     2761 gggtcaggtt gaacgcctgg tcccactggc gcgccgcgag gcccgcgagc accactccca
     2821 tgatcgcgcc cccggcgatg agcccggacg agaagaggac ccccggtccc gaatccgcgt
     2881 caggtccctc gcgctccgcc ggcgtgcggc ggcgatccac cagccagcgg atcacccctc
     2941 ccatgaacat cgtggccgag gtggagatcg gcagatagac ccccaccgcc accgggagcg
     3001 acgggatgcc gatcagctcg atggcgatcg ccaggaacgc ccccaccagg atgagccccc
     3061 acgacagctt ctgcgtcagg atgccatcca ccaccagcgc catgatctgc gccttggggg
     3121 aatccagctt ctcgatctcg cgcccgtcgt agttcacccg ctcgcggccg ccgactcccg
     3181 ggtcgacgag gtaccggatg gctcccccgt cgtccaccag gtacttcccc gccagcgcat
     3241 tcccagtctg ctcgaagagc cggcccacgc gatagctcgg agtgccgggg gcctcgccgg
     3301 ccgggacgag acgcccgttg gcgagggcga accgcgcgtc gggctcgatc gccgacacct
     3361 ggatccccgg ataggccttc gggacgatcg tcgtcttcgc gtcgttcagg aactggatga
     3421 tcccgccgac gagcagcgcg ctggccgtga cgccgatgag caggccgatc tgctggtagc
     3481 gcggggtcgc gcccacgagg aagcccgtct tcagatcctg cgacgtcgcc cccgccgtgg
     3541 acgcggcgac gcacaccacg ccgccgatgg acagtgccag cacgcggtgc tcgatcccca
     3601 cccagcccgc cgcgaggaac atcagcgagg tgagaagcag cgtcgccacc gtcatccccg
     3661 acaccggatt ggccgacgag ccgatctgcc cggtgatgcg cgccgacacc gtgacgaaca
     3721 ggaaggcgaa gaagagggcc aggatgccgc ccacgatgtt gatgccgatc tgcggcagca
     3781 gcaccatggc cgcgaggcag gccagcgtgc ccgccagcac gatccccatc gacaggtcgc
     3841 gctcggtgcg cgccgtcccg ttctctccgc tggtgccgcg gaagtcgccc aggccggcga
     3901 cgagcgcgcc ccagatggtg ggcagtcccc tgccgagggt gatgagcccc gcggcggtga
     3961 ccgcgccggc gccgatgtag aacacgtagt tggagcgcac ctgccccgcc gtcatctcgc
     4021 tgatgaggtt cgtggccggg aagatgggcg cggcgagccc cgcgccgaac agcttgatgg
     4081 cggggatgag gcagaagtag gagagcacgc cgccggcgaa caggaagccg gcgatgcgcg
     4141 ggccgatgat gtagcccacg ccggtgagct cggggctgat ctccgcctgg atctcgccga
     4201 agagctgcgt ctgccccgtg gcgagccggc tcgtgaaggc gcgccgcggg acctcgagga
     4261 acaggtgcag gccggcgttc aggaacttgt acgccgcgcc gagcccgaag cccatgaaca
     4321 cggtcttggc ctgcacgccc cgctcctccc ccacgatgag cacctgcgcg cacgccgtcc
     4381 cctcgggata cttgaggttg ccgtgctcct tcacgatcag gctgcgtcgc agcggcacga
     4441 ggaagagcac ccccaggatg ccgccgacga tgccgatcgc catgaccttc gtccacggca
     4501 gctcgtagcc cagcagcagc agcgcgggga gggtgaaggc gatgccggcg gcgatcgact
     4561 cgcccgccga cccggtggtc tggacgaggt tgttctggag gatcgtcgcc ggccgcatcc
     4621 cgaacgcgcg cgagatgtag cggaagatgg tgatcgacag caccgcgatg gggatcgagg
     4681 cgctgacggt gaggctcacc ttgagcgcga gg
//
LOCUS       DASSYW010000128         2104 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_107440, whole genome shotgun sequence.
ACCESSION   DASSYW010000128 DASSYW010000000
VERSION     DASSYW010000128.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2104)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2104)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2104
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_107440"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..269
                     /locus_tag="VFN38_02025"
     CDS             <1..269
                     /locus_tag="VFN38_02025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010557.1"
                     /translation="FEDWYKNPGPREWRTHFHVPVFLTELGHGFGTTRFGLEQALAVH
                     KKTPLSTHLEIETYTWDVLPDHLKTGDIVEYVTRELEWVKGQLV"
     gene            381..1262
                     /locus_tag="VFN38_02030"
     CDS             381..1262
                     /locus_tag="VFN38_02030"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HET9010558.1"
                     /translation="MKVGFIGLGRMGAGMAGRVQGAGYQLTVFDAIATQTAPFAAAGA
                     RVATSVADLCQERDIVVSMLVEDATILSVATGPEGLVESLTPGAIHLVMGTHGVATIR
                     ALEARHAEAGQVLVAAPVLGRPDLAAAGQLGIVVAGPIDAATRVRPLLDAMGRRIFEA
                     GPKPESATAIKLANNAVLGCAMMAMAEGFSLVRRYDVDPQVFQDVMTEGLFSAPAYKV
                     YGQKMVDESYDQVGSPITVGLKDAGLIAAAAALARVPMPSHNVYLDRLLGAVAHGDAD
                     RDQAVLAREQNRAAGIE"
     gene            1287..1559
                     /locus_tag="VFN38_02035"
     CDS             1287..1559
                     /locus_tag="VFN38_02035"
                     /inference="COORDINATES: protein motif:HMM:NF020496.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1905 domain-containing protein"
                     /protein_id="HET9010559.1"
                     /translation="MAKTFTARLLRYKGKAVWYFAEIPKRHAPKPTHPWGRTPVVATV
                     DGHTWTTSVWRAKAGDGSLLAVPKKIRGAKGDSDTVRVHLELIPED"
     gene            1771..>2104
                     /locus_tag="VFN38_02040"
     CDS             1771..>2104
                     /locus_tag="VFN38_02040"
                     /inference="COORDINATES: protein motif:HMM:NF012415.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HET9010560.1"
                     /translation="MVRRFARLLLALGLVLWGYTSPVAPVAAGAAGIGAAGGGGGAAA
                     ITNSIADLTNVERSRAGLAPLRVEGRLMRAAQMQAEQMASLGRMDHVLRDGPYPAPTD
                     RLAAAGYKW"
BASE COUNT          342 a          714 c          745 g          303 t
ORIGIN      
        1 cgttcgaaga ctggtataag aacccggggc cgcgcgagtg gcgcacccat ttccacgtgc
       61 cggtgttcct gaccgagctg ggccatgggt tcggcacgac gcggttcggg ctggagcagg
      121 cgctggcggt gcacaagaag acgccgctct cgacgcacct cgaaatcgag acgtacacgt
      181 gggacgtgct gccggatcac ctgaagaccg gcgacatcgt cgagtacgtc acgcgcgagc
      241 tcgaatgggt gaagggacaa ttggtatagc cgggtaggcc gggtaagcca ggtaggccgg
      301 gtaggaagaa cctctcctac ccacccggct tcctaccagg cccacccggc ccgccaggcc
      361 caccaggccg gagattcagc atgaaggtcg ggttcatcgg gctcggtcgt atgggcgccg
      421 ggatggccgg gcgggtccag ggtgccggct atcagctcac ggtcttcgac gcgatcgcca
      481 cgcagacggc gccgttcgcc gcggcgggcg cgcgggtggc caccagcgtg gccgacctct
      541 gccaggagcg cgacatcgtc gtctcgatgc tcgtcgaaga cgcgacgatc ctcagcgtcg
      601 ccaccggacc cgaagggctc gtggagtcgc tcacgccggg cgcgattcac ctcgtgatgg
      661 gcacgcacgg cgtcgccacc atccgcgcgc tcgaagccag acacgccgag gccggacagg
      721 tcctggtggc cgcgccggtc ctcgggcggc cggatctcgc ggccgccgga cagctgggca
      781 tcgtcgtggc cggaccgatc gacgccgcca cgcgcgtgcg cccgctgctc gacgccatgg
      841 gccgccgcat cttcgaggcc gggcccaagc cggagtccgc cacggccatc aagctcgcca
      901 acaacgccgt gctcggctgc gcgatgatgg cgatggccga ggggttctcg ctggtccgcc
      961 gctacgacgt cgatccgcag gtcttccagg acgtgatgac ggaagggctg ttttcggcgc
     1021 cggcctacaa ggtgtacggc cagaagatgg tggacgagag ctacgaccag gtgggctcgc
     1081 cgattaccgt gggcctgaag gacgccggcc tcatcgcggc ggccgcggcg ctggcgcgcg
     1141 tgccgatgcc gagccacaac gtctatctcg atcggctgct cggcgccgtc gcgcacggcg
     1201 acgcggaccg cgatcaggcg gtgcttgccc gtgagcaaaa ccgcgccgct ggaatcgagt
     1261 aggccatagg ccttggacct taggccttgg cgaaaacctt cactgccagg ctccttcgtt
     1321 acaaggggaa agcggtctgg tacttcgcgg agatcccgaa gcgccacgcg ccgaagccga
     1381 cgcacccgtg ggggcgcacg ccggtggtcg ccacggtgga cggccacact tggacgacga
     1441 gcgtgtggcg cgccaaagcg ggtgacggaa gcctgctggc ggtgccgaag aagattcgcg
     1501 gcgccaaggg cgacagcgac accgtccgcg tccacctcga actcattccc gaagactgag
     1561 gcggccaggg cgcgcccggt ccgccgcacg ccaagcgcat caagtcgctg cgagcagtct
     1621 gtccggaccc agaaaagctc atcctggcct gcgttctgca tccagacacc aaagtgcaac
     1681 cgatgctcga atctggcacg tgcaggaacg cgtagaccgc cggtttccgg cccaaaacgg
     1741 cgcggtacgt agcttgcccc tgatcggggc atggttcggc gcttcgccag actcctgctc
     1801 gcccttggcc tcgtgctgtg gggctatacg tccccggtcg cgcccgtcgc cgcgggagcc
     1861 gcgggcatcg gtgcggctgg cggcggaggc ggcgccgcgg ccatcaccaa cagcatcgcg
     1921 gacctgacca acgtcgagcg ttcgcgcgcc ggcctcgcgc cgctccgcgt cgaggggcgg
     1981 ctgatgaggg ccgcgcagat gcaggccgag cagatggcgt cgctcgggcg gatggatcac
     2041 gtcctgcgcg acgggccgta cccggcgccg acggatcgtc tggcggcggc tggctacaag
     2101 tggc
//
LOCUS       DASSYW010000129         2292 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1783712, whole genome shotgun sequence.
ACCESSION   DASSYW010000129 DASSYW010000000
VERSION     DASSYW010000129.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2292)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2292)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2292
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1783712"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..560)
                     /locus_tag="VFN38_02045"
     CDS             complement(<1..560)
                     /locus_tag="VFN38_02045"
                     /inference="COORDINATES: protein motif:HMM:NF017828.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacyl-CoA dehydratase"
                     /protein_id="HET9010561.1"
                     /translation="MSVATPVKKEKPKVVKEDAMWLQKELINRNYHELATARQEGKKV
                     SATFVPGNLNELLMCFDFARSLPETNALQNAMRKKSGKMVLDAERDGHSEDVCTYVKA
                     DLGMMLGGETGPTCEPLPKPDVLLLSYTGCFTFMKWFELIRQKYDCETTMLHVPYQGD
                     GRINPAMRDYVVKQLKDKVIPTLERIS"
     gene            complement(557..1765)
                     /gene="bcrC"
                     /locus_tag="VFN38_02050"
     CDS             complement(557..1765)
                     /gene="bcrC"
                     /locus_tag="VFN38_02050"
                     /EC_number="1.3.7.8"
                     /inference="COORDINATES: protein motif:HMM:TIGR02263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018522 - benzoyl-CoA reductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="benzoyl-CoA reductase subunit C"
                     /protein_id="HET9010562.1"
                     /translation="MNPIPLSPSVPPAKPQVLQIVERCEALFEDLSFEAVKRWKAAQP
                     GRKAIGYMPVYVPRELIHAAGMLPVGILGGGDALEVIQGDAYYQSYICRIPRSTIELG
                     LTGRLDCLDGMLFPSICDVIRNLSGMWQMLFKDKYVRYIDVPQNYQDEVGGRFFVEEM
                     QVLREDLARLAGRAVTDADLNASIRVYNDNRAALRELYGYRAAKPWQAPTSEVYLVVR
                     AGMVLPPEEHTALVRDYLRATDAVPRPKRDNARIVLIGSFCEQPPLGLIKSIEMAGCY
                     IVDDDFMLVTRWLLDDVPADSNPLDELSKAFLHRSASTAAKYDTRREDKGVFLLKHVK
                     TRGAEGVVFAAPSFCDPALLERPMLQEILSKHGIPYTAFKYAENTGQMAPIREQAGTF
                     ADSIKLWSAA"
     gene            complement(2068..>2292)
                     /locus_tag="VFN38_02055"
     CDS             complement(2068..>2292)
                     /locus_tag="VFN38_02055"
                     /inference="COORDINATES: protein motif:HMM:NF022722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3079 domain-containing protein"
                     /protein_id="HET9010563.1"
                     /translation="LVSPQNDRMSKKFPIHPAHPERLCWGCDRYCPTDSLACGNGSER
                     TQHPVELFGDDWLEWGPGRPADAEAGADPA"
BASE COUNT          340 a          807 c          745 g          400 t
ORIGIN      
        1 gagatgcgct cgagcgtcgg gatgactttg tccttcagct gcttgacgac gtagtcgcgc
       61 atcgccgggt tgatcctgcc gtcgccctgg taagggacgt gcagcatcgt ggtctcgcag
      121 tcgtacttct ggcggatgag ctcgaaccac ttcatgaagg tgaagcagcc ggtgtaggaa
      181 agcagcagca cgtcgggctt gggcagcggc tcgcaggtgg gcccggtctc gccgccgagc
      241 atcatgccga ggtccgcctt tacgtacgtg cacacgtcct cggagtgccc gtcgcgctcg
      301 gcgtcgagca ccatcttgcc ggacttcttg cgcatcgcgt tctgcagcgc gttggtctcg
      361 ggcaggctgc gcgcgaagtc gaagcacatc agcagctcgt tcaggttgcc ggggacgaag
      421 gtcgcggaca ccttctttcc ttcctggcgg gcggtggcga gctcgtggta gttgcggttg
      481 atcagctcct tctgcagcca catcgcgtct tccttgacga ccttgggctt ctctttcttc
      541 accggcgtgg cgacactcat gcggcgctcc atagtttgat cgagtcggcg aaggtaccgg
      601 cctgctcgcg gatcggcgcc atctggccgg tgttctccgc gtacttgaac gcggtgtagg
      661 gaatgccgtg cttcgacaag atctcctgca gcatcggccg ctcgagcagc gccgggtcgc
      721 agaacgacgg cgcggcgaac accacgccct cggcgccgcg cgtcttgacg tgcttcagca
      781 ggaacacgcc cttgtcctcg cgccgcgtgt cgtacttcgc ggccgtcgac gccgagcggt
      841 gcaggaacgc cttcgacagc tcgtcgagcg gattgctgtc ggccggcacg tcgtcgagca
      901 gccagcgcgt caccagcatg aagtcgtcgt cgacgatgta gcagccggcc atctcgatcg
      961 acttgatcag gccgagcggc ggctgctcgc agaacgagcc gatcaacacg atccgcgcgt
     1021 tgtcgcgctt cggccggggc acggcgtcgg tcgcgcgcag gtaatcgcgc accagcgccg
     1081 tatgttcctc cggcggcagc accatgccgg cccgcacgac gagatagacc tccgacgtcg
     1141 gcgcctgcca cggcttcgcc gcgcgatagc cgtacagctc gcgcagcgcc gcgcggttgt
     1201 cgttgtagac gcggatcgac gcgttgaggt cggcgtccgt caccgcgcgc ccggccagcc
     1261 gcgcgaggtc ctcgcgcagc acctgcatct cctcgacgaa gaagcgcccg cccacctcgt
     1321 cctggtagtt ctgcggcacg tcgatgtagc gcacgtactt gtccttgaac agcatctgcc
     1381 acatgcccga caggttgcgg atcacgtcgc agatcgaggg gaacagcatc ccgtccaggc
     1441 agtccagccg ccccgtcagc cccagctcga tcgtcgagcg cgggatgcgg cagatgtagc
     1501 tctggtagta cgcgtcgccc tggatcacct ccagcgcatc gccgccgccc aggatgccta
     1561 ccggcagcat gcccgccgcg tggatcagct cgcgcggcac gtacaccggc atgtagccga
     1621 tcgccttgcg ccccggctgc gccgccttcc agcgcttgac cgcctcgaag ctcaggtcct
     1681 cgaacagcgc ctcgcagcgc tcgacgatct gcagcacctg cggcttggcg ggggggacgg
     1741 acggggacag agggatcgga ttcatcagcg gggctcccgg agcgaattct tgtattgtgg
     1801 taccgcaata ccgattttgg gtcgcccttc acgcaccgtt cgcgcagtcg ttgacctgcg
     1861 tcacgtcacg agggacgcgc cgacgtcgcg caattccccg cgatcgcggc ccgcggcgac
     1921 gcgcgcgccg cgccccccgc cgctcgttcg acgaacctcg ggccggctgg cccccctgct
     1981 cgcgccacca tcgccgccgc gtcgaggcgc cggcgcgagc gcaccctgcg acctctgccc
     2041 gggcgtcgcg tcgacgcccg gcgctgctca cgcggggtca gcccccgcct cggcatccgc
     2101 gggcctgccg ggcccccatt cgagccagtc gtcgccgaac agctcgacgg gatgctgcgt
     2161 gcgctccgag ccgttgccgc aggccagcga atcggtcgga cagtagcgat cgcaacccca
     2221 gcacaaccgc tccgggtggg ccgggtggat gggaaacttc ttgctcatac gatcattctg
     2281 cgggctcacc aa
//
LOCUS       DASSYW010000130         2636 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_70894, whole genome shotgun sequence.
ACCESSION   DASSYW010000130 DASSYW010000000
VERSION     DASSYW010000130.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2636)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2636)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2636
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_70894"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(64..1281)
                     /locus_tag="VFN38_02060"
     CDS             complement(64..1281)
                     /locus_tag="VFN38_02060"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HET9010564.1"
                     /translation="MALLVPVALLNYLDRQMLASMKFSVMRDIPDIGLEANWGAILAL
                     FKWVYAFLSPIGGYLADRYSRRHVIAGSLVVWSSITWATGHVTSYEQLLWTRALMGIS
                     EAFYIPAALALIADFHLGPTRSRAVGLHQMGIYVGVIIGGFGGYAADHPSLGWRWAFE
                     ICGLIGVVYAVPLFLLLRNPLRPADGGSARRPSPGAAVRELAGNPSFILLVLYFTLPA
                     LAGWIVRDWMPAILKAEFNIGQGLAGVSATLYWQTAAIAGALAGGWLADRWMRRTIRG
                     RIYVSALGMSLIVPAMFGVGYAPQTGLLWVAVAFLVLFGIGWGFFDSNNMPILCQIAR
                     PELRATGYGIMNLVSISCGGLADWGFGILRDRQVPLFGIFGVFASAAIVSILLVLMIR
                     PRHTDPSAGPAGH"
     gene            complement(1326..>2636)
                     /locus_tag="VFN38_02065"
     CDS             complement(1326..>2636)
                     /locus_tag="VFN38_02065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010565.1"
                     /translation="QSQVSPTAPVGLLFPGDPGISRGIVHTDTNNIAPRVGLAWDPRG
                     DGRMAVRAAAGVFYGSITGNEWNTTADNQPFTVRQSFPTVKTLSDPYGNLPGGVGPFP
                     FLYDPANPRFALPAQVFGPSLAFVWPYTFQGNLTFEKEVTRGLSVSASYVTALGRSLP
                     ASIDRNYPVYGPGATTANVNARRPYMPGVIGQARVLESVFKSDYHAMQLNAERRGRRF
                     SAKAYYTFGKALEDLDYQGGGLPAVQNSNRIDLERGRTSADRTHSFVFSGVWNLDYYD
                     GSSAMMKALLNDWTVSAIITLQSGAPLTISSGLDRNFDGLTNDRADIVGDPELDSDRP
                     RDELIEQWFNTAAFAQPAIGLDGSAGRSIVEGPGYRNVDLGVFRNIRLAGRTALQFRF
                     EATNVLNIVNLQNPGTALNAPNNFGKIRSARDMRRIQLGARVSF"
BASE COUNT          452 a          856 c          948 g          380 t
ORIGIN      
        1 gtcgacatcg cgagcggaaa gctgatcgcg cagtaacgat ggacattgcg gggcgtcacc
       61 cggtcagtgg ccggcaggcc ccgcgctcgg atcggtgtgc cgcggccgaa tcatcagcac
      121 gaggaggatc gagacgatgg ccgcgctcgc gaacacgccg aagatgccga agagcggcac
      181 ctggcgatcg cggaggatgc cgaagcccca gtccgcgagc ccaccgcagc tgatgctgac
      241 gagattcatg atgccgtagc cggtggcgcg cagctcgggt cgcgcaatct ggcagaggat
      301 cggcatgttg ttcgagtcga agaagcccca gccgatgccg aagagcacga ggaacgcgac
      361 ggcaacccag agcaggccgg tctggggcgc gtagccgacg ccgaacatcg ccggcacgat
      421 gagcgacatg ccgagcgcgc tgacgtagat gcggccgcgg atggttctgc gcatccagcg
      481 atcggcgagc cagccgccgg cgagcgctcc cgcgatcgcc gccgtctgcc agtagagcgt
      541 cgccgagacg ccggccaacc cctggccgat gttgaactcg gccttcagga tcgccggcat
      601 ccagtcgcgg acgatccatc ccgccagcgc cggcagcgtg aagtagagga cgagcaggat
      661 gaacgaggga ttgccggcga gctcgcggac cgcggcgccg ggcgatggcc gccgcgcgct
      721 cccgccgtcc gccggccgca gcggatttct cagcagcaga aagagcggca ccgcgtacac
      781 gacgccaatc agcccgcaga tctcgaatgc ccaccgccac ccgagcgacg gatggtcggc
      841 ggcgtatccg ccgaagccgc cgatgatcac gccgacgtaa atgcccatct ggtgcaggcc
      901 gacggcgcgc gagcgcgtcg ggccaaggtg aaagtccgcg atgagcgcca gcgccgccgg
      961 gatgtagaac gcctcgctga tgcccatcag cgcccgcgtc cacaggagct gctcgtacga
     1021 ggtgacgtgg ccggtcgccc acgtgatcga cgaccacacg accaggctgc cggcaatcac
     1081 gtggcggcgg ctgtagcgat cggcgaggta gccgccgatc gggctcagga acgcgtacac
     1141 ccacttgaag agcgcgagga tcgcgcccca gttcgcctcg agcccgatgt cggggatgtc
     1201 tcgcatcacc gagaacttca tcgaggcgag catctgccga tcgaggtagt tgagcagcgc
     1261 gacgggtacg agcagcgcca cgaccagcca cgggtagcgc gacgccggcg acttcgccgt
     1321 ggacgtcaga acgacactct cgcgccgagc tggatgcgcc gcatatcgcg cgccgagcgg
     1381 atcttgccga agttgttcgg cgcgttcagc gccgttccgg gattctgcag gttgacgatg
     1441 ttgagcacgt tggtggcctc gaagcggaac tgcagcgcgg tgcgtccggc gaggcggatg
     1501 ttgcggaaca ccccgaggtc gacgttgcga tagccggggc cttcgacgat gctgcgcccg
     1561 gcggagccgt cgaggccgat cgcgggctgg gcgaacgcgg cggtgttgaa ccactgctcg
     1621 atgagctcgt cgcgcgggcg atcgctgtcg agctcggggt cgccgacgat gtcggcgcga
     1681 tcgttggtga gcccgtcgaa gttgcgatcg aggccggacg agatcgtgag cggcgcgccg
     1741 ctctgaagcg tgatgatcgc cgacaccgtc cagtcgttca gcagcgcctt catcatcgcc
     1801 gacgagccgt cgtagtaatc gagattccag acgccggaga aaacgaagct gtgcgtgcgg
     1861 tctgccgacg tgcggccgcg ctcgaggtcg atccggttcg agttctgcac cgccggcagc
     1921 ccgccgccct ggtagtcgag gtcctcgagc gccttgccga aggtgtagta cgccttcgcc
     1981 gagaagcgcc ggccgcggcg ctcggcgttc agctgcatcg cgtgataatc gctcttgaag
     2041 acggactcga gcacgcgcgc ctggccgatg acgccgggca tgtacggccg ccgcgcgttc
     2101 acgttcgccg tcgtcgcccc cgggccgtag acggggtagt tcctgtcgat gctcgccggc
     2161 aggctgcgcc cgagcgcggt cacgtacgag gcgctcaccg acagcccgcg ggtgacttcc
     2221 ttctcgaacg tcagattgcc ctggaaggtg tacggccaga cgaaggcgag cgacgggccg
     2281 aacacctgcg ccgggagcgc gaagcgcggg ttcgccgggt catagaggaa ggggaacggt
     2341 ccgacgccgc cgggcaggtt gccgtacgga tcggacagcg tcttcaccgt cgggaaggac
     2401 tgtcgtaccg tgaacggctg gttgtcggcg gtcgtgttcc actcgttgcc ggtgatgctg
     2461 ccgtagaaga cgccggcggc agcgcgcacc gccatccggc cgtcgccgcg tggatcccac
     2521 gccagcccga cgcgcggcgc gatgttgttc gtgtcggtgt ggacgatgcc gcggctgatg
     2581 ccggggtcgc cggggaagag caggccgaca ggagccgtgg gtgagacctg cgactg
//
LOCUS       DASSYW010000131         2361 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1286429, whole genome shotgun sequence.
ACCESSION   DASSYW010000131 DASSYW010000000
VERSION     DASSYW010000131.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2361)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2361)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2361
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1286429"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..541
                     /locus_tag="VFN38_02070"
     CDS             <1..541
                     /locus_tag="VFN38_02070"
                     /inference="COORDINATES: protein motif:HMM:TIGR02241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HET9010566.1"
                     /translation="QEGVRTVAKFEVNAGRFDPYKNFKFRVKWDGRYVAGVSKVSALK
                     RTTEVVKHREGGDPSSSRKSPGRTEYDAITLERGVTHDTEFEKWANKVWNFGGGLGAE
                     VSLKDFRKDIIIELYNEAGQLVLAYKVFRAWVSEYQALPDLDANASLVAIETLKLEIE
                     GWERDGEVAEPSEPSFGKP"
     gene            684..1568
                     /locus_tag="VFN38_02075"
     CDS             684..1568
                     /locus_tag="VFN38_02075"
                     /inference="COORDINATES: protein motif:HMM:NF023568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HET9010567.1"
                     /translation="MHVATDNGMLIEYEVFGDPIDPAVLLVMGFGTQLLGWDADFCRL
                     LAARGLYVIRYDNRDCGLSTKLDEHPVDLMDFITAVMSGDVDRALAMAPYSLRDMACD
                     GMDLLHALGIDRAHVVGSSMGGMIAQKMAIEFPERVLSLTSMMSSTGEQEYGQSTPEA
                     QQVLFSPRPTDREGYIAGAERELVWASRRYGDPAQLRALAAASYDRSYYPAGVPRQLA
                     AMILDGSRADALRALDVPTLVIHGVDDTLIDPTGGERTAALVPGARLVLVEDMGHDRP
                     PALWPHLVDAISEHIKRP"
     gene            2002..>2361
                     /locus_tag="VFN38_02080"
     CDS             2002..>2361
                     /locus_tag="VFN38_02080"
                     /inference="COORDINATES: protein motif:HMM:NF016430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma factor"
                     /protein_id="HET9010568.1"
                     /translation="MSDIEIQELYATSYRRLLGQLIGVTGNVAEAEDVVQEAFVRGLD
                     HPRRLLGADNPEAWLRTVAVNLARSRWRRAQRLVGLAPRLVDAPRESDSDGHIVLLQA
                     LRALPAGQREAIALHHLA"
BASE COUNT          426 a          756 c          791 g          388 t
ORIGIN      
        1 acaggaagga gtccgcaccg tggctaagtt tgaagtgaat gccgggcgct tcgacccgta
       61 caagaatttc aagttccgcg tgaagtggga cgggcgctac gtcgccggcg tgagtaaagt
      121 gagcgcgctg aagcgcacca ccgaggtggt aaagcaccgc gaaggcggcg accccagcag
      181 cagccgcaaa tcgcccgggc gtaccgagta tgatgcgatc acgcttgaac gcggcgtcac
      241 acacgacacc gagttcgaga agtgggccaa caaggtctgg aacttcggcg gcggcctcgg
      301 ggccgaggtc tcgctcaagg acttccgcaa ggacatcatc atcgagctgt acaacgaggc
      361 cggccaactc gtacttgcct acaaggtgtt ccgggcctgg gtgtcggagt accaagcgct
      421 ccctgatctt gacgcgaatg ccagcttggt ggcgatcgag accctcaagc tggagatcga
      481 gggctgggaa cgtgatggcg aggtggcgga gccgagcgag ccgtcgttcg ggaagcccta
      541 ggcccgcccg cggtcgcctt gtggcgcaca ggcgcggaca tccgcggcgg actggggcat
      601 ccgatgggac tcgcggcgtg taacagatcc tcacgccggt tgatacccgc tcgttgctgt
      661 cgagcgagtg agaggattcc tgggtgcacg tcgcgacaga caacggaatg ctcatcgagt
      721 acgaagtctt cggagatccg atcgatccgg ccgtcctcct ggtgatgggc ttcgggaccc
      781 agctcctcgg ttgggacgcc gacttctgcc gcctactggc agcgcggggg ctgtatgtga
      841 tccggtacga caaccgcgac tgcgggctgt cgacgaagct ggatgagcac ccggtcgacc
      901 tgatggattt catcaccgct gtgatgtccg gcgacgtcga ccgagcgctc gcgatggcgc
      961 cgtactcgct gcgagacatg gcatgcgacg ggatggacct gctccacgca ctcggcatcg
     1021 atcgcgcgca cgtcgtgggg tcctcgatgg gcggcatgat cgcgcaaaag atggcgattg
     1081 agttccctga gcgggtgctc tcgttgacct cgatgatgtc gtccaccggc gagcaggagt
     1141 acggccagtc cacccccgag gcacagcagg tgctgttttc cccgcgacca acagaccgcg
     1201 agggatacat tgccggagca gaacgcgaac tcgtctgggc gtcgcgtcgg tacggcgatc
     1261 cggcacagct gcgtgccctc gccgcggcaa gctacgaccg ctcctattat ccggctggcg
     1321 taccgcggca gctggccgcg atgatcctcg acggctcacg agccgacgct cttcgggcgc
     1381 ttgacgtgcc gactctcgtc atccacggcg tggacgacac gttgatcgac ccgaccggcg
     1441 gagagcggac agcggcgctg gtgccaggag cgcgcctggt tctcgtcgag gacatgggac
     1501 acgaccgccc gccggctttg tggccacacc tggtcgatgc gatcagcgag cacatcaaga
     1561 ggccctgaca cggggaagga cgtctcgatc aggagcgacg ggcctgcgcc tcccgcctga
     1621 ctagattctg gattttcgcc ggacgtcagc tcgccgacca gatccgttcg accagtgcgt
     1681 gcgaacaggc gactagaacc caaaccgtgg ctcgcaccaa gatgtcacag atccgttcat
     1741 cagccccttc cccgcatccc gcggctaact gggcggaaag acgctggcgc ctccaggtgc
     1801 ggttcgcggc agatgaggac gtttcagagc agcggggtgc cgacgatctc gatgccaccg
     1861 tcctgctcgg cgcttgccgc cgatcatcca tcgacctgaa gagctcctgc actgatctag
     1921 gcacgaccgc gcgcactcag gcaggatgca accgaaccca ccctctcgtg agtcgtcttt
     1981 gtgaagcgag ggaggtgccg cgtgagcgac atcgagatcc aggaactgta cgccacgtcg
     2041 taccggcgcc tgctcggaca gctcatcggc gtcaccggca acgtggccga ggccgaggac
     2101 gtcgtccagg aggcgttcgt acgtgggttg gaccatccca ggcggctgct cggcgccgac
     2161 aatccggagg cgtggctgcg cacggtcgcg gtcaacctcg cccggagtcg gtggcggcgg
     2221 gcacagcgtc tggtcggcct cgccccgcgg ctggtggacg cgccccggga gagcgactcg
     2281 gatggccaca tcgtgctgct ccaagcgctc cgcgcccttc cagccggcca acgggaggcg
     2341 atcgcgctgc accacctggc a
//
LOCUS       DASSYW010000132         6414 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_549566, whole genome shotgun sequence.
ACCESSION   DASSYW010000132 DASSYW010000000
VERSION     DASSYW010000132.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 6414)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6414)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6414
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_549566"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..189
                     /locus_tag="VFN38_02085"
     CDS             <1..189
                     /locus_tag="VFN38_02085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010569.1"
                     /translation="AKQLGISYAAARVRVHRLRGRFRTLVLQHVASLEPKEKREVERF
                     LRRAGLCLESRLERGRKG"
     gene            186..878
                     /locus_tag="VFN38_02090"
     CDS             186..878
                     /locus_tag="VFN38_02090"
                     /inference="COORDINATES: protein motif:HMM:NF012920.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S24 family peptidase"
                     /protein_id="HET9010570.1"
                     /translation="MTQFDDDAVDELMRLVGAEIERRDDALVHQGEAQLTWIAQDLRA
                     GASAADRLRDEHDADEFARRAIARRTIRRAEDRLPKLRLRDRPAPMTATVSQAMPLAL
                     EHRCAVLLELAAAAGAGRELWDEPCDTWVELPADAHAERYVALRVDGDSMEPVLAPRD
                     VILVQLDATPVVDDLVVARRPDEGFVVKRVASLTSQQIELASFNEAYAPVMVRRDPSA
                     VLGTVIARFSRR"
     gene            complement(891..1232)
                     /locus_tag="VFN38_02095"
     CDS             complement(891..1232)
                     /locus_tag="VFN38_02095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010571.1"
                     /translation="MPPAPAPGIEQEFRGAYTRGFEASWFAPCDAPRDDALWWVTLTE
                     EARLQRDSMLKALTVPATGALVVRWRGTISNRMPAGQMGRGTRYLLVARIVELRPLPS
                     GGACGAAGRTI"
     gene            1437..1739
                     /locus_tag="VFN38_02100"
     CDS             1437..1739
                     /locus_tag="VFN38_02100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010572.1"
                     /translation="MRSCTDRTGMRWEVFEVHPGADGRTVERMPEVFRTGWLCFQSAT
                     ERRRLAPIPRGWQDWDDHALLGALDHGHRSARRTPPEFRLPPYMSGSHERQPPRGR"
     gene            complement(1736..3040)
                     /locus_tag="VFN38_02105"
     CDS             complement(1736..3040)
                     /locus_tag="VFN38_02105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HET9010573.1"
                     /translation="MSERVTRPDARRLKSIVGGSAGNLVEWYDWYVYSAFALYFAKSF
                     FPPASQTAQLLNSAAVFALGFLMRPVGGWLMGRYADRRGRRAALSLSVLLMCAGSLLI
                     AITPGFAAIGVAAPLLLVFARLLQGLSVGGEYGASATYLSEMAGRQLRGFYSSFQYVT
                     LIGGQLIALGVLLVLQRTLSVDALEEWGWRIPFAIGGALAVAALWLRRGLDETSSFEV
                     ARAAQAASPAVMRAPLRELMGYPREIATVVGLTAGGTVAFYTFTTYAQKFLANTAGFS
                     RAAATEMSAATLLLFMLAQPLVGYLSDRVGRRPVLMTFGVLGTLGTVPLLTALGAART
                     EGRAFVLLMAALLAVSGYTAINAVVKAELFPTSIRALGVALPYAVAVSVFGGTAEYLA
                     LWAKSIGHERWFYWYVTACIAASLAVYATMPETRTASRILED"
     gene            complement(3037..3846)
                     /locus_tag="VFN38_02110"
     CDS             complement(3037..3846)
                     /locus_tag="VFN38_02110"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HET9010574.1"
                     /translation="MELLSVWDEIDGLRIHGRVSAPSGQRAVEPPIVFVHGLGVSTRY
                     MEPTMTRLARTHTVVGLDLAGFGRSATPPRPFGVAEHARIVARWLDARGIGPAILVGN
                     SYGCQVIVDCVARWPDRAVGLVLNAPTMDPAHRSAIVMLARVLADVPREPWRLAVIVA
                     RDYLRAGPRRILATLAEALRDRIEEKLPALSHPVLVVCGARDPVITARWASECARLVG
                     IERPGAAGGVMQCVATAAHALPYDDPSTFADIITNFARHGVRKAPTPAAHA"
     gene            complement(3857..4891)
                     /locus_tag="VFN38_02115"
     CDS             complement(3857..4891)
                     /locus_tag="VFN38_02115"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF006078.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003910 - DNA ligase (ATP) activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA ligase"
                     /protein_id="HET9010575.1"
                     /translation="MTLPIPRTYAPMEAKLVDELPVGGEWQYEPKWDGFRCLAFRDGD
                     TVDLMSKAGKPLARYFPELVDTLRAVKAQRFVLDGEIVIPHDGSLSFDELLLRIHPAK
                     SRIAKLSVESPATLIVFDLLVDAKGASLVKLPLAERRAALEKFVAANVPKKLAIHLSP
                     AATSMVTVKKWFRSVGGGLDGVVAKRLDLAYQSGTRDGMQKMKHMRTAECVVGGFRYA
                     SKGKVMGSLLLGLYDAGGLLHHVGFTSNVPTADKPAITKKLEKLKRAPGFTGQAPGGP
                     SRWSTERSSQWEPLAPELVVEVQYDHFSGGRFRHGTSFLRCRPDKPPTRCTIDQVEQE
                     GRSAIKLLPK"
     gene            complement(4888..5829)
                     /gene="ligD"
                     /locus_tag="VFN38_02120"
     CDS             complement(4888..5829)
                     /gene="ligD"
                     /locus_tag="VFN38_02120"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF045432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-homologous end-joining DNA ligase"
                     /protein_id="HET9010576.1"
                     /translation="MAPRRARNIPTTETTAELTIGGRRVRLTNLDKLFWPGAGITKRQ
                     LLQYYADVSPWLLPHLRDRAMVMKRYPNGATGKCFFMKRVPEPHPEWLETCTIDHKSG
                     NVIDFPVVNDLASLLWVVNLGCIDLNQWYARCDDVDRPDYLHFDLDPVKKGGVTFRKV
                     LDAGLVVRDALEALGMTPLIKTTGSAGAHLYVPIVRGPTQKQVWTFAKALAQALAAKH
                     PKPLTAEYRIAERPKGRVLVDYNQNAWGRTLASIYSPRPRPRASVSTPLTWKEVERGV
                     KIEDFRIDNVPARLRKLGDLWKPLLEKRGRFDLATVL"
     gene            complement(5922..6314)
                     /locus_tag="VFN38_02125"
     CDS             complement(5922..6314)
                     /locus_tag="VFN38_02125"
                     /inference="COORDINATES: protein motif:HMM:NF013869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MscL family protein"
                     /protein_id="HET9010577.1"
                     /translation="MWREFKAFLITANVFALAIAVVIGAALAKVVSALVADFIMPIVA
                     FAVPGGDWRSATWNVGPVKFLVGDFAGALIDFLIIGFIVWRLSKIFIKTQAPAPVRTC
                     PYCRMPIDEAATRCPHCTSDLTLVRTPQ"
BASE COUNT         1060 a         2089 c         2329 g          936 t
ORIGIN      
        1 gcgaagcagc tgggaatcag ctacgccgcg gcgcgggttc gcgtgcaccg gcttcgtgga
       61 cggtttcgga ctctggtgct gcagcacgtc gcctcgctgg agccgaagga gaagcgcgaa
      121 gtcgagcgct tcctgcggcg agcggggctc tgtctcgaat cgcgcctgga gcgcgggagg
      181 aagggatgac gcagtttgac gacgacgccg tcgacgagct gatgcgcctc gtgggcgcgg
      241 agatcgaacg gcgggacgac gcgctcgtcc atcagggcga ggcgcagctg acgtggatcg
      301 cacaggacct gcgcgccggc gcgagcgcgg ccgaccgact gcgcgacgag cacgacgccg
      361 acgagtttgc gcgaagggcg atcgcacgtc gcaccatccg tcgggcagag gatcgtctgc
      421 cgaagcttcg gttgcgcgac cgccccgcgc cgatgacggc gacggtctcc caggcgatgc
      481 cgctcgcgct ggagcaccgc tgcgccgtgc tgctggagct cgcggcggcg gcgggagcgg
      541 ggcgtgagct gtgggacgag ccgtgcgaca cgtgggtgga gctgccggcc gacgcacatg
      601 cggaacgcta cgtcgcgctg cgggtggatg gggacagcat ggaaccggtg ctcgcgccgc
      661 gggacgtcat cctcgtccag ctcgatgcga cgccggtggt cgacgatctc gtcgtggcgc
      721 gacgacccga cgaaggattc gtcgtgaagc gcgtcgcctc gctgacgtcg cagcagatcg
      781 agctggcgtc gttcaacgaa gcgtacgcac cggtgatggt ccgtcgggat ccgtcggccg
      841 tgctgggcac cgtgatcgcg cggttcagtc gccgctgacg tcgcgcgcca tcagatcgtc
      901 cgtccggcgg ctccgcaggc gccgccggac ggcagcggcc gcagctccac gatgcgggcc
      961 acgagcaggt agcgcgtgcc gcgacccatc tgcccggccg gcatgcggtt gctgatggtg
     1021 ccacgccagc gaacgacgag cgcgccggtg gccggcaccg tcagcgcctt cagcatgctg
     1081 tcgcgctgga ggcgcgcctc ctccgtgagc gtcacccacc acagcgcgtc gtccctcggc
     1141 gcatcgcacg gcgcgaacca gcttgcttcg aagccgcgcg tataggcgcc gcgaaactcc
     1201 tgctcgattc cgggcgcggg cgcgggcggc acctgctggg gaagcggcgc cgtggccgtg
     1261 ttcggggcct ccggcgtcgc gctgggcgca ggagcgggtg cgtccgccgg cgccgatgcg
     1321 cgcgcgcacg cgaggaatgt gacgcacgct accagactga ggaatggacg atgcatatac
     1381 tctcctgggc gagcagacca cgtgccggat gagcatacac cgaccaggcc atgacgatgc
     1441 gcagctgtac cgaccgcacg gggatgcgct gggaggtgtt cgaagtgcac cctggcgccg
     1501 acggacgcac ggtggagcgg atgccagagg tattccgcac gggatggctg tgcttccagt
     1561 cggccacgga acgccgccgc ctcgccccga tcccccgcgg ctggcaggac tgggatgacc
     1621 atgccctcct cggcgcgctc gatcatggac atcgctcggc ccgacgcacc cctccggagt
     1681 tccggttgcc accctacatg agcggcagtc acgagcgcca gccgcctcgc gggcgctagt
     1741 cctcgaggat gcgggacgcc gttcgcgttt ctggcatcgt ggcgtacacg gcgagcgagg
     1801 cggcgatgca ggcggtgacg taccagtaga accagcgctc gtgcccgatg ctcttggccc
     1861 agagcgcgag gtactcggcg gtgccaccga ataccgagac ggcgacggcg tacggcagcg
     1921 cgacgccgag tgcgcgaatg ctcgttggaa agagctcggc cttcaccact gcgttgatgg
     1981 cggtatagcc gctcaccgcg aggagcgccg ccatgagcag cacgaaggct cggccttcgg
     2041 tgcgggcggc gccgagcgcg gtgaggagcg gcaccgtgcc gagcgtgcca agcacgccga
     2101 aggtcatcag caccggtcgc cggcccacgc gatcggacag gtagcccacc agaggctgcg
     2161 cgagcatgaa cagcagcagc gtggccgcgg acatctcggt cgccgccgcc ctggagaatc
     2221 ccgcggtgtt ggccaggaac ttctgcgcgt acgtcgtgaa ggtgtagaac gccaccgtgc
     2281 cgccggcggt gaggccgacg acggtggcga tctcgcgcgg ataccccatc agctcgcgaa
     2341 gtggtgcgcg catcaccgcg ggtgacgctg cctgcgcggc gcgtgcgacc tcgaacgacg
     2401 acgtctcgtc gagcccgcgc cgcagccaca gcgccgcgac ggccagcgct ccgccgatcg
     2461 cgaagggaat gcgccacccc cactcttcca gcgcgtcgac cgacagcgtg cgttggagca
     2521 cgagcagcac gccgagcgcg atcagctggc cgccgatgag cgtgacgtat tggaagctcg
     2581 agtagaagcc gcgcagctgg cggccggcca tctcgctgag gtaggtcgcg ctggcaccgt
     2641 actccccgcc cacgctcagt ccctggagca gccgtgcgaa caccagcagc agtggagcgg
     2701 cgacaccgat cgccgcgaag ccgggcgtga tggcgatgag cagcgagccg gcgcacatga
     2761 gcagcaccga gaggctcagc gccgcgcgcc ggccacggcg atcggcgtac cggcccatga
     2821 gccatccgcc caccgggcgc atgagaaagc ccagcgcgaa gaccgccgcc gaattgagga
     2881 gctgcgccgt ctgactggcc ggcgggaaga acgacttcgc gaagtacagc gcgaacgcgg
     2941 agtagacgta ccagtcgtac cactccacga gattgccggc cgagccgccg acgatggact
     3001 tgagccgccg ggcgtcgggg cgagtgacgc gctcgctcac gcgtgcgccg ccggcgtggg
     3061 cgccttccgt acgccgtgcc gagcgaagtt ggtgatgatg tcggcgaagg tggagggatc
     3121 gtcgtacggc agcgcgtgcg cggcggtggc cacgcactgc atgacgcccc cggcggctcc
     3181 gggtcgctcg atgccgacga gacgtgcaca ctcgctcgcc cagcgcgcgg tgatcaccgg
     3241 atcacgggcc ccacacacga cgagcaccgg gtgcgacagc gcgggaagct tctcctcgat
     3301 gcgatcgcgg agcgcttcgg ccagcgtggc gaggatgcgg cgcggaccgg cacgcaggta
     3361 gtcccgcgca acgatgacgg cgagacgcca gggctcccgc ggcacgtccg caagaacgcg
     3421 ggcgagcatg acgatcgcgc ttcggtgcgc gggatccatc gtcggtgcgt tgagcaccag
     3481 gcccaccgcg cggtccggcc accgtgccac gcagtcgacg atcacctggc agccgtacga
     3541 gttgccgacg aggatggcgg ggccgattcc ccgcgcgtcg agccaccgcg caacaatgcg
     3601 cgcatgctcc gcaacgccga acggacgtgg tggcgtggcg ctgcggccga agccggcgag
     3661 atccaatccg acgacggtat gcgtccgggc gagccgcgtc atcgtcggct ccatgtaccg
     3721 cgtggagacg ccgagtccat gcacgaaaac gatcggtggc tcgacggccc gttggcccga
     3781 tggcgcggaa acgcgaccat ggatgcgcag accatcgatc tcgtcccaca ccgaaagcag
     3841 ttccatggac tggaagctac ttcggcaaca gcttgatggc cgaacggccc tcctgctcca
     3901 cctggtcgat ggtgcagcgc gtgggaggct tgtcgggacg gcagcgaaga aacgatgtgc
     3961 cgtgccggaa acgtccgccc gagaagtggt cgtactgcac ttcgacgacg agctccgggg
     4021 cgagcggttc ccactggctg gaacgctcgg tgctccagcg gctcggacct ccgggcgcct
     4081 gtccggtgaa gccgggggcg cgtttcagtt tctcgagctt cttcgtgatg gcgggcttgt
     4141 cggcggtggg gacgttcgag gtaaagccca cgtgatgcag caggccgccg gcgtcgtaca
     4201 gcccgagcag cagcgagccc atgaccttcc ccttggatgc gtagcgaaag ccgccgacga
     4261 cgcattcggc cgtgcgcatg tgcttcatct tctgcatgcc gtcgcgcgtt ccgctctggt
     4321 aggcgaggtc gagccgcttg gcgacgacgc cgtcgagtcc tccgccgacg gaccggaacc
     4381 acttcttcac cgtgaccatg ctggtcgccg ccggggagag gtggatcgcg agcttcttcg
     4441 gcacgttcgc ggcgacgaac ttctcgagcg ccgcgcggcg ttccgcgagc gggagcttca
     4501 cgagcgaggc gcccttcgcg tcgaccagga gatcgaagac gatgagcgtg gccggactct
     4561 cgacggaaag cttcgcgatg cggctcttcg caggatggat gcgaaggagc agctcgtcga
     4621 acgagagcga gccgtcgtgc gggatgacga tctcgccgtc gagcacgaag cgttgcgcct
     4681 tcacggcgcg cagcgtgtcg accagctcgg ggaagtagcg cgcgagcggc tttccggcct
     4741 tcgacatgag atcgaccgtg tcgccgtcgc gaaaggcgag gcagcggaag ccgtcccatt
     4801 tgggctcgta ctgccattcg ccgccgacgg gcagctcgtc gacgagcttc gcctccatcg
     4861 gcgcatacgt gcgcgggatc ggcagcgtca taggaccgtc gccagatcga agcggccgcg
     4921 cttctcgagc aggggcttcc agagatcgcc gagctttcgc aaccgcgccg gcacgttgtc
     4981 gatgcgaaag tcctcgatct tcacgccgcg ctccacctcc ttccaggtca gcggggtgga
     5041 gacggacgct cggggcctgg gtcgcggtga gtagatggag gcgagggtgc ggccccaggc
     5101 gttctggttg tagtccacca gcactcgccc cttcgggcgc tccgcgatgc gatactcggc
     5161 ggtgaggggc ttcggatgct tcgcggcgag ggcctgggcg agcgccttgg cgaacgtcca
     5221 cacctgcttc tgcgtcgggc cgcgcacgat cgggacatag aggtgtgcgc cggcggagcc
     5281 ggtggtcttg atcagcggcg tcatgccgag ggcctcgaga gcgtcgcgga cgacgagccc
     5341 ggcgtcgagc accttccgga aggtgacccc ccccttcttg accggatcga gatcgaagtg
     5401 gaggtagtcg gggcgatcga cgtcgtcgca gcgggcgtac cactggttga ggtcgatgca
     5461 gccgaggttg acgacccaga ggagcgacgc gaggtcgttg acgaccggaa agtcgatgac
     5521 gttccccgac ttgtggtcga tggtgcaggt ctccagccac tcggggtgcg gctccggcac
     5581 gcgcttcatg aagaagcact tccccgtggc gccgttgggg tagcgcttca tgaccatcgc
     5641 gcggtcgcgg agatggggga gcagccaggg cgagacgtcg gcgtagtact ggagcagctg
     5701 acgcttggtg atgccggcac cgggccagaa cagcttgtcg aggttggtca gcctgacgcg
     5761 ccggcccccg atggtgagct ccgccgtcgt ttcggtcgtg gggatgttgc gcgcgcgccg
     5821 gggagccatg gtggctgccg ggggcaaaac ggaggcccgc aggcctgcgg cgctgaaggc
     5881 cagccgaccc agtccaggca acaatatcta tttatgtatt tctactgagg cgttcggacc
     5941 agggtcagat cgctcgtgca gtgtggacac cgcgttgcgg cctcgtcgat cggcatgcgg
     6001 cagtacgggc aggtgcgcac gggcgccggt gcctgggtct tgatgaagat cttgctgagg
     6061 cgccagacga tgaacccgat gatcaggaag tcgatcaggg cccccgcgaa atcgccgacg
     6121 aggaacttca ccgggcccac gttccaggtc gcactgcgcc agtcgccgcc gggcaccgcg
     6181 aaggcgacga tgggcatgat gaagtcggcg acgagcgccg aaaccacctt ggccagcgcg
     6241 gcgccgatga cgacggcgat ggcgagcgcg aacacgttcg ccgtgatgag gaacgccttg
     6301 aactcacgcc acattgggga gctccgggaa tacgggggga cggcaggacg ggggaacaag
     6361 aacatggagc aagcagcggc attccgtcag gcccggggtt caggaatgcg agtt
//
LOCUS       DASSYW010000133         2143 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_660072, whole genome shotgun sequence.
ACCESSION   DASSYW010000133 DASSYW010000000
VERSION     DASSYW010000133.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2143)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2143)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2143
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_660072"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1407)
                     /locus_tag="VFN38_02130"
     CDS             complement(<1..1407)
                     /locus_tag="VFN38_02130"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HET9010578.1"
                     /translation="MTNPFSFTGRALRLAAVLALVPAALAAQADPGTLSGRVMAADAP
                     VVGATVLAAGRAASTRADGSYRLTLPAGRYLVRVRAIGFNTVSDSVVIRSGGITTANY
                     SLTRAIATLEAVSTLGTRGEARTVIDAPVPIDVLSSAEIKATGRTETAQMIQAVAPSF
                     NFPRTSIGDGTDHVRPATLRGLAPDQTLVLVNGTRRHNSALVNVNGFVGRGSAPVDLN
                     AIPSSMIDHIEILRDGAAAQYGSDAIAGVVNIVLKQGTAGELRTTLGQSYSTFNKPDD
                     VNVTPYPVQVGERNARDGKVFQGALDHGWAFGQSGFLHLAAELRERGQTNRSLADPRI
                     QYAAGDPRETNPALPSPDGRLNHRQGDGSMHDVQGFWNGATTLSNGLDVYTFGGLGTR
                     TGEATGFWRRPLDDRTLRNIYPNGFLPIIHSDIYDASGAVGLKGVASGWNWDLGTVYG
                     QNQFGFVIKNTANVSLGPT"
     gene            complement(1575..>2143)
                     /locus_tag="VFN38_02135"
     CDS             complement(1575..>2143)
                     /locus_tag="VFN38_02135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010579.1"
                     /translation="PTLRRDEAFETALRMRERAIAPALFAPARAWYRSEHVAGELPQG
                     VRYSVSAVPIASPDGDTWFRLVNNAAVGFENVQQVFGVDPSVAVGDWSASHAVDDVST
                     LIADQFKQKSWNWHSLYGALCSAGTGCPYPLPVRTMVAGTTYTGTVRPGGSTHFKLAV
                     AAGGTATVTLNSASANASSLRLLIVRTK"
BASE COUNT          306 a          725 c          788 g          324 t
ORIGIN      
        1 cgtgggtccg agcgacacgt tcgccgtgtt cttgatgacg aagccgaact ggttctggcc
       61 gtagacggtg ccgaggtccc agttccagcc gctggcgacg cccttcagcc ccaccgcgcc
      121 cgacgcgtcg tagatgtcgg agtggatgat ggggagaaac ccgttcgggt agatgttgcg
      181 cagcgtgcgg tcgtcgagcg ggcggcgcca gaagccggtg gcctcgcccg ttcgcgtgcc
      241 gaggccgccg aaggtataga cgtcgaggcc attgctcagc gtggtcgcgc cgttccagaa
      301 gccctgcacg tcgtgcatcg agccgtcgcc ctgacggtgg ttcaagcgcc cgtcggggct
      361 tggcagcgcg gggttcgtct cgcgcggatc acccgccgcg tactggatgc gcggatccgc
      421 caggctgcgg ttggtctgcc cacgctcccg gagctctgcc gcgaggtgca ggaagccgct
      481 ctgaccgaag gcccagccgt ggtcgagcgc gccctggaac accttgccgt cgcgcgcatt
      541 cctttcgccg acctgcaccg ggtagggggt gacgttgacg tcgtcgggct tgttgaaggt
      601 cgaatagctc tgtccgagcg tcgtgcggag ctcgccggcc gtcccctgct tcagcacgat
      661 gttgacgacg ccggcgatcg cgtcggagcc gtattgcgcc gccgcgccgt cgcgcaggat
      721 ctcgatgtgg tcgatcatgc tcgacgggat cgcgttgaga tccaccggcg ccgagccgcg
      781 gccgacgaat ccgttcacgt tcaccagcgc gctgttgtgc cggcgcgtgc cgttcacgag
      841 gaccagcgtc tgatcgggcg ccagcccgcg cagcgtggcg gggcgcacgt ggtccgtgcc
      901 gtcgccgatc gaggtgcgcg ggaagttgaa gctcggggcg acggcctgga tcatctgcgc
      961 cgtctccgtg cggccggtcg ccttgatctc ggcggacgac aggacgtcga tcggcaccgg
     1021 cgcgtcgatc accgtgcgcg cttcgccgcg cgtgccgagg gtggacaccg cctcgagcgt
     1081 cgcaatagcg cgggtgagcg aatagttggc cgtcgtgatg ccgccgctcc ggatgaccac
     1141 cgagtcgctg acggtgttga agccgatcgc gcgcacgcgc acgaggtagc ggccggccgg
     1201 aagcgtgagc cgatagctgc cgtcggcgcg tgtggacgcc gcgcgcccgg cggcgagcac
     1261 cgtcgcgccc acgacgggcg cgtccgccgc catcacgcgg ccggagagcg taccagggtc
     1321 ggcctgggcc gccaaggcgg cggggacgag ggccaggaca gcggccaggc gcagtgcccg
     1381 gccggtaaac gagaacggat tcgtcatgca gcgactctcc gaagggggga ccgacagggg
     1441 aaacgggagc gcgtccgtgg ggaggaccgc gctacgttat cccccgccgg cgacgacggc
     1501 cagagggatg aatgcaggac ggggccggcg agttcgccgg ccccgtcccc tgcacatcga
     1561 gtcgtgcagt ggcgctactt cgtccgcacg atcagcagtc gcagcgacga cgcattggcc
     1621 gaggcgctgt tgagcgtcac cgtcgccgtg ccgccggccg cgaccgcgag cttgaagtgg
     1681 gtggagccgc cggggcggac cgtccccgtg tacgtcgtgc cggcgaccat cgtgcgcacc
     1741 gggagcggat acggacatcc cgtgccggcc gagcagagcg cgccgtagag gctgtgccag
     1801 ttccagctct tctgcttgaa ctgatccgcg atcagtgtcg agacgtcgtc cacggcgtgc
     1861 gaggccgacc agtcgcccac ggcgacgctc gggtcgacgc cgaacacctg ctgcacgttc
     1921 tcgaagccga ccgccgcgtt gttcacgagc cggaaccagg tgtcgccgtc gggcgaggcg
     1981 atgggcaccg cgctgaccga ataccggact ccctgcggca gctcgccggc cacgtgctcg
     2041 ctccgatacc atgcccgtgc gggcgcgaac agcgcgggcg cgatcgcgcg ctcgcgcatg
     2101 cgcagcgccg tctcgaaggc ctcgtcgcga cgcagcgtcg gtg
//
LOCUS       DASSYW010000134         2751 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1065525, whole genome shotgun sequence.
ACCESSION   DASSYW010000134 DASSYW010000000
VERSION     DASSYW010000134.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2751)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2751)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2751
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1065525"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..235
                     /locus_tag="VFN38_02140"
     CDS             <1..235
                     /locus_tag="VFN38_02140"
                     /inference="COORDINATES: protein motif:HMM:NF044773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010580.1"
                     /translation="AEIEVDEFDVDKGDLISCPDCGSNLEVTGIAPVELEAVDEDEDD
                     DEDEDDDNGDDDDEFDDVDDVDEDDDTSGEDYE"
     gene            198..1043
                     /gene="larE"
                     /locus_tag="VFN38_02145"
     CDS             198..1043
                     /gene="larE"
                     /locus_tag="VFN38_02145"
                     /inference="COORDINATES: protein motif:HMM:TIGR00268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent sacrificial sulfur transferase
                     LarE"
                     /protein_id="HET9010581.1"
                     /translation="MKTTTPAERTTSSAKEAALDETLRDFPSVIVAYSGGVDSAFLAY
                     AAHRALGPNALAVTADSPSYPERHRQIALRLAREFGFAHLVIQTAEMSRPEYRANHAD
                     RCYHCKHELYTHLSAIARDRGIPVVVDGANADDRGDYRPGRQAAREFGVRSPLDEVGL
                     TKDEIRDLSRRAGQPTWDEPASACLSSRIPYFSEVTDEKLRMIERAENVLRGLGFRIC
                     RVRHHDTIARLELGRDEIARALEPELSATIDRELRAIGYAHVTVDLRGYRLGSLNEAL
                     RLRVI"
     gene            1239..>2751
                     /locus_tag="VFN38_02150"
     CDS             1239..>2751
                     /locus_tag="VFN38_02150"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF022481.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HET9010582.1"
                     /translation="MLSAAGVASPEPRGLAIWSAASGALMLFPLFRLFAALDRSRQRA
                     WWATLLVALSPLFWFTALRPLSDMTGLAAAVLAQALTLSAIAERTRARPLVWAAFIAG
                     LAIGIRSQTALLTLPLLALALVWRPLALSMRDRTVVVVAAAAGMLVWAVPLIAASGGP
                     SAYAAALGTQAGEDFSGVVMLWNMRQARVAADALIYSFAWPWGAPVAGAIVLAVAALG
                     LVRAAVKSPRVLALILLAFGPYAVFHLLFHEVVTTRYALPLVVPAAFFVVQALDLAGG
                     RAVAAGASALGVWSLSITIPAMVLFGGAGSPTFRAFQDVIQAAGDDRAHPRVIAMHAV
                     MRRAADWMGTNSRIRMVKAFHGREWLALVEVWRSAPEAVVSYIADPRRTDLALIDPAS
                     RRGPSRYRWPFVEAPFVGGARPGDADVYAMRAPGWMLDRGWALTAEVAGVTARDGWGP
                     HLQPSVAWVRARPDAATLILGGRHLVDGAAPVRIAVVLDGATLDSFETGPGYFF"
BASE COUNT          371 a          946 c          963 g          471 t
ORIGIN      
        1 tgcggagatc gaggtcgacg agttcgatgt cgacaagggc gatctgatta gttgcccgga
       61 ctgcggctcg aacctcgaag tgaccggcat cgcacccgtc gaactcgaag ccgtcgacga
      121 agacgaggac gacgatgaag acgaggacga cgacaacggc gacgatgatg atgaattcga
      181 cgacgtcgac gacgtcgatg aagacgacga caccagcgga gaggactacg agtagtgcca
      241 aggaggcggc gctcgacgag acgctgcgcg atttcccctc ggtaatcgtc gcctacagcg
      301 gcggggtcga cagcgctttc ctcgcctacg ccgcgcaccg cgcgcttggt ccgaacgccc
      361 tcgccgtcac cgcggacagc ccgagttacc ctgaacgcca ccgtcagatt gcgctgcgcc
      421 tcgcccgcga gttcgggttc gcacacctcg tgatccagac cgccgagatg tcgcgcccgg
      481 aatatcgcgc caatcacgcg gaccgctgtt accactgcaa gcacgagctg tacacgcacc
      541 tctcggccat cgcgcgcgac cgcggcattc ccgtcgtcgt cgacggcgcg aatgcggacg
      601 accgcggcga ctaccgaccc gggcggcagg cggcgcgcga gttcggcgtg cgcagcccgc
      661 tcgacgaagt cgggctgacg aaggatgaga tccgcgacct gtcgcggcgc gccggacagc
      721 cgacgtggga cgagccggcg tcggcctgcc tgtcgtcgcg tattccctac ttcagcgaag
      781 tcaccgacga gaagctgcgg atgatcgagc gggcggagaa cgtgctgcgc ggtctcggct
      841 tccgcatctg ccgcgtgcgg catcacgaca cgatcgcgcg cctcgagctc ggacgcgacg
      901 agatcgcgcg ggcgctggag ccggagctgt ccgcgaccat cgaccgcgag ctgcgcgcga
      961 tcggctacgc gcacgtgacc gtcgacctgc gcggctaccg gctcgggagc ctgaacgagg
     1021 ccctgcggct gcgcgtcatc tgagttcgct tgcgcagagc catcgcgccg ctcgcgctcc
     1081 tctttctggc cgcgcacctt cccttcctgc cgcccacgct cgaggatctc gattcgatca
     1141 atttcgcgct cggcgtccgg cacttcgatg tcgccaggca ccagccgcat ccgcccggtt
     1201 acccggtgtt cattgcgctg ggcaaagcgt ccacggccgt gctcagcgct gccggcgtcg
     1261 cgtcgcccga gcctcgcggc ctggcgatct ggagtgcggc gagcggcgca ctcatgctct
     1321 ttccgctgtt ccgcctgttt gccgcgctcg atcgatcccg acagcgggca tggtgggcga
     1381 cgctcctggt cgcgctctcg ccgttgttct ggttcacggc gctgcggccg ctgagcgaca
     1441 tgaccgggct ggccgcggcg gtgctggcgc aggcgctcac gctgtcagcc atcgcggagc
     1501 gcacccgggc gcggccgctc gtctgggccg cattcattgc ggggttggcc atcggaatcc
     1561 gatcgcagac cgccctgctg acgctgccgc ttttggccct cgcactcgtg tggcgcccgc
     1621 tcgcactgtc catgcgcgat cgaacagttg tcgtcgtcgc cgccgccgcc ggcatgctcg
     1681 tctgggcggt tcccctcatc gccgcgagcg gcggcccgtc ggcatacgcg gcggctctgg
     1741 gaacgcaggc cggggaagat ttctccggcg tggtgatgtt gtggaacatg cgccaggcgc
     1801 gcgtggcggc cgatgccttg atctattcgt ttgcgtggcc ctggggcgcc ccggtggccg
     1861 gcgcgatcgt gctcgccgtt gcggcgctgg gattggtccg cgccgccgtc aaatcaccgc
     1921 gcgtgctcgc gctgatcctg ctggccttcg ggccgtacgc ggtctttcat ctgctgttcc
     1981 acgaggtcgt caccacacgc tatgcgctgc cgctcgtggt gccggccgcg ttcttcgtcg
     2041 tgcaggcgct cgacctggcc ggcggtcgcg cggtggccgc gggtgcatcc gcgctcggcg
     2101 tctggtcgct gtcgatcacg attccggcga tggttctgtt cggcggcgcc ggcagtccga
     2161 cgttcagggc ctttcaggac gtcatccagg cggcgggcga cgatcgcgcg catccacggg
     2221 tgatcgcgat gcacgccgtg atgcggcgcg cggcagactg gatgggcacg aattcacgca
     2281 tccggatggt caaggcgttc cacgggcgcg agtggctggc gctggtggag gtgtggcgtt
     2341 ccgccccgga ggcagtggtc tcgtacattg ccgatccgcg gcgcaccgac ctggcgctga
     2401 tcgatcccgc ctcgcgccgt ggaccgtcgc ggtaccggtg gccgttcgta gaggcgccgt
     2461 tcgtcggcgg cgcgagaccc ggggatgccg acgtgtacgc gatgcgcgct cccggatgga
     2521 tgctcgatcg cgggtgggcg ctgacggccg aagtcgcggg cgtcaccgcc agagacggtt
     2581 ggggaccgca cctgcagccg agcgtggcct gggtgcgcgc gcggcccgat gcggcgaccc
     2641 tcatcctcgg cggccggcat ctggtcgacg gtgcggcgcc cgttcggatc gcggtcgtgc
     2701 tggacggagc aacgctggac tcgttcgaga ccggtcccgg atacttcttc c
//
LOCUS       DASSYW010000135         3568 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1673087, whole genome shotgun sequence.
ACCESSION   DASSYW010000135 DASSYW010000000
VERSION     DASSYW010000135.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3568)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3568)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3568
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1673087"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            70..2898
                     /locus_tag="VFN38_02155"
     CDS             70..2898
                     /locus_tag="VFN38_02155"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HET9010583.1"
                     /translation="MPETSIRRPLSIALLVVAGLALSTAQPTTQARRTSDIPQLTFEK
                     VTLPNGLEVILSPKRGLPMVAVNLWYHVGPANEAAGRTGFAHLFEHMMFQSSLHVPED
                     SHFKLLEAAGASDINGTTDYDRTNYFQTVPTNQLELALWLESDRMGYLLEKVTQASLS
                     NQQDVVRNERRQSVENQPYGMADEAAVQILFPKGHPYYGNVIGSHEDIQAVKLEDVHS
                     FFRQYYAPNNASLAIVGDFDVAQAKALVTKYFGTFKRGPAVPPAKADTPKITSERRQT
                     VQARVQLPRVTMAWITPPIFQAGDADADVAAQVLGGGRSSRLYKKLVYEKQIAQNVVA
                     QQYSLILGSMFQVEATARPGHTAEELEKAIDEELAAFRANPPTAEELERARNTIETNI
                     IGGLERLGGFGGIADRLNSYNHYLKNPGFLEQDIQRYRAVTPASVLAFANANLAPNAR
                     GIIYAVPGTPAAPPNPATPPAPSAAAGQKPGPSINADEPWRNTQPKPGAAKPLQLATP
                     TTATLPNGLTLILSEKHEVPIVAASLVFRGGSDSNPADKPGLANFTAAMLDEGTSTRN
                     ALAIADELARLGATLGTGSSMDSMTVSARSLAKNFPAALDLVADVTLRPSFPADEIDR
                     QRAQRLGQLVQQRDNPAALVGTVAMQAAYGTRHPYGFAEIGTEASVKAISRTDMQAFW
                     KDRFVPNNAALVVAGDITMPELRALAEKAFGAWERGSASRPQLGAPQMTEARVVIVDK
                     PASPQTQLRVVGIGAERSSPDFRPLQVMNMTLGGLFSSRINMNLREAHGYTYGASSQF
                     TFRRAPGPFQVAAGIRTDVTAPAVAEVFKEILSMAQKPMTADELQRAKDSMSYSLPGA
                     FESSANAVGNFSNVFVYDLGLDYYSRYAAQVNAVTVEQAAAVARKYLVSEKMVVIAVG
                     DRSKIEVPLRELGLGPVEIWDADGKKVN"
     gene            3020..>3568
                     /locus_tag="VFN38_02160"
     CDS             3020..>3568
                     /locus_tag="VFN38_02160"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent cysteine synthase family protein"
                     /protein_id="HET9010584.1"
                     /translation="MAEVTPGQSPSVSSVVDLIGNTPLIRLSSFEAGLRNVELYAKAE
                     WRNPGGSVKDRAAARMIADGEKSGALTRDKILLDATSGNTGIAYAMIGAARGYRVRLC
                     VPENVTPERKRILKAFGAEVVFTDPMEGSDGAIIKAKAMYAEHPDLYFYPDQYNNPGN
                     WRAHYDTTAPEILEQTRGRITHF"
BASE COUNT          631 a         1230 c         1195 g          512 t
ORIGIN      
        1 tcaaccggat cggcgaggcg tggcgtccct atcgttcagt cgcgtgctgg tatctgtgga
       61 gaagcctcaa tgcctgaaac gtccatccgc cgcccgttgt cgatcgcgct gctcgtcgtc
      121 gccggcctcg cgctctccac cgcccagccc accacccagg cgcggcggac ctccgacatc
      181 ccgcagctca cgttcgagaa ggtcacgctc ccgaacgggc tcgaggtcat cctgagcccg
      241 aagcgcgggc tgccgatggt ggcagtgaac ctgtggtacc acgtaggccc cgccaacgag
      301 gcggccggcc gcaccgggtt cgcgcacctc ttcgagcaca tgatgttcca gagctcgctg
      361 cacgtgcccg aggactcgca cttcaagctc ctcgaagcgg cgggtgcgag cgacatcaac
      421 ggcaccaccg actacgaccg caccaactac ttccagactg tgccgacgaa tcagctggag
      481 ctcgcgctgt ggctcgagtc ggaccgcatg ggctatctgc tcgagaaggt gacgcaggcg
      541 tcgctctcga accagcagga cgtcgtgcgc aacgagcggc gtcagagcgt ggagaaccag
      601 ccatacggga tggccgacga agccgcggtg cagatcctct tcccgaaggg gcatccgtat
      661 tacggcaacg tcatcggatc gcacgaagac atccaggcgg tgaagctcga agacgtgcac
      721 tcgttcttcc gccagtacta cgcgcctaac aacgccagcc tcgccatcgt cggcgacttc
      781 gacgtggcgc aggccaaggc actcgtcacc aagtacttcg gtacgttcaa gcgcggcccc
      841 gccgtgccgc ccgccaaggc cgacacgccg aagatcacga gcgagcggcg gcagacggtg
      901 caggcgcgcg tgcagctgcc gcgcgtcacc atggcgtgga tcacgccgcc gatcttccag
      961 gcgggcgacg ccgacgccga cgtggcggcg caggtacttg gcggcggccg ctcgagccgt
     1021 ctgtacaaga agctggtcta cgaaaagcag atcgcgcaga acgtcgtggc gcagcagtac
     1081 tcgctgattc tcggatcgat gttccaggtc gaggccacgg cacggcccgg ccacacggcc
     1141 gaggagctgg agaaggcgat cgacgaggag ctggccgcgt tccgcgccaa cccgccgacc
     1201 gccgaggagc tcgagcgcgc gcgcaacacc atcgagacca acatcatcgg cggcctcgag
     1261 cgtctgggcg gcttcggcgg catagccgac cgcctgaact cctacaacca ctatctgaag
     1321 aacccgggtt tcctcgagca ggacatccag cgctatcgcg ccgtcacgcc ggccagcgtg
     1381 ctggcgttcg ccaacgccaa cctggcgccg aacgcgcgcg gcatcatcta cgcggtgccg
     1441 ggcaccccgg cagccccgcc gaacccggcc acgccgccgg caccgtcggc cgccgcgggg
     1501 cagaagccgg gcccctcgat caacgccgac gagccgtggc gcaacacgca gcccaagccg
     1561 ggggcggcca agccgctgca gctggccacg ccgaccacgg ccacgctgcc gaacggcctc
     1621 acgttgatcc tgagcgagaa gcacgaggtg ccgatcgtcg cggccagcct ggtgttccgc
     1681 ggcggtagcg attcgaaccc ggccgacaag ccggggctcg ccaacttcac ggccgcgatg
     1741 ctcgacgaag gcacctccac gcgcaacgcg ctggccattg ccgacgagct cgcgcggctt
     1801 ggcgcgacgc tcggcaccgg cagctcgatg gactcgatga cggtgtcggc gcgctcgctc
     1861 gcaaagaact tcccggcggc gctggacctc gtggcggacg tcacgctccg gccgtcgttc
     1921 ccggccgacg agatcgatcg ccagcgcgcg cagcggctcg gtcagctcgt ccagcagcgc
     1981 gacaatccgg cggcgctcgt ggggaccgtg gcgatgcagg cggcctatgg cacgcggcat
     2041 ccgtacggct tcgccgagat cggtaccgaa gcctcggtga aagcgatctc gcgcaccgac
     2101 atgcaggcgt tctggaagga ccgcttcgtg ccgaacaacg ccgccctcgt ggtggccggc
     2161 gacatcacga tgcccgagct gcgcgcgttg gcggagaagg cgttcggcgc gtgggagcgc
     2221 ggctccgcgt cgcggccgca gctcggcgcg ccgcagatga cggaggcgcg ggtggtcatc
     2281 gtggacaagc ccgcgagccc gcagacgcag ctgcgcgtgg tcggcatcgg cgccgagcgc
     2341 tcatcgcccg acttccgccc gctgcaggtg atgaacatga cgctcggcgg gctgttctcg
     2401 agccgcatca acatgaacct tcgcgaagcg cacggctaca cgtacggcgc cagctcgcag
     2461 ttcacgttcc gccgcgcgcc gggtccgttc caggtggccg ccggcattcg caccgacgtc
     2521 acggcgcccg cggtcgccga ggtgttcaag gaaatcctca gcatggcgca gaagccgatg
     2581 acggccgacg agctgcagcg ggcgaaggac tcgatgtcct attcgctgcc gggcgccttc
     2641 gagtcgagcg ccaacgccgt gggcaacttc tcgaacgtgt tcgtctacga cctgggtctc
     2701 gactactact cgcgctacgc cgcgcaggtg aacgccgtca ccgtcgagca ggcggcggcg
     2761 gtggcccgta agtatctcgt ttcagaaaag atggtggtga tcgcggtggg cgaccgctcc
     2821 aagatcgagg tgccgctgcg cgagctcggt ctgggccccg tcgagatctg ggatgcggac
     2881 gggaagaagg tgaattgaga ggcttccggc ttcgggcctc gggcttcagg acaagcggcc
     2941 tcaggccgga gcctcccgaa gcctgaagcc cgaagcccgg agcctttctt gatatgattg
     3001 cggactggaa cagtcggata tggcggaggt caccccgggg cagtccccaa gcgtctcgtc
     3061 tgtcgttgac ctgatcggaa acacaccgct catccggctg tcgagtttcg aagcagggct
     3121 ccgcaacgtc gagctctacg ccaaggccga gtggcgcaat ccgggcgggt cggtgaagga
     3181 ccgcgccgcc gcgcggatga ttgccgacgg cgagaagtcg ggcgcgctca cccgcgacaa
     3241 gatcctgctc gacgccacgt cgggcaacac gggcatcgcc tacgcgatga tcggcgcggc
     3301 gcgcggctac cgggtgcgcc tgtgcgtacc cgagaacgtg acgcccgagc ggaagcggat
     3361 tctgaaggcg ttcggcgcgg aggtggtgtt cacggatccg atggaagggt ccgacggcgc
     3421 catcatcaag gccaaggcga tgtacgcgga gcacccggac ctgtatttct atccggacca
     3481 gtacaacaac ccgggcaact ggcgcgcgca ctacgacacg acagcgcccg agattctcga
     3541 gcagacgcgg gggcggatca cgcacttc
//
LOCUS       DASSYW010000136         2066 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_604439, whole genome shotgun sequence.
ACCESSION   DASSYW010000136 DASSYW010000000
VERSION     DASSYW010000136.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2066)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2066)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2066
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_604439"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(166..348)
                     /locus_tag="VFN38_02165"
     CDS             complement(166..348)
                     /locus_tag="VFN38_02165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010585.1"
                     /translation="MLVDLHAHYPMHVIPAEQRRVPLHRWRRARLRALLVDLISRAAN
                     YQGPGGEPSVTAELLA"
     gene            complement(349..1500)
                     /locus_tag="VFN38_02170"
     CDS             complement(349..1500)
                     /locus_tag="VFN38_02170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010586.1"
                     /translation="MTSRELLERFKPHLIYDTQESYFADSAAMSTDIPSNLLMRKDRR
                     TVVAAATPKAGQAKLSLALLSGGAYGDSGHEYREGDYISLPSRDYAGVYRAIRVKPGY
                     RNVVYGRAFYDGAKPRWLQYWLYYLYNPAPARHLGVGYGAHEGDWEMIQLRLGDDGRP
                     DMAAYAQHKGAEMRGWRDVEKTGSGETPVVYVARASHASYFRRVHLPWERADGATPAP
                     PLTLVELTESAPPWVQWRGAWGDTRPEEVLGVGVGERSPGGPVAHEEWKDPSLVRRTR
                     EAPPVLLEPMPPAPETLTVRREGAHAEIAYAFAGGDRGTATALLVTVSSPDDKYPPIT
                     DTLPITAAAGTVVAPTELEPSERYAVHVSAVNDQGATSEALTRHLAPEV"
     gene            complement(1514..>2066)
                     /locus_tag="VFN38_02175"
     CDS             complement(1514..>2066)
                     /locus_tag="VFN38_02175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010587.1"
                     /translation="LHQLPLAEEAAGDGTAVDAVLRVEYLQRALVGGRVDFAKSLASK
                     VARDAARDPFGALVAVYVLLRLGCHSEVGEVATEVVRIAPSFADAYVLRGEFEAVRGR
                     PEASAQAFIDAVNSGIPVFGEGLTRLIEGLRASGFVHPRAAAVRHVFQRHVRGSMWSA
                     FTPRRALEAGRPVISAGDLGFEA"
BASE COUNT          282 a          752 c          744 g          288 t
ORIGIN      
        1 caccacgcgc acgccggttt gcgtcacggc ctcggcctcg acggcgtcga tttggtcgag
       61 cacggtgtcg atgtagccgg gtcgtggcgg cgcgccgtac tcgcagtcga agtcgatctc
      121 gtcgaacggc ccgtagagca ccgacagggc gatgccgacg tccccctaag cgagcagttc
      181 ggcggtcacc gacggctcac cgccgggacc ctggtagttg gcggcgcgcg agatcaagtc
      241 gaccagcagc gcgcgcaggc gcgccctgcg ccagcggtgc agcggaacgc gccgctgctc
      301 ggccgggatg acgtgcatcg ggtaatgcgc gtggaggtcg acgagcactc agacctccgg
      361 cgccaggtgg cgggtcagcg cctcgctggt ggcgccctgg tcgttgaccg cgctgacgtg
      421 caccgcgtag cgctcgctcg gctcgagctc cgtgggcgcg accaccgtcc cggccgcggc
      481 ggtgatcgga agggtgtcgg tgatgggcgg gtacttgtcg tcgggcgagc tgaccgtcac
      541 gagcagcgcg gtcgcggtgc cccggtcgcc gcccgcgaac gcgtacgcga tctccgcatg
      601 ggcgccctca cggcgcacgg tgagggtctc cggcgccggc ggcatcggct cgaggaggac
      661 cggcggcgcc tcgcgcgtcc ggcgtaccag cgacgggtcc ttccactcct cgtgcgcgac
      721 cggcccgcct ggactccgct cgccaacgcc gacgcccagc acctcctcgg gtctcgtgtc
      781 gccccaggcg ccgcgccact gcacccacgg cggcgcgctc tcggtcagct ccacgagcgt
      841 gagcggcggc gccggcgtgg ccccgtcagc gcgctcccaa ggcaggtgca cgcggcggaa
      901 gtacgacgcg tgggacgcgc gcgcgacgta cacgacgggc gtctcgcccg aaccggtctt
      961 ctcgacgtcg cgccacccgc gcatctcggc gcccttgtgc tgggcgtagg ccgccatgtc
     1021 cgggcgcccg tcgtctccga ggcgaagctg gatcatctcc cagtcgccct cgtgcgcccc
     1081 gtacccgacg ccgagatggc gtgccggggc cgggttgtag aggtagtaca gccagtactg
     1141 cagccagcgc ggcttggcgc cgtcgtagaa ggcgcgcccg tacacgacgt tgcggtagcc
     1201 gggcttgacg cggatcgcgc gatagacgcc ggcatagtcg cgcgacggca ggctgatgta
     1261 gtcgccctcg cggtactcgt gcccgctgtc gccataggcg ccgcccgaca gcagcgcgag
     1321 cgacagcttc gcctggccgg ccttcggcgt cgcggccgcg accacggtcc tgcggtcctt
     1381 gcgcatcagc aggttgctgg ggatgtccgt ggacatcgcc gccgagtcgg cgaagtagct
     1441 ctcctgcgtg tcgtagatca ggtgcggctt gaaacgctcg agcagctcgc gtgacgtcac
     1501 cggtggctcc ctcctatgcc tcgaatccga gatctcctgc gctgatcacc gggcggcccg
     1561 cctcgagcgc ccggcgcggc gtgaaggccg accacatcga gccgcgcacg tggcgctgga
     1621 agacgtgacg gaccgccgcg gcgcgcgggt gtacgaagcc gctcgcgcgg agcccctcga
     1681 tcaggcgcgt gaggccctcg ccgaaaacgg ggatgccact gttcaccgca tcgatgaacg
     1741 cctgcgccga ggcctcgggc cgaccgcgaa ccgcttcgaa ctcgcctcgc aggacgtagg
     1801 cgtcggcgaa cgacggggcg atgcggacga cctcggtcgc gacctcgccg acctccgaat
     1861 ggcagccgag gcgcagcagc acgtagacgg ccaccagcgc tccgaacggg tcgcgggcgg
     1921 cgtcgcgcgc gaccttgctg gccagcgact tggcgaagtc gacgcggccg ccgaccagcg
     1981 cgcgctgcag gtactcgaca cgcagcaccg cgtccacggc ggtcccgtcc ccggcggctt
     2041 cctcagccag cggcagctgg tgcagg
//
LOCUS       DASSYW010000137         3749 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_15370, whole genome shotgun sequence.
ACCESSION   DASSYW010000137 DASSYW010000000
VERSION     DASSYW010000137.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3749)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3749)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3749
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15370"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            81..725
                     /locus_tag="VFN38_02180"
     CDS             81..725
                     /locus_tag="VFN38_02180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HET9010588.1"
                     /translation="MRIDVRTVGPFQENCYLVVDEATNRAVLIDPGDEGDRLVEMVRL
                     SGATLEAIWITHAHLDHIGGIAGVRRHYAVPVHLHPLDLRLYTRLAVQSADVFGVPFE
                     QPDGPDGELAEGQVLSCGTLRFTVMHLPGHAPGLVSFTGEGVAFCGDLLFAGSIGRTD
                     LPLCNPFDMDASLDRFGTLPAETVVYPGHGAATTIADELRSNPFLAGRARALKR"
     gene            737..1204
                     /locus_tag="VFN38_02185"
     CDS             737..1204
                     /locus_tag="VFN38_02185"
                     /inference="COORDINATES: protein motif:HMM:NF025046.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4149 domain-containing protein"
                     /protein_id="HET9010589.1"
                     /translation="MPFMLASIVLLALWLGAALLMAGVVAPAAFAVLPTRTLAGAIVG
                     RVLPTLFWSGIVIGLAVTALTWGLPERVWRTGAALALAGACAAAQLLVAPRIERVRQQ
                     IGGAVDALDPSDPRRQAFGRLHGLSVAWMGLGGLAALVALIALVRLASARSTT"
     gene            1201..1452
                     /locus_tag="VFN38_02190"
     CDS             1201..1452
                     /locus_tag="VFN38_02190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010590.1"
                     /translation="MSDEPRLPRIGVDDAPDSLRSTFDAFIRQRGKVPNLFRVAGHAP
                     RITARLAALNAEVMGPGEVPVLLKELLSTRVSHINLCDY"
     gene            1471..1734
                     /locus_tag="VFN38_02195"
     CDS             1471..1734
                     /locus_tag="VFN38_02195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010591.1"
                     /translation="MARRLGATDGQLDAVARGEYDEFEPAWRSAFGFADAMTPTPGVV
                     GDAPFAELAAHWSPAQIVEITAVICMYNFFNRFAHALDVPITR"
     gene            1788..3215
                     /locus_tag="VFN38_02200"
     CDS             1788..3215
                     /locus_tag="VFN38_02200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate ammonia-lyase"
                     /protein_id="HET9010592.1"
                     /translation="MAAGTRTEKDPLGPKEVPSDALYGVQTLRARENFPISGLAPLWP
                     FVMAQTWIKKAAAMTHKETGRLDAKLADAIVAAADEVLAHQHDAHFIVDPYQAGAGTS
                     HNMNVNEVLANRANELLGGARGTYTPVHPNDHVNMAQSTNDTIPTNIRLSVLSQLDGL
                     VGAFEGLRDALAAKGREFDDIVKAGRTHLQDAMPIRLGQEFTAYAGSVDRNIRRVKEA
                     ADYLRDLGIGGSAVGTGVTVEKEYPALMNKHLRAITKLDLRIGADRIQLMQSMGDAAA
                     FSASLRVMAVDLSKIASDLRLMVMGPRTGIDEIKLPAVQPGSSIMPGKINPSIPEMVN
                     QVCFQVMGLDTTVSIAAEHGQLELNVMMPVIAHNILLSMRILTNTATVFTQKCVVGIE
                     ANRDMLAYWVERSAALATALMPHIGYAKAAELSKQSVKEGVLVRDMVKRDKLLPADQI
                     DDVLDLRKMTEIGVPGGTHGMVAGG"
     gene            3258..3746
                     /locus_tag="VFN38_02205"
     CDS             3258..3746
                     /locus_tag="VFN38_02205"
                     /inference="COORDINATES: protein motif:HMM:TIGR00738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HET9010593.1"
                     /translation="MRITTQAEYGLICALHLARRLDDGPVTGREIAATERLPVDYVEQ
                     IMLKLRRADIVKSTRGAHGGYHLARDPQRISVRDVIAASEHSTFEVHCTSHPVEEERC
                     ASSHNCSIRPVWMLLQRRIDDVLESVRLSDLLMQEGQVRERIGLAPAVAGGRQALPVL
                     QG"
BASE COUNT          567 a         1314 c         1329 g          539 t
ORIGIN      
        1 atcgcggtcg agaagtacct caaggcgcgg tccgagggcg ggcacgcggt cgatccgcag
       61 ggcaccggag gatacgcggt gtgaggatcg acgtgcgcac ggtgggcccg ttccaggaga
      121 actgctacct cgtcgtggac gaggcaacga accgcgccgt gctgatcgat cccggcgacg
      181 agggcgaccg cctggtggag atggtgcgtc tctccggcgc caccctcgag gcgatctgga
      241 tcacccacgc ccacctcgac cacatcggcg gcatcgccgg ggtgcggcgt cactacgccg
      301 tgcccgtgca cctgcatccg ctcgacctgc ggctgtacac ccggctcgcc gtgcagtccg
      361 ccgacgtctt cggcgtgccg ttcgagcagc ccgacggacc ggacggggag ctggcggagg
      421 ggcaggtgct gagctgcggc acgcttcgct tcaccgtcat gcacctgccg gggcacgccc
      481 cggggctcgt gagcttcacc ggcgaggggg tcgccttctg cggcgacctg ttgttcgccg
      541 gctccatcgg ccggaccgac ctcccgctct gcaacccctt cgacatggat gcctcgctcg
      601 atcggttcgg aacgctgccg gccgagacgg tggtgtatcc gggacacggc gcggcgacga
      661 cgatcgccga cgagctgcgc tcgaacccgt tcctcgccgg ccgcgctcgc gcgctgaagc
      721 ggtgacggcg cgcgcgatgc ccttcatgct cgcgagcatc gtcctgctgg cgctgtggct
      781 gggcgcggcg ctcctcatgg cgggggtcgt ggcgcccgcc gcgttcgcgg tgcttcccac
      841 ccggaccctc gccggggcga tcgtcgggcg ggtcctgccc accctgttct ggtcgggcat
      901 cgtgatcggc ctcgccgtca ccgcgctcac gtgggggctg ccggagcgcg tctggcgcac
      961 cggcgccgcg ctggcgctgg ccggcgcgtg cgccgcggcc cagctgctcg tggcgccgcg
     1021 catcgaacgg gtgcgccagc agatcggcgg ggcggtggac gcgctcgatc cgtccgatcc
     1081 gcgccgccag gcgttcggcc ggctgcacgg cctcagcgtg gcatggatgg ggctgggcgg
     1141 gctggccgcg ctggtcgccc tcatcgccct cgtccgcctc gcctccgcgc ggagcaccac
     1201 gtgagcgacg agccccgcct gccgcggatc ggcgtggacg acgcccccga ctcgctccgc
     1261 tccaccttcg acgccttcat ccggcagcgg gggaaggtgc ccaacctgtt ccgcgtcgcc
     1321 ggccatgcgc cgcgcatcac cgcccggctc gcggccctga acgccgaggt gatggggccc
     1381 ggcgaggtgc cggtgctgct caaggagctc ctcagcacgc gggtctcgca catcaatctg
     1441 tgcgattatt gactggcttc ccacaccgcc ttggcaaggc ggctgggcgc gacggacgga
     1501 cagctcgacg cggtcgcccg cggcgagtac gatgagttcg agccggcgtg gcggtcggcg
     1561 ttcggcttcg ccgacgccat gacgccgacg ccgggcgtcg tgggcgacgc gccgttcgcg
     1621 gagctggcgg cgcactggtc gcccgcacag atcgtcgaga tcaccgccgt gatctgcatg
     1681 tacaacttct tcaatcgctt cgcgcacgcg ctcgacgtcc cgatcacccg gtgacgcccc
     1741 cgccgcgctc ctccaccgcc aattccctcc catccgagag accgaccatg gccgccggca
     1801 cccgcacaga gaaggatccc ctgggaccga aggaagtccc ctccgacgcg ctctacggcg
     1861 tgcagacgct gcgcgccagg gagaacttcc cgatcagcgg gctcgccccg ctctggccct
     1921 tcgtgatggc gcagacctgg atcaagaagg cggccgccat gacgcacaag gagaccggcc
     1981 gtctggacgc gaagctggcc gacgcgatcg tcgccgccgc cgacgaggtg ctcgcgcacc
     2041 agcacgacgc gcacttcatc gtggatccct accaggccgg cgcaggcacc tcgcacaaca
     2101 tgaacgtgaa cgaggtgctc gcgaaccggg cgaacgagct gctcggcgga gcgcggggca
     2161 cgtacacccc cgtgcacccg aacgaccacg tgaacatggc gcagagcacg aacgacacga
     2221 tccccaccaa catccggctg tccgtcctct cgcagctgga cgggctggtg ggggcgttcg
     2281 aggggctgcg cgacgcgctg gcggcgaagg ggcgcgagtt cgacgacatc gtgaaggcgg
     2341 ggcgcacgca cctccaggac gcgatgccga tccgcctcgg ccaggagttc acggcctacg
     2401 cgggctcggt ggaccgcaac atccgccgcg tgaaggaggc cgcggactac ctgcgcgacc
     2461 tcggcatcgg cggcagcgcg gtgggcaccg gcgtcacggt ggagaaggag tatccggcgc
     2521 tgatgaacaa gcacctccgc gccatcacga agctcgacct ccgcatcgga gccgaccgca
     2581 tccagctcat gcagagcatg ggggacgccg cggcgttcag cgcgtcgctc cgggtgatgg
     2641 cggtggacct cagcaagatc gcgagcgatc tgcggctgat ggtgatgggc ccgcgcaccg
     2701 ggatcgacga gatcaagctg cccgccgtgc agcccggctc gtccatcatg cccggcaaga
     2761 tcaatccgtc catccccgag atggtcaacc aggtgtgctt ccaggtgatg gggctcgaca
     2821 ccacggtgag catcgccgcc gagcacggac agctcgagct caacgtgatg atgccggtga
     2881 tcgcccacaa catcctgctg tcgatgcgga tcctcacgaa cacggccacc gtgttcacgc
     2941 agaagtgcgt ggtgggcatc gaggcgaacc gcgacatgct ggcctactgg gtggagcgga
     3001 gcgcagccct cgcgacggcg ctgatgccgc acatcgggta cgcgaaggcg gcggagctga
     3061 gcaagcagtc ggtgaaggag ggggtgctgg tgcgcgacat ggtgaagcgg gacaagctgc
     3121 tgcccgccga ccagatcgac gacgtgctgg atctgcggaa gatgaccgag atcggggtgc
     3181 ccggcggcac ccacggcatg gtcgcggggg gctgagcggc cctgtccgcg ttccggggcg
     3241 gcagttacat ttgaaacgtg cgaatcacta cacaggctga atacggactc atctgtgccc
     3301 tgcatctggc ccgtcgcctc gacgacgggc cggtgacggg tcgtgagatc gcggcgaccg
     3361 agcggctgcc ggtggactac gtcgagcaga tcatgctgaa gctgcgccgc gccgacatcg
     3421 tgaagagcac gcggggcgcg cacggcggct atcatctcgc ccgcgacccg cagcggatca
     3481 gcgtgcgcga cgtgatcgcc gcctccgagc actcgacgtt cgaggtgcac tgcacgtcgc
     3541 atccggtgga ggaggagcgc tgcgcgtcgt cgcacaactg cagcatccgg ccggtgtgga
     3601 tgctcctcca gcggcgcatc gacgacgtgc tggagagcgt gcggctcagc gacctgctca
     3661 tgcaggaagg gcaggtgcgt gagcgcatcg gcctcgcgcc ggcggtggcc ggcgggcgcc
     3721 aggcgctgcc ggtcctgcag ggctgacgc
//
LOCUS       DASSYW010000138         3077 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1268001, whole genome shotgun sequence.
ACCESSION   DASSYW010000138 DASSYW010000000
VERSION     DASSYW010000138.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3077)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3077)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3077
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1268001"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(133..1086)
                     /locus_tag="VFN38_02210"
     CDS             complement(133..1086)
                     /locus_tag="VFN38_02210"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004749 - ribose phosphate diphosphokinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0006015 - 5-phosphoribose 1-diphosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009156 - ribonucleoside monophosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009165 - nucleotide biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HET9010594.1"
                     /translation="MDGLAVPAHGFKLLAGTGNRPLAEEISRHLGIELCKLTCTRFAD
                     GEIFVRIDENVRGNDVFIVQPTNAPAENIMELLLLIDAARRASSARVTVVMPYYGYSR
                     QDRKDQPRVAIGAKLMANMIAGAGADRVLGIDFHQHQLQGFFDIPVDHLYAMPVLSGY
                     FKRKQLKDVVIVAPDVGAAKMARGFAKRLDASLAIIDKRRPRANVSEVVNVVGEVEGR
                     DVILADDMIDTAGTVCEAARALKQLGANDVYVCATHGLLSGPAVQRITDAPIKEVVIT
                     DTILTPAEKRFDKLTVLSVGELLAKAIRYTHAEQSVSSLFD"
     gene            complement(1146..1216)
                     /locus_tag="VFN38_02215"
     tRNA            complement(1146..1216)
                     /locus_tag="VFN38_02215"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1182..1184),aa:Gln,seq:ttg)
     gene            complement(1239..2165)
                     /gene="ispE"
                     /locus_tag="VFN38_02220"
     CDS             complement(1239..2165)
                     /gene="ispE"
                     /locus_tag="VFN38_02220"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: protein motif:HMM:TIGR00154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050515 - 4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase activity
                     [Evidence IEA];
                     GO_process: GO:0016114 - terpenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HET9010595.1"
                     /translation="MTRAAAATLRGARAVQAAAQAKVNLRLRILAREASGFHQLETLL
                     LRLELADTVRVRRTASARSLDVSGADPSAIGPAERNLAWRAAVAYCDAAGWTDGFAIE
                     LEKRIPIGGGLGGGSADAGAVLRAMDAMAAKPIGEAGLLRIAFTLGADVPFLASEHAY
                     ALAWGRGERLLALKAPPRRQVVLVGPPFGVSTTEAYGWLAAPRASAVQVGEAVGVLSP
                     ARLARWEAILPLAANDFEPVVATRHPAIADLVAQLRAWGAQIAMMSGSGSVVFGVMPA
                     SAEVLVQSEGAGRGPALVTHSAVRVEPVVALD"
     gene            complement(2162..>3077)
                     /locus_tag="VFN38_02225"
     CDS             complement(2162..>3077)
                     /locus_tag="VFN38_02225"
                     /inference="COORDINATES: protein motif:HMM:TIGR00374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase transmembrane
                     domain-containing protein"
                     /protein_id="HET9010596.1"
                     /translation="VAATCIFPLRALRWRPILDPIAPGLPFSRLWSATAIGMMINNVV
                     PARAGEFARAYALSRSTPQVPFPAAFASLAVDRLFDAVVVLLLMFVAMLDPAFPSGAT
                     FMDRPVASYATFFLLVTVAGVAVLYAVVLFPVQVLRLYELLARRLAPRLEDRGRQALV
                     SLSNGLSVLRTPRRFAAVFAWTLLHWLVNGLAFWIAFRAVGIDAPFSAALFLQGLIAI
                     GVAIPQAPGFFGVFETFGKYGLGIYGVPPDAAVTWAIGFHFLSYVPITLIGAWYFVRT
                     GLSMHDLGGAERAATEEPEPPPRPSPAT"
BASE COUNT          490 a         1118 c         1071 g          398 t
ORIGIN      
        1 aggcggctgc gtccgcccta ccatgccggt gccgccgaac ggcggcgaat cgcggggacc
       61 cacaactaca agctactcgt gatcggtgca cggtgatcgg tcacgccgtt caccgctcac
      121 cgttcacgtt cctcaatcga acagggagct cacgctctgc tccgcgtgcg tgtaccggat
      181 cgccttggcc agcagctcgc ccaccgacag cacggtgagc ttgtcgaacc gcttctcggc
      241 gggggtgagg atcgtgtcgg tgatcaccac ctccttgatc ggcgcgtcgg tgatgcgctg
      301 caccgccggc ccgctcagca ggccgtgggt ggcgcacacg tagacgtcgt tcgctccgag
      361 ctgcttcagg gcgcgcgcgg cctcacagac cgtgcccgcc gtatcgatca tgtcgtcggc
      421 caggatgacg tcgcggccct ccacctcgcc gaccacgttc accacctcgc tcacgttggc
      481 gcgcgggcgc cgcttgtcga tgatcgccag cgaggcgtcc agccgcttcg cgaacccgcg
      541 cgccatcttc gccgccccca cgtcgggcgc cacgatgacg acgtccttca actgcttccg
      601 cttgaaatac ccgctcagca ccggcatcgc gtagaggtgg tcgacgggga tgtcgaagaa
      661 cccctgcagc tggtgctgat gaaagtcgat cccgagcacc cgatcggcgc ccgccccggc
      721 gatcatgttc gccatcagct tggcgccgat cgccacccgg ggctggtcct tgcggtcctg
      781 ccgtgaatag ccgtagtacg gcatcaccac cgtgacgcgc gccgagctgg cgcgccgcgc
      841 cgcgtcgatc aggagcagca gctccatgat gttctcggcc ggcgcattgg tcggctggac
      901 gatgaacacg tcgttgccgc gcacgttctc gtcgatccgg acgaagatct cgccatccgc
      961 gaagcgcgtg caggtgagct tgcacagctc gatcccgagg tgcctcgaga tctcttcggc
     1021 gagcggacgg ttgcccgtcc ccgccaacag cttgaacccg tgcgccggca cggcgaggcc
     1081 gtccatgcaa agccttgtaa agtaaggtgg gcgagcgact tggtcaaacc acgcgggtgc
     1141 gccgattgcc cctcttggat tcgaaccaag attcgtggct ccaaaggcca ctgtcctgcc
     1201 attggacgaa ggggcagctg gccgttcagc acccaaagct agtcgagggc gacgaccggc
     1261 tcaactcgca ccgcgctgtg cgtcacgagc gccggcccgc gcccggcgcc ctcgctctgc
     1321 accagcacct ccgccgacgc gggcatcacg ccgaacacga cggagcccga gccgctcatc
     1381 atcgcgatct gggcgcccca cgcccggagc tgcgccacga gatcggcgat cgccggatgc
     1441 cgagtcgcca ccaccggctc gaagtcgttg gcggccaggg gaaggatcgc ctcccaccgg
     1501 gcgagccgcg ccggggagag cacgcccacc gcctctccga cctggacggc ggaggcgcgc
     1561 ggcgcggcga gccagccgta ggcctcggtg gtgctcacgc cgaacggggg cccgacgagc
     1621 accacctggc gccgcggcgg cgccttcagc gcgagcaggc gttcgccccg cccccacgcc
     1681 agcgcgtagg cgtgctcgct cgccaggaag ggcacgtccg cgcccagggt gaaggcgatg
     1741 cgcagcagcc cggcctcgcc gatgggcttc gccgccatgg cgtccatcgc gcgcagcacg
     1801 gcgccggcgt ccgcgctgcc gccccccagt cccccgccga tggggatgcg cttctccagc
     1861 tcgatcgcga acccgtcggt ccagccggcc gcatcgcagt acgccaccgc ggcgcgccac
     1921 gcgaggttgc gctccgcggg gccgatggcc gacggatccg cgcccgacac gtcgagagag
     1981 cgggccgacg ccgtgcgccg cacccgcacg gtgtcggcga gctcgaggcg cagcagcagt
     2041 gtctcgagct ggtggaagcc gctcgcctcg cgcgccagga tgcgcagccg caggttgacc
     2101 ttcgcctggg ccgccgcctg caccgccctc gcgccgcgga gggtcgccgc cgccgcgcgg
     2161 gtcacgtggc gggagagggt cgcggcggcg gctccggctc ttccgtcgcc gcccgttccg
     2221 ccccgcccag gtcgtgcatc gagagtcccg tccgcacgaa gtaccaggcg ccgatcaggg
     2281 tgatgggcac gtacgacagg aagtggaagc cgatggccca ggtgacggcg gcatcgggcg
     2341 gcacgccgta gatgccgagc ccgtacttgc cgaaggtctc gaacacaccg aagaagccgg
     2401 gcgcctgcgg gatggccacg ccgatggcga tgagcccctg caggaagagc gcggcgctga
     2461 acggcgcgtc gatccccacc gcccggaagg cgatccagaa cgcgagcccg ttcaccagcc
     2521 agtggagcag cgtccacgcg aacaccgcgg cgaagcggcg cggcgtccgg agcacgctca
     2581 ggccgttgga gagcgacacc agcgcctggc gcccgcggtc ctcgagccgc ggcgcgagcc
     2641 ggcgcgcgag cagctcgtag aggcggagca cctgcacggg gaacagcacc accgcgtaca
     2701 ggaccgccac gccggccacc gtcacgagca ggaagaaggt cgcatagctc gcgaccggcc
     2761 ggtccatgaa ggtcgcgccg ctgggaaagg cggggtcgag catcgcgacg aacatgagca
     2821 ggagcaccac gacggcgtcg aacaggcggt ccaccgcgag ggaggcgaag gcggcgggaa
     2881 agggcacctg cggcgtggag cgcgacagcg cgtacgcgcg cgcgaactcg ccggcgcgcg
     2941 cggggaccac gttgttgatc atcatcccga tggccgtcgc gctccagagc cgcgagaagg
     3001 gcaggccggg cgcgatgggg tcgaggatcg gtcgccagcg cagggcgcgc agcgggaaga
     3061 tgcaggtggc ggcgacg
//
LOCUS       DASSYW010000139         3526 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_291374, whole genome shotgun sequence.
ACCESSION   DASSYW010000139 DASSYW010000000
VERSION     DASSYW010000139.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3526)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3526)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3526
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_291374"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1197
                     /locus_tag="VFN38_02230"
     CDS             <1..1197
                     /locus_tag="VFN38_02230"
                     /inference="COORDINATES: protein motif:HMM:NF014147.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 30 beta sandwich
                     domain-containing protein"
                     /protein_id="HET9010597.1"
                     /translation="FGAAMTDASAHLLRNRLGANRDAVMRELFGPPPGIGLGLLRVPI
                     GASDFSMRHYTFDDLPAGATDSAFARFSIDADRADKLPALRQALAINPRLAIVASPWS
                     APAWMKTSGSLIGGTLRPEHHGSFAEYLVRFVEGYAAEGVPVFALTLQNEPAFEPGDY
                     PGMRLDPWARAVIIGRHLGPLLERRGLRTRILEWDHNWDQSAAPLAVLADSAARRYVS
                     GVAWHCYAGNVAAQDSVHAAHPDKDAYFTECSGGGWATVFGDNLRFDVGTLIIGATRG
                     WARGVAFWNLALDETGGPHLGGCGNCRGVITIDSRTGAVTRNVEYYALAHASRFVRPG
                     ARRIASATDVRGVQSVAFRNADDRSTGLIVLNTGASDVPVLVRDGTRGIRYLLRAGAV
                     ATLRWR"
     gene            1308..2555
                     /gene="icd"
                     /locus_tag="VFN38_02235"
     CDS             1308..2555
                     /gene="icd"
                     /locus_tag="VFN38_02235"
                     /EC_number="1.1.1.42"
                     /inference="COORDINATES: protein motif:HMM:TIGR00183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004450 - isocitrate dehydrogenase (NADP+)
                     activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate dehydrogenase (NADP(+))"
                     /protein_id="HET9010598.1"
                     /translation="MASYRFATRPSEGDAIAFEQGVLRVPNHPVIPFVEGDGTGPDIW
                     RASVRVFDAAIRKAYGSERRVSWMKVYAGEEAHAKHGEWLPDETLEAFKEFRVSIKGP
                     LSTPVGGGIRSLNVTLRQVLDLYACIRPVRYFEGVGNPMKEPEKLNVVIFRENTEDVY
                     AGIEWKAGSPEAEELAQFIRTKYKKDIRAHSAIGIKPMSEFGSKRLVKMAMQYALENG
                     RRSLTLVHKGNIMKFTEGAFRDWGYEVAASDFAGQFCSEADLAKGGGVARADCLVVKD
                     RIADAMFQQLLLRPDEYDVIATPNLNGDYISDAAAAQVGGLGLAPGGNVGDGVAVFEA
                     THGTAPKYANLDKINPGSVVLSGVMMFEYMGWKEVGQLIVRGLENAIKSKRVTYDLAR
                     QMPGATEVSTSAFGDEIIKGMGA"
     gene            2589..>3526
                     /locus_tag="VFN38_02240"
     CDS             2589..>3526
                     /locus_tag="VFN38_02240"
                     /inference="COORDINATES: protein motif:HMM:NF013079.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M17 family peptidase N-terminal
                     domain-containing protein"
                     /protein_id="HET9010599.1"
                     /translation="MTLSLTAGPAELGAIDTPLLVVALPAGAGMDAALAPLDRTLGGA
                     LARTLERRDFRGGRDETLHLTGSASGPQRVLLVGIGTPAGRAGALRRAGAIAARQGGR
                     MGVGELAIHAGALDARETEALAVGLAAGAWDYLDTKTPPPADERRAPLTAARILGANA
                     AGLANGLAIAEGHGLARTLGMMPGNLCTPDFLAQTAREIGQRHGLTVTVQGRAEMEQL
                     GMGSFLCVAQGTTQDPKFITLEYFGGAKGAAPVALVRKGLCFDSGGISIKPAQGMEWM
                     KFDMCGAAGVLGAMEAIARLKLPINVVGLVGSTTNMP"
BASE COUNT          513 a         1264 c         1250 g          499 t
ORIGIN      
        1 ttcggcgcgg cgatgacgga cgcctcggcg cacctgctgc ggaaccggct cggggcaaac
       61 cgcgacgccg tcatgcgcga gctgttcgga ccaccacccg gcatcggcct cggcctcctt
      121 cgggtgccga tcggtgcgtc ggacttctcg atgcgccatt acaccttcga cgacctgccg
      181 gcgggagcga cggattccgc gttcgcgcgg ttctccatcg acgccgaccg cgccgacaag
      241 ctgcccgcgc tccgccaggc gctcgcgatc aatccgcggc tggcgatcgt cgcgtcgccg
      301 tggagcgcgc cggcgtggat gaagacgagc ggaagcctga tcggcggcac cctccgcccc
      361 gaacaccacg ggtcgttcgc cgagtacctc gtgcggttcg tggagggcta cgcggcggag
      421 ggagtgcccg tcttcgcgct tacgctccag aacgagccgg cgttcgagcc cggcgactac
      481 cccggcatgc ggctcgaccc gtgggcgcgg gccgtcatca tcgggcggca tctgggcccg
      541 ctcctggagc ggcgcgggct tcgtacgcgg atcctggagt gggaccacaa ctgggaccag
      601 tccgctgcgc ccctcgccgt gctggccgac agcgccgcgc gccgctacgt gagcggcgtc
      661 gcgtggcact gctacgcggg aaacgtcgcc gcgcaggact ccgtgcacgc ggcccacccc
      721 gacaaggacg cgtacttcac ggaatgctcc ggcggcgggt gggccaccgt gttcggcgac
      781 aacctccgct tcgacgtcgg caccctgatc atcggggcca cgcgcggctg ggcgcgcggg
      841 gtcgcgttct ggaacctcgc gctcgacgag acgggggggc cgcatctcgg gggctgcggg
      901 aactgccgcg gcgtgatcac catcgattcc cgcaccggcg cggtgacgcg caacgtggag
      961 tactacgcgc tggcgcacgc cagccgcttc gtgcggcccg gcgcgcgccg catcgcctcc
     1021 gccaccgacg tgcgcggggt gcagagcgtc gcgttccgga acgccgatga ccgttcgacg
     1081 ggcctgatcg tgctcaacac cggcgcgtcc gacgtccccg tcctcgtccg cgacggaacg
     1141 cgcggcatcc ggtacctcct gcgcgcgggc gcggtcgcga ccctgcgctg gcgttagcgc
     1201 gcgggcatgt gggccgggac gcacgcgtcc agtcgcttgc tgcacgatac gccctccggt
     1261 agctttcgcg actgcaaact cactcccaca gacagcaggt tttcggcatg gcgagctacc
     1321 gtttcgcgac ccgtccgtcg gaaggcgacg cgatcgcgtt cgagcagggt gtcctccgcg
     1381 ttccgaacca tccggtcatc cccttcgtcg agggcgacgg caccgggccg gacatctggc
     1441 gcgcctcggt gcgcgtcttc gacgccgcca tcaggaaggc gtacggctcc gagcgccggg
     1501 tgagctggat gaaggtgtac gctggcgagg aggcccacgc gaagcacggc gagtggctgc
     1561 ccgacgagac gctggaggcg ttcaaggagt tccgcgtctc catcaaggga ccgctctcca
     1621 cgcccgtggg cgggggcatc cgttcgctca acgtgacgct ccgccaggtg ctcgacctct
     1681 acgcctgcat ccggccggtc cgctacttcg agggcgtcgg caacccgatg aaggagccgg
     1741 agaagctgaa cgtggtgatc ttccgcgaga acaccgagga cgtgtacgcg gggatcgagt
     1801 ggaaggccgg ctcgccggag gcggaggagc tcgcgcagtt catccgcacg aagtacaaga
     1861 aggacatccg cgcccattcg gccatcggca tcaagccgat gtcggagttc ggctcgaagc
     1921 gcctcgtcaa gatggccatg cagtacgcgc tggagaacgg ccgccggtcg ctcaccctcg
     1981 tgcacaaggg caatatcatg aagttcaccg agggcgcctt ccgcgattgg ggctacgagg
     2041 tggcggcgag cgacttcgcc ggccagttct gctccgaggc ggacctcgcc aaggggggcg
     2101 gcgtggcgcg cgccgactgt ctcgtggtga aggaccgcat cgccgacgcg atgttccagc
     2161 agctcctgct gcgccccgac gagtacgacg tgatcgccac gccgaacctc aacggcgact
     2221 acatctccga tgcggccgcc gcgcaggtgg gcgggctcgg gctcgcgccg ggcggcaacg
     2281 tgggcgacgg cgtggccgtg ttcgaggcga cccacggcac cgcgcccaag tacgccaacc
     2341 tggacaagat caacccgggg agcgtcgtcc tctcgggcgt catgatgttc gagtacatgg
     2401 gctggaagga ggtgggccag ctcatcgtgc gcgggctgga gaacgcgatc aagagcaagc
     2461 gcgtcaccta cgacctggcg cggcagatgc ccggcgccac cgaggtgagc acctcggcgt
     2521 tcggcgacga gatcatcaag gggatgggcg cctaggcccc tctcgcctca ctgcacctgg
     2581 aacacgacat gacgctgtcc ctcaccgccg ggcccgccga gctcggcgcg atcgacactc
     2641 ccctcctcgt cgtcgccctt cccgctggcg cggggatgga tgccgcgctc gcaccactgg
     2701 accggactct cggtggcgcg ctcgcgcgca ccctcgagcg gcgcgacttc cgcggcggcc
     2761 gcgatgagac gctgcacctc acgggcagcg cctccggccc gcagcgcgtc ctgctcgtcg
     2821 gcatcggcac gcccgcgggg cgcgcgggcg cgctgcgccg cgccggcgcg atcgccgccc
     2881 gtcagggcgg ccgcatggga gtgggcgagc tggcgatcca cgccggcgcc ctcgacgccc
     2941 gggagaccga ggcgctcgcc gtcggcctcg cggccggcgc ctgggactat ctggacacca
     3001 agactccccc ccccgccgac gagcggcgcg caccgctcac ggcggcgcgc atcctcggcg
     3061 ctaacgccgc ggggctcgcg aacggcctcg cgatcgccga ggggcacggc ctcgcccgca
     3121 cgctcggcat gatgccgggc aacctgtgca cccccgactt ccttgcgcag acggcgcgcg
     3181 agatcggcca gcggcacggg ctgaccgtca cggtgcaggg gcgcgcggag atggagcagc
     3241 tcggcatggg cagcttcctc tgcgtggcgc aggggacgac gcaggacccg aagttcatca
     3301 ccctcgagta cttcggcggg gccaagggcg ccgcgcccgt ggcgctcgtc cgcaagggcc
     3361 tctgcttcga ctcgggcggc atctccatca agccggcgca ggggatggag tggatgaagt
     3421 tcgacatgtg cggcgcggcg ggggtgcttg gcgccatgga ggcgatcgcc cgcctcaagc
     3481 tgcccatcaa cgtcgtcggc ctcgtgggct ccacgacgaa catgcc
//
LOCUS       DASSYW010000140         2404 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1157244, whole genome shotgun sequence.
ACCESSION   DASSYW010000140 DASSYW010000000
VERSION     DASSYW010000140.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2404)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2404)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2404
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1157244"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            218..751
                     /locus_tag="VFN38_02245"
     CDS             218..751
                     /locus_tag="VFN38_02245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010600.1"
                     /translation="MQEPVEAPTPEALADLVARCDQINRFETQLTSAEEARIAALASG
                     ILVMRQVLELPALAAEDLPPRQARIQHWALTAGHLKEAETPAIHAVRGLFVLDEHEQV
                     KVLVDRTWRGQWRSVTLWKNGELGVSAAAMLEFLARLTRLAQQRAPDVARALLIRSQA
                     VAATHGLLAVGPRQRGG"
     gene            complement(759..1229)
                     /locus_tag="VFN38_02250"
     CDS             complement(759..1229)
                     /locus_tag="VFN38_02250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010601.1"
                     /translation="MHDPERSNNFTRAARPAPPTLKERNAVQRNVERLLDELAPEKAL
                     RRGEAPPMQIEQHRTPSGCVLQASNRALSVSWFADTSEELTLGELQVVLWHGTVTRRG
                     AARPVKGAVVASELVLHPMESVAESSVWRSSDGREFDSESLAAYCVELLATLPE"
     gene            1438..1860
                     /locus_tag="VFN38_02255"
     CDS             1438..1860
                     /locus_tag="VFN38_02255"
                     /inference="COORDINATES: protein motif:HMM:NF015669.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="META domain-containing protein"
                     /protein_id="HET9010602.1"
                     /translation="MRNGTAALVVVLSVACASLGRSSTSALVDREWRLVSLHGQPAVP
                     STGMRAAGLRMSGDSLRMSGSGGCNRIGATYTLDGDRLSFGPILATRMACADALLNRQ
                     ETDFLAALQATTRYRIAGDTLILAGAGDDLARLLRAAR"
     gene            1857..2237
                     /locus_tag="VFN38_02260"
     CDS             1857..2237
                     /locus_tag="VFN38_02260"
                     /inference="COORDINATES: protein motif:HMM:NF017935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF983 domain-containing protein"
                     /protein_id="HET9010603.1"
                     /translation="MTPTLGTLVARALRRRCPRCGGGAIWHSWFKMKHACPTCGQVFE
                     RGESHDFFIGAYLINLVVAELSAIVIAAVMWITLGERVSFNVLWGASMALAVIMPVVF
                     YPFSRELWLAFDLHFRPSEAGDMG"
BASE COUNT          317 a          838 c          870 g          379 t
ORIGIN      
        1 cgcgaaacgg gaggcgatcg cggcgacgct gacacgcgga cggtttggac ggggagcagc
       61 catgacccgt aacctacccg gaattcctcc cgaacgatcc ccgggacgcg gtcggggtat
      121 ccatcgggtg cttggtgacg caggatacgg cacggttcgt gtcgtcggtg ctttgtgcgc
      181 gtcgtccagc tcgtcccgtt cccgcgcccc gtggtccatg caggagcccg tagaagcccc
      241 cacgcccgaa gcgctcgccg acctcgtcgc gcgctgcgat cagatcaacc ggttcgagac
      301 gcaactgacc tccgcggagg aggcgcgcat cgcggcgctg gcttccggga tcctcgtgat
      361 gcgccaggtg ctcgagctgc cggcgctggc ggcggaggac cttccgcctc ggcaggcccg
      421 gattcagcac tgggcgctca cggcgggcca cctgaaggag gcggagacgc cggcgatcca
      481 cgccgtgcgg gggctcttcg tgctcgacga gcacgagcag gtgaaggtgc tcgtggaccg
      541 cacctggcgg ggccagtggc gctcggtcac gctgtggaag aacggagagc tgggcgtttc
      601 ggcggcggcg atgctcgagt tcctggcgcg gctcactcgt ctggcgcagc agcgggcgcc
      661 cgacgtggcg cgcgcgctgc tcatccgcag ccaggccgtg gcggccacgc acggactgct
      721 ggccgtgggt ccgcggcagc gaggcggcta gcggccgctc actcgggcag cgtcgcgagc
      781 agctccacgc agtacgccgc caacgactcg ctgtcgaatt cgcgcccgtc gctggagcgc
      841 cagacggacg actccgcgac gctctccatc ggatggagta ccagctcgct ggcgacgacc
      901 gcacccttga ccggccgcgc agcgccgcgg cgagtgacgg tgccgtgcca gagcaccacc
      961 tgcagctcac cgagcgtgag ctcctccgag gtgtcggcga accacgacac gctcagcgcg
     1021 cggttggacg cctggaggac gcagccgctc ggcgtgcgat gctgctcgat ctgcatcggc
     1081 ggcgcctcgc cccggcggag cgccttctcg ggcgcgagct cgtcgagcag gcgctcgacg
     1141 ttgcgctgca ccgcgttgcg ctccttgagc gtcgggggag cgggacgggc cgctctcgtg
     1201 aagttgttcg agcgctccgg gtcgtgcatg gcatgcccca cttgttgatt gtcgggtgca
     1261 ccgtgcaccc actggaaagg tagcgtccgg cgcgcgttcg cgtcgtgcgg gggcatttcg
     1321 ggagccgcca ggcgccacgc ccggtaccgt tcctgcagcc ccgccgacgt gtctcggcac
     1381 tcggttcgca cccctgcccc atcgaccatg aagcatcgtt cgtcacgtcg ccgcgggatg
     1441 cgcaatggca ccgccgcgct cgtcgtggtt ctgtcggtcg cctgcgcctc gctcggccgg
     1501 tcgtcgacgt ccgcgctcgt ggaccgggag tggcggctcg tctccctgca cggacaaccc
     1561 gcggtgccca gcaccgggat gcgcgcggcg ggcctgcgga tgtccggcga cagcctgcgc
     1621 atgagcggct cgggcggctg caaccgcatc ggcgcgacct acacgctcga cggggatcgc
     1681 ctctccttcg ggccgatcct ggcgacgcga atggcctgcg ccgacgcgct gctgaaccgg
     1741 caggagacgg acttcctggc ggcactccag gcgacgacgc gctaccgcat cgccggggac
     1801 acgctcatcc tcgccggggc gggtgatgac ctcgcgcgcc tgctacgggc ggcgcggtga
     1861 cgccgacgct cggcacgctc gtggcccgcg cccttcgccg gcgctgcccc cgctgcggcg
     1921 gcggcgcgat ctggcactcg tggttcaaga tgaagcatgc gtgcccgacg tgcggccagg
     1981 tattcgaacg cggcgaatcg cacgacttct tcatcggcgc gtacctgatc aatctcgtcg
     2041 tcgccgagct gagcgcgatc gtcatcgccg ccgtcatgtg gatcacgctc ggggagcgcg
     2101 tgtcgttcaa cgtgctgtgg ggcgcctcga tggcgctggc ggtgatcatg cccgtcgtct
     2161 tctatccctt ctcgcgcgag ctgtggctcg cgttcgacct gcatttccgg ccgagcgaag
     2221 cgggggacat gggctgaccg gccttacgcg gtcaggcgcg gtagatcgtg acgagcgtgt
     2281 cgtcgaaggc gcggcgggcg gcaccggccg ggaggaggtg cgtggaggcg tgctccacgg
     2341 cgaggatccg cgcgaagcgc gtcttctgcc agctctcgac gatgcggtcc agcatgcgcg
     2401 agcc
//
LOCUS       DASSYW010000141         3163 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_678376, whole genome shotgun sequence.
ACCESSION   DASSYW010000141 DASSYW010000000
VERSION     DASSYW010000141.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3163)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3163)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3163
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_678376"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..766
                     /locus_tag="VFN38_02265"
     CDS             <1..766
                     /locus_tag="VFN38_02265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010604.1"
                     /translation="TFNNDGTKILFSDEWGGGGQPKCRATDRREWGADAIFSLVNGRM
                     EFQNYYKLPAPQTVNENCVAHNGSLIPIPGRDVLVQAWYQGGISVFDFTDAKHPREIA
                     FFDRGPVDSTHMAMGGSWSVYWYNGVIVSSEIARGLDVFELAPSAFISQNEIDAAKSV
                     HLDYLNTQGQPKFVWPASFAVARSYVDQLARWNGLGGGRISAIRQALASAEGMSGAQR
                     QAALNALATQIDADANGSSDAARVRMLAGAVRDLAK"
     gene            complement(933..1817)
                     /locus_tag="VFN38_02270"
     CDS             complement(933..1817)
                     /locus_tag="VFN38_02270"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HET9010605.1"
                     /translation="MTTTFIGLVGRLGALSVLAAVPLIAQAPRLTVAPEHPLPGALVT
                     LTLHDAADARDTIVAIRGRMAGEPLHFEARRGEHRAIGAMPVDTSTRVAAHLLVSRAS
                     GRTDSVNVVIELPPLPPPTEQLAVAPRFGRPLDAATEARVARENARALAVGRRAHDSP
                     RRWTAPFARPRDSAISSEFGAGRTFNGAVTSRHLGVDFRGAVGSPVRAANAGVVALVD
                     RFFLGGRVVYIDHGDGIVTGYLHLSKTLVRPGDSVKRGQTIGLVGATGRVTGPHLHWT
                     ARYGALTVNPLDLEAVTR"
     gene            complement(1829..2047)
                     /locus_tag="VFN38_02275"
     CDS             complement(1829..2047)
                     /locus_tag="VFN38_02275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010606.1"
                     /translation="MRPRPFAVDRTDRSCPRCFVELADGSVGVVDRKTLHHERTIRLG
                     GSPRYIAFDAKGTLAVIPNEAGWVSVVH"
     gene            complement(2062..2994)
                     /locus_tag="VFN38_02280"
     CDS             complement(2062..2994)
                     /locus_tag="VFN38_02280"
                     /inference="COORDINATES: protein motif:HMM:NF025679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4382 domain-containing protein"
                     /protein_id="HET9010607.1"
                     /translation="MRTVLFATWLGLCAATVTSCDRGAAAPASGTTRTLLTDDPFPYS
                     RVASVDLFIVSVSASVSPDTGASGAGGFVTLATPNRRINVLGLQHGLTEELGTAALPT
                     GAITAVKLVIDTDRSSITLKSGAVLTGSSTPGIHWQSSAGRPALNALLHENILVPDTG
                     AVVVVDYDVGQAFIAPQEIDPTSTDSGFIFSPVLRATDATRTGSIAGVVRAHSATGSA
                     VENASLRLYLGTPGTPENTWPMLATAKTDATGAFRFAYVTRSSYWAAIPIHAGKSYIV
                     AVDPPAGSGLGRTLVPNLSVAPRVETAVGTVVLP"
BASE COUNT          480 a         1123 c         1102 g          458 t
ORIGIN      
        1 caccttcaac aacgacggca ccaagatcct gttcagcgac gagtggggcg gcggcggcca
       61 gccgaagtgc cgcgcgaccg atcgccggga gtggggcgcc gacgcgatct tctcgctcgt
      121 gaacggcagg atggagttcc agaactacta caagctgccc gccccgcaga cggtgaacga
      181 gaactgcgtc gcgcacaacg ggtcgctcat ccccatcccg gggcgcgacg tgttggtgca
      241 ggcgtggtac cagggcggca tctcggtgtt cgacttcacc gacgcgaagc atccgcgcga
      301 gatcgccttc ttcgatcgcg gcccggtgga ctccacgcac atggccatgg gcggctcgtg
      361 gtcggtgtat tggtacaacg gcgtgatcgt gagctccgag atcgcccgcg ggctcgacgt
      421 cttcgagctc gccccgagcg cgttcatctc gcagaacgag atcgacgcgg cgaagtcggt
      481 gcacctcgac tacctcaaca cgcaggggca gccgaagttc gtgtggccgg cgagcttcgc
      541 cgtggcgcgg tcgtacgtgg atcagctcgc gcggtggaac gggctcggcg gcggccgcat
      601 ctcggccatc cgtcaggctc tggcgagcgc cgagggcatg tcgggcgcgc agcgccaggc
      661 tgcgctcaac gcgctggcca cgcagatcga cgccgacgcg aacggctcca gcgacgccgc
      721 tcgcgtgcgc atgctggcgg gcgcggtgag ggatctggcg aagtaacgat cgcccgatgg
      781 cccgatggcc cgatggcccg atggcccggt ggcccgatag cccggtggcc cgatagcccg
      841 atggcccgaa tgcccggtca gtgccgagcg ttcgggccat cggtccgtca ggcctccggg
      901 cctccgggcc tccgggcctc cgcgcctccg ggctatcgcg tcacggcctc gagatccagc
      961 ggattcaccg tcagcgcgcc gtagcgcgcc gtccagtgca ggtgcggtcc cgtgacgcga
     1021 ccggtggcgc ccaccagacc gatcgtctgg ccgcgcttca ctgagtcgcc cggtctcacc
     1081 agcgtcttgc tcaggtgcag gtagccggtc acgatcccgt cgccgtgatc gatgtagacc
     1141 acgcgcccgc ccaaaaagaa ccggtccacg agcgccacga cgcccgcgtt ggccgcgcgc
     1201 accggcgagc ccaccgcgcc gcgaaagtcc acgccgagat gccggctcgt cacggcgccg
     1261 ttgaaggtgc gccccgcgcc gaactcgctg ctgatcgccg agtcgcgcgg ccgcgcgaag
     1321 ggtgccgtcc accgacgcgg cgagtcgtgc gcacgacgcc ccaccgccag cgcgcgggca
     1381 ttctctcgcg ccacccgcgc ctcggtcgcc gcgtcgagcg gccgcccgaa ccggggcgcc
     1441 acggcgagct gctccgtggg tggcgggagc ggcggcagct cgatcacgac gttcacgctg
     1501 tccgtgcgcc ccgacgcgcg gctcaccagc aggtgcgccg cgacccgcgt cgaggtgtcc
     1561 accggcatgg caccgatcgc acggtgctcg ccgcgacggg cctcgaagtg cagcggctcg
     1621 cccgccattc gcccacggat ggcgacgatc gtgtcgcgcg cgtcggccgc gtcgtgcagc
     1681 gtcagtgtca cgagcgcgcc cggcagcgga tgctcgggcg ccacggtgag gcggggcgct
     1741 tgcgcgatga gcggcaccgc ggcgagcacg ctgagcgcgc cgagccgacc gacgagcccg
     1801 atgaaggtag tggtcatccc gaagaatact aatggacgac gctgacccag ccggcctcgt
     1861 tcggtatcac cgcgagcgtg cccttcgcgt cgaacgcgat gtaccgcggg cttcccccga
     1921 gccggatcgt gcgctcgtga tgcaacgtct tccggtcgac gacaccgacg ctcccgtcgg
     1981 cgagctcgac gaagcagcgc gggcacgagc ggtccgttct gtccaccgcg aagggtctgg
     2041 ggcgcatcgg gacggctctg tctacggcag aacgaccgtg ccgacggcag tctccactcg
     2101 cggcgccacg ctgaggttcg gcacgagcgt ccgacccagg ccggaacccg cgggtggatc
     2161 cacggcgacg atgtagctct tgcccgcgtg gatcgggatc gccgcccagt aggagctgcg
     2221 cgtgacgtac gcgaagcgga atgcgccggt cgcgtcggtc ttcgccgtcg ccagcatcgg
     2281 ccaggtgttc tcgggggtgc cgggggtccc gagatacagc cggagcgacg cgttctccac
     2341 cgcgctcccc gtggccgagt gcgcgcgcac cacaccggcg atggagccgg tgcgcgtggc
     2401 gtcggtcgcg cgcagcacgg gggagaagat gaagccgctg tccgtgctcg tgggatcgat
     2461 ctcctgcggc gcgatgaacg cctgccccac gtcgtaatcc accaccacga cggcacccgt
     2521 gtcgggcacg aggatgttct cgtgcagcag cgcgttcagc gcggggcggc cggcactgga
     2581 ctgccagtgg atgcccggcg tggagctccc ggtgagcacg gcaccgctct tcaacgtgat
     2641 gctcgagcga tcggtgtcga tcacgagctt caccgcggtg atggcgcccg tgggcagcgc
     2701 cgcggtcccc agctcctcgg tgagtccatg ctgcaggccg agcacgttga tgcgtcggtt
     2761 gggcgtggcc agggtgacga agccgcccgc ccccgaggct cccgtgtccg gcgacaccga
     2821 cgccgacacg ctcacgatga acagatccac cgacgccacg cggctgtacg ggaagggatc
     2881 gtcggtgagc agcgtgcggg tcgtgccgct cgctggtgcc gcggcacctc ggtcgcagct
     2941 cgtcaccgtc gccgcgcaca accccagcca cgtcgcaaac aaaacagtgc gcatccggct
     3001 cacctccgtc tggacaatat gcggccttga ccatcatgcc gcccgatcac cgcaagatca
     3061 acgacgattg gtcgctctgt catccgcatg agcgccgaag gcgcgaatgt cgggatctac
     3121 cgtccattcg agtggctggt cacgtcgcag tgaagctgga tcc
//
LOCUS       DASSYW010000142         2496 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_604133, whole genome shotgun sequence.
ACCESSION   DASSYW010000142 DASSYW010000000
VERSION     DASSYW010000142.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2496)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2496)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2496
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_604133"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1178)
                     /locus_tag="VFN38_02285"
     CDS             complement(<1..1178)
                     /locus_tag="VFN38_02285"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HET9010608.1"
                     /translation="MRAGRSFAVVLGVALLSVASAAQTPAPLRPIQFTDTRLANGLRV
                     IISEDRFAPVYAIAVSYGVGSKDERPGRTGFAHLFEHMMFKGSDNVGPGEHFFLVFNY
                     GGSMNGTTNTDRTLYFEVMPRNQLDLGLFLESDRMRSLAITKENLDNQRQAVQEERRL
                     RLDNQPYGKSQERFNELAYDNPAYHHSVIGSMEDLNAATVDDVASFFRTYYAPNNAVV
                     AIVGDLDAKATLAKVEKYFGDIPRQPSPAPVDLSEPEMKAERRETIPDRLARLAQINI
                     GYKIPNATHADYPALAALGQILGAGESSRLYQRLVKTQELCANVGSGSGQRMGPALFT
                     ITCAVRPGKNIAEAETAITEEVARLHTGAVTADELQRVRSTARRQAVSIRESALARAQ
                     S"
     gene            complement(1213..>2496)
                     /locus_tag="VFN38_02290"
     CDS             complement(1213..>2496)
                     /locus_tag="VFN38_02290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010609.1"
                     /translation="PRAGVKTGGDDEPAERSRRSVDRPRPQIPRALWIGAGTVAALIV
                     AVLLLMRFGGGLGGGQPSPTTSASDKPALALGAMLASGGDPLTGGVDYQVFEAAQNAA
                     GERKRVAGSSTYNGPPRFPLPPGRYYVTAAVGAAKASTEVVVSDKTLVQQRLVLHAGV
                     LRPVAHLTASAPPLDSGVSYDVFDAAVDAEGNRKRVAGSPDYNGPPRFTLPAGRYFVS
                     AQYGSASTSQEVEIGDGDNRALALDLKAGVLLPSAVLSDGSKPLESGVAYAIDDAAKD
                     VEGRARRVASSPDYSGPPRLPLPAGRLTVTATHGKAMARVDINLAPGEIKKLVLNLHA
                     GILRLSSTGPAGQTLATGVNYEVYEAVKDAEGKRMRITTSPNYAGPPSFQLPRGRYYV
                     TASAAVGTAEAEVDVPEGVMTPVTLKLARSGQNSR"
BASE COUNT          353 a          836 c          875 g          432 t
ORIGIN      
        1 gactgcgccc gcgcgagcgc gctctcgcga atgctcaccg cctggcggcg cgccgtactc
       61 cgcacgcgct gcagctcgtc ggcggtgacg gcgccggtgt gcaggcgcgc cacttcctcg
      121 gtgatggccg tttcggcctc cgcgatgttc ttgcccggcc gcaccgcgca cgtgatggtg
      181 aagagcgccg gccccatgcg ctgcccgctg cccgagccga cgttggcgca cagctcctgc
      241 gtcttgacca gccgctgata cagccgcgag ctctcgccgg cgccgaggat ctggcccagc
      301 gcggcgagcg ccgggtagtc ggcgtgagtg gcgttcggga tcttgtagcc gatattgatc
      361 tgcgccaggc gcgccagccg atccgggatc gtttcgcggc gctcggcctt catctccggt
      421 tccgagagat caaccggcgc ggggctcggc tgacgcggga tgtcgccgaa gtacttctcg
      481 actttcgcca gcgtggcttt cgcgtcgagg tcgccgacga tggccaccac ggcgttgttg
      541 ggcgcgtagt aggtgcggaa gaagctcgcc acgtcgtcca cggtggccgc gttcagatcc
      601 tccatcgagc cgatgacgga gtggtggtac gccgggttgt cgtaggccag ctcgttgaag
      661 cgctcctggc tcttgccgta cggctgattg tccaggcgca gccggcgctc ttcctgcacc
      721 gcctgccgct ggttgtccag gttctccttg gtgatggcga gcgagcgcat gcgatcgctt
      781 tcgaggaaga gcccgaggtc cagctgattc cgcggcatca cttcgaaata gagcgtgcgg
      841 tcggtgttgg tggtgccgtt catcgacccg ccgtagttga acaccaggaa gaagtgctca
      901 ccaggaccga cgttgtcgga ccccttgaac atcatgtgct cgaagaggtg cgcgaacccg
      961 gtgcggccgg ggcgctcgtc cttcgacccg acgccgtagc tcacggcaat cgcgtagacc
     1021 ggcgcgaagc gatcttccga gatgatcacg cgcaggccgt tggcgagccg tgtgtcggtg
     1081 aactggatcg ggcgcagggg agccggcgtc tgggcggcag acgccaccga cagcaacgca
     1141 acgcccagga ccaccgcgaa cgaacggcca gcgcgcatcg aaacctccca gactgagacg
     1201 gggtggccca gcttatcgtg aattctgccc gctacgagcc agcttgagcg tgaccggggt
     1261 catgacgcct tcgggcacgt cgacctctgc ttcagccgtc ccgacagccg cggacgccgt
     1321 tacgtaatag cggccgcgcg ggagctggaa gctcggtggt cccgcgtagt tcgggctggt
     1381 agtgatgcgc atgcgcttgc cctccgcgtc tttcacggcc tcgtagactt cgtagttgac
     1441 gccggtggcg agcgtttggc cggcggggcc cgtgctggag agccgcagga ttcccgcgtg
     1501 caggttgagc accagcttct tgatttcacc gggcgcaaga ttgatgtcga cgcgggccat
     1561 ggctttgccg tgtgtggcgg tgaccgtgag cctcccggcc ggcagcggca gacgcggcgg
     1621 gcccgagtag tcgggactgc tggctactcg cctggcgcgc ccttccacgt cctttgccgc
     1681 gtcgtcgatt gcataggcga cgccgctctc gagcggcttg gagccgtcgc tcaacacggc
     1741 cgacgggagc agtacgcccg ccttcagatc gagcgcgagc gccctgttgt cgccgtcgcc
     1801 gatctcgact tcctgagacg tggatgcgct gccgtactgt gctgacacga agtaccggcc
     1861 ggccggaagg gtgaagcgag gcggaccgtt gtagtcgggg ctgcccgcca cacgcttgcg
     1921 gttgccttcc gcgtcgaccg cggcatcgaa cacgtcgtag ctcacgccgc tgtcgagcgg
     1981 cggcgccgac gcggtcaagt gcgcaaccgg tctcagcacg ccggcgtgca gcaccagccg
     2041 ctgctggacg agcgtcttgt ccgacaccac gacttcagtg gaggccttcg cggcgccgac
     2101 ggccgcggtg acgtagtagc gccccggcgg cagcgggaag cggggcggac cgttgtaggt
     2161 ggagctcccc gcgactcgct tgcgctcgcc cgccgcgttc tgcgccgctt cgaacacctg
     2221 gtagtcgacg ccgcccgtga gtgggtcgcc gccgctcgcg agcatggctc cgagcgcgag
     2281 cgccggtttg tccgatgcgc tggtcgtcgg cgatggttgt ccaccgccga ggccgccgcc
     2341 gaaacgcatc agcagcagca cggcaacgat cagcgcggcg acggtgcccg cgccaatcca
     2401 cagcgcgcga ggtatctggg gccggggccg gtctacagac cggcggctgc gttcggcggg
     2461 ctcgtcgtcg ccgccggtct tcacaccggc ccgagg
//
LOCUS       DASSYW010000143         2389 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1672747, whole genome shotgun sequence.
ACCESSION   DASSYW010000143 DASSYW010000000
VERSION     DASSYW010000143.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2389)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2389)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2389
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1672747"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1761)
                     /gene="glmS"
                     /locus_tag="VFN38_02295"
     CDS             complement(<1..1761)
                     /gene="glmS"
                     /locus_tag="VFN38_02295"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004360 - glutamine-fructose-6-phosphate
                     transaminase (isomerizing) activity [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HET9010610.1"
                     /translation="MCGIVGYIGDKQATGLLVDGLKRLEYRGYDSAGLSLMNGGGLET
                     RKAKGKIAMLEKAIDSDPIHGMVGIAHTRWATHGPPNECNAHPHHDCKGRISVVHNGI
                     IENYGPLRATLTKTGHTFVSETDTEVLAHLVEAAFDGNLEDAVVDALALVEGTYGIAV
                     ISSDDPDKIVAARKGSPLLIGIGEGENYVASDVAAILAHTRQVVYLDDGEMAILTRDG
                     YRVCDLNQQTVKKRVSRIDWDLDQIEKGGYDHFMLKEIMEQPQTIQNTMRGRLVTEEG
                     FSKLGGLNLTMDELQNLDQIIITACGTSWHSALIGELMIEEHARIRCEVEYASEFRYR
                     NPIVSDKTLCVVISQSGETADTLAAMREAKRRGAKTLGLVNQVGSTIAREDDGGIYLH
                     AGPEIGVASTKAFTSQVIALALLTLKLARLRNMSVVQGREIAQAMEALPEQIQSILDR
                     AAEVERIADAFADATNFLYLGRGYNFPVALEGALKLKEISYIHAEGYPAAEMKHGPIA
                     LIDADMPVVFIAPHDSVFEKVVSNVQEVKARGGRVIAITSREEPSLEGKIDYEFRIPQ
                     TIDMLNPVLAAIPLQLLAYYI"
     gene            complement(1808..>2389)
                     /locus_tag="VFN38_02300"
     CDS             complement(1808..>2389)
                     /locus_tag="VFN38_02300"
                     /inference="COORDINATES: protein motif:HMM:NF014879.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010611.1"
                     /translation="EDYTLALAARVVLRHRRGPLVTNLSTSLVVEDAAREAGVEAVRA
                     PVGEVNVAVRMRELSAPIGGEGNGGVILPEVHLGRDAPIGAALVLQLLLEEGRALSAI
                     VASLPRYVIVKDKLPRPKASLDAVYAALRSAFPDAAADVQDGLRLAWPDRWVHVRPSG
                     TEPIVRVIAEAPDEPGARELVRRSRVPLDALGG"
BASE COUNT          333 a          883 c          765 g          408 t
ORIGIN      
        1 gatgtagtac gcgaggagct ggagggggat cgccgcgagc accgggttca gcatgtcgat
       61 cgtctgcggg atgcggaact cgtagtcgat cttcccctcg agcgacggct cctcgcggct
      121 cgtgatggcg atcacgcggc cgccgcgcgc cttcacctcc tgcacgttcg acacgacctt
      181 ctcgaacacc gagtcgtgcg gggcgatgaa caccaccggc atgtcggcgt cgatcagggc
      241 gatcggcccg tgcttcatct ccgccgccgg atagccctcg gcgtggatgt agctgatctc
      301 cttgagcttg agcgcccctt ccagcgcgac cgggaagttg tagccgcgcc ccaggtacag
      361 gaagttcgtg gcgtcggcga acgcgtcggc gatccgctcc acctccgccg cccggtcgag
      421 gatgctctgg atctgctccg gcagcgcctc catcgcctgg gcgatctcgc gtccctgcac
      481 caccgacatg ttccggaggc gcgccagctt gagcgtcagc agcgccagcg cgatcacctg
      541 gctggtgaac gccttggtgg aggcgacgcc gatctcgggg ccggcgtgca ggtagatgcc
      601 gccgtcgtcc tcgcgcgcaa tcgtcgagcc cacctggttc accagcccca gcgtcttcgc
      661 gccgcggcgc ttcgcctcgc gcatcgccgc cagggtgtcc gccgtctccc ccgactgcga
      721 gatcacgacg cacagcgtct tgtcggagac gatgggattg cgatagcgga actccgacgc
      781 gtactccacc tcgcagcgga tgcgcgcatg ctcctcgatc atcagctcgc cgatcagcgc
      841 gctgtgccag ctcgtgccgc aggcggtgat gatgatctgg tcgaggttct gcagctcgtc
      901 catcgtgagg ttcaggccgc cgagcttgga gaacccctcc tcggtgacga ggcggccgcg
      961 catcgtgttc tggatcgtct gcggctgctc catgatctcc ttcagcatga agtggtcgta
     1021 gccgcccttc tcgatctggt cgagatccca gtcgatccgg ctgacccgct tcttcaccgt
     1081 ctgctgattg aggtcgcaca cgcggtatcc gtcgcgcgtg aggatcgcca tctcgccgtc
     1141 gtccaggtac accacctggc gcgtgtgggc gaggatcgcc gccacgtcgc tggcgacgta
     1201 gttctcgccc tcgccgatgc cgatcagcag cgggctcccc ttccgcgcgg ccacgatctt
     1261 gtccgggtcg tcggacgaga tcacggcgat cccgtacgtc ccttccacga gggcgagggc
     1321 gtccaccacc gcgtcctcga ggttgccgtc gaacgccgcc tccacgaggt gcgcgagcac
     1381 ctcggtgtcg gtctccgaca cgaaggtgtg gcccgtcttc gtcagcgtcg cccgcagggg
     1441 gccgtagttc tcgatgatcc cgttgtggac cacggagatc cggcccttgc agtcgtgatg
     1501 cgggtgcgcg ttgcactcgt tcggcggccc gtgggtcgcc cagcgggtgt gggcgatgcc
     1561 caccatgccg tggatcggat cgctgtcgat cgccttctcc agcatggcga tcttcccctt
     1621 cgccttccgc gtctcgaggc cgcccccgtt catcagcgac aggccggcgg agtcatagcc
     1681 gcgatactcg aggcgcttca gcccgtccac cagcaggccc gtcgcctgct tgtcgccgat
     1741 gtacccgaca attccgcaca tgtgttgcct tcctcgaaaa agagagagcg tcctcgttcg
     1801 ccgcgggtca gccgcccagc gcgtccagcg gcacacgcga ccggcgcacg agctcgcgcg
     1861 ccccgggctc gtccggcgcc tcggcgatca cccgcacgat cggctcggtt cccgacggac
     1921 ggacgtgcac ccaccggtcc ggccaggcga gccggagccc gtcctgcacg tccgccgccg
     1981 cgtccggaaa cgccgaacgg agcgcggcat acaccgcgtc caggctcgcc ttcgggcgcg
     2041 gcagcttgtc cttcacgatc acgtagcggg ggagcgacgc cacgatcgcc gacagggccc
     2101 gcccctcctc caggagcaat tgcagaacca gggccgcacc gatcggtgcg tcgcgcccca
     2161 ggtggacctc ggggaggatg acccccccgt tcccctcccc gccgatgggg gccgagagct
     2221 cccgcatccg caccgcgacg ttcacctcgc caaccggcgc gcgcaccgcc tccacccccg
     2281 cctcgcgggc cgcgtcctcc accacgaggc tcgtggagag gttcgtcacg agcggccccc
     2341 gccggtgccg cagtaccacc cgcgcggcga gcgcgagcgt gtagtcctc
//
LOCUS       DASSYW010000144         2431 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_106941, whole genome shotgun sequence.
ACCESSION   DASSYW010000144 DASSYW010000000
VERSION     DASSYW010000144.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2431)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2431)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2431
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_106941"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1695)
                     /locus_tag="VFN38_02305"
     CDS             complement(<1..1695)
                     /locus_tag="VFN38_02305"
                     /inference="COORDINATES: protein motif:HMM:NF012907.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HET9010612.1"
                     /translation="MDRRLTPIFIDRTGRRWQRIRRVALVFGVMTTIIGLVLVATVAL
                     WPPMPPQLPLAVANNLPIARATSGKPGSFTRIDRLRVAYRRKLAAAIKQRGSPPSRPP
                     EAIPALNVGSGQRPTRTSSIVAGFFVNWDDNSFASLKRNYDKLDWVIGEWAFISADAD
                     SLHLRVKPEVVELLNSRPAEERPSLFIMISNFAVEPGADSARGRFDPAAVRAFLDNPV
                     ARANAVRQLRAAVQRYGLAGTTLDMESFEPGVQPAVLAFARELHDAMHGMGKLATQAV
                     ATGESDAYIRRAAAANDHLLPMLYDEHYGAGDPGPIASQRFYVTQARRFARLVSPTKL
                     VLTVGAYGYDWNDAEAIVNHQAELYSFQETMRAARGATQPRPHFDPVSLNPYLQWTDP
                     DSTDHLLWYLDGTTMYNAMEAGHALGVAGHAIWRLGSEDPSIWNALGRHGTMVSADSL
                     QRIPPGYDAEFDGTGEILQITFFPQEGERNLRIDPASGWITGQTLVKVPVPYVLARTG
                     GQRRNAHRVALTFDDGPDPRWTPMILDTLRSRGVKATFFVIGQNVDTHQRLLKREYD"
     gene            complement(1783..>2431)
                     /locus_tag="VFN38_02310"
     CDS             complement(1783..>2431)
                     /locus_tag="VFN38_02310"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HET9010613.1"
                     /translation="LVAIGNEGLLKAVRKFDPDQGVKFISYAVWWVRQAVLKALAEQT
                     RSVRIPLNQNSQLIRLARAETILAQVLKRDPTENEISRLLEETPEAVRAAKQMSSTEV
                     SLDAPIDRSDREASTLGERFAGVDGTEIEDVTDYKLMKEFIERVFRKYLTPRERKILF
                     LYYGLDESGEPMTLEKIGALMGVTRERIRQIRERAFEKLRESPDGRALAGFWQAA"
BASE COUNT          352 a          818 c          872 g          389 t
ORIGIN      
        1 gtcgtactcg cgcttcagca gccgctgatg cgtatcgacg ttctggccga tcacgaagaa
       61 cgtcgccttc acgccgcgcg agcgcagcgt gtcgaggatc atcggcgtcc agcgcgggtc
      121 tgggccgtcg tcgaaggtga gcgccacgcg atgcgcgttg cggcgctgcc cgccggtgcg
      181 cgccagcacg tacggcaccg gcaccttcac gagcgtctgg ccggtgatcc accccgacgc
      241 cgggtcgatc cgcaggttgc gctcaccctc ctgcgggaag aaggtgatct ggaggatctc
      301 cccggtgccg tcgaactcgg cgtcgtagcc cggcgggatg cgctgcaggc tgtcggcgga
      361 caccatcgtg ccgtgccggc cgagcgcgtt ccagatggag ggatcctcgg atccgagccg
      421 ccagatggcg tggccggcga cgccgagcgc gtggcccgcc tccatggcgt tgtacatcgt
      481 ggtgccgtcg aggtaccaga gcaggtggtc ggtggagtcc gggtccgtcc actgcaggta
      541 ggggttgagc gacaccggat cgaagtgcgg ccgcggctgc gtggccccgc gcgcggcgcg
      601 catcgtttcc tggaagctgt acagctccgc ctggtggttg acgatcgcct cggcgtcgtt
      661 ccagtcgtac ccgtaggcgc cgacggtgag caccagcttg gtgggcgaca cgagccgcgc
      721 gaagcgccgg gcctgcgtga cgtagaagcg ctggctggcg atcgggcccg gatcgccggc
      781 gccgtagtgc tcgtcgtaga gcatcggcag caggtgatcg ttcgccgccg cggcgcgccg
      841 gatgtaagcg tcggactcgc ccgtggcgac cgcctgcgtg gcgagcttcc ccatgccgtg
      901 catcgcgtcg tgcagctcgc gcgcgaaggc gagcacggcg ggctgtacgc cgggctcgaa
      961 gctctccatg tcgagcgtcg tgccggcgag gccgtatcgc tgcacggcgg cgcggagctg
     1021 gcgcacggca ttcgcgcgcg ccaccggatt gtcgagaaag gcgcgcaccg ccgcgggatc
     1081 gaacctgccg cgcgccgagt cggcgcccgg ctctacggcg aagttgctga tcatgatgaa
     1141 cagcgacggg cgctcctccg ccggccggct gttcagcagc tcgaccacct ccggcttcac
     1201 ccgcaggtgc agcgaatcgg cgtcggcgga gatgaacgcc cactcgccga tgacccagtc
     1261 cagcttgtcg tagttccgct tgagcgaggc gaacgagttg tcgtcccagt tcacgaagaa
     1321 cccggcgacg atggagctcg tgcgggtggg ccgctgcccg ctgcccacgt tgagggccgg
     1381 aatggcctcg ggcgggcgcg acggcggcga tccgcgctgc ttgatggccg ccgccagctt
     1441 ccgccgatag gcgacgcgaa gccggtcgat gcgcgtaaag gaccccggct tccccgacgt
     1501 ggcccgggcg atcggcagat tgttcgccac cgccagcggc agctgcggcg gcatcggcgg
     1561 ccagagcgcg acggtcgcca cgagcaccag gccgatgatc gtcgtcatca ctccgaacac
     1621 gagggcgacg cggcggatcc gctgccagcg ccgccccgtg cggtcgatga agatgggggt
     1681 gagtcgtcgg tccatggtca caataaagtt accagccgga cgaaaacggc ggggcggaga
     1741 tggtgctctc cgccccgccg ctcgttcgga ccgcccggac gactatgccg cttgccagaa
     1801 ccccgcgagc gcccggccat cgggggactc gcgcagcttc tcgaaggcgc gttcgcggat
     1861 ctggcggatg cgttcgcgcg tcacgcccat gagcgcgccg atcttctcga gcgtcatcgg
     1921 ctcgccgctc tcgtcgaggc catagtacag gaagaggatc ttccgctcgc gcggcgtgag
     1981 atacttccgg aacacgcgct cgatgaactc cttcatgagc ttgtagtcgg tcacgtcctc
     2041 gatctcggtg ccgtcgacgc cggcgaagcg ctcgcccagc gtggacgctt cccggtccga
     2101 ccgatcgatc ggggcgtcca gcgagacttc ggtgctggac atctgcttgg ccgcgcgcac
     2161 cgcctcgggc gtctcctcca gcaggcggga gatctcgttc tcggtggggt cgcgcttgag
     2221 gacctgggcc aggatcgtct cggcgcgcgc gagacggatg agctgggagt tctggttgag
     2281 cgggatgcgc acgctgcggg tctgctcggc gagcgccttg aggacggcct ggcgcaccca
     2341 ccacacggcg taggagatga acttcacccc ctggtcggga tcgaacttgc ggaccgcctt
     2401 gagcagtccc tcgttcccga tggcgacgag c
//
LOCUS       DASSYW010000145         2379 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_622795, whole genome shotgun sequence.
ACCESSION   DASSYW010000145 DASSYW010000000
VERSION     DASSYW010000145.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2379)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2379)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2379
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_622795"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1724)
                     /locus_tag="VFN38_02315"
     CDS             complement(<1..1724)
                     /locus_tag="VFN38_02315"
                     /inference="COORDINATES: protein motif:HMM:NF039587.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5916 domain-containing protein"
                     /protein_id="HET9010614.1"
                     /translation="MRLIVAPALLLGAIALPAQSPSRPAQPVSPPRVVQAARRSGPID
                     IDGRLDESAWAAAEPTGRFVQSYPAPGVLAADSTQVRILYDDQSLYVGIRMFDAHPDS
                     IVGGLARRDATAATGIYSDWVHLIIDSYHDRRTAFRFSTTPRGVQKDVYTYNDGSEDL
                     NWDAVWEVGTRVDSVGWVAEYRIPLSQLRFGGDSASGRVWGFQVQRDIARRNERDTWA
                     PWTPQDGAFVSRFGDLTGLQGIRVPERLEITPYVSSTLTRAPGDAADPFYDHTHNKPS
                     AGGDVRYGLPGGLTLSATVNPDFGQVEVDPAVVNLSAFETSFPEKRPFFLEGSDVFSF
                     GQVVRQNDYGGQTYLYSRRIGRQPQLGLPSGTLYADMPRQTTIAGAAKVTGKSGPWTV
                     GILDAVTTEQRARVVTTTGLRYERPVEPLTNYFAGRVKRDFRGGATTVGAMLERTSRA
                     VGDTTFAPLLRSDATFGGIDFEHDMNKRTWIASGFVAGSRVQGSPQAIAATQRTSTHY
                     FQRPDSSLLHLSYDPTRTSLSGVIAELALAKQGATFGSIAVKTSSPGLELNDLGLQGR
                     TGYSAISTL"
     gene            complement(1878..1950)
                     /locus_tag="VFN38_02320"
     tRNA            complement(1878..1950)
                     /locus_tag="VFN38_02320"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1915..1917),aa:Lys,seq:ttt)
     gene            2038..>2379
                     /locus_tag="VFN38_02325"
     CDS             2038..>2379
                     /locus_tag="VFN38_02325"
                     /inference="COORDINATES: protein motif:HMM:NF012958.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase-fold protein"
                     /protein_id="HET9010615.1"
                     /translation="MSDAPETGIEHTLTGDVRTHERFRSRYLEHERTIIVYLPPAYDP
                     QTADRYPVLYLHDGQNVFDRATSIGEEWHVDEVAQALITAGEIEPLIVVGIYNTGIHR
                     IDEYTPTRSADG"
BASE COUNT          359 a          806 c          853 g          361 t
ORIGIN      
        1 agcgtggaga tggcgctgta gccggtgcgg ccctggaggc cgagatcgtt gagctccagc
       61 ccggggctcg acgtcttcac ggcgatggag ccgaaggtcg ccccctgctt cgcgagcgcg
      121 agctcggcga tgacgccgct gagcgaggtg cgcgtggggt cgtagctgag gtgcagcagc
      181 gacgagtcgg gacgctggaa gtagtgggtg ctcgtgcgct gcgtggccgc gatcgcctgt
      241 gggctcccct gcacccggct tccggcgacg aatccgctgg cgatccaggt gcgcttgttc
      301 atgtcgtgct cgaagtcgat cccgccgaag gtggcgtccg accgcagcag tggcgcgaag
      361 gtggtgtcgc ccaccgcgcg actcgtgcgc tcgagcatcg cgccgacggt cgtggcgccg
      421 ccgcggaagt cgcgcttcac ccggccggcg aaatagttgg tgagcggctc cacgggacgc
      481 tcgtaccgga ggccggtcgt cgtcaccacg cgggcacgct gctcggtggt cacggcgtcg
      541 aggatcccca ccgtccacgg tccgctcttg cccgtcacct tcgccgcacc ggcgatcgtc
      601 gtctggcgcg gcatgtcggc gtagagcgtg ccgctcggca gcccgagctg cggctggcgg
      661 ccgatgcgac gcgagtacag ataggtctgg ccgccgtagt cgttctgccg aaccacctgg
      721 ccgaagctga acacgtcgct cccctcgagg aagaagggac gcttctcggg gaacgacgtc
      781 tcgaacgcgc tcaggttgac gacggcggga tccacctcga cctggccgaa gtcgggattc
      841 accgtcgcgc tcagcgtgag cccgccgggc aatccgtacc ggacgtcgcc gcccgccgac
      901 ggcttgttgt gcgtgtggtc gtagaacggg tcggccgcgt cgcccggcgc gcgggtgagc
      961 gtggagctca cgtacggcgt gatctccagc cgctcgggca cgcgaatccc ctggagaccg
     1021 gtcaggtcgc cgaagcgcga cacgaaggcg ccgtcctgcg gcgtccacgg cgcccacgtg
     1081 tcgcgctcgt tgcgccgtgc gatgtcgcgc tgcacctgga atccccacac gcggccgctc
     1141 gccgagtcgc cgccgaagcg cagctggctg agcgggatgc ggtactcggc gacccagccc
     1201 accgagtcca ctcgggtgcc cacctcccac acggcatccc agttgaggtc ctcgctgccg
     1261 tcgttgtagg tgtagacgtc cttctgcacg ccacgcggcg tcgtggagaa gcggaacgcg
     1321 gtccgccgat cgtgatacga atcgatgatc aggtggaccc agtcggaata gattcccgtg
     1381 gccgctgtcg cgtcgcgccg ggccagcccg cccacgatgg agtccgggtg cgcgtcgaac
     1441 atgcggatgc cgacgtacag cgactggtcg tcgtagagga tgcggacctg cgtgctgtcg
     1501 gcggccagca cgccgggcgc cggatagctc tgcacgaacc ggccggtcgg ctcggcggca
     1561 gcccaggcgc tctcgtccag ccgtccgtcg atgtcgatgg ggcccgagcg gcgggcggcc
     1621 tggacgacgc gcggcggcga taccggttgc gcaggccgtg agggtgactg ggccggcagc
     1681 gcgatggcgc cgaggagcag ggcgggggcg acgatgaggc gcatggtggg atgcgggggg
     1741 tcctggtacc gaacgaggtg ggccgacgag gcgttcgggc gactgccgtt ggacaccgcc
     1801 gacctccggt agggttgacg agcggtgcgg ccacaacgga cgagcgccgc tcggtgggtc
     1861 gagcggcgct cctcgcatga ccggagtggg gatcgaaccc acgacctgaa gattaaaagt
     1921 ctcctgctct accaactgag ctatccggtc ggtcgcgtga aaactatcga ttcgccgggc
     1981 gttgcgacac tcgggcgcgc cgccggtggt cccctccttg cacccgcccc acgccatatg
     2041 tccgacgccc ccgagaccgg tatcgagcac acgctcaccg gcgacgtgcg cacgcacgag
     2101 cgcttccgct cccggtatct cgagcacgag cgcacgatca tcgtctacct cccgccggcg
     2161 tacgacccgc agaccgccga ccgctacccc gtgctctacc tgcacgacgg ccagaacgtg
     2221 ttcgatcggg cgacctccat cggcgaggaa tggcacgtcg acgaggtggc gcaggcgctc
     2281 atcacggcgg gggagatcga gcccctcatc gtggtgggga tctacaacac gggcatccat
     2341 cggatcgacg aatacacgcc gacgcgaagc gccgatggc
//
LOCUS       DASSYW010000146         2335 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_272539, whole genome shotgun sequence.
ACCESSION   DASSYW010000146 DASSYW010000000
VERSION     DASSYW010000146.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2335)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2335)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2335
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_272539"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..183)
                     /locus_tag="VFN38_02330"
     CDS             complement(<1..183)
                     /locus_tag="VFN38_02330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010616.1"
                     /translation="MFDSFRQTLRDLMDRATPPEERRAGLARMKQTLVTARLGLDDLR
                     AGVATTRRRVEAEQREL"
     gene            304..1062
                     /locus_tag="VFN38_02335"
     CDS             304..1062
                     /locus_tag="VFN38_02335"
                     /inference="COORDINATES: protein motif:HMM:NF019342.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HET9010617.1"
                     /translation="MTSLPSVAVTATTEIIRDVLRTRTNVSYSAAARAVGLRPYILPV
                     LGPHDADAMLAGMHGLILTGGEDVDPAHYGSTPHPALGDVHPERDAFELALVRAARAR
                     GVPTLAICRGVQIANVALGGTLVQDLPSEWPTALAHDGRWGRSDRVHDLRVAAGSRLA
                     EAIGATDATTNSLHHQAIARVAEGLVAVAHAPDGVVEAVEWAGEEWWMAGVQWHPEEL
                     TATPEGWDRALFAAFAAAVRARLVSSRDASAPRS"
     gene            complement(1028..1759)
                     /locus_tag="VFN38_02340"
     CDS             complement(1028..1759)
                     /locus_tag="VFN38_02340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010618.1"
                     /translation="MILADTRHHLTRDDAQLVARLIARDSGAQLSEVEQELADHGIDA
                     VLDDPRLPGALLRSRQGACASLPLFAYVMVRHALTRLGEDDRLLADYLASLMLHFGLR
                     DRAWRIAQSDDQMYTTLAELFADVDDPDGRRSFQVRTHLGNYALWVSGFFPDYIEHRR
                     WRRGGPDLDYFEEMGRRGFRLAADHRLAENHGMATLYATAAERFGLLRAALNDVSDAL
                     LFPDRSSPDRLMRQVTNEARWRRVS"
     gene            2073..>2335
                     /locus_tag="VFN38_02345"
     CDS             2073..>2335
                     /locus_tag="VFN38_02345"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HET9010619.1"
                     /translation="MLYFCIPAYNEAPTVGLLLWRLRKVFQEQPREYEVLVYDDGSTD
                     ATAETLAPYHKVMPLTVLGGPRVGYAAAVDALCREASRRTRYPR"
BASE COUNT          324 a          846 c          860 g          305 t
ORIGIN      
        1 cagctcgcgc tgctccgcct cgacccgccg gcgggtcgtc gccacgccgg cgcgcaggtc
       61 gtccagcccc agccgggccg tcacgagcgt ctgcttcatg cgcgccaggc cggcgcggcg
      121 ctcctcggga ggggtggcgc ggtccatgag gtcgcggagg gtctggcgga aggagtcgaa
      181 catgcgaagc ccggtgcgcg caggacgctg ggagacacgg tgcgacgcgg cgctggagcg
      241 gccgaacgcg agcgcttagg atacaggagc agcgcacacc ctcgcaacct cccgatccgc
      301 ctcgtgacgt cgcttccgtc ggtcgccgtg accgcgacca ccgagatcat ccgcgacgtg
      361 ctccgcacgc gtacgaacgt ctcgtacagc gcggcggcgc gcgcggtcgg cctgcgtccg
      421 tacatcctgc ccgtgctcgg gccccacgat gccgacgcga tgctcgccgg catgcatggg
      481 ctcatcctca ccggtgggga ggacgtggat ccggcgcact acggcagcac gccgcatccg
      541 gcgctgggcg acgtgcatcc cgagcgcgac gccttcgagc tcgccctcgt gcgcgcggcg
      601 cgcgcccggg gggtccccac cctggcgatc tgccgcggcg tccagatcgc gaacgtcgcg
      661 ctgggcggga ccctcgtgca ggacctgccg agcgagtggc cgacggctct cgcccacgac
      721 ggccgctggg gacggagcga ccgcgtgcac gacctgcgcg tggccgccgg ctcgcggctc
      781 gccgaggcga tcggcgccac cgacgcgacg acgaactccc tgcatcacca ggccatcgcg
      841 cgggtcgccg aagggctcgt ggcggtggcg cacgcgcccg acggcgtcgt ggaggcggtg
      901 gagtgggcgg gcgaggagtg gtggatggcc ggggtgcagt ggcacccgga ggagctcacg
      961 gcgacgcccg agggatggga tcgcgcactg ttcgccgcct tcgcggccgc cgtgcgcgcg
     1021 cggctggtca gctcacgcga cgccagcgcg cctcgttcgt gacctgacgc atcagccggt
     1081 cgggcgagga gcggtcgggg aagagcagcg cgtcgctgac gtcgttgagg gcggcacgca
     1141 gcagcccgaa gcgctccgcg gcggtggcgt acagcgtggc catgccgtgg ttctccgcca
     1201 ggcgatgatc cgcggcaagc cggaagccgc gccgccccat ctcctcgaag tagtcgaggt
     1261 ccgggccccc gcgccgccag cggcggtgct cgatgtagtc ggggaagaag ccgctcaccc
     1321 acagcgcgta gttgccgaga tgcgtccgca cctggaagct gcgccgcccg tcggggtcgt
     1381 ccacgtcggc gaacagctcg gccagcgtcg tgtacatctg gtcgtccgac tgagcgatcc
     1441 gccacgcgcg gtcgcgcagc ccgaagtgca gcatcagcga ggcgagatag tcggcgagca
     1501 gccggtcgtc ctcgccgagt cgcgtgagcg cgtgccgcac catcacgtac gcgaacaggg
     1561 ggagcgacgc gcaggcgccc tggcgcgagc gcagcagcgc ccccggcagg cggggatcgt
     1621 cgagcacggc gtcgatgccg tggtcggcga gctcctgctc cacctcggag agctgcgcgc
     1681 ccgagtcgcg cgcgatgagc cgcgcgacca gctgggcgtc gtcgcgcgtg agatgatgcc
     1741 gggtatccgc gagaatcatg tgctcgtctc ctcctcgtca cctgatacac cgtgccctcg
     1801 tgaaggattg ggcaaacggt gcgcctcaag tgtgacgacc cgcaccggcg gcggtttccg
     1861 cgctggcact cgccgcgcga gggtgctgac ggcgcgcctg cggcgcacgc ccgcgcgaag
     1921 agccccggcg gcacgggacg gaccgcgaaa tcgccccgtc ggcgaaccgc ccgggcgcgg
     1981 cggggtagca tccggatcgc agaacagggt ggcgagcgtc ccgtcgcctc ccgtaccttt
     2041 ctgcggcccc caccagcgtc tccgaggaac ccgtgctgta tttctgcatc cccgcctata
     2101 acgaggcccc tacggtcggc ctgctgctct ggcgcctgcg caaggtgttc caggagcagc
     2161 cgcgcgaata cgaggtgctc gtgtacgacg acggaagcac cgatgccacg gcggagaccc
     2221 tcgccccgta ccacaaggtg atgccgctca ccgtgctggg aggcccccgg gtgggctacg
     2281 ccgccgcggt ggacgccctc tgccgggagg cctcgcgccg cacccgctac ccgcg
//
LOCUS       DASSYW010000147         5194 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1562110, whole genome shotgun sequence.
ACCESSION   DASSYW010000147 DASSYW010000000
VERSION     DASSYW010000147.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 5194)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5194)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5194
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1562110"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1097
                     /locus_tag="VFN38_02350"
     CDS             <1..1097
                     /locus_tag="VFN38_02350"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HET9010620.1"
                     /translation="DQSVSPNAALVDQERAFPDDSIAALGRAGLLGLAVPAASGGMGE
                     GLRTAAAVLDEVAQRCSSTAMVYLMHICGVACYAAAPDKTASLLRAAAAGTHLSTLAF
                     SERGSRSHFWAPVSRAEASNGGARLNAQKSFVTSAGHADGYVVSTLAANGTTPVASTI
                     YLVLRSDRGVTTAGTWDGLGMRGNASAPMTFADVTVAADRALSPPGQGLEMMLAVVLP
                     AFQIGTAAVALGIAEAAVQATAKHLTSSRLEHLNSALADLPTLRARLGQMRIATDCAR
                     AHLTCVLDSIEAPGPATQLLVLEAKAAATEAAVEVTELALRTCGGAAFAGAHGIERMY
                     RDARAPIVMAPTTDQVHDFIGRALCGMEVF"
     gene            1118..1921
                     /locus_tag="VFN38_02355"
     CDS             1118..1921
                     /locus_tag="VFN38_02355"
                     /inference="COORDINATES: protein motif:HMM:NF024376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhnD/SsuA/transferrin family substrate-binding
                     protein"
                     /protein_id="HET9010621.1"
                     /translation="MRVGAVMYDPKVSVIWEIIRNFFEDQGVPIHVSFYSTYELQNDA
                     LMAGAIDIAWNSPLAWLDVQRRSGGTCRAIAMRDTDRDRCSHIVARRGGPIRTVDNLR
                     GHTLAVGAVDSPQATLIPLGRLRQAGLEPRRDLTIARHDVLVGKHGDHVGGELDAFGC
                     LARGNAQACTMLDLNWTAWTNDGTVDPFAFHVVASTDRFDHCVFTARQSFDAGAERAW
                     LDALFAMRYDDPSHREMMDLEGLQAWLPGRTSGFGALAAAVAAERFFTP"
     gene            1918..3171
                     /locus_tag="VFN38_02360"
     CDS             1918..3171
                     /locus_tag="VFN38_02360"
                     /inference="COORDINATES: protein motif:HMM:NF013847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-independent methionine synthase II
                     family protein"
                     /protein_id="HET9010622.1"
                     /translation="MIGLPLFPVTTVGSFPRPPALLDAQRRLRRGRTGRAEFDRVADE
                     AIVDLVRRQEEAGCDLVTDGELRRDNFYSFIAQKFDGVRLMTLAEMLDVVEDKVSFER
                     LLRTLDVPAYAISNPTCTGQLFRRESLAVDDVRFLRRHTDRAIKVTLPGPYLLTRAMF
                     VAAVTRSVYETNEDLAEDVVSMLREEVLALAEEGADFVQLDEPVLSELAFAPANTRTF
                     MCAALAARRDPAEELEFAVSLINRVTADVTAARTGVHVCRGNWSRDEATLLRGGYRPL
                     APHLQRIQATQLVLEYATERAGEVLPCPGKELGLGVVNPRVDRVETPAEIRRSVERAL
                     ACFAPEQIFLNPDCGFGTFSSRPMNSTDIAMAKVRSMAAAAADLRAAVPLSSADGRPK
                     EPPDTGRHRHGERTPERHAHGPERG"
     gene            complement(3073..3804)
                     /locus_tag="VFN38_02365"
     CDS             complement(3073..3804)
                     /locus_tag="VFN38_02365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VIT family protein"
                     /protein_id="HET9010623.1"
                     /translation="MSYLYYHHPIEEQMRHRELHRSERIGWLRAAVLGANDGIVSTAS
                     LVVGVASAEGSREAVLVAGVAGLVAGALSMAAGEYVSVSSQADTERADLALEKRELAT
                     QPAAEEDELTTIYVRRGLDRDLARTVARQLMAHDALQTHARDELGLTAELAARPLQAA
                     VASAATFAIGAGLPVLTILAAPPGSIALIVSAVSLVSLVALGAIAARAGGASAALGAV
                     RVAFWGALAMAVTAGVGRLFGTTVG"
     gene            3803..>5194
                     /locus_tag="VFN38_02370"
     CDS             3803..>5194
                     /locus_tag="VFN38_02370"
                     /inference="COORDINATES: protein motif:HMM:TIGR01494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HET9010624.1"
                     /translation="MASEYQQPVEQVLAIHATDPIRGLSAGDARARLEEYGANQLAAA
                     RPTPAWRKFLAQFTDVLVVLLLIATAISAGLWLYERDSPLPYEAIAISAVVLLNAIMG
                     YLQEQRAESAIAALQQMAAAHAHVVRDGAPTSVPAADVVPGDIILIEEGDTVPADARV
                     IESTALHLAEAALTGESLPVSKGVAPISAEVGLGDRDNMIYSGTSATYGRGRAVVVAT
                     GMRSEMGRIAGMLANVPAEPTPLQRELDYVGKLLGIVVVVIAIVMIVTIVVVEHVRGL
                     SALFDVLILGVALAVAAVPEGLPAVVTAVLSIGVQRMARRNALVRHLSAVETLGSASV
                     IASDKTGTLTRNEMTVREVVTASGRVMLTGTGYAPAGGVTGDDGAPVAGDLQLELERA
                     LAVADRANNASLQQRDGRWAMHGDPTEGALIVAARKAGLAAEHLTRRFARVGEVPFSS
                     ERKLMSTLHTDADE"
BASE COUNT          778 a         1784 c         1826 g          806 t
ORIGIN      
        1 cggaccagtc ggtctcgccc aacgcggcac tcgtcgatca agaacgcgcg tttcccgatg
       61 actcgattgc cgccctgggg agggccgggc tgctcggcct cgcggttccg gccgcgtctg
      121 gaggcatggg ggaaggactg cggacggctg ccgcggtgct cgacgaagtc gcgcagcggt
      181 gctcgtccac ggcgatggtg tatctgatgc acatctgcgg cgtcgcctgc tacgcggcgg
      241 cgccggacaa gaccgcgtcg ctgctgcgcg ccgccgcggc cggcacgcac ttgagcacgc
      301 tggccttcag cgagcgtggg tcgcgcagtc atttctgggc cccggtgagc cgcgccgagg
      361 cgtcgaatgg aggggcacgc ctcaacgcgc agaagtcgtt cgtgacgtct gccggccatg
      421 ccgacggcta cgtggtctcg acgctcgccg cgaacgggac gacgcccgtt gcgagcacga
      481 tctatctcgt gctccgcagc gaccgaggcg tgacgacggc cggcacgtgg gacgggctcg
      541 gcatgcgcgg caatgcgagt gcgccgatga cgtttgcgga cgtcaccgtc gcggcggatc
      601 gcgcgctcag tccacccggc caggggttgg agatgatgct cgccgtcgtg ctgccggcat
      661 tccagatcgg caccgcggcg gtggcgctcg gcatcgccga ggccgccgtg caggcgaccg
      721 cgaagcacct cacgtcgtcg cgcctcgagc acctgaacag cgcgctcgcc gacttaccga
      781 cgctgcgcgc ccgcctcggg cagatgcgaa tcgcgacgga ttgcgcccgc gcgcacctca
      841 cctgcgtgct cgactcgatc gaggcgccgg ggccggcgac acaactcctg gtgctcgagg
      901 ccaaggccgc cgcgacggag gcggcggtgg aagtcaccga actcgcgctg cggacctgcg
      961 gcggcgcggc gttcgccgga gcgcacggca tcgagcggat gtaccgcgac gctcgcgcgc
     1021 cgatcgtgat ggcgcccacc accgatcagg tgcacgactt catcggccgg gcgctgtgcg
     1081 ggatggaggt gttctgatgt cgcccttgga tacagtcgtg cgcgtcgggg ccgtcatgta
     1141 cgaccccaag gtgtcggtga tctgggaaat cattcggaac ttcttcgagg atcagggcgt
     1201 accgatccac gtgtcgttct acagcacgta cgagctgcag aacgacgcgt tgatggccgg
     1261 ggcgatcgac atcgcctgga actcgccgct cgcatggctc gatgtccagc ggcggtcggg
     1321 cggcacctgc cgcgcgatcg ccatgcgcga cacggaccgc gaccgctgct cgcatatcgt
     1381 ggcccggcgg ggcggtccca ttcgcaccgt cgacaatctg cgcggccaca cgctcgcggt
     1441 cggtgcggtc gattccccgc aggcgacgct tattccgctc ggccgcctca ggcaggcagg
     1501 cctcgagccg cggcgcgacc tgacgatcgc gcgccatgac gtcctcgtcg ggaaacacgg
     1561 cgaccacgtc ggcggcgagc tcgacgcgtt cggctgcctg gctcggggca atgcgcaggc
     1621 ctgtacgatg ctcgatctga actggaccgc ctggacgaac gacggcaccg tggatccatt
     1681 tgcgtttcac gtcgtcgcct cgacggatcg cttcgatcac tgcgtgttca ccgcacggca
     1741 gtcgttcgac gcgggtgcag agcgagcctg gctcgacgcg ctgttcgcga tgcgctacga
     1801 cgacccatcg caccgcgaga tgatggatct ggaaggcttg caggcctggc tgcccgggcg
     1861 gacgtccggc ttcggcgcgc tcgccgcggc cgtcgccgcg gagcgtttct tcaccccatg
     1921 attgggctgc cgctgtttcc ggtcaccacg gtcggcagct tcccgcgtcc cccggcgctg
     1981 ctggacgcac agcggcgtct tcgccgcggc cggacagggc gcgccgagtt cgaccgcgtc
     2041 gccgacgagg cgattgtgga tctcgtgcgg cgccaggaag aggccggctg cgacctcgtg
     2101 accgacggcg agctgcggcg cgacaacttc tactcgttca tcgcgcagaa gttcgacggc
     2161 gtgcgattga tgacgctcgc cgagatgctc gacgtcgtcg aggacaaggt ttcgttcgag
     2221 cgcctgctgc gcacgctgga cgtccccgca tatgcgatca gcaatcccac ctgcaccggc
     2281 caactgtttc gacgcgagtc gctggccgtc gacgatgtgc ggttcctgcg ccgccacacc
     2341 gatcgcgcga tcaaggtcac gctgcccggg ccgtacctgc tgacgcgcgc gatgttcgtc
     2401 gccgcagtga cgcgcagcgt ctatgagacc aacgaggatc tcgccgagga cgtggtatcg
     2461 atgctgcgcg aagaggttct cgcgctggcg gaagaaggag cggacttcgt gcagctcgac
     2521 gagccggtgc tcagcgagct cgcgttcgcg ccggccaaca cgcggacgtt catgtgcgcg
     2581 gccctcgcgg cgcgccggga tcctgccgag gagctcgaat tcgccgtctc cctgatcaac
     2641 cgcgtgacgg cagacgtgac cgcagcgcgg acgggggttc acgtgtgtcg agggaactgg
     2701 agccgcgacg aggccacgct cctgcgcggc ggctatcgcc cactggcccc gcatctgcag
     2761 cgaatccagg caacgcagct ggtcctcgag tacgcgaccg agcgcgccgg cgaggtattg
     2821 ccgtgtcccg gaaaggaact cggcctcggc gtcgtcaatc cgcgcgtgga ccgcgtggag
     2881 acgccggccg agatccgccg ctcggtcgag cgggcactcg cctgcttcgc gccggagcag
     2941 atcttcctca atcccgactg cggcttcggc acgttctcca gccgcccgat gaacagcacg
     3001 gatatcgcga tggcgaaagt gcgctcgatg gcggcagccg cagccgatct tcgcgcggct
     3061 gttccccttt cgtcagccga cggtcgtccc aaagagcctc ccgacaccgg ccgtcaccgc
     3121 catggcgagc gcaccccaga acgccacgcg cacggccccg agcgcggctg acgcgccgcc
     3181 ggcgcgcgcc gcgatagccc cgagcgcgac cagggagacg agcgacacgg ccgacacgat
     3241 gagcgcaatg ctgcccggcg gcgcggccag gatcgtcaac acgggcaacc cggcaccaat
     3301 cgcgaaggtt gccgcggacg ccaccgccgc ctgcaacgga cgcgcggcga gctccgccgt
     3361 cagacccaac tcgtcgcggg catgcgtctg cagcgcatcg tgggccatca actgtcgggc
     3421 gacggttcgt gcaaggtcgc ggtcgaggcc acggcgcacg tagatcgtgg tgagttcgtc
     3481 ttcttccgcc gcgggctgtg tcgccagttc acgcttctcc agcgcgaggt cggcccgctc
     3541 ggtgtccgcc tgcgagctga ccgacacgta ttcgccggca gccatcgaaa gcgcgccggc
     3601 gaccagcccg gccacgcccg cgacgagaac cgcctcccgg ctcccctcgg ccgaggctac
     3661 gccgacgaca aggcttgccg tcgagacgat gccgtcgttc gcgccgagaa ccgcggcgcg
     3721 gagccagccg atccgttcgc tgcgatgcag ctcgcgatgt ctcatttgtt cctcgatggg
     3781 gtgatgatag tagaggtacg acatggcgtc cgagtatcag cagcccgtcg agcaggtcct
     3841 ggccatccac gccaccgatc cgatccgggg actgagcgcc ggcgacgctc gtgcgcggct
     3901 cgaagagtac ggagcgaatc agttggccgc cgcacgcccg actcccgcct ggcgaaaatt
     3961 cctggcgcag ttcacggacg tgctggtcgt actgctgttg attgccaccg cgatttctgc
     4021 gggactctgg ctgtacgagc gcgactctcc gctgccctac gaggcgattg cgatcagcgc
     4081 cgtcgtcctg ctgaacgcga tcatgggcta cctgcaggag cagcgtgccg aatccgcgat
     4141 cgccgcgctg cagcagatgg ccgccgccca cgcccacgtg gttcgggacg gggcgcccac
     4201 gagcgtccct gccgcggacg tggttcccgg cgacatcatc ctcatcgagg aaggggacac
     4261 ggtgcccgcg gacgcccggg tcatcgagtc gacggcgctg cacctggcgg aagcggcgct
     4321 gacgggcgag agccttccgg tctccaaggg ggtcgcgccg atcagcgcgg aggtgggcct
     4381 cggcgatcgc gacaacatga tctacagcgg cacgtccgcg acctacggcc gcggccgcgc
     4441 cgtggtggtc gcgaccggga tgcgcagcga aatgggccgc atcgccggca tgctcgccaa
     4501 cgtgccggcg gagccgacgc cgctgcagcg ggagctcgat tacgtcggca agctgctcgg
     4561 gatcgtggtc gtcgtcatcg ccatcgtgat gatcgtgacg atcgtcgtcg tcgagcacgt
     4621 gcgcggcctg tcggcgcttt tcgacgtgct gattctcggc gtggcgctgg ccgtcgcggc
     4681 ggtgccggaa gggctgcccg ccgtcgtgac cgccgtgttg tccatcggcg tgcagcggat
     4741 ggcgcggcgg aacgccctcg tccgccatct cagcgcggtc gaaacgctcg ggtcggcatc
     4801 ggtgatcgcc tcggacaaga ccgggacgct cacgcgcaac gagatgacgg tgcgcgaagt
     4861 ggttacggcg agcggccggg tgatgctcac cggcacgggg tatgcccctg ccggtggcgt
     4921 gacgggggac gacggggcgc cggttgcggg ggacctgcag ctcgaattgg agcgcgccct
     4981 ggcggtcgcc gatcgcgcga acaacgcatc gctgcagcag cgcgacgggc gctgggcgat
     5041 gcacggcgat cccaccgaag gggcgttgat cgttgcggcc cggaaggcgg gtctcgcggc
     5101 cgagcatctg acgcggcgtt tcgcccgtgt cggcgaggtg ccgttttcgt ccgaacggaa
     5161 gttgatgagc acgctccata cggacgcgga cgag
//
LOCUS       DASSYW010000148         2566 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_88228, whole genome shotgun sequence.
ACCESSION   DASSYW010000148 DASSYW010000000
VERSION     DASSYW010000148.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2566)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2566)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2566
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_88228"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1423)
                     /gene="glgP"
                     /locus_tag="VFN38_02375"
     CDS             complement(<1..1423)
                     /gene="glgP"
                     /locus_tag="VFN38_02375"
                     /inference="COORDINATES: protein motif:HMM:TIGR02094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-glucan family phosphorylase"
                     /protein_id="HET9010625.1"
                     /translation="MTFVPTRSSVAYFSMEICLEQAIPTYSGGLGVLAGDTLRSAADL
                     AVPVVAVTLLHRKGYFEQHLDASGQQTETPVHWLPERVLERVDAHAFVTLEGREVKVT
                     AWKYVVKGVRGHEVPVYLLDTNLPENSDWDRTLTDTLYGGDEHYRLCQEIVLGMGGAA
                     LLQEIGYQNGTIYHLNEGHSALLTLQLLEKQLNGRPAFELEEADFEAVRVRCIFTTHT
                     PVPAGHDKFPLDMVRKVLGDARVALLESCGGIHEGMLNMTHLALHLTRWVNGVAMRHG
                     EVSRGMFPDYPIDSITNGVHATTWTGPAFAELFDRRIPEWRHDNLYMRYAVSIPLQEI
                     RDAHAASKAVLLEEIERRSGEKLDPGVMTIGFARRATPYKRADLIFSDLDRLTKIARN
                     IGKVQIVFGGKAHPHDGGGKELIRRIYAAREKLGDLVKIVYLENYEMALAHKMVAGVD
                     LWLNNPMKPLEASGTSGMKAAMNG"
     gene            complement(1544..>2566)
                     /locus_tag="VFN38_02380"
     CDS             complement(1544..>2566)
                     /locus_tag="VFN38_02380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010626.1"
                     /translation="DTKRSADVRARLDALSEHPAAWERRLRRWRRHHRPLQTLVAGRL
                     APSRATDNFIYQALVGLWPIGSGVRATDDDRWLAELKTRLTAYIQKAVREAKVSTSWT
                     DPDAEYEQAIETFIAAMLARPANARFLHDVEQFVGLLAPQGQWNTLARLVVHLTAPGV
                     PDIYQGDELSFRALVDPDNRRPVDFAARERALEAIAGETEVQVPPFARDDIGALAEND
                     RLKLYVTTRLLHLRASRGALFSAGGYVPLAAEGARAAHVVAFQRTHHDEAALVVVPRL
                     SFGLGTDVPIREVWGDTIVRLPAAGAVRAWRCELGGQVVHPRDGGLLLADLSARFPVA
                     VLTPHR"
BASE COUNT          372 a          902 c          880 g          412 t
ORIGIN      
        1 cgccgttcat cgccgccttc atgccgctgg tgccggacgc ctcgaggggc ttcatcgggt
       61 tgttcagcca gagatccacg ccggccacca tcttgtgcgc cagcgccatc tcgtagttct
      121 cgaggtagac gatcttcacg aggtcgccga gcttctcccg cgcggcgtag atgcggcgga
      181 tcagctcctt gcccccgccg tcgtgcgggt gcgccttgcc gccgaacacg atctgcacct
      241 tgccgatgtt gcgggcgatc ttcgtgaggc ggtcgaggtc ggagaagatc aggtcggcgc
      301 gcttgtacgg cgtggcgcgg cgcgcgaagc cgatcgtcat cacgcccggg tccagcttct
      361 cgccgctgcg ccgctcgatc tcctccagca gcacagcctt gctcgccgcg tgcgcgtcgc
      421 gaatctcctg gagcgggatg ctcaccgcgt agcgcatgta caggttgtcg tgccgccact
      481 ccgggatgcg ccggtcgaac agctcggcga acgccggccc cgtccacgtc gtggcgtgca
      541 cgccgttggt gatggagtcg atcgggtagt cggggaacat gccgcgcgag acctcgccgt
      601 ggcgcatcgc cacgccgttg acccagcgcg tcaggtgcag cgcgaggtgc gtcatgttga
      661 gcatcccctc gtggatgccg ccgcagctct ccaggagcgc gacgcgcgcg tcgccgagca
      721 ccttgcgcac catgtcgagc gggaacttgt cgtgccccgc cggcaccggc gtgtgcgtcg
      781 tgaagatgca gcgcacgcgc accgcctcga aatccgcctc ctccagctcg aacgccggcc
      841 gcccgttgag ctgcttctcc aggagctgga gggtgagcag cgccgagtgg ccctcgttca
      901 ggtggtagat cgtgccgttc tggtagccga tctcctggag cagcgccgcg ccgcccatgc
      961 ccagcacgat ctcctggcag aggcgatagt gctcgtcgcc gccgtagagc gtgtcggtga
     1021 gggtgcggtc ccagtcgctg ttctcgggaa ggttcgtgtc gagcaggtag accggcacct
     1081 cgtgcccccg cacccccttc accacgtact tccacgccgt gaccttcacc tcgcgcccct
     1141 cgagcgtcac gaaagcgtgc gcgtccacgc gctcgagcac gcgttcgggc aaccagtgca
     1201 ccggcgtctc cgtctgctgc ccggaggcat cgaggtgctg ctcgaagtag cccttccggt
     1261 gcagcagcgt gaccgcgacg accggcaccg cgaggtcggc ggcggagcgc agggtgtcgc
     1321 cggcgagcac gccgagtccg ccactgtagg tggggatcgc ctgctcgagg cagatttcca
     1381 tcgagaagta ggcgacgctg gaccgcgtcg ggacgaacgt catgaacgag cctcgggcac
     1441 agggcacaaa caggaaagca gcgcccgacc gacggttgtt cccgccgggg gcgccggtct
     1501 gcggtctgat cagcagagta ttctatgcca gagccgcccc gattcaacga tgaggggtca
     1561 gcacggcgac cgggaaccgg gcgctgaggt cggccaggag cagcccgcca tcccgtgggt
     1621 gaacgacctg cccacccaat tcgcaacgcc acgcccggac cgctccggcc gcgggaagac
     1681 gcacgatcgt gtctccccac acctctcgta tcggcacgtc ggtccccaaa ccgaagctga
     1741 gccgcgggac gacgacgagc gccgcctcgt cgtgatgagt ccgctgaaag gccacgacgt
     1801 gcgccgcacg agcgccctcc gccgcgagcg ggacgtatcc gcccgccgag aagagcgccc
     1861 cccggctcgc gcgcaggtgc agcagccgcg tggtcacgta gagcttcagc ctgtcgttct
     1921 ccgccagcgc tccgatgtcg tctcgagcga agggagggac ctgcacttct gtttcgcccg
     1981 cgatcgcttc cagcgcgcgc tcgcgcgccg cgaagtccac cggccggcgg ttgtccggat
     2041 cgacgagcgc gcggaaggac agctcgtcgc cctggtagat gtcgggcacc cccggtgcgg
     2101 tgaggtgcac gaccagccgc gcgagcgtgt tccactgtcc ctgcggtgcg aggaggccga
     2161 cgaactgctc cacgtcgtgc aggaagcgcg cgttcgcggg gcgcgcgagc atcgcggcga
     2221 tgaaggtctc gatcgcctgc tcgtactcgg cgtcgggatc ggtccagctc gtgctcacct
     2281 tcgcttcgcg caccgccttc tggatgtagg cggtgagccg ggtcttgagc tcggccagcc
     2341 agcggtcgtc gtcggtggcg cgtacccccg acccgatggg ccagagcccg acgagcgcct
     2401 ggtagatgaa gttgtccgtc gcccgcgacg gtgcgagccg ccccgccacg agcgtctgga
     2461 gcggacggtg atgtcgccgc caccgacgga ggcgccgctc ccacgccgcg gggtgctcgc
     2521 tcagtgcgtc gagtcgggcg cggacgtcgg cgctgcgctt ggtgtc
//
LOCUS       DASSYW010000149         2005 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_954556, whole genome shotgun sequence.
ACCESSION   DASSYW010000149 DASSYW010000000
VERSION     DASSYW010000149.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2005)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2005)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2005
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_954556"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..416)
                     /locus_tag="VFN38_02385"
     CDS             complement(<1..416)
                     /locus_tag="VFN38_02385"
                     /inference="COORDINATES: protein motif:HMM:NF012900.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010627.1"
                     /translation="MAVEVKICGLTRAVDAEAADAAGAAYLGVIFAGGPRQRSPAEAR
                     ATLAGRRARKVGVFAAHSESGIAEVASIVGLDVVQLHDESDPERVLAVRAATGLEVWA
                     VVRTADGNLPENAEELADAADALLIDALVAGRLGGSG"
     gene            complement(406..1227)
                     /locus_tag="VFN38_02390"
     CDS             complement(406..1227)
                     /locus_tag="VFN38_02390"
                     /EC_number="4.1.1.48"
                     /inference="COORDINATES: protein motif:HMM:NF012444.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004425 - indole-3-glycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
                     /protein_id="HET9010628.1"
                     /translation="MQASSRWIAPRGTLGAIVVEAEARAARLEGTRDTLEGDAEETLP
                     GPSLERALRGDAVALLAEVKRRSPSRGAIDDSLDAVAQARAYARGGASAVSVLTEPRH
                     FGGSADDLRQVRAALSIPALKKDFHVAPIQLLEARALGASAALLIARAVSPAQLEALM
                     AYGRGLGLELLVEVRSEDELHRALGAGATMIGVNNRDLETLEIDEGTAERIVPLIPSS
                     VVAVAESGVRSRADVERYAASGADAVLVGSVLSAAADPAEGARALAGVARRPRGG"
     gene            1331..1939
                     /gene="lexA"
                     /locus_tag="VFN38_02395"
     CDS             1331..1939
                     /gene="lexA"
                     /locus_tag="VFN38_02395"
                     /EC_number="3.4.21.88"
                     /inference="COORDINATES: protein motif:HMM:TIGR00498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor LexA"
                     /protein_id="HET9010629.1"
                     /translation="MPLTKRQREILNYLSLYSEQNGYAPSFEEIAENFNYNSLATVHE
                     HLSNLERKGFIKRSYNESRAIEILPSDLLPKAIELPLLGAVAAGVPIEAVAHGETIAV
                     PDSFVQRGGNHYVLRVRGNSMIEEQIRDGDLVVVNERQRADNGEMVIAMLHGNSATVK
                     KFYRERDGRIRLQPANETMAPMYVHENDITIQGIVVGVMRRY"
BASE COUNT          304 a          742 c          684 g          275 t
ORIGIN      
        1 ccgctgccgc cgaggcggcc ggcgacgagc gcgtcgatga gcagcgcgtc ggcggcatcg
       61 gcgagctcct cggcgttctc cggcaggttg ccgtccgcgg ttcgcaccac cgcccacacc
      121 tcgagccccg tggccgcccg caccgccagc acccgctccg gatccgactc gtcgtggagc
      181 tgcacgacgt ccaggcccac gatggacgcc acctcggcga tcccggactc ggagtgcgcc
      241 gcgaacacgc cgaccttgcg ggcgcggcga ccggcgaggg tggcccgcgc ctccgcgggg
      301 gagcgctgtc gcggcccgcc ggcgaagatc actccgaggt atgcggcgcc ggccgcgtcg
      361 gccgcctcgg catccacggc gcgcgtgaga ccgcagatct tcacctcaac cgccacgagg
      421 cctccgcgcc actccggcga gcgccctggc cccctcggcc gggtccgcgg cggccgagag
      481 caccgagccc acgagcaccg cgtcggctcc gctcgccgcg tagcgctcca cgtcggcacg
      541 ggatcgcacg ccgctctcgg ccaccgccac caccgacgac gggatgagcg ggacgatccg
      601 ctccgccgtg ccctcgtcga tctcgagcgt ctcgagatcg cggttgttca ctccgatcat
      661 cgtggcgccg gccccgagcg cgcgatgcag ctcgtcctcg ctccggacct ccaccagcag
      721 ctcgagcccg aggcctcgcc cgtaggccat cagcgcttcc agctgcgcgg gggacaccgc
      781 gcgggcgatg aggagcgcgg ccgacgcgcc cagcgcccgg gcttccagca gctggatggg
      841 cgcgacgtgg aagtccttct tgagcgccgg gatgctcagc gccgcgcgca cctggcgcag
      901 gtcgtccgcg gagcctccga agtgccgggg ctccgtgagg acgctgaccg ccgaggcgcc
      961 cccccgggcg taggcccgcg cctgcgcgac cgcgtcgagc gagtcgtcga tcgcgcccct
     1021 ggacggcgac cggcgcttca cttcggcgag cagggcgacc gcgtccccgc ggagcgcccg
     1081 ctccagggag gggcccggaa gggtctcctc cgcgtcccct tccagcgtgt cgcgcgtgcc
     1141 ttcgaggcgg gcggctcgcg cctccgcctc gacgacgatg gccccgagcg taccccgggg
     1201 ggcgatccag cgagaagatg cttgcacttc gggacttatt cggatatcct attcgggggt
     1261 tgttcggtcg gccatggtgc cacccgtccc gaatgcggtc gcgatcgcca ctctttctgc
     1321 cggagccgtc atgccgctca ccaagcgtca acgcgagatc ctaaactacc tctcgctcta
     1381 ctccgagcaa aacggctatg cgccgagctt cgaggagatc gcggagaact tcaactacaa
     1441 ctcgctggcg acggtgcacg aacacctgag caatctcgag cggaagggct tcatcaagcg
     1501 gtcgtacaac gagagccgcg ccatcgagat cctgccgagc gacctcctgc ccaaggcgat
     1561 cgagctgccc ctgctgggcg ccgtggcggc gggcgttccc atcgaggcgg tggcgcatgg
     1621 cgagacgatc gccgtgcccg actcgttcgt gcagcgcggc ggcaaccact acgtgctgcg
     1681 ggtgcgcggc aactcgatga tcgaggagca gatccgcgac ggcgatctcg tggtcgtgaa
     1741 cgagcgccag cgcgccgaca acggcgagat ggtgatcgcg atgctccacg gcaactccgc
     1801 caccgtcaag aagttctacc gcgagcgcga cgggcgcatc cgcctccagc cggccaacga
     1861 gacgatggcg ccgatgtacg tgcacgagaa cgacatcacg atccagggga tcgtggtggg
     1921 ggtgatgcgt cggtactagg gggcgagaac ggcaactgca ggaactcggt acctggtacc
     1981 tcgtaccggg taccgagtac cagct
//
LOCUS       DASSYW010000150         2074 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1248883, whole genome shotgun sequence.
ACCESSION   DASSYW010000150 DASSYW010000000
VERSION     DASSYW010000150.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2074)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2074)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2074
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1248883"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(144..1667)
                     /gene="menE"
                     /locus_tag="VFN38_02400"
     CDS             complement(144..1667)
                     /gene="menE"
                     /locus_tag="VFN38_02400"
                     /EC_number="6.2.1.26"
                     /inference="COORDINATES: protein motif:HMM:TIGR01923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008756 - o-succinylbenzoate-CoA ligase
                     activity [Evidence IEA];
                     GO_process: GO:0009234 - menaquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="o-succinylbenzoate--CoA ligase"
                     /protein_id="HET9010630.1"
                     /translation="MSSPTAAFPDWLASRAASSPDRDALVTDGRTWSFRELDEQVTRT
                     AHHLVALGARPGDRVATLLHNGLAAVLLPHALLRLGATLVPLNVRLGDSELAWQLADA
                     APRLLVTEERTVARAERAAESLSGRVTVCTDRALVGPATPPPARDGDRARLRLRHAAD
                     AVLAMIYTSGTTGRPKGALLTVGNFWWSAIGSALNLGTHADDRWLVCLPLFHVGGLSI
                     LTRAAIYGITAVVHDGFDPDAVSAAVDDERITVVSVVATMLQRMLDARGGRPWPASLR
                     CVLLGGGPAPRPLLERCASLGVPVVQTYGLTETCSQVATLAPGDALLRSGSAGKVLYP
                     NELRVAAPPGTGASDDAGEILVRGPVVMAGYAGRPEDTARAIVDGWLHTGDIGRLDAD
                     GYLYVLDRRDDLIVTGGENVYPAEVEAVLLSHPSIAEVGVVGIGDETWGQRVVAVARL
                     GDATAILDGASLEALCRSRLAGYKVPREFRLVVEPLPRTASGKLRRGALRDLLAGRS"
     gene            complement(1694..>2074)
                     /locus_tag="VFN38_02405"
     CDS             complement(1694..>2074)
                     /locus_tag="VFN38_02405"
                     /inference="COORDINATES: protein motif:HMM:NF013226.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiA family prenyltransferase"
                     /protein_id="HET9010631.1"
                     /translation="ALLLSVPVGLLVTNILVVNNLRDLPTDRAAGKRTLAVRLGDRAT
                     RAQYVLFTVMAYLVPSALALADESRRWLLLPLLTAPLGARLAGRVHGGLAGRDLNAVL
                     KQTGILLLLFGVLLTAALLLGRLR"
BASE COUNT          316 a          749 c          773 g          236 t
ORIGIN      
        1 cggggtcctg cgaactccac ctgtgctgcc tctccgttcg gcccagttct ctcgcggtcg
       61 cgcccagcgc gacggaagtc gaataatcta gtcgaaccac tcccgaaggg cgggctcaga
      121 ccagaccggc gccaccccca ggctcaggac cggccggcga gcaggtcgcg cagggcgccg
      181 cggcggagct ttcccgaggc agtacggggc agcggctcga cgacgagccg gaactcccgc
      241 ggcaccttgt agccggcgag ccgcgaccgg cacagcgcct cgagcgacgc gccatccagg
      301 atggcggtgg cgtcgcccag cctcgccacc gcgacgacgc gctgccccca cgtctcgtcg
      361 ccgatgccca ccacccccac ctcggcgatg gacggatgcg acagcagcac cgcctccacc
      421 tccgccggat agacgttctc gccgccggtg acgatcaggt cgtcccgccg gtcgagcacg
      481 tacaggtagc cgtcggcgtc gagccggccg atgtcgccag tgtgaagcca cccgtccacg
      541 atcgcgcgcg cggtgtcttc gggccggccc gcgtagcccg ccatcaccac gggaccgcgc
      601 acgagaatct cccccgcgtc gtccgacgcg ccggtccccg gtggcgcggc gacgcgcagc
      661 tcgttcgggt acagcacctt tccggcggag ccggagcgga gcagcgcgtc gccgggcgcg
      721 agggtcgcga cctgcgagca ggtctcggtg aggccgtagg tctgcaccac cggcacgccg
      781 agcgacgcgc accgctcgag cagcggccgc ggcgccggcc cgcctccgag cagcacgcag
      841 cgaaggctcg ccggccatgg gcggccgccg cgcgcatcga gcatccgctg cagcatggtg
      901 gcgaccaccg acacgacggt gatgcgctcg tcgtcgacgg ccgcgctcac cgcatcggga
      961 tcgaagccgt cgtgcaccac cgccgtgatg ccgtagatgg ccgcgcgcgt gaggatggac
     1021 agtccgccga cgtggaacag ggggaggcag acgagccacc gatcgtcggc gtgggtgccg
     1081 aggttgagcg ccgagccgat ggcgctccac cagaagtttc ccacggtgag cagcgcgccc
     1141 ttcggccgtc cggtggtgcc ggacgtgtag atcatcgcga gcaccgcatc ggcggcgtga
     1201 cgcagacgga gacgcgcgcg gtcgccatct cgcgccggcg ggggcgtcgc aggtccgacg
     1261 agcgcgcgat ccgtgcacac ggtgacgcgc ccggacaggg attccgcggc ccgctcggcc
     1321 cgcgcgacgg tgcgctcctc cgttacgagc aggcgcggcg cggcgtcggc gagctgccag
     1381 gcgagctcgg agtccccgag tcgtacgttg agcggaacga gggtggcgcc gagccgcagc
     1441 agcgcatgcg ggagcagcac cgccgccaac ccgttatgga ggagcgtggc gacgcggtcg
     1501 cccgggcgcg cgccgagcgc gacgaggtgg tgcgcggtgc gcgtcacctg ttcgtcgagc
     1561 tcgcggaagc tccacgtccg gccgtccgtc acgagcgcgt cgcgatcggg cgagctcgcg
     1621 gcgcgagagg ccagccagtc ggggaaggcc gcagtcgggg aagacatggg tagagcgtgc
     1681 gctcgccggc gggttagcgc aaccggccga gcagcagcgc cgcggtgagg agcacgccga
     1741 agagcaacag aaggatcccc gtctgcttga gcaccgcgtt gaggtcacgg ccggcgaggc
     1801 caccatgcac gcggcccgcg agccgcgcgc ccagcggcgc ggtgagcaac ggcaggagga
     1861 gccagcgccg cgattcgtcc gccagcgcga gcgccgaggg gacgaggtac gccatcaccg
     1921 tgaacagcac gtactgcgcg cgggtggcgc ggtcgccgag gcgcacggcg agggtgcgct
     1981 tgccggccgc gcgatcggtg ggcaggtcgc gcaggttgtt caccaccagg atgttcgtga
     2041 cgagcagccc caccggcacc gagagcagca gggc
//
LOCUS       DASSYW010000151         3049 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_88209, whole genome shotgun sequence.
ACCESSION   DASSYW010000151 DASSYW010000000
VERSION     DASSYW010000151.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3049)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3049)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3049
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_88209"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1543)
                     /locus_tag="VFN38_02410"
     CDS             complement(<1..1543)
                     /locus_tag="VFN38_02410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004180 - carboxypeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HET9010632.1"
                     /translation="MARPAVRCLATLVACALVLAAPSTAAAQRGAGNYADSIKYKYAG
                     TPQLDALKAEAVREIDAKAKMIQVMVDQVFSYGELGFQEIETSRYLTGILEENGFKVE
                     RGVAGIPTAFVAKWGSGKPVISLGSDIDDIPQASNKPGVGYHDPMIAGAPGHGEGHNS
                     GMPLNIAAAIVVKKIMERDHIPGTLVLWPGVAEEQMAGKAFLVRAGVFKDVDVTLFTH
                     VGNALAVSWGQSGNNALISAIFKFKGSSAHAAGAPWRGKSALDAVMLMANAWEFHREH
                     MELPQRSHYVIPDGGDQPNVVPSTASIWFYFRERDYERTLAMFEDAKKMAQGATMMTG
                     TQIDTVMMVGSGWSGHFSRPIAEAMYRNIEKVGTPTWDEKDQTLAKALQRELAVPDSG
                     LSTRPGRLGGPVNEATRMGGGSDDIGDVSWNVPTITLNYPSNIPGTPGHNWANAISMA
                     TPIAHKGVVAGAKVQAMTMLDILLTPQVVADAWDYFNNVQTKTTKYRSFFAPTDQPPI
                     WLYATI"
     gene            complement(1666..>3049)
                     /locus_tag="VFN38_02415"
     CDS             complement(1666..>3049)
                     /locus_tag="VFN38_02415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-binding dehydrogenase"
                     /protein_id="HET9010633.1"
                     /translation="RRWAEAYLQFAHTEKRAWLREKGMRFFPVVGWAERGGYTATGPG
                     NSVPRFHVTWGTGPGVLEPFLRRVREGKGQGRISLRFRHRVSELTTSGGGVDGVRGEM
                     LAPSDAVRGAASARTVAGDFALRASAVIVTSGGIGGNQELVRASWPARLGSPPAHMLS
                     GVPEHVDGLMLGVAESAGARVINRDRMWHYTVGIENWAPIWKRHGIRILPGPSSLWID
                     ARGRRLPPPLFPGFDTLATLEHLSRSGSAHSWFVLTQAIIEKEFALSGSEQNPDLTGR
                     SIRKTLSRVLPGAPAPVEAFKQHGVDFIVERSLDALVRRMNALTGGELIDVVALKREI
                     DARDGQFDNAFGKDAQITAMYGARRYLGDKLVRVAKPHRLLDPSAGPLIAVRLSILTR
                     KTLGGLETDLSGRVLGADGNPVPGLYAAGEVAGFGGGGMHGYRALEGTFLGGCLFSGR
                     TAGRAAAMSS"
BASE COUNT          447 a         1051 c         1060 g          491 t
ORIGIN      
        1 tgatggtggc gtacagccag atggggggct ggtcggtggg ggcgaagaac gaacggtact
       61 tggtggtctt cgtctgcacg ttgttgaagt agtcccaggc gtcggcgacc acctgcggcg
      121 tgagcaggat gtcgagcatc gtcatcgcct gcaccttcgc gcccgcgacc acccccttgt
      181 gggcgatcgg cgtggccatg gagatcgcgt tcgcccagtt gtgtcccggg gtgcccggga
      241 tgttcgacgg gtagttgagc gtgatcgtcg gcacgttcca gctcacgtcg ccgatgtcgt
      301 ccgagccgcc gcccatgcgc gtcgcctcgt tcaccggtcc gccgaggcgg ccggggcgcg
      361 tggagagacc gctgtccggc accgccagtt cgcgctggag cgccttcgcc agggtctggt
      421 ccttctcgtc ccacgtcggc gtgccgacct tctcgatgtt gcggtacatc gcctcggcga
      481 tcgggcgcga gaagtgtcca ctccacccgg agccgaccat catcaccgtg tcgatctggg
      541 tgccggtcat catcgtggcg ccctgcgcca tcttcttcgc atcctcgaac atggcgaggg
      601 tgcgctcgta gtcgcgctcc cggaagtaga accagatgct cgccgtgctc ggcacgacgt
      661 tcggctggtc gccgccatcg gggatgacgt agtgcgaccg ctgcggcagc tccatgtgct
      721 cgcgatggaa ctcccatgcg ttggccatca gcatcacggc gtcgagcgcg ctcttgccgc
      781 gccatggcgc gccggccgcg tgcgcgctcg agcccttgaa cttgaagatg gccgagatga
      841 gcgcgttgtt gcccgactgc ccccacgaca cggcgagggc gttgccgacg tgcgtgaaga
      901 gagtgacgtc gacgtccttg aacacgccgg cacggacgag aaaggccttg ccggccatct
      961 gctcctcggc cacgccgggc cagaggacga gcgtgccggg gatgtggtcg cgctccatga
     1021 tcttcttcac gacgatggcc gccgcgatgt tgagcggcat gccggagttg tgcccttcgc
     1081 cgtggcccgg cgcgccggcg atcatcggat cgtggtagcc gacgccgggc ttgttcgagg
     1141 cctgggggat gtcgtcgatg tcgctgccga gggagatgac cggcttgccc gagccccact
     1201 tcgcgacgaa tgccgtgggg atgcccgcga cgccacgctc gaccttgaag ccgttctcct
     1261 cgagaatgcc ggtgaggtag cgcgacgtct cgatctcctg gaatccgagc tcgccgtacg
     1321 agaagacctg gtcgaccatc acctggatca tcttcgcctt cgcgtcgatc tcgcgcaccg
     1381 cttcggcctt gagcgcgtcg agctgcggcg tgccggcata cttgtacttg atcgagtcgg
     1441 cgtagttgcc tgcgccccgc tgtgcggccg ccgtggacgg cgcggcgaga acgagggcgc
     1501 acgcgacgag cgtggcgagg cagcggacgg cgggtcgggc catgcagcgg gctccttgtg
     1561 gtgggaagtt acgccaaagc tacgaaagtc aagacgattg cgttgagcgc ccgtcgtccc
     1621 gagcggagcg gagggacctg cacgtgcggg tccttcgcct gcggctcagg acgacatggc
     1681 ggcggcgcgc cccgccgtgc gccccgagaa gagacagccg ccgaggaacg tcccctccag
     1741 cgcgcgatag ccgtgcatgc ctccgccgcc gaagcccgcc acctcgcccg cggcgtacag
     1801 gcccggcacc gggttgccgt cggcgccgag cacccgaccc gagaggtcgg tctcgagccc
     1861 gcccagcgtc ttgcgggtga ggatcgagag ccgcaccgca atgagtggcc cggccgaagg
     1921 atcgagcagc cggtgcggct tcgcgacgcg aacgagcttg tcgccgagat agcggcgcgc
     1981 gccgtacatg gccgtgatct gcgcgtcctt gccgaacgcg ttgtcgaact gcccgtcccg
     2041 cgcgtcgatc tcgcgcttca gcgccacgac gtcgatcagc tctccgccgg tgagcgcgtt
     2101 catgcgccgt acgagcgcat cgagcgagcg ttcgacgatg aagtccacgc cgtgctgctt
     2161 gaacgcttcc acgggagcgg gggcgcccgg cagcacgcgg ctcaacgtct tccggatgct
     2221 gcgcccggtg agatcgggat tctgctcgga tcccgagagc gcgaactcct tctcgatgat
     2281 cgcctgcgtg agcacgaacc agctgtgcgc cgacccgctg cgtgacagat gctcgagcgt
     2341 ggcgagggta tcgaagccgg ggaacagcgg cggcggcagt cgccgcccgc gcgcgtcgat
     2401 ccagagcgac gacggtccgg gaaggatgcg aatcccgtga cgtttccaga tcggcgccca
     2461 gttctcgatc cccacggtgt agtgccacat ccgatcgcgg ttgatcaccc gcgcgccggc
     2521 cgactcggcg acgccgagca tgagaccgtc cacgtgctcg gggacgccgg agagcatgtg
     2581 cgcgggaggg ctgccgagac gcgcgggcca gctcgcgcgc acgagctcct gattgccgcc
     2641 gatgccgccc gaggtcacga tcaccgccga cgcacgcagc gcgaagtcgc ccgcgaccgt
     2701 gcgtgcgctc gcggcgccac gcaccgcgtc gctcggcgcg agcatctcgc cgcgcacccc
     2761 atcgacgccg ccgccggacg tcgtgagctc gctcacgcga tggcgaaagc gcaggctgat
     2821 tcgtccctgc cccttgccct cccgcacgcg acggagaaac ggttcgagca cgccggggcc
     2881 ggtgccccac gtgacgtgga agcgcggcac cgagttgccg gggccggtgg cggtataccc
     2941 gccgcgttcg gcccagccga ccaccgggaa gaagcgcatc cccttctcgc gcagccacgc
     3001 ccgcttctcc gtgtgcgcga actgcaggta cgcctcggcc cagcggcgg
//
LOCUS       DASSYW010000152         2107 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_991207, whole genome shotgun sequence.
ACCESSION   DASSYW010000152 DASSYW010000000
VERSION     DASSYW010000152.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2107)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2107)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2107
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_991207"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            34..1695
                     /locus_tag="VFN38_02420"
     CDS             34..1695
                     /locus_tag="VFN38_02420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010634.1"
                     /translation="MAIFRAPAPQDHWGSSVTRAMHSSGGQQRPTSTGTTSDGHRDMT
                     VRRVVAVSPADVLEREARLFEALERAFPVRFVSRRGLNRSCDAAIVADASRPPADIPT
                     VMLRRGASTSQSVTLAASEPVDRRLWGITLPTRSCGGEVEVNETDLVLAGARGRAMWV
                     RTPGPASVDRVGVAMPGLASDEVLRDALVPERALGLIAIIDLLRRVTGDIAYEPPPIR
                     AALLFDDPNLRWRSYGHIDYRQLLRHAEEHGYHAAMAMIPLDASRPHAAAASMFRQHS
                     ERLSLVIHGNNHERLELMQPKNVGVALELGAQALRRVSRFEASSGVHVAPIMVPPHGM
                     CSPTMAGALAALPFDALCAIHPYPWTEKPPSHDLLAGWAPASFADGCAVILRLPFGVT
                     ATEIALRAYIDQPIVLYGHHEDVAEGLDVLAEAASRVNRLGAVKWTSLEEIARGNAGV
                     RRDGNTISLRAYSHAMRIPDGADSLMIARPDGDRGLRGWSFDGEREVNPFDQPIPVAA
                     GAVHVRLRRLFERHPAAVSLPRPRVWPRLRRIATESRDRLSAVRP"
BASE COUNT          304 a          737 c          719 g          347 t
ORIGIN      
        1 gctcggcact cacagcctat gaacgctgcg acgttggcga tcttccgcgc ccccgcgcca
       61 caagatcact ggggctcatc cgttactcgg gcgatgcaca gctccggagg gcaacagcgg
      121 ccgacgtcga cgggcacgac gtccgacggc caccgggaca tgaccgtgag acgcgtcgtc
      181 gccgtgtccc cggccgatgt gctcgagcgc gaggcgcgtc tcttcgaggc gctggagcgg
      241 gcgttccccg ttcgtttcgt ctcgcggcgc gggctcaatc gatcgtgcga tgccgcgatc
      301 gtggcggacg cctctaggcc gcccgcggat ataccgaccg tcatgctccg caggggggcc
      361 tccacgtcgc agagcgtgac attggccgcc tcggagccgg tcgaccggcg cctgtggggc
      421 atcacgttgc cgacgcgatc gtgcggcggt gaggtcgagg tgaacgagac cgacctcgtc
      481 ctcgcgggtg cccgcggacg cgcgatgtgg gtacgaacgc ccggccccgc ctcggtcgac
      541 cgcgtgggtg tggcgatgcc ggggctcgcg agcgacgaag tgctgcgcga cgccctggtc
      601 ccagagcgtg cgctcggcct gatcgcgatc atcgacctgc tgcggcgagt gaccggcgac
      661 atcgcgtatg aaccgccgcc gatccgcgcc gcgctgctgt tcgacgaccc gaacctgcgc
      721 tggcgcagct acggccacat cgactaccgg caactcctgc ggcatgcgga ggagcacggc
      781 tatcacgccg cgatggccat gatcccgctg gacgcctcgc ggccgcacgc ggcggcagca
      841 tcgatgttca gacagcactc cgagcgcctc tcgctcgtga tccacggcaa taaccacgag
      901 cggctcgaac tcatgcagcc caagaacgtc ggcgtcgccc tcgaactcgg agcgcaggcg
      961 ctgcgccgcg tgtcgcgctt cgaggcgtca tccggtgtcc acgtggcgcc gatcatggtt
     1021 cccccgcacg ggatgtgctc gcccaccatg gccggggcgc tcgcggcact gccgttcgac
     1081 gcgctgtgcg cgatccatcc atacccgtgg accgagaagc ctccgtcgca cgacctcctc
     1141 gccggttggg ctcccgcatc gttcgcggat ggctgcgccg tcatcctgag actgccgttc
     1201 ggcgtgaccg cgaccgagat cgctcttcgc gcgtacatcg accagccgat cgtgctctac
     1261 ggccatcatg aggacgtcgc cgaaggactt gacgtcttgg ctgaagcagc gtcgcgcgtg
     1321 aacaggctcg gcgccgtgaa atggacctcg ctcgaagaga ttgctcgcgg caacgccggc
     1381 gtccggcgcg acggtaacac catctcgctg cgggcctact cccacgcgat gcgcattccc
     1441 gacggcgcag attcgctgat gatcgcgcgg cctgacggcg atcgcggact gcgcggctgg
     1501 agcttcgatg gcgagcggga agtcaatccc ttcgatcagc ccatccctgt cgcggcaggt
     1561 gccgttcacg tgcggctgcg tcggctcttc gagcggcatc ccgccgcggt atcgctgcca
     1621 cgcccgcggg tctggccgcg cctgcgccgc atcgccaccg agtcgcgtga ccggctgagc
     1681 gccgtgaggc cctgagcgac cagcggctcg tccgcctttc gctgttctga cgcgaccggt
     1741 tgagttcgcc tcgagcggcg tatcaacccc gcgagccttc gcgctgccgc tccgctcgtt
     1801 gcggctttgg tcgacgctcg gcgtttgagg tgtcgtacca gggattgcgg gtaccacccg
     1861 ttcgtccaga caggggacgt gcgctcaatc gcatgtcggg agttcccgat gatcgagcgt
     1921 ggtgcccgcg cgtgtcccgg cttcccggga cggcgggcat gaaagtcggt gggtcgaccc
     1981 ggggacctta agagaccggg actgacggga gcagggacgt gcatgcaggt tcccatgtga
     2041 cgagctggcg cgccagcccg gcggctaatc gatgccgcgg ctgtatgacg cgcccgaccg
     2101 gaggtac
//
LOCUS       DASSYW010000153         2874 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_352863, whole genome shotgun sequence.
ACCESSION   DASSYW010000153 DASSYW010000000
VERSION     DASSYW010000153.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2874)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2874)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2874
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_352863"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..294
                     /locus_tag="VFN38_02425"
     CDS             <1..294
                     /locus_tag="VFN38_02425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010635.1"
                     /translation="LVHAIVTSPTERVTRDGVRRALRSALERSREWQLADVAIPPLGL
                     GAGNLEIEESAQLMADELRAHRRGSEYPRRVTLVAETPDEASVLEHAVARSAA"
     gene            294..1865
                     /locus_tag="VFN38_02430"
     CDS             294..1865
                     /locus_tag="VFN38_02430"
                     /inference="COORDINATES: protein motif:HMM:NF013961.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase-like domain-containing protein"
                     /protein_id="HET9010636.1"
                     /translation="MRRPGRRASIAIGILVLWLAGLGVLVQRELFRPHAEHLAEAGMR
                     VTPSATFFAVLQRGEQIGFASSTVDTTDGGITQEDYLVADLAIAGKLHRASARTSVKL
                     SRGLRLRSFSLDVDADLAPIKAAGTVVGDSLLLLTVDGVAGQPTDTQRVRLTGPVLLP
                     TLLPIAVALGQRPRPGATYTLPVFDPRSMSTRDMQVAVLAESVFVLPDSSVFDAATKR
                     WLGARPDTIRAWKLGTPATSAASGSSGFDGWVDEQGRLVLVNQLLGLTLERRPYEVAF
                     ENWKADALKRGTQVTADRDIYEMSAISANKRLRKNLAELKVRLTGVELDRFDVKGYRQ
                     KLRGDTLTITREDASALRATYGLPNGARSTVNAVFLDAEPLLESDNPAIRSLAIRLRG
                     AEKDPAVVAERINRWVYDSLRKEITVGVPSALATLRSRVGDCNEHTQLAVALLRAAGI
                     PARVAAGLAYVDDKFYYHAWPEVWLERWVAADPTFGQFPADASHLRFTVGGLGRQAEL
                     LRLMGALHVDVISAH"
     gene            1911..2669
                     /locus_tag="VFN38_02435"
     CDS             1911..2669
                     /locus_tag="VFN38_02435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HET9010637.1"
                     /translation="MISLRRLTKQYGSFTAVDAIDLEVPRGELFGFLGPNGAGKTTTL
                     RMIAGILRPTSGQISIAGVDLAADPIGAKMKLGFIPDRPFIYEKLTGAEFLRFVAGLY
                     DQEGPEVEHRGRELLALFDLEEWKDELVESYSHGMRQKLIISSAFVHRPEVIVVDEPM
                     VGLDPKAAKILKDLFREYTRRGHTIMMSTHTLEVAETLCDRVAIIAKGTIRACGTMDE
                     LRRSADEGTRGLEQIFLRLTGENAARELVEVLDA"
     gene            2662..>2874
                     /locus_tag="VFN38_02440"
     CDS             2662..>2874
                     /locus_tag="VFN38_02440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010638.1"
                     /translation="MPEAPSVAGRPDPSLFLLLRPKWLTARARAMSNERGRGARFGLL
                     ATMGVLFWAFIYTVLFKLLVYFRGVPD"
BASE COUNT          415 a          997 c         1036 g          426 t
ORIGIN      
        1 ctcgtgcacg cgatcgtgac gagccccacg gagcgcgtca cgcgcgacgg cgtgcgtcgg
       61 gcgctgcgca gcgcgctcga gcgttcgcgc gaatggcagc tcgccgacgt cgcgatcccg
      121 ccgctcggcc tcggcgccgg caacctcgag atcgaggaga gcgcccagct gatggccgat
      181 gagctgcgcg cgcaccgccg cggctccgag tacccgcggc gggtgacgct cgtggcggag
      241 acgccggacg aggcgagcgt gctggaacac gccgtggcgc ggagcgccgc ctgatgcgcc
      301 ggcccggcag gcgcgcgtcg atcgcgatcg gcatcctggt gctgtggctc gccggcctcg
      361 gggtgctcgt ccagcgcgag ctcttccgcc cgcacgccga gcatctcgcc gaggcaggca
      421 tgcgggtgac gccgagcgcc accttcttcg cggtgctcca gcgcggcgag cagatcggat
      481 tcgcgtcgtc cacggtggac accacggacg gcggcatcac gcaggaggat tacctcgtcg
      541 ccgacctggc gatcgccggc aagctgcacc gcgcgagcgc gcgcacgtcg gtgaagctgt
      601 cgcgcgggct gcgcctccgg tcgttctccc tcgacgtgga cgcggacctc gcgccgatca
      661 aggcggcggg caccgtcgtg ggcgactcgc tgctgctcct cacggtggac ggcgtcgccg
      721 gccagccgac ggatactcag cgcgtgcggc tcaccgggcc ggtgctgctg cccacgctgc
      781 tgccgatcgc cgtcgccctc gggcagcggc cgcgccccgg cgccacgtat acgctcccgg
      841 tgttcgatcc gcgctcgatg tcgacgcgcg acatgcaggt ggccgtgctg gccgagagcg
      901 tcttcgtgct gccggacagc agcgtgttcg acgcggcgac gaaacggtgg ctcggcgcac
      961 gcccggacac gatccgtgcg tggaagctcg gcaccccggc gacgtccgcg gcgagcggat
     1021 cgtccggctt cgacggctgg gtggacgaac agggacgcct cgtgctggtg aaccagctcc
     1081 tcgggctcac cctggagcgc cggccgtacg aggtggcgtt cgagaactgg aaggccgatg
     1141 cgctgaagcg gggcacgcag gtgaccgccg accgcgacat ctacgaaatg tcggcgatca
     1201 gcgcgaacaa gcggctgcga aagaacctcg ccgagctgaa ggttcggctc accggagtgg
     1261 agctcgaccg cttcgacgtg aaggggtacc ggcagaagct gcgcggcgac acgctgacca
     1321 tcacccggga ggacgcgtcc gcgctgcgtg cgacctacgg cctgccgaat ggcgcccgat
     1381 cgaccgtgaa cgccgtgttt ctcgatgcgg agccgctgct ggagtcggac aatccggcca
     1441 tccggtcgct cgccatccgc ctgcggggcg cggagaagga tcccgcggtg gtggcggagc
     1501 ggatcaaccg ctgggtgtac gactcgctgc gcaaggagat cacggtcggg gtgccgagcg
     1561 ccctcgccac gctccggagc cgggtgggcg actgcaacga gcacacccag ctggccgtcg
     1621 cgctgctgcg cgcggcgggc attccggcgc gggtcgcggc cggcctcgcc tacgtggacg
     1681 acaagtttta ctaccacgcg tggccggaag tctggttaga gcggtgggtg gcggcggatc
     1741 cgaccttcgg tcagttcccc gccgacgcgt cccatctgcg cttcaccgtc ggtggactcg
     1801 gccgccaggc cgaattgctg cgcctcatgg gggcgctgca cgtcgacgtc atctccgctc
     1861 actaggcggc cgcgcgctcc cgggcgtgtg gacgcccctg cccttcgtgc atgatcagcc
     1921 tgcgccggct caccaagcag tacggcagct tcaccgccgt ggacgcgatc gacctcgagg
     1981 ttccccgcgg cgagctgttc gggtttctcg gcccgaacgg tgccggcaag acgaccacgc
     2041 tgcggatgat cgccggcatc ctgcgtccca cgagcggtca gatctcgatc gccggggtgg
     2101 acctcgccgc cgatccgatc ggggcgaaga tgaagctcgg gttcatcccg gaccgtccct
     2161 tcatatatga gaagctgacc ggcgccgagt tcctgcgctt cgtggccggc ctgtacgacc
     2221 aggaagggcc cgaggtggag caccgcgggc gcgagctgct cgccctgttc gacctcgagg
     2281 agtggaagga cgagctggtg gagagctaca gccacggcat gcgccagaag ctgatcatct
     2341 ccagcgcgtt cgtgcaccgg ccggaggtga tcgtcgtgga cgagccgatg gtcgggctcg
     2401 accccaaggc ggccaagatc ctgaaggacc tgttccgcga gtacacccgc cgcggccaca
     2461 cgatcatgat gagcacgcac accctcgagg tggcggagac gctctgcgac cgcgtggcca
     2521 tcatcgccaa ggggacgatc cgcgcctgcg gcacgatgga cgagctgcgg cgcagcgccg
     2581 acgaggggac gcggggactc gagcagatct tcctgcgact caccggcgag aacgcggcgc
     2641 gcgagctggt cgaggtgctg gatgcctgag gccccgtcgg tcgccgggcg tccggaccca
     2701 tcgctcttcc tgctgctccg gcccaagtgg ctcaccgcgc gcgcgcgcgc gatgtcgaac
     2761 gaacgggggc gcggcgcgcg cttcggcctc ctcgccacga tgggcgtgct gttctgggcc
     2821 ttcatctaca cggtgctgtt caagctgctc gtgtatttcc ggggcgtgcc cgat
//
LOCUS       DASSYW010000154         2397 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_983062, whole genome shotgun sequence.
ACCESSION   DASSYW010000154 DASSYW010000000
VERSION     DASSYW010000154.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2397)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2397)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2397
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_983062"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..302
                     /locus_tag="VFN38_02445"
     CDS             <1..302
                     /locus_tag="VFN38_02445"
                     /inference="COORDINATES: protein motif:HMM:NF017015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HET9010639.1"
                     /translation="EALLALGLDAGGRVPPSKRYVWRNLALDVAHVLTYFVAHEAHHR
                     GQIVMVSRQLGHSLPREVTAGLWQWRPRTADTAGATPTAAPRRERAGRRRQRAPR"
     gene            complement(488..>2397)
                     /locus_tag="VFN38_02450"
     CDS             complement(488..>2397)
                     /locus_tag="VFN38_02450"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HET9010640.1"
                     /translation="RIVLHPRPLSESVTVTASRGASGVDTRASASVVSSAELLTSAAG
                     AIDDALRNTPGFSLFRRSSSRVANPTTQGVTLRGVSGSGASRTLVVADGWALNDPFGS
                     WVYWNRVPVAAVDRIEVVRGATGDLYGADALGGVIQVLTLDADRPRLRALVEGGSKST
                     FRTSGFAGRRFGSVLVSGGVEVQNTDGAYVVAEDDRGAVDVPADSDYQSGFATAGYAR
                     NSFRANVRGHVAAEDRGNGTPLQINDTEWRQISGDANGALAGGYWTARITGGTQEYFQ
                     TFSAIAADRQSERLTNDQTIPGDFLSAGGQWIRTWRRADVLVGAEGRRTTADVNETRY
                     PVTGAPVSTSLLDVAENNLSAFGRIRLALRDDLSVVLGARGDHWESAESLGFFSPRAT
                     VTWRARAAASLQFSVSRAYRTPTLNELYRGFRVGNAVTNANPLLQPERLTSIEGGLLI
                     GTAKASARVTAFHNVLNDAISNVTLSTTPTQITRERQNTDEVGASGVELEGDIRPHPR
                     VTLSLFGAFTSSHFNETPKQPTIEGNRIPQVPRYHIGAGVIADTPRVATFSVQARFVG
                     DQFEDDLNTLVLEDFVVVDASATRQVTRALHAFVGVENVFDVEYDVGRTPVRSIGWPR
                     TVRAGVRVFLP"
BASE COUNT          367 a          811 c          866 g          353 t
ORIGIN      
        1 tggaagcgct gctcgcgctt ggcctcgatg ccggcggccg cgtcccgccg tcgaagcgct
       61 atgtctggcg caacctcgcg ctcgacgttg cgcacgtcct gacctatttc gtcgcccacg
      121 aggcgcatca ccgcggccag atcgtcatgg tctcgcgcca gctcggtcac agcctgccgc
      181 gtgaggtcac ggccggcctc tggcaatgga ggccgcgcac cgctgacact gccggcgcaa
      241 cgcccaccgc agctccgcgg cgtgagcgtg caggacggcg acggcagaga gcgcctcggt
      301 gagagttgga ggaggcggag ttggaggagg cggagttgga ggagccggag ttggaggagg
      361 cggagtttac ggagggaacg ggatcaaacc ggaggaacgg aggcacggag agtggatacg
      421 ggcgcgatcg cgtcgtcgcc gcccgtcctg tctggcgctc taaacgactc cccgcccgcc
      481 gcgactgcta gggcaggaac acccgcactc cggccctcac cgtccgcggc cagccgatgc
      541 tgcggaccgg cgtgcggccg acgtcgtact cgacgtcgaa cacgttctcg acgccgacaa
      601 acgcgtgtag cgcgcgcgtc acttgccgcg tcgccgacgc gtcgacgacg acgaagtcct
      661 cgagcacgag cgtgttgagg tcgtcttcga actgatcgcc gacgaagcgg gcctgcaccg
      721 agaacgtcgc cacgcgcggc gtgtcggcga tcacgccggc gccgatgtgg tagcgcggca
      781 cctgcgggat gcggttgcct tcgatcgtcg gctgcttcgg cgtctcgttg aaatgcgagg
      841 acgtgaaggc gccgaagagc gacagggtga cgcgcgggtg cggccggatg tcgccttcca
      901 gctcgacgcc ggatgcgccg acctcgtcgg tgttctggcg ctcgcgcgtg atttgcgtcg
      961 gcgtcgtcga cagggtgacg ttcgagatcg cgtcgttgag gacgttgtgg aaggcggtca
     1021 cgcgcgctga cgctttcgcg gtgccgatca gcagtccgcc ttcgatgctc gtcagccgct
     1081 ccggctgcag cagcgggttc gcattggtga ccgcgttgcc gacgcggaaa ccgcggtaga
     1141 gctcgttcag ggtcggcgtc cgataggcgc gcgagaccga gaactgcagc gaggccgcgg
     1201 cgcgcgcgcg ccaggtcacc gtcgcgcgcg ggctgaagaa gccgagcgac tcggccgact
     1261 cccagtgatc gccgcgcgcg ccgagcacca ccgaaagatc gtcgcgcagc gccagccgga
     1321 tccggccgaa cgccgaaagg ttgttctcgg cgacgtcgag gagcgaggtt gacaccggcg
     1381 cgccagtgac cgggtagcgc gtttcgttga catccgccgt cgtgcgccgg ccttccgcgc
     1441 cgacgaggac gtccgcccgt cgccacgtcc ggatccactg cccgccggcc gacaaaaagt
     1501 cgccgggaat cgtctgatcg ttggtcagcc gctcgctctg gcgatcggcg gcgatcgccg
     1561 agaacgtctg gaagtactcc tgcgtgccgc cggtgattcg cgccgtccag tagccgccgg
     1621 ccagcgcgcc gttggcgtcg ccggagatct gccgccactc ggtgtcgttg atctgcagcg
     1681 gcgtgccgtt gccgcggtct tcagcggcga catggccgcg gacgttcgcg cggaacgaat
     1741 tgcgcgcata cccggcggtg gcgaatccgg attgataatc gctgtccgcc gggacgtcga
     1801 ctgcgccccg atcgtcttcg gcgacgacgt aggcgccgtc ggtgttctgc acttcgacgc
     1861 cgccggacac caggacgctg ccgaagcggc ggccggcaaa gccggacgtg cggaacgtgc
     1921 tcttcgagcc cccttcgacg agcgcccgca gacgcggccg gtcggcgtcg agcgtgagca
     1981 cctgaatcac gccgccgagc gcatcggcgc cgtagagatc cccggttgcg ccgcgcacga
     2041 cctcgatgcg atcgaccgcg gcgacgggaa cgcggttcca gtagacccag ctgccgaatg
     2101 gatcgttgag cgcccagcca tcggcgacga ccagagtacg gctcgcgccc gatccggata
     2161 cgccgcgcag cgtcacgccc tgcgtcgtcg ggttggcgac gcgcgacgat gagcggcgga
     2221 acaggctgaa ccccggtgtg ttgcgcagcg catcgtcgat cgcgccggcg gcggaggtga
     2281 ggagctcggc cgaggacacg accgacgcgc tcgcgcgcgt gtccacgccc gacgcgccgc
     2341 gcgaggccgt gaccgtcacc gactcggaga gcggccgcgg atgcagcacg atgcgga
//
LOCUS       DASSYW010000155         3182 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_456832, whole genome shotgun sequence.
ACCESSION   DASSYW010000155 DASSYW010000000
VERSION     DASSYW010000155.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3182)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3182)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3182
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_456832"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..485
                     /locus_tag="VFN38_02455"
     CDS             <1..485
                     /locus_tag="VFN38_02455"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HET9010641.1"
                     /translation="AGLLHHDDERVRHAATVALMRLGTARSLPTIQEALKDRAPQLRM
                     QAAAALVGRKENNVTGLLLKALDDERDEEVCASFLIALGRLATPDAVARLIATAEPDK
                     GLFRKKPVALRVAAVQGLSEARSDVAVEALKALQADKDEDVRATAVYALGRRARGQST
                     "
     gene            complement(561..1631)
                     /locus_tag="VFN38_02460"
     CDS             complement(561..1631)
                     /locus_tag="VFN38_02460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HET9010642.1"
                     /translation="MLSPSSISFLKRLLDAPAPSGYETAASRAWRAEAETFAEKVSVD
                     VAGNSMAEVNGAGLVTIMLDGHIDEIGVIVQYIDDEGYVYIAPIGGWDPQVLVGQRIR
                     FLGAKGDVLGVVGKKPIHLMKHEDREHSSKFADLWVDIGAKKRDEAELRLEIGDPGVI
                     DSRSMDFPNDRLVSRSIDDGIGAFIVLEALRRYAEKPGEARVVAAATTQEEIAWHGGG
                     ALVCAHCINPQIAIVVDVTFATDHPNVDKKEIGDHKMGGGPIISRGALISPVVHSLLR
                     ETAKTHNIAHAVHAVGRDTSTNADAIHIAREGVATGLVSIPNRYMHSPNEMVDLADVD
                     NAATLIAEFCRAVTAKTDLTAR"
     gene            1784..2119
                     /locus_tag="VFN38_02465"
     CDS             1784..2119
                     /locus_tag="VFN38_02465"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HET9010643.1"
                     /translation="MGLAAGLLSGLFGIGGGILIIPALLFFGKMEPAMATGTSLGALL
                     LPVGALGAWEYYKHGHVDVRGSLLIAGGLFVGAYFGARFAQGLDPATAKRLFAGLLLV
                     VAVRLWITA"
     gene            complement(2188..2649)
                     /locus_tag="VFN38_02470"
     CDS             complement(2188..2649)
                     /locus_tag="VFN38_02470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010644.1"
                     /translation="MVHDPSTELDPAASPPRYPWLTPVAQVRVRAVLLGIALFVGLVV
                     WVWHSLGATVPQPGDFIRKLRVVGIMTWLYALVQLVDMRFWHSGVARRRRLSLGIPES
                     LIAWLFGQMLAWFGIIYYAVTEDARWYAAGLVVLLLTFAIFPIRGDEGKTG"
     gene            complement(2680..>3182)
                     /locus_tag="VFN38_02475"
     CDS             complement(2680..>3182)
                     /locus_tag="VFN38_02475"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HET9010645.1"
                     /translation="LNHDDIPRFAELGVIPSMQAVHQTSDMYWAGSRLGLGRLLGAYA
                     WRSLLNTGVVVPNGSDFPVEAVNPLLSFHSAVSRQDAENWPAAGWMPEQRMTRDEALK
                     SMTIWPAYAAFQEAAMGSLSPGKLADFVVLDRDIMTVPERDILGTNVLATYIGGQAVY
                     ERVRLP"
BASE COUNT          487 a         1089 c         1099 g          507 t
ORIGIN      
        1 tggccggcct gctgcatcac gacgacgagc gcgtacgtca tgccgcgacg gtggcgctga
       61 tgcgcctcgg cacggcgcgg tcgctgccga cgattcagga ggcgctgaag gaccgcgctc
      121 cgcagctccg catgcaggcg gccgccgcgc tcgtggggcg caaggagaac aacgtcaccg
      181 gcctgctgct caaggccctc gacgacgagc gcgacgagga ggtgtgcgcg tccttcctca
      241 tcgccctcgg ccggctcgcg acgcccgatg ccgtggcgcg cctgatcgcg accgccgagc
      301 cggacaaggg gctctttcgc aagaagccgg tggcgctgcg cgtcgccgcg gtgcaggggc
      361 tctccgaagc gcggagcgac gtcgcggtgg aagcgctcaa ggcgcttcag gccgacaagg
      421 acgaggacgt gcgcgcgacg gccgtgtacg cgctggggcg ccgcgcgagg ggccagtcga
      481 cctgagcagg ctgtcgtcct gagcgcagcg agggacccgc gggtgcaggt ccttcgcctt
      541 cggctcggga cgacaggcga tcagcgcgcc gtgaggtcgg tcttcgccgt gaccgcgcgg
      601 cagaactcgg cgatcagcgt cgcggcattg tccacgtccg cgaggtcgac catctcgttc
      661 ggcgagtgca tgtagcgatt ggggatcgag acgagccccg ttgccacccc ctcgcgcgcg
      721 atgtggatgg cgtcggcgtt ggtggaggtg tcgcgcccca cggcgtggac cgcgtgcgcg
      781 atgttgtgcg tcttcgccgt ctcgcgcagc agggagtgca ccaccggcga gatcagggcg
      841 ccgcggctga tgatcgggcc gccgcccatc ttgtggtcgc cgatctcctt cttgtccacg
      901 ttcgggtggt cggtcgcgaa ggtgacgtcc acgacgatgg cgatctgcgg attgatgcag
      961 tgcgcgcaca cgagggcgcc cccgccgtgc caggcgatct cctcctgcgt cgtggcggcc
     1021 gcgacgacgc gcgcctcgcc cggcttctcc gcatagcggc gcaacgcctc gagcacgatg
     1081 aacgcgccga tcccgtcgtc gatcgagcgc gagacgagcc ggtcgttcgg gaagtccatg
     1141 ctccgcgaat cgatcacgcc gggatcgccg atctcgagcc gcagttcggc ttcgtcccgc
     1201 ttcttcgcgc cgatgtccac ccagagatcg gcgaacttgc tggagtgctc gcgatcctcg
     1261 tgcttcatga ggtggatcgg cttcttgccc accactccga gcacgtcgcc cttcgcgccg
     1321 aggaagcgga tgcgctggcc cacgagcacc tggggatccc agccgccgat cggggcgatg
     1381 tagacatatc cttcgtcatc gatgtactgc acgatgacgc cgatctcgtc gatgtggccg
     1441 tcgagcatga tcgtgacgag gccggccccg ttcacctcgg ccatgctgtt gcccgcgacg
     1501 tccacgctca ccttctccgc gaacgtctcg gcctccgcgc gccaggcgcg ggaggcggcc
     1561 gtctcgtagc ccgacggggc cggtgcatcg aggagacgct tcaggaagct gatcgaggac
     1621 gggctgagca tcgggggcga ttcgggttga ggcgcgatac cgtgccgaat gctagtcccc
     1681 tccccggcat cgaggaagcg cgggcactat tgttcagcaa tgcggttgcg cggtcgaaga
     1741 caagacgaca gcatgcaccc ccaggtcact catctatctc gcgatcggcc tcgccgccgg
     1801 actgctgtcc ggcctgttcg gcatcggcgg cggcatcctc atcattcccg ctctcctctt
     1861 cttcgggaag atggagccgg ccatggccac cggcacctcg ctcggcgcgc tcctgctgcc
     1921 cgtcggcgca ctgggtgcct gggagtacta caagcatggt cacgtggacg tacggggatc
     1981 cctgctcatc gcgggcggct tgttcgtagg cgcctacttc ggtgcgcgct tcgcccaggg
     2041 actcgatccg gcgacggcga agcggctctt cgcgggactg ctgctcgtcg tcgcggtgag
     2101 gctgtggatc acggcctgac ggcgttcagg gtgacgtgac gcgacagagg agaactcgtt
     2161 tcgggccctc cgcattccgt catcccgtca tcccgtcttc ccctcgtcac cccggatcgg
     2221 gaagatcgcg aaggtgagca gcagcacgac gagaccggcc gcgtaccagc gcgcgtcctc
     2281 cgtgacagcg tagtagatga tgccgaacca ggcgagcatc tggccgaaca gccaggcgat
     2341 gaggctttcc ggaatgccga gtgacaggcg ccggcgccgc gccacgccgc tgtgccagaa
     2401 gcgcatgtcc accagctgga ccagtgcata cagccaggtc atgatcccga ccacgcgcag
     2461 cttccggatg aagtcgcccg gctgcgggac ggtggcgccg agcgagtgcc acacccacac
     2521 cacgagcccc acgaagagcg cgatgcccag caggacggcg cgcacgcgca cctgcgccac
     2581 cggggtcagc cagggatagc gcggcggcga agcggcgggg tcgagctcgg tggagggatc
     2641 gtgaaccatg acgcctgctc gggtgcggcg gcttgcggac tacgggagac gtacgcgctc
     2701 gtacaccgct tgtccaccga tgtacgtcgc cagcacgttc gtgcccagga tgtcgcgctc
     2761 cggcaccgtc atgatgtcgc gatcgagcac gacgaagtcg gccagcttgc ccggagacaa
     2821 cgagcccatc gcggcctcct ggaacgcggc gtaggcgggc cagatggtca tcgacttcag
     2881 cgcctcgtcg cgcgtcatcc gctgctccgg catccagccc gccgcaggcc agttctcggc
     2941 gtcctgccgc gacacggcgc tgtgaaagct cagcagggga ttcaccgcct cgacgggaaa
     3001 gtcgctgccg ttcggcacca cgacgcccgt gttcagcagc gagcgccacg cgtacgcgcc
     3061 gagcaggcgg ccgagcccga ggcggctgcc cgcccagtac atgtcgctcg tctggtgcac
     3121 cgcctgcatc gacgggatca cgcccagctc ggcgaagcga gggatgtcgt cgtggttgag
     3181 ga
//
LOCUS       DASSYW010000156         2477 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1257410, whole genome shotgun sequence.
ACCESSION   DASSYW010000156 DASSYW010000000
VERSION     DASSYW010000156.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2477)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2477)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2477
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1257410"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..389
                     /locus_tag="VFN38_02480"
     CDS             <1..389
                     /locus_tag="VFN38_02480"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF013827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HET9010646.1"
                     /translation="FYLLCGTAAALAQTIMSPDSVVPMVGASGAIAGVMGAYFVMYPH
                     SRIVTLIPFIFLQVVEVPAVFFLGIWFLMQFLSGVGSIAQVEAGTGGVAFWAHVAGFV
                     AGVLGGLALRRPERQRPEWWHDLESR"
     gene            complement(386..>2477)
                     /locus_tag="VFN38_02485"
     CDS             complement(386..>2477)
                     /locus_tag="VFN38_02485"
                     /inference="COORDINATES: protein motif:HMM:NF024876.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HET9010647.1"
                     /translation="ALGEFKPANDEYFRPGNKVAPGDVALNTAWGDLFLEKFDRPNAL
                     KSYQDALKADANDVAAQVGLARVAAEGNPPAAKEALEKALKTNPNYVPALLLSAELAL
                     DERRRDDADASIKKALEVNPNSLEAIALRAGAAFAANKPADAESYAQAALKINPTYGE
                     VYRIIADHAARGYLFDEAATWVRKALIADPNNAQAYADLGMYLLRTGEEGEARTALER
                     AFKDDPYNVSTFNSLDLLDTLAKFQTITDGDLVFRFHPDEVAVMKEQAIPLAKEALAA
                     LSKRYEFTPKGPLLIEMFPKHDDFAVRTIGLPGMIGALGACFGRVVTLDSPRARAAGE
                     FNWGETLWHELAHVITLQMSGNRVPRWLTEGISVYEERRARPEWGKESDVSFATALSE
                     GKAIKLDVLNEAFSDPKTISLAYYQASLVVDHLVQTYGEPALWKMLRAYGRGLETAEA
                     LKDAYGISVAQLQTSFDAYTDKNYGAIVRALKAPELKEKPSLEDLKKLATEHPESYRV
                     HMALADALNTAGDKAGAIRTFERAAQLLPTANGRGNPHAYIARIAEEQKDTDRAIRAY
                     QAVLQIDNADIESARKLAALLEAKGDAARTEDAYRRLVAADPFDSKGQTGLGRLALKR
                     KDTALALRSFRSALASKPPDAAAAHADLAEALLANGQPAEAKREVLEALEIAPSFEHA
                     QDLLLKISESPGTR"
BASE COUNT          318 a          848 c          845 g          466 t
ORIGIN      
        1 cgttctatct actgtgcggc acggcggccg cgctggcaca gaccatcatg agccccgact
       61 ccgtcgtgcc gatggtcggc gccagcgggg cgatcgccgg ggtgatgggc gcctacttcg
      121 tgatgtatcc gcactcgcgg atcgtcacgc tcatcccgtt catcttcctg caggtcgtcg
      181 aagtgccggc ggtgttcttc ctcggcatct ggttcctgat gcagttcctg agcggcgtcg
      241 ggtcgattgc gcaggtcgag gcgggcacgg gcggcgtggc gttctgggcg cacgtggcgg
      301 ggttcgtcgc cggcgtgctc ggcgggctgg cactgcggcg cccggaacgg cagcgcccgg
      361 agtggtggca cgacctcgag tcgcgctagc gtgtgccggg actttcgctg atcttcagga
      421 gcaggtcctg cgcgtgctcg aacgacggcg cgatctcgag cgcctcgagc acttcgcgtt
      481 tcgcttcagc gggctggccg ttggcgagca gcgcctccgc caggtcggcg tgcgccgccg
      541 cggcgtcagg cggcttgctg gccaaggcgc tgcggaacga gcggagcgcc agcgcggtgt
      601 ccttgcgctt cagcgccagc cggccaagcc ctgtttgccc cttgctgtcg aacggatcgg
      661 ctgccaccag ccggcgatac gcgtcctcgg tgcgggcggc gtcgcccttc gcctcgagca
      721 gcgccgccag cttgcgtgcc gactcgatgt cggcgttgtc gatctgcagc accgcctggt
      781 aggcgcggat ggcgcggtcg gtgtccttct gctcctccgc gatgcgcgcg atgtaagcgt
      841 gcgggttccc gcggccgttg gccgtcggca gcagctgcgc cgcgcgctcg aacgtcctga
      901 tggcgcccgc cttgtcgcca gccgtgttca gcgcgtcggc cagcgccatg tgcacccggt
      961 agctctcggg gtgctcggtc gcgagcttct tcagatcctc gagcgacggc ttctctttca
     1021 gctccggcgc cttcagcgcg cgcacgatgg cgccgtagtt cttgtcggtg taggcgtcga
     1081 acgacgtctg cagctgcgcc acggaaatgc cgtacgcgtc cttgagcgcc tccgcggttt
     1141 cgaggccgcg gccgtaggcg cgcagcatct tccacagcgc cggctcgccg taggtctgca
     1201 ccaggtgatc gaccacgagc gatgcctggt agtacgccag cgaaatcgtc ttcggatcgc
     1261 tgaaggcttc gttgagcacg tcgagcttga tcgccttgcc ctccgacagc gccgtcgcga
     1321 acgacacgtc ggattctttc ccccactcgg gccgggcgcg gcgctcctcg tagaccgaga
     1381 tgccctcggt cagccagcgc ggtacgcggt tgcccgacat ctgcaacgtg atgacgtgcg
     1441 ccagctcgtg ccacagcgtc tcgccccagt tgaactcgcc ggcggcgcgc gcgcgcggcg
     1501 aatcgagcgt cacgacgcgg ccgaagcagg cgccgagcgc gccgatcatg ccgggcagcc
     1561 cgatggtccg cacggcgaag tcgtcgtgct tcgggaacat ctcgatgagg agcggcccct
     1621 tcggcgtgaa ctcataccgt ttcgacagcg cggccagcgc ctctttcgcg agcggaatcg
     1681 cctgctcctt catcaccgcc acttcgtcgg gatggaacct gaagacgaga tcgccgtcgg
     1741 tgatcgtctg gaacttggcg agcgtgtcga gcaggtcgag cgagttgaag gtggagacgt
     1801 tgtaggggtc gtccttgaac gcgcgctcca gcgccgtgcg cgcctcgcct tcctccccag
     1861 tgcgcagcag atacatgccg aggtccgcgt aggcctgggc attgttggga tcggcaatca
     1921 gcgccttgcg cacccacgtg gcggcttcgt cgaacagata gccgcgcgcc gcgtggtccg
     1981 cgatgatgcg atacacctca ccgtaggtgg gattgatctt cagcgccgcc tgcgcgtagc
     2041 tctcggcgtc ggccggcttg ttggcggcga acgcggcgcc ggctctgagg gcaatcgctt
     2101 cgaggctgtt cgggttcacc tcgagcgctt tcttgatcga ggcgtccgca tcgtcccggc
     2161 ggcgctcgtc gagcgccagc tccgccgaca gcagcagcgc cggcacgtaa ttggggttgg
     2221 tcttgagcgc cttctcgagc gcttccttcg ccgcgggcgg attgccttcg gccgccacgc
     2281 gcgccagccc cacctgcgcg gccacgtcgt tcgcgtccgc tttcagcgcg tcctgatacg
     2341 acttgagcgc gttcggccgg tcgaacttct cgaggaacag gtcaccccac gccgtgttca
     2401 gggccacgtc tcccggcgcc accttgttgc ccggacggaa gtactcgtcg ttggccggct
     2461 tgaactcgcc cagcgcc
//
LOCUS       DASSYW010000157         2926 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_503745, whole genome shotgun sequence.
ACCESSION   DASSYW010000157 DASSYW010000000
VERSION     DASSYW010000157.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2926)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2926)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2926
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_503745"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(115..1320)
                     /locus_tag="VFN38_02490"
     CDS             complement(115..1320)
                     /locus_tag="VFN38_02490"
                     /EC_number="2.3.1.29"
                     /inference="COORDINATES: protein motif:HMM:NF005394.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008890 - glycine C-acetyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine C-acetyltransferase"
                     /protein_id="HET9010648.1"
                     /translation="MTLNAKFTAGLEAKLQQLRDEKVYKRLNYLDSPQGARVKMEGRG
                     EVLILSSNNYLGLSNEPAVVDAGIEGLERFGAGTGSVRFICGTFTVHRDLEEALARFV
                     GTEASMSYVSAWNANEGLTATVVEEGDFVVSDALNHASIIDSIRLAKSITKCQTAVYK
                     HADLDDLRAKLAAASGAKRRLVWSDGVFSMEGSIAPLPDLLQICRDHDAVLIIDDSHA
                     TGVLGTTGRGVAEHFGVLGEVDIITSTLGKALGGAAGGFVAGSAALCDYLTQRSRPQL
                     FSNALPPTVASSALAAVEFIEANPQRVAALRENSRYFRERIIEAGFKPLAGETPIIPI
                     IVGETSAAIQMSDMLLDEGVFVTGFGFPVVPQGQARIRCQISAAHTRDDLDEAVTAFI
                     KVGRKLKLI"
     gene            complement(1409..2455)
                     /gene="tdh"
                     /locus_tag="VFN38_02495"
     CDS             complement(1409..2455)
                     /gene="tdh"
                     /locus_tag="VFN38_02495"
                     /EC_number="1.1.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008743 - L-threonine 3-dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006567 - threonine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonine 3-dehydrogenase"
                     /protein_id="HET9010649.1"
                     /translation="MRALVKTTAGPGFVLRDVPRPQIRDDEVLIEVRRAGVCGTDVHI
                     YDWDAWAQGRCRPPFTVGHEFAGDVVEVGRLVTDVKEGDRVTAEGHIVCGRCHLCRTG
                     NAHVCPNTRIIGVDRDGCFADYIAMPATNVWHLDAAVSHEIGGIHDPMGNAFHTALVG
                     TEMSGKTVLVTGCGPIGIFAVGICRAAGASRIIASDVNTTRLALARTMGAHDAVTPQQ
                     AEAAVQAATGGLGVDVVLEMSGVPSAIHQAFALVRVGGRVQMLGIPAKPMEVNFATEI
                     IFKGITVYGVVGRKMYDTWIQMTQFLRSGQFDPTPVITHRFPLEQFDDAIAAIKGGEA
                     GKVVFEISEDGRTE"
     gene            complement(2576..>2926)
                     /locus_tag="VFN38_02500"
     CDS             complement(2576..>2926)
                     /locus_tag="VFN38_02500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010650.1"
                     /translation="RPKAFVNERGDFVFHDVEPGDYGLLRFSADGQWYYLLTGDKENN
                     KRFIVKATPGGVHYVGSWRVTGVKDNRFTPDEFSIDRVETPSRQTVLERLRPVLAGTG
                     WERKVGSAKGKSGG"
BASE COUNT          458 a         1031 c          962 g          475 t
ORIGIN      
        1 tggatggcgc cgcgcatgct cggcggcgcg cgctatgggg cccgcgtgcg gagcgtggga
       61 gagccggaca ccgcgagttg gaagcgtctc gtcatcgcgg tgcggcgcgt ctgatcagat
      121 cagcttcagc ttgcgcccca cctttatgaa cgccgtcacg gcctcgtcga ggtcgtccct
      181 cgtgtgggca gcggagatct ggcagcgaat ccgggcctgc ccctgcggca ccaccggaaa
      241 gccgaacccc gtcacgaaga ccccttcgtc gagcagcatg tcgctcatct ggatcgcggc
      301 cgacgtctcg ccgacgatga tcgggatgat gggcgtctcc ccggccagtg gcttgaaccc
      361 ggcttcgatg atgcgctcac ggaagtaacg cgagttctca cgcagcgccg ccacccgctg
      421 cgggttggcc tcgatgaact ccaccgccgc cagcgcgctc gacgccacgg tgggcggcag
      481 ggcgttggag aagagctgag gccgcgagcg ctgcgtcagg taatcgcaga gggccgcgga
      541 gccggccacg aatccgcccg ccgccccgcc gagcgccttg ccgagcgtcg acgtgatgat
      601 gtccacctcg ccgagcacgc cgaaatgctc cgcgacgccg cgtcccgtcg tgccaagcac
      661 cccggtggcg tgcgagtcgt cgatgatgag cacggcgtcg tgatcgcggc agatctgaag
      721 caggtcgggg agcggcgcga tggacccttc catggagaac acgccgtcgc tccacacgag
      781 ccgccgcttc gctccgctcg ccgccgcgag cttggcgcga aggtcgtcca ggtcggcatg
      841 cttgtagacg gccgtctggc acttcgtgat cgacttcgcg agccggatcg aatcgatgat
      901 cgaggcgtgg ttcagcgcgt ccgagacgac gaaatcgccc tcctccacga ccgtggccgt
      961 gagcccctcg ttggcgttcc acgccgacac gtacgacatc gacgcctcgg tgccgacgaa
     1021 gcgcgcgagc gcctcctcga ggtcgcggtg cacggtgaag gtgccgcaga tgaagcggac
     1081 gcttcccgtg cccgccccga agcgctcgag tccctcgatg cccgcgtcga cgaccgccgg
     1141 ctcgttcgac agtccgaggt agttgttcga cgaaaggatc agcacctcgc cgcgtccctc
     1201 catcttcacc cgcgcgccct gcggcgagtc gagatagttg aggcgcttgt agaccttctc
     1261 gtcgcgcagc tgctgcagct tggcttcgag gccggcggtg aacttcgcgt tgagagtcat
     1321 gggaagacag gatgacggaa ggacggaagg acggaaatga cggatgagcg gagggcggga
     1381 cgctgggtac gcgcgtcccg tcatcctgtc attccgtcct cccgtcctcc gagatttcga
     1441 acaccacctt tcccgcctcg ccacccttga tcgccgcgat ggcgtcgtcg aactgctcca
     1501 ggggaaagcg gtgcgtgatc accggggtcg gatcgaactg gccggagcgc aggaactgcg
     1561 tcatctggat ccacgtgtcg tacatcttcc gccccacgac gccgtagacc gtgattccct
     1621 tgaagatgat ctcggtcgcg aagttcactt ccatcggctt ggcgggaatc ccgagcatct
     1681 ggacacgacc gcccacccgc accagcgcga acgcctgatg gatcgcgctc ggcacgccgg
     1741 acatctccag caccacgtcc acgcccaggc ctcccgtcgc ggcctgcacc gccgcctcgg
     1801 cctgctgcgg ggtgacggca tcgtgggcgc ccatcgtgcg cgcgagcgcc aggcgcgtcg
     1861 tgttcacgtc gctcgcgatg atccgcgatg cgccggctgc gcggcagatg ccgacggcga
     1921 agatgccgat cggcccacac ccggtgacga gcacggtctt gcccgacatc tccgtgccga
     1981 cgagggcggt gtggaacgcg ttccccatcg gatcgtggat cccgccgatc tcgtgggaga
     2041 cggccgcgtc cagatgccac acgttggtgg ccggcatcgc gatgtagtcg gcgaagcagc
     2101 cgtcccggtc cacgccgatg atcctggtgt tggggcacac gtgtgcgttg ccggtgcggc
     2161 agagatggca tcgcccgcag acgatgtgcc cctcggccgt cacgcgatcg ccttccttca
     2221 cgtcggtgac gagccgtccc acctccacga cgtcgccggc gaactcgtgg ccgacggtga
     2281 acgggggacg gcagcgcccc tgcgcccacg cgtcccagtc gtagatgtgc acgtcggtgc
     2341 cgcacacccc ggcgcggcgc acctcgatca ggacctcgtc gtctcggatc tgcggccgcg
     2401 ggacgtccct gaggacgaag ccgggacccg ccgtggtctt tacaagcgct ctcacaggcg
     2461 catcgctcgc tgctcggagt gaatcggacg ccgcgccgat gcgcggcgag cacgaaacct
     2521 cgcgggtcgg cgcacccgat ggaagtgcgg gtgcgcgagc acggcaccgt gccgatcagc
     2581 cccccgactt gcccttggcg ctgccgacct tgcgctccca cccggttccc gcgagcaccg
     2641 gacgcaggcg ctccagcacc gtctgccggc tcggcgtctc cacccggtcg atcgagaact
     2701 cgtccggcgt gaagcggttg tccttcacgc cggtcacgcg ccacgatccc acgtagtgca
     2761 cgccgcccgg cgtcgctttc acgatgaagc gcttgttgtt ctccttgtcg cccgtgagca
     2821 ggtagtacca ctgcccatcc gcgctgaagc ggagcaggcc gtaatcgcca ggctccacgt
     2881 cgtgaaacac gaagtcgccg cgctcgttca cgaacgcctt cggacg
//
LOCUS       DASSYW010000158         2042 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1424967, whole genome shotgun sequence.
ACCESSION   DASSYW010000158 DASSYW010000000
VERSION     DASSYW010000158.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2042)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2042)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2042
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1424967"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1455)
                     /locus_tag="VFN38_02505"
     CDS             complement(<1..1455)
                     /locus_tag="VFN38_02505"
                     /inference="COORDINATES: protein motif:HMM:NF024206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HET9010651.1"
                     /translation="MFARALAAAVVAAALLQATTAAAAGKVPLVDAADRGDLSAVRTL
                     LTQKADVNAAREDGLTALHAAVNADRLDIAEALLRAGANASAKDRYGLTPIYLASLNG
                     SVPLIQRLLEAGADPNAVDPGGETALMTATRTGAVGAMRLLIDRGAQVDAREPEFQQT
                     ALMIAARENHAPAVELLIKAGASINAQTRKGPTPNFVPPCKGTGCGSEGVGINRGGLP
                     DRGRRAEVKGGMTPLLYAARDGHVESARLLVAAGADLELGDGNAIRPLLMAALNGQIE
                     VARLLIERGANVNADDFWGRTPLWAAVEYRNLDMNNNDQDSPTDNGVDRAPFLPLIRL
                     LIDKGANVNARTRELPPPRRWLYSLNDVSWVDFTGQTPFLRAALSADTTTMKLLVERG
                     ADPNLPTLAGTTPLMAAAGVNWVVAQTYTESLQARYDAVALCLELGADVNAANSMGLT
                     ALLGAVNRGSNDIIELLVKRGARVDVKDKEGRTAL"
     gene            complement(1494..>2042)
                     /locus_tag="VFN38_02510"
     CDS             complement(1494..>2042)
                     /locus_tag="VFN38_02510"
                     /inference="COORDINATES: protein motif:HMM:NF016296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LytTR family DNA-binding domain-containing
                     protein"
                     /protein_id="HET9010652.1"
                     /translation="FEVLDLVGKDVAVVFTTAYDQYALRAFEVHAVDYLLKPISAERL
                     SEALVRVRERLGRGERSASPAALAAAKPLEGKAHRVLVRDGPRVHVIPVDKIDYVQAQ
                     DDYVCFRSEGKDYLKEQTLAETEETLDPAVFVRIHRSYLLNLSRLARVDQDERENRVA
                     VLSDGRRLPVSRAGYTRLSSLL"
BASE COUNT          273 a          731 c          718 g          320 t
ORIGIN      
        1 cagcgcggtg cgcccttcct tgtccttcac gtccacccgg gcaccccgct tcacgagcag
       61 ctcgatgatg tcgttggacc cgcggttcac ggccccgagc agcgcggtga gccccatcga
      121 gttggcggcg ttcacatcgg cgccgagctc caggcacagc gccaccgcgt cgtagcgcgc
      181 ctgcagcgac tcggtatagg tctgcgccac cacccagttc acgcccgcgg ccgccatgag
      241 cggcgtggtg ccggccagcg tcggcaggtt cggatccgcg ccgcgctcca cgagcagctt
      301 catcgtggtg gtgtcagcgg agagcgccgc ccgcaggaac ggcgtctgcc cggtgaagtc
      361 cacccatgac acgtcgttga gcgagtagag ccagcgccga ggcggcggca gctcgcgcgt
      421 gcgcgcgttg acgttggcgc ccttgtcgat gagcagccgg atgagcggca ggaacggcgc
      481 gcggtccacg ccgttgtcgg tcggcgagtc ctgatcgttg ttgttcatgt ccaggttgcg
      541 gtactcgacc gcggcccaga gcggggtccg gccccagaag tcgtcggcgt tgacgttggc
      601 gccgcgttcg atcagcagcc gcgccacctc gatctggccg ttgagcgccg ccatcagcag
      661 cgggcggatg gcgttgccgt cgccgagctc gaggtcggcg ccggcggcca ccagcagccg
      721 cgccgattcc acgtgcccgt cgcgcgcggc gtagagcagc ggcgtcatgc cgcctttcac
      781 ctcggcgcgc cggccgcggt ccggcaagcc gccgcggttg atcccgacac cttcggagcc
      841 gcagccggtg cccttgcagg gcggcacgaa attcggggtc gggcccttgc gcgtctgcgc
      901 gttgatcgac gccccagcct tgatcagcag ctccacggcg ggcgcatggt tctcgcgcgc
      961 cgcgatcatc agcgctgtct gctggaactc gggctcgcgc gcgtccacct gcgcgccgcg
     1021 atcgatcagc agccgcatgg cgcccaccgc gccggtgcgc gtggcggtca tgagcgccgt
     1081 ttcgccgccg ggatcgacgg cgttcggatc ggcgcccgcc tcgagcagcc gctgaatcag
     1141 tggcacgctg ccgttgaggc tcgcgaggta gataggggtg aggccgtagc gatccttggc
     1201 cgacgcgttc gcgccggcgc gcagcagcgc ctccgcgatg tcgagacggt cggcgttgac
     1261 ggcggcgtgg agcgcggtca gcccgtcctc acgcgccgcg ttcacgtccg ccttctgcgt
     1321 cagcagcgtc cgcaccgccg acaggtcgcc gcggtccgcg gcgtccacga gcggcacttt
     1381 gccggcagcc gcggccgtgg tggcctgcaa cagggccgcg gccacgacgg cggcggcgag
     1441 ggctcgcgca aacatgcgcg aattttatcg tagagggcgg ccttcaggcc gccctacagc
     1501 aacgaactga ggcgtgtgta gccggcgcgg ctgaccggca gccggcggcc gtcggacagc
     1561 acggcgacgc ggttttcccg ctcgtcctgg tccacgcgcg ccaggcgcga caggttcagc
     1621 aggtacgacc ggtggatacg gacgaacacg gccgggtcga gggtttcctc ggtctcggcc
     1681 agcgtctgct ccttcaggta gtccttcccc tcggaccgga agcacacgta gtcgtcctgc
     1741 gcctgcacgt agtcgatctt gtcgacgggg atcacgtgga cgcgcggccc gtcgcgcacc
     1801 agcacgcgat gcgctttccc ttccagcggt ttggcggccg cgagcgccgc aggtgacgcc
     1861 gaccgttcgc cgcgtcccag gcgctctcgc acgcggacga gcgcttcgct gagacgctcg
     1921 gcgctgatcg gcttgagcag gtagtccacc gcgtgcacct cgaacgcccg cagcgcgtac
     1981 tggtcgtagg cggtcgtgaa caccaccgcc acgtccttgc ccacgaggtc gagcacttcg
     2041 aa
//
LOCUS       DASSYW010000159         2933 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1388102, whole genome shotgun sequence.
ACCESSION   DASSYW010000159 DASSYW010000000
VERSION     DASSYW010000159.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2933)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2933)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2933
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1388102"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..414)
                     /gene="yihA"
                     /locus_tag="VFN38_02515"
     CDS             complement(<1..414)
                     /gene="yihA"
                     /locus_tag="VFN38_02515"
                     /inference="COORDINATES: protein motif:HMM:TIGR03598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTP-binding protein
                     YihA/YsxC"
                     /protein_id="HET9010653.1"
                     /translation="MSPDAARGASQDPLVIRSLEFIGPMATAEGWRPTNELPEVAFAG
                     RSNVGKSSLLNRLVRRKAFARVSNTPGRTREINFFKVNGTFVLADLPGYGYAKISKTR
                     KAEWLPLIEGYLRASPALRGVVQLLDVRHAPSEEDL"
     gene            complement(411..2840)
                     /gene="lon"
                     /locus_tag="VFN38_02520"
     CDS             complement(411..2840)
                     /gene="lon"
                     /locus_tag="VFN38_02520"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: protein motif:HMM:TIGR00763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HET9010654.1"
                     /translation="MPLFPRDGAEALEAPDRLPVLPLRDLVVFPHVVIPLLVGRQASL
                     AALDAAQTDGQLIFLVAQKNGDVEEPGANDLFRVGVIARIHHMQRSPNGTTKVLLEGL
                     ARARVTRFATTGGMLRATLAPLPLVLDAPADADAQSIEVIRRRALTLFEEYVGLNRRL
                     PDEIVHLVQATTPPERQAWGIAAHLGVRHEQRQTLLEAETEPSLWGHIAALLDGEIEL
                     LRLERKIDDDVRGSLFQNQREFYLQEQLKAIHRELGGEDGDDTDELAAALEAKGLPAP
                     VLARAQRELRRLRRLSAMSPESGVARTYLDWIAALPWKERTDDVLDVAHARQVLDEDH
                     YGLDDVKERVLDYIGVLSLVERLDGPILCLVGPPGVGKTSLGRSIARAMGRKFVRMSL
                     GGVRDEAEIRGHRRTYIGAMPGRVIQAMRRAEVVNPVILLDEIDKLGNDYRGDPSAAL
                     LEVLDPEQNRAFNDHYLEADYDLSQVLFITTANSLATIPEPLRDRMEIIRLAGYLDQE
                     KYAIARQFLLPRQLTQHGIDPTSVTVDADVIPAIVHGYTREAGVRDLERRLGRLARKL
                     ARARAERRATIASDAEAPAMKDHVSSEQLHAMLGVAPFDPSANVIEDKVGVATGLAYT
                     SVGGDVLEIEVSVVPGRGRLQLTGTLGDVMKESATAALSYTRARATALGLEREFLRAR
                     DIHVHIPAGATPKDGPSAGIAIACAIVSALTGIPLRGDVAMTGEITLRGRVLAIGGLK
                     EKTVAALRNRVAHVILPQENARDLDELPAEVKAGIRFHPVRSMDEVLAVALSRAVTAR
                     ADDETPTMVAH"
BASE COUNT          409 a         1050 c         1040 g          434 t
ORIGIN      
        1 gagatcctcc tccgacggcg cgtggcgcac gtcgaggagc tgcaccacgc cgcgcagggc
       61 gggcgacgcg cgcagatacc cctcgatcag cggcagccac tccgccttgc gcgtcttgga
      121 gatcttcgcg tagccgtagc ccgggaggtc ggcgagcacg aaggtgccgt tgaccttgaa
      181 gaagttgatc tcgcgcgtgc ggccgggcgt gttgctcacc cgggcgaacg ccttccggcg
      241 gacgagccgg ttgaggagcg acgacttgcc gacgttcgac cggccggcga acgccacctc
      301 cggcagctcg ttcgtgggac gccacccttc ggccgtcgcc atcgggccga tgaactccag
      361 cgacctgatg acgagcggat cctggctcgc tccgcgcgca gcgtccggac tcaatgggcg
      421 accatcgtcg gggtctcgtc gtccgcgcgc gccgtcacgg cccgcgacag cgcgaccgcc
      481 agcacctcgt ccatcgaccg caccgggtgg aaccggatcc ccgccttcac ctcggccggg
      541 agctcgtcga gatcgcgcgc attctcctgc ggcaggatca catgcgctac gcggttgcgc
      601 agcgccgcta ccgtcttctc cttgagcccg ccaatcgcga gcacgcgtcc gcgcagcgtg
      661 atctcccccg tcatcgcgac gtcgccgcgc agcgggatgc cggtgagcgc gctcacgatc
      721 gcgcaggcga tggcgatgcc ggcgctcggc ccgtccttgg gcgtggcgcc ggcggggatg
      781 tgcacgtgga tgtcgcgtgc gcgcaggaac tcgcgctcca ggcccagcgc ggtcgcgcgc
      841 gcgcgggtgt agctcaacgc ggccgtcgcc gactccttca tcacgtcgcc gagcgtgcca
      901 gtgagctgca gtcgcccgcg acccggcacg acgctcacct cgatctccag cacgtcgccg
      961 cccacgctcg tgtacgcgag ccccgtggcg acgcccacct tgtcctcgat cacgttcgcc
     1021 gatggatcga agggcgccac gccgagcatc gcgtgcagct gctcggacga cacatgatcc
     1081 ttcatcgccg gcgcctcggc gtccgacgcg atggtcgccc gccgctcggc ccgcgcccgc
     1141 gcgagcttgc gcgccaggcg gccgagtcgg cgctcgagat cacgcactcc ggcctcgcgc
     1201 gtgtacccgt gcacgatcgc cgggatcacg tcggcatcga ccgtcacgct tgtggggtcg
     1261 atgccgtgct gcgtgagctg gcgcggcagg aggaactgcc gcgcgatcgc gtacttctcc
     1321 tggtcgagat agccggccag gcggatgatc tccatccggt cgcgcagcgg ctccgggatc
     1381 gtcgccagcg agttcgccgt cgtgatgaac aacacctgcg agaggtcgta gtccgcctcg
     1441 aggtagtgat cgttgaacgc ccggttctgc tcggggtcca gcacctcgag cagcgccgcc
     1501 gacgggtcgc cgcggtagtc gttccccagc ttgtcgatct cgtcgaggag gatcaccggg
     1561 ttcacgacct ccgcgcgccg catcgcctgg atcacgcgcc ccggcatcgc gccgatgtag
     1621 gtgcggcggt ggccgcggat ctcggcctcg tcgcgcacgc cgcccagcga catgcgcacg
     1681 aacttccgcc ccatcgcccg ggcgatcgag cggccgagcg aggtcttgcc cactccgggc
     1741 gggccgacga gacagaggat gggtccgtcg agccgctcga cgagcgagag cacgccgatg
     1801 tagtccagca cccgctcctt cacgtcgtcc agcccgtagt ggtcctcgtc cagcacctgt
     1861 cgggcgtggg cgacgtcgag cacatcgtcg gtgcgctcct tccagggcag tgcggcgatc
     1921 cagtcgaggt aggtgcgggc cacccccgac tccggtgaca tggccgagag ccggcggagc
     1981 cggcgcagct cgcgctgcgc gcgcgccagc accggtgccg ggagaccctt ggcctccagc
     2041 gccgccgcca gctcgtcggt gtcgtcgccg tcctcccccc ccagctcgcg atggatcgcc
     2101 ttgagctgct cctgcaggta gaactcgcgc tggttctgga acagcgagcc gcgcacgtcg
     2161 tcgtcgatct tgcgttcgag gcgcagcagt tcgatctcgc cgtcgaggag cgccgcgatg
     2221 tgcccccaga gcgacggctc ggtctcggct tcgaggagtg tctggcgctg ctcgtggcgg
     2281 acgccgaggt gcgcggcgat gccccacgcc tggcgctcgg gcggcgtcgt cgcctgcacg
     2341 agatggacga tctcgtcggg gaggcgacga ttgagcccga cgtactcctc gaacagcgtc
     2401 agcgcgcgac ggcggatgac ctcgatggac tgcgcatcgg cgtccgcggg cgcgtcgagg
     2461 acgagcggca acggcgcgag cgtcgcgcgc agcatgccgc ccgtggtggc gaagcgggtg
     2521 acgcgggcgc gcgcgagccc ctcgagcagc accttcgtgg tgccgttcgg cgagcgctgc
     2581 atgtgatgga tgcgcgcgat gacgccgacg cgaaacaggt cgttcgcccc cggctcctcg
     2641 acgtcgccat tcttctgggc cacgaggaag atgagctgcc catcggtctg ggcggcgtcg
     2701 agcgcggcga gcgacgcctg gcggccgacg agcagcggga tcacgacgtg gggaaagacc
     2761 accaggtcgc gcaggggaag gaccggcagc cgatccggcg cctcgagcgc ctcggcgccg
     2821 tcgcggggga agagaggcat gcggggcaat ctaatgccgg ccggctgggc ctgcccgcag
     2881 gcggggactc gggacagggc actcgggact ggggactcgg gactcgaaag gcc
//
LOCUS       DASSYW010000160         3103 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1590768, whole genome shotgun sequence.
ACCESSION   DASSYW010000160 DASSYW010000000
VERSION     DASSYW010000160.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3103)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3103)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3103
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1590768"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1077
                     /locus_tag="VFN38_02525"
     CDS             <1..1077
                     /locus_tag="VFN38_02525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010655.1"
                     /translation="GAQGVSDGELRLAPQFLQYRLAEPANATISQFAIPLFVSFPAGE
                     RLTFDIGSAYARSRVATASGASEISGLTDTQLRGNLALGGDFVVLTAGVNLPTGTSAV
                     ALDQLPAAGLIGNDFLGFPISSMGTGLALTGGVAVARPVGAWNVGFGGAVRRATAYEP
                     FELPGQTLRYQPGNEYRARVGADRTAGPGRVALGLTYSAFGKDDVDGSVYNTGARVIA
                     QGGYSAVAGGREMTVAAYNVFRAPGSRASGEPTGRENIANLSASVGFTALGTLVEPSV
                     ELRHWHQNVPAFTSGSTSTPARSQSSVLGTAGLRTRVTLAGVRLFPSAGYTVGSLPTS
                     DAAGMPARARMTGFRAQLAMRVGQ"
     gene            1189..1938
                     /locus_tag="VFN38_02530"
     CDS             1189..1938
                     /locus_tag="VFN38_02530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HET9010656.1"
                     /translation="MAGHSKWKNIKHYKAATDAKRGVLFTKLIREIMMAAKLGGGDPS
                     ANARLRLAIDAGRAKSLPKENIERAIKKGTGELAGDAIQEVTYEGYGPGGVALIIDAM
                     TDNPTRTVADVRHKMSRAGGNLGTPGSVSFMFEKKGQITIDAVQHPDEDALLELALEA
                     GAEDFRREDDVYVVTTDPASFHAVQASLEAHKIVPTESELAMVPRTTVPVSGKENVES
                     LFKLIEALEELDDVQKVWANFDIDDAELADL"
     gene            1960..2529
                     /gene="ruvC"
                     /locus_tag="VFN38_02535"
     CDS             1960..2529
                     /gene="ruvC"
                     /locus_tag="VFN38_02535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008821 - crossover junction DNA
                     endonuclease activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HET9010657.1"
                     /translation="MLVLGIDPGTANTGYGVVRGGGSGFPSLVECGVIRTRARDPLPA
                     RLLEIHEGIAELIARHKPDALSVEDVFYARNVRTTVVLGHARGVILLAAAQAGLVVNE
                     YAPAEIKKAVVGTGGATKEQVQFMLTRLLRLKSVPQPSDAADGVAAALACLMGASLPR
                     IGGEGRVREPSRPAAAAARLTPPPSTRRP"
     gene            2526..>3103
                     /gene="ruvA"
                     /locus_tag="VFN38_02540"
     CDS             2526..>3103
                     /gene="ruvA"
                     /locus_tag="VFN38_02540"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00084.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009379 - Holliday junction helicase
                     complex [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HET9010658.1"
                     /translation="MIVQVAGQLVTKELDRVEILTEGGVAYELAVPLNAYEALPKAGE
                     RCMLHTYLVVKEDGWQLFGFTTVYERRVFQKVLGAKGVGPALALGLLSSLTADRLVRA
                     IREKDVATLQSVPRVGRKKAEQLILDLADKLDQLQTTGAAAGGGRSAAPGTDDAIRAL
                     VSLGYSTADAEKAVRSALDHGAQGMSAPELIRA"
BASE COUNT          468 a         1086 c         1137 g          412 t
ORIGIN      
        1 ggcgcgcagg gcgtgtccga cggcgagctg cggctcgcgc cgcagttcct gcagtaccgg
       61 ctcgccgagc cggccaacgc caccatctcg cagttcgcca tcccgctgtt cgtctccttc
      121 cccgcgggcg agcggctcac cttcgacatc ggctcggcgt acgcgaggtc gcgggtggcg
      181 acggcctcgg gtgcgagcga gatcagcggc ctcaccgaca cccagctgcg gggcaacctg
      241 gccctcggcg gcgacttcgt cgtgctcacg gcgggagtga acctccccac gggcacgtcg
      301 gccgtcgccc tggaccagct cccggcggcg gggctcatcg gcaacgactt cctcggcttc
      361 cccatctcga gcatgggcac cggactcgcg ctcacggggg gagtggccgt cgcgcgtccc
      421 gtgggcgcgt ggaacgtggg cttcggcggc gcggtgcggc gcgccaccgc gtatgagccg
      481 ttcgagctgc cgggccagac gctgcgctac cagcctggga acgagtatcg ggcccgcgtc
      541 ggtgcggacc gcacggccgg acccggtcgc gtggcgctcg ggctcaccta ctcggcgttc
      601 ggcaaggacg acgtggacgg ctcggtgtac aacaccggtg cgcgggtgat cgcgcagggc
      661 ggctactccg ccgtcgccgg cggccgagag atgaccgtcg cggcgtacaa cgtcttccgg
      721 gcgccgggca gccgggcgtc gggagagccg acgggacgcg agaacatcgc caacctctcc
      781 gcgtccgtcg ggttcacggc gctgggcacc ctcgtggagc cgagcgtgga gctgcgccac
      841 tggcaccaga acgtccccgc gttcacctcg ggcagcacgt ccacgcccgc ccggtcgcaa
      901 tcgagcgtgc tgggcacggc gggactgcgc acgcgcgtga cgctcgccgg agtgcggctc
      961 ttcccgagcg cgggctacac cgtgggctcg ttgccgacga gcgacgccgc gggcatgccg
     1021 gcccgcgcgc ggatgaccgg cttccgggcc cagctcgcga tgcgggtggg gcagtaggcg
     1081 tcgcgacgcc acgcggccgg cgctccgggt ggggcgggac cgcgatatta tattggttga
     1141 cagcccgctc cacgacgacg atcgaccctc ccagcgacga gcttccgcat ggccggccac
     1201 agtaaatgga agaacatcaa gcactacaag gcggcgaccg acgccaagcg tggtgtgctc
     1261 ttcacgaagc tgatccgcga gatcatgatg gcggcgaagc tcggcggcgg cgatccgtcg
     1321 gccaacgcgc ggctgcggct ggcgatcgac gcgggccgcg ccaagtcgct gccgaaggag
     1381 aacatcgagc gcgcgatcaa gaagggcacc ggtgagctcg cgggcgacgc gatccaggaa
     1441 gtgacgtacg agggctacgg gccgggcggg gtggcgctga tcatcgacgc gatgaccgac
     1501 aacccgacgc ggacggtggc cgacgtgcgg cacaagatgt cgcgcgcggg gggcaacctc
     1561 ggcacgccgg gctcggtgtc gttcatgttc gagaagaagg ggcagatcac gatcgacgcc
     1621 gtccagcatc ccgacgagga cgcgctgctc gagctggcgc tcgaggcggg cgccgaggat
     1681 ttccggcgcg aggacgacgt gtacgtggtg acgaccgacc cggcgagctt ccacgccgtg
     1741 caggcgtcgc tggaggcaca caagatcgtc cccacggagt ccgagctggc gatggtgccc
     1801 cggacgaccg tgccggtatc gggcaaggag aacgtcgagt cgctgttcaa gctgatcgaa
     1861 gcgctcgagg agctggacga cgtgcagaag gtctgggcga acttcgacat cgacgacgcc
     1921 gagctggcgg acctctagac cctcacgcag gcggcgcacg tgctcgtact cggcatcgac
     1981 ccgggcacgg cgaacaccgg gtacggcgtc gtgcgcggcg gcggctccgg cttcccttcc
     2041 ctcgtggagt gcggcgtgat ccgcacccgg gcgcgcgatc ccctgccggc gcgcctgctc
     2101 gagattcacg aaggcatcgc cgagctcatc gcgcggcaca agcccgacgc gctctcggtg
     2161 gaagacgtgt tctacgcgcg caacgtgcgc accaccgtgg tgctcggcca tgcgcgcggc
     2221 gtcatcctgc tcgccgccgc gcaggccggc ctcgtcgtca acgagtacgc ccccgccgag
     2281 atcaagaagg cggtggtcgg cacgggaggc gccaccaagg agcaggtgca gttcatgctc
     2341 acccggctgc tgcgcctcaa gagcgtgccg cagccctccg acgccgccga cggcgtggcc
     2401 gccgccctgg cctgcctgat gggagccagc ctgccccgca tcggcggcga aggtcgggtg
     2461 cgcgagccct cgcgtcccgc cgccgccgct gcccgactca ccccaccgcc cagcacgcgc
     2521 cgcccatgat cgtccaggtt gccggacagc tcgtcaccaa ggagctcgac cgcgtggaga
     2581 tcctcaccga gggaggggtc gcgtacgagc tcgccgtccc gctcaacgcc tacgaggcgc
     2641 tcccgaaggc gggcgaacgg tgcatgctgc acacctacct ggtggtgaag gaggacggct
     2701 ggcagctgtt cggcttcacg acggtgtacg agcgccgcgt cttccagaag gtgctcgggg
     2761 cgaagggggt gggaccggcg ctggcgctcg ggctgctatc gagcctcacc gccgatcgcc
     2821 tggtgcgggc gatccgcgag aaggacgtgg ccaccctaca gtcggtgccg cgggtgggcc
     2881 gcaagaaggc ggagcagctc atcctcgacc tcgccgacaa gctcgaccag cttcagacca
     2941 ccggcgcggc ggcgggcggc gggcgttcgg ccgcgcccgg aaccgacgac gccatccgcg
     3001 cgctggtgtc gctcgggtat tccacggcgg acgccgagaa ggcggtgcgg agcgcgctcg
     3061 atcatggggc gcaggggatg agcgcccccg agctgatccg ggc
//
LOCUS       DASSYW010000161         2141 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_227298, whole genome shotgun sequence.
ACCESSION   DASSYW010000161 DASSYW010000000
VERSION     DASSYW010000161.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2141)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2141)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2141
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_227298"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..364)
                     /locus_tag="VFN38_02545"
     CDS             complement(<1..364)
                     /locus_tag="VFN38_02545"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HET9010659.1"
                     /translation="MKRLVLVTDAWRPQTNGVVNTLVRLVAHLESKGTEVLVVAPDAH
                     RTFRLPSYPEIRVAWDPWRAIPRIRAFKPDAVHVATEGPLGFWTIGWLRRQGLRFTTS
                     FHTRYAEYLSARFPVPLEW"
     gene            582..1796
                     /locus_tag="VFN38_02550"
     CDS             582..1796
                     /locus_tag="VFN38_02550"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ceramide glucosyltransferase"
                     /protein_id="HET9010660.1"
                     /translation="MATPSHIVVLALTASALLGMVIGWGQVAALWKHLRGPRPVPTAR
                     PGISILKPLCGLDDRLAGNLLAFADLPYPDYEVLLGVRSQRDPAYPLAWMAARRWPQR
                     FRAVVQEGEAGLNPKVNQLVTMARHARHDILVISDSNTRVGRDYLDEIAAHLADPTVG
                     LVTHPLAGDGERDAGARLGAVADNLHLTGAITPAIVTAKLVCRKDYVVGKSMAMRRAD
                     VDALGGFASVKDVLAEDFVLGRAVVDRLGKRVVLGRSVVTCVSIRRALDGFVRRYARW
                     NVMQRQCAGLAAYVGLLLENPVLLAAGAALIEPSTATLALAAASVASRMATDGLAGRL
                     LRGRRFSLRALLVGGVKDLLCGAAWAYGLVSHSIEWRSNRLVVLSGSRLRVAHKHGGW
                     VKARLARAVTVR"
     gene            complement(1713..2120)
                     /locus_tag="VFN38_02555"
     CDS             complement(1713..2120)
                     /locus_tag="VFN38_02555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010661.1"
                     /translation="MERLSSWLGFVFTAELPRGRDLLARVRGRCDLVLHGHRHVPRGA
                     RLFGPPRPTHVFNAGSSTELARVRVFAHNGAGHLLGGPLWLDVPAPWEDAVRAFANEE
                     PAAVTQLPHRDGAREPGFDPSAVLVGHPQSAAG"
BASE COUNT          311 a          780 c          730 g          320 t
ORIGIN      
        1 cccactcgag cgggaccgga aaccgggcgc tcagatactc cgcgtaacgc gtatgaaagc
       61 tggtcgtgaa ccgcagtcct tgccggcgca accaaccgat cgtccagaac cccagcggtc
      121 cttccgtcgc aacgtgaacc gcgtcaggct tgaacgcgcg aattcgcggg atggcgcgcc
      181 agggatccca ggccacgcgg atctccgggt aggaaggcag ccggaatgtt cggtgtgcgt
      241 cgggcgcgac gaccaggacc tctgtccctt tcgactccaa atgcgcgacc agccggacca
      301 gcgtattgac aacaccgtta gtctggggcc gccaagcatc ggtaacgagc accagccgtt
      361 tcattgtcgt gtcctcccaa cggcgttgtt gccgtcgttg ggcctcgatg ttcgctggcg
      421 tccgtcacaa ccggatcaca accgcgcaag catcgcgtct catttgcgtg atagatcgaa
      481 ttgagccggc cggctccgcc gtcacgcttt gccacccagg cgtcaccgcg ccgtcgcgcg
      541 gccgcgatgg aaccgacacc ggccgcccgt accctggccg catggcaacg ccgtcgcata
      601 tcgtggtgct cgcgctcacc gcctctgcgc tgctcgggat ggtcatcggc tggggccagg
      661 tggccgcgct gtggaagcac ctgcgcggac cgcgccccgt cccgaccgca cggcccggga
      721 tctcgatcct gaagccgctc tgcggcctcg acgaccggct ggcggggaat ctactcgcct
      781 tcgccgatct gccgtacccc gattacgagg tgctgctggg cgtccgcagt cagcgggatc
      841 ccgcttaccc gctggcgtgg atggcggcgc gccgctggcc gcagcggttt cgcgcggtgg
      901 tgcaggaggg cgaggctggg ctgaacccca aggtgaacca gctggtgacg atggcgcgcc
      961 acgcccgcca cgacatcctg gtgatcagcg actccaacac gcgcgtcggc cgcgactacc
     1021 tggacgagat cgccgcccac ctcgccgacc cgacggtcgg tctggtcacg catcccctcg
     1081 ccggcgacgg cgagcgcgac gcaggcgcgc ggctgggcgc cgtcgcggac aacctgcacc
     1141 tcaccggcgc gatcacgccc gcgatcgtca cggccaagct cgtgtgccgg aaggactacg
     1201 tcgtggggaa gtcgatggcg atgcggcggg cggacgtcga cgccctgggc ggcttcgcgt
     1261 ccgtgaagga cgtgctggcg gaggacttcg tgctcgggcg cgcggtggtc gaccgcctgg
     1321 gcaaacgcgt ggtgctgggc cgctccgtcg tcacctgcgt ctcgatccgg cgcgcgctgg
     1381 acggcttcgt gcgccgctat gcgcgctgga acgtcatgca gcgccagtgc gccggcctcg
     1441 ccgcctacgt cgggttgctg ctggagaatc ccgtcctgct cgccgcgggc gcggcgctca
     1501 tcgagccgtc caccgcgacc ctcgcgctcg ccgcagcttc cgtcgccagc cggatggcca
     1561 cggacgggct ggcgggtcgc ctcctgcggg gacgacgctt ttcgctccgc gccctgctgg
     1621 tcggcggcgt gaaggacctg ctctgcggcg ccgcctgggc ctacggcctg gtcagccatt
     1681 cgatcgaatg gcgctcgaac cggctggtcg tgctatccgg cagccgactg cgggtggccc
     1741 acaagcacgg cggatgggtc aaagcccggc tcgcgcgcgc cgtcacggtg cggtagctgc
     1801 gtgaccgccg ccggctcttc gttcgcgaat gcccggaccg cgtcctccca cggcgccggg
     1861 acgtcgagcc acaacggtcc acccagcagg tgacccgcgc cgttgtgggc gaacacgcgc
     1921 acccgcgcca gctccgtcga cgagccggcg ttgaacacgt gcgtcggacg cggcggcccg
     1981 aacagacgcg caccgcgcgg cacgtggcga tgcccgtgca ggaccagatc gcagcgcccg
     2041 cgcacgcgcg ccagcagatc ccgcccgcgc ggcagctccg ccgtgaaaac gaaaccgagc
     2101 caggacgaca ggcgctccat cgcgtgctcc tcaggcatcg g
//
LOCUS       DASSYW010000162         4345 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_277072, whole genome shotgun sequence.
ACCESSION   DASSYW010000162 DASSYW010000000
VERSION     DASSYW010000162.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4345)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4345)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4345
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_277072"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(79..1371)
                     /gene="tyrS"
                     /locus_tag="VFN38_02560"
     CDS             complement(79..1371)
                     /gene="tyrS"
                     /locus_tag="VFN38_02560"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004831 - tyrosine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006437 - tyrosyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HET9010662.1"
                     /translation="MQTTDVLDELHWRGLVSQHTEGVPSLLASGPTSAYIGFDPTGSS
                     LHVGSLVQIMILVHLQRNGHRPVALVGGGTGMIGDPSGKTVERQLLTTDQVAANAAGI
                     HAQLERFLTFEGPAAARMRDNAAWLGGLALIDFLRDVGKHFTVNYMLQKDSVRSRMDA
                     GISFTEFSYMLLQAFDFLELRRRDGVSLQLGGSDQWGNITAGIELIRRVDGVEAHGLT
                     VPLVTTSAGTKFGKTEAGAVWLDAERTSPYAFYQFWLGVEDHDVGRYLRFFTLLSHAE
                     IEALDAATAAAPEKRAAQAALARDVTRRVHGEAALEAAEQVSTFFFGGLDPRELTDEA
                     FGILRVEAPYAEVEGAALASEGDEARVDAFKLLTASGLAASNGAAKRLLEQGGVSVNK
                     RKIGLAERHVARADVMLRGGHIVVGKGKRDYAVLKVRG"
     gene            1522..3897
                     /locus_tag="VFN38_02565"
     CDS             1522..3897
                     /locus_tag="VFN38_02565"
                     /inference="COORDINATES: protein motif:HMM:TIGR02074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PBP1A family penicillin-binding protein"
                     /protein_id="HET9010663.1"
                     /translation="MDLPFSRNFRRRHPKFSRFLGIALAFVVAFAVGLLYASWALVCR
                     AGACPSVDVLDEYQPRQTSKLFAADGRFIAELGLERRTLLKLDQIPPMVRSAFVLTED
                     KRFYEHKGVDFKRIPGALWADIKKRSFAEGFSTITMQLARNIFPERLSREKSLVRKLK
                     EAKVARAIEAKYSKEKILELYLNQIALGNQSFGVETASQRYFGKSARDLNVAEAAMLA
                     GLPKAPERYNPRRSPERAIQRRNTVIETMRDLGAISDADASLAKAYPLQLARRSEAGD
                     VAPYFVEWVRLQLEQQFGQRLYEQGLKVYTTLDVDLQSAAERALENQLKAIEAGRYGA
                     YKHVSFEAYMAKASSRAGEPAAGNSPYLQGAFIAMDPRTGAVRALVGGRDFDDSKFNR
                     AIQALRQPGSTFKPIVYADAVQNGRPPSYIVDDSPVSVPQVGGGDWTPQNYDGKFEGP
                     MPMRRGLYQSRNIVAIKVGMELGEQSVIDMARKFGITTPIPPYPSIHIGAADVYPIEM
                     VAAYSAFATLGTRASATSIVRVENAKGDVLWEPAPVRAPVMSPEESWLMVSMMKDVVQ
                     RGTAAGSVGSQFRIPAGGKTGTTNDGADVWFIGYTSDLVAGVWMGLDKPQKIKGNAQG
                     GVLAAPAWTAFMNEVYRRKPAPPDWPRPEGIVVRQIDPVSGMLAGPGCSGAVSEFFIL
                     GTDPTQPCIPTGYGPGIDTTYGYPSPAYTPMPRPTFPSDSGYPPSRPAVPSSDAIVIP
                     GATPIPRASRPGRTRDTSRTTFSRDSTRGLPRDTTRTPRDTANPFTLPPAR"
     gene            3894..>4345
                     /locus_tag="VFN38_02570"
     CDS             3894..>4345
                     /locus_tag="VFN38_02570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010664.1"
                     /translation="MTAWQPTDCHAHSRHSDGALTVAEVVARAAALGTRPSVTDHISR
                     DAPTIVNSPEGVERYLDDLESYAVLRGGEFCWHDALWRELPRTIVRRFTHRIGSLHSI
                     RLSSGHFFRAFSHQLPESVTALEYMEAHVASLEALAEEMPVDILAHPTL"
BASE COUNT          643 a         1620 c         1441 g          641 t
ORIGIN      
        1 ggggaagggt agcgacctcg cacggcggtc cagggtgcgc cgatgcatcc gcgagcgccc
       61 ggtcgccgcg ggtcgcggct agccgcgcac cttgagcacc gcgtagtccc gcttcccctt
      121 cccgacgacg atgtgcccac cgcgcagcat gacgtccgcg cgggccacgt gccgctccgc
      181 cagtccgatc ttccgcttgt tcaccgacac gccgccctgc tccagcagcc gcttcgctgc
      241 gccgttggac gccgcgagcc cggacgccgt gagcagcttg aaggcgtcca cgcgcgcctc
      301 gtcgccctcg ctggcgagcg ccgcgccctc cacctcggcg tacggcgcct ccacccgcag
      361 gatgccgaac gcctcgtccg tgagctcgcg cggatccagc ccgccgaaga agaaggtcga
      421 cacctgctcc gcggcctcga gcgccgcttc gccgtgcacg cgccgcgtga cgtcgcgcgc
      481 cagcgccgcc tgcgccgcgc gcttctcggg ggcggccgcc gtcgcggcgt ccagcgcctc
      541 gatctcggcg tgcgacagca gcgtgaagaa gcgcaggtac cggccgacgt cgtggtcctc
      601 gacgccgagc cagaactggt agaaggcgta cggcgatgtg cgctcggcgt cgagccagac
      661 ggctcccgcc tccgtcttgc cgaacttcgt ccccgcggag gtggtgacga gcgggacggt
      721 gagcccgtgc gcctcgaccc cgtccacgcg acgaatcagc tcgatgcccg ccgtgatgtt
      781 cccccactgg tcgctgccgc ccagctgcag cgacacgccg tcgcgtcggc gcagctccag
      841 gaagtcgaac gcctggagca gcatgtacga gaactcggtg aacgagatcc cggcgtccat
      901 ccgcgagcgc accgagtcct tctgcagcat gtagttgacc gtgaagtgct tcccgacgtc
      961 gcgcaggaag tcgatcaggg ccagcccgcc cagccaggcc gcgttgtcgc gcatgcgcgc
     1021 cgcggccgga ccctcgaacg tcaggaaccg ctcgagctgc gcgtggatcc ccgcggcgtt
     1081 cgccgccacc tggtcggtgg tgagcagctg ccgctcgacg gtctttccgc tcgggtcgcc
     1141 gatcatcccc gtgccgccgc ccacgagcgc caccggccgg tggccgttac gctggaggtg
     1201 cacgaggatc atgatctgga cgagactacc gacgtggagg ctgctgccgg tggggtcgaa
     1261 gccgatgtac gcggaggtcg gtccggaggc gagcagggac gggaccccct ctgtgtgctg
     1321 ggacaccaat ccacgccagt gaagctcgtc gagcacgtcg gtcgtctgca tggcacaaaa
     1381 ataggtccgc gggtgtcgaa ttgtcaggcg acgtgcgcgc ccgccgcgtt ggtgccagcc
     1441 gccgcacccc gttaaccttc ccttccagtg tcgttcggcg cggcgaccgc cacgtcggac
     1501 tcgggcctca gccgagagtc gatggacctc ccgttctccc ggaacttccg ccggcgtcac
     1561 cccaagttct cgcgctttct cgggatcgcc ctggcgttcg tcgtggcgtt cgccgtcggg
     1621 ctcctctacg cgagctgggc gctcgtctgc cgggccggcg cctgtccctc ggtggacgtc
     1681 ctcgacgagt accagccccg gcagacctcc aagctgttcg ccgccgacgg ccgcttcatc
     1741 gccgagctcg ggctcgagcg ccggacgctc ctgaagctcg accagatccc ccccatggtg
     1801 cgctcggcct tcgtcctcac cgaggacaag cgcttctacg agcacaaggg agtggacttc
     1861 aagcgcatcc ccggcgcgct gtgggccgac atcaagaagc gcagcttcgc cgaggggttc
     1921 tccaccatca cgatgcagct cgcgcggaac atcttccccg agcgcctctc ccgggagaag
     1981 tcgctcgtcc gcaagctgaa ggaggcgaag gtcgcgcgcg cgatcgaggc caagtactcc
     2041 aaggagaaga tcctcgagct ctatctcaac cagatcgcgc tcggcaacca gtcgttcggc
     2101 gtggagaccg catcgcagcg ctatttcggc aagtcggcgc gcgacctgaa cgtcgccgag
     2161 gcggcgatgc tggccggcct gcccaaggcc ccggagcggt acaacccccg ccgctcgccg
     2221 gagcgggcga tccagcggcg caacacggtc atcgagacga tgcgcgacct cggcgccatc
     2281 agcgacgccg acgccagcct cgccaaggca tacccgctgc agctcgcgcg ccggtccgag
     2341 gcgggggacg tggctcccta cttcgtcgag tgggtccgcc tccagctcga gcagcagttc
     2401 ggccagcggc tctacgagca ggggctcaag gtgtacacga cgctcgatgt ggacctccag
     2461 tcggccgcgg agcgcgcgct ggagaatcag ctgaaggcca tcgaggcggg gcgctacggc
     2521 gcgtacaagc acgtctcgtt cgaggcgtac atggccaagg cgtcgagccg cgccggggag
     2581 cccgcggcgg gcaactcgcc ctacctccag ggcgccttca tcgcgatgga tccgcgcacg
     2641 ggcgccgtcc gcgcgctcgt cggagggcgc gacttcgacg actcgaagtt caaccgcgcc
     2701 atccaggcgc tgcggcagcc gggctccacc ttcaagccca tcgtctacgc cgacgcggtc
     2761 cagaacggcc gtccgccgtc gtacatcgtc gacgattccc ccgtctccgt gccgcaggtg
     2821 ggcggcggcg actggacccc gcagaactac gacggaaagt tcgagggacc gatgccgatg
     2881 cgccgcggcc tctaccagtc gcgcaacatc gtggcgatca aggtcggcat ggagctcggc
     2941 gagcagagcg tcatcgacat ggcgcgcaag ttcggcatca cgacgcccat cccgccctat
     3001 ccgtccatcc acatcggcgc ggccgacgtc tatccgatcg agatggtcgc cgcgtactcg
     3061 gccttcgcca cgctcggcac gcgcgcgagc gcgacctcga tcgtgcgcgt cgagaacgcc
     3121 aagggggacg tgctgtggga gccggccccc gtgcgcgcgc cggtgatgtc ccccgaggag
     3181 tcgtggctga tggtcagcat gatgaaggac gtcgtgcagc gcggcaccgc ggcgggctcg
     3241 gtgggatcgc agttccgcat ccccgccggc ggcaagaccg gcacgacgaa cgacggtgcc
     3301 gacgtctggt tcatcggcta cacctccgac ctcgtcgccg gcgtgtggat ggggctcgac
     3361 aagccgcaga agatcaaggg caacgcgcag ggtggcgtgc tcgccgcgcc ggcgtggacc
     3421 gccttcatga acgaggtcta ccgccgcaag ccggcgcccc ccgactggcc gcggcccgag
     3481 gggatcgtcg ttcgccagat cgatccggtg tcggggatgc tcgccggtcc gggctgctcg
     3541 ggtgcggtgt cggagttctt catcctcggc accgatccca cgcaaccctg catcccgacc
     3601 ggctacggcc ccggcatcga cacgacctac ggctatccga gcccggcgta caccccgatg
     3661 ccgcgtccga cgttcccgtc ggacagcggc tatccgccgt cgcggcccgc ggtgcctagt
     3721 tcggatgcca tcgtgatccc gggcgccacg ccgatcccgc gcgcgtcgcg tccgggccgg
     3781 acgcgcgaca cgagccgcac caccttctcg cgcgactcca cgcgcggcct gccgcgcgac
     3841 acgacacgca cgccgcgcga cacggcgaat cccttcaccc ttccgcccgc ccgatgaccg
     3901 cgtggcagcc gaccgactgc cacgcgcact cgcgtcactc cgatggggcg ctcacggtgg
     3961 ccgaggtcgt ggcgcgggcc gcggcgctcg gcacgcggcc gagcgtcacc gaccacatct
     4021 cgcgcgacgc ccccaccatc gtgaactctc ccgagggcgt cgagcgctat ctcgacgacc
     4081 tcgagtcgta cgccgtgctg cgcggcgggg agttctgctg gcacgacgcg ctgtggcgtg
     4141 agctgccgcg cacgatcgta cggcggttca cccaccgcat cggctcgctg cactcgatcc
     4201 ggctctcgag cggccacttc ttccgcgcct tttcgcacca gctccccgag tcggtcacgg
     4261 ccctggaata catggaggcg cacgtcgcgt cgctcgaggc gctggccgag gagatgccgg
     4321 tggacatcct ggcgcatccc accct
//
LOCUS       DASSYW010000163         2692 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1382383, whole genome shotgun sequence.
ACCESSION   DASSYW010000163 DASSYW010000000
VERSION     DASSYW010000163.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2692)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2692)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2692
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1382383"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..867)
                     /locus_tag="VFN38_02575"
     CDS             complement(<1..867)
                     /locus_tag="VFN38_02575"
                     /inference="COORDINATES: protein motif:HMM:NF017215.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase N-terminal
                     domain-containing protein"
                     /protein_id="HET9010665.1"
                     /translation="MSEARGGWSVGVDVGGTFTDLAAVSTDGRVLTRKVLSTPGDQSD
                     GVLTALDALGAPGAAVERLVHGTTVVTNLLLERAGARVALCATEGATDLLELRRQERA
                     SLYDLAVHHPPALVPHEMVLAVPERMDPSGVVRPLDGAAARAVAERVAALAPDIGAIA
                     LLYAYADPAHERTLAAAIAERSPGLDVVLASDVLPEIREYERTATTVAEAYARPAVAR
                     YVGRLAERLRAGGYPPPGVMTSSGGMRSAAEAARGAAALALSGPAGGVVGAAAVARAV
                     DVAQALTIDIGGT"
     gene            complement(864..2531)
                     /gene="lnt"
                     /locus_tag="VFN38_02580"
     CDS             complement(864..2531)
                     /gene="lnt"
                     /locus_tag="VFN38_02580"
                     /inference="COORDINATES: protein motif:HMM:TIGR00546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006497 - protein lipidation [Evidence
                     IEA];
                     GO_process: GO:0042158 - lipoprotein biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HET9010666.1"
                     /translation="MSWLRALRPTRDDALAALISAALFAIAFPPFPFVLPAFVCLAPM
                     ALRVARLAEANGDRMVRDAARAGFWFGLLGYAANLYWIAVALSLFTKLAIAGYVAALL
                     WLAPFVALTMAALFLARRHTRWPMAILLPVVWTASEVVLNYLLDLAFPWLPLGLSMAR
                     HPMLAQLADLSGVRGVTFWIAATNGLLVDAWLLVRPTPPADLDEPRTQPAGGRAASRV
                     VAAAVLAALVAAYGQYRLRTTRLEPVARVAIVQPNIPEDEKLERANPDIFISRLAALT
                     RQAYDTADPQLMVWPETALPDYLDRHPEWQDSIQTLAAVERVPLVFGILDYRLRGTPP
                     SAASGLEPDYDYYNAAMRADGMGRIDRGSAYHKGYLVPIVERVPFLNPAWFGNLQYFG
                     GFGRGVNPEPFQFSFGKAGVLICYESIFPQLSRRYRRHGAKLLLNITNDAWFGHSTAP
                     YQHLAHMVFRAIENRVGVVRSANTGISGYIDPLGVVHGETELFVPAVRTYLAQTTSVT
                     TPYVAIGDWLGTLCLAVTVVLVGADFRRRRRERSAADARPPAPAPVG"
BASE COUNT          404 a          916 c         1061 g          311 t
ORIGIN      
        1 cgtgccgccg atgtcgatcg tcagcgcctg cgcgacatcc accgcgcgcg ccacggccgc
       61 cgcgccgacg acaccgccgg ccggccccga gagagcgagc gcggcggcgc cgcgcgccgc
      121 ctcggccgcc gagcgcatcc cgccgctcga ggtcatcacc ccgggcggcg gatagccgcc
      181 ggcgcgcagc cgctcggcca gccgccccac gtagcgcgcg acggcgggac gggcgtacgc
      241 ctcggcgacc gtggtggcgg tgcgctcgta ctcgcggatc tcgggcagga cgtcggaggc
      301 gaggacgacg tcgagcccgg gcgaacgctc ggcgatcgcg gcggcgagcg tccgctcgtg
      361 cgccggatcg gcgtacgcgt agaggagcgc gatcgccccg atatcgggag cgagcgccgc
      421 cacgcgctcg gcgacggcgc gggcggcggc cccgtcgagt gggcgtacga cgccggaggg
      481 gtccatgcgc tcgggcaccg ccagcaccat ctcgtgcggg acgagcgcgg gggggtgatg
      541 gacggcgagg tcgtagagcg acgcgcgctc ctgccgccgg agctcgagca ggtcggtggc
      601 gccctcggtg gcgcagagag cgacgcgcgc gcccgcgcgc tcgagcagca ggttggtgac
      661 caccgtcgtg ccgtgcacca gccgctcgac cgccgcccct ggagcgccga gcgcgtcgag
      721 ggcggtgagg acgccgtcgc tctgatcgcc gggcgtgctg agcaccttgc gcgtcagcac
      781 gcggccgtcg gtggagaccg cggcgagatc ggtgaaggtg ccgccgacgt cgacgccgac
      841 ggaccagccg ccgcgcgcct cgctcacccg accggggccg gcgccggggg acgcgcgtcg
      901 gccgcggagc gctcgcgccg ccggcgccgg aagtcggcgc ccacgagcac gacagtgacc
      961 gccaggcaga gcgtgcccag ccagtcgccg atcgcgacgt acggggtcgt caccgacgtg
     1021 gtctgcgcga gataggtgcg caccgcgggg acgaagagct ccgtctcgcc gtgcacgacg
     1081 ccgagcggat cgatgtaccc ggagatgccg gtgttcgccg agcgcacgac gcccacgcga
     1141 ttctcgatgg cgcggaagac catgtgcgcc agatgctggt agggcgcggt gctgtggccg
     1201 aaccaggcgt cgttggtgat gttgagcagc agcttcgcgc cgtggcgccg gtagcgccgc
     1261 gagagctggg ggaagatcga ctcgtagcag atcagcaccc cggccttccc gaaggagaac
     1321 tggaagggct ccggattcac gccacgcccg aaccccccga agtactggag gttgccgaac
     1381 caggccgggt tgaggaaggg cacgcgctcg acgatgggca cgaggtagcc cttgtggtac
     1441 gccgagccgc gatcgatgcg tcccatgcca tcggcgcgca tcgcggcgtt gtagtagtcg
     1501 tagtcgggct cgagtcccga ggccgcgctc ggcggcgtgc cgcgaagcct gtagtccagt
     1561 attccgaaga ccagcggcac acgctcgacc gcggcgagcg tctggatgga gtcctgccac
     1621 tccggatgcc ggtcgaggta gtcggggagc gccgtctccg gccagaccat gagctgcggg
     1681 tcggcggtgt cgtaggcctg gcgggtgagc gcggcgagac gggagatgaa gatgtcagga
     1741 ttcgcgcgct cgagcttctc gtcctcgggg atgttcggct ggacgatggc gacgcgggcg
     1801 accggctcga ggcgcgtcgt ccgcaggcgg tactggccgt aggccgccac gagggcggcg
     1861 agcaccgcgg cggcgacgac gcgcgatgcg gcgcgccctc cggccggctg cgtgcgcggc
     1921 tcgtcgaggt ccgccggcgg cgtggggcgc acgaggagcc aggcgtccac caggaggccg
     1981 ttcgtggcgg cgatccagaa ggtcacccca cgcacgccgc tcaggtccgc gagctgcgcc
     2041 agcatcgggt ggcgggccat cgagaggccg agcggaagcc aggggaaggc gagatcgagc
     2101 aggtagttga gcaccacctc cgaggcggtc cagacgacgg ggaggaggat cgccatcggc
     2161 cagcgcgtgt ggcgccgcgc gagaaagagc gcggccatcg tcagcgcgac gaagggggcc
     2221 agccagagca gcgcggcgac gtagccggcg atcgccagct tcgtgaacag cgagagcgcg
     2281 acggcgatcc agtagaggtt ggcggcgtag ccgagcagcc cgaaccagaa gccggcgcgg
     2341 gcggcgtcgc gcaccatgcg gtcgccgttc gcctcggcga gacgcgccac ccgcagcgcc
     2401 atcggcgcca ggcagacgaa ggccggcagg acgaagggaa agggggggaa ggcgatcgcg
     2461 aagagtgccg ccgagatgag cgcggcgagc gcgtcgtcgc gcgtcgggcg gagggcgcgc
     2521 agccagctca cgtccccctc ccgtcgcggc gcgcagggcc ggcggcggtc acaggcggat
     2581 ctctttcccc tcgtcggccg acttgtagat cgcctcgagc acccggtgca gcatgacctg
     2641 atcggtggga gcctcgtact tcgtctcccc cgagaggacg gcgatgaagt gc
//
LOCUS       DASSYW010000164         3631 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1343042, whole genome shotgun sequence.
ACCESSION   DASSYW010000164 DASSYW010000000
VERSION     DASSYW010000164.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3631)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3631)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3631
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1343042"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(232..3330)
                     /locus_tag="VFN38_02585"
     CDS             complement(232..3330)
                     /locus_tag="VFN38_02585"
                     /inference="COORDINATES: protein motif:HMM:TIGR04056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0071702 - organic substance transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SusC/RagA family TonB-linked outer membrane
                     protein"
                     /protein_id="HET9010667.1"
                     /translation="MAMVRSLTRAVALSLLLAAQAGAQGATGTITGRVVDSASRQPLS
                     AVSLRLVGTQRGAMTREDGSFTLPGVPSGAQRVRASRIGFGPQVRDVTVPAGGSASVE
                     FALPAQAAVLGEMVVTGYGAQRRESITGSVATVEADQANVGVITNANQMLQGRVAGLQ
                     MVTNNGEPGGGAQIRIRGGTSISASNDPLYVVDGIPLQNESTVAGGYGLEFNAALPRS
                     PLNTINPNDIESITVLKDASATAIYGSRGANGVILIQTRRGLSGKPSIDYDVYVAAAS
                     PSHKLDFLTGDQYRTFVQQQVTAGKLPATQLAALGTANTDWEDALTRTGYTTSHNLSF
                     AGGSGPTTYRASLNYFDQKGVVIANGLKRYQGRLNAQHQAFDGKLGLGLTLTASRVNN
                     NYLAMENGGGFSGGVFTNMAIFNPTQPVTLPTGAYYEIGAGAQGTRNPVALAEQITDI
                     APENRVLGNLSASLELISSLTAQTTLGVDYTDAVRDTYFPIISPIGAQYGGAARQAQR
                     SLQNLNFQQLLTFTPKLSRNQELDVVGGYEYSTFNNHGFEVISQGFVTDVFQFNNLGA
                     GTPANSPAPVSYIQESKLVSFFSRANYGYADKYFLTGVIRRDGSSRLAEGSKWSVFPA
                     LSASWRLSNEDFMKGRTPFSSLALRAGWGRQGNQAIQPYATQLLLKTDNGSKYPFGGT
                     VLTGLAAVQVANPDLKWETSEQTNVGLDWGIKSDRFTGIIDLYSKQTKDLLLRVPVPQ
                     PAVVSSRIENIGTVQNRGFEATVEGRLWDTQTKSLSSGLLFSVERSEVKDIGADRNFL
                     ITGGVFGQGQSGRFAQRLIPGQPLGIFFGPEFIGINAQGQQEFNKYTVTRDAQGRELT
                     RTLSGKTLSPVGDDEMIIGNANPSFSMGFHSNLTWNKFDASWNWRGEFGRDVFNNTAL
                     VYSTKGNAKQGRNFLATALSDPTGIDEPSIYSSRWIEDGSFVRLQNVTLGYTFTLPQL
                     SGRPTRVYISGDNLLLFTGYSGYDPEVFTDANVDGIGTRGIDYLTYPRARTITTGVRL
                     SF"
BASE COUNT          541 a         1130 c         1332 g          628 t
ORIGIN      
        1 tagaccgacg ccacgccggc gacgatctcg agatcggtct tgaacgcgtt gtcgggtgtc
       61 agcgcgtcct tcggaacctc ggtgaggttc gtgcacgcct ggatcagcgt gagcgcggga
      121 accagaagga gcgcgcccag cgtgacccgg cgaagcgact tcttcatgaa agtcgtcata
      181 tgctgtcgtt acctgtatga gaaggcagga ggccgtgtat gccgggtgcg gctagaacga
      241 gagccggacg cccgtggtga tcgtgcgggc gcgcgggtag gtcaggtagt cgatgccgcg
      301 ggtgccgatg ccgtccacgt tggcgtcggt gaacacctcg ggatcgtatc cggagtagcc
      361 ggtgaacagg agcaggttgt cgcccgagat gtacacgcgg gtgggccgtc cgctgagctg
      421 cggcagcgtg aaggtgtagc cgagcgtgac gttctggagg cgcacgaacg agccgtcctc
      481 gatccagcgc gacgagtaga tcgacggctc gtcgatgccc gtcgggtcac tcagggcggt
      541 cgcgaggaag ttgcggccct gcttggcgtt gcccttggtg gagtagacga gcgccgtgtt
      601 gttgaacacg tcgcggccga actcaccgcg ccagttccag ctcgcgtcga acttgttcca
      661 cgtcaggttg ctgtggaacc ccatgctgaa gctcgggttc gcgttgccga tgatcatttc
      721 gtcgtcgccc acgggcgaca gcgtcttgcc gctcagggtc cgcgtgagct ctcggccctg
      781 cgcgtcgcgg gtgacggtgt acttgttgaa ctcctgctgg ccctgcgcat tgatgccgat
      841 gaactcgggc ccgaagaaga tgccgagggg ctggccgggg atgagccgct gcgcgaagcg
      901 cccggactgt ccctggccga acacgccgcc ggtgatcagg aagttgcgat cggcgccgat
      961 gtccttcacc tcgctccgct ccacggagaa gagcaggccc gacgacagcg acttggtctg
     1021 ggtgtcccag agccgtccct cgaccgtggc ctcgaagccg cggttctgca cggtgccgat
     1081 gttctcgatg cgcgacgaca cgacggcggg ctgcggaacc ggcacgcgga gcagcaggtc
     1141 cttggtctgc ttgctgtaga ggtcgatgat gccggtgaag cggtcgctct tgatgcccca
     1201 gtcgagcccg acgttcgtct gctccgacgt ctcccacttg aggtccgggt tcgcgacctg
     1261 cacggcggcg aggccggtca ggacggtgcc gccgaacgga tacttggagc cgttgtccgt
     1321 cttgaggagc agctgcgtgg cgtagggctg gatcgcctgg ttgccctggc ggccccaccc
     1381 ggcgcgcagc gcgaggctcg agaagggggt gcgccccttc atgaagtcct cgttgctcag
     1441 gcgccacgag gcggacagcg cggggaagac cgaccacttg ctcccttccg ccaggcgcga
     1501 cgagccgtcg cggcggatca caccggtgag gaagtacttg tcggcgtagc cgtagttggc
     1561 gcgcgagaag aaggagacga gcttgctctc ctggatgtac gagaccggcg ccggcgagtt
     1621 ggcgggcgtg cccgcgccca ggttgttgaa ctggaacacg tcggtgacga agccctgcga
     1681 gatgacttcg aagccgtggt tgttgaaggt gctgtactcg tagccgccca ccacgtccag
     1741 ctcctggttg cgcgagagct tgggcgtgaa ggtcagcagc tgctggaagt tgaggttctg
     1801 caggctgcgc tgcgcctggc gcgccgcgcc accgtactgg gcgccgatgg ggctgatgat
     1861 cgggaagtag gtatcgcgca ccgcgtccgt gtagtccacg cccagcgtcg tctgcgcggt
     1921 gaggctcgag atcagctcca gcgacgcgga gaggttgccg aggacgcgat tctccggtgc
     1981 gatgtcggtg atctgctcgg cgagggcgac gggattgcgc gtcccctgcg cgccggcgcc
     2041 gatctcgtag taggcccccg tcggcagcgt caccggctgc gtcgggttga agatcgccat
     2101 gttggtgaag acgccgcccg agaagccgcc gccgttctcc atcgcgaggt agttgttgtt
     2161 cacccgcgac gccgtgagcg tgagcccgag cccgagcttg ccgtcgaagg cctggtgctg
     2221 cgcgttgagc cggccctggt accgcttgag gccattggcg atcaccacgc ccttctggtc
     2281 gaagtagttc agcgaggcgc ggtaggtggt gggtccggag ccgccggcga acgagaggtt
     2341 gtggctcgtc gtgtagccgg tgcgggtgag ggcgtcctcc cagtcggtgt tcgccgtgcc
     2401 gagcgccgcg agctgcgtgg cggggagctt gccggccgtc acctgctgct ggacgaaggt
     2461 gcggtactgg tcgccggtga ggaagtcgag cttgtgcgac gggctcgccg ccgcgacgta
     2521 cacgtcgtag tcgatgctcg gcttgccgct gaggccccgc cgcgtctgaa tcaggatgac
     2581 gccgttggcg ccgcggctgc cgtagatcgc cgtcgccgac gcatccttga gcacggtgat
     2641 cgactcgatg tcgttcgggt tgatcgtgtt gagcgggctg cgcgggaggg cggcgttgaa
     2701 ctcgagaccg tacccgccgg ccaccgtgct ctcgttctgg agcgggatgc cgtccacgac
     2761 gtagagcgga tcgttgctgg cgctgatcga cgtgccgccg cggatgcgga tctgcgcgcc
     2821 gccgcccggc tcaccgttgt tcgtcaccat ctggagcccg gccacgcgtc cctggagcat
     2881 ctggttcgcg ttcgtgatca cgccgacgtt cgcctggtcg gcctcgacgg tggccaccga
     2941 gccggtgatc gactcgcgcc gctgcgcgcc gtagccggtg acgaccatct cgcccagcac
     3001 ggccgcctgc gcgggcagcg cgaactcgac gctggccgag ccgcccgcgg gcacggtgac
     3061 gtcgcgcacc tgcggaccga agccgatgcg gctggcgcgg acgcgctgcg cacccgaggg
     3121 cacgccgggg agggtgaagg agccgtcctc gcgggtcatc gcaccgcgct gggtgcccac
     3181 gagccgcagg ctgacggccg agagcggctg tcgcgaggcg gaatcgacga cgcgccccgt
     3241 gatcgtgccg gtggcgcctt gggcgcccgc ctgcgcggcc aacagcaaac tgagtgcgac
     3301 tgcgcgagtg aggctgcgga ccatcgccat acgacaaccc tccagggggg acggagtgtg
     3361 tgatcgtgcc gcgcgccgtg gaggtcgcgt ggggtgatgc gggattgatt tcgagcgctt
     3421 ccccgacagc ccgccgaggt ggggccagac gatcgcgggg agctggggcg acattgacag
     3481 gtacgaagga cggctctcgc gcagcttaag agcgggagcg ggcggagcca gacttatagg
     3541 cgagcgctca tgctgtcaag aagcaccccc gcccgtggct tgacgtcaca tgcgccgaag
     3601 cggcaatctg gaccatgaac ctcctcgcca t
//
LOCUS       DASSYW010000165         2496 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_669790, whole genome shotgun sequence.
ACCESSION   DASSYW010000165 DASSYW010000000
VERSION     DASSYW010000165.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2496)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2496)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2496
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_669790"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2171)
                     /locus_tag="VFN38_02590"
     CDS             complement(<1..2171)
                     /locus_tag="VFN38_02590"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HET9010668.1"
                     /translation="MTRSISRRLMVGLTIAVGLSSALVVALLAAYETRTATTDLARDI
                     DGSVNAFARLIEPALWDVDLARSARLADAFARDPRIARLTLHERTTGTAQAIDRIHTS
                     DTALRTMEVRRGDQRLGTVSVAFNRGYYRDQVRRQVVNAAVVSLIALVATLIGLRLLL
                     RRLFRRPLEELSDVVRGYGTGSYPPFAAAVPYEEFADLGRVLDSMSAQIRDQLAALGT
                     ANRELAALNRFLVIATADVEPSQLVAEAARELQDLFDATQVRADVAGEHGVSETAYAY
                     ARSEGASAAPVAASAVPIVVDAHPVGAITLARDSGRPFTATELALASTVAAQVASAIS
                     RFRAHAAERLLRIAIEQLPDSVIITDRSRRIVYVNAGFTAMTGYSAAEAIGRDPRDLK
                     RPDGDPAAEAAMAALIDAGRGWVGRLTSHRKSGELYFEQLVVTPVRDERGEITNHVAI
                     GRDVTAELRRDEQLRHAQRMDAVGQLAGGVAHDFNNMLGAVLMQLELVELEEGLTPSL
                     HEAAQDMRAALDRAANLTRQLLMFSRRQAMRVAAHDLNRIVAEMLRILTRVLGERITI
                     EFVRARDPVIFEGDAGMLEQVIVNLCVNARDAMPSGGRLVISTGTVRMDEESEHPGAW
                     ALLEVRDTGTGMSPEVQERMFEPFFTTKEVGRGTGLGLATTHGIVAQHGGWISVDSVV
                     GEGTTVRVHLPAHDGAVADRDEGAERDVVHGNAAVLVVEDEP"
     gene            complement(2168..>2496)
                     /locus_tag="VFN38_02595"
     CDS             complement(2168..>2496)
                     /locus_tag="VFN38_02595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010669.1"
                     /translation="RRVVLEPAPTEETNLRKLAAGRIAAAVVNSDAVKSPEWVAARAG
                     VTGRVRSVFSIGGMPAYVGFSVAHRQGRALADKFDAGYARILASGERDRIQRRWITRG
                     APATRP"
BASE COUNT          334 a          946 c          865 g          351 t
ORIGIN      
        1 ggctcgtcct ccacgacgag cacggcggca ttcccgtgca ccacgtcccg ctccgcacct
       61 tcgtcgcgat ctgccaccgc gccgtcgtgc gcgggcagat gaacccggac cgtcgtcccc
      121 tcgcccacga cgctgtccac gctgatccag ccgccgtgct gcgccacgat gccgtgcgtc
      181 gtcgcgaggc cgagccccgt gccccgcccc acctccttcg tcgtgaagaa gggctcgaac
      241 atccgctcct gtacctccgg cgacatcccg gtcccggtgt cgcgcacctc gagcagggcc
      301 cacgcccccg gatgctcgga ctcttcgtcc atcctcacgg tcccggtgga gatgacgagc
      361 cgcccacccg agggcatggc gtcgcgcgcg ttgacgcaca ggttgacgat cacctgctcc
      421 agcattccgg cgtcgccctc gaagatgacg ggatcgcgcg cgcgcacgaa ctcgatcgtg
      481 atccgctccc ccagcacgcg cgtcaggatg cgcagcatct cggcgacgat gcgattgaga
      541 tcgtgcgccg ccacgcgcat cgcctggcgg cggctgaaca tcagcagctg ccgggtgagg
      601 ttcgccgcgc gatcgagtgc ggcgcgcatg tcctgcgcgg cctcgtgcag cgacggcgtg
      661 agcccctcct cgagctccac cagctcgagc tgcatcagca cggcgcccag catgttgttg
      721 aagtcgtgcg ccacgccgcc ggcgagctgg cccacggcat ccatgcgctg cgcgtggcgg
      781 agctgctcgt cgcggcgcag ctcggcggtg acgtcccggc cgatcgcgac gtggttcgtg
      841 atctcgccgc gctcgtcgcg gaccggcgtc accacgagct gctcgaagta cagctcgccc
      901 gacttgcggt ggctcgtgag ccggccgacc cagcccctgc cggcgtcgat cagcgcggcc
      961 atcgccgcct ccgccgcggg atcaccgtcc ggacgcttga ggtcgcgcgg gtcccgcccg
     1021 atcgcttcgg cggccgagta gcccgtcatc gcggtgaagc cggcgttcac gtagacgatg
     1081 cgccgcgagc ggtcggtgat gatcacgctg tcgggcagct gctcgatcgc gatgcgcagc
     1141 agccgctcgg cggcgtgggc gcggaagcgc gagatggccg acgccacctg cgcggccacg
     1201 gtgctcgcga gggccagctc cgtcgccgtg aacgggcggc cgctgtcgcg cgccagcgtg
     1261 atcgcgccga cggggtgtgc gtccaccacg atggggacgg cgctcgccgc gacgggcgct
     1321 gcgctcgcgc cctccgagcg cgcgtaggcg tatgccgtct cggacactcc gtgctctccc
     1381 gcgacgtcgg cgcggacctg cgtcgcgtcg aacaggtcct ggagctcgcg cgccgcctcc
     1441 gccacgagct gcgaaggctc gacgtcggcg gtggcgatga cgaggaagcg gttgagcgcc
     1501 gcgagctcgc ggttcgccgt gccgagcgcg gcgagctggt cgcggatctg ggcgctcatc
     1561 gagtcgagca cgcgcccgag gtcggcgaac tcctcgtagg ggaccgcggc cgcgaacggc
     1621 ggatagcttc ccgtcccgta ccctcgtacg acgtcggaca gctcctccaa cggacgccgg
     1681 aacaaccggc gcagcagcag gcgcagcccg atgagcgtgg ccacgagcgc gatcagcgac
     1741 acgaccgccg cgttcacgac ctggcggcgc acctggtcgc gatagtagcc acgattgaac
     1801 gccacgctca ccgtaccgag gcgctggtcg ccgcggcgca cctccatcgt ccgcagcgcc
     1861 gtgtcgctcg tgtggatgcg atcgatcgcc tgcgccgtcc cggtggtccg ctcgtgcagc
     1921 gtgagccgcg cgatccgcgg gtcgcgcgcg aacgcgtcgg cgaggcgcgc cgaccgcgcg
     1981 aggtccacgt cccagagcgc cggctcgatc aggcgggcga aggcgttcac cgatccgtcg
     2041 atgtcccggg cgaggtcggt cgtcgcggtg cgcgtctcgt acgcggcgag cagcgcgacg
     2101 accagcgcgg agctgagccc caccgcgatc gtcaaaccca ccatgagccg ccgcgagatg
     2161 gaccgcgtca tgggcgggtc gccggcgccc cgcgggtgat ccagcgccgc tggatgcgat
     2221 cgcgctcgcc actggcgagg atgcgcgcat atccggcgtc gaacttgtcc gcgagcgcgc
     2281 gcccctgccg gtgcgccacg ctgaatccga cgtacgcggg catgccgccg atgctgaaca
     2341 ccgagcgcac ccgtcccgtg acgccggcgc gtgccgcgac ccactcgggc gacttcaccg
     2401 cgtcgctgtt caccaccgcc gcggcgatcc gccccgcggc gagcttccgc aggttggtct
     2461 cctcggtcgg cgccggctcc agcacgacgc gacgac
//
LOCUS       DASSYW010000166         2254 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_356429, whole genome shotgun sequence.
ACCESSION   DASSYW010000166 DASSYW010000000
VERSION     DASSYW010000166.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2254)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2254)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2254
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_356429"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(123..986)
                     /locus_tag="VFN38_02600"
     CDS             complement(123..986)
                     /locus_tag="VFN38_02600"
                     /inference="COORDINATES: protein motif:HMM:NF012707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HET9010670.1"
                     /translation="MRRLLPPLAALLLLGPWATAPAAAASATLDRIKEKGAITFAYRD
                     GAAPFSFKDRTGRVRGYSVELCTRAALAVQRELQLKELRIDWVPVDAATRFDTVASGR
                     VDAECGTSTITLARMKTVDFSLPIFVDGGSVLVRARSKLARFKDLKGKRIAVIAGTTT
                     EQGLARALSNADAPAILVPVKNGGEGMALLTQGKVDGYAGDRVVLAGFRMRSSSPDAY
                     EVIGEDFSYEPYALVLPRNDADFRLAVNSALAGLYRTGDIDPIFQRWLGNLGKPGTLL
                     HSMFYLNTLPE"
     gene            1364..>2254
                     /locus_tag="VFN38_02605"
     CDS             1364..>2254
                     /locus_tag="VFN38_02605"
                     /inference="COORDINATES: protein motif:HMM:NF028178.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HET9010671.1"
                     /translation="MLPTDHPPLARRDLWRIGALIALAAAACLWVSFRFLEPIPPRQI
                     VIASGPDGSLYHRHALQYKASLEREGVTLVERTTEGAGENLRLLGDPASGVDIAFVQG
                     GQADAPEAKGVVMLASLYYQPLWIFVRRGEGVETLNALANRRISTGMPGSGSHALGEP
                     LLAANGVTAANATLMPVPTDRARGALEAREVDAALMVGGIRTSAIQAALADPALELVS
                     LAHADAFAQRYPYLTRRTLRAGAIAFVPLLPAKDVALVSTEAMLAARHDLHPAIVNLL
                     LEVIRDNHDDQGFFESPGEFP"
BASE COUNT          340 a          776 c          800 g          338 t
ORIGIN      
        1 gttcgacgcc ggcggaatcg gcgggggcgt cgtctgcgcg tcggcgaacg cggcggcgag
       61 ggacacggag gccgcgagtg ccgcgcgcgc gacttcggcg acgaaggtcg aagaggccat
      121 gatcactccg gcagcgtgtt caggtagaac atggagtgca ggagcgtgcc cggcttgccg
      181 aggttgccga gccagcgctg gaagatgggg tcgatgtcgc cggtgcgata cagccccgcg
      241 agcgcgctgt tcacggcgag gcggaaatcc gcgtcgttgc gcggcagcac gagcgcgtag
      301 ggctcgtacg agaagtcctc gccgatgact tcgtacgcat cgggcgagct cgagcgcatc
      361 cggaatcccg ccaggacgac ccggtcgcct gcgtagccgt cgaccttgcc ctgcgtcagg
      421 agcgccatgc cttcgccgcc gttcttgacg gggaccagga tcgcgggcgc atcggcattg
      481 ctcagcgccc gcgcgaggcc ctgctccgtc gtcgtgcccg cgatcacggc gatccgcttg
      541 cctttgaggt ccttgaatcg cgcgagcttc gaccgcgcgc gaacgaggac gctgccaccg
      601 tccacgaaga tcggcaggct gaaatcgacg gtcttcatcc gcgcgagggt gatcgtgctc
      661 gtgccgcact cggcgtcgac gcggccgctc gcgacggtat cgaaccgtgt cgccgcgtcg
      721 accggcaccc agtcgatccg cagctccttc agctggagct cgcgctgcac ggcgagcgcc
      781 gcgcgcgtgc agagctcgac gctgtagccg cggacgcggc cggtacggtc cttgaacgag
      841 aatggcgccg cgccgtcgcg ataggcaaac gtgatcgcac ccttctcctt gatcctgtcc
      901 agggtggcgg acgccgcggc cgcgggcgcg gtagcccaag ggccgagcag gagcagagcg
      961 gcgagcggtg ggagcagtcg gcgcatcgcg acaccgaaag aaaacgagtc gcgccgagtg
     1021 tagcatggcg gtcccgcgcg ggcgcgcgct acgcgacgag tccggctgga tcccgtgtcg
     1081 agctcatcgg tggcaatgca tggccgggtt gaccggcacg tcgaccgtac gggaacggga
     1141 atcggcgcgg cgccagattg cgaaggcgcg tacgatgcca gcgcacgcag aagtgtccgc
     1201 tgccggtcct ccccatcgac atcggcaacg actggaatct gatcatgcgc atcatcttgc
     1261 ccttgacgga ctcgatcgcg gtggcggcgg acgcgaccgg cgcgggtggg gtgtgccatc
     1321 ggccgactcg tgaagaaggt gactggccgt ggcgccgcgc ttgatgcttc cgacggatca
     1381 cccgcctctc gcccggcgcg acctctggcg catcggcgcg ctgatcgcgc tggcggcggc
     1441 cgcctgtctg tgggtgtcct tccggttcct cgagccgatc ccgccgcggc agatcgtcat
     1501 cgcgtccggc cccgacggca gtctctacca ccgtcatgcg ctgcagtaca aggcttcgct
     1561 cgagcgcgag ggcgtgacgc tcgtcgagcg aacgaccgag ggcgccgggg agaacctccg
     1621 acttcttggc gatccggctt ccggcgtcga catcgcgttc gtgcagggcg gccaggccga
     1681 cgcgccggag gcgaagggcg tggtcatgct cgcgagcctc tactaccagc cgctgtggat
     1741 cttcgtgcgc cgcggcgagg gcgtcgagac gctcaacgcg ctggccaaca ggcggatttc
     1801 caccggcatg ccgggcagcg gcagccatgc gctcggcgag ccgctcctcg ccgcaaacgg
     1861 cgtgaccgcg gccaacgcca cgcttatgcc ggtgccgacc gaccgcgcgc gaggagcgct
     1921 ggaggcacgc gaagtcgatg cggcattgat ggtcggcggc attcgcacgt ccgccatcca
     1981 ggccgcgctc gccgacccgg cgctcgagct cgtcagcctg gcccatgcag acgcgttcgc
     2041 gcagcgctat ccgtacctga cacggcgcac gctgcgcgcc ggcgcgatcg ccttcgtgcc
     2101 gctcctgccg gcgaaagacg tcgcgctggt cagcaccgag gccatgctgg cggcgcgcca
     2161 cgatctccac cccgcgatcg tcaacctgct gctcgaggtg attcgcgaca accacgacga
     2221 ccagggcttc ttcgagtcgc ccggcgagtt cccg
//
LOCUS       DASSYW010000167         2960 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1537417, whole genome shotgun sequence.
ACCESSION   DASSYW010000167 DASSYW010000000
VERSION     DASSYW010000167.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2960)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2960)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2960
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1537417"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1396)
                     /locus_tag="VFN38_02610"
     CDS             complement(<1..1396)
                     /locus_tag="VFN38_02610"
                     /inference="COORDINATES: protein motif:HMM:TIGR00813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:solute symporter"
                     /protein_id="HET9010672.1"
                     /translation="MTRFTTIDAIVLVAYLAGTLTLGLYVGRKQKDAKDYFVADRAIP
                     WWAVMFSIVASETSALTFISTPGLSYGNKPGFGDLGFLEVVAGYIIGRFVVAGVLLPR
                     YFQGNLVTAYALLEKRFGLATRRFTSIVFMVTRALADSVRVFATAIPVALIISPSITN
                     KSLVMPAAVLILGFLTVIYTYKGGMKAVVWTELLQAGIYISGGIGAVLILGHLVPGGW
                     SEIWSSASAAGKTKVLDFYPGLDRPHTVWAGLIGGAFLAMASHGTDQLIVQRLMSSRS
                     LRDAQRAIIGSGFVVFCQFFLFLAIGLGLWAFYHGQLFPATDQIFPTFILEHMPPGLV
                     GLIVAAIVAATMSTHSGAINSLAAATTHDIYLPLTKRAPDDANTLKMGRRFALVWGCV
                     LTLGALLFPQDTKTPVVVIALGIASFTYGGLLGGFFLGIFWRRAIQRDAILGMSVAIA
                     TMAFIVFAGPISAWY"
     gene            complement(1406..>2960)
                     /locus_tag="VFN38_02615"
     CDS             complement(1406..>2960)
                     /locus_tag="VFN38_02615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PIG-L family deacetylase"
                     /protein_id="HET9010673.1"
                     /translation="MWENLFSHVDVRPEHVHIPRGDVPRDEVDAMCAEYEGKIRLAGG
                     IDFQILGVGKTGHIGFNEPGSGVDSRTRVVHLDAVTRRDAAADFFGEEFVPKEAVTMG
                     VATIMEAREIAILATGEHKAAIVKRAVEGEVSLSVAATFLQRHPDTTFYVDKAAGAAL
                     TRIATPWLIDEVDWTPELMLRAVVWLSQQTGCAILKLTERDYAEHGMSSLVAARGSPG
                     AVNGEVFNALGAKIRGKSKLPTNRRTICFSPHPDDDVISMGGILRKFVQNGNEMLVAY
                     MTSGNIAVFDHDVRRYVDFLRRLATESGIGDKMVNALADSVNAFLTSKEAGDVDIPEI
                     QDIKRIIRESEAVAGIEVMGLTKENARFLNLPFYQTGKVKKDPIGPADVAIVRDLLNE
                     FQPEIIFVAGDLSDPHGTHRMCKEAIDLALRELTFPRPEVWLYRGAWQEWDVTDATWL
                     VPMSQEELRLKIQAIFKHQSQKDSAPFPGQDDREFWQRVDARNKDTAALLDRLGLAEY
                     FAMEAYVVE"
BASE COUNT          503 a          974 c         1018 g          465 t
ORIGIN      
        1 gataccaggc cgagatggga ccggcgaaga cgatgaacgc catcgtggcg atggcgaccg
       61 acatgccgag gatggcgtcg cgctggatcg cgcgccgcca gaagatgccg aggaagaagc
      121 cgccgagcag cccgccgtag gtgaacgagg cgatgccgag ggcgatcacg acgaccggcg
      181 tcttggtgtc ctgcggaaag agcagggcgc cgagcgtcag cacgcagccc cacaccaggg
      241 cgaagcgacg gcccatcttc agcgtgttcg cgtcatccgg cgcgcgcttg gtgagcggca
      301 gatagatgtc gtgcgtggtg gccgcggcga gcgagttgat cgcgccggaa tgcgtgctca
      361 tcgtcgcggc cacgatggcc gccacgatga gcccgacgag cccgggcggc atgtgctcga
      421 ggatgaaggt cgggaagatc tggtcggtgg ccgggaaaag ctggccatga tagaacgccc
      481 agagcccgag gccgatggcg aggaagagga agaactggca gaagacgacg aagccggagc
      541 cgatgatcgc ccgctgcgca tcccggagcg agcgcgacga catcagccgc tgcacgatga
      601 gctgatcggt gccgtgcgac gccatggcga ggaaagcgcc gccgatgagc cccgcccaca
      661 ccgtgtgcgg ccggtccagc ccgggataga aatcgagcac cttcgtcttg ccggcggccg
      721 acgcggagct ccagatctcc gaccagccac cggggacgag gtggccgagg atgagcacgg
      781 cgccgatccc gccgctgatg tagatgcccg cctgcagcag ctccgtccag accaccgcct
      841 tcatgccacc cttgtaggtg tagatcacgg tgagaaagcc gaggatcagc accgccgccg
      901 gcatgacgag cgacttgttg gtgatggacg ggctgatgat gagcgccacg gggatcgccg
      961 tcgcgaagac gcgcaccgag tccgccaggg cgcgcgtgac catgaacacg atcgacgtga
     1021 agcgccgcgt ggcgagcccg aaccgcttct ccaggagcgc gtacgccgtg acgaggttgc
     1081 cctggaagta gcgcggcagg agcactccgg ccacgacgaa tcgcccgatg atgtagcccg
     1141 cgaccacctc gaggaacccg aggtcgccga agccgggctt gttgccgtag gagaggcccg
     1201 gcgtgctgat gaacgtcagc gcgctggtct cgctggcgac gatggagaac atgacggccc
     1261 accacggaat cgcgcggtcg gcgacgaagt agtccttcgc gtccttctgc ttccgcccga
     1321 cgtagagccc gagcgtgagg gtgccggcca ggtacgcgac gagaacgatc gcgtcgatcg
     1381 tggtgaagcg ggtcatgtgc ctcccttatt cgacgacgta ggcttccatg gcgaagtact
     1441 cggccagccc gagccggtcg agcagtgcgg cggtgtcctt gttgcgcgca tcgacgcgct
     1501 gccagaactc gcgatcgtcc tggccgggga agggcgccga gtccttctgg gactgatgct
     1561 tgaagatcgc ctggatcttc agccgcagct cctcctgcga catcggcacg agccaggtgg
     1621 cgtcggtgac gtcccactcc tgccacgcgc cccggtacag ccagacctcc ggccgcggga
     1681 aggtgagctc gcgcaacgcc agatcgatcg cttccttgca catccggtgc gtgccgtgcg
     1741 gatcggagag gtcgcccgcg acgaagatga tctccggctg gaactcgttg agcaggtccc
     1801 gcacgatcgc cacgtcggcc gggccgatgg gatccttctt caccttgccc gtctggtaga
     1861 acggcaggtt caggaagcgc gcgttctcct tcgtgaggcc catgacctcg atgcccgcca
     1921 ccgcctcgct ctcgcggatg atgcgcttga tgtcctggat ctccgggatg tccacgtcgc
     1981 ccgcctcctt gctcgtgagg aaggcgttca cgctatcggc gagggcgttg accatcttgt
     2041 cgccgatgcc gctctccgtc gccagccggc ggaggaagtc cacgtagcgg cggacgtcgt
     2101 ggtcgaacac ggcgatgttg ccgctcgtca tgtaggcgac gagcatctcg ttgccgttct
     2161 gcacgaactt gcgcaggatg ccgcccatcg agatgacgtc gtcgtccgga tgcggagaga
     2221 agcagatggt gcggcgattc gtcggcagct tgctcttgcc gcggatcttg gcgccgaggg
     2281 cgttgaacac ctcgccgttc accgcacccg gcgatccacg agcggcgacg agcgacgaca
     2341 tcccgtgctc ggcgtagtcg cgctcggtga gcttgaggat ggcgcagccc gtctgctgcg
     2401 acagccagac gacggcgcgg agcatcagct cgggcgtcca gtccacctcg tcgatcagcc
     2461 agggcgtcgc gatgcgcgtg agcgccgcgc cggccgcctt gtccacgtag aacgtcgtgt
     2521 ccggatgccg ctggaggaag gtcgccgcca ccgacaggct gacctcgccc tccacggcgc
     2581 gcttcacgat cgcggccttg tgctcgcccg tcgccaggat ggcgatctcc cgcgcttcca
     2641 tgatcgtggc gacgcccatc gtcaccgctt ccttcggcac gaactcctcg ccgaagaagt
     2701 cggcggcggc atcgcggcgc gtcacggcat ccaggtgcac cacgcgggtg cggctgtcca
     2761 ctcccgagcc gggctcgttg aagccgatgt ggcccgtctt gccgacgccg aggatctgga
     2821 agtcgatccc ccccgcgagc cggatcttgc cctcgtactc ggcgcacatt gcgtccactt
     2881 cgtcgcgcgg cacgtcgccg cgggggatgt gcacgtgctc cgggcggacg tccacgtggg
     2941 agaacaggtt ctcccacatg
//
LOCUS       DASSYW010000168         3121 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1701271, whole genome shotgun sequence.
ACCESSION   DASSYW010000168 DASSYW010000000
VERSION     DASSYW010000168.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3121)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3121)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3121
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1701271"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1324
                     /locus_tag="VFN38_02620"
     CDS             <1..1324
                     /locus_tag="VFN38_02620"
                     /inference="COORDINATES: protein motif:HMM:NF025067.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF4173 domain-containing protein"
                     /protein_id="HET9010674.1"
                     /translation="FALGMAAISLADVRVALFAERMRDTVWTGARVIGSIAIGVVPLA
                     FRDAAIPVADVEMRGRARPIVRALLIALPLLVVFGSLLRGADPVFASIIAFPDIDFGE
                     LASHVLVIGFFTWVVSGWARASLMHGPATVRAPEILPFSLNRLDITAALGTLNVLFAL
                     YVITQLGWFFGGEAFLQARTGLTAAEYARQGFFQMVWVVLLVVPLLLVTRATLRPDHD
                     LERRHTMLALPLIGLLGVMIVSAMLRMRLYVHYFGLTLERFYPMVFMGWLAIVLAWMA
                     FTVLRNRGRFFAAGAVTAALAILVLLNLAVPDVLVARVNVARAQAPAQTTEPALDLAH
                     LATLGGEAMPLAVSALLTSRSAGADSAALAQTRDRCLAARVLLRRWGPSGRLVARREA
                     SDAPWRRWNAGVAGATRVVQDAYRPLLAVQHDACPRARASGATAPAGR"
     gene            complement(1302..2201)
                     /locus_tag="VFN38_02625"
     CDS             complement(1302..2201)
                     /locus_tag="VFN38_02625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010675.1"
                     /translation="MRLAGCSAPLVATLLLAAGGTPADAQVARGSACLDSLPASLMKR
                     IPVYAAAEVADADPMPPAAVASMDLLTQAMAEQARALLGAGPGQLPPGEPQITWRHLD
                     HRLFVVAHRDGRVTSRVQPPVWLSDQSLGDGGARHLGRALDSARAKGEAFFWDDGIRR
                     DSVTWLVRLEPSLLGEDGGVAPPALRAGFPVFSVLSPSIQPADVERMRTNFPMVRIRG
                     FSGTVRLQFVIDTAGRAVASTIRPIWPPNEARLVGPPRFAYDSLVRIMQTTLEQARFA
                     PARIGRCTVSQLVQQAFTYRPAR"
     gene            complement(2206..2706)
                     /locus_tag="VFN38_02630"
     CDS             complement(2206..2706)
                     /locus_tag="VFN38_02630"
                     /inference="COORDINATES: protein motif:HMM:NF003819.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YajQ family cyclic di-GMP-binding protein"
                     /protein_id="HET9010676.1"
                     /translation="MAQTASFDVTTGVDLQEVDNAINQAQKEIAQRYDFKGSKATIEF
                     KRAEKLIALVADSDFQMTALFDVVQSKLIKRGVPVKNLDIGEVKQAAGDTVRRDVKLK
                     MELDGETAKKVAAAIKDAKLKKVQASIQGEQVRISGPSRDDLQEAIALLKSKDFGVQL
                     QFGNYR"
     gene            complement(2795..>3121)
                     /locus_tag="VFN38_02635"
     CDS             complement(2795..>3121)
                     /locus_tag="VFN38_02635"
                     /inference="COORDINATES: protein motif:HMM:NF021081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2378 family protein"
                     /protein_id="HET9010677.1"
                     /translation="GESSASKNLASAHKAYLTKGDAHGFLSKAPQIYRMYYDVGRREY
                     QRTGEREGVLTTYEAETYSVPDCSTIVGWHRKALEMCDVKGPRVVEEECRARGAAQCR
                     YRVSWS"
BASE COUNT          389 a         1121 c         1086 g          525 t
ORIGIN      
        1 gttcgccctc ggcatggccg ccatctcgct cgccgacgtg cgcgttgccc tcttcgcgga
       61 gcgcatgcgg gataccgtct ggacaggcgc ccgggtgatc gggtccatcg ccatcggcgt
      121 cgtgccgctc gcgttccgcg acgccgccat cccggtggcc gacgtggaga tgcgcggccg
      181 ggctcggccc atcgtccgcg ccctgctcat cgcgcttccc ctgctcgtcg tcttcggatc
      241 gctgctgcgt ggcgcggacc ccgtgttcgc cagcatcatc gcctttcccg acatcgactt
      301 cggcgagctc gcgtcgcacg tgctggtcat cgggttcttc acgtgggtcg tctccgggtg
      361 ggcgcgcgcg tcgctcatgc acggtcccgc gaccgtccgt gccccggaga tcctgccctt
      421 ctcgctgaac cggctcgaca tcaccgcggc cctgggcacg ctgaacgtcc tgttcgcgct
      481 ctacgtgatc acgcagctcg gctggttctt cggcggcgaa gcctttctcc aggcgcgcac
      541 cggcctcacg gcggccgagt atgcacgaca gggattcttc cagatggtgt gggtggtgct
      601 gctcgtggtg ccgctcctgc tggtgacgcg ggcgacgctg cggccggacc acgacctcga
      661 gcgtcgacac acgatgctgg cgcttcccct gatcggcctg ctcggcgtca tgatcgtgtc
      721 ggccatgctg cgcatgcgac tgtacgtaca ctacttcggc ctcacgctcg agcgcttcta
      781 ccccatggtg ttcatgggat ggctagcgat cgtgctcgcc tggatggcgt tcaccgtgct
      841 gcggaaccgc ggacggttct tcgccgccgg ggccgtcacc gcggcgctcg ccattctcgt
      901 cctgctcaat ctcgccgtgc ccgacgtgct ggtggcccgc gtgaacgtcg cgcgtgcgca
      961 ggcgccggcg cagacgaccg agcccgcgct cgacctggcg catctcgcga cgctcggcgg
     1021 cgaggccatg cctctcgcgg tgtcggcgct cctcacctcg cggtcggcgg gggcggattc
     1081 ggccgcgctg gcgcagaccc gcgaccgctg cctggccgcg cgcgtgctcc tgcggcggtg
     1141 gggcccctcc ggccggctgg tcgcgcggcg agaggcgagc gatgcgccgt ggcgcaggtg
     1201 gaacgcgggg gtcgcgggcg ccacgcgggt cgtgcaggac gcctatcgtc cgctgctcgc
     1261 cgtgcagcac gacgcctgcc ctcgcgcgcg ggcgagcgga gctaccgcgc cggccggtag
     1321 gtgaaggcct gctgcacgag ctggctcacg gtacagcggc cgatgcgcgc cggcgcgaag
     1381 cgcgcctgct cgagcgtcgt ctgcatgatg cgcacgaggg agtcataggc gaatcgcggg
     1441 gggcccacga gacgcgcctc gttgggcggc cagatcggcc ggatcgtgga cgccacggcg
     1501 cgtccggccg tgtcgatcac gaactgcagc cgcaccgttc ccgaaaaccc gcggatgcgc
     1561 accatcggaa agttggtgcg catccgttcc acgtcggcag gctggatgga cgggctcagc
     1621 acgctgaaga cgggaaaccc cgcccgcagt gcgggcggcg cgacgccgcc gtcctccccg
     1681 agcaacgagg gctcgaggcg caccagccac gtgaccgagt cacgcctgat cccgtcgtcc
     1741 cagaagaagg cctcgccctt cgcgcgcgcg gagtcgagcg cgcggccgag atggcgcgcg
     1801 ccgccgtcgc cgaggctctg gtcgctcagc cacaccggcg gctgcacgcg ggacgtgaca
     1861 cgcccgtcgc gatgcgccac gacgaacagc cgatgatcca ggtgccgcca cgtgatctgc
     1921 ggctcaccgg gggggagctg ccccgggccc gcgccgagca gcgcgcgcgc ctgctccgcc
     1981 atcgcctggg tcagcagatc catgctcgcc acggccgctg gcggcatcgg atcggcatcg
     2041 gcgacctccg cggcggcgta cacggggatg cgcttcatga gggacgcggg cagcgagtcg
     2101 agacaggccg agccgcgcgc gacctgcgcg tccgctggcg tgcctcccgc cgcgaggagc
     2161 agggtggcga cgagcggtgc cgagcatccc gcgaggcgca tcgccctacc ggtagttccc
     2221 gaactggagc tggacgccga agtccttgct cttgagcagc gcgatcgcct cctggagatc
     2281 gtcgcgcgac gggccgctga tccgcacctg ctcgccctgg atggaggcct gcaccttctt
     2341 gagcttcgcg tccttgatcg ccgcggccac cttcttcgcg gtctcgccgt cgagctccat
     2401 cttgagcttc acgtcgcgcc gcacggtgtc gccggccgcc tgcttgacct cgccgatgtc
     2461 gagattcttc accggcacgc cgcgcttgat gagcttcgac tgcacgacgt cgaacagcgc
     2521 cgtcatctgg aagtcgctgt ccgcgacgag ggcgatgagc ttctcggcgc gcttgaactc
     2581 gatcgtcgcc ttggagccct tgaagtcgta acgctgcgcg atctccttct gcgcctggtt
     2641 gatcgcgttg tcgacttcct ggaggtcgac gccggtcgtg acgtcgaagg aggcggtctg
     2701 ggccatcgga gggagtactg ggtggacgtg ggtcgccgtc gtccaaagct ggtccgctac
     2761 taccgcggtc cgcaacccgc acgcgcggct gcggtcagct ccagctcacc cgatagcggc
     2821 actgcgcggc gccccgggcg cggcattcct cttccacgac gcgcgggccc ttgacgtcgc
     2881 acatctcgag cgccttccgg tgccagccga cgatcgtgct gcaatcgggg acgctgtacg
     2941 tctcggcctc gtacgtcgtg agcacgcctt cgcgctcgcc ggtgcgctgg tactcgcggc
     3001 gacccacgtc gtagtacatg cggtagatct gcggcgcctt ggagaggaag ccgtgcgcgt
     3061 cgcccttcgt gaggtaggcc ttgtgcgcgg acgcgaggtt cttcgaggcg gacgactcgc
     3121 c
//
LOCUS       DASSYW010000169         2462 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_988711, whole genome shotgun sequence.
ACCESSION   DASSYW010000169 DASSYW010000000
VERSION     DASSYW010000169.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2462)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2462)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2462
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_988711"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(56..>2462)
                     /locus_tag="VFN38_02640"
     CDS             complement(56..>2462)
                     /locus_tag="VFN38_02640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010678.1"
                     /translation="RTKRGSGNAEGATAITTRSEVGSNSLGGKIHWATEHYYLTNAAG
                     QYVNAAGTVVPRAQRVAKPVYSRFQDTPYADPIYDQVDRFFNPGTFYKNSVTLSQKAG
                     RTNWLLSFNNNREGGVVLNSGAFDQNNIRLNLDHQLRDDFKLSFSGYHNRSNRQNLYG
                     DTFFDLINQAPDVDLLVPDPDGTPYLFQGDPEGREENPLYVLATEENTRRRARTQGSI
                     EARWTPLSWFNVDGNVSYDRSDRRNNFFLDAGLKTEGFGTGGLGEIRQVAGQTDAINA
                     SASANLLGQLGAFTLRSTLRALLERENNEVTTAEGTNFATPGVRSLSNATITRDSSSI
                     EEIRSTGYAATGAADYRGKYIVDALVRRDGSSLFGPEERWNVYHRLSGAYRMAEESWW
                     PVRSISEFKLRASRGTAGGRPDFDDQFETFDFLTGGGLRKNTLGNKFLKPEHATETEL
                     GLDMIIKDRYSVQLSYAKNRVVDQLVQIPLSAFYGYTSQWQNAGTVEGNTVEATFEAQ
                     LMRRPTFSWRMGLVADRSRNRITEFDRSCFQTDVIGYRCAGESLGAMYGFRFIKDASE
                     LPAEAQARANEFQVNDEGILVYVGPGNAYTEGESKRLWGTPAVTIGSGVYNWGMPITQ
                     KDANGNAAVVKIGEGTPDFHFGWTNNVSGKDFSFFALLDAQRGGQVYNQTMQRMFQYG
                     RSGEVDQADKPQELKKTVDYYVAAYAANDPTDYFVQPAGFVKLREVSVRYKVPARFAS
                     LGRAGARGVTLGLVGRNLLTLTDYKGYDPEVSDSNFPNTIKLDSFGYPRYRTFTGSVQ
                     IDF"
BASE COUNT          339 a          813 c          855 g          455 t
ORIGIN      
        1 agcaccgcgg ctccgaccca atatgtgcgt ctctgcatga tgtctgttgt gtgggtcaga
       61 agtcgatctg gacgctgccc gtgaacgtgc ggtagcgcgg atagccgaag ctgtcgagct
      121 tgatggtgtt cgggaagttc gagtcgctca cctcggggtc atagcccttg taatcggtga
      181 gcgtgagcag gttgcggccc acgaggccga gggtgacgcc ccgggcgccc gcgcgaccca
      241 gcgacgcgaa ccgcgccggc accttgtagc gcaccgacac ctcgcgaagc ttcacgaacc
      301 ccgccggctg cacgaagtag tcggtgggat cgttcgccgc gtaggccgcg acgtagtagt
      361 ccaccgtctt cttcagctcc tgcggcttgt ccgcctggtc cacctcgccg ctgcggccgt
      421 actggaacat gcgctgcatg gtctggttgt agacctggcc cccgcgctgc gcgtcgagca
      481 gcgcgaagaa gctgaagtcc ttcccgctca cgttgttcgt ccagccgaag tggaagtccg
      541 gggtgccctc gccgatcttc accacggcgg cgttgccgtt ggcgtccttc tgcgtgatcg
      601 gcatccccca gttgtacacg cccgagccga tcgtgacggc cggcgtcccc cacagtcgct
      661 tcgactcgcc ctcggtgtag gcgttgcccg ggcccacata gacgaggatc ccctcgtcgt
      721 tcacctggaa ctcgttcgcc cgcgcctgcg cctcggccgg cagctcgctg gcgtccttga
      781 tgaagcggaa gccgtacatc gcgcccagcg actcgccggc gcagcggtag ccgatgacgt
      841 cggtctggaa gcacgagcgg tcgaactccg tgatccggtt gcgcgaccgg tcggcgacga
      901 gacccatccg ccagctgaag gtgggccggc gcatcagctg cgcctcgaac gtcgcctcca
      961 ccgtgttgcc ttccaccgtg cccgcgttct gccactgcga ggtgtagccg tagaaggcgg
     1021 acagcgggat ctgcacgagc tggtcgacga cgcggttctt cgcgtacgag agctggaccg
     1081 agtaccggtc cttgatgatc atgtcgagcc cgagctcggt ctccgtcgcg tgctcgggct
     1141 tgaggaactt gttgccgagc gtgttcttcc ggagcccgcc gcccgtgagg aagtcgaagg
     1201 tctcgaactg gtcgtcgaag tccggccggc cgccggccgt gccgcgcgac gcgcgcagct
     1261 tgaactccga gatcgaccgc accggccacc acgactcctc ggccatgcgg tacgcgccgc
     1321 tcaggcggtg gtacacgttc cagcgctcct cggggccgaa cagcgagctg ccgtcgcggc
     1381 gcacgagggc gtcgacgatg tacttgcccc ggtagtcggc ggcgcccgtc gcggcgtagc
     1441 cggtggagcg gatctcctcg atcgacgagc tgtcgcgcgt gatcgtggcg ttgctcaggc
     1501 tgcgcacgcc cggcgtggcg aagttggtgc cctccgccgt cgtcacctcg ttgttctcgc
     1561 gctcgagcag ggcgcgcagc gtggagcgca gggtgaaggc gcccagctgg ccgaggaggt
     1621 tcgcgctcgc cgacgcgttg atcgcgtcgg tctggccggc cacctgccgg atctccccca
     1681 gcccgcccgt gccgaaccct tcggtcttca ggccggcgtc gaggaagaag ttgttgcggc
     1741 ggtcggagcg gtcgtagctc acgttgccgt ccacgttgaa ccacgagagc ggggtccacc
     1801 gcgcctcgat gctcccctgg gtgcgggcgc gacggcgggt gttctcctcc gtggccagca
     1861 cgtagagcgg gttctcctcg cgcccttccg ggtcgccctg gaacaggtac ggcgtgccgt
     1921 ccggatcggg gaccaggagg tcgacgtcgg gcgcctggtt gatcaggtcg aagaaggtgt
     1981 caccgtacag gttctgccgg ttggaccggt tgtggtagcc gctgaacgac agcttgaagt
     2041 cgtcgcgcag ctggtggtcc aggttgaggc ggatgttgtt ctggtcgaac gcgccgctgt
     2101 tcagcacgac gcccccttcc cggttgttgt tgaaggagag cagccagttg gtgcggccgg
     2161 ccttctgcga cagcgtcacc gagttcttgt agaaggtgcc gggattgaag aagcggtcca
     2221 cctggtcgta gatcggatcg gcgtaggggg tgtcctggaa gcgcgagtac accggcttcg
     2281 cgacgcgctg cgcgcgcggc accaccgtgc cggcggcgtt cacgtactgg ccggcggcgt
     2341 tggtgaggta gtagtgctcg gtggcccagt ggattttgcc gcccagcgag ttgctcccca
     2401 cctcggagcg cgtggtgatc gccgtcgccc cctcggcgtt gcccgagccg cgcttcgtgc
     2461 gg
//
LOCUS       DASSYW010000170         2128 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1320559, whole genome shotgun sequence.
ACCESSION   DASSYW010000170 DASSYW010000000
VERSION     DASSYW010000170.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2128)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2128)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2128
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1320559"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..231
                     /locus_tag="VFN38_02645"
     CDS             <1..231
                     /locus_tag="VFN38_02645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010679.1"
                     /translation="VPLSAVDERGLRPYVVRLKGGRIEKAEVTLGIRDAAAETVEITN
                     GVAPGDTLLLGAARGISPGTPVKVSAPSDVRK"
     gene            343..>2128
                     /locus_tag="VFN38_02650"
     CDS             343..>2128
                     /locus_tag="VFN38_02650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HET9010680.1"
                     /translation="MFISDFAIKKPLITVVSMVTLVVFGLFALLKLKTDEFPDVAPPV
                     VTVGIPYPGASPEGVEKEILDPIEEQISSISGVKHVYGKAYDGYGFIMVEFQFGKDLM
                     EATQDLRDAISAKRADLPLEMKEPIVQKFNDTDRPIVSMALSSSTLSQAELTRLADPT
                     ITRELRSIPGVAEVSVSGKVERELTVELKPQQMQATGVSVGQVVQALQLQNLAAPVGR
                     VVGDMDERSIRLKGRLENPQEFAQLVVAERNGQVIRLGDIANVRDGTEEPRTLALYND
                     QEAVGIDVKKAKGYSTTDVSDKVRARVAQLQPTLGKGTKLELVKDAGERVDHAVKNVE
                     EALLEGAALTVLVVFLFLNSWRSTVITGLALPVSVLASFIAVWVLGFKLETMSLLGLS
                     LAIGILIDDAIVVRENIVRHVEMGKDHYTASREGTDEIGLAVAATTFSILAVFIPIGF
                     MPGVGGQWFKPFALTIACSVFVSLFVSFSLDPMLSAYWADPHVPEDKKPWITKKLDIF
                     NHWFNHQANRYRNVIAWALDHRSAMMALAIGTFFASFTLFKGGVTGLLGAFVGIGVLV
                     WAFTNKRLTRLPKIAAVLAGLALFYAMPK"
BASE COUNT          349 a          660 c          755 g          364 t
ORIGIN      
        1 gtgccgctgt cggcggtgga cgagcgcggg ctgcggccgt acgtggtgcg cctgaagggc
       61 gggcggatcg agaaggccga ggtgacgctg ggcatccgcg acgcggcggc ggagacggtg
      121 gagatcacga acggcgtggc gccgggcgac acgctgctgc tcggcgcggc gcgcggcatc
      181 tcgccgggca cgccggtgaa ggtgtcggcg ccaagtgatg tgagaaagtg aaatggatga
      241 cgggatgacg ggatgacgga atgacgggaa cgacatcccg tctccgctcc cggttctccc
      301 gtcctcccgt ctgcctgtcc tcccgtcatc cggtacttcc ccatgttcat ctccgatttc
      361 gcgatcaaga agccgctcat caccgtggtg tcgatggtga cgctggtggt gttcgggctg
      421 ttcgcgctac tgaagctcaa gaccgacgag ttccccgacg tcgcgccccc cgtggtgacg
      481 gtgggcattc cgtatccggg tgcgtcgccg gaaggggtcg agaaggagat cctcgatccg
      541 atcgaggagc agatctcgtc gatcagcggg gtgaagcacg tgtacgggaa ggcgtacgac
      601 ggctacggct tcatcatggt ggagttccag ttcggcaagg acctgatgga ggcgacgcag
      661 gatctgcgcg acgccatctc ggccaagcgc gccgacctgc cgctcgagat gaaggagccg
      721 atcgtccaga agttcaacga caccgaccgg ccaatcgtgt cgatggcgct gtcgtcgagc
      781 acgctgtcgc aggcggagct cacgcggctg gccgatccga cgatcacgcg cgagctgcgc
      841 tcgatccccg gcgtggccga ggtgtcggtg agcggcaagg tggagcgcga gctgacggtg
      901 gagctcaagc cccagcagat gcaggcgact ggggtgagcg tggggcaggt ggtgcaggcg
      961 ctccagctcc agaacctcgc cgcgcccgtg gggcgcgtcg tcggcgacat ggacgagcgc
     1021 tcgatccgcc tcaagggccg tctggagaac ccgcaggagt tcgcgcagct cgtcgtggcg
     1081 gagcgcaacg gccaggtgat ccgcctgggc gacatcgcca acgtgcgcga cggcaccgag
     1141 gagccgcgca ccctggcgct gtacaacgac caggaggcgg tcgggattga tgtcaagaag
     1201 gcgaaaggct acagcactac cgatgtctca gacaaagtgc gcgcgcgggt ggcgcagctg
     1261 cagccgacgc tgggcaaggg gacgaagctc gagctcgtga aggacgcggg cgagcgggtg
     1321 gatcacgcgg tgaagaacgt ggaggaggcg ctgctcgagg gcgcggcgct gacggtgctg
     1381 gtcgtcttcc tgttcctcaa ctcgtggcgg tccaccgtca tcaccggcct cgcgctgccg
     1441 gtgtcggtgc tggcgagctt catcgccgtg tgggtgctgg gtttcaagct ggagacgatg
     1501 tcgctgctcg gcctctcgct ggccatcggc atcctgatcg acgacgcgat cgtggtgcgc
     1561 gagaacatcg tgcgacacgt ggagatgggt aaagaccact acacggcgtc gcgcgagggg
     1621 accgacgaga tcgggctcgc cgtggcggcg acgaccttct cgatcctcgc cgtgttcatc
     1681 ccgatcggct tcatgccagg ggtgggcggc cagtggttca agccgttcgc gctgacgatc
     1741 gcctgctccg tgttcgtgtc gctgttcgtc tccttctcgc tcgatccgat gctctccgcc
     1801 tactgggcgg atccccacgt gcccgaggac aagaagccct ggatcacgaa gaagctcgac
     1861 atcttcaacc actggttcaa ccaccaggcg aatcgctacc ggaacgtcat cgcctgggcg
     1921 ctcgaccacc gctcggcgat gatggcgctg gcgatcggca ccttcttcgc ctcgttcacg
     1981 ctgttcaagg gcggcgtcac cggactgctc ggtgccttcg tcgggatcgg agtgctcgtc
     2041 tgggccttca ccaacaagcg tctcacgcgc ctgccgaaga tcgccgcggt gctcgccggg
     2101 cttgccctct tctacgcgat gccgaagc
//
LOCUS       DASSYW010000171         3074 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_394923, whole genome shotgun sequence.
ACCESSION   DASSYW010000171 DASSYW010000000
VERSION     DASSYW010000171.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3074)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3074)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3074
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_394923"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1398)
                     /locus_tag="VFN38_02655"
     CDS             complement(<1..1398)
                     /locus_tag="VFN38_02655"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HET9010681.1"
                     /translation="MHASRFVVAARSSFVAALLLAGATPRAGAQHTVDWPVYGGSDDH
                     THYTNLGQITPANVKRLKVAWTYATHDEFAGSEMQTNPVVVDGVLYGTTPKLRVFALD
                     AATGRELWSFDPNAGAPPTSRIRHRGVVVTGDRVLVNYRNRLYALDKRTGRPIRTFGD
                     TGWVDLRAGLGRPIEGLSVSASSPGVVFEGLLIMGSTVPEALPSAPGDIRAFDVQSGA
                     LRWSFHTIPHPGEPGYETWPPDAWKIAGGANAWSGVTLDATRAMVFVATGSASYDFYG
                     GNRVGDNLYANSVIALDARTGRRVWHYQVLKHDLWDRDLPAAPVLVTVTHGGKPIDAV
                     AQITKTGHVFVLDRETGAPLFPVADRAMPAATLPGDRAAETQHFPVLPPPFARQQLTR
                     ADLTTRTRAAHAAALKLFEQYGTKDPFDPPNEKGTIIFAGVDGGGEWGGPAFDPATGL
                     LYVNANEMAWLLKLVP"
     gene            complement(1442..1933)
                     /locus_tag="VFN38_02660"
     CDS             complement(1442..1933)
                     /locus_tag="VFN38_02660"
                     /inference="COORDINATES: protein motif:HMM:NF019928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HET9010682.1"
                     /translation="MPATAATATNRAILTTPTDREIRVERIFNAPRDRVWKAKNDPAL
                     IAQWWGRGNKLVVEKHEPVRGGRWRYVEHSDQGVHGFEGRYREVVPPERVVRTFEWDG
                     MPGHVIVESATLEDLGDGRTKLVSISLFHTTMERDGMMSSGMEGGMNEAYAALDRVLA
                     AMR"
     gene            complement(1936..2268)
                     /locus_tag="VFN38_02665"
     CDS             complement(1936..2268)
                     /locus_tag="VFN38_02665"
                     /inference="COORDINATES: protein motif:HMM:NF033788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HET9010683.1"
                     /translation="MVQLSERLDSAFAALGDPTRRRVLERLGRGQASISDLAGAFDMT
                     LTGMKKHVHVLESAGLVTTEKVGRVRYCRPGPRRLREETEWIAKYQAMLEARYDRLGE
                     FLERTRGE"
     gene            2332..>3074
                     /locus_tag="VFN38_02670"
     CDS             2332..>3074
                     /locus_tag="VFN38_02670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010684.1"
                     /translation="MPTAVCRRIAFAALFASAPATALAQPSLQPPTRIATVRLGTSRD
                     ALEGSISPDGRSFVFEQADGEQRRLWLLDLPSGTTRLLTPRAGSRHNAAWSSDGRQLA
                     YAADLKLPGYADALQGIWVLDLADGRERLVHGTSRYDMVWEVSWTPDGRIVFVDWAGG
                     QGGTVPVQSVDPRTGAVADVTSDTVRVESPQVSPDGRSLAFLGTPCVDSNRRGLRVLT
                     LGARNDSTSRCLTDVAARTGAPLWSPDGRT"
BASE COUNT          435 a         1045 c         1120 g          474 t
ORIGIN      
        1 cggcacgagc ttgagcagcc acgccatctc gttggcgttc acgtagagca gccccgtcgc
       61 cgggtcgaag gcgggaccgc cccactcgcc gccgccgtcc acgccggcga agatgatggt
      121 gcctttctcg ttcggcgggt cgaagggatc cttcgtgccg tactgctcga agagcttcag
      181 ggccgcggcg tgcgcggcgc gggtgcgcgt cgtgaggtcg gcgcgggtga gctgctggcg
      241 cgcgaaggga ggcggaagga cggggaagtg ctgcgtctcg gcggcgcgat caccgggcag
      301 cgtggccgcc ggcatcgcgc gatcggcgac ggggaagagc ggagcccccg tctcgcggtc
      361 gagcacgaag acgtgccccg tcttggtgat ctgggcgacc gcgtcgatcg gcttgccgcc
      421 gtgcgtgacg gtgacgagca ccggtgcggc ggggaggtcg cggtcccaga gatcgtgctt
      481 cagcacctga tagtgccaga cgcgccggcc ggtgcgcgcg tcgagggcga tcacgctgtt
      541 ggcgtacagg ttgtcgccga cgcggttgcc gccgtagaag tcgtacgacg cggaacccgt
      601 cgccacgaac accatcgcgc gcgtcgcgtc gagcgtgacg ccggaccagg cgttcgcgcc
      661 gccggcgatc ttccacgcat ccgggggcca ggtctcgtag cccggctcgc ccggatgcgg
      721 gatcgtgtgg aagctccacc tgagcgcacc gctctgcacg tcgaaggcgc ggatgtctcc
      781 cggcgcgctc ggcagtgcct cgggcaccgt gctgcccatg atgagcagtc cctcgaacac
      841 gacgccgggg ctgctcgcgc tcaccgacag tccttcgatc ggacggccga gtccagcgcg
      901 gaggtccacc catccggtgt cgccgaaggt gcggatcggc cggcccgtgc gcttgtccag
      961 cgcgtagagg cgattgcggt agttgacgag cacgcggtcg ccggtgacca cgacaccgcg
     1021 gtggcggatg cgcgaggtgg gcggcgcacc ggcgttcggg tcgaagctcc acagctcccg
     1081 tcccgtcgcg gcatcgagcg cgaacacgcg aagcttcggc gtcgtgccgt acagcacccc
     1141 gtccacgacg acgggattgg tctgcatctc cgagccggcg aactcgtcgt gcgtggcgta
     1201 cgtccacgcg accttcagcc gcttcacgtt ggccggcgtg atctggccga ggttggtgta
     1261 gtgcgtatgg tcgtcgctgc cgccgtagac cggccagtcc acggtgtgct gcgcgccggc
     1321 gcgcggggtg gcgccggcga gcagcagggc agcgacgaac gaggaacggg cggcgacgac
     1381 gaagcgcgat gcgtgcacag gcggcggggt gggggagacg cgaccgcctg agatagcacg
     1441 atcagcgcat cgcggccagc acccgatcca gcgcggcgta cgcctcgttc atgccgcctt
     1501 ccatgccgga gctcatcatg ccgtcgcgct ccatcgtggt gtggaagagc gagatgctga
     1561 cgagcttcgt gcggccgtcg cccaggtcct cgagcgtggc ggattcgacg atgacgtggc
     1621 cgggcatgcc gtcccactcg aacgtgcgca ccacgcgttc cgggggcacg acctcgcgat
     1681 agcgtccctc gaagccatgc acgccctggt cggagtgttc cacgtagcgc cagcgcccac
     1741 cgcgcactgg ctcgtgcttc tcgacgacga gcttgttgcc gcgcccccac cactgtgcga
     1801 tgagggccgg atcgttcttc gccttccaga cgcggtcgcg tggggcgttg aagatccgct
     1861 cgacccggat ctcgcggtcg gtgggcgtgg tgaggatggc gcggttggtg gcggtggcgg
     1921 cggtggcggg catgatcact ctcctctggt gcgctcgagg aactccccga gacggtcgta
     1981 acgagcctcc agcatggcct ggtacttcgc gatccactcg gtctcttccc gaaggcggcg
     2041 cggccccgga cggcagtacc gcacgcggcc gactttttcc gtcgtgacga gccccgcgct
     2101 ctccagcacg tggacgtgct tcttcatgcc ggtgagggtc atgtcgaagg cgccggcgag
     2161 gtcgctgatc gacgcctggc cccgaccgag ccgctcgagc actcggcggc gggtggggtc
     2221 gccgagggcg gcgaaggcgg agtcgagccg ttcggaaagc tgaaccatat ggttcagtat
     2281 tacatcactg gcgggattgc gcaaggagcc gacgcccccc gatcgttcgc gatgccgact
     2341 gccgtttgcc gacgcatcgc cttcgccgcc ctgttcgcct ccgcgccggc cacggcgttg
     2401 gcgcagccgt cgctgcagcc cccgacacgc atcgccacgg tgcgcctggg gaccagccgc
     2461 gacgcgctcg agggatccat ctcgccggac ggccgcagct tcgtgttcga gcaggcagac
     2521 ggagaacagc gcaggctgtg gctgctcgac ctgccgagcg ggacgacgcg gctgctcacc
     2581 ccgcgcgccg gttcgcggca caacgcggcc tggtcgagcg atgggcgcca gctcgcgtac
     2641 gcggcagatc tcaagctgcc gggatacgcc gacgcgctcc agggcatctg ggtgctggac
     2701 ctcgccgacg gtcgcgagcg actcgtgcac ggcacctccc ggtacgacat ggtctgggag
     2761 gtgagctgga ccccggacgg acgcatcgtc ttcgtggatt gggccggcgg acaggggggc
     2821 accgtgccgg tgcagtcggt cgatccgcga acgggtgccg tcgcggacgt cacgagcgac
     2881 acggtcaggg tcgagagtcc gcaggtctcc cccgacggcc gctcgctcgc cttcctcggt
     2941 acaccgtgcg tcgactcgaa ccggcgcggc ttgcgcgtgc tcacgctcgg cgcacgcaac
     3001 gactccacgt cgcgatgcct gaccgacgtg gcggcgcgca cgggagcacc actctggtca
     3061 ccggacggtc gaac
//
LOCUS       DASSYW010000172         3039 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1013713, whole genome shotgun sequence.
ACCESSION   DASSYW010000172 DASSYW010000000
VERSION     DASSYW010000172.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3039)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3039)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3039
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1013713"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            112..1296
                     /locus_tag="VFN38_02675"
     CDS             112..1296
                     /locus_tag="VFN38_02675"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HET9010685.1"
                     /translation="MSSAKPTPRYVQRIPAPNIHLVGATAEAQVIPIRRVTPAYVPTI
                     EAPAHPAPVRRRATRFVPVEQRPWRVMLVPPTPGARTRTFGVARWQAQFVVAALAVTL
                     LLAGGAVVALVGAVESPDLFGSSETEQLRDRLEQLQDSLTLARAELATDDEVVGDSLF
                     DVLPGAAIPMPADAGGAKTAASRLAARKPSLSRGARTEGGIEMAPRSLEGLPVIGRLA
                     SGFSRSRRHPVLHIRRPHLGVDVAAPRGTHITAPAAGTVSFVGRKFGFGLVVEMEHGS
                     GVRTRYAHLTASMVHVGDQVAKGTFIATVGSSGITTGPHLHYEVLVRGRQVDPLRYRL
                     PQPAEAQVMESGAGSAGSAAPEAGSTVVPGAGSPEAPDARLRESGAGETIAPVQAAPA
                     PR"
     gene            1372..1500
                     /locus_tag="VFN38_02680"
     CDS             1372..1500
                     /locus_tag="VFN38_02680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010686.1"
                     /translation="MSKLLRGMAAGYGAKKLGGGCFSTILIFIVLWWLLGHFGVFR"
     gene            1508..2428
                     /locus_tag="VFN38_02685"
     CDS             1508..2428
                     /locus_tag="VFN38_02685"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HET9010687.1"
                     /translation="MDGEGNAGDRRERSDRREGGSPGARQQASAKGDRRGGKRTTSTL
                     TYILRSLGAIVVLLGVILYTVRVIQPVYATRGKLGEELRKHAPEVAKAIAPDDTSSIG
                     QFVASPKFQEEKRNFYEDVMRLKQVDSARADSIAHFAVREAYLRGISPAIIFGVMLTE
                     NSRFISNATSNVGAVGLMQVYPKVWLTKEMTRLFGKDLATDSTNVKYGVFILNQYFRP
                     KDRKGNVRERDWATALLRYNGCVRGTNTPRCHTYPSKVKGFIENQGKSICSGRGFYDC
                     IAKPFIEGFIGGSAADSTGKPPAAPGAPSS"
     gene            complement(2463..2900)
                     /locus_tag="VFN38_02690"
     CDS             complement(2463..2900)
                     /locus_tag="VFN38_02690"
                     /inference="COORDINATES: protein motif:HMM:NF024212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HET9010688.1"
                     /translation="MVNDCGDTVPGCTLTLLLLDAARAVEARAEHALGEVGLSLAKLG
                     ALRHLVLAAEPLTLSQVAERHCCGKSNVTQLVDRLEADGFVVRESDPGDRRTIRATVT
                     PAGRAAYGRASALLAEHERSIDAQLGSDRRAELARGLRALREG"
BASE COUNT          433 a         1045 c         1147 g          414 t
ORIGIN      
        1 ctggtgcagg aaggcggcgt cgtgaacggt cgcgtgctga tgggtccccc gggctcgtcc
       61 ggcgcgcacg gccggcccca cgaggcgctc gagccggcgc ggaggtaagc gatgagctcc
      121 gcgaagccca ccccccggta cgtccagcgc atcccggcgc cgaacatcca cctcgtcggg
      181 gccaccgctg aagcgcaggt gatcccgatc cgtcgggtga cgccggcgta cgtgccgacc
      241 atcgaggcgc cggcccaccc ggcgcccgtg cggcggcggg cgacgcggtt cgtaccggtg
      301 gagcagcgcc cctggcgggt gatgctcgtg ccgcccacgc cgggggcgcg cacgcgcacc
      361 ttcggggtcg cgcgctggca ggcgcagttc gtcgtggccg cgctggcggt gacgctgctg
      421 ctcgcgggcg gggccgtggt ggcgctggtg ggcgccgtgg agtcgcccga cctgttcggc
      481 agcagcgaga ccgaacagct ccgcgaccgg ttggagcagc tgcaggactc gctcaccctg
      541 gcgcgggcgg agctcgcgac ggacgacgag gtggtgggcg actccctgtt cgacgtcctg
      601 cccggcgcgg cgatcccgat gccggccgac gcgggggggg cgaagaccgc ggcctcgcgg
      661 ctggccgcgc ggaagccgtc gctgtcgcgc ggcgcgcgca cggagggcgg catcgagatg
      721 gcgccccgct ccctcgaggg gctgccggtg atcgggcggc tcgcgagcgg gttctcccgg
      781 tcgcgccggc atccggtgct gcacatccgc cgcccgcacc tcggggtgga cgtggcggcg
      841 ccgcgcggca cccacatcac ggcgccggcg gcgggcacgg tctcgttcgt cgggcgcaag
      901 ttcggcttcg gcctcgtggt ggagatggag cacgggtcgg gcgtgcggac gcgctacgcg
      961 catctcaccg cgtcgatggt ccacgtcggc gaccaggtgg cgaaggggac cttcatcgcc
     1021 acggtgggct cgagcggaat cacgaccggg ccgcacctgc actacgaggt gctcgtgagg
     1081 gggcggcagg tggatccgct gcgctatcgc cttccgcagc cggcggaggc gcaggtcatg
     1141 gagagtggcg ccggctcggc gggctccgcg gcgccagagg cgggcagcac ggtggtgccg
     1201 ggcgccggct cgccggaagc gccggacgcg cggctccgcg agtcgggagc gggcgagacg
     1261 atcgcgcccg tccaggcggc accggcaccg cgctgacggc ggggggacac ccctcgcccg
     1321 gtacggctcg tgcactccgg acgtgaacac acaaccgtcc ggggtggtgc aatgagcaaa
     1381 ctgctgcgcg gcatggccgc gggctacggg gccaagaagc tgggcggtgg atgcttcagc
     1441 accatcctca tcttcatcgt cctgtggtgg ctgctcggcc acttcggcgt cttccgctag
     1501 cgccccgatg gacggcgagg gaaacgcggg cgatcggagg gagcggagcg atcggcgcga
     1561 gggcggctcg ccgggagcgc ggcagcaggc gagcgcgaag ggggaccggc gcggcgggaa
     1621 gcgcaccacc tcgaccctca cctacatcct gcgctcgctc ggcgcgatcg tcgtgctgct
     1681 cggcgtgatc ctctatacgg tgcgcgtcat ccagcccgtg tacgccaccc gcggcaagct
     1741 gggggaggag ctgcgaaagc acgcgccgga ggtggcgaag gcgatcgcgc cggacgacac
     1801 ctcgtccatc ggccagttcg tcgcctcgcc caagttccag gaagagaagc ggaacttcta
     1861 cgaagacgtg atgcgcctga agcaggtgga ttccgcgcgg gcggactcca tcgcccactt
     1921 cgccgtgcgg gaggcatacc tgcggggcat ctcccccgcc atcatcttcg gggtgatgct
     1981 caccgagaac tcgcgcttca tctcgaacgc gacctcgaac gtgggcgccg tggggctgat
     2041 gcaggtgtat cccaaggtct ggctcaccaa ggagatgacc aggctgttcg ggaaggacct
     2101 ggcgaccgac tccaccaacg tgaagtacgg cgtcttcatc ctgaaccagt acttccggcc
     2161 gaaggaccgg aagggaaacg tgcgagagcg cgactgggcc accgccctgc tccgctacaa
     2221 cggctgcgtg aggggtacca acacgccgcg ctgccacacg tatccgagca aggtgaaggg
     2281 gttcatcgag aaccagggca agtcgatctg cagcgggcgg ggcttctacg actgcatcgc
     2341 caagccgttc atcgaggggt tcatcggcgg ctcggcggcg gatagcacgg gcaagccccc
     2401 ggcggcgccc ggcgctccaa gctcctgagt cctcgggagg cggcgagcgc gccccttccg
     2461 gatcagcctt cccgcagcgc cctcagcccc cgagcgagct cggcacggcg gtcactgccg
     2521 agctgcgcgt cgatcgagcg ctcgtgttcg gccagcaggg cgctggcgcg cccgtaggcc
     2581 gcgcggccag cgggggtgac ggtcgcgcgg atggtgcgcc ggtcccccgg atcgctctcc
     2641 cgcaccacga agccgtccgc ctcgagccga tccacgagct gcgtgacgtt ggacttgccg
     2701 cagcagtggc gttcggcgac ctgtgacagg gtgagcggct cggcggcgag gacgagatgc
     2761 cggagggccc cgagcttggc gagcgacagt cccacctcgc ccagcgcgtg ctcggcccgg
     2821 gcctccacgg cgcgggcggc gtccaggagg aggagggtga gagtgcagcc cgggacggtg
     2881 tctccgcagt cgttaaccat gcgttcaagg ctaggggagc ggctcggcat gcgtcaacct
     2941 gcccgggcgc atcccttgcc agagaggagg gcttggcgct tgcacatcgc ccggctagca
     3001 tcccgttgtc cgggctcttc cgggctcatc ccataccca
//
LOCUS       DASSYW010000173         3669 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1658056, whole genome shotgun sequence.
ACCESSION   DASSYW010000173 DASSYW010000000
VERSION     DASSYW010000173.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3669)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3669)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3669
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1658056"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(555..980)
                     /locus_tag="VFN38_02695"
     CDS             complement(555..980)
                     /locus_tag="VFN38_02695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010689.1"
                     /translation="MRTPASFYSLFTATILSVAAIAPAEAQPYVRLASNTTAPRTVTR
                     RLATYDFDSSIEGMPTRVTVADSAGTLVASFRPRGARVDQPMKVAVADRDILLEGQTV
                     RGTLTIVLYEQNDPMAAGSIIGTWTLGAYQGELRARTVR"
     gene            complement(1106..3025)
                     /locus_tag="VFN38_02700"
     CDS             complement(1106..3025)
                     /locus_tag="VFN38_02700"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HET9010690.1"
                     /translation="MTQPTPEFLDLQAALAGEYSLQRELGRGGMGIVYLARDVQLDRD
                     VAIKVLPAPLARTAESRERFVREARTAAGLSHPHIVPIHRVGQAGGFVFFVMSYVEGE
                     TLGERLRTRGPLPPADAMRVMREVAWALAYAHGRGIVHRDVKPDNILLEAGTGRALVT
                     DFGIAHVDAHDRPVTDPGKIMGTAHFMSPEQAANEPVDGRSDLYGLGVVGYLAVSGRL
                     PFDSPNLHALMLRQATEAPPSVMRAAPGLPQALATAIDKCLVRDPAGRFSDGEALAAA
                     LAPATETRPALPATLRAWLAARNPLLVPYLGWSGMFGTLLTINTALLVTGNRPDGPGD
                     VFLLAALTSLPLLPVVGYHINQARRQFRAGHTLADLRSALEIARRERAETEALSTADD
                     ETPVHRVLRLGTVGSATWFVVTGLLLTNEVIPEQGNPVFFLAPLFTTMVLGAVSNALG
                     VQFIPDGVRMWWQTGIRDRLWNSRVGEWLARRLGAPERSRAVGGGVFRATESALGVAA
                     GELFAALPKAYREQLAELPATVAALEARAADARAELDELAALGRSADADVLETRRSAA
                     SAHLTESVAALEGIRIDLLRLHAGAGDLAPLTTLIDAARALGEDMNRLADARREVDHA
                     ASSRLPAARRVATPA"
     gene            complement(3033..3611)
                     /locus_tag="VFN38_02705"
     CDS             complement(3033..3611)
                     /locus_tag="VFN38_02705"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HET9010691.1"
                     /translation="MPLVWPAPQYLTDYARALERGWSPDNLRPEAAQEELARIAEDPA
                     KFLDEQVDREAKGPAIPLPDGTMVPRLPGIHMWMWDGEFCGTIGFRWQPGTPELPPYC
                     MGHIGYAVVPWKRRMGHATQALRDILPEARAVGLPYVELTTETSNVASRRVIEANGGR
                     IVETFAKPATHGGAESLRYRIELERNVPPLRA"
BASE COUNT          561 a         1282 c         1304 g          522 t
ORIGIN      
        1 ctacagaggg cacagagggc gcagattctc caacggcaat agcaagccac agaggacgag
       61 aaccaagtct ccggagtcgc caccaaggag tttccgctcc gctacctgct ccttcgtttg
      121 gtcgactccg gagattcgga cttgcggctc catctgcccg ttctggttcg ttactagcgg
      181 accaacctct tcaccccgtc tcgcaggagc ccccggttga agttgaagat ccgcgccgtc
      241 ttcaggccgg tgagcgtgag acaggtgagc actggcctaa tctcggcacg cccgtcacgt
      301 gggcgtcaca tggccagcag acgagagggc gcagagggag catcaggacc tgcaactgca
      361 tgaaggaaca acagaggaca cagaggtccc gtacggcgcg gggcggacgc ccagcccgtc
      421 cacgaaaaga ggacgccggg ttggcgtcct ccctttccct gctggaagac ttgcgtcggg
      481 cagaggccct cggcggtgcg gatggtcgtc gggtcgtgcg ccggcccgaa tcgcaccacc
      541 cgcgggtcga cccgtcagcg caccgtgcgg gcgcgaagct cgccctgata cgcgccgagc
      601 gtccacgtgc cgatgatcga gccggccgcc atcggatcat tctgctcgta aagcacgatc
      661 gtgagcgtgc cgcggaccgt ctgcccttcc agcaggatgt cgcggtcggc cacggccacc
      721 ttcatcggct gatcgacccg cgcgccgcgg ggccggaagc tggcgacgag ggtgccggcg
      781 gagtcggcca cggtcacgcg ggtcggcatc ccttcgatcg acgagtcgaa gtcgtacgtc
      841 gcgagacggc gcgtgaccgt acgcggcgcg gtcgtgttgc tggcgaggcg gacgtacggc
      901 tgggcctcgg cgggggcgat ggcggctacg gaaagaatgg tcgccgtgaa cagcgagtag
      961 aacgacgcag gggtacgcat ggagctccgg gcatgaatga aaggagacga tcgatgtgat
     1021 ggacgatgcc cggtcagggc gccagagtcc aagacatctt ttgtctccgt ccatacccga
     1081 agggtatgat ccctccgcgg cagccctacg cgggggtcgc cacccggcgc gccgccggca
     1141 ggcgcgacga tgcagcgtga tccacctcac gccgcgcatc cgccagccgg ttcatgtcct
     1201 cgccgagcgc gcgggcggcg tcgatcagcg tggtgagcgg cgcgaggtcg cccgccccgg
     1261 cgtgcagccg cagcaggtcg atgcggatcc cctccagcgc cgccacgctc tccgtgaggt
     1321 gcgccgacgc cgcgctgcgc cgcgtctcca gcacgtcggc atcggcggac ctgccgagtg
     1381 cggcgagctc gtcgagctcc gcgcgcgcgt ccgcggcccg cgcctcgagc gccgccaccg
     1441 tggccggcag ctcggcgagc tgctcgcggt acgccttggg cagcgcggcg aacagctcac
     1501 ccgcggccac gccgagcgcg gactccgtgg cgcggaacac gccgccgccc accgcgcgcg
     1561 agcgctccgg cgcgccgagc cgacgcgcga gccactcgcc cacccggctg ttccagaggc
     1621 ggtcgcgaat gcccgtctgc caccacatgc gcacgccgtc gggaatgaac tgcacgccga
     1681 gcgcgttgct caccgcgccc agcaccatcg tggtgaacag cggcgcgagg aagaagacgg
     1741 gattcccctg ctcggggatg acctcgttgg tgagcagcag cccggtgacg acgaaccagg
     1801 tcgccgagcc gacggtgccg agccgcagca cgcgatgcac cggcgtctcg tcgtcggcgg
     1861 tcgacagcgc ctccgtctcc gcccgctcgc gccgggcgat ctcgagcgcc gagcgcaggt
     1921 cggcgagcgt gtggccggcg cggaactgcc gacgcgcctg gttgatgtgg tagccgacca
     1981 ccggcagcag cggcagcgac gtgagcgccg cgagcaggaa gacgtcgccc ggtccgtcgg
     2041 ggcgattgcc cgtcacgagc agcgcggtgt tgatcgtgag cagcgtgccg aacatccccg
     2101 accatcccag ataggggacg agcagcggat tgcgcgctgc cagccaggcg cggagcgtgg
     2161 ccggcagcgc gggtcgcgtc tcggtggccg gcgcgagtgc ggccgccagc gcttcgccgt
     2221 cggagaatcg cccggcggga tcacgcacga ggcacttgtc gatcgcggtc gccagcgcct
     2281 gcggcagtcc cggcgcggcg cgcatcacgc tcggcggcgc ctcggtggcc tggcgcagca
     2341 tcagagcgtg caggttgggc gaatcgaagg ggagccggcc gctcaccgcg agataaccga
     2401 cgacgccgag cccatagaga tcgctccgcc cgtccaccgg ctcgttcgcc gcctgctcgg
     2461 ggctcatgaa gtgcgcggta cccatgatct ttcccgggtc ggtcacgggg cgatcgtgcg
     2521 cgtccacgtg cgcgatgccg aagtccgtga cgagcgcgcg tcccgtgccc gcctcgagga
     2581 ggatgttgtc gggcttcacg tcgcggtgca cgatcccccg cccgtgcgcg tacgccagcg
     2641 cccacgcgac ctcgcgcatc acgcgcatcg cgtcggccgg cgggagcggg ccgcgcgtgc
     2701 ggagccgttc gccgagcgtc tctccctcta cataggacat gacgaagaag acgaacccgc
     2761 ccgcctgccc gacgcgatgg atggggacga tgtgcgggtg cgacagtccg gcggcggtgc
     2821 gcgcctcgcg cacgaagcgc tcgcgcgact cggccgtgcg ggccagcggc gcggggagca
     2881 ccttgatcgc cacgtcgcgg tcgagctgaa cgtcgcgcgc gaggtagacg atccccatcc
     2941 cgccacggcc gagctcgcgt tgcagcgaat actctccggc gagcgcggcc tggaggtcga
     3001 ggaattccgg ggtgggttgc gtcatgcccg tactacgcgc gaaggggtgg gacgtttcgc
     3061 tccagctcga tccggtaccg caggctctcg gccccgccgt gcgtggcggg cttggcgaag
     3121 gtctccacga ttcgtccgcc attcgcctcg atcacccgac gcgacgccac gttggaggtc
     3181 tccgtcgtca gctccacata cggcagtccc accgcccgcg cttcgggaag gatgtcgcgc
     3241 agcgcctgcg tcgcatggcc catccgccgc ttccacggga cgacggcgta gccgatgtgg
     3301 cccatgcagt acggcggcag ctccggcgtg ccgggttgcc agcggaatcc gatcgtgccg
     3361 cagaactcgc cgtcccacat ccacatgtgg atgcccggca gccgcggaac catcgtgccg
     3421 tcggggagag ggatggcggg gcctttcgcc tcgcggtcca cctgctcgtc gaggaacttc
     3481 gcgggatcct cggcgatgcg cgcgagctcc tcctgcgccg cctcggggcg gaggttgtcg
     3541 ggcgaccagc cgcgctcgag ggcacgcgca tagtcggtca ggtattgcgg cgctggccag
     3601 acgagcggca tgcggaacgt cgtcgcgttt ggggttcacc caaggtactg aatccctacg
     3661 acgacgcga
//
LOCUS       DASSYW010000174         2483 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1833998, whole genome shotgun sequence.
ACCESSION   DASSYW010000174 DASSYW010000000
VERSION     DASSYW010000174.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2483)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2483)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2483
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1833998"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1021
                     /locus_tag="VFN38_02710"
     CDS             <1..1021
                     /locus_tag="VFN38_02710"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HET9010692.1"
                     /translation="ALGNPDLKPERSTERELGFESRMFDSRLNVEATYYNNVTKDALI
                     SQPIAASSGASSTALNTAPSVTRNLGSVRNTGIEATLNAAIVDRPDFGWDITVGGSHN
                     TNKIESLGDQPCTVNTTDCLTGFKPNPTIGTGANRDSVGLPIRGVFARTYTYDDANLN
                     GIIEASEVVVDPSFSFMGYAVPRDILTIQNGFDLLRKSLRINVALDYKGGFSLLNDTV
                     RFYCLNTNTCSDATLPSTPLEDQARLVAMRYKTPSTTAGYWENGQFWRLREVGATYTM
                     PQAVASGLRARDVSLTLAARNLKVWTAYKGTDPESNYSTDNVQTDFSTLAPRTYFTAR
                     LNLHF"
     gene            1042..2427
                     /locus_tag="VFN38_02715"
     CDS             1042..2427
                     /locus_tag="VFN38_02715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010693.1"
                     /translation="MQRTYAHRLRRGGQGGALALALLTAGACSIQDSLLEQQQPQIIK
                     PGDVQNATGAVAIYNGVLGRLRTSLNGGDNNTESIWNFAGLMTDEFKVGDTFSQRIDA
                     DQRRSQDNDAVVTTLYNKVQQSRGYARDAINSLRAYAPTETTKIAEMYLVMGFMEATL
                     GQDFCNGIPLGETVNGVPQYTAPLTTEQVFTQAIARYDSALDALSGTSAPTVMVRNAA
                     LVAKARAQVALGRFAAAATTVSGIPTSYVYLITYSIPTQSNEWWQMGTATKRYTVADT
                     VDGTATFRNNLPFASANDPRVKVGRTNTKAFDGLTLFDELLNWGREDPVSLVNGLDAR
                     LIEAEAQLALRTPAGWGAMNAILNQLRAAPPKYGNLTIAPMAALSLPLTQVEAENQLF
                     REKAFWQYGRGERLSDLRRLVRQYGRGAETVYPTGSFHKSGSYGTNVSFAVPDAERSN
                     PNFTGCLDRAP"
BASE COUNT          452 a          895 c          815 g          321 t
ORIGIN      
        1 ggcgctgggc aacccggacc tcaagcccga gcgctcgacg gagcgcgagc tgggattcga
       61 gtcccggatg ttcgacagcc ggctcaacgt cgaggcgacc tactacaaca acgtcacgaa
      121 ggacgcgctc atcagccagc ccatcgccgc gtcgtcgggc gcctcgtcca ccgcgctcaa
      181 caccgctccc agcgtgacgc ggaacctcgg ctccgtgcgc aacacgggca tcgaggcgac
      241 gctgaacgcc gcgatcgtcg accgccccga cttcggctgg gacatcacgg tcggcggctc
      301 gcacaacacc aacaagatcg agtcgctggg tgaccagccc tgcacggtga acacgaccga
      361 ctgcctcacc ggcttcaagc cgaatccgac gatcggcacg ggggcgaacc gcgactcggt
      421 gggactgccc atccgcgggg tgttcgcccg gacgtacacc tacgacgacg ccaacctgaa
      481 cggcatcatc gaggcgagcg aggtcgtggt ggacccgagc ttcagcttca tgggctacgc
      541 cgtgccgcgc gacatcctca cgatccagaa cggcttcgac ctgctccgga agtcgctgcg
      601 catcaacgtg gcgctggact acaagggcgg gttcagcctg ctgaacgaca cggtgcgctt
      661 ctactgcctg aacaccaaca cctgcagcga cgcgacgctc ccctccacgc cgctggagga
      721 tcaggcgcgc ctggtggcga tgcgctacaa gaccccgagc acgacggcgg gctactggga
      781 gaacgggcag ttctggcggc tccgcgaggt gggcgcgacg tacacgatgc cccaggcggt
      841 cgccagcggc ctccgggcgc gcgacgtgtc gctcaccctg gccgcccgca acctcaaggt
      901 ctggacggct tacaagggga cggatccgga atcgaactac agcaccgaca acgtgcagac
      961 ggacttctcc acgctcgctc cgcgcacgta cttcacggcg cgcctgaatc tccacttcta
     1021 gcatccccga gggcgacact catgcagcgg acatacgcgc atcggcttcg gcggggcggc
     1081 cagggcggcg cgctggcgct cgccctgctc acggccgggg catgcagcat ccaggacagc
     1141 ctgctcgagc agcaacagcc gcagatcatc aagccgggcg acgtgcagaa cgccaccggt
     1201 gcggtggcga tctacaacgg cgtgctcggc cggctgcgca cgtcgctgaa cggcggcgac
     1261 aacaacaccg agagcatctg gaacttcgcc ggcctgatga ccgacgagtt caaggtgggc
     1321 gacaccttct cgcagcggat cgacgccgac cagcgccgca gccaggacaa cgacgcggtc
     1381 gtcacgaccc tctacaacaa ggtgcagcag tcgcgcggct acgcccgcga cgcgatcaac
     1441 tcgctccggg cgtacgcccc gaccgagacg acgaagatcg ccgagatgta cctcgtgatg
     1501 gggttcatgg aggccacgct gggccaggac ttctgcaacg gcatcccgct gggcgagacg
     1561 gtgaacggcg tcccgcagta cacggcgccg ctcaccaccg agcaggtgtt cacccaggcc
     1621 atcgcgcgct acgacagcgc gctggacgcc ctgtcgggga cgagcgcgcc cacggtgatg
     1681 gtccgcaacg ccgccctcgt cgcgaaggcg cgggcccagg tcgcgctggg ccggttcgcc
     1741 gccgcggcca ccacggtgtc ggggatcccg acgagctacg tctacctgat cacctattcg
     1801 atccccaccc agagcaacga gtggtggcag atggggaccg ccacgaagcg ctacacggtg
     1861 gccgatacgg tggacggcac cgccacgttc aggaacaacc tccccttcgc gtccgccaac
     1921 gacccgcgcg tcaaggtcgg gcgcaccaac acgaaggcgt tcgatgggct caccctgttc
     1981 gacgagctgc tgaactgggg tcgcgaggac cccgtctcgc tcgtgaacgg gctcgacgcc
     2041 cgcctgatcg aggcggaggc gcagctcgcc ctcaggacgc cggccgggtg gggggcgatg
     2101 aacgcgatcc tcaaccagct gcgggccgcg ccgccgaaat acggcaacct caccatcgcg
     2161 ccgatggccg cgctgtcgct cccgctgacg caggtggagg cggagaacca gctcttccgg
     2221 gagaaggcgt tctggcagta cggccggggc gagcggctca gcgacctgcg ccgcctggtg
     2281 cggcagtacg gccgcggcgc cgagacggtc taccccaccg gcagcttcca caagagcggg
     2341 agctacggca ccaacgtgag cttcgcggtg ccggatgccg agcggagcaa ccccaacttc
     2401 accggctgcc tcgaccgcgc cccctgagcc atccggcgga ccgtagccac gaggggggcc
     2461 cggcgggcat cgccctccgg gcc
//
LOCUS       DASSYW010000175         3394 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1561296, whole genome shotgun sequence.
ACCESSION   DASSYW010000175 DASSYW010000000
VERSION     DASSYW010000175.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3394)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3394)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3394
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1561296"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(80..511)
                     /locus_tag="VFN38_02720"
     CDS             complement(80..511)
                     /locus_tag="VFN38_02720"
                     /inference="COORDINATES: protein motif:HMM:NF013999.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-sulfur cluster assembly factor"
                     /protein_id="HET9010694.1"
                     /translation="MSTELPITPGPAHATHVAPTPQADGAERTERAAPAVAPGSGAAF
                     SDVSLEQAKLALRKVKDPDLNLNIVDLGLIYDVRVADGNVEVDMSLTSPGCPSGPEIM
                     GEAERVLKALPGVGAVTVNLVWSPFWTPDRIEPRVRAYMGL"
     gene            complement(565..1926)
                     /locus_tag="VFN38_02725"
     CDS             complement(565..1926)
                     /locus_tag="VFN38_02725"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HET9010695.1"
                     /translation="MLNLLFAAAIVSHPVPPVALDRDGLPAKAPSAVGMSAARLATIN
                     RVVERGIKAGGYPGASVVVGRKGAVVWQKGFGHLGWTSDASSVDAAETMYDLASLTKV
                     VGTTTAVMILFDEGKIKLDDNVVKYLPEFTGGGRELVTIRLLLEHRSGLPAGRDLWRI
                     AHTAEEARAAVLQTPLIAQPGQYYEYSDLGADVLGFLVESVTGQRLDQFLDARVFTPL
                     GMKDTHFRPDAALRGRIAPTELDPPRGYPLRGEVHDENAYALGGVAGHAGLFSTASDL
                     SIFAQMLLNGGTFNGTRIIADSTVTLFTKRAAGTRALGWDTCAGEFGCGKYMSANAYG
                     HTGFTGTSLWIDPDRDMFVVLLTNRVHAARARRPAKVISDVRADLADAAALAVTDMRG
                     GPLDMPRSFRADRAVGWNRPDVKVSRAKAAKARRAAAARARARAESKASARKSSAAKH
                     KRR"
     gene            2345..2956
                     /locus_tag="VFN38_02730"
     CDS             2345..2956
                     /locus_tag="VFN38_02730"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HET9010696.1"
                     /translation="MTNSSDVMENEQLTVQRAIDGDQGAMRALWTRHAPHVDVVVRRL
                     VGQDPDLAADIAQEVWIQIFRALPSFRGDAQFGTWAHRIAVNRTLNALRRTRRTAAME
                     VDVEDDSASVEPEAERAMLAASIEEAAARLSPGARTVFLLHDVEGYTHEEIAAQLGIT
                     SGGSKSQLFKARAKLRTLLAHLVDAPSTEKLRPNTTGHAAPLY"
     gene            2937..>3394
                     /locus_tag="VFN38_02735"
     CDS             2937..>3394
                     /locus_tag="VFN38_02735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010697.1"
                     /translation="MLHLSTDRLAALGDEPPTPAEAAHLATCDACSQERDAYRTLVAM
                     AKAERSALGLPLTRWDSIAAALEPAGMASSRRGASLSVRWPLQVAAGLLLMVGGAMFG
                     RASVGANPFPVGTARPAATASAAPSNAPVHSDSVFGSIDEARQAQRRSEQL"
BASE COUNT          508 a         1198 c         1185 g          503 t
ORIGIN      
        1 cgcgcgccca ggacgaagcg ggcggccgcc gaggacgcgt ccccctacag cgactgacgt
       61 cgggtgggga tgcggccgtc tacagtccca tgtaggcgcg cacgcgcggc tcgatgcgat
      121 cgggggtcca gaatggcgac cagaccaggt tcaccgtcac cgcccccaca cccggcagcg
      181 ccttcaggac ccgttcggcc tcgcccatga tctcggggcc gctcggacag cccggcgacg
      241 tcagcgacat gtccacctcg acgttgccgt cggcgacgcg cacgtcgtag atgagcccga
      301 ggtccacgat gttgaggttc aggtcggggt ccttcacctt gcgcagggcg agcttggcct
      361 gctccaggct cacgtcggag aaggcggccc cgcttcccgg cgccacggcc ggcgcggcgc
      421 gttccgtccg ctccgcgccg tcggcctgtg gcgtgggcgc cacgtgtgtg gcgtgggcgg
      481 gacctggcgt gatgggaagc tcggtggaca tggcctgcac tccggatggg gctttcggag
      541 tatcaccagc ggcagccgct gccgctagcg ccgcttgtgc ttcgccgcgc tcgacttgcg
      601 tgcgctcgcc ttgctctcgg cgcgggcccg cgcccgggcc gccgcggcgc gcctggcctt
      661 cgcggccttg gcgcgcgaga ccttcacgtc cggacggttc cagcccaccg cgcgatcggc
      721 acggaaggag cgcggcatgt cgagcggccc gccgcgcatg tccgtcaccg cgagcgccgc
      781 ggcgtcggcg aggtcggcac gcacgtcgct gatcaccttg gccggccggc gcgcacgcgc
      841 ggcatgcacc cgattggtga gcagcaccac gaacatgtcg cggtcgggat cgatccacag
      901 cgacgtgccc gtgaagcccg tgtgtccgta cgcgttcgcg ctcatgtact tcccgcagcc
      961 gaactcgccg gcgcaggtgt cccagcccag cgcgcgcgtg cccgccgcgc gcttggtgaa
     1021 cagcgtcacc gtgctgtcgg cgatgatgcg cgtgccgttg aaggtgccgc cattgagcag
     1081 catctgcgcg aagatggaca ggtcgctcgc ggtgctgaac aatcccgcgt gtccagccac
     1141 gccgcccagc gcgtacgcgt tctcgtcgtg cacctcgccg cgcagcggat agccgcgcgg
     1201 cggatcgagc tcggtcggcg cgatgcggcc gcgcagcgcg gcgtcgggac ggaagtgcgt
     1261 gtccttcatg ccgagcgggg tgaacacgcg cgcgtcgagg aactggtcga ggcgctgccc
     1321 cgtcaccgac tccaccagga agccgaggac gtcggcgccc agatcggagt attcgtagta
     1381 ctggcctggc tgcgcgatga gcggcgtctg gagcacggcc gcgcgcgcct cctcggcggt
     1441 gtgcgcgatc cgccacaggt cgcggcccgc gggcagcccc gagcggtgct cgagcagcag
     1501 ccggatggtc accaactcgc gcccgccgcc ggtgaactcg gggagatact tcacgacgtt
     1561 gtcgtcgagc ttgatcttcc cttcatcgaa caggatcatc acggccgtcg tcgtgccgac
     1621 gaccttcgtg agcgaggcga ggtcgtacat cgtctcggca gcgtccacgg agctggcgtc
     1681 cgacgtccag cccaggtggc cgaatccctt ctgccacacc acggcgccct tgcggcccac
     1741 gaccaccgaa gcgcccggat atccacccgc cttgatcccc cgctccacca cgcgattgat
     1801 cgtcgccagg cgcgcggcgg acatgcccac ggcgctggga gccttggccg gcagcccatc
     1861 gcgatcgagc gcgacgggcg gcacgggatg gctgacgatg gcggcggcga aaagcaggtt
     1921 cagcaacgcg gtgttcctcg tgatctgccc agggtggacc cggtactgca gggtacgcta
     1981 ggcaggatgc gtgctcatgt gaaaagggaa cgaccggacc tgagtaggac ggcagggccc
     2041 ggttcgcttc ataacatcat gagtcgcggt cggttcccaa cgggggagcc ggtccgggcc
     2101 cattatgtca gctgtgtcac agacgagcaa gagcttgggc tgtcacaaca taggatgggt
     2161 ccgctaaagc aggggatgac gggaagacgg gatgactgaa ggatggcgat gggcgggcat
     2221 gcaccggcca cgagtgcagc gccagggacc ccgtcatccc gtcattccgt catcccgtcc
     2281 gcccgcactg aagccttccc gtccccgagc tcgtacggtc cggcaacctt ttgtcccccc
     2341 ggccgtgaca aattcctcgg acgtcatgga gaacgaacag ctcaccgtac agcgcgccat
     2401 cgatggcgac caaggggcga tgcgggcgct gtggacgcgc catgcgccgc acgtggacgt
     2461 cgtcgtgcgc cggctcgtgg gccaggaccc cgatctcgcc gcggacatcg cccaggaggt
     2521 ctggatccag atcttccggg cgttgccgag cttccgaggc gacgcgcagt tcggcacctg
     2581 ggcgcaccgc atcgcggtga accggacgct caacgcgctg cggcgaacgc gccgcacggc
     2641 ggcgatggag gtggacgtgg aggacgacag cgcgtcggtg gagccggagg cggaacgggc
     2701 aatgctcgcg gcctcgatcg aggaagccgc ggcgcgtctg tcacccggcg cgcgcaccgt
     2761 gttcctgctc cacgacgtcg agggatacac gcacgaggag atcgccgccc agctgggcat
     2821 cacgtccggc ggctccaagt cgcaactgtt caaggcgcgc gccaaattgc gcacgttgct
     2881 cgcgcacctc gtggatgcac cgtcaaccga aaagcttcga cccaatacga ccggacatgc
     2941 tgcacctctc tactgatcgc ctcgccgcac tcggcgacga gccgccgacg ccggcggagg
     3001 cggcgcacct cgcgacgtgc gatgcgtgct cacaggagcg cgacgcctat cgcacgctcg
     3061 tcgccatggc gaaggccgag cgttcggccc tgggcctccc gctgacgcgg tgggactcca
     3121 tcgccgcggc gctggagccg gcggggatgg cgtcgtcccg acgcggcgcc agcctgtccg
     3181 tgcgctggcc gcttcaggtc gccgccggac tgctgctcat ggttggcggt gcgatgttcg
     3241 gccgcgcaag cgtcggcgcg aacccgttcc ccgtgggcac cgcccgtccg gccgccaccg
     3301 cgagcgccgc cccgtcgaac gctcccgtcc acagcgactc ggtgttcggg tcgatcgacg
     3361 aggcgcgcca ggcgcagcga cgctccgagc agct
//
LOCUS       DASSYW010000176         2110 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1168279, whole genome shotgun sequence.
ACCESSION   DASSYW010000176 DASSYW010000000
VERSION     DASSYW010000176.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2110)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2110)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2110
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1168279"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..785
                     /locus_tag="VFN38_02740"
     CDS             <1..785
                     /locus_tag="VFN38_02740"
                     /inference="COORDINATES: protein motif:HMM:NF018290.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HET9010698.1"
                     /translation="TARVVVGTVLAVVSQKGGVGKTTTAINVASALAQRGRKTLLVDV
                     DPQGAVRHGMGLAADAGVAGLADLLAGTHELQDVVQATPLPWLRVLLAGSVSEAAEHE
                     SYATQLSESPRLGELFDRARERGYIVVVDAPPGLGAVTRRVLAHSQHVLVPLQCEPLA
                     LQTTTQILRAVREAAIANPGLVLDGILLTMLEEGNEVSQRVAAYVREQLPPELLFDVA
                     IPRTMASIDAFAAGQPIVLRSPEDPAAVAYLRLAELLEPRLR"
     gene            782..1570
                     /locus_tag="VFN38_02745"
     CDS             782..1570
                     /locus_tag="VFN38_02745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010699.1"
                     /translation="MSRRPPFLALAAVVVAGAVALSCGDVPTLENGIAYVTPIQLPLP
                     TVAAGDTLRDSLGFAAPLRVRAFTRDSQEITGLAVTFLATTRPLDDVQILENGLLVAR
                     DTLRSVTLVARIGDRIQTPVATLTIVPEPLEISRPAGDEVGDTAMALPALKALRATVS
                     GIYRGQSTPVNGIIVRYRIDSLRPSTAPPGSAILTNASGTPLRPDSTIAVDTTKSAGL
                     ATRNVLVVAGSGVSRVFISASARRLRGGAPLAGSPVRFVLDVKP"
     gene            1671..>2110
                     /locus_tag="VFN38_02750"
     CDS             1671..>2110
                     /locus_tag="VFN38_02750"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HET9010700.1"
                     /translation="MIASGGPRNTAPGTLTQLFFDAVEKHDKPDALQYKVNGVYKPIS
                     SRALAERVRRAGFGLAELGVAPGDRVGILSENRPEWAIADYACLTTSLADVPIYPNLP
                     AEQAGYILHDAGVVALFVSDAAQAAKIAEVRGNLPTLRHVITFAA"
BASE COUNT          281 a          789 c          758 g          282 t
ORIGIN      
        1 gaacagcccg agtcgtagtg gggaccgtcc tcgccgtcgt gagccagaag ggaggcgtgg
       61 gaaagacgac gaccgcgatc aacgtggcga gcgcgctggc gcagcgcggc cgcaagacgc
      121 tgctcgtgga cgtcgacccg cagggcgcgg tgcgccacgg catggggctc gccgccgacg
      181 ccggcgtcgc cggcctggcc gacctcctcg ccggcacgca cgagctgcag gacgtcgtgc
      241 aggcgacgcc cctgccctgg ctgcgcgtgc tgctggccgg ctcggtgagc gaagcggcgg
      301 agcacgagag ctatgcgacg cagctctcgg agtcgccgcg gctgggcgag ctgttcgacc
      361 gggcgcggga gcggggctac atcgtcgtcg tggacgcgcc gccgggcctg ggggccgtga
      421 cgcggcgcgt gctggcgcac agccagcacg tcctggtccc gctccagtgc gagccgctcg
      481 cgctccagac gacgacgcag atcctgcgcg ccgtgcgcga ggccgccatc gcgaacccgg
      541 ggctggtgct cgacggcatc ctgctcacga tgctcgagga gggcaacgag gtgtcacagc
      601 gcgtcgcggc atacgtgcgc gagcagcttc cccccgagct gctgttcgac gtcgccatcc
      661 cccgcacgat ggcgtccatc gacgccttcg ccgccggcca gccgatcgtg ctccgctcgc
      721 cggaggatcc ggcggcggtg gcgtacctgc gcctggccga gctgctggag ccgaggctgc
      781 gatgagccgg cgtccgccat tcctcgccct tgccgccgtg gtggtcgccg gcgccgtcgc
      841 gctgtcgtgc ggcgacgtgc cgacgctgga gaacgggatc gcctacgtca ccccgatcca
      901 gctcccgctg ccgacggtgg ccgcggggga cacgctgcgg gacagcctgg gcttcgccgc
      961 gccgctgcgg gtgcgcgcct tcacgcgcga ttcgcaggag atcaccgggc tcgccgtgac
     1021 cttcctcgcc acgacgcggc cgctggacga cgtgcagatc ctcgagaacg ggctgctcgt
     1081 cgcgcgggac acgctgcgca gcgtgaccct ggtggcgcgc atcggcgacc gcatccagac
     1141 gcccgtcgcg acgctgacga tcgtgcccga gccgctcgag atcagccggc cggcgggcga
     1201 cgaggtcggc gacaccgcga tggcgctgcc cgcgctcaag gcgctccgcg cgacggtgtc
     1261 cggcatctac cgcggccaga gcacgccggt gaacggcatc atcgtccgct accggatcga
     1321 cagcctgcgc ccctccacgg ctccgccggg cagcgcgatc ctcaccaacg ccagcggcac
     1381 gccgctgcgc cccgattcga cgatcgccgt ggacaccacc aagtcggcgg ggctcgccac
     1441 ccgcaacgtg ctcgtcgtgg cggggagtgg ggtcagccgg gtcttcatca gcgcgtccgc
     1501 ccgccgcctc cgggggggcg cgcccctggc gggaagtccc gtgcgcttcg tgctcgacgt
     1561 caagccgtag cacgcgcgcc actggtggcg ttccccccgc cccgcatcgt atactcggct
     1621 gagcacgcgg tccgcgccgt cgcggccgct tccacaagtc ggaggtcccg atgatcgcat
     1681 ccggtggtcc gcgcaacacg gcgcccggca ctctcaccca gctgttcttc gacgcggtcg
     1741 agaagcacga caagccggac gcgctgcagt acaaggtgaa cggcgtgtac aagccgatct
     1801 ccagccgcgc cctcgccgag cgggtgcgcc gcgcgggctt cggcctggcc gagctgggcg
     1861 tcgcaccggg cgatcgcgtc ggcatcctgt cggagaaccg ccccgagtgg gcgatcgccg
     1921 actacgcctg cctcaccacg tcgctcgccg acgtgccgat ctacccgaac ctccccgcgg
     1981 agcaggcggg gtacatcctc cacgacgcgg gggtggtggc gctgttcgtg agcgatgccg
     2041 cgcaggcggc gaagatcgcc gaggtgcggg ggaacctccc gacgctgcgc cacgtgatca
     2101 ccttcgccgc
//
LOCUS       DASSYW010000177         2726 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_230721, whole genome shotgun sequence.
ACCESSION   DASSYW010000177 DASSYW010000000
VERSION     DASSYW010000177.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2726)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2726)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2726
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_230721"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2623)
                     /locus_tag="VFN38_02755"
     CDS             complement(<1..2623)
                     /locus_tag="VFN38_02755"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: protein motif:HMM:NF020083.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HET9010701.1"
                     /translation="MTPAASADPLADFHPLVRRWFAETLGDPSAPQRAGWPAIARGED
                     TLILAPTGTGKTLAAFLWELNALITEGLEAPLANAVHLLYISPLKALNNDVHRNLETP
                     LGQLRERFEQAGEKFPEIRVAVRTGDTPSSARAKMLRKTPHILITTPESLHILLTSVR
                     GRTMFSALRAVIVDEIHAVAGTKRGAHLALTLERLAQLAPDAPQRIGLSATQRPLEEI
                     ARFLAGCEPQRALVPGRNADSADLADAADEKPRKRKSAKSVTSATAVAFRPVQIVDCG
                     LVKRMETSVVSPVDDLANVGGTIWTSVAPLVLDHIRGARTTLVFVNNRAQAERMAARV
                     NQLAEEEIALPYHGSLSRERRFLLEERLKAGELRALVTTSSLELGIDVGSVDLVIQLQ
                     SPKRVAAALQRVGRAGHSLDATSRGVFIPTFRDDALEQLAILDAMRTGDVEPTKVVQN
                     ALDVLAQLVVAIVASDLPEWTSAGLFDFVRRAYPYHSLTRAAFDEVLGMLSGKYPSDV
                     AAELDARIHWDRITDLLTPTRGARMVATISGGTIPDRGLYTVNLADKTRLGELDEEFV
                     HESRVGDAFQLGSSTWRIRAIEHDRVIVVPAPGAPARMPFWHGEFMARSSHLTSRVGA
                     LRRELDDARTLVDLAEIQKTHHADEPTVRSLVEYVQAQRAITRIVPDETHLVLEHFRD
                     EVGSVRMVLHAPFGGRVNAPWGMALGRRMREQLGIDAQVQTTDDGLMLRLPDMGAAPP
                     VEAIRTLTVEEAERLVLEEVGASSLFGARFRMNAARALLLPRGNPRRRMPLWLQRLKS
                     LDLLQAVRGYPSFPILVETYRDVLQDAFDMRALRDVLERIASGAITIRTVQTEIPSPF
                     AASLQFGFVIDHMYGKDA"
BASE COUNT          421 a          964 c          925 g          416 t
ORIGIN      
        1 gcgcatcctt cccgtacatg tggtcgatca cgaacccgaa ctggagcgac gccgcgaagg
       61 gcgacgggat ctccgtctgc accgtgcgga tcgtgatcgc ccccgacgcg atgcgctcca
      121 gcacgtcgcg cagcgcccgc atgtcgaacg catcctgcag cacgtcgcga taggtctcga
      181 cgagaatcgg gaacgacgga tagccccgca ccgcctgcag caggtcgagc gacttgagac
      241 gctgcagcca gaggggcatg cgccgccgtg gattcccgcg cggcagcaat agcgcgcgtg
      301 cggcgttcat gcggaagcgc gccccgaaca gcgacgacgc tcccacttcc tcgagtacga
      361 gccgctccgc ctcctccacc gtcaacgtgc ggatcgcctc caccggcggc gcggcgccca
      421 tgtcggggag gcgcaacatc agtccgtcgt cggtcgtctg cacctgcgcg tcgatgccga
      481 gctgctcccg catccgtcgg ccgagcgcca tcccccatgg tgcgttgacc cgtccgccga
      541 acggcgcgtg cagcaccatg cgcaccgagc ccacctcgtc gcggaaatgc tcgagcacga
      601 gatgcgtctc gtcgggaacg atgcgcgtga tggcacgctg cgcctgcacg tactccacga
      661 gcgatcgcac cgtcggctcg tcggcgtggt gcgtcttctg gatctctgcg agatccacga
      721 gcgtgcgcgc atcgtcgagc tcgcgacgca acgctcccac gcgagaggtg agatggctcg
      781 accgcgccat gaactcgccg tgccagaagg gcatccgcgc cggcgcaccg ggtgccggca
      841 cgacgatcac gcgatcgtgc tcgatcgcgc ggatcctcca ggtgctggag ccgagctgga
      901 aggcgtcgcc gacgcgcgac tcgtgcacga actcctcgtc cagctcgccg agccgcgtct
      961 tgtcggcgag gttcaccgtg tagagcccgc ggtcggggat cgtgccaccg gagatcgtcg
     1021 ccaccatccg cgcgccgcgc gtcggcgtga gcaggtcggt gatccggtcc cagtggatgc
     1081 gggcatccag ctccgcggcg acgtcgctcg gatatttccc cgagagcatg ccgagcactt
     1141 cgtcgaacgc cgcgcgcgtg agactgtggt aggggtaggc gcggcgtacg aaatcgaaca
     1201 agcccgcgct cgtccactcc ggcaggtcgc tcgccacgat cgcgaccacg agctgcgcga
     1261 gcacgtcgag cgcgttctgc accaccttcg tcggctccac gtcgccggtg cgcatcgcgt
     1321 cgaggatcgc cagctgctcc agcgcatcgt cccggaacgt ggggatgaac actcctcggc
     1381 tcgtcgcgtc gagcgagtgg ccggcgcgcc caacgcgctg gagcgccgcc gccacgcgct
     1441 tggggctctg gagctggatc acgagatcca ccgaccccac gtcgatcccc agctcgaggg
     1501 agctggtggt gacgagcgcg cgcagctcgc ccgccttgag ccgctcctcg agcaggaagc
     1561 gccgctcgcg cgacagcgag ccgtgatacg gcagcgcgat ctcctcctcc gcgagctggt
     1621 tcacccgcgc cgccatccgc tccgcctgcg cgcggttgtt cacgaacacc agcgtcgtcc
     1681 gcgccccgcg gatgtggtcg agcaccagcg gcgcgaccga cgtccagatc gtcccgccga
     1741 cgttcgccag gtcgtcgacg ggcgagacga cgctcgtttc catgcgcttc acgagcccgc
     1801 aatccacgat ctggaccggg cgaaaagcga cggcggtcgc agatgtcact gatttcgcag
     1861 atttcctttt tcttggcttt tcatctgcgg catctgcgag atctgcggaa tctgcgttcc
     1921 gcccaggcac cagggctcgt tgcggttcgc agccagccag aaaacgcgca atctcctcga
     1981 gcggccgctg ggttgccgag aggccgatgc gctgcggcgc gtcgggcgcg agttgcgcga
     2041 gccgctcgag cgtgagcgcc aggtgcgcgc cgcgcttcgt gcccgctacg gcgtggatct
     2101 cgtccacgat cacggcgcgc agcgcgctga acatcgtccg gccgcgcacg ctcgtgagca
     2161 ggatgtgcag agactccggc gtcgtgatca gaatgtgcgg cgtcttgcgc agcatcttcg
     2221 cgcgcgcgct cgacggcgtg tcgccagtgc gcaccgccac gcggatctcc gggaacttct
     2281 cccccgcctg ctcgaaccgc tccctgagct ggccgagcgg cgtctcgagg ttgcggtgga
     2341 cgtcgttgtt gagcgccttg agcggcgaga tgtagagcag gtgcaccgcg ttcgcgagcg
     2401 gcgcctcgag accctcggtg atcagggcat tcagctccca caggaaggcg gcgagcgtct
     2461 tccccgtgcc cgtcggggcg aggatgagcg tgtcctcccc gcgcgcgatc gccggccagc
     2521 ccgcacgctg cggcgccgag ggatcaccga gggtctcggc gaaccagcgg cggacgagag
     2581 gatggaagtc ggcgagggga tcggcggagg cggcgggcgt catcgccccg caacgttgcg
     2641 atatccgtgc gcgcggcggg aggtccggaa ccgaccgaat gcaccgaaac ggcgagacgg
     2701 aacgagcgga tcacccgtcg gtgatc
//
LOCUS       DASSYW010000178         2560 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_792345, whole genome shotgun sequence.
ACCESSION   DASSYW010000178 DASSYW010000000
VERSION     DASSYW010000178.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2560)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2560)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2560
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_792345"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            100..897
                     /locus_tag="VFN38_02760"
     CDS             100..897
                     /locus_tag="VFN38_02760"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HET9010702.1"
                     /translation="MDLTGKTALVTGANRGIGRAIAEELAARPLATVLAGVRSPESFE
                     PVDPPPGGAAAVRPVQMDLSSRETIDAACDALGDELGEIDLLVNNAGLMTGGLLEEQD
                     MDEVYAMFQVNLLAVAHLTHRVLPGLLAKGAGKVVNNASISGFAYFPAATTYAASKAG
                     VVALTQSLRRELRGTGVSTLLLVTPGVETDMLDATEDVYGRHMDTSGWDKMPAAEWAA
                     KVVQAIESDAGELGPGGKTGLAKLASHGPGWLLDAASSRMFSRRPRR"
     gene            complement(875..2119)
                     /locus_tag="VFN38_02765"
     CDS             complement(875..2119)
                     /locus_tag="VFN38_02765"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014414.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclopropane-fatty-acyl-phospholipid synthase
                     family protein"
                     /protein_id="HET9010703.1"
                     /translation="MIDRIARRIAHAFLARIHTGRLTVVEDGETVVFGAGPPTATVYV
                     HSPRVWRRLMRGSRGLAESYLDGMWTTPDLTAVVRVAARNVDGIDRLRRRLAPVRAPI
                     QRAAALVRPNTRRRSRRAIAEHYDLGNDLFELMLDPTMMYSSALFDRPGMTLEEASTA
                     KLERICEKLALGPDDHVLAIGTGWGGFAVHAASTRGCRVTTTTISREQHDYAVESVRR
                     AGLEHRVTVLLDDYPDHQGRYDKLVSIEMIEAVGWRHFGTFFDTCSRLLEPDGLMMLQ
                     AILIDDRAYEVEKAGKSFINTYVFPDGCLPSMEVITRSVARRTDMQTLDVRDLTPDYA
                     ETLRRWSASFLQNAERAAALGYDERFKRLWTLYLSYCEAGFAERRITGAQVLFAKPQH
                     RSTLPAGLGRAAIGMSSVADAG"
     gene            complement(2116..>2560)
                     /locus_tag="VFN38_02770"
     CDS             complement(2116..>2560)
                     /locus_tag="VFN38_02770"
                     /inference="COORDINATES: protein motif:HMM:NF018770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF1365 domain-containing protein"
                     /protein_id="HET9010704.1"
                     /translation="VSFYFCLDEAGERLESVVAEVTNTPWGERHAYVVSRERGAAGPV
                     LTGSSEKVLHVSPFMGMDHRYEWRAAAPGETASVHIESHRDGGLAFDATLSLRRQPLT
                     RRSLARITARYPFATLRVLALIYAHALGLKLKGARVHPHPKASSA"
BASE COUNT          352 a          904 c          951 g          353 t
ORIGIN      
        1 gaccgcgatg gcggcttggc gggggcgtga cacgagacgt ctacgcggcg cgcggccggg
       61 ttggatcatc cgccggccga gccgctgcgt actgatgtga tggacctcac cggcaagacc
      121 gcgctcgtga ccggcgccaa ccgcggcatc ggccgcgcga tcgcagagga gctggccgcc
      181 cgcccgctcg ccaccgtgct ggccggcgtc cggtcgcccg agagcttcga gcccgtcgac
      241 ccgccgccgg gcggcgccgc cgcggtgcgc ccggtgcaga tggacctctc ctcgcgggag
      301 acgatcgacg ccgcctgcga cgcgctcggg gacgagctcg gcgagatcga cctgctcgtg
      361 aacaacgccg ggctgatgac cggcggcctg ctcgaggagc aggacatgga cgaggtgtac
      421 gcgatgttcc aggtgaacct cctggccgtg gcgcacctca cccaccgcgt gctgcccggc
      481 ctgctcgcga agggcgccgg caaggtggtg aacaacgcgt cgatcagcgg cttcgcctac
      541 ttccccgccg ccaccaccta cgcggcgtcg aaggccggcg tcgtggccct cacccagtcg
      601 ctccggcgcg agctgcgcgg caccggcgtg agcacgctgc tgctcgtcac gccgggcgtc
      661 gagaccgaca tgctcgacgc caccgaggac gtgtacggcc gccacatgga cacctccggc
      721 tgggacaaga tgccggccgc cgagtgggcg gcgaaggtgg tgcaggcgat cgagtcggac
      781 gccggcgagc tcggcccggg cggcaagacc ggcctcgcga agctcgcctc gcacggcccc
      841 ggctggctgc tcgacgccgc gtcgtcgcgg atgttcagcc ggcgtccgcg acgctagaca
      901 tgccgatcgc ggcgcggccg agcccggccg gcagcgtgga gcggtgctgc ggcttggcga
      961 acagaacctg cgcgccagtg atgcgacgct cggcgaagcc cgcctcgcag tagctcaggt
     1021 agagcgtcca gagccgcttg aagcgctcgt cgtagcccag cgcggcggcg cgctcggcgt
     1081 tctggaggaa gctcgcgctc cagcggcgga gcgtctcggc gtagtcgggt gtgaggtcgc
     1141 gcacgtcgag cgtctgcatg tcggtgcggc gcgccacgct gcgcgtgatc acctccatcg
     1201 acggcaggca gccgtcgggg aacacgtagg tgttgatgaa gctcttgccc gccttctcca
     1261 cctcgtaggc ccggtcgtcg atcaggatcg cctggagcat catcagcccg tccggctcga
     1321 gcagccgcga gcaggtgtcg aagaaggtgc cgaagtggcg ccagcccacc gcctcgatca
     1381 tctcgatcga gacgagcttg tcgtagcggc cctggtggtc ggggtagtcg tcgagcagca
     1441 ccgtcacgcg gtgctcgagc ccggcgcgtc gcaccgactc gaccgcgtag tcgtgctgct
     1501 cgcgcgagat cgtggtggtg gtgacgcggc agccgcgcgt gctcgccgcg tgcacggcga
     1561 agccgcccca gccggtgccg atcgcgagca cgtgatcgtc gggcccgagc gcgagcttct
     1621 cgcagatccg ctcgagcttc gcggtggagg cctcctcgag cgtcatcccc gggcggtcga
     1681 acagcgcgct cgagtacatc atcgtcgggt cgagcatcag ctcgaagagg tcgttgccga
     1741 ggtcgtagtg ctcggcgatg gcgcgccggc tgcggcggcg cgtgttgggc cggacgagcg
     1801 ccgccgcgcg ctggatcggg gcgcgcaccg gcgcgagccg ccggcgcagc ctgtcgatcc
     1861 cgtccacgtt gcgggcggcc acgcggacca cggcggtgag gtcgggcgtg gtccacatgc
     1921 cgtcgaggta cgactccgcc aggccgcggc tgcctcgcat cagcctgcgc cacacgcgcg
     1981 gcgagtgcac gtacacggtg gccgtaggcg gcccggcgcc gaacaccacg gtctcgccgt
     2041 cctcgacgac ggtcagccgg ccggtgtgga tgcgggcgag gaacgcgtgg gcgatgcggc
     2101 gcgcgatgcg gtcgatcatg ccgagctcgc cttggggtgc gggtgcacgc gcgcgccctt
     2161 cagcttcagg ccgagcgcgt gcgcgtagat cagcgcgagc acgcgcaggg tggcaaacgg
     2221 gtagcgcgcg gtgatgcggg cgagcgaccg gcgcgtgagc ggctgccggc ggagcgacag
     2281 cgtggcgtcg aacgcgagcc cgccgtcgcg atggctctcg atgtgcacgg acgctgtctc
     2341 gcccggcgcc gccgcgcgcc actcgtagcg gtggtccatg cccatgaacg gcgacacgtg
     2401 gagcaccttc tccgagctgc ccgtgagcac cgggccggcg gctcctcgct cacggctcac
     2461 cacgtaggca tggcgctcgc cccagggcgt gttcgtcacc tcggccacca cggactcgag
     2521 ccgctcgccg gcctcgtcga ggcagaagta gaagctcacc
//
LOCUS       DASSYW010000179         3386 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_527455, whole genome shotgun sequence.
ACCESSION   DASSYW010000179 DASSYW010000000
VERSION     DASSYW010000179.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3386)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3386)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3386
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_527455"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..602
                     /locus_tag="VFN38_02775"
     CDS             <1..602
                     /locus_tag="VFN38_02775"
                     /EC_number="2.4.99.-"
                     /inference="COORDINATES: protein motif:HMM:NF013915.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA];
                     GO_process: GO:0042158 - lipoprotein biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase family
                     protein"
                     /protein_id="HET9010705.1"
                     /translation="LDRGGFVYWGGFIGGALAVMGVVLHKRAGLAKMADVSAPALAGA
                     YAIGRTGCWAIGDDYGRPWNGFLSVAFPDGAPPSTAGIMARDFGVSVPAGVTPSTVLS
                     VYPTQLAEVAMGLAIFGLLWRWRDHEHAEGWLFGVYCVLMGVERFLIEFLRAKDDRFV
                     AGLTYAQVIAVGFMVLGAAIIAWRWRVGEGKSGIYAVGA"
     gene            624..1178
                     /locus_tag="VFN38_02780"
     CDS             624..1178
                     /locus_tag="VFN38_02780"
                     /inference="COORDINATES: protein motif:HMM:NF013989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HET9010706.1"
                     /translation="MTTTTRRKVIVHIATSADGYIARPDGDIEWLTSRPAPKGFYGMN
                     AFMRTIDTEVLGRKTYDAALALGGKFDTKTRHVVFTRRPPPADAPPGVEFVDEPIAPF
                     VSRLRASPGKDIWLMGGGELIASFLDAQAVDEFVISVVPVFIGDGIPLIARRHRHVAL
                     DLRSVERFDDGLVQLHYEVCRPIA"
     gene            1239..1607
                     /locus_tag="VFN38_02785"
     CDS             1239..1607
                     /locus_tag="VFN38_02785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010707.1"
                     /translation="MDVNGWPRRLLIVGLAALIVGTLDPLEGSLLILAAAALLALAGY
                     AGHFTARRQLAWALALVALGVGTLWSLSAVGGFGGRTGRSSWWALLLLPYPIGWLLAL
                     SGALRSLGIAGRGGRPRLAR"
     gene            1667..1918
                     /locus_tag="VFN38_02790"
     CDS             1667..1918
                     /locus_tag="VFN38_02790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010708.1"
                     /translation="MAKCEVCGNDYAMAFQVVTAGVTHTFDSFECAIHKLAPICAHCG
                     CKIVGHGIEANNTFYCCAHCAHAKGAKSIVDNAAHAAKK"
     gene            1915..2397
                     /locus_tag="VFN38_02795"
     CDS             1915..2397
                     /locus_tag="VFN38_02795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010709.1"
                     /translation="MTRALPRVDVVVEPDTLARDARGSITGRVWLRDGSPESQADFPE
                     VGWSDFPVTLLSAWSAELQRLARTVPANGTFARCRFMDGPYSFTVRAEQAGAWRIACM
                     EERTEGEHAVGPSWLTDQAAFLDSVHRAARSVLFHCDTRGWWDDETEALRRRVETGAS
                     "
     gene            2422..3369
                     /locus_tag="VFN38_02800"
     CDS             2422..3369
                     /locus_tag="VFN38_02800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010710.1"
                     /translation="MTCVVTPIVRRTFAVALVVLGAIARPGAAQQPAATQNPSPMAES
                     TRRHERLVQTALRGTVRSFTGPAGKPVELLVPQRATSRGVMDLVVHFHGATWVPEQAV
                     ASLGRNVATAVVNVGSGSGVYDRAFADPSAFDSLLSAVTRESSAALAAPVRLGRITLV
                     GFSAGHGAVRAILREPRHFARVSAVLLLDGMHTSYVPDGTVLAAGGALDTMNLVAFAA
                     FARAAMRGEKRFLVTHSEIFPGTFASTTETADWLLHALALRRTPVLRWGPRGMQQLSE
                     ARAGRFELRGYAGNSAPDHIDQLHAMPELLARLLANQDR"
BASE COUNT          471 a         1154 c         1215 g          546 t
ORIGIN      
        1 tcctcgatcg cggcggcttc gtgtactggg gcggcttcat cggcggcgcg ctcgcggtga
       61 tgggcgtggt gctgcacaag cgagccggcc tcgcgaagat ggccgacgtg tcggcgccgg
      121 cgctggcggg cgcgtacgcg atcggccgca ccggctgctg ggcgatcggc gacgactacg
      181 gccggccgtg gaacggattt ctttccgtcg ccttccccga cggcgcgccg cccagcaccg
      241 cggggatcat ggcgcgcgac ttcggggtca gcgtgccggc gggtgtaacg ccgtcgaccg
      301 tgctgtcggt gtatccgacg cagctcgccg aggtggcgat ggggctcgcg atcttcggcc
      361 tgttgtggcg ctggcgcgat cacgagcatg ccgaagggtg gctgttcggc gtgtactgcg
      421 tgctgatggg tgtggagcgg ttcctgatcg agttcctgcg cgccaaggac gaccggttcg
      481 tggcggggct gacctatgca caggtcatcg cggtgggatt catggtgctc ggcgcggcga
      541 tcatcgcgtg gcgctggcgt gtaggtgagg gaaagtcggg gatctacgcg gtcggggcgt
      601 aggcaacaag cgaggcagat gaagtgacca cgacgacgcg ccggaaggtc atcgtccaca
      661 tcgcgaccag cgcggacggc tacatcgcgc ggcccgacgg cgacatcgag tggctcacct
      721 cgcgccccgc gccgaagggg ttctacggca tgaacgcctt catgcggacg atcgacaccg
      781 aagtgctcgg ccggaagacc tacgacgccg cgctcgcgct gggggggaag ttcgacacga
      841 agacgcgtca cgtcgtattc acgcgacgcc cgccgccggc cgacgccccg ccgggcgtcg
      901 agttcgtgga cgaaccaatc gcgccgttcg tgagccggct tcgcgcaagc cccggcaagg
      961 acatctggct gatgggcggc ggcgagctca tcgcctcgtt tctcgacgcg caggcggtcg
     1021 acgagttcgt catcagcgtc gtcccggtct tcatcggcga tggcattccg ctgatcgcac
     1081 ggcgtcatcg gcacgtcgcc ctcgacctgc gctccgtcga gcggttcgac gacggcctgg
     1141 tgcagctgca ctacgaggtg tgtcggccca ttgcctgaca gcgcccgggg cgtccgccgt
     1201 gcagcctgga agcagggacc gtcaccggga ggttcgcgat ggacgtcaac ggttggcctc
     1261 ggcggctgct catcgtcggt ctcgcggcgc tgatcgtcgg gacgctggac ccgctggaag
     1321 ggtcgctcct catactcgcc gcggccgcgc tgctcgcgct cgcggggtac gcgggccact
     1381 ttacggcgcg ccgccagctc gcatgggcgt tggcactggt ggcgctcggc gtcgggacgc
     1441 tgtggagcct cagcgcggtc ggcggcttcg gcgggaggac gggacgctcc agctggtggg
     1501 cgctgctgct gctcccgtat cccatcggat ggctgctggc gctgagcggt gcactgcgca
     1561 gcctggggat cgccggacgt ggcggacgcc cccgattggc gagatgatca gggcgtcggg
     1621 cacgaccctt gttgaggatt ccggactatc cctgccagga ggcgatatgg cgaagtgcga
     1681 agtgtgcggc aacgactatg cgatggcctt ccaggtcgtg acggcggggg tcacgcatac
     1741 gttcgacagc ttcgaatgcg cgatccacaa gctggccccg atctgcgcgc actgcggctg
     1801 caagatcgtc ggccacggca tcgaggcgaa caacacgttc tactgctgcg cgcactgcgc
     1861 gcacgccaag ggcgcgaaga gcatcgtcga caacgccgcg cacgccgcga agaagtgacg
     1921 cgggcgcttc cccgcgtcga cgtggtggtg gagccggaca cgctcgcgcg cgacgcacgc
     1981 ggctccatca ccgggcgcgt gtggctgcgc gacggaagcc cggaatcaca ggcggacttt
     2041 ccggaggtcg gctggtccga tttcccggtg acgctgctca gtgcgtggag cgccgagctc
     2101 cagcgcctgg cgcgaaccgt gcccgcgaac gggaccttcg cgcgatgccg tttcatggac
     2161 ggtccgtact cgttcaccgt gcgcgccgag caggcggggg cgtggcggat cgcctgcatg
     2221 gaagagcgca ccgagggcga gcacgccgtc ggccccagct ggctcaccga tcaggccgca
     2281 tttctcgaca gcgtgcatcg cgcggcgcgc agcgtgttgt tccactgtga cacgcgcggc
     2341 tggtgggacg acgagaccga agcgctgcgc cggcgcgtcg agacgggcgc gagctagcag
     2401 gccaccatca tcccgagctc catgacctgt gtcgtcacgc cgatcgtacg tcgaacattc
     2461 gccgtcgcgc tggtggtgct cggcgccatc gcgcggcccg gtgccgccca gcagccggcg
     2521 gcgacgcaga atccctcgcc catggccgag tcgacgcgcc gccacgagcg actcgtgcag
     2581 acggcgcttc gcggaacggt gcgctcgttc accggaccgg cgggcaagcc cgtcgagctc
     2641 ctcgtgcccc agcgcgcgac gtcgcgcggc gtcatggatc tcgtcgtgca tttccacggc
     2701 gcgacctggg tgccggagca ggcggtcgcg tcgctcggac ggaacgtcgc gacagccgtc
     2761 gtgaacgtcg gatcgggatc cggcgtgtac gaccgcgcct tcgccgatcc gtcggccttc
     2821 gattccctcc tctccgccgt gacgcgcgag tcgtccgcgg cccttgccgc accggtacga
     2881 ctcgggcgga tcaccctcgt cggcttttcg gccggacatg gcgcggtgcg ggcgatcctc
     2941 cgcgagccgc gtcacttcgc ccgggtgtcg gcggtgctgc tgctcgacgg catgcacacg
     3001 tcctacgtcc ccgacggtac cgtactcgcg gccgggggcg cgctcgacac gatgaatctc
     3061 gtggccttcg cggccttcgc ccgcgccgcg atgcgtggag agaagcggtt cctcgtcacc
     3121 cactcggaga tctttcccgg caccttcgcc agcacgaccg agacggctga ctggctgctg
     3181 cacgcgctcg cgcttcgacg cacccccgtg ctgcgctggg ggccgcgcgg catgcagcag
     3241 ctcagcgaag ctcgcgccgg ccgcttcgag ctccgcggct atgccggcaa ctccgcgccg
     3301 gaccacatcg atcagctgca cgcgatgccc gagctgctcg cgcggctgct cgcgaaccag
     3361 gaccgctgat catgcaattc gacctc
//
LOCUS       DASSYW010000180         2046 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1017433, whole genome shotgun sequence.
ACCESSION   DASSYW010000180 DASSYW010000000
VERSION     DASSYW010000180.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2046)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2046)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2046
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1017433"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..322
                     /locus_tag="VFN38_02805"
     CDS             <1..322
                     /locus_tag="VFN38_02805"
                     /inference="COORDINATES: protein motif:HMM:NF012422.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HET9010711.1"
                     /translation="ELLQAIRVAASGGQYLDSTLTPRVTAGFLAREGKRVGRAGATIS
                     ERESGVLRLIASGYSNKEIAARLDLSVKTVEAHKANAMRKLGLTGRIDIVKYAILQGW
                     LDNA"
     gene            468..932
                     /locus_tag="VFN38_02810"
     CDS             468..932
                     /locus_tag="VFN38_02810"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010712.1"
                     /translation="MEGSSQIAYGGRRALPLDCGTQLPDHWRLARAAHVDLLLMGMPR
                     VNLLLVAPDGVVRYVLESLLLDLREPIVRWSPGNVLDLSSVDHASTIILHDVGNLPPR
                     DQLGLLEWLEHADGRAQVVSTSATPLLSRVQGGAFVDTLYYRLNTVCVDVTA"
     gene            1018..1716
                     /locus_tag="VFN38_02815"
     CDS             1018..1716
                     /locus_tag="VFN38_02815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HET9010713.1"
                     /translation="MRILLVEDEPRAAQMLAKGLREQAYAVDVVGDGAEALYQASITD
                     YDAVILDVMLPVRDGVSVCRQLRREGSTTPVLMLTARDAVDARIEGLDSGADDYLTKP
                     YDFGELLARLRAVIRRGQRPLTPSEISVGPVTIDTRARRAYRNGHPVTLTAREYALLE
                     HLMLHADEVVGRAAIAEHVWDAQYEAMSNVIDVCIQRLRRKIDEPGRPSVIHTRRGEG
                     YMLSAAPQLPPERP"
     gene            1754..>2046
                     /locus_tag="VFN38_02820"
     CDS             1754..>2046
                     /locus_tag="VFN38_02820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010714.1"
                     /translation="MDVLVVDIGGSHVKMLASGAGTPRRFESGDDLTPQVLVQKVRDM
                     TADWKFGAISIGYPGTVDARGPRREPGNLGDGWVGFDFSKAFEKPVRILNDAVL"
BASE COUNT          318 a          702 c          695 g          331 t
ORIGIN      
        1 ggagctgctg caggccatcc gcgtggccgc ctccggcggc cagtacctcg actcgacgct
       61 gacgccgcgc gtgaccgccg gcttcctggc gcgcgagggc aagcgcgtcg gcagggcggg
      121 cgcgacgatc agcgagcgcg agtcgggagt gctgcggctg atcgcttccg gctacagcaa
      181 caaggagatc gcggcgcggc tcgacctgag cgtcaagacg gtcgaagccc acaaagccaa
      241 cgccatgcgc aagctcggcc tcaccggccg tatcgacatc gtcaagtacg ccatcctgca
      301 gggatggctg gacaacgcct gatctacgcc cttcgtcagg gtccgcatta gaccttgggg
      361 ctaaggggat tccctgatcc cctgcggttt cttcccgatt gtcgccggac cggcgcggac
      421 atagagtcgc ggcgtgctcg gcgcggggat atccaaggga ggcaaccatg gagggctctt
      481 cgcagatcgc ctatggaggc aggcgggcgt tgccgctcga ctgcggaacg cagctgcctg
      541 atcactggcg gctcgctcgt gcggcgcacg tggatctcct gctcatgggg atgccgcgcg
      601 tcaacctgct gctcgtcgcg cccgacggcg tcgtgcgcta cgtcctcgaa tcactgctgc
      661 tcgacctgcg cgagccgatc gtccgctggt cgccgggcaa cgtgctcgat ctgtcgagcg
      721 tggatcacgc ctcgacgatc atcctccacg acgtcggcaa ccttcctcca cgcgatcagc
      781 tcggcctcct cgagtggctg gagcacgccg acggccgtgc acaggtcgtc agcacctcgg
      841 ccactcccct cctttcgcgc gtgcagggcg gtgcgttcgt cgacacgctc tactaccgtt
      901 tgaacacggt ctgtgtcgac gtgacggcgt agtccacggc gggtgcgcac gggccggatc
      961 tcacgccggg cgtgcacggc aggtgcgggc ctggcgtcgt gttgctagac tgggggcatg
     1021 cgcatccttc tggtcgagga cgagccgcgc gccgcgcaga tgctcgcgaa agggttgcgc
     1081 gagcaggcct atgccgtcga cgtcgtcggt gacggcgccg aggcgctcta tcaggcgagc
     1141 atcaccgact acgacgctgt gatcctcgac gtgatgctgc cggtgcgcga tggcgtgtcc
     1201 gtgtgccggc agctgcgccg cgaaggatcg accacgccgg tcctgatgct gaccgcgcgc
     1261 gacgccgtcg atgcgcgcat cgaggggctc gacagcggcg ccgacgacta cctgaccaag
     1321 ccctacgatt tcggcgagct gctcgcgcgc ctgcgcgccg tgatccgccg cggacaacgc
     1381 ccgctgacgc cgtcggagat cagcgtcgga ccggtcacga tcgatactcg cgcgcggcgc
     1441 gcctaccgca acggccaccc ggtgacgctt acggcgcgcg agtacgccct cctcgagcac
     1501 ctcatgctgc acgccgacga agtcgtcggg cgtgccgcga tcgccgagca cgtctgggac
     1561 gcgcagtacg aagcgatgtc caacgtcatc gacgtctgca tccagcggct cagacgcaaa
     1621 atcgacgagc ccggccgccc ctcggtgatt cacacccgcc gcggcgaagg ctacatgctg
     1681 tcggccgcgc cacagttgcc gcctgagcgc ccgtagctgg cgcccgggcg ctggtcttgc
     1741 aagcacccgg acgatggacg tgctcgtcgt cgacatcggg ggatcgcacg tgaaaatgct
     1801 ggccagcggc gcaggcacgc cgcggcggtt cgagtccggt gacgacttga cgccacaggt
     1861 gctggtgcag aaggtccgcg acatgaccgc cgactggaag ttcggcgcca tctccatcgg
     1921 ttatcccggt acggtagacg cgcgagggcc gcggcgcgag ccgggtaacc tcggcgacgg
     1981 ctgggtcggc ttcgatttct cgaaggcatt cgagaagccg gtgcgtatcc tcaacgacgc
     2041 cgtcct
//
LOCUS       DASSYW010000181         2199 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_398558, whole genome shotgun sequence.
ACCESSION   DASSYW010000181 DASSYW010000000
VERSION     DASSYW010000181.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2199)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2199)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2199
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_398558"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(67..>2199)
                     /locus_tag="VFN38_02825"
     CDS             complement(67..>2199)
                     /locus_tag="VFN38_02825"
                     /inference="COORDINATES: protein motif:HMM:NF024247.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HET9010715.1"
                     /translation="VGVTVLPNEPLTGFEGMGGFGELYEVVQRMESGQVPLLMTRGAN
                     PAFTMPGFAAAMAKVPFKVSFSMYPDETAAMADLVLPDNHALESWGDAQPTRGTISLQ
                     QPAMEPVFDTRATADVLIQAAKANQATASRYTQADYRSWLFGRIPGGQGAVTSALPRG
                     VMAGSLPNAPAARRAPVRLNAAAASGDYFFVTYFSPTLGDGRGANKPWLQELPDPVSK
                     ICWQTWVEVHPVTANKLGVTNGDVVEVKTASGSVKAPVYLFLGIRPDTIAIPLGQGHT
                     EYGRYAKGTGVNAAAILPLGTNGGGGRVGVTKASMSKVGDEVALVSTEGSARQHGRGI
                     AQAIVAGRGGLVASAQGAEHAGGVAPTGNAAESPEAQAGHEGAQGGEEHMPGDASHAF
                     LPGLRSPVANDAQGDLGSPTSKEKGMYDPKHWSGMAKRRWAMTVDLARCTGCSACVTA
                     CYSENNIPTVGAPHQGRALGPGFPDSHWDTRPGANIVKGREMSWLRIERYFEGGEGNE
                     TTFDGDFETRFTPMLCQHCGNAPCEPVCPVYATYHAPDGLNVQVYNRCVGTRYCSNAC
                     PYKVRYFNWFGYGEPDRPQYAFPEPLHMLLNPDVTVRGKGVMEKCTFCVQRIREAEHR
                     AKLEGREVQPDEFTVACAQACPSRAITFGDASDAGWTVSQLAVDRRAYHVFEELNTYT
                     AVVYLKKVNHPGGSVVAAGAPATAGEAR"
BASE COUNT          289 a          774 c          791 g          345 t
ORIGIN      
        1 ggatgtccgc cgaggcgatg ttggtgcgca gcgggaccgt cgtcgtgtcg tagtcgcggg
       61 cggccatcag cgggcctccc cggccgttgc cggcgcaccg gcggcgacga cgctgccccc
      121 ggggtgattg accttcttca agtagaccac cgcggtgtag gtgttcagct cttcgaagac
      181 atggtaggcg cgccggtcga cggcgagctg cgacacggtc cagccggcat ccgacgcgtc
      241 gccgaaggtg atggcgcgcg acgggcaggc ctgcgcgcac gccaccgtga actcgtcggg
      301 ctggacctcg cgcccctcga gcttcgcccg atgctcggcc tcacggatgc gctgcacgca
      361 gaaggtgcac ttctccatga cgcccttgcc gcgaaccgtg acgtccgggt tgagcagcat
      421 gtgcaggggc tccgggaagg cgtactgcgg gcgatccggc tcgccgtagc cgaaccagtt
      481 gaagtagcgg accttgtacg ggcaggcgtt cgagcagtag cgcgtgccga cgcagcggtt
      541 gtagacctgg acgttgagcc catccggcgc gtggtacgtc gcgtagacgg ggcacaccgg
      601 ctcgcagggc gcgttgccgc agtgctggca gagcatcggc gtgaagcgcg tctcgaagtc
      661 gccgtcgaag gtcgtctcgt tcccctcccc gccctcgaag tagcgctcga tgcggagcca
      721 gctcatctcg cgccccttca cgatgttcgc gccgggacgg gtgtcccagt gcgaatcggg
      781 gaagccgggg cctaacgcgc gaccctggtg cggcgcgccg acggtcggga tgttgttctc
      841 cgagtagcag gcggtgacgc acgccgagca gccggtgcag cgggcgaggt cgacggtcat
      901 cgcccagcgg cgcttggcca tcccgctcca gtgcttcgga tcgtacatcc ccttttcctt
      961 cgacgtcggg ctgccgaggt cgccctgcgc gtcgttggcg acgggggagc ggaggccggg
     1021 gaggaaggcg tggctggcgt cgccgggcat gtgctcctcg ccgccctgtg cgccctcgtg
     1081 ccccgcctgt gcctcggggc tctcggcggc attgccggtc ggcgcgacgc cgcccgcatg
     1141 ctcggcgccc tgcgcgctgg cgacgagccc gccgcggccg gcgacgatcg cctgcgcgat
     1201 gccgcggccg tgctgtcgcg ccgaaccctc ggtcgagacg agtgcgacct cgtcgcccac
     1261 cttcgacatg ctcgccttcg tgacgccgac gcggccgccg ccgccgttcg tgcctaacgg
     1321 caggatcgcc gccgcgttga cacccgtgcc cttggcgtag cgcccgtact cggtgtgccc
     1381 ctgcccgagc gggatcgcga tcgtgtcggg gcggatgccg aggaagaggt agaccggcgc
     1441 cttcaccgag ccgctcgccg tcttcacctc gacgacgtcg ccgttggtga cgccgagctt
     1501 gttcgcagtc accggatgga cctcgaccca cgtctgccag cagatcttgg agacgggatc
     1561 ggggagctcc tgcagccagg gcttgttcgc gccgcggccg tcgccgaggg tcggcgagaa
     1621 gtaggtgacg aagaagtagt cgccgctcgc cgccgcggcg ttcaggcgga ccggggcccg
     1681 ccgcgccgcc ggcgcgttag gcagcgagcc ggccatcacc ccgcgcggga gcgcgctggt
     1741 gaccgccccc tgccccccgg ggatgcgacc gaacagccac gagcgatagt cggcctgcgt
     1801 gtagcggctc gccgtcgcct ggttcgcctt cgccgcctgg atcaggacat cggcggtggc
     1861 gcgggtgtcg aacaccggct ccatcgccgg ctgctgcagc gagatggtgc cccgcgtcgg
     1921 ctgggcatcg ccccagctct cgagcgcgtg gttgtcgggg aggacgaggt cggccatcgc
     1981 cgcggtctcg tccggataca tcgagaagct gaccttgaac gggaccttcg ccatcgccgc
     2041 cgcgaagccg ggcatcgtga acgccgggtt cgcgccgcgg gtcatcagca gcgggacctg
     2101 gccgctctcc atccgctgca ccacctcgta cagctcgccg aatccgccca tcccctcgaa
     2161 gccggtgagc ggctcgttag gcaggacggt gacgccgac
//
LOCUS       DASSYW010000182         2115 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1534974, whole genome shotgun sequence.
ACCESSION   DASSYW010000182 DASSYW010000000
VERSION     DASSYW010000182.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2115)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2115)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2115
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1534974"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..853)
                     /locus_tag="VFN38_02830"
     CDS             complement(<1..853)
                     /locus_tag="VFN38_02830"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HET9010716.1"
                     /translation="MSLIENVSRRHFLGTTLSTSAFVLAAQVLPKSAFAQDPGVRTRA
                     QGAALNPSVYLGIETDGRIYIITHRSEMGTGIRTTLPLVAADELDADWSFVTIEQGLG
                     DTKYGDQNTDGSRSIRDFYDAFRRAGAAARSMLVQAAAARWKVPASEITIQNSILIHA
                     KSNRRLAFATVVADAAKLPVPKDADLTFKNKAEWNFVGKERGTYDLRDITTGKAQFGL
                     DTFREGMVIASIEHPPVVGASVKSLDDKAALAVKGVRQTVTLPAPKPPLMFQSLGGVA
                     VIADNTWA"
     gene            complement(850..1317)
                     /locus_tag="VFN38_02835"
     CDS             complement(850..1317)
                     /locus_tag="VFN38_02835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HET9010717.1"
                     /translation="MVSLRVNGTSRSFDGDDDMPLLWYLRDELRLTGTRFGCGAGLCG
                     ACTVHVDGRAVRACQTPMRTAQGKSVTTIEGLSADGSHPVQQAWAEHNVPQCGYCQSG
                     QIMQAADLLARTPEPSDPEIDRAMAGNICRCGTYQRIRAAIKTAANLRKGGRA"
     gene            complement(1332..1796)
                     /locus_tag="VFN38_02840"
     CDS             complement(1332..1796)
                     /locus_tag="VFN38_02840"
                     /inference="COORDINATES: protein motif:HMM:NF039485.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YidB family protein"
                     /protein_id="HET9010718.1"
                     /translation="MGLLDSILGGGGAAQLPGDLGGAQSPLGSILAGLTGGNQSAGSG
                     LLSAVMMLVQQNGGLGNVVAQFQQQGLGQQAASWVGTGANEAISADHVSSVFGSGALG
                     QIAAQLGMDQGQASHAVAQLLPEVVNQLTPQGQVTGDSGDMLSQALSMLRSS"
     gene            complement(1869..>2115)
                     /locus_tag="VFN38_02845"
     CDS             complement(1869..>2115)
                     /locus_tag="VFN38_02845"
                     /inference="COORDINATES: protein motif:HMM:NF023010.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF3237 family protein"
                     /protein_id="HET9010719.1"
                     /translation="TIETDKGQLIYVQNPGVRTAAPDVMKKLLAGELVDPALVYFRTQ
                     PKFETSAPELQWITRSLFVGIGERYPSEVVIRFYRVE"
BASE COUNT          313 a          742 c          696 g          364 t
ORIGIN      
        1 cggcccatgt gttgtcggcg atcacggcca cgcccccgag cgactggaac atgagcggcg
       61 gtttcggcgc ggggagcgtc accgtctggc gcacgccctt cacggccagc gccgccttgt
      121 cgtcgaggct cttcaccgag gcgcctacga ccggcgggtg ctcgatcgag gcgatcacca
      181 tgccctcgcg gaaggtgtcg aggccgaact gcgccttgcc cgtggtgatg tcgcgcaggt
      241 cgtaggtgcc gcgttccttg ccgacgaaat tccactccgc cttgttcttg aacgtgaggt
      301 ccgcatcctt cggcaccggc agcttcgccg cgtcggccac cacggtggca aacgccagcc
      361 ggcggttgct cttcgcgtgg atcaggatgc tgttctggat ggtgatttcc gacgccggca
      421 ccttccagcg cgcggcggcc gcctgcacga gcatcgaccg cgcggcagcg ccggcgcggc
      481 ggaacgcgtc gtagaagtcg cggatcgatc gcgagccgtc ggtgttctgg tcgccgtact
      541 tcgtgtcgcc gagcccctgc tcgatggtga cgaagctcca atcggcgtcg agctcgtcgg
      601 cggccacgag cggcagcgtg gtgcggatgc cggtgcccat ctccgagcgg tgcgtgatga
      661 tgtagattct gccgtcggtc tcgatgccga gatagacgct cgggttgagc gccgcgccct
      721 gcgcgcgcgt gcggacgcct ggatcctgcg cgaacgcgga cttcggcagc acctgagcgg
      781 ccagcacgaa ggcgctggtc gagagcgtgg tgccgaggaa gtggcggcgg ctgacgtttt
      841 cgatgagact cacgcccggc ctcccttccg caggttcgcc gcggtcttga tggcggcgcg
      901 aatccgctga taggtgccgc agcggcagat gttgccggcc atggcgcggt cgatctcagg
      961 gtcgctcggt tccggcgtgc gagcgagcag gtccgcggcc tgcatgatct gcccgctctg
     1021 gcagtagccg cactgcggca cgttgtgctc ggcccaggcc tgctgcaccg ggtgcgaccc
     1081 gtcggcgctc agcccctcga tggtcgtgac gctcttcccc tgcgcggtgc gcatcggcgt
     1141 ctggcacgcg cgcaccgcgc gtccgtccac gtgcacggtg caggcgccac acaggccggc
     1201 gccgcacccg aaccgcgtac cggtgagccg cagctcgtca cgcaaatacc acaacagcgg
     1261 catgtcgtcg tcgccgtcga acgaccgcga cgttccgttg actctcaaac tgaccatcga
     1321 tgcgaatcct cctacgaact gcgcagcatg gacagcgcct gcgacagcat gtcgccgctg
     1381 tcgcccgtga cctgcccttg cggcgtgagc tgattgacga cttcgggcag gagctgcgcc
     1441 accgcgtggc tcgcctggcc ctggtccatg ccgagctgcg cggcgatctg gccgagcgcc
     1501 cctgacccga atacgctgga cacgtggtcc gccgagatcg cctcgttcgc gccggtgccg
     1561 acccatgagg ccgcctgctg accgagcccc tgctgctgga actgcgcgac cacgttgccg
     1621 agaccgccgt tctgctgcac cagcatcatc accgccgaca acagaccgga ccccgccgac
     1681 tgattacccc cggtgagccc cgcgaggatg gacccgagcg ggctttgtgc tccgccgaga
     1741 tcaccgggca attgcgccgc gccgccgccg ccgagtatcg aatccaacaa tcccatggcg
     1801 acctccccgg ggaaaaattg ccgacgaagt tcaacacggc attgtagtgc ggccggccgc
     1861 ccgccggctt attccacccg gtagaaacgg atgaccacct cgctcggata tcgctcacct
     1921 atgcccacga agagcgaccg cgtgatccac tgcagttccg gcgccgaggt ctcgaatttc
     1981 ggctgcgtgc ggaagtagac gagcgccggg tccaccagct cgcccgccag cagcttcttc
     2041 atgacgtccg gtgccgcggt gcgcacgccc gggttctgca cgtaaatcag ctgtcctttg
     2101 tcggtttcga tggtg
//
LOCUS       DASSYW010000183         4296 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_834958, whole genome shotgun sequence.
ACCESSION   DASSYW010000183 DASSYW010000000
VERSION     DASSYW010000183.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4296)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4296)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4296
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_834958"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2875
                     /locus_tag="VFN38_02850"
     CDS             <1..2875
                     /locus_tag="VFN38_02850"
                     /inference="COORDINATES: protein motif:HMM:NF014850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycoside hydrolase family 2 TIM barrel-domain
                     containing protein"
                     /protein_id="HET9010720.1"
                     /translation="LPLARKRSRDPAMRHAAFRTLLAALLAAVASAAAGAQAPRDSIP
                     LPEHPRPDFERADWQNLNGRWRFRFDAADAGERAGWERAPLERPRTILVPFSWGAPLS
                     GVPDSASIGWYERTITVPERWKGRRVYLVVGASDWRTSAWLDGAKLGDHQGGYTPFSL
                     ELTKVATPGAPQRLTLRVDDSDHPFKLEGKQGYGKARGIWQTAYLEARGGDPLETLHF
                     TPSASLNGVTVEARLAGPAPAPLTLRVAFTNREGQPAVTRTIPRGASSVRFDVPLPDA
                     HRWSLDDPFLHEVAATVSGRGVATDSVRSYFGMRTIGVEKLPGTSYPYVAINGKPVYL
                     QLALDQAYHAAGFYTFPSDSFTRMEILRARQIGLNGLREHIKIETPRKLYWADRLGVL
                     IMADVPNWWGPPTDTAFREHDYAMREMIARDYNHPAVFSWTPFNETWGLTTKVDGKEQ
                     YLPATQQRVIETVRLAKSLDATRLVEDNSVCCGRGHTVSDINSWHNYLPGFEWERHVA
                     MVSDSTFPGSGWNFEDGYAQGGQPMINSEFGNVWGYEGSTGDVDWSWDYHMAIDAFRR
                     HPKLAGWLYTEHHDVINEWNGYWRFDRTSKETGVGALVDGMTLRDFHSPFYVAVGRAG
                     SESVRAGATVQVPLYASFLADGGGVGDSLLLRTELYGWNSLGERRTYATSTRRIPYRP
                     WLSAPLEPLAVTMPDQPAVVVLAVRLEDAAGTVLHHNFTTFVVEGTAPAQATLADGRR
                     ARVSRVGAGDFAKAEWSRKTWTVLDGLKADGTGSGYFEYRIPWPAGLRRADVAGASFL
                     VEASAKQLFGKDRDSTTREEGDYMRGGGFQDPSRNRNSYPMTDETKYPSAVTVRVAGR
                     VAGRFELADDPADHRGILSWHSQKRDRFLREAGSYGELLRVAIPDSSLDAAAKLGEVV
                     VRLEVSDALPGGLAIYGAKFGRYPVDPTVLFILKDQTDVAGPR"
     gene            2935..4077
                     /locus_tag="VFN38_02855"
     CDS             2935..4077
                     /locus_tag="VFN38_02855"
                     /inference="COORDINATES: protein motif:HMM:NF016497.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 43 protein"
                     /protein_id="HET9010721.1"
                     /translation="MTTTETTKPAHHPSRPAWRTLAAASAFAIAACGGGGGGTPPITE
                     PPGPTAQQYLNPVINADFPDPAVMKASDGYYYAYATQTTGVRLQVARSRDLVSWTQLG
                     EAMPVKPAWASESQNFWAPDVNERDGHFVMYFSAQIDSAKRITPSDGFCIGMATATTA
                     AGPFTDVGSPVECGPNFTTIDPMGFDDPQTGKRYLYWGSAGSPLLVQELAPDRHSFAD
                     GTISTTLVFPRSGNDPSAYDTGLIEGPWVTYVAPYYYLYFSGNGCCGAGAHYAVMVAR
                     STSPTGPFEVHTSGGTSQAAEPVLRGAGPWLAPGHNAVVKDAAGAEWMVYHAISSTNP
                     YLFPGNTAISRRPMLIDRITYVNGWPTVGTSGTPTSTPQTRPAATP"
     gene            4098..>4296
                     /locus_tag="VFN38_02860"
     CDS             4098..>4296
                     /locus_tag="VFN38_02860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:dicarboxylase symporter family
                     transporter"
                     /protein_id="HET9010722.1"
                     /translation="MQPDTTSDASPGRLPGLRRNLTVQVLVAISLGILLGALEPGWGK
                     AMKPVGDTFINLVKMVIAPIIF"
BASE COUNT          648 a         1606 c         1470 g          572 t
ORIGIN      
        1 gctcccgctc gcccgcaaga gatctcgcga ccccgccatg cgccacgccg ccttccgcac
       61 cctcctcgcc gcgttgctcg ccgccgtcgc ttccgccgcg gcgggcgcac aggcgccccg
      121 cgactccatc cccctgcccg agcatccgcg ccccgacttc gagcgcgccg actggcagaa
      181 cctgaacggc cgctggcgct tccgcttcga cgccgccgac gcgggggagc gcgcgggctg
      241 ggagcgcgcg ccgctcgagc gcccgcgcac gatcctcgtc cccttctcct ggggcgcccc
      301 cctctccggc gtacccgact cggcgagcat cggctggtac gagcggacga tcacggtgcc
      361 cgagcgctgg aagggacgcc gcgtgtatct ggtggtgggc gcgtcggact ggcggacgtc
      421 ggcctggctc gacggcgcga agctcggcga tcaccagggg ggctacaccc ccttctcgct
      481 cgagctcacg aaggtggcga cgccgggcgc gccgcagcgc ctgacgctgc gcgtggacga
      541 cagcgaccat cccttcaagc tcgaagggaa gcagggctac ggtaaggcgc gcggcatctg
      601 gcagacggcg tacctcgagg cgcgcggcgg cgaccccctg gagacgctgc acttcacgcc
      661 cagcgcgtcg ttgaacggag tgacggtgga ggcgcgcctc gccggtccgg cgcccgcgcc
      721 gctcacgctg cgcgtcgcct tcaccaaccg cgaagggcag ccggcggtga cgcgcacgat
      781 cccgcgcggc gcgagcagcg tgcgcttcga cgtccccctg cccgacgcgc atcgctggtc
      841 gctcgacgac cccttcctcc acgaggtcgc ggcgacggtg agcggacgcg gcgtcgccac
      901 cgactcggtg cgcagctact tcggcatgcg cacaatcggc gtcgagaagc tgcccggcac
      961 gagctacccc tacgtggcga tcaacgggaa gcccgtgtat ctccagctcg ccctcgacca
     1021 ggcctatcac gcggccggct tctacacctt cccgagcgac tccttcacgc ggatggagat
     1081 cctccgcgcg cggcagatcg ggctcaacgg acttcgcgag cacatcaaga tcgagacgcc
     1141 gcgcaagctg tactgggccg accggctggg cgtgctgatc atggccgacg tccccaactg
     1201 gtggggaccg ccgaccgata cagcgttccg cgagcacgac tacgcgatgc gcgagatgat
     1261 cgcgcgcgac tacaaccacc ccgccgtctt ctcctggacc ccgttcaacg agacgtgggg
     1321 gctgacgacg aaggtggatg gaaaggagca gtacctgccg gcgacgcagc agcgcgtgat
     1381 cgagaccgtg cgcctggcga agtcgctcga cgcgacgcgg ctcgtcgagg acaactcggt
     1441 ctgctgcggg cgcggccaca cggtgtcgga catcaactcc tggcacaatt acctgcccgg
     1501 cttcgagtgg gagcgccacg tcgcgatggt gagcgacagc accttccccg gctcggggtg
     1561 gaacttcgag gacggctacg cgcagggggg ccagccgatg atcaactcgg agttcggcaa
     1621 cgtctggggc tacgagggga gcaccggcga cgtggactgg agctgggact accacatggc
     1681 catcgacgcc ttccgccgtc acccgaagct cgccggctgg ctctacaccg agcaccacga
     1741 cgtgatcaac gagtggaacg gctactggcg cttcgaccgg acgagcaagg agaccggggt
     1801 cggcgcgctg gtggacggga tgacgctgcg cgacttccac tcgcccttct acgtcgccgt
     1861 ggggcgcgcc gggagcgaga gcgtgcgcgc cggcgcgacc gtgcaggtgc cgctctacgc
     1921 ctccttcctc gccgacggcg gcggggtggg ggactcgctc ctcctccgca cggagctcta
     1981 cggctggaac tcgctgggcg agcggcggac ctacgccacc agcacccgcc ggattcccta
     2041 caggccatgg ctgtcggcgc cgctcgagcc gctcgccgtg acgatgcctg accagccggc
     2101 ggtcgtcgtc ctcgcggtgc gcctcgagga cgccgccggc acggtgctgc accacaactt
     2161 cacgacgttc gtcgtcgagg gaacggcgcc ggcccaggcg acgctcgccg acgggcgccg
     2221 ggcgcgcgtc tcgcgcgtgg gcgcgggcga cttcgcgaag gccgagtggt cgcggaagac
     2281 gtggaccgtg ctcgatgggc tgaaggccga tggcaccggt tcgggctact tcgagtaccg
     2341 catcccctgg ccggcgggcc tccgccgcgc cgacgtggcg ggggcgagct tcctcgtcga
     2401 ggcgtcggcc aagcagctct tcggcaagga ccgcgacagc acgacgcgcg aggaggggga
     2461 ctacatgcgc ggcggcggct tccaggaccc gagccgcaac cgcaactcgt acccgatgac
     2521 cgacgagacg aagtacccga gcgcggtcac ggtgcgcgtc gccggccggg tcgccggccg
     2581 cttcgagctg gccgacgatc cggcggacca ccgcggcatc ctctcctggc actcccagaa
     2641 gcgggaccga ttcctgcgcg aggcgggctc ctacggcgag ctgctgcggg tcgcgatccc
     2701 cgactcgtcg ctcgacgcgg cggcgaagct cggcgaggtg gtggtgcgcc tcgaggtgag
     2761 cgacgccctg cccggcgggc tggcgatcta cggcgcgaag ttcgggcgct acccggtgga
     2821 cccgaccgtg ctcttcatcc tgaaggacca gacggacgtg gcgggcccgc gatgaccgct
     2881 gcgcgcggat cgcggacgtt cacccacccg accgagacga cgaggcagac cggcgtgacg
     2941 acgacagaga cgacgaagcc cgcgcaccac ccctccaggc ccgcgtggcg caccctggcg
     3001 gccgcctcgg cgttcgccat cgcggcctgc ggcggcggtg gcggcgggac cccgccgatc
     3061 accgagcccc ccggaccgac cgcgcagcag tacctcaacc cggtgatcaa cgccgacttc
     3121 cccgacccgg cggtgatgaa ggcgagcgac ggctactact acgcctacgc cacccagacg
     3181 accggagtgc gcctccaggt cgcgcgctcg cgcgacctcg tctcgtggac gcagctcggc
     3241 gaggcgatgc cggtcaagcc ggcgtgggcg agcgagtcgc agaacttctg ggcgcccgac
     3301 gtcaacgagc gcgatggcca cttcgtgatg tacttctcgg cgcagatcga ctccgcgaag
     3361 cgcatcacac cgagcgacgg cttctgcatc ggcatggcca cggcgacgac cgccgccggc
     3421 ccgttcaccg acgtcggcag cccggtggag tgcggaccca acttcacgac gatcgacccg
     3481 atggggttcg acgacccgca gacggggaag cgctacctct actggggctc ggcgggctcc
     3541 ccgctcctcg tccaggagct ggcccccgac cggcacagct tcgccgacgg cacgatctcc
     3601 accacgctcg tcttcccgcg cagcggcaac gacccgagcg cctacgatac cgggctgatc
     3661 gaggggccct gggtgaccta cgtcgcgccc tactactacc tctacttctc cggcaacggc
     3721 tgctgcggcg cgggggcgca ctacgcggtg atggtcgccc gctcgacctc tcccaccggg
     3781 cccttcgagg tgcacacctc gggcggcacg tcgcaggcgg cggagccggt gctccgcggc
     3841 gccggcccct ggctcgctcc cggacacaac gccgtcgtca aggacgcggc cggcgcggaa
     3901 tggatggtct accacgcgat cagctccacg aacccctacc tctttcccgg caacaccgcg
     3961 atctcgcgcc gcccgatgct gatcgaccgc atcacctacg tgaacggctg gccgacggtc
     4021 gggacgagcg gcacgccgac gtccacgccg cagacccggc cggcggccac cccctgatcc
     4081 gccgagccgc gcgccgcatg cagcccgaca cgacgagcga cgcgtccccg gggcgcctgc
     4141 ccggccttcg ccgcaacctc accgtccagg tgctggtcgc gatctcgctc ggcatcctgc
     4201 tcggcgcgct cgagcccggg tgggggaagg cgatgaagcc ggtcggcgac accttcatca
     4261 acctggtgaa gatggtcatc gcgccgatca tcttcc
//
LOCUS       DASSYW010000184         2013 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1504201, whole genome shotgun sequence.
ACCESSION   DASSYW010000184 DASSYW010000000
VERSION     DASSYW010000184.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2013)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2013)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2013
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1504201"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..245
                     /locus_tag="VFN38_02865"
     CDS             <1..245
                     /locus_tag="VFN38_02865"
                     /inference="COORDINATES: protein motif:HMM:NF019982.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HET9010723.1"
                     /translation="APPPPAERLRACDAPALLVAGARDAKYVGIGRSLEAVLPRARLV
                     VVPEAGHTVHLEQPAAFAAAVTAFLADVASTSEGWR"
     gene            379..1200
                     /gene="menB"
                     /locus_tag="VFN38_02870"
     CDS             379..1200
                     /gene="menB"
                     /locus_tag="VFN38_02870"
                     /EC_number="4.1.3.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016079909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008935 - 1,4-dihydroxy-2-naphthoyl-CoA
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009234 - menaquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoyl-CoA synthase"
                     /protein_id="HET9010724.1"
                     /translation="MTVEWKSIKTYTDIRYERADEGIAKITINRPEVRNAFRPRTVAE
                     LIDAFNHARDDASTGVVLLTGAGDLAFCSGGDQRVRGHGGYVGEDQIPRLNILDVQKQ
                     IRYLPKPVIAVVAGYAIGGGHVLHLVCDLTIAADNARFGQTGPIVGSFDGGYGASYLA
                     RVVGHKKAREIWYLCRQYGAQEALDMGLVNTVVPLERLEAEALQWAREILEKSPTAMR
                     LLEASFNADTDGLAGLQQLAGDATLLYYLTEEAKEGRNAFLEKRRPDWSKFPRFP"
     gene            1197..>2013
                     /locus_tag="VFN38_02875"
     CDS             1197..>2013
                     /locus_tag="VFN38_02875"
                     /EC_number="2.5.1.74"
                     /inference="COORDINATES: protein motif:HMM:NF004751.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0046428 - 1,4-dihydroxy-2-naphthoate
                     octaprenyltransferase activity [Evidence IEA];
                     GO_process: GO:0009234 - menaquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoate
                     polyprenyltransferase"
                     /protein_id="HET9010725.1"
                     /translation="MSTASPVAPSPARAWVLAARPATLPAAAVPVLVGTAASVSEGAR
                     LRAPVFAATLAAALLIQIGTNFANDYSDFHRGADHEGRLGPLRVTQSGLLEQAAVRRG
                     IVAAFGLATLLGLYLASVGGWPIVAIGVLSIVCGLAYTGGPWPFGYHGLGEVFVFIFF
                     GLVAVTGTAYLQQGSWSPLALAVAVPIGLLVTNILVVNNLRDLPTDRAAGKRTLAVRI
                     GERATRWQYALFAALACAVPAALALTRHGARWLLLPWLAAPMAVTLVRRVLGGV"
BASE COUNT          250 a          756 c          717 g          290 t
ORIGIN      
        1 cggccccgcc gccgcccgcc gagcgcctcc gcgcgtgcga cgcgcccgcg ctgctcgtcg
       61 ccggcgcgcg cgacgcgaag tacgtcggga tcggccgctc gctcgaggcg gtactgccgc
      121 gcgcccgcct cgtcgtcgtc ccggaggcgg ggcacaccgt gcacctcgag cagccggcgg
      181 cattcgccgc cgcggtgacc gcgttcctcg ccgacgtcgc gtccacgtcc gaggggtggc
      241 gctgagcgcc caccgcgccg cgggcgggtc gtgcccgctc cgccctgcac ggccggcgcg
      301 cggtgcgata acttcccacg cccggcgatc tgctgggacg cggcaggcgt cccgccgcgc
      361 tgacttcgag gagatcgtat gacggtcgaa tggaagagca tcaagaccta cacggacatc
      421 cgatacgagc gggccgacga ggggatcgcg aagatcacca tcaaccgccc cgaggtgcgc
      481 aacgccttcc ggccccggac cgtcgccgag ctgatcgacg cgttcaacca cgcgcgcgac
      541 gacgcgtcca ccggcgtcgt cctgctcacc ggcgcgggcg acctcgcctt ctgctccggc
      601 ggtgaccagc gcgtgcgcgg ccacggtgga tacgtgggcg aggaccagat cccgcggctg
      661 aacatcctcg acgtgcagaa gcagatccgc tacctgccga agcccgtgat cgcggtggtc
      721 gccggctacg ccatcggcgg cgggcacgtg ctgcacctcg tctgcgacct caccatcgcc
      781 gcggacaacg cgcgcttcgg gcagactggc cccatcgtcg gtagcttcga cgggggctat
      841 ggcgccagct acctcgcgcg cgtggtcggt cacaagaagg cgcgcgagat ctggtatctc
      901 tgccggcagt acggggcgca ggaagcgctc gatatggggc tcgtgaacac cgtcgtgccg
      961 ctcgagcggc tggaggcgga ggcgctgcag tgggcgcgcg agatcctcga gaagagcccg
     1021 acggcgatgc gcctcctcga ggcctcgttc aacgccgaca ccgacgggct ggcggggctc
     1081 cagcagctcg ccggcgacgc cacgctgctg tactatctca ccgaggaggc gaaggagggc
     1141 aggaacgcgt tcctcgagaa gcgacggccc gactggtcca agttcccccg cttcccgtga
     1201 gcaccgcgtc ccctgtcgcg ccgtcgccgg cacgcgcgtg ggtgctcgcg gcgcgcccgg
     1261 ccacgctgcc ggcggccgcc gtcccggtgc tcgtcggcac cgccgcctcg gtcagcgagg
     1321 gggcgaggtt gcgcgccccc gtcttcgccg ccacgctcgc cgcggcgctg ctcatccaga
     1381 tcgggaccaa cttcgcgaac gactactcgg acttccaccg cggcgccgac cacgaagggc
     1441 ggctcggccc gctgcgcgtg acgcagagcg gactgctcga gcaggccgcc gtgcgacgcg
     1501 gcatcgtcgc cgccttcggc ctggccacgc tgctcggcct ctacctcgcg tcggtcggcg
     1561 ggtggcccat cgtcgcgatc ggcgtgctgt cgatcgtctg cgggctcgcg tacaccggcg
     1621 ggccgtggcc gttcggctat cacggcctcg gcgaggtgtt cgtgttcatc ttcttcggcc
     1681 tagtcgcggt cacgggtacg gcgtacctgc agcaggggtc gtggagcccg ctggccctcg
     1741 ccgtcgcggt tccgatcggg ctgctcgtca cgaacatcct ggtcgtcaac aacctgcgcg
     1801 acctgccgac ggaccgggcg gccgggaagc gcacgctcgc cgtgcggatc ggcgagcgtg
     1861 cgacgcgctg gcagtacgcg ctgtttgccg ccctcgcctg cgcggtgccg gcggcgctcg
     1921 cgctcacgcg gcacggcgcg cgctggctcc tgctcccgtg gctcgccgcg ccgatggccg
     1981 tcaccctcgt gcggcgcgtg cttggcggcg ttg
//
LOCUS       DASSYW010000185         2729 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1227684, whole genome shotgun sequence.
ACCESSION   DASSYW010000185 DASSYW010000000
VERSION     DASSYW010000185.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2729)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2729)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2729
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1227684"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..315
                     /locus_tag="VFN38_02880"
     CDS             <1..315
                     /locus_tag="VFN38_02880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010726.1"
                     /translation="PVKASGTLSYDAYSNLQINGKIDDPRLQKAIPLDFNGRVVIDAA
                     KREFYPADIEAGPKVDTRKLAPIGVDKVRKFEVTGDRLVVTYQDAAGKPTARTTWRRR
                     AA"
     gene            312..>2729
                     /locus_tag="VFN38_02885"
     CDS             312..>2729
                     /locus_tag="VFN38_02885"
                     /inference="COORDINATES: protein motif:HMM:TIGR02604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PVC-type heme-binding CxxCH protein"
                     /protein_id="HET9010727.1"
                     /translation="MRYRATVAALFLLIVATASMRVWSTSAALQPPARNRLTLTHDAR
                     AGTISVYRPGSATPVLVHNAPPDSRPYIHPIAAPDGKGILTETSPSHHPHQTGLYWGF
                     TRLNGRDYFHNRGGDYWRRSAVAVIDTEGEDVRWQTVYDLLDAGGGVVLTETARWTMR
                     ERSGSFVVDLEWKGEARTDVTIGQYDYGGLFLRMPWREGIRGEVVNAARQRNQRAEGQ
                     RAMWIDVAMQVAGRSDLAHVAIFDHPANPGYPQPWRVDGQLGVGSARSRLGDATIKKG
                     GTEVIRHQFIAYTGTLDDVELTTAWAAFSGNKSMYSTSVLWGIAQREGREAKFLTPAQ
                     AVSQMTLIDGYQAGAWAAEPMITQPMAFCWDDRGRLWVAENRDYESRVQGFSNAGDSR
                     ILILEDTDRDGVADSRTVFMEGIVFPSAIAVGFGGVFVGAPPNLLFIPDRNGDDKAAV
                     DDIEVRLTGWGIQDRHETVNSLHWGPDGWLYGLQGYATPSKIRKPEGRGRVYRHRETF
                     PDDLLAGDGVEINGGVWRYHPTKDVFEVVAHGFSNPWGIDYDAKGQLLISACVIPHLW
                     HVIPGGIYHRQGGQHFNPYVYDDIKTIADHRHRSAHGGARVYQSDAFPPSQQGRIFMA
                     NIHEHAVLSDVLERKGSGFTAHHGDDFLMANNAQWIGFSVEIGPDGALYVLDWHDGDI
                     CGQDILHKETGRIYRIVPKTSLAADWPGRYADLQQMSDARLVDLQTSRSDWHARRARV
                     ILQQRAATHRLAPGTHDALRRLFASSSNVDHRLRAMWALHVTGGWTADALADQLGDAS
                     EHVRAWAI"
BASE COUNT          465 a          924 c          939 g          401 t
ORIGIN      
        1 cccgtgaagg caagcggcac cctttcctac gacgcgtaca gcaacctgca gatcaacggc
       61 aagatcgacg acccgcggct gcaaaaggcg attccgctcg acttcaacgg ccgcgtcgtc
      121 atcgacgccg ccaagcgcga gttctatccg gcggacatcg aggccggccc caaggtcgac
      181 acccgcaagc tggcgccgat cggcgtcgac aaggtgcgca agttcgaagt caccggcgac
      241 cgcctcgtcg tgacctatca ggacgccgcg gggaagccga ccgcgaggac gacgtggagg
      301 cgccgggcgg cgtgagatat cgggccaccg tcgctgctct cttcctcctc atcgtcgcca
      361 ccgcctcgat gagggtgtgg agcacgtccg ccgccctgca gccgccggct cgaaaccggc
      421 tcacgctcac gcacgacgcg cgcgccggca ccatttcggt ctatcgcccc ggctccgcga
      481 cgccggtgct cgtccacaac gcgccgccgg actcgcgtcc gtacatccat ccgatcgccg
      541 cacccgacgg caagggcatc ctcaccgaga ccagcccttc acatcatccg caccagacgg
      601 gcctctattg ggggttcacc cggctgaacg gccgcgacta cttccacaac cgcggcggcg
      661 actactggcg gcgctccgcc gtcgccgtca tcgacaccga gggcgaggac gtacgctggc
      721 agacggtgta cgacctcctc gatgccggcg gcggcgtcgt cctgacggag acggcacgct
      781 ggacgatgcg ggagcgcagt gggtcgttcg tcgtcgatct cgagtggaag ggcgaggcgc
      841 ggaccgacgt cacgatcggg cagtacgact acggcggcct gtttctgcgg atgccgtggc
      901 gggagggcat ccgcggcgag gtcgtgaacg cggcgcggca gcgcaaccag cgcgccgaag
      961 ggcagcgcgc gatgtggatc gacgtggcga tgcaggtcgc cggccgcagc gatctggcgc
     1021 acgtcgcgat cttcgatcat ccggcgaatc ccggctatcc gcagccgtgg cgcgtcgacg
     1081 gtcagctcgg cgtcggctcg gcgcgctcgc ggctgggcga cgccacgatc aagaagggcg
     1141 gcacggaggt catccgccac cagttcatcg cctacaccgg cacgctcgac gacgtggagc
     1201 tgacgacggc gtgggcggcc ttcagcggca acaagtcgat gtactcgacg tcagtgctgt
     1261 ggggcatcgc gcagcgtgaa gggcgcgagg cgaagttcct gacgccagcg caggccgtct
     1321 cgcagatgac gctcatcgac ggttatcagg caggcgcctg ggcggccgag ccgatgatca
     1381 cgcagccgat ggccttctgc tgggacgatc gcggacggct gtgggtcgcc gaaaaccggg
     1441 actacgaatc gcgggtgcag ggcttctcga acgccggcga cagccgcatt ctgatcctcg
     1501 aggacaccga tcgcgacggc gtcgccgaca gccgcacggt gttcatggaa gggatcgtgt
     1561 ttccgtcggc gatcgccgtc ggcttcggcg gggtcttcgt cggcgcgccg ccaaacctgt
     1621 tgttcattcc cgacaggaac ggcgacgaca aggcagctgt cgacgacatc gaggtccggc
     1681 tgacagggtg ggggattcag gatcgtcacg agacggtcaa cagcctgcac tgggggcccg
     1741 acggctggtt gtacgggctg cagggctacg cgacgccgtc gaagatcagg aagccggagg
     1801 gcagggggcg cgtctacagg caccgcgaga cgtttcccga cgacctcctt gccggcgacg
     1861 gcgtcgagat caacggcggc gtgtggcgct accatccgac gaaggacgtg ttcgaggtcg
     1921 tcgctcacgg cttcagcaac ccgtggggga tcgattacga cgcgaagggc cagctcctca
     1981 tcagcgcgtg tgtgatcccg catctctggc acgtgattcc gggcgggatc tatcaccgcc
     2041 agggcggcca gcacttcaat ccgtacgtct acgacgacat caagacgatc gccgaccatc
     2101 gccatcgctc cgcgcacggc ggcgcccggg tttaccagtc ggacgcgttt ccgccgtcgc
     2161 agcagggccg tatcttcatg gccaacatcc acgagcacgc ggtgctgtcc gatgtgctcg
     2221 agcgcaaggg ctccggcttc accgcgcacc acggcgacga tttcctgatg gcgaacaacg
     2281 cgcagtggat cggtttcagc gtcgagatcg ggcccgacgg agcgctctac gtgctcgact
     2341 ggcacgacgg cgacatctgc gggcaggaca tcctgcacaa ggagaccggg cggatctatc
     2401 gcatcgtgcc gaagacgtcg ctcgccgccg actggccggg ccgctacgcg gatctgcagc
     2461 agatgtccga tgcgcggctc gtcgatctgc agacgagccg gagcgactgg cacgcgcggc
     2521 gcgcgcgcgt gatcctgcag cagcgcgcgg cgacgcaccg gctggcaccg gggacgcacg
     2581 acgcgctgcg ccggctgttc gcgtcaagca gcaacgtcga ccatcggctg cgcgcgatgt
     2641 gggcgctgca cgtcactggc ggctggacag ccgacgcgct cgccgaccag ctgggcgacg
     2701 cgagcgagca cgtacgcgcc tgggcgatc
//
LOCUS       DASSYW010000186         3122 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_429426, whole genome shotgun sequence.
ACCESSION   DASSYW010000186 DASSYW010000000
VERSION     DASSYW010000186.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3122)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3122)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3122
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_429426"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..602)
                     /locus_tag="VFN38_02890"
     CDS             complement(<1..602)
                     /locus_tag="VFN38_02890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010728.1"
                     /translation="MAMRASHSSSVVIAAPDLPGAAAILTPDALDFVAALQRAFDGRR
                     REVMGRREARRRELAAHPAGAPLDFPAETAHLREAPWQVASSPADLTDRRVEITGPVE
                     RKMMINALNSGARVFMADLEDACSPTWANVVDGQRNLVDAVRGTLAMDVGGKAYRLNE
                     RTATLVVRPRGWHLDERHLLIDGAPASASLVDFGLYFFHNA"
     gene            760..2148
                     /locus_tag="VFN38_02895"
     CDS             760..2148
                     /locus_tag="VFN38_02895"
                     /inference="COORDINATES: protein motif:HMM:NF015316.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein transport protein"
                     /protein_id="HET9010729.1"
                     /translation="MTLHRASRYTLALALLALPAAAGAQAFGLNEIGSCALARGFAAT
                     AMPCDDGSSIYWNPGAMPRTRGWSVAGGAAVIHINGDFIQDTTFTRHDSDVPTAVVPH
                     LFVNYRGAGKLAYGLGVYVPYGLTSQWADDFPGRFAAKKASLQTLYVQPNISYQITPN
                     WSIGGGPVFGHSTVELIQGVDLSQQRTSATGPTFGQLGIPLRTEFARANLKGSATAFG
                     VDLGVHGKLTPAWDLGLRFLSQLSFDYTDADATFEARNTGLVLAANNPFGVPAGTPVD
                     ALVASQFTTGALVPQKVSTQIRHPAQVQVGFAYSGFQNTTLSAEYSYVGWKSFNQLPV
                     DFQGGATDRVLQEDYNNTSGIRLGAEHRLVSGLALRAGFTANTAAAPDETVTPLLPEQ
                     DRSLAGLGIGYPFGGRYVLDASYARVMTPGRRGRIDERAPGSSATQAIALNSGSYILT
                     ANILALTLKASF"
     gene            2171..>3122
                     /locus_tag="VFN38_02900"
     CDS             2171..>3122
                     /locus_tag="VFN38_02900"
                     /inference="COORDINATES: protein motif:HMM:NF012863.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HET9010730.1"
                     /translation="MYRLTNLARVAAVAAVMAVTACSETRDVLGPNPPAGGAMFKSYV
                     AIGNSITAGWQSDGINDDTQRQSYARLLAGQMGTQYHYASLNLPGCQPPVVNFVTQAR
                     VGGAPAGVCALRATTSVTDVLNNVAVPDARVLDPTSPSTVASNALTTFILGGKTQVQR
                     ALDARPTFASIWIGNNDVLVAGYTGYLTPTVVVGATSPGIVSSQAVFQTNYDKMITQL
                     RDSMPGLQGVLIGVAQIPSIPLMTLGSLIYQNRLALAPIVVNPNCNGSTALVTLPKLI
                     PLIRAGLHPGQISCVKGADLADARVGDEFVLDAQERVTLTA"
BASE COUNT          495 a         1171 c          995 g          461 t
ORIGIN      
        1 gcgttgtgga agaagtacag cccgaagtcc accaggctcg ccgacgccgg cgcgccgtcg
       61 atcagcaggt gccgctcgtc gagatgccag ccgcgcgggc gcaccaccag cgtcgccgtg
      121 cgctcgttca gccggtaggc cttgcctccc acgtccatcg ccagcgtgcc gcgcacggcg
      181 tcgacgaggt tgcgctggcc gtcgacgacg ttcgcccagg tgggggagca ggcatcctcg
      241 agatccgcca tgaacacccg ggcgccggag ttgagcgcgt tgatcatcat cttccgctcc
      301 accgggccgg tgatctccac ccggcggtcg gtgaggtcgg ccggcgacga cgccacctgc
      361 cagggcgcct cgcgcaggtg cgccgtctcg gcgggaaagt cgaggggcgc gccggcggga
      421 tgcgccgcca gctcgcggcg gcgcgcctcg cgccggccca tgacctcgcg gcggcggccg
      481 tcgaaggcgc gctgcagcgc cgccacgaag tcgagcgcgt ccggcgtgag gatggcagcc
      541 gcgccgggga ggtcgggcgc ggcgatgacg acggagctcg agtgcgaggc gcgcatggcc
      601 acgggcaaag gtgacgaggg gtagcgccct ttgggggcgc gcgtcctata ttagcgccct
      661 tccagctcga agcaggacgt cacaccaccg aaccgccgcg tcggcacccg gcatacgatc
      721 gtccggccct tcccccggac gccccacagg aggatggaga tgacgcttca ccgtgcctca
      781 cggtacaccc tcgcgctcgc actgctcgcg ctcccggccg cggccggcgc gcaggcattc
      841 gggctcaacg agatcggctc gtgcgcgctc gcgcgcggct tcgccgccac ggcgatgccc
      901 tgcgacgacg gatccagcat ctactggaac cccggtgcga tgcctcgcac ccgtggctgg
      961 tcggtcgccg gcggcgccgc cgtcatccac atcaacggcg acttcatcca ggacacgacc
     1021 ttcacgaggc acgacagcga cgtccccacc gccgtcgtgc cccacctgtt cgtcaactat
     1081 cgcggcgccg gcaagctggc gtacggcctc ggcgtgtacg tcccctacgg cctcacctcc
     1141 cagtgggccg acgacttccc cggccggttc gccgcgaaga aggcgtcgct ccagacgctc
     1201 tacgtgcagc cgaacatcag ctatcagatc acgcccaact ggtccatcgg cggcggtccc
     1261 gtgttcggac attccacggt ggagctgatc cagggcgtgg atctgtcgca gcagcgcacc
     1321 agcgccaccg gtcccacctt cgggcagctc ggcatcccgc tgcgcaccga gttcgcccgg
     1381 gcgaacctca agggctcggc gaccgccttc ggcgtggacc tgggcgtgca cggcaagctg
     1441 acgccggcgt gggacctggg gctgcgcttc ctgtcgcagc tctccttcga ctacaccgac
     1501 gccgacgcca ccttcgaggc gcggaacacg ggcctcgtgc tcgccgccaa caatccgttc
     1561 ggcgtgccgg ccggcacccc ggtcgacgcc ctcgtcgcca gccagttcac caccggcgcc
     1621 ctcgtcccgc agaaggtctc cacccagatc cggcaccccg cgcaggtcca ggtgggcttc
     1681 gcgtattccg gcttccagaa caccacgctc agcgccgagt actcgtacgt cggctggaag
     1741 tcgttcaacc agctgccggt ggacttccag gggggcgcga ccgatcgcgt gctccaggag
     1801 gactacaaca acacctccgg catccggctc ggggccgagc accggctcgt gagcggcctc
     1861 gcgctgcgcg ccggcttcac ggcgaacacc gcggccgccc ccgacgagac ggtcaccccg
     1921 ctcctccccg agcaggaccg ctcgctcgcc ggcctcggta tcggctaccc cttcggtggg
     1981 cgctacgtgc tcgacgcgtc gtacgcgcgg gtcatgacgc ctggccgccg cggtcgcatc
     2041 gacgagcgcg cccccgggag cagtgccacg caggcgatcg ccctgaacag cggctcctac
     2101 atactgaccg ccaacattct ggcgctcacc ctcaaggctt ccttctaatc ccacgcccgg
     2161 agaaatcagg atgtatcgac tgaccaatct cgcccgcgtg gcggcggtcg ccgccgtcat
     2221 ggcggtcacg gcctgctcgg agacacgcga cgtcttgggc cccaacccgc ccgccggcgg
     2281 cgcgatgttc aagagctacg tggcaatcgg caacagcatc accgccggct ggcaaagcga
     2341 cggaatcaac gacgacaccc aacgccagag ctacgcacga ctgctcgccg gtcagatggg
     2401 aacgcagtac cattatgcgt ccctcaactt gccggggtgc cagccgccag tcgtcaactt
     2461 cgtgacacag gcgcgagtcg gcggcgcccc cgccggcgtc tgcgcgctcc gcgccacgac
     2521 ctcggtcacg gacgtcctca acaacgttgc tgtccctgac gcccgcgtgc tggatcccac
     2581 ctcaccgtcg acggtggcgt cgaacgcact gaccaccttc atcctcggtg gcaagacgca
     2641 ggtccagcgg gcgctcgatg ctcggccgac cttcgcgtcg atctggatcg gtaacaacga
     2701 cgtgctcgtc gccggctaca ccgggtatct cacgccgact gtcgtggtcg gcgcaacttc
     2761 gccgggcatc gtgagctcgc aggcggtgtt ccaaaccaac tacgacaaga tgatcacgca
     2821 gctccgcgac agcatgcccg gcctccaggg cgtgctgatc ggagtggccc agatcccgag
     2881 catccccctc atgacgctcg gaagcctcat ctatcagaat cgtctcgcac tggcaccgat
     2941 cgtcgtcaat ccgaactgca acggatccac ggcactcgtc acgctgccca agctcatccc
     3001 gttgatcagg gcggggctgc atcccggcca gatctcctgc gtgaagggcg cggacctcgc
     3061 cgatgcacga gtgggagacg aattcgtgct ggacgcgcag gagcgcgtca cgttgactgc
     3121 cg
//
LOCUS       DASSYW010000187         2505 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_945566, whole genome shotgun sequence.
ACCESSION   DASSYW010000187 DASSYW010000000
VERSION     DASSYW010000187.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2505)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2505)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2505
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_945566"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..767)
                     /locus_tag="VFN38_02905"
     CDS             complement(<1..767)
                     /locus_tag="VFN38_02905"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HET9010731.1"
                     /translation="MNAATPVADAMPIIRARGISKRYELGSTVLRTNSLREAVLASVK
                     SRLASRERRAEARAGREFWALQDVSFDVGRGEVLGVIGRNGAGKSTLLKVLSRITEPT
                     LGRIELRGRIASLLEVGTGFHPELTGRENVYLNGTILGMRKRDIDRKFDEIVAFAEVE
                     RFIDTPVKRYSSGMYVRLAFGVAAHLDPEILVIDEVLAVGDAEFQRKCLGKMGEAASG
                     GRTVIFVSHAMPAVSALTQRVLLLDRGGCLLDGPTPEG"
     gene            complement(785..1717)
                     /locus_tag="VFN38_02910"
     CDS             complement(785..1717)
                     /locus_tag="VFN38_02910"
                     /inference="COORDINATES: protein motif:HMM:NF013245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HET9010732.1"
                     /translation="MSGRPLTGPPAREEAVLEPDAARGAPALSGDHPAGDGHDEPLYV
                     IEARGGLGALDLRELWHYRDLLYFLTWREISIRYKQTLLGFAWAIIQPLTAMVVFTVF
                     LGRLAKVPSDGIPYPVFSYLGLLPWTYFANAVTRSGSSLVANANLLSKVYFPRVLIPV
                     SGVLSAAVDFAIAFVVLIGLMLWYGITPAWTTLWLIPLTLLTALASAGVGMWLASLNV
                     KYRDVQHAVPFLIQVWMYATPVVYPASIVPAKWRTLFALNPLAGIVEAYRAATLGRPL
                     DWSTLGVSTAATLGLLAAGTIAFRRMERQFADIV"
     gene            complement(1714..>2505)
                     /locus_tag="VFN38_02915"
     CDS             complement(1714..>2505)
                     /locus_tag="VFN38_02915"
                     /inference="COORDINATES: protein motif:HMM:NF028171.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyltransferase C-terminal
                     domain-containing protein"
                     /protein_id="HET9010733.1"
                     /translation="RDNTPFTDVYIQPASGDNGTALGAAYYVWNQVLDKPRGFVMEHG
                     YWGPAHAEDEVLATLAARTDEEWDFEVERFATAQETARATARLIADGNVVGWYQGRME
                     WGARALGNRSIVADPRRADMRELINTKIKFREKFRPFAPSIAAEALDEYFVGAVHDPF
                     MVQVYPVRPDKRALLPAITHVDGSGRLQSVRPETNPVYYGLIKEFEKLSGVPVVLNTS
                     FNENEPIVETPAQALDCFLRTHMDVIVLNNTVIRRVRAQRPAGAA"
BASE COUNT          389 a          860 c          886 g          370 t
ORIGIN      
        1 ccctccggcg tggggccgtc gaggaggcag ccgcccctgt cgagcaggag cacgcgctgg
       61 gtcagcgccg agaccgcggg catcgcgtgg ctcacgaaga tcaccgtgcg ccccccgctt
      121 gccgcctcgc ccatcttgcc gaggcacttg cgctggaact ccgcgtcgcc gaccgccagc
      181 acctcgtcga tcacgagaat ctcgggatcg aggtgcgcgg cgacgccgaa cgcgaggcgc
      241 acgtacatcc cgctcgagta gcgcttcacc ggggtgtcga tgaagcgctc cacctcggcg
      301 aaggcgacga tctcgtcgaa cttgcggtcg atgtcgcgct tccgcatgcc gaggatcgtg
      361 ccgttgagat agacgttctc gcggccggtg agctccggat ggaagccggt gcccacctcg
      421 agaaggctgg cgatccgtcc ccgcagctcg atccggccga gggtgggctc ggtgatgcgc
      481 gagagcacct tgaggagcgt gctcttcccc gccccgttgc ggccgatgac gcccagcacc
      541 tctccccgcc cgacgtcgaa gctgacgtcc tggagcgccc agaactcccg cccggcgcga
      601 gcctcggcgc gccgctcgcg cgacgctagc cggctcttca ccgaggccag caccgcctcg
      661 cggagcgagt tcgtacgcag caccgtgctt cccagctcgt agcgcttgga gattccccgg
      721 gcgcggatga tcggcatcgc atccgcgacg ggggtcgcgg cgttcacgag aggagtcgcg
      781 gtactcatac gatgtccgcg aactgccgct ccatgcggcg gaaggcgatc gtgccagcgg
      841 ccagcaggcc gagcgtggcc gcggtggaga cgccgagcgt ggaccagtcg agcggcctgc
      901 cgagcgtggc cgcgcggtag gcctcgacga tcccggcgag gggattgagg gcgaagagcg
      961 tccgccactt cgcggggacg atgctcgccg ggtacaccac cggggtcgcg tacatccaga
     1021 cctggatcag gaacggcacc gcgtgctgca cgtcgcggta cttcacgttg agcgaggcga
     1081 gccacatgcc gacgccggcc gacgcgagcg cggtgagcag cgtcagggga atgagccaga
     1141 gcgtggtcca cgccggcgtg atgccgtacc agagcatcag cccgatgagg acgacgaagg
     1201 cgatggcgaa gtccacggcc gcgctcagca cgccgctcac cgggatgagc acgcgcggga
     1261 agtagacctt gctgagcaga ttcgcgttcg cgacgagact gctgccgcta cgcgtcaccg
     1321 cgttcgcgaa gtacgtccag ggcaggaggc cgaggtacga gaacaccgga tacgggatcc
     1381 cgtcgctcgg caccttggcg agccggccga ggaagacggt gaagacgacc atcgccgtga
     1441 gcggctggat gatcgcccac gcgaagccga gcagcgtctg cttgtagcgg atcgagatct
     1501 cccgccacgt caggaagtag aggagatcgc ggtagtgcca cagctcgcgc aggtcgagcg
     1561 cgccgaggcc tccccgcgcc tcgatcacgt agagcggctc gtcgtgcccg tcgccggccg
     1621 gatggtcgcc ggacagcgca ggcgcgccgc gcgccgcgtc gggctcgagg actgcctcct
     1681 cgcgcgccgg cggccctgtg aggggtcgcc cgctcacgcc gcgccggcgg ggcgctgggc
     1741 gcgcacgcgc cggatgacgg tgttgttcag cacgatcacg tccatgtgcg tgcgcaggaa
     1801 gcagtcgagc gcctgcgccg gcgtctccac gatcggctcg ttctcgttga agctggtgtt
     1861 gaggaccacc ggcaccccgc tcagcttctc gaactccttg atcagaccgt aatacaccgg
     1921 gttggtctcg ggccgcaccg actgcagtcg tccgctgcca tccacgtgcg tgatcgcggg
     1981 caggagggcg cgcttgtcgg gacgtacggg atagacctgg accatgaacg gatcgtgcac
     2041 ggcgccgacg aagtattcgt cgagcgcctc ggcggcgatg gacggcgcga acggacggaa
     2101 cttctcgcgg aacttgatct tggtgttgat cagctcccgc atgtccgcgc ggcgcgggtc
     2161 ggcgacgatg ctgcgattcc cgagcgcgcg cgccccccac tccatgcgcc cctggtacca
     2221 gccgacgacg ttgccgtcgg cgatcaggcg ggccgtggcg cgcgccgtct cctgagcggt
     2281 cgcgaagcgc tcgacctcga agtcccactc ctcgtccgtg cgggcggcca gcgtcgcaag
     2341 cacctcgtcc tcggcgtgcg cgggccccca gtagccgtgc tccatgacga agccacgggg
     2401 cttgtcgagg acctggttcc agacgtagta ggccgccccg agagccgtgc cgttgtcgcc
     2461 cgacgccggc tggatgtaga cgtcggtgaa cggcgtgttg tcgcg
//
LOCUS       DASSYW010000188         2289 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1563167, whole genome shotgun sequence.
ACCESSION   DASSYW010000188 DASSYW010000000
VERSION     DASSYW010000188.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2289)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2289)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2289
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1563167"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..625
                     /locus_tag="VFN38_02920"
     CDS             <1..625
                     /locus_tag="VFN38_02920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010734.1"
                     /translation="LATLDRLPRETGARRTPQRTANRLAALFLEVAVPEVRRTLADLR
                     VSRHQTNWVVALAEAWQRFGGPMAAALATGAPSDEQVRRWLSGIGRLHAGPLLRVAAA
                     RWDAERAAGRAVPGAAAVRTLHRRMRRSMYRDPIQVADLAIGGDELRRLGIPAGPIYA
                     KILQALLERVLEDPARNTPEALLAEVPRIVAAAGGEAGAVTHPSTEQ"
     gene            632..1159
                     /locus_tag="VFN38_02925"
     CDS             632..1159
                     /locus_tag="VFN38_02925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010735.1"
                     /translation="MLFRGKQPESSIWRRFRASNDGFTFSEENGVFTAHVVANAERIV
                     DLFWTLSELLSPAVDLHIDDLRSGRSWKGEALALPDVRDAIARIRLLLARFGGTEVSV
                     FNSEDQLSLNPHLELFIYSRSDKWLYLLEGRGLEERTQLRPKSWKIQRQSFPAAPDLV
                     SAVAAAAERLGLQRV"
     gene            1197..1913
                     /locus_tag="VFN38_02930"
     CDS             1197..1913
                     /locus_tag="VFN38_02930"
                     /inference="COORDINATES: protein motif:HMM:NF014582.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ZIP family metal transporter"
                     /protein_id="HET9010736.1"
                     /translation="MNNTRIVYALAAASANLVGALAVTSRARWSVRALDGMLAFAAGF
                     MISVGLIDLLPEALARGGRSAAVVALGGYLAVHLTQHVIGTHFHFGEETHRVSEAVSL
                     AALVGLLLHTFVDGVAVASGLEVGGAVGALVFLAVILHKVPEGLAISSLFLAAGQGRR
                     RALLAAGALGLATIAGLLLTDHVAALRDHGLALAAGVTLYVGMSNLVPEFRARGGWHL
                     PLAFVGGTATYFLARSIAGV"
     gene            2003..>2289
                     /locus_tag="VFN38_02935"
     CDS             2003..>2289
                     /locus_tag="VFN38_02935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HET9010737.1"
                     /translation="MRPRALEEFAGQAHLLAPGMPLRESIEKGTVTSMVFWGPPGTGK
                     TTLARLIARYTDREFVPFSAVTEGVPRVREIVREAEDRLETGRGTILFADE"
BASE COUNT          285 a          787 c          865 g          352 t
ORIGIN      
        1 gctcgccacc ctcgaccggc tcccgcgcga gaccggcgcg cgtcgcacgc cgcagcgtac
       61 ggccaatcgt ctcgcggcac tcttcctcga ggtcgcggtg cccgaggtgc gacgcacgct
      121 ggcggacctt cgcgtctcgc ggcatcagac gaactgggtg gtcgcgctcg ccgaggcgtg
      181 gcagcggttc gggggaccga tggcggcggc gctggcgacc ggcgcgccga gcgacgagca
      241 ggtgcgacgg tggctgtcgg gcattggccg acttcacgcg gggccgctgc tgcgcgttgc
      301 ggcggcgcgc tgggacgccg agcgcgctgc ggggcgcgcg gtgccgggcg ccgccgcggt
      361 gcggaccctg cacaggcgga tgcgccgcag catgtatcgc gatccgatcc aggtggccga
      421 tctcgccatc ggaggcgacg agctgcggcg cctgggcatc cctgccgggc cgatctatgc
      481 taagattctc caggccctgc tcgagcgcgt gctggaggat ccggcacgga acacgcctga
      541 ggcgctgctc gcggaggtgc cgcgcatcgt cgcggccgcc ggcggggagg caggtgcggt
      601 gactcaccct tcgaccgagc agtagacgcg aatgctattt cgtggcaagc agcccgagtc
      661 gtcgatctgg cggcggttcc gcgccagcaa cgacggcttc accttcagcg aggaaaacgg
      721 cgtcttcacg gcgcacgtcg tcgcgaacgc cgagcggatc gtcgatctgt tctggacgtt
      781 gtcggagctg ctgagcccgg ccgtggacct gcacatcgac gacctgcgca gcggccggag
      841 ctggaagggc gaggcgctcg cgctgccgga cgtccgcgac gccatcgcgc gaattcgcct
      901 gctgctcgcg cggttcgggg gcacggaggt gagcgtgttc aactccgagg atcagctctc
      961 gctcaatccg catctcgagc tgttcatcta ctccaggtcc gacaagtggc tctacctgct
     1021 cgaggggcgc gggctggagg agcgcacgca gctgcggccc aagagctgga agatccagcg
     1081 gcaatcgttt cccgcggcac ccgatctcgt gagcgcggtg gccgcggcgg cggagcggct
     1141 cggcctgcag cgggtgtaac gctgccgcac caccaccgcc gcagcgcgcg ggaggcatga
     1201 acaacacccg gatcgtctac gcgctcgcgg ccgcgagcgc caatctcgtg ggtgcgctcg
     1261 ccgtcacgtc gcgggcgcgc tggagcgtgc gcgcgctcga cgggatgctg gcgttcgcgg
     1321 cgggattcat gatctcggtc ggcctgatcg acctgctgcc cgaggcgctc gcccgcggtg
     1381 gccgttcggc ggccgtcgtg gcactgggcg gctatctggc cgtgcacctg acgcagcacg
     1441 tgatcggcac gcatttccac ttcggcgagg agacgcaccg cgtgtccgag gcggtgtcgc
     1501 tcgcggcgct ggtgggattg ctcctgcaca cgttcgtgga cggcgtggcc gtggcgagcg
     1561 gtctggaggt cggtggcgcc gtcggtgcgc tggtgttcct cgcggtgatc ctgcacaagg
     1621 tgcccgaagg gctcgcgatc tccagcctgt tcctggcagc cggtcaggga cgccggcgcg
     1681 cgctgctcgc tgccggcgcg ctgggcctgg cgacgatcgc gggactgctg ctcaccgatc
     1741 acgtcgccgc gctgcgggat cacgggctcg cgctcgcggc gggcgtgacg ttgtacgtcg
     1801 gcatgtcgaa cctcgtgccg gagttccgcg cacgcggcgg ctggcacctg ccgctcgcct
     1861 tcgtcggcgg cacggcgacg tactttctgg cgcgctcgat cgcgggcgtc tgacgatggc
     1921 cgatcgtcgc ccggggcgcg gacgccccgc cggtccctcg ctcttcgctg ccgcggcgcc
     1981 gccgcagccg ttggcggccc gcatgcgtcc ccgggcgctg gaggagttcg cggggcaggc
     2041 gcacctgctc gcgcccggca tgccgctgcg cgagagcatc gagaagggca ccgtaacgtc
     2101 gatggtgttc tggggaccgc cgggcacggg caagaccacg ctcgcgcgcc tcatcgcgcg
     2161 ctacacggac cgcgagttcg tccccttctc ggcggtgacc gagggcgtgc cgcgggtgcg
     2221 cgagatcgtg cgcgaggcgg aagaccggct ggagacgggg cgcggcacca tcctgttcgc
     2281 cgacgagat
//
LOCUS       DASSYW010000189         2788 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1606559, whole genome shotgun sequence.
ACCESSION   DASSYW010000189 DASSYW010000000
VERSION     DASSYW010000189.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2788)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2788)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2788
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1606559"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            122..1324
                     /locus_tag="VFN38_02940"
     CDS             122..1324
                     /locus_tag="VFN38_02940"
                     /inference="COORDINATES: protein motif:HMM:NF022588.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2911 domain-containing protein"
                     /protein_id="HET9010738.1"
                     /translation="MLDARLRFRRAGAVALVALGSLVACAPALSVPPAAPAGGGTTTL
                     LVRLGSDTIGVEQYTRTPTRMEGVLVQRSPFTTIARYSVDVGANQAPLRAEYSLRRGD
                     GTVITGQMQSLSVRISGDSVTFVAHRSSGDTARVAGTPGQILPYLNGSYALFELALAR
                     LLASGRDSASFSQVPLSWEARGSSALPVKLVGRDSARIAWFGSPLYLRHDGRGGLLWV
                     DGSQTTVKVRVDRVAEMSMDTLAARWSARDQASGALGRISTRDTARTTIGKAHVWVDY
                     GRPALRGRDVWANGVLGDTLWRTGANAATQLGTDADITIGGVVVPAGTYSLWTRVTPG
                     GYELIVNRQAGQWGTEYHPERDLARIPLRVGSVAVPVERFTIALDPQGGLTMTWGTRQ
                     LSAPLGAR"
     gene            1355..1954
                     /locus_tag="VFN38_02945"
     CDS             1355..1954
                     /locus_tag="VFN38_02945"
                     /inference="COORDINATES: protein motif:HMM:NF016270.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF502 domain-containing protein"
                     /protein_id="HET9010739.1"
                     /translation="MSRLFNYFFKGIVFLAPFALTIYVCVRVFTTIDGWLGIPIPGVG
                     FLVTVVLITLFGYLAQGLLTRSVFGVIERILDRLPFVRLLYSSTKDLLNAFVGEQRRF
                     DKPVTVELYAGGQGRAIGFVTQQSLASMGLHDHVTVYLPQSYNFAGQLLIFPTSAVEP
                     LAADSADVMAFIVSGGVTALPALGAARRPTGELPAIRPT"
     gene            complement(1964..>2788)
                     /locus_tag="VFN38_02950"
     CDS             complement(1964..>2788)
                     /locus_tag="VFN38_02950"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HET9010740.1"
                     /translation="VTRAARLRGVRLLPLALFCCACGVSENEETAIGRKSAERIDSSV
                     RLVRDPVINEYVQQLGLSIARTTSRADLDWRFLVVDSREVNAFALPGGLIYVNRGLIE
                     RAERLDELAGALAHEIGHVVRRHSVQQMKKARGANVAVSLTCTLTRICDNTLTQAAIQ
                     VGGAALFASYSRQDEAEADSEAVENVIRAGIDPEGIPTLFLRLIDARASAPLAIETFF
                     ATHPLEARRIESTNRLIDSVDPERLRGLVRDDPSYQELRARLDALPAPPAAPARPR"
BASE COUNT          355 a         1034 c          981 g          418 t
ORIGIN      
        1 aggggcccgc ggcgcgggcg cacgccccgc gaccgggcaa tcgacgggcc agccggaccc
       61 tgcggcgagc ggtgaaccct gctaccattt gtgcaggctc ccgcacccac tcgaggtctc
      121 catgctcgac gcccgtcttc gcttccgccg cgccggcgcg gtcgcgctcg tcgccctcgg
      181 ctcgctcgtc gcctgcgcgc ccgccctctc cgttcctccc gccgcgcccg cgggcggagg
      241 gacgacgacc ctcctcgtcc ggctcggatc ggacaccatt ggcgtggagc agtacacgcg
      301 cacgcccact cgcatggaag gggtgctcgt gcagcggtcg cccttcacga ccatcgcgcg
      361 atacagcgtg gacgtgggcg cgaaccaggc gccgctccgc gccgagtact cgctgcgccg
      421 cggtgacggc accgtcatca ccgggcagat gcagtcgctg tcggtgcgca tctccggcga
      481 ctccgtgacc ttcgtcgccc atcggtccag cggcgacacg gcgcgcgtgg cgggcacgcc
      541 gggccagatc ctcccctatc tcaacggctc gtacgccctg ttcgagctgg cgctcgcgcg
      601 actgctggcg tcggggcgcg acagcgcgtc gttcagccag gtgccgttga gctgggaggc
      661 gcgcggcagc tcggcgctcc ccgtgaagct cgtgggccgc gactccgcgc gcatcgcgtg
      721 gttcggcagc ccgctctacc tgcggcacga cggtcgcggc ggcctcctct gggtggacgg
      781 gagccagacg acggtgaagg tgcgcgtcga ccgcgtggcg gagatgtcga tggacacgct
      841 ggcggcccgg tggtcggcgc gcgatcaggc gagcggcgcg ctgggccgga tctccacccg
      901 cgacaccgcg cgcacgacga tcggcaaggc gcacgtgtgg gtggactacg gacgtcccgc
      961 cctgcgcggc cgcgacgtct gggcgaacgg cgtgctgggt gacaccctct ggcgcaccgg
     1021 cgccaacgcc gccacccagc tcggcaccga cgccgacatc acgatcggcg gcgtcgtcgt
     1081 tcccgccggc acgtactcgc tgtggacgcg cgtcacgccg ggcggctacg agctgatcgt
     1141 caaccggcag gccggccagt ggggcaccga ataccacccc gagcgcgacc tcgcgcgcat
     1201 cccgctgcgc gtgggcagcg tcgcggttcc ggtggagcgg ttcacgatcg cgctcgatcc
     1261 gcaggggggg ctgaccatga cgtggggcac ccggcagctc agcgcgccgc tcggcgcccg
     1321 ctgagtggcc gtccgacgtg tgaaggagcg ggtcgtgagc cgcctgttca actacttctt
     1381 caaggggatc gtgttcctcg cccccttcgc gctcacgatc tacgtgtgcg tgcgggtctt
     1441 caccaccatc gacggctggc tgggcatccc cattcccggg gtgggcttcc tggtgacggt
     1501 ggtgctgatc accctgttcg gctacctcgc ccaggggctg ctcacgcgca gcgtgttcgg
     1561 cgtgatcgag cggatcctcg accggctccc cttcgtgcgg ctgctctact cctccaccaa
     1621 ggatctgctc aacgcgttcg tcggcgagca gcggcggttc gacaagccgg tgacggtgga
     1681 gctgtacgcc ggaggacagg gccgcgcgat cggcttcgtc acgcagcagt cgctcgcgtc
     1741 gatggggctg cacgaccacg tcacggtcta cctgccgcag tcgtacaact tcgccggcca
     1801 gctgctgatc ttcccgacga gcgcggtgga gccgctcgcc gccgacagcg cggacgtgat
     1861 ggcgttcatc gtatcggggg gcgtgaccgc gctgcccgcc cttggcgccg cgcgccgccc
     1921 caccggcgag ctgccggcga tccgccccac ctgagccgcg gcgctatcgc ggacgtgccg
     1981 gggccgccgg cggagcgggc agggcgtcga gccgcgccct gagctcctgg tacgacggat
     2041 cgtccctcac cagcccgcgc agccgctccg ggtcgaccga gtcgatgagg cggttggtgc
     2101 tctcgatccg gcgcgcctcc agcgggtggg tcgcgaagaa ggtctcgatc gccagcggcg
     2161 ccgacgcgcg ggcgtcgatc aggcgcagga acagcgtcgg gatcccctcg gggtcgatgc
     2221 cggcccggat cacgttctcc accgcctccg aatccgcctc cgcttcgtcc tgccggctgt
     2281 agctcgcgaa cagcgccgcg ccgcccacct ggatcgcggc ctgcgtgagg gtgttgtcgc
     2341 agatgcgggt gagcgtgcag gtgaggctca cggcgacgtt ggcgcccctc gccttcttca
     2401 tctgctgcac cgagtgccgg cgcacgacgt gcccgatctc gtgcgccagc gcgcccgcga
     2461 gctcgtcgag ccgctcggcg cgctcgatca ggccccggtt cacgtagatg agcccacccg
     2521 gaagcgcgaa cgcgttcacc tcgcggctgt cgaccacgag gaagcgccag tcgagatcgg
     2581 cgcgcgacgt cgtgcgcgcg atcgagaggc cgagctgctg cacgtactcg ttgatgaccg
     2641 gatcacgcac gaggcgcacg gagctgtcga tccgctcggc gctcttccgg ccgatcgccg
     2701 tctcctcgtt ctcgctcacg ccgcacgcgc agcagaagag ggcgaggggc agcaggcgca
     2761 cgccgcgcag ccgcgccgcc cgcgtcac
//
LOCUS       DASSYW010000190         2002 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_742765, whole genome shotgun sequence.
ACCESSION   DASSYW010000190 DASSYW010000000
VERSION     DASSYW010000190.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2002)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2002)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2002
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_742765"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..521
                     /locus_tag="VFN38_02955"
     CDS             <1..521
                     /locus_tag="VFN38_02955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010741.1"
                     /translation="LRRTATAAAIVAVALYLVPLYRSLREWTMMADVSHKAVRDLRDT
                     ALAAPARSLVIAGAPSRSWDWALPFAARPPFTRTNLYDRVFIISPRSLSCCTAPWFDE
                     TRAAIREWSQSHGRESAIVLRWDPDSGTLSEARSADMPQLTSLVRALADISRPEDLDR
                     NLLRLIDVFTRR"
     gene            642..1223
                     /gene="msrA"
                     /locus_tag="VFN38_02960"
     CDS             642..1223
                     /gene="msrA"
                     /locus_tag="VFN38_02960"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_function: GO:0033744 -
                     L-methionine:thioredoxin-disulfide S-oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HET9010742.1"
                     /translation="MDVPAVHHVLAGARLSPPFPDGLERALFGMGCFWGAEKKFWQLP
                     GVYTTAVGYATGYTPNPTYREVCSGMTGHNEVVLVVFDPRKVAYDTLLRTFWENHDPT
                     QGMRQGNDVGTQYRSGIYVFTDAQREAAERSRDVFQEQLSKRGYGAITTEILPAPEFY
                     YAEDYHQQYLSKNPNGYCGLGGTGVTCPVGVEV"
     gene            complement(1244..1798)
                     /locus_tag="VFN38_02965"
     CDS             complement(1244..1798)
                     /locus_tag="VFN38_02965"
                     /inference="COORDINATES: protein motif:HMM:NF019819.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipocalin family protein"
                     /protein_id="HET9010743.1"
                     /translation="MIRGLNWTSVALVALTLAQPPPKSQPLRPVDEVDLARYAGRWYE
                     IARLPNRFQNNCAGDVIVNYALRTDSRVDVVNQCRQRDGQIEQARGIARRASGAKNDA
                     VLQVRFAPAILSFLPSVWGDYWIIGLGPDYTWAVVGVPSRDYLWILSRTPAMSEGAYE
                     QALEIAKGKGFDTSRLLRTAHTRP"
BASE COUNT          319 a          671 c          679 g          333 t
ORIGIN      
        1 cgttgcgccg caccgccacg gcagccgcca tcgtcgcggt cgccctgtat ctcgtccccc
       61 tttatcgctc gctgcgcgag tggaccatga tggctgacgt gtcgcacaag gcggtccgcg
      121 acctgcgcga cacggcgctc gccgcgccgg cccgcagcct cgtgatcgcc ggcgcgccgt
      181 cgcggagctg ggactgggcg ctgccgttcg cggcgcggcc gccgttcacg cgcacgaacc
      241 tatacgaccg cgtgttcatc atctcgccgc ggtcgctgag ctgctgtacc gcgccgtggt
      301 tcgatgagac acgtgccgcg atccgcgaat ggtcgcagag tcacggccgg gagtcggcta
      361 tcgtgctgcg gtgggatccg gactccggga cgctgagcga agcccgctcc gccgacatgc
      421 cgcagctgac ctcgctcgtc cgcgccctcg ccgacatctc gcggccggag gacctcgaca
      481 ggaacctgct gcggctgata gatgtcttta ctagacgata gacggttgaa ccgaggacta
      541 tcgactagcg actatgggaa actggattct ttggagggct tgtgtctgtt aaaacccgta
      601 tgccgccgaa ggagcaggct ttgccggggc gagccgagcg tatggatgtg ccggcggtgc
      661 accacgtgct cgccggtgcg cggctgtcgc cgccgtttcc ggatgggctg gagcgtgcgc
      721 tcttcggcat gggctgcttc tggggcgcgg agaagaagtt ctggcagttg ccgggcgtct
      781 acacgaccgc cgtcggctac gctaccggct acacaccaaa cccgacctat cgtgaggtct
      841 gcagcggcat gaccggccac aacgaggtcg tgctcgtcgt gttcgatccg cgcaaggtgg
      901 cgtacgacac gctgctcagg acgttctggg agaaccacga cccgacccag ggcatgcgcc
      961 agggcaacga cgtcggcacg cagtatcgat cggggatcta cgtcttcacc gacgcccagc
     1021 gcgaggcggc cgagcggtcg cgcgacgtgt tccaggaaca gctctcgaag cgaggctacg
     1081 gcgcgatcac gacggagatc ctgccggcgc cggagttcta ttacgccgag gactatcacc
     1141 agcagtactt gtcgaagaat cccaacgggt attgcgggct cggcggaacg ggcgtgacct
     1201 gtccggtggg cgtggaagtc tgatttcgcg gttcgcggca cgctcacggg cgcgtatgtg
     1261 cggtccggag caggcggctg gtatcgaacc ccttgccttt cgcgatctcc agcgcctgct
     1321 cgtacgcgcc ctcgctcatc gccggcgtcc gcgacaggat ccagaggtag tcccggctcg
     1381 gcacaccgac gaccgcccag gtgtagtcgg ggccgagccc gatgatccag tagtctcccc
     1441 acacgctggg caggaacgag agaatcgcgg gtgcgaaccg cacctgcaat accgcatcgt
     1501 tctttgcacc cgacgctcgc cgcgcgatgc ccctcgcctg ttcgatctgc ccgtcgcgct
     1561 ggcggcactg attgaccacg tcgacgcgcg agtcggtgcg cagggcgtag ttgacgatga
     1621 cgtcgcccgc gcaattgttc tggaacctgt tcggcaggcg cgcaatctca taccaccgtc
     1681 ccgcgtagcg cgcgaggtcg acctcgtcca ccggccgcag cggctgtgat ttgggcggcg
     1741 gctgcgccag ggtcagcgcg acgagcgcca cggacgtcca gttcaagcca cgaatcatgc
     1801 aacgagcatg aggcaacctg ccccggcgcc gcaagctctg gcagccgtcg cgacgggccg
     1861 gccgtgcgcc gtacggcgcg ccggcgcgtg cgggcgcggg cgtctgtggc tacaatggcg
     1921 cggacggatg cccaaagcca gagcgcacct gttcgaacag gccggcgcca tcgtcgttcg
     1981 ggcgggaaag agcgagcctc gc
//
LOCUS       DASSYW010000191         2076 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1100623, whole genome shotgun sequence.
ACCESSION   DASSYW010000191 DASSYW010000000
VERSION     DASSYW010000191.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2076)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2076)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2076
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1100623"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1018
                     /locus_tag="VFN38_02970"
     CDS             <1..1018
                     /locus_tag="VFN38_02970"
                     /inference="COORDINATES: protein motif:HMM:NF020926.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Zn-binding domain-containing protein"
                     /protein_id="HET9010744.1"
                     /translation="YVQEVLGILQEGGFVHRAAGEDGEGVWQWTNESYPADAVSLRSI
                     SSDNFVVVDTTNGADVIGETSFTSGPSTLHEKAIYLLEGALYQVERLDFEGREAYVRQ
                     IDCDYYTDAITYTKVTPLETFEADERRGGPSGPPTRSHGEVHVSSRVVGFKKIKFYTN
                     ENVGSGELDLPEQQMHTTAYWLTIPQPVMAALPYAADDRRDGVVGLSFAMRQVAQLLL
                     MCDRQDIGVSIGSGEQSDEVDPRAPISLPDEPRIFIYDNYPGGIGFSQPLFAMHADLL
                     RRTREVIASCSCEHGCPTCVGPVGNTGPLAKLAAQRILDRLAQSSLTGAVAPPSLESE
                     LAPF"
     gene            1018..>2076
                     /locus_tag="VFN38_02975"
     CDS             1018..>2076
                     /locus_tag="VFN38_02975"
                     /inference="COORDINATES: protein motif:HMM:NF024873.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease H-like domain-containing protein"
                     /protein_id="HET9010745.1"
                     /translation="MISLKDRLLRDVLKSGAPRVDDDVRSRRSSDRPQDSDSDPAEVL
                     GGAWQEAAGHRFVVVERKYPPGHRHGDVTVADGLPPSDGAWPALDLLARTSCRDRLLF
                     VDLETTGLAGGAGTYAFLVGCAWFDGGSFRVRQYLMSNPMVERSMLGAIAELAGDAGT
                     VVTYNGKTFDLPLIETRYLYHRLETPFSGLPHVDMLHPARRLWRGHASGGDEYGMFDA
                     GGCRLTTLERTQCGFEREGDVPGFEIPDRYFRYVRTGDARPLAGVLEHNRLDLLSLAL
                     LTARAAQLVEEGPPAVRTAREAVGLGRLYQLGGRVDEARRCFALACGLDGSAPSVPLP
                     AGGDGAELRADALSSFARL"
BASE COUNT          302 a          700 c          740 g          334 t
ORIGIN      
        1 ctatgtccag gaagtccttg gcatcctgca agagggcggg ttcgtccatc gagcggccgg
       61 cgaggatggc gaaggggtct ggcagtggac gaacgagtcg tacccggccg atgccgtcag
      121 cttgcgatcg atctcgtcgg acaacttcgt cgtcgtcgac acgacgaatg gtgcagatgt
      181 gatcggtgag acgagcttca ccagcgggcc gtcgacgctg cacgagaagg cgatctatct
      241 gctcgagggc gcgctctacc aggtcgagcg gctcgacttc gaagggcgcg aggcctacgt
      301 gcggcagatc gactgcgact actacaccga cgccatcacc tacacgaagg tcacgccgct
      361 cgagacgttc gaagcggatg aacgtcgcgg cggaccgtca ggtccgccca cacggtccca
      421 cggcgaggtg cacgtctcgt cgcgggtcgt cggcttcaag aagatcaagt tctacacgaa
      481 cgaaaacgtc ggctcgggcg agctggatct gccggagcag cagatgcaca ccacggcgta
      541 ctggctgacc atcccgcagc cggtcatggc cgcgctgccc tacgccgccg atgaccggcg
      601 cgacggcgtg gtggggctgt cgtttgccat gcggcaggtg gcgcagctgc tcttgatgtg
      661 cgaccggcag gacatcggcg tgtcgatcgg cagcggcgag cagagcgacg aagtggatcc
      721 gcgcgcgccg atcagcctgc ccgacgagcc gcgcatcttc atctacgaca actatccggg
      781 cggcatcggg ttcagccagc cgctcttcgc gatgcacgcg gacctgctgc ggcggacgcg
      841 cgaagtgatc gcgagctgca gctgcgagca cggctgcccg acgtgcgtgg gccccgtggg
      901 caacacgggg ccgctcgcga agctcgccgc gcagcgcatc ctcgatcgcc tggcccagtc
      961 gtcgctcact ggtgcggttg cgccgccgtc gctcgaatcc gagctggcgc cattctgatg
     1021 atctcgctca aggatcgcct gcttcgcgac gtcctcaaat cgggcgcccc acgcgtcgac
     1081 gacgacgtac gtagccgccg gtcttcagac cggccccagg actctgattc cgatcccgcc
     1141 gaagtgctcg gcggcgcctg gcaggaggcg gccggccatc gcttcgtggt ggtggagcgg
     1201 aagtatccgc ccggtcaccg ccacggcgac gtgacggtcg ccgacgggct gccgccgtcg
     1261 gacggtgcgt ggccagcgct cgacctgctg gcgcgcacat catgccgcga ccggctgctg
     1321 ttcgtggacc tcgaaacgac cgggctcgcg ggtggcgccg gcacctacgc gtttctcgtc
     1381 ggctgcgcgt ggttcgacgg cgggtcgttc cgtgtccggc agtatctgat gtcgaacccg
     1441 atggtcgagc gctcgatgct cggcgccatc gccgagctcg cgggggatgc cggcacggtg
     1501 gtcacctaca acggcaagac gttcgacctg ccgctcatcg agacgcggta tctgtatcac
     1561 cggctcgaga cgccgttctc cggcctgccg cacgtggaca tgctgcaccc cgcgcgccgg
     1621 ctctggcgcg gccacgcctc cggcggtgac gagtacggca tgttcgacgc aggcggctgc
     1681 cggctgacga cgctcgagcg cacgcagtgc ggcttcgagc gcgagggcga cgtgcccggc
     1741 ttcgagattc cggaccgcta cttccgctat gtgcgcaccg gcgacgcgcg gccgctggcc
     1801 ggcgtgctcg agcacaaccg gctcgatttg ttgtcgctgg cgctgctcac ggcgcgcgcc
     1861 gcgcagctcg tggaagaggg tccgcccgcc gtccgcacgg cgcgggaggc cgtggggctg
     1921 ggccggctgt accagcttgg gggacgggtc gacgaggcgc gccgctgctt cgcgctggcg
     1981 tgcggtctcg atgggagcgc gccgagtgtg ccgctgccgg cgggtggcga cggcgccgag
     2041 ctgcgcgccg acgcgctgtc gtcgttcgcg cgtctg
//
LOCUS       DASSYW010000192         2068 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_632062, whole genome shotgun sequence.
ACCESSION   DASSYW010000192 DASSYW010000000
VERSION     DASSYW010000192.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2068)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2068)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2068
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_632062"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..658)
                     /locus_tag="VFN38_02980"
     CDS             complement(<1..658)
                     /locus_tag="VFN38_02980"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HET9010746.1"
                     /translation="MSAADPFKGKPTNARDFVGYGRTVPQADWPQRARVAVQFVLNYE
                     EGGERSVEDGDAGSETFLSEIVGAPSYPARHMSMESIYEYGSRAGVWRILREFERRSL
                     PLTVFAVARALERNREATAAFVSLGHEIACHGLRWLHYQEVDPATEAAHMREAVAIVR
                     TLTGASPAGWYTGRDSPSTRRLVVEHGGFLYDADSYGDDLPYWTVVRTADGRAVPHLV
                     V"
     gene            complement(655..1434)
                     /locus_tag="VFN38_02985"
     CDS             complement(655..1434)
                     /locus_tag="VFN38_02985"
                     /inference="COORDINATES: protein motif:HMM:NF019349.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HET9010747.1"
                     /translation="MPSPAPPRAPRTRARSASRRPRRERAASGLFGGNGGDDDLVCAT
                     IHEAVLDHRLPPGTKLKEIALAELFGVTRSVIRRSLARLAHLRLVELRPNRGAVVASP
                     TAAEARDLFAARRAIEAAVVASLAAHVTREQLRELRAMTRAEREVYAAGDARRGLKLS
                     VEFHRVLARMAGNAVLAEFLDQLVARTPLVVLAHQGPAIGNACSIDEHSQVVDALADG
                     DGPRAVATMAAHLDALLARLDLERTARRETDLGVLLGVRRA"
     gene            1649..2005
                     /gene="uraH"
                     /locus_tag="VFN38_02990"
     CDS             1649..2005
                     /gene="uraH"
                     /locus_tag="VFN38_02990"
                     /EC_number="3.5.2.17"
                     /inference="COORDINATES: protein motif:HMM:TIGR02962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0019628 - urate catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyisourate hydrolase"
                     /protein_id="HET9010748.1"
                     /translation="MGKLTTHVLDTANGRPAAAVRIRVYRIGDGEQRVLLHDVVTNAD
                     GRCDAPLLEGSRFETGVYELVFGAGAYFGALGSAGPRPPFVGDVVLRFGIADAAQHYH
                     VPLLVSPWSWSTYRGS"
BASE COUNT          296 a          704 c          774 g          294 t
ORIGIN      
        1 ggaccacgag atgcgggacg gcgcggccgt cggcggtgcg cacgacggtc cagtagggaa
       61 ggtcgtcgcc gtaggagtcg gcgtcgtaaa ggaaaccgcc gtgctcgacg acgagccggc
      121 gcgtgctcgg gctgtcgcgt ccggtgtacc aacctgcggg cgaagcgccg gtgagcgtcc
      181 ggacgatcgc caccgcctcg cgcatgtgcg ccgcctcggt cgcgggatcg acttcctggt
      241 agtgaagcca ccgcaacccg tggcaggcga tctcgtgtcc aagcgagacg aacgcggccg
      301 tggcctcgcg gttgcgctcg agcgcgcgcg ccacggcgaa gaccgtgagc ggcagcgagc
      361 gccgctcgaa ctcgcgcagg atgcgccaga cgccggcgcg ggagccgtat tcgtagatcg
      421 actccatgct catgtgccgc gccggatagg agggcgcgcc cacgatctcc gagaggaacg
      481 tctcggagcc ggcgtcgccg tcctcgacgg agcgctcgcc gccttcctcg taattgagga
      541 cgaactgcac ggcgacccgt gcccgctgcg gccagtccgc ctgcgggacg gtcctgccgt
      601 agccgacgaa gtcgcgggcg ttcgtaggtt tccccttgaa tgggtcggcg gcgctcatgc
      661 gcgccgcacg cccagcagca cgccaagatc ggtttcgcgc cgcgcggtgc gctcgaggtc
      721 gagccgggcg aggagggcgt cgagatgcgc cgccatcgtc gcgaccgcgc gcggaccgtc
      781 gccgtcggcc agcgcgtcga cgacctgcga gtgctcgtcg atgctgcacg cgttgccgat
      841 ggcgggcccc tggtgcgcaa gcacgacgag cggcgtgcgc gcgacgagct ggtccaggaa
      901 ctcggccagc accgcgttgc ccgccatccg cgcgagcacg cggtggaatt cgacggacag
      961 cttgagcccg cgccgggcat cgccggcagc gtagacttcg cgctccgcgc gcgtcatggc
     1021 acggagctcg cgcagctgct cgcgggtgac gtgcgccgcg agcgaggcga cgaccgcggc
     1081 ttcgatcgcg cgccgcgccg cgaagagatc ccgcgcctcc gccgccgtcg ggctcgccac
     1141 gaccgcgcct cgattcggtc gcagctcgac caggcgcagg tgcgcgagcc gcgcgagcga
     1201 gcggcggatg acgctgcggg tgacgccgaa gagctcggcc agcgcgatct ccttgagctt
     1261 cgtccccggc ggcagtcggt ggtcgagcac cgcctcgtgg atcgtcgcgc agacgaggtc
     1321 gtcatcgccg ccgttgcctc cgaacagccc ggaagcggcg cgctcgcgcc gcgggcggcg
     1381 gctggcgctg cgggcacgcg tgcgcggggc gcggggcggg gcgggtgacg gcatctcgag
     1441 tgtcgacaag gctttgcgca attgtaaaca atcttcggcg cagcgcaaga gcccctggtc
     1501 gtgcctccgc gtcgcgccgg tcccggaccg gtgtgcgctg cagcatgaaa gacgttccgg
     1561 gtggccggtc aattattgtg cacaaaatgg catcggattg ttgacattga atgggccgcg
     1621 tgcgacagtc cgcggccgga ggggcgccat gggcaagctc acgacgcacg tgctcgatac
     1681 cgcgaacggc cgtccggccg ccgcggtgcg catacgcgtg taccgcatcg gcgatgggga
     1741 gcagcgcgtg ctcctgcacg atgtcgtgac caacgccgac gggcgctgcg acgcgccgtt
     1801 gctcgaaggc agccgcttcg agacgggcgt ctacgagctc gtgttcggcg cgggcgcgta
     1861 tttcggcgcg ctcggcagcg cgggtccgcg tccgccgttc gtcggcgacg tggtgctacg
     1921 attcggcatc gccgacgccg cgcagcatta ccacgtcccg ctcttggttt ctccctggag
     1981 ctggtcgacg taccgcggca gttgaagacg ggcgaggaga cggggatggc gggcaggcgc
     2041 acggcggaga cgggaagcga tcccatcc
//
LOCUS       DASSYW010000193         2039 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_594994, whole genome shotgun sequence.
ACCESSION   DASSYW010000193 DASSYW010000000
VERSION     DASSYW010000193.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2039)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2039)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2039
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_594994"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..190)
                     /locus_tag="VFN38_02995"
     CDS             complement(<1..190)
                     /locus_tag="VFN38_02995"
                     /inference="COORDINATES: protein motif:HMM:NF019976.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HET9010749.1"
                     /translation="MSSDRRQTLGELGETLACDELRRRGYAILERRYRTRYGEIDIVA
                     RHGDVLVFVEVKARAGDAF"
     gene            complement(354..1769)
                     /gene="cysS"
                     /locus_tag="VFN38_03000"
     CDS             complement(354..1769)
                     /gene="cysS"
                     /locus_tag="VFN38_03000"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: protein motif:HMM:TIGR00435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004817 - cysteine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006423 - cysteinyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HET9010750.1"
                     /translation="MLRLYNTLSRQEEPFAPERDNTVRMYACGLTVYNRGHIGSFRTF
                     VCVDVLRRTLKYLCGHQIKGVLNYTDVDDKTIAGAAKAGASLREYTDPWIQAFREDSA
                     CLGLEPPEETPRATDEVNLKAMSDMVLALEHNGHTYRRDGSIYFKITSLPGYGQLARL
                     DTEGMKSGVSVDVDEYSKDDARDFVLWKATQPGEPTWDYGTGPGRPGWHLECSAMALR
                     LLGPGPIDLHAGGIDLVFPHHENEIAQSEGATKQKFARFWFHVEFLLVEHEKMSKSLG
                     NFFTVQDIVERGHRPSALRYLLLSSHYRKQLNFTWAGMDQAEESIGRIMNCLARLESV
                     TGNGQHARVDEAIAAARTGFTSALESDLNTAGALGAVFDFVRDVNAAIDAKEMSAAEA
                     ARVRDLFDHFDQVLGVVSLRRAEDATPPVPVEEIERLIEERKAARARRDFAAADGIRV
                     SLADRGILLEDGPQGTRWKRK"
     gene            complement(1782..>2039)
                     /locus_tag="VFN38_03005"
     CDS             complement(1782..>2039)
                     /locus_tag="VFN38_03005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010751.1"
                     /translation="GMTGTFDFNISCPCDDRLARIITDIVRQAAKDAGRDEAAAAAMA
                     ASAQDFVSGCFADHSQPPIKMHVNNESIKLDAAGRTMSLAL"
BASE COUNT          311 a          711 c          671 g          346 t
ORIGIN      
        1 cgaacgcgtc acccgcccgc gccttcactt ccacgaacac cagcacgtcg ccgtggcgcg
       61 ccacgatgtc gatttcgccg taccgcgtgc ggtagcgccg ttcgagaatt gcgtacccgc
      121 gccgccgcag ttcgtcgcac gccagcgttt cgcccagttc tcccagggtc tgccgtcgat
      181 cactgctcat agcgatcgac ggggtgcaac aggcggacct gaaggtccgc ctctacgggc
      241 cgcctatggc ggcccccaca acggccggct cccacgacgg caagcaggcc taaaggcctg
      301 cagctacgta ctctgaccca cccggcccac ccggcctacc cggcccaccc ggcctatttg
      361 cgtttccagc gcgtaccctg cggaccgtcc tccaacagaa tgccgcggtc ggcgagcgac
      421 acgcggatgc cgtcggcggc ggcgaagtcg cggcgcgcac gcgcggcctt acgctcctcg
      481 atcaggcgct cgatctcctc caccggcacc ggcggcgtgg cgtcttccgc ccgccgcagc
      541 gacacgacgc ccagcacctg gtcgaagtgg tcgaagaggt cgcggacgcg ggcggcctcg
      601 gccgccgaca tctccttggc gtcgatcgcg gcgttgacgt cgcgcacgaa gtcgaagacg
      661 gcaccgagcg cgccggccgt gttgaggtcg ctctcgagcg cgctcgtgaa gccggtccgt
      721 gccgccgcaa tcgcctcgtc cacgcgcgca tgctggccgt tgccggtcac ggattccagt
      781 cgcgccaggc aattcatgat ccggccgatc gactcttcgg cctggtccat tcccgcccat
      841 gtgaagttca actgcttgcg gtagtgcgac gacagcagca ggtagcgcag cgcggacggc
      901 cggtggccgc gctccacgat gtcctgcacc gtgaagaagt tgccgagcga cttcgacatc
      961 ttctcgtgct cgacgagcag gaactcgacg tggaaccaga agcgggcgaa cttctgcttc
     1021 gtggcgccct ccgactgcgc gatctcgttc tcgtggtgcg ggaacacgag gtcgatgccg
     1081 ccggcgtgga ggtcgatcgg tcccggcccg aggaggcgca gcgccatcgc cgagcactcc
     1141 aggtgccagc cgggacggcc cggtccagtg ccgtagtccc acgtcggctc gccaggctgg
     1201 gtggccttcc acaggacgaa gtcgcgggcg tcgtccttcg agtactcgtc cacgtcgacg
     1261 ctgacgcccg atttcatgcc ttcggtatcg aggcgcgcca gctgtccgta gcccggaagc
     1321 gacgtgatct tgaagtagat cgaaccgtcg cgccgatagg tgtggccgtt gtgctcgagg
     1381 gccagcacca tgtcgctcat ggccttgagg ttcacctcgt cggtggcacg cggcgtctcc
     1441 tcgggcggct cgagccccag gcacgccgaa tcctcgcgga acgcctgaat ccacggatcg
     1501 gtgtactcgc gcagcgacgc gccggccttc gccgcgccgg caatcgtctt gtcgtccacg
     1561 tccgtgtagt tcaggacgcc cttgatctga tgaccgcaga ggtatttcag cgtccggcgc
     1621 aggacgtcca cgcagacgaa ggtgcggaag cttccgatgt ggccgcggtt gtagacggtg
     1681 agcccgcagg catacatccg cacggtgttg tcgcgctcgg gggcaaacgg ctcctcctga
     1741 cgcgacagcg tgttgtagag gcgcagcatt cgtctcgggg gtcagagcgc cagcgacatc
     1801 gtgcggccgg cggcgtcgag cttgatggac tcgttgttga cgtgcatctt gatcggcggc
     1861 tgcgaatggt cggcgaagca gccgctcacg aagtcctgcg ccgacgccgc catggccgcc
     1921 gcggcggcct cgtcgcgccc ggcgtccttg gccgcctggc ggacgatatc ggtgatgatg
     1981 cgcgccagcc ggtcatcgca cgggcacgag atgttgaaat cgaaggttcc ggtcatgcc
//
LOCUS       DASSYW010000194         3806 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_906512, whole genome shotgun sequence.
ACCESSION   DASSYW010000194 DASSYW010000000
VERSION     DASSYW010000194.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3806)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3806)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3806
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_906512"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..451)
                     /locus_tag="VFN38_03010"
     CDS             complement(<1..451)
                     /locus_tag="VFN38_03010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010752.1"
                     /translation="MTSITALLLPILVSAVLVFLASSAIHMLSPWHKGDYPRSPREGE
                     VLDALRPIALPPGDYMMPRPSSMAEMKSPEFVERMNRGPVVLMTVFPNGVSRMGGTFV
                     QWFLYLLVVGTFAAYVAGIAVPPGASSMIVARLVFTTAFAGYAIALWQ"
     gene            complement(495..2669)
                     /locus_tag="VFN38_03015"
     CDS             complement(495..2669)
                     /locus_tag="VFN38_03015"
                     /inference="COORDINATES: protein motif:HMM:NF013927.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0017000 - antibiotic biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin acylase family protein"
                     /protein_id="HET9010753.1"
                     /translation="MPKRFLFLAAVLAVSCAPLDAADTDAARWARQARNVTITRDDWG
                     IAHVRGRTDADAVFGLMYAQAEDDFNRVETNYLNAMGRLAEAEGAGAIYRDLRMKLFV
                     NPDSMKAQYAASPPWLKALMVAWADGLNYYLATHRTVTPRVIRRFEPWMALTFSEGSI
                     GGDIETVSLRELEAFYGKRTMGRVQPEWGGVPKEPSGSNGFAIAPSNTATGHAMLLIN
                     PHTSFFFRSEVQVTSDEGLNAYGAVTWGQFFVYQGFNDRAGWMHTSSGVDAVDEYAET
                     VERRGNGYVYRYGAEERPVTATRIVVPFRLRTGLARKEFTVYRTHHGPIVREADGKWI
                     SVKLMQDPVKALTQSYTRTKARGLADFRKSLELHTNSSNNTIFADADGNIAYFHANFV
                     PRRDPRFDWAKPVDGRDPATEWQGIHSVDESPLVVNPSTGWLYNTNNWPYSAAGPDSP
                     KRDRFPAYMDRYEENPRGVHAMRVLQARKDFTLPTLIEAAYDSWLPAFAELVPELVKA
                     YDALPPSDPLRATTGAQVALLRSWDYRWSESSVPTSLAVYWGEELWRRSSADAESEDM
                     SVYEYMGRRLTGAQRLAALAAASDRLVRDFGRWDVPWGRINRFQRLTGDIVQPFDDAK
                     PSIPVGFTSSRWGSLASFGARTWPGTKKLYGTSGNSFVAVVEFGDSVRAKAVSAGGES
                     GHPSSPHFNDQALRYAKGQLRDVYFYPSQLRGHVERRYRPGQ"
     gene            complement(2771..>3806)
                     /locus_tag="VFN38_03020"
     CDS             complement(2771..>3806)
                     /locus_tag="VFN38_03020"
                     /EC_number="1.1.5.-"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016901 - oxidoreductase activity, acting
                     on the CH-OH group of donors, quinone or similar compound
                     as acceptor [Evidence IEA];
                     GO_function: GO:0070968 - pyrroloquinoline quinone binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HET9010754.1"
                     /translation="DVTVVARGLQQPWAVEPLPGGDFLVTEKAGRLRIVSRSGTIGQP
                     IAGVPEVDSHGQGGLLDVALSPTFQSDRTIYWSFAEPRQDGNGTSIARGVLAPDRRSL
                     TGVRVIFRVLPTYNGAAHYGSRLAFGPDGMLYATFGERSDRRMRPYAQRLDSHLGKIV
                     RIAPDGAVPPDNPFVGTAGAQPEIWSVGHRNVQAAAFDARGQLWEVEHGTNGGDELNR
                     IEKGKNYGWAEVGYGVEYSGGPLPGPTARAGTEQPVYYWDPVIAPSGAQFYTGDAFPA
                     WRDNLFVGALKEQRLVRLVIANGRVTGEEHLLADRGHRIRDVRQGPDGALYLVTDDEE
                     GELWRIAPRR"
BASE COUNT          554 a         1340 c         1352 g          560 t
ORIGIN      
        1 gctgccagag cgcgatggcg tagccggcga acgcggtggt gaacacgagc ctggcgacga
       61 tcatcgagga tgcgccgggc gggaccgcga tgccggccac gtaggccgcg aacgtgccga
      121 cgacgagcag gtagaggaac cactgcacga aggtgccgcc catccgcgag acgccgttgg
      181 ggaagaccgt catcagcacg acggggccgc gattcatccg ctcgacgaac tcgggagact
      241 tcatctccgc catgctcgac ggccgcggca tcatgtagtc gcccggcggg agggcgatcg
      301 ggcgcagcgc gtcgagcacc tcgccctcgc gcggcgaccg cggatagtcg cccttgtgcc
      361 agggcgacag catgtggatc gccgagctcg cgaggaacac cagtaccgcc gacaccagga
      421 tgggcagcaa cagcgcggtg atgctcgtca tttcgacctc cggagggtgg tgctgcggat
      481 ggtggaacga tccatcactg accgggccgg taccgccgct cgacgtgccc gcgcagctgc
      541 gacgggtaga agtacacgtc ccgcagctgc cccttcgcgt agcgcagcgc ctggtcgttg
      601 aagtggggcg acgacggatg accgctctcg ccgccggcgc tgaccgcctt cgcccgcacg
      661 ctgtcgccga actcgacgac ggcgacgaag ctgttgccgc tcgtgccgta cagcttcttc
      721 gtgcccggcc aggtccgcgc gccgaacgac gcgagcgacc cccaccgcga ggaggtgaag
      781 cccacgggga tgctcggctt cgcgtcgtcg aacggctgga cgatgtcgcc ggtgagccgc
      841 tggaaccggt tgatccggcc ccacggcacg tcccagcgac cgaagtcgcg gaccaggcgg
      901 tcggacgccg ccgccagcgc cgcgagtcgc tgcgcgccgg tgaggcgcct gcccatgtac
      961 tcgtacaccg acatgtcctc cgattcggcg tcggcgctcg agcggcgcca cagctcctcg
     1021 ccccagtaca cggcgagcga ggtgggcacg gacgactccg accagcggta gtcccagctc
     1081 cgcagcagcg cgacctgggc gcccgtcgtc gcgcgcagcg gatccgacgg cggcagggca
     1141 tcgtacgcct tcacgagctc cggcacgagc tcggcgaagg cgggcagcca gctgtcgtac
     1201 gccgcctcga tgagcgtggg gagggtgaag tccttccgcg cctggaggac gcgcatggcg
     1261 tggacgccgc gcgggttctc ctcgtagcgg tccatgtacg cgggaaagcg gtcgcgcttc
     1321 gggctgtcgg gtcccgccgc ggagtagggc cagttgttcg tgttgtagag ccaccccgtg
     1381 gacgggttga ccaccagggg gctctcgtcc acggagtgga tcccctgcca ctcggtcgcc
     1441 ggatcgcggc cgtccaccgg cttcgcccag tcgaagcgcg ggtcgcgccg cggaacgaag
     1501 ttggcgtgga agtaggcgat gttgccgtcg gcgtcggcga agatggtgtt gttcgacgag
     1561 ttggtgtgga gctcgagcga cttgcggaag tcggcgaggc cgcgcgcctt ggtgcgggtg
     1621 tacgactggg tgagcgcctt caccgggtcc tgcatcagct tgacgctgat ccacttcccg
     1681 tccgcttcgc gcacgatggg accgtgatgc gtgcggtaga cggtgaactc cttccgggcg
     1741 aggccggtgc gcaggcggaa gggcacgacg atgcgcgtcg ccgtcaccgg ccgctcctcg
     1801 gcgccgtagc gatacacgta gccgttgccg cgccgctcca cggtctcggc gtattcgtcc
     1861 accgcatcca ccccgctgga ggtgtgcatc cagccggcgc ggtcgttgaa cccctggtag
     1921 acgaagaact gcccccacgt gacggcgcca tacgcgttca gcccctcgtc gctcgtcacc
     1981 tgcacctcgg agcggaagaa gaacgaggta tggggattga tgaggagcat cgcgtggccg
     2041 gtcgccgtgt tcgacggcgc gatggcgaag ccgttcgagc cggatggctc cttcgggacg
     2101 ccgccccact cgggctgcac ccgtcccatc gtgcgcttgc cgtagaaggc ctcgagctcg
     2161 cgcagcgaca ccgtctcgat gtcgccgccg atgctcccct cgctgaaggt gagggccatc
     2221 cacggctcga agcgcctgat gacgcgcggc gtcaccgtcc ggtgcgtcgc gaggtagtag
     2281 ttcaacccgt cggcccacgc caccatcaac gccttgagcc agggcgggct ggcggcatac
     2341 tgcgccttca tgctgtcggg gttcacgaac agcttcatcc gcaggtcgcg gtagatcgcg
     2401 cccgccccct cggcctccgc cagccggccc atcgcgttga ggtagttggt ctcgacccgg
     2461 ttgaagtcgt cctcggcctg ggcgtacatc aggccgaaca cggcgtccgc gtcggtgcgg
     2521 ccacgcacgt gggcgatgcc ccagtcgtcg cgcgtgatgg tgacgttgcg ggcctggcgc
     2581 gcccagcgcg ccgcgtcggt atcggcggca tccagcggcg cgcaggagac ggcgaggacg
     2641 gcggcgagga agaggaagcg cttcggcatg tctcgggagg cggatgggaa gccccaagat
     2701 ggtcgtccgc cccgcgcttc accagcaacg cgccgccgac gacgccggac gggaggccgc
     2761 ccggcctcgc tcagcgccgg ggcgcgatcc tccacagctc cccctcctcg tcgtcggtga
     2821 cgaggtacag cgcgccgtcg ggcccctgcc gcacgtcgcg gatgcgatgc ccccggtcgg
     2881 cgagcaggtg ctcctcgccg gtgacgcggc cgttcgcgat caccagccgc acgagccgct
     2941 gctccttcag cgcgccgacg aacaggttgt cgcgccaggc cgggaaggca tcgccggtgt
     3001 agaactgcgc gcccgacggc gcgatcaccg gatcccagta gtacaccggc tgctcggtgc
     3061 cggcgcgcgc cgtgggcccg gggagcgggc cgccggaata ctcgacgccg tatcccacct
     3121 ccgcccaccc gtagttcttc cccttctcga tgcgattcaa ctcgtcgccg ccgttggtgc
     3181 cgtgctccac ctcccagagc tggccgcgcg cgtcgaacgc cgcggcctgc acgttccggt
     3241 ggcccaccga ccagatctcg ggctgtgcgc cggccgtgcc gacgaacggg ttgtcggggg
     3301 gcacggcgcc gtcgggcgcg atccggacga tcttgccgag gtggctgtcg agccgctgcg
     3361 cgtagggacg catccgccgg tcggagcgct ccccgaaggt ggcatacagc atcccatccg
     3421 gcccgaaggc gaggcgcgag ccgtagtgcg cggcgccgtt gtaggtgggg agcacgcgga
     3481 agatcacgcg cacgccggtg aggctccgcc ggtcgggcgc cagcacgccc cgcgcgatgc
     3541 tggtgccgtt gccatcctgc cgcggctccg cgaagctcca gtagatggtg cggtccgact
     3601 ggaacgtcgg gctgagcgcc acgtcgagca gcccgccctg gccgtgcgag tccacctccg
     3661 gaacccccgc gatgggctgg ccgatggtgc cgctccgcga cacgatgcgc agccggcccg
     3721 ccttctcggt gacgaggaaa tcgccgccgg gaagcggctc cacggcccac ggctgctgca
     3781 gccccctcgc cacgacggtg acgtcg
//
LOCUS       DASSYW010000195         2096 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_134658, whole genome shotgun sequence.
ACCESSION   DASSYW010000195 DASSYW010000000
VERSION     DASSYW010000195.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2096)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2096)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2096
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_134658"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(52..681)
                     /locus_tag="VFN38_03025"
     CDS             complement(52..681)
                     /locus_tag="VFN38_03025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010755.1"
                     /translation="MNIAVVTPWTDHLELADDYFEAVLPEMEEGDECVVVDNGSSPPL
                     LFGTLQPGENLGFCKGSNLGLRFTERDAVLFLNNDIRLKERGWLDVIRDALEPGVLVG
                     NLRADWHAAVDGKPYPYLDGWCLAGMREDLVAIGGFDEDLMEPAYFSDNLLCLEARAA
                     GMRLRDVRIGLQHKLNATAGPQWDERVQAATKANRARYEARVRELLVAA"
     gene            complement(678..1232)
                     /locus_tag="VFN38_03030"
     CDS             complement(678..1232)
                     /locus_tag="VFN38_03030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010756.1"
                     /translation="MNPRSVSAVLVTKGDHDLSEITDSISAAGVTDIVVWNNAERENL
                     MCYGRYAGIADARNEFIYHQDDDCVVPVADIIAAYDSRTDIAGIVANNREEEEWPLTG
                     LGSVFHRSLADASFDRYIELFGYDEHFLRTCDVVFASQHPYRKIVLGYRELEWSRAPD
                     RMYLQPGHMAARELTLARMQALAA"
     gene            complement(1229..1774)
                     /locus_tag="VFN38_03035"
     CDS             complement(1229..1774)
                     /locus_tag="VFN38_03035"
                     /inference="COORDINATES: protein motif:HMM:NF012360.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010757.1"
                     /translation="MRINVGEFDGWGHVHHTAVIGGPPQHRDYRAGDPIYHPIIASSA
                     WIGAYVTIDSGRGRHTWIGQDVMLMHCCHVGHDTWIGHGTEIAPMSSIGGWVEIGEHV
                     SIAQGVTIKPRLKIGDGAKLGMGAVVIRDVPEGVTVVGNPAAQLLGGKGLREKQAELD
                     GTLHPEEHHDAWAEYRELASQ"
     gene            complement(1771..>2096)
                     /locus_tag="VFN38_03040"
     CDS             complement(1771..>2096)
                     /locus_tag="VFN38_03040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010758.1"
                     /translation="PAAVQTLLAHSGDADIVYSPPLIRYPASWHFFQDPPLIPATALI
                     RRDLFLELGGYEDVTREEDRSFWVKAVERGARFVKVEEPVWAYRLHLPDSAHQNKSFH
                     GGAAT"
BASE COUNT          337 a          699 c          679 g          381 t
ORIGIN      
        1 tcacatcacc ggcagcgaac tttgccatcg ctggcactcc ttcctagatg gtcaggcagc
       61 cacgaggagt tcccgcactc gcgcctcgta gcgtgccctg ttggccttcg tcgctgcctg
      121 cacgcgctcg tcccattgcg ggccggctgt cgcgttcagt ttgtgctgga gcccgatgcg
      181 cacgtctcgc agcctcatcc ccgccgccct cgcctccagg cagagcaggt tgtccgagaa
      241 gtacgcaggc tccatgagat cttcgtcgaa gccgccgatg gcgacgagat cctcgcgcat
      301 ccctgcgagg caccagccgt cgaggtaggg atagggcttc ccgtcgaccg ccgcgtgcca
      361 atcggcgcgg agattcccca ccagcacccc cggctcgagc gcgtcgcgga tcacgtcgag
      421 ccagcctcgc tccttgagcc tgatgtcgtt gttcaaaaac agcaccgcgt cgcgctcggt
      481 gaagcgcaga ccgaggttgg agcctttgca gaagccaagg ttctcgcccg gctgcagcgt
      541 cccgaagaga agcggcgggg aggagccgtt gtcgacgacg acgcactcgt cgccttcctc
      601 catctcgggg agcaccgcct cgaagtagtc gtccgccagt tccaggtggt ctgtccaggg
      661 cgttacgaca gcgatgttca cgccgctagt gcctgcatcc tcgcgagcgt gagttccctc
      721 gcagccatgt gccccggctg caggtacatc cgatccggcg ctcgtgacca ctccagttcg
      781 cggtagccga gcacgatctt gcggtacgga tgctgggacg cgaacacgac gtcgcacgtc
      841 ctgaggaagt gctcgtcgta accgaacagc tcgatgtagc ggtcaaagct ggcatccgcc
      901 aaagagcggt ggaagacgct ccccagtccg gtcagcggcc actcttcctc ctcgcggttg
      961 ttggcgacga tgcccgcgat gtcggttcgg gagtcgtagg cagcgatgat gtccgcgacc
     1021 ggcaccacgc agtcgtcgtc ctggtggtag atgaactcgt tgcgagcgtc tgcgatcccc
     1081 gcgtagcgcc cgtagcacat gaggttctcg cgctcggcgt tgttccagac gacgatgtcg
     1141 gtgacgccgg cggcgctgat ggaatcggtg atctcggaga ggtcgtgatc gcctttcgtg
     1201 accagcaccg cggagaccga gcgcgggttc actgggacgc cagctcccgg tactccgccc
     1261 aggcgtcgtg gtgctcctcg ggatgcaggg ttccgtcgag ctcggcctgc ttctcgcgta
     1321 accctttgcc gccaagcagt tgcgccgccg ggttgccgac gacggtaact ccctcgggaa
     1381 catcgcggat gacgaccgcg cccatcccca gcttggcccc gtcgccgatc ttgagacgag
     1441 gcttgatggt cacgccctgg gcgatggaga cgtgctctcc gatctccacc cagccgccga
     1501 tcgaggacat gggggcgatc tcggtgccgt ggccgatcca ggtgtcgtgt ccgacgtggc
     1561 agcagtgcat cagcatcacg tcctggccga tccaggtgtg cctgccccgc cccgagtcga
     1621 tggtgacgta ggcaccgatc caggccgacg aggcgatgat ggggtggtag atgggatcgc
     1681 ccgctcggta gtcgcggtgc tggggcgggc ctccgatgac ggccgtgtgg tggacgtgtc
     1741 cccagccgtc gaactctcct acgttgattc tcatgtcgct gcacctccgt gaaaggactt
     1801 gttctggtgc gccgagtcgg gtaggtggag ccggtacgcc cacacgggct cctccacctt
     1861 cacgaaccgc gcaccccgct cgactgcctt cacccagaag gaacgatcct cctcgcgggt
     1921 gacgtcctcg tagccgccca gctcgaggaa caggtcacgg cgaatcagcg ccgtcgcggg
     1981 tatcagcggc gggtcctgga agaagtgcca ggaagccgga tagcggatga gcggcggcga
     2041 gtacacgatg tccgcatcgc ccgagtgcgc cagcagcgtc tgtaccgccg caggaa
//
LOCUS       DASSYW010000196         2517 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_79330, whole genome shotgun sequence.
ACCESSION   DASSYW010000196 DASSYW010000000
VERSION     DASSYW010000196.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2517)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2517)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2517
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79330"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..205)
                     /locus_tag="VFN38_03045"
     CDS             complement(<1..205)
                     /locus_tag="VFN38_03045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010759.1"
                     /translation="MKQRISASEAVLAVLVLLHLALSMAHGFAHTRAGVALSAAQMAF
                     VFAVILIGPVAGLILQRLVFPRGG"
     gene            complement(249..1691)
                     /locus_tag="VFN38_03050"
     CDS             complement(249..1691)
                     /locus_tag="VFN38_03050"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HET9010760.1"
                     /translation="MRQRGELARGHRLGPPRRSSKKTQQRLRSTDVADEEHTGSSIHF
                     FTWGSAPHPGSSLAGPLTPLRSSQARRARLRHCSAHTCSAKAPGLDRTVTWWKAGESG
                     LDIGARVPQIGHGLTVSSSPAQPFAGHIVVFIGKLSSLGRRDAETVVVRLGGEVAEHV
                     TSRTTLLVVGDAGRGEASARQPASTPDNVQVISEEEFCRRAGVPTSSQLQRQFYRVRD
                     VRAMYPAIREDHLRYLEKWGLVTPVARTRSDRYYDFSDLAVIRQASAQLEQGTPIRAV
                     LRTMLAARAGQLALDFRMVTDGAAQARVVALERKPSVAPPKLFPEEMPDPQEALAAKY
                     FIEAASIDDAEDPDKQEQAAATYRKALVIDPDLVPAIVNLANIHYARDELIEAQALYE
                     RAIILDPECFEAHFNLGNIHHDLGRYDEALVCYRDAVALNQAYADAHFYLAVTLEKMG
                     HSQEARPHWRMYQRLAPDGEWVELAREFSD"
     gene            1581..>2517
                     /gene="glk"
                     /locus_tag="VFN38_03055"
     CDS             1581..>2517
                     /gene="glk"
                     /locus_tag="VFN38_03055"
                     /EC_number="2.7.1.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004340 - glucokinase activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucokinase"
                     /protein_id="HET9010761.1"
                     /translation="MLLVGDIGGTKTLLGLFRRAARRPEPVTTREFTTLAHPSLTDMV
                     RVFLEDVGPERIEAAAFGVAGVVTRDVARLTNVPWLVEAAEITREFETPSVTLLNDLQ
                     AMAYAVPVLAEDELVPLQRGTRLPEGNMALIAAGTGLGEALLHNVDGRYIPSPSEGGH
                     ADFAPRTPREIELLVELTRLHGRVDYESVASGLGLVNLFRFTHRTTCPVIGEPEDASD
                     IAPRVTAAGMAGTCASCREALEIFISVYGAEAGNLALRSLATGGVYVGGGIAPKVLPA
                     ISDGRFMDAFRSKPPMADLLASMPVHVILNTRTGLL"
BASE COUNT          414 a          817 c          859 g          427 t
ORIGIN      
        1 ctccgccgcg cggaaacacg agtcgctgca ggatcaaccc cgcgactggg ccgatcagga
       61 tcacggcaaa gacgaaggcc atctgggcgg ccgacagcgc cacgcccgcg cgagtgtgtg
      121 cgaacccatg agccatgctg agtgccaggt ggagcaggac gaggaccgcg agaaccgctt
      181 cagacgccga aatgcgttgt ttcatgcccc ctaagacgag ggtccccggc aggatgtgac
      241 aaggagccct agtcgctgaa ctccctggcg agctccaccc actctccgtc cggggcgagg
      301 cgctggtaca ttctccagtg cggtctcgcc tcctgcgagt gccccatctt ctcgagcgtg
      361 acggccagat agaagtgcgc gtcggcgtag gcctggttca gggcgacggc gtcgcggtag
      421 cacacgagcg cctcgtcgta gcggcccagg tcgtgatgga tgttgcccag gttgaagtgc
      481 gcctcgaaac attccgggtc gaggatgatc gcgcgctcgt acagcgcctg cgcttcgatg
      541 agctcgtcgc gcgcgtagtg aatgttggcg aggttcacga tggccggaac gagatccggg
      601 tcgatcacca gcgctttgcg gtaggtcgcc gccgcctgtt cctgcttgtc cggatcctcc
      661 gcatcgtcga tcgacgcggc ctcgatgaag tacttggccg cgagcgcctc ctgcgggtcg
      721 ggcatctcct cgggaaacag ctttggagga gctacggacg gcttgcgttc gagggcgacg
      781 acgcgcgcct gggcggcgcc gtcggtcacc attcggaagt cgagggcaag ctggccggca
      841 cgcgcagcaa gcatggtccg caacaccgcg cgtatcggcg ttccctgttc cagctgtgcg
      901 ctcgcctgcc ggatcaccgc gaggtctgag aagtcatagt agcggtcgct gcgggtcctg
      961 gccaccggcg tgacgagacc ccacttctcc aggtatcgga ggtgatcttc gcgaatcgcc
     1021 gggtacatcg cccgcacatc gcgcacacgg tagaactgcc gctgaagctg ggaactggtc
     1081 ggcacgccgg cgcggcggca aaattcctct tccgagatga cctggacgtt gtcgggcgtg
     1141 ctggccggct gccgggcgga tgcctctcct cggccggcgt caccgaccac gagcagcgtc
     1201 gtgcgcgacg tgacgtgctc ggcgacctcg ccccccaggc ggacgacgac agtttccgcg
     1261 tcgcgacgcc cgagtgacga caacttgcca atgaagacga cgatgtgccc ggcgaacggc
     1321 tgagcgggcg agctcgaaac agtcaaccca tgcccaattt gcggaactcg cgcgccgatg
     1381 tcaagcccgc tctcacccgc cttccaccaa gtgacggtgc ggtctaagcc cggagccttg
     1441 gcggagcacg tgtgagcgga gcagtgacga aggcgcgcac ggcgcgcctg cgacgagcgg
     1501 agtggggtca ggggccccgc gagcgaggag ccggggtgtg gggcggagcc ccacgtaaag
     1561 aagtgtatgc tgctgcccgt atgctcctcg tcggcgacat cggtggaacg aagacgctgc
     1621 tgggtctttt tcgacgagcg gcgcggcggc ccgagccggt gaccacgcgc gagttcacca
     1681 cgctggcgca cccgtcgctg acggacatgg tgcgtgtctt cctggaggat gtggggcctg
     1741 aacgcatcga ggcggctgcc ttcggcgtgg ctggcgttgt cacgcgagat gtcgcgcgac
     1801 tgacgaacgt tccgtggctg gtggaggcag cagagatcac ccgtgaattc gagaccccct
     1861 cggtcacgct gctcaacgat ctccaggcga tggcttacgc cgtcccggtc ctcgcggagg
     1921 acgaactggt accgctgcag cgagggaccc gcctcccgga agggaacatg gcgctcatcg
     1981 ccgctggcac cggcctcggc gaggcgctgt tgcacaatgt ggatggtcga tacatcccct
     2041 ctccgtccga agggggccac gcagactttg cgcctcgcac gccgcgcgag atcgagctgc
     2101 tcgtggagtt gacgcgcctc cacggtcgcg tggactatga atcggtggcc tccggtctcg
     2161 gactggtcaa cctgttccgg ttcacgcatc gcaccacgtg tcccgtcatc ggggagccgg
     2221 aagatgccag cgacatcgcc ccacgcgtga cggcggcggg gatggccggc acctgcgcct
     2281 cctgccgtga ggcgctcgag atcttcatct ccgtctatgg cgccgaagcg ggcaatctgg
     2341 cgttgcgttc gctggccacc ggaggggttt acgtcggcgg cggcattgca ccgaaggtgt
     2401 tgccggcgat ctccgacggt cggttcatgg atgcctttcg cagcaaacca ccgatggccg
     2461 acctcctggc gtcgatgcct gtccacgtga tcctgaacac acggaccggc ctgctcg
//
LOCUS       DASSYW010000197         2321 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1515240, whole genome shotgun sequence.
ACCESSION   DASSYW010000197 DASSYW010000000
VERSION     DASSYW010000197.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2321)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2321)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2321
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1515240"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..218
                     /locus_tag="VFN38_03060"
     CDS             <1..218
                     /locus_tag="VFN38_03060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010762.1"
                     /translation="EMGAKFWFGFIGATLALGLAGLILFLLIDAAWYRWGFLGGFLLI
                     AAILLVIAWILDRRTQKRYAEDYETSG"
     gene            324..719
                     /locus_tag="VFN38_03065"
     CDS             324..719
                     /locus_tag="VFN38_03065"
                     /inference="COORDINATES: protein motif:HMM:NF024788.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SHOCT domain-containing protein"
                     /protein_id="HET9010763.1"
                     /translation="MVASDYPFLDVFWSMLIFFLWVAWIWLLITILTDVFRRHDISGW
                     GKALWTIFVIVAPFLGVLIYLIVESKGMAERNVQTQREYQQMADDHIRSVAGGSDPTE
                     QIAKGKQLLDSGAITAEEFESLKRKALAT"
     gene            895..1932
                     /locus_tag="VFN38_03070"
     CDS             895..1932
                     /locus_tag="VFN38_03070"
                     /inference="COORDINATES: protein motif:HMM:NF012742.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000976 - transcription cis-regulatory
                     region binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HET9010764.1"
                     /translation="MTTIREVAEQSGVSVATVSRVFNGYTDVSKETRQRVLAAARRLD
                     YTPNAAARTLVRRRSALIGVILFTGHQHPDLQHPFFLEVLVGLKHTLGETGYDLLLFA
                     HEQPGVGGGPHAYARRARHHGVDGVIVLAVDDAEEPELKKLLDSGTPVVAVDLVLGGG
                     RASYACSDNVGGARMAVEHLHRLGHRRIAHIGGLAHTKPAADRRLGYRAALQELGLEL
                     RPEYEAQGDFYIETGEASMAELLALPEPPTAVFAASDMMAVGAIKAIEDVGLRCPDDV
                     AVIGFDDIQLAELVSPSLTTIRQDKRGLGAAAARALVQLIEETDTTPPVSVLNVELIV
                     RQSCGAAKEVA"
     gene            2006..>2321
                     /locus_tag="VFN38_03075"
     CDS             2006..>2321
                     /locus_tag="VFN38_03075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010765.1"
                     /translation="MMSKVSKSRSRRTALAATLVVVALAVVGFAATTAAGKSNEDVTL
                     TVSLFGDFGYHDLYKKYEAAHPGVTIKESIQDYAVHHSNLAKNIATNAGAADVEAIEV
                     GFI"
BASE COUNT          387 a          798 c          777 g          359 t
ORIGIN      
        1 gcgaaatggg cgcgaagttc tggttcggct tcatcggcgc gacgctcgcg ctcggcctcg
       61 ccggcctgat cctcttcctg ctgatcgacg cggcctggta ccgctggggc ttcctcgggg
      121 gcttcctcct gatcgccgcg atcctgctgg tgatcgcctg gatcctcgat cgccgcacgc
      181 agaagcgata cgccgaggac tacgagacga gcgggtgacc ccccgccacc gcaccgatca
      241 ccccgcgcgg atgatgcggc gagcaccgac cgtgcggaag catcaccgca caatccccga
      301 caactcaagt ggaggcgcca tcgatggtcg cgagtgacta cccgttcttg gacgtgttct
      361 ggtccatgct catcttcttc ctgtgggtgg catggatctg gctgctgatc acgatcctga
      421 cggacgtctt ccgccggcac gacatctccg gctgggggaa ggcgctctgg acgatcttcg
      481 tgatcgtcgc gcccttcctc ggcgtcctga tctatctgat cgtcgagagc aagggcatgg
      541 ccgagcggaa cgtgcagacg cagcgtgagt accagcagat ggccgacgac cacatccgct
      601 cggtcgccgg cggctccgac ccgaccgaac agatcgcgaa gggcaagcag ctgctcgaca
      661 gcggtgcgat cacggccgag gagttcgaga gcctgaagcg gaaggcgctc gcgacctagg
      721 ctccgccgcg ccacgcagcc gcaggatcga ggaggagggc cgtcgcgccc tcctccttct
      781 ttgtgcccga tcgccaaaaa cggtttcggc gccatatttc attgacagag ccttgactcc
      841 ctgcgattga cggagtatgg tcgaaaacgt tttcggccga accggggaga ccgagtgacg
      901 acgattcgcg aggtggctga gcagagcggg gtctcggtgg cgaccgtctc ccgcgtcttc
      961 aacggctaca ccgacgtcag caaggagacc cggcagcggg tgctcgccgc ggcccgcagg
     1021 ctcgactaca cgccgaacgc agccgcacgc acgctcgtca ggcgccgctc ggccctgatc
     1081 ggcgtcatcc tcttcaccgg ccatcagcac cccgacctgc agcacccgtt cttcctcgag
     1141 gtgctcgtcg gcctgaagca cacgctcggc gagacgggct acgacctcct gctgttcgcc
     1201 cacgagcagc ccggggtcgg cggcggcccg cacgcctatg cgcgccgcgc gcggcaccac
     1261 ggcgtcgacg gcgtcatcgt gctcgccgtc gacgacgcgg aggagccgga gctgaagaag
     1321 ctgctcgact ccggcacgcc cgtggtcgcg gtcgacctgg tgctcggcgg cgggcgcgcg
     1381 agctacgcgt gctccgacaa cgtcggcggc gcgcggatgg cggtcgagca cctgcatcgc
     1441 ctcggccatc gacggatcgc acacatcggc ggcctcgcgc acacgaagcc ggccgccgac
     1501 cggcggctcg ggtaccgcgc ggccctccag gagctcggcc tcgagctgcg ccccgagtac
     1561 gaagcgcaag gcgacttcta catcgagacg ggcgaggcct cgatggccga acttctcgcg
     1621 ctgcccgagc cgccgacagc cgtcttcgcc gcgtcggaca tgatggccgt cggcgcgatc
     1681 aaggcgatcg aggatgtcgg ccttcgctgt cccgacgacg tcgccgtgat cggcttcgac
     1741 gacatccagc tcgccgagct ggtcagtccg tcgctgacga cgatccgaca ggacaagcgc
     1801 ggcctgggcg ccgcggcggc gcgcgcgctc gtccagctga tcgaggagac cgacacgacc
     1861 ccgcccgtgt ccgtgctgaa tgtcgagctg atcgtgcggc agtcctgtgg cgccgcgaag
     1921 gaggtggcgt gaggggtgag ctgagggtgt cccatgtccc gaaggtcaga ccagacacgt
     1981 tccgctgagg agaaggagtc cgaggatgat gagcaaggtg agcaagagca ggtcgcgccg
     2041 tacggcgctc gccgcgacgc tcgtggtcgt ggcactcgcg gtggtcggct tcgcggcgac
     2101 cacggcggcc ggcaagagca acgaggacgt cacgctgact gtcagcctgt tcggcgactt
     2161 cggctaccac gacctctaca agaagtacga ggcggcgcat ccgggcgtca cgatcaagga
     2221 gtcgatccag gactacgccg tccaccactc gaacctcgcc aagaacatcg ccaccaacgc
     2281 cggcgcggcc gacgtcgagg cgatcgaggt cggcttcatc g
//
LOCUS       DASSYW010000198         2120 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_97795, whole genome shotgun sequence.
ACCESSION   DASSYW010000198 DASSYW010000000
VERSION     DASSYW010000198.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2120)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2120)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2120
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_97795"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1089)
                     /locus_tag="VFN38_03080"
     CDS             complement(<1..1089)
                     /locus_tag="VFN38_03080"
                     /inference="COORDINATES: protein motif:HMM:NF028461.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHASE sensor domain-containing protein"
                     /protein_id="HET9010766.1"
                     /translation="MLMPRRGPVTRSIAQRLARINMAASGTALLVAGLTLSVYDFVTF
                     REAQLQNQAVEALIVGSNTITALTFDDPAAAERTLAALRAEPSVEGAALYRPDAQLFA
                     SYLREPSVTPLTLPPAAIQQGEWSRFTGIRTLHVVRPVRLDGMTIGLVYIRSTPTEIT
                     DRLVGYGLIVGTVLIIALVASQLASRVSRRAIAEPLTELAVLARKFSTNHDYSVRARE
                     TGSGELFMLTSAFNEMLEQLQARDRSLQESRDQLEQRVRDRTAALDASNQELEAFCYS
                     VSHDLRSPLRAIDGFSQALLEDLEGKLDDEAVGHLARIRAATQRMAALIDDLLSLSRI
                     TRTDLVVKRVDLSAMARAVCDELAAVQPD"
     gene            complement(1089..1640)
                     /locus_tag="VFN38_03085"
     CDS             complement(1089..1640)
                     /locus_tag="VFN38_03085"
                     /inference="COORDINATES: protein motif:HMM:NF025069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfiR family protein"
                     /protein_id="HET9010767.1"
                     /translation="MASLDRAWRAAVAMAVAAVLASPVLAQRPAEYQVKAAYLYGFGR
                     FVEWPAGAAVAGDGAFVLCVLGDDPFGRLLDQAVEGGLLQKQPVSVRRIDRPEDGASC
                     DTLFVSASEEPRLPRILSVLARRPVLTVGDSPDFAQRGGMIGFSLEGSRVRFTVNLVA
                     AQDAGLMLQSELLRVAAAVLRGR"
     gene            complement(1628..>2120)
                     /locus_tag="VFN38_03090"
     CDS             complement(1628..>2120)
                     /locus_tag="VFN38_03090"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HET9010768.1"
                     /translation="SVQTSPIPHLLFSSTYQNGIEAVSDGFEVAGDFRPTSWLRTRGA
                     YALFSIDTRTRPGYPEDQLNLRAYQDSVPRHQGWAQASLTLPGRLEVDYVQRAVGRLV
                     FNGVPSYVTGDARVGWEVAKGVTVAVAGQNLWAPNHVEFGRNDFEPAGIRRSVHASVT
                     WRR"
BASE COUNT          340 a          750 c          732 g          298 t
ORIGIN      
        1 gtcaggctgc acggccgcca gctcgtcgca gacggcgcgc gccatcgccg acaggtccac
       61 gcgcttcacc acgaggtcgg tgcgcgtgat gcgcgacagg ctcaggaggt cgtcgatgag
      121 cgccgccata cgctgcgtcg cggcgcggat ccgcgccaga tgtccgacgg cctcgtcgtc
      181 caacttccct tccagatctt cgagcagcgc ctggctgaaa ccgtcgatgg cgcgcagcgg
      241 cgagcggagg tcgtgtgaca ccgagtagca gaaggcctcg agctcctggt tcgaggcgtc
      301 cagcgcggcg gtgcggtcgc ggacgcgctg ttcgagctgg tcgcggcttt cctgcagcga
      361 acggtcgcgg gcctggagct gctcgagcat ctcgttgaag gcgctcgtca gcatgaacaa
      421 ctcccccgag cccgtctcgc gcgcccggac ggaatagtcg tgattggtcg agaacttgcg
      481 ggccagcacc gccagctcgg tgagcggttc ggcgatggcg cggcgcgaca cgcgcgacgc
      541 gagctgcgac gccacgagcg cgatgatcag caccgtgccg acgatcagcc cgtaaccaac
      601 cagccgatcc gtgatttccg tcggagtgga gcggatgtac acgaggccga tcgtcatgcc
      661 gtcgagccgc acggggcgca ccacgtgcag cgtgcggatc ccggtgaagc gggaccactc
      721 gccctgctgg attgccgcgg gaggcaacgt gagcggcgtg acggacggtt cgcgaaggta
      781 cgacgcaaag agctgggcgt ccggccggta caacgcggcg ccttcgacgc tgggctcggc
      841 ccgcaacgcg gccagggtgc gctcggccgc ggcgggatcg tcgaacgtca gcgcggtgat
      901 cgtgttcgag ccgacgatca gcgcttccac cgcctggttc tggagctgcg cttcccggaa
      961 ggtgacgaag tcgtagacgc tgagcgtcag gcccgccacg agcagcgcgg ttccgctggc
     1021 ggccatgttg atgcgcgcca gccgctgggc gatcgaccgc gtgaccgggc cccggcgcgg
     1081 catcagcatc agcgtcctcg cagcaccgcc gcggcgacgc gcagcagctc cgactgcagc
     1141 atgaggccgg cgtcctgggc tgccaccagg ttgaccgtga agcgcacacg gctcccctcg
     1201 agcgagaacc cgatcatccc gccgcgctgc gcgaagtccg gcgagtcgcc gacggtcagt
     1261 accggccgcc gggccagcac ggacagaatg cgcggcagcc gtggctcctc cgacgcgctc
     1321 acgaacagcg tgtcgcacga cgcgccgtct tccgggcggt cgatgcggcg cacgctcacc
     1381 ggctgcttct ggagcaaccc gccctcgacg gcctgatcga gcaggcggcc gaacggatca
     1441 tcaccgagca cgcacagcac gaaggcgccg tcgccggcca ccgccgcacc ggccggccac
     1501 tccacgaagc ggccgaagcc gtagagatac gcagccttga cctggtactc ggccggccgc
     1561 tgggccagca ccggcgaggc cagcacggcc gcgaccgcca tcgcgacggc ggcccgccac
     1621 gcgcggtcta gcgacgccat gtgaccgacg cgtggacgct tcgccggatg ccggccggct
     1681 cgaagtcgtt ccggccaaac tcgacgtgat tgggggccca caagttctgc ccagccacag
     1741 ccaccgttac gcccttggcc acctcccagc cgacgcgcgc gtctcccgtc acgtagctcg
     1801 gcacgccgtt gaacacgagg cggccgaccg cgcgctgcac gtaatccacc tcgagacgcc
     1861 cgggcagggt gagcgatgcc tgtgcccatc cctgatgacg cggcactgag tcttgatacg
     1921 cccggaggtt gagttggtcc tccggatagc ccggccgcgt cctcgtgtcg atgctgaaga
     1981 gggcgtacgc gcctcgtgtc cgcagccacg acgtgggccg gaagtcgccg gccacttcga
     2041 acccgtcgct cacggcctcg atgccgttct gatacgtgct gctgaagagc agatgcggaa
     2101 tcggcgaggt ttgcacggac
//
LOCUS       DASSYW010000199         2709 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_267265, whole genome shotgun sequence.
ACCESSION   DASSYW010000199 DASSYW010000000
VERSION     DASSYW010000199.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2709)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2709)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2709
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_267265"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..919
                     /locus_tag="VFN38_03095"
     CDS             <1..919
                     /locus_tag="VFN38_03095"
                     /inference="COORDINATES: protein motif:HMM:NF025067.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF4173 domain-containing protein"
                     /protein_id="HET9010769.1"
                     /translation="HRPPERLPLALGMLDVTTALGVLNVLFAVYVATQLGWFFGGERF
                     LQARTGLTAAEYARQGFFQMVWVVLLVVPLLLGTRAALRPGRELERRHTALALPLLAL
                     LGVMIVSAMLRMRLYVHYYGLTTDRFYPLVFMGWLAVVLVWLALTVLRDAGRPFAAGA
                     VVTGLATLAALNVAVPDAIVARVNVDRARRGVSEAAPQLDIAHLARLGGEAVPYAIAA
                     VLAPPASAPGSIERLALDEGRCEAASLLLRRWRRHQESISRHELDGTEWRRWNRGEAT
                     AARAVGAHSTELRAVQHAACPRGASRRYR"
     gene            complement(910..1410)
                     /locus_tag="VFN38_03100"
     CDS             complement(910..1410)
                     /locus_tag="VFN38_03100"
                     /inference="COORDINATES: protein motif:HMM:NF003819.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YajQ family cyclic di-GMP-binding protein"
                     /protein_id="HET9010770.1"
                     /translation="MAQAASFDVTTGVDLQEVDNAINQAQKEIAQRYDFKGSKASIDF
                     KRAESLIALVADSDFQMTALFDVVQSKLIKRGVPVKNLDVGEVKQAAGDTVRRDVKLK
                     MELDGETAKKVAAAIKDAKLKKVQASIQGEQVRVSGPSRDDLQEAIALLKSKDFGVQL
                     QFGNYR"
     gene            complement(1490..2350)
                     /locus_tag="VFN38_03105"
     CDS             complement(1490..2350)
                     /locus_tag="VFN38_03105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD/SigA"
                     /protein_id="HET9010771.1"
                     /translation="MATTPNSKKSSFEEGSLDQYLRHISIYPLITREDEVALAQKIRT
                     GDQEALDKLVRSNLRFVVSVAKKYQNQGVSLSDLINEGNLGLIRAAHKFDETKGIKFI
                     SYAVWWIRQAILQALAEQSRIVRVPLNRAGTLHRIGKRASFLLQELGREATHAEIAEG
                     MDITEEEVAKTMSISQTHLSLDAPMTPGEDNKLLDYLPDNLNPTPDEQTFEKALTESL
                     EEALSHLKEREAKILRLYFGLDGEEPMTLEQIGSLLGITRERVRQIKEKALSRLRHVS
                     RARALESYLG"
     gene            complement(2441..>2709)
                     /gene="lepB"
                     /locus_tag="VFN38_03110"
     CDS             complement(2441..>2709)
                     /gene="lepB"
                     /locus_tag="VFN38_03110"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: protein motif:HMM:TIGR02227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HET9010772.1"
                     /translation="FLVRTADAAVGYHPSRNNWGPLVVPQEQYFVLGDNRDNSLDSRY
                     WGFVPDSLLRGRPEVVYFSFAPDSAVDLAWLTHVRWTRLGERVH"
BASE COUNT          368 a          930 c          923 g          488 t
ORIGIN      
        1 gcatcgtccg cccgagcgac tccctctcgc cctcggcatg ctggacgtca cgaccgcgct
       61 cggcgtgctg aacgtcctgt tcgcggtcta cgtggcgacg cagctcggct ggttcttcgg
      121 cggcgagcgc ttcctccagg cgcgcaccgg attgaccgcg gcggagtacg cgcgacaggg
      181 cttcttccag atggtctggg tggtgctgct cgtcgtgccg ctgctcctgg gcacgcgtgc
      241 cgcgctgcgg ccgggccgcg agctcgagcg gcggcacacg gcgctcgcgc tgcccctcct
      301 cgcgctcctc ggcgtgatga tcgtctcggc gatgctgcgg atgcgcctgt acgtccacta
      361 ctacgggctc accaccgacc ggttctatcc gctcgtgttc atgggatggc tcgcggtggt
      421 gctcgtgtgg ctcgcgctca ccgtcctgcg cgatgccggg cgcccgttcg ccgccggcgc
      481 ggtggtcacc ggactggcga cgctggccgc gctgaacgtt gccgtgcccg atgccatcgt
      541 ggcgcgggtg aacgtcgacc gcgcgcggcg gggcgtgtcg gaggcggccc cgcagctcga
      601 catcgctcat ctcgcccggc tcgggggaga agccgtgccc tacgccatcg ccgcggtgct
      661 cgcgccgccg gccagcgctc ccggctccat cgagcgcctg gcgctggacg aggggcgatg
      721 cgaggcggcg agcctgctgc tccgccgctg gcgtcggcac caggagtcga tcagccgcca
      781 cgagctcgat ggcacggagt ggcggcgatg gaatcgcggc gaagcgacgg cggcgcgggc
      841 cgtcggcgcg cactcaaccg agctgcgcgc ggtgcagcat gccgcctgcc cgcgtggcgc
      901 gagccgccgc taccggtagt tcccgaactg gagctgcacg ccgaagtcct tgctcttcag
      961 cagcgcgatg gcttcctgga ggtcgtcgcg cgacggtccg ctcacgcgca cctgctcgcc
     1021 ctggatggac gcctgcacct tcttgagctt cgcgtccttg atcgccgccg ccaccttctt
     1081 cgccgtctcc ccgtccagct ccatcttgag cttcacgtcg cggcgcaccg tatcgcccgc
     1141 cgcctgcttc acctcgccca cgtcgaggtt cttcaccggc accccgcgct tgatcagctt
     1201 ggactgcacg acgtcgaaca gggcggtcat ctggaaatcg ctgtcggcca cgagggcgat
     1261 cagcgactcg gcgcgcttga agtcgatgga cgccttggag cccttgaagt cgtagcgctg
     1321 ggcgatctcc ttctgcgcct ggttgatcgc gttgtcgact tcctgaagat ccacgccggt
     1381 ggtgacgtcg aatgaggctg cctgggccat gcggaaccgg gaatggttga ccgtgagcgg
     1441 tgaacgatga accgtgaacg gtgatcgtga tccgttcacc gctcggcgtt cacccgaggt
     1501 acgactccag cgcccgggcc cgcgacacgt gccggagccg cgacagcgcc ttctccttga
     1561 tctgccgcac ccgctcgcgc gtgatgccca gcaggctgcc gatctgctcc agcgtcatcg
     1621 gctcctcgcc gtccagcccg aagtagagcc gcaggatctt cgcctcgcgc tccttcaggt
     1681 gcgagagcgc ctcctcgagc gactccgtca gcgccttctc gaacgtctgc tcgtccggcg
     1741 tcggattgag gttgtcgggg aggtagtcga ggagcttgtt gtcctcgccc ggcgtcatcg
     1801 gggcatcgag cgagaggtgc gtctgcgaga tcgacatcgt cttcgcgact tcctcctcgg
     1861 tgatgtccat cccctcggcg atctcggcgt gcgtcgcctc gcggccgagc tcctggagca
     1921 ggaagctcgc gcgcttgccg atgcggtgca gcgtgccggc gcggttcagc ggcacgcgca
     1981 cgatgcggct ctgctccgcc agcgcctgga ggatcgcctg gcggatccac cacacggcgt
     2041 acgagatgaa cttgatcccc ttcgtctcgt cgaacttgtg cgcggcgcgg atgaggccga
     2101 ggttgccctc gttgatcagg tcggagagcg acacgccctg gttctggtac ttcttcgcga
     2161 cgctgacgac gaagcgcagg ttggagcgca cgagcttgtc gagcgcttcc tggtcgccgg
     2221 tgcggatctt ctgcgcgagg gccacctcat cttcccgcgt gatgagcgga tagatgctga
     2281 tgtgccgcag atactgatcg agcgagccct cttcgaacga cgacttcttg ctgttcggag
     2341 tggtggccat acgggcggtt cctggggacg gcggccccgc cgcggatggc gcagcgagcg
     2401 gcgaggcggg aggcgaccgg ctgtggtcgg aagtgctata tcaatgcacg cgctcgccga
     2461 gccgcgtcca tcggacgtgg gtcagccagg cgagatcgac ggcggagtcc ggagcgaaac
     2521 tgaagtacac gacctcgggg cgcccgcgca gcagggagtc ggggacgaat ccccaatacc
     2581 ggctgtcgag cgagttgtcc cgattgtcgc ccaacacgaa gtactgctcc tgagggacga
     2641 ccaacggccc ccagttgttt cgcgatggat gataccccac ggccgcatcc gccgtgcgca
     2701 cgagaaagt
//
LOCUS       DASSYW010000200         2698 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_467222, whole genome shotgun sequence.
ACCESSION   DASSYW010000200 DASSYW010000000
VERSION     DASSYW010000200.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2698)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2698)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2698
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_467222"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..792)
                     /locus_tag="VFN38_03115"
     CDS             complement(<1..792)
                     /locus_tag="VFN38_03115"
                     /inference="COORDINATES: protein motif:HMM:NF017072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010773.1"
                     /translation="MRIAIPLETAAGEHRVALTPDSAGRLVKSGHEVRIQAGAGTRAG
                     FPDSAYEAVGAIVVDAAALYADAALVCRVQPPTTAEVAKLPIGSTLLALLAPSRNGPL
                     LATLAARNVTALALEQVPRITRAQSMDVLSSQSTVAGYKAVLVGASALPKFLPMLTTA
                     AGNVSPARVFVIGAGVAGLQAIATARRLGGVVSAFDVRPAAREQVQSLGATFVAAELV
                     GAGAETSGGYARAQSEDEAKRTREALANHLREVDLVITTAQIPGRP"
     gene            906..2630
                     /locus_tag="VFN38_03120"
     CDS             906..2630
                     /locus_tag="VFN38_03120"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HET9010774.1"
                     /translation="MSPARPAAALLSGVLLAVSAACTAQMSTPARAAQGGEPPLKLAP
                     RPTTAAITPADLMTRLYVFADDSMMGRQVGTVYNLKGTAYIEREVRRLGLVPAGTDGY
                     FQDLPLYTYSTDSATVVRVAGQTLAPGADYLVYAPGEKRIALDAAPVVHGGSAADSAT
                     WPSADAAAGKLVVLTVPTTSNPIRVFSGSSRFGRAAAVVVVSLDRLAPNIQRFIAHRT
                     ALTPASAPPAGPPTIFVTPRVASLLFGTAADAVAPGTAGRALEGTLVLRQAQAPGRNV
                     VAILPGSDPALRNEYVAIGAHNDHIGFNTNPVDHDSIRAFNMVARVQGADSPRPTSLT
                     AEQAARIRAITDSLHALHGARRDSINNGADDDGSGSVSVLEIAQALASSPVKPKRSIL
                     FVWHSGEEAGLWGAQHFTDHPTVPRENIVAQLNMDMVGRGAATDVTGELKEGGLARGG
                     PGYVQLIGSRRLSTELGDLIEEVNRTNALGLAFDYSQDANGHPQNIYCRSDHYEYARY
                     GIPIVFFTTGGHSDYHQVTDEPQYIDYGRMAQVATLVRDAAVRVANLDHRVVVDKPKP
                     DPNGRCRQ"
BASE COUNT          389 a         1028 c          935 g          346 t
ORIGIN      
        1 gggccggccg gggatctgcg cggtcgtgat cacgagatcc acttcgcgca gatggttggc
       61 gagcgcctcg cgcgtgcgct tcgcctcgtc ctcgctctgg gcgcgggcgt agccgccgga
      121 ggtctccgcg cccgccccca ccagctcggc ggccacgaag gtggcgccga gcgactgcac
      181 ctgctcgcgt gccgcggggc ggacgtcgaa cgccgacacg accccgccca gccgccgcgc
      241 ggtggcgatc gcctggagcc ccgccacgcc ggcgccgatg acgaacaccc tggccggcga
      301 cacgttgccc gccgcggtgg tgagcatcgg caggaacttc ggcagcgcgc tcgcccccac
      361 cagcaccgcc ttgtagcccg ccaccgtgct ctgcgacgac agcacgtcca tcgactgcgc
      421 ccgcgtgatg cgcggcacct gctcgagggc gagcgcggtg acgttgcgcg ccgcgagcgt
      481 ggcgagcaac ggcccgttgc gcgagggagc gagcagcgcc agcagcgtgg agccgatggg
      541 gagcttcgcg acttccgccg tggtgggggg ctgcacgcgg cacaccagcg cggcgtccgc
      601 gtacagcgcc gccgcatcca cgacgatcgc gcccaccgcc tcgtaggcgg aatcgggaaa
      661 gccggcgcgg gtgccggcgc cggcttgaat gcggacctcg tggccacttt tcaccagccg
      721 ccccgcgctg tcgggcgtca gggcgacccg gtgctcgccc gcggcggtct ccagaggaat
      781 ggcgattcgc atggggaaaa acctagcgcg agagcggggg gaagctagac gtcgcgaccg
      841 gtggtccaac ggtgcgccgg cggcggctgt ctcataaatt cacgtctcac cctcggagag
      901 tcagcatgtc gcctgctcgt cccgccgccg cgctcctgtc cggcgtcctc ctcgcagtat
      961 cggccgcctg cacggcgcag atgagcaccc ccgcgcgcgc ggcccagggc ggggagcccc
     1021 ccctcaagct cgcgccgcgt cccaccaccg cggccatcac gccggccgac ctgatgacgc
     1081 ggctctacgt gttcgccgac gactccatga tggggcgcca ggtgggcacg gtgtacaacc
     1141 tgaaggggac ggcctacatc gagcgggagg tgcgccggct cggcctcgtg cccgccggca
     1201 ccgacggcta cttccaggac ctgcccctct acacctactc caccgacagc gcgacggtgg
     1261 tgcgggtcgc cggccagacg ctggccccgg gcgccgacta cctcgtctac gcgccgggcg
     1321 agaagcggat cgccctcgac gccgcgccgg tggtccacgg cgggtcggcg gcggattccg
     1381 ccacctggcc ctccgccgac gccgccgcgg ggaagctcgt cgtgctcacg gtgccgacga
     1441 cgagcaaccc gatccgcgtc ttctcgggct cgtcgcgctt cgggcgcgcg gcggccgtcg
     1501 tcgtcgtgtc gctcgaccgc ctcgcgccga acatccagcg gttcatcgcg caccgcacgg
     1561 cgctcacccc ggcgtcggcc ccgcccgccg gcccgccgac catcttcgtc accccccgcg
     1621 tcgccagcct gctgttcggc acggccgccg acgccgtcgc cccgggcacc gccggccgcg
     1681 cgctggaggg aacgctggtg ctgcgccagg cccaggcgcc cggacgcaac gtcgtggcga
     1741 tcctgccggg cagcgatccg gcgctccgga acgagtacgt ggccatcggc gcccacaacg
     1801 accacatcgg cttcaacacg aacccggtgg accacgattc catccgggcc ttcaacatgg
     1861 tggcgcgagt gcagggggcc gacagccctc gccccacgag cctcaccgcg gagcaggcgg
     1921 cgcgcatccg cgccatcacc gacagcctgc acgccctgca cggcgcgcgt cgcgattcca
     1981 tcaacaacgg cgccgacgac gacggctccg gctcggtgag cgtcctcgag atcgcccagg
     2041 cgctggcgtc gtcgccggtg aagcccaagc ggtcgatcct cttcgtctgg cacagtggcg
     2101 aggaggccgg actgtggggc gcccagcact tcaccgacca tcccaccgtg ccgcgcgaga
     2161 acatcgtcgc ccagctcaac atggacatgg tgggccgcgg cgccgccacc gacgtcaccg
     2221 gtgagctcaa ggagggcggg ctcgcccgag gcggcccggg ttacgtgcag ctcatcggct
     2281 cgcgccggct gtccaccgag ctgggtgacc tgatcgagga ggtgaaccgc accaacgcgc
     2341 tggggctcgc cttcgactac tcgcaggatg cgaacgggca cccgcagaac atctactgcc
     2401 gcagcgacca ctacgagtac gcgcgctacg gcatccccat cgtgttcttc accactggcg
     2461 gccactcgga ctaccatcag gtgaccgacg agccgcagta catcgactac gggcggatgg
     2521 cgcaggtggc gacgctcgtg cgcgacgcgg cggtgagggt ggcgaacctc gaccatcgcg
     2581 tcgtggtgga caagccgaag cccgatccca acgggcgatg ccggcagtag cggcagggcg
     2641 cagcgagggg tgacgcacgg ggcgcgtgcc gggatgtcca tccggcacgc gccctgcc
//
LOCUS       DASSYW010000201         2269 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1678097, whole genome shotgun sequence.
ACCESSION   DASSYW010000201 DASSYW010000000
VERSION     DASSYW010000201.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2269)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2269)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2269
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1678097"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..965
                     /locus_tag="VFN38_03125"
     CDS             <1..965
                     /locus_tag="VFN38_03125"
                     /inference="COORDINATES: protein motif:HMM:NF014600.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HET9010775.1"
                     /translation="KVTVRDSTPVRVGERARRVRAAASATAELAPSAGGALATQASGG
                     GYSGPLAYRQGKPMRPDVAMAFDRMAAAAGAAGVRLMVVSGFRSDAEQAALFARNPNP
                     RWVAPPGRSLHRLGTELDLGPNAAYGWLARNAGRFGFVQRYSWEAWHFGYTRNPGTSS
                     VGFGTRGGDGRATRAAQSFVPPRYAPLLARAAQRWQVSAELLAAQIYAESNFNPFARS
                     GAGALGIAQFMPGTARAYGVSNPFDAADAIDGQAHLMHDLLARFASVPLALAAYNAGP
                     GAVAACGCIPPYAETQAYVAKIVGLLGGAGVAGGLGAMEVRLVE"
     gene            1031..2008
                     /locus_tag="VFN38_03130"
     CDS             1031..2008
                     /locus_tag="VFN38_03130"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HET9010776.1"
                     /translation="MKVFVAGATGALGKQLVPRLVAGGHEVVGMTRTPLKLKLVRELG
                     ATGVVADALDPGAVARAVGEAEPDVIVHQLTALSGSLDLRHFDRDFAPTNRLRTEGTD
                     NLLAAGRAAGVRRFVAQSYAGWTFSRTGGRVKSEDDPLDPVPVDAMRGILEAIRHLEQ
                     AVVGAAWTEGVVLRYGGFYGSGTSLDAGGDHVEQIRKRRFPVVGDGGGVWSFVHVADA
                     ADATVAAVERGRRGVYNVVDDDPAPVAEWLPALADAVGAKAPRRVPRWVGRLVAGEAA
                     TIMMTEVRGASNAKAKRELGWVLRYPSWRLGIREGLGQSDSEPVASAAA"
     gene            2005..>2269
                     /locus_tag="VFN38_03135"
     CDS             2005..>2269
                     /locus_tag="VFN38_03135"
                     /inference="COORDINATES: protein motif:HMM:NF016430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma factor"
                     /protein_id="HET9010777.1"
                     /translation="MSESVDARVRRTRDPFYEQLRPRAFSIAYRMLGSVSEAEDVVQE
                     ALLRVHQALEGGERIASPRAFVATVTTRLAINELRSARLLREHY"
BASE COUNT          288 a          779 c          893 g          309 t
ORIGIN      
        1 taaaggtcac cgttcgcgac tcgacgcccg tgcgcgtggg ggagagggcc aggcgtgtgc
       61 gcgccgcggc gagcgcgacg gcggagctcg cgccctcggc gggcggtgcg ctcgccacgc
      121 aggcgagcgg cggcggctac agcggaccgc tcgcctaccg ccagggcaag ccgatgcgcc
      181 ccgacgtcgc gatggcgttc gaccggatgg ccgcggcggc gggcgcggcc ggcgtgcgtc
      241 tgatggtggt gagcgggttc cgctcggacg ccgagcaggc cgcgctgttc gcgcgcaacc
      301 ccaacccgcg ctgggtcgcg ccgccgggca ggtcgctcca ccggctcggc accgagctcg
      361 acctcggccc gaacgccgcg tacggctggc tcgcgcgcaa cgccgggcgg ttcggcttcg
      421 tccagcgcta ctcgtgggag gcgtggcact tcggctacac ccgcaacccg ggcacctcgt
      481 cggtcggctt cggcacgcgc ggcggcgacg gccgcgccac gcgggcggcg cagtcgttcg
      541 tgccgccgcg ctacgcgccg ctgctcgcgc gcgcagcgca gcggtggcag gtctcggcag
      601 agctgctcgc ggcgcagatc tacgcggagt cgaacttcaa cccgttcgcc cggtcgggcg
      661 ccggggcgct gggcatcgcg cagttcatgc cgggcacggc gcgcgcctac ggcgtctcca
      721 atccgttcga cgccgccgac gcgatcgacg gccaggcgca cctgatgcac gacctgctcg
      781 cgcgattcgc gtcggtcccg ctcgcgctcg ccgcctacaa cgcggggccg ggcgccgtcg
      841 cggcgtgcgg ctgcatcccg ccgtacgcgg agacgcaggc gtacgtggcg aagatcgtgg
      901 ggctgctcgg cggggccgga gtggcgggcg gcctcggcgc gatggaggtg aggctcgtgg
      961 agtgagcgcg actgtcacac ggacggcggc catctcgtcg ttaggggtgg aagcgaacga
     1021 aggagcagcc atgaaggtct ttgttgccgg agctacagga gccctcggga aacagctcgt
     1081 gccgcggctc gtcgcgggcg gccacgaggt cgtcgggatg acccgcacgc ccttgaagct
     1141 gaagctcgtt cgcgagctcg gggccaccgg cgtggtggcc gacgcgctcg accccggcgc
     1201 agtggctcgc gccgtcggcg aggccgagcc cgacgtgatc gtccaccagc tcaccgcgct
     1261 ctcgggctcc ctggacctcc gtcatttcga ccgcgacttc gcacccacca accgcctgcg
     1321 gaccgagggg acggacaacc tgctcgcggc gggccgcgcc gcgggggtgc gccggttcgt
     1381 ggcccagagc tacgcgggct ggacgttctc acgcaccggt ggccgggtga agagcgagga
     1441 cgacccgctc gaccccgttc ctgtggacgc catgcgcggg attctggaag cgatccgcca
     1501 tctcgagcag gcggtggtgg gcgcggcctg gacggagggc gtcgtcctgc gctacggcgg
     1561 cttctacggg tccgggacct cgctcgacgc cggcggcgat cacgtcgagc agatccgcaa
     1621 gcggcgattc cccgtggtgg gggacggcgg cggggtgtgg tccttcgtcc acgtcgctga
     1681 cgccgcggac gcgaccgtgg cggccgtcga acgaggacgg cgcggtgtct acaacgtcgt
     1741 cgacgacgac cccgcccctg tggcggagtg gctgcctgcc ctggccgacg cggtgggggc
     1801 gaaagcgccg cggcgcgtgc cccgctgggt cggacggctg gttgcgggcg aggccgcgac
     1861 gatcatgatg acggaggtgc gcggagcgtc gaacgccaag gcgaagcggg agctcggctg
     1921 ggtgctgcgt tacccgagct ggcgcctcgg gatccgtgag gggctcgggc agagcgacag
     1981 cgagccggtc gcgagtgcgg cggcatgagt gagtccgtcg atgcgagggt gcgccgcacg
     2041 cgcgacccgt tttatgagca gctgcgcccg agggcgttct cgatcgccta ccgaatgctt
     2101 ggcagcgtga gcgaggcgga ggacgtggtg caggaggcgc tgctgcgggt gcatcaggcg
     2161 cttgagggcg gcgagcggat cgcgtcgccg cgcgcattcg tggccacggt gacgacccgg
     2221 ctggcgatca acgagctgcg ctcggcgcgc ctccttcgcg agcactacg
//
LOCUS       DASSYW010000202         2040 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_724146, whole genome shotgun sequence.
ACCESSION   DASSYW010000202 DASSYW010000000
VERSION     DASSYW010000202.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2040)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2040)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2040
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_724146"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..681
                     /gene="rimP"
                     /locus_tag="VFN38_03140"
     CDS             <1..681
                     /gene="rimP"
                     /locus_tag="VFN38_03140"
                     /inference="COORDINATES: protein motif:HMM:NF014617.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000028 - ribosomal small subunit assembly
                     [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0042274 - ribosomal small subunit
                     biogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HET9010778.1"
                     /translation="VAVLRLTDRRVIKRLPEIALPPSKKGGPRARPFFLPRDGTGNKQ
                     NGNKKTDQTRMRKDVQDLWLLAEPYVRDAGFDLIEVQYGREPSGWVVRLFIDAPAVAG
                     AGPVSPGSVGVGLDDCERVSRDVSAALDVADSIPHTYQLEVSSPGLDRPLRRERDFAR
                     FVGQSARIRLIDGVEGRRNFLGTLQAAKDGRVEIACDGRSYEIPIDDIQKANLVPDWD
                     REFHRSAS"
     gene            678..>2040
                     /gene="nusA"
                     /locus_tag="VFN38_03145"
     CDS             678..>2040
                     /gene="nusA"
                     /locus_tag="VFN38_03145"
                     /inference="COORDINATES: protein motif:HMM:TIGR01953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor NusA"
                     /protein_id="HET9010779.1"
                     /translation="MNDGAALGLVLDQVSKDKNIDRAVLVETLEQAILTAAKRAFGMH
                     REMEAKFNEETGRVDLFQIIVIVDQVTPGKGVHQVVPIPAGPIVPASLEATGGNEVSL
                     EEAVRYNLKAEVGDELLFQIFYDEKDQAKAEEQDAKYGELLKLNRAWKGFGRIAAQTA
                     KQVILQRVREAERENVFNQYKDRKGELISGIVRRFERGNIIVDLSGAEAVLPVREQVP
                     RESYRAGDRIVAWVMEIDKAARGPQIIMSRAHKGLLEKLFEMEVPEIYEKIVRIEASA
                     REAGARSKIAVSSRDRDVDPVGACVGMKGSRVQAVVQELRGEKIDIVPFDPDPARFVC
                     NAIAPAEVARVIIDAGSHTMELIVPDEKLSLAIGKKGQNVRLASQLTGWRIDIHSESK
                     VREMEARARQSLAAIKIGGDGAGPATGVVEALFQAGWRSAAEVASAKVDELATVTGVG
                     GVDG"
BASE COUNT          363 a          626 c          736 g          315 t
ORIGIN      
        1 gtcgccgtct tgcgccttac ggatcgccgt gttataaaac gcctccctga aattgcgttg
       61 cctccttcga agaagggtgg gccgcgtgcc cgcccttttt ttttgcccag agacggaacc
      121 ggaaacaaac aaaacggaaa caagaagacc gaccaaaccc gtatgcgaaa ggacgtacaa
      181 gacctctggc tgctcgccga accctacgtt cgcgacgctg gcttcgatct gatcgaagtc
      241 cagtacggtc gtgaaccaag tgggtgggtg gtacgcctct tcatcgatgc ccccgcggtc
      301 gcgggcgcgg ggccggtgtc gccggggtct gtcggtgttg gattggatga ctgcgaacga
      361 gtgagtcggg acgtgtcggc ggccttggac gtggccgaca gcatcccgca cacgtatcag
      421 ctggaagtga gctcgcccgg gcttgatcgg cccctgcggc gagagcggga ctttgcgcgg
      481 tttgtgggtc agagcgcccg tattcggctc atcgacgggg tggaggggcg ccgcaatttc
      541 ctggggaccc tccaggcggc caaggacggc cgcgtggaga tcgcttgtga cggccggtct
      601 tatgagatcc cgatcgacga catccagaag gccaacctgg tgccggattg ggaccgcgaa
      661 ttccatcgga gcgcttcatg aacgacggtg ccgccctcgg cctggtcctc gaccaggtct
      721 ccaaggacaa gaacatcgac agagccgtgc tggtcgagac gctggaacag gcgatcctga
      781 ccgcggcgaa gcgcgccttc ggcatgcatc gcgagatgga ggccaagttc aacgaggaga
      841 cgggtcgcgt cgacctgttt cagatcatcg tcatcgtcga ccaggtgacg ccgggcaagg
      901 gcgtgcacca ggtggtgccg attcccgcgg gcccgatcgt gccggccagc ctggaggcga
      961 cgggcggcaa cgaggtctcg ctcgaggaag ccgtgcgcta caacctgaag gccgaggtcg
     1021 gcgacgagct gctgttccag atcttctacg acgagaagga ccaggcgaag gccgaggagc
     1081 aggacgccaa gtacggcgag ctgctcaagc tgaaccgcgc ctggaagggc ttcggccgca
     1141 tcgccgccca gaccgccaag caggtcatcc tgcagcgcgt gcgcgaggcc gagcgcgaga
     1201 acgtcttcaa ccagtacaag gatcgcaagg gcgagctgat ctccggcatc gtccgccggt
     1261 tcgagcgcgg caacatcatc gtcgacctga gcggcgccga ggcggtgctg ccggtgcgcg
     1321 agcaggtgcc ccgtgagtcc taccgggccg gcgaccgcat cgtggcctgg gtcatggaga
     1381 tcgacaaggc cgcgcgcggc ccgcagatca tcatgtcgcg cgcccacaag ggcctcctcg
     1441 agaagctgtt cgagatggag gtcccggaga tctacgagaa gatcgtgcgc atcgaggcgt
     1501 cggcccgcga ggcgggcgcg cgctcgaaga tcgccgtcag ctcgcgcgat cgcgacgtcg
     1561 acccggtggg cgcctgtgtc ggcatgaagg ggtcgcgcgt gcaggcggtc gtgcaggagc
     1621 tgcgcggcga gaagatcgac atcgtcccgt tcgatcccga tccggcgcgc ttcgtctgca
     1681 acgcgatcgc ccccgccgag gtggcgcggg tcatcatcga cgccggcagc cacacgatgg
     1741 agctgatcgt ccccgacgag aagctgtcgc tggcgatcgg caagaagggg cagaacgtgc
     1801 ggctcgcgtc gcagctgacc ggctggcgca tcgacatcca ctcggagtcg aaggtgcgcg
     1861 agatggaggc gcgggcgcgg cagtcgctcg cggcgatcaa aattggcggc gacggcgccg
     1921 ggccggcgac cggggtggtc gaggcgctgt tccaggccgg ctggcggtcg gcggccgagg
     1981 tcgccagcgc gaaggtggac gagctggcga cggtgaccgg cgtcggcggg gtcgatggcg
//
LOCUS       DASSYW010000203         2989 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1368953, whole genome shotgun sequence.
ACCESSION   DASSYW010000203 DASSYW010000000
VERSION     DASSYW010000203.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2989)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2989)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2989
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1368953"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1345
                     /locus_tag="VFN38_03150"
     CDS             <1..1345
                     /locus_tag="VFN38_03150"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PKD domain-containing protein"
                     /protein_id="HET9010780.1"
                     /translation="HGAPPAIAVAGGPYAGEALVEFDGSGSYDPQGGAIASYEWDFGD
                     GSTGTGVAPSHSYAADGVYTATLVVVDSKGNRSMPSRAQVTIADHAPVVNAGPALQVV
                     PVGLPTSMAVAFSDLGLEDNPWTWTIAWGDGTTDAGSTETQGESFVVNHAYPGVGSYA
                     AILSVTDKDGSTGSDTATITIAPPEEGTVILAAGDIASCGQERDESTARILDSIPGTV
                     FTLGDNVYPDAQHADYVNCFEPTWGRHKGRLFAVLGNHEYTVDPAASFDYFGDRAGPR
                     GLGYYSYNVGDWHIVVINDNLPIGTGSTQDVWLKADLAANPRACTLAMFHQPRFMSAD
                     DAYTLRDSRKTLWNRLYAAGAELVLNGHQHFYERFHPMRPDGTRDDATGIQEMIVGVG
                     GESSDAPTVNIWPTSAVRSDHFGVLKLTLLPGRWEWKFIPAKGYSFTDSGSGTCH"
     gene            1536..>2989
                     /locus_tag="VFN38_03155"
     CDS             1536..>2989
                     /locus_tag="VFN38_03155"
                     /inference="COORDINATES: protein motif:HMM:NF040138.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PKD domain-containing protein"
                     /protein_id="HET9010781.1"
                     /translation="MRPRPARVVWFAAVVALTFVSCRDLEPPTAPRAMAPPPAPPSLD
                     LVSPTAQVLVGAGNIASCSTTNDDATATLLDNIPGTVFTAGDNAYSNGTDTEFANCYG
                     PTWGRHKARTRPAVGSKDYGTTNALGYFRYFGAAAGDSAKYYYSYDLADWHVVVLNSK
                     LSTSATSAQVSWLKADLQASTKRCTVAIFNRPYYSSPSGTYANLKPVWDVLYAFGVEL
                     TLHGYNRDYERFAPQDANGNRDDAQGVREFVVGTGGAGTTSFSTIAANSEVRSTGTAG
                     VLKLTLDAGTYGWEFVPVPGKTFTDAGTGSCHDAPPPIAKPGGPYAGEGSLTFDGSAS
                     TDPQGELPLSYAWDFGDGTTGTGAKPTHTYAVDGVYTVTLVVSDAKGNPSAPATTTAT
                     IQNQPPVVNAGPSQSLMVGKAVTLNASFTDAGVDDGPWTWRIAWGDGTPDEVGSAATQ
                     PGPIVASHSYADVGSYTATVYVTDKDGGQGQDDA"
BASE COUNT          503 a         1079 c          982 g          425 t
ORIGIN      
        1 tcacggcgcg ccgccggcga tcgccgtcgc gggcggacca tacgccggtg aagcgctcgt
       61 ggagttcgac ggcagcgggt cgtacgaccc gcagggcggc gcgatcgcca gctacgaatg
      121 ggatttcggt gacgggagca ccggcaccgg cgtggccccc tcgcacagct acgcagccga
      181 cggcgtgtac accgccaccc tcgtcgtggt ggactccaag ggcaaccgca gcatgccgtc
      241 gcgcgcgcag gtgacgatcg ccgatcatgc gccggtggtg aacgcgggcc ccgcgctgca
      301 ggtggtgccc gtgggacttc cgacgtcgat ggccgtcgca ttctccgatc tcgggctgga
      361 ggacaacccc tggacctgga ccatcgcgtg gggcgacggc accaccgacg ccggaagcac
      421 cgagacgcag ggcgagtcgt tcgtggtgaa tcacgcctat cccggcgtgg gcagctatgc
      481 ggcgatcctc tcggtcaccg acaaggacgg cagcacggga agcgacacgg ccaccatcac
      541 gatcgcgccg ccggaggaag ggacggtgat cctcgccgcg ggcgacatcg cgagctgcgg
      601 ccaggagcgg gacgagtcga ccgcgcgcat cctggacagc attcccggca ccgtcttcac
      661 gctcggcgac aacgtgtatc ccgatgcaca gcacgccgac tacgtgaact gcttcgagcc
      721 gacctgggga cggcacaagg gccgcctctt cgccgtcctc ggcaatcacg agtacaccgt
      781 cgacccagcg gcgagcttcg actacttcgg cgaccgggcc ggtccgcgcg gcctcggcta
      841 ctacagctac aacgtgggtg actggcacat cgtcgtcatc aacgacaacc tgcccatcgg
      901 caccggctcc acgcaggacg tctggctcaa ggcggatctc gcggcgaatc ccagggcgtg
      961 cacgctggcg atgttccacc agccgcgctt catgtccgcc gacgacgcgt acacgctgcg
     1021 cgactcgcgg aagaccctct ggaacaggct ctacgccgcc ggggcggagc tggtgctgaa
     1081 cgggcaccag catttctacg agcgcttcca tcccatgcgt cccgacggca cgcgcgacga
     1141 cgccacggga attcaggaga tgatcgtggg cgtgggaggg gagagcagcg acgcgccgac
     1201 cgtcaacatc tggcccacga gcgccgtgcg cagcgaccat ttcggcgtgc tgaagctgac
     1261 gctcctgcct ggccgctggg agtggaagtt catccccgcc aagggctact cgttcaccga
     1321 ttccggttcc ggcacctgtc actgacacgt tgcgccactc catcgcgtgt ggggcccgtg
     1381 cgacacatct cgcgaagggc gttcgtgctc ccacggcgta accgacagcc tggctgtgag
     1441 ttacgcggcg gcaaccagcc gcacgcgctg tgcatcagtc gtcttcccat ccgacacggc
     1501 accttcgcgc ctcccttccc caggatcctt tgcccatgcg cccccggcct gcgagagtcg
     1561 tctggtttgc cgcggtcgtc gccctgacct tcgtcagctg ccgcgatctg gagcctccca
     1621 ccgcgccacg cgccatggcg ccgccgccgg ctcccccctc gctggacctg gtgtccccca
     1681 cggcgcaggt gctcgtgggg gctggcaaca tcgcctcctg ctccacgacc aacgacgacg
     1741 ccaccgcgac gctcctggac aacatcccgg gtacggtatt cacggcgggc gacaacgcgt
     1801 actcgaacgg taccgacacc gagttcgcca actgctacgg gcccacctgg ggccggcaca
     1861 aggcgcgcac ccggccggcg gtggggtcca aggactatgg cacgacgaac gcgctcggct
     1921 acttccgcta cttcggcgcc gccgcgggtg actcggccaa gtactactac agctacgacc
     1981 tggccgactg gcacgtggtc gtgctgaact ccaagctctc caccagcgcc acctcggcgc
     2041 aggtgagctg gctgaaggcg gatctgcagg cgagcaccaa gcgctgtacg gtcgcgatct
     2101 tcaatcgtcc ctactattcc tcgccctccg gcacctacgc caacctcaag ccggtgtggg
     2161 acgtgctgta cgccttcggc gtcgagctca ccctgcacgg ctacaaccgc gactacgagc
     2221 gcttcgcgcc gcaggatgcc aacggcaatc gcgacgatgc gcagggcgtg cgcgagttcg
     2281 tcgtcggcac cggcggcgcg ggcaccacct cgttctccac catcgccgcc aacagcgagg
     2341 tccggagcac cggcacggcg ggcgtgctca agctgacgct cgacgccggc acgtacggct
     2401 gggagttcgt tcccgtgccg ggcaagacct tcaccgatgc gggcaccgga agctgccacg
     2461 atgcgccgcc gccgatcgcg aagcccggcg gaccgtatgc gggcgaggga agcctgacct
     2521 tcgacggcag cgcctcgacc gacccgcagg gcgagctgcc gctctcctac gcgtgggact
     2581 tcggcgacgg caccaccggc accggcgcga agccgaccca cacctatgcc gtggacggcg
     2641 tgtacaccgt gacgctggtc gtcagcgacg ccaagggcaa cccgagcgcg ccggcgacga
     2701 cgacggcgac gatccagaac cagccgccgg tcgtcaacgc cggtccgtcc cagtcgctga
     2761 tggtggggaa ggcggtgacc ctgaacgcca gcttcacgga tgccggcgtc gatgacgggc
     2821 cgtggacctg gcggatcgcg tggggcgacg gcacgcccga cgaggtgggc agcgccgcca
     2881 cgcaaccggg gccgatcgtc gcgagccaca gctatgccga tgtcggcagc tacacggcga
     2941 cggtgtacgt caccgacaag gacggcggtc aaggacagga cgacgccat
//
LOCUS       DASSYW010000204         2703 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_441195, whole genome shotgun sequence.
ACCESSION   DASSYW010000204 DASSYW010000000
VERSION     DASSYW010000204.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2703)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2703)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2703
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_441195"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..473)
                     /locus_tag="VFN38_03160"
     CDS             complement(<1..473)
                     /locus_tag="VFN38_03160"
                     /inference="COORDINATES: protein motif:HMM:NF014586.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004066 - asparagine synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006529 - asparagine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase-related protein"
                     /protein_id="HET9010782.1"
                     /translation="MAHDSPFAEERETALTAWLVARGRVAIGFSGGVDSAYLAVVARR
                     ALGAEGVLAIIGRSASYPAAQWAAARRVADEFQVPVFELDTEELADPRYAANPSNRCY
                     FCKTELWGRLVPVARARGFDAVVDGTNADDLGDYRPGAKAAREHGVLSPLAELGFT"
     gene            complement(521..2059)
                     /locus_tag="VFN38_03165"
     CDS             complement(521..2059)
                     /locus_tag="VFN38_03165"
                     /inference="COORDINATES: protein motif:HMM:TIGR00368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
                     /protein_id="HET9010783.1"
                     /translation="MLATIRSAAVLGIEAYDVTVEVDVALGLPQWMIVGLPASAVKES
                     RERVGAALINAGFAVPPRRVTVNLAPADVKKEGTAFDLPIALGLLVGTGVLDPAALAS
                     CVAVGELGLDGTVRPVRGALSIARRVAASSGAALPTLVLPAPNVPEAALVHGLPLSAP
                     LTLAELVDWLRSGVLPPAPARRVEVPVDEPLDLHDVAGQESAKRALAIAAAGSHGLLL
                     VGPPGAGKTMLARRLPTILPSLTNGEALEVTAVHSVAGMLDATAGVVARRPFRAPHHS
                     ISTAGLVGGGSPPRPGEVSLAHHGVLFLDELLEFPRSVLEALRQPLEDGSVTIARAHA
                     SLRFPARFALAAAMNPCPCGHAGDPSHPCVCPAADVLRYRSRLSGPLADRIDLHVTVP
                     AVPLAELAARGGESSAAVRRRVEAARALQRARYGSAGCNARAPGRWLEVHGAVEPTAR
                     QLLATAGERLHLSARAFHRVLRVARTIADVEGARTVTVAHMAEALAYRPRVPDASRAS
                     PTTV"
     gene            2377..>2703
                     /locus_tag="VFN38_03170"
     CDS             2377..>2703
                     /locus_tag="VFN38_03170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HET9010784.1"
                     /translation="MRHTRKGFTLIELLIVVVIIGILAAIAIPKFANTKSKAYIAAMK
                     SDLRNLVTAEESFFADSTKYVTYDTTKLKFKPSTGVSMPNIATFSGAWLATNTHSQLA
                     NFSCGIG"
BASE COUNT          419 a          992 c          929 g          363 t
ORIGIN      
        1 gtgaagccga gctcggcgag cgggctcagg acgccgtgct ctcgcgccgc cttcgcgccg
       61 gggcggtagt ccccaaggtc gtcggcgttg gtgccgtcca ccaccgcgtc gaacccccgc
      121 gcccgtgcga ccgggacgag cctgccccac agctccgtct tgcagaagta gcagcggttg
      181 gacgggttgg ccgcgtagcg cggatcggcc agctcttcgg tgtccagctc gaataccggc
      241 acctggaact cgtcggcgac gcgccgcgcc gccgcccact gggccgccgg atacgacgcg
      301 ctgcgcccga tgatggcgag cactccctcg gcgccgagcg cacgccgcgc gaccacggcg
      361 agataggccg agtcgacccc cccactgaag ccgatcgcca cacggccgcg cgccacgagc
      421 caggccgtga gcgcggtctc cctttcctcg gcgaacggtg agtcgtgggc catgtcgtga
      481 agctatccgc ctcaccgccg tcagggcagt cacccggagc tcacacggtc gtgggcgacg
      541 cccgcgacgc atcgggcacg cgcggccgat aggcgagcgc ctccgccatg tgggccacgg
      601 tgaccgtgcg tgcaccctcc acgtcggcga tcgtgcgcgc gacgcggagc acgcggtgaa
      661 aggcgcgcgc cgagaggtgc agccgctccc ccgcggtggc gagcagctgc cgcgccgtcg
      721 gttccaccgc cccgtgcacc tcgagccagc gaccgggtgc gcgcgcgttg cacccggcac
      781 tcccatagcg cgcccgctgc agcgcgcgcg ccgcttccac gcgccttcgc acggcagcgg
      841 agctttcgcc cccacgcgcg gccagctcgg cgagcggcac ggcgggcact gtgacgtgga
      901 gatcgatccg gtcagccagc ggtccggaga ggcgggagcg atagcgcagc acgtcggccg
      961 ccggacagac gcacggatgc gacggatcac cggcgtggcc gcagggacag ggattcatcg
     1021 ccgcggccag cgcgaaccgc gccggaaagc gcagcgacgc gtgggcgcgc gcgatcgtga
     1081 cgctcccgtc ctccagcggc tgacgcagcg cctcgagcac cgagcgcggg aactcgagca
     1141 gctcgtcgag gaacaggacc ccatggtgcg cgaggctcac ctcgcccggg cgcggcggcg
     1201 agccgccgcc gacgagtccc gcggtggaaa tggagtgatg cggtgcgcgg aagggacgcc
     1261 gcgcgacgac gccggccgtg gcgtcgagca tgccggcgac cgaatgcacc gccgtgacct
     1321 cgagcgcctc gccgttcgtc agcgacggaa ggatcgtggg caggcgacgc gcgagcatcg
     1381 tcttgccggc gcccggcggt ccgacgagca ggagtccgtg tgacccggcg gccgcgatcg
     1441 cgagcgcgcg cttggcgctc tcctgccccg cgacgtcgtg caggtcgagc ggctcatcga
     1501 ccggcacctc gacccgccgc gccggcgccg gcggcaacac gcctgagcga agccagtcca
     1561 cgagctcggc gagcgtgagc ggtgcggaca gcgggagccc atgcaccagc gccgcctcgg
     1621 gcacgttggg tgccggcagc acgagcgtgg gcagcgcagc gccggacgag gcggcgacgc
     1681 gccgggcgat ggacaacgcg ccgcgcacgg ggcggacggt gccgtcgagc ccgagctcac
     1741 cgacggcgac gcacgacgcg agcgccgcgg gatcgagcac gccggtgccg acgagcagcc
     1801 cgagcgcgat cggcaggtcg aaggcggtgc cctccttctt cacgtccgcc ggcgcgaggt
     1861 tcaccgtgac acgtctgggc ggcacggcga agccggcatt gatcagcgcc gcgccgacgc
     1921 gttcgcgact ctccttgacc gcgctcgccg gcagcccgac gatcatccat tgcggcaggc
     1981 ccagggcgac gtccacctcc acggtgacgt cgtatgcctc gatacccagg acggcggcgg
     2041 agcggatggt ggcgagcacg cgccatcatg tgctcgacgg gcgacgaatc gcgtgccgct
     2101 cccttgcgcc ggcgcgcatt ccattgccaa ttgccgcgcg ttgctctggc gtttttccgt
     2161 gccatcgtgc aggacgcggt gcctccctgg gaaccgcccg tattcgtcca catgacaacc
     2221 atcgcctaac tggatatgcc acaactactt acgcgatcgg cacacccgga cgttctcgtg
     2281 gcatcggcac tgctttacaa gggtcggcaa acctcgccac ttcgtcgcga cctcctgcct
     2341 gcgcgcgaag ccactccttc tgaccggatc ctttccatgc gccacacccg gaagggtttc
     2401 accctgatcg agcttctcat cgtggtcgtg atcatcggca tccttgccgc gatcgcgatc
     2461 ccgaagttcg ccaacaccaa gtcgaaggcg tacatcgccg cgatgaagtc ggatctccgc
     2521 aacctggtca cggccgaaga gtcgttcttc gcggattcga ccaagtacgt gacgtacgac
     2581 accacgaagc tcaagttcaa gccgtcgacg ggcgtctcga tgccgaatat cgccaccttc
     2641 tcgggtgcct ggctcgcgac gaacacgcac agccagctgg cgaacttctc ctgcggtatc
     2701 ggc
//
LOCUS       DASSYW010000205         2631 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1523915, whole genome shotgun sequence.
ACCESSION   DASSYW010000205 DASSYW010000000
VERSION     DASSYW010000205.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2631)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2631)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2631
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1523915"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..746)
                     /locus_tag="VFN38_03175"
     CDS             complement(<1..746)
                     /locus_tag="VFN38_03175"
                     /inference="COORDINATES: protein motif:HMM:NF012803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HET9010785.1"
                     /translation="MRRLSKMIVFFVACSAALVFTVTRHDDGIRVGADNQLRAATRPL
                     VGKYDLGQLPIFSKTLFYVRENYFDKNRLDPKRMLVGALDFVQRDVPEILIDRWPEHD
                     PKQVTVKVNGQQRSFSIERVDAPWSLRTKLQEIFQFVQPNLQPVPDKEESRRLVEIEM
                     AATNGMLYTLDPHSVLLDVETYKDMRTQTQGKFGGLGIVIEMDKKNRITVKRPMPDTP
                     AIRVGIKAKDHIVRINNESTMNMTLNEAVER"
     gene            898..1917
                     /locus_tag="VFN38_03180"
     CDS             898..1917
                     /locus_tag="VFN38_03180"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: protein motif:HMM:NF005143.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase factor sigma-32"
                     /protein_id="HET9010786.1"
                     /translation="MTGRRRALPTQQDPGAARPDRTAALEELPTGKAIVDLIDGENRA
                     PKISKSEVSSLAVYLRSLRAHPVLSREEEHELAVSYVQTHELAPARKLITANLRLVVK
                     IAQEYRRAHRNLLDLIQEGNVGLIQAVQRYDPFRGVKLSTYAAWWIRAYILKFILANW
                     RIVRIGTTQAQRRLFFNLRRERERMERMGVDTDSKRLADALDVSETDVVEMERRLAAS
                     ETSLDAPVRSESLPGRTHGDMVPASPSSRPDLQVENGEFQELLRAKLDAFGANLRDRE
                     LQIFRRRLLADQPTTLEQLGADHGVSRERARQIEERLKKKLRLFLETELGDSLGDVPA
                     PDRPK"
     gene            1914..>2631
                     /gene="rsmI"
                     /locus_tag="VFN38_03185"
     CDS             1914..>2631
                     /gene="rsmI"
                     /locus_tag="VFN38_03185"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: protein motif:HMM:NF012799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0000451 - rRNA 2'-O-methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HET9010787.1"
                     /translation="MKTAHAPGTLAVVATPLGNPADLSARATAVLREADVIVAEDTRS
                     ARQLLAGIGGNPAARILSCFDANEAARAAEIGALLAGGARVALISEAGTPLVSDPGYR
                     VVAAAIAAGARVVPIPGPSALLAALVAAGLPTDKFLFLGFPPRKSGPRRRLFESVRAL
                     GFTLVMYESPLRVGATLADLAETLGGGRRACVARELTKPHEELVRDGLGALAALVAAG
                     LPTDKFLFLGFPPRKSGPRRR"
BASE COUNT          400 a          890 c          917 g          424 t
ORIGIN      
        1 cgctcgaccg cctcgttcag cgtcatgttc atcgtcgatt cgttattgat gcggacgatg
       61 tgatccttgg ccttgattcc gacccggatg gcgggcgtgt cgggcatcgg gcgcttgacc
      121 gtgatgcggt tcttcttgtc catctcgatc acgatgccga gcccgccgaa cttcccctgg
      181 gtctgcgtcc gcatgtcctt gtaggtctcg acgtcgagca ggaccgagtg cggatcgagc
      241 gtgtagagca tgccgttcgt cgcggccatc tcgatctcga cgaggcggcg cgactcttcc
      301 ttgtcgggga cgggctgcaa attgggctgc acgaactgga agatctcctg cagcttggtg
      361 cggaggctcc agggcgcgtc cacgcgctcg atggagaagc tgcgctgctg gccgttgacc
      421 ttcacggtca cctgcttcgg atcgtgctcg ggccaccgat cgatcaggat ctccggcacg
      481 tcgcgctgca cgaagtccag cgccccgacc agcatccgct tcggatcgag ccggttcttg
      541 tcgaagtagt tctcgcgtac gtagaacagc gtcttcgaga agatcgggag ctgtcccagg
      601 tcgtatttgc ccaccagcgg gcgcgtcgcg gcgcgcagct ggttgtcagc cccgacgcga
      661 atgccgtcgt cgtgacgcgt aaccgtgaat acgagcgccg cactgcacgc gacgaagaaa
      721 acgatcatct tgctcagccg ccgcatgcgg gactccgagg gtgggaggga gggggaggag
      781 gtggacgaag gcgaatcgga ggatggacca tcgatgagat ccatggattg gacaatgata
      841 ccgagttctc gtcgtgccgc acgaacagtc ttatactggc ccctcgtcat gaccgggatg
      901 accgggagac ggcgcgcgct cccgacccag caggatccgg gggcggcccg accagatcgc
      961 accgcggcgc tcgaggagct gccgacgggg aaagccattg tcgatctcat cgacggcgaa
     1021 aaccgcgcgc ccaagatctc caagagcgag gtctccagcc tcgccgtcta cctccgctcg
     1081 ctgcgcgcgc accccgtgct gtcgcgcgaa gaggagcatg agctcgcggt gtcgtacgtg
     1141 cagacgcacg agctcgcgcc ggcgcgcaag ctcatcaccg cgaacctgcg gctggtcgtg
     1201 aagatcgctc aggagtatcg gcgcgcgcac cggaacctgc tcgacctcat ccaggaaggc
     1261 aacgttggcc tcatccaggc tgttcaacgt tacgacccgt ttcgcggcgt caagttgtcg
     1321 acctacgccg cctggtggat tcgcgcgtac atcctgaagt tcatcctcgc gaactggagg
     1381 atcgtccgga tcgggaccac ccaggcgcag cggcggctgt tcttcaacct gaggcgcgag
     1441 cgcgaacgga tggagcggat gggcgtggac acggacagca agcgcctggc ggacgcgctc
     1501 gacgtcagcg agacggacgt ggtcgagatg gagcggcgcc tcgccgcatc ggagacgtcg
     1561 ctcgacgccc cggtgcgcag tgagagcctc cccgggcgca cccacggcga catggtcccg
     1621 gcctcgccct cctcgcgtcc cgacctgcag gtcgagaacg gcgagtttca ggaactactc
     1681 cgggcgaagc tcgacgcgtt cggcgccaac ctgcgcgatc gcgagctgca gatcttccgc
     1741 cggcgcctgc tcgccgacca gccgacgacg ctggagcagc tgggcgccga ccacggcgtc
     1801 agccgcgagc gcgcccgtca gatcgaagag cggctgaaga agaagctgcg cctgttcctg
     1861 gagaccgagc tcggtgattc gctcggcgac gttccggctc cggacagacc gaagtgaaga
     1921 cggcccacgc cccgggcacg ctcgcggtcg tcgcgacccc gctgggcaac cccgccgatc
     1981 tgtcggcgcg cgcgaccgcg gtgctgcgcg aggcggacgt catcgtcgcc gaggacacgc
     2041 gcagcgcgcg ccagctgctc gcggggatcg gcggcaatcc ggcggcgcgg atcctgtctt
     2101 gcttcgacgc caacgaggcg gcgcgcgcgg cggagatcgg cgcgctcctc gcgggcggcg
     2161 cgcgcgtcgc gctgatctcc gaggcgggga cgccgctcgt ctccgacccc ggttaccggg
     2221 tcgtcgcggc ggcgatcgcc gcgggggccc gcgtcgtccc gatcccgggg ccgtcggcgc
     2281 tgctcgccgc gctggtcgcg gccgggctgc ccacggacaa gttcctgttc ctcggcttcc
     2341 cgccgcgcaa gtcgggtccg cgacgccggc tgttcgagag cgtgcgtgcg ctcggcttca
     2401 cgctggtgat gtacgaatcg ccgctgcggg tcggggcgac gctggccgat ctggcggaga
     2461 cgctgggcgg cgggcggcgg gcctgcgtcg cgcgcgagct gaccaagccg cacgaggagc
     2521 tcgtccgcga cggcctgggc gcgctcgccg cgctggtcgc ggccgggctg cccacggaca
     2581 agttcctgtt cctcggcttc ccgccgcgca agtcgggtcc gcgacgccgg c
//
LOCUS       DASSYW010000206         2054 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_966439, whole genome shotgun sequence.
ACCESSION   DASSYW010000206 DASSYW010000000
VERSION     DASSYW010000206.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2054
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_966439"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1819)
                     /locus_tag="VFN38_03190"
     CDS             complement(<1..1819)
                     /locus_tag="VFN38_03190"
                     /inference="COORDINATES: protein motif:HMM:NF012698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HET9010788.1"
                     /translation="MTGSQLFVFGDFTLDPRQRLLQRGTEVIGLEPKVFDTLVALVES
                     AGQALTKDELLARVWPDAFVEEGSLTRNISTLRKVLASDDNPQGYIETLSKRGYRFQP
                     VVRAVPAAAPAAPDLPAPPVAVEPPAPTPNRRPLLIGVAAAMALLAVAAAGLWWRGGE
                     ARGPIASIAVLPLQNLSGDAGQEFFSDGMTEALISKLAQITDVRVTSRTSVMRFKGTS
                     QPVPAIGRQLGVDAVVEGSVQRAGDRVRVNVQLIHAATDSHVWAKEFDGTTADLLDLQ
                     RRIAVAIAGDISSQITPARLTEDTDRPVAAAAYDAYLLGRYLSFKTDLESRRRAVAEF
                     RKAVTLEPTFAEAQAGLAMALLPLGGLAGEARQAAQAAVRLDDNLAEAHAAMAAVSFD
                     AWDWEGTQREFERALGLYPDSEDACANFGLALSAFGRHDEAVHWSGRFASKNPVSAQL
                     HLNYAIVLMNARRYAEAERHLKLTIELEPQGFSAPILLAQVYHFTGRTEEGLALMATP
                     PFKETSIRAYFFAAAGRRSEALAIVERFQKNPAPADLLSLGVTHLLLGNDERGFDFLE
                     QAVAKRLGYMRWLNVHPLYDAWRSDPRFAALVKQLRLPAA"
BASE COUNT          325 a          730 c          684 g          315 t
ORIGIN      
        1 cggccgcagg caggcggagc tgcttgacca gggcggcgaa tcgagggtcg ctccgccacg
       61 cgtcgtacaa cgggtgcacg ttcagccatc gcatgtagcc cagccgcttc gcgacggcct
      121 gctcgagaaa atcgaagccg cgctcgtcgt tgccgagcag caaatgcgtg acgccgagcg
      181 agagcagatc ggcgggtgcc gggttcttct gaaaccgttc gacgatcgcc agggcctcgg
      241 agcggcggcc ggccgcggca aagaagtacg cccggatgct cgtctccttg aacgggggcg
      301 tcgccatgag cgcgagcccc tcttcggtcc ggccggtgaa gtggtacacc tgcgcgagca
      361 ggatcggcgc tgagaacccc tgtggctcga gctcgatggt cagcttgagg tgccgctcgg
      421 cttccgcata gcgccgcgcg ttcatgagca cgatcgcgta attcaggtgc agctgggccg
      481 agacgggatt cttcgacgcg aaccgcccag accagtgcac cgcctcgtcg tgccggccga
      541 acgcagacaa cgccagcccg aaattcgcgc acgcgtcctc gctgtctgga tagagcccga
      601 gcgcgcgctc gaattcccgc tgcgtgcctt cccagtccca cgcgtcgaac gacaccgcgg
      661 ccatcgccgc gtgcgcttcg gccagattgt catcgagcct caccgccgct tgcgccgctt
      721 gccgcgcctc gccggcgagc ccgccgagcg gcagcagcgc catcgcgaga cccgcctgcg
      781 cttctgcgaa cgtcggctcc agtgtcacgg ccttgcggaa ctccgcgacg gcgcgccgcc
      841 gggattcgag gtcggtcttg aacgacagat agcggccgag cagatacgcg tcgtaggccg
      901 cggccgccac cggacgatcg gtgtcctccg tcaggcgcgc cggcgtgatc tgcgaggaga
      961 tgtcgccggc gatggccacc gcgatccgcc gctggagatc gagcaggtcc gccgtcgtgc
     1021 cgtcgaactc cttcgcccac acgtggctgt cggtggccgc gtgaatgagc tgcacgttca
     1081 cacgcacgcg gtcgccggcg cgctgcaccg acccctcgac cacggcatcc acgccgagct
     1141 gccgcccgat cgccggcacc ggctgtgacg tgcccttgaa ccgcatcacc gacgtccgcg
     1201 aggtcacgcg aacatccgtg atctgcgcga gcttcgagat gagcgcctcg gtcatgccgt
     1261 cggagaagaa ctcctgtccg gcatcgccgg agaggttctg cagcggcagc acggcaatcg
     1321 acgcgatcgg cccgcgcgcc tcgccgccgc gccaccagag cccggccgcc gcgaccgcga
     1381 gcagcgccat cgccgcggcc acgccgatga gcaaagggcg ccggtttggt gtgggcgcag
     1441 gcggttcgac ggccacgggt ggagcgggga ggtcaggcgc ggccggcgcg gccgcgggca
     1501 cggcgcgcac caccggctgg aagcgatagc cgcgcttcga cagcgtttcg atgtacccct
     1561 gcgggttgtc gtcgctcgcc agaaccttgc gcaacgtcga gatgttgcgc gtcaggcttc
     1621 cttcctcgac gaacgcgtcg ggccacacgc gggccagcag ttcgtccttg gtcagcgcct
     1681 ggccggcgga ctccacgagc gccaccagcg tgtcgaagac cttcggttcg agcccgatca
     1741 cctcggtgcc gcgctgcagc agccgctgcc gcgggtcgag cgtgaaatcg ccgaagacga
     1801 acaactgact ccccgtcatc gagttatccg tcctcagaaa tccttcagaa aaccttcacg
     1861 gcgtccgaag gactcggccg gaccgggcgt ctattgtatc ggccaccgtg gcccagtggc
     1921 ttcacagcta tatgaccgat caccgcatct actgcgggtt tcccggccgc gccggcctgc
     1981 cagccaggcc ggccaaccgg gtagttgcgg tgcgccggct actcgtggtc cgcgctcacg
     2041 tagcggaaga tttt
//
LOCUS       DASSYW010000207         5005 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_539722, whole genome shotgun sequence.
ACCESSION   DASSYW010000207 DASSYW010000000
VERSION     DASSYW010000207.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 5005)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5005)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5005
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_539722"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..338
                     /locus_tag="VFN38_03195"
     CDS             <1..338
                     /locus_tag="VFN38_03195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010789.1"
                     /translation="HIRYVPGAGDTASAPDGMVFLPAPESFVLEGPELRVELRGVPVF
                     VDTRPATFRRTSVVIFLPDSVLSRLRVQNGWDSNRATRTIGVPPPGSPGQRLRGPGYD
                     LRFGPTLSI"
     gene            complement(370..1197)
                     /locus_tag="VFN38_03200"
     CDS             complement(370..1197)
                     /locus_tag="VFN38_03200"
                     /inference="COORDINATES: protein motif:HMM:NF015921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010790.1"
                     /translation="MRPNDSDTAATPANALSKVPAVTLAFWIVKIFATTVGETGGDAL
                     SMTLQLGYVVSSAIFLAFFAVMLAAQLRTRHYHPAIYWLVVVATTTVGTTTSDMFDRT
                     LGLGYVKSSAIELGLVIAVLVAWHLSTGQIGVDRITTRKNEIFYWLTILVSNTLGTAL
                     GDFAADDAGLGFQKGALVFAGLILVVAALHRFTRVPKSILFWAAYVLTRPLGATLGDT
                     LTKPVADGGLNFGRFTSSLVIGAGMVILIATTSLRRRATVNGDDSLARLSGDAASVP"
     gene            1293..2066
                     /locus_tag="VFN38_03205"
     CDS             1293..2066
                     /locus_tag="VFN38_03205"
                     /inference="COORDINATES: protein motif:HMM:NF013718.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HET9010791.1"
                     /translation="MTTSPTHDPLRRPWRSRFAHRHPRAYLAAHVAGGTLAVVVLTWI
                     FLFIADEIPEPSALVGVDRFVSAWMESHGTEPGERILHAVSYLGAPGLFAIVVVVVAW
                     LSWRRDWLAASALVATTASGMFLDSVLKFVFHRGRPETAIEFIRRASWSFPSGHAMNS
                     MIGYGFLTVLLLEHVRDARRRAAIVIAAALLIGVIGFSRLYLGVHYLSDVTGGWLAGG
                     AWLIVCASGYRFARARLTLQGFSGVARTESHTASAGLGR"
     gene            complement(2003..2968)
                     /locus_tag="VFN38_03210"
     CDS             complement(2003..2968)
                     /locus_tag="VFN38_03210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010792.1"
                     /translation="MGASPLPPRLTTPEVLRTIDSVSRHSDGALMSVDIPWAALLADS
                     SAALLVRRDQLAVSQLFAQHGLPVTVTLDVTNGLNRAAESDVLVKLGRSITDPAVQRV
                     YREYATAFDSIVHPRYLALAMETNLIRAAAPAPVYAAVVAMTNAAASQMRAAGSTTQL
                     MVSVQVETAWGRFGGGSYVGVQQDRTDFPFVQAFGLSSYPYLGGFATPEEIPLDYYAR
                     LVAGAPLPMLVVEGGWTSGAVGTVTSSPALQTRYIRRQAQLADTARLLGIYQITFTDI
                     DLTSFPVPPGSILPLFAQLGLLDVDYRPKPALAVWDSVRATPLKP"
     gene            complement(3150..4409)
                     /locus_tag="VFN38_03215"
     CDS             complement(3150..4409)
                     /locus_tag="VFN38_03215"
                     /inference="COORDINATES: protein motif:HMM:NF013715.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Nramp family divalent metal transporter"
                     /protein_id="HET9010793.1"
                     /translation="MTPHPTGVRGFWKSLGPGIISGAADDDPSGIATYSIAGAQYGTS
                     LLWTALFTWPMMMAVQSMCARIGMVTGRGLAGALRHKLPRTTLFVAAVVLFVANTINV
                     GADLSGMADAAELLTGVNSHIWVIVLGVGINVATIHFRYVVLERVLKWLALALVAYVI
                     AALYVGPDWSVVARDTFIPSLPRRAGAWATLVAILGTTISPYLFFWQASQEVEEEKAL
                     GRRRVVDRLGADRREIATRDIDIGIGTFFSNAAMFFIILATALTLHRAGMTSLTTSRD
                     VAEALTPLAGRFASLLYTVGLLGTGALAIPTLAGPGAYAFAEIFHWRQGMDEPYRKAH
                     GFYATFICSVAIGGALDFAGVNPVSALYWSAVINGVLAPFLLVGILIAASDRTLMQGQ
                     PSSRIGRLAVGITAVVMFAAAIGMFVL"
     gene            4540..>5005
                     /locus_tag="VFN38_03220"
     CDS             4540..>5005
                     /locus_tag="VFN38_03220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010794.1"
                     /translation="MRLRPMLALLLLAGLPFRAMSQTAAEAEVSAVVARLFGGMRTAD
                     SAVVRSTFAPGARFARVDSRQSPAVIAYDTPDGWLAGVANSAKRWDERVYDVQVKVDA
                     EMAQVWAPYTFYLDGKVRHCGVDTMELLRDASGWKITHLSDTQRREGCREVPP"
BASE COUNT          811 a         1641 c         1788 g          765 t
ORIGIN      
        1 atcacatccg ctacgtgccg ggtgccggcg acacggcgtc ggcgcccgat ggcatggtct
       61 tccttcccgc gccggaatcg ttcgtgctcg aggggccgga gcttcgcgtc gagctgcgcg
      121 gcgtgccagt cttcgtggac acgaggccgg cgaccttccg gcgcacgagc gtggtgatct
      181 tccttccgga cagcgtattg agtcggctgc gggtgcagaa cggctgggac tcgaatcgcg
      241 ccacgcgaac gatcggcgtg cccccgccgg gaagtccggg ccagcggctc aggggcccgg
      301 gctacgacct gcgcttcggg ccgaccctga gcatctagcg tccgaccatg atgccgccca
      361 gcatcgtcgt catggaacag acgccgcgtc gccgctgaga cgagcgagcg agtcgtcgcc
      421 attcaccgtc gcccgcctgc gcagcgaggt cgtggcgatg aggatcacca tgccggcgcc
      481 gatgacgagc gacgaggtga accgcccgaa gttcagccct ccgtcggcga cgggtttggt
      541 gagcgtgtcg cctagcgtgg cgccgagcgg ccgggtgagc acgtaggccg cccagaagag
      601 gatgctcttc gggacgcgcg tgaagcggtg cagcgcggcc accacgagga tcagtcccgc
      661 gaacaccagc gcgcccttct ggaatcccag cccggcatcg tccgccgcga agtcgccgag
      721 cgcggtcccg agggtgttcg agacgaggat ggtgagccag tagaagatct cgttctttcg
      781 cgtcgtgatc cggtcgacac cgatctggcc ggtggagaga tgccaggcga cgaggacggc
      841 gatcaccagg ccgagctcga tcgccgagga tttcacgtag ccgagtccga gcgtgcggtc
      901 gaacatgtcc gacgtcgtcg tgccgaccgt cgtcgtcgcc accacgacga gccagtagat
      961 ggccggatgg tagtgccggg tcctgagctg cgcggcgagc atgacggcga agaaggcgag
     1021 gaagatcgcg gagctgacga cgtagcccag ctgcagcgtc atcgagagcg catcgcctcc
     1081 cgtctcgccg acggtggtgg cgaagatctt cacgatccag aaggccagcg tgaccgccgg
     1141 gaccttgctg agtgcgttcg ccggtgtggc agcggtgtcg gagtcgttgg gtcgcatgcg
     1201 tgccacgcag gcacgacgca ggccatgcgg gccgatcacg gcgccattcc tgctaaacgg
     1261 tgagcgccgc actccatcga cctgtcacca gcatgacaac gagtccaacg cacgacccac
     1321 tccgtcgacc atggcgatca cggttcgcgc atcggcatcc gcgcgcctac ctcgccgcgc
     1381 acgtcgctgg agggacgctg gcggtggtcg tgctcacctg gatcttcctc ttcatcgccg
     1441 acgagattcc cgagccgagt gccctcgtcg gcgtcgatcg attcgtctcg gcgtggatgg
     1501 agtcgcacgg cacggagccg ggcgagcgca tcctgcacgc ggtcagctat ctcggcgccc
     1561 ccgggctgtt cgcgatcgtc gtcgtggtgg tggcgtggct ctcatggcga cgcgactggc
     1621 tagcggcgag cgcgctcgtc gcgacgaccg ccagcggcat gttcctcgac agcgtgctga
     1681 agttcgtctt tcaccgcggg cggccggaga cggcgatcga gttcatccgg cgcgcgtcgt
     1741 ggagctttcc cagcggccac gcgatgaact cgatgatcgg ctacggcttc ctcaccgtgc
     1801 tcctgctcga gcacgtccgc gatgcccggc gacgcgcggc gatcgtgatc gcggccgcgc
     1861 tgctcatcgg cgtcatcgga ttcagccggc tctacctcgg cgtgcactac ctgagcgacg
     1921 tgacgggcgg ctggctggcc ggcggcgcgt ggctgatcgt ctgcgcgagc ggctatcgat
     1981 tcgcgcgcgc gcgtctcacg cttcagggct tcagcggtgt cgcgcgtacc gaatcccaca
     2041 cggcgagcgc gggcttgggt cgatagtcga cgtccagcag gccgagctgc gcgaagaggg
     2101 gaaggatcga gcccggtggg acgggaaacg acgtgaggtc gatgtcggtg aacgtgatct
     2161 ggtagatgcc gagcagccgt gcggtgtcgg cgagctgcgc ctgacgcctg atgtagcgcg
     2221 tctgcagcgc aggcgacgac gtcacggtgc cgaccgcgcc cgacgtccac ccgccttcca
     2281 ccaccagcat cggcagcggc gcgcccgcga cgagtcgcgc gtagtagtcc aacgggatct
     2341 cctctggcgt ggcgaatccg ccgaggtatg gatacgagga aagtccaaac gcctggacga
     2401 aggggaagtc cgtccgatcc tgctggaccc cgacgtagct cccgcccccg aagcggcccc
     2461 acgcggtctc cacctgtacg ctcaccatga gctgcgtcgt ggagccggcg gcgcgcatct
     2521 gcgaagcggc ggcgttcgtc atggcgacga ccgccgcgta caccggcgcg ggtgccgcag
     2581 cgcggatgag gttcgtctcc atcgccagcg cgagataccg cgggtgcacg atgctgtcga
     2641 aggccgtcgc gtactcacgg tagacgcgct gcacggcggg atcggtgatc gagcggccga
     2701 gcttcaccag cacgtccgat tcggcggcgc ggttcaatcc gttcgtcacg tcgagcgtga
     2761 cggtcacggg taatccgtgc tgcgcgaaga gctgcgacac ggcaagctgg tcgcgccgaa
     2821 cgaggagcgc ggcgctcgaa tccgcgagga gggcggccca cgggatgtcc accgacatca
     2881 gggcgccgtc gctgtgccgg ctcaccgaat cgatcgttcg cagcacctcg ggggtggtga
     2941 gccgcggcgg caggggggac gctcccatgc gatacgtccg gagcgccgga gcactcggtt
     3001 ccgtgccggc ggttgcgcag ccgagcaggg cgcacgcggt gacgagcaga gtcgcacgat
     3061 gagcacgacg ggtggtcatc ttctggttcc tggtagtgtt cgagccgtcg cgagctcgac
     3121 ggcgatggtg ctgttcagcg acggtgtgct cacaggacga acatgccgat cgcggcggcg
     3181 aacatgacga cggccgtgat gccgacggcc aggcgaccga tccgcgagct gggctgcccc
     3241 tgcatgagcg tgcgatccga cgcggcaatg aggatgccga cgagcaggaa gggcgccagc
     3301 actccgttga tcaccgccga ccagtagagc gccgacacgg gattcacccc ggcgaaatcg
     3361 agagccccgc caatcgctac cgagcagatg aacgtcgcgt agaacccgtg cgccttgcga
     3421 tatggctcgt ccatcccctg ccgccagtgg aagatctcgg cgaaggcata cgcgcccggt
     3481 ccggcgaggg tcgggatcgc gagcgctccc gtgccgagga gcccgaccgt gtacaacagc
     3541 gaggcgaagc ggccggcgag cggcgtgagc gcttcggcga cgtcgcgcga ggtcgtgagg
     3601 ctcgtcatgc ccgcgcgatg cagcgtgagc gccgtggcga ggatgatgaa gaacatcgcc
     3661 gcgttggaga agaaggtgcc gatgccgatg tcgatgtcgc gggtggcgat ctcgcgtcgg
     3721 tcggcgccga gccggtcgac gacgcggcgt cgtccgagcg ccttctcctc ctcgacctcc
     3781 tgcgacgcct gccagaagaa gagatagggc gaaatggtgg tgccgaggat ggcgacgagg
     3841 gtggcccacg cgcctgcgcg gcgaggcagg gagggaatga acgtgtcgcg cgcgacgacc
     3901 gaccagtcgg gcccgacgta cagcgcggcg atcacgtacg ccacgagcgc cagcgcgagc
     3961 cacttgagca cccgttcgag cacgacgtag cggaaatgga tcgtcgcgac gttgatgccc
     4021 acgccgagca cgatgaccca gatgtgggag ttcacgccgg tcaggagctc ggcggcgtcg
     4081 gccatcccgg acaggtcggc gccgacgttg atcgtgttgg cgacgaagag cacgacggcg
     4141 gcgacgaaca gggtggtgcg agggagcttg tggcggagcg cgccggcgag cccgcgtccg
     4201 gtgaccatgc cgatgcgggc gcacatcgac tgcaccgcca tcatcatcgg ccaggtgaac
     4261 agtgccgtcc acaggagcga cgtcccgtac tgcgccccgg cgatggaata ggtggcgatg
     4321 ccggagggat catcgtcggc cgcgcccgag atgatgcccg ggccgaggct cttccagaag
     4381 ccgcgcacgc cggtcggatg gggcgtcacc cgcggctcgt gccgtcgctc gccgctgcgc
     4441 gcgtcgatcc tgcccggttt cgtcattgca ggttgcggtg atcgttggca ctatcaggcg
     4501 accaaccttt catccggacc tcgccaccac accatgataa tgcgtctccg acccatgctg
     4561 gcgcttctcc tgctcgccgg tctgccgttc cgcgccatgt cacagaccgc ggcggaggcg
     4621 gaagtgagcg ccgtcgtcgc ccgcctgttc ggcggcatgc gaacggccga cagcgccgtg
     4681 gtccgttcga ccttcgcgcc gggcgcacga ttcgcgaggg tcgacagccg ccagtcgcca
     4741 gccgtcatcg cgtacgacac gccggacggc tggctcgccg gcgtggccaa ctccgcgaag
     4801 cgctgggacg agcgcgtgta cgacgtgcag gtgaaggtgg acgccgagat ggcgcaggtc
     4861 tgggcgccgt acaccttcta tctcgacggg aaggtccgcc actgcggcgt ggacacgatg
     4921 gagctgctgc gcgacgcgtc ggggtggaag atcacccatc tgtccgatac ccagcgccgc
     4981 gagggatgcc gcgaggtacc tccgg
//
LOCUS       DASSYW010000208         2318 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_578209, whole genome shotgun sequence.
ACCESSION   DASSYW010000208 DASSYW010000000
VERSION     DASSYW010000208.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2318)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2318)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2318
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_578209"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(264..1433)
                     /locus_tag="VFN38_03225"
     CDS             complement(264..1433)
                     /locus_tag="VFN38_03225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016846 - carbon-sulfur lyase activity
                     [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019343 - cysteine biosynthetic process via
                     cystathionine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aspartate aminotransferase family
                     protein"
                     /protein_id="HET9010795.1"
                     /translation="MTRVYDDDLDTAFATRAIHAGQRPEPLAGAIMTPVYLTSTYVQD
                     ALGENKGYEYARGKNPTREALERNVASLEGGRHGFAFASGMGCVDSIMKLFKSGDHII
                     CGENVYGGTFRLFDRILQHMGLSFSYVDTRDPQRIADAVTPRTVALLVETPTNPLMRL
                     TDLAAASEMARRAGALLIVDNTFATPFFQRPFEYGADIVWHSTTKYLNGHSDMIGGIA
                     VVRDDDLATRLQFIHNAAGAVQGPFDSWLALRGTKTLHLRMPRHDSNGRRLAAWLAER
                     MGHERVIYPGLPSHPQHDLAARQMTGFGGMISVELGTKERAATVLGRVRIFSLAESLG
                     GVESLISHPASMTHASVPVERRAQLGITEGLIRLSCGVEDENDLLCDVERAFAGM"
     gene            1594..>2318
                     /locus_tag="VFN38_03230"
     CDS             1594..>2318
                     /locus_tag="VFN38_03230"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HET9010796.1"
                     /translation="MNEVEATPMAADGGAMRCLVVDDEPRLRQVLVRLMEGDGFTCME
                     AANGVDALEQLRRAPVTLVLTDLRMPQMGGVELLRQVRARYPDTGVVLITAVAEVDVA
                     VSCLAIGAMDYLTKPFHLDEVRARVTQALEKRRLILENREHQAMLEQRVAAQAQRLER
                     MFLASIQSLADALEVKDRYTRGHSVRVSRYAAAIATRLGLPAADVRQIELGGHVHDIG
                     KIGVRETVLNKPGALTEEEYEHI"
BASE COUNT          346 a          739 c          886 g          347 t
ORIGIN      
        1 atcggccgga tgctcccacg caatcgaggc gatctgggtc agcggtttac ggtcgggcat
       61 gggaggagtt ggggagtagg gagtggggag tggggaatcg ggagtgaggc gcggggcgcg
      121 gggtgtgggg tgtgggtgag ccggtcatgg agtgggctcg agcaggcgca cgacatgtcc
      181 cgaggccctt cacgcgcccc gcgccccgcg tcccgcgtcc ccgcatttcc actccccact
      241 ccccactccc gattcccggc accttacatt cctgcgaacg cgcgctccac gtcgcagagg
      301 aggtcgttct cgtcctcgac gccgcaggag aggcgaatga gtccttccgt gatgccgagc
      361 tgggcccgcc gctcgacggg caccgaggcg tgggtcatcg acgccgggtg gctgatcagg
      421 ctctcgacgc cgcccagtga ctcggcgagg gagaagatgc gaacccggcc gagcacggtg
      481 gcggcgcgct ccttcgtccc gagctcgacc gagatcatac cgccgaaacc cgtcatctgg
      541 cgagccgcga ggtcgtgctg cgggtgcgag ggaagccccg gatagatgac gcgctcgtgc
      601 cccatccgct cggcgagcca ggcggcgagg cggcggccgt tgctgtcgtg ccgcggcatg
      661 cgcaggtgga gcgtcttcgt gccgcggagg gcgagccagg agtcgaaggg gccctggacg
      721 gcgccggccg cgttgtggat gaactgcagc ctggtcgcca ggtcgtcgtc gcgcaccacg
      781 gcgatgccgc cgatcatgtc gctgtgtccg ttcagatact tcgtcgtgga gtgccagacg
      841 atgtccgcgc catactcgaa ggggcgctgg aagaacgggg tcgcgaaggt gttgtccacg
      901 atcaggagcg cgcccgcccg tctggccatc tcgctggccg ccgcgaggtc ggtgaggcgc
      961 atcagtggat tggtcggcgt ctcgacgagc agggccaccg tgcgcggggt gacggcgtcg
     1021 gcgatgcgct gcggatcgcg cgtgtccacg tagctgaagg acagccccat gtgctgcagg
     1081 atgcggtcga acaggcggaa ggtgccgccg tagacgttct caccgcagat gatgtggtcc
     1141 cccgatttga agagcttcat gatcgagtcc acgcagccca tgccgctcgc gaaggcgaag
     1201 ccatggcgcc cgccctcgag cgaggccaca tttcgctcca gcgcttcgcg cgtcgggttc
     1261 tttccgcgcg cgtactcgta gcccttgttc tcgccgagcg cgtcctgcac gtaggtcgaa
     1321 gtgaggtaga ccggcgtcat gatcgccccg gcgaggggct ccggccgctg cccggcgtgg
     1381 atcgcccgcg tggcgaacgc cgtgtcgaga tcgtcgtcgt agacccgcgt catgcgtgct
     1441 ctcggaagtg tggggaaggg cggcgcgcgg tccgcggcgg agcgcccggt ggctggaagc
     1501 taaccgcggc ggatcgggcg ggggaggcga gaggggggcg gccacgcggc ggcccgccag
     1561 gactcaggtg aaggccggga caggatggag acgttgaacg aggttgaagc gacgccgatg
     1621 gcggcggacg ggggcgcgat gcgctgcctg gtcgtggacg acgagccgcg gctgcggcag
     1681 gtgctcgtcc gcctgatgga gggggacggc ttcacctgca tggaggcggc gaacggcgtc
     1741 gacgcgctgg agcagttgcg gcgggcgccc gtcacgctgg tcctcaccga cctgcggatg
     1801 ccgcagatgg ggggcgtcga gctcctgcgc caggtccgcg cgcgctaccc cgacacgggc
     1861 gtcgtgctga tcaccgcggt cgccgaggtg gacgtggcgg tgagctgcct ggcgatcggg
     1921 gcgatggact acctgacgaa gccctttcac ctcgatgagg tgcgggcccg ggtgacccag
     1981 gcgctcgaga agcgccggtt gatcctcgag aaccgcgagc accaggcgat gctcgagcag
     2041 cgcgtggccg cgcaggcgca gcggctcgag cggatgttcc tcgccagcat ccagtcgctg
     2101 gccgacgccc tggaggtcaa ggaccgctac acgcgcggac actccgtgcg cgtcagccgc
     2161 tatgcggcgg cgatcgccac ccggctcggc cttcccgccg ccgacgtccg gcagatcgag
     2221 ctgggcgggc acgtgcacga catcggcaag atcggcgtgc gcgagacggt gctgaacaag
     2281 ccgggcgcgc tcacggaaga ggagtacgag cacatcat
//
LOCUS       DASSYW010000209         3178 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_685129, whole genome shotgun sequence.
ACCESSION   DASSYW010000209 DASSYW010000000
VERSION     DASSYW010000209.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3178)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3178)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3178
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_685129"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..483)
                     /locus_tag="VFN38_03235"
     CDS             complement(<1..483)
                     /locus_tag="VFN38_03235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010797.1"
                     /translation="MSRFTHSVRCTIASLSALALGACADTQPTAPTLTPTDASLSQSP
                     ELNSRHVFHVKDFYAASNRARPSRTGISYHGGTVIAGPAVTKVVAIYWSTGTIYAGPS
                     TGTGRGASDPTLIGSFLRGLGGSPYFNINTTYYNASNSHVLNQVGYTSFWSTGSDCAG
                     P"
     gene            complement(760..>3178)
                     /locus_tag="VFN38_03240"
     CDS             complement(760..>3178)
                     /locus_tag="VFN38_03240"
                     /inference="COORDINATES: protein motif:HMM:NF012926.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycoside hydrolase family 15 protein"
                     /protein_id="HET9010798.1"
                     /translation="YYPRIDQANTRDFGLLVTGPDGFFSEEKRDTHSTLHLLDVGVPG
                     YRLVNRCTQDRYEIEKTIITDPERAVLLQRVRFRALVGVPTDYRVFALIAPHIGNQGY
                     GNDGWVDSYKGIPMLFARRADVSLAVMCNVGWRAASAGYVGVNDGWRQVKTTGSLTEL
                     FTEARDGNIALSAEVALGAKHRHGDDPAVAEFVVALAFGGGPAEAAQRARMTLASQFD
                     RVQASYVRNWSRFHEHTHGPAMSETATNPEESRRRAKSDLAAHAHDSTKAHEAKPKRR
                     ERRKRTPVELPESVVDLYRMSAAVLAIHEDKSASGAMIASLSIPWGHSKGDHELGGYH
                     LVWPRDLVNSAGALIALGHNVMARRTLRYLLSTQEADGRWAQNLWLDGTPYWNAVQMD
                     EIAFPIFFAELLRREGQLEDLDPWPMIRGAAGFLVRNGPVTGQDRWEENAGYSPFSLA
                     VQISALLVAADFAERAEESALAELLRTTADAWNASIERWTYVTNTRLATECGVEGYYV
                     RIAPADVGDAAPASGGRIPIKNRPIGEHEAPYEDIVSVDALALVRFGLRDPRDPRIVN
                     TVKVIDAKLRVRTETGPAWYRYNMDGYGEKADGSPFDVVGVGRPWPLLAGERAHYELA
                     AGHPEVALQLLGVMRAQASDGGMLPEQVWDDHDIPKLELFNGRATGGAMPLVWAHAEY
                     AKLVRSLHDGRVFDMPQQPYERYVRSKGESPVTLWAPHNRCSSLIEGSTLRLHLSEPA
                     TVSLSVNGTASSRDVTATDTTLPGVFVADLDTAGLQPGTALRFAVRGADGRASGDHAL
                     VVVKRPD"
BASE COUNT          457 a         1127 c         1081 g          513 t
ORIGIN      
        1 cgggccggcg caatcagagc cggtggacca gaagctcgtg tagccgacct ggttcagcac
       61 gtgcgagttc gacgcgttgt agtacgtcgt gttgatgttg aagtagggcg aaccgcccag
      121 gccgcgcagg aaggagccga tgagcgtcgg atccgacgcg ccgcgccctg tgccggtcga
      181 cggcccggcg tagatggtgc ccgtgctcca gtagatcgcc accaccttcg tgaccgccgg
      241 accggcgatc accgtgccgc catggtacga gatccccgtg cggctcggac gtgcgcggtt
      301 cgatgcggcg tagaagtcct tcacatgaaa cacgtgccgg ctgttgagct ccggcgactg
      361 cgacagcgac gcgtcggtcg gcgtgagcgt cggcgcggtc ggctgggtat ccgcgcaggc
      421 gccgagggcg agtgcggaca gcgaggcgat ggtgcaacga acggagtggg tgaaacgcga
      481 catgaagatc gggtctccga ctggggtcct gacgcgcgcc ggccgactgg ctcggacgca
      541 aacaagcacg ccacgtcgtc gcggcggtcg tgcacggagc tgatgcacgg accatgaatg
      601 catcgcgccg ccgcatctct cgatgcgcgt cgcgggcgga gacggtagcg ccgttctgcg
      661 gattgcgcca gacgatttgt ttcggagtga tcgagcacga cggatgacgc gtgaagctgt
      721 cagcttcgtg acagctttct gcgcgacatc gaggccgcgc tagtcgggcc gcttcaccac
      781 cacgagtgcg tgatctccac tcgcgcggcc gtccgcgccg cgcaccgcga agcgcagcgc
      841 ggtgcccggc tgcagtcccg ccgtgtcgag atccgcgacg aagacgccgg gcagcgtcgt
      901 atccgtcgcc gtgacgtcgc gcgacgaagc cgtgccgttc accgacaggc tcaccgtcgc
      961 gggctccgac agatggaggc ggagcgtgga accttcgatc aggctgctgc accgattgtg
     1021 cggcgcccac agcgtcaccg gcgactcgcc cttgctgcgc acgtagcgct cgtacggctg
     1081 ctgcggcatg tcgaacacgc gcccgtcgtg cagcgagcgc accaacttgg cgtactcggc
     1141 gtgcgcccat accagcggca tcgcgccccc cgtcgcgcgg ccgttgaaca gctccagctt
     1201 cggaatgtcg tggtcgtccc acacctgctc ggggagcatg ccgccgtcgc tcgcctgggc
     1261 gcgcatcacc cccagcagct gcagtgcgac ctcgggatgt cccgccgcca gctcgtagtg
     1321 cgcgcgctcg cccgccagca gcggccatgg gcgcccgacc ccgacgacgt cgaacggtga
     1381 tccgtccgcc ttctcgccat agccgtccat gttgtagcga taccaggccg gcccggtctc
     1441 ggtccggacg cgcagcttgg cgtcgatcac cttcacggtg ttgacgatcc gcggatcgcg
     1501 cgggtcgcgc agcccgaagc gcaccagcgc gagcgcatcg acgctcacga tgtcctcgta
     1561 cggcgcttcg tgctcgccga tcggccgatt cttgatcggg atgcgcccgc cgctcgccgg
     1621 cgcggcgtcg cccacgtccg ccggcgcgat gcgcacgtag tagccctcca cgccgcactc
     1681 cgtcgcgagg cgtgtgttcg tcacgtacgt ccaccgctcg atcgacgcgt tccatgcgtc
     1741 cgccgtggtg cgcagcagct ccgccagcgc ggactcctcc gcgcgctcgg cgaaatccgc
     1801 cgccaccagc agcgccgaga tctgcacggc gaggctgaac ggcgagtagc cggcgttctc
     1861 ctcccagcga tcctgccccg tgaccggccc attgcgcacg aggaatcccg ccgcgccgcg
     1921 gatcatcggc cacggatcca ggtcttccag ttgcccctcg cggcgcagca gctcggcgaa
     1981 gaagatcggg aacgcgatct cgtccatctg cacggcgttc cagtagggcg ttccgtcgag
     2041 ccagagattc tgtgcccagc ggccgtcggc ctcctgggtg ctgaggagat agcgcagcgt
     2101 ccggcgtgcc atcacgttgt ggccgagcgc gatgagcgcg cccgcgctgt tcacgaggtc
     2161 gcgcggccac acgaggtggt agccccccag ctcgtgatcc cccttgctgt gcccccacgg
     2221 gatggagagg ctggcgatca tcgcgccgct ggcactcttg tcctcatgga tcgccagcac
     2281 ggccgcgctc atccgataga ggtcgaccac gctctccggc agctccaccg gcgtgcgctt
     2341 ccggcgctcc cgacgcttcg gcttcgcttc gtgcgccttc gtgctgtcgt gcgcgtgtgc
     2401 ggcgaggtcg ctcttcgcgc gacggcgcga ctcctcgggg ttcgtcgccg tctccgacat
     2461 cgccggtccg tgcgtatgct cgtgaaagcg cgaccagttg cgcacgtacg acgcctgcac
     2521 ccggtcgaac tgcgacgcga gcgtcatccg tgcccgctgg gccgcctcgg ccggcccgcc
     2581 cccgaaggcg agcgcgacga cgaactccgc gaccgcgggg tcgtcgccat gtcgatgctt
     2641 cgccccgagc gcgacttccg cgctgagcgc gatgttgccg tcgcgcgcct cggtgaacag
     2701 ctcggtcagc gacccggtcg tcttcacctg gcgccagccg tcgttcaccc cgacgtagcc
     2761 cgcgctcgcc gcgcgccagc cgacgttgca catcacggcg agcgacacgt ccgcgcgccg
     2821 ggcgaagagc atcgggatgc ccttgtagct gtccacccag ccgtcgttgc cgtaaccctg
     2881 gttgccgatg tgcggcgcga tgagggcgaa gacgcgatag tcggtcggca cgccgacgag
     2941 ggcgcgaaag cgcacgcgct gcaggagcac ggcgcgctcg ggatcggtga tgatcgtctt
     3001 ctcgatctcg taccggtcct gcgtgcagcg gttcaccagc cggtagccgg gcacgcccac
     3061 gtcgagcagg tggagggtgc tgtgcgtgtc ccgcttctcc tccgagaaga agccgtccgg
     3121 tcccgtgacg aggaggccga agtcgcgggt gttcgcctgg tcgatgcgcg ggtagtac
//
LOCUS       DASSYW010000210         3594 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_657965, whole genome shotgun sequence.
ACCESSION   DASSYW010000210 DASSYW010000000
VERSION     DASSYW010000210.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3594)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3594)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3594
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_657965"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1777
                     /locus_tag="VFN38_03245"
     CDS             <1..1777
                     /locus_tag="VFN38_03245"
                     /inference="COORDINATES: protein motif:HMM:TIGR03710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase subunit alpha"
                     /protein_id="HET9010799.1"
                     /translation="AVSAKMGNGVWTVEIIPAEIQPPPRILEGASGYRIRIGSGPVTN
                     WGDETQLVLAFNEQVLLSRHRLGALAPDAIILIEDLWASHPDEDVRAAWRAALAELGT
                     RQYRIIPVPMDEQCRTIVDNPRKGKNMFALGMLCCIYGRDLERVREQIAHAFRKKSEA
                     VYESNVALLELGYRWAEEQLDVRVEVPATPAETPMVVMNGNEAIGMGAVAAGFELCAM
                     YPITPATSASHYLGEVFDRFGGLLHQAEDEIAAAGVAIGASYAGKVALTITSGPGLAL
                     KTEFIGLAVMTEVPLVVVDVQRGGPSTGLPTKVEQSDLLASLYGQPGDAPKVVLAPAT
                     IEECFHVMITARRIAEAFRCVVFVLSDANLATGVQPFPRPAIEERWMRAALDLDELPP
                     GAKPYDWNPETGLSRRIVPGQANGMYTLTGLEHDSRSKVAYSGDIHQHGSTMRSRKIA
                     VLQSMLLPPVVHGDADGDLLVVGWGSTKGAIEEAVDRARAAGLRVSSVALTFLSPLQP
                     GLRELFARFRKVCTVEINYSDEPGAPYITAESRRYGQLAWLLRAHTLVDVDCWTRVPG
                     EPLRPGAILEAIQAKLPDATTRGTA"
     gene            1774..2739
                     /locus_tag="VFN38_03250"
     CDS             1774..2739
                     /locus_tag="VFN38_03250"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HET9010800.1"
                     /translation="MTATSLPICQLIGAAAADDDRSWEMSDYEGATARWCPGCGDHSA
                     LTAVEKLLVSEQLRPEQTVFVSGIGCSSRFPHYLKTYGFHGIHGRALPVATGIKLHRP
                     DLTVFVVMGDGDCTSIGAGHWMHALRYNVKMVAMVLDNSIYGLTKNQTSPTTPQGHPS
                     NTQPRGSYLPPLDPIELALGITNASFVAQTAEWVPAHLLATLRAAYHHDGFAFVRVLQ
                     RCPVYMPGLYQQAVQKPDLMELLVHDDGVTVPELERTYRNRLAHDPRDLARARELATP
                     GDRIRLGVFFKDASRARYDLIRRVPAHSPAERGILLNAELDKYAV"
     gene            2729..>3594
                     /locus_tag="VFN38_03255"
     CDS             2729..>3594
                     /locus_tag="VFN38_03255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010801.1"
                     /translation="MPSDEQVRRALDALADRARMYQAALAAAHDEIHEYFIAHRARER
                     GRSEVAARTLGHFADGRIDVERFSAVLADTRMLAPKGAAILTQCTAVLAELMARGDAV
                     LLHAVPPGGDVRQVVDRALADAGRAFGAAHVFRAVKAGTYRTEEHGPLLRAFPFARWS
                     RAERDLAPPLVVEVEGADLRAESVAEYLDGGARIVFLVRGAASPAPLVRLLSPGTLVI
                     QGSDAAALERLAGFSGPAVVGLLPPQSAQFVHDPRGGPRLDERLSITHLPDVPRRGLG
                     WRSARQCAEELA"
BASE COUNT          510 a         1243 c         1347 g          494 t
ORIGIN      
        1 cgcggtctcg gcgaagatgg ggaacggcgt ctggacggtg gagatcatcc cggccgagat
       61 ccagccgccg ccgcgcattc tggagggcgc gagcggctac cgcatccgta tcggcagcgg
      121 ccccgtgacc aactgggggg acgagacgca gctcgtcctt gccttcaacg agcaggtgct
      181 gctctcgcgg caccggctgg gcgcgctggc gccggacgcc atcatcctga tcgaggacct
      241 ctgggcctcg catcccgacg aggacgtgcg ggcggcctgg cgtgccgcgc tcgccgagct
      301 cgggacgcgg cagtatcgca tcatcccggt cccgatggac gagcagtgcc gcacgatcgt
      361 ggacaatccg cgcaagggca agaacatgtt cgcgctcggg atgctctgct gcatctacgg
      421 gcgcgatctc gagcgcgtcc gcgagcagat cgcccacgcc ttccggaaga agtcggaggc
      481 ggtgtacgag agcaacgtgg cgctgctcga gctggggtac cgctgggcgg aggagcagct
      541 ggacgtgcgc gtcgaggtgc cggcgacgcc ggccgagacg ccgatggtcg tgatgaacgg
      601 gaacgaggcg atcggcatgg gggcggtggc ggccggcttc gagctgtgcg cgatgtatcc
      661 catcacgccg gcgacgtcgg cgtcgcacta tctcggggag gtgttcgacc gcttcggcgg
      721 gctcctgcat caggcggagg acgagatcgc ggcggccggc gtggccatcg gcgcgtcgta
      781 cgccggcaag gtggcgctga cgatcacgag cgggccgggg ctggcactca agacggagtt
      841 catcgggctg gcggtgatga cggaggtccc cctcgtcgtc gtggacgtgc agcgcggcgg
      901 accgagcacc gggctcccca cgaaggtgga gcagtcggac ctgctggcgt cgctgtacgg
      961 acagccgggc gacgcgccca aggtggtgct ggcgccggcg acgatcgagg agtgcttcca
     1021 cgtgatgatc acggcgcggc ggatcgccga ggcgtttcgc tgcgtggtgt tcgtgctgtc
     1081 cgacgcgaac cttgccaccg gcgtccagcc gttcccgcgg ccggcgatcg aggagcgctg
     1141 gatgcgcgcc gccctcgacc tggacgagct gccgccggga gcgaagccgt acgactggaa
     1201 ccccgagacg gggctgtcgc gccggatcgt gccgggacag gcgaacggca tgtacaccct
     1261 cacgggcctc gagcacgaca gccgcagcaa ggtggcgtac agcggtgaca tccatcagca
     1321 cggctcgacg atgcggagca ggaagatcgc ggtgctccag tcgatgctgc tgccgccggt
     1381 ggtgcacggc gacgccgacg gcgacctgct cgtcgtgggg tgggggagca cgaagggcgc
     1441 gatcgaggag gcggtggacc gcgcgcgcgc cgcggggctc cgggtgtcgt cggtggccct
     1501 caccttcctc tcgccgctgc agccggggct gcgcgagctc ttcgcgcggt tccggaaggt
     1561 gtgcacggtg gagatcaact acagcgacga gcccggcgca ccgtacatca cggcggagtc
     1621 gcgccgctac gggcagctcg cctggctgct gcgcgcccac acgctggtgg acgtggactg
     1681 ctggacgcgc gtccccggcg agccgctgcg gcccggcgcc atcctcgagg ccattcaggc
     1741 caagctgccg gacgccacga cgcgaggtac cgcatgaccg ccacgagcct gccgatctgc
     1801 cagctcatcg gcgccgccgc cgccgacgac gaccgcagct gggagatgtc cgactacgaa
     1861 ggggcgacgg cacggtggtg cccggggtgc ggcgaccact ccgcgctcac ggcggtggag
     1921 aagctgctcg tctccgagca gctgcggccg gagcagacgg tcttcgtctc gggcatcggc
     1981 tgctcgagcc gctttccgca ctacctgaag acctacggat tccacgggat ccacggtcgc
     2041 gccctgccgg tggccacggg gatcaagctg catcgccccg acctcaccgt gttcgtcgtg
     2101 atgggcgacg gcgactgcac gtcgatcggc gcgggccact ggatgcacgc gctgcgctac
     2161 aacgtgaaga tggtggcgat ggtgctggac aactccatct acggcctcac caagaaccag
     2221 acgtcgccga ccacgccgca gggacatccg agcaacaccc agccccgggg cagctacctg
     2281 cccccgctcg acccgatcga gctggcgctc ggcatcacca acgcgtcgtt cgtcgcccag
     2341 acggcggagt gggtgccggc gcacctcctc gccaccctgc gcgccgccta ccaccacgac
     2401 ggcttcgcct tcgtgcgggt gctgcagcgc tgcccggtct acatgccggg gctgtaccag
     2461 caggcggtcc agaagccgga cctcatggag ctcctggtgc acgacgacgg cgtgacggtg
     2521 ccggagctgg agcgcaccta ccgcaaccgc ctcgcgcacg acccgcgtga cctcgcccgc
     2581 gcgcgcgagc tcgcgacgcc gggcgaccgc atccggctcg gcgtcttctt caaggacgcg
     2641 tcccgggcgc gctacgacct cattcgccgg gtgccggcgc acagccctgc cgagcgcggc
     2701 atcctgctca acgcggagct cgacaaatat gccgtctgac gaacaggtgc ggcgcgcgct
     2761 cgacgcgctc gccgaccggg cgaggatgta ccaggcggcg ctcgccgcgg cgcacgacga
     2821 gattcacgag tacttcatcg cgcatcgcgc gcgggagcgc gggcggtccg aggtggcggc
     2881 gcggacgctc gggcacttcg ccgacgggcg gatcgacgtg gagcggttca gcgccgtgct
     2941 ggccgacacc cggatgctgg ccccgaaggg cgcggccatc ctcacgcagt gcacggcggt
     3001 gctcgccgag ctgatggcgc gcggcgacgc ggtgctgctg cacgccgtgc cgccgggcgg
     3061 cgacgtgcgg caggtcgtgg accgggcgct ggcggacgcg gggcgggcct tcggcgccgc
     3121 gcacgtgttc cgcgcggtca aggcgggaac gtatcgcacg gaggagcacg gtcccctgct
     3181 gcgggcgttc cccttcgcgc gctggagccg cgccgagcgg gacctcgccc cgccgctggt
     3241 ggtggaggtg gagggcgccg acctgcgggc cgagagcgtg gcggaatacc tcgacggtgg
     3301 cgcgcggatc gtcttcctcg tccggggcgc cgcatcgccc gcaccgctgg tgcggctgct
     3361 gtcgccgggc acgctcgtga tccaggggag cgacgcggcg gcgctggagc gactggcggg
     3421 attctccggc cccgcggtgg tgggcctgct gcccccgcag agcgcgcagt tcgtgcacga
     3481 tccccgtggc ggtccgcggc tcgacgagag gctgtccatc acccatctgc ccgacgtgcc
     3541 gcgccgaggc ctcgggtggc ggtcggcccg gcagtgcgcc gaggagctgg cgca
//
LOCUS       DASSYW010000211         2187 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_451665, whole genome shotgun sequence.
ACCESSION   DASSYW010000211 DASSYW010000000
VERSION     DASSYW010000211.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2187)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2187)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2187
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_451665"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            161..1366
                     /gene="manD"
                     /locus_tag="VFN38_03260"
     CDS             161..1366
                     /gene="manD"
                     /locus_tag="VFN38_03260"
                     /EC_number="4.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF011654.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008927 - mannonate dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0016052 - carbohydrate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-mannonate dehydratase ManD"
                     /protein_id="HET9010802.1"
                     /translation="MKIIGGTVSVCSPGRNFVTLKLETEDGVYGLGDATLNGRELAVA
                     SYLRDHVLPLLEGRDARRIEDIWQFLYKGAYWRRGPVTMSAIAAVDTALWDIKGKTLG
                     APVYQLLGGASRDAVMVYGHASGATIEAAVAAAGGFIAQGYKAVRAQCAVPGLEREYG
                     VAAGRAYEPAERGPLPETVWSSERYLETVAPLFERLRRELGSEPHLLHDVHHRLRPIE
                     AARLGRALEPYRLFWLEDPTPAENQESFRLIRQHTTTPLAVGEVFNTIHDCRQLIEEQ
                     LIDYIRTTVVHAGGISHLRRIASLAELYQVRTGSHGATDLSPVCMAAALHFDLSVHNF
                     GIQEYMPHTPDTDRVFPHAYTFANGVMHPGDAPGLGVDLDETLAATFPYQPAYLPIAR
                     LADGTMHDW"
     gene            1371..>2187
                     /locus_tag="VFN38_03265"
     CDS             1371..>2187
                     /locus_tag="VFN38_03265"
                     /inference="COORDINATES: protein motif:HMM:NF012863.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDSL-type esterase/lipase family protein"
                     /protein_id="HET9010803.1"
                     /translation="MRAIAIAVLAATTAVHAGQAPAPADRPLPRTDANSAAAHAQLLE
                     KARRGRIDLYFAGDSITRRWGATDYPEFLADWTRRFFGWNAANFGWGGDTTQNILWRL
                     ENGELDGVHPKVIVLLAGTNNVGSAPSAVPVAERAEDVSRGIKAILEVMRSKAPEATI
                     VLTAVFPRNDSMAAMPVIDEINRRIARFADGRSIRWLNVNDTLASANGTLVDGMMGDG
                     LHPTLTGYQVWADGLEPIRLELLGPRAAADRAPPPTGDPSKAATTIRSEAALAR"
BASE COUNT          349 a          786 c          756 g          296 t
ORIGIN      
        1 ggcgggaaga gcccggaggc ggccctgcgg ttcgccgtcg ccgcgagcgc cctgaaacag
       61 accatccccg gcgacttcaa tcgggtgagc gtcgccgaag tcgagcgcct cgcggccgga
      121 gacgcctcgg gccgcgtgca acggtaggag cggattcgac gtgaaaatca tcggcggcac
      181 ggtcagcgtc tgcagccctg ggcggaactt cgtcacgctc aagctcgaga ccgaggacgg
      241 cgtttacgga ctgggcgacg cgacgctcaa cgggcgcgag ctcgccgtcg cttcgtattt
      301 gcgcgaccac gtcctgccgc tgctcgaggg gcgcgacgcg cggcgcatcg aagacatctg
      361 gcagtttctc tacaagggcg cctactggcg ccgcgggccg gtgaccatgt cggccatcgc
      421 cgccgtcgac accgcgctgt gggacatcaa ggggaagacg ctcggagccc ccgtgtacca
      481 gctgctcggc ggcgcctcgc gcgacgcggt gatggtctac gggcacgcca gcggcgccac
      541 catcgaggcc gcggtcgccg cggccggcgg gttcatcgcg caggggtaca aagcggtgcg
      601 cgcccagtgt gccgtgccgg ggctcgagcg cgagtacggt gtggcggccg gccgcgccta
      661 cgaacccgcc gagcgcggcc cgctgccgga gacggtctgg agcagcgagc gctacctgga
      721 gacggtggcg ccgctcttcg agcgcctccg gcgtgagctc ggctccgagc cgcatctgct
      781 ccacgacgtg catcaccggc tgcggccgat tgaagccgcg cgcctcggac gcgcgctcga
      841 gccgtaccgg ctgttctggc tggaggaccc caccccggcg gagaaccagg agagcttccg
      901 gctcatacgc cagcacacga ccacgccgct ggccgtgggc gaagtgttca acacgattca
      961 cgactgccgg cagctgattg aggagcagct gatcgactac atccggacca ccgtcgtcca
     1021 cgccggcggc atcagccacc tgcggcggat cgccagcctc gccgagctct atcaggtgcg
     1081 gaccgggtcg cacggcgcca ccgatctgag cccggtctgc atggccgcgg cgctccactt
     1141 cgatctgagc gtgcacaact tcggcatcca ggagtacatg ccgcacacgc ccgacaccga
     1201 ccgcgtattc ccccatgcct acacgttcgc caacggcgtg atgcatccgg gcgacgcgcc
     1261 ggggctcggc gtcgatctcg acgagacgct ggccgcgacc ttcccgtatc aaccggcgta
     1321 tctgccgatc gcgcggctcg ccgacggcac catgcacgac tggtagacac atgcgcgcga
     1381 ttgcgatcgc cgtcctcgcc gccacgacgg ccgtgcacgc cgggcaggct cccgcgccgg
     1441 ctgatcgtcc cctgccgcgc accgacgcga actccgccgc cgcgcacgcg cagctgctcg
     1501 aaaaggcgcg gcgcggccgc atcgacctgt atttcgccgg cgactcgatc acgcggcgct
     1561 ggggcgccac cgactacccg gagttcctgg ccgactggac gcggcgcttc ttcggctgga
     1621 acgccgccaa cttcggctgg ggcggcgata ccacccagaa catcctctgg cggctcgaga
     1681 acggcgaact ggacggcgtg cacccgaagg tgatcgtgct gctcgccggc acgaacaatg
     1741 tcggcagcgc accgagcgcg gtgccggtcg ccgagcgggc cgaggacgtc agccgcggga
     1801 tcaaggcgat cctcgaggtg atgcggagca aggcgcccga ggcgacgatc gtcctcaccg
     1861 cggtcttccc ccgcaacgac agcatggcgg ccatgccggt catcgacgag atcaaccggc
     1921 ggatcgccag gtttgccgat gggcgctcga tccggtggct gaacgtcaac gacacacttg
     1981 ccagcgcaaa cggaacgctc gtcgacggga tgatgggtga cggactgcac ccgactctca
     2041 cgggttacca ggtgtgggcc gacggactgg agccgatccg gctcgagctg ctcgggccgc
     2101 gcgcggccgc ggaccgcgcg ccgccgccga cgggcgatcc gtccaaggcg gccacgacga
     2161 tcaggtccga ggcagcgctc gcacggc
//
LOCUS       DASSYW010000212         2396 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1435995, whole genome shotgun sequence.
ACCESSION   DASSYW010000212 DASSYW010000000
VERSION     DASSYW010000212.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2396)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2396)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2396
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1435995"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..509
                     /locus_tag="VFN38_03270"
     CDS             <1..509
                     /locus_tag="VFN38_03270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HET9010804.1"
                     /translation="TEGTSGSAVTALMEGTRPVLVEVQALAAPSGYGTPQRVATGYDG
                     RRLALLLAVLDKRAGLSFGQLDVFLNVVGGVRLQEPAGDLAVAAALASSVYDRALPHE
                     AVFVGEVGLGGEIRPVSQADRRLAEAANMGMTTAYLAERAVPRRVPKGLTAVGVRTIS
                     DLFERVFQ"
     gene            506..1249
                     /gene="ispD"
                     /locus_tag="VFN38_03275"
     CDS             506..1249
                     /gene="ispD"
                     /locus_tag="VFN38_03275"
                     /EC_number="2.7.7.60"
                     /inference="COORDINATES: protein motif:HMM:NF013308.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050518 - 2-C-methyl-D-erythritol
                     4-phosphate cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HET9010805.1"
                     /translation="MSAPGPGDAARDGAALIAPHRDVGVVIVAGGGGTRAGGDELKQF
                     RWVAGKPMLLHSVQTFMARPDVGMVVVVLPQRYAGDPPPWLFQCDVDRLLVSLGGRTR
                     SESVANGLDDLPDEAQIVLVHDAARPLVGAATIDRVVAAVREGKSVVAALPVVDTLKE
                     VDDEGRIVRTVPRERLWRAQTPQGFPRRVIVDAHRRAKADRVDATDDAALLERLGVPV
                     HVVRGSERALKVTEPDDFARIDALFASAE"
     gene            1246..1920
                     /locus_tag="VFN38_03280"
     CDS             1246..1920
                     /locus_tag="VFN38_03280"
                     /EC_number="2.7.7.87"
                     /inference="COORDINATES: protein motif:HMM:NF013468.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0061710 - L-threonylcarbamoyladenylate
                     synthase [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase"
                     /protein_id="HET9010806.1"
                     /translation="MTADRSLGIPFWSPEEVAAAIRHALEQMELRRVLAYPTETVYGF
                     GGAIDRDSVNALIRLKGRPKGKPFLLLIAGSDMLGKLDLQLPSFATNLAARFWPGPLT
                     LVLPGGEKRVPEPLRGPEGGIAVRWTSHASLQRLIRAHGDAITSTSANRPGVPPATSA
                     GEIREQWGDALARGELRLLDGGTLRPSPPSTVVDCTGRAPRVIRPGAIAAARLREIAP
                     RLIGDA"
     gene            1926..2396
                     /locus_tag="VFN38_03285"
     CDS             1926..2396
                     /locus_tag="VFN38_03285"
                     /inference="COORDINATES: protein motif:HMM:NF013607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight protein arginine
                     phosphatase"
                     /protein_id="HET9010807.1"
                     /translation="MKLLFVCTGNTCRSALAEAIARKVAIERGLPEIEVASAGTSAWD
                     GAAASDGAMLVGLERRLDLGSHRSQQLTRALVESSDLIFTMGPHHLERVEALGAGDKA
                     YLLTAYPTRGATGRAISDPMGAELDVYRATADELESEIRRVFDRLAAGRTPDAQ"
BASE COUNT          307 a          846 c          926 g          317 t
ORIGIN      
        1 gtaccgaggg gaccagcggc agcgcggtca cggccctgat ggaaggcacc cgcccggtgc
       61 tggtggaggt ccaggccctc gcggcgccgt cgggctacgg cacgccgcag cgggtcgcca
      121 ccggctacga cggccggcgc ctcgccctcc tcctcgccgt gctcgacaag cgcgccggcc
      181 tgtcgttcgg ccagctcgat gtctttctca acgtggtggg cggggtccgg ctgcaggagc
      241 cggcgggcga tctcgccgtg gccgcggcgc tcgcctccag cgtgtacgac cgcgcgctgc
      301 cgcacgaagc ggtgttcgtc ggcgaggtgg ggctcggcgg cgagatccgc ccggtatcgc
      361 aggccgatcg ccggctcgcc gaggcggcca acatgggaat gaccacggcg tatctcgccg
      421 agcgggccgt gcccaggcgc gtgccgaagg ggctcacggc cgtcggcgtg cgcaccatct
      481 ccgacctgtt cgagcgggtg ttccagtgag cgcgcccggg cccggggatg ccgcgcgcga
      541 cggggccgcg ctcatcgcgc cgcaccgcga cgtcggcgtc gtcatcgtgg ccggcggcgg
      601 tggcacgcgt gccggcggcg acgagctgaa gcagttccgc tgggtggcgg gcaagccgat
      661 gctgctgcac agcgtgcaga ccttcatggc gcggcccgac gtcggcatgg tggtggtcgt
      721 gctgccgcag cgctacgccg gcgatccccc gccatggctg ttccagtgcg acgtggaccg
      781 gctgctcgtg tcgctgggcg ggcgcacgcg gagcgagagc gtggcgaacg ggctggacga
      841 cctgccggac gaagcgcaga tcgtgctcgt gcacgacgcc gcgcggccgc tcgtcggcgc
      901 ggcgacgatc gaccgggtgg tggccgcggt gcgcgagggg aagagcgtcg tcgcggcctt
      961 gccggtggtg gacacgctga aggaagtgga cgacgagggg cgcatcgtgc gcacggtgcc
     1021 gcgcgagcgg ctctggcgcg cgcagacccc gcagggcttt ccgcgccggg tcatcgtgga
     1081 cgcgcaccgt cgcgcgaagg ccgaccgcgt ggacgccacc gacgacgcgg cgctgctgga
     1141 acggctcggg gtcccggtgc acgtcgtgcg cggcagcgag cgggcgctca aggtcaccga
     1201 gccggacgac ttcgcgcgca tcgacgcgct cttcgcgagc gcggaatgac ggcggaccgg
     1261 tcgctcggca tcccgttctg gtcgccggag gaggtcgcgg cggccatccg gcacgcgctc
     1321 gagcagatgg agctccggcg cgtgctcgcc taccccaccg agaccgtgta cggtttcggc
     1381 ggcgccatcg accgcgactc ggtgaacgcg ctgatccggc tcaagggtcg ccccaagggc
     1441 aaacccttcc tgctgctgat cgccggcagc gacatgctcg gaaagctcga cctgcagctc
     1501 cccagcttcg ccaccaacct ggcggcgcgc ttctggccgg gtccgctcac cctcgtgctg
     1561 ccgggcggag agaagcgggt gccggagccg ctgcgcggcc ccgagggagg gatcgcggtg
     1621 cggtggacct cgcacgcctc gttgcagcgg ctcatccggg cgcacggcga cgcgatcacc
     1681 tcgacgagcg ccaaccggcc aggggttccc cccgccacgt cggcgggtga gattcgagag
     1741 cagtggggcg acgcgctcgc gcgcggcgag ctccggctgc tcgatggggg gacgctgcgg
     1801 ccgtcgccgc cgtcgacggt ggtggactgc acgggccgcg cgccgcgcgt gatccggccg
     1861 ggcgcgatcg ccgccgcgcg gctgcgcgag atcgctcccc gcctcatcgg agacgcctga
     1921 cggccatgaa gctcctcttc gtctgcacgg gcaacacctg tcgcagcgcg ctcgccgagg
     1981 cgatcgcgcg gaaggtggcg atcgagcgcg ggcttcccga gatcgaggtc gccagcgccg
     2041 ggacgagcgc atgggacggc gcggccgcgt cggatggcgc catgctcgtg gggctcgagc
     2101 ggcggctcga cctcggcagt catcgctcgc agcagctcac gcgcgcgctc gtcgagtcca
     2161 gtgatctcat cttcacgatg ggcccgcacc acctggagcg ggtggaagcg ctgggcgcgg
     2221 gagacaaggc gtatctgctg acggcgtatc ccacccgcgg cgccaccggc cgcgcgatca
     2281 gtgaccccat gggcgcggag ctcgacgtct atcgcgcgac ggccgacgag ctggagtcgg
     2341 agatccggcg cgtgttcgac cgcctggcgg ccggacggac gcccgacgcg cagtga
//
LOCUS       DASSYW010000213         2340 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_335045, whole genome shotgun sequence.
ACCESSION   DASSYW010000213 DASSYW010000000
VERSION     DASSYW010000213.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2340)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2340)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2340
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_335045"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..594
                     /locus_tag="VFN38_03290"
     CDS             <1..594
                     /locus_tag="VFN38_03290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010808.1"
                     /translation="DEVRRVMVDAGVHMLDGDAVEIHGVGFAGVKGFAGGFGRGALGP
                     WGEPVIKLFVQEALNEALKLESALARLKTRHRIAVLHYSPVRGTVEGEPVEILPWLGS
                     SRLEEPLDRFEVSAVVHGHAHKGAHEGATSTGIPVYNVALEALRASDPDRPTFRIIEV
                     PREVEPSEAPHPRGRRASDRGPLAARIADAPDASAAR"
     gene            complement(599..1276)
                     /locus_tag="VFN38_03295"
     CDS             complement(599..1276)
                     /locus_tag="VFN38_03295"
                     /inference="COORDINATES: protein motif:HMM:NF022072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HET9010809.1"
                     /translation="MTPPPPASPAVQPRIAVPSLLLGILGGALFGARRRLPSHARAAA
                     TVGGVALVLAASHRPLAEAVRRAGTRRRSGRLSLSFVVAHPVEVVFGFCRDFENFPQF
                     IGALREVRDHGDGRSHWCASTPSGALIEWDTVTTKYVPNRVIAWTSVPGSAVETSARL
                     RFVPEGTDTCVSLDARYRVVEGTMSDALAALTTPPRRHEIERDVLRLGAYLDMLLARP
                     GAVELEA"
     gene            complement(1324..>2340)
                     /locus_tag="VFN38_03300"
     CDS             complement(1324..>2340)
                     /locus_tag="VFN38_03300"
                     /inference="COORDINATES: protein motif:HMM:NF014298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HET9010810.1"
                     /translation="PDCAARPVVDRVVAAPFDDPAGAAELARACDVVTLEIEQIAPAA
                     LEAALSHGPLRPGADLLRTVQHRGRQKQWLAAQGFPVGPHALVDSAAALGEAVRSIGP
                     DLFVKSCQGGYDGRSQIRLAAGDDTSLAFEQLGRREAVAEGALDLALELSVLVARRPG
                     GRELVVYPPAVNHHERQVLAWSVLPGELPPEVAREAQAIARGIAEAFALEGLLAIELF
                     LLRDGRLLVNELAPRPHNSYHASELGSPTSQFEQLVRAVCDLPLGAVEPARPAAIVNL
                     FGDLWDGGRTPDFAAALEVPGTRLFLYGKRGARPGRKMGHVGATGATSREALQRARDA
                     AARL"
BASE COUNT          326 a          853 c          892 g          269 t
ORIGIN      
        1 gacgaggtgc gccgcgtcat ggtcgatgcc ggcgtgcaca tgctcgacgg cgacgcggtc
       61 gagatccacg gggtcggctt cgccggcgtg aagggcttcg cgggcggctt cggccggggc
      121 gcgctggggc cgtggggcga gccggtgatc aagctgttcg tgcaggaggc gctcaacgag
      181 gcgctcaagc tcgaatccgc gctggcgcgg ctcaagacgc ggcaccgcat cgccgtgctg
      241 cactactcgc ccgtgcgcgg caccgtggag ggcgagccgg tcgagatcct cccctggctg
      301 ggatcgagca ggctcgagga gccgctcgac cggttcgagg tgagcgccgt ggtgcacggc
      361 cacgcgcaca agggagcgca cgagggggcg accagcacgg gaatccccgt ctacaacgtc
      421 gcgctcgagg cgctcagggc gagcgatccc gatcggccca ccttccgcat catcgaggtg
      481 ccgcgcgagg tcgagccgtc ggaggccccg cacccgcgtg gccggcgcgc gtccgaccgg
      541 gggccgctgg cggcgcggat cgccgacgcg cccgacgcga gcgccgcccg ctgaccgctc
      601 aggcttccag ctccaccgcg ccgggccgcg ccagcagcat gtcgaggtag gcgccgagcc
      661 ggaggacgtc ccgctcgatc tcgtgccgcc gcggcggggt cgtgagcgcc gcgagcgcgt
      721 cggacatcgt tccctccacc acgcggtagc gtgcatcgag gctcacgcag gtgtcggtgc
      781 cctcgggcac gaaccgcagc cgggcgctcg tctccaccgc cgaccccgga acgctggtcc
      841 acgcgatcac ccggttcggg acgtacttcg tcgtcaccgt gtcccactcg atcagggcgc
      901 cggacggcgt ggaggcgcac cagtgggatc gcccatcccc atggtcgcgc acctcgcgca
      961 gggcgccgat gaactgcggg aagttctcga agtcgcggca gaatccgaac acgacctcca
     1021 ccggatgcgc cacgacgaac gacaggctca gccgacccga gcgccggcgg gtgccggccc
     1081 ggcgcacggc ctcggcgagg ggtcggtgcg atgcggcgag gacgagcgcc accccaccga
     1141 cggtcgccgc cgcgcgcgca tgggagggca gtctgcggcg ggcgccgaag agcgccccac
     1201 cgaggatccc gagcagcagc gaaggtacgg cgatcctggg ctggacggcc ggcgaagcag
     1261 ggggtggggg ggtcatggcc gaaccagcga gcaagggggg tgccgtgcgg cgggaagccc
     1321 ccctcagagg cgcgccgcgg cgtcccgggc cctctggagg gcctcgcggc tggtcgctcc
     1381 cgtcgcgccc acgtgtccca tcttccgtcc gggccgggcg ccccgctttc cgtagaggaa
     1441 cagccgcgtg ccgggtacct cgagcgccgc cgcgaagtcg ggggtgcgcc ccccatccca
     1501 gaggtcgccg aacaggttca cgatggcggc aggccgcgcg ggctccacgg cgccgagcgg
     1561 caggtcgcac acggcacgca cgagctgctc gaactggctg gtgggcgagc cgagctccga
     1621 ggcgtggtag gagttgtggg ggcggggcgc cagctcgttc acgaggagcc ggccatcgcg
     1681 cagcaggaag agctcgatcg cgaggagccc ctcgagtgcg aaagcctcgg cgatcccgcg
     1741 cgcgatcgct tgcgcctcgc gcgccacctc ggggggcagt tcgccgggca gcacgctcca
     1801 ggcgaggacc tgccgctcgt ggtggttcac ggcggggggg tacacgacga gctcccggcc
     1861 gccgggccgg cgcgcgacga gcaccgagag ctccagcgcg aggtcgagcg ccccctcggc
     1921 caccgcctcc cgccggccga gctgctcgaa cgccagcgac gtgtcgtcgc ccgcggcgag
     1981 ccggatctgg ctgcgaccgt cgtacccgcc ctggcagctc ttcacgaaga gatcggggcc
     2041 gatggaccgc accgcctcgc cgagcgcggc ggcggagtcc accagcgcgt ggggacccac
     2101 gggaaatccc tgcgcggcga gccactgctt ctgccggccc cggtgctgca cggtgcgcag
     2161 cagatcggcg cccgggcgca gcggaccatg ggaaagcgcc gcctcgagcg ccgccggcgc
     2221 gatctgctcg atctccagcg tgaccacgtc gcaggcgcgc gcgagctcgg cggctcccgc
     2281 ggggtcgtcg aacggtgccg cgaccacgcg gtccaccacc gggcgggcgg cgcaatcggg
//
LOCUS       DASSYW010000214         2109 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1331953, whole genome shotgun sequence.
ACCESSION   DASSYW010000214 DASSYW010000000
VERSION     DASSYW010000214.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2109)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2109)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2109
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1331953"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2109
                     /locus_tag="VFN38_03305"
     CDS             <1..>2109
                     /locus_tag="VFN38_03305"
                     /inference="COORDINATES: protein motif:HMM:NF024907.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CRTAC1 family protein"
                     /protein_id="HET9010811.1"
                     /translation="RLFGMQGGFARDITSRSGIALPGGSAYATFADVDNDGWLDLFVI
                     GGEGKGHLLHNRGDGGFEEVTPKAGLDDVRGARKALFVDLDHDGDLDLLLVGGSQRTV
                     YRNNLDGTFTESTDAFGLGGGGAYDAAFGDFDGDGRIDLVMTDVKGGVAMFHNGGAQR
                     FSDVTATSGLRGSGGTGAVAVGDYDNDGRLDVLATSRTGGEATLWHNRGDGTFARDAA
                     SDALKPARGTSVLAADFVDYGNDGWLDLLLVGAPPSGGRGVYLLRNDRGRFTDRSSAL
                     PASVRSGTALTVSDVDDDGDEDLLLADSTGTVHLLRNDGGNANMAVRVQLKGLRTGSG
                     KNNDFGIGARLELRAGELHQTRVATGRVTHFGLGPHLKADVLRVEWPNGVPQTVYFPG
                     TDKDVVEQEMLKGSCAFAYTWDGTRFRFVTDVMWRSALGMPLVLMAGGASTAFAPAGA
                     SQEYLRIPGDALKPKDGKYLLQLTEELWETAYADEVKLIAVDHPDSVDVFVDERFVPP
                     GPVTLRPYQVGQRHLPLSAVDERGDDLLPALRESDDVYVSNLTPTRYQGVVEPHDLVL
                     DLGADAGQPGSYLFLRGWIYPTDASINVVLSQQSAIKLSPPSLEVRDARGRWTTAVAS
                     LGFPSGKSKTMVIDLAGKFPTKDHRVRIRTNMQIYWDHAFVGQRLPYGAAKVRTLEPR
                     SADLHYRGFSRMFRKGGRYGP"
BASE COUNT          326 a          729 c          747 g          307 t
ORIGIN      
        1 agactgttcg gcatgcaggg gggcttcgcg cgggacatca cctcgcgcag tggcatcgcg
       61 cttcccgggg gctcggcata cgccactttc gccgacgtgg acaacgacgg ctggctcgac
      121 ctgttcgtga tcggtggcga gggaaagggg cacctgctgc acaaccgcgg cgacggcggc
      181 ttcgaggagg tgacgccgaa ggccggcctc gacgatgtgc gcggcgcgcg caaggcgctt
      241 ttcgtggacc tcgatcacga cggcgacctg gatctcctgc tcgtgggcgg cagccagcgg
      301 acggtctacc gcaacaatct cgacggcacc ttcaccgagt ccaccgacgc gttcgggctc
      361 ggcggcggag gggcctacga tgcggcgttc ggcgacttcg acggcgacgg ccgcatcgat
      421 ctcgtgatga ccgacgtgaa gggcggcgtg gcgatgttcc acaatggcgg cgcgcagcgc
      481 ttcagcgacg tcaccgcaac gagtggcctg aggggcagcg gcggcaccgg cgcggtggcc
      541 gtgggcgact acgacaacga cggccgcctc gacgtgctcg cgacgagccg caccgggggc
      601 gaggcgacgc tctggcacaa caggggcgac gggaccttcg cgcgcgatgc cgccagcgac
      661 gcgctgaagc cggcgcgcgg cacgtcggtg ttggccgccg acttcgtgga ctacggcaac
      721 gacgggtggc tcgacctgct cctcgtcggc gcgccaccga gcgggggccg cggcgtctac
      781 ctcctgcgca acgaccgtgg ccgcttcacc gaccggtcga gcgcactgcc ggcgtcggtg
      841 cggtcgggca ccgcgctcac cgtgagcgac gtcgacgacg atggcgacga ggacctgctc
      901 ctcgccgact cgaccggcac cgtgcacttg ctgcgcaatg acggtggcaa cgcgaacatg
      961 gcggtgcgcg tgcagctcaa gggactgcgc accggaagcg gcaagaacaa cgacttcggc
     1021 atcggcgccc ggctggagct gcgcgccggc gagctgcacc agacgcgcgt cgccacgggg
     1081 cgcgtgacgc acttcggcct gggcccgcac ctcaaggccg acgtgctgcg cgtcgagtgg
     1141 cccaacggcg tcccgcagac cgtctacttc cccggcaccg acaaggacgt cgtcgagcag
     1201 gagatgctga agggctcgtg cgccttcgcg tatacctggg acggcacgcg cttccgtttc
     1261 gtgaccgacg tgatgtggcg cagcgcgctc ggcatgccgc tcgtcctgat ggcggggggc
     1321 gcgtcgacgg cgttcgcgcc ggccggggcg tcgcaggaat acctgcgcat ccccggcgac
     1381 gcgctcaagc cgaaggatgg caagtatctc ctgcagctca ccgaggagct gtgggagacg
     1441 gcgtacgccg acgaggtgaa gctgatcgcc gtcgatcatc ccgactcggt ggatgtcttc
     1501 gtcgacgaac ggttcgtgcc gcccggcccg gtgacgctgc gcccatatca ggtcgggcag
     1561 cggcaccttc cgctgtccgc cgtggacgag cgtggcgacg acctgctccc cgcgctccgc
     1621 gaaagcgacg acgtctacgt ctcgaacctc acgccgacgc ggtatcaggg cgtcgtggag
     1681 ccgcacgacc tcgtgctcga cctcggtgcc gacgccggcc agccgggctc gtacctcttc
     1741 cttcgcggct ggatctaccc gaccgacgcg agcatcaacg tcgtcctctc gcagcagagc
     1801 gccatcaagc tctcgccccc gtcgctcgaa gtgcgcgacg cgcgcggccg ctggacgacg
     1861 gcggtggcga gcctcggctt cccgtcgggg aagagcaaga cgatggtgat cgatctcgcc
     1921 gggaagtttc ccacgaagga tcaccgcgtg cgcatccgca cgaacatgca gatctactgg
     1981 gatcacgcgt tcgtcggaca gcgcctgcct tacggcgcgg caaaggtgcg gacgctcgag
     2041 ccgcgatccg ccgatctcca ctatcgcggc ttctcgcgga tgttccgcaa gggcggccgc
     2101 tacgggccg
//
LOCUS       DASSYW010000215         2213 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_219998, whole genome shotgun sequence.
ACCESSION   DASSYW010000215 DASSYW010000000
VERSION     DASSYW010000215.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2213)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2213)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2213
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_219998"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..269)
                     /locus_tag="VFN38_03310"
     CDS             complement(<1..269)
                     /locus_tag="VFN38_03310"
                     /inference="COORDINATES: protein motif:HMM:NF025719.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RsbRD N-terminal domain-containing protein"
                     /protein_id="HET9010812.1"
                     /translation="MISGKVLAEVLRADEDLLLRDWVEVQLTTRGTRSELLSRQELLD
                     QSGQFLRALVDAVGAGGVDVSGPAYAALRQQMEEVSSARARQGYTP"
     gene            complement(272..1459)
                     /locus_tag="VFN38_03315"
     CDS             complement(272..1459)
                     /locus_tag="VFN38_03315"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hybrid sensor histidine kinase/response
                     regulator"
                     /protein_id="HET9010813.1"
                     /translation="MDDNDASRYARMRWLTDTGHTVFEADRLAKADVLVRETRPDLIV
                     LDINLPDGNGLDYCRTLKQDDELRTVMVLQMSASFVSNEDHARGLEAGADAYLTDPVA
                     PAVFVATVNALLRLSRAERALKDLLEREQMARTEAEAANRLKDDFLATLSHELRTPLN
                     AIVGWTTLMRTIEMDDDARRRAIEIIERNAKSQAALIEDLLDVSRITQGQLQLAWLTV
                     HVPAIVAAAIDTVRPSADAKGLELVTEITADPRATVLGDPVRLQQVIWNLLSNAVKFT
                     DARGARRGSVRAAVALVDDVVEVRISDNGRGIRTEFLPLVFERFRRADAGLTRAEGGL
                     GLGLAIARQLVELHGGTLTAASEGEDRGATFVVRLPSQPASNGRRENASGPAGRFAKE
                     TPS"
     gene            complement(1485..>2213)
                     /locus_tag="VFN38_03320"
     CDS             complement(1485..>2213)
                     /locus_tag="VFN38_03320"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HET9010814.1"
                     /translation="LFYEKILKHTLYQHFGVRSLPDARQALSRIRPAAIILDILLQSE
                     ESWTFLCQLKDSPETRDIPIVVVSTVNDAAKVHALGANAFALKPVDRPWLLETLGALT
                     SSRAMRVLIADDQEVMRVVIEQFLDSRRYTAIRAASGLEALEKAHSERPDAILLDLGL
                     PDLNGREVLQRLKADSATASIPVVIVTSARLDTAERDAILTSAVDIVAKDSLTRDAVN
                     GALQRALAAPARAAEPGSLTRHGA"
BASE COUNT          322 a          785 c          765 g          341 t
ORIGIN      
        1 ggggtgtagc cctggcgcgc gcgcgcgctc gacacctcct ccatctgctg gcggagggcc
       61 gcgtaggcgg ggccgctgac gtcgacgccg ccagcgccga ccgcgtcgac aagcgcacgc
      121 aggaactgcc ccgactgatc cagcagttcc tgccgcgaga gcagctcgct gcgcgtgccc
      181 cgcgtcgtca gctgcacttc cacccagtcc cgcagcagaa ggtcttcgtc cgctctgagc
      241 acctccgcca acactttccc cgagatcatc gtcacgatgg cgtctccttg gcgaaccgtc
      301 ccgccggccc gctggcgttc tcgcggcggc cgttcgacgc cggctgcgat ggcagtcgca
      361 cgacgaacgt cgcccccctg tcttcccctt cgctcgcggc ggtgagcgtg ccgccgtgca
      421 gctcgacgag ctgccgcgcg atcgccaggc cgagccccag cccgccctcg gcgcgcgtca
      481 gaccggcgtc cgcgcgccgg aaccgctcga acaccagcgg caggaactcg gtcctgatcc
      541 cgcgcccgtt gtcgctgatg cgcacctcga cgacatcgtc gacgagcgcc acggccgcac
      601 ggacggagcc gcgccgcgcg ccgcgcgcgt cggtgaactt gacggcgttc gacaacaggt
      661 tccagatgac ctgctgcagc cgcaccgggt cgccgagcac cgtcgcgcgc gggtcggcgg
      721 tgatctcggt gacgagctcc agccccttgg cgtcggcgct cggccgcacg gtgtcgatcg
      781 cggcggcgac gatcgccggc acgtgcaccg tcagccacgc gagctgcagc tgcccctgcg
      841 tgatgcgcga tacgtcgagc agatcctcga tcagcgccgc ctgcgacttg gcgttgcgct
      901 cgatgatctc gatggcgcgc cggcgcgcgt cgtcgtccat ctcgatggtg cgcatcagcg
      961 tcgtccagcc gacgatcgcg ttgaggggcg tgcgcagctc gtgcgacagc gtcgcgagga
     1021 agtcgtcctt gagccggttg gccgcttcgg cctcggtgcg cgccatctgc tcgcgctcga
     1081 gcaggtcctt cagcgcgcgc tcggcgcggc tcaggcgcag gagcgcgttc accgtcgcga
     1141 cgaagacggc cggcgcgacc ggatcggtga gataggcgtc ggcgccggct tccagcccac
     1201 gcgcgtgatc ctcgttcgac acgaagctcg ccgacatctg caggaccatc accgtccgca
     1261 gctcgtcgtc ctgcttgagc gtcctgcagt aatcgaggcc gttgccgtcg ggaagattga
     1321 tgtcgaggac aatcagatcc ggccgggtct cgcgcacgag gacgtccgcc ttggcgaggc
     1381 gatccgcctc gaacaccgta tggccggtgt cggtgagcca gcgcatgcgc gcatagcggc
     1441 tcgcatcgtt gtcgtccacg atgaggatcc gccctggagc gggcttaggc gccatggcgg
     1501 gtcagggagc ccggctcggc tgcgcgcgcc ggcgccgcga gcgcgcgttg aagggcgccg
     1561 ttgacggcgt cgcgcgtcag cgaatccttc gccacgatgt ccactgccga cgtcaggatc
     1621 gcgtcgcgct ccgccgtgtc gagccgcgca gaggtgacga tgacgacggg gatggaggcg
     1681 gtggcggaat ccgccttgag ccgctgcagc acctcgcggc cgttcagatc gggcaggccg
     1741 aggtcgagca ggatcgcgtc ggggcgctcg ctgtgcgctt tctcgagcgc ctccaggccg
     1801 gacgccgccc gaatcgccgt gtagcgccgc gaatcgagga actgctcgat cacgacccgc
     1861 atcacctcct gatcgtcggc gatcagcacg cgcatcgcgc gcgacgaggt cagcgcgccg
     1921 agcgtctcga gcagccacgg gcgatccacc ggcttgagcg caaacgcatt cgcgccgagg
     1981 gcgtgcacct tcgcggcgtc gttgacggtg ctgacgacga caatcggaat gtcacgcgtc
     2041 tccggcgagt ccttgagctg gcagagaaac gtccacgact cctcggactg cagcaggatg
     2101 tcgaggatga tggccgccgg gcgaatccgc gacagcgcct ggcgcgcatc cggcagggag
     2161 cgcacgccga agtgctgata gagggtgtgc ttgaggatct tctcgtagaa gag
//
LOCUS       DASSYW010000216         2065 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_730809, whole genome shotgun sequence.
ACCESSION   DASSYW010000216 DASSYW010000000
VERSION     DASSYW010000216.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2065)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2065)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2065
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_730809"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..632
                     /locus_tag="VFN38_03325"
     CDS             <1..632
                     /locus_tag="VFN38_03325"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HET9010815.1"
                     /translation="SLPGGAAKTSRKGCGEFEIVAHGIAAHAGLNPAAGASAIHELAR
                     QIIDVQALQDAARGITVNAGTIVGGSRANVVADTARAVIDVRVPAMADAVAIEAAFAS
                     LRPHDRRVRLEVTGAIARPPLERSRAVATLFALAQEVAGGLGRALGEGTAGGGSDGNF
                     TAAIGVPTLDGLGPRGDGAHALHEHVDLQDLPWRAAFLAALLRRIGGVQ"
     gene            637..1473
                     /locus_tag="VFN38_03330"
     CDS             637..1473
                     /locus_tag="VFN38_03330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc metalloprotease HtpX"
                     /protein_id="HET9010816.1"
                     /translation="MPNGLKTALLLGALSGLLLVVGDLLGGSSGIMIALIFAAVMNLG
                     SYWFSDKIVLRMYGAQPVGPEHPLYRMTERLSRQARLPMPRVFVIQDPSPNAFATGRN
                     PQHAAVAATSGIMQALSEPELEGVLAHELAHVKNRDTLTSSIAATIAAAIVGVGRMLM
                     YAGMFGGRSDDREGGSNPIALLAMMILAPLAATMIQMWISRTREFAADAEGARIAGTP
                     YGLADALRKIDAIAKRVPLDANPATAHMFIIKPFLGGGLMSLFSTHPPTEARIKALLE
                     SR"
     gene            1702..>2065
                     /locus_tag="VFN38_03335"
     CDS             1702..>2065
                     /locus_tag="VFN38_03335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010817.1"
                     /translation="MIDIDFDIPRNRLAESAERVVDRALDDARRREHAVLTNEHVCLA
                     FAQVEWDTFGQLMQDVQLNPHQILHALEDHMNALPTASGRELRVAQSTKLLFKLAMLH
                     SSRSGRHTVEATDLFSAIF"
BASE COUNT          310 a          715 c          718 g          322 t
ORIGIN      
        1 cgtcgctgcc gggaggagcg gcgaagacga gccgcaaggg atgcggcgag ttcgagatcg
       61 tcgcgcacgg catcgccgcg cacgccggat tgaaccccgc agccggcgcg agcgccatcc
      121 acgagctcgc gcggcagatc atcgatgtgc aggcactgca ggatgcggcg cgtgggatca
      181 cggtgaacgc cggcacgatc gtcggcggct cgcgcgcgaa cgtcgtcgcc gatacggcac
      241 gtgcggtgat cgacgtccgc gtcccggcga tggcggatgc ggtcgcaatc gaggccgcgt
      301 tcgcgtcgct gcgcccgcac gatcgccgcg tccggctgga ggtcacgggc gcgatcgccc
      361 ggccgccgct cgagcggagc cgcgcggtcg cgacgctgtt tgcgctggcg caggaggtgg
      421 ccggcggtct cggccgcgcg ctcggggagg gaaccgccgg cggcggctcc gacgggaatt
      481 tcacggccgc catcggggtt cctactcttg acggactcgg ccctcgcggc gacggcgccc
      541 acgcgctcca cgaacacgtc gacctgcagg atttaccctg gcgcgcggcg tttctggcgg
      601 cgttgctgag gcgtatcggg ggagtacagt agaaccatgc ccaatggctt gaagacggcg
      661 ttgttgctcg gcgcgctcag cgggctgctg ctcgtcgtcg gcgacctgct cggcggctcc
      721 agcggcatca tgatcgccct gatctttgcg gcggtgatga acctcgggtc gtactggttt
      781 tcggacaaga ttgtcctgcg catgtacggc gcgcagccgg tcggccccga gcatccgctc
      841 taccggatga cggaacggct gtcgcggcag gcccgcctgc cgatgccgag ggtcttcgtg
      901 atccaggatc cgtcgccgaa cgcgttcgcg accggccgca atccgcagca cgcggcggtg
      961 gcggcgacct cgggcatcat gcaggcgctc tccgagcccg agctcgaggg cgtgctcgcg
     1021 cacgagctgg cgcacgtgaa gaaccgtgac acgctgacca gctcgatcgc cgcgaccatc
     1081 gccgccgcca tcgtcggcgt cggacggatg ctgatgtacg ccggcatgtt cggcggccgc
     1141 agcgacgatc gcgagggcgg ctcgaacccg attgcgctgc tggcgatgat gatcctcgcg
     1201 ccgctggcgg caacgatgat tcagatgtgg atctcgcgca cgcgcgagtt cgccgccgac
     1261 gccgaaggcg cgcgcatcgc cggcaccccg tatggtcttg cagacgcgct gcgtaagatc
     1321 gacgcgatcg ccaagcgcgt gccgctcgac gcgaacccgg cgacggcgca catgttcatc
     1381 atcaaaccct tcctcggggg cgggctgatg tcactcttca gcacgcaccc gccgactgaa
     1441 gcgcgcatca aggcgctgct cgagagccgc tgagagcgcc cggacatccc caggtgaccc
     1501 accgacaggg acgcggtggg tcacacgcgg gctactcgcc gccgcggtgc tcacctctgg
     1561 gcagtccgcc cctcttttat cctccccctt gcgcgaccga ctttagtcgg cgctgagcac
     1621 gacttttgct gccgccatga gcggtggagc tgttccgtcg gggacggcat gacgccgcca
     1681 gggattttcg gggaggcagc cgtgatcgac atcgacttcg acattccgcg gaaccgactg
     1741 gctgagtcgg ccgaacgcgt ggtggaccgc gcgctcgacg acgcgcgccg ccgcgagcac
     1801 gccgtcctga ccaacgagca cgtctgcctc gccttcgcgc aggtcgagtg ggacacgttc
     1861 ggccagctca tgcaggacgt ccagctcaat ccgcaccaga tcctgcacgc gctcgaagac
     1921 cacatgaacg cgctgccgac cgcgtcgggc cgcgagctgc gggtggcgca gtcgaccaag
     1981 ctgctcttca agctggcgat gctgcactcc agccgctcgg gccggcatac ggtggaggcg
     2041 accgacctgt tctccgcgat cttcg
//
LOCUS       DASSYW010000217         2364 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1700305, whole genome shotgun sequence.
ACCESSION   DASSYW010000217 DASSYW010000000
VERSION     DASSYW010000217.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2364)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2364)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2364
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1700305"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1586
                     /locus_tag="VFN38_03340"
     CDS             <1..1586
                     /locus_tag="VFN38_03340"
                     /inference="COORDINATES: protein motif:HMM:NF013206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="gamma-glutamyltransferase family protein"
                     /protein_id="HET9010818.1"
                     /translation="ATSTRPAPRRSASPSAPWTKGVEPLAAILRDGGTAADACIAMDA
                     VLHVTEPTSTGLGGDAFALHFEGATGRVTALNASGRSPAALTLDAVRAAGPDGPPPSH
                     GLWVTVPGCCAGWADLAARHGSMPLARLLEPAIRLASDGFAVGPVTAAIWGRGLAQLQ
                     SEELTIGGRAPAAGETFRNPGLARTLRAIAEGGSEAFYTGAIALAIANAVEQAGGVMT
                     TADLAAHASTWDEPIEATYRGTRVWQCPPNGQGIVALLALNLLEGFAIGAPDDPRRWH
                     LEIEALRLAFADARWWVSDPACGAPPVEALLSKEYAAERRALIDPAGATLDAKRGSPV
                     HRGGTVYHCAVDSRGDACSMVSSHFMGFGSGVVPAGLGFVLHNRALGFALDPAHPNVV
                     APGKRPYHTITPALLTRADGALWGPLGVMGGFMQPQGHVQLVTALVDDGAAPQEALDR
                     PRFYLDAGVAGGRVKLEEGVPAGVVAGLEALGHEVDAGVPSYGRALFGRGQIILREPD
                     GGLRGGSDRRADGCALGVS"
     gene            1625..>2364
                     /locus_tag="VFN38_03345"
     CDS             1625..>2364
                     /locus_tag="VFN38_03345"
                     /inference="COORDINATES: protein motif:HMM:NF018743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1343 domain-containing protein"
                     /protein_id="HET9010819.1"
                     /translation="MPVGRRLISLVLASAACAPGATPRPATSASPASAAVRVGLDVFL
                     DSVPAWAEGKRLGLITNNAGVDASGRSNIERLTARHDVKLVTLFAFEHGIRGDAPAGA
                     HIANEVDARSGLPVYSLYGDVQKPTPEMLAGVDLLLYDVQDVGARPYTRVSTMALSMK
                     AAAERGIPFVVLDRPNPLGGIEMEGPVLEPAFASFVGMYPIPLRHGMTLGELARLYNA
                     RFGIGADLRVIPMRGWRRETPFSATGLP"
BASE COUNT          283 a          857 c          903 g          321 t
ORIGIN      
        1 aggcgaccag cacgcgcccg gcgccgcgcc gcagcgcctc gccgagcgcg ccgtggacga
       61 agggggtcga gccgctggcc gcgatcctgc gcgacggtgg cacggcggcc gacgcctgca
      121 tcgcgatgga cgccgtgctc cacgtgaccg agccgacgtc caccggactc ggtggcgacg
      181 cgttcgcgct gcacttcgag ggcgccaccg gccgcgtcac ggcgctcaac gcctccgggc
      241 gctcgcccgc cgcgctgacg ctcgacgccg tgcgcgccgc cggtcccgac ggaccgccgc
      301 cgtcgcacgg gctctgggtg acggtgcccg gatgctgcgc gggctgggcg gaccttgccg
      361 cgcgccacgg ctcgatgccg ctcgcgcgcc tgctggagcc ggcgatccgg ctcgccagcg
      421 atgggttcgc ggtcggcccg gtgacggccg cgatctgggg gcgcggcctc gcgcagctgc
      481 agtcggagga gctgacgatc ggcgggcggg cgccggcggc gggagagacc tttcgcaacc
      541 cggggctcgc gcgcacgctg cgcgcgatcg ccgagggggg gagcgaggcg ttctatacgg
      601 gggcgatcgc gctcgcgatc gccaacgccg tggagcaggc cggcggcgtg atgaccacag
      661 ccgacctggc ggcgcacgcg tccacctggg acgagccgat cgaggcgacg taccgtggca
      721 cgcgcgtctg gcagtgtccc cccaacggcc agggaatcgt cgcgctgctc gccctcaacc
      781 tgctcgaggg cttcgcgatt ggcgcgcccg acgacccgcg gcggtggcac ctcgagatcg
      841 aggccctccg cctcgccttc gccgacgcgc gctggtgggt gagcgacccg gcgtgcggcg
      901 cgccccccgt cgaggcgctg ctctcgaagg agtacgccgc cgagcggcgc gcgctgatcg
      961 atcccgcggg cgcgacgctg gatgcgaagc gcggctcgcc cgtgcaccgc ggggggaccg
     1021 tctaccactg cgcggtggac tcgcgcggcg acgcctgctc gatggtcagc tcgcacttca
     1081 tgggcttcgg atcgggggtg gtgccggcgg ggctcggctt cgtgctccac aaccgcgccc
     1141 tcggcttcgc gctcgatccc gcgcacccca acgtcgtcgc gccgggcaag cgtccctacc
     1201 acacgatcac gccggcgctg ctcacgcgcg ccgacggcgc gctctggggt ccgctcggcg
     1261 tcatgggggg cttcatgcag ccgcagggcc acgtgcagct cgtgaccgcg ctggtggacg
     1321 acggcgccgc gccgcaggag gcgctcgacc ggccccgctt ctatcttgat gccggtgtcg
     1381 ccggcggccg cgtgaagctc gaggaaggag tgcccgccgg agtggtcgcc gggctcgagg
     1441 cgctgggcca cgaggtggac gccggcgtcc cgtcgtacgg gcgcgcgctg ttcggccgcg
     1501 ggcagatcat cctgcgcgag ccggacggcg ggttgcgagg agggagcgat cgccgcgccg
     1561 atggttgcgc gctgggggtc tcgtgatcgc gggaacgtca ttcacgtcat tcacccacgt
     1621 gcgcatgccg gtcgggcgtc gtctcatctc cctcgttctc gcgagcgcgg cctgcgcgcc
     1681 aggcgccaca ccgcggccag cgacgagcgc ctctcccgcc agcgcggcgg tgcgcgtcgg
     1741 cctcgacgtc ttcctcgaca gcgtgcccgc ctgggcggag gggaagcggc tcgggctgat
     1801 cacgaacaac gccggcgtgg acgcgtcggg gcgcagcaac atcgagcggc tgacggcgcg
     1861 gcacgacgtg aagctggtga cgctcttcgc cttcgagcac gggatcaggg gggacgctcc
     1921 cgccggcgct cacatcgcga acgaggtgga cgcgcgcagc gggcttcccg tgtactcgct
     1981 ctatggcgac gtgcagaagc cgacgcccga gatgctcgcc ggggtggacc tgctgctcta
     2041 cgacgtgcag gacgtggggg cgcggccgta cacgcgcgtc tcgacgatgg ccctctcgat
     2101 gaaggcggcc gccgagcggg ggatcccgtt cgtcgtcctc gaccggccga acccgttggg
     2161 cggcatcgag atggagggac cggtgctgga gccggcgttc gcctccttcg tcggcatgta
     2221 cccgatcccg ctgcggcacg ggatgacgct cggcgagctg gcgcgcctgt ataacgcgag
     2281 attcggcatc ggcgccgacc tgcgggtgat cccgatgcgc ggctggcggc gcgagacgcc
     2341 gttctcggcg accggcctcc cctg
//
LOCUS       DASSYW010000218         2192 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_993769, whole genome shotgun sequence.
ACCESSION   DASSYW010000218 DASSYW010000000
VERSION     DASSYW010000218.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2192)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2192)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2192
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_993769"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..554
                     /locus_tag="VFN38_03350"
     CDS             <1..554
                     /locus_tag="VFN38_03350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010820.1"
                     /translation="RAVVAACATGVAFAACVSGAGEGLAPRVADEATSYAVQRLAVDS
                     LFNGREHASRLVLWASDAGDGPVFEALDSLIPKRTTPRAIDAARLGGSLPSRVMTEAA
                     LAELFRQNPDGWAAFFRENPAAAGLVELSPVRVSPDGRTATTYVGRSCGEHCRNAWVL
                     TARRQASGPWTIAKLQWLRVPGA"
     gene            634..1239
                     /locus_tag="VFN38_03355"
     CDS             634..1239
                     /locus_tag="VFN38_03355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010821.1"
                     /translation="MSLSHVFFDIGGVLGTNGWDREQRARALQKFSVEEEDFEHRHHQ
                     VVSEFETGAMSLEEYLDVTVFYTPRLFSREDFELYMLSLSEPNPYSIQIAKHIAAAAR
                     VRLMTMNNESAVLNVYRIDRFGLKDIFQTFLSSCWLGCRKPQRMFFERGLGIAQADAA
                     SSLLIDDRDQNLAPAAALGMHTIRFTDPESLARDLVGYGVL"
     gene            1341..1607
                     /locus_tag="VFN38_03360"
     CDS             1341..1607
                     /locus_tag="VFN38_03360"
                     /inference="COORDINATES: protein motif:HMM:NF040444.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6496 domain-containing protein"
                     /protein_id="HET9010822.1"
                     /translation="MATAKGKSTSKRSSGRRKYGSAASKRVESAMRRRKKGTLKSGRG
                     GKGGTVKSRKQAIAIGLSEARAKGAKVPRKRTGKRATKRSARKK"
     gene            complement(1683..>2192)
                     /locus_tag="VFN38_03365"
     CDS             complement(1683..>2192)
                     /locus_tag="VFN38_03365"
                     /EC_number="4.2.2.n1"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016798 - hydrolase activity, acting on
                     glycosyl bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HET9010823.1"
                     /translation="RTTGITPGRADSVATFAVREAYRRRVPPALVFGVLMVENQDLKS
                     SATSNAGAVGLMQIDASTWVHSLGKRFGTNLRNDETNLRYGVFILSHLLYDSDDDRAP
                     ADSATVHGSLRRGLLRYNGCVRGTNTKNCFRYPEIVRTRIDTLAISQCGWRGYERCVA
                     EPLRYALDD"
BASE COUNT          359 a          696 c          782 g          355 t
ORIGIN      
        1 tgcgcgccgt cgtggctgcg tgcgcgacgg gtgtggcgtt cgccgcgtgt gtttcgggag
       61 caggggaagg cctggcgcca cgggtcgcgg acgaggcgac ctcgtatgcc gtccagcggc
      121 tcgccgtcga ttcgctgttc aacggtcgcg agcatgcgtc tcggctcgtg ctgtgggcat
      181 ccgacgccgg ggacgggccg gtattcgagg cgctcgactc gctcattccg aagcggacaa
      241 ctccgcgcgc gatcgatgct gcacgcctcg gtggatcact tccctcgcgc gtcatgaccg
      301 aagcggcgct cgcagagctg ttccgtcaga acccggatgg ctgggccgcg ttcttccgcg
      361 agaacccggc ggccgcgggg ctcgtcgagc tgtcgcctgt ccgcgtgtcg ccggacggcc
      421 gtacagccac gacctacgtc ggacgaagct gcggcgaaca ctgtcgcaac gcgtgggtgc
      481 tcactgcgcg gcgtcaggcg agcggaccgt ggacgatcgc gaagctccag tggcttcgcg
      541 tgccgggcgc gtgaagcgca cggtggttgg cgtcggcgcc tcctgccgag ccgactggcg
      601 ctgcagattc cggcatccgc atcggagctg gcattgtcac tcagtcacgt gttcttcgac
      661 atcggcggcg tcctcggcac aaacgggtgg gaccgggagc agcgcgcgcg agcgctgcag
      721 aagttcagcg tcgaggagga agacttcgag catcgccacc atcaggtcgt gagcgagttc
      781 gagaccggcg cgatgtcgct cgaggagtat ctcgatgtga ccgtgttcta cacgccgcgg
      841 ctcttctcgc gcgaggattt cgagctgtac atgctctccc tcagcgagcc gaatccgtac
      901 tcgatccaga tcgcgaagca catcgccgcc gcggcccggg tccgtctcat gacgatgaac
      961 aacgagtcgg cggtgctgaa cgtctaccgc atcgaccgct tcgggttgaa ggacatcttc
     1021 cagacttttc tcagctcgtg ctggctcgga tgccgcaagc cgcagcggat gttcttcgag
     1081 cgcgggctcg gcatcgcgca ggccgacgcg gcgtcgtcgc tgctgatcga cgatcgcgat
     1141 cagaacctcg cgccggccgc ggcgctcggc atgcacacca tccgcttcac ggacccggag
     1201 tccctcgcgc gggatctggt cggctacgga gttctgtagc aggccagcga ccgcaaaagc
     1261 tgttggatgc gggcgtgtat ggctggcttc ttgccgcctt cgtggtgcca agcacgccaa
     1321 cctcaatccg gggtgagcct atggcaaccg caaagggaaa gagtacgtcg aagcgatcga
     1381 gcgggcggag gaagtatggg agcgcggcat cgaagcgcgt cgagagcgcg atgcgacgcc
     1441 gcaagaaggg aacgctgaag agcggccgcg gggggaaggg cggaaccgtg aagagccgca
     1501 agcaggccat cgccatcggt ctgtccgagg cgcgcgcgaa aggcgcgaag gtgccgcgca
     1561 agcggaccgg caagcgcgcc acgaaacgct cggcgcgaaa gaaataggag cggatgcgga
     1621 cgaccccggg atcgctcgtt aggcgtcccg gggtcgatcg catcgcggac cggcagggcg
     1681 agctagtcgt cgagcgcgta cctcagcggc tcggccacgc agcgctcgta gccgcgccat
     1741 ccgcactgcg agatggcgag cgtgtcgatg cgggtgcgga cgatctccgg gtaccggaaa
     1801 cagttcttcg tgttcgtccc gcgcacgcag ccgttgtagc gcagcagccc tcgccgcagc
     1861 gatccgtgca cggtggccga gtcggccggc gcacggtcgt cgtcgctgtc gtagagcagg
     1921 tggctgagga tgaagacgcc gtagcggagg ttcgtctcgt cgttccggag gttcgtgccg
     1981 aatcgcttgc cgagcgagtg cacccacgtg ctggcgtcga tctgcatgag acccacggca
     2041 ccggcgttcg acgtcgcgga agacttgagg tcctggttct cgaccatcag cacgccgaag
     2101 acgagtgccg gcggaaccct gcgccgatag gcctcgcgaa ccgcgaacgt cgcgacggag
     2161 tccgcccggc ccggggtgat gccggtcgtg cg
//
LOCUS       DASSYW010000219         3234 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1237638, whole genome shotgun sequence.
ACCESSION   DASSYW010000219 DASSYW010000000
VERSION     DASSYW010000219.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3234)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3234)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3234
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1237638"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..656)
                     /locus_tag="VFN38_03370"
     CDS             complement(<1..656)
                     /locus_tag="VFN38_03370"
                     /EC_number="4.1.99.1"
                     /inference="COORDINATES: protein motif:HMM:NF009709.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophanase"
                     /protein_id="HET9010824.1"
                     /translation="MRQHSWAEPWKIKVVEPLRITSRAERERAIRDAGHNTFLLRSDD
                     VYIDLLTDSGTNAMSDRQWAGMMLGDEAYAGSRNFYHLEEAVQRHYGFPHLIPTHQGR
                     GAEHILSRMLIEPGDHVPGNMYFTTTRAHQELAGGQFHDIIIDEAHDPRSEHPFKGNV
                     DLAKLAAIVERVGADRVPYVSVAATVNMAGGQPISLANLRAVREYTRQHDILLILDAT
                     R"
     gene            855..2084
                     /gene="ilvA"
                     /locus_tag="VFN38_03375"
     CDS             855..2084
                     /gene="ilvA"
                     /locus_tag="VFN38_03375"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: protein motif:HMM:TIGR01127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004794 - L-threonine ammonia-lyase
                     activity [Evidence IEA];
                     GO_process: GO:0006549 - isoleucine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase"
                     /protein_id="HET9010825.1"
                     /translation="MPTLAGIRAARERIHDGIVATPVVPALALRDRLPCALHLKLENA
                     QRTGSFKDRGALNRLLDLGADERRRGVVTASAGNHAQAVAYHGARLGVSVEVVMPEQT
                     PLIKVANTRRFGAGVRFHGATLSEAMTEARRIEAEQGRVLVHAFDDERVIEGQGTIGL
                     ELLEQLPEVTAVVVPIGGGGLIAGIAAAIREQRPDVRVYGVEAAAAASALASRRAGRV
                     VKIESAETIADGIAVKQVGDRTFPHNERWVDEIVAVDEEAIAGAMHLLLEQQKTVAEG
                     AGAAPLAAILGGLLPLRAADVAVMILSGGNVDVNLVSRVIDRGLVADGRLARLAVTVH
                     DRPGHLARLTELVAAEGANVLQVAHRRAFADISVRDVEIVLDLETRGREHMDAVMERL
                     RREGFTVTPDAPDGGGR"
     gene            2081..2740
                     /locus_tag="VFN38_03380"
     CDS             2081..2740
                     /locus_tag="VFN38_03380"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HET9010826.1"
                     /translation="MNVLLLGATGMVGQGVLRECLLDPRVRQVVVIGRSSTGQHHPKL
                     REIVIQNLFDLSAVLPDLPALDACFYCLGASAVGMSEEQYTRVTHDLTLSVAESLVRR
                     DPGMIFIYVSGTGTDSTERGRVMWARVKGRTENALLRLPFRAAYMFRPAVIVPMHGIR
                     SRTRLYRVLYTVLAPVLPLLKRLAPGWVTTTERVGQAMITVAAGGAPRRVLENPDINR
                     L"
     gene            2811..3233
                     /locus_tag="VFN38_03385"
     CDS             2811..3233
                     /locus_tag="VFN38_03385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010827.1"
                     /translation="MSVQPEIAAARDDVQRARDHIADTIAELEERITAPVQAVKRRLD
                     VGQMVREHPWAALAVAVSAGALVGGSGADQRAAAVAAEKARTGGAAALRAARQGAASA
                     REATKAAPSRSRVAVTAVVDALGAKLALSLVDALRAPR"
BASE COUNT          418 a         1116 c         1254 g          446 t
ORIGIN      
        1 cgcgtcgcgt cgaggatgag gaggatgtcg tgctggcgcg tgtactcgcg caccgcgcgc
       61 aggttcgcga ggctgatcgg ctgcccgccc gccatgttca ccgtggcggc caccgacacg
      121 tacggcacgc ggtcggcgcc gacccgctcc acgatggcgg cgagcttcgc caggtccacg
      181 ttccccttga acgggtgctc cgagcgggga tcgtgcgcct cgtcgatgat gatgtcgtgg
      241 aactgcccgc cggccagctc ctggtgcgcg cgcgtggtgg tgaagtacat gttgccgggc
      301 acgtggtcgc ccggctcgat gagcatccgc gagaggatgt gctccgcgcc gcgcccctgg
      361 tgggtgggga tgaggtgcgg gaagccgtag tggcgctgga ccgcctcctc gaggtggtag
      421 aagttgcgcg agccggcgta ggcctcgtcg cccagcatca tccccgccca ctggcggtcg
      481 gacatcgcgt tcgtccccga gtcggtgagg aggtcgatgt agacgtcgtc cgaccgcagg
      541 aggaaggtgt tgtggccggc gtcgcggatg gcgcgctctc gctcggcacg gctggtgatg
      601 cgcaggggct cgacgacctt gatcttccag ggctcggccc agctgtgttg acgcatggag
      661 gctcccgtcc gccgggcgga ccggtagggt gcatgatgac ggctgccata gtgtgccggg
      721 cgaaggcgtg gctcgctgtc gggaatgcac cggagggctg tcgggagaaa cggcatcgcc
      781 ggcgcggcgt cgtcgttccg ggggacgcgg ccggcggcat ttccccgacc gcggtacagg
      841 acctatcgtt gggaatgccc acccttgccg gcatccgcgc cgcgcgcgag cgcatccacg
      901 acggcatcgt cgccaccccg gtggtgccgg cgctcgcgct gcgcgaccgg ctcccctgcg
      961 cgctgcacct gaagctggag aacgcgcagc gcaccggctc gttcaaggac cggggcgcgc
     1021 tgaaccggct gctcgacctc ggggccgacg agcgccgccg cggcgtggtg accgccagcg
     1081 ccggcaatca cgcccaggcg gtggcctacc acggcgcccg gctcggggtg tcggtggagg
     1141 tcgtgatgcc cgagcagacc ccgctcatca aagtggccaa cacccggcgg ttcggcgccg
     1201 gcgttcgctt ccacggcgcc acgctgtccg aggcgatgac cgaggcgcgc cgcatcgagg
     1261 cggagcaggg ccgcgtgctg gtccacgcgt tcgacgacga gcgggtgatc gagggccagg
     1321 ggacgatcgg cctcgagctg ctggagcagc tgccggaggt cacggcggtc gtggtgccca
     1381 tcggcggcgg ggggctgatc gccggcatcg ccgcggccat ccgcgagcag cggcccgacg
     1441 tgcgcgtgta cggggtggag gcggccgccg cggcgtcggc cctcgcgtcg cgccgcgccg
     1501 gccgggtggt gaagatcgag tccgccgaga cgatcgccga cggcatcgcg gtgaagcagg
     1561 tgggcgaccg caccttcccc cacaacgagc gctgggtgga cgagatcgtg gcggtggacg
     1621 aggaggcgat cgccggcgcg atgcacctgc tgctggagca gcagaagacg gtggccgagg
     1681 gggccggggc ggcgccgctg gcggcgatcc tcggcggcct gctgccgctg cgcgcggcgg
     1741 acgtcgccgt gatgatcctc tccggcggca acgtggacgt gaacctcgtg tcgcgcgtca
     1801 tcgaccgcgg gctcgtggcc gacggacggc tcgcgcggct ggcggtgacg gtgcacgacc
     1861 gccccggcca cctggcgcgc ctcaccgagc tcgtggccgc cgagggcgcc aacgtgctcc
     1921 aggtggcgca ccgccgcgcc ttcgccgaca tctcggtgcg cgacgtggag atcgtgctcg
     1981 atctggagac ccgcggccgc gagcacatgg acgcggtgat ggagcggctg cgccgcgagg
     2041 gcttcaccgt gacgcccgac gcgcccgacg gggggggccg atgaacgtcc tcctgctcgg
     2101 cgccaccggc atggtggggc agggcgtcct gcgcgaatgc ctcctcgacc cgcgcgtccg
     2161 gcaggtcgtg gtcatcggcc ggagctccac cggccagcac cacccgaagc tccgcgagat
     2221 cgtgatccag aacctgttcg atctctccgc cgtgctgccc gacctccccg cgctcgacgc
     2281 ctgcttctac tgcctgggcg cctccgccgt ggggatgagc gaggagcagt acacccgggt
     2341 gacccacgac ctcaccctgt cggtggcgga gtcgctcgtg cgccgcgacc cggggatgat
     2401 cttcatctac gtctcgggca cgggcaccga cagcaccgag cgcggccggg tgatgtgggc
     2461 gcgcgtgaag gggcggacgg agaacgccct cctccggctc cccttccggg cggcgtacat
     2521 gttccggccc gccgtgatcg tcccgatgca cggcatccgg tcgcgcacga ggctgtaccg
     2581 ggtgctctac accgtgctgg cgccggtgct gccgctgctg aagcgcctcg cgccgggctg
     2641 ggtgacgacc accgagcggg tggggcaggc gatgatcacg gtggcggccg ggggcgcccc
     2701 ccggcgggtg ctggagaatc ccgacatcaa ccggctgtag cggcgagagc ccgaatcctg
     2761 caagagtggt cgggaccccg aagcctcgac ctctcgacag gagattcacc gtgtccgttc
     2821 agcccgagat cgccgcggcg cgcgacgacg tccagcgcgc gcgcgaccac atcgccgata
     2881 ccatcgcgga gctggaggag cgcatcaccg cgccggtgca ggcggtgaag cgccggctcg
     2941 acgtcggcca gatggtgcgg gagcatccgt gggcggcgct ggcggtggcc gtgagcgcgg
     3001 gcgccctggt ggggggatcg ggcgccgacc agcgcgccgc ggcggtcgcg gcggagaagg
     3061 ctcgtaccgg gggcgccgcc gccctgcgcg ccgccaggca gggcgccgca tcggcgcgcg
     3121 aggccacgaa ggcggcaccg tcgcggtcgc gcgtggcggt gacggccgtc gtcgacgcgc
     3181 tgggggcgaa gctcgcgctg agcctcgtcg acgcgctgcg ggcgccgcgc tgag
//
LOCUS       DASSYW010000220         2743 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_262992, whole genome shotgun sequence.
ACCESSION   DASSYW010000220 DASSYW010000000
VERSION     DASSYW010000220.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2743)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2743)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2743
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_262992"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            21..497
                     /locus_tag="VFN38_03390"
     CDS             21..497
                     /locus_tag="VFN38_03390"
                     /inference="COORDINATES: protein motif:HMM:NF014864.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010828.1"
                     /translation="MLKSVKARRQAVILDVIQRAPVRSQEQLRRSLRAAGFDVTQATL
                     SRDIRELQLVKGGADGAYQAPSRPAANGHGGAGMLQRALSEYLTKADQVQQMVLLRTG
                     PGQAQILGVAIDGARLSDVVGTLAGDDTILVITRGARQARALVKRFEAIASGHAIA"
     gene            537..1928
                     /gene="argH"
                     /locus_tag="VFN38_03395"
     CDS             537..1928
                     /gene="argH"
                     /locus_tag="VFN38_03395"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004056 - argininosuccinate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HET9010829.1"
                     /translation="MTTLWSGRFESAPDPAAFDFGVSFGFDRALFEDDVTGSVAWAEA
                     LGAAGVLSKDDVAAIVGALATILEEGRRNPDWVAGPDEDVHSFVERQLVERIGDAGRR
                     LHTGRSRNEQVSLDLRLYLRRKIPVLQRAVAEVVAALADRAAHAGEALMPSYTHLRKA
                     QPVLVAHFFLSHAAALRRDHARLAAAADEADACTLGSGAVAGTSYAVDTAALAKRLGF
                     SRVVANSMDASSDRDFVSAFLHAVALCMVHLSRLAEDLILFTGEEHAFFELADSSATG
                     SSMMPQKKNPDPLELVRGKTGRAIGRSTGWLVTMKGLPTGYNKDLQEDKEAVFDSEYT
                     LAVSLRAAHAVTSKLTFNAERSGRAASGLLLATDVADYLATHGMPFRRAHEVVGAMVR
                     SLLAQGRDFSDLSPEEWRAASDVFGPDAPEAATALASVKARKTPQSTHPGAVAAAVED
                     TRAWAAARLGVRS"
     gene            2001..>2743
                     /locus_tag="VFN38_03400"
     CDS             2001..>2743
                     /locus_tag="VFN38_03400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010830.1"
                     /translation="MQQRRPRLGDVLDDYCPRERRVTNHVVVAMIEDEVKQTRCSTCD
                     ADHEYKQARVPSPRRPKSVAALNDGAESFEGKPVLAAPARVAPEAEADADAALESDAP
                     LPSQPEPLTTPLAAAPDDAPVPIAASAAASAANDPGEERVAPEDEGPVHRPLMRAKLP
                     RPEGHVPERKEPEFTVRQQGGRGGGGREVDGNSVGYRPKGQGHRHGGGFGHGGGGGQS
                     RFGGQRHGSGQNQQRHGGGRGPDGGGQRGG"
BASE COUNT          434 a          936 c          978 g          395 t
ORIGIN      
        1 atcagtcaag actttgatgt atgctgaaaa gcgtgaaagc gcgccgtcag gcggtgattc
       61 tcgacgtaat ccagcgcgcg ccggtgcgca gccaggaaca gctccgccgc agtctgcgcg
      121 ccgccggctt cgacgtcacg caggccacgc tgtcgcgcga catccgcgag ctgcagctgg
      181 tgaagggggg cgccgacggg gcctaccagg cgccgtcccg gccggccgcc aacggccacg
      241 ggggcgcggg aatgctgcag agggccctgt cagaatatct gaccaaggcg gaccaggtgc
      301 agcagatggt gctgctccgc acgggcccgg gccaggccca gattctcggc gtcgccatcg
      361 acggcgcgcg cctgtcggac gtcgtcggca cgctggccgg ggacgatacg attctggtca
      421 tcacgcgcgg cgcgcgacag gccagggcgc tggtgaagcg cttcgaggcc atcgcctccg
      481 ggcacgctat cgcttagagc ggtgcctctc aagaaggtga atcaaacggt gcattcgtga
      541 cgacgctctg gtccggccgg ttcgagtcgg cccctgatcc cgctgccttc gacttcggcg
      601 tttcgttcgg gttcgatcgc gcgctcttcg aagacgacgt caccggcagc gtcgcgtggg
      661 ccgaggcgct cggcgccgcc ggcgtgctgt cgaaggacga cgtggcggcc atcgtcggcg
      721 cgctcgccac catcctcgaa gaagggcgcc gcaatcccga ttgggtggcc ggcccagacg
      781 aggacgtcca cagcttcgtg gagcggcagc tcgtggagcg gattggcgac gccggccggc
      841 gcctgcacac cgggcgttcg cgcaacgagc aggtgtcgct cgacctgcgg ctgtatctgc
      901 gccgcaagat tccggtgctg cagcgcgccg tggccgaagt ggtggcggcg ctcgcggatc
      961 gcgcggcgca cgccggcgag gcgttgatgc cgtcgtacac gcacctgcgc aaggcgcagc
     1021 cggtgctcgt ggcgcacttc tttctctcgc acgccgccgc gctgcgccgc gaccacgcgc
     1081 ggctggccgc ggccgccgac gaagccgacg cgtgcacgct cggttcgggt gcggtggcgg
     1141 gcacgagcta cgcggtggac accgcggcgc tcgcgaagcg gctcgggttc tcgcgcgtcg
     1201 tcgccaacag catggacgcg tcgtcggatc gcgatttcgt gtcggcgttc ctccacgcgg
     1261 tggcgctgtg catggtgcac ttgagccgtc tcgcggagga tctgattctc ttcaccggcg
     1321 aagagcacgc gttcttcgag ctggcggatt cgtcggccac cggcagcagc atgatgccgc
     1381 agaagaagaa tccggatccg cttgagctcg tgcgcggcaa gacgggccgc gccatcggcc
     1441 gctccaccgg atggctcgtc acgatgaaag ggctgcccac cggctacaac aaggacctgc
     1501 aggaagacaa agaggctgtg ttcgactcgg agtacacgct cgccgtctcg ctgcgcgcgg
     1561 cgcatgcggt gacgtcgaag ctcacgttca acgccgagcg atcgggccgc gccgcgtcgg
     1621 ggctgctgct cgccaccgac gttgccgact atctggccac gcacggcatg cccttccgcc
     1681 gcgcccacga agtggtgggt gccatggtgc gctcgctgct ggcgcagggg cgcgacttct
     1741 cggacctgtc gcccgaggaa tggcgcgccg ccagcgacgt cttcgggccg gatgcgccgg
     1801 aggccgccac cgcgctggcc tcggtaaagg ctaggaaaac cccgcaatcc acccatccgg
     1861 gcgccgtggc ggcggccgtg gaggacacgc gcgcctgggc cgccgcccgc ttgggagttc
     1921 ggagttgact ctgctagact tcggccatct tcggtccctt caaccatccc acctctgaag
     1981 ggacacgatc gggagaattg atgcagcaac gccggcctcg gctcggtgac gttctggacg
     2041 actactgtcc gcgggagcgc cgcgtcacca atcacgttgt cgtcgcgatg atcgaggacg
     2101 aagtcaagca gacgcgctgc tcgacgtgcg atgccgatca cgaatacaag caggcgcgcg
     2161 tgccgagccc gcgccgtccc aaatccgtgg cggccctgaa cgacggcgcc gagtcgttcg
     2221 agggaaaacc cgtactggcc gcgccggccc gcgtggcccc ggaagccgaa gccgacgccg
     2281 acgccgctct tgaatccgac gcaccactcc cttcacagcc ggaaccgttg accacaccgt
     2341 tggccgcagc gccagacgat gcgcccgttc cgatcgccgc cagcgcggcc gcatctgccg
     2401 cgaacgaccc cggcgaagag cgcgtggcgc ccgaagacga aggtcccgtg caccgcccgt
     2461 tgatgcgagc caaactgccg aggccagaag gacacgtgcc ggaacgcaag gagccggagt
     2521 tcaccgtccg gcagcagggc gggcgcggcg gcggtggccg tgaagtggac ggcaatagcg
     2581 tcggctaccg gccgaaggga caaggccacc ggcacggtgg cggattcggg cacggcggtg
     2641 gcggcgggca atcgcggttc ggcggtcagc ggcacgggtc gggccagaat caacaacggc
     2701 atggcggcgg ccgcggcccc gacggcggtg ggcagcgcgg cgg
//
LOCUS       DASSYW010000221         6568 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_428819, whole genome shotgun sequence.
ACCESSION   DASSYW010000221 DASSYW010000000
VERSION     DASSYW010000221.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 6568)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6568)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6568
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_428819"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..295
                     /locus_tag="VFN38_03405"
     CDS             <1..295
                     /locus_tag="VFN38_03405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010831.1"
                     /translation="ATARLARADGLMSETEPVYDREISKLRSIMKSRRSQLDPRTVAV
                     LEQSIAVIDSAIAQSRAALARDPASGFLATQLNHSLEKKVELLRTAALLPART"
     gene            310..1320
                     /locus_tag="VFN38_03410"
     CDS             310..1320
                     /locus_tag="VFN38_03410"
                     /inference="COORDINATES: protein motif:HMM:NF024743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4097 family beta strand repeat-containing
                     protein"
                     /protein_id="HET9010832.1"
                     /translation="MHRHIVVAAALLALAVPTPGSAQTTAEDRERERARIEREKQREE
                     ARRDREQARMERDREREQERRARDAAGSLDTTVAFDARGTLTVTCPQGAVIVTGSDRN
                     ELRVRARTEQGGIRFTSDGTRATLEPASGRGCNDGRFEVVVPAGVRVSARSWSGSVSV
                     KGVRGDVETRTQSADVEIRDAGRIDVESLSGDVSIHGVSGESMIHTVSGDIVLAGARG
                     DVEIETVSGDIDLADVVAKQVRTHTTSGDVEFAGQILPDGRYEYNTHSGEIRLVLPAN
                     VGAKLSVATFNGGIDSDFPITLQAGDHGNKRLNFTLGQGTARITAETFSGDITLTSKP
                     RR"
     gene            1346..2146
                     /locus_tag="VFN38_03415"
     CDS             1346..2146
                     /locus_tag="VFN38_03415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010833.1"
                     /translation="MPLLRRLSFTALLLAPAMLPAQERETDRSWTLSERVPAGQWIRV
                     RNLNGDLRVRASSTDRVEITATKSWRRGDPKDVRIETKRSADGSVLVCAFWTADATSS
                     ETGYQSNSRNDGWRRRDNDVAVDFEIRVPKGVKVGVWGVNGGVSVDGASGEVRAGTVN
                     GSVDAISMGGPVQASTVNGSVHAMMGRFDGDQDLTYSTVNGSVIAEFTGDVDADIDLS
                     TVNGRFQTDWPVTISGRIDPRRLKATLGKGGRRIRMSTVNGNVELRKR"
     gene            2346..3020
                     /locus_tag="VFN38_03420"
     CDS             2346..3020
                     /locus_tag="VFN38_03420"
                     /inference="COORDINATES: protein motif:HMM:NF013214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1 family protein"
                     /protein_id="HET9010834.1"
                     /translation="MGVSLPGTLVRSGADRATLVRRTYGLVFISVIITALGVAFCLST
                     PSLFQATAQHPFITMIAMFAPLWMAMQARREFPKNIVLTLIFTFIEGIFIAPFLAFAE
                     SRTPGIIGQAGLLTLSTFGALSLYAVVSKRDFSAWGSFFMVGLWVLIVTSLISFFFPS
                     ALGSLWIAAGTVLVFSGLLVFDTWRIVRSGQYGPDDYVPAAVNIYLDLLNLFLALTRL
                     LGGGRR"
     gene            3034..3774
                     /locus_tag="VFN38_03425"
     CDS             3034..3774
                     /locus_tag="VFN38_03425"
                     /EC_number="3.5.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019213 - deacetylase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PIG-L family deacetylase"
                     /protein_id="HET9010835.1"
                     /translation="MRRLTALFAHPDDETFAIGGTLARYAGDGVRCSLYCATDGDAGR
                     SSGIPVSSRAELAALRRDELRAACDVLGIAALECGGHPDGALAATDPDVVMGEMVRLI
                     RRERPSVVLTFGPEGAPTAHRDHRAISRLATAATLLADTTTAYPEQLADGLAPHRADR
                     LCYVTWSPPAPGSEPGTEGQPIDIRVSVQAWLPRKALAFEAHRSQHQHRARFEQLALL
                     ESESYFVAIGVPAPRGAEDLFAGLDPST"
     gene            complement(3837..4124)
                     /locus_tag="VFN38_03430"
     CDS             complement(3837..4124)
                     /locus_tag="VFN38_03430"
                     /EC_number="4.2.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008124 -
                     4-alpha-hydroxytetrahydrobiopterin dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006729 - tetrahydrobiopterin biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4a-hydroxytetrahydrobiopterin dehydratase"
                     /protein_id="HET9010836.1"
                     /translation="MPPRLSDLEIQRALGSLPGWARRGDVLTKTFTFKRFSDGIDFVQ
                     RVARAADKVNHHPDIDIRYTKIVCALSTHDAGGITENDLSLASTIESLAEG"
     gene            4215..4694
                     /locus_tag="VFN38_03435"
     CDS             4215..4694
                     /locus_tag="VFN38_03435"
                     /EC_number="2.1.1.100"
                     /EC_number="2.1.1.334"
                     /inference="COORDINATES: protein motif:HMM:NF016107.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
                     /protein_id="HET9010837.1"
                     /translation="MTKQSFTQGPGVRFPPPVLFVGALVAAWLVARLVRPMPLAADGR
                     PLATAGTVLIVLGVALAAWGMITFRRARTAIVPMHPASRIVTNGPYRFTRNPMYTGLT
                     LVYLGVSLYMNSVWPLLALPIVLALLIRLVVRREEAYLRSAFGEEYLAYQSRVRRWL"
     gene            4691..5284
                     /locus_tag="VFN38_03440"
     CDS             4691..5284
                     /locus_tag="VFN38_03440"
                     /inference="COORDINATES: protein motif:HMM:NF013250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HET9010838.1"
                     /translation="MTSPPWTGAQRRGYRFSLALTLFRLALAPALVALARAGAPGIVL
                     ALGLVAGFASDVLDGVVARRAGVVTPLLRRLDSSVDTVFYLGVAYATWHRHPDALRAL
                     GIPILIVLGAEALNYLAAYARFRREASYHARSAKVWGLLLFIALFLLLATGRATLLPV
                     ALAAGVLAQAETLAITLVLPHWRHDVPSVWNARHRDA"
     gene            complement(5554..>6568)
                     /locus_tag="VFN38_03445"
     CDS             complement(5554..>6568)
                     /locus_tag="VFN38_03445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010839.1"
                     /translation="GSGFSASDIAGARGYAQTMKALQYIRLIEMRDTIGVPIALGKGE
                     LDPIRCKPAVLAYISSLLDSAATDLGAAGSSFAFVLPGGFSSNGSFNTPAGFLKFNRG
                     LKAKNEVYRGFVNYAKSGTVDAAALNAALTALDASFANPAGNFRDGVYHIYSTASGDL
                     LNQNFDASVHRANPKVLSEAEAGDARLAKIRKDPSQNLSTEGVSSDILFTIFSGPTSA
                     IPLLINEELVLVRAEALWGLNRDAEALALVNTVRSRSGGFAVPKVAANFATRLDLLRE
                     ILKQKRYSLLYESPDRAIDYRMFGLWTELGPERTATNFGPMVVPIPEAEANARGNTLT
                     CAP"
BASE COUNT          982 a         2302 c         2254 g         1030 t
ORIGIN      
        1 ggcgacagcg cgtctcgcgc gggcggacgg tctgatgagc gagaccgagc cggtgtacga
       61 tcgcgagatc tcgaagctcc gctccatcat gaagtcgcgc cgctcgcagc tcgatcccag
      121 gacggtcgcg gtgctcgagc agagcatcgc cgtgatcgac tcggcgatcg cgcagagccg
      181 cgcggcgctc gcccgggacc cggcgagcgg cttcctcgcc acgcaactca accactcgct
      241 cgagaagaaa gtcgagctgc tgcggacggc ggcgctgctg cccgcgcgca cctgatgagg
      301 acatcgacca tgcaccgcca tatcgtcgtc gccgccgccc tgctcgcctt ggcggttccc
      361 acgccgggct cggcgcagac cacggccgaa gaccgcgagc gcgagcgcgc gcgcatcgag
      421 cgcgagaagc agcgcgagga ggcgcggcgc gaccgggagc aggcgcgaat ggagcgcgac
      481 cgggagcgtg agcaggagcg gcgcgcgcgc gacgccgcgg gctcgctcga caccaccgtc
      541 gcgttcgacg cccgggggac gctcaccgtg acctgcccgc agggcgccgt catcgtcacc
      601 ggctccgacc gcaacgagct gcgggtgagg gcgcgcacgg agcagggcgg catccgcttc
      661 accagcgacg gcacgcgcgc cacgctcgag ccggcgtcgg gccgcggctg caacgacggg
      721 cgcttcgagg tggtcgtgcc ggcgggcgtc cgggtgagcg cgcggagctg gagcggcagc
      781 gtgagcgtga agggggtgcg tggcgacgtc gagacccgca cccagagcgc cgacgtggag
      841 atccgcgacg ccggccggat cgacgtggag tcgctctcgg gcgacgtgtc gatccacggg
      901 gtgagcggcg agtcgatgat ccacaccgtc agcggcgaca tcgtgctcgc cggcgcgcgc
      961 ggcgacgtgg agatcgagac agtgagcggc gacatcgacc tcgcggacgt ggtggcgaag
     1021 caggtccgca cgcacaccac gagcggcgac gtggagttcg ccggccagat cctgcccgac
     1081 ggacggtacg agtacaacac gcactccggc gagatccggc tcgtgctccc cgccaacgtg
     1141 ggcgcgaagc tcagcgtggc caccttcaac ggcggcatcg acagcgactt cccgatcacc
     1201 ctgcaggccg gcgaccacgg gaacaagcgc ctgaacttca ccctgggcca gggcaccgcc
     1261 cgcatcaccg ccgagacgtt cagcggcgac atcaccctca cgtccaagcc gcgccgctag
     1321 gcgcgccgca cccatggaga tcgcgatgcc gctcctccgc cgcctgtcct tcaccgcact
     1381 tctgctcgcg ccggccatgc tgccggcgca ggagcgtgag accgatcgca gctggaccct
     1441 gagcgagcgc gtccccgccg gccagtggat ccgcgtgcgc aacctgaacg gcgacctccg
     1501 ggtccgcgcc tcgagcaccg acagggtgga gatcacggcc accaagagct ggcgccgcgg
     1561 cgacccgaag gacgtccgca tcgagacgaa gcgctcggcc gacggcagcg tcctcgtctg
     1621 cgccttctgg accgcggacg cgaccagcag cgagacgggc taccagtcga actcgcgcaa
     1681 cgacggctgg cggcgccgcg acaacgacgt cgccgtggac ttcgagatcc gcgtgccgaa
     1741 gggggtgaag gtgggggtct ggggggtcaa cggcggggtc agcgtggacg gcgcgtcggg
     1801 cgaggtgcgc gccggcacgg tgaacggcag cgtggacgcc atcagcatgg gcgggccggt
     1861 ccaggccagc acggtgaacg gcagcgtgca tgccatgatg ggccgcttcg acggcgacca
     1921 ggacctgacc tacagcacgg tgaacggtag cgtgatcgcg gagttcaccg gtgacgtgga
     1981 cgccgacatc gacctgagca cggtgaacgg ccgcttccag accgactggc cggtgacgat
     2041 ctccggccgc atcgacccgc gccggctgaa ggcgacgctg ggcaaggggg gccggcggat
     2101 ccggatgagc accgtcaacg ggaacgtgga gttgagaaag cggtagcggg aggaacggga
     2161 tgacgggatg acgggatgat gggatgacgg gatgacggga tgaccgaagg cacaccggac
     2221 gagcgtcggt gtgccttttc cgtcctcctg tcttccggtc atcccgtctt cccagcgtta
     2281 cgacttggct ccatttcccg tcccaagggt atatttcgca taccccctcc aacggagaac
     2341 caccaatggg tgtctcgctt cccgggaccc tcgttcgttc cggtgcggac cgcgccacgc
     2401 tggtgcgtcg gacgtacggt ctcgtcttca tcagcgtcat catcacggcg ctcggcgtcg
     2461 ccttctgcct gagcacgccg agcctcttcc aggcgacggc gcagcatccg ttcatcacga
     2521 tgatcgcgat gttcgccccg ctctggatgg cgatgcaggc gcgccgcgag ttcccgaaga
     2581 acatcgtcct caccctcatc ttcacgttca tcgaggggat cttcatcgcg cccttcctgg
     2641 cgttcgccga gtcgcgcacg ccggggatca tcggccaagc cgggctgctc acgctgtcca
     2701 cgttcggcgc gctctcgctg tacgccgtgg tgagcaagcg cgacttcagc gcgtggggca
     2761 gcttcttcat ggtcgggctg tgggtgctga tcgtgacgtc gctgatcagc ttcttcttcc
     2821 ccagcgcgct cgggtcgctc tggatcgccg ccggcacggt gctcgtgttc agcgggctcc
     2881 tcgtgttcga cacctggcgc atcgtgcgct ccggccagta cggcccggac gactacgtgc
     2941 cggccgcggt gaacatctac ctcgacctgc tcaacctctt cctcgccctc acgcgactgc
     3001 tcggcggcgg ccgccgctga ccgacgccgg gtgatgcggc ggctcaccgc gctcttcgcc
     3061 caccccgacg acgagacgtt cgcgatcggg ggaacgctgg cccgctacgc gggcgatggg
     3121 gtccggtgct cgctctactg cgccaccgac ggggatgccg gacgatcgtc cggcatcccc
     3181 gtgtcgtctc gggccgagtt ggcggcgctg cgccgcgacg agctgcgcgc cgcctgcgac
     3241 gtgctgggca tcgccgctct ggagtgcggc ggccaccccg acggcgcgct cgcggcaacg
     3301 gacccggacg tggtgatggg cgagatggtg cggctcatca ggcgggaacg tccgtccgtc
     3361 gtgctcacct tcgggccgga gggtgcgccc accgcccacc gcgaccaccg cgccatctcg
     3421 cgactcgcca ccgccgccac gctcctcgcc gataccacga ccgcctatcc cgagcagctc
     3481 gccgacggcc tcgcgccgca tcgcgccgac cggctgtgct acgtcacgtg gtccccgccg
     3541 gcgcccggat ccgagccggg caccgaaggg caaccgatcg acatccgcgt gagcgtacag
     3601 gcgtggctgc cgcggaaggc gctggcgttc gaggcgcatc gcagccagca tcagcaccgg
     3661 gcgcgcttcg agcagctcgc gctcctggag tcggaatcgt acttcgtggc gatcggcgtg
     3721 ccggcgcccc gcggagcgga agacctcttc gccgggctgg acccgtcaac ctgagcgcag
     3781 cgaaggatct gcttcgttcg gacgtgcagg tccttcgctt tcggctcagg acgacctcaa
     3841 ccctcggcga gcgactcgat cgtgctggcg aggctgaggt cgttctcggt gatcccccca
     3901 gcgtcgtgcg tgctcagcgc gcagacgatc ttcgtgtagc ggatgtcgat gtcggggtgg
     3961 tggttcacct tgtccgccgc gcgcgcgacg cgctgcacga agtcgatccc gtcggagaag
     4021 cgcttgaagg tgaacgtctt cgtcaggacg tcgccgcgtc gggcccagcc tgggagcgag
     4081 ccgagggcgc gctggatctc gaggtcggag aggcgtggag gcatgggccg gtctggtggg
     4141 agaaggggcg cagcggtaga tgatatcacc ggagcagcca acgttcaaag gccattcatc
     4201 catcggtgag attcgtgacg aagcagtcgt tcacgcaggg cccgggcgtg cgctttccgc
     4261 cgcccgtcct gttcgtcggc gcgctggtgg ccgcctggct ggtcgcgcgg ctcgtccgcc
     4321 cgatgccgct ggcggccgac gggaggccgc tggcgaccgc cggcacggtg ttgatcgtgc
     4381 tcggggtcgc gctggcggcg tgggggatga tcaccttccg ccgggcgcgc accgccatcg
     4441 tcccgatgca cccggccagc cgtatcgtca ccaatgggcc gtaccgcttc acccgcaatc
     4501 ccatgtacac cgggctgacg ctcgtctacc tcggcgtgtc cctctacatg aattccgtct
     4561 ggcccctgct tgcgctgccg atcgtgctcg cgctgctcat ccggctcgtc gtgcgacgcg
     4621 aggaagccta cctccgaagc gcctttggcg aggagtacct ggcataccag tcacgcgtgc
     4681 ggcgctggct gtgacgagtc cgccgtggac cggcgcacaa cggcgcggct accggttctc
     4741 gctcgccctc actctgttcc gcctcgcgct cgctccggcg ctggtggccc tcgcacgtgc
     4801 cggcgcgccg ggcatcgtgc tggcgctggg cttggtcgcc ggcttcgctt ccgacgtgct
     4861 cgatggcgtg gtggcgcggc gggccggcgt cgtgacgccg ctgctccggc gactcgacag
     4921 cagcgtggat accgtcttct acctcggtgt cgcctatgcg acctggcatc gccatcccga
     4981 tgcgcttcgc gcactcggca ttcccatcct gatcgtgctc ggcgccgagg cgctcaacta
     5041 cctcgcggca tacgcacgct ttcgtcgcga ggcgagctat cacgcccgca gcgccaaggt
     5101 atgggggctg ctgctcttca tcgccctctt cctgctgctc gccacggggc gcgcgacact
     5161 gctgccagtc gcactggcgg ccggagtgct ggcgcaggcc gagaccctcg ccatcacgct
     5221 cgtgctcccg cactggcggc acgatgtgcc gagcgtgtgg aacgcccggc accgtgacgc
     5281 gtagcgaagc ggagactgcc ttgcaccgcc gaggacgcag agggacggag gactgcaact
     5341 gccgcgaaca aaccacagag gaaaacgagg tcgtagcgaa ctgccggcaa gaaccaagag
     5401 ttggatctgc tccttggtgc tccctgtgac ctccgcgccc tctgtggttt gttcaagcct
     5461 ttcctcttcg cggcgagacg tcccgagcgg ccgtcctccg cgtccctctg cgtccccggc
     5521 ggtgaagcag gcagttgtcc tccgtctacg agctcacggc gcacacgtca acgtgttccc
     5581 gcgtgcattc gcctcggcct ccggaatcgg gaccaccatc ggaccgaagt tcgtcgccgt
     5641 ccgctccggg cccagctccg tccacagccc gaacatccgg tagtcgatcg cccggtcggg
     5701 gctctcgtac aacagcgagt agcgcttctg cttcaggatc tcccgcagca ggtcgagccg
     5761 cgtggcgaag ttcgccgcca ccttgggcac cgcgaacccg cccgaccgcg accgtaccgt
     5821 gttcacgagc gccagcgctt cggcgtcgcg gttgagtccc cacagtgcct cggcgcgcac
     5881 gagcaccagc tcctcgttga tcagcagcgg aatggctgac gtggggccgc tgaagatcgt
     5941 gaacaggatg tcggacgaca ccccttcggt ggagaggttc tgcgacggat ccttgcggat
     6001 cttcgccagc cgcgcgtcgc cggcctccgc ctcgctcagc accttcgggt tcgcgcggtg
     6061 cacggacgcg tcgaagttct ggttgagcag atcgcccgac gccgtgctgt agatgtggta
     6121 cacgccgtcg cggaagttgc ccgccgggtt ggcgaacgac gcgtcgagcg cggtgagggc
     6181 ggcgttcagc gcggccgcgt cgaccgtgcc ggacttcgcg tagttgacga agccgcggta
     6241 cacctcgttc ttcgccttca gcccccgatt gaacttgaga aatccggccg gcgtgttgaa
     6301 cgacccgttc gagctgaagc ctccgggcag cacgaaggcg aacgatgacc ccgctgcacc
     6361 gagatcagtg gccgccgagt cgagcagcga cgagatgtac gccagcaccg ccggcttgca
     6421 gcggatcgga tcgagctcgc ctttccccag cgcgatcggc acgccgatgg tgtcgcgcat
     6481 ctcgatcagc cggatgtact ggagcgcctt catcgtttgc gcgtaaccgc gcgcaccggc
     6541 gatgtccgag gcagagaacc ccgagccg
//
LOCUS       DASSYW010000222         4269 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_7256, whole genome shotgun sequence.
ACCESSION   DASSYW010000222 DASSYW010000000
VERSION     DASSYW010000222.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4269)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4269)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4269
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_7256"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2663)
                     /locus_tag="VFN38_03450"
     CDS             complement(<1..2663)
                     /locus_tag="VFN38_03450"
                     /inference="COORDINATES: protein motif:HMM:NF044287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BTAD domain-containing putative transcriptional
                     regulator"
                     /protein_id="HET9010840.1"
                     /translation="MSLPDSPSDAAAELPVHLTRFIGREHEIDDLVRLVGETRLLTLT
                     GAGGSGKTRLARETALRVAGDFCHVTWVDLAPLGETAVLAQEIATALHIPERTGFTAQ
                     QLLAAAIGGDHLLVVLDNCEHVVDACAELVDALLRACPRLVILATSREALGVASETAW
                     LVPPLASAEAVQLFVERARAALPTFAHTTAVSPAVEEICRRLDGIPLAIELAAARVRV
                     LTPEQIACRLGDAFRLLSAGSRTSLPRHRTLRATMEWSFGLLASREQVLLRRLAVFAG
                     SFTLDAAESVAAGVPLEPEDVLDGVAALVDKSLLGMEAGSGEARYRMLETVRQYGIER
                     LTEAGELDAMEHGYAEYYLAIVEAAAPNLVGGSNAPDLLARLVAEHDNLRATVTWAVS
                     DPSRAALALRFVGASYWYWYAMGLFREARQLVDRALALDAPAEPLFRGRALISSALTA
                     LAQGDYVLACAHFEAALPLIRSAGDRRAEGAAIAKYGAARLLGGDVAGAIIVLDEALV
                     FTHGGPPEDIAAIFARFWRAWAAYVQGDHDYACRLLRDNESVARAHDLPTTLAHGLAT
                     LARVEVARGNVEDGCALVMEALELEVSINDAWGIALALDVVAVVAARRGRSDVAARLL
                     AGIAAHRERLAVALPGLAPTERKALMEELREALGDGFDSSYAEGAILSTGEVVQLALS
                     EAARHTTEHRVAPRAEPQPPATHERRLRVLALGPLQVFVGDRLLDSGAWGSARPRELL
                     VYLLLHPEGRTKEQVGLAFWPDASVAQLRNNFHVTLHRLRKALGAGEWITLEADRYRV
                     APEAIESFDVVEFEREVLAARLAAKRQQEGAASRLEAALARYRGDLLDGEPVGDWHLE
                     LRDRLQRLYVDSLMELGARHAAEAREQKAAEA"
     gene            complement(2741..3244)
                     /locus_tag="VFN38_03455"
     CDS             complement(2741..3244)
                     /locus_tag="VFN38_03455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HET9010841.1"
                     /translation="MSHTTGTFQAGGGWAEVRADGQVLRYRRSGSGRSVLLLCVGAAC
                     ESPWSALVAALDADFRVLVPVLPPAAHLVRGLTAFLDGLGTTRVAVVATGDLCGAALE
                     LALQDPDRVARAVLVPDAPADHAGVDATLRATAHDLAVPLSVLPRGTPTDELLVRIGA
                     FLAHSWE"
     gene            3409..>4269
                     /locus_tag="VFN38_03460"
     CDS             3409..>4269
                     /locus_tag="VFN38_03460"
                     /inference="COORDINATES: protein motif:HMM:NF037749.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5602 domain-containing protein"
                     /protein_id="HET9010842.1"
                     /translation="MNRTRLFLAVSAVSAALAFAACNEPTRPRAQLPIIRSGMSASTI
                     GNDVAAQHTTSQRQYGTPIQVGNGIVRTYVDLAKDLWGTPLEIGVAMSERAMDGLPAP
                     MAMSAEEMKKSGHVGMNMYLLDLPTKNPTPYKFVQFDWNPAGHEPAGVYDLPHFDFHF
                     YTVDKSVRASILPSDPDYAQKAASYPAPEFRAPFYIDAATAAGAPAAAVTVPQMGLHW
                     LDIRSPELQGMAGNPAGFKPFTKTFIYGSWDGRFIFDEPMITRAYIMAKRDATDPAVR
                     DEIIPVSVAPK"
BASE COUNT          650 a         1593 c         1485 g          541 t
ORIGIN      
        1 gcctcggcgg ccttctgctc gcgcgcttcc gcggcgtggc gcgcaccgag ctccatcagc
       61 gagtcgacgt acagccgctg cagtcggtcg cgaagctcca ggtgccagtc gcccaccggc
      121 tcgccgtcga gcaggtcgcc gcgataccgc gccagcgcgg cctccagccg gctggcggcg
      181 ccctcctgct gccgcttcgc ggccaggcgt gcggcgagca cctcgcgctc gaactccacg
      241 acgtcgaacg actcgatcgc ctccggcgcg acgcgatagc gatcagcctc gagcgtgatc
      301 cactcgccgg cgccgagcgc cttgcgcagg cggtgcagcg tgacgtggaa gttgttgcgc
      361 agctgtgcga cgctcgcgtc gggccagaag gcgagcccga cctgctcctt ggtccggcct
      421 tccggatgca ggagcagata gacgaggagc tcacgtggcc gtgcggagcc ccacgcgccg
      481 gagtcaagca gtcggtcgcc aacgaagacc tgaagcgggc cgagcgcgag cacgcgcagt
      541 ctccgttcgt gcgtcgcagg cggctgcggc tccgcccgcg gcgcgacgcg atgctccgtc
      601 gtgtgccgcg ccgcttccga caacgcgagc tggaccacct cccccgtcga gaggatggca
      661 ccctccgcgt acgacgagtc gaagccatcg ccgagcgctt cgcgaagctc ttccatcagc
      721 gccttccgct cggtgggcgc gagccccggg agcgcgaccg cgagacgctc gcgatgcgcc
      781 gcgatgcccg ccagcagccg cgctgcgacg tcgctccgcc ctcggcgcgc ggcgacgacg
      841 gcgaccacgt ccaacgcgag cgcgatgccc caggcgtcgt tgatcgagac ctcgagctcg
      901 agcgcttcca tcacgagcgc gcaaccgtct tccacgttgc cgcgcgccac ctcgacgcgc
      961 gccagcgtgg ccaggccgtg ggccagcgtc gtggggagat cgtgcgcgcg cgccaccgac
     1021 tcgttgtcac gcagcaggcg gcaggcgtag tcgtgatccc cctggacgta cgccgcccag
     1081 gcgcgccaga agcgcgcgaa gatcgccgcg atgtcctccg gcggcccgcc gtgcgtgaac
     1141 acgagagcct cgtcgagcac gatgatcgcg ccggcgacgt cgccgccgag caggcgcgcg
     1201 gcgccgtact tggcgatcgc cgccccctcg gcgcggcggt cgcccgcgga ccggatgagc
     1261 gggagcgccg cctcgaagtg cgcgcaggcg aggacgtagt cgccctgcgc gagcgccgtg
     1321 agcgcgctcg agatgagcgc gcgaccgcgg aagagcggct ccgccggcgc gtcgagcgcg
     1381 agcgcgcgat ccacgagctg ccgcgcttcg cggaacagcc ccatggcgta ccagtaccag
     1441 tacgacgctc ccacgaagcg cagcgccagc gccgcgcgcg acgggtcgct caccgcccag
     1501 gtcaccgtcg cgcgcaggtt gtcgtgctcc gccaccagcc gcgcgaggag atccggggcg
     1561 ttggacccgc ccacgaggtt gggtgccgcc gcctcgacga tggcgagata atactccgcg
     1621 tacccgtgct ccatcgcgtc gagctcgccc gcctccgtca ggcgctcgat cccgtactga
     1681 cgcaccgtct ccagcatgcg gtagcgcgcc tcgccgctcc ccgcctccat cccgagcagc
     1741 gacttgtcca ccagcgccgc cacgccatcc aggacgtctt ccggctcgag gggcacgccg
     1801 gcggcgaccg attcggcggc gtcgagcgtg aagctgccgg cgaacacggc gagccggcgc
     1861 agcagcacct gctcgcgcga ggcgagcagt ccgaagctcc actccatggt cgcccgcaac
     1921 gttcgatgtc gcggcagcga cgtccggctt cccgcggaca gcaggcggaa cgcatcgccg
     1981 agacgacagg cgatctgctc gggagtgagc acgcgaaccc gcgcggccgc cagctcgatg
     2041 gccagcggga tgccgtcgag ccgacggcag atctcctcca ccgccggcga gacggcggtg
     2101 gtgtgcgcga aggtcgggag cgcggctcgc gcccgctcca cgaacagctg caccgcctcg
     2161 gcgctcgcga gcggaggaac cagccacgcc gtttcgctgg ccacaccgag cgcctcgcgg
     2221 ctcgtcgcga gtatcaccag ccggggacag gcgcgcagca gcgcgtccac gagctcggcg
     2281 catgcgtcca ccacgtgctc gcagttgtcc agcaccacca gcaggtggtc gccgccgatc
     2341 gccgccgcga gcagctgctg ggcggtgaag cccgtgcgct cggggatgtg cagcgccgtc
     2401 gcgatctcct gcgccagcac cgctgtctcg ccgagcggcg ccaggtccac ccacgtgacg
     2461 tggcagaagt cgccggcgac gcgcagcgcc gtctcgcggg cgagtcgggt ctttccgctg
     2521 ccgccggcgc cggtgagggt gaggagccgc gtctcgccca cgaggcggac gagatcgtcg
     2581 atctcgtgct cccgcccgat gaatcgggtg aggtgtaccg gcagctcggc ggcggcgtcg
     2641 ctcggcgagt cggggaggct catcggggca gggaagagcg gagggtggcg cccggcacga
     2701 tagaatacga tccggccgtc ggccgatcaa gccgtccccg tcactcccag gagtgcgcga
     2761 ggaacgcgcc gatgcgcacg agcagctcat cggtcggcgt gcctcggggc agcaccgaaa
     2821 ggggcacggc caggtcgtgc gccgtcgccc ggagcgtggc gtccacgccg gcgtgatcgg
     2881 cgggggcatc ggggacgagc acggcgcgtg cgacccgatc cggatcctgg agggccagct
     2941 cgagcgcggc gccgcagaga tcacccgtcg caacgacggc gacccgcgtc gtgccgaggc
     3001 cgtcgaggaa cgccgtcagc ccgcgcacga ggtgcgcggc gggggggagc acgggaacga
     3061 gcacgcgaaa gtcggcgtcc agcgccgcga cgagcgcgga ccacgggctc tcgcacgccg
     3121 cgccgacgca gaggagcagc accgagcgcc cgctgcccga ccgccggtac cgcagcacct
     3181 gaccgtccgc gcgcacttcg gcccagcctc cgcccgcctg gaacgttccg gtcgtgtgcg
     3241 acatggcgcc aagtctggac gaaggcgctt actccccgct tacagcggcg ggcattccgc
     3301 gccggggacg ccgtaagcag gcgtccccgc cggcgttatg cggacggtaa tcggtggcgt
     3361 cgacattccc cgcgtccact cgaccccact tcaccggagg accgatccat gaaccgcacc
     3421 cgcctctttc tcgccgtgag cgccgtcagc gcggcgctcg ccttcgccgc ctgcaacgag
     3481 ccgacgcgcc cgcgtgccca gctccccatc atccgctcgg ggatgagcgc cagcaccatc
     3541 ggcaacgacg tcgccgcgca gcacaccacc tcgcagcggc agtacggtac cccgatccag
     3601 gtcgggaacg gcatcgtgcg cacgtacgtc gacctggcca aggacctgtg gggcacgccg
     3661 ctcgagatcg gcgtggcgat gagcgagcgc gccatggacg gactgcccgc gccgatggcg
     3721 atgagcgccg aggagatgaa gaagagcggg cacgtcggga tgaacatgta cctgctcgac
     3781 ctgccgacga agaatcccac accgtacaag ttcgtgcagt tcgactggaa ccccgccggt
     3841 cacgagccgg ccggcgtgta cgacctgccg cacttcgact tccacttcta tacggtcgac
     3901 aagtcagtgc gcgcctcgat cctgccctcc gatccggact acgcgcagaa ggcggcgagc
     3961 tatccggctc ccgagttccg cgcgcccttc tacatcgacg ccgccacggc cgccggcgcg
     4021 ccggccgccg ccgtgacggt gccgcagatg gggctccact ggctcgacat ccgctctccc
     4081 gagctgcagg ggatggcggg caacccggcc ggcttcaagc cgttcacgaa gacgttcatc
     4141 tacgggtcgt gggacggacg cttcatcttc gacgagccga tgatcacgcg cgcctacatc
     4201 atggcgaagc gcgacgccac cgatccggcg gtgcgagacg agatcatccc ggtgtcggtg
     4261 gcgccgaag
//
LOCUS       DASSYW010000223         2429 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_166226, whole genome shotgun sequence.
ACCESSION   DASSYW010000223 DASSYW010000000
VERSION     DASSYW010000223.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2429)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2429)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2429
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_166226"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..622
                     /locus_tag="VFN38_03465"
     CDS             <1..622
                     /locus_tag="VFN38_03465"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HET9010843.1"
                     /translation="EEDMEVVGECADGTQAVDSVRRLKPDVVLMDIRMPEMDGIEATR
                     RIAGEAGEPVRVLMLTTFDLDEYVYDALRAGASGFLLKDVPAEQLVEGIRVVARGEAL
                     LAPTVTKRLIEEFSRSGPVRAEQPPELEQLTPRELEVLGLLARGRSNAEIAGELVVGE
                     GTVKTHVARVLMKLGVRDRVQAVVLAYESGVVAPGATDPSVNAQPE"
     gene            complement(559..1098)
                     /locus_tag="VFN38_03470"
     CDS             complement(559..1098)
                     /locus_tag="VFN38_03470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010844.1"
                     /translation="MVLRDGVLDGVAMVVAGAAELGGAVRERAAALGASVVSRDVDPA
                     GEETPFEGAADVLVFDGSETRGVQAALDGAWLTVRPVARAAMIDHGGGRIVLIAPRPG
                     SAEAEGARAGLENMARTLSVEWARFHVRPVTILPGDVTDPGEVAELVAYLASPAGEYY
                     SGCAFTLGSVAPGATTPDS"
     gene            complement(1143..1316)
                     /locus_tag="VFN38_03475"
     CDS             complement(1143..1316)
                     /locus_tag="VFN38_03475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010845.1"
                     /translation="MSRCRLVDGRTPAEVRKRLGPPESVRRSGGSLTWEYGDALTIAF
                     DEEERVGSVITDR"
     gene            complement(1399..2205)
                     /locus_tag="VFN38_03480"
     CDS             complement(1399..2205)
                     /locus_tag="VFN38_03480"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HET9010846.1"
                     /translation="MEEQERPKDLAPMKAQVYKDPRPVEYFARFHERSRTRDPDWVYE
                     AVRIATTLYAWIFFRTRGIAAEKVRGDGAVILAPNHFSFMDHFFLGVSIRRKVRFMAK
                     SQLFTRPLQWIYTHGGVFPVRRGYADEDAFITATGILARGGTVAMYCEGGRSRTGALS
                     DKPKRGIGRLALMSGAPIVPVAIHGSSKVRNWKRLQFPKVTVRYGDPIIWDRVEDPTR
                     EQQQAVADQIFAEIRALYAELEADGRAGVVKRVRELRRAERAGRKKAAPA"
     gene            complement(2241..>2429)
                     /locus_tag="VFN38_03485"
     CDS             complement(2241..>2429)
                     /locus_tag="VFN38_03485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010847.1"
                     /translation="AETTAFGAALLAGVGADLLTLSQVAEIGDTRATYEPRLSEDERE
                     SLLDGWHRALERSRGWAR"
BASE COUNT          329 a          902 c          870 g          328 t
ORIGIN      
        1 ggaggaagac atggaggtgg tcggcgagtg cgccgacggc acccaggccg tcgacagcgt
       61 gcgccggctg aagcccgacg tggtgctgat ggacatccgc atgcccgaga tggacggcat
      121 cgaggccacg cggcgaatcg ccggtgaggc cggcgagccc gtccgcgtcc tcatgctgac
      181 cacgttcgac ctcgacgagt atgtctacga cgccctgcgg gccggcgcga gcggcttcct
      241 gctgaaggac gtgcccgcgg agcagctcgt cgagggcatc cgcgtggtgg cgcgcggtga
      301 ggcgctcctg gcgcccacgg tcacgaagcg cctgatcgag gagttctccc gctccggccc
      361 cgtgcgcgcc gagcagccgc ccgagctcga gcagctcacg ccgcgcgagc tcgaggtcct
      421 cggactgctc gcccgcggcc gctcgaatgc ggagatcgcg ggcgagctcg tggtcggcga
      481 gggcaccgtc aagacccacg tcgcgcgcgt gctgatgaag ctcggcgtac gcgaccgcgt
      541 tcaggcggtg gtgctggcct acgagtcggg cgtggtcgcg cccggcgcga ccgacccgag
      601 cgtgaacgcg cagcccgagt agtactcgcc ggcgggcgag gccaggtacg cgaccagctc
      661 ggccacctca cccgggtcgg tcacgtcccc ggggaggatc gtcaccggcc ggacgtggaa
      721 gcgcgcccac tcgacgctga gcgtgcgcgc catgttctcc aggccggcgc gcgcgccctc
      781 cgcctccgcg ctcccgggcc gcggggcgat cagcacgatc cgcccgccgc cgtggtcgat
      841 catggccgca cgcgcgaccg gccggaccgt cagccaggcg ccgtcgagcg ccgcttgcac
      901 gccgcgggtc tccgagccgt cgaacacgag cacgtcggcc gccccttcga agggggtctc
      961 ctctcccgcc ggatcgacgt cgcgcgagac gacggacgcg cccagcgccg ccgcccgctc
     1021 ccgcaccgcg ccgccgagct ccgccgcacc cgcgaccacc atcgccacgc cgtccagcac
     1081 accatccctg aggaccacag cggccaccct acgcaagcac ggtgccaggc accgttcctg
     1141 cgtcagcggt cggtgatgac gctgccgacg cgctcctcct cgtcgaatgc gatcgtgagc
     1201 gcgtcgccgt actcccaggt gagcgagccg ccgctccgcc tgacgctctc gggcggcccg
     1261 aggcgcttgc ggacctcggc cggcgtgcgc ccgtcgacga gccggcagcg cgacacggcg
     1321 agcgcggcga gcgtgcgcgt ggtgcggttc cggtggagat cccgtgcaag aaaggggtca
     1381 gacccctttc ttgcgccgtc aggccggggc ggccttcttg cgcccggcgc gctcggcgcg
     1441 gcgcagctcg cgcacgcgct tgacgacgcc cgcgcggccg tcggcctcga gctcggcgta
     1501 gagcgcgcgg atctccgcga agatctggtc ggcgaccgcc tgctgctgct cgcgcgtcgg
     1561 gtcctccacg cggtcccaga tgatcgggtc gccgtagcgg accgtgacct tcgggaactg
     1621 caggcgcttc cagttgcgca ccttcgagga gccgtggatc gcgaccggga cgatcggcgc
     1681 gccgctcatc agcgccagcc ggccgatgcc gcgcttgggc ttgtcggaca gcgcgcccgt
     1741 gcgcgagcgg ccgccctcgc agtacatcgc gaccgtgccg ccgcgcgcga ggatccccgt
     1801 ggcggtgatg aacgcgtcct cgtcggcgta gccgcgccgc accgggaaca cgccgccgtg
     1861 cgtgtagatc cactgcagcg gccgggtgaa gagctgcgac ttggccatga agcggacctt
     1921 gcgccggatc gagacaccga ggaagaagtg gtccatgaag gagaagtggt tgggggcgag
     1981 gatcaccgcg ccgtcgccgc gcaccttctc ggcggcgatc ccgcgcgtgc ggaagaagat
     2041 ccacgcgtac agcgtcgtgg cgatgcgcac ggcctcgtag acccagtcgg ggtcgcgcgt
     2101 gcgcgagcgc tcgtggaagc gcgcgaagta ctcgaccgga cgcggatcct tgtagacctg
     2161 cgccttcatc ggcgcgaggt ccttggggcg ttcctgctcc tccatgggaa tctgacttta
     2221 gcctcgatcc gccacgacgc tcagcgtgcc cagccgcggc tgcgctcgag cgcgcggtgc
     2281 cagccgtcga gcaggctctc gcgctcgtcc tccgacagcc gcggttcgta cgtcgcgcgg
     2341 gtgtcgccga tctccgccac ctgggacagc gtcagcaggt ccgcgccgac ccccgccagc
     2401 agcgcggcgc cgaacgcggt cgtctcggc
//
LOCUS       DASSYW010000224         2299 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1221077, whole genome shotgun sequence.
ACCESSION   DASSYW010000224 DASSYW010000000
VERSION     DASSYW010000224.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2299)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2299)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2299
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1221077"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(192..701)
                     /locus_tag="VFN38_03490"
     CDS             complement(192..701)
                     /locus_tag="VFN38_03490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010848.1"
                     /translation="MRTLLVVLIVAASALFVVAVSIERGNERAHHAEAGEVAPESAEP
                     ASAEEEAHTAGADRGEELRPLGIDVEAWPFVAAAALTSLALAIAAWLRPRSDSLLIGV
                     GLVMLGFAVLDIREVFHQADIHETGLAVLAAVIAALHLAAAAVAGRMAITTRAAHTSS
                     TGPTGTMPA"
     gene            complement(1464..>2299)
                     /locus_tag="VFN38_03495"
     CDS             complement(1464..>2299)
                     /locus_tag="VFN38_03495"
                     /inference="COORDINATES: protein motif:HMM:NF019982.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HET9010849.1"
                     /translation="QFPWDWSAPPSARRAQWNAAFAALAPGRFGPFSPRVLSADVRES
                     GQACLDWPAPASTEPPVPDGASYPPVPALVMGGDLDGAVPSVARAYARQFPAGRYVEL
                     ANVGHGAAFSGPCAMSILRTFVTRLAPGDVACARRAGPVLGYSRFPLRVRDVRTRVRR
                     LAGDRSHPRDRRVAAAAAETLDDTATHPSSGHGLRGGRCVLTPVKMLRLSRCRFVEDL
                     TVSGTGRLDPDTNILSAGLSLSGPGTTRGVLRLRPRGANQVATGKLGHRRVHLLVAMR
                     Q"
BASE COUNT          342 a          815 c          845 g          297 t
ORIGIN      
        1 ctgagcttcc ggggcgagtt gcgcgacgca aggtcgccga gatggtcgtt agcggcggta
       61 cccaccacaa ctgactcagg gcgggcgcaa tagcgatcgg tgaccagcgt cgcccatgcg
      121 aacgtcgcct tacgagttag acgccgccga tgtccgcgac tacggcgaga tggacaacgc
      181 gcggagcggg gtcacgccgg catcgtgcca gtcggcccgg tcgacgaagt gtgtgccgcg
      241 cgcgtagtga tggccatgcg gcctgcgacc gccgctgccg ccagatgtag cgcggcgatg
      301 acggccgcaa ggaccgcaag tccggtctcg tggatatcgg cctgatggaa cacctcacgg
      361 atgtcgagca cggcgaatcc gagcatcacc agccccaccc cgatgagcag cgagtccgac
      421 cgcgggcgca accaggccgc gatggcgagc gccagtgagg tcagcgcggc ggcagcgacg
      481 aacggccatg cctcgacatc gatgccgagc gggcgcaact cctccccgcg atccgcaccg
      541 gctgtgtgcg cttcctcctc tgcgctcgcc ggctcggccg attccggcgc gacctcgccc
      601 gcctcggcgt ggtgtgcccg ctcgttgccg cgctcgatgc tgacggcgac gacgaacaac
      661 gcgctcgcgg ccacgatcag gacgacgagc agcgtgcgca tcagcagctg ctccggcgcc
      721 tcgtccggcg atgcaggatc agccccactg tggcggccag gatgacggca cacgcgatgc
      781 ccagccaccc gccgatcgcg ctgccggcga ccgcgccgat cacggcgggc tcgacctcgc
      841 agcacaaggg acgtgacccc gggctgcggc ctctcgcgtt gccctgggtg cccgagtggt
      901 gccacgggtc tcccgccgaa cggtccaact tggctctgaa ccgtgcttat cgtgcgatag
      961 cgagacccgg actcgaaccg gggacaccac gatttcagac gaggcgcgcc ggacgctgcc
     1021 ttcgaaccgg gcgttaccca ctgggtaccc ggccgagcgt gaggcggctg ctcacccgcc
     1081 gccgaagtgc cgcgtgggct ggcgccagtg gcgtcaccca ggagcggagc gccgcgcctg
     1141 ctgcgaccgg cgaccccttc cgctgtccct ggaagtggtc agcgaggccg ctcccaaaga
     1201 cagagaaccg cgctgcagcg gggtttctca agccctctgc cggactcgaa ccggcgaccc
     1261 cttccttacc atggcggtcc cgcgatcgcg gtggatcctc tccagacgga cggaaccgct
     1321 gcgcggcggc gcctcgcgtc gccggggcaa gcggtagcga ccggcacgtt tcgacacctc
     1381 cgggacccac tgggtaccca ggcgacgacg cgataagagg cgggggaggc cgagtcgtcg
     1441 ccgcgtgccg tccgagtggg gcgctactgg cgcattgcta cgagcaggtg gacgcggcgg
     1501 tgtcccagct tcccggtcgc gacctggttc gcgccgcgcg gtctgaggcg gagcacgccg
     1561 cgtgtggtgc ccgggccgga gaggctgagg ccggcgctga ggatgttcgt gtcggggtcc
     1621 agccgtccgg tgccgctgac ggtgagatcc tcgacgaagc ggcagcggct cagccgcagc
     1681 atcttgacgg gcgtgaggac gcagcgtcct ccgcgaaggc cgtggccgct gctcgggtgg
     1741 gtcgccgtgt cgtcgagcgt ttcggcggcg gccgcggcga cgcgacgatc ccgcgggtgc
     1801 gagcggtccc cggccaatct ccggacgcgt gtgcgcacgt cgcgcacgcg tagcgggaat
     1861 cgcgagtagc cgagcaccgg ccccgcgcgc cgcgcgcacg ccacgtcgcc cggcgcgagc
     1921 cgggtcacga aggtgcgcag gatcgacatc gcgcacgggc cgctgaaggc ggcgccgtgt
     1981 cccacgttgg cgagctcgac gtagcgaccg gccgggaact gccgggcgta ggcgcgtgcg
     2041 acggagggga ccgcgccgtc gagatcgcca cccatcacga gtgctgggac gggcggatag
     2101 ctcgcgccgt cggggaccgg cggctcggtc gacgccggcg cgggccagtc caggcacgcc
     2161 tggcccgact cccgcacgtc ggcgctcagc acgcgcggcg agaacgggcc gaagcggccc
     2221 ggagcgagcg cggcgaacgc ggcgttccat tgcgcgcggc gggcggacgg cggggccgac
     2281 caatcccacg ggaactgct
//
LOCUS       DASSYW010000225         2161 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_981501, whole genome shotgun sequence.
ACCESSION   DASSYW010000225 DASSYW010000000
VERSION     DASSYW010000225.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2161)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2161)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2161
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_981501"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            8..>2161
                     /locus_tag="VFN38_03500"
     CDS             8..>2161
                     /locus_tag="VFN38_03500"
                     /inference="COORDINATES: protein motif:HMM:NF020083.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase-related protein"
                     /protein_id="HET9010850.1"
                     /translation="MHDEFTDGQAPREYRPVTIVDASDRKPLEIRVEVPVEDMGSLGR
                     PVPVPSGPASQRPARVSIWASIYPRLLELIRSDRSTLLFVNSRRLAERLAGALNDLAE
                     EPLVRSHHGSLAREARSEVEDLLKAGRIRALVATSSLELGIDMGAIDLVVQIESPPSV
                     ASGLQRIGRAGHQVGAASEGVIFPKFRGDLVACAAVARAMHEGKVESTRYPRNPLDVL
                     AQQLVAIAGLDPWNVDDLYRLVRRAAPFADLGRRMFDGVLDMLSGRYPSDEFAELRPR
                     ITWDRVKNTVVGREGAVRVAIANAGTIPDRGLYGVFLAGANKPTRVGELDEEMVFETE
                     VGDTFTLGASTWRVEDITHDRVLVSPAPGEPGKMPFWHGDQAGRPVELGLAIGKLVRE
                     LGDTPKPAAITRLTEQHGLDTLAAENVLQYLAEQAAAGGVPDDRTLVIERCLDELGDW
                     RLCVLSPLGSRIHAPWAMAVTALVRSRTGVDVEVMWGDEGFVVRFPETEQPPDPQLMI
                     PDADEVEGLVLRQLGSTSLFAARFRETAGRALLLPRRRAGQRTPLFLQRKRASDLLAV
                     AARFGSFPIVLETYREVLRDHFDMPGLVDVLRQVGTRARRITTIDSTQPSPFAASLLF
                     SYVANYIYDGDAPLAERRAQALSVDLAQLRELLGDAELRDLLDPEALEDTERKLQQLE
                     DGYKARTADGIHDLLLRIGDLTLHEILERSSLAGAA"
BASE COUNT          307 a          772 c          761 g          321 t
ORIGIN      
        1 ggaagacgtg catgacgaat tcaccgatgg gcaggctcca cgcgagtacc ggcccgtcac
       61 catcgtcgat gcgtcggatc gcaagccgct cgaaatccgc gtcgaagtcc ccgtcgagga
      121 catgggcagc ctcgggcgtc cggtgcccgt gccgagtggg ccagcctcgc agcggccggc
      181 gcgcgtgtcg atctgggcgt ccatctaccc gcggctgctg gagctgattc gctcggaccg
      241 ctcgacgctg ctcttcgtca acagccgccg cctcgccgag cggctcgccg gcgccctcaa
      301 cgacctcgct gaggagccgc tcgtgcgctc gcaccacggg tcgctggcgc gcgaggcgcg
      361 gagcgaggtg gaagacctgc tgaaggcggg gcgcatccgc gcgctcgtcg ccacgtcgtc
      421 gctcgagctc ggcatcgaca tgggcgccat cgatctcgtg gtgcagatcg agtcgccgcc
      481 gtcggtggcg agcggcctgc agcgcatcgg ccgcgcgggg caccaggtgg gcgcggccag
      541 cgaaggggtg atttttccca agttccgcgg cgatctggtg gcctgcgccg cggtcgcccg
      601 cgcgatgcat gagggcaagg tcgaatccac ccgctatccg cgcaacccgc tcgacgtgct
      661 ggcgcagcag ctcgtggcca tcgccggact cgacccgtgg aacgtggacg atctctaccg
      721 gctggtgcga cgcgcggcgc cgtttgcgga tctgggccgg cgcatgttcg acggcgtgct
      781 cgacatgctg tcgggccgct atccgtccga cgagttcgcc gagctgcgcc cgcggatcac
      841 gtgggatcgc gtgaagaaca ccgtcgtcgg acgcgagggc gcggtgcgcg tcgccatcgc
      901 caacgccggc accatccccg accgcggcct ctacggcgtg tttctggccg gcgcgaacaa
      961 gccgacgcgc gtgggcgagc tcgacgaaga gatggtcttc gagacggagg tcggcgacac
     1021 cttcacgctc ggcgcctcta cctggcgcgt cgaggacatc acgcacgatc gcgtgctggt
     1081 gtcgcccgca cccggcgagc ccggaaagat gccgttctgg cacggcgacc aggccggccg
     1141 gcccgtggag ctcggcctgg ccatcggcaa gctggttcgc gaactgggcg acacgccgaa
     1201 gccggccgcc atcacgcggc tcaccgaaca gcacggtctc gacacgctcg ccgcggagaa
     1261 cgtgctgcag tacctcgcgg agcaggccgc ggcaggcggc gtgcccgacg accggacgct
     1321 cgtcatcgaa cgctgtctcg acgagctcgg cgactggcgc ctgtgcgtcc tctcgccgct
     1381 cggcagccgg atccatgcgc cgtgggcgat ggcggtgacg gcgctcgtgc gcagccgcac
     1441 cggcgtggac gtggaggtga tgtggggcga cgaaggcttc gtcgtccgct tccccgaaac
     1501 cgaacagccg cccgacccgc agctgatgat cccggacgcc gacgaggtcg aagggctcgt
     1561 gttgcgccag ctcggctcga cgtcgctgtt tgccgcgcgc ttccgcgaaa cggcgggacg
     1621 cgcgctgctc ctgccccgcc gccgcgccgg tcagcgcacg ccgctcttcc tgcagcgcaa
     1681 gcgcgcgtcg gacctgctgg cggtggcggc gcgcttcggg tcgttcccga tcgtgctcga
     1741 aacctatcgc gaggtgctgc gcgaccactt cgacatgccc gggctcgtgg acgtgttgcg
     1801 gcaggtcggc acgcgtgcgc gccgcatcac caccatcgac tcgacgcagc cgtcgccctt
     1861 cgccgcgtcg ctgctcttca gctacgtcgc caactacatc tacgacggcg acgcgccgct
     1921 ggcggaacgc cgcgcgcagg cgctgtcggt agacctggcg cagctgcgcg agctgctggg
     1981 cgacgcggag ctgcgcgacc tgctcgatcc ggaggcgctc gaggacaccg agcggaaact
     2041 gcagcagctc gaagacggct acaaggcgcg cacggccgac ggtatccacg accttttgct
     2101 gcgcatcggc gacctgacgc tccacgagat cctggaacgc tcgtcgttgg ccggcgccgc
     2161 t
//
LOCUS       DASSYW010000226         2007 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1490909, whole genome shotgun sequence.
ACCESSION   DASSYW010000226 DASSYW010000000
VERSION     DASSYW010000226.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2007)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2007)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2007
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1490909"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..683
                     /gene="terL"
                     /locus_tag="VFN38_03505"
     CDS             <1..683
                     /gene="terL"
                     /locus_tag="VFN38_03505"
                     /inference="COORDINATES: protein motif:HMM:NF036421.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phage terminase large subunit"
                     /protein_id="HET9010851.1"
                     /translation="WPERFPIEKLERIKRRVGSYFWNALFQQRPRPPEGSKFKIEWIR
                     TVDNFPRLPGTRYVRFWDLAGTAAGGDYTVGALVARTPDGMYYLIDVARGQWSSGRRD
                     AEIRSTAILDADTYGAEVVIWGEQEPGSSGIDAAAAFRKNLEGFNVHTEPASGSKELR
                     ADPLASAAEGRTFAFVRGAWNAAARREFADFPRGKHDDTVDATSGAYNKLARGRRPFN
                     PNELERAA"
     gene            709..>2007
                     /locus_tag="VFN38_03510"
     CDS             709..>2007
                     /locus_tag="VFN38_03510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010852.1"
                     /translation="MATAIAPTTVSSQSATGSTHFLDSTHPIWDREQETWVRNERVVR
                     AGRLVWDYLARFRYEYGVGEQGYRDRQQAIVFLNFADIYLTEMCGQLMRHAPTPGNGL
                     DFAELGEIGRTGRSPSPSNAELLYYNTDGVGVYGSEWDPYWTGVMKRAGVTGHRWCVA
                     ETPRRREGVRPSLRAERILKIRPYMVDHSPVAVRNWDDQDGDLSFAIIDMPYRGIKVE
                     GDLYTATNGGARLLYTAEGFTDFGPAYKAGGWWLFSPERTILASSETTRAAARSGWES
                     TDGRIPMFPMFYERYAGTKDEPSMSRSGVDELCQMAIAYMNMVSARNFDAWDAAASIL
                     LLLGVSDTQVHNAVAKQWKDGYKLISVPADPLTNVVPQVHDGSMGTVTSDVFKGATEE
                     IIAAARQTAALEATSVPDSSGASKTAGFGQVKAPRLALMAS"
BASE COUNT          360 a          756 c          646 g          245 t
ORIGIN      
        1 tctggcccga gcggtttccc atcgaaaagc tcgaacgcat caagcgccgc gtcgggagct
       61 acttctggaa cgcgctcttc cagcagcgac ccaggccgcc cgagggcagc aagttcaaga
      121 tcgaatggat ccgcaccgtc gacaacttcc cccggttgcc cggcacccgc tacgtccggt
      181 tctgggacct cgccggcacg gccgccggcg gcgactacac cgtcggcgcg ctggtcgcgc
      241 gcacccccga tgggatgtat tacctcatcg acgtcgcccg cggccaatgg tcgagcggcc
      301 ggcgcgacgc cgagatccgc agcaccgcca tcctcgacgc cgacacctac ggcgccgagg
      361 tggtgatctg gggcgagcag gagccaggga gcagcggcat cgacgccgcg gccgccttcc
      421 gcaagaacct cgaaggcttc aacgtccaca ccgagccggc gagcgggagc aaggaacttc
      481 gcgccgaccc cttggccagc gcggccgagg gccgtacctt cgccttcgtg cgcggggcat
      541 ggaacgccgc cgcgcggcgg gagttcgccg acttcccgcg cggcaagcac gacgacacgg
      601 tcgacgccac gagcggagcc tataacaagc ttgcccgcgg ccgccggccc ttcaacccga
      661 acgagctcga acgcgccgcc tagaccccga gagaggagcc cgaccccaat ggccaccgcc
      721 atcgccccga cgaccgtcag cagccagagc gccaccggct ccacgcactt cctcgacagc
      781 acgcacccga tctgggatcg cgagcaggaa acatgggtgc gcaacgagcg cgtcgtgcgc
      841 gccggccgcc tcgtctggga ctacctcgcg cgcttccgct acgagtacgg cgtcggcgag
      901 cagggctacc gcgaccggca acaggcgatc gtgttcctca acttcgccga catttacctg
      961 accgagatgt gcggccagct gatgcgccac gccccgacgc caggcaacgg cctcgacttc
     1021 gccgagctcg gcgagatcgg ccgcaccggc cggagcccga gcccgagcaa cgccgagctg
     1081 ctctactaca ataccgacgg cgtgggcgtc tacggcagcg agtgggaccc ctactggacc
     1141 ggcgtgatga agcgcgccgg cgtgaccggc caccgctggt gcgtcgccga gaccccgcgc
     1201 cggcgcgagg gcgtgcgccc gagcctccgc gccgagcgca tcctcaagat ccgcccctac
     1261 atggtcgacc acagccccgt cgccgtgcgg aattgggacg atcaggacgg cgacctcagt
     1321 ttcgccatca tcgacatgcc ctaccgcggc atcaaggtcg agggcgacct ctacaccgcg
     1381 acgaacggcg gcgcccgcct cctctacacc gccgagggat tcaccgactt cggccccgcc
     1441 tacaaggccg gcggctggtg gctcttcagc cccgagcgca ccatcctcgc gagcagcgag
     1501 accacgcgcg ccgcggcgcg cagcggctgg gagagcaccg acgggcgcat ccccatgttc
     1561 ccgatgttct acgagcgtta cgccggcacg aaggacgagc cgagcatgag ccggagcggc
     1621 gtggatgagc tctgccagat ggcgatcgct tacatgaaca tggtcagcgc gcgcaacttc
     1681 gacgcgtggg acgcggccgc cagcatcctc ctcctcctcg gcgtgagcga cacccaggtc
     1741 cacaacgccg tcgccaagca atggaaggac ggctacaagc tgatcagcgt ccccgccgac
     1801 ccgctgacca acgtggtgcc gcaggtccac gacggcagca tgggcaccgt gacgagcgac
     1861 gtgttcaagg gcgccaccga ggagatcatc gccgcggcca ggcagaccgc cgccctcgaa
     1921 gcgacgagcg tccccgacag cagcggcgcc agcaaaacgg ccggcttcgg ccaggtgaag
     1981 gcgccgcgcc tcgcgctcat ggcgagc
//
LOCUS       DASSYW010000227         4798 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1255905, whole genome shotgun sequence.
ACCESSION   DASSYW010000227 DASSYW010000000
VERSION     DASSYW010000227.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4798)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4798)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4798
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1255905"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1836
                     /gene="infB"
                     /locus_tag="VFN38_03515"
     CDS             <1..1836
                     /gene="infB"
                     /locus_tag="VFN38_03515"
                     /inference="COORDINATES: protein motif:HMM:TIGR00487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HET9010853.1"
                     /translation="DVVSREEMEAQREAERERERKTVHVNEFITVSELAQILKVSPTE
                     IVGFAFKNLGLMITVNQRLDFDQIEIVAGEFGFQAVREDEYQAEEVGTVVEDTPEDMK
                     PRPPIVTIMGHVDHGKTSLLDYIRKANVVAGEAGGITQHIGAHHVQTPGGRMITFLDT
                     PGHEAFTAMRARGAQVTDEVILVVAADDAVMPQTIEAISHAKNAGVPMIVAINKIDLP
                     QANAMKVKQDLLQHGVVLEEFGGTTLSTEISAKKGTGIPELLEQVLLQAELLDLKANP
                     DKRATGTVVEAQLDAGKGPVATVLVQSGTLRVGDDFIVGMYSGRVRALLDERGKAVKS
                     AGPAIPVQVLGMQGVPMAGDQLLVVEDAGAAREVAQRRERLDREAKSRRTTRGVTLED
                     FMKESTAGEVRSLRILIKADQGGPAEALADALQQLGTSEVKVEVVHRGVGAITESDIL
                     LARASGAIIIGFHVRPDNNARAAAERENVDIKLYRIIYEAVADVRLALEGMLRPEQRE
                     VVLGEAEVLETFKVPKIGLIAGCAVRSGIIRRDARVRVIRDSVEIFEGAIHSLRRFKD
                     DVKEVREGFECGIGIENFNDIKVGDRIENYRTEEVARTLESAPQG"
     gene            1917..2333
                     /gene="rbfA"
                     /locus_tag="VFN38_03520"
     CDS             1917..2333
                     /gene="rbfA"
                     /locus_tag="VFN38_03520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HET9010854.1"
                     /translation="MSPEHHRSDRVAAAMREEIATFLANDVKDPRIMGLVTVTAVEIT
                     RDLRHAKVFVSVLGSDSQRAATFEGLDNVATHLRGRVGRALRLRVAPEIEFKNDDSVA
                     HAAHIEQLLAQVRKETPSETTPPAAPPAGSDEGRDD"
     gene            2314..3183
                     /gene="truB"
                     /locus_tag="VFN38_03525"
     CDS             2314..3183
                     /gene="truB"
                     /locus_tag="VFN38_03525"
                     /EC_number="5.4.99.25"
                     /inference="COORDINATES: protein motif:HMM:TIGR00431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004730 - pseudouridylate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HET9010855.1"
                     /translation="MRDATTDGLLLVDKPAGVTSHDVVLAARRAFGESRIGHAGTLDP
                     FATGLLVLLLGRATRLLPHLDGVPKEYEATISLGSETDTDDRDGVTVREAEPPGDAAI
                     AEAIVQLTGSLEQVPPAYSAKRVAGRRAYEAARAGELLELAPARVTVFAWRDVMRDGA
                     TLRATIACGGGTYIRALARDLGRLTGSAAHLAALRRVRSGPFRVEQAVSLDAVRAGEA
                     TLRPALDALPTIPHVPLDADEAERVLRGIAVPRATDGDRAALVDSRSGALVAFAVAAD
                     GSWQPRVVMRKVG"
     gene            3186..4169
                     /locus_tag="VFN38_03530"
     CDS             3186..4169
                     /locus_tag="VFN38_03530"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: protein motif:HMM:NF004160.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003919 - FMN adenylyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HET9010856.1"
                     /translation="MELLDPHAPLLGSRGTAITVGTFDGVHCGHQDVLARLVARARAT
                     GLPALLVTFEPHPLEVVNPAAAPLLLTTREEKLAALAATGLDLVAILPFTRELAAQSA
                     DAFVDRVLLERFHMRELLIGHDHGFGKGREGDVETLRSLGASRGFGVEVVPPVLTEAG
                     EPISSSRIRRAVAAGRLEEAAAALGRDYAVAGRVIPGDARGRGLGFRTLNLQPESDRK
                     LLPPDGVYAVDVRTPRGRFGGMMNLGGRPTFGDERRMLEAHLFDADGDFYGDLVQVAF
                     VRRLRDTMRFDGPDALKRQLADDERAARLALTPIAGPDNLNGSTPAPPSTP"
     gene            4174..>4798
                     /locus_tag="VFN38_03535"
     CDS             4174..>4798
                     /locus_tag="VFN38_03535"
                     /inference="COORDINATES: protein motif:HMM:NF045451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010857.1"
                     /translation="MSNLKYRLGIILALILLSGYALFPRDVKSRQRRADGTFYDTTTR
                     RIPLRKGLDLSGGMHLALDVDETKGTVANKSEAIDRALKVVRTRIEGMGVSETVIQKA
                     GNDRILVDIPGIEDRERAIKIAQDQAFLQFQITDKTKGLEKTLPRLDAIAKERGFGEV
                     ASAAGAKAPAPTAGLGGLLTGADSTADSSKAKTAVAKRDSAKADSAAI"
BASE COUNT          749 a         1717 c         1665 g          667 t
ORIGIN      
        1 gacgtcgtct cgcgcgaaga gatggaggcg cagcgcgagg cagagcgcga acgcgagcgg
       61 aagaccgttc acgtcaacga gttcatcacg gtcagcgagc tcgcgcagat cctgaaggtg
      121 tcgcccacgg agatcgtcgg cttcgccttc aagaacctgg gcctcatgat cacggtgaac
      181 cagcgcctcg acttcgatca gatcgagatc gtcgccggcg agttcggctt ccaggccgtc
      241 cgcgaggacg agtaccaggc cgaggaagtg gggaccgtcg tcgaggacac gccggaagac
      301 atgaagccgc ggccgccgat cgtgaccatc atgggtcacg tcgatcacgg caagacctcg
      361 ctgctcgact acatccgcaa ggcgaacgtc gtggccggcg aggcgggggg catcacccag
      421 cacatcggcg cgcatcacgt gcagacgccc ggcggccgga tgatcacctt cctcgacacc
      481 cccggccacg aggcgttcac cgccatgcgt gcgcgcggcg cccaggtcac ggacgaggtc
      541 atcctcgtcg tcgcggccga cgacgccgtc atgccgcaga cgatcgaggc aatttcgcac
      601 gcgaaaaatg ccggtgtccc aatgatcgtg gcgatcaaca agatcgacct gccgcaggcg
      661 aacgcgatga aggtgaagca ggatctcctg cagcacggcg tcgtgctcga ggagttcggc
      721 ggcaccacgc tcagcacgga gatctccgcc aagaagggca ccggcattcc cgagctgctg
      781 gagcaggtgc tcctccaggc cgagctgctg gacctcaagg ccaatccgga caagcgcgcc
      841 acgggtaccg tcgtggaagc gcagctcgac gccggcaagg gtcccgtggc caccgtgctc
      901 gtgcagagcg gcacgctgcg cgtcggcgac gacttcatcg tcggcatgta ctcgggccgc
      961 gtgcgtgcgc tgctcgacga gcgcggcaag gcggtcaagt ccgccggtcc cgccatcccg
     1021 gtgcaggtgc tgggcatgca gggcgtgccg atggcgggcg accagctcct cgtcgtcgag
     1081 gacgccggcg cggcccgcga agtggcgcag cgtcgcgagc gtctcgaccg cgaggccaag
     1141 agccgccgca ccacgcgcgg cgtcacgctc gaggacttca tgaaggagtc caccgctggc
     1201 gaggtgcgct cgctgcgcat cctcatcaag gcggaccagg gcggaccggc ggaagcgctc
     1261 gccgatgcgt tgcagcagct gggcacgagc gaggtcaagg tcgaggtggt gcaccgcggc
     1321 gtcggcgcca tcaccgagag cgacatcctg ctcgcccgcg cctccggcgc gatcatcatc
     1381 ggcttccacg tgcgccccga caacaacgcg cgcgcggcgg ccgagcggga gaacgtggac
     1441 atcaagctgt accgcatcat ctacgaggcg gtcgccgacg tgcggctcgc cctcgagggc
     1501 atgctgcggc cggagcagcg cgaggtggtg ctcggcgagg ccgaggtgct cgagaccttc
     1561 aaggttccga agatcgggct catcgccggc tgcgcggtgc gcagcggcat catccgtcgc
     1621 gacgcgcgcg tccgcgtcat ccgcgacagc gtcgagatct tcgagggcgc gatccattcg
     1681 ctgcgccgct tcaaggacga cgtgaaggag gtccgcgaag gcttcgagtg cggtatcggc
     1741 atcgagaact tcaacgacat caaggtcggc gaccgcatcg agaactaccg caccgaggaa
     1801 gtcgcgcgga cgctcgagtc ggctcctcaa ggctgacgag catggcacga ggggggtggg
     1861 cgatcccggt cgggacgccg gccaccctcc ctccgtcctc ctgcaccggt cctcacatgt
     1921 ctcctgaaca tcaccgctcc gaccgcgttg ccgcggcgat gcgcgaagag attgccacct
     1981 tcctcgccaa cgacgtcaag gatccccgca tcatgggact cgtgacggtc accgcggtcg
     2041 agatcacccg cgacctccgg cacgcgaagg tgttcgtcag cgtgctcggc tccgactcgc
     2101 agcgcgctgc caccttcgag gggctcgaca acgtcgcgac gcatctgcgt ggtcgcgtcg
     2161 gccgcgcgct gcgcttgcgc gtcgcaccgg agatcgagtt caagaacgac gacagcgtcg
     2221 cccacgcggc gcacatcgag cagctgcttg cccaggtgcg gaaggagact ccatccgaga
     2281 ccacgccgcc cgctgcgcct cccgccggct ccgatgaggg acgcgacgac tgacgggctg
     2341 ctcctcgtcg acaagccggc gggggtgacg tcgcacgacg tggtgctggc cgcgcgtcgc
     2401 gcgttcggcg agtcgcgcat cggccacgcc ggcacgctcg atcccttcgc cacggggctg
     2461 ctcgtcctgc tcctgggccg ggccacgcgc ctgctgccgc atctcgacgg cgtgcccaag
     2521 gagtacgagg cgacgatctc cctcggcagc gagaccgata ccgacgaccg cgacggcgtc
     2581 acggtgcgcg aggccgagcc gcccggtgac gcggcgatcg ccgaggcgat cgttcagctc
     2641 accggctcgc tggagcaggt tccgcccgcg tactcggcga agcgcgtcgc cggccgccgt
     2701 gcgtacgagg cggcgcgcgc gggggagctg ctggagctgg cgccggcccg cgtgaccgtg
     2761 ttcgcctggc gcgacgtgat gcgagacggc gccacgctgc gcgccacgat cgcctgcggc
     2821 ggcggcacct acatccgtgc gctggcgcgg gatctcggcc ggctcacggg cagcgccgcc
     2881 catctggccg cgctgcggcg tgtgcgcagc gggcccttcc gcgtcgagca ggcggtctcg
     2941 ctcgacgcgg tgcgcgcggg agaggcgacg ctgcggcccg ccctcgacgc cctgcccacc
     3001 attccgcacg tgccgctcga cgcggacgag gcggagcgcg tgctgcgcgg catcgccgtc
     3061 ccgcgagcca ccgatggtga tcgtgccgcg ctggtcgact cgcgcagcgg cgcgctcgtc
     3121 gccttcgccg tggccgccga cgggtcctgg cagccgcgcg tcgtcatgcg caaggtcggg
     3181 tgaggatgga gctgctcgat ccgcacgctc cgctcctcgg ctcgcgcggg acggcgatca
     3241 ccgtcggcac cttcgacggc gtgcattgcg gacaccagga cgtgctcgcg cggctcgtgg
     3301 cgcgcgcgcg ggcgacgggc ctgcccgcgc tcctcgtcac cttcgagccg catccgctcg
     3361 aggtcgtgaa ccccgcggcg gcaccgctgc tcctcaccac gcgcgaggag aagctcgccg
     3421 cgctcgcggc gaccggactg gatctcgtcg ccattctgcc gttcacccgc gagctcgccg
     3481 cgcagtccgc cgacgcgttc gtggaccgcg tcctcctgga gcgcttccac atgcgcgagc
     3541 tgctcatcgg gcacgatcat ggattcggca aggggcgcga gggtgacgtc gaaacgctcc
     3601 gcagcctcgg cgcgtcgcgc ggcttcggcg tggaggtcgt gccgccggtg ctgaccgagg
     3661 cgggcgagcc gatcagcagc tcgcgcatcc gccgcgccgt cgccgcggga cgactcgagg
     3721 aagccgccgc cgcgctgggg cgcgactacg ccgtggccgg ccgcgtcatt cccggcgacg
     3781 cgcgcgggcg cggcctcgga tttcgcaccc tcaacctcca gcccgagtcg gaccgcaagc
     3841 tcctgccgcc cgacggcgtc tatgcggtgg acgtgcgcac cccccgcggt cgcttcggcg
     3901 ggatgatgaa tcttggcggc cgccccacct tcggcgacga gcgtcgcatg ctcgaagcgc
     3961 atctgttcga cgccgacggc gacttctacg gcgacctggt gcaggtcgcc ttcgtccgtc
     4021 gcctgcgcga caccatgcgg ttcgacggcc ccgatgcgct caagcggcag ctcgccgacg
     4081 acgagcgcgc ggcccggctc gcgttgacgc ccattgccgg gccggataac cttaatggtt
     4141 ccacgcccgc acctccctcc accccgtagt cgcatgtcca acctgaagta ccgcctgggg
     4201 atcatcctcg cgctcatcct gctgtcgggc tacgcgctct ttccgcgcga cgtgaagtcg
     4261 cgccagcgcc gagccgacgg caccttctac gatacgacga cgcggcgcat ccccctccgg
     4321 aaaggactcg acctgtcggg cggcatgcac ctcgccctcg acgtcgacga gacgaagggc
     4381 acggtggcga acaagagcga agcgatcgat cgcgcgctca aggtcgtccg gacgcgcatc
     4441 gagggaatgg gcgtctccga gaccgtcatc cagaaggccg gcaacgatcg catcctggtg
     4501 gacatccccg gcatcgagga tcgcgagcgc gcgatcaaga ttgcccagga ccaggccttc
     4561 ctgcagttcc agatcaccga caagacgaag gggctcgaga agacgctgcc ccgtctggac
     4621 gcgatcgcca aggagcgcgg gttcggcgag gtcgcgtcgg ccgcgggcgc caaggcgccg
     4681 gcgccgacgg ccgggctggg cggactgctc accggcgcag actccacggc agactcgtcc
     4741 aaggcgaaga ctgcggtggc caagcgcgac agtgcgaagg cggacagcgc cgctatcc
//
LOCUS       DASSYW010000228         2215 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_97160, whole genome shotgun sequence.
ACCESSION   DASSYW010000228 DASSYW010000000
VERSION     DASSYW010000228.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2215)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2215)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2215
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_97160"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..599
                     /locus_tag="VFN38_03540"
     CDS             <1..599
                     /locus_tag="VFN38_03540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010858.1"
                     /translation="ALAPDLALGRARLRPGRVAAFIREPQAANQDALMPATPMSAAEA
                     EDLATFVLRAPLRLAPPPRPTDPLPLLTRPVRFAEVQARVFDRVCRHCHATPDFALGD
                     GGPGNTGGFGFPPRGLDLSSYEGIASGAFDEKGRRRSVFAAAADGPPAMISRLRARRD
                     EEAGRADPALRGMPLGLPALSPEDLQLVESWIAQGRPH"
     gene            678..1787
                     /locus_tag="VFN38_03545"
     CDS             678..1787
                     /locus_tag="VFN38_03545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007406877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004024 - alcohol dehydrogenase activity,
                     zinc-dependent [Evidence IEA];
                     GO_function: GO:0051903 - S-(hydroxymethyl)glutathione
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0006113 - fermentation [Evidence IEA];
                     GO_process: GO:0009404 - toxin metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-(hydroxymethyl)glutathione dehydrogenase/class
                     III alcohol dehydrogenase"
                     /protein_id="HET9010859.1"
                     /translation="MKTRAAVAYAAGKPLVIEDVDLDGPKAGEALIEIKATGVCHTDE
                     FTRSGADPEGLFPVIFGHEGAGIVVDIGPGVSSVQKGDHVIPLYTPECRSCKSCLSRK
                     TNLCTAIRATQGKGVMPDGTSRFSIGGEKIHHYMGCSTFANHTVLPEIALAKIRPDAP
                     FDKVCYIGCGVTTGLGAVFWTAKVTPGANVVVFGLGGIGLNVVQGARIAGADKIIGVD
                     TNPAREALARKFGLTHFVNPKQVSGDLVAHLVELTGGGADYSFECVGNVDLMRQALEC
                     CHRGWGESTIIGVAGAGQEIKTRPFQLVTGRVWRGTAFGGARGRTDVPRIVDWYMNGK
                     IDIDSLITHKLPLDRINEAFDLMHAGTSIRSVIEF"
     gene            1787..>2215
                     /locus_tag="VFN38_03550"
     CDS             1787..>2215
                     /locus_tag="VFN38_03550"
                     /inference="COORDINATES: protein motif:HMM:NF012958.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase-fold protein"
                     /protein_id="HET9010860.1"
                     /translation="MAPALETLSERRCFGGVQGFYRHASDATGGPMRIGVFVPDGADR
                     SPRPALYYLAGLTCTEETFAIKAGAQRAAAALGLVLITCDTSPRAARTPGDDADEDFG
                     LGAGFYVDATQAPWRAAYRMDSYVTRELPAVVEAGFPVRRD"
BASE COUNT          311 a          815 c          783 g          306 t
ORIGIN      
        1 tagcgctggc gcccgatctc gcgctgggac gcgcccgcct gcgcccgggc cgtgtggcgg
       61 ccttcatccg cgaaccgcag gccgcgaacc aggacgcgct catgccggcg acgcccatga
      121 gcgccgccga ggccgaggac ctggccacct tcgtgctgcg cgcgccgctt cggctggcac
      181 cgccgccgcg tccgaccgat cccctgcccc tcctgacccg ccccgtccgg ttcgccgagg
      241 tgcaggcccg tgtcttcgac cgcgtgtgcc gccactgcca cgccacgccc gacttcgcgc
      301 tcggcgacgg cgggcccggc aacaccggcg gcttcggctt cccgccgcgt gggctcgatc
      361 tgtccagcta cgagggcatc gcctccggcg ccttcgacga gaagggccgc cgccgcagcg
      421 tcttcgccgc ggcggccgac ggcccgcccg cgatgatctc gcgcctgcgc gcgcggcgcg
      481 acgaggaggc cggccgcgcc gaccccgcgt tgcgcgggat gcccctgggc ctgcccgccc
      541 tctcacccga ggacctgcag ctcgtcgagt cctggatcgc gcagggacga ccccactgaa
      601 cggacggccg acatcgggga cttccccgat gccttgcgcg ctggtcaccg gggcggcccg
      661 gccctacgtt gcgagccatg aaaacacgcg cggcggttgc gtacgcggcg ggtaagccgc
      721 tggtgatcga ggacgtcgat ctcgacgggc cgaaggcggg cgaggcgctg atcgagatca
      781 aggcgaccgg cgtctgccac accgacgagt tcacgcgctc gggcgccgat cccgaggggc
      841 tgttcccggt gatcttcggc cacgaaggcg ccgggatcgt ggtcgacatc ggccccggcg
      901 tgtcgtcggt gcagaaggga gaccacgtca tcccgcttta cacaccggaa tgccggagct
      961 gcaagtcgtg cctgtcgcgc aagaccaacc tctgcacggc gatccgcgcg acccagggca
     1021 agggcgtcat gcccgacggc accagccggt tctcgatcgg cggcgagaag attcaccact
     1081 acatgggctg ctcgacgttc gcgaaccaca ccgtgctgcc ggagatcgcg ctggccaaga
     1141 tccgacccga cgccccgttc gacaaggtct gttacatcgg ctgcggcgtg acgaccggcc
     1201 tgggcgcggt gttctggacg gccaaggtga cgcccggcgc gaacgtggtc gtcttcggcc
     1261 tgggcggcat cggcctcaac gtcgtgcagg gggcgcggat cgcgggcgcc gacaagatca
     1321 tcggcgtcga cacgaacccg gcccgcgagg cgctggcgcg caagttcggc ctcacccact
     1381 tcgtgaaccc caagcaggtg tcgggcgatc tcgtcgcgca cctcgtcgag ctgaccggcg
     1441 gcggcgccga ctacagcttc gagtgcgtcg gcaacgtcga tctgatgcgc caggcgctgg
     1501 agtgctgcca ccggggctgg ggcgaatcga ccatcatcgg cgtcgcgggc gcgggccagg
     1561 agatcaagac ccgccccttc cagctggtga ccgggcgggt ctggcgcggc acggcgttcg
     1621 gcggcgcgcg cggccgcacc gacgtgccgc ggatcgtcga ctggtacatg aacgggaaga
     1681 tcgacatcga cagcctgatc acgcacaagc tgccgctcga ccggatcaac gaggcgttcg
     1741 atctgatgca cgcgggaacg tcgatccgca gcgtgatcga attctgatgg cgcccgcgct
     1801 ggagacgctg tccgagcggc gctgcttcgg cggcgtgcag gggttctacc gccacgcctc
     1861 ggacgcgacc ggcgggccga tgcgcatcgg tgtcttcgtc cccgacggcg cggaccggtc
     1921 gccgcggccg gcgctctact atctcgccgg attgacctgc accgaggaga cgttcgcgat
     1981 caaggccggc gcgcagcgcg cggcggccgc actggggctg gtgctgatca cctgcgatac
     2041 cagcccgcgg gcggcgcgca ccccgggcga cgacgccgac gaggacttcg gcctcggcgc
     2101 gggcttctac gtcgacgcga cccaggcgcc ctggcgcgcc gcgtaccgca tggacagcta
     2161 cgtcacgcgc gagctgcccg ccgtcgtcga ggcgggcttc cccgtgcggc gcgac
//
LOCUS       DASSYW010000229         2349 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_283390, whole genome shotgun sequence.
ACCESSION   DASSYW010000229 DASSYW010000000
VERSION     DASSYW010000229.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2349)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2349)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2349
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_283390"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1575)
                     /gene="metG"
                     /locus_tag="VFN38_03555"
     CDS             complement(<1..1575)
                     /gene="metG"
                     /locus_tag="VFN38_03555"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: protein motif:HMM:NF008900.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0004825 - methionine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HET9010861.1"
                     /translation="MKTFFLTTAIDYVNSRPHLGTAYEKIAADVVARYKRLAGFDVHF
                     LMGNDEHSQNVFRKAKELGEDPLAYCDRMAQEFRDVWARLDISFDDFIRTTEARHRAG
                     VQELIRRITAAGDIYEGHYEGWYCVSCEAFKQEKDLVDGLCPIHRTKPDWIREKNYFF
                     RLSKYQDALLKLFGERPEFLVPDSRRNEILRLIEGGLEDISVSRAGQSWGIPMPQDPA
                     SVVYVWFDALINYISAVGLGTDDRLLQAWWPADLHVIGKDITRFHTVIWPAMLISAGI
                     EIPRQVFGHGWVHLKGEKMSKSLGAAIEPLDAIKAYGPDPLRLYLVKEITFGGDGDFS
                     WERFEERYNVDLANNLGNLVSRIGAMAEKYRGGRLDATGAAGRLSAVAAEALASYRSA
                     MDAYALEGGVAAAFRLVDAANEYIASTEPWKLASDPAKADQLSQVLFDVAEAVRIAAV
                     LLLPVMPKSAGEILRRVGERKPAAEMRLGEDAVWRNEARTILKGDALWPRVETAAAPK
                     HDSGPEAKRDAKKRSSD"
     gene            complement(1572..>2349)
                     /locus_tag="VFN38_03560"
     CDS             complement(1572..>2349)
                     /locus_tag="VFN38_03560"
                     /inference="COORDINATES: protein motif:HMM:NF014072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="LarC family nickel insertion protein"
                     /protein_id="HET9010862.1"
                     /translation="VHAMERLKADRVTASPLNVGSGTVRCAHGEYPVPAPATARLLEG
                     VPVYAGAVTSELVTPTGALLVTGYASSYGPLPPMRVRAIGYGAGNKDFKGHPNVLRVM
                     VGDDVAASDEETIVVLECEIDDMNPQLFGPLMDHLHDAGALDVFYAPVQMKKNRPGTL
                     VTVVARPPDRARLSGLLFAETTTIGVRYREMQRERLAREIRTVETPLGAIRVKVATRG
                     GRVMNASPEFEDCARIAAAHGLPIKEVQAIATKAWLDGTP"
BASE COUNT          368 a          820 c          746 g          415 t
ORIGIN      
        1 gtcggagctc cttttcttcg cgtccctttt cgcctcgggc ccggaatcgt gcttcggggc
       61 cgccgccgtt tcgacccgcg gccacaaggc gtcacccttg agaatggtgc gcgcctcgtt
      121 gcgccacacg gcgtcttcgc cgaggcgcat ctccgcggcc ggcttgcgtt caccgacccg
      181 ccgcagaatc tcgcccgccg acttcggcat caccggcagc agcagcacgg cagcgatgcg
      241 cactgcttcg gcgacgtcga acagcacctg cgacagctgg tcggccttcg ccggatcgct
      301 ggcgagcttc cacggctcgg tgctggcaat gtactcgttg gccgcgtcga cgaggcggaa
      361 cgccgcggcc acaccccctt cgagggcgta cgcgtccatc gctgaacgat aggacgcaag
      421 cgcctccgcc gcgacagccg acagacgccc ggccgcacct gtcgcatcga gccggccgcc
      481 acggtacttc tccgccatcg cgccgatgcg gctgacgaga ttcccgagat tgttcgcgag
      541 gtcgacgttg tagcgctcct cgaagcgctc ccacgagaag tcgccgtcgc cgccgaacgt
      601 gatctccttg acgagataga gccgcagcgg atcggggccg taggccttga tcgcgtcgag
      661 cggctcgatc gcggccccga gcgacttgct catcttctcg cccttgagat ggacccagcc
      721 gtggccgaac acctggcgcg ggatctcgat gccggcgctg atcagcatcg ccggccaaat
      781 cacggtatgg aaccgcgtga tgtccttgcc gatcacgtgc aggtcggccg gccaccacgc
      841 ctgcaacagc ctgtcgtcgg tcccgagccc gacggcgctg atgtagttga tcagcgcgtc
      901 gaaccagacg tagacgacgc tcgcgggatc ctgcggcatc gggatacccc aggattgtcc
      961 ggcgcggctg accgagatgt cctcgagtcc tccttctatc aaccgcagga tctcgttgcg
     1021 gcggctgtcg ggcacgagga actccgggcg ctcgccgaac agcttcagca gcgcgtcctg
     1081 gtacttcgac aggcggaaga agtagttctt ctcgcgaatc cagtcgggct tcgtgcggtg
     1141 aatcgggcac aggccgtcga cgagatcctt ctcctgcttg aaggcctcgc acgacacgca
     1201 ataccagcct tcgtaatgcc cttcgtagat atcgccggcg gcggtaatcc gccggatcag
     1261 ctcctgcacg cccgccctgt gccgcgcttc cgtcgtcctg atgaaatcgt cgaaggagat
     1321 atcgagcctg gcccagacgt cgcggaactc ctgcgccatg cggtcgcagt atgcgagcgg
     1381 atcctcgccg agctccttcg ccttgcgaaa aacgttctgc gagtgctcgt cgttgcccat
     1441 caggaagtgg acgtcgaacc cggcgaggcg cttgtagcgc gccacgacgt cggcggcgat
     1501 cttctcgtac gccgtgccga gatgcggacg gctgttcacg tagtcgatcg ccgtcgtcag
     1561 aaagaaagtc ttcacggtgt gccgtccagc catgctttcg tcgcgatcgc ctgcacttcc
     1621 ttgatcggca ggccgtgcgc cgccgcgatg cgggcgcagt cctcgaactc cggcgacgcg
     1681 ttcatcacgc ggccgccgcg cgtggcaacc ttgacgcgaa tcgccccgag cggcgtctcg
     1741 accgtccgga tctcccgcgc caggcgctca cgctgcatct cccgatatct gaccccaatc
     1801 gtcgtcgtct cggcgaagag aaggccggac aggcgcgcgc gatccggggg acgggctacg
     1861 accgtgacga gcgtacccgg gcggttcttc ttcatctgca cgggcgcata gaagacgtcg
     1921 agggcgccgg cgtcatgcag gtgatccatg agcggaccga acagctgcgg gttcatgtcg
     1981 tcgatctcgc attccaggac gacgattgtt tcctcatcgc tcgcggccac gtcgtcgccg
     2041 accatgacgc gcagcacgtt cgggtgcccc ttgaagtcct tgttgccggc gccgtagcca
     2101 atggcgcgga cgcgcatcgg cggcaggggc ccgtagctcg aggcgtatcc ggtcaccagc
     2161 agtgcgccgg tcggcgtcac gagctctgat gtgaccgcgc ccgcatacac cggcacgcct
     2221 tccagcaggc gggcggtcgc cggcgccggg accgggtact cgccgtgcgc gcacctgacg
     2281 gtgccgctgc ccacgttcaa gggggacgcg gtcacgcgat cggccttcag cctttccatc
     2341 gcgtgcacg
//
LOCUS       DASSYW010000230         2640 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_336620, whole genome shotgun sequence.
ACCESSION   DASSYW010000230 DASSYW010000000
VERSION     DASSYW010000230.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2640)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2640)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2640
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_336620"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..238
                     /locus_tag="VFN38_03565"
     CDS             <1..238
                     /locus_tag="VFN38_03565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010863.1"
                     /translation="KRASAAATLSASDGGDDAAMVPAFAAEAEGTEAVSGAPREVRAS
                     SSARVQAEERTAASSREATTRPADGGERRRPPHT"
     gene            253..1119
                     /locus_tag="VFN38_03570"
     CDS             253..1119
                     /locus_tag="VFN38_03570"
                     /inference="COORDINATES: protein motif:HMM:NF016424.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TPM domain-containing protein"
                     /protein_id="HET9010864.1"
                     /translation="MLWHRGLQLIGAILALQTIPVPPPPRGFGTGEADVVVDAARVLP
                     AATVERINRIAFDVHAKSGGEIAVVTMPDLGGRDVADVAREIGRQWKLGAAGKPGDPA
                     RNRGVVILVVPKETSADGRGHFRIETGLGTEGFITDATSGAIQDEALPYLRQADYGSA
                     IELTTLRVAQRFAGEFGFALDTTLAAPDLVRSERYQTGPRGGRGLSPFALFALFVIAS
                     IVLNALRGGRRGRGGCGGGGCLPIFIPMGGGGMGGGGGSWGGGGFGGGGGGFGGFGGG
                     GGFGGGGSSRSW"
     gene            1190..1924
                     /locus_tag="VFN38_03575"
     CDS             1190..1924
                     /locus_tag="VFN38_03575"
                     /EC_number="2.7.7.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase domain-containing
                     protein"
                     /protein_id="HET9010865.1"
                     /translation="MATMTLDDLVSQLRAAYGADLRAVVLYGSAAAGEHVPKRSDYNV
                     LVLVQALPLERLRAAAAVTQAWIGAGNPPPMTMTTDEWRGSADIFPMEYADILDRHRV
                     LYGEPPFEGMQVRPADLRLQVEQQAMGKLLQLRAGVLAAGADSKQQVDLLERSLSTIM
                     VIFRGVLRLLGERPPADYPSLTREVAARAGFDAEPVARVVRHVRGEERLDGKSAGAAL
                     GAYLGAMEQLVQFLDRYTAASTARPG"
     gene            1989..2522
                     /locus_tag="VFN38_03580"
     CDS             1989..2522
                     /locus_tag="VFN38_03580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010866.1"
                     /translation="MRIRTSVLPLLLLGVVACPKDKKKGAGDSVAVAPPIVADTTPTD
                     LSSMPTSLPPAAPDTFKPLPPKKQPRQQAAAPSYPQAPSALMDAVQRSQTVSKFCYQE
                     FGQKVDPSLRGGVAMLVTVGESGITDARVANDNWSSRTGKAVNECLNEKAKLAWKLTP
                     GDVKSGKYYVQLAFTGS"
BASE COUNT          391 a          907 c          998 g          344 t
ORIGIN      
        1 gaagcgggcg tcggcggccg ccacgctgtc ggcgagcgac ggtggcgacg atgccgccat
       61 ggtgccggcg ttcgcggctg aagcggaagg gacagaggcc gtgtccggcg ctccgcgcga
      121 ggtgcgcgcc tcgtcgtcgg cgcgcgtgca ggcggaggag aggacggcgg cgagcagcag
      181 ggaagcgacg actcggcccg ccgacggcgg ggagaggagg cgccccccgc acacctgaag
      241 acgcggagac gagtgctctg gcatagaggg ctgcaactta tcggcgccat cctggcgctg
      301 caaacgatcc ccgttccgcc gcccccccgc ggcttcggca cgggcgaagc cgacgtcgtc
      361 gtggacgccg cccgcgtgct gccggcggcc accgtggagc gcatcaatcg catcgccttc
      421 gacgtgcacg ccaagtcggg cggggagatc gcggtcgtca cgatgcccga cctgggcggg
      481 cgggacgtgg ccgacgtcgc ccgggagatc ggccggcagt ggaagctcgg cgccgccggc
      541 aagcccggcg acccggcgcg caaccgcggg gtggtcatcc tcgtagttcc aaaggagacg
      601 agcgccgacg gccgcgggca tttccgcatc gagacggggc tcggcacgga gggcttcatc
      661 accgacgcca cgtcgggagc gatccaggac gaggcgctgc cctacctgcg gcaggcggat
      721 tacggcagcg ccatcgagct gacgacgctc cgcgtcgcgc agcggttcgc cggcgagttc
      781 gggttcgccc tcgataccac gctcgccgcg cctgacctcg tgcggagcga gcgatatcag
      841 accggaccgc ggggaggtag agggctgtct ccgttcgcgc tgttcgccct gttcgtgatc
      901 gcctcgatcg tgctcaacgc gctgcgcggc ggacgccgcg gccgcggagg gtgcgggggg
      961 ggaggctgcc tgccgatctt catcccgatg ggtggcggcg ggatgggggg gggagggggc
     1021 agctggggcg ggggcgggtt cggtggaggg ggagggggct tcggtggttt cggcggggga
     1081 gggggcttcg gcggcggcgg ctccagccgc agctggtgac cggagcggcc gcgggaggga
     1141 ggcagggcgc gcgaccgtcg cgcgctccgg ggacctggac gggagagaca tggcgacgat
     1201 gacactcgac gatctcgtct cgcagctgcg cgccgcctac ggcgccgacc tgcgggcggt
     1261 cgtcctctac ggatcggcgg cggccgggga gcacgtcccc aagcgctccg actacaacgt
     1321 gctggtgctc gtccaggcgc tccccctcga gcgcctgcgc gccgccgcgg cggtgacgca
     1381 ggcctggatc ggcgccggca atccgccccc catgacgatg acgaccgacg agtggcgggg
     1441 ctcggcggac atcttcccga tggagtacgc cgacatcctc gatcgtcacc gcgtgctcta
     1501 cggcgagccc cccttcgagg gaatgcaggt ccggccggcc gacctccgcc tccaggtgga
     1561 gcagcaggcg atggggaagc tgctccagct ccgcgccggc gtgctcgcgg cgggcgccga
     1621 ctcgaagcag caggtggacc tgctcgagcg aagcctgagc acgatcatgg tgatcttccg
     1681 cggggtcctt cgcctgctcg gcgagcgccc gccggcggac tacccgtcgc tcacccgcga
     1741 ggtggcggcg cgcgccggct tcgacgccga gcccgtggcc cgggtggtgc gacacgtgcg
     1801 cggtgaggag cggctcgacg gcaagagcgc gggcgcggcg ctcggcgcct atctcggcgc
     1861 catggagcag ctggtgcagt tcctcgaccg gtacacggcg gccagcaccg cgcggcccgg
     1921 ctagcccggc tcgagctcgc gggcgagttt cttcggcatc gaccattaca cccagtcaga
     1981 ccaaccccat gagaattcga acgtcggttc ttccgctgct gctgctcggc gtcgtcgcct
     2041 gccccaagga caagaagaag ggggcggggg acagcgtcgc cgtggcgccg ccgatcgtcg
     2101 ccgacaccac gccgacggac ctcagctcga tgccgaccag ccttccgccg gcggcccccg
     2161 acaccttcaa gccgctgccc cccaagaagc agccgcgcca gcaggcggcg gcgccaagct
     2221 acccgcaggc ccccagcgcg ctgatggatg cggtgcagcg ctcgcagacg gtctcgaagt
     2281 tctgctacca ggagttcggc cagaaggtgg atccgagcct gcgcggcggc gtcgcgatgc
     2341 tcgtcacggt cggcgagtcg ggcatcaccg acgcccgcgt ggcgaacgac aactggagct
     2401 cgcgcaccgg caaggccgtc aacgagtgcc tgaacgagaa ggcgaagctg gcctggaagc
     2461 tgaccccggg cgacgtgaag tccggcaagt actacgtgca gttggcgttc acgggaagct
     2521 gacggatcgg gaacgggagt cgggagtcgg tcagcaaggc gtgagaggtg agatgggacg
     2581 cccgccatct cacttctcac gctccacccc cgactcccca ctcccgactc tcgactccca
//
LOCUS       DASSYW010000231         3426 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_719710, whole genome shotgun sequence.
ACCESSION   DASSYW010000231 DASSYW010000000
VERSION     DASSYW010000231.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3426)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3426)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3426
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_719710"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1747
                     /gene="lon"
                     /locus_tag="VFN38_03585"
     CDS             <1..1747
                     /gene="lon"
                     /locus_tag="VFN38_03585"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: protein motif:HMM:TIGR00763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HET9010867.1"
                     /translation="QSEVGKNQREYFLREQLKAIQKELGEGDDQTKDVEELKEKLEAA
                     GLPEVVMKEAMRELDRLSKMPAAAAEYTVSRTYLDWIAMLPWQKRSEETIDLKHTKKV
                     LDDEHSGLEKAKDRILEFLAVRKLNPELKSPILCFAGPPGVGKTSLARSIAQSLGRNF
                     VRVSLGGMRDEAEIRGHRRTYIGALPGQIIQGLRRAEARNPVFILDEIDKLGNDFRGD
                     PASALLEVLDPEQNSTFRDHYLDVPFDLSEVLFITTANVLDPIPPALRDRMEVLEIPG
                     YTEEEKLSISRDHLAARQIKNHGLTPEQLTITDEAFRSVIRGYTREAGVRNLDRQIGA
                     LCRKAARRRAEGDEKPLTITPAVVEDMLGAPIFLDEEMTERTKEPGVAIGLAWTPAGG
                     DVLFIEASRMAGSGSLTLTGQLGDVMKESARAALSWFRAHAAAFGADPDFFKNAEIHL
                     HVPSGAIPKDGPSAGVTMATALASELTRRPVRGDIAMTGEITLSGRVLPVGGIKEKVL
                     AARRVGIREVILPRQNEKNVNEDLTEELRKDLTVHYVTSVDEVLLLALQPSAAATTAA
                     TASRKTARRAQAPLQ"
     gene            1787..3415
                     /locus_tag="VFN38_03590"
     CDS             1787..3415
                     /locus_tag="VFN38_03590"
                     /inference="COORDINATES: protein motif:HMM:NF015094.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AarF/UbiB family protein"
                     /protein_id="HET9010868.1"
                     /translation="MELAQRLSRYTEFATFVAKYSRSDVLADTHGNAAATGDADELVC
                     DVERLGPTFVKLGQLLSTRADLLKPAYAEALARLQDDVAPFPFDEVVRIVEGELQVRL
                     SKAFTSFDEAPIAAASLGQVHRAVLRDGRQVAVKVQRPGVREQVAQDLETLGDVASLL
                     ERFSSVTRSVDVQALLEQFRMTILAELDYRQEAHNMSVLARHLRDVPEVLVPLPVEDY
                     TTGRVLTMDYVRGTKITAVSPVEWTEVDGRALAEALFRAYLQQILVDGFFHADPHPGN
                     VLLTADHRLGLVDVGMIGRLSTAVQERLYRLLLAIADGDDAEAALVVVALGERLDGFD
                     EASMRRSVTALVSQRDHRADGLNVGRVMLDLARTAHRCGLRMPAELPLLGKTLLNLHD
                     IGRVLDPTFDMERALRRHATALMRRRMKKNARPTHWLPALLGLRELALRLPERANRIL
                     DALAANDVRLKVEVIDHGSIIDGLQKVANRIALGAVLAALIIGAAMLMQVRTSFTILG
                     YPGFAMLLFLAAVAGGVWLAWTILSDDVKKPVRR"
BASE COUNT          567 a         1153 c         1182 g          524 t
ORIGIN      
        1 gcagtcggaa gtcggcaaga accagcgcga gtacttcctg cgcgagcagc tcaaggccat
       61 ccagaaggag ctcggcgaag gcgacgacca gaccaaggac gtcgaggagc tgaaggagaa
      121 gctcgaggcg gccggcctgc ccgaagtggt gatgaaggag gcgatgcgcg agctcgatcg
      181 cctgtccaag atgcccgccg ccgcggcgga atacaccgtg tcgcgcacgt atctcgactg
      241 gatcgccatg ctgccgtggc agaagcggtc ggaagagacg atcgatctca agcacaccaa
      301 gaaggtgctc gacgacgagc actcgggcct cgagaaggcg aaggaccgca tcctcgagtt
      361 cctggcggtt cgcaagctga atccggagtt gaagagcccc atcctgtgct tcgccggacc
      421 gcccggcgtg ggcaagacct cgctggcgcg ctcgatcgcg cagtcgctcg ggcgcaactt
      481 cgtgcgcgtg tcgctcggcg gcatgcgcga cgaggcggag attcgcgggc accgccgcac
      541 ctacatcggt gcgctgcccg gccagatcat ccaggggctg cgccgcgccg aggcgcgcaa
      601 cccggtgttc atcctcgacg aaatcgacaa gctcggaaac gacttccgcg gcgacccggc
      661 gtcggcgctg ctcgaagtgc tcgaccccga gcagaactcg acgttccgcg atcactatct
      721 cgacgtgccg ttcgatctct ccgaggtcct gttcatcacc acggccaacg tgctggaccc
      781 gattccgccg gcgctgcgcg accgcatgga agtgctcgag atccccggct acaccgagga
      841 agagaagctc tcgatttcgc gcgatcacct ggccgcgcgg cagatcaaga accacggcct
      901 cacgcccgag cagctgacga tcaccgacga ggcgttccgc tcggtaatcc gcggctacac
      961 gcgcgaagcg ggcgtgcgca acctcgatcg ccagatcggc gccctgtgcc gcaaagcggc
     1021 gcgccgccgc gccgaaggcg acgagaagcc gctcaccatc acgcccgcgg ttgtcgaaga
     1081 catgctgggc gcgccgatct tcctcgacga ggagatgacc gagcgcacca aggagccggg
     1141 cgtggccatc ggcctggcct ggacgccggc gggcggcgac gtgctcttca tcgaggcgtc
     1201 acgcatggcg ggcagcgggt cgctgaccct caccggccag ctcggcgacg tgatgaagga
     1261 gtcggcgcgg gcggccctct cgtggttccg ggctcacgcc gcggcgtttg gcgccgatcc
     1321 cgacttcttc aagaacgccg agatccacct gcacgtgccg tccggcgcga ttccgaagga
     1381 cggtccctcg gccggtgtca cgatggccac ggcgctggcg tcggagctca cgcggcgacc
     1441 ggtgcgcggc gacatcgcga tgaccggcga gatcacgctc tcgggccgcg tgctgccggt
     1501 cggcggcatc aaggaaaagg tgctggccgc gcggcgcgtc ggcatccgcg aggtcattct
     1561 gccgcggcag aacgagaaga acgtcaacga ggatctcacc gaggagctgc gcaaggacct
     1621 gaccgtccac tacgtgacga gcgtggacga ggtgctgctg ctcgcgctgc agccgagcgc
     1681 cgccgctacg acggcggcga cggcaagccg caagaccgcg cgtcgcgccc aggcgcctct
     1741 gcagtagggg ccgccatcag gcacatggct tgctcgagct ccgttcatgg agctcgcgca
     1801 gcgcctgagc cgctataccg agttcgcgac gttcgtcgcg aagtacagcc gctcggacgt
     1861 tcttgctgac acacatggaa atgccgccgc caccggcgac gccgatgagc ttgtgtgcga
     1921 cgtcgaacgc ctcggtccga cgttcgtcaa actcggtcag ctcctctcca cccgcgccga
     1981 tctgctgaag ccggcgtacg ccgaagcgct ggcgcggctc caagacgatg tggcgccatt
     2041 cccgttcgac gaggtggtcc gcatcgtcga aggggaactg caggtccggc tctccaaagc
     2101 gttcacgtcc tttgacgaag cgccgatcgc cgcggcgtcg cttgggcagg tccatcgcgc
     2161 cgtgttgcga gacggccgcc aggtcgccgt gaaggtgcag cggcctggcg tgcgcgagca
     2221 ggtggcgcag gacctcgaga cgctcggtga cgtcgcctcg ctgctcgagc ggttcagcag
     2281 cgtgacgcgc agcgtggacg tgcaggcgct gctcgagcag ttccggatga ccatcctggc
     2341 ggagctcgac tatcggcagg aagcgcacaa catgtcggtg ctcgcgcgcc atctgcgcga
     2401 cgtgcccgag gtgctcgttc cgctgccggt cgaggactac accaccggcc gtgtcctgac
     2461 gatggactac gtgcgtggca ccaagatcac ggcggtcagc cccgtggaat ggaccgaggt
     2521 ggacggccgc gccctggccg aggcgctctt ccgcgcctat ctccaacaga tcctggtcga
     2581 cggcttcttc cacgcggatc cacatcccgg caatgtgctg ctgacggcgg atcaccgcct
     2641 tggcctggtg gacgtgggga tgatcgggcg gctttcgacg gcggtgcagg aacggctgta
     2701 ccgtctcctc ctcgcaatcg ccgacggcga cgatgccgag gcggccctcg tcgtcgtggc
     2761 gctcggcgag aggctcgacg gattcgacga ggcgtcgatg cggaggagcg tgacggcact
     2821 cgtctcgcag cgtgatcacc gggcggatgg gctgaacgtc ggccgcgtga tgctggacct
     2881 ggcgcgcacc gcccaccggt gtggactccg gatgccggcg gagctgccgc tgctcggcaa
     2941 gacgctgttg aaccttcacg acatcgggcg cgtgctcgat cccacgttcg acatggagag
     3001 ggcgctgcgc cgccacgcca ccgcgctgat gcgccgccgc atgaagaaga acgccaggcc
     3061 cacgcactgg ctgccggcgc tgctcggcct gcgggagctg gcgctgcggc tgcccgagcg
     3121 ggccaaccgc attctcgacg cgctcgccgc caacgacgtg cggctcaagg tcgaggtgat
     3181 cgaccatggc tcgatcatcg acgggctgca gaaggtggcc aaccgcatcg cactcggcgc
     3241 cgtgctggcc gcgctgatca tcggcgcggc catgctgatg caggtgcgta cgagcttcac
     3301 gatcctgggt tatccaggct ttgcgatgct gctgttcctc gctgccgtgg ccggcggcgt
     3361 gtggctggcg tggacgattc tgtccgacga cgtcaagaag ccggttcgcc gctgaggcgt
     3421 ggcgcg
//
LOCUS       DASSYW010000232         2383 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_147575, whole genome shotgun sequence.
ACCESSION   DASSYW010000232 DASSYW010000000
VERSION     DASSYW010000232.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2383)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2383)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2383
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_147575"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(18..881)
                     /gene="hisG"
                     /locus_tag="VFN38_03595"
     CDS             complement(18..881)
                     /gene="hisG"
                     /locus_tag="VFN38_03595"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003879 - ATP phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HET9010869.1"
                     /translation="MLRIALPNKGRLSEEARELFTDAGLEIRAAGPRALTASLGGEFQ
                     ALFVRAQDIPEFVADGAADAGVTGFDLVSESGRMVDELADLEFGRCRLAVAARDESGI
                     ATLDDIGAGARVATVFPRITERFFRERGQRVEVVPVSGAAEIAPHIGIADIIVDLVST
                     GSTLRVNGLREVATVLESSTRLIASPSVRTDAARARALDELVAALGSVIAARGKRYVM
                     ANVPRARLDEVKRVVPGLNGPTVIDIMNGGAFVAVHAVVGAATIYRTIADLKALGAEG
                     ILVTRIERLMA"
     gene            1294..1818
                     /locus_tag="VFN38_03600"
     CDS             1294..1818
                     /locus_tag="VFN38_03600"
                     /inference="COORDINATES: protein motif:HMM:NF012355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /protein_id="HET9010870.1"
                     /translation="MRFYGIALLAGAAILGACGGETKSATDTAAANAAAASTTTPATA
                     TPSTGAAPAAGAVAAVPATGTTHEVKMIGDATGYRFDPVNITVKSGDAVKFIMVSGGP
                     HNVAFQTIADAAVKAQMDANMPGQHMGEASGPMIMQPNESYTISLGKIPAGKYDYVCI
                     PHLAMNMKGTITVQ"
     gene            2103..>2383
                     /locus_tag="VFN38_03605"
     CDS             2103..>2383
                     /locus_tag="VFN38_03605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010871.1"
                     /translation="MFVGALVLLVLAPRDARRASQQIVPLSTRWRDTVPLLRSFETAT
                     RRLAVADSTLAARRALAERQPYMRPPDTLSFAARVVRDSLAARSAELTRV"
BASE COUNT          396 a          808 c          837 g          342 t
ORIGIN      
        1 cggcgcgttg gttgccgtca tgccatcaac ctctcgatgc gcgtgaccag gattccctcg
       61 gcgccgaggg ccttgaggtc ggcgatggtg cggtagatgg tggcggcgcc caccacggcg
      121 tgcacggcga cgaacgctcc gccgttcatg atgtcgatca cggtggggcc gttgaggccg
      181 gggacgaccc gcttcacctc gtccagccgc gcacgcggca cgttggccat cacgtagcgc
      241 ttgccgcgcg cggcgatcac gctgcccagc gcggcgacga gctcgtcgag cgcgcgcgcg
      301 cgtgccgcat cggtccgcac ggacggcgac gcgatgagcc gggtggagga ctcgagcacc
      361 gtcgccactt cgcgcagtcc gttcacgcga agggtggacc ccgtggagac gaggtcgacg
      421 atgatgtcgg cgatgccgat gtgcggcgcg atctccgccg cgccggacac gggaaccacc
      481 tccacccgct ggccgcgctc gcggaagaag cgctcggtga tgcgcggaaa caccgtggcg
      541 acgcgtgctc ctgcgccgat gtcgtcgagg gtggcgatgc cgctctcgtc ccgcgccgcg
      601 acggcgaggc ggcagcggcc gaactcgaga tcggcgagct catcgaccat acggccggat
      661 tcgctcacga ggtcgaatcc ggtgacgccg gcatcggcgg cgccgtcggc gacgaactcg
      721 gggatgtcct gcgcgcggac gaacagtgcc tggaactcgc cgccgaggga cgccgtgagc
      781 gcgcgcgggc cggccgcccg gatctcgagc cccgcgtcgg tgaacagctc gcgggcctcc
      841 tcggagagac ggcccttgtt gggaagtgcg atgcgaagca tggagtaggg ccgcgaggcc
      901 tcgagagaga cttgctggag aactggcgcc gaccggcaac aaaaaagccc gtccgaagga
      961 cgggcccaga gccgaccggc agttgcgccg ggatgaacgc ggagtggagc ggtccgctac
     1021 ccgtgcacgt gcgagtcgcc ccagcccgtc gggccgtggt ggcgatgcac gagatggtga
     1081 ggcgcgcgaa cgatgctcat gggacggaac gtaactgggg aggcgagtcc cggtcaacgc
     1141 cgcggcgcga cctgtgcatc ggccgggcag gacgtgacgg cggtgcagcg tgaatcgaat
     1201 tgcgccgtcg cgtgcttgtg aataaattca caatacccga cggggccccg tcgggcagta
     1261 ctcaacgatc aaagtttgtg gaggccttca gaaatgcggt tctacggtat tgcactcctc
     1321 gccggcgcgg cgatcctcgg cgcctgcggc ggcgagacca agtctgcgac ggacaccgcc
     1381 gcggccaatg cggctgcggc gagcacgacc acgccggcca cggcgacgcc cagcacgggc
     1441 gcggctccgg cggcgggcgc agtggcggcc gttccggcca ccggcaccac ccatgaagtg
     1501 aagatgatcg gcgatgcgac gggctatcgg ttcgaccccg tcaacatcac cgtgaagtcc
     1561 ggcgacgcgg tcaagttcat catggtctcc ggcggcccgc acaacgtcgc cttccagacc
     1621 atcgccgatg cggccgtgaa ggcccagatg gacgcgaaca tgcccggcca gcacatgggc
     1681 gaggcgtccg gccccatgat catgcagccc aacgagagct acacgatctc gctcggcaag
     1741 atcccggcgg gcaagtacga ctacgtctgc atcccgcacc tcgcgatgaa catgaagggc
     1801 acgatcacgg ttcagtagtt cgcctcttgc cggcgcgaat cgcgccgagc gagcagcgag
     1861 tatcatgaca gggcggagac gcgtgagcgt ctccgccctc tgtcatccaa ggacatccgc
     1921 gtcgagcgct tgcgcgctga gccggccact ccgattatcg cgaacgcatg gtcgatacga
     1981 tcaccggagc agtcccgcgc tacacgcgcc gccggcgcgc cgagatgcgc gccgcctgga
     2041 tcgcggggcg aacgcgaaac acgctccgcc gtccggtgcg actggccgcg atctcgggga
     2101 cggtgttcgt cggcgcgctc gtgttgctcg tgctcgcacc gcgtgatgcc aggcgtgcgt
     2161 cgcaacagat cgtgccactc tcgacgcgtt ggcgcgacac ggtcccgttg cttcgtagct
     2221 tcgagacagc gacgcgcaga ctcgcggtcg ctgattcgac gctcgccgca cgacgagcgc
     2281 tcgcagagcg tcagccgtac atgcgaccgc cggacaccct gtcgttcgcc gcgcgtgtcg
     2341 ttcgcgactc actcgccgca cggagtgccg agctcacccg ggt
//
LOCUS       DASSYW010000233         2016 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_171755, whole genome shotgun sequence.
ACCESSION   DASSYW010000233 DASSYW010000000
VERSION     DASSYW010000233.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2016)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2016)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2016
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_171755"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..793
                     /locus_tag="VFN38_03610"
     CDS             <1..793
                     /locus_tag="VFN38_03610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010872.1"
                     /translation="AFVYVVTFNLYGEMVPSSMSVVTADEMVEVARVTTCTMPHGSRI
                     NPQGTKQYSGCMMDDLAIEIDTRGFAVARHFLLTKGKEQGMPGAPAQRVASADHAAHD
                     MGGHGMATPKPGDVSCSPTWVQPSSDGGKIFVACNKSSDIVEIDVASWTMTRRFPAGN
                     GVYNLAVTRDGRYLVGTNKRDKSTSVIDIASGREAARIPTTRRVASGVAISSDDRYAF
                     VTQEGVGSEPGAVDVIDLRALRKVATIDIGQQAGGIDFWKAVPSR"
     gene            793..1524
                     /locus_tag="VFN38_03615"
     CDS             793..1524
                     /locus_tag="VFN38_03615"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane glutamic
                     endopeptidase"
                     /protein_id="HET9010873.1"
                     /translation="MPGVASYWEESRSHRYSLVFALPLLLAYELLEALAPVRVKGGVV
                     RNGADVILTGGFTALFGPRGPLVLMGLVIGGALVLIWRDRRPGPLKPHYFGLMLAESA
                     VLALLFGVVVGVATVQLLGPLRSLAAGAAGVGGSALERLTLSLGAGLYEELLFRVVLV
                     ALISNGLRLVGFSRITSGVTAVIAGALLFSAFHYVGPLGDELRLDSFVFRALAGVAFS
                     ALYLTRGFGITAWTHALYDVAVLLG"
     gene            complement(1526..>2016)
                     /locus_tag="VFN38_03620"
     CDS             complement(1526..>2016)
                     /locus_tag="VFN38_03620"
                     /inference="COORDINATES: protein motif:HMM:NF013718.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HET9010874.1"
                     /translation="PVADGGLHVAEAVAAGTIIGSFLKSTTGRARPRAANGDPYDFRF
                     GQGYTAGEYRSFPSLHEIGSFSAAAALTAEVARHAPAAGRVVGVLAYGTAGAVGVSRM
                     YSAEHWASDVVLGSAIGIFLGTRVVAHAHGGPPSRADRVLLGGLAGGPNGTRITLFDR
                     DF"
BASE COUNT          263 a          684 c          752 g          317 t
ORIGIN      
        1 cgcgttcgtg tacgtggtga ccttcaatct gtacggcgag atggtgccgt cgtcgatgtc
       61 ggtcgtgacc gccgacgaga tggtggaggt ggcgcgtgtc accacctgca ccatgccgca
      121 cgggtcccgc atcaatccgc agggcacgaa gcagtactcc ggctgcatga tggacgacct
      181 ggcgatcgag atcgacaccc gaggcttcgc cgtggcgcgt catttcctcc tcacgaaggg
      241 gaaggagcag ggcatgcccg gggcgccggc gcagcgcgtc gcgtctgccg atcacgctgc
      301 gcacgacatg ggcggacacg gcatggccac gcccaagccg ggcgacgtga gctgctcccc
      361 gacgtgggtg cagccgtcgt cggatggggg gaagatcttc gtcgcctgca acaagagcag
      421 cgacatcgtg gagatcgacg tcgcgagctg gacgatgacg cgccgctttc cggccggcaa
      481 cggtgtctac aacctcgccg tcacgcggga cggccggtat ctcgtcggga ccaacaagcg
      541 cgacaagtcg acgtcggtga tcgacatcgc ctcgggccgc gaggcggcgc gcatcccgac
      601 gacgcggcgc gtggcgtcgg gcgtcgcgat ctcgtccgac gaccggtatg cgttcgtcac
      661 gcaggaaggg gtagggtccg agcccggcgc ggtggacgtg atcgacctgc gcgcgctgcg
      721 caaggtggcg acgatcgaca tcgggcagca ggcgggcggg atcgacttct ggaaggccgt
      781 cccatcccgg tgatgccggg ggtggcgagc tactgggagg agagccggtc gcaccggtac
      841 agcctcgtct tcgcgctgcc gctgctgctc gcgtacgagc tgctggaggc gctggcgccc
      901 gtgcgggtga aggggggcgt ggtgcgcaac ggcgccgacg tgatcctcac cggcggattc
      961 accgcgctgt tcggcccgcg cggcccgctg gtgctcatgg ggctggtgat cgggggcgcg
     1021 ctcgtgctga tctggcgcga ccggcgtccc ggcccgctga agccgcacta cttcgggctg
     1081 atgctcgcgg agtcggcggt cctcgcgctc ctgttcggcg tggtggtggg cgtcgcgacg
     1141 gtgcagctcc tcggtcccct gcgctcgctc gccgcgggag ccgccggcgt cggcggctcg
     1201 gcgctcgagc ggctgaccct ctcgctcggc gccggcctct acgaggagct cctctttcgc
     1261 gtcgtgctcg tcgcgctgat ctcgaacggc ctgcggctcg tcggcttctc gcggatcacg
     1321 tcgggggtga ccgcggtgat cgcgggcgcg ctcctgttct ccgccttcca ctacgtgggc
     1381 ccgctgggcg acgagctgcg ccttgattcg ttcgtgttcc gcgcgctggc gggcgtggcg
     1441 ttcagcgcgc tgtacctcac gcggggcttc gggatcaccg cgtggaccca cgcgctctac
     1501 gacgtggccg tgctgctcgg ctgactcaga agtcgcggtc gaacaaggtg atccgcgtgc
     1561 cgttcggacc accggcgagg ccgccgagca ggacgcggtc cgccctggag ggcggaccgc
     1621 catgggcgtg ggccacgacg cgcgtgccga ggaagatgcc gatggcgctg ccgaggacga
     1681 cgtcgctggc ccagtgctcc gcgctgtaca tgcgcgacac gcccacggcg ccagcggtgc
     1741 cataggcgag cacgcccacc acgcgccccg cggccggcgc atggcgcgcg acttcggcgg
     1801 tgagcgcggc cgccgcgctg aagcttccga tctcgtgcag cgaggggaag gagcggtact
     1861 cgcccgccgt atacccctgg ccgaaccgga agtcgtacgg gtcgccgttg gcggcacgag
     1921 gcctcgcgcg gcccgtggtg ctcttgagga acgagccgat gattgtgccg gcggccaccg
     1981 cctcggccac gtgcagtccc ccgtcggcca ccggcg
//
LOCUS       DASSYW010000234         2413 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1460148, whole genome shotgun sequence.
ACCESSION   DASSYW010000234 DASSYW010000000
VERSION     DASSYW010000234.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2413)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2413)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2413
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1460148"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..289)
                     /locus_tag="VFN38_03625"
     CDS             complement(<1..289)
                     /locus_tag="VFN38_03625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010875.1"
                     /translation="MTEPSSIRAFLLCALLLPGLGCARSAALETVPEPSPAALERGIA
                     TADSLIQDAVGKQFPGAVFLVARDGKVLHERAFGWAQLYDSAMRRLADPPVM"
     gene            506..763
                     /locus_tag="VFN38_03630"
     CDS             506..763
                     /locus_tag="VFN38_03630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010876.1"
                     /translation="METPASRAHLMDVSYRNGWLVFEKEDGTERRRLNQVPEDWTHLA
                     PEHLARLCALAVVAPPLRSTSSVTTVRMPIVLRPSDSRSDR"
     gene            842..1795
                     /locus_tag="VFN38_03635"
     CDS             842..1795
                     /locus_tag="VFN38_03635"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HET9010877.1"
                     /translation="MIQARPFFDRLSALADPTRSRLLLLLDRHDLTVGELCSALQLPQ
                     STVSRHLKTLADEGWVTARAEGTSRHYAMPGAALDAGARRLWHLVRDQVGATPSARHD
                     LARAEQVLAERRSTSQAFFSSRAGQWDKVRAELYGSRADLAPFAALLDPAWVVGDLGC
                     GTRQTTAALAPFVARVVAVDDSSAMLAAARRRLSERHNVELRNGRLESLPVGDGELDA
                     AILSLVLHFVVDPAAVLAEVARTLRPGGRLLVVDMLPHEREEYRTTMGHLWLGFDAEQ
                     VTTWLQHAGLADVRVVPLPPDPQAKGPGLFTARAVRRAATT"
     gene            1896..>2413
                     /locus_tag="VFN38_03640"
     CDS             1896..>2413
                     /locus_tag="VFN38_03640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylhomocysteinase"
                     /protein_id="HET9010878.1"
                     /translation="MATTQRPVSTSALDRPAFKVADLSLAEFGRKELRLAEQEMPGLM
                     ALRNEYKGKKPLAGAKIMGSLHMTVQTAVLIETLTELGADVRWVSCNIFSTQDHAAAA
                     VAVGKHGTVDNPKGIAVFAWKGETLEEYWWCTEQALMWPDGTGPNLILDDGGDATMLV
                     HKGAEYEKSGVIP"
BASE COUNT          366 a          859 c          827 g          361 t
ORIGIN      
        1 gcatcaccgg cgggtcggcc agccggcgca tcgcggagtc gtacagctgc gcccatccga
       61 acgcgcgttc gtggagcacc tttccatccc gggcgaccag gaacaccgcg cccgggaact
      121 gcttccctac cgcatcctgg atcagcgagt cggccgtggc gataccccgc tccagcgcgg
      181 ccggcgacgg ctccggaacg gtctcgaggg ccgcagagcg ggcacagccg agccccggca
      241 ggaggagggc gcagaggagg aacgctcgga tggagctcgg ctcggtcatt ggggcgtaag
      301 gaatcgggtg aaggagtcgc ggaacatgcc ggtcctcccc gggcccggca accatcgtcg
      361 attgcggaat gtgacttgcc ccgatgacgg tagatgtccc gcggtagcga gctggacgcg
      421 cgggcgtgat gcttcagcag ggagatgcac cgtgggattg ttgacctttc gtgatgcctc
      481 cggagtaccc tggcgggtgt ggcacgtgga gacgcccgcc tcgcgcgctc acctgatgga
      541 cgtgagctat cgcaacggct ggctcgtgtt cgagaaggag gatggcaccg agcgccggcg
      601 gctcaaccag gtgccggagg actggacgca tctcgcgccg gaacacctcg cgcggctgtg
      661 cgcgctggcg gtggtcgcgc ctcccctgag atcgacatcg agcgtgacga cggtgcggat
      721 gccgatcgtc ctccgtccct ccgactcccg atccgatcgc tgaacccgtt cggacgcggc
      781 acgtagcgtc gaccacttga cgccgggcgg gaagtaagca acctttcatc cggatatacg
      841 gatgatacaa gcccgccctt tcttcgaccg cctctcggcg ctcgccgacc ccacccggag
      901 ccggctcctg ctgctgctcg accgtcacga cctgacggtg ggggagctgt gcagcgcgct
      961 ccagctcccg cagagcaccg tgagccggca tctcaagacg ctggccgacg aagggtgggt
     1021 gaccgcgcgg gccgagggga cgagccgcca ctacgcgatg cccggagctg cgctcgacgc
     1081 gggtgcgcgc cgtctctggc atctcgtccg cgaccaggtc ggcgccacgc cctcggcgcg
     1141 ccacgacctc gcgcgcgccg agcaggtgct ggccgagcgc cgctccacct cgcaggcctt
     1201 cttctcgtcg cgcgccggcc agtgggacaa ggtgcgggcg gagctgtacg gcagccgcgc
     1261 cgacctcgcg cccttcgccg cgctgctcga tcccgcgtgg gtcgtgggag acctcggctg
     1321 cggcacccgc cagacgaccg ccgcgctggc gcccttcgtc gctcgcgttg tggccgtgga
     1381 cgactcgagc gcgatgctcg ccgcggcacg acgccggctc tccgagcgcc acaacgtgga
     1441 gctgcggaat ggccgtctcg agtcgctgcc cgtgggtgac ggcgagctgg acgcggcgat
     1501 tctctcgctc gtgctgcact tcgtcgtgga tcccgcggcc gtgctcgccg aggtcgcacg
     1561 taccctgcgc ccgggcggcc gcctgctcgt ggtggacatg ctgccccacg agcgcgagga
     1621 gtatcgcacc acgatgggac atctctggct cggcttcgac gccgagcagg tcaccacctg
     1681 gcttcagcac gccggcctcg ccgacgtgcg cgtcgtgccc ctaccccccg atccgcaggc
     1741 gaagggaccg gggctgttca ccgcgagagc ggtgaggcgg gcggcgacga cgtaatcctg
     1801 ccgcagtccc gacgcagtga ccgttcaccg ctcaccgttc accgttcgtt attcgctgtt
     1861 caccgtttcg cgtcaccgtt caccgcgcac acaccatggc caccactcag cgtcccgtct
     1921 ccacgtccgc cctcgaccgc cctgccttca aggtggccga tctctccctc gccgagttcg
     1981 ggcgcaagga gctccgcctc gccgagcagg agatgccggg gctgatggcg ctccgcaacg
     2041 agtacaaggg gaagaagccc ctcgccggcg cgaagatcat gggctcgctg cacatgaccg
     2101 tgcagacggc cgtcctcatc gagacgctca ccgagctcgg cgccgacgtg cgctgggtga
     2161 gctgcaacat cttcagcacc caggaccacg ccgccgcggc cgtggccgtg ggcaagcacg
     2221 gcacggtgga caacccgaag gggatcgccg tgttcgcgtg gaagggcgaa acgctcgagg
     2281 agtactggtg gtgcaccgag caggcgctga tgtggcccga cggcaccggc ccgaacctca
     2341 tcctcgacga cggcggcgac gcgacgatgc tcgtgcacaa gggcgccgag tacgagaagt
     2401 ccggcgtcat ccc
//
LOCUS       DASSYW010000235         3742 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1625972, whole genome shotgun sequence.
ACCESSION   DASSYW010000235 DASSYW010000000
VERSION     DASSYW010000235.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3742)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3742)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3742
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1625972"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..893)
                     /locus_tag="VFN38_03645"
     CDS             complement(<1..893)
                     /locus_tag="VFN38_03645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046912 - acyltransferase activity, acyl
                     groups converted into alkyl on transfer [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citrate/2-methylcitrate synthase"
                     /protein_id="HET9010879.1"
                     /translation="MSKAEPSAAGASSGTLEIKDTRTGTGYSVPILPPGTEGDTAIRA
                     MDLRPIKQRPDEFGLMTYDPAFMNTASCKSAITFIDGDKGILRYRGYPIEQLAEKASF
                     LEVAWLLRHGELPTQAEYNDWTHQITYHTYVHENIKTFLQGFRYDAHPMSMLCSSVAA
                     LSSFYPSAKNIQDPEERHISIVRLLAKLPTLAAFCFRHVKGLPFIYPDNDLGYVENFL
                     SMVARMTQPKYQGNPVFVKALEVLFILHADHEQNCSTNAVRAVGSSHVDPFSAVAAGI
                     AALYGPLHGGANEAVLHMIKE"
     gene            1091..1894
                     /locus_tag="VFN38_03650"
     CDS             1091..1894
                     /locus_tag="VFN38_03650"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HET9010880.1"
                     /translation="MFVADLAPLPLGRLVVAAVAALLAGVMNSVAGGGTLLTFPALVA
                     AGLSPLQANATSTVALLPAALTSMLGYRGELAGARRWALALALPSLVGGGLGAWLLLS
                     TSNATFERVVPWLVLGATALFLLQRPLLRWVRGHEAALPAHRDGTSASPAMSLLWWQL
                     LVGVYGGYFGAGVGILMLAALGFMGLTNIHRMNGLKNWGGFCMNAVAAVTFALSGIVD
                     WPVALSMAVGSMAGGYLGARAAQRAPQGMVRGAVALIGIGSGIWLLLRR"
     gene            complement(1903..2388)
                     /locus_tag="VFN38_03655"
     CDS             complement(1903..2388)
                     /locus_tag="VFN38_03655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EVE domain-containing protein"
                     /protein_id="HET9010881.1"
                     /translation="MTTATARRYWLVKSEPDVFSFADLVARPNSTTGWDGVRNYQARN
                     FMRDGMKRGDRVFFYHSSTEPAAIVGVAEVAREAYPDPTAFDASDSHHDPRSRTDAPT
                     WVMVDLRAVEPLARPVTLTELRGVKGLEKMVLLQKGSRLSVQPVTEQEWNIIYRIGMK
                     G"
     gene            2474..3079
                     /locus_tag="VFN38_03660"
     CDS             2474..3079
                     /locus_tag="VFN38_03660"
                     /inference="COORDINATES: protein motif:HMM:NF014389.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggT family protein"
                     /protein_id="HET9010882.1"
                     /translation="MNEVLVALALVTDTMRTLLLVGGIVFAGVAAMDWAVRTRRINPF
                     NGVARFMRARVEPRFAGVERQVARAGGHPASTPWWALVAYVVCALLLLALLDLLSTML
                     GEAAAAVSLGGAGLLMLAVRWTFSFLLLALLVRVLASWLPRLASTGWMSWSFGATEWM
                     LRPLRRVIPTIGVMDITPIVAYFALQILQRVVETVLFSQLR"
     gene            3094..3381
                     /locus_tag="VFN38_03665"
     CDS             3094..3381
                     /locus_tag="VFN38_03665"
                     /inference="COORDINATES: protein motif:HMM:TIGR00251.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF167 domain-containing protein"
                     /protein_id="HET9010883.1"
                     /translation="MERRGASVRVQVRVQPRASRSEVVGVHGEALKVRLQAPPVDGAA
                     NDALVHLLADRLGVPARAVRVVSGGTSRTKLVEVDGTTESAVRGLAETPTK"
     gene            3401..>3742
                     /locus_tag="VFN38_03670"
     CDS             3401..>3742
                     /locus_tag="VFN38_03670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010884.1"
                     /translation="MTHVMLVGNDAALLEGLSQALAALGHTSRVVRTLMEARQSSGSQ
                     PPLVLIVDRALASEGGADLLTAPLASGGARLLYRTTSSPLAPLLPALQRAVLADLTLP
                     LERHRLVAPVQS"
BASE COUNT          470 a         1293 c         1314 g          665 t
ORIGIN      
        1 atctccttga tcatgtgcag caccgcctcg ttggcgccgc cgtgcagcgg gccgtacagc
       61 gcggcgatcc ccgcggccac ggccgagaag ggatccacgt gcgagctgcc gacggcacgc
      121 acggcgttcg tcgagcagtt ctgctcgtgg tcggcgtgca ggatgaacag gacctcgagc
      181 gccttcacga acaccgggtt gccctggtac ttgggctgcg tcatccgggc caccatcgac
      241 aggaagttct cgacgtagcc gaggtcgttg tcggggtaga tgaacggcag tcccttcaca
      301 tggcggaagc agaacgccgc cagcgtgggg agcttggcga ggaggcgcac gatgctgatg
      361 tggcgctcct cgggatcctg gatgttcttc gccgacggat agaagctcga cagggccgcc
      421 accgagctgc acagcatcga catcggatgc gcgtcgtagc ggaagccctg gaggaaggtc
      481 ttgatgttct cgtggacgta cgtgtggtac gtgatctggt gcgtccagtc gttgtactcc
      541 gcctgcgtcg gcagctcgcc gtgccgcagc agccacgcga cctccaggaa gctcgccttc
      601 tcggccagct gctcgatcgg gtagccgcgg tagcgcagga tccccttgtc gccgtcgatg
      661 aaggtgatcg cgctcttgca cgacgccgtg ttcatgaacg cggggtcgta cgtcatcagc
      721 ccgaactcgt cggggcgctg cttgatcggg cgcaggtcca tcgcgcgaat cgccgtgtcc
      781 ccttcggtgc ccggcggcag aatcggcacg ctgtagcccg tgccggtacg tgtatccttg
      841 atctcgagcg tcccggagga cgcgcccgcg gcgctcggct cggccttgct catgtcaacg
      901 ttcccccatg gagatccatg cacgtcggcg gagctggtgc ccggccgagc ctgaaatgta
      961 ttgacgggtg atgcgtcgcg acattggtgc gccggggcct ccggagcagg ggaactcccg
     1021 ctatcgttcg cccacgcccg ccctgccgtc gaggctgcgg caagagcccc caccccgagc
     1081 ctcgccctcc gtgttcgtcg ccgacctcgc cccgcttccg ctcggccgtc tggtcgtggc
     1141 cgccgtggcc gcactgctgg cgggcgtgat gaactcggtg gcgggcggcg gaaccctgct
     1201 caccttcccc gccctcgtcg cggcggggct ctccccgctg caggccaacg ccacgagcac
     1261 ggtggcgctg ctgcccgcgg cgctcacgtc gatgctcggc tatcgcggcg agctggctgg
     1321 agctcggcgc tgggcgctcg ccctcgcgct gccgagcctc gtcggcggag ggctcggcgc
     1381 ctggctgctg ctctccacct cgaacgccac cttcgagcgc gtcgtcccct ggctggtgct
     1441 cggcgccacg gcgctctttc tcctccagcg cccgctgctc cgctgggtgc gcggccacga
     1501 ggcggcgctg cccgcgcatc gcgacggaac gtcggcgtcg ccggccatgt cgctgctctg
     1561 gtggcagctg ctggtcggcg tctacggcgg ctatttcggc gccggcgtcg gcatcctcat
     1621 gctggcggcg ctcgggttca tgggcctcac gaacattcac cgcatgaacg gcctcaagaa
     1681 ctggggcggc ttctgcatga acgccgtcgc cgcggtcacc ttcgcgctga gcggcatcgt
     1741 ggactggccg gtcgcgttga gcatggccgt gggctcgatg gccggcggat atctcggcgc
     1801 gcgcgcggca cagcgtgcgc cgcagggcat ggtgcggggg gccgttgccc tcatcgggat
     1861 cggaagcggg atctggctgc tgctccgccg ataggactgc cgctagccct tcattccgat
     1921 gcggtagatg atgttccact cctgctccgt cacgggctgc acgctgaggc ggctcccctt
     1981 ctggaggagg accatcttct ccagtccctt cacgccgcgc agctcggtca gtgtgacggg
     2041 gcgggcgagc ggctcgacgg cacgcaggtc caccatcacc cacgtcggcg cgtcggttcg
     2101 gctcctgggg tcgtgatgcg agtcgctcgc gtcgaacgcc gtgggatccg ggtaggcctc
     2161 gcgcgcgact tccgccacgc ccacgatggc cgccggctcg gtgctcgagt ggtagaagaa
     2221 cacgcggtct ccgcgcttca tcccgtcgcg catgaagttc cgcgcctggt agttgcgcac
     2281 gccgtcccag cccgtcgtcg agttcgggcg ggcgacgagg tcggcgaagg agaagacgtc
     2341 cggctccgac ttcacgagcc agtagcgtcg cgcggtggcg gtggtcatgg atcgcggggt
     2401 gaagggtcgc cggaatgtag ccgggccggg tggccacctt gtaggggagg cgaacgccga
     2461 tcagctttgg cgcatgaacg aagtgctcgt cgccctcgcg ctggtgaccg acaccatgcg
     2521 caccctgctc ctcgtgggcg gcatcgtctt cgccggcgtc gccgccatgg attgggcggt
     2581 gcgcacgcgt cgcatcaatc cgttcaacgg cgtcgcccgc ttcatgcgcg cgcgagtcga
     2641 gccgcgcttc gccggagtgg aacgtcaggt ggcgcgcgcc ggtggccatc cggcctccac
     2701 cccgtggtgg gcgctcgtcg cctacgtcgt gtgcgcactg ctgctgctcg cgctcctcga
     2761 tctgctgtcg acgatgctcg gcgaggccgc cgccgccgtc tcgctgggcg gcgcgggact
     2821 gctgatgctg gcggtgcggt ggaccttctc gttcctgctg ctcgccctgc tcgtgcgcgt
     2881 gctcgcctcg tggctgccgc gcctcgcgtc caccggctgg atgtcgtgga gcttcggggc
     2941 gacggagtgg atgctccgtc cgctgcgccg cgtgattccc acgatcggtg tgatggacat
     3001 cacaccgatc gtggcatact tcgcgcttca gatcctgcag cgcgtagtcg agactgtact
     3061 gttcagccaa ttgcgttgaa gcacgtattg cgcgtggagc gacgtggcgc cagcgtacgc
     3121 gttcaggtgc gcgtgcagcc gcgtgcatca cgcagcgagg tcgtcggcgt gcacggcgag
     3181 gcgctcaagg ttcgcctgca ggcaccgccg gtggacggcg cggcgaacga cgcgctggtg
     3241 cacctgctcg cggatcgact gggcgtcccg gcgcgcgcgg tgcgcgtcgt gtccggtggg
     3301 acgtcgcgca cgaagctggt cgaggtcgac gggacgacgg agtcggccgt tcgcggcctg
     3361 gctgagaccc caacgaagtg acgaaggagc gaagcaaccg atgacgcatg tgatgttggt
     3421 ggggaatgac gcggcactgc tcgagggcct ttcgcaggcg ctcgccgcgc tcgggcacac
     3481 gtcccgggtg gtccggacgc tgatggaggc gcgccagtcg tccggctccc aaccgccgct
     3541 cgtcctcatc gtggatcggg cgctcgccag cgagggcggc gcggacctgc tcaccgcacc
     3601 cctcgcctcc ggcggcgctc ggctgctgta ccgcacgacg tcgtctcccc tcgctccgct
     3661 gctccccgcg ctccagcgcg cggtgctcgc cgatctcacc ctgccgctcg agcgccatcg
     3721 cctcgtcgcc cccgtgcagt cg
//
LOCUS       DASSYW010000236         3573 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_263505, whole genome shotgun sequence.
ACCESSION   DASSYW010000236 DASSYW010000000
VERSION     DASSYW010000236.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3573)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3573)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3573
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_263505"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..679)
                     /locus_tag="VFN38_03675"
     CDS             complement(<1..679)
                     /locus_tag="VFN38_03675"
                     /inference="COORDINATES: protein motif:HMM:NF014476.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010885.1"
                     /translation="MSSSSTQADTLVLTRHDVARLLDMNDCIAAVERAFAQHAAGTSI
                     APGVLATHVPGGGFHVKTAGLAGDAHVFAAKVNANFPENRALRGLPTIQGVIILFDAD
                     TGHPLAVLDSIEITSVRTAAATAVAARHLARADAAVVTICGCGEQGRSQLRALCAVRP
                     IRTAFAFDADAERAAEYAVGMARELGIDVTAIGDLPAATRRSDIVVTCTTARRWFLGR
                     HDVAPGCF"
     gene            complement(679..1188)
                     /locus_tag="VFN38_03680"
     CDS             complement(679..1188)
                     /locus_tag="VFN38_03680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HET9010886.1"
                     /translation="MANTEWWQRGPIEGVPPLLQPVAHILLQVRESVDELVENLTESE
                     WNARPAGVASAAFHVRHITGVVDRLFTYARGEALSEEQFAAIRGEGEPLPLGDVRRVL
                     DALQARVDAAVAELRTIDAATLGDFRPVGRARLPSTVIGCLVHGAEHAMRHVGQLSVT
                     TRVVRSGGA"
     gene            complement(1270..2064)
                     /locus_tag="VFN38_03685"
     CDS             complement(1270..2064)
                     /locus_tag="VFN38_03685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010887.1"
                     /translation="MSSIYMHRIVGQLILGAGVALVMMLLRRLAPVKQFVVTADERER
                     YEDRKGQIILASFAFVTLFTIAFFFCLRALLSLLVRRRSGAVLILEPIPELYWLIALF
                     LAFLAASRPTSWWVRHALRLDSDRVKRYFELRYHFDTSKLGRIFAWTIVSAAVVSFAA
                     GVSKTDQLTTQGIVIGEAFVANPPVRPYNTIRTIRYGEFSFQTRRGTWRQRKWFVVTF
                     DDGTRWGYRTVLWDSQDPMLLRTVLELVSARSGRPIEQVEPFQVSR"
     gene            complement(2236..2309)
                     /locus_tag="VFN38_03690"
     tRNA            complement(2236..2309)
                     /locus_tag="VFN38_03690"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2273..2275),aa:Met,seq:cat)
     gene            complement(2429..2764)
                     /locus_tag="VFN38_03695"
     CDS             complement(2429..2764)
                     /locus_tag="VFN38_03695"
                     /inference="COORDINATES: protein motif:HMM:NF033788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HET9010888.1"
                     /translation="MRSAAAVRHRTVAPVFAALGDETRLALVARLSGGETRSIAELTE
                     GTRLTRQAVTKHLRVLEGAKLVRSERAGRETRFALDPAPIHEVRAYADVVAAQWDAAL
                     ARLKAFVEE"
     gene            complement(2757..3230)
                     /locus_tag="VFN38_03700"
     CDS             complement(2757..3230)
                     /locus_tag="VFN38_03700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HET9010889.1"
                     /translation="MMSTTDRIERQIELKAPVSRVWRALTDHQEFGQWFGVALDGPFL
                     PGQPSTGHMTNPKYSHVAWKATVKEIRPETLFSYTWHPYAMDQSVDYSAEPPTLVEFR
                     LTPIAGGTRLEVIESGFDRIPAHRRDEAFRNNGNGWTAQIRNIERYVTQPVEQHA"
     gene            complement(3292..>3573)
                     /locus_tag="VFN38_03705"
     CDS             complement(3292..>3573)
                     /locus_tag="VFN38_03705"
                     /inference="COORDINATES: protein motif:HMM:NF014671.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory
                     sulfurtransferase FdhD"
                     /protein_id="HET9010890.1"
                     /translation="VREDVGRHNALDKLVGALVRAEERPDAGFVVMTSRGSFELVQKA
                     AILGVALLATVSAPTALAVRIAGDVGLTLVGFARDERLTVYAHAGRLRS"
BASE COUNT          580 a         1242 c         1243 g          508 t
ORIGIN      
        1 cgaagcagcc gggtgcgacg tcgtggcgcc ccaggaacca gcggcgcgcg gtggtgcacg
       61 tgacgacgat gtcgctccgc cgtgtcgccg ccggcaagtc gccgatcgcg gtgacgtcga
      121 tgcccagctc gcgggccatc ccgacggcat actcggcggc ccgctcggcg tcggcatcga
      181 aggcgaatgc cgtccggatc ggtcgcacgg cgcacagcgc acgcaactgg ctgcgtccct
      241 gctcgccgca cccgcagatc gtgacgacgg ccgcgtcggc tcgtgcgaga tggcgcgccg
      301 ccaccgccgt ggccgcggcc gtgcggacgc tggtgatctc gatcgagtcg agcacggcga
      361 gcgggtgccc ggtgtcggcg tcgaagagaa tgatgacgcc ctggatggtc ggcaggccgc
      421 gcaacgcgcg gttctccggg aagttggcgt tcaccttggc ggcgaacacg tgcgcgtcgc
      481 ccgcgagccc cgccgtcttc acgtggaagc cgccgccggg cacgtgcgtg gcgagcacgc
      541 cgggcgcgat gctcgtgccg gcggcgtgct gcgcgaaggc acgctccacg gcggcgatgc
      601 agtcgttcat gtcgagcagc cgcgcgacgt catgccgcgt gagcacgagc gtgtcggcct
      661 gcgtggagga ggagctcatc aggcaccccc ggagcggacg acgcgcgtcg tgaccgacag
      721 ctgaccgacg tgccgcatcg catgctccgc cccgtgcacg aggcacccga tcacggtcga
      781 gggcagtcgc gcgcggccga ccggacggaa gtcgcccagc gtggcggcgt cgatcgtccg
      841 aagctccgcg acggcggcgt cgacccgcgc ctggagcgca tcgaggaccc gccgcacgtc
      901 gccgagcggc aggggctcgc cctcgccgcg aatcgccgcg aactgctcct ccgagagcgc
      961 ctcgccgcgc gcgtaggtga agagccggtc gacgacgccg gtgatgtggc gcacgtggaa
     1021 cgcggccgag gcgacgccgg cggggcgtgc gttccactcc gactccgtca ggttttcgac
     1081 cagctcgtcg acgctttcgc gcacctgcag caggatgtgc gcgaccggtt gcagcagcgg
     1141 cggaacgccc tcgatcgggc cgcgctgcca ccattccgtg ttggccatgt tcagctctcg
     1201 ttgatacgtc ccgacgtcaa gtatacgcgc cgcgagcgta tcacggcgac gcactcgggc
     1261 gcatcggagt cagcgcgaca cctgaaaggg ctccacctgt tcgatcgggc ggccacttcg
     1321 tgcggagacg agctcgagga ccgtccggag cagcatggga tcctgagaat cccagaggac
     1381 cgtgcggtag ccccatcggg tgccgtcatc gaacgtgacc acgaaccact tgcgctgacg
     1441 ccaggtgcca cgcctggtct ggaaactgaa ctctccgtac cggatggttc tgatcgtgtt
     1501 gtatggacgg acgggcgggt tggccacgaa ggcttccccg atcacgatcc cctgcgtcgt
     1561 gagctgatcg gtcttgctga cacccgccgc gaacgatacg acggcggcgg acacgatggt
     1621 ccacgcgaag atgcgcccga gcttgctcgt gtcgaagtgg taccgcagct cgaaatagcg
     1681 cttgacccgg tcgctatcga gcctcaacgc atgacggacc caccacgatg tgggtcgcga
     1741 ggcggccagg aatgcgagga acaacgcgat cagccagtag agctcgggga tcggctccag
     1801 gatcagcacg gcgccgctgc gccgccgcac cagaaggctg agcagcgcgc ggaggcagaa
     1861 gaagaacgcg atcgtgaaga gcgtcacgaa cgcgaaggac gcgaggatga tctggccctt
     1921 gcgatcctcg tagcgctcac gttcgtcggc ggtgacgacg aattgcttca ccggtgcgag
     1981 tcgccgcaac agcatcatga cgagcgccac gccggccccg aggatgagtt gccccacgat
     2041 gcgatgcatg tagatggacg acacaggcgc gagcgggaca cgtggcgtcc ggctggaagg
     2101 cattcgccgc gggaagacgt gccacactga tacgtcgtat cgcgcgctgg cgaagtggtc
     2161 gccacgcggt ggggcggacc gaccacgccg aagcaaagaa ggtccgccag atcgatgacc
     2221 tggcggacct cttagtagca ggggcgggac tcgaacccgc gaccccggca ttatgagtgc
     2281 cgtgctctaa ccagctgagc taccctgccc cgaaacgatt cagccggccc tcgcggaccg
     2341 gccgacgtgc ctgcgcggag cgcaccaacc gcgtcgcgtc aggcctgaaa gatgaccggg
     2401 gcgggaaaga gagtcaagcg ctccacgctc actcctccac gaacgccttg agccgcgcga
     2461 gcgccgcatc ccactgcgcc gccaccacgt ccgcgtacgc ccgcacctcg tggatcggcg
     2521 ccggatcgag ggcgaagcgc gtctcgcgcc ccgcccgctc gctccgcacc agcttcgccc
     2581 cctccagcac ccgcagatgc ttcgtcaccg cctgccgcgt gagccgagtg ccctcggtca
     2641 gctcggcgat cgagcgcgtc tcccccccgg acagccgcgc cacgagggcg aggcgcgtct
     2701 cgtcgcccag cgccgcgaac accggcgcca cggtgcggtg ccggacggcc gccgcgctac
     2761 gcatgctgct cgacaggctg cgtgacgtac cgctcgatgt tcctgatctg cgccgtccag
     2821 ccgttgccgt tgttgcggaa cgcctcgtcc cgacggtgcg ccgggatccg gtcgaagccg
     2881 gactcgatca cctcgagccg cgtgccgccg gcgatcggcg tcagccggaa ctccacgagc
     2941 gtcggcggtt cggccgagta gtcgacgctc tggtccatgg cgtagggatg ccaggtgtag
     3001 gagaacaggg tctcgggacg gatctccttg accgtcgcct tccacgcgac gtgcgagtac
     3061 ttgggattcg tcatgtgccc cgtggacggc tgccccggca ggaaggggcc gtccagggcg
     3121 acgccgaacc actggccgaa ctcctgatga tcggtgaggg cgcgccagac gcgggacacg
     3181 ggcgccttca gctcgatctg ccgctcgatg cgatcggtcg tgctcatcat gctgcctccg
     3241 taagggttgc cggatactgg caaccaaaag gttgcatgtc aagtcccgcc gtcaggaccg
     3301 caggcggccg gcgtgggcgt agacggtgag ccgctcgtcc cgcgcgaacc cgaccagggt
     3361 gagtccgacg tcacccgcga tccgcacggc cagcgccgtg ggcgccgaga cggtcgccag
     3421 cagggcgacg ccgaggatgg cggccttctg cacgagctcg aagctgccgc ggctggtcat
     3481 gacgacgaac cccgcgtccg gccgctcctc cgcgcgcacg agcgcgccga cgagcttgtc
     3541 gagcgcgttg tggcggccga cgtcctcgcg cac
//
LOCUS       DASSYW010000237         2143 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1423206, whole genome shotgun sequence.
ACCESSION   DASSYW010000237 DASSYW010000000
VERSION     DASSYW010000237.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2143)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2143)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2143
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1423206"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            120..1379
                     /locus_tag="VFN38_03710"
     CDS             120..1379
                     /locus_tag="VFN38_03710"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HET9010891.1"
                     /translation="MPDIARDPAILKRKRLRQAGLGAIVLVILVAVSVQLARMEPAAP
                     SVERATVLEDTVKRGSIVRQVRGVGTLVPEDTRWLPATTEGRVERILLRPGANVQADS
                     VILVLSNPQVEQEAINARLALQSSQAGLDNLRAQLQNELLTQEALAASIESDFEQARM
                     EAQANEALAKEQLVSDLILKQSQIRAQTLKNRVAIEGRRLTAAREGNEARLRVQQASV
                     DQAQAMVDLSASRLKALQVTPGFAGVLQQVPVEVGQRVGPGQNLARVADPGRLKAELR
                     VAETEARDIEVGQPAEVDTRSGVVAGRVSRKDPAAANGTVTIDVSMTGELPRGAVPDM
                     SVDGTVQLQRLEDVLYVGRPSLGQDNSTAGLFRVVDADGNAQRVQVKFGLSSVNAIVV
                     LSGLKEGDRVVLSDMSSYDSYDRVRLR"
     gene            1389..1985
                     /locus_tag="VFN38_03715"
     CDS             1389..1985
                     /locus_tag="VFN38_03715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HET9010892.1"
                     /translation="MNEPLIKLESVKKVFLTDEVETHALDNINIEIHRGEYVSIAGPS
                     GCGKSTLLSILGLLDTPTDGTYTLNEQAVAKLSLAQRARVRNREVGFIFQSFNLIGDL
                     NVFENVELPLTYRGMKSAERKERVMAALEKVGMAHRARHLPSQLSGGQQQRVAVARAL
                     ISRPSIVFADEPTGNLDSRSGAEVLEEMARVTAVQTGA"
BASE COUNT          374 a          720 c          740 g          309 t
ORIGIN      
        1 gacgaatgaa cgtgcggtcc tggacagcac cgtcccacga ccgaacagtt ggagccgcaa
       61 aagcggccgt cccgcccctc gaaatgtggc atggcctttg agcttacaga gacggaccca
      121 tgcccgatat cgcccgtgac cccgccatcc tcaaacgcaa gcggctccgc caggccggcc
      181 ttggcgccat cgtcctcgtg atcctggtgg ccgtctcggt gcagctggca cggatggaac
      241 cggcggcgcc ctcggtcgag cgcgccaccg tgctcgaaga cacggtcaag cgcggctcga
      301 tcgtccggca ggtccgcggc gtcggcacgc tcgtccccga agacacgcgc tggctgccgg
      361 ccacgacgga agggcgtgtg gagcgcatcc tcctgcgccc gggcgccaac gtgcaggccg
      421 actccgtcat cctcgtgctg agcaatccgc aggtcgagca ggaggccatc aacgcgcgcc
      481 tggcgctgca gtcgtcgcag gcggggctcg acaacctgcg cgcgcagctg cagaacgagc
      541 tgctcacgca ggaagcgctg gccgcgtcga tcgagtccga cttcgagcag gcgcgcatgg
      601 aggcgcaggc caacgaagcg ctggccaagg agcagctcgt ctccgacctg attctcaagc
      661 agtcccagat cagggcacag acgctgaaga accgcgtcgc catcgagggg cgccgcctca
      721 cggcggcgcg cgaaggcaac gaggcacggc tgcgcgtgca gcaggccagc gtcgatcagg
      781 cccaggccat ggtggatctc agcgccagcc ggctgaaggc gctgcaggtg acgcccggat
      841 tcgcgggggt cctccaacag gtgccggtcg aagtgggcca gcgcgtcggc cctgggcaga
      901 acctggcgcg cgttgcggat ccgggacgtt tgaaggcgga attgcgggtg gcggagacgg
      961 aagcacgaga catcgaagtg ggccagcccg ccgaagtcga cacgcgcagc ggcgtcgtgg
     1021 cgggccgcgt gagcagaaaa gatccggcgg cagcgaacgg aaccgtgacg attgacgtct
     1081 caatgacggg cgagctcccc cgcggcgccg tgcccgacat gagcgtggac ggcaccgtgc
     1141 agttgcagcg gctcgaagac gtgctctacg tcggacggcc ttccctgggg caggacaaca
     1201 gcaccgccgg gctcttcagg gtcgtcgacg ccgacggcaa cgcccagcgg gtgcaggtga
     1261 agttcggcct gagctcggtc aacgcgatcg tggtcctgtc ggggctgaag gaaggcgacc
     1321 gcgtggtgct ctcggacatg tcctcgtacg actcgtacga ccgcgtgagg cttcggtagg
     1381 agattcgcat gaatgagccg ctgatcaagc tggaaagcgt gaagaaggtg tttctcaccg
     1441 acgaggtgga aacacacgcg ctcgacaaca tcaacatcga gatccatcgc ggcgagtacg
     1501 tgtcgattgc cggcccctcg ggctgcggca agtccacgct gctgtcgatc ctcggcctgc
     1561 tcgacacgcc gaccgacggc acctacacgc tcaacgagca ggcggtggcc aagctgtcgc
     1621 tggcgcagcg ggcgcgcgtg cgcaaccgcg aggtcggctt catcttccag agcttcaacc
     1681 tgattggcga cctcaacgtg ttcgagaacg tcgagctgcc gctcacgtat cgcggcatga
     1741 agtccgccga acgcaaggag cgcgtcatgg cggcgctcga gaaggtgggc atggcgcacc
     1801 gcgcgcggca cctccccagc cagctctccg gcggccagca gcagcgcgtg gccgtggccc
     1861 gtgcgctgat cagccggccg agcatcgtct tcgccgacga gcccacgggc aacctcgact
     1921 cccgctccgg ggcggaggtg ctcgaggaga tggcgcgggt gacggccgtc cagacgggcg
     1981 cctgagccat gtggagggcc gccctcaaga gcctgctcgg gcgcaagctg cgcctgctga
     2041 tgagcacgtt cgcgatcgtg ctcggcgtcg cgttcgtcgc cggctcgctg atcttctccg
     2101 acaccctcga ccgcagcttc accgcgatct tcgcctcctc ggt
//
LOCUS       DASSYW010000238         2006 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_139518, whole genome shotgun sequence.
ACCESSION   DASSYW010000238 DASSYW010000000
VERSION     DASSYW010000238.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2006)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2006)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2006
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_139518"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(174..503)
                     /locus_tag="VFN38_03720"
     CDS             complement(174..503)
                     /locus_tag="VFN38_03720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010893.1"
                     /translation="MTEFFGTKGIPDDPEYWDALAARVAGGARAGGFARLATTPAAWA
                     AALLIMASAGLLVLALREHEPASLGSEIGRALAPADYPGRDLAGAADAPQLGSLLFRP
                     AADWHPK"
     gene            complement(496..1062)
                     /locus_tag="VFN38_03725"
     CDS             complement(496..1062)
                     /locus_tag="VFN38_03725"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HET9010894.1"
                     /translation="MANDERGDAELLAAGARGDGPAFGILVRRHIRPATLLAAQILGD
                     RDDAEDIVQDSFTVVLERAGTFDASRPFPPWLFGIVRRLAQHRRARIARRARLLRLWG
                     KGTVAEPEPVHIEPALVAGADMDVVRRAMMTLSPMQRACFELVTVRDLSPAEVGAMHD
                     ISESTVRQHVFRARQSLRKALNPEGAND"
     gene            complement(1052..>2006)
                     /locus_tag="VFN38_03730"
     CDS             complement(1052..>2006)
                     /locus_tag="VFN38_03730"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HET9010895.1"
                     /translation="KLTRADGRDIATQVTEVHALAAEYRAEALVKVRDLARQARVSGV
                     EPIYGEIRGGAVARGRFFDEFDDAQSRRVAVVGGRIATDLFPGRDPVGETLRIRGVPF
                     AVIGVLDERGSGLDPFNEDEAIFVPLRVAQRRIFQVDYVQRFFARVDEERIEDGAAAI
                     RSLLASRHRSSGPNPPVFRVQDQRRLVEVRDEGAARLRAFQREVSVVLLVASALGVLA
                     LQLLSVRERRVEIGTRRSLGATRSDIFAQFLIEAAVVCLGGGLTGVSLGWIGTGIVGV
                     PLSPGFTAAAFFAAVVAGVAAAAAPARSAAVLHPAVSLRGQ"
BASE COUNT          334 a          729 c          685 g          258 t
ORIGIN      
        1 gctctgcgcc gagtcgagtt cgagctgatg ctgaagccgg tgcgtgaggt gggccaggtt
       61 gatggcaggg agtacgcgca cctggacgtg atgacgatcg tagacgatgc ccaggccgaa
      121 ccccgccgac agcgtcacca ggagcagcag gacgagcgcg atccaggaac gcttcatttc
      181 gggtgccagt ccgccgccgg ccggaagagg agcgatccaa gctgcggggc gtccgcggcg
      241 ccggcgaggt cgcgtccggg gtaatcggcc ggcgccagcg cgcgtccgat ctcgcttccc
      301 agcgaggcag gctcgtgctc gcgcaacgcg aggaccagga gcccggcgga cgccatgatc
      361 aggagcgccg cggcccacgc ggccggcgtc gtggcgagcc gcgcgaagcc gcccgcccgc
      421 gctcccccgg cgacccgcgc cgcgagcgcg tcccagtact cgggatcgtc gggaatgcct
      481 ttggtcccga agaattcagt cattcgcgcc ttcagggttc agtgccttcc ggagcgactg
      541 cctcgcccga aagacgtgtt gccgcacggt cgattcgctg atgtcgtgca tcgcgccgac
      601 ttccgcgggt gacaggtcgc gcacggtcac cagctcgaaa caggcgcgct gcatcggaga
      661 caaggtcatc atcgcgcgcc gcaccacgtc catgtccgcg ccggcgacga gcgccggctc
      721 gatgtggacc ggctcgggct ccgcgaccgt ccccttcccc cagagcctga gcagccgcgc
      781 acgacgcgcg atccgggccc ggcggtgttg ggcgaggcgg cgcacgatgc cgaagagcca
      841 gggcggaaac gggcgcgacg catcgaaggt accggcgcgc tccagcacca ccgtgaagct
      901 atcctgcacg atgtcctcgg cgtcatcgcg gtcacccagg atctgcgcgg cgagcagcgt
      961 cgccgggcgg atgtgtcgcc ggaccaggat accgaacgcg ggcccgtcac ctcgggcgcc
     1021 ggctgccagg agttccgcat cgccgcgctc gtcattggcc acgtagcgat accgccgggt
     1081 gaaggaccgc cgcggaccgg gctggcgcgg cagccgccgc gacacccgcc accaccgccg
     1141 cgaagaatgc cgccgcggtg aaccccggcg aaagggggac accgacgatt ccggtcccga
     1201 tccacccgag gctcaccccg gtcagcccgc ccccgaggca gacgaccgcg gcctcgatca
     1261 ggaactgggc gaatatgtcc gagcgagtcg caccgagtga gcgacgcgtg ccgatctcga
     1321 cgcgacgctc ccgcaccgag aggagctgga gcgccagcac accgagcgcg gacgccacaa
     1381 gcaagacgac cgacacctcg cgctggaatg cgcggagccg ggccgcgcct tcgtcccgga
     1441 cctcgaccag ccggcgctgg tcctgcaccc gaaataccgg cgggttggga ccgctcgagc
     1501 ggtggcgaga cgccagcagt gacctgatgg ccgccgcgcc atcctcgatg cgctcctcat
     1561 cgacgcgcgc gaaaaacctt tgcacgtagt ccacctggaa aatccgccgc tgggccacac
     1621 gcagggggac gaagatcgcc tcgtcttcgt tgaagggatc caatccgctg ccccgctcgt
     1681 cgagcacccc gatcaccgcg aacggcaccc cgcgaatccg gagtgtctct cccaccgggt
     1741 cgcggccggg aaagaggtcg gtggcgatcc gtccaccgac gactgcgacc cggcgtgatt
     1801 gcgcgtcatc gaactcatcg aagaagcgcc cccgggcgac cgcgccgccg cgaatctctc
     1861 catatatggg ttccaccccg gagaccctgg cctggcgggc gaggtcccgg accttcacca
     1921 gcgcctcggc gcgatactcc gcggcgagcg cgtgaacctc ggtgacctgg gtggcgatgt
     1981 cccggccatc ggcccgcgtc agcttg
//
LOCUS       DASSYW010000239         5593 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_765827, whole genome shotgun sequence.
ACCESSION   DASSYW010000239 DASSYW010000000
VERSION     DASSYW010000239.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 5593)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5593)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5593
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_765827"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1431)
                     /locus_tag="VFN38_03735"
     CDS             complement(<1..1431)
                     /locus_tag="VFN38_03735"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HET9010896.1"
                     /translation="MSDLRLAFRTLRKQPGFTAVALLTLAVGIGVNASLFGLISAFFL
                     QPLPVKDADRLVLVMQRSDVINMPYGHSYPDYLDYRRESKTIRDLVAYTPMPAHISAR
                     GQTPERTWIEVISPNYFALAGVTPAFGGFPQATDENKGGPPMVVLSYRYWERRFSANP
                     NIVGQPVILNGRAFTVAAIAPADFAGLSWAMAVSAWVPSGSTATLMNSGDEWRENRGV
                     PAFRLMGRLAPGRTIDQAVAEIDTIARRLAAEYPAEHRNARIQLIPENRARPDPAIAG
                     FLPIFAAVFMALVAFVLLIACANVANLMMSRALQRQRDLAIRAALGASRLRLVRLQVV
                     ESVVLAIVAGGLGFLLAQWAGDALARFVPAGDIPMNTDRPGDWRVYAFTVLASVAAGV
                     VTGLWPARAATRFDLVESLKEGGNTIGSRRHVLRNLLVVGQVMMSVVVLAGAGLFLHS
                     LQRLQQTALGFNPDGLVMASIDPGLQQ"
     gene            complement(1793..4195)
                     /locus_tag="VFN38_03740"
     CDS             complement(1793..4195)
                     /locus_tag="VFN38_03740"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HET9010897.1"
                     /translation="MPAGLLRDLRFAMRTLLKAPAFTAAVVATMTLGIGAAVSMFTVV
                     NSIVLRPLPFFESQRVVMLCETHVRVGDRCIASPPNVADWAVTVRALESVGVARSGTV
                     VMQSEEGRLGVHGGIATAGFFRVLRTAPALGRVFEDADMNRGSNTVAVVSHAFWRRVL
                     HGDPTAVGRALTLDGQTFTVIGVLQAGTYIPQLDLVEVWTPLTTSRDNVTNRAWRGFM
                     AIGRLAPGRDVTQLRAELDTVRAQLAAAYPDANAGWGTQVVSLRDQMVGSTRTTLWMF
                     LGATIFVLLIACANVAGLMLVRATRRAAEFAVRASLGAGRGRLVRQLLTESVVLSLAG
                     GLLGLLLASWTTRAFVLVAPPAIPRLDEVAIDGRVAAFAVLLSIATAIVFGLAPARQA
                     SKIDVSAALKGSRHGSARETRLRSALVVGEVALALVLFVSAGLLMRTFTRMMDWNPGF
                     ERDGLMTSWLLAPPGKYRTGTAAVDVLERVRDEVATAPGIQSAGLASAPPLFNGDGSD
                     TLSIDGGPPIDRASAPVEWFDASPGYFETLGLPTLRGRGFTDADAAAAPNVAIVNQTL
                     AKRFFGASDPIGRRVTMTAMGYTSEIVGVVADMKSYRADQPIGPQIYWPIRQYRRLAA
                     YLVVRATPGTPGVEALVRARVAAVDPEVQAGPVLSLNETFNRTLVTPRFNMLLFGAFA
                     LAAIALAAVGVFGVIAYSIASRTREIGVRIALGATPARLVADVVRRGMVLAGAGMAIG
                     LGAALALGRVLATLLYGLPATDGITLALTVAGFAAVAFAASYLPARRAARIDPLAALR
                     TE"
     gene            complement(4372..5139)
                     /locus_tag="VFN38_03745"
     CDS             complement(4372..5139)
                     /locus_tag="VFN38_03745"
                     /inference="COORDINATES: protein motif:HMM:NF015297.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HpcH/HpaI aldolase/citrate lyase family protein"
                     /protein_id="HET9010898.1"
                     /translation="MEFPVNKFKQGLRAGRRLVGLWNGLTSAAATEILADSGFDWILI
                     DGEHAPNETPMIAEQLRAASLGTAAPVVRPAWNDPVIFKRLLDVGAQTLLVPYIQSPD
                     EAARAVAATRYPPRGARGVAAVHRANRYGRVADYFARADAEMCVLAQLETRASVEQLE
                     AIAAVDGVDGVFVGPSDLAGSLGYIGNNAHPEVRRTIEDACRRAEAIGKPIGILAPLE
                     TDARAYFDMGFQFVAVGSDIVVLRKGCDALVKMFKGD"
     gene            complement(5271..>5593)
                     /locus_tag="VFN38_03750"
     CDS             complement(5271..>5593)
                     /locus_tag="VFN38_03750"
                     /inference="COORDINATES: protein motif:HMM:NF016176.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HET9010899.1"
                     /translation="SADFFDADNFPTIAFKSRRIADLQGATFTIVGDLTIRGITRDVA
                     LHVTSEGRGKDPWGGERAGFSATTKIKRSDFGLTWNQLLETGGVAVGDDVKISIDVEL
                     VKAR"
BASE COUNT          938 a         1923 c         1883 g          849 t
ORIGIN      
        1 ctgctggagc ccggggtcga tcgatgccat gaccagcccg tcgggattga agccgagcgc
       61 ggtctgctgc agccgctgca ggctgtgtag gaacaggccc gctcccgcga gcacgacgac
      121 cgacatcatg acctggccga cgacgagcag gttgcgcagc acatgacgac ggctgccgat
      181 cgtgttgccg ccttccttca gcgactcgac gaggtcgaac cgcgtggcgg cgcgggccgg
      241 ccagagcccg gtcaccactc ccgccgccac cgacgcgagc acggtgaagg cgtagacgcg
      301 ccagtctccg gggcggtcgg tgttcatggg aatgtcgcca gccggaacga agcgagcgag
      361 ggcgtcgccg gcccactgcg cgagcaggaa gccgagtccg ccggccacga tggcgagcac
      421 gacactctcc acgacctgca gccgtaccag ccgcaggcgg ctcgcgccga gcgccgcgcg
      481 gatggccaga tcgcgctggc gctgcagcgc gcgcgacatc atcaggttcg ccacgttcgc
      541 gcacgcgatg aggagcacga acgcgacgag cgccatgaac accgccgcga agatcggcag
      601 gaacccggca atggcgggat ccgggcgcgc gcggttttcg ggaatcagct gaatgcgtgc
      661 attcctgtgc tccgccgggt attccgcagc gagccgacgc gcaatcgtgt cgatctcggc
      721 gaccgcctgg tcgatcgtcc ggcccggagc gaggcggccc atgagccgga acgcaggcac
      781 gccgcggttc tcgcgccatt cgtctccgct gttcatgagt gtcgcggtcg atccggacgg
      841 tacccacgca ctcaccgcca tcgcccagga gaggccggcg aagtccgccg gcgcgatcgc
      901 ggcgaccgtg aatgcgcgtc cgttcaatat gactggctgc ccgacgatgt tcgggtttgc
      961 gctgaaccgg cgctcccagt accggtagct cagcacgacc atcggcggtc cccccttgtt
     1021 ctcgtcggtg gcctggggaa atcctccgaa tgccggtgtc acgcccgcga gcgcgaagta
     1081 attgggcgag atcacttcga tccacgttcg ttccggtgtc tggccgcgcg cgctgatgtg
     1141 cgccggcatc ggcgtgtagg ccacgagatc ccggatggtc ttcgactcgc ggcggtaatc
     1201 gaggtaatcg ggatacgagt gcccgtacgg catgttgatc acgtcgctgc gctgcatcac
     1261 gagcacgagc cgatcggcgt ccttgacggg cagcggctgc aggaagaatg cgctgatcag
     1321 tccgaagagg ctggcgttca cgccgatgcc gacggcgagc gtcagcagcg cgaccgcggt
     1381 gaagcctggc tgcttgcgca gcgtccgaaa tgcgaggcgc agatcgctca tgacttactc
     1441 ctgtcgcagc gccgcgaagc ggctcgtccg gggggagtgg cggctgctgt cgattgcaga
     1501 ctgccgagtg ccgggtgccg cctttgcgat cgccgactgc cgattgtgat tgaggagtgc
     1561 cgatcgggac tgccgattgt ccattgcggt cgccgattgc agaagggatt ctgcaatcgt
     1621 ccccagaccg gaccaactcg acatcgtcca tcgacgatcc caatcttcaa tcgccatctc
     1681 caatcgacaa tcctcactct caatcggcaa tcgtcaatca acaaatcggc actcgccact
     1741 cggcactcgg cattcggcat tcggcattcg gcattcggca ttggtcccgc atctattccg
     1801 tccgcagcgc cgcgagggga tcgatgcgcg cggcacgacg tgcgggcagg taactggccg
     1861 caaacgccac cgcggcgaag cccgccactg tcagggcgag cgtgattccg tccgtcgccg
     1921 gcagaccgta cagcagcgtt gcgagcacgc ggccgagggc gagggcggcc cccaggccga
     1981 tggccatgcc cgcgcccgcc aaaaccatgc cgcggcgcac gacgtccgca accaggcgcg
     2041 ccggcgtcgc gccgagtgcg atgcggacgc cgatctcgcg cgtccggctc gcgatcgagt
     2101 acgcgatgac gccgaacacg ccgaccgccg cgagcgcgat cgccgccagg gcgaaggcgc
     2161 cgaagagcag catgttgaaa cgcggcgtca cgagcgtgcg gttgaaggtc tcgttcaggc
     2221 tgagcacggg acccgcctgc acttcgggat cgacggcggc aactcgcgcg cgaacgagcg
     2281 cctccactcc cggtgttccc ggtgttgcgc gcacgacgag gtacgccgcc aggcggcggt
     2341 actgccggat gggccagtaa atctgcggcc cgatcggctg atcggcgcgg taagacttca
     2401 tgtccgccac aacgccgacg atttcgctcg tgtagcccat ggccgtcatc gtcacacgcc
     2461 tgccgatcgg atcgctcgcg ccgaagaagc gcttcgcgag cgtctggttg acgatcgcga
     2521 cgttcggcgc ggcggcggcg tcggcgtcgg tgaagccgcg tcctctgagc gtcggcaacc
     2581 cgagcgtctc gaaatagccg gggctcgcgt cgaaccactc gaccggcgcg gaggcgcgat
     2641 cgatcggcgg cccgccgtcg atggagagcg tatcgcttcc gtcgccgttg aagagcggag
     2701 gtgcggaggc caggccggcg gattggatcc ccggcgcggt cgcgacttca tcgcgtaccc
     2761 gttcgagcac gtcgacggca gcggttccag tccggtattt tcctggcggc gccagcagcc
     2821 acgaggtcat cagcccgtcg cgctcgaacc cgggattcca gtccatcatc cgcgtgaacg
     2881 tgcgcatcag cagcccggcg ctgacgaaaa gcacgagcgc cagcgcgacc tcgccgacga
     2941 cgagcgccga gcgcaggcgc gtctcgcgcg cgctcccatg acggctgccc ttgagcgccg
     3001 cgctgacgtc gatcttcgat gcctgacgcg cgggggcgag gccgaacacg atcgccgtcg
     3061 cgatcgacag cagcaccgca aacgccgcga cccgtccgtc gatggccact tcgtcgagcc
     3121 gcgggatcgc cggcggcgcg acgagcacga acgcccgcgt cgtccacgac gcgagcagca
     3181 gcccgagcag tccgcccgcg agcgacagaa ccacgctctc ggtaagcagc tgccggacga
     3241 gacgtccacg cccggcgccg agcgaggcgc gaaccgcgaa ttccgccgcg cgccgggtcg
     3301 cccggacgag catcagtccg gccacgttcg cacaggcgat cagcagcacg aaaattgtcg
     3361 ccccgaggaa catccacaat gtcgtccgcg tggagccgac catctgatcg cggagactca
     3421 cgacctgcgt tccccatccc gcgttggcat cggggtaggc ggcggcaagc tgcgcgcgca
     3481 ccgtgtcgag ctccgcacga agctgcgtca cgtcccggcc gggcgcgaga cggccgatcg
     3541 ccatgaagcc gcgccatgcc cggttggtca cgttgtccct gctcgtcgtc aacggtgtcc
     3601 acacctcgac caggtcgagc tgcgggatat aggtgccggc ctggagcacg ccgatgaccg
     3661 tgaacgtttg accgtcgagc gtgagcgcgc ggccgacggc ggtcggatcg ccgtgcagca
     3721 cgcgccgcca gaacgcgtgg ctgacgacgg caaccgtgtt cgatccgcgg ttcatgtcgg
     3781 cgtcctcgaa cacgcggccc agcgcggggg ccgtgcgcag cacgcggaag aagccggccg
     3841 tcgcaatccc gccgtgcacg ccgaggcggc cctcctcgga ctgcatgacg acggttccac
     3901 tgcgcgcgac gcccacggat tcgagtgcgc gaacggtcac cgcccagtcc gcgacgttcg
     3961 gcggcgaggc gatacaccgg tcaccgaccc gcacgtgggt ctcgcacagc atcacgacgc
     4021 gttgggactc gaagaacggc agcggccgca gaacgatgct gttgacgacg gtgaacatac
     4081 tgaccgccgc gccaatgccg agcgtcatcg tcgcgacgac agcggcggtg aaggcaggtg
     4141 ccttcagcag cgtgcgcatc gcgaagcgga gatcgcgcag gaggccggcg ggcatgtgag
     4201 aagtgcgtgc gcgaaccgtg ccacgccccc ggcgcccttg ccgcgagatc gggccgaaaa
     4261 tcattgacgg atttccgtca ccgacttccg gcgtccggtt gtgggattct gtgtagcgca
     4321 ggcgaacgcg ggccggtgaa gtgaatgtgc ggaaccggcc ctcccggccg ttcagtctcc
     4381 cttgaacatc ttcaccagcg cgtcacaacc cttgcggagc acgacgatgt cgctgccgac
     4441 ggcgacgaac tggaagccca tgtcgaaata cgcgcgtgcg tccgtctcga gcggcgcgag
     4501 aatgccgatg ggtttgccga tcgcttccgc gcggcgacag gcgtcctcga ttgtgcgccg
     4561 cacttccgga tgcgcgttgt tgccgatgta gccgagcgac ccggcgaggt cggacggtcc
     4621 gacgaagacg ccgtccacgc cgtccacggc ggcgatcgct tcgagctgtt cgacggacgc
     4681 gcgcgtctcg agctgcgcga gcacgcacat ctcggcgtcc gcacgcgcga aatagtcggc
     4741 cacgcgtccg tatcggttcg cgcggtgcac ggccgccacg ccgcgcgcgc cgcgcggggg
     4801 atatcgcgtc gccgccaccg cccgtgcagc ctcgtccggc gactggatgt aaggaacgag
     4861 cagcgtctgc gcgccgacgt cgagcagacg cttgaagatg accgggtcgt tccacgccgg
     4921 ccgtacgacc ggcgccgcgg tgccgagcga ggcggcgcgg agctgctccg cgatcatcgg
     4981 ggtttcgttc ggcgcgtgct cgccgtcgat gaggatccag tcgaaccccg agtcggcgag
     5041 gatttcggtc gccgccgcac tcgtcagccc attccacagc ccgaccaggc gccggcctgc
     5101 gcggaggccc tgcttgaatt tgtttacggg aaattccatc gcggtggatg atagcctctt
     5161 ttgaatcgtc gggcccccgc cagcacccat tcggcgcacc atcggcgccg ataggcacct
     5221 cttaggcacc tatcggcatc gaggggcatc tacatgcacc tagagcagcc ttagcgcgcc
     5281 ttgaccagct caacgtcaat cgagatcttg acgtcgtcgc cgacggcaac gccgccggtt
     5341 tcgagcagct gattccaggt cagcccgaag tcactccgct tgatcttcgt cgtcgcgctg
     5401 aacccggcgc gctcgccgcc ccagggatcc ttgccgcgtc cctcggaggt gacgtgcagc
     5461 gccacgtcgc gcgtgattcc gcgaatcgtc aggtcgccca cgatcgtgaa cgtcgcgccc
     5521 tgaaggtcgg cgatgcggcg gctcttgaac gcgatggtgg ggaagttgtc agcgtcgaaa
     5581 aaatccgccg agc
//
LOCUS       DASSYW010000240         3153 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_540778, whole genome shotgun sequence.
ACCESSION   DASSYW010000240 DASSYW010000000
VERSION     DASSYW010000240.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3153)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3153)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3153
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_540778"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1452)
                     /locus_tag="VFN38_03755"
     CDS             complement(<1..1452)
                     /locus_tag="VFN38_03755"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HET9010900.1"
                     /translation="MTISAISSPPSVVESRDPATGEVWRQYPAGTSDDVRDAVGRARE
                     AQRTWGALPVRQRARVLERFRRALFARRHEVADALTRETGKPLVEALGSEVLIALDYA
                     HFYAGESRRLFDASWITPTSLSMWRKRVRVEHVPLGVVAVVSPWNYPFMLAAGVVLPA
                     LVAGNAVLLKPSELTPTSGALLGELLAEAGAPSGVMTVVQGAGATGAALVASAVDKVF
                     FTGSVATGRKVALACAERLIPCSLELGGSDPAIVLEDADVAHASRGIAWGRFTNAGQT
                     CVAPKRVFVVGAAYEPFLAALTLAVESLRAGPSSGEDAHLGPLIHPGQRALLEAQLAD
                     ALERGARVVARGTAPTGDGSYFPPTLLADVTPEMRVMREETFGPLLPVVGVRDEDDAV
                     GRANESEFGLSASVWSRDAERARAVAERIEAGTVAINDVAIVAGMADVPHGGVKASGS
                     GRSHGSAGLLECVRTQTLIADRFGGWAQPWWFGG"
     gene            complement(1477..2655)
                     /locus_tag="VFN38_03760"
     CDS             complement(1477..2655)
                     /locus_tag="VFN38_03760"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HET9010901.1"
                     /translation="MSRRSPARVRRVAEPGAGPSAPESVPLAPRRRRSRVVPGDRGLW
                     PRLKRLILHASKLTGLQAVVRESRWRQARLLVLCYHGISTDDEHEWNAELYMPAPMFR
                     RRLEILRDGGYSVLPLDDAVERLYQGTLPPRSVVITFDDGAANFYSRALPLLREFDFP
                     ATVYLTTYHTSARRPVFDVTLPYILWKGRHRSLSRDVVGGEGEWRLSDAAEREQAREA
                     LRAHLIARGRGGHAEEALLAEVARRLGVDFDAIRERRIMHLMTEEEVSVAAELGVSIQ
                     LHTHRHRTPRDEAEFAREIEVNRGHIVRLTRRTDGRWHFCYPNGWRARKFIPWLRGLD
                     VRSAATCQPGIASRTTDPILLPRLVDTTLLSEIEFEGWLSGVSAFLPRRVQPYGHDDV
                     "
     gene            complement(2652..>3153)
                     /locus_tag="VFN38_03765"
     CDS             complement(2652..>3153)
                     /locus_tag="VFN38_03765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HET9010902.1"
                     /translation="AIMGGSNGGLLVGACLNQRPDLFGAAIPAVGVMDMLRFHKFTIG
                     WAWKSDYGSADDSAQFRALHAYSPLHNLKPGTRYPATLVTSADHVDRVVPGHSFKFAA
                     TLQAAQAANGPPVLIRIESKAGHGAGKPTSKSIEEIADLWAFTAYHLGMQPLAATPRA
                     APAIVP"
BASE COUNT          458 a         1173 c         1109 g          413 t
ORIGIN      
        1 cccgccgaac caccagggct gcgcccaccc gccgaaccgg tccgcgatca gcgtctgcgt
       61 ccgcacgcac tcgaggagcc ccgcgctccc atgggagcgg ccgctgccgc tcgccttcac
      121 cccgccgtgc ggcacgtcgg ccatgccggc gacgatcgcc acgtcgttga tcgccaccgt
      181 ccccgcctcg atccgctcgg ccaccgcgcg cgcccgctcc gcgtcgcggc tccacacgct
      241 cgcgctgagc ccgaactcgc tctcgttggc gcgccccacc gcgtcgtcct cgtcacgcac
      301 ccccaccacc gggagcagcg gtccgaacgt ctcctcgcgc atcacccgca tctcgggggt
      361 gacgtcggcg agaagggtgg ggggaaagta cgagccgtcg ccggtgggag cggtgccgcg
      421 cgccaccacg cgggcgcccc gctcgagcgc gtcggcgagc tgggcctcga gcagcgcgcg
      481 ctgcccgggg tggatgagcg ggccgaggtg cgcgtcctct cccgacgaag gtcccgcgcg
      541 cagcgactcg accgccagcg tgagcgccgc gagaaagggt tcgtaggcgg cgcccaccac
      601 gaagacacgc ttcggcgcca cgcaggtctg ccccgcgttc gtgaaccgtc cccacgcgat
      661 cccgcgcgag gcgtgcgcga cgtcggcgtc ctcgagcacg atcgcggggt cgctcccccc
      721 cagctccagg ctgcacggga tcaggcgctc ggcgcaggcg agcgccacct tccgcccggt
      781 cgccacgctg ccggtgaaga agaccttgtc caccgcggac gcgaccaggg cggcgcccgt
      841 tgcacccgcg ccctgcacga cggtcatcac gccgctcggc gcgccggcct cggcgagcag
      901 ctcgccgagc aatgcgcccg aggtcggggt cagctccgag ggcttgagca gcacggcgtt
      961 ccccgccacc agggccggca ggacgacgcc ggcggcgagc atgaaggggt agttccaggg
     1021 ggacacgacg gcgaccacgc cgagcggcac gtgctccacc cgcacccgct tgcgccacat
     1081 cgagagcgag gtcggcgtga tccaggacgc gtcgaagagc cggcgtgact cgcccgcgta
     1141 gaagtgggcg tagtcgagcg cgatcaggac ctcgctcccc agcgcctcga cgagcggctt
     1201 tcccgtctcg cgcgtcagcg cgtctgccac ctcgtgccgt cgcgcgaaga gcgcgcgccg
     1261 gaaccgttcg agcacccgcg cccgctggcg caccgggagc gcgccccacg tccgctgcgc
     1321 ctcgcgcgcg cggcccaccg cgtcgcgcac gtcatcggac gtccccgccg ggtattgccg
     1381 ccacacctcg ccggtggcgg ggtcgcgcga ttcgaccacg gagggaggag aggagattgc
     1441 ggatatcgtc atgggacccg atggtacggg ctggcgtcag acgtcgtcgt ggccgtacgg
     1501 ctgcacccgc cgcggaagga acgccgagac tcccgacagc cacccctcga actcgatctc
     1561 cgagagcagt gtcgtgtcga cgagccgtgg aaggagaatg gggtccgtgg tgcgcgacgc
     1621 gatgcccggc tggcaggtgg ccgccgagcg cacgtcgagt ccgcgcagcc atggaatgaa
     1681 cttccgggcg cgccatccgt tcggatagca gaagtgccac cgcccgtcgg ttcgcctggt
     1741 gagccggacg atgtgcccgc ggttgacctc gatctcgcgc gcgaactcgg cctcgtctct
     1801 cggcgtgcgg tggcggtgcg tgtggagctg gatgctcact ccgagctcgg cggcgacgct
     1861 cacctcctcc tcggtcatga gatgcatgat ccggcgctcg cgaatggcgt cgaagtccac
     1921 gccgagccgg cgcgcgacct cggcgagcag cgcctcctcc gcgtgtccgc cgcgcccccg
     1981 cgcgatgaga tgggcgcgca gcgcctctcg cgcctgctct cgctcggcgg catcgctcaa
     2041 cctccactcc ccctcgccgc cgacgacgtc gcgcgacagc gaacggtgac gtcccttcca
     2101 gagaatgtac ggaagggtga cgtcgaagac ggggcgcctg gcgctcgtgt gatacgtggt
     2161 caggtagacc gtcgccggga agtcgaactc ccggaggagg ggcagcgccc gcgaatagaa
     2221 gttcgcggcg ccgtcgtcga acgtgatgac gacgctgcgc ggcggcagcg tcccctggta
     2281 gagccgctcc acggcgtcgt ccagcggaag caccgagtag ccgccgtcgc gcaggatctc
     2341 cagccggcgc cggaacatcg gcgccggcat gtagagctcc gcgttccact cgtgctcgtc
     2401 gtcggtcgag atgccgtgat agcagagcac gagcagacgc gcctgccgcc agcggctctc
     2461 gcgcaccacg gcctggaggc ccgtcagctt cgaggcatgg aggatcagcc gcttgaggcg
     2521 tggccagagc ccgcggtcac cgggcaccac acgcgaacgt cgccggcgcg gcgcgagggg
     2581 cacggactcg ggcgccgagg gaccggcgcc cggctccgcg acgcgccgca cgcgcgccgg
     2641 cgatcgccgg ctcacggcac gatcgcgggc gcggcgcgcg gcgtcgcggc gagtggctgc
     2701 atgccgagat ggtacgcggt gaacgcccag aggtcggcga tctcctcgat cgacttcgac
     2761 gtcggcttgc ccgcgccgtg tcccgccttg ctctcgatgc ggatcagcac cggcgggccg
     2821 ttcgcggcct gcgcggcctg cagcgtcgcc gcgaacttga acgagtgacc cggcacgacg
     2881 cgatcgacgt ggtcggccga cgtcaccagc gtcgccggat agcgcgtgcc gggcttgaga
     2941 ttgtggagcg gcgagtaggc gtggagcgcc cggaactgcg ccgagtcgtc ggccgagccg
     3001 tagtccgact tccacgccca gccgatcgtg aacttgtgga agcgcagcat gtccatcacg
     3061 ccaaccgcgg gaatcgccgc gccgaacaag tcgggccgct ggttgagaca ggcgcccact
     3121 aacaatccgc cattgctgcc acccatgatg gcg
//
LOCUS       DASSYW010000241         2426 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1451246, whole genome shotgun sequence.
ACCESSION   DASSYW010000241 DASSYW010000000
VERSION     DASSYW010000241.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2426)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2426)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2426
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1451246"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..475
                     /locus_tag="VFN38_03770"
     CDS             <1..475
                     /locus_tag="VFN38_03770"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HET9010903.1"
                     /translation="PERMKILEPAGFLAEAGARIAFGSDWPVDALDQWFAFKVGVTRT
                     NSPDAPAEYRGRLGDDPGLSREAVLRAATINAAYELHQDDATGSLEAGKLADLIVLDG
                     DPLANLRNTNTIRYVMKNGRLYEGETLNEIWPRQKALPAQHWRNGDPVANTSVQW"
     gene            469..>2426
                     /locus_tag="VFN38_03775"
     CDS             469..>2426
                     /locus_tag="VFN38_03775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HET9010904.1"
                     /translation="MVNDMSYQLPATSGQRAMRGITVLTVLTVLTAGAASAQGPGGPG
                     APSGGAPKKPLPLEPGRKAEWTATKGTWISLDVSPDGQTIVFDLMGDLYTLPIAGGKA
                     TRITNGMAYDAQPRYSPDGKKILFVSDRSGGDNLWTITVDGKDSTQITQGNSNLYISP
                     EWLPDGKHVVASRAGGLGGSHKIYMYPAEGGSGMQLTTQPAAFKFIGAAFSPDGRYMY
                     MAGRQGDWNYNSLMPQIQLGVYDRQTGQASQLANRYGSSFRPAISPDGKWLTYGTRHE
                     NKTGLRIRDLASGDERWLLFPIQRDDIESRAPLDVLPGYSFTPDSRSVVISYGGEIWR
                     VGVDGGSPAKIPFSADVKLDIGPEVKFVNRVDTTSAFTAKQIRNIAPSPDGKRIAFTA
                     VDRLYIADLPDGKPRRVTTTEQGEYHAAWSPDGQTLAWITWDEKAGGQIMKISPDAKN
                     ARPVQVTKVAALYYNIAFSPKGDRIVASRAQARQLQEATGAFFGATGADFVWVPSAGG
                     DVTLIGPAGTRDGMHFTSDTARIFAYSPVEGLVSFRWDGTDVKPHLRVTGPPPPFGGS
                     PHEDDEYVYLPRRLAPMRADVLMSPPAAGSDLEPTPQAPPAGIIIMAPQGDMALAQVG
                     NDLYTIQVPVTGGATPMVSVAQVQGGPVP"
BASE COUNT          430 a          848 c          793 g          355 t
ORIGIN      
        1 ccctgagcgg atgaagatcc tcgagccggc gggtttcctg gcagaggcgg gcgcccggat
       61 agcgttcggc agcgactggc ccgtggacgc gctggatcag tggttcgctt tcaaggtcgg
      121 cgtgacccgc acgaacagcc ccgacgctcc agccgagtat cgcggcagac tcggcgacga
      181 tcccgggctt tcgcgcgaag ccgtgctgcg cgcggcgacg atcaacgcgg cctatgagct
      241 gcatcaggat gatgcgaccg gctcgctcga agccggcaag ctcgccgatc tcatcgtgct
      301 cgacggcgat ccgcttgcca atctccgcaa caccaacacg atccgatacg tgatgaagaa
      361 cggccggttg tacgagggtg aaaccctcaa cgagatctgg cctcgccaga aagcgcttcc
      421 agcgcagcat tggcggaatg gcgatcccgt ggccaacacc tcagttcagt ggtgaacgac
      481 atgagctatc agctaccagc taccagcggc cagcgggcca tgcgcgggat taccgtccta
      541 accgtcctaa ccgtcctaac cgccggcgcc gcctcggccc agggcccggg cggtcccgga
      601 gctcccagcg gcggcgcacc gaagaagccg ctgccgctcg aacccggacg caaggccgag
      661 tggactgcca ccaagggcac ctggatttcg ctcgacgtga gtcccgacgg acagaccatc
      721 gtcttcgacc tcatgggcga tctctacacc ttgcccatcg cgggcggcaa ggccacgcgc
      781 atcaccaacg gcatggccta cgacgcgcag cctcgctaca gccccgacgg gaagaagatc
      841 ctcttcgtct ctgaccggag cggcggggac aacctctgga ccatcacggt cgacgggaag
      901 gacagcaccc agatcaccca ggggaacagc aacctgtaca tatcccccga gtggttgccg
      961 gacggtaagc acgtcgtggc gagccgcgcg ggcggactcg gcgggtcgca caagatctac
     1021 atgtaccccg cggagggtgg gagtggcatg cagctcacca cgcagcccgc ggccttcaag
     1081 ttcatcggcg cggcgttctc gcccgacggg cgctacatgt acatggcggg acgccagggc
     1141 gactggaact acaactcgct catgccgcag atccagctcg gcgtgtacga ccggcagacc
     1201 gggcaggcgt cccagttggc gaaccgctac ggctcgagtt tccgcccggc gatttcgccc
     1261 gacggcaagt ggctcaccta cggtacccga cacgagaaca agaccgggct ccgcatccgc
     1321 gatctcgcgt cgggtgacga gcgctggctg ctcttcccga tccagcgtga cgacatcgag
     1381 tcgcgcgcgc cgctcgacgt cctgccgggc tacagcttca cgcccgattc gcgctcggtg
     1441 gtcatctcgt acggcggcga gatctggcgc gtcggtgtcg acggcgggtc gccggcgaag
     1501 attccgttca gcgcggacgt gaagctcgac atcggtcccg aggtcaagtt cgtgaaccgg
     1561 gtcgacacca cctctgcgtt cacggcgaag cagatccgca acatcgcgcc gtcacccgat
     1621 ggcaagcgga tcgcgttcac cgcggtcgac cggctgtaca tcgccgacct gccggacggc
     1681 aagccgcgtc gcgtcaccac gaccgagcag ggcgagtacc acgcggcctg gtcgcccgat
     1741 ggccagaccc tggcgtggat cacctgggac gagaaggcgg gcggccagat catgaagatc
     1801 tcgccggacg ccaagaacgc gcggccggtg caggtcacca aggtcgcggc gctctactac
     1861 aacatcgcgt tctcgccgaa gggcgatcgc atcgtggcct cgcgggcgca ggcgcgccag
     1921 ctgcaggaag ccaccggcgc gttcttcggt gccaccggcg cggacttcgt ctgggtaccg
     1981 agcgcgggcg gtgacgtcac gctcatcgga ccagccggca cccgtgacgg catgcacttt
     2041 accagcgaca ccgcgcggat cttcgcctac agcccggtcg agggactggt ctccttccgc
     2101 tgggacggga ccgacgtcaa gccgcacctc cgcgtcacgg ggccgccgcc gccgttcggc
     2161 ggatcgccgc acgaagacga tgagtacgtg tacctgccgc ggcgactggc tccgatgcgc
     2221 gccgacgtgc tgatgtcgcc tccggccgcg ggctccgacc tggaaccgac tccccaggcc
     2281 ccgccggcgg gcatcatcat catggcgccg cagggcgaca tggccctggc gcaggtcggg
     2341 aatgatctct acaccatcca ggtcccggtt accggcggcg ccacgccgat ggtgagcgtg
     2401 gcacaggtcc agggcgggcc ggtccc
//
LOCUS       DASSYW010000242         2330 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_529100, whole genome shotgun sequence.
ACCESSION   DASSYW010000242 DASSYW010000000
VERSION     DASSYW010000242.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2330)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2330)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2330
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_529100"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            174..710
                     /locus_tag="VFN38_03780"
     CDS             174..710
                     /locus_tag="VFN38_03780"
                     /inference="COORDINATES: protein motif:HMM:TIGR03830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II TA system antitoxin MqsA family protein"
                     /protein_id="HET9010905.1"
                     /translation="MSDSSLEGHLHRLCGGRYGHASETVTIRVSGMSAVVERAFFRCA
                     KCGDEQRTVEQREIAEQAAVATMRESNGLLTPKQIRQLRDSLGLTPQQMGEILYGTPK
                     GIDEGWERGRYLQNRAADAMLRSLADRPTLERLAAKAGVQLPVPEGSGEGRAAGAVGA
                     PAGGAPAGGAPAEGAPNR"
     gene            738..1724
                     /locus_tag="VFN38_03785"
     CDS             738..1724
                     /locus_tag="VFN38_03785"
                     /inference="COORDINATES: protein motif:HMM:TIGR01777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01777 family oxidoreductase"
                     /protein_id="HET9010906.1"
                     /translation="MTDDASDSPHAVTAADLERHERFAERGTLRVAITGATGLVGRAL
                     VPFLAGGGHEVRRLVRSRASLGPGDVYWNPAAGEIDADALDGLDAVIHLAGETVAERW
                     TIAHKRAIRESRVQGTGLLARTLAGLPRPPRVLLSASAIGYYGDGGDRELDETSPPGS
                     DFLANVAREWEEAAAPAARRGIRVVHPRFGVILSARGGALERLLPPFQLGAGGKIASG
                     KQWMSWIALDDVVGALHFLLYTDSLAGPVNLTAPNPLTNADFGHVLGHVLHRPAVATV
                     PAFALRMMFGEMADTMLLAGQRVLPRKLLAAGFQFRHPTLEEALRWELGKAR"
     gene            1880..2143
                     /locus_tag="VFN38_03790"
     CDS             1880..2143
                     /locus_tag="VFN38_03790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010907.1"
                     /translation="MTAILLEWLLFVLLIGAVGGVSYLGMLHLTPLGRRIRETRNRAL
                     IDREAELTCPIHGVVPDGELVRLPSGERMCPFCYREAAQGRIE"
BASE COUNT          322 a          874 c          809 g          325 t
ORIGIN      
        1 ccacgcatca tgatgcgggg cgagtcgggt ccctaatgcc ggatccctgc gccagcgacg
       61 tcgcgatgtg tagtagtccc aggtacctag tacctggggc ggacccatcg agatgccagc
      121 ccctccctgg tacgaggtac acagatcgcc cccagaagcg gtaacttgct cgaatgtccg
      181 attcctccct cgaaggccac cttcaccgtc tctgcggcgg ccgttatggc cacgccagcg
      241 agaccgtcac gatccgcgtt agcgggatgt ccgccgtcgt cgagcgcgcc ttctttcgct
      301 gcgccaagtg cggcgacgag cagcgcacgg tggagcagcg cgagatcgcc gagcaggcgg
      361 cggtcgccac gatgcgcgag agcaacgggc tgctgacgcc gaagcagatt cgccagcttc
      421 gcgactccct cggcctcact ccgcagcaga tgggcgagat cctctacggc accccgaagg
      481 ggatcgacga ggggtgggag cgtggacgct acctccagaa ccgcgccgcc gacgccatgc
      541 tgcgcagcct cgccgaccgg ccgaccctcg agcggctcgc cgccaaggcc ggggtccagc
      601 tcccggtgcc cgaggggagc ggcgagggac gggcggccgg cgccgtggga gcgccggccg
      661 ggggagcacc cgccggggga gcacccgccg agggagcacc gaaccgataa ccgccagacg
      721 ctcgtgaccc gctccccatg accgacgatg cctccgactc cccgcacgcc gtgacggccg
      781 ccgatctcga gcgccacgag cgcttcgccg agcgcggcac gcttcgcgtc gcgatcaccg
      841 gcgcgaccgg gctcgtcggc cgggcgctcg tccccttcct cgccggcggc gggcacgagg
      901 tgcggcggct cgtccgctcg cgcgcctcgc tggggccggg cgacgtctac tggaatccgg
      961 cggccggcga gatcgacgcc gacgcgctcg acgggctgga cgccgtgatc cacctcgccg
     1021 gcgagaccgt cgccgagcgc tggacgatcg cccacaagcg cgccatccgg gagagccggg
     1081 tgcagggcac cgggctgctc gcccgcaccc tcgccgggct tccgcgcccc ccgcgcgtgc
     1141 tcctgagcgc ctcggcgatc ggctattacg gcgacggtgg cgaccgcgag ctcgacgaga
     1201 cgagcccgcc cggctcggac ttcctggcca acgtcgcccg cgagtgggag gaggccgccg
     1261 cgcccgccgc gcggcggggg atccgggtcg tgcacccgcg cttcggcgtc atcctcagcg
     1321 cccgcggcgg ggcgctcgag cggctccttc cccccttcca gctgggggcc ggcgggaaga
     1381 tcgcgagcgg caagcagtgg atgagctgga tcgccctcga cgacgtcgtc ggcgcgctcc
     1441 acttcctcct ctacaccgac tccctcgccg gcccggtcaa cctcaccgcc ccgaacccgc
     1501 tcaccaacgc cgacttcggc cacgtcctcg gccacgtcct ccaccggccg gccgtcgcca
     1561 ccgtgccggc gttcgccctc cgcatgatgt tcggcgagat ggccgacacg atgcttctcg
     1621 ccggccagcg cgtcctcccc cggaagctcc tggccgccgg attccagttc cgccacccga
     1681 cgctggaaga agcgttgcgg tgggagctgg gaaaagcgcg atagggcggg gcgcggggcg
     1741 gggggcgcgg agtgagggcg agaaacggtg acacgcgcat cgccgggatg cggcgctctg
     1801 ttcagactcg ccatagactc cgacgtgggg ggggccccgc accccgctcc ccactcccta
     1861 ctccccttac tgttctccga tgaccgcgat ccttctcgag tggctgctct tcgttctgct
     1921 gatcggggcg gtcggcggcg taagctatct ggggatgctc catctcactc ccctcgggcg
     1981 gcgcattcgc gagacgcgca accgcgcgct gatcgatcgc gaggcggagc tgacctgccc
     2041 gatccacggc gtcgtccccg acggggaact ggtgcggctg ccgagtgggg agcggatgtg
     2101 tcccttctgc taccgcgagg cggcgcaggg gagaatcgag tagctcggcg ccgttcgaag
     2161 aaacgcggca gcgcggcttt ccgcggaggc tcggcgaaag cgggagcgcg gatttgcgcg
     2221 gatccttcga acggcgattc ccacggatcg tccccacgcg gggcggggct ccgcgcgccg
     2281 cgcgcacctg tcatcgcgct gtcgtcgtcc tctgcgccct ccgcgccctc
//
LOCUS       DASSYW010000243         2313 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_753797, whole genome shotgun sequence.
ACCESSION   DASSYW010000243 DASSYW010000000
VERSION     DASSYW010000243.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2313)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2313)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2313
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_753797"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            471..559
                     /locus_tag="VFN38_03795"
     tRNA            471..559
                     /locus_tag="VFN38_03795"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:505..507,aa:Ser,seq:tga)
     gene            complement(560..1288)
                     /locus_tag="VFN38_03800"
     CDS             complement(560..1288)
                     /locus_tag="VFN38_03800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010908.1"
                     /translation="MLEAAFWGFVGGAALLIGAVVGLVAPASQRAIGLVMGFGAGVLI
                     SALAFELTDEAFRRGGADAVSLGLAAGGLAFFAGDWVIDHRGGEGRKRSDGRQAAGSG
                     SAIVLGALMDGIPESVAIGVTLLEGGGVGVAVVAAVFLSNVPESLSAATGLRRAGHSS
                     RWILALWTAVMLVSALAAALGYAFLGDASANVVGFIQAFAAGAILVMLADTMMPEAFE
                     DAGSLVGLVTVLGFSLAFLLSTTG"
     gene            1332..1763
                     /locus_tag="VFN38_03805"
     CDS             1332..1763
                     /locus_tag="VFN38_03805"
                     /inference="COORDINATES: protein motif:HMM:NF016056.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF393 domain-containing protein"
                     /protein_id="HET9010909.1"
                     /translation="MTDAGESLTVLYDADCGFCRWTLATLLAWDRKARLRPVAIQSPE
                     SQALLRDVPPELRLASAHAVTPEGRVYSGGAAAEHVARMLPGGAPFAAAARAFERPVD
                     RGYRWVADHRTGLSRFVPARAKDRAAARIERHAARARVRVP"
     gene            1768..1995
                     /locus_tag="VFN38_03810"
     CDS             1768..1995
                     /locus_tag="VFN38_03810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010910.1"
                     /translation="MRRSPSQTFSAKLAVALACGALGGIAAFAAGGCGEDRGSSGTGT
                     GGTGTGTGETHPSTTPSTTPTTESTPTTTTK"
     gene            2000..>2313
                     /locus_tag="VFN38_03815"
     CDS             2000..>2313
                     /locus_tag="VFN38_03815"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HET9010911.1"
                     /translation="MRVCVTGGLGFVGAHLCRLLAGRGHEVVCVDRLSGHYAPGSGAD
                     AAAELDSLGVEVVRADAADPLALALVPGCHAVVHLAALPGVRARHSLRTLWEGTVAVT
                     AAV"
BASE COUNT          336 a          882 c          799 g          296 t
ORIGIN      
        1 ccctggtggg ctgggcgagc gggtcgccag gcgacatcgg gaggtccatt cttgtcacga
       61 ctttacacaa ctgacctgtg aaaaccagca aacgcatggt attttcacat gctctctgtg
      121 taaatagcga gacggagcgt ctgtatggcc tacgtgatca acgagccgtg catcgggacg
      181 aaggacacct cctgcgtcga ggtctgcccg gtggactgca ttcacccgac cccggacgag
      241 cccggcttcg cggaagcgga ttcagctctt catcgatccg gaggagtgca tcgactgcga
      301 cgcgtgcgtg gaggcgtgcc cggtcgacgc gatcacctcc gaggatcagg ttcccccgga
      361 gtggaagcac tacatcgccc tcaacgcgga ctactacaag agcgcgccgc gctgacggtg
      421 ccgcggctaa cctccggcgc agggccaggc ttggctctac ggcaagcccc ggaggggtgg
      481 cacagcggtt gaatgcggcg gtcttgaaaa ccgttgtgcg ccgtgaggcg taccgagggt
      541 tcgaatccct ccccctccgc tagcccgtgg tggagagcag gaacgcgagc gagaagccga
      601 gcacggtgac gaggcccacc aggctgcccg cgtcctcgaa cgcctcgggc atcatcgtgt
      661 cggcgagcat cacgaggatc gcccccgcgg cgaacgcctg gatgaagccc accacgttcg
      721 ccgatgcgtc gccgaggaac gcgtagccca gcgccgcggc gagcgcggac acgagcatca
      781 ccgctgtcca gagcgccagg atccagcggc tcgagtgccc cgcgcgcctg aggccggtgg
      841 cggccgacag cgactccggc acgttcgaca ggaacacggc cgcgaccacc gccacgccca
      901 cgcccccgcc ctcgagcagc gtcacgccga tggccacgga ctccgggatg ccgtccatca
      961 gcgcgccgag cacgatcgcg ctgcccgagc ccgccgcctg gcgcccgtcg gagcgcttgc
     1021 ggccctcccc gccgcggtgg tcgatcaccc agtcgcccgc gaagaacgcg aggccgccgg
     1081 ccgcgagccc aagcgacacc gcgtccgcgc cgccgcgccg gaacgcctcg tcggtgagct
     1141 cgaaggcgag cgcgctgatc agcacgcccg cgccgaatcc catcacgagg ccgatcgcgc
     1201 gctgcgacgc gggcgccacg aggcccacca cggcgccgat cagcagagcg gcccctccga
     1261 cgaaccccca gaaggcggct tcgagcacgc ggctgttttg ccccgcggcc tccccgggca
     1321 aacggaaccc tgtgaccgac gcgggcgagt ccctgaccgt cctctacgac gccgactgcg
     1381 gcttctgccg ctggacgctc gccacgctgc tcgcgtggga ccggaaggcg cgcctccgtc
     1441 cggtcgcgat ccagtcgccc gagagccagg cgctcctgcg cgacgtcccg cccgagctcc
     1501 ggctcgcgtc cgcgcacgcg gtgactcccg agggccgcgt ctactcgggc ggcgcggcgg
     1561 cggagcacgt ggcgcgcatg ctgcccggcg gcgcgccgtt cgcagccgcg gcgcgcgcgt
     1621 tcgagcgccc ggtggaccgc ggctaccgct gggtagcgga tcaccgcacg gggctgagcc
     1681 gcttcgtgcc ggcccgcgcc aaggaccgcg ccgccgcgcg gatcgagcgt cacgcggcgc
     1741 gtgcccgtgt tagggtgccc taactcgatg cgccgctcgc cctcccagac cttctcggca
     1801 aagctcgccg tcgcgctcgc gtgcggcgcc ctgggtggca tcgccgcctt cgccgccggc
     1861 ggctgcggcg aggaccgcgg ctcctcgggc accggcaccg gcggcaccgg cacgggcact
     1921 ggagagacac atccgagcac cacgccgagc accacgccga ccaccgagtc gacgcccacc
     1981 acgaccacca agtagcccga tgcgcgtctg cgtgaccggc gggctcggct tcgtcggcgc
     2041 ccatctgtgc cggctcctcg ccgggcgcgg ccacgaggtc gtctgcgtcg atcgcctcag
     2101 cggccactac gcgccgggct ccggcgcgga tgccgcggcc gagctcgact cgctcggcgt
     2161 ggaggtggtg cgcgcggacg cggcggaccc gctcgcgctc gcgctcgtcc cgggctgcca
     2221 cgccgtggtg cacctggccg cgctgccagg cgtgcgcgcg cgccactcgc tgcgcacgct
     2281 ttgggagggg accgtggcgg tcacggccgc cgt
//
LOCUS       DASSYW010000244         2800 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_538896, whole genome shotgun sequence.
ACCESSION   DASSYW010000244 DASSYW010000000
VERSION     DASSYW010000244.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2800)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2800)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2800
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_538896"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1420
                     /locus_tag="VFN38_03820"
     CDS             <1..1420
                     /locus_tag="VFN38_03820"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HET9010912.1"
                     /translation="QQLSLEGGLFPHWRDSVTAELASGNRIITFDTRTNKADTVSLTL
                     RVPKRVPTGSVAFTGARILTMEDRRVIPSGTVVVKGGRIACIGECSAAGAQVIDATGK
                     TIMPGLIDLHAHHHRDHEGVLPRKNWESAIYMAYGVTTTLDNSMWSGNVFPTAQMIET
                     GMMIGPRTFSTGDPLYAGDAQRQNDLTSLAVTEQNVRRLQSWGAVTMKQYTQPRRDQR
                     QWVSDAARRFGLRVTAEGGDIEYNLSMIMDGQTGWEHPWGNVPIYADVAKFFGKAHAF
                     YSPTFMVAGPSSWNEDYWYAESDVFRDPKLQSWTPWQMLIPQTRRRMLRPATDYSFPL
                     LARGLADIIAEGGFGTIGSHGQQHGIGSHWEVWMAASALGPMGALEVGTIDGARFIGI
                     DKETGSLAVGKLGDLLVLDGNPLDDIRQTRNIRYVVKGGIVYDAMTLDEVWPAKTTFG
                     AHWWVNPDALKADRKDITPGRP"
     gene            1417..2691
                     /locus_tag="VFN38_03825"
     CDS             1417..2691
                     /locus_tag="VFN38_03825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010913.1"
                     /translation="MTSGTMRSFVLAAIVLSCAACRGGTSSQSGDYLFVWAGDSAGKS
                     SDFLAVIDAAPSSPTYGAVVASQPTGMAGTHPHHTEAELGPNDHLLANGFHAGRTWLY
                     DLSAPREPKIVTSFGDVAGFSHPHTYVRLPNGHVLATFQYRADSAAPSPAGIHEHDSA
                     SARAAHTTGGLVEMDERGTVIRSASASDSAIPDRYIYPYAVLPIEGIDRAVSTTTDMD
                     EANKKATSEWVQLWRLSDFKLLRSVALQPGPRGDEHQFSGEPRLLPDGKSVYIHTFNC
                     GLYLLRGVDGNEPSAVFVKGFEGKNCGVPVLAGHFWLQTVPEAHALVALDISDAEHPR
                     EVSTLKLGDDEQPHWLAIDRSGRRLVLNSAGAGTSNRLYVIELDPATGALTLDDRFRD
                     AGASRPGVRMSQKTWPHGFTGTAWPHGTVFSR"
BASE COUNT          472 a          941 c          961 g          426 t
ORIGIN      
        1 gcagcagctc tcgctcgagg gtgggctctt tccccactgg cgcgacagcg tgacggcgga
       61 gctcgcgagc ggcaaccgga tcatcacgtt cgacacgcgg acgaacaagg ccgacacggt
      121 gagcctgacg ctgcgcgtcc cgaagcgcgt gccgacgggc tcggtggcat tcacgggcgc
      181 gcgcatcctg acaatggagg atcgccgcgt catcccgagc ggcacggtcg tcgtgaaggg
      241 cggccggatc gcgtgcatcg gtgagtgcag cgccgcgggc gcgcaggtca tcgatgcaac
      301 gggcaagacg atcatgcccg gcctcatcga cctgcacgcg catcaccatc gcgaccacga
      361 aggcgtgctg ccgaggaaga actgggagtc cgcgatctac atggcgtacg gcgtgacgac
      421 cacgctcgac aactcgatgt ggtcgggcaa tgtcttcccg acggcgcaga tgatcgagac
      481 ggggatgatg atcggcccgc gcacgttcag cacgggcgat ccgctctacg ccggcgacgc
      541 gcagcgccag aacgacctga cgtcgctcgc cgtgacggag cagaacgtca ggcgcctgca
      601 gtcgtggggc gcggtgacga tgaagcagta cacacagccg cggcgcgacc agcgacagtg
      661 ggtgagcgac gccgctcggc gcttcggcct tcgcgtcacg gcggagggcg gcgacatcga
      721 gtacaacctc tcgatgatca tggacgggca gaccggctgg gagcacccat ggggcaacgt
      781 gccgatctac gccgacgtcg cgaagttctt cggcaaggcg cacgcgttct acagcccgac
      841 gttcatggtg gccggcccgt cgtcgtggaa cgaggactac tggtacgcgg agagcgacgt
      901 gttcagggac ccgaagctgc agtcgtggac gccgtggcag atgctcatcc cgcagacgcg
      961 acgccgcatg ctgcggccgg cgacggacta cagctttccg ctgctcgcgc gcggcctcgc
     1021 cgacatcatc gccgaaggcg gcttcggaac catcggatcg cacggccagc agcacgggat
     1081 cggctcccac tgggaagtgt ggatggccgc gtccgcgtta ggccccatgg gcgcgctcga
     1141 ggtcgggacg atcgatggtg cgcgcttcat cgggatcgac aaggagacgg gctcgctcgc
     1201 ggtcggcaag ctcggcgacc tgctcgtgct ggacggcaat ccgctcgacg acatccggca
     1261 gacgcggaac atccgctacg tggtgaaggg cgggatcgtc tacgacgcga tgacgctcga
     1321 cgaggtgtgg ccggcgaaga cgacgttcgg cgcgcactgg tgggtgaatc ccgatgcgct
     1381 caaggcggac aggaaggaca tcacaccggg tagaccatga cctcaggaac catgcgctcg
     1441 ttcgtcctcg cggcaatcgt cctctcgtgc gcggcctgtc gcggcggcac ctcgtcgcag
     1501 tcgggcgact atctgttcgt ctgggcgggc gattcggccg ggaagtcgag cgatttcctc
     1561 gcggtgatcg acgcagcgcc gtcgtcgccg acctacggcg ccgtcgtcgc ctcgcagcca
     1621 accggcatgg ccggcacgca tccgcaccac accgaagcgg agctcgggcc taacgatcat
     1681 ctcctcgcga acggctttca cgccggacgc acctggctgt acgacctctc cgctccccgc
     1741 gagccgaaga tcgtcacctc gttcggagac gtcgcgggct tcagccaccc gcacacgtac
     1801 gtcaggctgc ctaacgggca cgtgctggcg acgttccagt acagggcgga ttcggccgcg
     1861 ccgtcgccgg ccggcatcca cgagcacgat tccgcgtcgg cccgcgccgc tcacaccacc
     1921 ggcggcctgg tggagatgga cgagcggggc accgtgatcc ggagcgcgag cgcgagcgac
     1981 tcggcgattc ccgacaggta catctacccg tacgccgtcc ttccgatcga gggcatcgat
     2041 cgcgccgtct cgacgacgac ggacatggac gaggccaaca agaaggcgac gtccgaatgg
     2101 gttcagctgt ggcggctctc cgacttcaag ctcctccgca gtgtcgcgct ccagcctggg
     2161 ccacgaggcg atgagcacca gttctcgggg gagccgcgtc tcctgccgga cggaaagagc
     2221 gtctacatcc acacgttcaa ctgcgggctg tatctcctgc gtggcgtgga cggcaacgag
     2281 ccgagtgcgg tgttcgtgaa ggggttcgag gggaagaact gcggcgtgcc ggtgctcgcc
     2341 ggccacttct ggctgcagac cgtaccggag gcgcacgcgc tggtcgcgct cgacatcagc
     2401 gacgccgagc atcctcgcga agtctcgaca ctgaagctcg gtgacgacga gcagccgcac
     2461 tggctcgcga tcgatcgttc cggccgccgc ctcgtgctga actccgcggg tgccgggacc
     2521 agcaaccggc tctatgtcat cgagctcgat ccggcgactg gtgcgctcac gctcgatgac
     2581 cgctttcgcg atgcgggcgc gtcccgcccc ggtgtccgga tgagccagaa gacctggccg
     2641 cacggcttca ccggcacggc gtggccccac ggcacagtgt tctcgcgtta ggccgcgctc
     2701 gctccgaggt cgcttgccgc gcgcgacgct cagcgcacgc gcgtgaaccg gatgtcgcgg
     2761 cttcgctcgt cgatgtagac gctcagtccg gcgactcggc
//
LOCUS       DASSYW010000245         2325 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1187399, whole genome shotgun sequence.
ACCESSION   DASSYW010000245 DASSYW010000000
VERSION     DASSYW010000245.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2325)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2325)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2325
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1187399"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(84..1463)
                     /locus_tag="VFN38_03830"
     CDS             complement(84..1463)
                     /locus_tag="VFN38_03830"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HET9010914.1"
                     /translation="MRALLKFLLVVVLLAAVCLGGAWWWAGRMSGPSIDLKQPGRFVG
                     QSTSLELTLQAPEGLFSHASVTLSQNGVNHDVFTLEPQAANAKKEAADKIYVIKPIGR
                     KAIPDLRSGSARITVRAARPVLYGLRERETVVTHDVQVRLEPPQLGVLSQFHFINHGG
                     SEFVVYRATPEDVTSGVRVGDKEYPGYPAKGAGITSDPALRVAFFALLFDQPLDTPIH
                     VFARDEAGNEAVATLDSRVFPKAYQKSRIEIDDRFLNRVVPAIAGNTPSIEVPAGDAL
                     AGFLKINGDLRRENNAYIASLAKKSSPDLLFRDAFQQLGDSQVEAKFADTRTYVYKGK
                     DVDQQVHLGFDLAVTANVPIKAAQKGVIVHAAYLGIYGNCVIVDHGMGVQSLYGHLST
                     IDVKVGDRVEKGQVLGKSGMTGLAGGDHLHFTMLVGGQQVTPVDWWSQQWMEDRVLRK
                     IKAAGGPAS"
     gene            1596..2060
                     /locus_tag="VFN38_03835"
     CDS             1596..2060
                     /locus_tag="VFN38_03835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010915.1"
                     /translation="MKRTSEATLVERAGFLYRQLLLLQRVFPDASEDSRSLPFGDDGD
                     ARSLCYGVREVLNQLAEDARVLTSVPVPIANWRPGDTADDERWRALTEIERREIASLL
                     AGYETLLTLIEHEPFRNTAEARETLQVERARLARFRQEMGFLDRRRPTAVVS"
     gene            complement(2041..>2325)
                     /locus_tag="VFN38_03840"
     CDS             complement(2041..>2325)
                     /locus_tag="VFN38_03840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010916.1"
                     /translation="WEGDTLVVESTNFRDEGWLDVNGAPLTTEGKLIERFRRVNMGRL
                     EIDVTIDDPKAYTRPWTVRVNQRLLADTDLIEFVCNENELFQPWLKRQQP"
BASE COUNT          342 a          797 c          774 g          412 t
ORIGIN      
        1 cgcataacag ctaattatta ccgatggctc ccggctcccg gctcccggct cccggctccc
       61 ggctcccggc tcccggctcc cggctaggag gccgggccgc cggcggcctt gatcttccgg
      121 aggacccggt cctccatcca ctgctggctc caccagtcca ccggcgtcac ctgctggccg
      181 ccgacgagca tcgtgaaatg caggtggtcg ccgcccgcca ggccggtcat gccgctcttg
      241 cccagcacct gccctttttc cacgcgatcg cccaccttca cgtcgatcgt cgagaggtgc
      301 ccgtagagcg actgcacccc catgccgtgg tccacgatca cgcagttgcc gtagatcccc
      361 aggtaggcgg cgtggacgat gacgcctttc tgcgccgcct tgatcggcac gttggcggtg
      421 accgccaggt cgaacccgag gtgcacctgc tggtccacgt cctttccctt gtagacatag
      481 gtgcgcgtgt cggcgaactt ggcctccacc tgcgagtcgc ccagctgctg gaacgcgtcc
      541 ctgaacagca gatccggcga cgacttcttc gcgaggctcg cgatgtaggc gttgttctcg
      601 cgccgcaggt cgccgttgat cttcaggaag cccgcgagcg cgtcgccggc cggcacctcg
      661 atcgacggcg tgttgccggc gatggccggg accacgcgat tcaggaagcg gtcgtcgatc
      721 tcgatgcggc tcttctgata cgccttcggg aacacgcggc tatcgagggt cgccaccgct
      781 tcgttgcccg cttcgtcgcg cgcgaacacg tggatgggcg tgtcgagcgg ctggtcgaag
      841 agcagggcga agaaggcgac gcgcagcgcc gggtcgctcg tgatgccagc ccccttggcg
      901 gggtagcccg gatactcctt gtcgcccacc ctgacgcccg acgtgacgtc ctcgggcgtc
      961 gcgcggtaga ccacgaactc gctgccgccg tggttgatga aatggaactg ggagaggacg
     1021 cccagctgcg gcggttcgag ccgtacctgc acgtcgtggg tgacgacggt ctcccgctcc
     1081 cgcaggccgt agagcaccgg ccgggcggcc cgcaccgtga tgcgcgcgga gcccgaccgg
     1141 aggtcgggga tcgccttccg gccgatcggc ttgatgacgt agatcttgtc ggccgcctct
     1201 ttcttggcgt tcgcggcctg gggttccagc gtgaacacgt cgtggttcac gccgttctgc
     1261 gacagcgtga cgctggcgtg cgagaagagc ccttcgggcg cctgcagcgt cagctccagc
     1321 gacgtggact gcccgacgaa acggccgggc tgtttcagat cgatcgaggg gccgctcatg
     1381 cggccggccc accaccaggc accgcccagg cacacggcgg cgagaaggac gacgaccagc
     1441 aggaacttca gcaaggctcg catccctgcg atgatagcag tcatgtccgg ctagcatttc
     1501 gtgtgcttct ccaggggatt cccgggcgcg cggcgtcgag acgctgagtt aagctgccgc
     1561 tgcagccttt cgtttccgcc agtgtgaggt gcccgatgaa gaggacctcc gaagcgacgc
     1621 tcgtcgaacg agcggggttc ctgtaccggc aactgctcct gctgcagcgc gtgttccccg
     1681 atgccagcga ggactcgcga tcccttccct tcggcgacga cggcgacgcg cgctcgctct
     1741 gttatggggt gcgcgaggtc ttgaaccagc tcgcggaaga cgcccgcgtg ctcacgagtg
     1801 tgccggtgcc gattgcgaac tggcggccgg gagacacggc cgacgacgag cgctggcggg
     1861 cgctcaccga gatcgagcgc cgcgagatcg cgtcgctgct ggccggttac gagacgctgc
     1921 tgacgctcat cgagcacgag ccgttccgca acaccgccga ggcgcgcgag accctgcagg
     1981 tcgagcgggc gcggctggcg cggttccgcc aggagatggg tttcctggat cgccgccggc
     2041 ctacggctgt tgtctcttga gccagggctg gaacagctcg ttctcgttgc agacgaactc
     2101 gatcagatcg gtgtcggcca gcaggcgctg attcacgcgc accgtccacg gcctcgtgta
     2161 ggccttcggg tcgtcgatgg tgacgtcgat ttcgagccgc cccatgttga cgcgccggaa
     2221 gcgctcgatc agcttcccct cggtggtgag cggcgcgccg ttgacgtcga gccacccctc
     2281 gtcgcggaag ttggtgctct ccaccaccag cgtgtcacct tccca
//
LOCUS       DASSYW010000246         2344 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1792590, whole genome shotgun sequence.
ACCESSION   DASSYW010000246 DASSYW010000000
VERSION     DASSYW010000246.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2344)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2344)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2344
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1792590"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            50..1174
                     /locus_tag="VFN38_03845"
     CDS             50..1174
                     /locus_tag="VFN38_03845"
                     /EC_number="2.7.1.170"
                     /inference="COORDINATES: protein motif:HMM:NF007139.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009254 - peptidoglycan turnover [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HET9010917.1"
                     /translation="MSPPSGSASGARELFIGLMTGTSLDGVDAVLADCAPRVPYTLAH
                     VHTALPPALRSALLALNRSGADEIHRSQVAAQELARLYAATALALLDAGGVKAGDVRA
                     IGAHGQTVRHRPELGYTVQVNAPALLAELTGIDVVADFRSRDVAAGGQGAPLVPAFHR
                     LVFGSDRPRVVVNVGGISNITALDGERVIGFDAGPGNVLIDGWMAAHFAAAFDAGGAL
                     AATASPDEDLVAALMNDPYFAAPPPKSTGRDLFTLDWMHAVPRVRQLDAKVVLASLTE
                     LTARAIGDAVVRWVPRAEDVVVCGGGAHNATLMRALQRCVGATRPVRTAAELNVPVDQ
                     VEALAFAWLAACHLHRRTGNVPEATGARGPRVLGALYPAA"
     gene            complement(1236..1586)
                     /gene="erpA"
                     /locus_tag="VFN38_03850"
     CDS             complement(1236..1586)
                     /gene="erpA"
                     /locus_tag="VFN38_03850"
                     /inference="COORDINATES: protein motif:HMM:NF010147.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster insertion protein ErpA"
                     /protein_id="HET9010918.1"
                     /translation="MNAAVEMPSPLNFTDAAAAKVKSLIDEEGNPELKLRVFVQGGGC
                     SGFQYGFTFDEVINEDDATMVKNGVTLLIDSMSYQYLTGAEIDYKEDLEGAQFVIRNP
                     NATTTCGCGSSFSV"
     gene            complement(1654..2073)
                     /locus_tag="VFN38_03855"
     CDS             complement(1654..2073)
                     /locus_tag="VFN38_03855"
                     /inference="COORDINATES: protein motif:HMM:NF016408.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymer-forming cytoskeletal protein"
                     /protein_id="HET9010919.1"
                     /translation="MFGNKTTTAQKTIGTLIGAGTVVEGTVTYSGGLRIDGTVKGDVR
                     GTSGDACMVVISEHGKVEGEVHAAHLVVSGAVNGPLHVSQLLELQPKARITGDVHYHG
                     LEIHHGAVVEGRLIYSAAAGEGRPPLKLAAGGTTSDN"
     gene            complement(2082..>2344)
                     /locus_tag="VFN38_03860"
     CDS             complement(2082..>2344)
                     /locus_tag="VFN38_03860"
                     /inference="COORDINATES: protein motif:HMM:NF042896.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF6776 family protein"
                     /protein_id="HET9010920.1"
                     /translation="VQQSGRPERDFTGAVSLTVTLQQGGRPWVLQLPDPALPSAGPAP
                     LSFRHYQRLEGTFSVPAGAAVRSVLVRIHSDGETRAQQTFTM"
BASE COUNT          351 a          825 c          769 g          399 t
ORIGIN      
        1 cctgctcgag cgcgtcaccg tggcccagtc cacggcgcgc tgatcccgca tgtcgccccc
       61 gagcggctcc gcgagcggcg ctcgggaact cttcatcggc ctgatgaccg gcaccagcct
      121 cgacggcgtg gacgccgttc tcgccgattg tgctccgcgc gtgccgtaca ccctggcgca
      181 cgtccacact gcgctgcccc cggcacttcg gtccgccttg ctggcgctga accgcagcgg
      241 cgccgacgag atccatcgca gccaggtcgc cgctcaggaa cttgcacggc tctacgccgc
      301 aacggccttg gcgctgctcg acgccggcgg ggtcaaggca ggcgatgtgc gcgcgatcgg
      361 agcgcacggg cagacggtcc gccaccgtcc tgaactcggg tacaccgtgc aggtcaatgc
      421 tcccgcgctt ctcgcggagc tgaccggcat cgacgtcgtg gctgatttcc gcagccggga
      481 cgtcgccgcg ggtggccagg gcgccccgct ggttccagcg tttcatcgcc tcgtgttcgg
      541 cagcgaccgg ccgcgggtgg tcgtgaacgt cggcggcatc agcaacatca ccgccctcga
      601 cggcgagcgg gtgatcggct tcgacgccgg gcccggcaac gtcctgatcg acggctggat
      661 ggcggcgcac ttcgctgccg ccttcgatgc cggcggcgcg ctggcggcga cggcgagccc
      721 ggacgaagac cttgtcgccg ccctgatgaa cgacccctac ttcgctgcgc ctccgcccaa
      781 gagcaccgga cgggacctgt tcacgctcga ctggatgcac gcggtgccgc gtgtgcggca
      841 gctcgatgcc aaggtggtgc tcgcctcact gaccgaactc accgcgcgcg cgatcggcga
      901 cgccgtcgtg cgctgggttc cgcgcgccga ggatgtcgtc gtctgcggag gcggcgcgca
      961 caacgccacc ctgatgcgcg ccttgcagcg ctgcgtcggt gcgacacggc cggtgcgaac
     1021 ggcggccgag ttgaacgtgc ctgtcgacca ggtcgaggcc ctcgccttcg catggctcgc
     1081 cgcgtgccac ctccaccgca ggacaggcaa cgtgcctgaa gcaacgggcg cccgcggtcc
     1141 gcgcgtgctg ggcgcgctct atccggccgc gtgagcggcc caacgccggg caaaaaaagg
     1201 gggcgctcga agcgccccct ttcattccat ccgcgtcaga ccgagaacga cgacccgcaa
     1261 ccgcacgtcg tggtggcatt cggattacgg atcacgaatt gcgcgccctc gaggtcttcc
     1321 ttgtagtcga tctcggcgcc cgtcaggtac tggtagctca tcgagtcgat gagcagcgtg
     1381 acgccgttct tgaccatcgt tgcgtcgtct tcgttgatca cttcatcgaa ggtgaagccg
     1441 tactggaaac ctgaacagcc gccgccctgc acgaacacgc gcagcttgag ctcggggttg
     1501 ccttcctcgt cgatcagcga cttcaccttc gccgccgcgg cgtcggtgaa gttcagcggt
     1561 gagggcatct cgacagcagc gttcatgtcc atttctccag gaagaatgct tggcccgatt
     1621 ataggtaagg ggagcgctcg cggctgaccg cgatcaattg tcagaggtgg taccgccggc
     1681 ggccagtttc aagggaggcc gcccctcgcc ggccgcggcg ctgtagatca gccggccttc
     1741 gaccacggcg ccatgatgga tttccaatcc gtggtaatgc acatcgcctg tgatcctcgc
     1801 cttcggctga agttccagca actgggagac gtggagggga ccattcacag cgccggagac
     1861 gacaaggtga gcggcgtgga cctccccttc gaccttgccg tgctcgctga tgaccaccat
     1921 gcacgcgtcg ccggacgtgc cgcgcacgtc gcctttcacc gtgccgtcga tgcgaagccc
     1981 gccgctgtac gtgacggtgc cttcgaccac ggtgccggct ccgatgagcg taccgatcgt
     2041 cttctgggcg gtggtcgtct tgtttccgaa catggcatct cctacatcgt gaatgtctgc
     2101 tgcgcgcgcg tctcgccgtc gctgtggatc cgcacgagga ccgaacgcac cgccgcgccc
     2161 gccggcaccg agaaggtgcc ctccaagcgc tgatagtgtc ggaacgacag cggcgcgggg
     2221 cccgcgctgg gcagggccgg gtcgggcaac tgcagaaccc atggccggcc gccttgctgc
     2281 agtgtcacgg tcaagctcac cgcgcctgtg aagtcgcgct ccggccgtcc gctctgctgc
     2341 acca
//
LOCUS       DASSYW010000247         2212 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_725130, whole genome shotgun sequence.
ACCESSION   DASSYW010000247 DASSYW010000000
VERSION     DASSYW010000247.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2212)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2212)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2212
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_725130"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            313..1014
                     /locus_tag="VFN38_03865"
     CDS             313..1014
                     /locus_tag="VFN38_03865"
                     /inference="COORDINATES: protein motif:HMM:NF015658.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF305 domain-containing protein"
                     /protein_id="HET9010921.1"
                     /translation="MTTAMTASLARRFAATLVAAAATAACGGATGSGAAAPPQPASAE
                     QGQAAAIARARADSARYPYTAADVHFMSAMIHHHAQAIAMSRLAPTHGADAAVIRLAD
                     RIINAQQDEIATMQKWLGDRGQRVPEATPGPMKMTMGGMEHEMLMPGMLTADEMKQLD
                     EARGKEFDRRFLASMIRHHRGAVSMVQELFGTYGAAQDEIVFKFANDVNVDQTTEIAR
                     MERMLAALTLGISAP"
     gene            1038..>2212
                     /locus_tag="VFN38_03870"
     CDS             1038..>2212
                     /locus_tag="VFN38_03870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010922.1"
                     /translation="MHRSSPFLKLALALALALVVSSACAGTATSATSAPTPAGDLSAA
                     PSPDPRVGLRAGLMDAAEATWNMRVVSRNAPPASFRGITNSDLAFLGNYAIQGNYNGY
                     QVWDISNPASPTVKTAYVCPASQSDVSVYRNLLFVSGEGLSGRLDCGTQGVKDTVSKE
                     RLRGLRIFDISDIANPRNVGNVQTCRGSHTHTVLVDPKDAENVYVYISGSSGVRSPNE
                     LPGCVSADPAKDPNSALFRIEVIKVPLAHPERAAIVSSPRIFNDLTAPPRHGEAPEDV
                     AAAARRAAAARARGEFTVMFQGVDNVLSSAFVQPMLDSIVKARGGTTVTGADSAALRA
                     ALPGIVQKMFGDPAAHAGPAPGPTQCHDITVYPAIGLAGGACGGYGLLLDIRDPANPR
                     "
BASE COUNT          344 a          821 c          744 g          303 t
ORIGIN      
        1 aaatgggggc cgtcgacccg ccatttccgc ctcgattcgt cggaggacac gatgaacgcg
       61 cccttcgtgg tgccgacgag aacgacgacg tcgccggcgg agtagcgtga cgtggtgcgt
      121 gacatggcca tggcgactct cctttgcagg cgggcagcct caacggtgcg cgacggcgga
      181 ccgcagcgca atatgacccc ttcccgaccc cgcccggcat cccccctgca gcttcacccc
      241 gccagccgac tatctatcgt ggactcgtcg gatgaccggg gaagtgcgcg ggtcgagcca
      301 ccagcagccc tgatgaccac tgcaatgact gcctcacttg cacgcaggtt cgccgccacg
      361 ctcgtggccg cggccgccac ggccgcctgc ggcggcgcca ccgggagcgg ggcggccgcc
      421 cctccccagc cggcctccgc cgagcaggga caggcggcgg ccatcgcgcg cgcgcgcgcc
      481 gacagcgcgc gctatccgta caccgcggcg gacgttcact tcatgtccgc gatgatccac
      541 catcatgcgc aggcgatcgc gatgtcccgc ctggcgccca cgcatggcgc cgacgccgcg
      601 gtgatccggc tcgccgaccg gatcatcaac gcgcagcagg acgagatcgc cacgatgcag
      661 aaatggctgg gcgaccgtgg ccagcgggtg ccggaggcga cgccgggtcc gatgaagatg
      721 acgatgggcg ggatggagca tgagatgctg atgcccggca tgctcaccgc cgacgagatg
      781 aagcagctcg acgaggcgcg ggggaaggag ttcgaccggc gcttcctcgc gtccatgatc
      841 cggcatcacc gcggcgccgt gtccatggtg caggagctgt tcgggaccta cggcgccgcg
      901 caggacgaga tcgtgttcaa gttcgccaac gacgtcaacg tcgatcaaac caccgagatc
      961 gcgcgcatgg aacggatgct cgccgctctc acgctcggga tctccgcgcc atgaccaccc
     1021 ttaccgcgat ggttcacatg catcgatcct ctccgttcct gaagctcgcg ctcgcgctcg
     1081 cgctcgcgct cgtcgtctcg tccgcgtgcg ccggcacggc gacgtcggcc acgagcgcgc
     1141 cgacgcccgc gggcgacctg tccgccgccc cgagcccgga tccgcgcgtc ggactgcgcg
     1201 ccggcctgat ggatgccgcc gaggcgacct ggaacatgcg cgtggtgtcc cgcaacgcgc
     1261 cgccggcgag cttccgcggc atcaccaact ccgatctcgc cttcctgggc aactacgcca
     1321 tccagggcaa ctacaacggc taccaggtgt gggacatctc gaacccggcc agcccgacgg
     1381 tgaagacggc gtacgtgtgc cccgcctcgc agagcgacgt gtcggtgtac cgcaacctgc
     1441 tgttcgtctc gggcgagggg ctcagcgggc gcctcgactg cggcacgcag ggggtgaagg
     1501 acaccgtgag caaggagcgg ctgcgcgggc tgcgcatctt cgacatcagc gacatcgcca
     1561 acccgcggaa cgtcggcaac gtgcagacct gccgcggctc gcacacccac acggtcctcg
     1621 tggacccgaa ggacgcggag aacgtctacg tctacatctc cggttcgtcc ggcgtccggt
     1681 cgccgaacga gcttcccggc tgcgtgagcg ccgacccggc caaggatccc aactcggcgc
     1741 tgttccgcat cgaggtgatc aaggtgccgc tggcgcatcc ggagcgggcg gcgatcgtca
     1801 gctcgccgcg catcttcaac gatctcacgg cgccgccccg ccacggcgag gcgccggagg
     1861 acgtcgccgc cgccgcacgg cgggccgcgg cggcgcgcgc gcggggtgag ttcaccgtga
     1921 tgttccaggg cgtggacaac gtcctctcgt ccgccttcgt ccagccgatg ctcgacagca
     1981 tcgtgaaggc ccgcggcggg acgaccgtca ccggcgccga cagcgccgcg ctgcgcgcgg
     2041 cgctcccggg catcgtgcag aagatgttcg gcgacccggc cgcccacgcg ggccccgcgc
     2101 cgggccccac ccagtgccac gacatcaccg tgtacccggc gatcgggctg gcgggcggcg
     2161 cctgcggcgg ctacggcctc ctcctcgaca tccgcgaccc ggcgaacccg cg
//
LOCUS       DASSYW010000248         2052 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_297443, whole genome shotgun sequence.
ACCESSION   DASSYW010000248 DASSYW010000000
VERSION     DASSYW010000248.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2052)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2052)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2052
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_297443"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..657
                     /locus_tag="VFN38_03875"
     CDS             <1..657
                     /locus_tag="VFN38_03875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010923.1"
                     /translation="VTDLRADSAFARAAEIAAQGIAKFPRNARLYLFKAQNERSAGQL
                     PAAKASLDRALEVDPKIAGANMLKAQLCYDMGDFACTAASVKADVAADASNKERDAAF
                     LLGYGSTLYKKGVESKKAEDYKKAIPLIQASDEIAPSANAKFLLAVSAFQALAAGSAD
                     LQKSKNCQDYKDANDLLTLVNVNMPAGGSVDPNTAKQILGAAPQFQAFIDGSIKKYCK
                     "
     gene            complement(748..1659)
                     /locus_tag="VFN38_03880"
     CDS             complement(748..1659)
                     /locus_tag="VFN38_03880"
                     /inference="COORDINATES: protein motif:HMM:TIGR00147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0001727 - lipid kinase activity [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YegS/Rv2252/BmrU family lipid kinase"
                     /protein_id="HET9010924.1"
                     /translation="MPPIRKHITYIVHGARADHAELRQMVSWVRERGHAVDVRITWNA
                     GDAEALAAEAADRGTDVVVACGGDGTLNEVVNGLDGRDVPLGVVPLGTANDFARQTGI
                     PEDADHAMDVILRRKPVRIDTASMNGRRFLNVSTGGVGAEATAETPADFKASLGPLAY
                     AITAIRKLAGDQSRHASFSSAGFDLDVDFLAFAVGSARVTGGGTMMTPDASVTDGLLD
                     LCVIEAMSRRDFAMLSLQVKKGEHVGLPGVHYAQLPWLKVTGTEPLSVNLDGEGVEAK
                     VCDYRARRADLLVHVQHLPGEEGGTTG"
     gene            1721..>2052
                     /gene="mraW"
                     /locus_tag="VFN38_03885"
     CDS             1721..>2052
                     /gene="mraW"
                     /locus_tag="VFN38_03885"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: protein motif:HMM:NF013919.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytosine(1402)-N(4))-methyltransferase"
                     /protein_id="HET9010925.1"
                     /translation="MRGRALNDSLPPTRAWDSEYHAPALVAPVVQLMAGSPLVLDGTL
                     GGGGHSAALLDAGVQRVIGIDRDADALASATARLDDAVRAGRFTALQGNYAALGDLPL
                     GDLHFTGIL"
BASE COUNT          314 a          733 c          705 g          300 t
ORIGIN      
        1 gtcaccgacc tgcgagccga cagcgcgttc gcccgcgcgg cggagatcgc ggcgcagggc
       61 atcgccaagt tcccccgcaa cgcgcggctc tatctcttca aggcgcagaa cgagcgctcg
      121 gccggccagc tcccggcggc caaggcctcg ctcgaccgcg cgctcgaggt ggatccgaag
      181 atcgccggcg ccaacatgct gaaggcgcag ctctgctacg acatgggcga cttcgcgtgc
      241 accgcggcgt cggtcaaggc ggacgtcgcc gccgacgcga gcaacaagga gcgcgacgcg
      301 gccttcctgc tcggctacgg cagcacgctg tacaagaagg gcgtcgagtc caagaaggcg
      361 gaggactaca agaaggccat tccgctcatc caggcctccg acgagatcgc accgagcgcc
      421 aacgccaagt tcctgctcgc cgtgtcggcc ttccaggctc tcgcggccgg ctcggcggat
      481 ctccagaagt cgaagaactg ccaggactac aaggacgcga acgacctgct gacgctggtc
      541 aacgtgaaca tgcccgccgg cggctcggtg gacccgaaca cggccaagca gatcctcggc
      601 gcggccccgc agttccaggc cttcatcgac gggtcgatca agaagtactg caagtaggtg
      661 caggatgacg gtctgacgga atgaccgagg acgggaaggg cacatcgggc gcatgccgat
      721 gtgcccttcg tcgttcccgt cgtttcgtca gcccgtcgtc ccgccttcct ctcccggcag
      781 gtgctgcacg tgcaccagca ggtccgcgcg ccgggcgcgg tagtcgcaga ccttcgcttc
      841 caccccctcg ccgtcgaggt tcacgctcag cggctccgta cccgtgacct tgagccaggg
      901 gagctgcgcg tagtgcaccc ccggcagtcc cacgtgctcg cccttcttca cctgcagcga
      961 gagcatcgcg aagtcgcggc gcgacatcgc ctcgatcacg cagaggtcga ggaggccgtc
     1021 ggtgacgctg gcatccggcg tcatcatcgt gccgcccccg gtcaccctcg cgctccctac
     1081 cgcgaacgcc aggaagtcca cgtccaggtc gaagccggcg ctcgagaacg acgcgtgccg
     1141 cgactgatcc ccggcgagct tgcggatcgc cgtgatcgcg tacgcgagcg gtcccaggga
     1201 ggccttgaag tcggccggcg tctccgccgt cgcctcggcg ccgacgccgc cggtggagac
     1261 gttgaggaac cggcggccgt tcatggacgc cgtatcgatg cgcacgggct tgcgacggag
     1321 gataacatcc atggcatgat cggcgtcctc cggaattccc gtctgccgcg cgaagtcgtt
     1381 ggccgtgccg agcggcacga cgccgagggg cacgtcacgc ccgtcgagac cgttgacgac
     1441 ctcgttcagc gtgccgtcgc ccccgcacgc caccaccacg tcggtgccgc ggtcggccgc
     1501 ctcggccgcg agcgcctcgg cgtcgccggc gttccaggtg atccggacgt ccacggcgtg
     1561 cccgcgctcg cgaacccagg agaccatctg tcgcagctcg gcgtggtcgg cacgggcgcc
     1621 gtgcacgatg taggtgatgt gcttccgaat cgggggcatg cgaggagtgc gggatggagc
     1681 ggggccgcag gactgccgtg ccgcgcgagt gtcgcatagt atgcgtggcc gcgcgctgaa
     1741 cgacagcctc ccgcccacgc gcgcgtggga ctcggagtat cacgcgccgg ccctggtggc
     1801 gcccgtggtg cagctcatgg ccggctcccc gctcgtgctg gacggcacgc tgggcggcgg
     1861 tgggcacagc gcggcgctcc tcgacgcggg ggtgcagcgc gtcatcggca tcgaccgcga
     1921 cgccgatgcg ctcgcctcgg ccacggcgcg gctggacgat gccgtgcggg cggggcgctt
     1981 cacggcgctg cagggcaact acgcggcgct cggcgatctg ccgctcggcg atctgcactt
     2041 caccggtatc ct
//
LOCUS       DASSYW010000249         3570 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1164989, whole genome shotgun sequence.
ACCESSION   DASSYW010000249 DASSYW010000000
VERSION     DASSYW010000249.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3570)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3570)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3570
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1164989"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..726)
                     /locus_tag="VFN38_03890"
     CDS             complement(<1..726)
                     /locus_tag="VFN38_03890"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HET9010926.1"
                     /translation="MTGFVRRVTRGVAVAALCASPLAACLAQIPASLVGVVRDSAGIP
                     IPGVEVRFRGADFVSVRTNDSGGFRMVNLPTGLASVTLRRMGFAPASAEVRLRSGRTD
                     SLVFSLTALATTLAGVLVEDEYEARSHRLLAGFWERRSRGFGYFLTRDEIEKRDAHEF
                     TDLMRRVPSVTIGTRNGRPTIRFNHGTNVRDCPPQYVVDGMRIENGSPDEFTPQDVEA
                     IEMYSGPATIPPQFAPRFNSYTCG"
     gene            complement(776..2983)
                     /locus_tag="VFN38_03895"
     CDS             complement(776..2983)
                     /locus_tag="VFN38_03895"
                     /inference="COORDINATES: protein motif:HMM:TIGR00733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0035673 - oligopeptide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006857 - oligopeptide transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide transporter, OPT family"
                     /protein_id="HET9010927.1"
                     /translation="MTTPSTHTTPGTTFSPYVPATEAPREFSIGAIVLGVLLGLVFAA
                     SSIYLALKVSLTVSASIPIAVLSITIFRYVSRAFGIQPATILQNNLVQTTGSAGESIA
                     AGIAFTLPALLLLGYELPWTKVMAIGIVGGILGVLFLVPIRRSLIVKEHGNLKYPEGT
                     ACAQVLIVGEERGVQAKTVFMGFGLGAAYKFLNAGLHLFLEVPRRAFTSVLANGQTQL
                     FGEIQAEISPELTGVGYIIGPRIAGFLFAGGVLSFFCLIPAIKLFGAGLAEPIFPATI
                     LIKDMTAMQVRANYVYYIGAGAVTTAGLISLARGLPTIWGALKSGLTDFRGTKNGDAV
                     ARTDRDLPMGLVTVGTLLCLAAMVLLPQIGINIVGGMLALFFAFLFVTVSARITGQIG
                     SSANPVSGMTVATLLLTSLMFLAAGWVGIEHRVLALSIGGVVCVAASTAGATSQDLKT
                     GFLVGATPRYQQIGLLIGVTASALLVGGIIQFLNDAKTTIVPKSYPGVQVSAIEPDAR
                     FALANGRLVPAEQASATPSFRVGRLYEQTGNALAGKYLVDDAGAIKYLVDPGVGGRER
                     VNYDGREIEKLDSPKAQIMALVVDGILTQKLPWGLILVGAFLAIAIELVGIPSLPVAV
                     GVYLPISTSATMFMGGVIRWLVDRRRSPAEREGPDADSGPGVLFSSGLIAGGAIMGVV
                     LAGLAARQWDQAFNLTKAVGALGESNVLSVVFYVVLLAVPLFLVARRVQRTIG"
     gene            complement(3116..>3570)
                     /locus_tag="VFN38_03900"
     CDS             complement(3116..>3570)
                     /locus_tag="VFN38_03900"
                     /inference="COORDINATES: protein motif:HMM:NF025616.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF4349 domain-containing protein"
                     /protein_id="HET9010928.1"
                     /translation="LGKVESVSASVQDAGEEYVDLGARAANARHMEARLVEMLARRTG
                     KLSEVLTVEQELRRVREEIERYDARLKWIERKTALSSLQVTLHEPVSVLDQRGPSPIT
                     EAFAEAWRRAVGVVAWCIASLGVLVPLGLLIGGLVVLVRRWPRFGGAT"
BASE COUNT          585 a         1271 c         1234 g          480 t
ORIGIN      
        1 gccgcacgta tacgagttga atcgcggcgc gaactgcggc gggatcgtcg ccggcccgga
       61 atacatctcg atcgcttcca cgtcctgcgg cgtgaactcg tcgggcgacc cgttctcgat
      121 gcgcatgccg tccacgacgt actgcggggg acagtcgcgc acgttggtgc cgtggttgaa
      181 ccggatggtc gggcgcccgt tccgggtgcc gatcgtcacg ctcggcaccc gccgcatcag
      241 gtccgtgaac tcgtgggcgt cgcgcttctc gatctcgtcg cgcgtgagaa agtagccgaa
      301 gccgcgcgac cgccgctccc agaatccggc cagcagccgg tgggaccgtg cctcgtactc
      361 gtcctccacc agcacgccgg ccagcgtcgt cgccagcgcg gtgagcgaga agaccaggga
      421 gtcggtgcgg cccgagcgga gccgcacctc ggcgctcgcc ggcgcgaatc ccatgcgccg
      481 gagggtcacg ctggccagcc ccgtgggcag gttgaccatc cggaagccac cggagtcgtt
      541 cgtgcggacc gacacgaagt ccgcgccccg gaagcgcact tcgacgcccg gaatggggat
      601 gccggccgag tcgcgcacga cgccgaccag actggcggga atctgggcga ggcacgcggc
      661 gagcggcgag gcgcacaggg ccgccaccgc cacgccgcgc gtcacgcgac gcacaaatcc
      721 ggtcatccga tgcctcccac tccgccgctc ggccgcgggc ggcggagagt tgtcgttacc
      781 cgatcgttcg ctgcacgcgg cgcgccacga ggaacagcgg caccgcgagc aggacgacgt
      841 agaacaccac ggacagcacg ttgctctcgc ccagcgcccc gaccgccttg gtcaggttga
      901 acgcctggtc ccactggcgc gccgccagcc ccgccagcac gacgcccatg atggcgcccc
      961 ccgcaatgag cccggacgag aagaggaccc cgggtcccga gtccgcgtca ggcccctccc
     1021 gctccgccgg gctgcgccga cggtccacca gccaccggat cacgccgccc atgaacatcg
     1081 tcgccgaggt cgagatcggg aggtagaccc ccaccgcgac cgggagcgac gggatgccca
     1141 cgagctcgat cgcgatcgcg aggaaggcgc cgacgaggat caggccccac ggcagcttct
     1201 gcgtcaggat gccgtccacc accagcgcca tgatctgcgc cttgggcgaa tccagcttct
     1261 cgatctcgcg accgtcgtag ttcacccgct cgcgcccgcc cacgccggga tcgacgagat
     1321 acttgatcgc gcccgcgtcg tcgacgagat acttgcccgc cagcgcattg ccagtctgct
     1381 cgtacagccg tcccacgcga aagctcggcg tggcggaggc ctgctcggcc gggaccagcc
     1441 gaccgttggc gagggcgaag cgtgcatcgg gctcgatcgc cgagacctgc acgccgggat
     1501 agctcttggg gacgatcgtc gtcttggcgt cgttcaggaa ctggatgatc ccgcccacga
     1561 ggagcgcgct cgcggtgacg ccgatgagca ggccgatctg ctggtagcgc ggcgtggcgc
     1621 cgaccaggaa gccggtcttg aggtcctgcg acgtcgctcc cgcggtggag gcggcgacgc
     1681 acaccacgcc gccgatggac agcgcgagca cgcggtgctc gatccccacc cagccggcgg
     1741 cgaggaacat cagcgacgtg aggagcagcg tcgccaccgt catccccgac acggggttgg
     1801 ccgacgagcc gatctgcccg gtgatgcgcg ccgacacggt gacgaacagg aacgcgaaga
     1861 agagggcgag catgccaccg acgatgttga tgccgatctg cgggagcagc accatggcgg
     1921 cgaggcagag cagggtgccc accgtgacga ggcccatcgg caggtcgcgg tcggtgcgcg
     1981 cgacggcgtc gccgttcttc gtgccgcgga aatcggtgag gccggacttg agggcgcccc
     2041 agatcgtggg cagtccgcgg gcgaggctga tcaggcccgc cgtggtgacc gcgccggcgc
     2101 cgatgtagta cacgtagttc gcgcgcacct gcatcgccgt catgtccttg atcaggatcg
     2161 tggcggggaa gatcggctcg gcgaggccgg cgccgaacag cttgatcgcc gggatgaggc
     2221 agaagaagga gagcacgccg cccgcgaaca ggaagccggc gatgcgggga ccgatgatgt
     2281 agccgacgcc cgtgagctcg ggactgatct ccgcctggat ctcgccgaag agctgggtct
     2341 ggccgttcgc gagcacgctg gtgaaggcgc gacgcggcac ttcgaggaag aggtgcaggc
     2401 cggcgttgag gaacttgtag gcggcgccga ggccgaagcc catgaacacc gtcttggcct
     2461 gcacgccgcg ctcctcgccc acgatgagga cctgcgcgca ggcggtgccc tcgggatact
     2521 tcaggttgcc gtgctccttc acgatcaggc tgcggcggat cggcacgagg aacagcacgc
     2581 cgaggatgcc gcccacgatg ccgatcgcca tgaccttggt ccacggcagc tcgtagccga
     2641 gcagcagcag cgccggcagc gtgaaggcga tccccgccgc gatcgactcg ccggccgagc
     2701 cggtggtctg cacgaggttg ttctggagga tcgtcgccgg ctggatgccg aaggcgcgcg
     2761 acacgtagcg gaagatcgtg atcgacagca ccgcgatcgg gatcgacgcg ctcacggtga
     2821 ggctcacctt gagcgcgagg tagatgctcg acgcggcgaa gacgagcccg agcagcacgc
     2881 cgaggacgat cgcgccgatg ctgaactctc tcggcgcctc cgtggcgggc acgtacgggg
     2941 agaaggtcgt ccccggcgtg gtgtgcgtgg atggagtggt catgggcgaa gtatggggcc
     3001 cgcgcgcgtc ggcacgccag acgcggcgcg gcccgtcgcc gcacgctgca cggccgtccg
     3061 ccgcacggct cgtcgccgca cccccgcacg gcggttctcc gcaacgctcg ttcgttcagg
     3121 tcgccccccc gaatctcggc caccgccgca cgagcacgac cagccccccg atcaacagcc
     3181 cgagcggcac gaggacgccg agcgacgcga tgcaccatgc cacgacaccc accgcgcggc
     3241 gccaggcctc ggcgaacgcc tccgtgatcg ggctcggtcc ccgctggtcg agcaccgaca
     3301 ccggctcgtg cagcgtgacc tggagggagc tcagtgccgt cttccgctcg atccacttga
     3361 ggcgcgcatc gtagcgctcg atctcctcgc gtacgcgtcg cagctcctgc tccaccgtca
     3421 acacctccga gagcttgccg gtgcgccgag cgagcatctc gaccagacgc gcctccatgt
     3481 gccgcgcgtt cgccgcgcgc gccccgaggt ccacgtactc ctccccggca tcctgcacgc
     3541 tggcggacac cgattccacc ttgcccagcg
//
LOCUS       DASSYW010000250         2230 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_834562, whole genome shotgun sequence.
ACCESSION   DASSYW010000250 DASSYW010000000
VERSION     DASSYW010000250.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2230)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2230)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2230
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_834562"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..768
                     /locus_tag="VFN38_03905"
     CDS             <1..768
                     /locus_tag="VFN38_03905"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HET9010929.1"
                     /translation="AARTAFKQFSEPLLNAFEHDVAHDLGSMASAAEKLNETIKNIVE
                     LNRTNMQRCNDTVSSIETLTSNLTELGQITRHIESFVSVITDVSRKTKLLALNAAIEA
                     ARAGQQGRGFAVVAEEVRKLADDSKQAAQQVSESVQEIQRAIERVDTVVGSADAGLSG
                     VREVTVDAQRVLAGVVAGLGRTVAFVEQVAESVGVESSALDGLLSDMGEIHGHAASAL
                     TEATQSAEDGAARDAALAAASRMAARMRTLAAGSAAS"
     gene            complement(789..>2230)
                     /locus_tag="VFN38_03910"
     CDS             complement(789..>2230)
                     /locus_tag="VFN38_03910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HET9010930.1"
                     /translation="EKNLDWWASDEDSPYTEVKRFDWYRGYHVGGRSLMWGRCSFRWS
                     DYDFEANAKDGIATDWPIRYAEIAPWYSHAERFAGIAGSREGLPQLPDGEFQPAMALN
                     CAESLFKERLEKLYDGRRRLISSRTANLTQALTGRSACQYRDACWLGCPYGAYFSTQS
                     STLPAAMKTGRLTMKVFAIANEVLFDKDTKRATGVRVLDAITNQTTDYSAKIIFLCAS
                     TLNSTWLLLRSATDVWPGGLGSSSGELGHNLMDHHFRVGAEGRMEGLDDKNVFGRRPN
                     PSYVPRYRNLFGDKRPYLRGFGYEGGAGRESWSRAVAELGIGGEFKDSIAEPGQWSIG
                     GTAFGEMLPNHENKVTLDETKKDKWGLPVLKIDCATGENERLMRQDMMADMAEMLTAA
                     GVKSVRTFDEGYFPGMGIHEMGTARLGRDPKSSVLNAHNQVWDAPNVFVTDGSCMAST
                     ACQNPSLTYMALTARAADFAVRELNRRNL"
BASE COUNT          362 a          749 c          756 g          363 t
ORIGIN      
        1 gccgcacgca cagcgttcaa acagttttcc gaaccgttgc tcaacgcgtt cgaacatgac
       61 gtcgctcacg acctgggatc gatggcaagc gctgcggaga aactcaacga aaccatcaag
      121 aatatcgttg agctcaacag aacgaacatg cagcgctgca acgacaccgt atcgagcatc
      181 gagacgctca ccagcaacct gaccgaactc ggccagatca cccgtcacat cgagagcttc
      241 gtcagcgtca tcaccgacgt ctcccgaaag accaaactgc tcgcgctgaa tgcggcaatc
      301 gaggcggcgc gcgcagggca gcaggggcgc ggattcgccg tggtcgcgga ggaggtgcgc
      361 aagctggcgg acgactccaa gcaggcggcg cagcaggtga gcgagtcggt gcaggagatc
      421 cagcgcgcca tcgagcgcgt ggacaccgtc gtgggatcgg cggacgccgg cctgtccggc
      481 gtgcgcgagg tgaccgtgga tgcccagcgc gtgctcgccg gcgtggtggc gggactcggc
      541 cgcacggtgg cgttcgtgga gcaggtggcg gagagtgtcg gcgtcgagtc gtcggcgctg
      601 gatggcctcc tctccgacat gggcgagatc cacggccacg ccgcctcggc gctcaccgag
      661 gcgacgcaga gcgccgagga tggcgcggcg cgggacgcgg cgctcgctgc ggcgagccgg
      721 atggcggcgc ggatgcggac gctggccgcc gggtccgccg ccagctagcg gccgaccgcg
      781 tcagcgaatc acaggttgcg gcggttcagc tcccgcaccg cgaagtcggc ggcccgcgcc
      841 gtgagcgcca tgtacgtgag cgacggattc tggcacgccg tggacgccat gcacgaccca
      901 tcggtgacga acacgttcgg cgcgtcccac acctggttgt gcgcgttgag cacggacgac
      961 ttcggatcgc gccccaagcg cgccgtcccc atctcgtgga tgcccatgcc ggggaagtag
     1021 ccctcgtcga aggtgcgcac gctcttcacg ccggccgcgg tgagcatctc cgccatgtcg
     1081 gccatcatgt cctggcgcat caggcgctcg ttctcgccgg tagcgcaatc gatcttgagc
     1141 acgggcagcc cccacttgtc cttcttcgtt tcgtcgaggg tcaccttgtt ctcatggttc
     1201 ggcagcatct cgccgaacgc cgtgccgccg atggaccact ggcccggctc ggcgatcgag
     1261 tccttgaact cgccgccgat cccgagctcc gccaccgcac gcgaccagct ctcgcgcccc
     1321 gcgcctcctt cgtagccgaa gccgcgcagg tacggccgct tgtcgccgaa caggttccga
     1381 tatcgcggca cgtacgacgg attcggccgg cgtccgaaga cgttcttgtc gtcgaggcct
     1441 tccatgcgcc cttcggcgcc gacgcggaag tggtgatcca tcaggttgtg gcccagctcg
     1501 cccgagctgc tgcccagccc accgggccac acgtcggtgg ccgagcggag gagcagccag
     1561 gtggagttga gcgtggacgc acagaggaaa atgatcttcg ccgagtagtc ggtggtctgg
     1621 ttggtgatcg cgtcgagcac gcgcacaccg gtggcgcgct tcgtgtcctt gtcgaagagc
     1681 acttcgttcg cgatcgcgaa taccttcatc gtgagccggc cggtcttcat cgcggcgggc
     1741 agcgtggagg actgcgtgct gaagtacgcg ccgtacgggc agccgagcca gcaggcgtcg
     1801 cggtactggc aggcgctgcg tcccgtgagc gcctgcgtga ggttcgcggt gcggctcgag
     1861 atcaggcgcc ggcgtccgtc gtagagcttc tccaatcgct ccttgaacag cgactcggcg
     1921 cagttcaacg ccatggcggg ctggaactcg ccgtcgggca gctgcggcaa gccctcgcgc
     1981 gagccggcga tcccggcgaa gcgctcggcg tggctgtacc acggggcgat ctcggcgtag
     2041 cggatgggcc agtcggtcgc gatcccgtcc ttcgcgttcg cctcgaagtc gtagtcgctc
     2101 cagcggaagc tgcagcgtcc ccacatcagc gatcgtccgc cgacgtgata gccgcggtac
     2161 caatcgaagc gcttcacctc ggtgtacggc gagtcctcgt ccgacgccca ccagtcgaga
     2221 ttcttctcgt
//
LOCUS       DASSYW010000251         3442 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1163105, whole genome shotgun sequence.
ACCESSION   DASSYW010000251 DASSYW010000000
VERSION     DASSYW010000251.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3442)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3442)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3442
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1163105"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            128..703
                     /locus_tag="VFN38_03915"
     CDS             128..703
                     /locus_tag="VFN38_03915"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HET9010931.1"
                     /translation="MSPTPRAGAIARARIVEASVRCLVRDGVAGATMAAIAAEGGVSK
                     ALLHYHYADRARLLSEVATQLGRRLVERERAVMDAAHGSGAVDALWEWLDGELARGEL
                     RALLELAMQREPEVRAATEAAALARSRAAAHTVDRLFTGLGLTPRMPAALLAEASVAF
                     VDGLAIGTATPTRDPRVSFDLFWLALLSLAE"
     gene            777..1307
                     /locus_tag="VFN38_03920"
     CDS             777..1307
                     /locus_tag="VFN38_03920"
                     /inference="COORDINATES: protein motif:HMM:NF014724.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HET9010932.1"
                     /translation="MRLVLIVLGLLLLGWVTSLGAVLAWERNDQARPVSAIVVLGAAQ
                     YVGRPSPVLRARLDHAIALFHRKLAPLMIVTGGTGTGDTTSEAAVSQRYAIRRGVPAS
                     AILMENEGRTTSESMEGVAALLGSRSRRDVLLVSDPFHMLRLTILARRHGLEPYASPT
                     PTSPIAASPTERWKYA"
     gene            1394..2731
                     /locus_tag="VFN38_03925"
     CDS             1394..2731
                     /locus_tag="VFN38_03925"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HET9010933.1"
                     /translation="MTALAGLAGPAQGQGVPKLQYEKLTLSNGLELILHEDHSTPIVV
                     VNTWYKVGSGDEKPGRTGFAHLFEHIMFMGSENVPVGQFDKWLEAAGANNNGSTTEDR
                     TNYYESMPSNALPLALWLDADRMGRLLPVMDQTKLDLQRDVVKNERRQRVDNVPYGKW
                     RETVLATLYPANHPYHWPVIGSMADLSAASLEDVKQFFRTYYAPNNATMVIAGDFNRD
                     SAVTWVNRYFGAIPRGPQMPARPVVPVVTVPRDTFLVLEDRVTLPRLHETWKGERIYH
                     ENDAPLDILASVLAGDKNSRLYKRLVFDMQVAQDVSAFNNSTKLDGDFNILVTPKPGQ
                     TPTRMAELVREEIDKVVKDGVTPRELARALNARRTSFLDQIASVLGKSDRLAEYNYFA
                     GTPDWIQRDAERYDRVTAADVQRVAAQYLTRPKVVLTVVPQGKKDLMVTGGTN"
     gene            2731..>3442
                     /locus_tag="VFN38_03930"
     CDS             2731..>3442
                     /locus_tag="VFN38_03930"
                     /inference="COORDINATES: protein motif:HMM:NF012879.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HET9010934.1"
                     /translation="MRAPLRSLTALTAVASLAACSGAPVVTTATPQPPSPVVAAPIDL
                     TRPPVLGAPPALRVPPITTRQLPNGMRIVVVEQHELPIADVLLQIRSGGEADPAGHTG
                     TAALTSALLTEGTTTRSALEIADQAAFLGVRVGAASGWEQSTVSLHTPTAQLDSAMAL
                     FADIALRPTFPAPDLERVRKVRLTSLQQLRDRGPAIADRAYASALYGEQHPYGRPLAG
                     TEASIAAISRADLQAFYDT"
BASE COUNT          529 a         1219 c         1201 g          493 t
ORIGIN      
        1 cggtgcacct cgttcacggc gagcccgacg cccaagacgc cttcgccgag cagttgcgcg
       61 gcgccggcta tcccacggtg agcgcgccga tgccacgttc caccatcacg cagtgacgac
      121 gccagcgatg tcgcccacac cgcgcgcggg agcgatcgcc cgggcgcgca tcgtcgaggc
      181 ctccgtgcgg tgcctcgtgc gcgatggggt ggcgggagcg accatggcgg ccatcgccgc
      241 cgaggggggc gtgagcaagg cgctgctgca ctaccactac gcggatcggg cgcggctgct
      301 gtcggaagtg gcgacgcagc tcggccgacg cctcgtggaa cgggaacgtg cggtgatgga
      361 tgcggcgcat ggcagcggcg ccgtggacgc gctctgggag tggctggacg gagagctggc
      421 gcgcggggag ctgcgcgcgt tgctcgagct cgccatgcag cgcgagcccg aagtgcgggc
      481 cgccacggag gcggcggcgc tcgcccggtc gcgggcggcg gcgcacacgg tggatcggct
      541 cttcacgggg ctggggctca cgccgcgcat gccggcggcg ctgctcgccg aggcgagcgt
      601 ggccttcgtg gacggcctgg ccatcggcac ggccacgccg acgcgtgacc cgcgcgtgag
      661 cttcgatctc ttctggctgg cccttctgag cctcgcggag tgagggacgc aagccttccg
      721 tcccctattg aacggaggct agcttcccag cgatgccttc atcccgccca cctttcgtgc
      781 gtctggtgct catcgtgctc gggctcctgc tgctcgggtg ggtgacctcg cttggcgcgg
      841 tgctcgcctg ggagcgcaac gaccaggcgc gtcccgtctc ggccatcgtg gtcctcggcg
      901 ccgcccagta cgtcgggcgc ccctcgccgg tgctgcgcgc acggctggat catgccatcg
      961 ccctgtttca ccggaagctc gcgccactga tgatcgtgac ggggggcacg gggacggggg
     1021 acaccacgag cgaggccgcc gtgagccagc gctacgcgat ccggcggggc gttccggcgt
     1081 cggcgatcct gatggagaac gagggccgca cgaccagcga gtcgatggag ggggtcgccg
     1141 cgctcctcgg cagccgctcg cggcgcgacg tgctgctcgt gagcgacccc tttcacatgc
     1201 tccggctcac catcctggcg cgacgccatg gactggagcc atacgcgtca ccaaccccga
     1261 ccagcccgat cgcggccagc ccgaccgagc ggtggaagta cgcctagagc gagtcgatca
     1321 aagcccctct ggccttcatc ttcgagagga acagccggtg aacagacgac atctgacgac
     1381 gagttgcgca ttgatgaccg ccctggcggg gctcgcgggt cccgcccagg gacagggcgt
     1441 gccgaagctc cagtacgaga agctcaccct gtccaacggc ctcgagctca tcctgcacga
     1501 ggatcactcc acgccgatcg tcgtcgtcaa cacctggtac aaggtggggt cgggcgacga
     1561 gaagccgggc cgtaccgggt tcgcgcacct gttcgagcac atcatgttca tgggctcgga
     1621 gaacgttccg gtggggcagt tcgacaagtg gctcgaggcc gccggtgcca acaacaacgg
     1681 ctcgacgacg gaagaccgga cgaactacta cgagtcgatg ccgtcgaacg cgctgccgct
     1741 ggcgctctgg ctggacgcgg accgcatggg ccgcctgctg ccggtgatgg accagaccaa
     1801 gctcgacctt cagcgcgacg tcgtgaagaa cgagcgccgg cagcgggtgg acaacgtccc
     1861 gtacggcaag tggcgggaga ccgtgctggc cacgctctat ccggccaacc atccctacca
     1921 ctggccggtg atcggctcga tggccgattt gagcgccgcg tcgctcgagg acgtgaagca
     1981 gttcttccgc acctactacg cgccgaacaa cgcgacgatg gtgatcgcgg gcgacttcaa
     2041 ccgcgattcc gcggtcacct gggtgaaccg gtacttcggc gccatcccgc gcgggccgca
     2101 gatgccggca cgcccggtgg tgcccgtggt gacggtgccg cgcgacacct tcctcgtgct
     2161 ggaggaccgg gtgacgctgc cgcggctgca cgagacgtgg aagggggagc ggatctacca
     2221 cgagaacgat gcgccgctgg acatcctggc cagcgtgctg gcgggggaca agaattcgcg
     2281 cctgtacaag cggctcgtgt tcgacatgca ggtcgcgcag gacgtctccg cgttcaacaa
     2341 cagcacgaag ctcgacggtg acttcaacat cctcgtgacg ccgaagccgg gccagacccc
     2401 gacccgcatg gcggagctcg tgcgggagga gatcgacaag gtggtgaagg acggggtcac
     2461 gccgcgcgag ctggcgcggg cgctcaacgc gcgccggacg tcgttcctcg accagatcgc
     2521 ctcagtgctc ggcaagtcgg accggctggc cgaatacaac tacttcgccg gcacgcccga
     2581 ctggatccag cgggacgccg agcgctacga tcgcgtgacc gccgccgacg tgcagcgcgt
     2641 cgccgcccag tatctcacca ggccaaaggt ggtgctcacc gtggttcccc agggaaagaa
     2701 ggacctgatg gtgaccggag ggaccaactg atgcgcgccc ctctccgctc gctgacggcg
     2761 ctcaccgcgg tcgcgtcgct cgccgcctgt tccggcgcgc cggtggtcac gaccgccacg
     2821 ccgcagccgc cgtcgcccgt ggtggccgct ccgatcgatc tcacccggcc gccggtgctg
     2881 ggcgcacccc ctgcgctccg cgttccgccc atcacgaccc gccagcttcc gaacgggatg
     2941 aggatcgtcg tcgtcgagca gcacgagctg ccgatcgccg acgtgctgct ccagatccgc
     3001 agcggcggcg aggccgatcc ggcgggacac acgggcaccg cggcgctcac ctccgcgctg
     3061 ctcaccgagg gcacgacgac gcggtccgcg ctggagatcg ccgaccaggc ggccttcctc
     3121 ggcgtgcgcg tcggcgcggc cagcggctgg gagcagtcca ccgtgtcact gcacacgccc
     3181 accgcgcagc tggacagcgc gatggcgctg ttcgccgaca tcgccctccg gcccaccttc
     3241 ccggcgccgg acctcgagcg cgtgcggaag gtgcgcctca cgtcgctcca gcagctgcgc
     3301 gaccgcggac cggcgatcgc ggaccgcgcc tatgcgtcgg cgctgtacgg agagcagcat
     3361 ccctacggcc ggccgctcgc gggcaccgaa gcatccatcg ccgcgatctc gcgcgccgac
     3421 ctgcaggcct tctacgacac gt
//
LOCUS       DASSYW010000252         5625 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_686075, whole genome shotgun sequence.
ACCESSION   DASSYW010000252 DASSYW010000000
VERSION     DASSYW010000252.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 5625)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5625)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5625
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_686075"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..709)
                     /locus_tag="VFN38_03935"
     CDS             complement(<1..709)
                     /locus_tag="VFN38_03935"
                     /inference="COORDINATES: protein motif:HMM:NF012876.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HET9010935.1"
                     /translation="MTLRSRLALGLVIIAAVLVVPLVVARTSMQRLHGQVRSLREGEF
                     QASLVLGRLRDALGDVRAREVALGVVKSDTVHAQLREALERAELLADALDAFQLDSAT
                     RRIHRDLATVRPATEEEFAAMRAGRGDRADSISRQTVGPALRDADLALSPVEQLLRAR
                     TTERVLAAESALGRAEQISLAALVVALILAAAIALWLTRSISRPVTALEEGMRAVADG
                     ELDHALAVGTDRHDEFGR"
     gene            922..2226
                     /gene="asnS"
                     /locus_tag="VFN38_03940"
     CDS             922..2226
                     /gene="asnS"
                     /locus_tag="VFN38_03940"
                     /EC_number="6.1.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004816 - asparagine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006421 - asparaginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine--tRNA ligase"
                     /protein_id="HET9010936.1"
                     /translation="MSTAPFVRLAELPAHVGGPVTVRAWVTHVRSSGKVAFAALRDGT
                     GVAQAVFVRSQVGDEIWQRFAELTTETSVEISGEPRENPRAPGVLDIGVTALRIVGTS
                     PSDYPIQPKEHGIDFLLDNRHFWLRSPRQRAIMVIRSEVEQAIHDFFYERGFLRVDTP
                     ILTAAIGERSGLFATEYFEEGNAYLAQTGQLYGEAAAAAFGKIYTFGPTFRAEKSKTR
                     RHLTEFWMIEPEVAWNDSEANMKLQEDFVEYLVQRVVQRRRVELAELERDVTKLERIR
                     APFPRLNYTDAVALVQKKGSDTKWGDDLGAEDEALIVEDYDKPVFVFNYPKEAKAFYM
                     KENPDDPRTVLCDDLLAPEGFGEMIGGSQREDDYDKLVARIKEEGLPMEAYDWYLDLR
                     RYGTFTHAGFGLGLERTVAWICGIQHIREVIAFPRMMHRLRP"
     gene            complement(2283..3047)
                     /gene="mazG"
                     /locus_tag="VFN38_03945"
     CDS             complement(2283..3047)
                     /gene="mazG"
                     /locus_tag="VFN38_03945"
                     /EC_number="3.6.1.9"
                     /inference="COORDINATES: protein motif:HMM:NF007113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphohydrolase"
                     /protein_id="HET9010937.1"
                     /translation="MQEKAGLPDALALMKDLRARCEWDAAQTHESLRPYLIEEAYEVD
                     DAIRAGDDALLREELGDLLLQVLFHSVVAEERGAFDFGDVAEGFLRKMKSRHPHLYEG
                     GARQSWEGMKAKKRESIVDGLPADLPALHRAFRLQDRAAGVGFDWPDAAGPAEKVEEE
                     LAEVRAEVAAGARAAGYGVPDPKLEEELGDLLFSVVNLCRKLGVHPSLALDKANTKFS
                     RRFQGVEALARDRGIAVHSAGLEVLDGLWDEVKGEG"
     gene            3107..4189
                     /gene="alr"
                     /locus_tag="VFN38_03950"
     CDS             3107..4189
                     /gene="alr"
                     /locus_tag="VFN38_03950"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008784 - alanine racemase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HET9010938.1"
                     /translation="MTRAWVEIDLGALCRNGAAVAARAGVPLMPMVKADGYGLGALRA
                     ALALDALEPWGYGVATVTEGDELRRGGITRPIIVFTPILRNEIDALRRGDLTPALGEP
                     AVIESWARTGRPWHLQVDTGMSRAGMRWDLVGQHRELLERARPDGVFTHFHSAQLDDP
                     SRDQQEHRFQRALAALPDRPSLVHVENGPAVERRAPSPWSLCRPGIFLYGVAGVESGA
                     IVPEPVVSVRARIVELRTVDDGETVSYDATWRAKGPRRIATVPVGYADGYRRSLSNRG
                     VALLGGRRISVAGRVTMDMTMFDVTDTDAALGDLVTLLGRDGDDIVTVSEMAAAAELS
                     PYEILTGLKLRLPRRYRSATPDGGIP"
     gene            4186..5358
                     /locus_tag="VFN38_03955"
     CDS             4186..5358
                     /locus_tag="VFN38_03955"
                     /EC_number="5.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008973 - phosphopentomutase activity
                     [Evidence IEA];
                     GO_process: GO:0009117 - nucleotide metabolic process
                     [Evidence IEA];
                     GO_process: GO:0043094 - cellular metabolic compound
                     salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopentomutase"
                     /protein_id="HET9010939.1"
                     /translation="MRRRAVILVLDGVGVGAAPDAASYGDVGSDTLGNLARVRGGLAL
                     PNLAAAGLGNVAPLDGLEPASEPDGAWGLMHPASAGKDSTTGHWEIAGLHLARPFPTY
                     PRGFPREVLDPFSAATGRAVLGNVAASGTEIIERFGAEHQRTGAWIVYTSADSVFQVA
                     AHEEVVPLDELYAACETARRQLVAPHDVSRVIARPFVGAPGAYRRTANRRDYSLAPPG
                     DTLIDALAAAGVPRAGVGKVDDLFAGRHLRARHTADNAEGIQAILEWLHGSQGGLLFA
                     NLVDFDTLYGHRNDAEGFERALREFDDALPAIRDALREDDLLFITADHGNDPTTASSD
                     HARENVPLLVLGDAVHPVPLGERETFADLGATVAEWLNVGFRGRGISFLPQLERGR"
     gene            5421..>5625
                     /locus_tag="VFN38_03960"
     CDS             5421..>5625
                     /locus_tag="VFN38_03960"
                     /EC_number="3.5.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008600100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004126 - cytidine deaminase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0009972 - cytidine deamination [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytidine deaminase"
                     /protein_id="HET9010940.1"
                     /translation="MAAMDRAYAPYSGFRVGAALLASDGSVTEGCNVENASYPAGICA
                     ERGAIAAAIARGVRDFTAIVIATE"
BASE COUNT          793 a         2039 c         1987 g          806 t
ORIGIN      
        1 gccgcccgaa ctcgtcgtgg cgatccgtcc cgacggcgag cgcatggtcg agctcgccat
       61 cggccacggc ccgcatcccc tcttcgagcg cggtgactgg ccggctgatc gatcgcgtga
      121 gccacaaggc gatggcggcg gccaggatca gcgccaccac gagtgcggcc agggagatct
      181 gctcggcccg accgagcgcc gactcggccg cgagcacgcg ctcggtggtc cgggcgcgca
      241 gcagctgctc caccggcgag agggccaggt cggcgtcgcg caacgccggc cccacggtct
      301 ggcgcgagat cgagtcggcg cggtcgccgc ggccggcgcg catggccgcg aactcctcct
      361 ccgtggcggg gcgcacggtg gcgaggtcgc ggtgaatgcg cctcgtcgcg ctgtccagct
      421 ggaacgcgtc cagcgcgtcg gcgagcagct cggcgcgctc cagcgcttcg cgcagctggg
      481 cgtgcacggt gtcgctcttc accacgccca gcgcgacctc gcgtgcgcgg acgtcgccca
      541 gcgcgtcgcg caggcggccg agcaccagcg atgcctggaa ctcgccctcg cgcaggctcc
      601 gcacctggcc gtgcagtcgc tgcatggacg tgcgggccac gaccagtggc acgacgagaa
      661 cggcggcgat gatgacgagg ccgagggcga gcctcgagcg cagggtcatg tcgagtgtga
      721 tctggtgcgg gtgcggatgc gagcgcgagc gcgcaaatgc aaggaaccgg ccgcgaccgc
      781 cctttgctgc acccgggagg gcgtgtacca ttgttggctc ggcccacagt gcgctgccat
      841 gcgtcttcgc gtcgtgcggc gctcctgttc gggagtctag acgtggcgcg ggctccgcgc
      901 cactcgtccg ccatccgcga catgtccacc gcacccttcg tccgcctcgc cgagctgccc
      961 gcgcacgtcg gcggccccgt caccgtccgc gcctgggtca cccacgtccg ctcctccggg
     1021 aaggtcgcct tcgccgccct gcgcgacggc accggcgtcg cccaggcggt gttcgtgcgg
     1081 agccaggtcg gcgacgagat ctggcagcgc ttcgccgagc tgacgacgga gacgtcggtg
     1141 gagatctcgg gcgagccgcg cgagaatccg cgcgcccccg gcgtgctcga catcggtgtc
     1201 accgcgctcc ggatcgtcgg caccagcccg agcgactacc cgatccagcc gaaggagcac
     1261 ggcatcgact tcctgctgga caaccgccac ttctggctcc ggtctccgcg gcagcgcgcg
     1321 atcatggtga tccggagcga ggtggagcag gcgatccacg atttcttcta cgagcgcggc
     1381 ttcctgcgcg tggacacgcc catcctcacg gccgccatcg gggagcgctc ggggttgttc
     1441 gccaccgagt acttcgagga agggaacgcc tacctggcgc agaccgggca gctttacggc
     1501 gaggcggccg ccgcggcgtt cgggaagatc tacaccttcg gccccacctt ccgcgccgag
     1561 aagtccaaga cgcgccgcca cctcacggag ttctggatga tcgagcccga ggtggcgtgg
     1621 aacgactccg aggcgaacat gaagctgcag gaggacttcg tcgagtatct cgtgcagcgc
     1681 gtggtccagc gccggcgcgt cgagctggcg gagctcgagc gcgacgtgac gaagctcgag
     1741 cggatccggg cccccttccc gcggctgaac tacaccgacg ccgtggcgct cgtgcagaag
     1801 aaggggagcg acaccaagtg gggcgacgat ctcggggcgg aggacgaggc gctgatcgtg
     1861 gaggactacg acaagccggt gttcgtcttc aactatccca aggaagcgaa ggcgttctac
     1921 atgaaggaga accccgacga cccgcgcacg gtcctgtgcg acgacctgct cgcgccggaa
     1981 gggttcgggg agatgatcgg cgggtcgcag cgtgaggacg actacgacaa gctcgtcgcg
     2041 cgcatcaagg aggaagggct gccgatggag gcgtacgact ggtatctcga cctgcgccgc
     2101 tacggcacct tcacccacgc cggcttcggc ctcggcctgg agcgcacggt cgcgtggatc
     2161 tgcggcatcc agcacatccg cgaggtgatc gccttccccc ggatgatgca ccggctcagg
     2221 ccatagaaga cagtgaacgg tgaacggtga acggtcatcg gttcaccgtt caccgcccac
     2281 cttcacccct cccccttcac ctcgtcccac agcccgtcga gcacttccag cccggcggaa
     2341 tgcacggcaa tcccgcggtc cctggccagc gcttccacgc cctggaatcg ccgcgagaac
     2401 ttcgtgttcg ccttgtcgag cgcgagcgag gggtggacgc cgagcttccg gcacaggttg
     2461 acgacggaga agagcaggtc cccgagctcc tcctccagct tcgggtcggg cacgccgtag
     2521 cccgccgcgc gggcgccggc cgccacctcc gcccgtacct ccgccagctc ctcctccacc
     2581 ttctcggcgg ggcccgcggc gtcgggccag tcgaagccca cgccggcggc gcggtcctgg
     2641 agccggaagg cccggtgcag ggcgggcagg tcggccggca gcccgtccac gatgctctcc
     2701 cgcttcttcg ccttcatccc ctcccagctc tggcgcgccc ccccttcgta gaggtgcggg
     2761 tggcgcgact tcatcttccg gaggaaacct tctgccacgt cgccgaagtc aaaggcacca
     2821 cgctcctcgg cgaccacgct gtggaagagc acctggagca gcaggtcgcc cagctcctcg
     2881 cggagcaggg cgtcgtcgcc ggcgcggatc gcgtcgtcca cctcgtacgc ttcctcgatg
     2941 agatatggac gcagcgactc gtgcgtctgc gccgcatccc actcgcagcg cgcgcgcagg
     3001 tccttcatca acgccagggc gtcgggcagc cccgcctttt cttgcatcgg tctcctccgg
     3061 tccgtatctt cttcagtctt cacatgatag cgaatcgcgc cgtcccatga cacgcgcctg
     3121 ggtcgagatc gacttgggcg cgttgtgccg caacggggct gccgtggcgg cacgtgcggg
     3181 cgtgcccctc atgcccatgg tgaaggccga cggctacggc ctgggcgcgc tgcgcgccgc
     3241 gctggcgctc gacgcgctgg agccgtgggg ctacggcgtc gccacggtca ccgaaggcga
     3301 cgagctgcgt cgcggtggca tcacccgccc catcatcgtc ttcaccccca tcctgcgcaa
     3361 cgagatcgac gcgctgcgcc gcggcgacct cacccccgct ctcggcgagc ccgcggtgat
     3421 cgagtcatgg gcgcgcacgg ggcgcccgtg gcatctccag gtggacacgg ggatgtcccg
     3481 cgccggcatg cggtgggacc tcgtcggcca gcatcgcgag ctgctggagc gtgcccgccc
     3541 ggacggcgtg ttcacccatt tccattccgc ccagctggac gacccgagcc gcgaccagca
     3601 ggagcaccgc ttccagcggg cgctggccgc actgcccgac cggccctcgc tcgtccacgt
     3661 cgagaacgga cccgcagtcg agcgacgtgc gccgtcgccg tggagcctgt gccggccggg
     3721 catctttctc tacggcgtcg cgggcgtcga gtcgggcgcg atcgtccccg agccggtggt
     3781 gagcgtccgc gcccgcatcg tggagctgcg cacggtcgac gacggcgaga cggtgagcta
     3841 cgacgcgacg tggcgcgcga agggcccgcg ccggatcgcc accgtgcccg tggggtacgc
     3901 cgacggctac cggcgcagcc tgagcaaccg tggtgtcgcg ctgctcggcg gacgccgcat
     3961 ctccgtcgcg ggacgggtga cgatggacat gacgatgttc gacgtgacgg acaccgacgc
     4021 ggcgctcggc gacctcgtga cgctgctcgg ccgcgacgga gacgacatcg tgacggtgag
     4081 cgagatggcc gccgccgccg agctgtcgcc ctacgagatc ctcacgggcc tcaagctccg
     4141 gctgccgcgg cgctaccggt ccgcgacgcc cgacgggggg atcccgtgag gcgccgcgcc
     4201 gtgatcctcg tgctcgacgg cgtgggcgtc ggcgccgccc ccgacgccgc gtcctacggc
     4261 gacgtgggga gcgacaccct cgggaacctc gcgcgcgtgc ggggtggcct cgcgctcccc
     4321 aacctcgcgg cggcggggct tggcaacgtc gccccgctgg acggtttgga gcccgcgtcc
     4381 gagccggacg gggcgtgggg cctcatgcat cccgcgtcgg cggggaagga cagcaccacg
     4441 ggacactggg agatcgccgg gctgcacctc gcccgcccct tccccacgta tccgcgcggc
     4501 ttcccccgcg aggtgctcga ccccttctcg gccgccacgg ggcgcgccgt gctcgggaac
     4561 gtcgccgcca gcggcaccga gatcatcgag cggttcggcg cggagcacca gcgcaccggg
     4621 gcgtggatcg tgtacacgtc agcggactcg gtcttccagg tggcggccca cgaggaggtc
     4681 gtgcccctgg acgagctcta cgcggcgtgc gagaccgccc gccggcagct cgtcgcgccg
     4741 cacgacgtgt cgcgcgtcat cgcccgtccc ttcgtgggcg cgcccggcgc ctaccggcgc
     4801 accgccaacc ggcgcgacta ctccctcgcg ccgccgggcg acacgctgat cgacgcgctg
     4861 gccgcggccg gcgtcccgcg cgccggggtg gggaaggtgg atgacctgtt cgccggccgg
     4921 cacctccggg cgcgccatac ggcggacaat gccgagggca tccaggccat cctcgagtgg
     4981 cttcatggaa gccagggtgg gttgctgttc gccaaccttg tagattttga cacgctgtat
     5041 ggccaccgca acgacgcgga ggggttcgag cgcgccctgc gcgagttcga cgacgccctg
     5101 ccggccatcc gcgacgcact ccgcgaggac gatctgctct tcatcaccgc cgaccacgga
     5161 aacgacccca cgacggcctc cagcgaccat gcgcgcgaga acgtgccgct gctggtgctg
     5221 ggcgacgccg tgcacccggt gccgctcggc gagcgcgaga ccttcgccga tctgggggcg
     5281 acggtggcgg agtggctgaa cgtggggttc cgcgggcgtg ggatctcgtt cctgccgcag
     5341 ctggagcggg gccggtgacg gcgcgggacg agcagctcgc gcccggctcg cgccagctca
     5401 cggtgctcgc cgagcgggcg atggcggcga tggaccgggc gtacgccccg tattccgggt
     5461 tccgggtggg agcggccctc ctggccagcg acggcagcgt caccgagggg tgcaacgtgg
     5521 agaacgcgtc gtatccagcg gggatctgcg ccgaacgggg ggcgatcgcg gcggcgatcg
     5581 cccgcggggt gcgcgatttc acggccatcg tgatcgccac cgaag
//
LOCUS       DASSYW010000253         3783 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1310733, whole genome shotgun sequence.
ACCESSION   DASSYW010000253 DASSYW010000000
VERSION     DASSYW010000253.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3783)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3783)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3783
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1310733"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..788)
                     /locus_tag="VFN38_03965"
     CDS             complement(<1..788)
                     /locus_tag="VFN38_03965"
                     /inference="COORDINATES: protein motif:HMM:NF012337.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl synthase N-terminal-like
                     domain-containing protein"
                     /protein_id="HET9010941.1"
                     /translation="MERRVVITGIGLVSALGIGTEATWNALLAGTSGVGRVTKFDVSN
                     FAAQIAAEVRGFDPLQFVDKKDVKKMDVFIQYAIAAAQFAMDDSGLSITPANATNVGV
                     FIGSGIGGFSTIEREHETLLQSGPRRISPFFIPAMIINLASGQVSIRFGAKGPNLATC
                     TACSASAHAVGESYEIIKRGDADAMIAGGSEAAITPMSIGGFAALRALSTRNDEPHRA
                     SRPFDKDRDGFVIGEGAGVVIMEELESARRRGARIYAEVAGYGSS"
     gene            complement(810..1052)
                     /gene="acpP"
                     /locus_tag="VFN38_03970"
     CDS             complement(810..1052)
                     /gene="acpP"
                     /locus_tag="VFN38_03970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019948606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HET9010942.1"
                     /translation="MAVADKVKSIIVEQLGVDEEEVTPDASFVDDLGADSLDTVELVM
                     AFEEEFGIEIPDESAEKITRVKEAIDYIEAHAKSKK"
     gene            complement(1148..1888)
                     /gene="fabG"
                     /locus_tag="VFN38_03975"
     CDS             complement(1148..1888)
                     /gene="fabG"
                     /locus_tag="VFN38_03975"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004316 - 3-oxoacyl-[acyl-carrier-protein]
                     reductase (NADPH) activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-[acyl-carrier-protein] reductase"
                     /protein_id="HET9010943.1"
                     /translation="MFELTGKVALVTGASRGIGRAIALALAGRGAHVVAAARGSNADA
                     TVEAIRAAGGSATAVSADVTDSASVEAMIAAALAVNGRLDVLVNNAGVARDQLMLRMK
                     RADWDEVLATNLTAAFTIVQAALKPMIRQRGGRIISIGSVVGQMGNAGQANYAASKAG
                     LVGFSKAIAREVASRQITVNVVAPGLIATDMTQALTDKVQGDWSAQIPLGRIGTPEDV
                     AAAVCFLASDEASYITGQVLAVNGGMYT"
     gene            complement(1876..2838)
                     /gene="fabD"
                     /locus_tag="VFN38_03980"
     CDS             complement(1876..2838)
                     /gene="fabD"
                     /locus_tag="VFN38_03980"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: protein motif:HMM:TIGR00128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004314 - [acyl-carrier-protein]
                     S-malonyltransferase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HET9010944.1"
                     /translation="MSGKIAFVFPGQGSQAVGMGLALAAAYPEAERALAEAEAAFAGA
                     ANGSTGPSLRAMLAAGPEDALTLTEHAQPAILAVSVAAARVLQARGLEPAFVAGHSLG
                     EYSAHVTAGTFSLADGVAVVRRRGRYMQESVPVGTGAMAAVIGLDEPLVEQACREAAE
                     GQVVSPANLNSPGQIAIAGHAAAVARASERAKALGARKVVPLTVSAPFHCALMQPAQA
                     RLEPELRALRTASPRMPIVANVDAQPKREAGASVDALVEQVSSRVRWVDVVQRLGAEG
                     VTHYIEVGPGAVLAGFIKRIQKGAHIVSFSSPEQLDGVMAACSN"
     gene            complement(2835..>3783)
                     /gene="plsX"
                     /locus_tag="VFN38_03985"
     CDS             complement(2835..>3783)
                     /gene="plsX"
                     /locus_tag="VFN38_03985"
                     /EC_number="2.3.1.274"
                     /inference="COORDINATES: protein motif:HMM:TIGR00182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043811 - phosphate:acyl-[acyl carrier
                     protein] acyltransferase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HET9010945.1"
                     /translation="EGALAAARHLDVRVLLVGPEARVTSVLRPLAGGHMGALEVVDAE
                     ETVSNDEPAALALRRRPRAAIRIAADLVASGDADALVSAGHTGATVVSARSAFGMIPG
                     VDRPALAAVIPTETGSAVLLDTGASVECRPGHLVQFAVMGEAYARLVLGVERPRVGLL
                     SVGEEPSKGNELTREAHRLLKGAPVGFIGNIEGREIYSGVADVVVCDGFTGNVVLKTT
                     EGLIETVERLLGDELRGTFTSESGSVLSRRAFRRLRRRVDYSEYGGAPLLGVAGTAIV
                     AHGRSSAKAIRNAIAMAARLASSDVVAQVTRGVAVAGVS"
BASE COUNT          557 a         1368 c         1296 g          562 t
ORIGIN      
        1 gacgacccgt agcccgccac ctcggcgtag atgcgggcgc cgcggcgccg tgcggattcg
       61 agctcctcca tgatcacgac gccggcgcct tcgccgatga cgaagccgtc gcgatccttg
      121 tcgaaggggc ggctggcgcg gtgcggctcg tcgttgcgcg tcgagagcgc ccgcagcgcc
      181 gcaaacccgc cgatgctcat cggggtaatc gccgcttcgg agccgccggc aatcatggcg
      241 tcggcgtcgc cccgcttgat gatttcgtag gactcgccca ccgcgtgcgc cgacgccgag
      301 cacgccgtgc acgtggcgag gttcggcccc ttggcgccga agcggatcga cacctggccc
      361 gaggccaggt tgatgatcat cgcggggatg aagaagggcg agatgcggcg ggggccgctc
      421 tggagcagcg tctcgtgctc ccgttcaatg gtcgagaacc cgccgatgcc ggagccgatg
      481 aagaccccga cgttcgtcgc gttggcgggc gtgatcgaca ggccggaatc gtccatcgcg
      541 aactgggccg ccgcgatggc gtattggatg aagacgtcca tcttcttgac gtctttcttg
      601 tccacgaact gcagcgggtc gaacccgcgg acttcagcgg cgatctgagc ggcgaagttc
      661 gagacgtcga acttcgtgac ccgcccgacg ccgctcgtgc ccgccagcag cgcgttccaa
      721 gtagcctcgg tgccgatgcc caatgcggac accagaccga tgccggtgat gacgacccgc
      781 ctttccacgc gcgctcccgt tgggcaggct tacttcttgg acttcgcgtg cgcctcgatg
      841 tagtcgatgg cttccttgac gcgggtgatc ttttcggccg actcgtcggg gatctcgatg
      901 ccgaactcct cttcgaacgc catgaccagc tccacggtgt cgagcgagtc ggcgcccagg
      961 tcgtcgacga acgaggcatc cggcgtcact tcttcctcgt cgactccgag ctgctcaacg
     1021 atgatgctct tcaccttgtc tgctacagcc atcacatctc ctcaccgcgc ccaaacgccc
     1081 cgcgaagcgg ggctaagaga tactgtccgt agaggggcgt agctcctacg gtccaagcga
     1141 agcccctcta cgtatacatg ccgccgttga cggccagaac ctgccctgta atatacgacg
     1201 cctcatccga ggcaaggaag caaaccgcgg cggccacgtc ctcgggtgta ccgatacggc
     1261 ccagcggaat ctgggccgac cagtcgccct gcaccttgtc cgtcagcgcc tgcgtcatgt
     1321 cggtcgcgat gagccccggg gccacgacgt tcaccgtaat ctggcgggac gcgacttcgc
     1381 gggcgatcgc cttactgaag ccgaccaggc ccgccttcga cgcggcgtag ttggcctgcc
     1441 cggcgttccc catctgcccg acgacggagc cgatgctgat gatgcgcccg ccgcgctggc
     1501 ggatcatcgg cttcagtgcc gcctgcacga tggtgaaggc cgccgtgagg ttggtggcca
     1561 gcacctcgtc ccaatcggcg cgcttcatgc gcagcatgag ctgatcgcgg gcgacgccgg
     1621 cgttgttgac caggacgtcg aggcggccgt tcacggcgag cgccgcggcg atcatggcct
     1681 cgaccgacgc gctgtccgtc acgtcggcgc tcaccgccgt ggcgctgccg cccgccgcgc
     1741 ggatggcctc gacagtggcg tcggcgttgc tcccgcgggc cgcggccacg acatgggcgc
     1801 cccgcccggc cagcgccagc gcgatcgccc gtccgatgcc gcgggacgcg cccgtcacga
     1861 gcgcgacctt gccggtcagt tcgaacatgc ggccatcacg ccgtccagct gttccggact
     1921 gctgaagctc acgatgtgag cgcccttctg aatccgcttg atgaagccgg cgagcacggc
     1981 gcccggcccg acctcgatgt agtgcgtcac gccttcggcg ccgagccgct gcacgacgtc
     2041 cacccagcgc acgcgcgacg atacctgctc cacgagcgca tccaccgacg cacccgcttc
     2101 gcgctttggc tgggcatcca cgttggccac gatcggcatg cgtggcgacg cggtgcgcag
     2161 ggcgcgcagc tccggctcga gccgcgcctg cgccggctgc atcagcgcgc agtggaacgg
     2221 cgcgctcacg gtgagcggca cgaccttgcg ggcgccaagc gccttggccc gttccgacgc
     2281 ccgcgccacg gcggcggcgt ggccggcgat ggcgatctgc cccggtgaat tgagattggc
     2341 cgggctcacc acctgcccct cggcggcctc gcggcacgcc tgctcgacga gcggttcgtc
     2401 gaggccgatc acggcggcca tggcgccggt gccgaccggc acggactcct gcatgtagcg
     2461 tccacggcgc cgcacgacgg cgacgccgtc ggcgagggaa aacgtcccgg cggtcacgtg
     2521 ggccgagtat tcacccagac tgtggccagc gacgaaggcc ggctcgaggc cacgcgcctg
     2581 cagcacgcgc gcggcggcga cgctgaccgc gagaatcgcc ggctgtgcgt gctcggtgag
     2641 ggtgagcgcg tcttcgggcc ctgcggcgag catcgcgcgg agcgacgggc ccgtcgagcc
     2701 gttcgcggcg ccggcaaagg cggcctcggc ttcggcgagc gcacgctcgg cttccggata
     2761 ggcggcggcg agcgccagcc ccattcccac ggcctgcgag ccctgccccg ggaacacgaa
     2821 ggcgatcttg ccgctcacga cacccccgcc acggcgacgc cgcgcgtcac ctgggccacg
     2881 acgtcgctcg acgcgaggcg ggcggccatg gcgatcgcgt tgcggatggc tttggccgac
     2941 gagcggccgt gcgcgacgat ggcggttccc gccacgccca gcagcggcgc gccgccgtac
     3001 tcggaatagt ccacgcgccg gcgcaggcgc cggaaggcgc ggcgcgacag caccgagccg
     3061 ctctcgctcg tgaaggtccc gcgcagctcg tcgccgagca gccgctccac ggtctcgatg
     3121 agcccctcgg tcgtcttcag caccacgttg ccggtgaagc cgtcacacac cacgacgtcg
     3181 gccacgccgg agtagatctc gcgcccttcg atgttgccga tgaacccgac cggtgcgccc
     3241 ttgagcagcc ggtgcgcttc gcgcgtgagc tcgttgccct tgctcggctc ctcgccaacc
     3301 gacagcagcc cgacgcgcgg gcgctccacg ccgagcacca ggcgcgcgta ggcctcgccc
     3361 atcacggcaa attggaccag atgccccgga cggcactcga cgctcgcgcc ggtgtcgagc
     3421 agcaccgcgg agccggtttc ggtgggaatc acggcggcga gggcggggcg atccacgccg
     3481 ggaatcatgc cgaatgccga gcgggcggac acgacggtgg caccggtgtg ccccgcgctg
     3541 accagcgcgt cggcatcgcc cgaggccacg aggtcggcgg caatgcggat ggccgcacgc
     3601 gggcggcggc gcagcgcgag cgcggcgggc tcgtcgttcg acacggtctc ttcggcgtcc
     3661 acgacctcga gcgcgcccat gtgtccgccg gcgagcggac gcagcacgga cgtgacgcgg
     3721 gcttcgggcc ccacgagaag tacgcggacg tcgagatggc gtgcggcggc cagggcccct
     3781 tcg
//
LOCUS       DASSYW010000254         2046 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_55847, whole genome shotgun sequence.
ACCESSION   DASSYW010000254 DASSYW010000000
VERSION     DASSYW010000254.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2046)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2046)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2046
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_55847"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            335..>2046
                     /locus_tag="VFN38_03990"
     CDS             335..>2046
                     /locus_tag="VFN38_03990"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HET9010946.1"
                     /translation="MIGTTVGKYRILDKLGRGGMGTVYKAVDETLDREVAIKVLNHDL
                     TDADVLKRFRGEAVTLARLNHPGIATIFELHQQQDDLLMVMEFVRGETFHDFSDRMGP
                     IAPPHAAHLCMQVLDALAHAHRAGVVHRDLKPANLMIAENGAVKVMDFGIARVLGTEH
                     FTHGGYMMGTPAYMAPEQVLGREIDGRADLYSVGVVLYRLLSGRLPFNAETAISMVQM
                     QISEPPTPILACKPDLPTWCAVVVERALAKSPSDRFQSAEEFRTALLTAVTPQALGEM
                     PTLATPTTGLALDPDATLPHRTPTPVRAAGAQASSGAYSVQGVRAAMQPPTPTPTSVP
                     PAERTGTTVVLGRTHLAAMGVGLLVLTVGVAVLAFAALRGGRAPVTAPQTPAQQELAT
                     QGTSGPPATSTTAAGDQSIPPPAPPPPAAVPPAARPSATSPVAATPATPATGTVATAG
                     ATPAGTKPAGLVKSATPGVTPTDGGRGAAPATAKETANIPSASPMAPPPAASALPMAT
                     FSQVRVLVTEGDKAREREGVLQIGDGRVAVVNNAAGGTAIMSLPTSALTGVYYARSKQ
                     PKWN"
BASE COUNT          319 a          747 c          681 g          299 t
ORIGIN      
        1 aacggcgtca ttcacgtgat cgacacggtc atccttcccg agtagccgca ccccgcaacc
       61 gcggcggttg cgcacaccgc ggcggccggc agacttttgt cctccggccg cccgtcatcc
      121 gtcgccgccg ccgccgactc ctggcgcgtt ttcagcgacc gatccggacg ccgcgctgcg
      181 gcaactccaa gcacatctgt atgttcgcgc ccgcttacaa acctgcattc gcagcaggca
      241 cggatcacgc tattctgcgc gcggcagttt attgacaacc ggggatcgcc actcctaaac
      301 tggcgaactc ggtcggtttt cagttctcca actcatgatc ggcaccactg tcggcaagta
      361 ccgcatcctc gacaagcttg gtcgcggcgg tatgggcacc gtctacaagg cggtcgacga
      421 gaccctcgat cgcgaggtcg cgatcaaggt gctcaatcac gacctgacgg atgccgacgt
      481 gctgaagcgc tttcgcggcg aggcggtgac gctcgcgcgc ctcaatcatc ctggcatcgc
      541 gacgattttc gagctgcacc agcagcagga cgacctgctg atggtgatgg agttcgtacg
      601 cggcgagacg ttccacgatt tctcggatcg catgggcccg atcgcgccgc cgcacgccgc
      661 ccacctgtgc atgcaggtgc tcgacgcgct cgcgcacgcg catcgcgccg gcgtcgtgca
      721 ccgcgatctc aagcccgcca atctgatgat cgcggagaac ggcgcggtca aggtcatgga
      781 cttcggcatc gcgcgcgtgc tcggcaccga gcacttcacg cacggcggct acatgatggg
      841 gacgccggcg tacatggcgc ccgagcaggt tctcggcagg gagatcgacg ggcgcgcgga
      901 tctctactcc gtaggcgtgg tgctttatcg tctgctctcc ggccggctgc cgttcaacgc
      961 cgagacggcg atctcgatgg tgcagatgca gatctccgag ccgccgacgc cgatcctcgc
     1021 ctgcaagccg gatctgccga cctggtgcgc cgtcgtcgtc gagcgcgcgc tcgccaagtc
     1081 gccgtcggat cgcttccaga gcgcggaaga gttccgcacc gcgctgttga cggcagtgac
     1141 gccgcaggct ctcggcgaaa tgccgacgct ggcgacgccg accaccggcc tcgccctcga
     1201 tccggatgcg acgctgccgc atcgcacgcc gacgccggtg cgcgcggccg gcgcgcaggc
     1261 gtcgagcggc gcctactccg tgcagggcgt gcgcgcggcg atgcagccgc cgacgccgac
     1321 gccgaccagc gttccgccgg ccgagcgcac cggcaccacc gtcgtcctgg gacgaacgca
     1381 cctcgcggcg atgggcgtcg ggctgctcgt cctcacggtc ggtgtcgccg tgctcgcctt
     1441 cgcggcgctg cgcggcggcc gggcgcccgt gacggcgccg cagacgccgg cgcagcagga
     1501 gctggcaacc cagggcacga gtggtccgcc ggcgacgtcg accaccgccg ccggcgatca
     1561 aagcatcccg ccgcctgcgc cgccgccacc cgccgcggtg cctcctgcgg ccagaccgtc
     1621 agcgacgtct cctgtcgccg cgacgcccgc gacgccggcg accggaacgg ttgccaccgc
     1681 aggggcaacg cctgccggga cgaagccggc gggcctggtc aagagcgcga ccccaggcgt
     1741 gacgccgacc gacggcgggc gcggcgccgc accggcgaca gcgaaagaga ccgccaacat
     1801 tccttcggca tcgccgatgg cgccgcctcc agccgcatcg gcgctgccga tggcaacctt
     1861 cagccaggtg cgtgtgctcg tcaccgaagg cgacaaggcg agagagcgcg agggcgtcct
     1921 gcagatcggc gacggccgcg tcgcggtcgt caacaacgcc gccggcggca cggcgatcat
     1981 gtcgctgccg acgtcggcgc tgacgggcgt ctattacgcg cgctcgaagc agccgaagtg
     2041 gaatga
//
LOCUS       DASSYW010000255         5238 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_485450, whole genome shotgun sequence.
ACCESSION   DASSYW010000255 DASSYW010000000
VERSION     DASSYW010000255.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 5238)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5238)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5238
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_485450"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..741
                     /locus_tag="VFN38_03995"
     CDS             <1..741
                     /locus_tag="VFN38_03995"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HET9010947.1"
                     /translation="LGKALGRRRAGVAIATKFGHKTWHPDRGAHPAYVRRAVEASLRR
                     LNTDVIDLYQLHTPDPLEPIADTLGALDDLVKAGKVREIGCSQFSVEQLREAAAAVPP
                     GAARFVSVQNEYSLLRRAPERGVLQYCEQHGMAFLPFFPLASGLLTGKYRRGKGVPEG
                     SRIADWFEGKISKQDLDRIEGLIAFAESRGHTILDLAFSWLRAHPVVASVIAGATMPE
                     QVQANVAAAWRLTSQEMAEIDRIAPLDG"
     gene            782..2044
                     /locus_tag="VFN38_04000"
     CDS             782..2044
                     /locus_tag="VFN38_04000"
                     /inference="COORDINATES: protein motif:HMM:NF016196.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF445 domain-containing protein"
                     /protein_id="HET9010948.1"
                     /translation="MLVVRDDTEKALQYAIMRRRATALLAAFAVLFALSAAVRHLYPG
                     VSPFWIGLLRATAEAAMVGGVADWFAVTALFRHPMGIPIPHTAIVAQRKDRIGRSLGN
                     FVGNNFLAREVIARQLAGMKLGERAARWLAEPHHQRRVARAIAGGLARAVEAVPDDEL
                     QSSMQGVVVTQLRKVHVAPLLADLLGLATTDDRHQEFLDRLVKLVNRIVEENKELIRV
                     RIAEESPWWVPGAVDDKLYQKIVSGIERTLAEVAADDAHPLRAQFDKALRDFVEKLHT
                     SPETIARAEAMKERLLEHPAVGELSGALLATGRTALAKYAGPDAPTPEPLERALGAVA
                     ERALGNEALLRDVDESVERLVLSVVDQYRPEVAELIARTVEGWDATEASARIEVQVGR
                     DLQFIRINGTLVGALVGMLLYLVTVLIG"
     gene            2073..3548
                     /locus_tag="VFN38_04005"
     CDS             2073..3548
                     /locus_tag="VFN38_04005"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro aminopeptidase"
                     /protein_id="HET9010949.1"
                     /translation="MIRRLALAGLLLPGLLAAQSTQEFERRRMQFATRVPDGVIVALG
                     AHEPAQDYLSFYQAPSFFYLTGLKEPDAALVMVKKGPQVSWATIFVQPRQPSREVWTG
                     ARLGVKAVTDLTSIRGRSVAEFPAALDSLAKTGMPFHVVGEFGLHDAGDGMATRSPDE
                     QLMDALQKKYPALKITPVNGLVEELRGTKSPAELALIRQAVDITVRAQKEAIAALKDG
                     MNEFELQALIEYTFRRNGADRPSFSTIVGSGPNATTLHYNANDRFIDINDLVVMDIGA
                     SYKGYAADVTRTVPASGRFSPTQRDVYTIVREAQAAAERQAKVGAPSRLMNDSANVVI
                     ANGLARLRLIESPDATYDCSTDATPRQCPQYRLYYMHGLGHGIGLEVHDPEQYYYTAK
                     LGPGSAFTLEPGIYVREHVLEEIPDTRRNREIAAKLLPMVTFYRNIGVRIEDDYVVTE
                     QGVEWISRAPREIAEIEALMKAGSTGPAPRDRALVERYRAK"
     gene            3545..>5238
                     /locus_tag="VFN38_04010"
     CDS             3545..>5238
                     /locus_tag="VFN38_04010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010950.1"
                     /translation="MTDGAAERSEVVALPAADASSRLAAVVRSPRVLAALALVYSALP
                     ALLREGGDGASRLRILAASGALLGAIPAVGVAQRLARPLRMATLMAGGVAGALLFVTV
                     VARGLGGTPTAADLLGWPVLFPALAFAAAVTLLLTAVGAADDDRSLLPVAAALALSAF
                     GIVPLANALAPLAVGVWFGGMSTYWMLGTASLVLLALAVAKWLPRRVEAVAGAIAGGV
                     MRMPARWFVGGAALLALAAAATLTIVLFARQPHNADEVAQLWHARILLSGRLSLPVDP
                     NPEFFGMDNVIDRGRWYSQFPIGGPAFLAVGLAVRAAWLVNPVLLALTYPNVYAFARR
                     AYDEATARAAVLVLLVSPFAMFMSASYMNHVPTMWLASVALAQLAVWYDAEDRAALWR
                     SALLIGLALGTAAAVRPLDAAVMAVVVGAMQLWCSRTSGVRARSLALQAIAGAVPVAL
                     LLLANWRTTGAPLRFGYEVLYGSAHQLGFHTDPYGTAHTPIRALTFASKYLLELDVAL
                     FESPLPAVGVIVAGLLALRRPSRWDRLLVAFVALQLVAYALYWHEGEFRGPRFLFTA"
BASE COUNT          704 a         1854 c         1869 g          811 t
ORIGIN      
        1 ctcgggaagg ccctcggccg ccggcgtgcc ggcgtcgcga tcgccacaaa gttcgggcac
       61 aagacctggc atcccgaccg cggcgcgcat ccggcgtacg tccgccgcgc cgtggaggcg
      121 agcctccggc gcctgaacac cgacgtcatc gatctctacc agctccacac ccccgatccg
      181 ctcgagccga tcgccgacac gctcggcgcg ctcgacgacc tggtgaaggc gggcaaggtg
      241 cgcgagatcg gatgctcgca gttctcggtg gaacagttgc gcgaggccgc ggcggcggtg
      301 ccaccgggcg ccgcgcggtt cgtgagcgtg cagaacgagt acagcctgct gcggcgcgcg
      361 cccgaacgcg gcgtgctgca gtactgcgag cagcacggga tggcgttcct cccgttcttc
      421 ccgctcgcga gcgggctgct gaccggcaag tatcgccgag ggaaaggggt gccggagggc
      481 tcgcgcatcg ccgactggtt cgagggcaag atcagcaagc aggacctcga ccggatcgag
      541 gggctgatcg cgttcgcgga gtcgcgcggc cacaccatcc tggacctcgc gttctcgtgg
      601 ctgcgcgcgc atcccgtcgt cgcctcggtc atcgccggcg ccacgatgcc cgaacaggtg
      661 caggcgaacg tcgccgccgc gtggcggctg acgagccagg agatggccga aatcgatcgg
      721 atcgccccac tggacgggtg acgggcgggc gcccgaccgc gccgctcggt attttcttcc
      781 gatgctggtc gtacgcgacg acaccgagaa ggcactccag tatgcgatca tgcggcgtcg
      841 cgccacggcg ctgctcgccg cgttcgccgt gctgttcgcc ctctccgcgg cggtgcggca
      901 tctctacccg ggagtctccc ccttctggat cgggctcctg cgcgcgacgg ccgaagcggc
      961 gatggtgggc ggcgtcgccg actggttcgc cgtcaccgcg ctcttccgtc acccgatggg
     1021 gatcccgatc ccccacacgg cgatcgtcgc gcagcgaaag gatcgcatcg ggcgcagcct
     1081 cggcaacttc gtcgggaaca acttcctggc gcgcgaggtg atcgcccggc agctcgccgg
     1141 catgaagctg ggcgagcgcg ccgcgcggtg gctggccgag ccgcatcacc agcgccgcgt
     1201 ggcgcgcgcg atcgccggcg gtctggcgcg cgcggtggag gcggtcccgg acgacgagct
     1261 gcagtcgagc atgcagggcg tcgtcgtgac gcaactgcgg aaggtgcacg tggccccgct
     1321 cctggccgac ctcctcggcc tcgccacgac cgacgaccgg caccaggagt ttctcgaccg
     1381 gctcgtgaag ctcgtgaacc ggatcgtcga ggagaacaag gagctgatcc gcgtccgcat
     1441 cgccgaggag agcccgtggt gggtgcccgg ggcggtggat gacaaactct atcagaagat
     1501 cgtctctggt atcgagcgca cgctggccga ggtcgccgcc gacgacgcgc atcccctgcg
     1561 cgcgcagttc gacaaggcgc tgcgcgattt cgtcgagaag ctgcacacct cccccgagac
     1621 catcgcgcgt gccgaggcca tgaaggaacg gctcctggag catcccgcgg tcggcgagct
     1681 gtccggcgcg ctcctggcca ccggccgcac ggcgctggcg aagtacgccg gccccgacgc
     1741 gccgacgccg gagcccctgg agcgcgcgct gggcgcggtg gccgagcgcg ccctggggaa
     1801 cgaggccctg ctccgcgatg tagacgaatc ggtggagcgg ctcgtcctct ccgtggtgga
     1861 ccagtatcgg cccgaggtgg ccgagctgat cgcacggact gtcgaaggat gggacgccac
     1921 cgaagcctcc gcccgcatcg aggtccaggt cggccgcgac ctgcagttca tccgcatcaa
     1981 cggcacgctc gtcggagcgc tcgtcgggat gctgctctat ctggtgacgg tcctcatcgg
     2041 ttgaggccgt cgtttcactc caaggaggat ccgtgatccg tcgtctcgcg ctcgccggcc
     2101 tgctgctgcc cgggctgctc gccgcccagt ccacgcagga gttcgaacgg cgccgcatgc
     2161 agttcgccac tcgcgtgccc gacggcgtca tcgtggcgct cggcgcccac gagccggcgc
     2221 aggactacct ctcgttctac caggcgccgt cgttcttcta cctcaccggg ttgaaggagc
     2281 cggatgccgc actcgtgatg gtgaagaagg ggccgcaggt ctcgtgggcg acgatcttcg
     2341 tgcagcccag gcagccgagt cgtgaggtgt ggacgggcgc ccggttgggg gtgaaggccg
     2401 tcaccgacct cacgagcatc cgtggccgtt cggtggccga gttccccgcc gcgctcgact
     2461 cgctggcgaa gaccggcatg cccttccacg tcgtcggcga gttcggcctg cacgatgccg
     2521 gcgacggcat ggcgacccgc tcgcccgacg agcagctcat ggacgcgcta cagaagaagt
     2581 atccggcgct caagatcacg ccggtgaacg ggctggtgga ggagctgcgc ggcaccaaga
     2641 gcccggcgga gctggcgctc atccggcagg ccgtcgacat caccgtgcgg gcgcagaagg
     2701 aggcgatcgc cgcgctgaag gacggcatga acgagttcga gctccaggcg ctgatcgagt
     2761 acaccttccg ccgcaacggc gccgaccggc cgtcgttctc cacgatcgtg ggctcgggcc
     2821 ccaacgccac cacgctgcac tacaacgcca acgaccgctt catcgacatc aacgacctgg
     2881 tcgtgatgga catcggcgcg tcgtacaagg gctacgccgc cgacgtgacg cgcacggtgc
     2941 cggcgagcgg acgcttctcg ccgacccagc gcgacgtgta cacgatcgtg cgggaagccc
     3001 aggcagccgc ggagcgccag gcgaaggtcg gcgcgccgtc gcggctcatg aacgattcgg
     3061 ccaacgtggt catcgcgaac gggctcgcca ggctgcgcct catcgagtct cccgacgcca
     3121 cgtacgattg cagcaccgat gcgacgccgc ggcagtgccc gcagtaccgc ctgtactaca
     3181 tgcacgggct cggacacggc atcgggctgg aggtgcacga tcccgagcag tactactaca
     3241 cggcgaagct cgggcccggc agcgcgttca cgctggagcc gggcatctac gtgcgcgagc
     3301 acgtgctcga ggagattccc gatacgcggc gcaatcgcga gatcgccgcg aagctgctgc
     3361 ccatggtgac cttctaccgg aacatcggcg tccgcatcga ggacgactac gtcgtcaccg
     3421 agcagggagt ggagtggatc tcgcgcgccc cgcgcgagat cgccgagatc gaggcgctga
     3481 tgaaggcggg gagcaccggc cctgccccgc gcgaccgcgc cctcgtggag cgctaccggg
     3541 cgaaatgacg gacggcgccg ccgagcggag cgaggtcgtg gcgctgccgg cggcggacgc
     3601 gtcgtcgcgg ctcgcggcgg tggtgcggtc gccgcgggtg ctcgccgcgc tcgcgctcgt
     3661 gtactcggcg ttgccggcgc tgctgcggga gggcggcgac ggcgcgtcac ggctgcggat
     3721 cctcgcggcg tcgggagcgc tgctgggcgc catcccggcg gtcggcgtcg cgcagcgact
     3781 cgcgcgcccg ctccggatgg cgacgctgat ggcggggggc gtcgcgggtg cgctgctgtt
     3841 cgtcacggtc gtggctcgcg gcctgggtgg cacgccgacc gcggccgacc tcctgggatg
     3901 gcccgtgctc ttcccggcgc tggccttcgc cgcggcggtg acgctcctcc tcaccgccgt
     3961 cggcgcggcg gatgacgatc gctcactgct tccggtggcg gcggcgctcg ccctctccgc
     4021 attcgggatc gtgccgctcg ccaacgccct cgcgccgctc gccgtgggcg tgtggttcgg
     4081 cggcatgagc acctactgga tgctcggcac cgcgagcctc gtcctgctgg cgctggcggt
     4141 ggcgaagtgg ctgccccgac gggtcgaggc ggtggcggga gcgatcgcgg gcggcgtgat
     4201 gcggatgccg gcccgctggt tcgtgggggg cgccgcgctc ctcgcgctgg cggcggcggc
     4261 gacgctcacc atcgtcctct tcgctcggca gccgcacaac gcggacgaag tcgcgcagct
     4321 ctggcacgcg cgcatcctcc tctccggccg tctctccctt cccgtcgatc ccaatcccga
     4381 gttcttcggg atggacaacg tcatcgatcg cgggcgctgg tattcgcagt tcccgatcgg
     4441 cggtccggcc ttcctcgccg tcgggctcgc ggtccgcgcc gcgtggctcg tgaatccggt
     4501 cctgctcgcg ctcacctacc cgaacgtgta cgccttcgcg cggcgcgcgt acgatgaagc
     4561 gacggcgcgc gccgccgtgc tggtgctgct cgtttcgccc ttcgcgatgt tcatgtcggc
     4621 gagctacatg aaccacgtcc ccacgatgtg gctggcgagc gtggcgctcg cgcagctcgc
     4681 ggtgtggtac gatgccgagg atcgcgccgc gctgtggcgc tcggcgctgc tcatcgggct
     4741 ggcgctcggc accgcggcgg ccgtgcgccc gctcgacgcc gcggtgatgg cggtcgtcgt
     4801 gggcgcgatg cagctctggt gctcgcgcac gagcggggtg cgtgcacggt cgctggcgct
     4861 ccaggcgatc gccggcgccg tgccggtggc gctcctgctg ctggcgaact ggcgcaccac
     4921 cggcgcgccc ctgcgcttcg ggtacgaggt gctgtacggc agcgcgcacc agctcggctt
     4981 ccacaccgac ccgtacggca cggcccatac gcccattcgt gcgctgacct tcgcgtcgaa
     5041 gtacctgctc gagctcgacg tcgcactgtt cgagtctccc ctgccggccg tgggggtgat
     5101 cgtcgccggg ctgctcgccc ttcgccgtcc gtcgcgctgg gatcggctgc tggtcgcctt
     5161 cgtcgccctt cagctcgtgg cctatgcgct ctactggcac gaaggggagt tccggggccc
     5221 gcggtttctc ttcacggc
//
LOCUS       DASSYW010000256         2848 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_721024, whole genome shotgun sequence.
ACCESSION   DASSYW010000256 DASSYW010000000
VERSION     DASSYW010000256.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2848)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2848)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2848
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_721024"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            309..977
                     /locus_tag="VFN38_04015"
     CDS             309..977
                     /locus_tag="VFN38_04015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010951.1"
                     /translation="MLAAAGNDSQARAALSSLCQTYWYPLYAYLRRRGLDPEDARDLT
                     QGFLTSLIERQDFEGLRQDRGRFRAFLLASLKHYLANWSARERTQKRGGGWRMVRLEN
                     AEGRYVAEPTDHATPETLFERRWALTVVERLLADLRAQWSAQGRASEFDELKACLLGQ
                     APAGGYAAVAARLETSEGAVKAAVHRLRRRFQSLLRQRVAETVADGRDVEDEIRHLIQ
                     ALSA"
     gene            1227..>2848
                     /locus_tag="VFN38_04020"
     CDS             1227..>2848
                     /locus_tag="VFN38_04020"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HET9010952.1"
                     /translation="MDGQLWGPYRVIRLLGRGGMGEVYEAEQLETGRRLALKVLRAAL
                     RGDEDRARFLREGQLAASISHAHTVYIFGSEEVGGAPAITMELLAGGTLKDRVSTEGP
                     MPPSAAVSAVLDIIGGLDAAQAAGILHRDIKPSNCFVDADGAVKVGDFGLSISTLTRD
                     VRHELAMSGFEGTPQFAAPEQLRGEPLDVRADIYAVGATLYYLLTGRPPLDAADLREL
                     VSKVAAEKPPSARVLRRDIPRGLAGVVQQCLAKAPAGRPQSYAELADLLRPYGSADDV
                     PAPLGARFIAWIADAVVLAIMTWLLSVSAWTAATLGSATTLLQLASWSWLTGAIYYFV
                     LEGCWGASLGKRLMGLRVSSRASSGWWPRVGLRTAVFHTPRLIHTLLMLAATGGLPAP
                     SVGYTADAAPSGWRWNLPPYALVSLLLTVLLWLLTILLFSTARRGNGWTGVHELLSRT
                     RVVQRNVRAVASAAPKASPVDLDPALSSLRRVGPYAAHTAVGETGAGRLFVGIDPILR
                     RHVWIHEVTPGTPPVDAVRRDVSRPGRLYWLAG"
BASE COUNT          408 a          929 c         1004 g          507 t
ORIGIN      
        1 gcgttcttcg caacgagcgt gcacgccgtg ggctacctgg cggtgaccgc gttcatcgcg
       61 gtgctcgtgt tcgagaagtt gggcgtcggc atcctgcgcc gcgcgtggtt caacctcgat
      121 ctgatctggt cggccgcgct catcgcgacg ggcacgctga cgctgatgcg gtaaaacggt
      181 ttcacgggcg tggactcagt gagcgcggac aggatgaggt gcggcattac gggacatcag
      241 gtggcgagcg gcgcccatct ggcgtacgat gcgtcgccgt gcccttcgaa acgacgcggt
      301 ggagtctcgt gctggcggcc gccgggaacg actcgcaggc gcgtgcagcc ctctcttcgc
      361 tctgccagac ctactggtat ccgctctacg cctacctccg ccgccgaggc ctcgacccgg
      421 aagatgcgcg cgacctgacg caggggttct tgacatcgct catcgagcgg caggacttcg
      481 agggactacg tcaggatcgg ggccgattcc gcgcgttcct tctggcgtcc ctaaagcact
      541 acctggccaa ctggtcggcc cgtgaacgga cgcagaagcg cggcggcggc tggcggatgg
      601 tccggctcga gaacgctgaa ggccggtacg tggccgaacc gacggatcat gcgacccccg
      661 aaacgctctt cgagcggcgc tgggcattga cggtcgtcga acgcttgctc gccgaccttc
      721 gcgcccagtg gtcggcccag ggacgcgcct ccgagttcga tgagctcaaa gcgtgcctgc
      781 tcgggcaggc gccggctggc ggctacgccg cggtggcggc ccgtctcgag acgtcggagg
      841 gcgcagtcaa agccgcggtg catcgtctca gacgccggtt tcaatccctg ttgcgccagc
      901 gcgtcgcgga aaccgttgcc gatgggcggg acgtcgagga cgagatccgt catctcattc
      961 aggcgttgag tgcgtaaccc cgggcgccgg tcctgtctga tccagatgaa cggccaaatc
     1021 tggcctcaga ggaaccgggg gatgtgatgt ccgaaacggt cacctacctg tcgcgacgtt
     1081 gtccacggtg cggacggcaa ctgccgcctg atgcagccga gggtctgtgt gcgtcgtgcc
     1141 tgctgacggc tggggcggaa acgctcactg ggtcaagcga gccgagtgcg actggcgaca
     1201 cgtcgttgcc tggcggaccc cgcctcgtgg acgggcaact ctgggggccg tatcgggtca
     1261 tccgcttgct cggccgcggt ggaatggggg aggtgtacga ggcggagcaa ctcgagacag
     1321 gacgacgcct ggcgctgaaa gtcttgcgcg ccgcgctgcg gggcgacgaa gatcgtgcac
     1381 ggttccttcg tgaggggcag ctcgcggcat cgatcagcca cgcgcacacg gtctacatct
     1441 tcggcagcga agaagtgggc ggcgcgcccg cgatcacgat ggagctgctc gccggcggca
     1501 cgctgaaaga ccgcgtctcg acggaggggc cgatgcctcc atccgccgcc gtatcggccg
     1561 tgctcgacat catcggcggc ctcgacgcgg cgcaggcggc ggggattctc caccgcgaca
     1621 tcaagccgtc gaattgcttc gtcgacgcgg acggcgccgt caaggttggt gatttcggac
     1681 tctccatctc cacgctcaca cgcgacgtgc ggcacgagct cgcgatgtcc gggttcgagg
     1741 gcacgccgca attcgccgcg ccggagcagt tgcgaggcga gccgctcgac gttcgcgccg
     1801 acatctacgc cgtcggcgcg acgctctact acctcctgac gggacggccg ccgctcgacg
     1861 cggcggacct ccgtgagctc gtctcgaagg tcgccgctga gaagccgcca tcggcgcgtg
     1921 tgctgcggcg tgacattccg cgcggactcg cgggcgtcgt gcagcagtgt cttgcgaagg
     1981 cgccggccgg acggccgcag tcgtacgccg agctggcgga tctcctgcgg ccgtacggat
     2041 ccgcggatga cgtacctgcc ccgctcgggg cgcgcttcat cgcctggatc gccgacgcgg
     2101 tcgtcctcgc gatcatgacg tggctgctca gtgtgtcggc gtggacggcc gcgacgctcg
     2161 gatccgcgac cacgctgctt caattggcgt cgtggtcgtg gctcactggg gccatctact
     2221 acttcgtcct cgaaggctgc tggggcgcct cgctggggaa gcggctcatg ggcttgcgtg
     2281 tgagctcgcg cgcgagcagc ggctggtggc cgcgcgttgg cctgcgcacc gccgtgttcc
     2341 atacgcctcg gctcattcac actcttctca tgctggccgc cacgggcgga ttgccggccc
     2401 cgagcgtcgg gtatacggcg gatgctgcgc cgagcggatg gcgctggaac ctgccgcctt
     2461 acgcgttggt gtcgttgcta ttgaccgttc tgctgtggct cttgaccatc ctgctgttct
     2521 cgaccgcccg gcgtggcaac gggtggactg gtgtccacga gctgctgagc cgtacgcgtg
     2581 tcgtgcagcg gaacgtcagg gccgttgcat ccgccgctcc gaaggcgtca cctgtcgatc
     2641 tcgatcccgc cctttcgtcg ttgcgacgcg tcggaccgta cgccgcgcat acggcggtcg
     2701 gtgagaccgg cgccggacga ttgttcgtcg ggatcgatcc gatccttcgc cgtcatgtat
     2761 ggattcacga ggtcacgccg gggacaccgc cggtcgatgc ggtgcggcgc gacgtgtcaa
     2821 ggccagggcg cctgtactgg ctcgcggg
//
LOCUS       DASSYW010000257         2237 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1791466, whole genome shotgun sequence.
ACCESSION   DASSYW010000257 DASSYW010000000
VERSION     DASSYW010000257.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2237)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2237)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2237
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1791466"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1836)
                     /locus_tag="VFN38_04025"
     CDS             complement(<1..1836)
                     /locus_tag="VFN38_04025"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HET9010953.1"
                     /translation="MRTLYRYLRPYWRFVILALFLAAVNQIFSLLDPLIFRHVIDSYA
                     TQYDKYTRAEFGRGVALLLGMAVGVAFISRVAKNFQDYFVNVVVQRVGADLYSDGIRH
                     SLALPFQTFEDQRSGETLGKLQKVRSDTERFIAAFVNMVFTTLVGVIFVMVYAFKAHW
                     AIAPAFFLTVPMLAVLSSVLSKRIKTIQKVIVAETTALAGATTESLRNIELVKSLGLA
                     KQEELRLNATTEKILKLELKKVRYLRSLSFIQGTAVNFLRTCILFLMLYLIFEKQITV
                     GQFFSLLIYSFFIFGPLQELGNVINIYRETEASLANFDAIFRIPVDPKPAHPVAVDDL
                     RTLAFADVSFTHATAAAPALAGVTFQVQRGQTVAFVGPSGAGKTTLVKLLVGLYRPGS
                     GAILYNGVPSDRVDLDRFRERIGFVTQDAQLFSGTIRENLLFVRPDATDAQCLDVLRR
                     AAASSLLTRADQGLDTVIGEGGMKISGGEKQRLSIARALLRDPHLLVFDEATSSLDSL
                     TEEEISRTMRDVAEAADVITVLIAHRLSTVMHADRIHVLERGRIVEEGRHDELLARTG
                     LYYAMWRQQVGERRSDTPASVPALAGVVPATVIAKMKARSPARTKL"
     gene            complement(1879..>2237)
                     /locus_tag="VFN38_04030"
     CDS             complement(1879..>2237)
                     /locus_tag="VFN38_04030"
                     /inference="COORDINATES: protein motif:HMM:NF015558.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="putative sulfate exporter family transporter"
                     /protein_id="HET9010954.1"
                     /translation="LTRVLMLGPVVLALSLVMRRRGATPHGSVALGRLVPWFIVGFLL
                     LAGMRATGVVPAAAVAWARWISGAMTVVAMAALGLGVDVRVLGRVGRSVTATATGALL
                     LLLAMSVALVRGLGIG"
BASE COUNT          378 a          760 c          784 g          315 t
ORIGIN      
        1 gagcttcgtc ctcgcgggcg acctcgcctt catcttcgcg atgaccgtcg ccggcaccac
       61 gccggcgagc gcgggcacgg aggcaggggt gtccgacctc cgctccccca cctgctgccg
      121 ccacatggcg tagtacaacc ccgtgcgcgc cagcagctcg tcgtgccgtc cctcctccac
      181 gatccgcccg cgctccagca cgtggatccg gtcggcgtgc atcacggtgc tcaggcggtg
      241 cgcgatcagc accgtgatca cgtcggccgc ttcggccacg tcgcgcatgg tgcggctgat
      301 ctcctcctcg gtgagcgagt ccagcgagct ggtggcctcg tcgaacacga ggaggtgcgg
      361 atcacgcagg agggcgcgcg cgatggacag ccgctgcttc tcgccgccgg agatcttcat
      421 ccccccctcc ccgatcaccg tgtcgagccc ctggtcggcc cgggtgagga gggagctcgc
      481 cgcggcgcgg cggagcacgt cgaggcactg cgcgtcggtg gcgtcggggc gcacgaagag
      541 caggttctcg cggatcgtcc cgctgaacag ctgcgcatcc tgcgtcacga agccgatgcg
      601 ctcccggaag cggtcgaggt ccacgcggtc gctcggcacc ccgttgtaga ggatcgcccc
      661 cgagccgggc cggtacagcc ccacgagcag cttcacgagc gtggtcttcc ccgcccccga
      721 cggcccgacg aacgccaccg tctgcccgcg ctgcacctgg aaggtcaccc cggccagcgc
      781 cggcgcggcg gcggtcgcat gggtgaagct cacgtcggcg aacgccaggg tgcgcaggtc
      841 gtccacggcc acggggtgcg ccggcttcgg atcgaccggg atccggaaga tcgcgtcgaa
      901 gttggcgagc gacgcctccg tctcgcggta gatgttgatg acgttcccca gctcctggag
      961 cgggccgaag atgaagaacg agtagatgag cagcgagaag aactgcccca ccgtgatctg
     1021 cttctcgaag atcaggtaga gcatcaggaa caggatgcag gtgcggagga agttcaccgc
     1081 ggtgccctgg atgaacgaca gcgacctgag gtacctgacc ttcttgagct cgagcttgag
     1141 gatcttctcg gtggtggcgt tgagccggag ctcctcctgc ttcgcgaggc cgaggctctt
     1201 caccagctcg atgttgcgca gcgattcggt ggtcgcgccg gccagcgcgg tcgtctcggc
     1261 gacgatcacc ttctggatcg tcttgatgcg cttgctcagc accgagctga ggacggccag
     1321 catcggcacg gtgaggaaga aggcgggggc gatggcccag tgcgccttga aggcatacac
     1381 catgacgaag atcacgccga cgagcgtggt gaacaccatg ttcacgaacg cggcgatgaa
     1441 ccgctccgta tcggagcgga ccttctggag cttgccgagg gtctcgccgc tccgctggtc
     1501 ctcgaacgtc tggaagggga gcgcgagcga gtggcggatg ccgtcggagt acaggtctgc
     1561 cccgacgcgc tgcacgacga cgttgacgaa gtagtcctgg aagttcttgg cgacgcgcga
     1621 gatgaaggcg acgcccaccg ccatgccgag caggagggcg accccccggc cgaactccgc
     1681 ccgcgtgtac ttgtcgtact gcgtcgcgta gctgtcgatg acgtgccgga agatcagcgg
     1741 atcgagcagc gagaagatct ggttgaccgc cgcgaggaag agcgcgagga tcacgaagcg
     1801 ccagtacgga cgcaggtagc ggtagagggt gcgcatgtgg ggagaataac ccgaagcggg
     1861 cgaggatggt tcggcgggtc agccgatccc cagcccgcgc acgagcgcga cgctcatcgc
     1921 cagcagcagc agcagggcgc cggtggcggt ggcggtcacc gagcggccga cccggccgag
     1981 cacgcggacg tccaccccga gcccgagggc cgccatggcc accacggtca tcgcgcccga
     2041 gatccagcgc gcccaggcca ccgccgccgc cggcaccacg ccggtggccc gcatcccggc
     2101 gagcagcagg aaccccacga tgaaccaggg gacgagccgc ccgagcgcca cggagccgtg
     2161 cggcgtcgcc ccgcgccggc gcatcaccag ggagagtgcc agcacgacgg gcccgagcat
     2221 cagcacgcgc gtgagct
//
LOCUS       DASSYW010000258         2240 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1257201, whole genome shotgun sequence.
ACCESSION   DASSYW010000258 DASSYW010000000
VERSION     DASSYW010000258.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2240)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2240)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2240
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1257201"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            66..1586
                     /locus_tag="VFN38_04035"
     CDS             66..1586
                     /locus_tag="VFN38_04035"
                     /inference="COORDINATES: protein motif:HMM:NF017568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IG family 5'-nucleotidase"
                     /protein_id="HET9010955.1"
                     /translation="MSVGAPVKSGETPAPSTSREPTAAQPLDVPRRNRVYVNRNLRLD
                     KIEMVGFDMDYTLALYNQARIEELSMRATLHKLVTAKGYPTAIQGLAYDPMLAVRGLV
                     VDRINGNIFKPDRYGFPGRARHGLATIDRSKVGELYQRERMRLSNQRYAWIDSLFALP
                     EAVLYACLVDYFDHHDTPGKPDYPTLWEHIRECIDLAHRDGSIKAIVSVELTDYVERD
                     EGLADTLHKFRSSGKRLFLLTNSAWDYTSTVMSYLLDGVRGGYPSWRNYFDIVVVSAA
                     KPEFFTDEHPFVELDAEGAPVGKAAASDSPLQRGRIYSGGNLKEFQTRAQAHGDRVLF
                     VGDHIYGDMLRSRKSSNWRTAMVLQELEHEITMYDRLRPELARLDRLDAELIHLDSEL
                     YERQAAMRALQKRSAESNGGDGVSEAKRAVKDAIEKLRRDLRETAAQHRSAEDETDDA
                     FNPYWGPLFREGYEVSKFGEQVEAYACVYTSRVSNFRFYSPMQYFRGPRDRMPHER"
     gene            complement(1659..>2240)
                     /locus_tag="VFN38_04040"
     CDS             complement(1659..>2240)
                     /locus_tag="VFN38_04040"
                     /inference="COORDINATES: protein motif:HMM:NF026018.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid II flippase MurJ"
                     /protein_id="HET9010956.1"
                     /translation="PSTVGLALLGVPIIRLIYEHGKFSPHATVETARALSGYAVGLVA
                     YAAIKVVAPAFYALGRTRVPLIASVSAVAANLVWNIFTFRRFGHVGLALGTSIAALVN
                     AAVLVYAFEQQIRGFISRELLLPFLKILIAAGVMAAAVWLVSTRIELLPRHGTVDAAL
                     KAFVPIVVGIGVYFIVARALRLQEATTLLKRFR"
BASE COUNT          395 a          768 c          763 g          314 t
ORIGIN      
        1 cagcggcgcc gcggatccgc aggcgcggcc ggcgcggtcg agggccgcgt gataaaattt
       61 taggcgtgtc cgtcggggcc cctgtgaagt ctggtgagac gccggccccg agcaccagcc
      121 gcgagccgac ggcggcccag ccgctggacg tcccccgccg caaccgcgtc tacgtcaacc
      181 gcaacctgcg gctcgacaag atcgagatgg tcggcttcga catggactac acgcttgcgc
      241 tctacaacca ggcccgcatc gaggagctgt cgatgcgcgc gacgctgcac aagctggtga
      301 ccgcgaaggg ttacccgacg gcgatccagg ggctggccta cgatccgatg ctggcggtgc
      361 gcgggctggt ggtggaccgc atcaacggca acatcttcaa gcccgatcgc tacggcttcc
      421 cggggcgcgc ccgccacggg ctggcgacga tcgaccggtc gaaggtgggc gagctttacc
      481 agcgcgagcg catgcgcctg tcgaatcagc gctacgcctg gatcgattcg ctgttcgctc
      541 tgcccgaggc cgtgctgtac gcctgcctgg tcgattactt cgatcatcac gacacgccgg
      601 gcaagcccga ttacccgacc ctgtgggagc acatccgcga gtgcatcgac ctcgcccacc
      661 gcgacggatc gatcaaggcg atcgtcagcg tggagctgac cgactacgtc gagcgcgacg
      721 agggcctggc ggacacgctg cacaagttcc gctcgtccgg gaagcggctg ttcctgctca
      781 ccaactcggc gtgggactac acctccacgg tgatgagcta cctgctcgac ggcgtgcgcg
      841 gcggctaccc gtcctggcgg aactacttcg acatcgtcgt ggtcagcgcg gcgaagccgg
      901 agttcttcac cgacgagcat ccgttcgtcg agctggacgc agagggcgcg cccgtcggga
      961 aggcggcagc gtcggatagc ccgctgcagc gcgggcgcat ctattcgggc ggcaacctca
     1021 aggagttcca gacgcgggcc caggcgcacg gcgatcgcgt gctgttcgtc ggcgatcaca
     1081 tctacggcga catgctgcgc agccgcaagt cgtcgaactg gcgcacggcg atggtgctgc
     1141 aagagctgga gcacgagatc acgatgtacg accggctgcg gccggagctg gcgcggctgg
     1201 atcgcctcga cgccgagctg atccacctgg actcggagct ttacgagcgc caggcggcga
     1261 tgcgcgcgct gcagaagcgc tcagcagagt cgaacggcgg cgacggcgtc agcgaagcca
     1321 agcgcgcggt gaaggatgcg atcgagaagc tgcgccgcga tctgcgcgag accgccgccc
     1381 agcaccgcag cgccgaggac gagaccgatg acgcgttcaa tccgtactgg ggcccgctgt
     1441 tccgcgaggg ctacgaggtc agcaagttcg gggagcaggt cgaggcctac gcctgcgtct
     1501 ataccagccg cgtctcgaac ttccgcttct actcgcccat gcagtacttc cgcggcccac
     1561 gcgaccgcat gccccacgag cgctagctgg cccgttgatc gcgcgaagcc cgacgccgta
     1621 tccgcgcggc ccgcgcggat cgagagccag ccagcgaatt accggaaccg cttcagcaac
     1681 gtcgtcgctt cctgcaaccg cagtgcgcgc gcgacgatga agtagacgcc gatgccgacc
     1741 acgatcggca cgaacgcctt gagcgcggcg tcgacggtgc cgtgcctggg gagcagctcg
     1801 atccgtgtcg acaccagcca gaccgccgcc gccatcacgc ccgcggcgat caggatcttg
     1861 aggaacggca gcagcagctc gcgcgagatg aacccgcgga tctgctgctc gaacgcgtac
     1921 accagcacgg ccgcgttcac cagcgcggcg atcgacgtcc ccagggccag gccgacgtgc
     1981 ccgaagcgcc ggaacgtgaa gatgttccag accaggttgg cggcgaccgc cgacacgctg
     2041 gcgatcagcg gcacccgcgt ccggccgagg gcgtagaacg cgggcgcgac gaccttgatc
     2101 gccgcgtagg cgaccagacc gaccgcgtag ccggacagcg cgcgcgcggt ctcgaccgtc
     2161 gcgtgcggcg agaacttccc gtgctcgtag atgaggcgga tgatcgggac accgagcagc
     2221 gccaggccga ccgtcgacgg
//
LOCUS       DASSYW010000259         3858 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_962324, whole genome shotgun sequence.
ACCESSION   DASSYW010000259 DASSYW010000000
VERSION     DASSYW010000259.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3858)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3858)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3858
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_962324"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..230)
                     /locus_tag="VFN38_04045"
     CDS             complement(<1..230)
                     /locus_tag="VFN38_04045"
                     /inference="COORDINATES: protein motif:HMM:NF012455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aquaporin"
                     /protein_id="HET9010957.1"
                     /translation="MNDRASRARAVAGEFIGTAFLLAAVVGSGIMGERLAGGNVAIAL
                     LANALATGAALVALIVTFGPVSGAHFNPLVTVV"
     gene            complement(227..1069)
                     /locus_tag="VFN38_04050"
     CDS             complement(227..1069)
                     /locus_tag="VFN38_04050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenite methyltransferase"
                     /protein_id="HET9010958.1"
                     /translation="MSERQQIQDAVQEKYGAIAKARGAVGCCGPAPCGCGDPITSNLY
                     SDEETGLVPDTAVAVSLGCGNPTALAALEPGQTVLDLGSGGGIDVLLSARRVGPTGKV
                     YGLDMTDEMLALARENQQKAGATNVEFLKGSIEAIPLPANSVDVIISNCVINLAADKD
                     AALREAFRVLKPGGRFAVSDVVVHGDVPAEVRRSMELWVGCIAGALSDLEYRDKLTAA
                     GFAEVSVEPWREYSLEDARTFLTAGGLDVDALSSKVDGRIASAFVRARKPAPAPCCGS
                     ECCK"
     gene            1174..1578
                     /locus_tag="VFN38_04055"
     CDS             1174..1578
                     /locus_tag="VFN38_04055"
                     /inference="COORDINATES: protein motif:HMM:NF033788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HET9010959.1"
                     /translation="MDARLETMERLFQALGDATRLRILGLLLTGEVCVCHIHESLQVS
                     QPKASRHLAYLRRAGLVDTRKEGLWVYYRLADAADPVVAAVKQAVTHALGHVPGVKRD
                     AQRLQKKNGCCLPVAAVSSTYACCSDTKEARP"
     gene            1575..2024
                     /gene="arsN2"
                     /locus_tag="VFN38_04060"
     CDS             1575..2024
                     /gene="arsN2"
                     /locus_tag="VFN38_04060"
                     /inference="COORDINATES: protein motif:HMM:NF040501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenic resistance N-acetyltransferase ArsN2"
                     /protein_id="HET9010960.1"
                     /translation="MSDIRIERATHEDAGALLALMERADLPTDGLSDHLDAALVARDG
                     DRVVGSAAIEVYADGGLLRSVAVDADHRGAGLGERLTAAAIEDAERRDLPALYLLTTT
                     AERFFPRFGFERIAREDVPASVQASIEFRGACHASAVVMLKRLDGSR"
     gene            2036..2530
                     /locus_tag="VFN38_04065"
     CDS             2036..2530
                     /locus_tag="VFN38_04065"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024812.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HET9010961.1"
                     /translation="MPGDADRLCEIYNHSVLHEVATFEEEPVSVEEMRQRVEDVQKHF
                     FWLVYEDGGDIVGYAYAGKWKARAAYRHSVELSVYVSPERQGRGIGRRLYAELLRLLG
                     ETDVHSVIGGVAGDNRASFALHLSFGFEQVAHFREVGHKFGQWVDVTYFQLILPPVRT
                     RPRN"
     gene            complement(2508..>3858)
                     /locus_tag="VFN38_04070"
     CDS             complement(2508..>3858)
                     /locus_tag="VFN38_04070"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HET9010962.1"
                     /translation="AMGYRGRWNATEASPERAIESGLIDRFGSIDDTDGGRTYRYSVG
                     GEWQHSSGNVLNKVQAYGLGYGLNLISNFTFYLDDPVRGDQVEQVDRRFVTGVRAFQK
                     RQTRWGGRAVQNTFGVQFRNDDIGQIALYHTEARVRLAARNDASALVTSLGGYAENEV
                     QWAPWLRTTAGLRVDGSRYDVTNRLDDRNSGVATAGILSPKGGAIFGPWRSTEVYANA
                     GTGFHSNSALGTTIRFDGNGDPADPVTPLVRAKGAEVGVRTVAVPHLQSTVSLWTLRL
                     GSELVYNGDIGATEPGPASKRYGVEFANYYSPKPWLIFDGDLSLSRARFVEFNPAGQF
                     VPEAVNTVVSAGASIDNFHKTFGSVRLRYFGPRALIEDDSVRSKATTLINFEGGYQFV
                     KALRANLQIYNLLDARVSDIDYYFASRLQGEPIGGVDDIHVHPAVPRTLRVSFVVGF"
BASE COUNT          613 a         1335 c         1265 g          645 t
ORIGIN      
        1 accaccgtca cgagcgggtt gaagtgggcg cccgacaccg gtccgaacgt gacgatcaac
       61 gccaccagcg ccgcccccgt cgccagtgcg ttcgcgagca gtgcaatggc cacgttgccg
      121 ccggcgagcc gttcgcccat gatgcccgag cccaccacgg cggccagcag gaaagcggtg
      181 ccgatgaatt caccggcaac cgctctggca cgactcgccc tgtcgttcac ttgcagcact
      241 cgctgccgca gcacggcgcc ggcgccggtt tccgcgcgcg gacaaacgcg cttgcaatcc
      301 tgccgtcaac cttcgacgac agcgcatcga cgtcgagtcc accggccgtg aggaacgtcc
      361 gcgcgtcctc gaggctgtac tcccgccacg gttcgacgga cacctcggcg aatcccgcag
      421 ccgtcagctt gtcgcgatac tccaggtcgc tcaacgcgcc ggcgatgcag ccgacccaga
      481 gttccatgct gcgtcgcacc tcggcgggga cgtctccgtg aacgaccacg tcggatacgg
      541 cgaaccggcc accgggcttc agcacgcgga acgcctcgcg cagcgccgcg tccttgtcgg
      601 cggcgaggtt gatcacacag ttggagatga tgacgtccac cgagttcgcc ggtagcggaa
      661 tcgcttcgat cgaccccttc agaaattcca cgttggtggc gccggccttc tgctggttct
      721 cccgggcgag ggccagcatc tcgtcggtca tgtcgagccc gtacaccttg ccggtggggc
      781 cgacgcggcg tgccgacagg agcacgtcga tgccgccacc cgacccgagg tcgagcaccg
      841 tctggccggg ttcgagggcc gcgagcgccg tcggattgcc gcatccgagc gacacggcca
      901 ccgccgtgtc cggcacgagt ccggtttcct cgtccgagta gaggttgctg gtgatggggt
      961 cgccgcaccc gcacggggcg ggtccgcaac atcccaccgc cccccgcgcc ttggcaatcg
     1021 ccccgtactt ctcctgcacc gcgtcctgaa tctgctgccg ttcgctcatg acgtcctcca
     1081 ggcggacctg aatgtccgct ctacgcatcc gcttatatcc gcctaggcgt atacaggcta
     1141 cggcggtcat gctatattcg tcaaggcaaa tatatggacg cccggctcga gaccatggag
     1201 cgcctgtttc aggcgctcgg cgacgcgacc cggttgagga tcctggggct gctgctcacc
     1261 ggcgaggtgt gcgtgtgcca catccacgaa agcctccagg tgtcacaacc caaggcgtcg
     1321 cggcatctgg cctacctgcg ccgcgccggg ctcgtcgaca cgcggaagga agggctgtgg
     1381 gtgtactacc gcctggcgga cgccgccgat ccggtggtgg cggcggtgaa gcaggcggtg
     1441 acccacgcgc tcggccacgt gccgggcgtg aagcgcgacg cgcagcggct gcagaagaag
     1501 aacggctgct gcctgcccgt cgccgccgtc agctccacgt atgcctgctg cagcgatacg
     1561 aaggaagcca gaccgtgagt gacattcgca tcgaacgcgc cacgcacgag gatgccggcg
     1621 ccctgctggc gttgatggag cgcgcggacc tcccgacgga tggcttgagc gaccatctcg
     1681 acgccgcgct cgttgcgcgc gacggagacc gcgtggtcgg gtccgccgcg atcgaggtct
     1741 acgcggacgg cgggctgctg cgctccgtgg ctgtcgatgc cgaccaccgc ggcgctggac
     1801 ttggcgagcg cctgacggct gccgcgatcg aggacgccga gcgccgggac cttccggcgc
     1861 tctatctcct gaccacgacc gcagaacggt tctttccccg gttcggcttc gaacgcatcg
     1921 cgcgcgagga cgtgcccgcg tcggtacagg cctcgatcga gtttcgcggc gcctgccacg
     1981 ccagcgcggt cgtgatgctc aaacgtctcg acggcagccg atgatccgat ccgcggtgcc
     2041 gggcgatgcg gatcgtctgt gcgagatcta caaccactct gtgctccatg aagtcgcgac
     2101 gttcgaggaa gagcccgtct cggtcgagga gatgcggcag cgcgtcgagg acgttcagaa
     2161 gcacttcttc tggctggtgt acgaggacgg tggtgacatc gtgggctacg cgtacgccgg
     2221 gaagtggaag gcacgagcgg cctaccggca ctcggtcgaa ctgagcgtct acgtgagccc
     2281 agagcgtcag ggacgcggca tcggccggcg gctgtatgcc gaactgctgc gcctgcttgg
     2341 ggagacggac gtccacagcg tcatcggtgg agtggcgggc gacaaccggg ccagcttcgc
     2401 gctgcacctg tcgttcggat tcgagcaggt cgcccacttt cgagaagtcg gccacaagtt
     2461 cggccaatgg gtggacgtca cctatttcca gctgatcctg ccgccggtca gaacccgacc
     2521 acgaaactga cgcgcagcgt gcgcgggacg gccggatgga cgtggatgtc gtccacgccg
     2581 ccgatcggct ccccttgcag cctcgacgcg aagtagtagt cgatgtcgct cacccgcgcg
     2641 tcgaggaggt tgtagatctg caggttggcg cgcagtgcct tcacgaactg atagcccccc
     2701 tcgaaattga tcagcgtcgt ggccttcgat cgcaccgagt cgtcctcgat cagcgcgcgc
     2761 gggccgaagt agcgcaaccg cacgctgcca aacgtcttgt ggaagttgtc gatgctggcc
     2821 ccggccgaca ccacggtatt gaccgcttcc ggcacgaact gaccggccgg attgaactcg
     2881 acgaaccggg ctcgtgacag cgacagatcg ccgtcgaaga tcagccacgg cttcgggctg
     2941 tagtagttcg cgaactcgac cccgtatcgc ttgctcgcag gcccgggctc ggtagcgccg
     3001 atgtcgccgt tgtagacgag ctccgagccc agacgcagcg tccatagcga gacggtgctc
     3061 tggaggtgcg ggactgcgac cgtgcgcacg cccacctcgg cgcccttggc gcggaccagc
     3121 ggcgtcacgg gatcggcggg gtcgccgttg ccgtcgaacc tgatcgtcgt gccgagcgca
     3181 ctgttgctgt ggaagccggt gcccgcgttc gcgtacacct cggtcgagcg ccaggggccg
     3241 aagatcgcgc cgcccttggg gctcaggatg ccggctgtcg ccaccccgct gttccggtcg
     3301 tcgaggcgat tcgtcacgtc gtagcgagag ccgtccacgc gcaggcccgc cgtcgtgcgc
     3361 agccacggcg cccactgcac ctcgttttcc gcgtagccgc cgaggctcgt cacgagggcc
     3421 gacgcatcgt tcctggccgc cagccgcacc cgcgcttcgg tgtgatagag cgcgatctgc
     3481 ccgatgtcgt cgttcctgaa ctgcacgccg aacgtgttct gcacggcacg gccgccccag
     3541 cgcgtctgcc gcttctggaa cgcccgcacg ccggtgacga accggcgatc cacctgctcc
     3601 acctggtcgc cgcggaccgg gtcgtcgagg tagaaggtga aattggagat caggttcaac
     3661 ccgtacccga ggccgtacgc ctgcaccttg ttcagcacgt ttccgctgct gtgctgccac
     3721 tcgccgccga cactgtagcg atacgtgcgc ccgccgtccg tatcgtcgat cgatccgaac
     3781 cggtcgatca gccctgactc gatggctcgc tcaggcgacg cttccgtggc gttccacctg
     3841 ccgcgatagc ccatcgcg
//
LOCUS       DASSYW010000260         5412 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_78032, whole genome shotgun sequence.
ACCESSION   DASSYW010000260 DASSYW010000000
VERSION     DASSYW010000260.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 5412)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5412)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5412
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_78032"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(149..1264)
                     /gene="rsgA"
                     /locus_tag="VFN38_04075"
     CDS             complement(149..1264)
                     /gene="rsgA"
                     /locus_tag="VFN38_04075"
                     /inference="COORDINATES: protein motif:HMM:TIGR00157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome small subunit-dependent GTPase A"
                     /protein_id="HET9010963.1"
                     /translation="MRRIVSRSPAYTLRVRLEDLGWDEQVAAAYEPWASRADHVPARV
                     AVEFNHMYRVYVDGAEADAVVSGRLKHHAESRGELPAVGDWVVMRKRPDEDRGSIVHV
                     LPRRSRFSRKASGHVTDEQVVAANVDVVFLVMSLDHDFSPRRLERYLLLARESGAAPV
                     LLLTKPDLSDDVPGRITDVAVVAGDVPVHVLNPRSGEGAEALRGYVAAGRTCALLGSS
                     GVGKSTIVNRLVGADVRKTRAVREADSKGRHTTTHRELVPVPGGGLLLDTPGMRELQL
                     WSAGEGVEQTFDDVERHAAGCRFSDCRHRDEPRCAVKAAVAEGVLSSERLESYLKLQD
                     ELAHLARQQDQRAQIEEKRRGRIGAKALRQSLRAKGR"
     gene            1263..1976
                     /locus_tag="VFN38_04080"
     CDS             1263..1976
                     /locus_tag="VFN38_04080"
                     /inference="COORDINATES: protein motif:HMM:NF019032.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1499 domain-containing protein"
                     /protein_id="HET9010964.1"
                     /translation="MGLSIAAWAVAVIGLAVLGAAGPAYRLGASLRIAFSIVQWGAMI
                     ALGGAALSSGALWWSRRKGRTGAAVFAGVGVLIGVLTAGVGYGWLRQAQGAPPVHDVT
                     TDLENPPTFEALAADRPTASNTLTRSREADELQRQHYPDLAPVIVTQPARLVFDRVRL
                     VADNQGWTIVASDADNGRLEATDTTRWFGFTDDIVVRLTPWGTGTRVDVRSASRYGTT
                     DTGTNARRIRRFLSALQAR"
     gene            1979..2629
                     /locus_tag="VFN38_04085"
     CDS             1979..2629
                     /locus_tag="VFN38_04085"
                     /inference="COORDINATES: protein motif:HMM:NF042734.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta family hydrolase"
                     /protein_id="HET9010965.1"
                     /translation="MTEPTVYRAAAPSGRLLVLAHGAGAGQQHPFMTAMASLLAARGI
                     DVVTFDFDYMRERRKVPDKAPVLEACFGRVVDWATAQPEFAGHRLFIGGKSMGGRMAT
                     HLAAAGFVARGGAGPSLAGVVALGYPLHPPGKPLQPRTAHLPAIRTPLLIVQGSRDTF
                     GTPDELRPVVASMTAPVTLHVVAGGDHSFTVSRSSKDAVLSSVADVIAAWTVSSNL"
     gene            2810..3799
                     /gene="glsA"
                     /locus_tag="VFN38_04090"
     CDS             2810..3799
                     /gene="glsA"
                     /locus_tag="VFN38_04090"
                     /EC_number="3.5.1.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR03814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004359 - glutaminase activity [Evidence
                     IEA];
                     GO_process: GO:0006541 - glutamine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutaminase A"
                     /protein_id="HET9010966.1"
                     /translation="MTDVAAPPHELQSLINSLHSKYALNITGQVATYIPELGKADPEH
                     FGVSLVATDGRMFEAGDCQQPFTIQSISKPFAFGLAVEELGADNVLQRVSVEPSGDAF
                     NSIELQNGSNRPFNPMINTGAITVSALLHSRHGSKTFDHLLERFSTIAGRQLEVDEAV
                     YESERRTGHRNRAIAHLLLNFGVVHEDIDAALDVYFRQCSILVTARDLALMGATLSNM
                     GRNPMTNDSAFSVRHVKDILSIMFTCGMYDYSGQWAYRVGIPAKSGVAGGVLAVINRQ
                     LGIGTYSPRLDPYGNSVRGIEVCVDLASRLGLHVFDCLNMGSSFLDAVLNPAP"
     gene            complement(3821..4576)
                     /locus_tag="VFN38_04095"
     CDS             complement(3821..4576)
                     /locus_tag="VFN38_04095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HET9010967.1"
                     /translation="MTWEAAFGWASSVDGWVALFTLSVLEIVLGIDNVVFVSILAGKL
                     PAGQRERARKLGMFLAMFIRILLLLSITWVMGLTAPLFGLLGHDVTGRDLILIIGGLF
                     LIAKSTHEIHLKLEGDEHETSGRRAATFAGVITQILLLDIVFSLDSVITAVGMAEHVA
                     VMIIAVVLAVAVMMMAARVVSDFVERHPTVKMLALSFLLLIGMSLIGEGWGQHIPKGY
                     IYFAMGFSVFVEAINLRIRGKQAPVHLRHQAPH"
     gene            complement(4573..5076)
                     /locus_tag="VFN38_04100"
     CDS             complement(4573..5076)
                     /locus_tag="VFN38_04100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010968.1"
                     /translation="MTDAPAFTRPSQLWKALPPERKLQAAEAFWSDQEGGLEQAEAVA
                     LIAQKIKFRAKSVIAMPADKRARHLASFPNVSEIVAARLLVAYHLAHQRPMMGAFLDA
                     VGIAHEQGMIADEELKAPEPATLRKAATTIAGTYPKEDVSLYLNTLLWQDPETWGALG
                     EAPERTA"
     gene            5104..>5412
                     /locus_tag="VFN38_04105"
     CDS             5104..>5412
                     /locus_tag="VFN38_04105"
                     /inference="COORDINATES: protein motif:HMM:NF012339.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HET9010969.1"
                     /translation="MPTLMVEGHAPVVVDDGMRLVNAIEQRAGVDILHACGGNARCTT
                     CRVEFVDGEPPRMTQAEQTKLAEKGLSGVRLSCQIACDHDMSVRVINHLAGSGRPDPG
                     K"
BASE COUNT          841 a         1934 c         1808 g          829 t
ORIGIN      
        1 cgcgctgcgc ctggcggccg cgcagccggt ggccctgccg ccgctgccgg acgcaccacc
       61 gcccgtggca cgcgcggcgg cgattcagcc gcggccgctc cccgacgtga gggactaccc
      121 gccggatccg cccgaacgcc cggtcgtact accgaccttt ggcccgcagt gactgcctga
      181 gcgccttggc gccgatgcgg ccgcggcgct tctcctcgat ctgcgcccgc tgatcctgct
      241 gccgcgccag gtgcgcgagc tcgtcctgca gtttcaaata gctctccaag cgttccgagg
      301 acagcacgcc ctcggccacc gccgccttca ccgcgcagcg cggctcgtca cggtggcggc
      361 aatcgctgaa gcggcagccg gcggcatgcc gctcgacgtc gtcgaacgtc tgctccacgc
      421 cctcgcctgc cgaccagagc tgcagctcgc gcatgcccgg cgtatcgagg agcaggccgc
      481 cgccaggcac cggcacgagc tcgcggtgcg tcgtcgtgtg gcgccctttc gaatcggcct
      541 cgcgcaccgc gcgcgtcttg cgcacgtcgg cccccacgag gcggttgacg atggtgctct
      601 tgccgacacc ggacgacccg agcagcgcgc acgtgcggcc cgccgccacg tagccgcgca
      661 gggcctcggc cccttcgccg ctgcgtgggt tgaggacgtg caccggaacg tcgcccgcca
      721 ccaccgcgac gtccgtgatg cgtcccggca cgtcgtcgct cagatccggc ttcgtcaaca
      781 gcaggaccgg cgcggccccg ctctcgcggg ccagaagcag gtagcgttcg aggcgtcgcg
      841 ggctgaagtc gtgatcgagc gacatcacca ggaagaccac gtccacgttg gccgcgacga
      901 cctgctcgtc ggtgacgtgg ccggaggcct tgcgtgaaaa gcggctgcgc cgtggcagca
      961 cgtggacgat ggagccgcgg tcctcgtccg gacgcttccg catcactacc cagtcgccca
     1021 ccgcggggag ctcgccgcga ctttcggcgt ggtgcttcaa gcgtcccgag acgacggcgt
     1081 ccgcttccgc gccgtccacg tagacgcggt acatgtggtt gaactccacc gccacccgcg
     1141 ccggcacgtg gtccgcgcgc gacgcccacg gctcgtacgc cgccgccacc tgctcgtccc
     1201 accccaggtc ctcgagccgc acgcgaagag tgtacgccgg gctccggctt acaattcggc
     1261 gcatggggct gtcgatcgcc gcgtgggccg ttgccgtcat cgggctcgcc gtgctcggcg
     1321 ccgccggccc cgcctaccgc ctcggggcgt cgctcagaat cgccttttct atcgtgcagt
     1381 ggggggcgat gatcgcgctg ggaggcgcgg ccctctcgtc aggagccttg tggtggtcgc
     1441 ggcgcaaggg ccgcaccggc gcggccgtct tcgcgggggt cggcgtcctg atcggcgtgc
     1501 tgaccgccgg ggtcggctac ggctggctgc gacaggcgca gggcgcgccg ccggtgcacg
     1561 acgtgacgac cgatctggag aacccgccca ccttcgaagc gctcgccgcc gaccggccga
     1621 ccgccagcaa caccctcacc cgctcgcggg aggccgacga actgcagcgg cagcactatc
     1681 ccgatctggc gccggtcatc gtgacgcaac ccgcacggct cgtgttcgac cgcgtgcggc
     1741 tcgtggccga caaccagggg tggacgatcg tggcgagcga cgccgacaac ggccgcctcg
     1801 aagccaccga caccacgcgc tggttcggat tcaccgacga catcgtcgta cgcctcacgc
     1861 cgtggggcac cggcacgcgc gtggacgtgc gatcggcatc gcgttacggc acgaccgaca
     1921 ccggcacgaa cgcgcggcgc atccgccgct ttctgtccgc tctccaggca cggtagtcat
     1981 gaccgagccc accgtttatc gcgcggccgc accgtccggc cgcctgctgg tgctggcgca
     2041 cggcgccggc gccggccagc agcatccgtt catgacggcc atggcgtcgc tgctcgccgc
     2101 ccgcggcatc gacgtcgtca ccttcgactt cgactacatg cgcgagcgcc gcaaggtgcc
     2161 cgacaaggcg cccgtgctcg aagcgtgctt cggccgtgtg gtggactggg cgacagcgca
     2221 gccggagttc gcggggcacc ggctgttcat cggcggtaag tcgatgggcg gccgcatggc
     2281 cacgcacctg gcggcggccg ggttcgtggc gcgcggcggc gccggtccga gcctggcggg
     2341 cgtcgtggcg ctcggctacc cgctgcaccc gccgggcaag ccgctgcagc cgcgaacggc
     2401 gcacctgccc gccattcgaa cgccgctcct gatcgtccag ggcagccgcg acaccttcgg
     2461 cacgccggac gaactgcggc cggtcgtcgc gagcatgacg gccccggtga cgctgcacgt
     2521 ggtcgccggc ggagaccact cgttcaccgt gtcacgttcc tcgaaggacg ccgtgctgtc
     2581 gtcggtggcc gacgtcatcg ccgcgtggac ggtttcttcg aatctgtagg cgattctgaa
     2641 gcggccgaca atcttgtcca aatcgagctc cggcaacgtc cctgcccgaa cggacccaag
     2701 tccctgtcag acaaacagat cgtcgaagac cgcccgattg caggaatggg aacgccgctt
     2761 gctgaaacct catctactgg cccgcccttc gggcgggcgg taggagaaca tgaccgacgt
     2821 cgctgccccg ccgcacgagc tccagagcct gatcaacagc ctgcacagca agtacgcgtt
     2881 gaacatcacc gggcaggtgg ccacctacat tccagagctc gggaaggccg acccggaaca
     2941 cttcggcgtc agcctcgtcg ccaccgacgg gcggatgttc gaggccggcg actgccagca
     3001 gccgttcacc atccagtcga tctcgaagcc cttcgccttc gggttggcgg tcgaggagct
     3061 gggcgccgac aacgtgctgc agcgcgtcag cgtggaaccg agcggcgacg ccttcaattc
     3121 catcgagctc cagaacggct cgaaccggcc gttcaacccg atgatcaaca ccggcgcaat
     3181 taccgtgagc gcgctcctcc actcgaggca cgggtcgaag accttcgacc atctcctcga
     3241 gcgcttcagc accatcgccg gacgccagct ggaggtggac gaagccgtct acgagtccga
     3301 gcgccgcacc ggccatcgca accgggcgat cgcccacctg ctcctgaact tcggcgtggt
     3361 ccacgaggac atcgacgcgg ccctggacgt ctacttccgg cagtgctcca ttctggtgac
     3421 ggcgcgggac ctggcgctca tgggcgccac gctctccaac atggggcgca acccgatgac
     3481 caacgacagc gccttctcgg tgcggcacgt caaggacatc ctgtcgatca tgttcacgtg
     3541 cgggatgtac gactactcgg ggcagtgggc gtaccgggtg ggcatccccg ccaagagcgg
     3601 tgtggccggc ggcgtgctgg ccgtcatcaa ccgccagctg ggcatcggca cctactcgcc
     3661 gcggctcgac ccgtacggca acagcgtgcg cggcatcgag gtgtgcgtgg acctggcgtc
     3721 gcgcctgggc ctgcacgtct tcgactgcct gaacatgggc tcgagcttcc tcgacgccgt
     3781 cctgaaccct gccccgtagc cgccggtctt cagaccggcc tcagtgcggt gcctgatgcc
     3841 tcagatgcac cggcgcctgc ttgccgcgga tacgcaggtt gatcgcctcg acgaacaccg
     3901 agaagcccat cgcgaagtag atgtagccct tcgggatgtg ctggccccag ccctcgccga
     3961 tcagcgacat gccgatcagc agcaggaagc tgagcgcgag catcttcacc gtggggtggc
     4021 gctcgacgaa gtcgctcacc acacgggccg ccatcatcat caccgccacg gccaggacga
     4081 cggcgatgat catcaccgcc acgtgctcgg ccatgccgac ggcggtaatc accgagtcga
     4141 gcgagaagac gatgtcgagc agcaggatct gggtgatgac gccggcaaac gtggcggcgc
     4201 gccgccccga cgtctcgtgc tcgtcgcctt cgagcttcag gtggatttcg tgcgtgctct
     4261 tggcgatcag gaacaggccg ccgatgatga gaatcagatc gcgtcccgtg acgtcgtgcc
     4321 cgaggagccc gaagagcggc gccgtgaggc ccatcaccca ggtgatcgac agcaacagca
     4381 gaatccggat gaacatcgcc aggaacatgc ccagcttgcg ggcgcgttcg cgctgacccg
     4441 ccggcagctt gccggcgaga atcgacacga agacgacgtt gtcgatgccg aggacgatct
     4501 cgagcacgct gagggtgaag agcgcgaccc agccgtcgac gctcgacgcc cagccgaagg
     4561 ccgcctccca ggtcacgccg tgcgctccgg cgcctcgccc agcgcgcccc aggtctccgg
     4621 gtcctgccac aggagggtgt tgagatagag cgacacgtcc tccttcgggt acgtacccgc
     4681 gatggtcgtc gccgccttgc gcagcgtcgc gggctcgggt gccttcagct cctcgtcggc
     4741 aatcatcccc tgttcgtggg cgatgccgac cgcgtcgagg aacgcgccca tcatcggccg
     4801 ctggtgcgcc aggtggtagg cgacgagcag ccgcgcggcc acgatctcgg agacgttcgg
     4861 gaacgacgcg aggtgccgtg cgcgcttgtc ggcgggcatg gcgatgacgc tcttcgcgcg
     4921 gaacttgatc ttctgcgcaa tgagcgccac ggcctcggcc tgctcgagtc cgccttcctg
     4981 atcgctccag aaggcttcgg ctgcctgcag cttgcgttcg ggcggcagcg ccttccacaa
     5041 ctgcgacgga cgggtgaatg cgggcgcgtc tgtcatgagt gtcgatacgt taacatagcg
     5101 tccatgccga ctttgatggt ggaagggcat gcgccggtcg tggtggacga cggcatgcgg
     5161 ctcgtcaatg caatcgaaca gcgcgccggc gtggacatcc tgcacgcgtg cggcggcaac
     5221 gcgcgctgca ccacgtgccg cgtggagttc gtggacggcg agccgccccg catgacgcag
     5281 gcggaacaga cgaaactggc ggaaaagggg ctgtcagggg tgcggctgtc gtgtcagatc
     5341 gcgtgcgatc acgacatgtc cgtgcgggtg atcaatcacc tcgcgggcag cggccggccg
     5401 gatccgggca ag
//
LOCUS       DASSYW010000261         3007 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_925368, whole genome shotgun sequence.
ACCESSION   DASSYW010000261 DASSYW010000000
VERSION     DASSYW010000261.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3007)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3007)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3007
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_925368"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2457)
                     /locus_tag="VFN38_04110"
     CDS             complement(<1..2457)
                     /locus_tag="VFN38_04110"
                     /inference="COORDINATES: protein motif:HMM:TIGR04056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0071702 - organic substance transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SusC/RagA family TonB-linked outer membrane
                     protein"
                     /protein_id="HET9010970.1"
                     /translation="MSRGHFRLIAGAIALAFAAPAWAQSTGTLSGHVIDRQTQRPIGS
                     VQVRIVGTTRGTQTDESGAYRIVNVPAGATQMVAQRIGYTQQSRAVTVEANSITTVDF
                     AMVQAVTTLDQVIVTATGREQTTREIGSSVGALNTADVQMAPITSASELLQGKISGVV
                     VTPSSGTTGGGSRVRIRGNNSMSLSNAPLIIIDGARVENSESSLGFGVGGQAPSRLND
                     LNPEDIETIEILKGPAAAALYGTAAANGVVQVTTKKGAAGRPEFRVWTESGSLKQQAE
                     FPSNVYATGNLVVRNAAGAVVPASTPVGRCDIIRQAIGANPVGTQVGCTAVTNTYTRN
                     PLEDALTTPFRGGNRQSLGGSVSGGSDVATFYLSSDYDKEQGITPMNGLQRLKLQANS
                     TGRVGDKLSVGANISYLDNRMDLPNGDNALFGIVPMGLFGSANPSTPAINQGFQNDPA
                     FFYGWLTSQKYARTNGGLRGEYRPLAWLSFNGNVGLDRYAREDRNRVPRVSAYGPAFG
                     SVYTNGFIQSYTYDIYDLTTNGSGTAVFDLRPDLVSTTSAGTQFIRENLHRIYAFGAG
                     LTPGIETSLAGATSDFSAGELNTLNSTLSAYLQQQFAWRDRVFLNTAVRGDKNTAFGQ
                     NIGWIFYPSVSGSWVLSDESFFPRVGFLNSLRLRAAYGQAGLRPGPTDALQAFGSQVT
                     TLLSSAGDAQDAAAITFNNIGNPALKPERSSEVEVGFESELFTSRLGLELSYFNKTSK
                     DALVQKPLPPSAGSAANRFENLGEVNNSGLEYRVHGQALRTSDIEWNASVNGSFIKNK
                     LVSLGVDAQGKPIPDVTVSSY"
BASE COUNT          434 a          975 c         1092 g          506 t
ORIGIN      
        1 gtacgagctc acggtcacgt cggggatcgg cttgccctgc gcgtccacgc ccaggctgac
       61 gagcttgttc ttgatgaacg agccgttgac gctggcgttc cactcgatgt ccgacgtgcg
      121 cagcgcctgg ccgtgcacgc gatactcgag accgctgttg ttgacctcac cgaggttctc
      181 gaagcggttc gcggcggaac cggccgaggg cggcagcggc ttctgcacca gcgcgtcctt
      241 cgaggtcttg ttgaagtagc tgagctccag gccaagccgg ctcgtgaaca gctcgctctc
      301 gaacccgacc tccacctcgg acgaccgctc cggcttgagc gccgggttgc cgatgttgtt
      361 gaaggtgatg gccgcggcat cctgggcatc gccggcgctg ctgagcagcg tggtgacctg
      421 gctgccgaac gcctggagcg cgtcggtggg ccccgggcgc agcccggcct ggccgtacgc
      481 ggcgcggagg cggaggctgt tcaggaagcc gacccgcggg aagaacgact cgtcggacag
      541 cacccacgag ccgctcaccg acgggtagaa gatccagccg atgttctggc cgaacgcggt
      601 gttcttgtcg ccgcggaccg cggtgttgag gaacacccgg tcgcgccacg cgaactgctg
      661 ctgcaggtac gccgacagcg tggagttcag ggtgttgagc tccccggccg agaagtccga
      721 cgtcgcaccg gccagcgagg tctcgatgcc gggcgtgaga ccggcgccga aggcgtagat
      781 gcggtgcagg ttctcacgga tgaactgcgt gccggccgag gtcgtggaca cgaggtcggg
      841 gcgcaggtcg aacacggcgg tgccgctgcc gttggtcgtg aggtcgtaga tgtcgtaggt
      901 gtagctctgg atgaagccgt tcgtgtacac ggagccgaac gccgggccgt aggcgctgac
      961 gcgcggcacc cggttgcggt cttcgcgggc gtagcgatcg aggcccacgt tgccgttgaa
     1021 gctcagccac gcgaggggcc ggtactcgcc ccgcaggccg ccgttcgtgc gagcgtactt
     1081 ctggctcgtg agccagccgt agaagaaggc cgggtcgttc tggaagccct ggttgatggc
     1141 cggcgtcgac gggttggcgc tgccgaacag tcccatcggc acgatgccga acagcgcgtt
     1201 gtcgccgttg ggcaggtcca tccggttgtc caggtacgag atgttcgcgc ccacggacag
     1261 cttgtcgccc acgcggccgg tggagttggc ctggagcttc aggcgctgca gcccgttcat
     1321 cggcgtgatg ccctgctcct tgtcgtagtc cgacgacagg tagaaggtcg cgacgtcgct
     1381 gccgccggac acgctgccgc cgaggctctg gcggttgccg ccgcggaacg gggtggtgag
     1441 cgcgtcctcg agcgggttgc gcgtgtaggt gttggtcacc gccgtgcagc ccacctgggt
     1501 gcccaccggg ttggcgccga tcgcctggcg gatgatgtcg cagcggccca ccggcgtgga
     1561 ggccgggacg accgcgcccg cggcgttgcg cacgacgagg ttgccggtcg catagacgtt
     1621 gctcgggaac tcggcctgct gcttcaggct gcccgactcc gtccagacgc ggaactcggg
     1681 gcggccggcg gcgcccttct tcgtcgtcac ctggacgacg ccgttggcgg cggcggtgcc
     1741 gtagagcgcg gcggccgcgg ggcccttgag gatctcgatc gtctcgatgt cttccgggtt
     1801 gaggtcgttc aggcgcgacg gcgcctggcc gcccacgccg aagccgagcg acgactcgga
     1861 gttctccacg cgcgccccgt cgatgatgat gaggggggcg ttggagagcg acatgctgtt
     1921 gttgccgcgg atgcggacgc gcgacccgcc gcccgtcgtg ccgctgctcg gcgtcacgac
     1981 gacgccggag atcttaccct ggagcagctc cgacgcgctc gtgatcggcg ccatctggac
     2041 gtcggcggtg ttcagcgcgc ccaccgagct cccgatctcg cgcgtggtct gctcgcggcc
     2101 cgtcgcggtg acgatcacct ggtcgagcgt ggtgacggcc tgcaccatcg cgaaatcgac
     2161 cgtcgtgatg ctgttcgcct cgacggtcac ggcgcgcgac tgctgggtgt agccgatccg
     2221 ctgcgccacc atctgcgtcg cgccggccgg cacgttcacg atgcggtacg cgcccgattc
     2281 gtccgtctgg gtgccacgcg tggtcccgac gatgcgcacc tggacactgc cgatgggccg
     2341 ctgggtctga cggtcgatga cgtgaccgga cagggtcccc gtgctctgcg cccacgcggg
     2401 cgcggcgaac gccagtgcaa tcgcaccagc gataagcctg aaatgacctc tactcattgc
     2461 ttactcctcc gacgtcggag ctagggaaga cgaaccagcg ggaccgaggg tggcgacggg
     2521 gctccatgga gctggagctg ggcttcgccg acgggcgatc cggcgagtcg atgtttggat
     2581 tgctccagca cgctggagcg gggcttcgcc gatgtggctc cagcgagtcg atccggttgg
     2641 ctccaggggg actggagcgg ggcttcgccg acgacactgc ggcgagtgca ttcgaacccg
     2701 cggtacgtcg aatcgacggc gggcgtgtcg taatgaccct ggacggcgcg atcaggtcac
     2761 ctgccaggac gaatatatct cactactgta acgtcgagct acctgccttg agcggatgtt
     2821 cggccggcgg gcatcacccg cgcgccgcgc cgcgccgccg ggggtcacgc ccctgggaga
     2881 cgggcgacct ccaatatcga caggtgcacc ccgaatatgg agtcggggaa tccccgagcg
     2941 gcggctctcc cctccccgtc aggcagacgg tcgagagatc gctgcgagag gggcccggag
     3001 cgcgatg
//
LOCUS       DASSYW010000262         3406 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_962238, whole genome shotgun sequence.
ACCESSION   DASSYW010000262 DASSYW010000000
VERSION     DASSYW010000262.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3406)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3406)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3406
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_962238"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..874)
                     /locus_tag="VFN38_04115"
     CDS             complement(<1..874)
                     /locus_tag="VFN38_04115"
                     /inference="COORDINATES: protein motif:HMM:NF019924.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen/starch synthase"
                     /protein_id="HET9010971.1"
                     /translation="MARSSPRDGAQPAVERPAPTRRPSRTRRTDAQATATPGAPIAPL
                     VRPDGSPAPVVHLVPELSPYARTGGLGEAVSSLAKYQAASGIPVTVFMPLYGVIRERT
                     ELQPVGPAFAVGVGARTETARIHEPVVPAGPGSPRVLFVESEEYFDRPGLYGDDTGDY
                     PDNARRYALFARAVLVALPRLLPEAPSIMHAHDWQTALTSVYLKNEFMSHPYYEGIRA
                     VLSVHNAGYQGHFPESVLQEIGLPAGLYNSRQLEWYGRVNLLKGGLVFSDLVITVSPT
                     HAHELRTEKGGFGLD"
     gene            1263..2900
                     /locus_tag="VFN38_04120"
     CDS             1263..2900
                     /locus_tag="VFN38_04120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TldD/PmbA family protein"
                     /protein_id="HET9010972.1"
                     /translation="MSPSRREFITTVTSAAALAATGGTIVPAAAATAETGRRRAAEPP
                     AMDPAVRELLLEALDAATRGGAEFADARHSRYRNSAVTTRERQIVNVSEGDAMGVGVR
                     VLVNGTWGFGATRELTKTGVAAAAREAVAIARANRLPDAERVRLAPAPVVPDGRWQTP
                     YTIDPFAVPVEEKADLLLRANAAALAAPNVRFVSSSMLFVKEEKSYANTEGTFTRQTA
                     VRSWMPFTATAVSPDRTDFQSRGEVMAPMGRGYEYLLEQKPEENGRLWGEQAAEKLKA
                     KPVAVGRHDLVLHPSHLFLTIHESVAHPTELDRALGYEANYAGTSFAAPPRQALGTLK
                     FGSPLMHVVGDRDQPGSLAAIGWDDEGVQPERFDIIRDGVLVDYQTTREQAPMLDWWY
                     ARQGKPVRSHGCSYAQRSSDVQFQRMPNVSLMPGAKDLGWDDLIAATDRGIAILGRGS
                     YSIDQQRYNAQFGGQLYYEIRGGRIVGMLKDVAYQMRTPDFWGALDLLGGPGSWEMGG
                     TFNDGKGQPGQSNAVSHGCPPSRFRNINVVNTGTVGR"
     gene            3050..>3406
                     /locus_tag="VFN38_04125"
     CDS             3050..>3406
                     /locus_tag="VFN38_04125"
                     /inference="COORDINATES: protein motif:HMM:NF013673.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase modulator"
                     /protein_id="HET9010973.1"
                     /translation="MTTRRDFLKTSAAVGAVALATPALSRAETLAARAARPAPPAMDP
                     ATKELLTEALNAAKMGGAEFADARIGRYRNNFVITREQQIVNVVDTDTLGVGVRVLLN
                     GTWGFGASRDLTKAGVV"
BASE COUNT          520 a         1226 c         1196 g          464 t
ORIGIN      
        1 cgtccagccc gaaccccccc ttttccgtgc gcagctcgtg cgcgtgggtg gggctcaccg
       61 tgatgaccag gtcggagaag acgaggcctc ccttcagcag gttcacccgc ccgtaccact
      121 cgagctgccg gctgttgtac agccccgccg gcagcccgat ctcctgcagc acggactcgg
      181 gaaagtgccc ctgataaccc gcgttgtgca ccgagagcac cgcgcggatc ccctcgtagt
      241 acgggtgcga catgaactcg ttcttcaggt acacgctcgt gagcgccgtc tgccagtcgt
      301 gggcgtgcat gatgctcggc gcctccggca gcagtcgcgg caacgcgacg agcacggcgc
      361 gcgcgaacag ggcatagcgc cgcgcgttgt ccggatagtc gccggtgtcg tcgccgtaga
      421 ggcccggccg gtcgaaatac tcctcgctct ccacgaagag cacgcgcgga gaaccggggc
      481 ccgccgggac gaccggttcg tggatgcgcg ccgtctcggt gcgcgccccc acccccaccg
      541 cgaacgccgg ccccacgggc tggagctccg tccgctcgcg gatcacgccg tagaggggca
      601 tgaacaccgt gaccgggatc cctgaagcgg cctggtactt ggccaggctc gacaccgcct
      661 cgccgaggcc gccggtgcgc gcgtacgggg agagctccgg cacgagatgc acgacgggag
      721 ccggggagcc gtccggccgg acgagcggcg cgatgggtgc gcccggcgtc gccgtggcct
      781 gcgcgtcggt ccgccgggtg cggctcgggc ggcgggtcgg ggcgggacgc tcgaccgccg
      841 gttgggcgcc gtcacgaggt gagcttcgcg ccatcgtcgc gccagcaggg gggagctgct
      901 cgcccgacgt cgcggcgccg gaggttggag tagtcgaacc gatgtccata gaaggcgtgc
      961 gcagtcgagg catgatgcag tcacaagcgc aaaaatccgc ccagtacgcg gcggcctcga
     1021 tcgccgcgtc atgtcgcacc gtagcacgaa ggaatcgccg atgcagcggt ggggttccgg
     1081 atcgtccccg ccccgccact cacaatacgt cgggcgcgcc catcccgctt cgccggttgc
     1141 gcggggattc ccccgcctcc aacatgtcgg gacgccttgc cgctggtgat gcgctccggt
     1201 ccggactcca tcgcccgggc cggtacccgg acccttcgct ctccgtcgcc acaccgcccc
     1261 gaatgagccc gagccgccgc gagttcatca cgaccgtcac ctccgccgcg gcgctggcgg
     1321 caacgggggg aacgatcgtg cctgccgccg cggcgaccgc cgagaccggc cgccgccgcg
     1381 cggcggagcc gccggcgatg gaccccgccg tccgcgagct gctgctcgag gcgctggatg
     1441 ccgcgacgcg cggcggcgcg gagttcgccg atgcgcgcca ctcgcgctac cgcaacagcg
     1501 ccgtcacgac gcgcgagcgg cagatcgtga acgtgtccga gggggacgcg atgggcgtcg
     1561 gggtgcgggt gctcgtgaac gggacgtggg gattcggcgc gacgcgggag ctcacgaaga
     1621 cgggggtcgc cgcggcggcg cgcgaagcgg tcgcgatcgc ccgggcgaac cggcttcccg
     1681 acgcggagcg cgtccggctc gcgccggccc ccgtcgtccc cgacggccgc tggcagacgc
     1741 cctacacgat cgatccgttc gccgtgccgg tggaggagaa ggcggatctg ctcctccgcg
     1801 ccaacgcggc cgcgctcgcg gcgccgaacg tccggttcgt gagcagctcg atgctgttcg
     1861 tgaaggagga gaagagctac gcgaacacgg agggcacctt cacccgccag accgcggtgc
     1921 gaagctggat gcccttcacc gcgaccgcgg tgtcgccgga ccgcaccgac ttccagtcgc
     1981 gcggcgaggt gatggccccg atggggcgcg gctacgagta tctcctggag cagaagcccg
     2041 aggagaacgg gcggctctgg ggcgagcagg cggcggagaa gctgaaggcg aagccggtgg
     2101 cggtcggccg ccacgacctc gtgctccatc ccagccacct ctttctcacc atccacgaat
     2161 ccgtcgccca tcccacggag ctcgaccgcg cgctgggcta cgaggccaac tacgcgggca
     2221 ccagcttcgc cgcaccgccg cgccaggcac tcggcacgct gaagttcggg tcgccattga
     2281 tgcacgtcgt cggcgaccgc gaccaacccg ggtcgctcgc cgccatcggc tgggacgacg
     2341 aaggggtgca gcccgagcgg ttcgacatca ttcgcgacgg ggtgctcgtg gactaccaga
     2401 ccacgcgcga gcaggcgccg atgctcgact ggtggtacgc gcgccagggg aagccggtgc
     2461 ggtcacacgg ctgctcgtac gcgcagcgct cgtccgacgt gcagttccag cgcatgccga
     2521 acgtatcgct gatgccgggc gcgaaggacc tcgggtggga cgacctgatc gcggcgaccg
     2581 accgcggcat cgcgatcctc ggtcgcgggt cgtactccat cgaccagcag cggtacaacg
     2641 cacagttcgg cgggcagctc tactacgaga tcaggggcgg caggatcgtc ggcatgctga
     2701 aggatgtcgc ctaccagatg cgcacccccg acttctgggg cgccctcgac ctgctgggcg
     2761 ggccggggag ctgggagatg gggggcacct tcaacgacgg caagggccag ccgggccagt
     2821 ccaacgccgt gagccacggc tgcccgccgt cgagattccg gaacatcaac gtcgtgaata
     2881 ctggaacggt tgggcggtga gccggttaag cggttaggcg gtgacgccaa accgctcgac
     2941 ggcgccaccg ctccaccgct ccaccgctcg accgctcgac cgctcgaccg ctcgacctcg
     3001 accgttcacc gttcaccgtt caccgttcac gtccacccgc tcctctccca tgaccaccag
     3061 gcgagacttc ctcaagacca gcgcggccgt gggcgctgtc gcgttggcga cacccgctct
     3121 ttcgagggcc gagacgctcg cggcccgcgc cgcgcgcccg gcaccgccgg ccatggatcc
     3181 ggccacgaag gagctgctca ccgaggcgct caacgccgcg aagatggggg gcgccgagtt
     3241 cgccgacgcc cgcatcgggc gctatcggaa caacttcgtc atcacgcgcg agcagcagat
     3301 cgtcaacgtc gtggacaccg acactctcgg tgtcggcgtg cgcgtgctcc tgaacggcac
     3361 gtggggcttc ggcgcttcgc gcgacctcac gaaggccggc gtcgtc
//
LOCUS       DASSYW010000263         3026 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1128177, whole genome shotgun sequence.
ACCESSION   DASSYW010000263 DASSYW010000000
VERSION     DASSYW010000263.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3026)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3026)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3026
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1128177"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..560
                     /locus_tag="VFN38_04130"
     CDS             <1..560
                     /locus_tag="VFN38_04130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010974.1"
                     /translation="RAATAPKLTPEYLAKWQAISKARVAGDSSSDNTLKCLPPGMPAM
                     MNMAYGMEVMQTKDKITFFSELNDALRRVYLDGRKPTQIVLDDPTYAGFSTGHWEGDT
                     LVVETVALKDTSYIEGFTPHSDKMTVKERIRFIAPGVLEDRITVTDPVALIEPWETVK
                     TYRKAEKGDDQLREFACAEGMDHAK"
     gene            complement(577..822)
                     /locus_tag="VFN38_04135"
     CDS             complement(577..822)
                     /locus_tag="VFN38_04135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010975.1"
                     /translation="MTDCLAALHEASYKRGTAAGVAAAHQQLGGLAAWHLMGLVVDAA
                     DSGNPGALVQAYTKVEADPAQYDAIWARWDAEKAKGS"
     gene            1202..>3026
                     /locus_tag="VFN38_04140"
     CDS             1202..>3026
                     /locus_tag="VFN38_04140"
                     /inference="COORDINATES: protein motif:HMM:NF019259.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1592 domain-containing protein"
                     /protein_id="HET9010976.1"
                     /translation="MRSGELALDSLDASNIAANAPVWEKVVRKVRTGAMPPAGMPRPD
                     EPTAAALVTSVTTALDRAATPNPGRPLLHRLNRAEYANVVRDLLAIDVDVRSLLPADD
                     SAFGFDNNADLLVVSPSLLDRYLSAADRVSALAVGDMTTAPGSDTFYTKGDQSQSQQV
                     DGLPLGTVGGLGVRYTFPLDGEYELRVALTRTNLDAIRGLEHPHQLEISVDGERVFLT
                     DIGGAAEAGQTGAISDRSDATDARLHVRVPVKAGPRLVAATFVRKMAENTNRLRPFLR
                     SNAGTYDSTGRPHVKSLTIKGPFNATGPGDTPSRQRVFICKPATASAEEPCARRIMTT
                     LARRAYRRPVGDRDVAPLMEFYRDGRKKGTFETGVQLALRRLLASPTFIFRVEEDPAN
                     VAAGAAYRVSDVELASRLSFFLWSSMPDEALLDLAATGRLRQPAVLDAQVRRMLADPK
                     ANALVENFAGQWLHIRNLQNIAPNTDEFPDFDNDLRDAFRRETELFFGSIVREDRDAL
                     DLMTADYTFVNERLAKHYGLSGIYGPQFRRVTLASDARRGLLGKGSVLLATSHADRTA
                     PTLRGKWILENLLGTPPPAPPANVPPFEQTATAKPRTIRERL"
BASE COUNT          490 a         1064 c         1029 g          443 t
ORIGIN      
        1 gccgtgccgc caccgcgccc aagctcacgc cggagtacct ggcgaagtgg caggcgatct
       61 cgaaggcgcg tgtcgccggc gactcgtcgt cggacaacac gctgaagtgc ctgccgcccg
      121 gcatgccggc catgatgaac atggcgtacg gcatggaggt gatgcagacg aaggacaaga
      181 tcacgttctt cagcgagctc aacgacgcgc tccgccgcgt gtatctcgac ggccgcaaac
      241 ccacgcagat cgtgctcgac gatcccacct atgccgggtt ctcgaccggt cactgggagg
      301 gcgacacgct ggtagtcgag acggtggcgc tgaaggacac cagctacatc gaaggcttta
      361 ccccgcacag cgacaagatg accgtcaagg agcgcatccg cttcatcgcg cctggcgtgc
      421 tcgaggaccg catcaccgtg accgatccgg tggcgctcat cgagccgtgg gaaaccgtga
      481 agacgtaccg caaagcggag aagggcgacg atcagctgcg cgagttcgcc tgtgccgaag
      541 ggatggacca cgcgaagtag ccgcgcgtcg gagggcctag gatcccttgg ccttctcggc
      601 gtcccagcgt gcccaaatag cgtcgtactg cgcggggtcg gcttccacct tcgtgtaggc
      661 ctggacgagc gcgcccgggt tgccgctgtc ggcggcgtcc acgacgagcc ccatgagatg
      721 ccaggcggcc aggccgccca gctgctgatg ggcagcagcc acgccggccg cggtgccgcg
      781 cttgtagctg gcctcgtgca gggcggcgag gcagtcggtc atgacggcgc gtgccacctc
      841 ggcggagcat ccgcgggcgg ccgcaatctg tgcgatgaat tgaggggtat ccaagattcc
      901 cgaatgatag cgccagggcg gcgtcaccca tcttggcgat gcgcggatag tggctaagat
      961 gctataaaca agccactttt cattgatgtg ggtgaattcg ccaggccctc gggcctctcg
     1021 tgggccggga cggcatctga cgcgcgtcgc ggtatgtctg gggctggccg tggccgcctc
     1081 gatttcgcct gcggccgcgg cgcggcagac gccgccggct gccgggcccg ggcgcagtgc
     1141 gaacgccgcg cctgttcgcg ccaccctcga tcagtactgc gtcacctgtc acaacgcgcg
     1201 cgtgcgaagc ggtgagctgg cgctcgactc gctcgacgcc tcgaacatcg ccgccaacgc
     1261 ccccgtgtgg gaaaaggtgg tgcggaaagt ccgcaccggc gccatgccgc ctgccgggat
     1321 gccgcggccg gacgagccga cggccgccgc gctcgtgacc agtgtgacca cggcgctcga
     1381 tcgcgcggcc acgcccaacc ccggccgtcc gctgctgcat cggctcaacc gcgccgaata
     1441 cgccaacgtg gtgcgcgacc tgctggccat cgacgtggac gtgcggtcgc tgctgccggc
     1501 cgacgattca gccttcggat tcgacaacaa cgcggacctg ctggtggtgt caccgtctct
     1561 cctcgaccgc tatctgtcgg ccgccgatcg ggtgagcgcc ctcgccgtcg gcgacatgac
     1621 gacggcgccg ggctcggaca ccttctatac gaagggcgac cagtcgcaga gccagcaggt
     1681 ggatgggctg ccgctcggca cggtgggcgg cctcggcgtg cgctacacgt tcccgctcga
     1741 cggggagtac gaactgcgtg tggcgctcac gcgcacgaat ctcgacgcga tccgcgggct
     1801 cgagcatccg caccagctcg agatttccgt ggacggcgag cgcgtgttcc tgacggacat
     1861 cggcggcgcc gcggaagccg gtcagaccgg cgccatcagc gaccggtccg acgcgaccga
     1921 cgcccggctg cacgtgcgcg tgccggtgaa ggcggggccg cggctggtcg ccgcgacctt
     1981 cgtccgcaag atggcggaga acaccaaccg cctgcgtccg ttcctccgca gcaacgccgg
     2041 cacctacgac tccaccggcc gtccgcatgt gaagtcgctc accatcaagg ggccgttcaa
     2101 cgccacgggg cctggcgaca cgccgagccg tcaacgtgtg ttcatctgca agccggcgac
     2161 cgcgtcggcg gaagagccgt gcgcgcggcg gatcatgacg acgctcgcgc gccgcgccta
     2221 tcgccggccg gtcggcgatc gcgatgtggc gccgttgatg gagttctatc gcgacgggcg
     2281 gaagaagggc acgttcgaaa ccggcgtcca gctcgcgctg cggcggctgc tggccagccc
     2341 cacgttcatc ttccgcgtcg aggaggaccc ggcgaacgtg gcggccggcg ccgcgtaccg
     2401 tgtgagcgac gtggagctgg cgtcgcgcct gtcgttcttc ctgtggagca gcatgccgga
     2461 cgaggcgctg ctcgacctcg ccgccacagg gcgcctgcgc cagccggccg tcctcgacgc
     2521 gcaggtgcgc cgcatgctgg cggacccgaa ggcgaacgcc ctcgtggaga acttcgcggg
     2581 gcagtggctg cacatccgca acctgcagaa catcgcgccc aacaccgacg agttccccga
     2641 cttcgacaac gacctgcgcg acgcgttccg gcgcgagacc gagctcttct tcggcagcat
     2701 cgtgcgcgag gaccgcgacg cgctcgacct gatgaccgcc gactacacgt tcgtgaacga
     2761 acggctggcc aagcactacg gcctctcagg catctatggt ccgcagttcc gccgcgtcac
     2821 gctggccagc gacgcacgcc gcgggctgct cggcaaggga agcgtcctcc tcgcgacgtc
     2881 gcacgccgac cgcacggccc cgaccctgcg cggcaagtgg attctcgaga acctgctcgg
     2941 cacgccgccg ccggcgccgc cggccaacgt gccgccgttc gaacagaccg ccacggcaaa
     3001 gccacgcacg attcgcgagc gtctcg
//
LOCUS       DASSYW010000264         3604 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_538562, whole genome shotgun sequence.
ACCESSION   DASSYW010000264 DASSYW010000000
VERSION     DASSYW010000264.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3604)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3604)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3604
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_538562"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..556
                     /locus_tag="VFN38_04145"
     CDS             <1..556
                     /locus_tag="VFN38_04145"
                     /inference="COORDINATES: protein motif:HMM:NF012455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aquaporin"
                     /protein_id="HET9010977.1"
                     /translation="ITATMRISGHLNPAVTLGFLAARRIEPMMAMVYIVAQLLGAALA
                     AYALKGIFPAEIAAATRLGGQSVALELSAGQAILCEFLATFFLTFVVFGTAVDPAAPK
                     VGGFAIGLTVTAGILAIGPLTGGSMNPARSFGPAVVSGILEGQAIYWIGPILGSVAAA
                     LLYDGLFLRRGKEPVDHGAVRPRG"
     gene            complement(659..1216)
                     /locus_tag="VFN38_04150"
     CDS             complement(659..1216)
                     /locus_tag="VFN38_04150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HET9010978.1"
                     /translation="MLNLWHDLPVGVNPPESVTAVIEIPSGSRNKYELDKASGMLKLD
                     RVLFSAVHYPGDYGFIPRTLHEDNDPLDVLVIVKEQTFPGCQIDVRPIGVLKMLDRGE
                     PDDKILSVPLHDPYHQEYFDIADIPQHMLKEVEHFFHTYKDLEGKRVEILGWGKSEEA
                     MRIIDESIVRYKATYGAKRELRADG"
     gene            complement(1217..2320)
                     /locus_tag="VFN38_04155"
     CDS             complement(1217..2320)
                     /locus_tag="VFN38_04155"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HET9010979.1"
                     /translation="MKYRLFPNTDVRVSEVGFGTWTVSTGWWGDKTDADAVAMMRRAL
                     DAHGINFFDAADAYGNGRAERQLAEAFRGRRDEIVIGTKIGYDIYDTAALAARRGQQE
                     LPMRTDPAFMRLAVERCLERLETDYIDVLQIHNAKMEHVRDPQVWATLRDLQREGKIR
                     AWGAAFGPAIGWLYEAVELVEREPDINTIQMIWNVLEQHPGSAMIEAARRHAPNCCFN
                     VRVTHASGMLEGKYTADTVFPESDHRRHRPRSWLVNGVEKVKTLDFLAREMTLGQAAL
                     KWLLAEPLVVTTLPNVYDDDQVAEFAAASELPDLPAEAMRRVHELDAVNFGVDEEPMK
                     YKGAMTRDHGANLDLQDARNPISRPATPAHRGA"
     gene            complement(2333..3328)
                     /gene="hemB"
                     /locus_tag="VFN38_04160"
     CDS             complement(2333..3328)
                     /gene="hemB"
                     /locus_tag="VFN38_04160"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004655 - porphobilinogen synthase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HET9010980.1"
                     /translation="MPSFPDYRPRRLRRTAALRSLVRETLLAPSQLVLPLFVRAGAGV
                     RQPVSSMPGVSQTSVDELVKDARAAAALGIGGVLLFGIPEHKDAEGSGAWDDEGPVQR
                     AVRALKREVPELVVITDVCMCEYTSHGHCGILRDGEVDNDATLPLLAREAVSHARAGA
                     DIVAPSDMMDGRVAAIRHALDDAGLEATAIMAYSAKFAGAFYGPFREAAESTPQSGDR
                     RGYQMDPGNAEEALREVRQDIEEGADMVMVKPAGPFLDIVARVKAETGYPLAAYQVSG
                     EFAMIQAAAERGWIDRERAMMESLLGIRRAGADIVITYFATDAARLLRAGAAGSL"
     gene            complement(3340..>3604)
                     /locus_tag="VFN38_04165"
     CDS             complement(3340..>3604)
                     /locus_tag="VFN38_04165"
                     /inference="COORDINATES: protein motif:HMM:NF015835.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010981.1"
                     /translation="AFLAALEGGCQVPIGALASPTPDGGAVLYGMIASIDGTRVVRGS
                     IALDPDDPGLSGIRLANELRGRGASEILEGLRRAEHLPSPQPE"
BASE COUNT          471 a         1333 c         1219 g          581 t
ORIGIN      
        1 gatcacggcg acgatgcgca tctccgggca tctcaacccc gccgtgaccc tgggcttcct
       61 cgccgcgcgg cgcatcgagc cgatgatggc gatggtctac atcgtcgccc agctgctcgg
      121 cgccgccctc gccgcgtacg cgctgaaggg gatcttcccg gcggagatcg cggcggccac
      181 gcggctcggc ggccagtcgg tggcgctgga gctctcggcc ggccaagcga tcctctgcga
      241 gttcctcgcg accttcttcc tcaccttcgt cgtgttcggc acggcggtgg acccggccgc
      301 gcccaaggtg ggcgggttcg ccatcggcct caccgtcacg gccggcatcc tcgccatcgg
      361 tcccctcacc ggcggatcga tgaaccccgc gcgctcgttc gggccggcgg tggtgagcgg
      421 catcctggag ggacaggcga tctactggat cggccccatc ctcggctccg tcgcggcggc
      481 gctgctgtac gacgggctgt tcctccgccg cggcaaggag ccggtggatc acggcgcggt
      541 gcggccgagg ggctgaggcc gtccaggcgg ctcgcgcgga tctgagccgc gcgagccgcg
      601 gcgatcgtcg gacgagaagg tgggccggcg cgcggcggcg gacagccgcc ggccgccgtc
      661 agccgtcggc cctgagctcg cgcttcgccc cgtacgtcgc cttgtaccgg acgatcgatt
      721 cgtcgatgat ccgcatcgcc tcctcgctct tgccccaccc caggatctcc acccgcttgc
      781 cctcgagatc cttgtaggtg tggaagaagt gctcgacctc cttcagcatg tgctgcggga
      841 tgtcggcgat gtcgaagtac tcctggtgat acggatcgtg cagcggcacg ctgaggatct
      901 tgtcgtccgg ctcgccgcgg tcgagcatct tcagcacgcc gatcggccgg acgtcgatct
      961 ggcagccggg gaaggtctgc tccttcacga tcaccagcac gtccagggga tcgttgtcct
     1021 cgtgcagggt gcgcgggatg aagccgtagt cgcccgggta gtgcacggcg ctgaacagca
     1081 cgcggtccag cttgagcatg ccgctcgcct tgtccagctc gtacttgttc cggcttcccg
     1141 aggggatctc gatgaccgcg gtgaccgact cggggggatt cacgcccacg ggaaggtcgt
     1201 gccacaggtt gagcatctac gcgcctcggt gcgccggcgt cgccggccgt gagatggggt
     1261 tgcgcgcgtc ctgcaggtcg aggttcgccc cgtggtcgcg cgtcatcgcc cccttgtact
     1321 tcatcggttc ctcgtcgacg ccgaagttca cggcgtccag ctcgtgcacg cggcgcatcg
     1381 cctcggccgg caggtcgggc agctcgctcg ccgccgcgaa ctccgccacc tggtcgtcgt
     1441 cgtacacgtt cggcagcgtc gtcaccacga ggggctcggc gagcagccac ttcagcgccg
     1501 cctgccccag cgtcatctcc cgggcgagga agtccagcgt cttcaccttc tccacgccgt
     1561 tcaccagcca gctccgcgga cggtggcggc ggtggtcact ctccgggaac acggtgtcgg
     1621 cggtgtactt cccctccagc atgccgctcg cgtgcgtcac ccgcacgttg aagcagcagt
     1681 tgggggcgtg gcggcgcgcc gcctcgatca tcgccgagcc ggggtgctgc tccagcacgt
     1741 tccagatcat ctggatggtg ttgatgtccg gctcgcgctc cacgagctcc accgcctcgt
     1801 acagccagcc gatggccggc ccgaacgccg cgccccacgc gcggatcttc ccctcgcgct
     1861 ggaggtcgcg cagcgtcgcc cacacctgcg ggtcgcggac gtgctccatc tttgcgttgt
     1921 ggatctggag gacgtcgatg tagtcggtct cgaggcgctc caggcagcgc tccaccgcca
     1981 ggcgcatgaa cgccgggtcg gtgcgcatcg gcagctcctg ctgcccgcgc cgcgccgcga
     2041 gcgcggccgt gtcgtagatg tcgtagccga tcttcgtgcc gatcacgatc tcgtcgcgcc
     2101 ggccgcgaaa cgcctcggcg agctggcgct cggcgcgacc gttcccgtac gcgtcggccg
     2161 cgtcgaagaa gttgatgccg tgcgcgtcga gcgcgcggcg catcatcgcc accgcgtcgg
     2221 cgtcggtctt gtcgccccac cagccggtgg agacggtcca cgtgccgaag ccgacctcgc
     2281 tcacgcgcac gtcggtgttg gggaagagac ggtacttcat cactgcctgc ggttagagcg
     2341 agcccgccgc gccggcgcgc agcagccgcg cggcgtcggt ggcgaagtag gtgatcacga
     2401 tgtcggcgcc ggcgcggcgg atgccgagca ggctctccat catcgcccgc tcccggtcga
     2461 tccatccgcg ctcggcggcc gcctgaatca tagcgaactc cccactcacc tggtacgcgg
     2521 ccagcggata gcccgtctcc gccttcacgc gggcgacgat gtccaggaag ggcccggccg
     2581 gcttcaccat caccatgtct gcgccctcct cgatgtcctg ccgcacctcg cgcagcgcct
     2641 cctcggcgtt gcccggatcc atctggtagc cgcgccggtc gccgctctgg ggcgtgctct
     2701 ccgccgcctc gcggaatgga ccgtagaacg cgccggcgaa cttggcgctg tacgccatga
     2761 tcgccgtggc ctccagcccc gcgtcgtcga gcgcatgacg gatcgccgcg acgcgcccgt
     2821 ccatcatgtc gctcggcgcc acgatgtcgg cgccggcgcg cgcgtgcgac accgcttcgc
     2881 gcgccagcag cgggagcgtg gcgtcgttgt ccacctcgcc gtcacgcagg atgccgcagt
     2941 gcccgtgcga cgtgtactcg cacatgcaca cgtccgtgat gaccacgagc tccggtacct
     3001 cgcgcttgag ggcgcgcacc gcccgctgca ccggtccctc gtcgtcccac gcaccggagc
     3061 cttcggcgtc cttgtgctcg gggatgccga acagcagcac cccgccgatg ccgagcgccg
     3121 cggcggcgcg cgcatccttc accagctcgt ccaccgacgt ctggctcacg ccgggcatcg
     3181 acgacaccgg ctgacgcacg cccgcaccgg cgcgcacgaa cagcggaagc accagctgcg
     3241 acggtgcgag cagcgtctcg cgcacgaggc tgcgcagcgc cgcggtgcgc cgcagccggc
     3301 gggggcggta gtcgggaaag gacggcatcg tgacggaatc tattccggct gcggcgatgg
     3361 caggtgctcg gcgcgacgca gcccctcgag gatctccgac gccccccggc cgcgcagctc
     3421 gttcgccagc cggatgccgc tcagtcccgg gtcgtccgga tcgagcgcga tgctgccgcg
     3481 cacgacgcgc gtgccatcga tggacgcgat catcccgtac agcaccgccc cgccgtccgg
     3541 ggtgggactc gccagcgcgc cgatgggcac ctggcagcca ccctcgagcg ccgcaaggaa
     3601 ggcg
//
LOCUS       DASSYW010000265         2366 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_300993, whole genome shotgun sequence.
ACCESSION   DASSYW010000265 DASSYW010000000
VERSION     DASSYW010000265.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2366)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2366)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2366
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_300993"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..190
                     /locus_tag="VFN38_04170"
     CDS             <1..190
                     /locus_tag="VFN38_04170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010982.1"
                     /translation="MLQGATLQLGRGRVAIFGEAAMFSAQVAGPRREPMGMNAPAAGQ
                     NAQFVLNTMHWLSGLVSR"
     gene            308..1318
                     /locus_tag="VFN38_04175"
     CDS             308..1318
                     /locus_tag="VFN38_04175"
                     /inference="COORDINATES: protein motif:HMM:NF044870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YncE family protein"
                     /protein_id="HET9010983.1"
                     /translation="MPDFGGPRRIAAFAATILVMGSGTHPALAQSARRGHVLVANQQA
                     ASASLIDLATDSMRFIEVGAGPHEAVISPSGRVGVVTVYGTQTPGNELAVIDVRSGTL
                     TKKITLAQYTRPHGAAFMPGDETRVVVTSEATQTIVLVNLETGAVEAAIPTGAQGSHM
                     VGLTRDGTRAFTSDVGTGAVSEMDLTQKALVRVIPTGPRTEGIAVAPDGSTVWAGSNT
                     NGTVSVIDAKSGVLIETLGGFSLPYRLAISADGKTAIICDPQANAIHVADVATRKVLW
                     KLESLGSPRGVTIAPDGKTAFVTLAAEPAVGVIDLVEKKLVRKIGVGASPDGVGFGPP
                     AA"
     gene            1497..>2366
                     /locus_tag="VFN38_04180"
     CDS             1497..>2366
                     /locus_tag="VFN38_04180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="BTAD domain-containing putative transcriptional
                     regulator"
                     /protein_id="HET9010984.1"
                     /translation="MGDQRVTPESDVLFALLLYVSSSVGRVVPRSELLELLWPQSGQA
                     SARHRLRQALYQAKKLGVSLVAPDASIVVAESDVEVDYVECVRSREALMRAVASRAIE
                     FLPRYAPTFSLAFARWVEEERDRVRSLLRDSLSDQFVRSRSRGDHDAVVPLARAYLEL
                     DPLNSQATLALAESLAVLGSRAEALGILDRYRLEACEDDEDLARAVIGLRRRIIAVAR
                     RSSGAGPALLTGRSDAVTELNAWLASGIHGARVYAFCGEAGIGKTRLVNEGVRIATLR
                     GTRCVEYRPSAAGN"
BASE COUNT          373 a          695 c          887 g          411 t
ORIGIN      
        1 tatgctgcag ggcgccacgc tgcaactcgg gcgcggccga gtcgcgatct tcggggaagc
       61 cgcgatgttc tccgcccagg tcgccgggcc gcggcgcgag ccgatgggga tgaacgcgcc
      121 ggcggcgggg cagaacgcgc agttcgtgct gaacacgatg cactggctat ccgggctggt
      181 ctcgcggtag cgcgcgactg gtcggctcgc ctgacgagga ggtggtacta gccgtcgatc
      241 catgcggacg gcgaagttcc gcgggtcgcg tcgcggggtt ggcccggacg ccagccctcg
      301 agtgcccatg cctgacttcg gaggtccgcg gcgaatcgcc gcgttcgccg ctaccatcct
      361 cgtgatggga tccggcaccc atcccgcact cgcacagagc gcgcgtcgcg gccatgtcct
      421 cgtcgcgaac caacaggcgg cgagtgcttc gctcatcgac ctggcgaccg acagcatgcg
      481 cttcatcgaa gtcggcgccg gcccgcacga ggccgtgatc tcgccgagcg ggcgtgtggg
      541 cgtcgtgacc gtctatggta cgcagacacc cgggaacgag ctggccgtca tcgacgtcag
      601 gtcggggaca ctcacgaaga agattacgct cgcgcagtat acgcggcctc acggcgcggc
      661 gttcatgccg ggcgatgaga cgcgggtcgt cgtcacgtcg gaagcgacgc agaccatcgt
      721 gctggtgaac ctcgagaccg gcgcggtgga ggcggcgatt ccgacggggg cacagggctc
      781 gcacatggtc ggcctaacga gagacgggac acgcgcattc acgtcggacg tcggtaccgg
      841 tgcggtctcg gagatggatc tcacgcagaa ggcgttggtg cgggtgattc cgaccggccc
      901 gcggacggag gggatcgcgg tggccccgga tggcagcacc gtgtgggctg gcagcaacac
      961 gaacgggacc gtgagcgtga tcgacgcgaa gagcggcgtg ctgatcgaga ctcttggcgg
     1021 cttctcgctg ccgtaccggc tcgcgatctc ggcggacggg aagacggcga tcatctgcga
     1081 cccgcaggcg aacgcgattc acgtggccga cgtggcgacg cggaaggtgc tgtggaagct
     1141 cgagtcgtta ggctcaccgc gcggcgtgac gattgcgccg gatgggaaga cggcgttcgt
     1201 gacgctcgcg gcggagccgg cggtgggcgt gatcgacctc gtggagaaga agctcgtccg
     1261 gaagatcggc gtgggggcgt cgccggacgg cgtggggttt ggtccgccgg cggcgtgatt
     1321 gccggatcgg ctcgcccggc cctcgtcgaa ccaacgcgta agtccaagtc cggcaggcga
     1381 atgacgcctg actgacgcgt tgcctttcct ttcccatcgg gcgaccttgt ccggtcggaa
     1441 ctcgggacgg gagtggcgtg atacgactgc gcgcgttagg gcgatgcgtt gtcgaggtgg
     1501 gtgaccagcg cgtgacgccc gaatcggacg ttttgttcgc gctgttgctc tacgtgagca
     1561 gcagcgtggg tcgtgtcgtg ccgcgcagtg agctgctcga gttgttgtgg ccgcagagtg
     1621 gtcaggcgag tgcgcggcat cgcttgcggc aggcgctcta tcaggcgaag aagctcgggg
     1681 tttcgctggt agcgccggat gcgtcgatcg tggtggcgga gtcggacgtg gaggtcgact
     1741 acgtcgagtg tgtgcggagt cgtgaggcgt tgatgcgggc ggtggcgtcg cgggcgatcg
     1801 agttcctgcc gcgttatgcc ccgacgtttt cgctggcgtt tgcgcggtgg gtggaggagg
     1861 agcgggatcg ggttcggtca ctgcttcgcg acagccttag tgaccagttc gtccgatcgc
     1921 gatcgcgagg ggaccacgac gctgtagtac cgctcgcacg tgcctatctc gagctcgatc
     1981 cactgaacag tcaggcgacg ctcgcgctcg ccgaatcact cgcagtactt ggcagcaggg
     2041 cggaggcgct cggcatccta gatcggtacc gtctcgaagc ctgcgaggat gatgaggatc
     2101 tcgctcgcgc ggtcataggt ctacgacgaa ggattattgc cgttgcccgt agaagttcgg
     2161 gcgccgggcc ggcactccta acaggtcgat ccgacgccgt gaccgagctg aacgcctggc
     2221 tagcgagcgg catacatggc gcccgagtct atgcattttg cggtgaggcg ggaattggca
     2281 aaacccgact ggtgaatgag ggtgtgcgga ttgcgacgct ccgcggaaca cgctgtgtcg
     2341 agtaccggcc cagcgctgcg gggaat
//
LOCUS       DASSYW010000266         2275 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1828170, whole genome shotgun sequence.
ACCESSION   DASSYW010000266 DASSYW010000000
VERSION     DASSYW010000266.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2275)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2275)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2275
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1828170"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1482)
                     /locus_tag="VFN38_04185"
     CDS             complement(<1..1482)
                     /locus_tag="VFN38_04185"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HET9010985.1"
                     /translation="MSVAALAIRHSRAAMLVTIALVVAGAISAFSLPSSIYPPLQFPR
                     IVTIVKSGTLPSQSMMLTVTRPVEQAVMEVPGIRRVRSRSIRGAAEISAQFDPATDMV
                     VALQQVQNRVAEIRGELPADVQLTVERLTPEVFPVFILSMTGKLPTPELSDYARYVVR
                     PELARVPGAGTIEVLSSDTREIEVVLDPLKLTSAALTVQDVANALKAQNQLEPVGRVD
                     QAAQQHLVLASGLWASVADIAAAPVQVKGGATTRVGDLGAVAPGSPDRTLLVTGNGRD
                     AVSISISQQIGANILAVKQGVDAALADLKQTLPAGITITKVYDLAEFVSDAIASVRDA
                     ILIGGFLAVVVLIVFLRNVRLTAIAALTLPLAVIPTFVFMRIFGGTINQMSMGGLAVA
                     IGLVIDDAVVVVENIHRRAHEGPEAAERAVSELMAPLVSSTLTTVVVFAPLSLLSGVP
                     GQFFRALSVSLAVAVILSLFLSITVVPLLARWAFRHGPMPEERE"
     gene            complement(1479..>2275)
                     /locus_tag="VFN38_04190"
     CDS             complement(1479..>2275)
                     /locus_tag="VFN38_04190"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HET9010986.1"
                     /translation="ADVAIKRGELARAQARLENARAAQARAHDLFDRGIAARKEVENA
                     DRELADAQAGVTEAEATLGASQTSAARATIRATFDGVVAKRAHNPGDSVEAAASDPVL
                     RVVDPKRLEVTASIPVADVGRVAMGASAQLVSPDGSAPATLKVISRPAAVDANTAAAP
                     VRLAFLSPTGIPIGAPVQLTIEGEEHRGVVLVPAAAVTHEGEEAAVFVVNGEMAQRRV
                     VTLGITDGAHAEIRSGIKAGEAVIVTGQAGLPDGAAITLAKPEPAP"
BASE COUNT          367 a          782 c          794 g          332 t
ORIGIN      
        1 ctcgcgctcc tcgggcatgg ggccgtggcg aaaggcccac cgcgccagca gcggcaccac
       61 cgtgatcgag aggaacagcg agaggatgac ggccaccgcc aggctcaccg acaaggcacg
      121 aaagaactga cccggcaccc ccgagagaag actgagcggc gcgaacacaa ccactgtcgt
      181 caacgtcgag ctgaccagcg gcgccatcaa ctctgatacc gcgcgctcgg ccgcttccgg
      241 accctcgtgc gcgcggcggt ggatgttttc cacaaccacc acggcgtcgt cgatgaccag
      301 gccgatcgcg accgccaggc cgcccatcga catctgattg atcgtgccgc cgaagatccg
      361 catgaagacg aaggtcggga tcacggcgag cggtagcgtc agcgcggcga tcgcggtcag
      421 ccggacgttc cgcaggaaga cgatcaggac gacgacggcg aggaagccgc cgatcaggat
      481 ggcgtcgcgc acgctggcga tggcgtcgct gacgaactcg gcgagatcgt agaccttcgt
      541 gatcgtgatg ccggcgggga gcgtctgctt cagatcggcg agcgccgcgt ccacgccctg
      601 cttcacagcc aggatgttgg cgccaatctg ctgcgaaatg ctgatcgaga cggcgtcgcg
      661 gccgttgccg gtgaccagca gcgtccggtc cggcgagccc ggcgcgacgg cgccaaggtc
      721 gccgacgcga gtggtggcgc cgcctttgac ctgtaccggc gcggcggcga tgtcggcaac
      781 cgaggcccag agcccggacg ccagcacgag gtgctgctgc gctgcctggt ccacacggcc
      841 caccggttcg agttgattct gggctttgag cgcgttggcg acgtcctgca cggtcagcgc
      901 ggcgctggtg agcttcagcg gatcgagcac cacctcgatc tcgcgtgtat cgctcgagag
      961 cacttcgatc gtgccggccc ccggcacgcg cgccagttcc gggcgcacga cgtagcgggc
     1021 gtagtcgctc agctcggggg tcgggagctt gccggtcatg ctcaggatga agaccggaaa
     1081 cacctctggg gtcagccgct cgacggtcag ctggacatcg gccggcaact cacctcggat
     1141 ctcggcgacg cggttctgca cctgctgcag cgcgacgacc atgtccgtcg ccggatcgaa
     1201 ctgcgctgag atttcagcgg cgccgcggat gctgcgcgat cgcacacgac ggatgcctgg
     1261 cacctccatc accgcctgct cgaccggccg ggtcacggtc agcatcatcg actgcgacgg
     1321 cagcgtgccg ctcttgacga tcgtgacgat gcgggggaac tgcaggggcg ggtagatgct
     1381 gctcggaagc gagaacgcgg agatcgcccc cgccacgacc agcgcaatcg tcacgagcat
     1441 ggccgcccgc gaatggcgga tggccagcgc ggcaacgctc acggcgccgg ctccggcttg
     1501 gccagcgtga tggcggcccc atcgggcagt ccggcctggc cggtgacgat gacggcttcg
     1561 cccgccttga tgccggagcg gatctcggca tgcgcgccat cggtgatgcc gagcgtgacg
     1621 acgcggcgct gcgccatctc gccgttcacg acgaagaccg cggcctcttc cccttcatgg
     1681 gtgacggcgg cggccggcac gagcacgacg ccgcgatgtt cctctccttc aatcgtcagc
     1741 tgcacaggtg cgccgatcgg gatcccggtg ggagagagga acgcgagtcg aacaggcgcg
     1801 gcggccgtgt tggcgtcgac ggccgccgga cgcgagatga ctttgagggt agctggagcg
     1861 ctgccatcgg gactgacgag ctgcgcgctg gcgcccatcg caacacgccc gacatccgcc
     1921 acgggaatcg aggccgtgac ctcgaggcgc ttcggatcga ccacccggag cacggggtca
     1981 ctggcggccg cttccaccga atcgccagga ttgtgcgcgc gcttggccac gacgccgtcg
     2041 aacgtggcgc ggatcgtcgc gcgggcggcg gaggtctgtg acgcccccag cgtcgcctcg
     2101 gcctcggtga cgccggcctg cgcgtccgcc agctcacggt cggcgttctc gacttccttg
     2161 cgtgcggcaa tcccccgatc gaacagatcg tgggcgcgtg cctgcgcggc gcgcgcgttc
     2221 tcgagacgag cctgcgcccg cgcgagctcg ccgcgcttga tcgccacgtc cgccg
//
LOCUS       DASSYW010000267         4905 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1607011, whole genome shotgun sequence.
ACCESSION   DASSYW010000267 DASSYW010000000
VERSION     DASSYW010000267.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4905)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4905)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4905
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1607011"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1204
                     /locus_tag="VFN38_04195"
     CDS             <1..1204
                     /locus_tag="VFN38_04195"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HET9010987.1"
                     /translation="MTTGIRILVAVAVVVAIGVGAWFYLTRGRESTDDAQVDAHVTPI
                     AARVGGIVLRVPVTDNQPVEAGTVLVEIDRREYEIALERARAELANAEAELAAANANV
                     PITATSTSSGVSTATSGVEQAQVQAEEARHNLEAAEARLATARAKISGEEATATRDDR
                     DAERLKGLLAKDEVSQQQYDAAVARAQSSRANVAVAQSQVREAETAIKAAQSRIAQAK
                     VGQSVASAELRTAQTAPQQVAAIRARAQSSAARVKQAQAAVGRAELDLEHATVKAPIK
                     GVVSRKSAEPGQVVQPGQPLMTIIPLDQVWITANFKETQLEGMRVGQRVSIDVDAYGG
                     RDFADKVDSIAAATGSRFSLLPPENATGNFVKVVQRVPVKIVLDAGQDPNHLLRPGMS
                     VTPTVYTR"
     gene            1235..2782
                     /locus_tag="VFN38_04200"
     CDS             1235..2782
                     /locus_tag="VFN38_04200"
                     /inference="COORDINATES: protein motif:HMM:TIGR00711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HET9010988.1"
                     /translation="MSKPVNPWIVAIAVMFATFMEVLDTTVVNVSLPHIASSMAATTE
                     EATWAVTSYLVANAIILPMTGWLASRFGRKRLLMMSTAGFTMASFLCGAAPNLASLVI
                     FRIIQGATGGPLQPLSQAVLLESFKPEERGRAMGFWGLGIVVAPILGPVVGGWLTENY
                     TWRWVFYINLPFGLISLLMCQRFVFDPPYLKRESKGIDYWGMGLLVVGIGALQYVLDK
                     GQQDDWFANTTIAVLAVVSGVALTALIIQQLVSKSPIVDLRLFKDRSYAVGVFLMTVL
                     GFVLYGSLVLLPVMLQTLFGFSSYQAGQAMMPRGVGSLVMMPTVGYLTGHVDARKLLI
                     VGLAIGGGTLLWLGQIDLNAGYWEIFWPQLIQGAGLALLFVPLTTVSMATISQERMGY
                     ATSMFNLMRNIGGSVGIAITATIQQRERVRIGSYMGENVSAYDASTQTLLAQITSGLV
                     AAGSDMVTATQRAYVILNGMLFRQASMVSFVMLFRLLGVIFLLMIPLVFIMRRPKRGG
                     GASAAAH"
     gene            2793..3350
                     /locus_tag="VFN38_04205"
     CDS             2793..3350
                     /locus_tag="VFN38_04205"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Maf family protein"
                     /protein_id="HET9010989.1"
                     /translation="MLPLVLASASPRRAQLLRDAGIPFEVAAADVDESQHPGEEAEAY
                     VRRVAAAKAARVAGSHPGRPVLGADTTVVLDGEVLGKPRDAAEAASMLRRLSGRSHLV
                     LTGVCLIAPAGGIQTAVAATAVEFLPLDAAQIAAYVATGEPMDKAGAYAIQGGAGRFV
                     RRVDGELANVIGLPISVVADMLRGI"
     gene            complement(3355..3999)
                     /locus_tag="VFN38_04210"
     CDS             complement(3355..3999)
                     /locus_tag="VFN38_04210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010990.1"
                     /translation="MPVHTRVRSWLAVLAAAATLVAPDAAAQTPSTGAGAPAMRAAGM
                     ALRDGALAPGMLTVRVVRGSFDRNAANETVQVDVDGRLESATTDAGGRAQFAHLPIGA
                     SVQATAVVDGEPLVSERFAMAAESGIRVLLIAGAGAASASGIPTLPVPEAAPGADAAA
                     GGSAAQPQPAASPDDATVTGIRVAFVMTTVFALALVVFGKYGWRPWRPRRTPEA"
     gene            complement(3999..>4905)
                     /locus_tag="VFN38_04215"
     CDS             complement(3999..>4905)
                     /locus_tag="VFN38_04215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010991.1"
                     /translation="ATGVRFRAGAFGGREPNPLTTGYATGVTKMGGYAAIESGFLRRH
                     LVGYTRVTQSGMIERSVLSVANFVPAGSRFFLYQTAEYDVKGPGDGAGRSGLSYFLAN
                     ARANPTTRVELSGSYNRGRSIDARTLTSDLLNGRPLTPQATEGLRYESAAGRVSVQVT
                     RTLRLYVSYGQDRTNRDDARTGRVTWGGYASNVFRSGFDVSGSDALIDRPNGAYHSRY
                     LSIGRSVGRAVYVSGDYSTSLSVVQFLRSDGLLIETRPWTRRYSASANVTMNRSLSLM
                     VTADYTVDEAERDLRLLSGLSYRLR"
BASE COUNT          746 a         1659 c         1748 g          752 t
ORIGIN      
        1 gatgaccaca gggattcgaa tcctggtcgc cgtggccgtg gtggtggcca tcggcgtggg
       61 cgcatggttc tacctgacgc gcggccgcga atccaccgac gacgcgcagg tcgatgcgca
      121 cgtgacgccg attgccgcgc gtgtaggggg catcgtcctc cgtgtgccgg tgaccgacaa
      181 ccagccggtc gaggcgggca ccgtcctcgt ggagatcgat cggcgcgagt acgagatcgc
      241 gctcgagcgt gcgcgggcgg aactggccaa cgccgaagcg gagctggcgg ccgccaacgc
      301 caacgtgccg atcacggcca cgtccacgag cagcggcgtg tccaccgcca cgagcggcgt
      361 ggagcaggcc caggtgcagg ccgaggaggc ccggcacaat ctggaggccg ccgaggcacg
      421 cctcgcaacg gctcgcgcga agatctccgg agaggaagcc accgctacgc gcgacgaccg
      481 cgacgccgag cgtctcaagg ggctgctcgc gaaggacgaa gtgtcgcagc agcaatacga
      541 cgccgccgtg gcgcgcgcgc aatcgtcgcg tgccaacgtc gccgtggccc agtcgcaggt
      601 ccgggaggcc gagacggcca tcaaggcggc gcagtcgcgg atcgcccagg ccaaggtggg
      661 gcagtccgtg gcgagcgcgg agctgcggac cgcgcagacg gccccgcagc aggtggccgc
      721 gattcgcgcg cgcgcgcagt cctcggccgc gcgcgtgaag caggcacagg cggcggtcgg
      781 ccgcgcggag ctcgatctcg agcacgccac ggtgaaagcg ccgatcaagg gcgtggtgag
      841 ccgcaagtcg gccgagccgg ggcaggtggt gcagccgggg cagccgctga tgacgatcat
      901 cccgctcgac caggtgtgga tcaccgcgaa cttcaaggag acgcagctcg agggcatgcg
      961 cgtggggcag cgcgtgtcga tcgacgtcga tgcgtacggc ggccgtgatt tcgccgacaa
     1021 ggtcgacagc atcgccgccg ctaccggctc gcgcttcagc ctgctgccgc cggagaacgc
     1081 caccgggaac ttcgtgaagg tggtgcagcg cgtgcccgtg aagatcgtgc tcgacgccgg
     1141 ccaggatccg aaccacctcc tccggcccgg catgtccgtg acgccgaccg tctacacgcg
     1201 gtaggcaggc ctgaaggcct gcagctacga gcgcatgagc aaaccggtca atccgtggat
     1261 cgtggccatc gcggtcatgt tcgccacctt catggaggtg ctggacacga ccgtggtgaa
     1321 cgtgtcgctg ccgcacatcg cgagcagcat ggccgccacg accgaggagg cgacgtgggc
     1381 ggtgacgtcg tacctcgtcg ccaacgccat catcctgccg atgaccgggt ggctcgcgtc
     1441 gcgcttcggg cgcaagcggc tgctgatgat gtccaccgcc ggcttcacga tggcgtcgtt
     1501 cctgtgcggt gccgcgccca atctggcctc gctcgtgatc ttccgcatca tccagggcgc
     1561 caccggcggc ccgttgcagc cgttgtcgca ggcggtgctg ctcgagtcgt tcaagccgga
     1621 agagcgcggc cgcgccatgg gcttctgggg gctcggcatc gtggtggcgc cgatcctcgg
     1681 accggtggtg ggcggctggc tcaccgagaa ctacacctgg cgctgggtct tctacatcaa
     1741 cctgccgttc ggcctcatct cgttgctgat gtgccagcgg ttcgtcttcg atccgccgta
     1801 cttgaagcgc gagtcgaagg gtatcgacta ctggggcatg gggctgctgg tcgtcgggat
     1861 cggcgcgctg cagtacgtgc tcgacaaggg gcagcaggac gactggttcg cgaacacgac
     1921 catcgcggtg ctcgcggtcg tctctggcgt cgccctgacg gcgctcatca tccagcagct
     1981 ggtgtcgaaa agcccgatcg tggatctgcg tctcttcaag gatcgcagct acgccgtggg
     2041 cgtgttcctg atgacggtgc tgggcttcgt gctgtacggc agcctcgtcc tgctgccggt
     2101 gatgctgcag acgctcttcg ggttctcgtc gtaccaggcg gggcaggcga tgatgccgcg
     2161 cggtgtcggc tcgctggtga tgatgccgac cgtcggctat ctcacggggc acgtcgacgc
     2221 gcgcaaactc ctcatcgtgg ggctggccat cggcggcggc acgctgctgt ggcttggcca
     2281 gatcgacttg aatgcgggct actgggagat cttctggccg cagctcattc aaggggccgg
     2341 cctggcgctg ctgttcgtgc cgctgacgac ggtgtcgatg gccaccatct cgcaggagcg
     2401 catgggctac gccaccagca tgttcaacct gatgcgcaac atcggcggca gcgtcggcat
     2461 cgccatcacg gccaccatcc agcagcgcga gcgcgtccgg atcggctcct acatgggcga
     2521 gaacgtcagc gcctacgacg ccagcacgca gacgctgctg gcgcagatca cgagcggcct
     2581 cgtggccgcg ggctccgaca tggtcacggc cacgcagcgt gcctacgtga tcctgaacgg
     2641 catgctcttc cggcaggcgt cgatggtgtc cttcgtgatg ctgttccgcc tgctcggcgt
     2701 catcttcctg ctgatgattc cgctcgtctt catcatgcgg cgtcccaaac gcgggggcgg
     2761 cgccagcgcc gcggcccact aaggcgtcgt cggtgctccc actcgtcctc gcgtccgcct
     2821 cgccccggcg cgctcagctc ctgcgcgacg ccggtatccc cttcgaggtg gcggccgccg
     2881 acgtcgacga gagccagcac cctggtgaag aggccgaagc ctacgtgcgc cgagtcgccg
     2941 cagccaaagc ggcccgcgtc gccggctcgc atccggggcg gcccgtgctc ggcgccgaca
     3001 cgacggtcgt cctggacggt gaagtgctcg ggaaaccgcg tgacgcggcg gaggccgcgt
     3061 cgatgctccg gcggctgtcg ggccgcagcc atctcgtgct caccggcgtc tgcctcatcg
     3121 ccccggccgg tggcatacag accgcggtgg ccgcgacggc ggtggaattc ctgccgctcg
     3181 acgccgcaca gatcgccgcc tacgtcgcga ccggcgagcc gatggacaag gccggggcgt
     3241 acgcgatcca gggtggagcg ggccgcttcg tgcgccgtgt agacggcgaa ctggcgaacg
     3301 tcatcgggct gcccatcagc gtcgtcgcgg atatgctccg cggcatctga cggttcatgc
     3361 ctccggggtg cggcgcgggc gccacggccg ccagccgtac ttcccgaaca cgacgagtgc
     3421 caaggcaaac accgtcgtca tgacgaaggc tacccggatg cccgtcaccg tcgcatcgtc
     3481 ggggctcgcc gcgggctgcg gctgcgcggc ggagccgccg gccgcggcat cggcacctgg
     3541 cgccgcttcg gggacaggca gggtgggaat gccgctggcg cttgcggccc ccgcgccggc
     3601 gatcagcagg acgcgaatgc cgctctcggc cgccatggcg aagcgttccg acaccagcgg
     3661 ctcgccgtcg accaccgccg ttgcctgcac ggaggctcca atcggaagat gcgcgaactg
     3721 cgcgcgcccg ccggcgtcgg tcgtcgcgct ctcgagacga ccgtcgacgt cgacttggac
     3781 ggtctcgttg gcggcgttgc gatcgaacga gccgcgtacc acgcgtacgg tgagcattcc
     3841 tggagcgaga gcgccatccc gaagcgccat cccggcggct cgcatcgcgg gcgcgcccgc
     3901 tccggtcgac ggcgtctggg ccgcggcgtc gggcgcgacc agcgtggcgg ccgcggccag
     3961 cacggcgagc catgaacgga ctcgggtgtg gacaggcatc agcgcaaccg gtacgaaagg
     4021 cccgacagca ggcggaggtc acgctcggcc tcgtcgaccg tgtaatcggc ggtcaccatc
     4081 agcgacaggc tccggttcat cgtgacgttg gccgaggcgc tgtagcgtcg cgtccacgga
     4141 cgcgtttcga tgagcagccc gtcgctgcga aggaactgca cgacggaaag cgaggtcgag
     4201 tagtcgccgg acacgtagac ggcgcggccg acgctgcggc caatcgacag gtagcgcgag
     4261 tgataggcgc cgttcggccg atcgatcagc gcgtcggagc ccgacacgtc gaagccgctg
     4321 cggaacacgt tcgacgcgta gccgccccag gtgacacgcc cggtccgggc gtcgtcgcgg
     4381 ttggttcggt cctggccgta cgacacgtag agccgcaggg tgcgcgtgac ctggacgctg
     4441 acgcggccgg cggccgattc gtagcgcagc ccttcagtgg cctgtggcgt cagcgggcgg
     4501 ccattgagca ggtcgctggt cagcgtgcgc gcgtcgatgg aacggccgcg attgtagctt
     4561 cccgagagct cgacacgagt cgtgggattg gcgcgagcgt tcgccaggaa gtacgacagt
     4621 ccggaacggc cggcgccgtc gcccggccct ttcacgtcgt actccgcggt ctggtagagg
     4681 aagaacctgg accccgcggg cacgaagttg gcgacgctca gcaccgagcg ttcgatcatt
     4741 ccgctttggg tgacgcgcgt gtagcccacg agatgccgcc gcaggaagcc gctttcgatc
     4801 gccgcgtagc ctcccatctt ggtcacaccg gtcgcgtagc cggtcgtgag cgggttcggc
     4861 tcgcgaccgc cgaacgcacc ggcccgaaac cgaaccccgg tggcg
//
LOCUS       DASSYW010000268         2049 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_669521, whole genome shotgun sequence.
ACCESSION   DASSYW010000268 DASSYW010000000
VERSION     DASSYW010000268.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2049)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2049)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2049
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_669521"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1175)
                     /locus_tag="VFN38_04220"
     CDS             complement(<1..1175)
                     /locus_tag="VFN38_04220"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HET9010992.1"
                     /translation="MPERAAVVVVGGGVIGASVAVRLRQRLKDARVVVVERDPTYARA
                     SSNLATGGIRQQFDSPLNVAMARYGASFYRRFDELTAGCGHRSRAWFRQRGYLFLADE
                     GNAERLERTFESRKASGANVVRWTQAEVAERCDGLATHDVAFGIFGPEDGYLDPREVH
                     AGLRAMATSAGVELVHGTVVEVERAGGRVAGVRVQTSDGDETIAAPVVVNAAGAYAAT
                     VGRAAGLTLPIDPVRQHLFRLLLEEPLPTRIPMIFDPDGTHWRLDDPRSVADDECLVI
                     GRSRGDEPVGENFECDHARLEQEMLPTLARRYPGARVRSVIEGWAGLYEMTPDHNALL
                     GEHPQLPGFVVAAGFSGHGLMMAPATGRAIAELIADGESRTFDIAPLAVDRFERGMP"
     gene            1401..>2049
                     /locus_tag="VFN38_04225"
     CDS             1401..>2049
                     /locus_tag="VFN38_04225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010993.1"
                     /translation="MKTSAMIALLVGAGACATPARIGTGSSTMSFFITSNGPGLGADL
                     GGLAGADEYCRKLAESAGAGDRTWRAYLSTQAKDGQPAVNARDRIGTGPWYNAKGVRV
                     ATDVANLHSDANALSKANSLTEHGAVVNGRGDSPNRHDIMTGSQLDGTAFPVADDKTC
                     ANWTARGAGSAQVGHHDRQGGGDNPTSWNSAHPSRGCSQENLRSSGGDGLFYCFAL"
BASE COUNT          303 a          749 c          748 g          249 t
ORIGIN      
        1 aacggcattc cccgctcgaa ccggtccacc gccagcggcg cgatgtcgaa ggtgcgcgac
       61 tcgccatcgg cgatcagctc ggcgatcgcg cgccccgtcg cgggcgccat catcagcccg
      121 tgcccgctga agccggcggc caccacgaac ccgggcagct gcggatgctc gccgagcagc
      181 gcgttgtgat cgggggtcat ctcgtacagg ccggcccagc cctcgatcac cgaccgcacg
      241 cgcgcgcccg ggtagcgcct ggcgagggtg gggagcatct cctgctcgag ccgcgcgtgg
      301 tcgcactcga agttctcccc caccggctcg tcgccgcgcg agcggccgat cacgaggcac
      361 tcgtcgtccg ccaccgagcg cgggtcgtcg agccgccagt gggtcccgtc gggatcgaag
      421 atcatcggga tgcgcgtggg gagcggctct tcgagcagca ggcggaagag atgctggcgc
      481 acgggatcga tgggcagggt gagccccgcc gcccgaccaa cggtcgcggc gtaggcgccg
      541 gccgcgttca ccaccaccgg cgccgcgatc gtctcgtcgc cgtcggacgt ctgcacgcgc
      601 acgccggcga cgcggccccc ggcacgctcc acctccacca cggtgccgtg cacgagctcc
      661 acgccggccg acgtcgccat cgcgcgcagc ccggcgtgca cctcgcgcgg atcgaggtag
      721 ccgtcctcgg ggccgaagat gccgaaggcg acgtcgtgcg tcgcgagccc gtcacagcgc
      781 tccgccacct ccgcctgcgt ccaccgcacg acgttcgcgc cgctcgcctt ccggctctcg
      841 aaggtgcgct ccagacgttc ggcgttgccc tcgtcggcga ggaagaggta gccccgctgc
      901 cggaaccagg cgcgcgagcg atggccgcat cccgcggtga gctcgtcgaa gcggcggtag
      961 aagctggcgc cgtagcgtgc catcgccacg ttgagcggcg agtcgaactg ctggcggatg
     1021 ccgccggtgg ccaggttcga cgaggcgcgc gcgtaggtgg gatcgcgctc gacgacgacg
     1081 acgcgggcgt ccttcaggcg ctggcggagc cgcaccgcca cgctcgcccc tatcacccct
     1141 ccgccgacga cgacgaccgc ggctctctcg ggcatctgcc actccggacg atggttcaca
     1201 ggcaaatagg caacgcggcg agcccggtcg caatgcggcg ggcggccccc tcccctggag
     1261 ggcggccacc gggcttccga tgccagcgct cgccagcgat gctcggctgg cgcacgggtg
     1321 agggcggcat cagcttcagg gctcggcacg cgcgccgtgc ggcgcgcggg gattcagcga
     1381 acgcgaaccg gagacgggcc atgaagacct cggcgatgat cgcactgctg gtgggcgcgg
     1441 gggcgtgcgc cacgcccgcc cgcatcggta cgggcagctc gaccatgagc ttcttcatca
     1501 cgagcaacgg cccggggctc ggcgcggacc tcggcggcct ggccggcgcg gacgagtact
     1561 gccgcaagct ggccgagtcg gccggcgccg gagaccggac gtggcgggcg tatctcagca
     1621 cgcaggcgaa ggacggccag cccgcggtga acgcgcgcga ccgcatcggc acggggccct
     1681 ggtacaacgc gaagggagtg cgcgtggcca ccgacgtggc gaacctgcac agcgacgcga
     1741 acgcgctgag caaggccaac tcgctcaccg agcacggtgc ggtggtgaac gggaggggcg
     1801 actcgccgaa ccggcacgac atcatgaccg gctcgcagct cgacggcacc gccttccccg
     1861 tggccgacga caagacctgc gccaactgga cggcgcgcgg cgcggggagc gcgcaggtgg
     1921 gccatcacga ccggcagggc ggcggcgaca acccgacgtc gtggaactcg gcgcatccgt
     1981 cgcgcggctg cagccaggag aacctgcggt cgtcgggcgg ggacgggctg ttctactgct
     2041 tcgcgctgt
//
LOCUS       DASSYW010000269         3302 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_332006, whole genome shotgun sequence.
ACCESSION   DASSYW010000269 DASSYW010000000
VERSION     DASSYW010000269.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3302)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3302)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3302
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_332006"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(143..1288)
                     /locus_tag="VFN38_04230"
     CDS             complement(143..1288)
                     /locus_tag="VFN38_04230"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 1 protein"
                     /protein_id="HET9010994.1"
                     /translation="MTARLRGPSPAHPTIALNCRFLEKETRGIGRYAQGLAAALRRSR
                     PGDVECLVSGLVAPHLEGAARLLNARRVTPLTGPVWEQTTLPAHLLTHGRPLLVNFVN
                     TAPLLYRRQVTVVYDLAYRRHPEMYSAAFLALYRAVIPRVVRRARIVTISEFVKSELV
                     AMGAPEDRVAVVPSFVAPELLALAAAEPPPSGEGDRYALIVGSLNARKNLRAALEAIR
                     AAAVSGLRVVVVGESATVFRALELDGAVDERVSFAGAVNDAELVRLYTGAHFLLFPSL
                     YEGFGMPPIEAMACGCPVIASSAASMPEVCGDAAYYCDPTSVADMARAIARVAGDAEL
                     RERLRARGRARAGRFTLERSAALFERTIEHALAAPSAGPSVMAQGVR"
     gene            1456..2226
                     /gene="rfbF"
                     /locus_tag="VFN38_04235"
     CDS             1456..2226
                     /gene="rfbF"
                     /locus_tag="VFN38_04235"
                     /EC_number="2.7.7.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018040698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047343 - glucose-1-phosphate
                     cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate cytidylyltransferase"
                     /protein_id="HET9010995.1"
                     /translation="MKVVLLAGGLGTRLAEETELKPKPMVEIGGMPILWHIMKHYAHH
                     GFSEFVVALGYKGEVIKRFFVDYCELNGSVTVDLGRGTVQKHETDSDEWTVHLVDTGK
                     DVLTGGRVRRLRRWLDDGTFRVTYGDGVSNVDLGDLLRFHRSQGKLATVTAVRPPARF
                     GGLEFEGGLVKHFVEKPQIGEGWINGGFLVFEPGIFEYLAGDESSLEVDLLERLAADR
                     ELAAYPHDGFWQCMDTLRDKNLLERLWKDGPPPWRTWD"
     gene            2228..3214
                     /locus_tag="VFN38_04240"
     CDS             2228..3214
                     /locus_tag="VFN38_04240"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HET9010996.1"
                     /translation="MSGDAFWRDRPVLVTGATGLLGSWLTRRLVDAGADVVCLVRDAV
                     PRSELHRNGAAARVVTVRGDVRDQPLLERTLGEYEIDTVMHLAAQTIVGVANRNPVST
                     FETNVGGTWTLLEACRRSPRVRQIVVASSDKAYGDQERLPYDESTPLEGRHPYDVSKS
                     CTDLIALTYAHTYALPVVTTRCGNFFGGGDLNWNRIVPGTVRSVVRGERPVIRSDGLY
                     VRDYFYVEDGAAAYMLLAERMASDPSLHGNAFNFSNEIQVTVLELVDRILRLMDTSLV
                     PEVRNEATHEIRHQYLSAAKARRMLGWSPLFDLDTGLSRTVQWYRDFLAADA"
BASE COUNT          501 a         1175 c         1166 g          460 t
ORIGIN      
        1 cgctccctga tcgtcggcga cacggcctcc ggcacgtaca cgttggtgaa gacgtccgcg
       61 ccgggataca gctcgcagag ggcctcgacg accttctcgc cgccccgcat ctcggtgagc
      121 cagtagtgga cgatggcgac cttcatcgga cgccctgcgc catgacggac gggccggcgg
      181 acggcgccgc cagcgcgtgc tcgatggtgc gctcgaagag cgccgccgag cgctccaggg
      241 taaatcgccc ggcacgcgcg cggccgcgcg cgcgcagccg ctcgcggagc tccgcgtcgc
      301 cggccactcg ggcgatcgcg cgcgccatgt cggccacgct cgtcgggtcg cagtagtacg
      361 ccgcgtcgcc gcagacctcc ggcatgctcg cggcgctcga cgcgatcacc ggacatccgc
      421 aggccatcgc ctcgatgggc ggcatgccga acccctcgta cagggagggg aagagcagga
      481 agtgcgcacc ggtgtagagc cgcaccagct cggcgtcgtt caccgcgccc gcgaagctca
      541 cccgctcgtc caccgcgccg tcgagctcga gggcgcggaa caccgtcgcg ctctccccca
      601 ccacgacgac gcgcagcccg gacaccgcgg ccgcgcgaat ggcctccagc gcggcgcgca
      661 ggttctttcg cgcgttcagc gacccgacga tcagcgcgta tcggtcgccc tcgccgctcg
      721 gcggcggctc cgccgcggcg agcgcgagca gctccggggc gacgaagctg gggaccacgg
      781 ccacgcgatc ctccggggcc cccatcgcca cgagctcgct cttgacgaac tcgctgatcg
      841 tgacgatccg cgcccgccgc acgacgcgcg ggatgacggc gcgatagagt gcgaggaagg
      901 cggcgctgta catctcggga tgtcgccggt aggcgaggtc gtacacgacg gtgacctgcc
      961 gccggtagag gagcggtgcg gtgttcacga agttcaccag cagcggccgg ccgtgcgtca
     1021 ggagatgcgc cgggagagtg gtctgttccc agacggggcc agtgagcggc gtgacgcggc
     1081 gcgcgttcag caggcgggcg gcgccctcga ggtgcggggc gaccagcccg gagacgaggc
     1141 actccacgtc gccggggcgc gagcgacgaa gggcagccgc gagcccctgc gcgtagcgcc
     1201 cgatcccgcg ggtctccttc tcgagaaagc gacagttgag cgcgatcgtc gggtgcgcgg
     1261 gcgagggacc gcggagtcgt gccgtcatcc ctgtgagaca accaccggtg gagaaagtca
     1321 cgtcgtcccg tccggcgggc gaccgggcgg tgttacgtta cactttggcg ggcagtcctc
     1381 ggggtgcgct ccggggccac gacgcgcgcc gcgctacgcc cagcgcctcg tcgctccatc
     1441 gcccaccacc acgagatgaa agtcgttctg ctcgccggcg ggctcggcac gcgcctcgcc
     1501 gaggaaacag agctgaagcc gaagccgatg gtggagatcg gcgggatgcc gatcctctgg
     1561 cacatcatga agcactacgc gcaccacggc ttcagcgagt tcgtcgtcgc cctgggctac
     1621 aagggcgagg tcatcaagcg cttcttcgtc gactactgcg agctgaacgg cagcgtcacc
     1681 gtcgacctcg gccggggcac ggtgcagaag cacgagacgg acagcgacga atggacggtg
     1741 cacctcgtgg acaccggcaa ggacgtcctc acgggggggc gcgtgcgtcg cctgcgccgc
     1801 tggctcgacg acgggacctt cagggtgacc tacggcgacg gcgtgtcgaa cgtcgatctc
     1861 ggcgacctgc tccgcttcca ccggtcgcag gggaagctgg ccaccgtcac cgcggtgcgg
     1921 ccgccggcgc gcttcggcgg gttggagttc gaaggcggcc tcgtgaagca cttcgtggag
     1981 aagccccaga tcggcgaggg atggatcaac gggggatttc tcgtgttcga gccggggatc
     2041 ttcgagtacc tcgcgggaga cgagagcagc ctggaagtgg accttttgga gcgcctcgcc
     2101 gccgaccggg agctcgccgc gtatccgcac gacggcttct ggcagtgcat ggacaccctg
     2161 cgcgacaaga acctcctgga gcggctctgg aaggacggcc cgccgccctg gcgcacgtgg
     2221 gactgagatg agcggcgacg ccttctggcg cgaccggccg gtcctggtca ccggggccac
     2281 cgggctgctc ggcagctggc tgacgcggcg gctcgtcgac gccggcgccg acgtcgtctg
     2341 cctggtgcgc gatgcggtgc cgaggtcgga gctccaccgc aacggcgccg cggcgcgggt
     2401 cgtcaccgtg cgcggcgacg tgcgcgacca gcccctcctc gagcgcacgc tcggcgagta
     2461 cgagatcgac accgtgatgc atctcgcggc ccagacgatc gtcggtgtcg ccaaccggaa
     2521 tcccgtctcc accttcgaga ccaacgtcgg cggcacctgg acgctgctcg aggcctgccg
     2581 ccggagtccg cgggtcaggc agatcgtcgt cgcgtcgtcg gacaaggcct acggggatca
     2641 ggagcggctt ccgtacgacg agtccacccc cctcgagggc cggcacccgt acgacgtgag
     2701 caagtcgtgc accgacctca tcgcgctcac ctacgcgcac acgtacgcgc tgccggtggt
     2761 gacgacccgc tgcggcaact tcttcggcgg cggagatctg aactggaacc gcatcgtgcc
     2821 gggcacggtg cgctccgtgg tgcgcggcga acgcccggtg atccgctccg acgggctgta
     2881 cgttcgcgac tacttctacg tcgaggacgg cgccgccgcc tacatgctcc tcgccgagcg
     2941 gatggcgtcc gacccgtcgc tgcacgggaa tgcgttcaac ttctccaacg agatccaggt
     3001 gacggtgctg gagctggtcg accggatcct gcggctcatg gacacctccc tggtgccgga
     3061 ggtgcgcaac gaggccaccc acgagatccg gcatcagtac ctgtccgccg ccaaggcgag
     3121 gcgcatgctc ggctggtcgc cgctgttcga tctcgacacg gggctctcgc gcaccgtcca
     3181 gtggtaccgg gacttcctgg cggcggacgc atgaccctcc ccctccccct gccgagctcg
     3241 gagcgccgca ccgcgcccgc ggcacccgcc gaggcggagc cgatcagcgc ctgccgcgcc
     3301 tc
//
LOCUS       DASSYW010000270         2811 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1066478, whole genome shotgun sequence.
ACCESSION   DASSYW010000270 DASSYW010000000
VERSION     DASSYW010000270.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2811)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2811)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2811
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1066478"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..215)
                     /locus_tag="VFN38_04245"
     CDS             complement(<1..215)
                     /locus_tag="VFN38_04245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010997.1"
                     /translation="MIVQAEADGERVKIAAKAEAEATFARMDAEARGNLSIMEKKAEG
                     LQKMVAAAGGNPDAAYRLLFLEQMPVVT"
     gene            214..525
                     /locus_tag="VFN38_04250"
     CDS             214..525
                     /locus_tag="VFN38_04250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9010998.1"
                     /translation="MRAFSAFAGAISNIKFDKVVLWNGASPNGAGGGVSSFVEDLVKV
                     LPPLMQVAEEIGGVQLPGIFGKRMQEATEAAAAEASAAAATLEVPVKASMTVQAKRAS
                     D"
     gene            604..1881
                     /locus_tag="VFN38_04255"
     CDS             604..1881
                     /locus_tag="VFN38_04255"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HET9010999.1"
                     /translation="MSRTSVRRIARVFALCLLAAPPAVAQRYALVNGRWFDGRRFVAR
                     TLYVERGTFTSRRPAAVDSTIDLAGRFVVPPFGEAHNHNIEGAPAATVKAYLDAGIFY
                     VKDPCSFPEAKRNAVGTLNTPLTVDAVFAGGCITGPDGHPVGLARRNIARGTWKADDG
                     DGRFLHAVADSADFERRWPAILRAGPDFIKTILVYSEEHARRRDDPRFVNWHGLDPAL
                     LPLVVRRAHSAGLRVSSHIESAADFHRALTAGVDEINHLPGFRPEGDSVGGYRGDLAR
                     YRIAPADARYAARNGVVVVTTIGEILDYLAMGDSSGLDAPARARVRALHAANLRLLRS
                     SGVRVVLGSDRFRSNTVSEALALRSLGVFSDAELLAMWSMATPRAIFPGRRVGCLDAG
                     CEASFLALHGDPLADFANVGRIALRMKQGVLLR"
     gene            1899..2117
                     /locus_tag="VFN38_04260"
     CDS             1899..2117
                     /locus_tag="VFN38_04260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011000.1"
                     /translation="MDVNDIVHVVVEGEGVNTLYLKDGRIARVSTLSGKVMSVVRLPS
                     DDALQDSERKSTARRSRAVIAGSHYDVD"
     gene            complement(2126..>2811)
                     /locus_tag="VFN38_04265"
     CDS             complement(2126..>2811)
                     /locus_tag="VFN38_04265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HET9011001.1"
                     /translation="IAAGIGAFSPRRLPQACTEPWYGRGIFDVVTDPQDYKGQRVVIV
                     GGGDSAFDWATQLRGVAAHVSLVHRSDRFRAHGATVTQFEEDVKAGRASMFTFHEIAD
                     VLCRSEGERFTHIVLKQVKTKATTEIEADVVLPMLGFVSDIGPIADWGLTLQKDEIVV
                     NQLMETGRPGIWAAGDVTTYPGKLKLIACGFGEAATAVNQAVHWMYPEKKVAPGHSSN
                     MAVFGQTDD"
BASE COUNT          396 a         1031 c          950 g          434 t
ORIGIN      
        1 gtgaccaccg gcatctgctc gaggaagagc agccggtagg ccgcatcggg attgccgccg
       61 gcggcagcga ccatcttctg cagtccttcc gccttcttct ccatgatcga gagattgccg
      121 cgggcctcgg cgtccatgcg cgcgaaggtc gcctcggcct ccgccttcgc ggcgatcttc
      181 acccgctcgc cgtcggcctc ggcctgcacg atcatgcgcg ccttctcggc cttcgccggc
      241 gccatctcga acatcaagtt cgacaaggtg gtgctgtgga acggggcgag cccgaacggc
      301 gccggcggcg gcgtgagcag cttcgtggaa gatctggtga aggtcctgcc gcctctcatg
      361 caggtggcgg aggagatcgg cggagttcag ctgcccggca tcttcggaaa gcgcatgcag
      421 gaagccaccg aagccgcggc ggccgaagcg agcgccgcgg ccgcgacgct cgaggtgccc
      481 gtgaaggcat cgatgacggt gcaggcgaag cgcgcgagcg actgatcggc gattgcacga
      541 cgaggccgcc acgcgtgcgt gaggcctcgt cgccccctcc ctttccgacc acctcgcgtc
      601 gccatgtcac gcacctccgt acgccgcatc gcccgggtgt tcgccctctg cctgctcgcc
      661 gcgccccccg cggtggcgca gcgatacgcg ctcgtgaacg gccgctggtt cgacggccgg
      721 cgtttcgtcg cgcgcacgct gtacgtggag cgcggcacct tcaccagccg gcgcccggcg
      781 gcggtcgatt ccacgatcga tctcgcgggc cgcttcgtcg tcccgccgtt cggggaggcg
      841 cacaaccaca acatcgaagg cgcccccgcc gccaccgtga aggcgtatct cgacgcgggg
      901 atcttctacg tgaaggatcc gtgcagcttc cccgaggcga agcggaacgc ggtgggcacg
      961 ctgaacacac ccctcaccgt ggacgccgtg ttcgccggcg gctgcatcac cggcccggat
     1021 ggccacccgg tgggcctggc gcgccgcaac atcgcccgcg gcacctggaa ggcggacgac
     1081 ggcgacggcc ggttccttca cgccgtcgcc gactccgccg acttcgagcg ccgctggccc
     1141 gccatcctgc gcgccggccc cgacttcatc aagacgatcc tcgtctactc ggaggagcac
     1201 gcgcggcggc gcgacgaccc gcggttcgtc aactggcacg gcctcgaccc cgcgctgctg
     1261 ccgctggtcg tgcggcgcgc acactcggcc ggcctgcggg tgtcgtcgca catcgagtcc
     1321 gccgcggact tccaccgcgc gctcacggcg ggcgtggacg agatcaacca tctccccggc
     1381 ttccgtccgg aaggtgactc cgtcggcggt taccggggcg atctcgcgcg ctaccggatc
     1441 gcgccggccg acgcccgcta cgccgcgcgg aacggcgtgg tcgtcgtgac gacgatcggg
     1501 gagatcctcg actacctcgc gatgggcgat tcgtcggggc tcgacgcgcc ggcgcgcgcg
     1561 cgcgtgcgcg ccctgcacgc cgccaacctc cggctcctgc gctccagcgg cgtccgcgtc
     1621 gtgctcggca gcgatcgctt ccggtcgaac accgtgagcg aggcgctggc gctgcgctcg
     1681 ctaggtgtgt tcagcgacgc cgagctgctc gcgatgtggt ccatggccac gccgcgtgcc
     1741 atctttccgg ggcgccgcgt cggctgcctg gacgcggggt gcgaggcgag cttcctcgct
     1801 ctccacggag atccgctcgc ggacttcgcc aacgtcgggc ggatcgcgct gcgcatgaag
     1861 cagggagtgc tgttacgctg accgcaccgg aggccaccat ggacgtcaac gacatcgtgc
     1921 acgtcgtcgt cgagggcgag ggcgtcaaca ccctctacct caaggacgga cgcatcgctc
     1981 gcgtcagcac cctgagcggc aaggtgatga gcgtcgtccg cctgccgagc gacgacgccc
     2041 tccaggattc cgagcgcaag tccacggccc gtcgcagccg ggccgtgatc gccggctcgc
     2101 actacgacgt cgactaggga ccgccctagt cgtcggtctg gccgaacacg gccatgttgc
     2161 tcgagtggcc cggggcgacc ttcttctccg ggtacatcca gtgcaccgcc tggttcacgg
     2221 cggtggccgc ttcgccgaag ccgcaggcga tcagcttgag cttccccggg taggtggtca
     2281 cgtcgcccgc cgcccagatc cccggccggc ccgtctccat gagctgattg acgacgatct
     2341 cgtccttctg gagggtgagg ccccaatcgg cgatcggacc gatgtcgctc acgaagccga
     2401 gcatcggcag cacgacgtcg gcctcgatct cggtggtcgc cttggtcttc acctgcttga
     2461 gcacgatgtg ggtgaagcgc tccccctccg accggcagag gacgtcggcg atctcgtgga
     2521 aggtgaacat ggatgcgcga ccagccttca cgtcctcctc gaactgcgtc accgtggccc
     2581 cgtgcgcgcg gaagcgatcg ctgcggtgga ccagcgagac gtgcgccgcc acgccgcgga
     2641 gctgggtggc ccagtcgaac gccgaatcgc cgccgcccac gatcacgacg cgctgcccct
     2701 tgtagtcctg cgggtcggtg acgacgtcga agatgccgcg cccgtaccag ggctccgtgc
     2761 acgcctgcgg cagccgccgc ggcgagaagg cgccgatccc cgccgcgatg a
//
LOCUS       DASSYW010000271         2820 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1703185, whole genome shotgun sequence.
ACCESSION   DASSYW010000271 DASSYW010000000
VERSION     DASSYW010000271.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2820)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2820)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2820
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1703185"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..481)
                     /locus_tag="VFN38_04270"
     CDS             complement(<1..481)
                     /locus_tag="VFN38_04270"
                     /EC_number="4.1.1.31"
                     /inference="COORDINATES: protein motif:HMM:NF012532.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008964 - phosphoenolpyruvate carboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA];
                     GO_process: GO:0015977 - carbon fixation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxylase"
                     /protein_id="HET9011002.1"
                     /translation="MPGDLPVTGASATPLSGPSVRREDVALHDDVRWLAAALGRVIRQ
                     QEGERAFEAVEGLRASCRARRHGEPDALSLEALLAHVAELPLELCAVTARSFTLFFLL
                     INTAEQVHRVRRTRAYRTDESDDPQPASARWAMRRLKEEQRGANEVAQAVGRLDVRPV
                     "
     gene            570..758
                     /locus_tag="VFN38_04275"
     CDS             570..758
                     /locus_tag="VFN38_04275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011003.1"
                     /translation="MTERPPPDESLHEDGAAREPDAAGPPPPGESCDWCGSADLWWRN
                     CKLLCRNCGAIVKSCADL"
     gene            complement(793..1389)
                     /locus_tag="VFN38_04280"
     CDS             complement(793..1389)
                     /locus_tag="VFN38_04280"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HET9011004.1"
                     /translation="MTIRAGEGAPRRNRPVLRTFGRTALALVRWRIVGRVPDQPKFVA
                     IVAPHTSNWDFPLGVLVMFALDLKVHWFGKDTLFRTPLGPLFRLLGGRPVNRAVPEGV
                     VDEMAAVVRAEPRFILALAPEGTRKRVARWRTGFYHLAERADIPILPVSFDWAKREVT
                     LGTLMRPTGDIAADFALLQGKFRREMARHPAAFWDEAS"
     gene            complement(1481..2140)
                     /locus_tag="VFN38_04285"
     CDS             complement(1481..2140)
                     /locus_tag="VFN38_04285"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HET9011005.1"
                     /translation="MTKIRVVLVDDHAIVRAGLKAVLGADPDIEVVGEASGGAEAIAL
                     VARTPTDVVVMDISMVDGDGITATRVITGGGANSPRVLVLTMHAEEAYLEKVLDAGAS
                     GYLTKGTADRELVQAVRTVARGETYVRPTAARVLARGARRREEAATDRARFERLTDRE
                     RAVMQLIAEGYTAPEIGEQLTISPKTVDTYKQRINEKLGLTHRADYVKLALKLGLLQT
                     P"
     gene            complement(2155..>2820)
                     /locus_tag="VFN38_04290"
     CDS             complement(2155..>2820)
                     /locus_tag="VFN38_04290"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HET9011006.1"
                     /translation="RLTEDRARVRRLAAQVISAQDEERARVARELHDSTAQILTAVML
                     QLGVAARETESPVLSERIATLRELAAEALEEVRTLSHTMHPRILDDLGLAAALEWLSR
                     QTRSQTSLEVEVNATADDAMIPAPLASVLYRVAQEALRNAVRHSDARRIDIRLRNEPG
                     VAVLEVEDDGHGFDVKSAEERRPGMGLFSMRERVGLVNGRLAVTSEYDRGTRVVATVP
                     LTN"
BASE COUNT          362 a         1062 c         1013 g          383 t
ORIGIN      
        1 gcaccggccg cacgtcgagc cgtccgaccg cttgcgcgac ctcgttcgcg ccgcgctgct
       61 cctccttcag ccggcgcatc gcccagcggg ccgacgcggg ctgcgggtcg tcgctctcgt
      121 cggtacggta ggcgcgcgtg cgccgcacgc ggtgcacctg ctccgccgtg ttgatgagga
      181 ggaagaacag ggtgaacgag cgcgccgtca ccgcgcagag ctccagcggc agctcggcca
      241 cgtgggcgag cagcgcctcg agcgagagcg cgtcgggctc gccgtggcgg cgcgcgcggc
      301 agctcgcgcg cagcccctcc accgcctcga aggcgcgctc tccctcctgc tgccggatca
      361 cgcggcccag cgcggccgcc agccagcgga cgtcgtcgtg cagcgccacg tcctcgcgcc
      421 gcacgctggg cccggagagc ggggtggcgg atgcgccggt gacggggagg tcgcctggca
      481 aggtcgatgg gcgtggcgga gcggacactc ctcgaacatc ctcagggggg agccagccgg
      541 caaccctcac atcgccgcgg ggagcgcgca tgaccgaacg accaccgccc gacgagtcgc
      601 tgcacgagga cggggccgct cgcgagcccg acgcggcggg ccccccgccg ccgggtgagt
      661 cgtgcgactg gtgcggctcc gccgacctgt ggtggcgcaa ctgcaagctg ctctgccgca
      721 actgcggcgc gatcgtgaag agctgcgccg acctctgacg ccccccggtc tacgcgcgcc
      781 gcggccgccg cgtcacgacg cctcgtccca gaaggcggcc gggtggcggg ccatctcgcg
      841 acggaacttc ccctggagca gggcgaagtc ggcggcgatg tcgccggtgg ggcgcatcag
      901 cgtgccgagg gtcacctcgc gcttcgccca gtcgaagctc accggcagga tggggatgtc
      961 ggcccgctcg gcgaggtggt agaagccggt gcgccagcgc gccacccgct tccgggtgcc
     1021 ctccggcgcg agcgccagga tgaagcgcgg ctcggcgcgg acgaccgcgg ccatctcgtc
     1081 caccacgccc tccggcacgg cgcggttcac cgggcgcccg cccagcaggc ggaagagcgg
     1141 gccgagcggc gtgcggaaga gcgtgtcctt gccgaaccag tgcaccttga ggtccagcgc
     1201 gaacatcacg agcacgccca gcgggaagtc ccagttcgac gtgtgcggcg cgacgatggc
     1261 gacgaacttc ggctggtcgg gcacccggcc gacgatgcgc cagcgtacca gcgccagcgc
     1321 ggtgcgcccg aaggtccgga gcaccggccg gttgcgccgc ggcgcgccct cacccgcgcg
     1381 aatcgtcatg ggggaaagca ggagcggggg gagcgctttc gcagtccccc ctcgccgtcg
     1441 gccggctggc tcacggaggc ccggacacgc gcgcccgacg tcacggcgtc tgtagcagcc
     1501 cgagcttgag cgcgagcttc acgtagtcgg cgcggtgggt caggcccagc ttttcgttga
     1561 tccgctgctt gtaggtgtcc accgtcttcg ggctgatcgt gagctgctcg ccgatctccg
     1621 gcgcggtgta gccctcggcg atgagctgca tcaccgcccg ctcgcggtcg gtgagccgct
     1681 cgaagcgcgc ccggtcggtg gcggcttcct cgcgccggcg cgcgccgcgg gcgagcactc
     1741 gcgccgccgt ggggcgcacg taggtctcgc cgcgtgccac ggtgcggacc gcctgcacca
     1801 gctcgcggtc ggcggtgccc ttcgtgagat agcccgacgc acccgcgtcc agcaccttct
     1861 cgagatacgc ctcctcggcg tgcatggtga gcaccagcac gcgcgggctg ttcgcgccgc
     1921 cgcccgtgat cacgcgcgtg gccgtgatcc cgtcaccgtc caccatcgag atgtccatca
     1981 cgacgacgtc ggtcggggtg cgggcgacca gcgcgatcgc ctcggccccg cccgatgcct
     2041 cgccgacgac ctcgatgtcg ggatcggccc ccagcaccgc cttcagcccg gcgcgcacga
     2101 tggcgtgatc gtccacgagc acgactcgta tcttcgtcat cgccggtggg atcctcaatt
     2161 cgtgagcggc acggtggcca cgacgcgcgt gccgcggtcg tactcgctcg tgacggccag
     2221 ccggccgttc acgagtccga cccgctcccg catgctgaac agccccatgc cggggcggcg
     2281 ctcctcggcg ctcttcacgt cgaagccgtg tccgtcgtcc tccacctcca gcaccgccac
     2341 ccccggctcg ttccgcagcc ggatgtcgat gcgacgggcg tcggagtgac gcaccgcgtt
     2401 gcgcagcgcc tcctgcgcca cccgatacag caccgaggcg aggggtgccg ggatcatcgc
     2461 gtcgtcggcc gtggcgttca cctccacctc gagcgacgtc tggcttctcg tctgccggga
     2521 cagccactcc agcgccgcgg cgaggccgag gtcgtcgagg atgcgcgggt gcatggtgtg
     2581 cgagagggtg cgcacctcct ccagcgcctc cgccgcgagc tcgcgcaggg tggcgatgcg
     2641 ctcggagagc accggcgact cggtctcgcg cgccgccacc ccgagctgga gcatcaccgc
     2701 cgtgaggatc tgcgccgtgg aatcgtgcag ctcgcgcgcg acgcgcgccc gctcctcgtc
     2761 ctgcgcgctg atcacctgcg cggcgagccg ccggacgcgc gcccggtcct cggtgaggcg
//
LOCUS       DASSYW010000272         4196 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_46821, whole genome shotgun sequence.
ACCESSION   DASSYW010000272 DASSYW010000000
VERSION     DASSYW010000272.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4196)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4196)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4196
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_46821"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..655)
                     /locus_tag="VFN38_04295"
     CDS             complement(<1..655)
                     /locus_tag="VFN38_04295"
                     /inference="COORDINATES: protein motif:HMM:NF016024.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rad52/Rad22 family DNA repair protein"
                     /protein_id="HET9011007.1"
                     /translation="MIARHETQLDRIDIWSALAAPLPSGVISWRQDGRTITRDGRYIA
                     RFVAYIEANTVRERLDRVVPGEWDLTLELLPPVAGLDEDANQGACSFKARLQILGVIR
                     EDVGTGKDYKQAATDAFKRAAVRFGIAHELYSYEQNWVQMDGDGKFARPVEDPAVAYA
                     RRYGQPRAGGAGGAPHSVTRADQAAAAAPETGSAFASDSLLDTARTTDEPSCPKCGGR
                     "
     gene            complement(700..1008)
                     /locus_tag="VFN38_04300"
     CDS             complement(700..1008)
                     /locus_tag="VFN38_04300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011008.1"
                     /translation="MAKATMKAGAKGGPKGKVKVKKGRPGVPAPVARMVVRELDPQRK
                     CGTGTSVQFLYRVDESVDGRATAHLVFFDRHGWYCEHGRTCPAVAHAKRHNGRIARVS
                     "
     gene            1188..1700
                     /locus_tag="VFN38_04305"
     CDS             1188..1700
                     /locus_tag="VFN38_04305"
                     /inference="COORDINATES: protein motif:HMM:NF024949.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HET9011009.1"
                     /translation="MSTELANDPLLVEGFPELTQLGKRLEILRIERGVSKQRLARHAG
                     TSRQQLWRVMTGKSELTSSLRERLALALAVEPGSLSGEPRGSVTLGGSGSPFAFTPAL
                     PSVAPSVSEYLVDVRHVAATIRTLPSGDGGRRLKRALLNAVEDLALEAGQALPIDYSE
                     IRRRVLAGEL"
     gene            1821..2816
                     /locus_tag="VFN38_04310"
     CDS             1821..2816
                     /locus_tag="VFN38_04310"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HET9011010.1"
                     /translation="MTDVVALAAELLALQSSTGSEGPAVDFVSRWLVSRGWNVTTQEV
                     SKGRANVWASRAGGGVTFSTHLDTVPPYLPPRMEGNRLYGRGACDAKGIAAAMMCAAE
                     RLTAAGEQRIDLLLVVGEEKGSDGARAANHLPATSRFLVNGEPTESRLASGAKGSQRV
                     VVRTRGRAAHSAYAELGISAIEPMLALLPTVKSLPLPTDPILGETTVNIGTIRGGTEA
                     NIIPALCESELMFRLVSDVTPLREAVTRWANGKAELEWGSYIPAQHFHTIPGFEVAPV
                     AYTSDIPLLSRWGTPLLFGPGSIHVAHTTEEFIDVDELRSAVDAYERIARTVLAA"
     gene            2813..3886
                     /gene="asd"
                     /locus_tag="VFN38_04315"
     CDS             2813..3886
                     /gene="asd"
                     /locus_tag="VFN38_04315"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004073 - aspartate-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HET9011011.1"
                     /translation="MTPRAPKSRIPVAVLGATGAVGQTFIRLLADHPWFELAELAASE
                     RSAGRPYAEAARWIGDAMPERVRDMTVRPCDPRQVTAPLVFSALDSSVAGEVELAFAR
                     AGRLVLSNAKNYRMDDDVPLVIPEVNADHLALLEVQRAKRGWSGGIVTNANCASIMAV
                     MALAPLHEAFGVSRLFVATMQAVSGAGYPGVPSLDILGNVIPFIKDEEAKIETEICKM
                     LGRRGETRIESADIRISAHANRVPVENGHTVCLSVDFGTHVSADAALEVLREWRGDPS
                     ARDLPSSPARPLVVTDLPDRPQPRRDVDSGRGMTVTVGRVRTDPLFDVKLVAMGHNTI
                     RGAAGASVLNAELLVSTGQAGAA"
     gene            3883..>4196
                     /locus_tag="VFN38_04320"
     CDS             3883..>4196
                     /locus_tag="VFN38_04320"
                     /inference="COORDINATES: protein motif:HMM:NF012899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011012.1"
                     /translation="MIVCKFGGTSVGDADAIARTARIIEGRRDRHPVVVVSALGGTTN
                     QLLQVAEQAAKGQLIGALRAVEGLRDRHLAQTQRLLAGADADEVCNELSAMFDELAAL
                     AEA"
BASE COUNT          574 a         1526 c         1435 g          661 t
ORIGIN      
        1 cgcggccccc gcacttggga cagctcggtt cgtccgtggt gcgcgcggta tccagcagcg
       61 aatccgacgc gaaggcgctc cccgtctccg gggcggccgc ggcagcctgg tcggcgcggg
      121 tcaccgagtg cggcgcccca cccgcgccgc ccgcgcgggg ctggccgtag cgtcgcgcgt
      181 acgccacggc tggatcctcg acggggcgtg cgaactttcc gtcgccgtcc atctgcaccc
      241 agttctgttc gtacgaatac agctcgtgcg cgatcccgaa ccgcaccgcg gcgcgcttga
      301 acgcgtcggt ggccgcctgc ttgtagtcct tgcccgtgcc gacgtcctcg cgaatgacgc
      361 cgaggatctg gaggcgcgcc ttgaaggagc acgccccctg gttcgcgtcc tcgtcgagcc
      421 cggccacggg gggcagcagc tccagcgtga ggtcccactc gcccggcacc acccggtcga
      481 gccgctcgcg cacggtgttc gcttcgatgt acgcgacgaa ccgcgcgatg tagcggccat
      541 cgcgggtgat ggtccggccg tcctggcgcc aggagatgac gccggaaggg aggggggcgg
      601 ccagcgccga ccagatgtcg atcctgtcca gttgggtctc gtgtctcgcg atcatgtctc
      661 tcatcctgcc gttgcgttgt cagtccggtg cgagatccct caggagactc gcgcgatgcg
      721 cccgttgtgc cgtttcgcgt gcgcgaccgc cgggcatgta cggccgtgct cgcagtacca
      781 tccgtgtctg tcgaagaaca ccaggtgggc cgtggctcgc ccgtcgaccg attcgtccac
      841 gcgatagagg aactggaccg acgtccccgt accgcacttc cgctgtggat ccagctcccg
      901 caccaccatt cgagcgaccg gagcgggaac gcccggccgc cctttcttca ccttcacctt
      961 ccccttcggg ccccccttcg cacccgcctt catggtggcc ttggccacgc cccccttgga
     1021 ccgagcaccg gaagcgcgca ccttcgcctt gcccgtcctc gggttacgaa cgcccgtaag
     1081 tgcagccctt ttcttgactt tcgccacctc ggctcctaga ctgcgcaacg gacgtcgctc
     1141 ggtttcggtg tattttcggt cctgcaatct agggaattcg gcaacgtatg tcaacggaat
     1201 tggcgaacga tccgctcctg gtcgaagggt ttcccgagct cacccagctc ggcaagcggc
     1261 tggagatcct gcgcatcgag cgcggcgtct ccaagcagcg gctcgcccgt catgccggta
     1321 cgtcgcggca acagctctgg cgagtcatga cgggcaagtc agagctcacg agctcgcttc
     1381 gtgagcggct cgcgctcgcc ctggcggtgg agcccggaag cctttccggc gagccgcgcg
     1441 gatcggtgac cctcgggggt tcggggtcgc cattcgcgtt cacccccgcg ttgccgagcg
     1501 tcgcgccctc cgtgtccgag tatctggtgg acgtgcggca tgtggcggcc accattcgga
     1561 ccctgccgtc cggcgacggc ggccggcggc tcaagcgcgc gctgctcaac gcggtcgagg
     1621 atctcgcgct ggaggcggga caggcgctgc cgatcgacta ttcggagatc cgccgccgcg
     1681 tgcttgccgg cgagctgtag ccgcacgagg ccgcgtcgct cgggacgatc cgaagggcac
     1741 accgccaggc gcgcggtgtg tccttcgccg tttccggact cgtcctccca tcctcccgtc
     1801 atcccggcta ctttccgccc atgaccgacg tcgtagcgct cgccgcggag ctcctcgccc
     1861 tgcagtcgtc caccggctcg gaagggccgg ccgtggattt cgtgtcacgc tggctcgtgt
     1921 cgcgcgggtg gaacgtcacc acccaggaag tctccaaggg gcgcgccaac gtgtgggcat
     1981 cgcgcgcggg gggcggagtc accttctcga cgcacctgga caccgtgccg ccgtacctgc
     2041 cgccgcgcat ggagggcaac cggctctacg gccgcggggc gtgcgatgcc aagggaatcg
     2101 ccgcggcgat gatgtgcgcg gcggagcgcc tcaccgccgc cggcgagcag cggatcgacc
     2161 tgctgctggt ggtgggcgag gagaaggggt cggacggcgc gcgcgcggcc aaccatcttc
     2221 ccgccacgag ccgcttcctg gtgaacggcg agcccaccga gagcaggctc gcctccggcg
     2281 ccaaggggtc gcagcgcgtc gtggtgcgga cgcgcggccg cgccgcgcac tcggcgtacg
     2341 cggagctggg tatttccgcc atcgagccga tgctcgcgct cctgcccacc gtcaagtcgc
     2401 tgccgctgcc caccgacccg atcctcggcg agaccacggt gaacatcggg acgatccgcg
     2461 gcggcaccga agccaacatc attcccgcgc tctgcgagtc cgagctgatg ttccggctgg
     2521 tgagcgacgt cacccccctg cgcgaggcgg tcacccgctg ggcgaatggc aaggcggagc
     2581 tcgagtgggg ctcgtacatc cccgcgcagc acttccacac cattcccggc ttcgaggtcg
     2641 ctcccgtggc gtacacctcg gacatccccc tgctcagccg ctggggaacc cctctcctgt
     2701 tcggaccggg ctccatccat gtggctcaca ccacggagga gttcatcgac gtggacgagc
     2761 tgcggagcgc ggtggacgcg tacgagcgga tcgcccgcac ggtgctggcc gcgtgacgcc
     2821 gcgcgcgccg aagtcccgca tcccggtggc cgtgctgggc gcgaccggtg cggtggggca
     2881 gacgttcatc cgcctgctgg ccgatcatcc ctggttcgag ctcgccgagc tggccgcctc
     2941 cgagcgctcg gcggggcggc cgtacgccga ggccgcgcgc tggatcggcg acgcgatgcc
     3001 cgagcgggta cgggacatga cggtccgccc ctgcgatccc cgccaggtca ccgcgccgct
     3061 ggtgttctcg gcgctcgact cgtccgttgc cggcgaggtg gagcttgcct tcgcgcgggc
     3121 cggacggctc gtgctcagca acgcgaagaa ctaccgcatg gacgacgacg tgccgctcgt
     3181 gatcccggaa gtgaacgcgg atcacctcgc gctgctcgag gtccagcgtg ccaagcgtgg
     3241 ctggagtggc ggcatcgtca ccaacgccaa ctgcgcctcg atcatggcgg tgatggcgct
     3301 cgcgccgctg cacgaggcgt tcggcgtcag ccggctgttc gtcgccacca tgcaggccgt
     3361 ctccggcgcc ggctatcccg gcgtgccgtc gctcgacatc ctcggcaacg tcatcccgtt
     3421 catcaaggac gaggaggcca agatcgagac ggagatctgc aagatgctcg gccgccgcgg
     3481 cgagacccgc atcgaatccg ccgacatccg gatcagcgcg cacgcgaacc gggtccccgt
     3541 ggagaacggc cacaccgtgt gcctctcggt ggatttcggc acgcacgtga gcgcggacgc
     3601 ggcgctcgag gtgctgcgcg aatggcgcgg cgaccccagc gcgcgcgacc ttcccagctc
     3661 gccggcgcgc cccctcgtcg tcaccgacct gcccgatcgc ccgcagccgc gccgcgacgt
     3721 cgacagcggc cgcggcatga cggtgaccgt cgggcgcgtg cgcaccgatc cgctgttcga
     3781 cgtgaagctc gtcgcgatgg gccacaacac gatccgcggc gctgccggcg cctccgtcct
     3841 gaacgccgag ctgctcgtgt ccaccggcca ggcgggcgcc gcgtgatcgt ctgcaagttc
     3901 ggcggcacct ccgtgggcga cgccgacgcg atcgcgcgca ccgcgaggat catcgaggga
     3961 cggcgcgacc gccaccccgt ggtggtggtg agcgcgctcg gcggcacgac caaccagctt
     4021 ctccaggtgg cggagcaggc ggccaagggc cagctcatcg gcgcgctgcg cgcggtggag
     4081 gggctgcgcg atcgccatct cgcgcagacg cagcgcctgc tcgccggcgc cgatgcggac
     4141 gaggtgtgca acgagctgtc cgccatgttc gacgagctgg ccgcgctcgc cgaggc
//
LOCUS       DASSYW010000273         2529 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_722806, whole genome shotgun sequence.
ACCESSION   DASSYW010000273 DASSYW010000000
VERSION     DASSYW010000273.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2529)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2529)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2529
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_722806"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..217
                     /locus_tag="VFN38_04325"
     CDS             <1..217
                     /locus_tag="VFN38_04325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011013.1"
                     /translation="AGRTAASVLWAVARTSPDSLVVRGAAFDDRFGRPGMRAALLRGD
                     DPDAVVAADDAAVEAWRRELAPYRLYR"
     gene            327..671
                     /locus_tag="VFN38_04330"
     CDS             327..671
                     /locus_tag="VFN38_04330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011014.1"
                     /translation="MRIPSKAPLLALFLAVATACGPRQVEVRTAPTTASEQAVQITNN
                     LSQAVNVYVSASGSGEMFLRQIPANTVEKVPVQGVPSGTTVTFKAVTVDGARTYQSRN
                     VGLTGLFVWSVP"
     gene            837..1541
                     /locus_tag="VFN38_04335"
     CDS             837..1541
                     /locus_tag="VFN38_04335"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: protein motif:HMM:NF013250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HET9011015.1"
                     /translation="MKLLPDWIKDGYLRLIDPVANWLVKRGVHPNTITVVGTLCTVVG
                     GIIYGTGHIRTGGVFLGVTALFDVLDGTVARRSNKSSMFGAFLDSTLDRLADGFVLGG
                     IAVFYATSRVHGSVPLMITALLGLVGAFLTSYTRARAESLGLDAKVGLLQRPERVVLL
                     SAPQALFGLVLNGWVLAIIIVILTVTAWITVIQRVAYVYTATTRADEAEARTESEVRP
                     RFWSRSRAPRPLLKGE"
     gene            1546..>2529
                     /locus_tag="VFN38_04340"
     CDS             1546..>2529
                     /locus_tag="VFN38_04340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol-3-phosphate synthase"
                     /protein_id="HET9011016.1"
                     /translation="MKGSAKDASSTPKPATGRLGIITPGLGAVATTFMAGVESIRQGR
                     SKPIGSLTQMATIRLGKRTENRTPLIKDFVPLADLKDIVFGAWDPIADDAYTAAKKAG
                     VLEERDLAPLKDFLSAIKPMPAVFENKYVTRINGTNVKKGKTKRDLAEQLRQDIRDFK
                     AKNKCDRVVIVWCASTEIFIKPGPQHATLEQFERAMENNDEAIAPSMLYAYAAIMEGV
                     PFCNGAPNLSVDLPALVQLATERGVPISGKDFKTGQTWMKTIIAPGLKARMLGLAGWY
                     STNILGNRDGEVLDDPESFKSKEVSKLGALEHILQPHLYPELYGSMHHVVRI"
BASE COUNT          401 a          883 c          856 g          389 t
ORIGIN      
        1 tgccggccgg accgcggcgt cggtgctgtg ggcggtcgcc cgcacgtcgc cggactccct
       61 ggtcgtgcgc ggtgcggcct tcgacgaccg gttcggccgg ccggggatgc gcgccgcgct
      121 cctccgcggc gacgacccgg acgcggtcgt ggcggcggac gacgccgcgg tggaggcgtg
      181 gcggcgcgag ctggcgccgt atcggctcta tagatagcgt ggagccagga tgcgcggcgc
      241 tggcggacgc ggcggcgcgc atgtgtcttg caacacgggg cggcgaccgt gcgccccttc
      301 ccgatcacga ccgaggagcc gttcccatga gaataccatc gaaagccccg ctgctcgcgc
      361 tgttcctcgc cgtggcgacg gcgtgcgggc cgcgccaggt cgaggtgcgc accgcgccga
      421 cgaccgcgag cgagcaggcg gtgcagatca cgaacaacct gagccaggcc gtcaacgtct
      481 acgtctcggc gtccggcagc ggcgagatgt tcctgcgtca gattccggcg aacacggtgg
      541 agaaggtgcc ggtgcagggc gtcccgagtg gcacgacggt gacattcaag gcggtgacgg
      601 tggacggcgc gcgcacgtac cagagccgga atgtcggact caccggcctg ttcgtgtggt
      661 cggtgccctg aaccgtcgcg ccacgcgggc gaccgcgctg gttgctggac ggcggcaccc
      721 cgaatagctt ttacgggccg gagcgcatgc ttcggcccgt tgccgctttc gccccccgac
      781 atcgtcaccg ccgctcgacc gtccggccgc gggacttccg tgcgcctcgg agccgcatga
      841 agcttctgcc cgactggatc aaagacggtt atctgcggct catcgacccg gtggcgaact
      901 ggctggtgaa gcgcggcgtg catccgaaca ccatcacggt cgtcggcacg ctgtgcaccg
      961 tggtcggcgg gatcatctac ggcacggggc acatccggac cgggggcgtg ttcctcgggg
     1021 tcaccgccct gttcgacgtc ctggacggca cggtggcgcg gcgctccaac aagagctcga
     1081 tgttcggcgc cttccttgac tcgacgctgg accgcctggc ggacggcttc gtgctcggag
     1141 ggatcgcggt cttctacgcc accagccgcg tccacggcag cgtcccgctc atgatcacgg
     1201 cgctgctcgg tctcgtcggt gcctttctca cctcgtacac ccgggcccgc gccgagtcgc
     1261 tcggactcga cgcgaaagtc ggcctgctgc agcgccccga gcgcgtcgtc ctcctgtcag
     1321 cgccccaggc gctcttcggc ctcgtgctga acgggtgggt gctcgccatc atcatcgtca
     1381 ttctgaccgt tacggcctgg atcaccgtga tccagcgcgt ggcgtacgtg tacaccgcca
     1441 ccacgcgagc ggacgaagcg gaagcgcgca ccgagagcga ggttcgtccc cgcttctggt
     1501 cgcgcagccg cgcgccgcgc cctctgctca aaggagaata ggttcgtgaa aggttccgcc
     1561 aaggacgctt cctccacgcc caagcccgcc accggccggc tcggcatcat cacccccggt
     1621 ctcggtgccg tcgcgacgac cttcatggcc ggcgtcgaga gcatccgtca ggggcgcagc
     1681 aagccgatcg gctcgctcac ccagatggcc accatccgcc tcggcaagcg caccgagaac
     1741 cgcacgcccc tgatcaagga cttcgtcccc ctcgccgacc tgaaggacat cgtcttcggc
     1801 gcgtgggatc cgatcgccga cgacgcgtac accgccgcca agaaggcggg ggtgctggag
     1861 gagcgggacc tcgcgccgct gaaggacttc ctgtcggcca tcaagccgat gccggcggtg
     1921 ttcgagaaca agtacgtcac gcgcatcaac ggcacgaacg tcaagaaggg caagaccaag
     1981 cgcgatctcg ccgagcagct gcgtcaggac atccgcgact tcaaggcgaa gaacaagtgc
     2041 gaccgcgtcg tcatcgtgtg gtgcgcgtcc accgagatct tcatcaagcc cggcccgcag
     2101 cacgcgacgc tcgagcagtt cgagcgcgcg atggagaaca acgacgaggc gatcgccccg
     2161 tccatgctct acgcgtacgc ggcgatcatg gagggcgtcc cgttctgcaa cggcgcgccg
     2221 aacctgtccg tcgacctgcc ggcgctggtg cagctcgcca ccgagcgcgg cgtgccgatc
     2281 tcgggcaagg acttcaagac gggccagacc tggatgaaga cgatcatcgc gccgggcctc
     2341 aaggcgcgca tgctcggcct cgccggctgg tactccacga acatcctcgg caaccgcgac
     2401 ggcgaggtgc tggacgatcc ggagtcgttc aagagcaagg aggtgtcgaa gctgggcgcc
     2461 ctcgagcaca tcctgcagcc gcatctgtat ccggagctct acgggtcgat gcaccacgtg
     2521 gtgcgcatc
//
LOCUS       DASSYW010000274         4489 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_743179, whole genome shotgun sequence.
ACCESSION   DASSYW010000274 DASSYW010000000
VERSION     DASSYW010000274.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4489)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4489)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4489
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_743179"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..383)
                     /locus_tag="VFN38_04345"
     CDS             complement(<1..383)
                     /locus_tag="VFN38_04345"
                     /inference="COORDINATES: protein motif:HMM:NF014269.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LON peptidase substrate-binding
                     domain-containing protein"
                     /protein_id="HET9011017.1"
                     /translation="MATHLPTIILRAMAKVQRKEEILKSELPAALPLMALRSTIVYPL
                     GTIAVQMGAPENLSLLRAYDEPGLVVALVVAGGDHDEPIDSQRFIGRVGVAARVHERI
                     NLPGDTVQITLQGLRRIVIEEIQQN"
     gene            complement(492..1481)
                     /locus_tag="VFN38_04350"
     CDS             complement(492..1481)
                     /locus_tag="VFN38_04350"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HET9011018.1"
                     /translation="MARPLVSIISPVYNQERYVAECIESALAQTYDQWEQIFVDDGSS
                     DGTRDVIARHRDPRIRLIALPHRGLGALAGSYNAALAVARGALVGILEGDDAWPVDKL
                     ERQVATFDDPATFLSWGRGALIDAASRPVRTMSTMKHAAPIMHVDAAAAFHRLTRENF
                     FIPSVTVMVRRSALDAIGGFRQTGSSLFVDLPTWLWLTASIDGRVTYLDRELGIYRHH
                     AAGTSSDKAAQMKLEHLRVVLAVETELGPAAMTRVGWDARSRRRALARGALVRGKIEL
                     RAGRHDEARRSYRDALTTATELGPRLRALRGVVSATSRGLAQRILPARRTPLT"
     gene            1804..>4489
                     /locus_tag="VFN38_04355"
     CDS             1804..>4489
                     /locus_tag="VFN38_04355"
                     /inference="COORDINATES: protein motif:HMM:TIGR04056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0071702 - organic substance transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SusC/RagA family TonB-linked outer membrane
                     protein"
                     /protein_id="HET9011019.1"
                     /translation="MPQRWFRSLLAGAFALTLIAGDAATAAAQSATVISGKVVNSASV
                     PIAGATVHIDGTQIGTLTGNDGGYLLTVPGGRTGTVTITARLIGFRMVKTPVTLSGAR
                     QTLDFTLVAQPTQLTEMVVTALSQQREKATIGSSQQEVSGEALTRTQTTNVVSAMSGK
                     VSGLQISQSGNMGGSTRIVIRGAGSILGNNQPLFVLDGVPISNSNLSTASANSGRDYG
                     SAISDLNMDDVASITVLKGPNAAALYGSRASNGAVVITTKNGRNEARGTKFNLTSRGT
                     YDTPSRLPDYQNQYGQGFGGEFQYVDGAGGGTNDGADESWGPKLDGRLIDQFTGKAQP
                     WVAHPDNISNFFRSGSSLSNNVSVSSAFDAGGARLSLTKDDTRGIVPNSSLSKLAGSL
                     SANATIREKLNISGALNYTQNRGLNRVENGYTEGNPLMSFTWFGRQVDVDALRNQYYN
                     TGSPYGFADGSLFNWNDNYHRNPYWQQYLNPAPDSRDRVIAQASAGYDFAPWLTGTVR
                     AGDDSYRFTREEQFAAGNIDRASASYNGGFTNTEIRNREANVEGLLTARKSVGMLDLT
                     ANLGGNRRRNDQYQAAFGTTGILVPGIYNLANAGIAPTISNAEFHSAVNSAYGSAVVT
                     VNRVWTVEATGRNDWSSTLPKENASYFYPSVSSSLIVSDLFPSLTDNGMLTYLKLRGS
                     WARVGSDADPYQLQTLYNGQSAKFGGLALYTLADKSANAALKPEQTTGREAGLELSLF
                     DDRITFDGSYYSKISRNQIIPLTIAPATGFTQTVINAGQISNKGFEMSITAKPIKLAN
                     GFSWTTTVNYNKNTSRVDELAEGLSLINIPPAVWNTNLQARVGEPYGQLYGPAFLRDS
                     ASGELLLSGGFPQRGANKVLGNVNPDWVGGWANDFRYKA"
BASE COUNT          774 a         1566 c         1491 g          658 t
ORIGIN      
        1 tcgttctgct ggatctcctc gatgacgatg cgacgcagcc cctggagggt gatctgcacc
       61 gtgtcaccgg ggaggttgat gcgctcgtgc acgcgcgccg ctacgcccac tcgcccgatg
      121 aagcgctgcg aatcgatcgg ctcgtcgtga tcgccgccgg cgaccacgag ggcgaccacc
      181 aggccgggtt cgtcgtacgc gcgcagcagg gacaaattct ccggcgcgcc catctgcacc
      241 gcgatggtac cgagcggata tacgatcgtc gagcgcagtg ccatcagggg cagcgccgcg
      301 gggagttcgg atttcaggat ctcttccttg cgctgaacct tggccatggc gcgtaagata
      361 atggtgggca ggtgggtggc cacggtgcac ggcgcgcgcc gccacgctgt cggcttgcgc
      421 gtctcacgcg cgtctgacga cgaggcggac ggtggtgggg tcacgagcgg acccaaccgg
      481 tcaactaccc gtcaggtgag gggcgttcgg cgtgcgggca ggatccgttg cgcgagccct
      541 cggctcgtcg ccgacacgac gcctcggagc gcgcgcaggc gaggcccgag ctcggtcgcg
      601 gtcgtcagtg cgtcgcggta gctgcgccgt gcttcgtcgt gccgaccggc gcggagctcg
      661 atcttgccgc ggacgagcgc accccgggcc agcgcgcgac gccggcttcg tgcgtcccag
      721 cccacccggg tcatcgccgc gggcccgagc tccgtctcca cggcgagcac gacgcggaga
      781 tgctccagct tcatctgcgc cgccttgtcg ctgctcgtgc ccgccgcgtg atgacgatag
      841 atgccgagct cgcggtcgag gtacgtcacg cgcccgtcga tcgaggcggt cagccagagc
      901 caggtgggca ggtcgacgaa cagggagctc cccgtctgcc tgaagccgcc gatcgcgtcg
      961 agcgccgagc gccggaccat gacggtgacg gaggggatga agaagttctc gcgcgtgagg
     1021 cgatggaagg cggcggccgc gtcgacgtgc atgatcggcg cggcgtgctt catcgtcgac
     1081 atggtgcgca cgggacggct cgccgcgtcg atcagcgcgc cccgccccca gctcaggaag
     1141 gtggcgggat cgtcgaaggt ggcgacctgc cgctcgagct tgtccaccgg ccacgcatcg
     1201 tccccctcga ggatgcccac gagcgcgccg cgcgccacgg ccagcgcggc gttgtagctc
     1261 ccggccagcg cgccgagccc gcgatggggc agggcgatca ggcgaatgcg gggatcgcga
     1321 tgccgcgcga tgacgtcgcg ggtgccgtcg ctcgatccgt cgtcgacgaa gatctgctcc
     1381 cactggtcgt acgtctgcgc cagtgcgctc tcgatgcact cggcgacgta ccgctcctgg
     1441 ttgtagacgg gcgagatgat cgagacgagg gggcgggcca tggcagaaga ataggccggc
     1501 ggctgcaccg atgcgtcgcg aacgtcgacg ggcggtcaac tggcgatctg ggcagtacat
     1561 cggcgcgcgc gtgccgccgg gcgagcatcc cgggcagccg acagcaccca tcattgactc
     1621 cggcggggag cggtcgtaga tacggcgggc agaacatcga gtcactgtag agcgccgtcc
     1681 cgcctcagcc tcgttctgcg atcaggcgag tgccgtcgat cgactcgcct ggctcggctc
     1741 gcaccggccc ccatccggtg cgcgcaaagc aacccctatc cccctccaaa gaggttctgg
     1801 atcatgccac aaagatggtt ccgctcgttg ctagcgggag cgtttgccct gacgctcatc
     1861 gccggcgacg ctgcgacggc agccgcgcag agcgcgacgg tgatctccgg gaaagtcgtc
     1921 aactcggcat ccgtgcccat tgcgggcgcc acggtgcaca tcgatggcac ccagatcggt
     1981 accctcaccg gcaacgacgg cggctatctg ctgaccgtcc ccggcgggcg caccggcacg
     2041 gtgaccatca cggcgcgcct catcggcttc cgcatggtca agacgcccgt gaccctgagt
     2101 ggcgcgcgcc agaccctcga cttcacgctc gtcgcccagc cgacgcagct caccgagatg
     2161 gtcgtgacgg cgctcagcca gcagcgcgag aaggccacga tcgggtcgtc gcagcaggaa
     2221 gtgagcggcg aagcgctgac gcgcacgcag acgaccaacg tcgtgagcgc gatgtcgggc
     2281 aaggtctccg gcctgcagat cagccagagc ggcaacatgg gcggctccac gcgcatcgtg
     2341 atccgcggcg cgggctcgat cctcggcaac aaccagccgc tgttcgtgct cgacggtgtg
     2401 cccatctcca actccaacct ctcgaccgcc agcgccaaca gcggccgcga ttacggcagc
     2461 gcgatctccg acctgaacat ggacgacgtc gcgtccatca cggtgctcaa gggtccgaac
     2521 gccgcggccc tctacggctc gcgggcctcg aacggcgccg tggtcatcac cacgaagaac
     2581 ggccgcaacg aggcgcgcgg cacgaagttc aacctcacca gccgcggcac ctacgacacg
     2641 ccgtcgcgcc tcccggacta ccagaatcag tacgggcagg gcttcggcgg cgagttccag
     2701 tacgtcgacg gcgccggcgg cgggacgaac gacggagccg acgagtcgtg ggggcccaag
     2761 ctggacggcc ggctcatcga ccagttcacc ggcaaggcgc agccgtgggt cgcgcacccc
     2821 gacaacatct cgaacttctt ccggtccggc agctcgctgt ccaacaacgt cagcgtctcc
     2881 tcggcgttcg acgccggcgg tgcacgcctg tcgctgacca aggacgacac gcgcggcatc
     2941 gtgccgaaca gctcgttgag caagctggcc ggatcgctct cggcgaacgc gacgatccgc
     3001 gagaagctca acatctccgg cgcgctcaac tacacccaga accgggggct gaaccgcgtc
     3061 gagaacggct acaccgaagg caacccgctg atgagcttca cctggttcgg tcgccaggtg
     3121 gacgtggatg ccctccggaa ccagtactac aacaccggca gcccgtacgg cttcgccgac
     3181 ggctcgctgt tcaactggaa cgacaactac catcgcaatc cgtactggca gcagtatctg
     3241 aacccggcgc cggactcgcg cgatcgcgtc atcgcgcagg cgtcggcggg ctacgacttc
     3301 gcgccgtggc tcaccggaac cgtccgggcg ggtgacgatt cctaccgctt cacgcgcgag
     3361 gagcagttcg cggccggcaa catcgaccgc gccagcgcct cgtacaacgg cggcttcacc
     3421 aacacggaga tccgcaaccg cgaggcgaac gtcgaagggc tgctgacggc caggaagagc
     3481 gtcggcatgc tggacctcac ggccaacctg ggcggcaacc gccgccgcaa cgatcagtac
     3541 caggccgcgt tcggcaccac gggcatcctc gtgccgggca tctacaacct cgcgaacgcc
     3601 ggcatcgcgc cgacgatctc caacgccgag ttccactcgg cggtgaactc ggcatacggt
     3661 tcggccgtcg tcacggtgaa ccgcgtctgg acggtggaag ccaccggtcg caacgactgg
     3721 tcgtccacgc tgccgaagga gaacgcgtcg tacttctacc cgtcggtcag ctcgtcgctc
     3781 atcgtgtcgg atctctttcc gtcgctgacc gacaacggca tgctcacgta cctcaagctg
     3841 cgcggcagct gggcgcgcgt gggctccgac gccgatccgt accagctcca gacgctgtac
     3901 aacggacagt ccgccaagtt cggcggcctg gcgctgtaca cgctcgccga caagtcggcg
     3961 aacgcggcgc tgaagccgga gcagacgacg ggtcgggaag ccggcctcga gctctcgctg
     4021 ttcgacgacc ggatcacctt cgacggctcg tactactcga agatctcgcg gaaccagatc
     4081 atcccgctga ccatcgcgcc ggcgacgggc ttcacccaga ccgtcatcaa cgccggccag
     4141 atcagcaaca agggcttcga gatgagcatc acggccaagc cgatcaagct ggccaacggc
     4201 ttctcgtgga ccacgaccgt caactacaac aagaacacga gccgcgtgga cgagctggcc
     4261 gaagggctgt cgctcatcaa catcccgccc gccgtgtgga acacgaacct gcaggctcgc
     4321 gtcggggagc cctacggcca gctgtacggc ccggccttcc tgcgtgactc cgcgtccggc
     4381 gagctgctgc tgtccggcgg tttcccgcag cgcggggcga acaaggtgct cggcaacgtg
     4441 aacccggact gggtcggtgg ctgggccaac gacttccggt acaaggcgt
//
LOCUS       DASSYW010000275         2320 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_232881, whole genome shotgun sequence.
ACCESSION   DASSYW010000275 DASSYW010000000
VERSION     DASSYW010000275.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2320)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2320)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2320
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_232881"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1117
                     /locus_tag="VFN38_04360"
     CDS             <1..1117
                     /locus_tag="VFN38_04360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HET9011020.1"
                     /translation="LDALREAILQALMESGQFTPEMLEALRGEGDEEAQGKLAKLLDD
                     LVKRLVAEGYLNLDTPPMMPAGHQPLEGKGSLAQAAARDVNFSLTEKGIDFLGYKTLR
                     GLLGSLGKSSFGSHDTPYLATGIEADGWSKHYEFGDVLNIDVNETLKNSMMRTGDVTV
                     PMDLEYSDLMVRQAEYRSSCATVLMLDCSHSMILYGEDRFTPAKKVALALTHLIRTQF
                     PGDTIKVVLFHDGAEEIPLATLASAQVGPYHTNTAEGLKLARRLLMAQKKDMRQIIMI
                     TDGKPSALTMPDGQIYQNSFGLDVTVIEKTLQEVAACRKSGIMINTFMLARDRALVEF
                     VKRMSEISRGKAYFTTTMTLGQFILMDFLKRKTRKVS"
     gene            1242..1637
                     /gene="crcB"
                     /locus_tag="VFN38_04365"
     CDS             1242..1637
                     /gene="crcB"
                     /locus_tag="VFN38_04365"
                     /inference="COORDINATES: protein motif:HMM:NF010791.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HET9011021.1"
                     /translation="MRTFWAIAIGAALGGVSRYYLASSVQQRFGASFPWGTLLVNVTG
                     SLLLGFLIRYALSTPAVSVELRALLTTGFCGGYTTFSTFSFETAALIEDGQYERAGAY
                     VLGSVVLSLVATFCGFILARELLAFRGRV"
     gene            1664..2044
                     /locus_tag="VFN38_04370"
     CDS             1664..2044
                     /locus_tag="VFN38_04370"
                     /inference="COORDINATES: protein motif:HMM:NF014677.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF190 domain-containing protein"
                     /protein_id="HET9011022.1"
                     /translation="MHGLTGERVLMRIHIGERDKFEGKPLYAAIVELLRRRRYAGATV
                     LRAIMGFGASSTLHTDRIEVLSLDLPIVVECVETAERIDAILPEIDAMIGGGLITLER
                     AKVIIYRPHAREDAAGSVRGPGAA"
     gene            2055..>2320
                     /locus_tag="VFN38_04375"
     CDS             2055..>2320
                     /locus_tag="VFN38_04375"
                     /inference="COORDINATES: protein motif:HMM:NF015763.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011023.1"
                     /translation="MLTALLTVLVLGFLLGMRHATDPDHVVAVTTIVSHQRSLARAAR
                     TGVLWGLGHTATILLVGGAIIVLKVQLSGIPPRLGLSLEFAVAV"
BASE COUNT          361 a          795 c          797 g          367 t
ORIGIN      
        1 gctcgacgcg ctccgcgagg cgatcctcca ggccctgatg gagagcggcc agttcacccc
       61 ggagatgctc gaggcgctgc gcggcgaggg cgacgaggag gcgcagggga agctggccaa
      121 gctcctcgac gacctggtga agcggctcgt ggccgagggg tacctcaacc tcgacacgcc
      181 cccgatgatg cccgccggtc accagccgct ggagggaaag ggctcgctgg cgcaggcggc
      241 cgcacgcgac gtgaacttca gcctcaccga gaaggggatc gacttcctcg gctacaagac
      301 gctgcgcggg ctcctcggct cactgggcaa gtcgagcttc gggagccacg acactcctta
      361 tctcgccacc ggcatcgagg ccgacggctg gagcaagcac tacgagttcg gggacgtcct
      421 gaacatcgac gtcaacgaga ccctgaagaa ctccatgatg cgcaccggcg acgtcacggt
      481 gccgatggat ctcgagtatt cggacctcat ggtgcgccag gccgagtacc gctcgagctg
      541 cgccacggtg ctgatgctcg actgctcgca ctcgatgatc ctctacggcg aggaccgctt
      601 cacgcccgct aagaaggtcg cgctcgccct cacgcacctc attcgcaccc agtttccggg
      661 cgacacgatc aaggtcgtgc tcttccacga cggcgccgag gagatcccgc tcgccacgct
      721 ggcgagcgcg caggtggggc cgtaccacac caacacggcg gaggggctga agctcgcccg
      781 ccgcctgctg atggcccaga agaaggacat gcggcagatc atcatgatca ccgacggcaa
      841 gccgagcgcg ctgacgatgc ccgacggcca gatctaccag aactcgttcg gcctggacgt
      901 cacggtgatc gagaagacgc tgcaggaggt ggccgcctgc cggaagtcgg ggatcatgat
      961 caacaccttc atgctcgcgc gcgaccgcgc gctggtggag ttcgtgaagc ggatgagcga
     1021 gatcagccgc ggcaaggcct acttcacgac gacgatgacg ctggggcagt tcatcctgat
     1081 ggacttcctg aagcgcaaga cgcgcaaggt gagctgagcg gccggcctcc cggccgaggg
     1141 ggagaggggc ggcggcgtgc cgggacggat agattgtccg cgcgccgtcc gcggcgcggc
     1201 cgccggcggc gccgacggga acccctcatg ccgaggtgct ggtgagaacg ttctgggcca
     1261 tcgcgatcgg cgccgcgctg ggcggcgtgt cccgctatta tctcgcgtcg tcggtgcagc
     1321 agcggttcgg ggcgtcgttc ccgtggggaa ccctcctcgt caacgtgacg ggcagcctcc
     1381 tgctcggctt cctcatccgc tacgcgctgt cgacccccgc cgtgagcgtc gagctgcgcg
     1441 cactgctcac cacgggcttc tgcggcggct acaccacctt ctccaccttc agcttcgaga
     1501 cggcggccct gatcgaggac gggcagtacg agcgcgcggg ggcgtacgtg ctcggcagcg
     1561 tcgtgctctc gctcgttgcc accttctgtg gcttcatcct ggcgcgcgag ctgctcgcgt
     1621 tccggggccg ggtctgacgg tcgacatcat cgccggaggg agcatgcacg gcctgacggg
     1681 tgaacgcgtc ctgatgcgga tccacatcgg ggagcgcgac aagttcgagg ggaagccgct
     1741 gtacgccgcg atcgtcgagc tgctccggcg ccgcaggtac gcgggcgcca cggtgctccg
     1801 ggcgatcatg gggttcggcg cgagctccac cctgcacacc gaccggatcg aggtcctctc
     1861 gctcgacctg cccatcgtcg tcgagtgcgt ggagaccgcc gagcgcatcg acgcgatcct
     1921 ccccgagatc gatgcgatga tcggcggggg gctcatcacg ctcgagcgcg cgaaggtgat
     1981 catctatcgt ccccacgcgc gcgaggacgc ggccggctcg gtgcgcggcc cgggcgccgc
     2041 ttagctttcc cgccatgctc accgccctcc tcaccgtgct cgtgctgggc ttcctgctcg
     2101 gcatgcgtca cgccaccgat ccggatcatg tcgtggcggt gacgaccatc gtctcgcacc
     2161 agcgctcgct cgcgcgcgcc gcgcgcaccg gggtgctgtg ggggctgggc cacacggcca
     2221 cgatcctgct cgtcggcggg gcgatcatcg tgctcaaggt ccagctctcg gggatcccgc
     2281 cgcgcctcgg gctgtcgctc gagttcgcgg tggcggtgat
//
LOCUS       DASSYW010000276         2775 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1570791, whole genome shotgun sequence.
ACCESSION   DASSYW010000276 DASSYW010000000
VERSION     DASSYW010000276.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2775)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2775)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2775
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1570791"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..707)
                     /gene="sucD"
                     /locus_tag="VFN38_04380"
     CDS             complement(<1..707)
                     /gene="sucD"
                     /locus_tag="VFN38_04380"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HET9011024.1"
                     /translation="MSIFIDNSSTVIVQGITGRDGSFHTKQMIEYRTKIVGGVTPGKG
                     GQKFEGTVPIFNTVHEAVKATGANTSVIYVPPMFAADAMMEAADAGIRFIVAITEGVP
                     VNDMTKVYPFVKEKGARLLGPNCPGLITPGQSKVGIIPGRICTPGNIGVVSRSGTLTY
                     EVVYQLTRAGMGQSTCVGIGGDPINGTNFIDCLAAFEADPQTKAVAMMGEIGGTDEQE
                     AAEFVRKHMKKPVVGFIA"
     gene            complement(704..1849)
                     /gene="sucC"
                     /locus_tag="VFN38_04385"
     CDS             complement(704..1849)
                     /gene="sucC"
                     /locus_tag="VFN38_04385"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HET9011025.1"
                     /translation="MNIHEFQAKELLRAEGVPIPPGEVATSAEQAEAIAKKIGGMVVV
                     KAQVHTGGRGKAGGVKLAKNAAEARELAGKILGMKINGLTVHQVLVTSAADIATEAYV
                     GIILDRASKKPVFMVSPAGGIDIEEVAAKTPEKIMTLPIDTRYGLQPYQASELGFFLF
                     DDVKKVRAASKIMMALYQAFMKNDASLAEINPLVVTPSGEVLALDAKVSIDDNALDRH
                     PELVQLRDETAEEPSEVDARNSNLTFIKLDGDVGCVVNGAGLAMATMDLVKYYGGEPA
                     NFLDIGGSSNPEKVVNALRIITADPSVKVILFNIFGGITRTDDVANGIVTATRANPLK
                     IPIVIRLTGTNEEIAMKILQENGFSASSDMDEAVQKAVALAKGGKAA"
     gene            complement(1923..>2775)
                     /locus_tag="VFN38_04390"
     CDS             complement(1923..>2775)
                     /locus_tag="VFN38_04390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011026.1"
                     /translation="QRFTVLGEERGYVQHAATALVHAASGRVRLVVGPAPDPVASSWI
                     ARFPRLFTRPVSLPSALQDALPPATDGARAQALAFAAAGFRGDSLEVRHFASPDGADS
                     AASREPVRVALPGSGVAAIWPLLDDHERVRGVIAAESGAQRATAWIPLTTDGARWGRI
                     VDRLRAADTASHDNGLVRAPVRVLPAHGRPLYAQAVYQWRPGGSPRIARVTVLADDSV
                     RVAATLTAAVGGAPPSRVAGAPPADLRARADSLYRAMREALARGDWSAFGRAFDALGS
                     TLRPSVP"
BASE COUNT          379 a          953 c          983 g          460 t
ORIGIN      
        1 gcgatgaagc cgacgaccgg cttcttcatg tgcttgcgca cgaactcggc ggcttcctgc
       61 tcgtcggtgc ccccgatctc gcccatcatc gccaccgcct tggtctgcgg gtcggcctcg
      121 aacgccgcga ggcagtcgat gaagttggtg ccgttgatcg gatcgccccc gatgccgacg
      181 caggtgctct gccccatgcc ggcgcgggtg agctggtaca ccacctcgta ggtgagcgtc
      241 cccgaacggc taacgacccc gatgttgccc ggcgtgcaga tccgaccggg gatgatcccc
      301 accttgctct ggccgggcgt gatgagcccc gggcagttgg gaccgagcag gcgcgcgccc
      361 ttctccttca cgaacggata gaccttcgtc atgtcgttca ccggcacccc ctcggtgatc
      421 gcgacgatga accggatccc cgcgtcggcg gcctccatca tcgcgtcggc ggcgaacatc
      481 ggcggcacgt agatgacgga ggtgttggcg ccggtcgcct tcaccgcctc gtggacggtg
      541 ttgaagatgg gcaccgtgcc ctcgaacttc tggccgcctt tgcccggggt gacgccgccg
      601 acgatcttcg tgcggtactc gatcatctgc ttcgtgtgga acgagccgtc gcggcccgtg
      661 atcccctgga cgatgacggt gctggagttg tcgatgaaga tgctcacgcg gccttccctc
      721 ccttggccag cgcgacggcc ttctgcaccg cctcgtccat gtcggacgac gcgctgaagc
      781 cgttctcctg caggatcttc atggcgatct cttcgttcgt gccggtgagg cggatgacga
      841 tggggatctt gagcgggttc gcccgggtgg ccgtgacgat gccgttggcc acgtcatcgg
      901 tgcgggtgat gccgccgaag atgttgaaca ggatgacctt cacgctggga tcggcggtga
      961 tgatgcgcag ggcgttgacg accttctcgg ggttggacga gccgccgatg tcgaggaagt
     1021 tcgccggctc gccgccgtag tacttcacga ggtccatcgt ggccatcgcg aggccggcgc
     1081 cgttcaccac gcagccgacg tcgccgtcga gcttgatgaa ggtgaggttc gagttgcggg
     1141 cgtccacctc gctcggctcc tcggccgtct cgtcgcgcag ctgcacgagc tcggggtgcc
     1201 gatcgagggc gttgtcgtcg atggagacct tcgcgtcgag ggcgagcacc tcgcccgacg
     1261 gggtcacgac gagcgggttg atctcggcga gcgacgcgtc gttcttcatg aacgcctggt
     1321 agagcgccat catgatcttc gaggcggccc ggaccttctt gacgtcgtcg aacaggaaga
     1381 agccgagctc cgacgcctgg tacggctgca acccgtagcg cgtgtcgatc gggagcgtca
     1441 tgatcttctc gggggtcttc gcggcgacct cctcgatgtc gatgccgccg gccgggctca
     1501 ccatgaacac cggcttcttg gacgcgcggt cgaggatgat gccgacgtag gcctcggtgg
     1561 cgatgtcggc ggcggacgtc acgagcacct ggtgcaccgt gaggccgttg atcttcatgc
     1621 cgaggatctt gcccgccagc tcgcgagcct cggccgcgtt cttggcgagc ttcacgccgc
     1681 cggccttgcc gcgcccgccc gtgtgcacct gtgccttcac gacgaccatg ccgccgatct
     1741 tcttcgcgat cgcctcggcc tgctcggcgc tcgtcgcgac ttcgcccgga ggaatcggca
     1801 cgccctcggc gcgcagaagc tccttggcct gaaattcgtg gatgttcacg ccttctccgc
     1861 tgtgatggtc gaacctggtg acagccgtgg caagctagac ccggccgatg cgccgggcaa
     1921 gctcacggca cgctcggacg cagcgtgctg ccgagcgcat cgaacgcgcg tccgaacgcg
     1981 ctccagtcgc cgcgcgcgag ggcctcgcgc atcgcccgat acaggctgtc cgctcgcgcg
     2041 cggaggtccg cgggaggggc gccggcgacg cgcgacgggg gtgcgccgcc gaccgccgcg
     2101 gtcaacgtgg cggcgacgcg taccgaatcg tcggcgagga cggtgacgcg ggcgatccgc
     2161 gggctccctc cgggccgcca ctgataaacc gcctgggcgt agagtggtcg cccgtgcgcg
     2221 gggagcaccc gcaccggcgc gcggaccaga ccgttgtcgt ggctcgccgt gtcggcggcg
     2281 cgcaggcggt ccacgatgcg gccccatcgc gcgccgtcgg tggtgagcgg gatccaggcc
     2341 gtggcgcgct gggcgccgct ctcggcggcg atcacgccgc gaacgcgctc gtggtcgtcg
     2401 agcaggggcc agatcgccgc gacgccgctg cctggcaggg cgacacgtac cggctcgcgc
     2461 gacgccgcgg agtcggcccc gtcgggcgag gcgaagtgcc gcacctcgag gctgtcgccg
     2521 cgaaagcccg ccgcggcgaa ggcgagcgcc tgcgcgcgcg cgccatcggt ggccgggggc
     2581 agcgcgtcct ggagagcgct cggcagcgac acgggcctcg tgaacagccg cggaaagcgc
     2641 gcgatccagc tggacgccac cggatcgggc gccggcccga cgaccaggcg gacgcgcccg
     2701 ctcgcggcgt ggaccagcgc ggtggcggca tgctggacgt agccccgctc ctcgccgagc
     2761 accgtgaacc gctgg
//
LOCUS       DASSYW010000277         2367 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_556896, whole genome shotgun sequence.
ACCESSION   DASSYW010000277 DASSYW010000000
VERSION     DASSYW010000277.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2367)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2367)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2367
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_556896"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..511)
                     /locus_tag="VFN38_04395"
     CDS             complement(<1..511)
                     /locus_tag="VFN38_04395"
                     /inference="COORDINATES: protein motif:HMM:NF012698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HET9011027.1"
                     /translation="MLVSTDDVLYERSIGGDGHRVAPDGSGECLIRLLGPLEVESDGV
                     VAELGPPKQRALLALLALSPNEVVSTDRLILHLWGERAPRTARHSIQIYVSELRKAFA
                     ALTTAPAIATRSPGYRLEVPPDAIDAPRFEQLVGLGRRAARNGDVAGSSAALRAALGL
                     WRGPALFEFM"
     gene            complement(611..>2367)
                     /locus_tag="VFN38_04400"
     CDS             complement(611..>2367)
                     /locus_tag="VFN38_04400"
                     /inference="COORDINATES: protein motif:HMM:NF013109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015103 - inorganic anion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="SulP family inorganic anion transporter"
                     /protein_id="HET9011028.1"
                     /translation="LPDRLAERQRRAARRFAWSVVKRPVIAARLAAILPRRSDYAGFS
                     ASWKTDVIAGLTVGVVALPLALAFGITTGLGADAGLITAIVAGLVAAVFGGSSVQVSG
                     PTGAMTVVLVPIIAKYGRDAVFVVGLLAGVFVIAAAFGRLGRYLAYMPWPVVEGFTVG
                     IAIIIFLQQVPAALGVPKPEGENTAAVAVRATGDFLADGRGQAVGLVLLVAAVMIVVP
                     RIRRSLPASLIAVAGATIVAQGASMDVARIGSLPSSLPRPTLPETSFSQVRDLLSAAF
                     AVAILAAIESLLSAKVADGMADVPRHDPDRELFGQGLANLVSPLFGGMPATGAIARTA
                     VNVRAGARTRAAAAIHALVLLVVVFFAGGLVSKIPLAALAGVLMVTAWRMVEVHNVRA
                     VARSTRSDAVVLVATTIATVAFDLIVAIEVGVAIAALLALRHVALNSEAERETLPADE
                     LLDSTEEAKLLHDHIVVFRIDGALFFGAAQRFLTELTAVTDVRVMILRLSQVQSLDAT
                     GAQALGEIVEELESRGITVLLKGARPSHRRILEAVGTLDHLAHQRHLFDNLDDAIAHA
                     RVHLARTPHPDREPSPAS"
BASE COUNT          434 a          817 c          817 g          299 t
ORIGIN      
        1 acatgaactc gaagagggcc ggtccacgcc agagcccgag cgccgcgcgc aatgcggcgg
       61 acgagccggc gacgtcgccg ttacgcgccg cgcgcctccc gaggccgaca agttgctcga
      121 agcgcggtgc atcgatggca tcgggcggaa cctccaggcg gtatcccgga gaccgcgtag
      181 cgatcgccgg cgccgtcgtc agcgcggcga acgcctttcg cagctccgag acgtagatct
      241 gaatcgaatg acgggccgtg cgcggcgccc gttcacccca gaggtgcagg atcagccggt
      301 ccgttgacac gacctcgttg gggctcagag cgagcagagc cagcaacgcg cgctgcttgg
      361 gcgggccaag ctcggcgacc acgccatcgg actcgacctc gagcggaccg aggaggcgaa
      421 tcaaacactc gcccgagcca tcaggcgcga cgcgatggcc gtctcccccg attgaccgct
      481 cgtacagcac gtcatccgtc gacaccagca ctccctcgcc ccgcggtggc cgtatccgcc
      541 gacattaacg cgcccgcatt gtaactcact gcgcggcgcg aggattcaag gtcaacttcg
      601 caggctcgtc ctatgaagcc gggctcggtt ctcgatccgg atggggcgtg cgggcgaggt
      661 ggacgcgggc gtgggcgatg gcgtcatcga ggttgtcgaa caggtgacgt tgatgggcga
      721 ggtggtcgag ggtgccgacg gcttcgagga ttcgccggtg gctcggccgc gcacctttga
      781 gcagcacggt gatgccgcgc gactcgagct cctcgacgat ctcgcccaaa gcctgggcgc
      841 cggtggcgtc gagcgactgc acctgcgaga ggcgcaggat catgacgcgc acatcggtga
      901 cggcggtgag ctcggtgagg aagcgctgcg ccgcgccgaa gaacaacgcc ccgtcgatgc
      961 ggaacacgac gatgtgatcg tgcagcagct tggcctcctc cgtgctgtcg aggagctcat
     1021 cggccggcag cgtctcccgc tccgcctcac tgttgagggc gacatggcgc aacgccagga
     1081 gcgcggcgat ggcgacgccg acctcgatgg cgacgatgag atcgaacgcc acggtggcga
     1141 tcgtcgtggc gacgagcacc acggcgtccg agcgcgtcga acgggcgacg gcgcgcacgt
     1201 tgtgcacctc gaccatccgc caggcggtga ccatcagcac cccggcgagg gcggcgagtg
     1261 ggatcttgga gaccaggccg ccggcgaaga agacgacgac caacagcacg agggcgtgga
     1321 tggcggcggc tgcgcgcgtg cgcgcgcccg cacgcacgtt gacagcggtg cgggcgatcg
     1381 cacccgtcgc cggcatgcca ccgaacagcg gggacaccag gttggccaga ccttgaccga
     1441 acagctcgcg gtcgggatcg tggcgcggga cgtcggccat cccgtcggcg accttcgccg
     1501 agagcagact ctcgatcgcc gcgaggatcg ccacggcgaa cgcggccgac aacaggtcgc
     1561 ggacctggga gaacgacgtc tcgggcaacg ttgggcgtgg cagcgaactc ggcagcgacc
     1621 cgatgcgggc gacgtccatc gacgcgcctt gggccacgat cgttgccccc gccaccgcga
     1681 tcaatgacgc cggcaacgag cggcggatcc gtggcacgac gatcatcacc gcggcgacaa
     1741 gcaacaccag tccgaccgct tgcccgcgcc cgtcagcgag aaagtccccc gtggcgcgca
     1801 cagcaaccgc ggcggtgttc tcgccctccg gcttgggcac cccgagcgcc gcaggcacct
     1861 gctgcaggaa gatgatgatg gcgatcccga cggtgaaccc ctccaccacc ggccacggca
     1921 tatacgccag gtagcgcccg agacggccga atgctgcggc gatcacgaac acgccggcga
     1981 gcagtccgac gacgaagacc gcatcgcgtc cgtacttggc gatgatcggc accaggacga
     2041 cggtcatcgc gccggtcggg ccggacacct ggacgctcga accgccgaac acggcggcga
     2101 cgagaccggc gacgatcgcc gtgatcaacc cggcatcggc accgagaccg gtggtgatgc
     2161 cgaacgccag cgcaagcggc aaggcgacga cacccaccgt cagaccggcg atcacatccg
     2221 tcttccacga cgcgctgaac ccggcgtaat cgcttcggcg cggcaggatt gctgccaagc
     2281 gcgcggcgat caccggccgc ttcacgacgg accacgcaaa ccggcgagca gcccttcgct
     2341 gacgctcagc gagtcgatca ggaagcg
//
LOCUS       DASSYW010000278         2411 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1422548, whole genome shotgun sequence.
ACCESSION   DASSYW010000278 DASSYW010000000
VERSION     DASSYW010000278.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2411)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2411)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2411
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1422548"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..851)
                     /locus_tag="VFN38_04405"
     CDS             complement(<1..851)
                     /locus_tag="VFN38_04405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011029.1"
                     /translation="MSAPTPRPLALPAGLAFGDLYSAGGAARVDALFVAHLREADAAL
                     ADRLMQARAEPDALERKAESELLIALAPHVEDFLAALFGIVAETRALEARHHELAPLY
                     SVKRLFVQRRAMNAHKPEAAAAFDGAALRRTVETAMGEPLTELAFANAVTRWQQDEDA
                     HGAALDAATRYAAWAAHTPAGRAVHRGGLLFRAPRKLDHLQLVALEAVHIDGVTAWKH
                     PGDHLRRREGFALTDPGMDLPAALGEAHYCIWCHEQGKDSCARGLPEKKPADGDPQPI
                     PFRRSPFG"
     gene            1073..2275
                     /locus_tag="VFN38_04410"
     CDS             1073..2275
                     /locus_tag="VFN38_04410"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HET9011030.1"
                     /translation="MIRFARFACLAAALATVAAALPAAAQPIKLGELNSYKTFPAFLE
                     PYKKGMDLAVAEINAAGGVLGRPLEIVVRDDNGNPGDAVRVAEELLSREKVALLMGTF
                     ASNVGLAVADLAKQRKVLFLAAEPLTDKIVWESGNRYTFRLRASTYMQTAMLAPEAAK
                     LGKKRWAIVYPNYEYGQAATAAFKQLMNGLQGSGIEFVEYAVPLGKIDAGPVVQALLD
                     AKPDAIFSSLFATDLARFVREGELRGLFKDRPVFNLLGGEPEYLDPLKEEAPVGWWVT
                     GYPWYAIDTAAHKRFRDAYQAKFNDYPRLGSVVGYSAVKAAAAAIQKAGSTDTEKMLA
                     AMAGLSFETPFGTVSFRASDHQSTMGAYVGKTAVKEGHGTMADWHYADGAKYLPSDAE
                     VKKLRPQQ"
BASE COUNT          351 a          835 c          858 g          367 t
ORIGIN      
        1 ccgaacgggc tgcggcggaa cggaatcggc tgggggtcgc cgtcggccgg cttcttctcg
       61 ggcagcccgc gcgcgcagga atccttgccc tgctcgtggc accagatgca gtaatgggct
      121 tcgccgagcg ccgcgggcag gtccatgccc gggtcagtca gcgcgaagcc ttcgcgccgc
      181 cgcaggtgat cgcccggatg cttccaggcg gtgacgccgt cgatgtgaac cgcttcgagc
      241 gcgacgagct ggaggtgatc gagcttgcgc ggcgcgcgga acaggaggcc gccgcggtgc
      301 accgcgcgcc ccgccggcgt gtgcgcggcc cacgccgcgt agcgcgtggc ggcgtcgagc
      361 gccgccccat gggcgtcttc atcctgctgc cagcgcgtga cggcgttcgc gaacgcgagc
      421 tcggtcaggg gctcgcccat cgccgtctcg accgtgcgcc ggagcgccgc gccgtcgaac
      481 gccgccgcgg cctccggctt gtgcgcgttc atcgcccgcc gctggacgaa caggcgcttg
      541 accgagtaga gcggcgcgag ctcatggtgg cgcgcttcga gcgcgcgagt ctcggcgacg
      601 atgccgaaca gcgcggcgag aaagtcctcg acgtggggcg cgagcgcgat cagtagttcg
      661 ctctcggcct tgcgctccag cgcgtccggt tcggcgcgcg cctgcatcag ccggtcggcg
      721 agtgccgcgt ccgcctcgcg taggtgcgcg acgaacagcg cgtcgacgcg cgcggccccg
      781 ccggcgctgt agagatcgcc gaatgcgagg cccgcgggca gcgcgagcgg tcggggcgta
      841 ggcgcggaca ttgccggacg cgtggggcgt ttcgcgcaaa aaaggatcga ttttaccgtc
      901 gccgccgggg catcgtcagg ccgacgggtt ctatgcttgt gctcggggcg tggcgggccc
      961 gttcttggga ctcctcgcgg atgcccccaa tatgtggtca accgtcaagg ctttccaccc
     1021 gtttacggct gccgcgttgg acaatacgca ttcgacccgt tccggaggtc cgatgatccg
     1081 cttcgcccgc ttcgcttgcc tcgccgccgc actggccacc gtcgccgcgg cgcttccggc
     1141 cgcggcgcag ccgatcaagc tcggcgagct caacagctac aagaccttcc cggcgttcct
     1201 cgagccgtac aagaagggga tggacctcgc cgtcgcggaa atcaacgcgg ccggcggcgt
     1261 gctcgggcgg ccgctcgaga tcgtcgtgcg cgacgacaac ggcaaccccg gcgatgcggt
     1321 gcgcgtcgcg gaagagctgc tctcgcgcga gaaggtcgcg ctactcatgg gcacgttcgc
     1381 gtcgaacgtc ggtctcgccg tcgccgatct cgcgaagcag cggaaggtgc tgttcctcgc
     1441 cgctgagccg ctcacggaca agatcgtctg ggagtcgggc aaccgctaca ccttccggct
     1501 gcgcgcgtcg acgtacatgc agacggcgat gctcgcgccc gaggcggcga agctcggcaa
     1561 gaagcgctgg gcgatcgtct acccgaacta cgaatacggc caggcggcca cggccgcgtt
     1621 caagcagctg atgaacggac tgcagggcag cggcatcgag ttcgtcgagt acgcggtgcc
     1681 gttgggcaag atcgacgcgg gccctgtcgt gcaggcgctc ctcgacgcga agcccgacgc
     1741 catcttctcg tcgctgttcg cgaccgacct cgcgcgcttc gtccgggagg gcgagctgcg
     1801 cggactgttc aaggatcgcc cggtgttcaa cctgctgggg ggcgagcccg agtaccttga
     1861 cccgttgaag gaggaggcgc ccgtcggctg gtgggtcacc ggctacccct ggtacgcaat
     1921 cgacaccgcc gcgcacaagc gctttcggga cgcctaccag gccaagttca acgactatcc
     1981 ccggctgggc tcggtcgtcg gctacagcgc cgtgaaggcc gccgccgcgg cgattcagaa
     2041 ggccggctcg accgacaccg agaagatgct ggccgcgatg gccggactct cgttcgagac
     2101 gccgttcggc acggtctcgt tccgcgcttc cgaccatcag tcgacgatgg gtgcttatgt
     2161 cggcaagacc gcggtcaagg aaggccacgg aacgatggcc gactggcact atgccgacgg
     2221 cgccaagtac ctcccgtccg acgcggaggt gaagaagctc cggccgcagc aatgagcggg
     2281 ctcgatctcg ccggacgccg cgcggtcgtc tgcggcggca gccgcggcat cggccgctcg
     2341 atcgccctgg gcttcgccgc cgccggcgcc gacgtctcga tctgcgcgcg cggcgccgag
     2401 acgctcgagc g
//
LOCUS       DASSYW010000279         2034 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_363771, whole genome shotgun sequence.
ACCESSION   DASSYW010000279 DASSYW010000000
VERSION     DASSYW010000279.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2034)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2034)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2034
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_363771"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1474)
                     /locus_tag="VFN38_04415"
     CDS             complement(<1..1474)
                     /locus_tag="VFN38_04415"
                     /inference="COORDINATES: protein motif:HMM:TIGR01525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042625 - ATPase-coupled ion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HET9011031.1"
                     /translation="MFRDRFWVSLALTVPTLVWGHMLPRVLGYAPPHLPGARWLAPAF
                     GTAVFLYGGLTFLQGAWRELRDRLPGMMTLIALAITVAFVFSAAVTLGYPGMPLWEEL
                     ATLVTIMLLGHWIEMRSITQAQGALRELAKLLPNAALRLRDGEVEEVPITALRPGDLV
                     LVRPGASVPVDGTVTEGESEVNESMITGESRPVKKGQGGRMIAGTVNGAGSLRVQVTG
                     TGEHTALAGIMRLVEQAQTSRSRAQALADRAAFGLTLAAIVAGALTFGVWMAVRGDPA
                     FAVERLVTVLVISCPHALGLAVPLVIAISTTLGARGGLLVRDRRGLEEARNLTAVVFD
                     KTGTLTKGEFGVVGTVTGGEFDEREALRLAAAVERDSEHTIAQGIVRSAKERGVAPPA
                     ATDFQAIPGVGVRARVEGRSLLIGGPALLKARSLEPPAALRAAADEAGRRGQAAVFLI
                     EDSGEGSGGRVLAVFSVADVVRPESKPAVEELHELRMKVIM"
     gene            1484..1633
                     /locus_tag="VFN38_04420"
     CDS             1484..1633
                     /locus_tag="VFN38_04420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011032.1"
                     /translation="MTRVLVVGSVSRVRVNAARRTMIALAVRLVVLVLGRMALMRVMV
                     VLAHW"
BASE COUNT          314 a          736 c          682 g          302 t
ORIGIN      
        1 gcatgatgac cttcatgcgc agctcgtgca gctcctccac cgccggcttc gactcggggc
       61 gcaccacgtc cgccacgctg aagaccgcaa gcactcgccc tccgctgccc tcgccggagt
      121 cctcgatcag gaagactgcc gcctgcccgc ggcggcctgc ctcatcggcc gccgcccgaa
      181 gggccgcggg cggctccagc gagcgagcct tgaggagcgc gggaccgcca atcaggagcg
      241 accgtccctc cacacgtgcg cgcactccca cgccgggaat ggcctggaag tccgtggcgg
      301 cgggtggcgc gacgccgcgc tccttcgcgg accggacgat gccctgcgcg atcgtgtgct
      361 ccgagtctcg ctcgaccgcg gcggccagcc ggagtgcctc gcgttcgtcg aactcgccac
      421 cggtgacggt gcccactacg ccgaactctc cctttgtcaa cgtcccggtc ttgtcgaaca
      481 cgacggccgt caggttgcgc gcctcttcca gcccacggcg gtcgcgtacc aggagaccgc
      541 cccgcgcgcc gagcgtcgtg gagatcgcga tgaccagagg aaccgcgagt ccgagcgcgt
      601 gggggcacga gatcacgagc acagtgacca gccgctccac cgcgaacgcc gggtccccac
      661 ggacggccat ccacaccccg aacgtcagcg cgcccgcgac gatcgcggcg agggtgagcc
      721 cgaacgccgc ccggtcagcc agggcctgcg ctcgcgaccg cgaggtctgc gcctgctcga
      781 ccaggcgcat gatccccgcg agggcggtgt gctccccggt ccccgtcacc tgaacgcgga
      841 gggacccggc tccattgacc gtgccggcga tcatgcgtcc gccctggccc ttcttcacgg
      901 gcctcgattc gccggtgatc atggactcgt tcacctcgct ctcaccctcg gtgaccgtgc
      961 cgtcgacggg gacgctcgcg cccgggcgca ccaggaccag gtcgccaggc cgaagcgccg
     1021 tgatcggcac ttcctcgacc tcgccgtccc gcaggcggag cgccgcgttc ggcaggagct
     1081 tcgccaactc gcgcagcgcc ccctgcgcct gcgtaatgga gcgcatctcg atccagtggc
     1141 ccaggagcat gatcgtgacg agcgtcgcca gttcctccca cagcggcatt cctggatacc
     1201 cgagcgtgac ggcggcactg aagacgaacg cgaccgtgat ggctagcgcg atcagcgtca
     1261 tcatcccggg caggcggtcg cgcagctcgc gccacgcacc ctggaggaag gtcaggccgc
     1321 cgtagaggaa caccgccgtg ccgaatgcgg gagcgagcca gcgagcacca ggcaggtgcg
     1381 gcggggcgta ccccagcacc cgcgggagca tgtggcccca cacgagggtc gggaccgtca
     1441 gcgcgagcga gacccagaac ctgtcgcgga acatcgcgac gctatgaccc gcgtgcttgt
     1501 cgtgggcagc gtgtcccgcg tgcgcgtcaa tgccgccagg aggacgatga tcgccttggc
     1561 cgttcgtctc gtggtgctcg tgctcggtcg catggccctg atgcgcgtga tggtggtgct
     1621 cgcccattgg tgacactcca tccggtttcc atatgatcgg cgccgcgcgg agtcccctgg
     1681 tggtcgtagt acaggcccac ctccccgcgg tcgtggagcg gagggagagg ggcacccgga
     1741 atgaggggcg aagaggagca cctggagggt gccgtccgca gcgtccttga agagtacgac
     1801 cggggccacc ctggtggcgg atcgggcgcc ggcggcgggc caaacgccgg cgtccttcac
     1861 ccagatctcc agaatccgag catcgaccgt ccgcgaccgg ctcacgtaaa cgtcgtcgta
     1921 gtgtctactc tgcacttgtc cacgcgggac tggagtcgtg ggcgtttgag tcttgagcaa
     1981 aggctagccg ctccgctctt gtcatcagta tgccgtcagt gcgcacgtcc gtga
//
LOCUS       DASSYW010000280         2828 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1373461, whole genome shotgun sequence.
ACCESSION   DASSYW010000280 DASSYW010000000
VERSION     DASSYW010000280.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2828)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2828)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2828
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1373461"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..982
                     /locus_tag="VFN38_04425"
     CDS             <1..982
                     /locus_tag="VFN38_04425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011033.1"
                     /translation="FAYGSAVFVIHHQTDRTMPLTTIRRAGRASLTLAATFALAGCST
                     TGATFRSGVGDSFPDRPPYRAGAPAGATAGTRVAILPVAYQRGASQADIFDPSAAPAT
                     PISALLAEMNAYVDSLTRAAGGGLVVRIAAPAGLPPDVRFGCVQDASDDCAHPSDPGP
                     AVRSFETEQPRMRLAVGRPSPVWIASAATALERSGAQHALVLTLEVGQYWVTKTGWTN
                     RKSIELGTNYSVPLPWLTSLESPVNVLQLTGALMDRDGLAVRIGAEGLLARRTSLVMS
                     GMGAQALISDDDVQQLRTLRREDLEGKPLVWQVALRQLVTDLSAVPISAP"
     gene            1136..1936
                     /locus_tag="VFN38_04430"
     CDS             1136..1936
                     /locus_tag="VFN38_04430"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HET9011034.1"
                     /translation="MNRLRQQLTRVRARAAFPVLGIAMSLATLVAGLERTSFLGEAAG
                     VEQVGSESVASSTVEAIKADLATLTGTGSSAASYATLDTDVSHARIDKWVTRLTTSLR
                     GDFKQSLQRMAKYEDMINAKIDARGMPRELIYVALIESNFNPTAKSPVKAVGMWQFMS
                     ATARQFGLSVGRRVDERKNPALATDAALAYLDQLHDRFGSWYLAAAAYNSGQGTVSKA
                     MRTVTGRTKGTDADFFRIMSKLPKETQDYVPKLIASARVGADPARYGM"
     gene            complement(1986..2219)
                     /locus_tag="VFN38_04435"
     CDS             complement(1986..2219)
                     /locus_tag="VFN38_04435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011035.1"
                     /translation="MRITHTMRHRAARRHIPAVCMTSIVIAFTPVPTVTVGQAPRSAS
                     APEHGAYAVTVRLCVPLDRCGSLTAHVPATLIP"
     gene            complement(2301..>2828)
                     /locus_tag="VFN38_04440"
     CDS             complement(2301..>2828)
                     /locus_tag="VFN38_04440"
                     /inference="COORDINATES: protein motif:HMM:NF012920.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S24 family peptidase"
                     /protein_id="HET9011036.1"
                     /translation="RARLLARQSGVGIVESSPRFIVPARADLPAAVAEEAQAAGAVAC
                     VDLAAAAGAGRELWDEPAERWVVLPPGVPRLHALALRIAGESMAPLLRSGDTVLVELG
                     TSLARGRVVVARHPGVEDGYLCKRVERVSRRELLLASLDPAYGTVTIPRDERLIVGTV
                     RLVWRGACPVPATTK"
BASE COUNT          437 a          985 c         1015 g          391 t
ORIGIN      
        1 gttcgcgtac ggctccgccg ttttcgtgat ccaccaccag accgatcgca ccatgcccct
       61 cacgacgatc aggcgcgccg ggcgcgcctc actcacgctc gcggcaacgt tcgctctcgc
      121 cggctgctcg actaccggag ccacctttcg gagcggggtc ggcgacagct tccccgaccg
      181 gcctccctac cgcgccggcg cgccggcggg cgccaccgcc gggacgcggg tcgcgatcct
      241 gccggtcgcc tatcagcgcg gcgcgtcgca ggcggacatc ttcgatccct ccgcggcgcc
      301 ggccacgccg atctccgcgc tgctggccga gatgaacgcc tacgtcgact cgctcaccag
      361 ggcggcgggg ggcgggctgg tggtgcgaat cgccgcgccg gccgggctgc cgccggacgt
      421 ccgcttcggg tgcgtgcagg acgcgagcga tgattgcgcc catccgtcgg acccggggcc
      481 cgccgtccgg agcttcgaga ccgagcagcc gcggatgcgg ctcgccgtgg gacgcccgtc
      541 gcccgtctgg atcgcctcgg cggcgaccgc gctggagcgg agcggggcgc agcacgctct
      601 cgtgctcacc ctggaggtcg gccagtactg ggtgacgaag accgggtgga ccaaccgcaa
      661 gtcgatcgag ctggggacca actactccgt gcccctcccc tggctcacgt cgctcgagtc
      721 gccggtgaac gtcctccagc tcaccggcgc cctgatggat cgcgacgggc tggcggtacg
      781 catcggcgcc gaggggctgc tggcgcggcg cacctcgctc gtgatgagcg ggatgggagc
      841 gcaggcgctg atcagcgacg acgacgtgca gcagctccgc accctccgcc gggaggatct
      901 cgagggcaag ccgctggtgt ggcaggtggc gctcaggcag ctggtgaccg acctgtcggc
      961 agtgcccatt tcggcgccct gaagctccag ctccggctgg ctgaccgtat ggtcagttct
     1021 gactattcgg tcagtatcta ggcgagctca tgggaaccgg gggcgagagc gcaagactgc
     1081 aatcaagggt cgttcgggct aacttcaatt acgtcaaagt gatggaggtt ggaccttgaa
     1141 tcgactacga cagcagctca cgcgcgttcg tgcacgcgcc gccttccccg tgctcggcat
     1201 cgccatgagc ctggccacgc tggtggccgg cctggagcgc acctccttcc tgggagaggc
     1261 cgcgggcgtg gagcaggtgg gaagcgaatc agttgcgagc tcgactgtag aggcgatcaa
     1321 ggccgacctc gcgacactca ccggaacggg gagctcggcg gcctcgtacg cgacgctcga
     1381 caccgacgtg agccatgcgc gaatcgacaa gtgggtgacc cgcttgacga cctcgctgcg
     1441 cggcgacttc aagcagtcgc tgcagcggat ggccaagtac gaggacatga tcaacgccaa
     1501 gatcgacgcc aggggaatgc cgcgcgagct gatctacgtg gcgctgatcg agtcgaactt
     1561 caatccgacg gccaagtcgc cggtgaaggc ggtggggatg tggcagttca tgagcgcgac
     1621 ggcgcgccag ttcgggctgt cggtgggccg ccgggtggac gagcgcaaga atccggcgct
     1681 ggccacggat gcggcgctgg cctatctcga ccagctgcac gaccgcttcg gctcgtggta
     1741 cctggccgcg gcggcgtaca actcgggaca gggcacggtg tccaaggcga tgcgcaccgt
     1801 gacgggcagg acgaagggaa cggacgcgga cttcttccgc atcatgtcga agctgccgaa
     1861 ggagacccag gactacgtgc cgaagctcat cgcgtcggcg cgcgtggggg ccgatccggc
     1921 caggtacggg atgtgagcga ccgacatccg cacgaagggc gcgccgatcg gcgcgccctt
     1981 cgtcgttacg ggatgagtgt cgccgggacg tgcgccgtga gggacccgca cctgtcgagc
     2041 gggacgcaga gccgaaccgt caccgcgtag gcgccatgct ccggcgcgga ggcgcttcgg
     2101 ggcgcctggc ccaccgtgac cgtcggcacg ggggtgaacg cgatgacgat ggacgtcatg
     2161 cagacggcgg gaatgtgccg gcgtgcggcg cggtgccgca tcgtgtgggt gatgcgcatg
     2221 gaacgatgtc ctccaggtgg tgcgtcgcgc gcgcggccgg cgacctcgtg tcgccatcgc
     2281 gccgcacgcg cgagtcgtcg tcacttggta gttgccggca ccggacacgc gccacgccac
     2341 accagacgca cggtgcccac gatcagccgc tcgtcccgcg gaatggtgac ggtgccgtac
     2401 gccggatcga gcgacgcgag gagcagctcc cggcggctca cgcgctccac ccgcttgcac
     2461 aggtagccgt cctcgacacc gggatgccgc gccaccacga cgcgcccgcg cgcgagcgag
     2521 gtcccgagct ccacgagcac ggtgtcgccc gagcgcagca gcggcgccat gctctccccc
     2581 gcgatgcgga gcgcgagcgc gtgcaggcga ggcacgcccg gaggcaacac cacccagcgc
     2641 tccgcgggct cgtcccacag ctcgcgaccc gcgccggcgg cggcggcgag atccacgcag
     2701 gccaccgccc cggccgcctg cgcctcctcc gcgaccgctg ccggcaggtc cgctcgcgcg
     2761 ggaacgatga agcgcggcga cgactccacg atgccgacgc cactctggcg cgcgaggaga
     2821 cgcgcgcg
//
LOCUS       DASSYW010000281         2046 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_352252, whole genome shotgun sequence.
ACCESSION   DASSYW010000281 DASSYW010000000
VERSION     DASSYW010000281.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2046)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2046)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2046
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_352252"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1760
                     /locus_tag="VFN38_04445"
     CDS             <1..1760
                     /locus_tag="VFN38_04445"
                     /inference="COORDINATES: protein motif:HMM:NF020083.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="helicase-related protein"
                     /protein_id="HET9011037.1"
                     /translation="ARVTPGRTTLVFTNTRGATERLAHRLRERFADEDVAAHHSSLAR
                     EERFAVEDRLRAGALRVVVSSTSLELGIDIGTVDEVILVSSPRDVTRALQRIGRSGHR
                     IDRHPRGRFIGTGVDDLLECLVVSDRCRAGELDPVRVPVAPLDVLAQQLVGMAAVARW
                     RDADAYALVRRAAPYADLSRDDFNQVLDYLSDASETMEERRVYAKLVRSEGAFEARGR
                     SVATIFYQNVGTIAGGASVRIKTRGSSTPIGTVEEDFLEQLRPGDRFLLGGRVWAFMF
                     AQGMTAFVAPAAGRPSVPRWASENLPATPCVAWGVGVLRALLRDAVVIGGADAVMQLL
                     SLRYHIERPDAEALAEYLATQHALSAIPDPDEVLIERWVDPDDDRVMVHAVTSPLGRR
                     ANDALARGIAYRLGKGSVGLMVDDQAFALRVPRRAAWDEAALPRLFDPAGLREDVRAA
                     VARSDLWGRRFRAVAAVGLMLVKNYHGRSKFVGAMQMNARRIWSVLERERPDFPLVRE
                     TYRTVLDDDLDVPTAAAWLERARGRVTLRELDGPPPFLFRLVAAGTTDSMLLEERDAF
                     LRRLWERATASSAAAAAID"
     gene            1780..>2046
                     /locus_tag="VFN38_04450"
     CDS             1780..>2046
                     /locus_tag="VFN38_04450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011038.1"
                     /translation="MEVAPGLRLTGDGAAWLPAMRTLVVADVHVGYELAAQRRGGYLP
                     PGERGAVVGAHLAAIMGELAATRLVVAGDLRHSTRDVDDFERIEL"
BASE COUNT          247 a          710 c          777 g          312 t
ORIGIN      
        1 ccgcgcgggt cacgcccggg cgcaccacgc tcgtgttcac gaacacgcgc ggcgcgacgg
       61 agcggctggc gcatcggctg cgcgagcgct tcgccgacga ggacgtggcc gcgcatcatt
      121 cgtcgctcgc ccgggaggag cgcttcgccg tcgaggatcg gctgcgggcc ggcgcgctgc
      181 gcgtcgtcgt ctcgtccacc tcgctcgagc tgggaatcga catcggcacc gtcgatgaag
      241 tgatcctcgt gagctcaccg cgcgacgtga cgcgggcact gcagcggatc ggtcgctcgg
      301 ggcatcgcat agatcggcat ccgcgcggcc gcttcatcgg cacgggcgtg gacgacctgc
      361 tcgaatgcct ggtcgtgagc gaccgctgcc gggccggcga gctggatccg gtgcgcgtgc
      421 ccgtggcgcc gctcgacgtg ctggcccagc agctcgtggg catggcggcc gtggcgcgct
      481 ggcgcgatgc cgacgcgtat gcgctcgtgc gccgcgccgc gccctacgcc gacctctcac
      541 gcgacgattt caatcaggtg ctggactacc tgtccgacgc cagcgagacg atggaggagc
      601 ggcgcgtcta cgcgaagctc gtccggagcg agggggcctt cgaggcgcgc ggccgctcgg
      661 tggccacgat cttctaccag aacgtgggca cgatcgccgg cggcgcctcg gtgcgcatca
      721 agacgcgcgg ctcgagcacg ccgatcggga ccgtcgagga ggacttcctg gaacagctcc
      781 ggcccggcga ccgcttcctg ctcggcggcc gggtgtgggc cttcatgttc gcgcagggga
      841 tgacggcgtt cgtcgccccg gcggcgggcc gcccgagcgt gccgcgctgg gcgtcggaga
      901 atctccccgc cacgccctgc gtggcgtggg gcgtcggcgt gctgcgcgcg ctgctgcgcg
      961 acgcggtcgt gatcggcggg gcagacgcgg tgatgcagct gctttcgctg cgctaccaca
     1021 tcgaacggcc tgacgccgag gcgctcgccg agtacctcgc gacgcagcac gcgctgtcgg
     1081 ccatcccgga tccggacgag gtgctgatcg agcgctgggt cgatcccgac gacgaccgtg
     1141 tgatggtgca cgccgtcacc agtcccctgg gacggcgtgc gaacgacgcc ttggcgcggg
     1201 gcattgcgta tcgactgggg aagggcagcg tggggctgat ggtcgacgac caggccttcg
     1261 cgttgcgcgt gccgcgccgt gccgcatggg acgaggccgc gctgccgcgc ctgttcgatc
     1321 cggccggcct gcgcgaggac gtgcgcgccg ccgtggcgcg atccgatctc tgggggcgcc
     1381 ggttccgtgc ggtggccgcc gtggggttga tgctcgtgaa gaactatcac ggccgctcga
     1441 agttcgtggg cgcgatgcag atgaacgcgc ggcgcatctg gtcggtgctc gagcgcgagc
     1501 gccccgactt tccgctcgtg cgcgagacgt atcgcaccgt gctggacgac gacctcgacg
     1561 tgccgaccgc cgcggcgtgg ctcgagcgcg cgcgcggccg cgtgacgctg cgcgagctcg
     1621 acggaccgcc gcccttcctg ttccgtctcg tcgcggccgg cacgaccgat tccatgctgc
     1681 tggaggagcg cgatgccttc ctccgccggc tgtgggagcg cgccacggcc tcgagcgccg
     1741 ccgccgcggc catcgactga gcgatcgttg cgtcgctgga tggaggtcgc gccggggctg
     1801 cgtctcacgg gagacggcgc cgcgtggcta ccggcgatgc ggacgctcgt cgtcgcggac
     1861 gtgcacgtgg gttacgagct cgcggcgcag cgtcgcggcg gctatctgcc gccgggggag
     1921 cgcggcgcgg tggtgggcgc acacctcgcc gcgatcatgg gtgagctggc agcgacgcgt
     1981 ctcgtcgtcg ccggcgatct ccgtcactcc acccgagacg tggacgactt cgagcgcatc
     2041 gagctc
//
LOCUS       DASSYW010000282         2644 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_544123, whole genome shotgun sequence.
ACCESSION   DASSYW010000282 DASSYW010000000
VERSION     DASSYW010000282.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2644)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2644)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2644
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_544123"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1743
                     /locus_tag="VFN38_04455"
     CDS             <1..1743
                     /locus_tag="VFN38_04455"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HET9011039.1"
                     /translation="PLFDPEQSTQSFKDITILKGDVDAAIARADVIVEGTYRTGHQEH
                     VYIETNGVIAVPEDDGITVYGSLQCPFYALKALKSLFGASAKVRVVQTETGGGFGGKE
                     EYPSMIAGHAALLAHKSGRPVKIIYDRVEDMVATTKRHPSIVRHRTGLTRDGKLVAMD
                     VNVLLDGGAYSTLSGVVLSRGCIHAAGPYRCDDIRIVGRAMMTHTPPNGAFRGFGAPQ
                     TEFAVEVHMERIAEALGMDSITLREMNALKPGDRTATGQLLREDASALECLSEAVRRT
                     DYRAKRERYRGTHKGIGLALFFHGAGFTGAGEERLKSKARLDLTPTGAKILVASTEIG
                     QGTRTMHAQIVADALGIPYESIEVAQPDTALVADSGPTVASRTCMIVGKILERCAIEM
                     KRTLGGMSPAEYYRAKGPLSVTMEHVPPDWIRWNDDTYQGDAYPTYAWGCDVVELDLD
                     PDTYEVRPTHVTVVQEFGRPIHPALAQGQIEGGTVQGLGYALLEHVVMRDGAMANSTL
                     TNYTIPTTLDTPPMDIVMLENHYDGGPFGAKGLGELPMDGPAPAVVNAIRHLGLDLRE
                     IPALPETLLTCASR"
     gene            1728..2156
                     /locus_tag="VFN38_04460"
     CDS             1728..2156
                     /locus_tag="VFN38_04460"
                     /inference="COORDINATES: protein motif:HMM:NF013923.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HET9011040.1"
                     /translation="MRFTLNGAPADVGAHPMKRLLDVLREECGLTGTKEGCGEGECGA
                     CTVLIDGAPVCSCLVPFAQAENAAVVTIEGLGDGHALQRCFMDEVGAQCGICTPGMIM
                     AACVLAPGASLDDIKVGLAGNLCRCTGYSAIYRAVQAAQS"
     gene            2153..>2644
                     /locus_tag="VFN38_04465"
     CDS             2153..>2644
                     /locus_tag="VFN38_04465"
                     /inference="COORDINATES: protein motif:HMM:NF013134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD binding domain-containing protein"
                     /protein_id="HET9011041.1"
                     /translation="MKTALSTLELRRAHTLDDALAIMRSEHRVPIAGATDVYVGLNFG
                     TVRAKRFLDIWPLDELRTISVVEDRLVLGALVTYTAMIESAEVRARLPMLIEAARQVG
                     GPQIQNRGTIGGNIANGSPAGDSLPVLAATDAVVVLRSVDGERRVPFTAFYTGYRATV
                     MRAD"
BASE COUNT          438 a          914 c          913 g          379 t
ORIGIN      
        1 ccgctgttcg accccgagca gtccacccag tcgttcaagg acatcacgat cctcaagggc
       61 gacgtcgacg ccgcgatcgc gcgcgccgac gtgatcgtcg aggggacgta ccgcaccgga
      121 catcaggagc acgtctacat cgagaccaac ggcgtgatcg ccgtacctga ggacgacggc
      181 atcacggtgt acggctcgct ccagtgcccg ttctatgcgc tcaaggcgct caagagcctc
      241 ttcggcgctt ccgcgaaggt gcgcgtggtg cagacggaga cggggggcgg cttcggcggc
      301 aaggaggagt acccgtcgat gatcgccggc cacgccgcgc tgctcgcgca caagtcgggg
      361 cggccggtga agatcatcta cgaccgcgtg gaagacatgg tggcgacgac caagcgccat
      421 ccctccatcg tgcggcatcg caccggacta acgcgcgacg ggaagctcgt cgcgatggac
      481 gtgaacgtcc tgctcgacgg cggcgcatac agcacgctga gcggcgtggt gctctcgcgt
      541 ggttgcatcc acgccgccgg gccctatcgc tgcgacgaca tccgcatcgt cggccgggcg
      601 atgatgacgc acaccccgcc caacggcgcc ttccgcgggt tcggcgcgcc gcagacggag
      661 ttcgccgtcg aggtgcacat ggagcgcatc gcggaagcgc tcggcatgga ctccatcaca
      721 ctgcgcgaga tgaacgcgct gaagccgggc gatcgcacgg ccaccggcca gctcctgcgc
      781 gaggatgcga gcgcgctcga gtgtctcagc gaagcggtgc gacggacgga ctaccgcgcg
      841 aagcgcgaac ggtatcgcgg cacacacaag ggcatcgggc tcgcgctttt cttccacggt
      901 gccgggttca ccggcgcggg ggaggaacgg ctcaagtcga aggcccggct cgacctcaca
      961 ccgacggggg cgaagatcct cgtcgcctcg accgagatcg gccagggcac gcgcacgatg
     1021 cacgcccaga tcgttgccga cgcgctcggc ataccgtatg aaagcatcga ggtcgcgcag
     1081 ccggacacgg cgctcgtcgc cgacagcgga ccgaccgtcg ccagccgcac gtgcatgatc
     1141 gtcggcaaga tcctcgagcg ctgcgccatc gagatgaagc gcacgctcgg cggcatgtcg
     1201 cccgcggagt actaccgcgc gaagggaccg ctgtcggtga cgatggagca cgtccccccc
     1261 gactggatcc gctggaacga cgacacctac cagggcgacg cctatcccac gtacgcctgg
     1321 ggatgcgacg tggtggagct cgacctcgat cccgacacct atgaagtgcg gccgacgcac
     1381 gtcaccgtcg tgcaggagtt cggacgcccc atccaccccg cgctcgcgca ggggcagatc
     1441 gaggggggta cggtgcaggg gctgggctac gcgctgctgg agcacgtcgt gatgcgggac
     1501 ggcgcgatgg ccaactccac gctcaccaac tacacgatcc cgaccacgct cgacacgccg
     1561 ccgatggaca tcgtgatgct ggagaaccac tacgacggtg gcccgttcgg cgcgaagggg
     1621 ctcggcgagc tgccgatgga cggacccgca cccgcggtcg tcaacgccat ccgccatctg
     1681 gggctcgacc tccgcgagat ccccgccctt cccgagacgc tcctcacgtg cgcttcacgc
     1741 tgaacggcgc gccggcggac gtcggcgcgc atcccatgaa gcggctgctc gacgtgcttc
     1801 gcgaggagtg cggcctcacg ggcacgaagg aaggctgcgg cgagggtgag tgcggcgcgt
     1861 gcacggtgct gatcgacggc gcgccggtct gctcctgcct cgtgccgttc gcgcaggccg
     1921 agaacgccgc ggtcgtcacg atcgaggggc tcggtgacgg tcacgcgctg cagcgctgct
     1981 tcatggacga agtaggggcg cagtgcggga tctgcacgcc cggcatgatc atggccgcct
     2041 gtgtgctcgc ccccggtgcc tcgctcgacg acatcaaggt cggcctggcg gggaatctct
     2101 gccgctgcac cggctactcg gcgatctacc gcgccgtgca ggcagcgcag tcgtgaagac
     2161 cgccctctcc accctcgagc tgcgccgagc gcacacgctg gacgatgcgc tggcgatcat
     2221 gcgcagcgag catcgcgtgc cgatcgccgg ggcgacggac gtctacgtcg ggctcaactt
     2281 cggcacggtg cgcgcgaagc gctttctcga catctggccg ctcgacgagc tgcgcacgat
     2341 ctcggtggtg gaagaccgcc tcgtgctcgg cgcgctcgtc acctacaccg ccatgatcga
     2401 gtcggccgag gtgcgtgcgc ggctgccgat gctgatcgag gcggcgcggc aggtgggcgg
     2461 cccgcagatc cagaaccgcg gcacgatcgg cggcaacata gccaacggct cgcccgcggg
     2521 cgactcgctt cccgtgctcg cggcgaccga tgccgtcgtc gtgctgcgga gcgtggatgg
     2581 ggagcggcgt gttcctttca cggccttcta caccggctac cgagcgaccg tgatgcgcgc
     2641 cgac
//
LOCUS       DASSYW010000283         2170 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1692750, whole genome shotgun sequence.
ACCESSION   DASSYW010000283 DASSYW010000000
VERSION     DASSYW010000283.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2170)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2170)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2170
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1692750"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(64..1284)
                     /locus_tag="VFN38_04470"
     CDS             complement(64..1284)
                     /locus_tag="VFN38_04470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HET9011042.1"
                     /translation="MSFALRAIATGSLAVLAALPALAQAVPAATPADSAADPVRELVG
                     RLDLERYKATVKGLTKFGDRRQGTARNRAALDWIEAQLKSYGCTPTERITYDFQPPPP
                     RQPGAAPAGPRPVTTQAQGGGRLRGTRRPTGVNNDSLRQPDPALRALNREQSVAGERQ
                     EVYCTKVGETRPDEMYIVGAHMDGIGWGEAANDDGSGTAIVMELARIFSHAEVKTERS
                     IRFVLWNNEESGLNGARAYIAQRQALQGKESPAGSGRYPEPRWLGMIQHDMMMFDHGM
                     PRADGTLSPQQRPEADVNVEFQSNSKMAAESQKLAWLFATANEKYASDYPVAVGQHMT
                     NTDSAPFQDLVPAISLRENERGAQIGAGWDPQWHQPTDLYSTYGDADFRLALNAAQTT
                     LGAVALLTGARLAR"
     gene            complement(1330..>2170)
                     /locus_tag="VFN38_04475"
     CDS             complement(1330..>2170)
                     /locus_tag="VFN38_04475"
                     /inference="COORDINATES: protein motif:HMM:NF012892.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cation transporting ATPase C-terminal
                     domain-containing protein"
                     /protein_id="HET9011043.1"
                     /translation="APALKTADIGVAMGLSGTDVSREAADIVLADDDFATIVAAVEEG
                     RAIFANVRKFLRYLLSSNNGEVLTMFFGVVLADRIGLAADRGAVVLPLLAAQILWINL
                     VTDGAPALALGVDPADEGLMLRPPRPAAEGVITPRMWRGIFFVGVVMAAGTLFVLDAA
                     LPGGLVEGTGDLPYAQTMAFTTLMLAQLFNTLNARSDERSAFAHLFANRRLWAGIALS
                     LVLQVVVLYVPAMQRAFGTVGLEWTDWLRCAAVASAVLWLREAGKLVARRRAVPAVAR
                     PAP"
BASE COUNT          293 a          804 c          751 g          322 t
ORIGIN      
        1 ttcgatgcaa ctcccacccc ccttccacgg gcgtgcccgc gcccggcagg cgccgcgcgg
       61 ccgtcagcgc gccagccgag cccccgtcag cagcgccacg gcgcccaggg tggtctgggc
      121 cgcgttgagc gcgagccgga agtccgcgtc gccgtacgtc gagtacaggt cggtgggctg
      181 gtgccattgc gggtcccacc cggcgccgat ctgtgccccg cgctcgttct cgcgcaggct
      241 gatggcgggc acgagatcct ggaagggggc cgagtcggta ttcgtcatgt gctgacccac
      301 cgcgaccggg tagtcgctgg cgtacttctc gttcgccgtg gcgaacagcc aggccagctt
      361 ctgcgactcc gccgccatct tcgagttcga ctggaactcg acgttcacgt ccgcttccgg
      421 ccgctgctgc gggctcaacg tgccgtcggc gcgtggcatg ccgtggtcga acatcatcat
      481 gtcgtgctgg atcatgccca gccacctggg ctcgggatac cgccccgagc cggccggcga
      541 ttccttgccc tgcagcgcct gccgctgcgc gatgtatgcg cgcgcgccgt tcaggccgga
      601 ctcctcgttg ttccacagca cgaaccggat cgaccgctcc gtcttcacct ccgcgtggct
      661 gaagatccgc gccagctcca tcacgatcgc cgtccccgag ccgtcgtcgt tggccgcctc
      721 gccccagccg atcccgtcca tgtgggcgcc gacgatgtac atctcgtcgg gacgcgtctc
      781 accgaccttc gtgcagtaga cttcctgccg ctcgccggcg acgctctgct cgcggttcaa
      841 cgcgcgcagc gccggatccg gctgccgcag cgagtcgttg ttcacgccgg tgggacggcg
      901 ggtgccacgc aggcgcccgc cgccctgcgc ctgggtggtc acgggacgcg gaccagccgg
      961 tgccgcgccc ggctggcgtg gcggtggggg ctggaagtcg taggtgatcc gctcggtggg
     1021 agtgcagccg tagctcttca actgggcctc gatccagtcc agcgccgccc ggttgcgcgc
     1081 cgtgccctgc cgtcggtcgc cgaacttcgt gagccccttc accgtcgcct tgtaccgctc
     1141 gaggtccagg cggccgacca gctctcgcac cggatcggcg gcgctgtccg ccggggtggc
     1201 cgccggaacc gcctgcgcga gcgcgggaag ggcggccagg acggcgagtg atccggtggc
     1261 gatggctcgg agcgcgaatg acatcgggtg tggtgggttg agcgtggatg agcggagccc
     1321 tgccagctac tacggtgcgg ggcgcgcgac cgctggcacg gcgcgccgcc gggcgacgag
     1381 cttgcccgct tcgcggagcc acagcaccgc gctcgcgacc gcggcgcacc gcagccagtc
     1441 cgtccactcg agccccaccg tcccgaatgc gcgctgcatg gccggcacgt acagcaccac
     1501 cacctggagg acgagcgaga gggcgatccc ggcccacagc cggcggttcg cgaacaggtg
     1561 ggcgaaggcg ctgcgctcgt cggagcgcgc attgagcgtg ttgaacagct gcgccagcat
     1621 cagcgtggtg aaggccatcg tctgcgcata gggcaggtcg ccggtcccct ccaccagccc
     1681 gccgggcagc gcggcgtcga gcacgaagag cgtgcccgcc gccatcacga ccccgacgaa
     1741 gaagatgccg cgccacatgc gcggcgtgat gaccccttcc gcggccggcc gcggcggtcg
     1801 gagcatcagc ccttcgtccg cggggtccac gccgagcgcc agcgccggcg ccccgtcggt
     1861 gacgaggttg atccagagga tctgcgccgc gagcagcggc agcaccaccg cgccgcggtc
     1921 cgccgcgagc ccgatccggt cggcgagcac cacgccgaag aacatcgtga gcacctcgcc
     1981 gttgttcgac gacaggaggt agcgcaggaa cttccggacg ttcgcgaaga tcgcccgacc
     2041 ctcctccacc gccgcgacga tcgtcgcgaa gtcgtcgtcg gcgaggacga tgtcggccgc
     2101 ctccctggaa acgtcggtcc cgctgagccc catcgccacg ccgatgtccg ccgtcttgag
     2161 cgccggcgcg
//
LOCUS       DASSYW010000284         2445 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1627070, whole genome shotgun sequence.
ACCESSION   DASSYW010000284 DASSYW010000000
VERSION     DASSYW010000284.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2445)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2445)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2445
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1627070"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(127..417)
                     /locus_tag="VFN38_04480"
     CDS             complement(127..417)
                     /locus_tag="VFN38_04480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011044.1"
                     /translation="MTQSQRTLQEYRSTLPPAEVLAQAKKFFTRRSSLYATFLDKEGP
                     GYATFRGQGGEEIVIAASAAEGATLVTGSTYLFDMQVARFFSTLPPFSVEVS"
     gene            complement(536..1876)
                     /locus_tag="VFN38_04485"
     CDS             complement(536..1876)
                     /locus_tag="VFN38_04485"
                     /inference="COORDINATES: protein motif:HMM:NF013736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing sensor histidine kinase"
                     /protein_id="HET9011045.1"
                     /translation="MSSSPLMSERPRATPESTESGVRELIAVREIVHAFLTADRPEEV
                     FQFALDRVSPLVGATFACVYLVDGASELMRLAAVHNWPARYTPFLGEMRVRLGFGPSG
                     EAAAERRVIEVPDVTADPSLEDWAEVAHELGFRAIVALPLQTGEGVLGAVAFYFEQAG
                     VITAETRSLLRMVADQMAATAQKARLIEDLRRANAALLETNAELEKQYGALLDARRVK
                     DEFLANISHELRTPLTAVMGYLALMDEGLAGPVTPEQRRTIAQVKTSSEHLLELIGDL
                     LELTTLKRGGLEVVASAFDVRDPLRDAVASTRGRADAVALRVSEPDAPAMMVSDRRKI
                     TKMLVALLSNAYKFTQSGEVRLSVEVLNGRAVYRVQDTGIGIADEMQQLVFEEFRQVD
                     GSSTRRFGGPGLGLSLARRLARLLGGEIFVQSAPGEGSTFRVELPLEYHDAERA"
     gene            complement(1933..>2445)
                     /locus_tag="VFN38_04490"
     CDS             complement(1933..>2445)
                     /locus_tag="VFN38_04490"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HET9011046.1"
                     /translation="DASAVARQLGGIEVDVLVNNAGVGVLKPFTELSAEEWHRMIDVN
                     VNALYHVTRAVLPGMFARKGGHVCTIGSVGGRSVFAGGTCYGATKAFVTSWAENLMIE
                     VRDKGVKVSVVMPGAVATGFNGNEPGEKDRWKLTPDDVAEAVAQVVLTPAHVLIHRLE
                     VRTLTVPGKK"
BASE COUNT          364 a          900 c          822 g          359 t
ORIGIN      
        1 acacggcgac gcgcacgacg tcccacacct cgggcatctc cacgcgcacc gtgatggcgt
       61 cggtgccggc ggcggccatc tggatcacgt cgccgcgcgt gcggagctgg gtcacgaagg
      121 gcgcgctcac gacacctcca ccgagaacgg cggcagcgtg ctgaagaagc gcgcgacctg
      181 catgtcgaag agatacgtgg agccggtaac cagcgtggcg ccctccgccg ccgaggcggc
      241 gatgacgatc tcctccccgc cctgcccccg gaaggtcgcg tagccggggc cttccttgtc
      301 gaggaaggtg gcgtacaggc tgctgcgccg cgtgaagaac ttcttggcct gcgccagcac
      361 ctcggcgggg ggaagcgtgg agcggtattc ctgaagcgtg cgctgcgact gggtcattga
      421 cggcgtcgga agaaacgcgg ggggagcggg cggacggcga ccgtggtggt tggacaccgc
      481 ccgccgcgtt ggcgatgggt gaagcttaat gaggttcgcc ggccagccgg gagggctatg
      541 cccgctccgc gtcgtgatac tcgaggggca gctcgacccg gaaggtcgag ccctcgcccg
      601 gcgccgactg cacgaagatc tcgccgccga ggaggcgggc gagccgccgc gcaagcgaca
      661 ggccgagtcc cggcccgccg aaccggcgcg tgctcgagcc gtccacctga cggaactcct
      721 cgaacacgag ctgctgcatc tcgtcggcga tgccgatgcc cgtgtcctgt acgcggtaca
      781 cggcgcgccc gttgagcacc tccaccgaga gccggacctc gccgctctgg gtgaacttgt
      841 acgcgttgct caacagggcg acgagcatct tggtgatctt ccgccggtcg ctcaccatca
      901 tcgcgggggc gtcgggttcg ctcacgcgca gggccaccgc gtcggcgcgt ccgcgcgtgg
      961 acgccacggc gtcgcggagc ggatcccgga cgtcgaacgc gctggcgacg acctcgagcc
     1021 cgccccgctt gagcgtggtg agctcgagca ggtcgccgat cagctccagc aggtgctcgc
     1081 tcgacgtctt cacctgcgcg atcgtccggc gctgctccgg cgtcaccgga ccggcgagcc
     1141 cctcgtccat cagcgccagg tagcccatca ccgccgtgag cggcgtgcgc agctcgtgcg
     1201 agatgttggc gaggaactcg tccttcacgc ggcgcgcatc gagcagcgcg ccgtactgct
     1261 tctccagctc ggcgttggtc tccagcagcg cggcgttggc gcgccgcagg tcctcgatca
     1321 gccgcgcctt ctgcgccgtc gcggccatct ggtccgccac catgcgcagc agcgagcggg
     1381 tctccgccgt gatcacgccc gcctgctcga agtagaaggc gacggcaccc agcacgccct
     1441 cgcccgtctg gagcggcagc gccacgatgg cgcggaaccc gagctcgtgg gccacctcgg
     1501 cccagtcctc gagcgaggga tcggcggtca cgtcgggcac ctcgatcacg cgtcgctccg
     1561 ccgccgcctc cccgctcggc ccgaatccga gccggacccg catctcgccg aggaacggcg
     1621 tgtagcgcgc gggccagttg tgcaccgcgg ccagccgcat cagctcactc gcgccgtcca
     1681 ccaggtagac gcacgcgaag gtggcgccga cgagcgggct cacccgatcg agggcgaact
     1741 ggaacacctc ctccggccgg tcggccgtga ggaaggcatg gacgatctcg cgtaccgcga
     1801 tcagctcgcg gaccccggac tccgtgctct ccggcgtcgc gcgcggccgc tcgctcatga
     1861 gcggagagga agacacgcgg gcaatatggg gacggaactc gctatgggcc agatgtttag
     1921 cccactccgc ccctacttct ttcccggcac ggtgagcgtg cgcacttcca gccggtgaat
     1981 cagtacgtgc gccggggtga gcaccacctg cgcgaccgcc tcggccacgt cgtccggcgt
     2041 cagcttccac cggtccttct cgccgggctc gttgccgttg aaccccgtgg ccaccgcgcc
     2101 cggcatcacc accgagacct tcaccccctt gtcccgcacc tcgatcatga ggttctccgc
     2161 ccacgacgtc acgaacgcct tcgtggcccc gtagcaggtg ccgcccgcga acacgctgcg
     2221 cccgcccacc gagccgatcg tgcagacgtg accgcccttc cgcgcgaaca tccccggcag
     2281 cacggcgcgc gtgacgtgat agagggcgtt cacgttcacg tcgatcatgc gatgccattc
     2341 ttccgccgag agctcggtga acggcttcag gacgccgacg ccggcgttgt tgacgaggac
     2401 gtcgacctcg atcccgccga gctgccgcgc caccgcgctc gcgtc
//
LOCUS       DASSYW010000285         2280 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_501213, whole genome shotgun sequence.
ACCESSION   DASSYW010000285 DASSYW010000000
VERSION     DASSYW010000285.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2280)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2280)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2280
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_501213"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2104
                     /gene="lon"
                     /locus_tag="VFN38_04495"
     CDS             <1..2104
                     /gene="lon"
                     /locus_tag="VFN38_04495"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HET9011047.1"
                     /translation="RFSDLVAGYIELPVAERQGLLENLNVEDRLRRVLVHVQRQIGMI
                     EMQEEIKSQVQEELGERQREMYLREQMKAIQKELGDDDQSKEISELREKLDKLELPPS
                     ARTEVERELGRLERAGRESMEAQVIRTYLEWIAELPWNTRSDDNLDLTRANQVLDEDH
                     YGLPDVKDRVLEFLAVRQLRAQEMAQEVEASGEVPVAAFKPERADATPVLNVTGEHRA
                     VKDTKEAKARAMAKGPILLFSGPPGVGKTSIAKSIARSLGREYERVALGGVRDEADIR
                     GHRRTYVGAMPGRIIQGLKQAKTRNPVFLLDEVDKLGTSFQGDPASALLEVLDPAQND
                     TFTDHYLGVPFDLSEVLFIATANFVQNIPGPLFDRMEAVEFAGYTEREKAEIAKKYLI
                     PRQLEDSGLKSKNIVFDDAAVMSIVSNYTRESGVRQLERQVGAVARKVARKLASGETD
                     DFHISVQDVRDLLGRPRVHPERANEENEIGVAAGMYYTPMGGDIMFVEAAIRRLHGAQ
                     RSSDGDDQKVQVSGWGNVSLILTGQLGDVMKESARAALTYAATHASALKIPEDRLGSI
                     EVHVHVPAGAIPKDGPSAGVAISTALVSAMSGRPVRRDVAMTGEATLRGRVLPIGGLK
                     EKVLGAHRAGITTIILPKDNEADMEDIPEEVRKQLSFHCVSTLDEAFAIALLPPVNGT
                     PPAAKPQIMEQAEAAVGA"
BASE COUNT          398 a          742 c          827 g          313 t
ORIGIN      
        1 gcgcttcagc gatctcgtgg ccggctacat cgagctgccg gtggccgagc gccaggggct
       61 gctcgagaac ctgaacgtcg aggatcgcct gcgccgcgtg ctcgtccacg tgcagcggca
      121 gatcggcatg atcgagatgc aagaggagat caagtcgcag gtgcaggagg agctcggcga
      181 gcgccagcgc gagatgtacc tccgcgagca gatgaaggcg atccagaagg agctgggcga
      241 cgacgaccag agcaaggaga tcagcgagct gcgcgagaag ctcgacaagc tcgagctgcc
      301 gccctcggcg cgcacggagg tggagcgcga gctggggcgc ctcgagcgcg ccggccgcga
      361 gtccatggag gcccaggtca tccgcacgta cctcgagtgg atcgccgagc tgccgtggaa
      421 cacccgcagc gacgacaacc tcgacctgac ccgcgcgaat caggtgctgg acgaggatca
      481 ctacgggctg cccgacgtga aggatcgggt gctggagttc ctggccgtgc gccagctgcg
      541 tgcgcaggag atggcgcagg aggtcgaggc atcgggcgag gtgccggtgg ccgcgttcaa
      601 gcccgagcgc gccgacgcca cgcccgtgct gaacgtgacc ggcgagcacc gcgccgtgaa
      661 ggacacgaag gaggcgaagg cccgcgcgat ggccaagggc cccatcctgc tcttctcggg
      721 accgcccggc gtgggcaaga cgtcgatcgc caagtccatc gcgcgatcgc tcggccgcga
      781 gtacgagcgc gtcgccctgg gcggcgtgcg cgacgaagcg gacatccgcg gacaccggcg
      841 cacctacgtg ggtgccatgc cgggccgcat catccaggga ctcaagcagg cgaagacgcg
      901 caatccggtc ttcctgctcg acgaggtgga caagctgggc acgtcgttcc agggcgatcc
      961 ggcgagcgcg ctgctcgagg tgctcgaccc cgcgcagaac gacaccttca ccgaccacta
     1021 cctcggcgtg ccgttcgacc tgagcgaagt gctgttcatc gcgacggcca acttcgtcca
     1081 gaacattccg ggaccgctct tcgatcgcat ggaggcggtg gagttcgccg gctacaccga
     1141 gcgcgagaag gcggagatcg ccaagaagta cctcattccg cgccagctcg aggactcggg
     1201 gctcaagagc aagaacatcg tgttcgacga cgccgccgtg atgagcatcg tgagcaacta
     1261 cacgcgcgag agcggcgtgc ggcagctcga gcgccaggtg ggcgccgtgg cgcgcaaggt
     1321 cgcgcgcaag ctggcctcgg gcgagaccga cgacttccac atcagcgtgc aggacgtgcg
     1381 cgacctgctc ggtcgtccgc gcgtccatcc cgagcgggcg aacgaggaga acgagatcgg
     1441 cgtggcggcg gggatgtact acacgccgat ggggggcgac atcatgttcg tcgaggcggc
     1501 gatccggcgg ctgcatggcg cgcagcgctc gtccgacggc gacgaccaga aggtgcaggt
     1561 gagcgggtgg gggaacgtgt cgctcatcct caccggccag ctcggcgacg tcatgaagga
     1621 gagcgcgcgc gccgcgctga cctacgcggc gacgcacgcc tcggccctga agatcccgga
     1681 ggatcgcctg ggatcgatcg aggtccacgt gcacgtgccg gcgggcgcga tccccaagga
     1741 cggcccgagc gcgggcgtgg ccatctcgac cgcgctcgtg agcgccatgt cggggcggcc
     1801 ggtccgtcgc gacgtcgcca tgaccgggga agccaccctg cgcgggcgtg tgctgccgat
     1861 cggcgggttg aaggagaagg tgctgggcgc ccatcgcgcc ggcatcacga ccatcatcct
     1921 gccgaaggac aacgaggcgg acatggagga catccccgag gaggtgcgga agcagctctc
     1981 cttccactgc gtgagcacgc tggacgaggc gttcgcgatc gccctgctgc ccccggtgaa
     2041 cggcacgccg ccggcggcca agccacagat catggagcag gctgaggcgg ccgtcggcgc
     2101 ctgatccgga gggggcctgc cgcgaagtgt gcggcaggcc cctatcgcgc ggtgacttgt
     2161 ggtgttacta ttggtttcag cgacgcaccc cgtgcttcgg cccgggggac ctagttccga
     2221 cggatcaggg gcctgctcat cgcgggtccc ttttttttct cacccgcgtc gctaccactg
//
LOCUS       DASSYW010000286         2212 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_370446, whole genome shotgun sequence.
ACCESSION   DASSYW010000286 DASSYW010000000
VERSION     DASSYW010000286.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2212)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2212)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2212
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_370446"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..793)
                     /locus_tag="VFN38_04500"
     CDS             complement(<1..793)
                     /locus_tag="VFN38_04500"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HET9011048.1"
                     /translation="MTARTLGKSGLRVSAIGCGCMGLSEFYGPMARADALAVLARARA
                     RGITHFDTADMYGRGENERLVGEAHRAHRHEIVLATKFGIVRGPGERRLDGRPAYVRD
                     ACEASLRRLQTDYVDLLYLHRVDPAVPIEDTVGAMGDLVRAGKVRALGLSKVDAATLA
                     RAEAVHPIAAVQMEYSIAARHVEVELLAACEQREVTLVAYSPLVKGLLAGRLTGVDHL
                     DEEDWRRDDPRFSDEAFASHRSLLQLLAVQADANGCSPAQLALAWL"
     gene            complement(790..>2212)
                     /locus_tag="VFN38_04505"
     CDS             complement(790..>2212)
                     /locus_tag="VFN38_04505"
                     /inference="COORDINATES: protein motif:HMM:NF012873.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="condensation domain-containing protein"
                     /protein_id="HET9011049.1"
                     /translation="DSLVAVALVGRLNTMLNATLRVSELFEAPTVEELTARLSRRVTT
                     APLPPIVRQTCRAAYPLSFGQRTVISPRNDVYPTRFNCPGSFRLGGVMDAGRLEHAFQ
                     ALIARHEILRSAIDVAGERQVVAASVPFELPVIGCPNAEVEQRRAEFVRPFDVSRAPL
                     LRAELLRVSANEHWLLFDAHHAVTDAVSLALMSRELFALYRDEVTAAPLLHYGDYAAW
                     QQQLVTSGAVAADAECRRAALDGFVWTELPTRTGGGTMQYDRVAVEMACGHRTELTAA
                     CERAGVTTITLVLASIAATVGRATGQHDVTLGLRVSHRSDARLERMIGTFAEDAACRI
                     RLSSRAPADIVADTRHALAAVVDHPFHPYDALNEEVQAQRPTPNGELFTIMVNYLPLI
                     GLSCREMCATFVAVPRAATSKYDVNLRLLDGARLRFEAKYRRDRHTPGQIAAWLQDIA
                     DTALRFARALQSPHVAAAAALVS"
BASE COUNT          360 a          769 c          778 g          305 t
ORIGIN      
        1 gcagccacgc gagggcgagc tgcgccggcg agcacccgtt cgcgtctgcc tgcaccgcga
       61 gcagctgcag caggctcctg tgcgacgcga aggcctcgtc gctgaagcgc ggatcgtcgc
      121 gacgccaatc ctcttcgtcg aggtgatcga cgcccgtgag gcggccggcg aggagccctt
      181 tgacgagcgg cgaataggcg acgagcgtca cctcccgttg ctcgcacgcg gcgagcagct
      241 cgacctccac gtggcgcgcc gcgatcgagt actccatctg aacggcggca atcgggtgca
      301 ccgcttcggc gcgcgccagg gtcgcggcat cgaccttcga caatcccagc gccctgacct
      361 tgccggcacg cacgagatcc cccattgcgc cgacggtgtc ctcgatcggc acggcggggt
      421 cgacgcgatg cagatacagc aggtcgacgt aatcggtctg caggcgccgc aggctcgcct
      481 cgcaggcgtc gcgcacgtag gccgggcggc cgtcgaggcg tcgctcgccg ggcccgcgca
      541 cgatgccgaa cttggtggca agcacgatct cgtgccggtg cgcacggtgg gcctcgccga
      601 cgagccgctc gttctcgccg cgaccgtaca tgtcggcggt gtcgaagtgc gtgatgccac
      661 gagcgcgagc acgcgcaagg accgcgaggg cgtcggcccg cgccatcggg ccatagaact
      721 ccgacagacc catgcagccg cagccgatgg ccgacacgcg gagaccgctc ttgccgagcg
      781 ttcgcgccgt catgacacca gggcagcagc cgccgcgacg tgtggacttt gcagcgcacg
      841 ggcgaagcga agggcggtgt cggcgatgtc ctgcaaccac gcggcgatct gcccgggtgt
      901 gtggcgatct cgccggtact tcgcctcgaa gcgcaggcgc gcgccatcga gcagccggag
      961 gttgacgtcg tacttcgacg tcgcggcacg cggcacggcg acgaacgtgg cgcacatctc
     1021 ccggcacgag agaccgatca gaggcagata gttgaccatg atggtgaaga gctcgccgtt
     1081 gggggtgggc cgctgtgcct gcacctcctc gttgagcgcg tcgtacgggt ggaaggggtg
     1141 atcgacgacc gccgccagcg cgtgtctcgt atcggccacg atgtcggccg gcgctcgcga
     1201 cgacagccgg atgcggcaag ccgcgtcctc ggcaaacgtg ccgatcatcc gctcgagcct
     1261 ggcgtccgaa cgatgcgaca ctcgcagacc gagcgtcacg tcgtgctggc cggtcgcgcg
     1321 acccaccgtg gccgcaatcg acgccagcac tagcgtgatg gtcgtgaccc cggcccgctc
     1381 gcaggcggcg gtgagctcgg tgcgatgccc gcacgccatc tcgacggcga cgcggtcgta
     1441 ctgcatcgtg cctccgccgg tccgggtcgg gagctcggtc cagacaaagc cgtccaacgc
     1501 ggcacgccga cactccgcgt cggccgccac ggcgccgctg gtcacgagct gctgttgcca
     1561 ggcggcgtag tcgccgtagt ggagcagcgg cgccgccgtc acctcgtcgc gatacagcgc
     1621 gaacagctcg cggctcatca gcgccagcga tacggcgtcc gtcaccgcgt gatgcgcatc
     1681 gaacagcagc cagtgctcgt tggccgacac ccgcagcagc tcggcgcgaa gcagcggcgc
     1741 gcgagagaca tcgaagggac ggacgaactc ggcgcgccgc tgctcgacct ccgcgttcgg
     1801 acacccgatc actgggagct cgaacgggac cgacgccgcc acgacctgtc gctcgccggc
     1861 gacgtcgatg gcgctccgaa ggatctcgtg ccgggcgatc agcgcctgaa acgcatgctc
     1921 gagacgaccg gcgtccatga cgccgccgag ccggaacgag ccgggacagt tgaaccgagt
     1981 gggatacacg tcgtttcgtg gtgagatcac cgtccgctgc ccgaacgaca gcggataggc
     2041 ggcccggcac gtctgccgca cgatcggcgg cagcggcgcg gtggttacgc ggcgcgagag
     2101 acgagccgtc agctcctcga cggtgggggc ttcgaacagc tccgagacgc gcagggtcgc
     2161 gttcaacatc gtgttgagcc ttccgacgag cgccacggcg acgagcgagt cg
//
LOCUS       DASSYW010000287         3494 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1498406, whole genome shotgun sequence.
ACCESSION   DASSYW010000287 DASSYW010000000
VERSION     DASSYW010000287.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3494)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3494)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3494
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1498406"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1061)
                     /locus_tag="VFN38_04510"
     CDS             complement(<1..1061)
                     /locus_tag="VFN38_04510"
                     /inference="COORDINATES: protein motif:HMM:NF025680.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /protein_id="HET9011050.1"
                     /translation="MKIFLKTSIRRAGLGALGALLLVPALTLFPACTNLTEVPKDALT
                     PENAFKTDQEVLAGVASVYASLRSTMWGWYNLSEITTDELVVPTRGQDWYDNGRWLEI
                     HKQTWTPNSGSALDDMNGTWNTLFSGVAKANLMIDVIEKAGGANKDVTLAELRTLRAW
                     YYYMLMDFFGGVPLVTSTELGTNARVSRDSVFRFVEAELNAVRTALPLSWPAAYRGRV
                     TRGAADAILASLYLNAQVFTGTVSTSGLTKGPARWADAIAAADRVINSGQYSLATDWK
                     KNFSTDNDDSPENIFFVAESSTPGLGMSIQMRGLHYNMLSPEPWNGFATLAETYRAFD
                     PADKRREIFLVGGPQKSYNT"
     gene            complement(1114..>3494)
                     /locus_tag="VFN38_04515"
     CDS             complement(1114..>3494)
                     /locus_tag="VFN38_04515"
                     /inference="COORDINATES: protein motif:HMM:TIGR04056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0071702 - organic substance transport
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="SusC/RagA family TonB-linked outer membrane
                     protein"
                     /protein_id="HET9011051.1"
                     /translation="VLKDASATAIYGSRGANGVILVQTRRRASGRPTVDYDVYVAAAT
                     PSRSLDFMTGDQYRTFVQQQVTAGKLPATQLASLGTANTNWEDALTRRGWTKSHNLSF
                     AGGSPATTYRASLNYFDQQGVVIENGLKRYQGRLNAQHEAFDGRLGLGLTLTASRVNN
                     DYLAMENGGGFSGGVFTNMAIFNPTQPVVDPVTGKYYEIGPGAQGTRNPVAIAEQVID
                     QAPENRVLGNLSGSFEVMPSLVARTTLGVDYSDAVRQTYFPIVSPIGAQFNGAARQAE
                     RSLQNLNFQQLLTFTPKVGERQEFDIVGGYEYSTFNNHGFEATAQGFVTDVFLWNNLG
                     AGTQASSPPPVSYIQESKLVSFFGRANYGYAEKYFLTGVVRRDGSSRLAEGNKWSVFP
                     AVSASWRLSNEDFMRGGMFSSLALRAGWGRQGNQAVRPYATQLLLRADEGSRYPFGSG
                     VTTGLVAAQVANPDLKWETSEQTNVGVDWGIRNDRFTGVLEFYQKTTKDLLLTVSVPQ
                     PAVVSTRIENIGAVRNRGFEATFDARLLEEPTRTLSSGLVMSVERGEVSNLGEGRNFI
                     ITGRVFGQGQSGRFGQRLIPGEPLGTFWGPKFLRVDGAGKQVFSCVATSAGCVNGETF
                     SPTGADEGIIGNANPSFSLGLHSNGTWNMFDASWNWRGEFGRDVFNNTALVYATKGNA
                     KQGRNFLASALDDPTGIDEPSIYSSRWIENGRFIRLQNVTVGYTFSLPQLGGRATRVY
                     LSGDNLLLFTPYSGYDPEVFTDANQDGIGTRGIDYLTYPRARTITTGVRLQF"
BASE COUNT          517 a         1170 c         1202 g          605 t
ORIGIN      
        1 gtgttgtagc tcttctgcgg accgcccacg aggaagatct cgcggcgctt gtcggccgga
       61 tcgaacgcgc ggtaggtctc ggcgagggtg gcgaagccgt tccacggctc cggcgagagc
      121 atgttgtagt gcaggccgcg catctggatg ctcatgccga gccccggcgt cgaggactcc
      181 gcgacgaaga agatattctc cggtgaatcg tcgttgtccg tgctgaagtt cttcttccag
      241 tcggtcgcca gcgagtactg gccggagttg atcacccggt cggcggcggc gatcgcatcg
      301 gcccagcggg cgggaccctt ggtgagcccg gacgtggaga ccgtgcccgt gaacacctgg
      361 gcgttgagat acaggctcgc caggatcgcg tcggccgcgc cgcgcgtcac ccggcccctg
      421 tacgccgcgg gccaggacag gggcagcgcg gtccgcaccg cgttcagctc cgcctccacg
      481 aaccggaaca ccgagtcacg cgacacgcgg gcgttcgtcc cgagctccgt cgacgtgacg
      541 aggggcacgc cgccgaagaa gtccatcagc atgtagtagt accatgcccg cagcgtgcgc
      601 agctcggcga gcgtgacgtc cttgttcgcc ccgcccgcct tctcgatcac gtcgatcatc
      661 aggttcgcct tcgccacgcc gctgaacagg gtgttccacg tcccgttcat gtcgtccagc
      721 gccgagccgc tgttcggagt ccacgtctgc ttgtggatct ccagccaccg gccgttgtcg
      781 taccagtcct ggccgcgcgt ggggaccacg agctcgtcgg tcgtgatctc gctgaggttg
      841 taccaccccc acatcgtgct gcgcaggctg gcatacaccg aggccacccc cgccagcacc
      901 tcctggtcgg tcttgaacgc gttctcgggc gtgagcgcgt ccttgggcac ctccgtgagg
      961 ttggtgcacg ccgggaacag cgtgagtgcg ggcaccagga gcagtgcgcc cagtgcgccc
     1021 agcccggctc ggcggatcga cgtcttcagg aagatcttca taagcttcgg ttacctggaa
     1081 gagtaggcgg agagtcgctt gagccgggtg cgtctagaac tggaggcgga cgccggtggt
     1141 gatcgtgcgg gcgcgcgggt acgtcaggta gtcgatcccc cgggtgccga tgccgtcctg
     1201 gttggcgtcg gtgaacactt ccggatcgta gcccgagtac ggggtgaaca ggagcaggtt
     1261 gtcgccggag aggtacaccc gagtggcccg gccgcccagc tggggcaggc tgaaggtata
     1321 gccgaccgtg acgttctgca ggcggatgaa gcggccgttc tcgatccagc gcgacgagta
     1381 gatggagggc tcgtcgatgc cggtggggtc gtcgagcgcc gaggcgagga agttgcgccc
     1441 ctgcttggca ttgcccttcg tggcgtacac cagcgccgtg ttattgaaca cgtcgcggcc
     1501 gaactcgccg cgccagttcc agctcgcgtc gaacatgttc cacgtgccgt tgctgtgcag
     1561 ccccaggctg aagctggggt tggcgttgcc gatgatcccc tcgtcggcgc cggtgggcga
     1621 gaaggtctcg ccgttcacgc agcccgcgct cgtggcgacg cacgagaaca cctgctttcc
     1681 ggcgccgtcc actcgcagga acttcggacc ccagaaggtg ccgagcggct ctccggggat
     1741 gaggcgctgg ccgaagcgtc ccgactgccc ctggccgaag actctgccgg tgatgatgaa
     1801 gttgcgtccc tcaccgaggt tgctgacctc gccgcgctcc accgacatca ccagcccgga
     1861 cgagagggtc cgggtcggct cttccagcag ccgcgcgtcg aaggtggcct cgaagccccg
     1921 gttccgcacc gcgccgatgt tctcgatgcg cgtggacacc acggcgggct gcggcacgct
     1981 caccgtgagc aggaggtcct tggtggtctt ctggtagaac tcgagcacgc cggtgaagcg
     2041 gtcgttccgg attccccagt ccacccccac gttggtctgc tcggaggtct cccacttgag
     2101 atcggggttc gcgacctggg cggcgacgag cccggtggtg acgcccgagc cgaacggata
     2161 ccgcgagccc tcgtctgccc ggagcaggag ctgcgtggcg tacggccgca ccgcctggtt
     2221 gccctgccgt ccccagccgg cgcgaagcgc cagggaggag aacatcccgc cccgcatgaa
     2281 gtcctcgttg ctcagccgcc acgacgcgga cacggcgggg aacaccgacc acttgttgcc
     2341 ctccgcgagc cgcgacgacc cgtcgcggcg caccacgccg gtgaggaagt acttctcggc
     2401 gtatccgtag ttcgcccgcc cgaagaacga caccagcttg ctctcctgga tgtacgacac
     2461 ggggggcggc gagctcgcct gcgtgccggc gccgaggttg ttccagagga acacgtcggt
     2521 gacgaacccc tgggcggtgg cctcgaagcc gtggttgttg aaggtgctgt actcgtaccc
     2581 gccgacgatg tcgaactcct gccgctcgcc gaccttcggc gtgaaggtga gcagctgctg
     2641 gaagttcagg ttctgcaggc tgcgctccgc ctgccgggcg gcgccgttga actgggcgcc
     2701 gatggggctg acgatgggga agtaggtctg gcgcaccgcg tccgagtagt ccacgccaag
     2761 cgtggtgcgg gcgacgaggc tcggcatgac ctcgaatgag ccgctgagat taccgagcac
     2821 gcgattctcg ggcgcctggt cgatcacctg ctcggcgatc gccaccgggt tgcgcgtccc
     2881 ctgcgcgccg ggtccgatct cgtagtactt gccggtgacc gggtcgacca ccggctgggt
     2941 gggattgaag atcgccatgt tggtgaacac gccgcccgag aagccgccgc cgttctccat
     3001 cgcgaggtaa tcgttgttca cccgcgatgc cgtcagcgtg agccccagcc cgagccgccc
     3061 gtcgaacgcc tcgtgctgcg cgttcagccg cccctggtac cgcttgagcc cattctcgat
     3121 cacgacgccc tgctggtcga agtagttcag cgaggcgcgg tacgtcgtcg ccggcgatcc
     3181 gcccgcgaac gacaggttgt ggctcttcgt ccagcctcgg cgggtgaggg cgtcttccca
     3241 gttcgtgttc gccgtgccga gggaggcgag ctgcgtggcc ggcagcttgc ccgccgtcac
     3301 ctgctgctgc acgaacgtcc ggtactggtc gccggtcatg aaatccaggc tgcgcgaggg
     3361 ggtcgccgcc gccacgtaga cgtcgtagtc cacggtcggg cggccgctgg cccgccggcg
     3421 cgtctggacc aggatgacgc cgttcgcccc gcggctcccg tagatcgccg tcgccgacgc
     3481 gtccttgagg accg
//
LOCUS       DASSYW010000288         3536 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1411941, whole genome shotgun sequence.
ACCESSION   DASSYW010000288 DASSYW010000000
VERSION     DASSYW010000288.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3536)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3536)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3536
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1411941"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1698)
                     /locus_tag="VFN38_04520"
     CDS             complement(<1..1698)
                     /locus_tag="VFN38_04520"
                     /inference="COORDINATES: protein motif:HMM:NF022481.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2723 domain-containing protein"
                     /protein_id="HET9011052.1"
                     /translation="MASTSSPSELDYRPSYLAGSIVSAVIFLLYMVTLAPSTAMWDTS
                     EYITAATVLGMPHPPGNPLFVLIGRVFAILPIASSIAVRINILAAVCSAVSAGMWFLI
                     TERVLVGWFQQRWMRVTGGALAAVIGATAFTVWNQSVVNEKVYTVSLLGIALVSWLMV
                     RWCDQPDGRKSDRILVLVAYLCGLGYANHMAGMLAAPAAGLAVLIVRPRTMLRWKLLL
                     ACVAALVLGITPFAMQPIRAAHFPALNEGEPTACRTELTASCTFSKGTYDAFMYNFNR
                     GQYGKPELGERQAPFTAQVGMWWLCFKWQWLRDAHYDRPFAQSLLGAVFLVLGLLGGY
                     VHWQRDRRSFWYFGSLMFTMSFVLIYYLNFKYGASQDPELAGVAREVRDRDYFYLWSF
                     SAWGVWAALGLLAAWDSVAALVSRERVVVGRDTVERPTHRGRLLTAPVLALAFIPLFT
                     NWTTASRAGQTDTADFARDLLNSVEPYGVLVTVGDNDTFPLWYAQEVEGVRRDVVVAN
                     TSLLNTDWYTRQLIRRPVYEYDAANGPAIYRNRSWPKPASSPIKMTMEQADSVPSYIQ
                     "
     gene            complement(1795..3327)
                     /gene="purH"
                     /locus_tag="VFN38_04525"
     CDS             complement(1795..3327)
                     /gene="purH"
                     /locus_tag="VFN38_04525"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0003937 - IMP cyclohydrolase activity
                     [Evidence IEA];
                     GO_function: GO:0004643 -
                     phosphoribosylaminoimidazolecarboxamide formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HET9011053.1"
                     /translation="MPRALLSVSDKSGLLDFARGLHALGWELLSTGGTARALRDAGIP
                     VREVSDVTRFPEMLDGRVKTLHPAVHGGLLARRDLPEHMAAIAEHGIAPIDLVVVNLY
                     PFRETAARAGVRPEDVIEQIDIGGPSMLRSAAKNFAAVTTVVDPADYAEVLASLGDTT
                     DALELRRRLAGKVFEHTAAYDAAIAGWFASQRADALPDRLTLSLEKAQTLRYGENPGQ
                     AAAFYVERPGAGLAGLVQRGGKELSFNNLLDLEGALLATEPFGTEVCCAIIKHTTPCG
                     LATGTNALDAYRKALACDPVSAFGSVISFTVPVDDAAAEAISSLFVECVVAPAFSAGA
                     LEILGRKKNLRVLEGAARWDPRAMDYKRVRGGMLVQQRPSAAIGDEGWTFVTARQPSS
                     EERRDLLFAWRAVASVKSNAIVLARDGATIGIGAGQMSRVDAAFMAVHKAVAAGHSTS
                     GAALGSDAFFPFRDGVDQAAEAGVRTIIQPGGSVRDAEVIAAADEHGIAMVFTGARLF
                     RH"
BASE COUNT          562 a         1248 c         1251 g          475 t
ORIGIN      
        1 ctggatgtac gacggcaccg agtcggcctg ctccatcgtc atcttgatcg gcgagctcgc
       61 cggcttgggc cagctgcgat tccggtagat cgcgggcccg ttcgccgcgt cgtactcgta
      121 cacgggacgg cggatgagct gccgcgtgta ccagtcggtg ttgagcagcg aggtgttcgc
      181 cacgacgacg tcgcggcgca ccccctccac ctcctgggcg taccagagcg ggaaggtgtc
      241 gttgtcgccc acggtcacca gcacgccgta cggctccacg gagttgagca ggtcgcgcgc
      301 gaagtcggcg gtgtcggtct ggccggcgcg cgacgccgtg gtccagttgg tgaacagggg
      361 gatgaacgcc agcgccagca ccggcgcggt gagcagccgt ccccggtgcg tggggcgctc
      421 gacggtgtca cggcccacca ccacgcgctc gcgcgagacg agcgccgcca cggaatccca
      481 cgccgccagg aggccgagtg cggcccacac cccccacgcc gagaagctcc acaggtagaa
      541 gtagtcgcgg tcgcgcacct cgcgcgccac gccggccagc tcggggtcct gcgacgcgcc
      601 gtacttgaag ttcaggtagt agatgagcac gaacgacatc gtgaacatca gcgacccgaa
      661 gtaccagaag ctccggcggt cgcgctgcca gtgcacgtag ccacccagca ggccgagcac
      721 caggaagacc gcgccgagga ggctctgggc gaagggccgg tcgtagtgcg cgtcgcgcag
      781 ccactgccac ttgaagcaca gccaccacat cccgacctgc gccgtgaagg gcgcctgccg
      841 ctcgcccagc tccggcttgc cgtactggcc gcggttgaag ttgtacatga acgcgtcgta
      901 cgtccccttg ctgaaggtgc acgacgcggt gagctcggtg cggcaggccg tcggctcgcc
      961 ctcgttgagc gcggggaagt gggcagcgcg gatgggctgc atggcgaacg gcgtgatgcc
     1021 cagcacgagc gcggccacgc aggcgagcag cagcttccac cgcagcatcg tgcgcggacg
     1081 cacgatgagc accgccaggc cggcggcggg cgcggcgagc atccccgcca tgtggttggc
     1141 gtagcccagc ccgcacaggt aggccacgag caccaggatg cggtccgact tccggccgtc
     1201 cggctggtcg caccaccgga ccatcagcca gctcacgagc gcgatgccga gcagcgagac
     1261 ggtgtagacc ttctcgttca cgacgctctg gttccacacc gtgaaggcgg tggcgccgat
     1321 gaccgcggcc agggcgccgc cggtgacgcg catccaccgc tgctggaacc agccgacgag
     1381 cacccgctcc gtgatgagga accacatccc cgccgacacg gcgctgcaca cggcggccag
     1441 gatgttgatg cgcaccgcga tggacgacgc gatcggcagg atcgcgaaca cccggccgat
     1501 cagcacgaac agcgggttgc ccggcgggtg cggcatgccg agcacggtgg ccgcggtgat
     1561 gtactcactg gtgtcccaca tcgccgtgga cggcgcgagg gtcaccatgt agagcaggaa
     1621 gatcacggcc gacacgatgc tgccggccag gtaggacggc cggtagtcga gctcggacgg
     1681 cgaggacgtc gacgccattg gttcgcgggg tgacggatag cagacgcccc gcggaagcgg
     1741 ggcggttgac agccggtgaa agatgctagg ggaggggggc ggacgccact gtggctagtg
     1801 ccggaagagc cttgcgccgg tgaacaccat ggcgatcccg tgctcgtcgg ccgcggcgat
     1861 cacctcggcg tcccgcaccg agccgccggg ctggatgatc gtccgcactc cggcctcggc
     1921 cgcctggtcg accccgtcgc ggaaggggaa gaaggcgtcg gacccgagcg cggcgccgct
     1981 cgtggagtgc cccgccgcga cggccttgtg caccgccatg aaggcggcgt ccacgcgcga
     2041 catctggccc gccccgatgc cgatcgtcgc cccgtcgcgc gccaggacga tggcgttgct
     2101 cttcacgctc gccacggccc gccaggcgaa cagcaggtcg cgccgctcct ccgagctggg
     2161 ctgccgcgcc gtgacgaagg tccacccctc gtcgccgatc gcggccgacg ggcgctgctg
     2221 caccagcatc cccccgcgca cccgcttgta gtccatcgcc cgcggatccc agcgcgccgc
     2281 gccttccagc acgcggaggt tcttcttgcg ccccaggatc tcgagcgcgc cggcgctgaa
     2341 ggcgggcgcc accacgcact ccacgaacag gctcgagatc gcctccgccg cggcgtcgtc
     2401 caccgggacg gtgaacgaga tcacggagcc gaacgccgac accgggtcgc acgccagcgc
     2461 cttgcgatag gcgtcgagtg cattcgtgcc cgtcgcgagc ccgcacggcg tggtgtgctt
     2521 gatgatcgcg cagcacacct cggtcccgaa tggctcggtg gcgagcagcg caccctcgag
     2581 atcgagcagg ttgttgaacg acagctcctt gccgccgcgc tgcacgagcc cggccagccc
     2641 cgcgccaggg cgctcgacgt agaaggccgc cgcctgtccg ggattctctc cgtaccgcag
     2701 cgtctgcgcc ttctccagcg acagcgtgag ccggtcgggc agggcgtcgg cacgctgcga
     2761 ggcgaaccag ccggcgatcg ccgcgtcgta ggccgccgtg tgctcgaaca ccttccccgc
     2821 gagtcggcgc cgcagctcca gcgcgtcggt cgtgtcgccc agcgaggcca ggacctccgc
     2881 gtagtcggcc ggatcgacga cggtcgtcac ggcggcgaag ttcttcgccg cggagcgcag
     2941 catgctcggc ccaccgatgt cgatctgctc gatgacgtct tccggtcgca caccggcccg
     3001 ggccgccgtc tcgcggaagg gatagaggtt caccaccacg aggtcgatcg gcgcgatgcc
     3061 gtgctcggcg atcgccgcca tgtgctccgg caggtcccgg cgcgcgagca ggccgccgtg
     3121 cacggcggga tgcagggtct tcacacgtcc gtcgagcatc tccgggaagc gcgtgacgtc
     3181 gctgacctcg cggacgggta tccccgcatc gcgcagggcg cgcgccgtgc ccccggtgga
     3241 aagcagctcc cagcccaggg cgtggagacc gcgagcgaaa tcgagcaggc cggacttgtc
     3301 ggaaacggac aacagcgcgc gaggcatctg gggcgttggg ggtgagacgt gggacgtgag
     3361 acatgggacg tgggacgtgg gacgtcccac gtccaacggg ctacctgggc gtgttcctct
     3421 gcatctcccc cgcgagcgaa ccgtcgtcca gatccggatc gagcgacggc agggagtcgg
     3481 gatcgagcac gaagggcggc tcgacgcggc cgtcggccgt caggcgcacc tcgccc
//
LOCUS       DASSYW010000289         2000 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_194040, whole genome shotgun sequence.
ACCESSION   DASSYW010000289 DASSYW010000000
VERSION     DASSYW010000289.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2000)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2000)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2000
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_194040"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..775
                     /locus_tag="VFN38_04530"
     CDS             <1..775
                     /locus_tag="VFN38_04530"
                     /EC_number="3.1.4.-"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HD-GYP domain-containing protein"
                     /protein_id="HET9011054.1"
                     /translation="TALLALTALKNYDNYTFTHMVNVSILTMGQARGLGIEGGLLREF
                     GLAALMHDIGKVKTPNEVLNKPGKLTDEEFDILKRHTVDGAEILKNTPEIPPLGPIVA
                     FEHHLRSDGTGYPTGTVRPQLNLATTLCGIADVYDAMRSQRVYQQAHPTDRILAVLQR
                     NDGKQFDQRLVKRFVQLVGIYPAGNLVRLDTGEIAVVLKAYAPDPYRPRVKVLTRPNG
                     QKLEHPYDVSLWDAREGQPQSISAPVDAAEHGIEPLSYL"
     gene            788..>2000
                     /locus_tag="VFN38_04535"
     CDS             788..>2000
                     /locus_tag="VFN38_04535"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HET9011055.1"
                     /translation="MRPFARWSGPVAPVALLLAAVAGWLATTAAQQPERGTKQIVSDI
                     SAPGIDRGLRDADFPRFAPRSSDRRWISGGGAEYLRDSLIVRFKPGTQAAAQRALLAQ
                     VDGTAGPALSYADFEIVTLGSGEDPAAVARRLSEQPDVEYAQARYRARPMFVPTDPLY
                     TLQWNYPQIDLERGWDINRGGSADVTVAILDTGVAFRGGTFRYNALAFQGPNGAQYPA
                     LGPLDIPFAVAPDLGASRFVSPRDFIWNDELPFDLAGHGTHVAGTIGQLSSNGISGTG
                     IAFNVKLMPVKVVDTEWDFIFNSPFIGTDDTVARGIRYAADNGAKVLNMSLGRDGEPA
                     PVVRAAIEYAVSHGAFVAVAGGNEGDASNAPERYAEFAPQIDGMVAVAATGRDRRRAT
                     YSTIASYLELAA"
BASE COUNT          333 a          718 c          663 g          286 t
ORIGIN      
        1 cacggcgctc ctggcgctga ccgcgctcaa gaactacgac aactacacgt tcacccacat
       61 ggtgaacgtc tccattctca cgatggggca ggcgcgcggg ctcggcatcg aaggcggcct
      121 gctgcgcgag ttcggcctgg ccgccctgat gcacgacatc ggcaaggtga aaacgccgaa
      181 cgaggtgctc aacaagcccg gcaagctcac ggacgaggag ttcgacatcc tgaaacgcca
      241 cacggtggac ggcgccgaga tcctgaagaa cacgccggaa attccgccgc tcggaccgat
      301 cgtggcgttc gagcaccatc tgcgcagcga cggcaccggc tacccgacgg gtacggtgcg
      361 cccgcagctc aacctggcca cgaccctctg cggcatcgcc gacgtgtacg acgccatgcg
      421 ctcgcagcgc gtgtatcagc aggcgcatcc caccgatcgc atcctcgcgg tgctgcagcg
      481 caacgacggc aagcagttcg atcagcggct ggtaaagcgt ttcgtccagc tcgtcggtat
      541 ctaccccgcc ggcaatctcg tgcggctcga cacgggcgag attgcggtcg tgctcaaggc
      601 gtacgcgccc gatccatatc gtccccgcgt caaggtgctc acgcgcccca acggtcagaa
      661 gctcgaacac ccgtacgacg tgagcttgtg ggacgcgcgc gaagggcagc cgcagtcgat
      721 ctcggcaccg gtggacgccg ccgaacacgg catcgagccg ctctcgtacc tgtaagctag
      781 gggacctatg cgtcctttcg ctcgctggag cggccctgtc gctccggttg cgctgctgct
      841 tgccgcggtc gcggggtggc tcgcgaccac agccgcccaa caacccgaac gcggcaccaa
      901 acagatcgtc tcggacatca gcgcaccggg gatcgatcgc gggctccgcg acgccgactt
      961 cccgcgtttc gcgccgcgct cgtccgatcg ccgctggatc agcggcggcg gcgccgagta
     1021 tctccgcgac agcctcatcg tgcggttcaa gcccggcacg caggcagcgg cgcagcgcgc
     1081 gctcctcgcc caggtggacg gcaccgcggg gccggcgctg tcgtacgcgg acttcgagat
     1141 cgtcacgctc ggcagcggcg aagaccccgc ggccgtggcg cggcggctga gcgagcagcc
     1201 cgacgtcgag tacgcgcagg cgcgctaccg ggcgcggccg atgttcgtgc ccaccgatcc
     1261 gctctacacg ctgcagtgga actacccgca gatcgacctg gaacgcggct gggacatcaa
     1321 ccgcggcggc tccgccgacg tcaccgtcgc catcctcgac accggtgtgg cgttccgcgg
     1381 cggcacgttc cgctacaacg ccctggcgtt tcagggcccg aacggcgcgc agtatcccgc
     1441 gctcgggccc ctggacatcc cgtttgccgt cgcgccggac ctcggcgcca gccggttcgt
     1501 ctcgccgcgc gacttcatct ggaacgacga gctccccttc gacctggcgg ggcacggcac
     1561 gcacgtggcg ggcaccatcg gccagctctc gagcaacggc atcagcggca ccggcatcgc
     1621 gttcaacgtg aagctgatgc cggtgaaggt ggtcgacacc gagtgggact tcatcttcaa
     1681 cagccccttc atcgggaccg acgacaccgt ggcgcgcggc atccgctacg cggcggacaa
     1741 cggcgccaag gtgctcaaca tgagcctcgg gcgcgacggc gaaccggcac cggtggtccg
     1801 ggccgcgatc gagtacgcgg tgtcgcacgg cgcgttcgtg gccgtggcgg gcggcaacga
     1861 gggcgacgcg tcgaatgcgc ccgagcgcta cgccgagttc gcgccgcaga tcgacggcat
     1921 ggtggcggtg gcggccaccg gacgggatcg gcggcgagcc acctactcga cgatcgcgag
     1981 ctatctcgaa ctcgcggcgc
//
LOCUS       DASSYW010000290         2675 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1201554, whole genome shotgun sequence.
ACCESSION   DASSYW010000290 DASSYW010000000
VERSION     DASSYW010000290.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2675)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2675)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2675
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1201554"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..469)
                     /locus_tag="VFN38_04540"
     CDS             complement(<1..469)
                     /locus_tag="VFN38_04540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011056.1"
                     /translation="MSSSRFPQLAPTLFITALVAASCANPKRIEEEPITVMRNGDRID
                     PPNRAIDAATTQALEAGVAGRERRDSIAAVAFASCAPAVCAALGRGEVALGMTEAQVL
                     AATRTTELAWTVRRSGGVAVLAPRDADAAPRDAVAPVALVQLAGGTVASLTYRE"
     gene            complement(492..1118)
                     /locus_tag="VFN38_04545"
     CDS             complement(492..1118)
                     /locus_tag="VFN38_04545"
                     /inference="COORDINATES: protein motif:HMM:NF024436.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein activator LpoB"
                     /protein_id="HET9011057.1"
                     /translation="MSLRRPRPLGALSLLAGAVLLTAAGGCVSKRVTRIEPTAVTDLS
                     GRWNDTDSRLVANQLVEQTLGAGWAKRYTDSHGGEAPTVVVGTFANRTMEHIAVGTFV
                     KDIERALVTTGAARVVASGAQRTEMRDERKDQQQNARADTRARQGQELGARFMLAGDL
                     QAIEDVDGRERVVFYQVDASLIDLETNAKVWVGQHKIKKYVERARFGL"
     gene            1314..1580
                     /locus_tag="VFN38_04550"
     CDS             1314..1580
                     /locus_tag="VFN38_04550"
                     /inference="COORDINATES: protein motif:HMM:NF025614.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPXCG motif-containing cysteine-rich protein"
                     /protein_id="HET9011058.1"
                     /translation="MTMVDFVNEDWTEADLDDEFPLGDGTAETESLVTCPHCGETNEI
                     ALDPGSGNDQEYIEDCHVCCRPILMYVRYARDGSAEVEVYASDS"
     gene            complement(1593..>2675)
                     /locus_tag="VFN38_04555"
     CDS             complement(1593..>2675)
                     /locus_tag="VFN38_04555"
                     /inference="COORDINATES: protein motif:HMM:TIGR00711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HET9011059.1"
                     /translation="WITDNYSWPWIFYINVPLGILAAMMVLSYVRDAEHQERASKIDV
                     LGIALLATTVGSLQWMLERGERYDWFESRFVTALCVTTVTSFVLLIWRELTIREPVIN
                     FRILLNRQLAAGVAFASMLGFALYGSVFVLPVFLQSLHGWTANQTGMVILPGALASAV
                     TMAVVGRNAARLDARLTVPAGASLFLYSMWRLSLLSFDAGAHDLFWPLIARGVGLGLI
                     FVPLTGATMADLKTSELAQGTGMFNLTRQLGGSLGIAISATLLTRFTAQSRALLAEHV
                     VTGDPVAMARVEGISRALVAKGMNAVSAKQQALMIIDRQLQGQACVLAFSRLYLLSGL
                     ALMAALPLLLLFRTGKSRGLGPGAAH"
BASE COUNT          401 a          958 c          947 g          369 t
ORIGIN      
        1 gctcgcggta cgtgaggctc gccaccgtgc cgccggccag ctgcacgagc gccaccggcg
       61 ccaccgcgtc gcgcggcgcc gcgtcggcgt cgcggggcgc cagcaccgcc accccgccgc
      121 tgcggcggac ggtccaggcc agctcggtgg tgcgggtggc ggcgagcacc tgcgcctcgg
      181 tcatgccgag cgccacctcg ccgcgcccga gcgccgcgca gacggccggc gcgcagctcg
      241 cgaaggcgac ggcggcgatg gagtcgcgcc gctcgcgccc cgcgacgccc gcttccagcg
      301 cctgggtggt ggcggcgtcg atggcacggt tgggcggatc gatgcggtcg ccgttccgca
      361 tcaccgtgat cggctcttcc tcgatgcgct tcgggttggc gcacgacgcg gccacgaggg
      421 cggtgatgaa cagcgtcggc gcgagctgcg gaaatcggga gctggacatg gtcgggtctc
      481 ggcgtgagtg gtcagagtcc gaagcgggcg cgctcgacgt acttcttgat cttgtgctgc
      541 cccacccaga ccttggcgtt cgtctcgagg tcgatgagcg aggcgtccac ctggtagaac
      601 acgacgcgct cgcgcccgtc cacgtcctcg atcgcctgga ggtcgccggc cagcatgaag
      661 cgcgcgccga gctcctgccc ctgccgcgcg cgcgtgtcgg cccgcgcgtt ctgctgctgg
      721 tccttccgct cgtcccgcat ctcggtgcgc tgcgcgcccg aggcgacgac ccgcgccgcg
      781 ccggtggtga cgagcgcgcg ctcgatgtcc ttcacgaagg tccccaccgc gatgtgctcc
      841 atggtgcggt tggcgaaggt gccgacgacg accgtcggcg cctccccgcc atggctgtcg
      901 gtgtaccgct tggcccaccc cgcgccgagc gtctgctcga cgagctggtt ggcgacgaga
      961 cgggaatcgg tgtcgttcca ccggccggac aggtcggtga cggcggtggg ctcgatgcgc
     1021 gtgacgcgct tggagacgca gccgccggcg gcggtgagca gcacggcgcc ggcgagcagg
     1081 gagagtgcgc cgagggggcg cgggcgacgg agtgacatgg cgtgggctcc tggggggtgc
     1141 ggtggtcggc atcccggaga ggcaccgccc aggccagtgg tgactcaggt cacaaaggca
     1201 gaaatgacaa ctacttagcc tgcctcgtcc tcctcatggt gtccacgcgc gtggacgcgg
     1261 gtgtttcagt tccgggggac agccgccgat cgcgacccac cctgcgctac cttatgacca
     1321 tggtggattt cgtgaacgaa gactggacgg aggcggacct cgacgacgag ttccccctcg
     1381 gcgacggcac cgccgagacc gagtcgctcg tcacctgccc gcattgcggc gagaccaacg
     1441 agatcgcgct ggacccgggc agcggaaacg accaggagta catcgaggac tgccacgtct
     1501 gctgccggcc gatcctcatg tacgtgcgct acgcgcgcga cgggtcggcc gaggtggagg
     1561 tctacgcgtc ggactcctga gccgggcggc gctcagtgcg ccgcgcccgg ccccagcccg
     1621 cgcgacttcc ccgtccggaa gagcagcagc agcggcagcg ccgccatgag cgccagcccg
     1681 gacagcaggt acagcctgga gaacgccagc acgcacgcct gcccctggag ctgccggtcg
     1741 atgatcatca gcgcctgctg cttcgccgac accgcgttca tccccttggc gaccagggcg
     1801 cgcgagatcc cctccacccg cgccatcgcc accgggtcgc ccgtcacgac gtgctcggcc
     1861 agcagcgccc gggactgcgc cgtgaagcgc gtgagcagcg tggcgctgat cgcgatgccc
     1921 agcgagccgc cgagctgccg ggtgaggttg aacatccccg tgccctgcgc gagctcgctc
     1981 gtcttcaggt cggccatcgt cgccccggtg agggggacga agatcagccc cagccccacc
     2041 ccccgcgcga tgagcggcca gaagaggtcg tgcgcccccg cgtcgaacga gaggagcgac
     2101 agccgccaca tgctgtagag gaagagcgag gcgccggccg gcacggtgag gcgcgcgtcg
     2161 agccgcgcgg cgttccgccc cacgacggcc atcgtgaccg ccgacgcgag cgcccccggc
     2221 aggatcacca tgccggtctg gttcgccgtc cagccgtgga ggctctggag gaacacgggc
     2281 agcacgaaca cgctgccgta gagcgcgaag ccgagcatgg aggcgaacgc cacccccgcc
     2341 gcgagctggc ggttgagcag gatgcggaag ttgatcaccg gctcccggat cgtcagctcg
     2401 cgccagatca gcagcacgaa cgacgtcacc gtcgtcacgc acagcgccgt cacgaaccgc
     2461 gattcgaacc agtcgtaccg ctcgccgcgc tccagcatcc actggagcga cccgacggtc
     2521 gtcgccagca gcgcgatgcc gagcacgtcg atcttgctcg cgcgctcctg atgctccgcg
     2581 tcgcgcacgt acgagagcac catcatcgcc gccaggatgc cgagcgggac gttgatgtag
     2641 aagatccacg gccagctgta gttgtccgtg atcca
//
LOCUS       DASSYW010000291         2079 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1256761, whole genome shotgun sequence.
ACCESSION   DASSYW010000291 DASSYW010000000
VERSION     DASSYW010000291.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2079)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2079)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2079
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1256761"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..456
                     /locus_tag="VFN38_04560"
     CDS             <1..456
                     /locus_tag="VFN38_04560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011060.1"
                     /translation="EHPRLALLVDPSSCRKLEIVDLEAGARTDVPLPGCATGLRAWGE
                     ETPFLITGVESVGEFAIDVRTGKAARLGAGSTGGDLVGSAFYAVDPEHRDVLMAVDPS
                     SGRRWTATTDAERIRSAVGVPAARKVVIVDERQRILTLDVDSRQVRVCQ"
     gene            complement(502..1488)
                     /locus_tag="VFN38_04565"
     CDS             complement(502..1488)
                     /locus_tag="VFN38_04565"
                     /inference="COORDINATES: protein motif:HMM:NF017545.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011061.1"
                     /translation="MKVFLRAALVLALVGCGGSRATPGGAGGAGGGATSDGAAGADAR
                     DTQASDGAGDDRMDATGAADTSADGPADAADGAGVQCTPGTKQCAGSTAEICVATGNA
                     WNRLACPNGCAAGVCNPMSLETGWKVYQYNLTDDSIQTPASYTFEMNGLVAVQSANPM
                     ASVYYNDTVLPEGIVVTGRFGVHTTSDDDLVGFVFGWQDPEHTYLFDWKQATQPDGTC
                     GTANAGASLKLISSATALDKCADLWESAGTTKVTPLVAATVNPIGWMDNVDYDLTLSV
                     RPGAITIDVMQGTTKVVSITSNDTTYRSGKFGFFNYSQEAVRYEFFSISPIQ"
BASE COUNT          296 a          710 c          734 g          339 t
ORIGIN      
        1 gagcatcccc ggctcgcgct gctcgtcgat ccgtcatcgt gccggaagct cgagatcgtc
       61 gatctggagg cgggcgcgcg caccgatgtc ccgctgcccg gctgtgccac cggcctgcgc
      121 gcctggggcg aagagacgcc gttcctgatc acgggcgtcg agtccgtggg cgaattcgcc
      181 atcgacgtgc gcacgggaaa ggcggcgcgc ctcggggcgg gctcgaccgg gggggacctc
      241 gtcgggtccg ccttctacgc cgtcgacccc gaacaccgag acgtattgat ggccgtcgat
      301 ccctcgtccg gcaggcgctg gacagcgacg acggacgccg aacggattcg atccgctgtc
      361 ggtgttcccg ccgcccgcaa ggtcgtgatc gtcgacgagc ggcagcgcat tctcaccctc
      421 gacgtcgact cccgtcaggt gcgggtgtgc caatgacatc gatcgtgctg ctccggatta
      481 tcaatcgctc tggtagggtc gttactggat cggcgagatc gagaagaact cgtaccggac
      541 ggcctcctgc gagtagttga agaagccgaa cttgccggag cggtacgtgg tgtcgttcga
      601 ggtgatagag acgaccttgg tcgtgccctg catgacgtcg atcgtgatcg cgcccggacg
      661 gacgctgagc gtcagatcgt agtcgacgtt gtccatccag ccgatcggat tgacggtggc
      721 ggccaccagc ggcgtgacct tggttgtgcc ggcgctctcc cacaggtccg cgcacttgtc
      781 gagcgccgtg gccgacgaga tcagcttcaa cgacgcgccg gcgttggccg tgccgcaggt
      841 gccgtccggc tgggtcgcct gcttccagtc gaacaggtag gtgtgctccg gatcctgcca
      901 gccgaagacg aacccgacga ggtcgtcgtc cgaggtcgtg tgcacgccga accgcccggt
      961 caccacgatc ccctcgggca gcaccgtgtc gttgtagtag acggacgcca tcggattggc
     1021 cgattgcacc gccaccaggc cgttcatctc gaacgtgtag ctggcgggcg tctggatgct
     1081 gtcgtcggtg aggttgtact ggtacacctt ccagcccgtc tccagcgaca tcggattgca
     1141 cacgcccgcc gcgcacccgt tcgggcaagc gagacgattc caggcattgc cggtcgcgac
     1201 acagatctcg gcggtggatc cggcgcactg cttcgtgccc ggcgtgcact gcacgcccgc
     1261 gccatcggcg gcgtccgcgg ggccgtcggc ggaagtatcc gcggcgccgg tcgcgtccat
     1321 tcgatcatcg ccggcgccgt ccgaggcctg cgtgtcacgt gcgtccgctc cagcggcgcc
     1381 atcgctcgtc gcgccgccgc cggcgccgcc cgcgccgccg ggggtcgcgc ggctgccgcc
     1441 acaaccaacc agggccagga ccagcgcggc ccggaggaag accttcatcg tcatggaagc
     1501 ggttatcaac cgcgctcggc tggccgtcaa cgatcgcccc gaggccggtc accagccggt
     1561 gaagtcgaag ctgtcgcgat tggcggatac ctctcaagtt tctgaggatc gtgaacgcgc
     1621 gcggcccgat cccggcgtcg ggcgtgcccg agttcgtggt ctagggcttg ctgcgcccgt
     1681 cggccatgcg aacacggctc atccttccgg ctttgacagg gctcgcgctt gcggtcggcg
     1741 cagcttgcgg ctcgaaagcg ctgcaaggcg acggcggtca ggcgggcacc ggaacgggcg
     1801 ccgcggggac ggcgggaact ggaagcggcg gtggtggcca ggcgggcacc ggcgccgcgg
     1861 gaacgaccgg cgccgcgggg gccatcggag cgggtggccg cggcggcgcg ggcggcggcg
     1921 cggccggcac cagcggtcac gacgagtgtc agtccgacgg cgactgcccg acgagcggtt
     1981 gctcgtcacc gccctgttcc gagctgttgt gcgcgctcgg caacgacggc ttccaccatt
     2041 gcacgccgcg cacgccgccc gcgctcgtcg tctgtcctg
//
LOCUS       DASSYW010000292         3361 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_198055, whole genome shotgun sequence.
ACCESSION   DASSYW010000292 DASSYW010000000
VERSION     DASSYW010000292.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3361)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3361)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3361
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_198055"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..488)
                     /locus_tag="VFN38_04570"
     CDS             complement(<1..488)
                     /locus_tag="VFN38_04570"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HET9011062.1"
                     /translation="MKYRTFPGAGVSVSEVGFGTWTVSTGWWGEMSDADAVTMLRRAH
                     DERGITFFDAADTYGNGRSERQLAEAFRGRRQEVVYASKVGYDIYNESAVAARRGQNE
                     LPMRTDPAYIRFAVDRCLERLETDYLDVLQIHNAKMEHVRQADLWGTLRDLQKEGKIR
                     AWG"
     gene            complement(613..1605)
                     /gene="hemB"
                     /locus_tag="VFN38_04575"
     CDS             complement(613..1605)
                     /gene="hemB"
                     /locus_tag="VFN38_04575"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004655 - porphobilinogen synthase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HET9011063.1"
                     /translation="MSTFPSYRARRLRRTPALRRLVRETRLDPASFVLPLFVRSGSGV
                     RTPVGSMPGCAQTSVDEMLRDAEAAASAGVGGVILFGVPDTKDATGSSAWDPKGPVQE
                     GVRALKLQLPELVVMTDVCMCEYTSHGHCGVLDADGHVLNDATLELLGREALSHAEAG
                     ADVVAPSDMMDGRVRAIRESLDGAGFTETPILSYAAKYAGAFYGPFREAAESTPQRGD
                     RKGYQMDLANADEALREVWLDIEEGADMVMVKPAGPSLDIIQRVKRETGYPLGAYQVS
                     GEFAMIQAAAERGWIDGERAMMESLLAIRRAGADFILTYFATDAARLLRAGWDG"
     gene            complement(1676..2359)
                     /locus_tag="VFN38_04580"
     CDS             complement(1676..2359)
                     /locus_tag="VFN38_04580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011064.1"
                     /translation="MTSDSRARVAPRRGATRVAIRQISLAVGVGLGAAMAGACSLADP
                     SLPPAQYVAPAVGTVYRYAGFSNTVVGADGLRTRFVDDSGRQGLRVGLFISDDPRHPS
                     RIDPAQLGALWPLESEKQTNVVVRNGSSAWLWRFKVLGVQDVTVPAGRFQTYLVQAVQ
                     RPDSIRDPKAPRETVVGYTFWYAPSIGAVVRFRTTYYSGPAMGQVVESELRAVERPPA
                     APGGRPTGS"
     gene            complement(2365..3189)
                     /locus_tag="VFN38_04585"
     CDS             complement(2365..3189)
                     /locus_tag="VFN38_04585"
                     /inference="COORDINATES: protein motif:HMM:NF038132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NF038132 family protein"
                     /protein_id="HET9011065.1"
                     /translation="MRRLQGVAVAGALALIATRAPAQAFNGGIPAGWTCIGSCGTSGA
                     NGVVTLAPGGGTQYGWVSTNNGTFTGGLGPGIGATADQPGPATNGTVLRSPTFAANSG
                     DLLHFFFNYVTTDGAGFADYAWARVLDPEFNEVALLFTARTVASGSIVPGQGMPVPAA
                     TLNPASVTIIAGGPEWAPLGDDSGACFDVGCGYTGWVSSDFTMLSGGTFILEFGVTNW
                     NDEAFQSGLAIDGIQIAGIDIGQPPVTTVPEPATMTLFATGLLGLGGAIRRRRQSA"
BASE COUNT          485 a         1260 c         1138 g          478 t
ORIGIN      
        1 ccccacgccc ggatcttccc ttccttctgg aggtcccgca gcgtgcccca gaggtcggcc
       61 tgccgcacgt gctccatctt cgcgttgtgg atctggagca cgtcgaggta gtcggtctcg
      121 aggcgctcga ggcaccggtc caccgcgaag cggatgtagg ccggatcggt ccgcatcggc
      181 agctcgttct gaccgcgccg cgccgccacc gcgctctcgt tgtagatgtc gtagccgacc
      241 ttcgaggcgt agacgacctc ctgccggcgg ccgcggaacg cctccgccag ctggcgctcg
      301 ctgcggccgt tgccgtaggt gtcggcggcg tcgaagaagg tgatcccgcg ctcgtcgtgc
      361 gcccggcgca gcatcgtcac cgcgtcggcg tcgctcatct cgccccacca gccggtggag
      421 acggtccagg tgccgaagcc gacctcgctc acggagacgc cggcgccggg gaaggttctg
      481 tatttcatgg gttgataccg gagggaagct tgctgcaaaa aaaaccgtag acggtagacg
      541 gtgttcggac gccggtgacg gccgtcgcga ctaccgtccg ccgtctaccg tcttccgttc
      601 accgccgttc tctcacccgt cccaccccgc gcgcagaagt cgcgcggcat cagtcgcgaa
      661 gtaggtgaga atgaaatcgg cgccggcgcg ccggatcgcg agcagcgact ccatcatcgc
      721 ccgctcgccg tcgatccagc cgcgctcggc ggccgcctgt atcatagcga actcgccact
      781 cacctggtat gcgcccagcg gatagcccgt ctcgcgcttc acgcgctgga tgatgtcgag
      841 cgagggaccg gctggcttca ccatcaccat gtccgctccc tcctcgatgt cgagccatac
      901 ctcgcgcagc gcctcgtcgg cgttcgcgag gtccatctgg tagcccttgc ggtcgccacg
      961 ctgcggcgtg ctctcggcgg cctcgcggaa cgggccgtag aaggcgccgg cgtacttcgc
     1021 cgcgtagctc aggatcggcg tctcggtgaa ccccgcgccg tcgagcgact cgcggatcgc
     1081 ccgcacccgg ccgtccatca tgtcgctcgg cgccaccacg tcggcgccgg cctcggcgtg
     1141 cgacagcgcc tcccgcccca gcagctcgag cgtcgcgtcg ttcagcacgt ggccgtcggc
     1201 gtcgagcacc ccgcagtggc cgtgggaggt gtactcgcac atgcagacgt cggtcatcac
     1261 gacgagctcc ggcagctgga gcttgagggc gcgcaccccc tcctgcaccg gccccttcgg
     1321 atcccacgcc gacgacccgg tcgcgtcctt cgtgtcgggg acgccgaaga ggatcacccc
     1381 gccgaccccc gccgatgccg ccgcctcggc gtcgcgcagc atctcgtcca ccgacgtctg
     1441 ggcgcagccc ggcatcgagc cgaccggggt gcgcacgccg ctgcccgacc gcacgaagag
     1501 aggaaggacg aagctcgccg gatcgagacg cgtctcgcgg acgaggcggc ggagggcggg
     1561 ggtgcgtcgc aggcgccgcg cacggtagct cgggaaggtc gacatgcgga gaaagatagc
     1621 ctccgcgccc cgctcgttca ccgcagcggc gccccgcccg gcggcgcccg cgccctcagc
     1681 ttcccgtcgg ccgacctccc ggcgccgcgg gcgggcgctc caccgcgcgc agctccgact
     1741 cgaccacctg ccccatcgcg ggccccgagt agtacgtggt cctgaagcga accacggccc
     1801 cgatcgacgg cgcgtaccag aacgtgtagc cgacgactgt ctcccgcggc gccttcggat
     1861 cgcggatcga gtccgggcgc tgcaccgcct gcacgaggta ggtctggaag cgccccgccg
     1921 gcacggtgac gtcctgcacg ccgaggacct tgaagcgcca gagccacgcg ctcgagccgt
     1981 tccgcacgac gacgttcgtc tgcttctcgc tctccagcgg ccacagcgcc ccgagctgcg
     2041 ccggatcgat ccgcgacggg tgccgcgggt cgtcggagat gaacagcccc acccgcagtc
     2101 cctgccgccc gctgtcgtcc acgaagcgcg tacgaaggcc gtccgcgccg accacggtgt
     2161 tgctgaagcc ggcgtagcga tacacggtgc cgaccgccgg agcgacgtac tgtgccggcg
     2221 ggagcgacgg gtcggcgagc gagcaggcgc cggccatcgc cgcgccgagt ccgacgccga
     2281 cggcgagcga gatctgccgg atcgcgacac gggtcgcccc tcggcgagga gcgacccgtg
     2341 cgcgtgagtc ggaggtcatc cggcctacgc gctctggcgc cggcggcgga tggctccgcc
     2401 gagaccgaga agaccggtgg cgaacagcgt catcgtcgcc ggctccggca ccgtcgtcac
     2461 cggcggctgg ccgatgtcga tgcccgcgat ctggatcccg tcgatcgcca gcccagactg
     2521 gaacgcctcg tcgttccagt tcgtgacgcc gaactcgagg atgaaggtgc cccccgagag
     2581 catcgtgaag tcggagctga cccaccccgt gtatccacac ccgacgtcga aacaggcgcc
     2641 cgagtcgtcg ccgagcgggg cccattccgg cccgcccgcg atgatcgtga cggaggccgg
     2701 gttgagggtc gccgccggca ccggcatccc ctggccggga acgatgctgc cgctcgccac
     2761 cgtccgcgcc gtgaacagca gcgcgacctc gttgaactcc gggtcgagca cgcgcgccca
     2821 ggcgtagtcg gcgaagccgg ccccgtcggt cgtcacgtag ttgaagaaga agtgcagcag
     2881 atcgcccgag ttggcggcga aggtgggcga cctgagcacg gtcccgttcg tcgccggacc
     2941 cggctggtcg gccgtcgcgc cgatcccggg gccgaggccg cccgtgaagg tgccgttgtt
     3001 cgtgctcacc cacccgtact gcgtgccccc gcccggcgcg agggtgacca cgccgttggc
     3061 gccgctcgtg ccgcaactac cgatgcacgt ccagccggcg ggaataccgc cgttgaacgc
     3121 ctgcgccgga gcgcgcgtcg cgatcagcgc cagtgccccg gctacggcca ccccttgcaa
     3181 tcgtcgcatt cctcctccct gcgtgcgaag tgggcctgct cggcacttgg cgacgaaggc
     3241 gaccggcact cggcccccgg ccggggatgc cgcatccccg acgccgccgg cccgtgaacg
     3301 ccacggcgcc gcgcgactcg cacgagatgg cagatgctac ggtggaggag agcgcctcga
     3361 g
//
LOCUS       DASSYW010000293         2102 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1569711, whole genome shotgun sequence.
ACCESSION   DASSYW010000293 DASSYW010000000
VERSION     DASSYW010000293.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2102)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2102)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2102
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1569711"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1291
                     /locus_tag="VFN38_04590"
     CDS             <1..1291
                     /locus_tag="VFN38_04590"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003883 - CTP synthase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006241 - CTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HET9011066.1"
                     /translation="TDEIKAAIRRMAPENDVVVVEIGGTVGDIESQPFLEAIRQFRHD
                     VGRENAIFVHLTLIPFIAAAGELKTKPTQHSVRELMEIGIQPDFLIVRTERPVPDDVK
                     RKIALFCNVDYGAVIESPDVKSIYQIPLSFREQGFDEKVIQRFGIERPATDLAPWREM
                     VQRIVAPHERVRIAVVGKYTDFVDSYKSVQEALIHGGIANDVGVDISWTSSDSFTDAA
                     AARSILAQHDGLLVPGGFGVRGVEGMVEAIRAARTEGVPFFGICLGMQTAIIEFARNV
                     CGLDDSHSSEFAPECSDPVISLMESQQHVTDMGGTMRLGAYPCRLARGSRAAEVYGVA
                     EVSERHRHRYEVSNAYRDLFVQHGLRLSGLSPDGQLVEVVELPSHPWFIGCQFHPELQ
                     SRPTRPHPLFAGFVAAAAAAKRRHAGKGAAPLAAARG"
     gene            1291..>2102
                     /gene="kdsA"
                     /locus_tag="VFN38_04595"
     CDS             1291..>2102
                     /gene="kdsA"
                     /locus_tag="VFN38_04595"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008676 - 3-deoxy-8-phosphooctulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HET9011067.1"
                     /translation="MTRLFRRDALFLIAGPCQLEDDALNLQVAEHLARLAPRVPGGII
                     FKASFDKANRSNPGATRGLGLEKGLAALDRVRRASGLPVLTDVHLPEQCAPAAEVVDV
                     LQIPAFLSRQTDLLMAAGATGKPVNVKKGQWMHPEGMRGAVQKVRAGFTESGRTGAIE
                     VAATERGTFFGYGDLVVDFRSFPRMRAACDAPVIFDATHSVQQPGRGEGGTSGGAREF
                     IPPLTLAACAVGVDGLFMETHPDPAHAPSDGPNMMPLTQLDDLILRAVEIWER"
BASE COUNT          306 a          772 c          710 g          314 t
ORIGIN      
        1 caccgacgag atcaaggccg cgatccgccg catggccccc gagaacgatg tcgtcgtcgt
       61 ggagatcggc ggcaccgtcg gcgacatcga gtcgcagccc ttcctcgagg ccatccgcca
      121 gttccgccac gacgtcggcc gcgagaacgc gatcttcgtg cacctcacgc tgatcccgtt
      181 catcgccgcc gcgggcgagc tcaagacgaa gcccacccag cactccgtgc gcgagctgat
      241 ggagatcggg atccagcccg acttcctcat cgtccgcacc gagcggcccg tgccggacga
      301 cgtgaagcgc aagatcgccc tcttctgcaa cgtcgactac ggcgcggtga tcgagtcccc
      361 cgacgtgaag tcgatctacc agatccccct ctccttccgt gagcagggct tcgacgagaa
      421 ggtgatccag cgcttcggca tcgagcgccc cgccaccgac ctcgcgccct ggcgcgagat
      481 ggtccagcgc atcgtcgcgc cgcacgagcg cgttcgcatc gccgtcgtgg gcaagtacac
      541 ggacttcgtg gacagctaca agagcgtgca ggaggcgctc atccacggcg gcatcgccaa
      601 cgacgtcggc gtggacatca gctggacgtc gagcgacagc ttcaccgacg ccgccgcggc
      661 gcggagcatc ctcgcgcagc acgacggcct cctcgtgccc ggcggcttcg gcgtccgcgg
      721 cgtggaaggg atggtggaag ccattcgcgc cgcccgcacc gagggcgttc cgttcttcgg
      781 catctgcctc ggcatgcaga cggccatcat cgagttcgcg cgcaacgtct gcgggctgga
      841 cgacagccat tcgtcggagt tcgcgcccga gtgcagcgat cccgtcatct cgctgatgga
      901 atcgcagcag cacgtcaccg acatgggcgg caccatgcgg ctcggcgcct atccgtgccg
      961 gctcgcccgc ggctcgcgcg cggcggaggt gtacggcgtg gccgaggtga gcgaacggca
     1021 ccggcaccgc tacgaggtgt cgaacgccta ccgcgatctg ttcgtgcagc atggcctgcg
     1081 gttgagcggc ctctcgcccg atggccagct cgtcgaggtg gtcgagctgc cgtcgcaccc
     1141 ctggttcatc ggctgccagt tccatccgga gctccagtcg cgtcccacgc gtccgcatcc
     1201 gctgttcgcc ggcttcgtcg cggcggcggc cgccgccaag cggcggcacg cgggcaaggg
     1261 cgctgcgccg ctcgcggcgg cgcgcggctg atgacccgtc tcttccgccg ggacgcgctc
     1321 ttcctcatcg ccggcccctg ccagctcgag gacgacgcgc tcaacctcca ggtggcggag
     1381 catctcgccc gcctggcgcc gcgcgtgccc ggcggcatca tcttcaaggc cagcttcgac
     1441 aaggccaacc gctcgaaccc cggcgccact cgcgggctgg gtctcgagaa ggggctcgca
     1501 gccctcgatc gcgtgcgtcg cgcctcgggg ctgcccgtgc tcaccgacgt gcaccttccc
     1561 gagcagtgcg caccggccgc cgaggtcgtg gacgtgctgc agatcccggc cttcctctcg
     1621 cgccagaccg accttctcat ggcggcgggg gcgacgggca agccggtgaa cgtgaagaag
     1681 gggcagtgga tgcaccccga ggggatgcgc ggcgccgtgc agaaggtgcg cgccggcttc
     1741 accgagtcgg gtcgcaccgg cgcgatcgag gtcgcggcga ccgagcgcgg caccttcttc
     1801 ggctacggcg atctcgtcgt cgacttccgc tcctttccgc gcatgcgcgc cgcgtgcgac
     1861 gcgcccgtca tcttcgacgc gacgcacagc gtgcagcagc ccggccgcgg cgaggggggc
     1921 acgagcggcg gcgcgcgcga gttcatcccg ccgctcacgc tcgccgcctg cgccgtgggc
     1981 gtggacggac tgttcatgga gacgcatccc gatccggcac acgcgccgag tgacgggccg
     2041 aacatgatgc cgctgacgca gctggacgat ctgatcctgc gcgccgtcga gatctgggag
     2101 cg
//
LOCUS       DASSYW010000294         2085 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_632183, whole genome shotgun sequence.
ACCESSION   DASSYW010000294 DASSYW010000000
VERSION     DASSYW010000294.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2085)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2085)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2085
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_632183"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(135..1226)
                     /gene="nagZ"
                     /locus_tag="VFN38_04600"
     CDS             complement(135..1226)
                     /gene="nagZ"
                     /locus_tag="VFN38_04600"
                     /EC_number="3.2.1.52"
                     /inference="COORDINATES: protein motif:HMM:NF013126.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-N-acetylhexosaminidase"
                     /protein_id="HET9011068.1"
                     /translation="MRREIGQLLIGSLPGQIITAEMKSLAREFELGGVILFARNIEAP
                     EQVAELAHDTQQLVPSVPLWVSVDQEGGRVARLKAPFTEWPPMATLGRRGDEGLARRF
                     AAALAAELRAVGITLDYAPVLDIHTNPKNPVIGDRAFSEDAAMVARIGGAVIDELQRA
                     GVAACGKHFPGHGDTSVDSLLELPLVEHPPDRIRRVECVPFAAAIKAGVAFIMTAHVL
                     VPSLDEQRPATLSPRVVQKMLREELGFEGVILSDDLEMKAIAATYSVPDAAVQAIAAG
                     CDGLLICSGDVEVQAVTLEALVHAVEEGRISFKRLEDAHKRLRAAKERMLAQSTLAGS
                     SAGPSPAVLRQVLGCDAHRRVADDMARDA"
     gene            1259..>2085
                     /locus_tag="VFN38_04605"
     CDS             1259..>2085
                     /locus_tag="VFN38_04605"
                     /inference="COORDINATES: protein motif:HMM:NF012509.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011069.1"
                     /translation="MRIETSAPTRIDLAGGTIDIWPLYLFHPGAQTLNAAISVRARAR
                     LESRTDSRIVLRSEDTGVTVEADDPAALRHEPRLRLLSLLASFFSVRGVTLTTTSESP
                     TGAGLAGSSALNVAVCAALAEWKREHYEPEALLQLAMNVEAQTINVPTGLQDYRPALY
                     GGLAALELEVDGIHRVPLDVDLRELNRRIVLCYTGEPHFSGTNNWEITKKHIDGDQHV
                     FDCFERIRDTAAAMRTALVKGDWEATGRAIADEWENRKRLAPGVTTPLIDELIARARA
                     "
BASE COUNT          313 a          766 c          705 g          301 t
ORIGIN      
        1 gttggaatgg accggctcga atcccagacg ccgcagctcc gcctcgccgc gttcgagctc
       61 ctcgggtgcg cacccgctgg ccggcgcgac gacggcgatt cgatcgcccg ggtggagcgg
      121 cgacggtctg atcatcaggc gtcgcgcgcc atgtcgtcgg ccacgcggcg gtgcgcgtcg
      181 cacccgagca cctggcgaag gacggctggc gacgggccgg cggacgagcc cgccagcgtt
      241 gattgggcga gcatccgctc cttggcggcg cgcaggcgct tgtgcgcatc ctcgaggcgc
      301 ttgaaggaga tgcgaccctc ttccacggcg tggaccagcg cttcgagcgt gaccgcctgc
      361 acctccacgt cgccgctgca gatgagcaga ccgtcgcagc cggccgcaat cgcctgcacc
      421 gcggcgtcgg gcacgctgta ggtggcggca atcgccttca tctcgaggtc gtcgctcagg
      481 atgacgccct cgaacccgag ctcttcgcgc agcatcttct ggacgacgcg cggcgacaag
      541 gtggccggcc gctgctcgtc gagcgacggc acgagcacgt gcgcggtcat gatgaacgcc
      601 acccccgctt tgatggcggc ggcaaacggc acgcactcca cacgccggat ccggtccggc
      661 ggatgctcca cgagcggcag ctcgaggagc gagtccaccg aggtatcgcc gtgccccggg
      721 aagtgcttgc cgcaggccgc cacgccggcg cgctgcagtt cgtcgatgac ggctcccccg
      781 atgcgcgcca ccatcgcggc atcttccgaa aacgcgcgat cgccgatgac cgggttcttc
      841 gggttggtgt ggatgtcgag caccggcgcg tagtcgagcg tgatgccgac cgcccggagt
      901 tcggcggcga gcgccgcggc aaaccggcgc gccagcccct cgtcgccccg gcggcccagg
      961 gtggccatcg gcggccactc ggtgaacggc gccttcaggc gcgccacgcg gccgccttcc
     1021 tggtccacgc ttacccacag gggcaccgac ggcaccagct gctgcgtgtc gtgcgccagc
     1081 tccgccacct gctccggcgc ctcgatattc cgcgcgaaga ggatgacgcc gccgagctcg
     1141 aactcgcgcg cgagcgactt catttccgcg gtgatgatct gccccggcag gctgccgatg
     1201 agcagctgcc caatctcgcg tcgcaaggac cccggcacgc cgtcattata attgcgcggt
     1261 gcgcatcgag acctccgcgc cgacccggat cgatctggcg ggcggcacga tcgacatctg
     1321 gcccctctat ctcttccacc ctggtgcgca gacgctcaac gccgcgatca gcgtccgcgc
     1381 acgtgcccgc ctcgagtcgc ggaccgactc gcgcatcgtc ctgcgctcgg aagacaccgg
     1441 cgtcacggtc gaggccgacg accccgcggc gctgcggcac gaaccgcgcc tgcggctgct
     1501 gtcgctcctc gcctcgttct tcagcgtccg cggcgtcacg ctgaccacca cgtccgagtc
     1561 gccgaccggc gccgggctgg ccgggtcgtc cgcgctcaat gtggccgtgt gcgccgcgct
     1621 ggccgagtgg aaacgggaac attacgagcc cgaggcgctg ctgcagctcg ccatgaacgt
     1681 cgaggcccag accatcaacg tccccaccgg gctgcaggat taccggccgg cgctgtacgg
     1741 tggcctggcg gcgctggagc tcgaggtgga cggcatccac cgggtgccgc tcgacgtgga
     1801 cctgcgggag ctgaaccggc gcatcgtgct ctgctatacc ggcgagccgc atttctcggg
     1861 caccaacaac tgggagatca ccaagaagca catcgacggc gaccagcacg tcttcgactg
     1921 cttcgagcgg attcgcgaca ccgcagccgc catgcggacg gcgctcgtca agggcgactg
     1981 ggaggcgacc ggccgcgcca tcgccgacga gtgggagaac cgcaagcgcc tggcgcccgg
     2041 cgtgacgaca cccctcatcg acgagctgat cgcgcgtgcc cgagc
//
LOCUS       DASSYW010000295         2191 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1698915, whole genome shotgun sequence.
ACCESSION   DASSYW010000295 DASSYW010000000
VERSION     DASSYW010000295.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2191)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2191)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2191
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1698915"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(113..946)
                     /locus_tag="VFN38_04610"
     CDS             complement(113..946)
                     /locus_tag="VFN38_04610"
                     /inference="COORDINATES: protein motif:HMM:NF025736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HET9011070.1"
                     /translation="MRRLASCLLVVVTVSATPLWAQDTDAVSTAEPKQDQPKKEEAPP
                     PPHGSTGWLSLLKDSAGDFVAFPKRPSTWVLLGTGAAAALAVHPADDYVATHIVGNDT
                     AEAVFSLGQWVGSTYVQVGSAAGLWAIGRYVVAPAADQPRTNKYSEIGFDLIRAQILS
                     QALVQGMKNSIRRDRPTGECCSFPSGHAATAFAMASVLERHFGYRASAPALAAATYVA
                     TSRLVDNRHFVSDVAFGAFAGIASGWTVVGTRGRNRLAFAFEPVPVHGGMMIALTRVD
                     N"
     gene            1092..1778
                     /locus_tag="VFN38_04615"
     CDS             1092..1778
                     /locus_tag="VFN38_04615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011071.1"
                     /translation="MTHSIHRAIVLAAACLALAAATAGAQDAPRSSRSLVPATFPRWD
                     VGGSIGFLAVKSSDTLTTWADWEQKAEYRFDLGRYWTTHLKTDVAVSASNPWQDYESL
                     EVSVPGIPRGFAYQNVDRQLFNVAPAVTWQFRENTFMHPYVSGGVRIGLLQEHRHNEN
                     DTIRSGSITYQLPPVDERRTVVLARPFVAGGFKSYLSRSVFVRTEGRAGFADDGMRQL
                     TGVIGIGVDF"
     gene            1794..2180
                     /locus_tag="VFN38_04620"
     CDS             1794..2180
                     /locus_tag="VFN38_04620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011072.1"
                     /translation="MKTHMHTRLAAALLLLSLAMPVSAQDTARDWTTLAASLAPGARV
                     ELDLADGTHVDGTVLAQEEGRFVFNPKTRIPVAPWRVEYSEIRALDVKHGRDGMRPGN
                     KVLLGAGIGVGTFLLLAAILVASAYD"
BASE COUNT          349 a          740 c          743 g          359 t
ORIGIN      
        1 agattcgcgc gtggcacgaa cgctacggct ggctgacgaa gacggtggac gtgaaggccg
       61 gcgcgacggc gacgatcgac ttcgcctaca ccggccagga acacgcgggc gcctagttgt
      121 cgacgcgcgt gagcgcgatc atcatgccgc cgtggaccgg caccggttcg aaggcgaagg
      181 ccagccggtt gcgcccccgc gtgccgacca cggtccagcc gctggcgatg cccgcaaacg
      241 cgccgaatgc cacgtcgctg acgaaatgcc ggttgtcgac gaggcgcgac gtggccacgt
      301 aggtcgccgc cgcgagcgcc ggcgccgacg cccgatatcc gaagtgccgc tcgagcacgg
      361 acgccatggc aaacgccgtc gcggcgtgac ccgatgggaa ggaacagcat tcgccggtcg
      421 gccgatcgcg tctgatcgag ttcttcatcc cctgcaccag cgcctgcgag aggatctgcg
      481 cgcgaatcag gtcgaagccg atctccgagt acttgttggt tctcggttgg tcggcggccg
      541 gtgccaccac gtagcggccg atcgcccaca gcccggcggc cgaccccacc tgcacatacg
      601 tgctgccgac ccactgcccg aggctgaaca cggcttcagc ggtgtcgttg ccgacgatgt
      661 gcgttgcgac gtagtcgtcc gcggggtgca cggccaatgc cgcggccgcg cccgtgccga
      721 gcagcaccca cgtcgatggc cgcttgggaa acgccacgaa gtcgccggca gagtctttca
      781 gcagcgacaa ccagcccgtg ctgccgtgcg gtgggggcgg cgcctcttcc ttcttgggtt
      841 ggtcctgctt cggttcggcc gttgagacgg cgtccgtgtc ttgcgcccag agcggtgtcg
      901 ctgaaacggt gacgacgaca agaagacagc tcgcgagacg tctcatcact tccacctcaa
      961 gagtgtgctg agggaggctc gtcggcgacc gttgcaacca cggtaccacc tcgggccgct
     1021 ctagatccgc cagttacggg cgtctgagct ggtttgctgc cgcctggcac cttgagtgtc
     1081 aggaggcaga cgtgacccat tcaatccacc gcgccatcgt tctcgcggcc gcgtgcctgg
     1141 cactggcggc cgctacggcc ggtgcccagg acgccccgag atccagccga tcgctcgtgc
     1201 cggccacgtt cccgcgatgg gacgtcggcg gcagcatcgg cttcctcgcc gtcaagtcgt
     1261 ccgacacgct gacgacgtgg gccgactggg agcagaaagc ggagtatcgc ttcgacctgg
     1321 ggcggtactg gacgacgcat ctgaagacgg acgtggccgt gtcggcctcc aacccgtggc
     1381 aggactacga aagtctggaa gtgtcggtcc cgggcattcc gcgcgggttc gcgtatcaga
     1441 acgtcgatcg gcagctgttc aacgtggcgc cggcggtcac ctggcagttc cgcgaaaaca
     1501 ccttcatgca cccgtatgtc agcggcggcg tgcggatcgg cctcctgcag gagcatcgcc
     1561 acaacgagaa cgacacgatt cgcagcggct cgatcaccta ccagctgccg cccgtggacg
     1621 agcggcggac cgtggtcctg gcgcgtccgt tcgtcgcggg cggcttcaag tcctatctct
     1681 cacgctccgt attcgtgcgc accgaagggc gcgccggctt cgcggatgac gggatgcgcc
     1741 agttgacggg cgtcatcggc atcggcgtcg atttctagtc gaggagactg atcatgaaga
     1801 cgcacatgca cacccggctg gccgcggcgc tgctcctgct gtcgctcgcg atgcccgtct
     1861 cggcgcagga cacggcccgc gactggacga ccctcgcggc gtcgctcgcg cccggcgccc
     1921 gcgtcgagct cgatctcgcc gatggcaccc acgtggacgg caccgtgctg gcgcaggagg
     1981 aagggcgctt cgtgttcaac ccgaagacgc gcatccccgt ggcgccgtgg cgtgtcgagt
     2041 attcggagat tcgtgcgctc gacgtcaagc acgggcgcga cggtatgcgg cccggaaaca
     2101 aggtcctgct gggcgcggga atcggcgtcg ggacgtttct gctgttggcc gcgatcctcg
     2161 tggcctccgc gtacgactag ctgccggccg a
//
LOCUS       DASSYW010000296         4404 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1822362, whole genome shotgun sequence.
ACCESSION   DASSYW010000296 DASSYW010000000
VERSION     DASSYW010000296.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4404)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4404)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4404
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1822362"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..997)
                     /locus_tag="VFN38_04625"
     CDS             complement(<1..997)
                     /locus_tag="VFN38_04625"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HET9011073.1"
                     /translation="MPLRLISPDGTKAYDLRDGVPLIVGRAPTCDLPVFHPTISRRHA
                     ELTSDGHVLSLRDLGSSNGTFVNGAKIEKGKATIDDLLAFGKVGFRLESFGAPTPSAS
                     HPGVHPTTIGATIVRQIPMRDPTAAIVSLNSPAITPGALSRAIVSPLSAPPSDKSQQK
                     LATLLEVSKGLTRAVDVGTILDKIVGYAYGTLEVDRVAILLCDENDELVPKIARDKRG
                     GDVPRSVPQSIARQAVVEKVALLTDNASEDERFGGQSIVMQQVRSAICAPLIGSEDRV
                     LGVLYVDNPSMAHRFSDDDLEFLVAFAGIAAVAIENSQFAERIRREGIVRSNFERY"
     gene            complement(1309..2814)
                     /locus_tag="VFN38_04630"
     CDS             complement(1309..2814)
                     /locus_tag="VFN38_04630"
                     /inference="COORDINATES: protein motif:HMM:NF012640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate-binding protein"
                     /protein_id="HET9011074.1"
                     /translation="MSFDEFRLRARPDHLVPVWREILLDTDTPVTAFAKLREGPFAFL
                     LESAPAGGETWSRYTFLGSAPRGAWRLRDGVVDEWTPERGWHGARTPARPLDDLNVRL
                     RAHPPVDAPELGAFWSGAVGFFSYDTVRLIERLPAPPPRGDAAPDALFVFTDAVVIID
                     NLRSQARVVVGVPVGRDLGEVALRRAHDAAVATIERTIARLRAPVSLPALDLRPDAAP
                     AVGDSSYARDRFLADVERIKEYIAAGDVFQVLLARRIRVPHDFPSEALYRALRALNPS
                     PYMYHLVLDGLELVGSSPELLVRVDAGRVTVRPIAGTRPRGATAAADAAMAAELASDE
                     KERAEHVMLVDLGRNDVGRLAEYGSVAVTEFMTIERYSHVLHLVSQVDGRLRPGLDAL
                     DALRATFPAGTMTGAPKVRAMEIIDELEPERRGAYAGAVGYIGAGGARMDLAITIRTC
                     VLFEGVASVQTGAGIVQDSVPASEWAETENKARALLTAIGRVREAIGRSGS"
     gene            2873..>4404
                     /locus_tag="VFN38_04635"
     CDS             2873..>4404
                     /locus_tag="VFN38_04635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011075.1"
                     /translation="MYRLFAAASAACVLLVGLGSGPAGAQSWNDPRSRALVERATARR
                     IEQLADTGLQDFKAIAHGYVTFLAQMGEGLAEPPKVVKADELVNEVFWKAPNLSKQRI
                     VGRRDTLLLPTDINYHRDHLGIVQNNFPAIIRLGDGDEVRDVPHPLSPQGLAAYDFAL
                     TDSLPLHLPGRTIMLYEVKVRPRDDRQPRIIGAVYIDRDDAQVVRMAFNFTRAAFLDS
                     ALEDLFVVIENGLIAGRFWLPRKQEIEIRRGGTWLDFPIRGIIRGRWEIGDYQVNADL
                     PRAIFIGPEIVVAPAAVRDTFHFSGRVLDSLPPDVRAVTDAEIRSVQEEARALVRAQA
                     LRRPQTLVLSALGASDFVRFDRAEGLAVGGGIATRFGRGFDAQLRARYGIDDRAVKGR
                     AAAEWRSPSVGVRLVAMRDFREAGDVQERSTVVNSLAAQEFGADATDPYGVEGVGLGL
                     DALAPGGLRLRLDAMVERQRPLEIRAVPAQGTFPRILPATPLRAVRVSLGAERATALS
                     VLG"
BASE COUNT          612 a         1583 c         1588 g          621 t
ORIGIN      
        1 agtagcgctc gaagttgctc cgcacgatcc cctcgcgccg gatgcgctcg gcgaactgcg
       61 agttctcgat ggccaccgcg gcgatgccgg cgaacgcgac gaggaactcc aggtcgtcgt
      121 cgctgaagcg gtgggccatg ctcggattgt ccacgtacag cacgccgagc acgcggtcct
      181 cgctcccgat gaggggggcg cagatggccg agcgcacctg ctgcatcacg atggactgcc
      241 cgccgaagcg ctcgtcctcg ctggcgttgt cggtgaggag cgcgaccttc tccaccaccg
      301 cctgccgcgc gatggactgc ggcaccgaac gggggacgtc gccgccgcgc ttgtcgcggg
      361 cgatcttcgg caccagctcg tcgttctcgt cacagagcag gatcgccacg cggtccacct
      421 cgagcgtccc gtaggcgtag ccgacgatct tgtccaggat cgtgcccacg tccacggcac
      481 gcgtgagccc cttcgacacc tcgaggagcg tcgcgagctt ctgctggctc ttgtcgctgg
      541 gcggggcgct gagcggcgag acgatggcgc gggagagggc gccgggcgtg atggccgggc
      601 tgttcagcga gacgatcgcc gcggtgggat cgcgcatcgg gatctgccgc acgatcgtcg
      661 ccccgatggt cgtggggtgt accccggggt gcgaggccga cggggtgggg gcaccgaacg
      721 actccagccg gaacccgacc ttgccgaacg cgagcagatc gtcgatcgtc gccttgccct
      781 tctcgatctt ggcgccgttg acgaaggtcc cgttgctcga ccccagatcg cgcagcgaca
      841 ggacgtggcc gtccgacgtc agctcggcgt ggcgcctgga gatggtcgga tggaagaccg
      901 gcaggtcaca ggtcggcgcc cgccccacga taagcggcac cccatcgcgg agatcgtagg
      961 ccttggtacc gtcggggctg atgaggcgga ggggcatcga gcgtcaaata tggagccgca
     1021 gtgcggggaa tcctagcgat tcgccacgat ttgattcggt aaagggcgtg tagaggcggt
     1081 tgggggcgga ataactgcgc ggcggaggtt ggtacagggt acaaggtaca gggtagcggg
     1141 tatccggcat ggccggcccg ctccctgctc gaggccgcgg ccggcttcag cccacggcga
     1201 cggctgcatc gtacggaggg gtaccccgca ccaggcatcc tgtacccgat accccgtacc
     1261 cacctccgcc ccgcattcca accccgttcg acgcccttcc aacgcccgtc aggagcccga
     1321 ccggccgatc gcctcccgca cccgcccgat ggccgtgagc agcgcccgcg ccttgttctc
     1381 cgtctccgcc cattcgctgg ccgggacgga gtcctggacg atcccggcgc ccgtctggac
     1441 cgacgccacc ccctcgaaca gcacgcaggt gcggatcgtg atcgcgaggt ccatccgcgc
     1501 cccgcccgcg ccgatgtagc ccaccgcccc ggcgtaggcg ccgcgccgct ccggctccag
     1561 ctcgtcgatg atctccatcg cgcgcacctt gggcgcgccg gtcatcgtcc cggccgggaa
     1621 ggtggcccgc agggcgtcca gcgcgtcgag cccgggccgc agccggccgt ccacctggct
     1681 caccagatgg aggacgtggg agtagcgctc gatggtcatg aactcggtga ccgccacgct
     1741 gccgtactcg gcgaggcgtc ccacgtcgtt ccgccccagg tccacgagca tcacgtgctc
     1801 ggcccgctcc ttctcgtcgc tcgccagctc ggccgccatc gccgcgtcgg cggcggccgt
     1861 cgccccgcgc ggccgcgtgc cggcgatggg ccgcaccgtc acccggccgg cgtccacccg
     1921 caccagcagc tccggcgagc tccccacgag ctcgagcccg tcgagcacga ggtggtacat
     1981 gtacggcgat ggattgagcg cccgcagcgc acggtacagc gcctcggacg ggaagtcgtg
     2041 cggcacgcgg atgcgccgcg cgagcagcac ctggaagacg tcgcccgccg cgatgtattc
     2101 cttgatccgc tccacgtcgg cgagaaatcg gtcgcgcgcg tacgacgagt cccccaccgc
     2161 cggcgccgca tcgggacgca ggtccagcgc ggggagcgac accggcgcgc gcaggcgcgc
     2221 gatcgtgcgc tcgatggtcg cgacggcggc gtcgtgcgcg cggcgcagcg cgacctcccc
     2281 gaggtcgcgc cccaccggca cgcccacgac gacgcgcgcc tgcgagcgca ggttgtcgat
     2341 gatgacgacg gcatcggtga acacgaacag cgcgtccggt gcggcatcgc cgcgcggcgg
     2401 gggcgccgga agccgctcga tcaggcgcac ggtgtcgtag ctgaagaagc cgaccgcgcc
     2461 gctccagaat gcgccgagct ccggggcgtc caccggggga tgggcgcgca gccggacgtt
     2521 caggtcgtcg agcgggcgcg cgggggtgcg cgcgccgtgc cagccgcgct ccggcgtcca
     2581 ctcgtccacc acgccgtcgc gcagccgcca cgcccctcgc ggcgcgctgc cgaggaaggt
     2641 gtagcgcgac caggtctccc cgcccgccgg cgcgctttcc agcaggaagg cgaacgggcc
     2701 ctcgcgcagc ttggcgaacg ccgtcacggg ggtgtcggtg tccagcagga tttcgcgcca
     2761 cacgggcacg agatggtccg gccgggcgcg gagtcgaaac tcgtcgaagc tcatcggtgc
     2821 gtcgggggcg cgcgtgcttg tccggcgtgg ggacgccggc gacctttcga gaatgtatcg
     2881 cctgttcgcc gcggcaagcg ccgcctgcgt gctgctcgtg gggctcggat cgggtccggc
     2941 cggtgcccag agctggaacg atccgcgctc gcgcgccctc gtggagcgcg ccacggcccg
     3001 tcgcatcgag cagctcgccg acacggggct ccaggacttc aaggcgatcg cgcacggcta
     3061 cgtcaccttc ctcgcccaga tgggggaggg gctcgccgag ccccccaagg tggtgaaggc
     3121 cgacgagctg gtgaacgagg tgttctggaa ggcgcccaac ctgagcaagc agcgcatcgt
     3181 ggggcggcgc gacaccctcc tgctccccac cgacatcaac taccaccgcg accatctcgg
     3241 catcgtccag aacaacttcc cggcgatcat ccggctgggc gacggcgacg aggtgcgcga
     3301 cgtgccgcat cccctctcgc cgcaggggct cgcggcgtac gacttcgcgc tcaccgactc
     3361 gctcccgctc cacctgcccg ggcgcacgat catgctgtac gaggtgaagg tccgcccgcg
     3421 cgacgaccgg cagccgcgca tcatcggcgc cgtgtacatc gaccgcgacg acgcgcaggt
     3481 ggtgcgcatg gcgttcaact tcacccgcgc ggcgttcctc gactcggcgc tcgaggacct
     3541 gttcgtcgtg atcgagaacg gcctgatcgc cgggcgcttc tggctgccgc gcaagcagga
     3601 gatcgagatc cgccggggcg gcacctggct ggactttccc atccgcggca tcatccgcgg
     3661 gcggtgggag atcggcgact accaggtgaa cgcggacctg ccgcgggcga tcttcatcgg
     3721 acccgagatc gtggtggcgc cggccgcggt gcgcgacacc ttccacttct ccgggcgcgt
     3781 gctcgactcg ctgcctccgg acgtgcgtgc ggtgaccgac gcggagatcc ggagcgtgca
     3841 ggaggaagcg cgggcgctgg tgcgggcgca ggcgctgcgc cggccgcaga cgctggtgct
     3901 ctccgcgctg ggcgcctcgg acttcgtgcg cttcgaccgc gccgaggggc tggcggtggg
     3961 cggcgggatc gcgacgcggt tcgggcgcgg cttcgacgcg cagctccgcg cgcgctatgg
     4021 gatcgacgac cgcgcggtga aggggcgagc ggcggcggag tggcgctcgc cgagcgtcgg
     4081 cgtgcggctc gtcgccatgc gcgacttccg cgaggcggga gacgtccagg agcgctcgac
     4141 cgtcgtgaac tcgctcgcgg cgcaggagtt cggggccgac gccaccgatc cgtacggcgt
     4201 ggagggggtg gggctcgggc tcgacgcgct cgcccccggc ggtttgcggc tgcgactcga
     4261 cgcaatggtc gagcgccagc gaccactgga gatccgcgcc gtgccggcgc aggggacctt
     4321 cccgcgcatc ctccccgcca caccgctgcg cgccgtgcgc gtgtcgctgg gcgccgagcg
     4381 cgccacggcg ctctcggtgc tggg
//
LOCUS       DASSYW010000297         2168 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_846808, whole genome shotgun sequence.
ACCESSION   DASSYW010000297 DASSYW010000000
VERSION     DASSYW010000297.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2168)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2168)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2168
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_846808"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..656)
                     /locus_tag="VFN38_04640"
     CDS             complement(<1..656)
                     /locus_tag="VFN38_04640"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HET9011076.1"
                     /translation="MIRPTGLAGRLAATFVHSKLTPLVILASLLLGVYAVVALPREEE
                     PQIIVPMFDVAIAMPGATAAEVEQRLARPVEKLLWEVPGVEYLYSTSSAGGAMVIVRF
                     LVGQDETRALVLLNQKLAANAAQLPSGASPPVVTARSIVDVPVMALTLWGPGYDDVQL
                     RQMAGQLREALKELPDISEISVIGGRPRRITVEIDPAALAGRRVDPLSVHRAIAGANV
                     R"
     gene            complement(653..1684)
                     /locus_tag="VFN38_04645"
     CDS             complement(653..1684)
                     /locus_tag="VFN38_04645"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HET9011077.1"
                     /translation="MASRFEAGGIVRASVTTLVASRVMAPVTAVHVRPGDRVRRGATL
                     VTLDAREIDANRTRAAATSTSAAESVRAAEADLRSTESAVVLARATHDRIQGLFAKRS
                     ATAQEVDQTVAALSAAEAQAEAARARLSAATATRDAARAGADSARINATYSVLVAPFD
                     GIVTERRVDPGALATPGAPLVTVEDASTFRLEVPIDEARSGFVAPGQQVEVRVDEPSA
                     PAAAEWLRGRIAEIARLDPASHTFVVKIDLPSGACTRSGLFGRARFSGPARRALVVPR
                     SAVIPRAQLSFVYLVDADSRARLRAISAGAEDGDRREVLAGVHEKDAVVAAPPPSLTD
                     GVRVTGGGR"
     gene            complement(1827..>2168)
                     /locus_tag="VFN38_04650"
     CDS             complement(1827..>2168)
                     /locus_tag="VFN38_04650"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HET9011078.1"
                     /translation="GGDTAAVRAAAAAVARARAEKDDARAAVHVDVVKAFHQLETARA
                     RRAASSAAVEQARESQRIVRDRFDAGLAPVNDVLRASTAVLDADSNRIAALVDTIVAA
                     AALRRAIGRVP"
BASE COUNT          321 a          770 c          778 g          299 t
ORIGIN      
        1 cggacgttcg cgcccgcgat cgcgcgatgc accgacagcg gatccacccg gcgccccgcg
       61 agcgccgccg gatcgatctc taccgtgatg cgccgcggcc ggccgccgat gacggaaatc
      121 tcagagatat ccggcagctc cttcagcgcc tcccggagct gccctgccat ttgacgaagt
      181 tgcacgtcgt cgtatcccgg tccccagagc gtcagcgcca tcacgggaac gtcgacgatc
      241 gagcgtgccg tgacgaccgg tggcgacgcg ccgctgggga gctgtgccgc gttggcggca
      301 agcttctgat tgagcagcac gagggcgcgc gtctcgtcct gtccgacgag gaaccggacg
      361 atgaccatcg ctccgccggc gctcgacgtg gagtagagat actcgacacc cgggacttcc
      421 cagaggagct tctcgacagg acgagcgagg cgctgttcga cttctgccgc ggtcgccccg
      481 ggcatggcga tggccacgtc gaacatcggc acgatgatct gcggctcctc ctcgcgcggg
      541 agcgcgacga ccgcgtagac gccgagcagg agcgaggcga ggatgacgag cggcgtcagc
      601 ttcgaatgga cgaacgtcgc cgcaaggcgt ccggcgagtc cggtgggccg gatcatctgc
      661 cgccacccgt cacgcgcacg ccgtccgtca acgacggcgg aggagcggcg acgacggcat
      721 ccttctcgtg caccccggcg agcacctcac gtcgatcgcc gtcctcggcg cctgccgaga
      781 tcgcacgcag ccgcgcgcgc gaatcagcgt cgacgaggta gacgaacgac aactgggcgc
      841 gagggatgac ggcggagcgc ggtacgacga gcgcccgccg cgccggcccg gagaatcgcg
      901 cccgcccgaa caatcccgag cgggtgcacg cgccagacgg gagatcgatt ttgaccacga
      961 acgtgtgtga cgccgggtcg aggcgcgcga tttccgcaat ccggccgcgg agccattccg
     1021 cagccgcggg agccgatggc tcgtcgaccc tcacctcgac ctgctgaccg ggcgcgacga
     1081 atcctgaccg ggcctcgtcg atcggaactt cgaggcggaa ggtggacgcg tcttcgaccg
     1141 tcacgagcgg tgcccccggc gtcgccagcg cgccggggtc cacgcggcgc tcggtgacga
     1201 tcccatcgaa tggcgccacg agcaccgaat acgtcgcgtt gatccgcgca ctgtccgcgc
     1261 cggcccgggc ggcgtcgcgt gtcgcggttg ccgccgacag ccgcgcgcgc gccgcctccg
     1321 cctgcgcttc ggccgcggaa agcgcggcga cggtctgatc tacttcctgc gcggtcgccg
     1381 accgtttcgc gaacagtccc tggatgcggt cgtgcgtcgc ccgggcgagc acgactgccg
     1441 attccgtgga acggaggtct gcctcggcgg cgcggacgga ttcggcggcg gaggtcgatg
     1501 tcgccgcggc gcgggttcga ttggcgtcga tctcgcgcgc atccagcgtg acgagggtgg
     1561 cgccgcggcg gacgcgatcg ccgggacgca cgtgcacggc cgtgaccggc gccatcacgc
     1621 ggctcgcgac cagcgtcgtc acggaggcgc gcacgatccc gccggcctcg aaacgactcg
     1681 ccatgtcggt caattccacg cgggcaatgg tgacgggcac cggagcggat tcggacgtct
     1741 gctccgggcg ggacgccgag caggccgtgg tgacggctgc ggcgacgagt aatcctgcgg
     1801 cagtgcgttt cactgaagcc tcgcaatcat gggacgcggc cgatcgcgcg tcgcagcgcc
     1861 gcggcagcca cgatggtgtc gacgagggct gcgatgcggt tggagtctgc gtccagcacg
     1921 gcggtggacg cgcgcaggac gtcgttcacc ggcgcgaggc ccgcgtcgaa ccgatcgcgc
     1981 acaatgcgct ggctctcgcg ggcctgttcc accgctgcac tgctggccgc acgccgcgcc
     2041 ctggccgtct cgagctggtg gaacgccttg acgacgtcga catggacggc ggcgcgcgcg
     2101 tcgtcctttt cggcccgcgc ccgcgcgacg gcggccgccg ccgcgcgcac cgccgcggtg
     2161 tcgccgcc
//
LOCUS       DASSYW010000298         3277 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_943625, whole genome shotgun sequence.
ACCESSION   DASSYW010000298 DASSYW010000000
VERSION     DASSYW010000298.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3277)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3277)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3277
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_943625"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..451)
                     /locus_tag="VFN38_04655"
     CDS             complement(<1..451)
                     /locus_tag="VFN38_04655"
                     /inference="COORDINATES: protein motif:HMM:NF026066.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HET9011079.1"
                     /translation="MDPRSAAHALSQIAAHLELRGESRFRIRAYEQAAAAIAALETDD
                     LGALDRAGTLAKTRGVGPAMLSILRELIETGESRYLEQLRADTPAGLLDLLRVPGLAS
                     PRIHQLHESLDIDSVDALEAAARDGRLAKLKGFGPKTAEKLLRGIEFY"
     gene            complement(490..939)
                     /locus_tag="VFN38_04660"
     CDS             complement(490..939)
                     /locus_tag="VFN38_04660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011080.1"
                     /translation="MADEIVQPHIASLEYDGRRFNVSCRIAFDGIEYVGRLWFADESW
                     DDGGLPDRGALPGRTREEVIAFARRLTQQDLMLRYRRALAEKRRFTGLRRATDEILGK
                     IRYLNQVAISMRAGLLDTDGAAAEIDLTERQLHEIVERLKTHAGVEG"
     gene            complement(947..1795)
                     /locus_tag="VFN38_04665"
     CDS             complement(947..1795)
                     /locus_tag="VFN38_04665"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HET9011081.1"
                     /translation="MPLYWAEYGDPEAPPLLLLHGGPGASHDYLLPQMLALAEEHRLV
                     CYDQRGGGRSRSDDDRASIGWQEQVADVERVALELGVAPLDLVGYSWGGLLAMLYAIE
                     AAAGRIATPPASLALIDPAPVDRRFRETFEAEFAARQAGPAVAALRDELQRSGLKERD
                     PEAFRQRSFELSVAGYFADPRRARDLTPFRVTGRVQQSIWQSLGAYDILPALGTVRLP
                     AFVVHGREDPIPLASSQAAARALGTECIVLHDCGHVPYVEQPTQLFPPLLAFLRERRV
                     STHSLR"
     gene            complement(1923..2825)
                     /locus_tag="VFN38_04670"
     CDS             complement(1923..2825)
                     /locus_tag="VFN38_04670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone deacetylase"
                     /protein_id="HET9011082.1"
                     /translation="MSLSVWSSARYTFPLPAGHRFPVEKYAMLRERVVSEGIVAPERV
                     LDPAAATDDVLRLVHTADYVERFVGGDLSPAEVRRIGFPWSPALVERSRRAVGGTVEA
                     ARHALVHGTAMNLAGGTHHAFADHGEGFCVFNDVAIAIRLLRGEGALRRAAVIDLDVH
                     QGNGTHAIFAGDEDVFTFSMHGGRNYPFEKVPGTLDIELDDGTPDAEYLEALSDALPR
                     VLHAARPDLVLYLAGADPHEGDRLGRMKLTFDGLARRDVMVLQSCREVGLPVAVMIAG
                     GYGARIEDTVAVHLTTARILAGMR"
     gene            complement(2854..>3277)
                     /locus_tag="VFN38_04675"
     CDS             complement(2854..>3277)
                     /locus_tag="VFN38_04675"
                     /inference="COORDINATES: protein motif:HMM:NF024578.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HET9011083.1"
                     /translation="TDDVEKIDAAGEARVVAVAERVVREIADRPARLTPVRVAAPPPV
                     AGGREGSNVYLGSIPDMGASEVPGLRLSGVRAGSPADAGGLRAGDVIVALGGRPVKDL
                     YSYSEALYAHKPGERVEIVYLRGDARQTTTVTLGKRGQ"
BASE COUNT          482 a         1174 c         1176 g          445 t
ORIGIN      
        1 ggtagaactc gatcccgcgc agcagcttct cggccgtctt ggggccgaag cccttgagct
       61 tcgccagccg gccatcgcgt gccgcggctt ccagcgcgtc cacggagtcg atgtcgagcg
      121 actcgtgcag ctgatggatg cgtggcgacg cgagccccgg cacgcggagc aggtcgagca
      181 gtccggccgg cgtgtcggcg cgcagctgct cgaggtatcg cgactccccg gtttcgatga
      241 gctcgcgcag gatggagagc atggccggtc ccacgccgcg agtcttcgcg agcgtccccg
      301 cgcggtcgag tgcgcccagg tcgtcggtct ccagggcggc gatcgccgcc gccgcctgct
      361 cgtacgcgcg gatcctgaat cggctctcgc cgcggagctc gaggtgggcg gcgatctgcg
      421 acaacgcgtg cgcggcggag cgggggtcca tcactcaaca taacgtgaac ggtccacggt
      481 tcacgccatt tacccctcca cccctgcgtg cgtcttcagc cgctcgacga tctcgtgcag
      541 ctgccgctcg gtgaggtcga tctcggcggc cgccccgtcg gtgtcgagca ggccggcgcg
      601 catcgagatc gccacctgat tcaggtagcg gatcttgccc aggatctcgt cggtggcgcg
      661 gcgcagcccg gtgaagcgcc gcttctcggc gagcgcgcgg cggtagcgga gcatgaggtc
      721 ctgctgcgtg aggcggcgcg cgaaggcgat cacctcctcg cgggtgcggc cgggcagcgc
      781 gccgcggtcg ggaaggccgc cgtcgtccca gctctcgtcg gcgaaccaga gccgacccac
      841 gtactcgatg ccgtcgaagg cgatccggca ggagacgttg aagcgacgtc cgtcgtactc
      901 gagcgatgcg atgtgcggct gcacgatctc gtcggccacg gatcggttac cggaggctgt
      961 gggtggagac gcgtcgctcg cgcaggaagg cgagcagcgg cggaaagagc tgggtgggct
     1021 gctcgacgta cggcacgtgt ccgcagtcat ggaggacgat gcactccgtg ccgagggcac
     1081 gcgcagccgc ctgcgaggac gccaagggta tcggatcctc acgtccgtgg acgacgaagg
     1141 ccggcaaccg gaccgtaccg agcgcgggga gtatgtcgta cgcgccgagc gactgccaga
     1201 tggactgctg cacgcggccg gttacgcgga agggcgtcag atcgcgggca cgtcggggat
     1261 ccgcaaaata acccgcgacg ctcagctcga acgaccgctg ccggaacgcc tccggatccc
     1321 gctccttgag gccggagcgc tggagctcgt cccgcagcgc ggcaacggcc ggcccggcct
     1381 gtcgcgccgc gaactcggcc tcgaaggtct cgcggaagcg tcgatcgacg ggcgccggat
     1441 cgatcagcgc gaggctggcg ggcggcgtcg cgatgcggcc ggccgccgcc tcgatggcgt
     1501 agagcatcgc gagcagccca ccccacgagt agcccacgag gtcgagcgga gctaccccca
     1561 gctcgagtgc gacgcgctcg acgtcagcga cctgctcctg ccacccgatc gacgcacggt
     1621 cgtcgtcgga gcgcgaacgt ccgccgccgc gctggtcgta gcagacgagc cgatgctcct
     1681 ccgccagggc gagcatctgc ggcagcaggt agtcgtggct cgcgcccgga cctccgtgca
     1741 gcagcagcag cggcggcgcc tcgggatcgc cgtactcggc ccagtagagc ggcaccgggg
     1801 tggaggtggt gtaaccgtgc gcgcgcggag gaggaatcgg tggcatgggt ggcagtgtgg
     1861 cggacaggcc atggcggcga aaggggcccg gccggaccgc gcaggccggg cgcgctcgag
     1921 gctcagcgca ttcccgccag gatccgcgcc gtggtcaggt ggaccgccac cgtgtcctcg
     1981 atcctcgccc cgtagccgcc ggcgatcatc acggccacgg gaagccctac ttcgcgacag
     2041 gactgcaaca ccataacgtc gcgccgggca agcccgtcga aggtcagctt catccgcccc
     2101 aggcggtctc cctcgtgcgg gtcggccccg gcgaggtaga gcacgaggtc gggccgcgcg
     2161 gcgtgcagca cccgtggcag cgcgtccgag agcgcctcca ggtactccgc atccggcgtc
     2221 ccgtcgtcca gctcgatgtc gagggtgccg ggcaccttct cgaacggata gttgcggccg
     2281 ccgtgcatgc tgaaggtgaa cacgtcctcg tcgccggcga agatggcgtg cgtgccgttg
     2341 ccctggtgca cgtcgaggtc gatcaccgcc gcgcggcgaa gcgcgccctc gccgcgcagc
     2401 aggcggatcg cgatcgcgac gtcgttgaac acgcagaatc cttcaccgtg gtccgcgaac
     2461 gcgtggtgcg tgccgccggc gagattcatc gccgtgccgt gcaccagcgc atggcgtgcc
     2521 gcttccaccg tgccgccgac agcgcgtcgc gagcgctcca ccagcgcggg cgaccacgga
     2581 aagccgatcc ggcgcacctc ggccggcgag agatcgccgc ccacgaaccg ctcgacgtag
     2641 tccgccgtgt gcacgagccg aagcacgtcg tccgtcgccg ccgcaggatc gagcacgcgc
     2701 tccggcgcga cgatcccctc cgagacgacg cgctcgcgca gcatggcgta cttctccacc
     2761 gggaagcggt gaccggcggg aagcggaaag gtgtagcggg ccgacgacca gacgctgagc
     2821 gacatcagcg tgcgccgcgc acccgcgcac gcatcactgg ccgcgcttgc ccagcgtgac
     2881 ggtcgtcgtc tgccgggcgt cgccgcgcag gtagacgatc tccacgcgct cccccggctt
     2941 gtgcgcgtag agcgcctcgc tgtagctgta gaggtccttc accggccgac cgccaagcgc
     3001 gacgatcacg tccccggcgc gcaggcctcc cgcgtcggcg gggctgccgg cgcgcacgcc
     3061 actgagccgc agccccggca cctcggacgc gcccatgtcg gggatcgagc cgaggtagac
     3121 gttggagccc tctcgcccgc cggcgaccgg cgggggcgcg gccacgcgca ccggcgtcag
     3181 acgcgccggc cggtcggcga tctcgcgcac gacgcgctcc gccaccgcca ccacgcgcgc
     3241 ctcgcccgcg gcgtcgatct tctccacgtc gtccgtc
//
LOCUS       DASSYW010000299         4476 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_796893, whole genome shotgun sequence.
ACCESSION   DASSYW010000299 DASSYW010000000
VERSION     DASSYW010000299.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4476)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4476)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4476
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_796893"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1537)
                     /gene="tkt"
                     /locus_tag="VFN38_04680"
     CDS             complement(<1..1537)
                     /gene="tkt"
                     /locus_tag="VFN38_04680"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004802 - transketolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HET9011084.1"
                     /translation="MPVSELDLLSINTVRTLSMDAVQKANSGHPGTPMALAPLAYALF
                     TRHMKHDPSDPHWPDRDRFVLSCGHASMLLYSALHLSGYDLTLDDIKQFRQWESRTPG
                     HPEYTHTPGVETTTGPLGQGVGNAVGMAVAEAHLAATFNRGGQAIVDHHTWFICSDGD
                     LMEGVSHEAASFAGHFKLGKLIGFYDDNRITIDGSTDLTYTDDAAKRFEGYGWQVLHL
                     ADVNDLDAIDAVIAEAKADAERPTLVVTRTHIGYGSPKKQDTAAAHGEPLGADEIVAT
                     KQALGWPKPNAAFWVPDEALANWRQAKEKGAAARAAWQRNMDSYTMAQPALAKELRRR
                     LAGELPAGWEKVIPSFTKENGGVASRAASNQVLNALVPILPELMGGSADLTPSNGTAV
                     KTWRSFAPYDKAARYLHFGIREHGMGSIMNGMALHKGVVPFGGTFLIFSDYMRPAIRL
                     AAIMKQHVIYIYTHDSIGLGEDGPTHQPVEQLSTLRAIPGLTVIRPADASETAEAWKV
                     AIAH"
     gene            complement(1635..2720)
                     /locus_tag="VFN38_04685"
     CDS             complement(1635..2720)
                     /locus_tag="VFN38_04685"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family peptidase"
                     /protein_id="HET9011085.1"
                     /translation="MQTSAATAHFARRTALATGLALLAGGCTLGGGRPLGGDAPSVLA
                     AGMSYDRDIPTTLVEEPTLSLALDRIDQHDLPLDRTYRHFGTGRGITVYVFDGGVLDT
                     HPELAGRVRRGFDAFPGDERLCNAHGTAVAGAVAGTTLGVAPLADVVDVKMVECRRLR
                     GTIDAIVRGTRWVLADHAKHPGRRAVANWSFIADTTQAIPALDSAVADLRAAGIPVIV
                     SAGNLEMDACRIAPANAPGAIVVGASRVRRTFDSTGTLIDDRAPGTAFGGCLDVFAPG
                     DSVLLPSLDAARQPTTQLWTGTSMAAGYVSGAAALYLEGHPFASADAVGAYLGATAGR
                     AVDAARSPRAGMVYVGTKAPRTTLAKR"
     gene            complement(2868..3044)
                     /locus_tag="VFN38_04690"
     CDS             complement(2868..3044)
                     /locus_tag="VFN38_04690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011086.1"
                     /translation="MPSNTTQALEDKVAKLQRAVYYLIWKRTGFGEQCVHCGHSYPGH
                     AERCKAAEVEALVR"
     gene            complement(3196..3522)
                     /locus_tag="VFN38_04695"
     CDS             complement(3196..3522)
                     /locus_tag="VFN38_04695"
                     /inference="COORDINATES: protein motif:HMM:NF033788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HET9011087.1"
                     /translation="MPVPPDRARAVAAARFRALGDETRLRLLEQLSAGERNVGELMEA
                     MGLGQSLVSHHLRALREVGLVRDRRDGRWVYYSIAEQALTSTRLTIYELEPLRSAAAR
                     EAAATE"
     gene            complement(3594..3836)
                     /locus_tag="VFN38_04700"
     CDS             complement(3594..3836)
                     /locus_tag="VFN38_04700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011088.1"
                     /translation="MDRNDKADYGDDQGTRVGAPDQGHAPAKHSDSPPARPERKTGAG
                     SEATEGTDKTGDEHDAQHRSGYGGAGGEPVKSSDQR"
     gene            4193..>4476
                     /locus_tag="VFN38_04705"
     CDS             4193..>4476
                     /locus_tag="VFN38_04705"
                     /inference="COORDINATES: protein motif:HMM:NF016430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma factor"
                     /protein_id="HET9011089.1"
                     /translation="MVSPDRLTKLFAEYHAPLLRFLTRRLGDRDWAEEVAQETFVRAL
                     KQDVIASERSWLFAVASNLVRDETRRDARRRQRLELLHEQSKADAVVEPEP"
BASE COUNT          574 a         1523 c         1707 g          672 t
ORIGIN      
        1 agtgggcgat cgccaccttc cacgcctccg ccgtctcgct cgcatcggcc ggccggatca
       61 cggtgagccc cgggatggcc cgcagcgtcg agagctgctc caccggctgg tgcgtggggc
      121 cgtcctcgcc caggccgatg gaatcgtggg tgtagatgta gatgacgtgc tgcttcatga
      181 tggccgcgag acggatcgcc ggccgcatgt agtcggagaa gatcaggaag gtgccgccga
      241 agggcacgac gcccttgtgc agcgccatcc cgttcatgat cgaccccatg ccgtgctcgc
      301 ggatgccgaa gtgcaggtac cgggcggcct tgtcgtacgg cgcgaagctg cgccacgtct
      361 tcaccgccgt gccgttgctc ggcgtgaggt cggccgagcc gcccatcagc tcgggcagga
      421 tgggcacgag ggcgttgagc acctggttgc tggccgcgcg gctggccacg ccgccgttct
      481 ccttggtgaa gctcgggatc accttctccc agccggccgg cagctcgccg gccagccggc
      541 ggcgcagctc cttggccagc gcgggctgcg ccatggtgta cgagtccatg ttgcgctgcc
      601 acgccgcccg cgccgccgct cctttctcct tcgcctgccg ccagttggcc agcgcctcgt
      661 cgggcaccca gaacgccgcg ttgggcttgg gccagccgag cgcctgcttg gtggccacga
      721 tctcgtcggc gcccagcggc tcgccgtgcg ccgccgcggt gtcctgcttc ttcgggctgc
      781 cgtagccgat gtgggtgcgg gtcaccacca gcgtcgggcg ctcggcgtcg gccttcgcct
      841 cggcgatcac cgcgtcgatc gcgtccaggt cgttcacgtc cgccaggtgc agcacctgcc
      901 agccgtaccc ctcgaaccgc ttcgccgcgt cgtcggtgta ggtgaggtcg gtgctgccgt
      961 cgatcgtgat ccggttgtcg tcgtagaagc cgatcagctt ccccagcttg aagtgcccgg
     1021 cgaacgacgc ggcctcgtgc gagacgccct ccatcaggtc gccgtcgctg cagatgaacc
     1081 aggtgtggtg gtccacgatg gcctggccgc cgcggttgaa cgtggccgcc aggtgcgcct
     1141 cggccaccgc catccccacc gcgttcccca ccccctggcc gagcgggccg gtggtggtct
     1201 cgacgccggg ggtgtgggtg tactccgggt gccccggggt gcggctctcc cactgccgga
     1261 actgcttgat gtcgtccagg gtgaggtcgt agccgctcag gtggagggcg ctgtagagca
     1321 gcatcgacgc atggccgcac gacaggacga accggtcgcg gtcgggccag tgcgggtcgc
     1381 tggggtcgtg cttcatgtgg cgcgtgaaca gcgcgtaggc gagcggcgcg agcgccatcg
     1441 gcgtgccggg gtgaccggag ttcgccttct ggacggcatc catcgacagc gtgcggacgg
     1501 tgttgatgga gagcagatct agttcggaga cgggcatgat tgagcggtag gggctgggct
     1561 gcgggcgcgc cgaaagataa accggcgggg gcggggcggc gcctgcggcg ccggcgcctc
     1621 accagccggc ggtcctaccg cttcgcgagg gtcgtccggg gggccttcgt gcccacgtac
     1681 accatgccgg cccgcggcga ccgcgccgcg tccaccgcgc ggccggccgt ggcgcccagg
     1741 taggcgccaa ccgcgtcggc cgaggcgaag ggatgcccct ccaggtagag cgcggctgcg
     1801 ccgctcacgt atcccgccgc catcgacgtc cccgtccaga gctgcgtcgt gggctggcgc
     1861 gcggcgtcga ggctcggcag cagcaccgag tcgccgggcg cgaagacgtc caggcagccg
     1921 ccgaacgcgg tgccgggggc gcggtcgtcg atcagggtgc ccgtgctgtc gaaggtgcga
     1981 cgcacgcgcg acgcgcccac gacgatggcg cccggcgcgt tggccggcgc gatgcggcag
     2041 gcgtccatct cgaggttgcc ggccgagacg atcaccggga tccccgcggc gcggaggtcg
     2101 gccaccgcgc tgtccagcgc ggggatggcc tgggtggtgt cggcgatgaa cgaccagttg
     2161 gccacggcgc gccggccggg atgcttcgcg tggtcggcca gcacccagcg ggtgccgcgc
     2221 acgatggcgt cgatggtgcc gcgcaggcgg cggcactcca ccatcttcac gtccacgacg
     2281 tcggccaggg gggcgacgcc cagcgtggtg cccgccaccg cgccggccac cgcggtgccg
     2341 tgcgcgttgc acagccgctc gtcgccggga aaggcgtcga agccgcggcg cacgcgcccc
     2401 gccagctcgg gatgggtgtc gagcacgccg ccgtcgaaca cgtacacggt gatcccgcgg
     2461 ccggtgccga agtgccggta ggtgcggtcg agggggaggt cgtgctggtc gatccggtcg
     2521 agcgccagcg agagggtcgg ctcctccacc agcgttgtcg ggatgtcccg gtcgtacgac
     2581 atgccggccg cgagcaccga gggggcgtcg ccgccgaggg gccgcccgcc gccgagggtg
     2641 cagccgccgg cgagcagggc gaggccggtg gcgagcgcgg tgcgacgggc gaagtgcgcg
     2701 gtggcggcgg aggtctgcat gcggcgacga cgatgaagga acgcggtccc atcacgcggc
     2761 ggccgccgcg cgccaccacc aaacacacaa gtcgtgccag tcagggcgcg cgcgccggaa
     2821 tcgccgcgtg gggcagcgtc cgccaggcgc gcgcgccgcg tgcggcccta ccgcaccagc
     2881 gcttccacct cggcggcctt gcagcgctcg gcgtggccgg gatacgaatg gccgcagtgc
     2941 acgcactgct cgccgaagcc ggtgcgcttc cagatgaggt agtacacggc gcgctgcagc
     3001 ttcgcgacct tgtcttccag cgcctgggtg gtgttcgagg gcatcgtggc tcgctgctcc
     3061 atggttcgtg agacggggcg ggaagatggc atgagggacg ccccgacgat aggcgcgcct
     3121 cggcggccgg tgcacggccc gctccctccc ggccacgacg tcggggtcgc ggcggggtgt
     3181 cgggtcagcg gatggtcact cggtggcggc ggcctcgcgg gccgccgcgc tgcgcagggg
     3241 ctccagctcg tagatggtga gccgggtgga ggtgagcgcc tgctcggcga tggagtagta
     3301 gacccatcgt ccgtcgcgcc ggtcgcgcac cagccccacc tcgcgcaggg cgcggaggtg
     3361 gtgggagacg agggactggc cgagccccat cgcctccatc agctcgccga cgttgcgctc
     3421 gccggcggag agctgctcga ggaggcggag ccgcgtctcg tcgccgagcg cgcggaagcg
     3481 ggcggcggcg acggcgcggg cgcggtcggg gggaacgggc atggccatat cgtatcaata
     3541 tcaattcata tggacaagtg gccggccgcg gccgacccgg ggcgccgtca ccgctaccgc
     3601 tggtcggagc tcttcaccgg ctcgccgccg gccccgccgt agccgctgcg gtgctgggcg
     3661 tcgtgctcgt ccccggtctt gtccgtcccc tcggtcgcct cgctcccggc gcccgtcttc
     3721 cgctccgggc gggccggcgg ggagtcggag tgcttcgccg gcgcgtgtcc ctggtcgggc
     3781 gcacccacgc gggtcccctg gtcgtcgccg tagtccgcct tgtcgttgcg atccatcgat
     3841 gctccctgaa gtgaggtggc aggcatgggg gcaacggatg tgccagctca tgtgcaaggc
     3901 tcctcttgcg ggacgtcacc tctttgaggg agggggtctt cgacgggacg agggatccac
     3961 gtttggggtt gggcgttggc cgtcttccgt tcggcgtttc agggcgttgc caacgcggtg
     4021 agacgcggtg aaacgccaaa cggaccaccg tcaacggaag actccagaca tggatccggc
     4081 ctgacgaggg ccggaccttc aggacgagag ccggagcttc agaacggcga ccggagcctg
     4141 aggccgatgg cagaaggttc cttcctcgtg ccggcggtgc catgttcggg tcatggtttc
     4201 gcccgatcga ctcacgaagc tgttcgccga gtatcacgcg ccgctgctcc ggttcctcac
     4261 gcgccggctg ggcgaccggg actgggcgga ggaggtggcg caggagacct tcgtgcgggc
     4321 gctgaagcag gacgtcatcg ccagcgagcg gtcgtggctg ttcgccgtgg cgagcaacct
     4381 ggtgcgcgac gagacgcggc gcgacgcgcg gcggcggcag cggctggagc tgctgcacga
     4441 gcagtcgaag gcggacgcgg tggtggagcc ggagcc
//
LOCUS       DASSYW010000300         2085 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1422212, whole genome shotgun sequence.
ACCESSION   DASSYW010000300 DASSYW010000000
VERSION     DASSYW010000300.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2085)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2085)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2085
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1422212"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2052)
                     /locus_tag="VFN38_04710"
     CDS             complement(<1..2052)
                     /locus_tag="VFN38_04710"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HET9011090.1"
                     /translation="MTLGTPAYMAPEQIAGDANVDHRADIYSTGVLAYELLAGRLPFE
                     GETRQEMLSAHLHEAPAPVSTHRPDVPAALEELVMQCLEKQREDRWQSAGEMVERLEA
                     LSTDLARPTRAELARSRGRRRAGIAVGMLVVAALIVVALRRNTGAADAWRDRWARAHV
                     ERLTDFPGSEVDAAISPNGQLVAFLADRDSIFDAFAMQVGSDRVTNLTEGRFPEMFND
                     DVRNVGFTGDAEHVWLRRADLGSPVRVVLAPTGGGAARPFLDTAVTVAWSPDGKRIAY
                     HEATLGDPMHVADADGRHSRRIHVAAPGVHSHHPAWSPDGRFVYFTQGLPPDEMDVWR
                     IAFDGSGAAEQITHHRSRVAYPALLDDRTLVYSATADDGTGPFLYLMDLQERVAHRVS
                     TAVEQYLSIAAAAAVSGQPRRLVATVSNPAVQLWSVPIADSVTSERGVSRVELPTARG
                     AAPRFTSDASLLYLASRSGADGLWRLANGKASELWKPAQGAVVGAATASPDGGRVCFP
                     VRRELRTTLHCTSADGSGARAVAESLDVRGAASWSPDGRWLAVAARAGAGVKVFKVPV
                     DGGAPVRLVDSVSSNPVWSPDGTFILYSGTPRARSVPVKAVTPDGRPHALPALSVDRV
                     GDSYRFLPSGRGLVVKLGGFRRQDFWAFDLATGQRRRLTALKPGESLSRFDVSPDGKR
                     IL"
BASE COUNT          310 a          816 c          678 g          281 t
ORIGIN      
        1 caggatccgt ttcccgtccg gcgagacgtc gaaccgcgac agcgactcgc cgggcttgag
       61 cgccgtcagc cggcgccgct gccccgtcgc caggtcgaac gcccagaaat cctgccgccg
      121 gaatccgccg agcttcacca ccagcccgcg accgctcggc aggaatcggt agctgtcgcc
      181 cacccgatcc accgacagtg ccggaagcgc gtgcggcctg ccgtccggag tgaccgcctt
      241 caccggtacg ctccgcgcgc gcggcgtccc cgagtacagg atgaacgtgc cgtccggcga
      301 ccacaccgga ttggacgaca ccgaatccac taggcgtacc ggcgcgccgc catccaccgg
      361 caccttgaac accttcaccc ccgcgcccgc gcgcgcggcg accgccagcc accgcccatc
      421 gggcgaccac gacgcggcgc cgcgcacgtc cagcgactcg gccaccgctc gcgcaccgct
      481 cccgtcggct gacgtgcagt gaagcgtcgt gcgcaactcc cgacgcacgg gaaagcacac
      541 acgtccgcca tcgggcgacg ccgtcgccgc gccgacgacg gcgccctgcg ccggcttcca
      601 cagctcgctc gccttgccat tcgccaggcg ccacaacccg tcggcgccgc tgcgggacgc
      661 gagatacagc agcgatgcgt cggacgtgaa acgcggcgcg gcgccgcgcg cggtcggcag
      721 ctcgactcga ctcacccccc gctcgctcgt cacgctgtcg gcgatcggca cgctccacaa
      781 ctgcaccgcc gggttcgaca ccgtcgccac gagccgcctc ggctgtcctg acacggccgc
      841 cgccgccgcg atggagagat actgctccac cgccgtgctc acccgatgcg cgacgcgctc
      901 ctgcagatcc atcaggtaca gaaacggtcc cgtgccgtcg tcggccgtcg ccgagtagac
      961 gagcgtgcga tcgtcgagca gcgcggggta cgccacgcgc gaccggtgat gcgtgatctg
     1021 ctcggcggca ccgctgccat cgaatgcgat gcgccagacg tccatctcgt ccggcggcag
     1081 tccctgggtg aagtagacga agcggccatc gggcgaccag gcgggatgat gcgagtgcac
     1141 ccccggcgcg gcgacgtgga tgcgccgtga gtgtcggccg tcggcgtcgg cgacatgcat
     1201 cgggtcgccg agtgtggctt cgtgatatgc gatgcgcttg ccatccggcg accacgccac
     1261 cgtcaccgcg gtgtcgagga agggccgcgc cgcgccgccg ccggtcggcg caagcaccac
     1321 gcgcaccggc gacccgagat cggcgcgccg aagccagacg tgctcggcgt cgcccgtgaa
     1381 gccgacgttg cgcacgtcgt cgttgaacat ctcggggaag cgtccctcgg tcagattcgt
     1441 cacgcggtcg ctgcctacct gcatcgcgaa cgcatcgaag atgctgtcgc gatcggcgag
     1501 gaacgccacg agctgcccgt tcggcgagat cgccgcatcc acctccgagc ccggaaagtc
     1561 cgtcagtcgc tcgacgtgcg cgcgcgccca tcggtcgcgc cacgcgtcgg cggcgcccgt
     1621 gttgcgcctc agcgcgacga cgatgagcgc ggcgacgacc agcatgccga ccgcgatccc
     1681 ggctcgccgt ctcccgcgcg accgcgccag ctcggctcgc gtcggccggg ccaggtcggt
     1741 cgagagcgct tcgagacgct ccaccatctc accggcactc tgccatcgat cctccctctg
     1801 cttctcgagg cactgcatca ccagctcttc gagcgccgcc ggtacgtcgg ggcgatgcgt
     1861 cgacaccggg gccggcgcct cgtgcaggtg tgcggacagc atctcctgcc gcgtctcacc
     1921 ctcgaacggc agtcgtcccg ccagcagctc gtacgccagc acgccggtcg agtagatgtc
     1981 ggcgcggtga tcgacgttcg cgtcgccggc gatctgctcc ggcgccatgt acgccggcgt
     2041 gcctaacgtc acacccgcac ccgcggcgtg cgcgcccgtc gcggc
//
LOCUS       DASSYW010000301         2190 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_52427, whole genome shotgun sequence.
ACCESSION   DASSYW010000301 DASSYW010000000
VERSION     DASSYW010000301.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2190)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2190)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2190
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52427"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..852)
                     /locus_tag="VFN38_04715"
     CDS             complement(<1..852)
                     /locus_tag="VFN38_04715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011091.1"
                     /translation="MRRLLTLAILLACVPAAARAQSDITGEWAPLYHEDQVDRVPGLG
                     PVDFAGLPLTDGARQWALSWDASRVSVLEHQCQVHVLPYLLSGPTRLRITAQRDGNTE
                     RIVAFNHYMSLWGADRTVWVDGRPHPPAIAPHSWMGFSTGAWEGNTLVVKTTHIKQGW
                     VRRNGVPQSDLVTTTERFTRHGDMLTYVISIKDPVYLTEPLVRSRNFVRMTGLGEGNW
                     IAATPCEPAEETAAPPHAVPHYLPGTNPFVAEAEKRSGIPAEALTGGAETLYPEYRQR
                     LKELLKNP"
     gene            complement(837..1652)
                     /locus_tag="VFN38_04720"
     CDS             complement(837..1652)
                     /locus_tag="VFN38_04720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011092.1"
                     /translation="MLLAVIPVTVTAQRAQAPLDVTGYWVSVVSEDWHWRMVTPRKGD
                     VTSLPLNDEGRRVANAWDPAKEKPADACRPFGAAAIMRVPGRVHITWADDATLRIDTD
                     AGQQTRRLQFGKLATRGWRVNGRGEIEYFQQGTDAPPPPGPLTWQGYSAARWDLAPDP
                     KAVRNAVFFAGGLGTSPDGAGTIVPGKFGSLHVVTTQLRAGYLRANGIPYSEAARVTE
                     DYDFWTDDDGAEWFTVSTTVEDPKYLAAPFVTSTDFRKERDGSKWRPTPCAAY"
     gene            complement(1706..>2190)
                     /locus_tag="VFN38_04725"
     CDS             complement(1706..>2190)
                     /locus_tag="VFN38_04725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011093.1"
                     /translation="NTYSSAQRKIYFNDEPVVIIHAPAARTDGDSLVFFRRSDVISAG
                     DIFVTTSYPLIDPARGGSLGGIISGLNQLLDLMVPRYNQQGGTLVIPGHGRVGDQHDV
                     LEFRDMLVIVRDRVRDAAAKGQSLAQVKAARPTLDYDARWGAPDAFVDALYAEVAGRR
                     "
BASE COUNT          315 a          770 c          745 g          360 t
ORIGIN      
        1 ggggttcttc aacagctcct tcaggcgctg gcgatactcg ggatagagcg tctcggcccc
       61 gccggtgagc gcttcggccg ggatgccgct ccgcttttcg gcctcggcca cgaaggggtt
      121 cgtgccgggc aggtagtgcg gcaccgcgtg cgggggcgcg gcggtttcct ccgccggctc
      181 gcacggggtg gccgcgatcc agttgccctc gcccagcccc gtcatgcgga cgaagttgcg
      241 gctccgcacg agcggctcgg tcagatacac cgggtccttg atcgagatca cgtacgtcag
      301 catgtcgcca tgccgcgtga agcgctcggt ggtggtgacc aggtcgcttt gcggcacgcc
      361 gttacggcgc acccacccct gcttgatgtg cgtggtcttc accaccagag tgttcccctc
      421 ccacgcgccc gtcgagaagc ccatccagga gtgcggcgcg atcgccggcg ggtggggccg
      481 gccatcgacc cagaccgtcc ggtccgctcc ccacagactc atgtagtggt tgaaggcgac
      541 gatgcgctcg gtgttgccgt cgcgctgcgc cgtgatgcgc agccgcgtcg gtccgctcag
      601 gagatacggg agcacgtgca cctggcactg gtgctcgagc accgacacgc gcgaggcgtc
      661 ccagctgagc gcccactggc gggcgccgtc ggtgagcggc agccccgcga aatccaccgg
      721 accgagcccc ggcacgcgat cgacctggtc ctcgtgatag agcggcgccc actcacccgt
      781 gatgtccgac tgtgcgcggg cggcggccgg cacacacgcg agcaggatgg ccaaggtcag
      841 taggcggcgc acggcgtcgg cctccatttc gaaccatccc gttccttgcg gaagtcggtg
      901 ctggtgacga acggcgccgc caggtacttc ggatcctcca ccgtcgtgct caccgtgaac
      961 cactcggcgc catcgtcgtc cgtccagaag tcgtagtcct cggtcacgcg cgcggcttcg
     1021 ctgtaaggga tgccgttggc gcgcaggtat ccggcgcgca gctgcgtggt gaccacatgg
     1081 agcgatccga actttccggg gacgatcgtg ccggcgccgt ccgggctcgt gcccagaccg
     1141 ccggcaaaga acaccgcgtt ccgaaccgcc ttcggatccg gtgccagatc ccagcgtgcc
     1201 gccgaatagc cctgccaggt gaggggcccg ggtggcggcg gcgcgtcggt cccttgttgg
     1261 aaatattcga tttcgccgcg cccgttcacg cgccagccgc gcgtggccag cttgccgaac
     1321 tggaggcgcc gcgtctgctg gccggcgtcg gtgtcgatgc gcagcgtcgc gtcgtcggcc
     1381 cacgtgatgt gcacgcggcc gggcacgcgc atgatcgccg ccgcgccaaa cggcctgcac
     1441 gcgtcggccg gcttctcctt cgcggggtcc cacgcattgg ccacgcggcg gccttcgtcg
     1501 ttcagcggca ggctcgtgac gtcgcccttg cgcggcgtca ccatgcgcca gtgccagtct
     1561 tcgctgacca ccgacaccca gtagccggtg acgtcgagcg gcgcctgcgc acgttgcgcc
     1621 gtcaccgtca cagggatcac ggcgaggagc accaacactc gtagaggcgc acctttaggt
     1681 gcacctgtgg agcgcgatcg ccagctcaac gccgtcccgc cacttccgcg tagagggcat
     1741 cgacgaaggc gtccggcgcg ccccatcgcg cgtcgtagtc caacgtcggg cgcgcggcct
     1801 tcacctgcgc gagcgattgc cccttcgccg ccgcatcgcg cacgcggtcg cggacgatca
     1861 ccagcatgtc gcggaactcg agcacgtcgt gctgatcgcc cacgcggccg tgtcccggaa
     1921 tcaccagggt gccgccctgc tggttgtagc gcggcaccat caggtccagc agctggttca
     1981 agccgctgat gatgccgccc aggctgccgc cgcgcgccgg gtcgatcaag ggatatgagg
     2041 tcgtgacgaa gatgtcaccg gcgctgatca cgtccgagcg gcggaagaac accaggctgt
     2101 cgccgtcggt gcgggccgcc ggcgcgtgaa tgatcaccac cggttcgtcg ttgaaataga
     2161 tcttccgctg tgccgacgag taggtgttcg
//
LOCUS       DASSYW010000302         2929 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1692372, whole genome shotgun sequence.
ACCESSION   DASSYW010000302 DASSYW010000000
VERSION     DASSYW010000302.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2929)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2929)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2929
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1692372"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            516..2204
                     /gene="treS"
                     /locus_tag="VFN38_04730"
     CDS             516..2204
                     /gene="treS"
                     /locus_tag="VFN38_04730"
                     /EC_number="5.4.99.16"
                     /inference="COORDINATES: protein motif:HMM:TIGR02456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047471 - maltose
                     alpha-D-glucosyltransferase activity [Evidence IEA];
                     GO_process: GO:0005991 - trehalose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="maltose alpha-D-glucosyltransferase"
                     /protein_id="HET9011094.1"
                     /translation="MHDRSPDPSWHHDAVIYQLHVKAFRDSNRDGFGDFRGLIEKLDY
                     IAELGVTAVWLLPFYPSPLRDDGYDIADYCDVHPSYGTLDDFREFLDKAHARGLKVIT
                     ELVINHTSDQHPWFQRARQAPKGSPERDFYVWGDDPNRYKDARIIFTDTETSNWSWDP
                     VAQQFFWHRFFSHQPDLNFDNPEVLESILDVMRFWLDMGVDGLRLDAIPYLVEREGTS
                     CENLPETHVVLKKLRAALDSEYVGRVFLAEANQWPDDVRPYFGDGDECHMAFHFPVMP
                     RMYMAVAQEDRTPVVDILMRTPPIPPQCQWAIFLRNHDELTLEMVTDEERDYMYNAYA
                     KDRRMRINVGIRRRLAPLMENGRKEIELMNALLLSLPGSPILYYGDELGMGDNIYLGD
                     RNGVRTPMQWTADRNAGFSSVESAALYFPVIADAPYSYHTVNVEAQERTPGSLLHWQR
                     AIVRLRRRYHAFGRGSFEPLAPENRRVLAFLRRYGDEIILCVNNLARHAQYVELHLGE
                     FNGWSPMELWSGHAFPKIGELPYLLTLNGRDFMWFKLQPPGGPERIGPVGEESA"
     gene            2201..>2929
                     /locus_tag="VFN38_04735"
     CDS             2201..>2929
                     /locus_tag="VFN38_04735"
                     /inference="COORDINATES: protein motif:HMM:NF012356.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HET9011095.1"
                     /translation="MTATLTDPAMDPAGANGANGANGANGAAAERPVWTLERGATVTA
                     AGVSFSVWAPSAQRVSVVIATGPAAGEHPLERRAGERGLFAGTVAGAGPGDRYGYRVD
                     DGEPLPDPVSRSQPEGVHALSEVVDPADFQWRDRMWDGVALADFAIYELHIGTFTPEG
                     TFDAAAARLPELVALGVTAIEIMPVGEFPGRRNWGYDGVHIYAPHHAYGGPAGMKRLV
                     DAAHAHGLGVVLDVVYNHVGPEGNY"
BASE COUNT          451 a         1058 c         1012 g          408 t
ORIGIN      
        1 gtcgctgttc gatccgacgc cgtggaggaa tccgcggcac tggatgggga agtaggcgag
       61 ccgctttcct cggcgggggg cgcttaaggg ccgatgcggc ggggcggcgt acggcgagtc
      121 gtcaggcgtg acgcgagagg cgggcggcga ggaattcgga gtgggtatcg gtctggaacg
      181 gcgtgagagg gcggcacgcc cccgcactcc atccgccgtt cagaaccgat accctgttcc
      241 acttccggcg ccgcacgccg cacccctctc gccgaacgac tcgccgcacg ccgcgtcgcc
      301 gcatcggcac taacgcgccg catcgccgca tcggcagcaa gccgcgccgc cgcctcggcc
      361 ctgaacgccg tgccgtcggc ctgcttgttg cgccttgccc cccgcgtccg ccctccgcac
      421 gcgtcgtcgc ggcaaatcca ccaccatcga gccactcggg cctgtgaccg cgccacgata
      481 gcggcacccg acagcagaac cgacccaccg cgtacatgca cgaccgctcg cccgacccgt
      541 cctggcatca cgacgccgtc atctaccagc tccacgtcaa ggccttccgc gactccaacc
      601 gcgacggctt cggcgacttt cgcgggctga tcgagaagct cgactacatc gccgagctcg
      661 gcgtcaccgc ggtgtggctc ctcccgttct atccgtcgcc cctgcgcgac gacggctacg
      721 acatcgccga ctactgcgac gtccacccga gctacgggac gctcgacgac ttccgcgagt
      781 tcctcgacaa ggcccacgcg cgcgggctca aggtgatcac cgagctggtg atcaaccaca
      841 cctccgacca gcacccctgg ttccagcgcg cgcggcaggc gccgaagggg tcgcccgagc
      901 gcgacttcta cgtgtggggc gacgacccga accggtacaa ggacgcccgc atcatcttca
      961 ccgacaccga gacgtcgaac tggagctggg acccggtggc ccagcagttc ttctggcacc
     1021 gcttcttcag ccaccagccc gacctcaact tcgacaaccc cgaggtgctc gagtccatcc
     1081 tggacgtgat gcgcttctgg ctggacatgg gggtggacgg gctgcggctc gacgcgatcc
     1141 cctacctggt ggagcgcgag gggacgagct gcgagaacct ccccgagacc cacgtcgtgc
     1201 tgaagaagct gcgggccgcg ctggattcgg agtacgtggg gcgcgtcttc ctggccgagg
     1261 cgaaccagtg gcccgacgac gtgcggccgt acttcggcga cggggacgaa tgccacatgg
     1321 cgttccactt ccccgtgatg ccgcgcatgt acatggcggt ggcgcaggag gaccgcaccc
     1381 ccgtcgtgga catcctgatg cggacgcccc ccatcccgcc gcagtgccag tgggcgatct
     1441 tcctgcgcaa ccacgacgag ctcacgctgg agatggtgac cgacgaggag cgcgactaca
     1501 tgtacaacgc ctacgccaag gaccggcgca tgcggatcaa cgtcggcatc cggcggcgtc
     1561 tcgcgccgct gatggagaac ggacgcaagg agatcgagct gatgaacgcg ctcctcctct
     1621 ccctccccgg ctcgcccatc ctgtactacg gcgacgagct ggggatgggc gacaacatct
     1681 acctcggcga ccggaacggg gtgcgcacgc cgatgcagtg gaccgccgac cgcaacgccg
     1741 gcttctccag cgtggagagc gccgcgctgt acttccccgt catcgccgac gcgccgtaca
     1801 gctaccacac ggtgaacgtc gaggcccagg agcggacccc gggctcgctc ctgcactggc
     1861 agcgggccat cgtccggctg cgccggcggt accacgcctt cgggcgcggg agcttcgagc
     1921 cgctggcgcc ggagaaccgg cgggtgctcg ccttcctgcg ccggtacggc gacgagatca
     1981 tcctgtgcgt gaacaacctg gcccggcacg cgcagtacgt ggagctgcac ctcggggagt
     2041 tcaacggctg gtcgccgatg gagctgtgga gcggccacgc ctttccgaag atcggcgagc
     2101 tcccctacct gctcaccctg aacgggcgcg acttcatgtg gttcaagctg cagccgcccg
     2161 gcggcccgga gcggatcggg ccggtggggg aggagagcgc gtgacggcca ccctcaccga
     2221 tccggcgatg gaccccgccg gcgcgaacgg cgcgaacggc gcgaatggcg cgaacggcgc
     2281 ggccgcggag cgtccggtct ggacgctcga gcgcggcgcg acggtcaccg cggccggcgt
     2341 gtcgttcagc gtgtgggccc cctccgcgca gcgggtgtcg gtggtgatcg ccaccgggcc
     2401 ggcggcgggc gagcatccgc tggagcggcg cgcgggagag cgcgggctgt tcgccggcac
     2461 cgtggccggc gccggccccg gcgaccggta cggctaccgc gtggacgacg gcgagcccct
     2521 ccccgacccg gtgagccgct cgcagccgga gggggtgcac gccctgtccg aggtggtgga
     2581 cccggccgat ttccagtggc gcgaccgcat gtgggacgga gtcgccctcg ccgacttcgc
     2641 catctacgag ctgcacatcg gcaccttcac gccggagggc accttcgacg cggccgcggc
     2701 gcgcctcccc gagctcgtgg cgctgggggt caccgccatc gagatcatgc cggtggggga
     2761 gtttcccggg cggcggaact ggggctacga cggggtgcac atctacgcgc cgcaccacgc
     2821 ctacggcggg ccggcgggga tgaagcgcct ggtggacgcc gcgcacgcgc acggcctggg
     2881 cgtggtgctc gacgtcgtgt acaaccacgt ggggccggag gggaactac
//
LOCUS       DASSYW010000303         2243 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_114276, whole genome shotgun sequence.
ACCESSION   DASSYW010000303 DASSYW010000000
VERSION     DASSYW010000303.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2243)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2243)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2243
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_114276"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..864
                     /locus_tag="VFN38_04740"
     CDS             <1..864
                     /locus_tag="VFN38_04740"
                     /inference="COORDINATES: protein motif:HMM:NF044772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HET9011096.1"
                     /translation="KAVSFVEANWRPPTEAQIPNDSLGASIRRGLYLLRFTPESLPAY
                     STSSLRCTSCHQNDGTKASAAPLTGAHARYPKYMPRSGAVIGLADRVNYCFTRSLAGN
                     LLPTDSRQMNDILAYLAFISHDVPVGTKIAGTDGLMSMKDTLVGDLTRGEAVFKRECV
                     VCHQADGRGTGPIPALWGPRSFSIGASMAREERAASFIWHNMPQSKPGTLTPQEAFDV
                     ASFVNSHPRPDSPGKETDWPIGGAPKDVPYATFAHAPHRPPPSLFIRRDPERAIVPKP
                     PVIDGGGKWED"
     gene            868..2199
                     /gene="soxC"
                     /locus_tag="VFN38_04745"
     CDS             868..2199
                     /gene="soxC"
                     /locus_tag="VFN38_04745"
                     /EC_number="1.8.2.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR04555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0030151 - molybdenum ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite dehydrogenase"
                     /protein_id="HET9011097.1"
                     /translation="MSRAHRDQDPAIEPETPDSLPDESAGLTRRGLLAGAAGVMGGVV
                     GGALLGALPTIVRGQGTPAVPAPRPTAPADPTKVTGAPTRAVGSRSPFETPARTPVGE
                     TFGNSLTPLQNLTGTVTPSDLHFERHHAGVPTIDPARHTLMLHGLVDRPTDFSLDDIR
                     RFPQVTRTHFIECSGNGRGAYREPKPDLTPQKVSGLTANTEWTGVPLATLFREVGVRR
                     EATWFLAEGGDACRMTRSVPVAKALDDALIVWAQNGEPLRPEQGYPLRLILPGWEGNI
                     NVKWLRRIELGLRPWMTRWETSKYTDPLPNGTARMFSMELDAKSIITSPAHPDVLAAR
                     GWRPITGLAWSGRGCVTKVEVSTDGGASWHQADLLGPSLPKAHVRFQYMWNWTGGEAR
                     LLSRATDDTGYVQPTYRKLVEVRGIGTDFHFNPIVGWRVQPDGRVAFLGET"
BASE COUNT          361 a          820 c          745 g          317 t
ORIGIN      
        1 aaggcggtct cgttcgtcga ggcgaattgg cggccgccca ccgaagccca gatcccgaac
       61 gactcgctgg gcgcgtcgat ccgccgcggc ctgtacctgc tccgcttcac gccggaaagc
      121 ctccccgcgt actccacgtc cagcctccgc tgcacgagct gccatcagaa cgacggcacc
      181 aaggcgagcg cggcgccgct caccggcgcc cacgcgcgct accccaagta catgccccgc
      241 tcgggcgcgg tcatcggact cgccgaccgc gtgaactact gcttcacccg gtcgctcgct
      301 ggcaacctgc tgcccaccga cagccgccag atgaacgaca tcctcgcgta tctcgcgttc
      361 atctcgcacg acgtccccgt cgggacgaag atcgccggca ccgacgggtt gatgagcatg
      421 aaggacacgc tcgtcggaga cctgacgcgc ggcgaagccg tcttcaagcg cgaatgcgtc
      481 gtgtgccatc aggcggacgg acgggggacc ggcccgatcc cggcgctgtg gggaccgagg
      541 tcgttctcca ttggcgcgtc gatggcccgc gaggaacggg cggccagctt catctggcac
      601 aacatgccgc agtcgaagcc cggcacgctc acgccgcagg aggcgttcga cgtggcctcc
      661 ttcgtcaact cgcacccgcg tccggactcg cccggcaagg agaccgactg gccaatcggc
      721 ggcgcgccga aggacgttcc ctatgccacg ttcgcccacg cgccgcatcg ccctccgccc
      781 tcgctcttca tccgccgcga tcccgagcgc gccatcgtcc cgaaaccgcc ggtgatcgat
      841 ggcggcggaa agtgggagga ctgacacgtg tcgcgggccc atcgggacca ggacccggcc
      901 atcgagccgg aaacgccgga cagcctgcct gacgagtcgg cgggcctaac gcggcgcggc
      961 ctgctcgctg gcgccgccgg cgtgatgggc ggcgtggtcg gtggcgcgct gctcggtgcg
     1021 cttccgacga tcgtccgtgg ccagggaacg cccgcagttc ccgccccgcg tcccacggcg
     1081 ccggccgacc ccaccaaggt gaccggggcg ccgacgcgcg ccgtggggtc gcgctcgcca
     1141 ttcgagacgc cggcgcgcac accggtcggg gagacgttcg ggaattccct cacgccgctc
     1201 cagaatctca ccggaacggt gacgccctcg gacctgcatt tcgagcgaca tcacgccgga
     1261 gttccgacca tcgaccccgc gcgtcacacg ctcatgctgc acgggctcgt cgatcgtccg
     1321 accgacttct cgctcgacga cattcgccgc ttcccgcagg tgacgcggac gcacttcatc
     1381 gagtgctcgg gcaacggacg cggcgcctat cgcgagccga agccggacct gacaccgcag
     1441 aaggtgtccg ggctcacggc gaacaccgag tggaccggcg tcccgctggc gacgctgttc
     1501 cgcgaggtcg gcgttaggcg cgaggccacg tggttccttg ccgagggagg cgacgcctgc
     1561 cggatgacgc ggtcggtgcc ggtggccaag gcgctggacg acgcgctcat cgtctgggcg
     1621 cagaacggcg agccgctgcg ccccgagcag ggctacccgc ttcgcctcat ccttccgggc
     1681 tgggaaggca acatcaacgt caaatggctg cgccgcatcg agcttgggct acggccgtgg
     1741 atgacgcgat gggagacgtc gaagtacacc gacccgctgc ctaacggcac ggcgcggatg
     1801 ttcagcatgg agctcgatgc gaagtcgatc atcacgtcgc ccgcgcaccc cgacgtgctc
     1861 gcggccaggg gatggcggcc gatcaccggg ctcgcctgga gcggccgcgg ctgcgtgacg
     1921 aaggtcgaag tcagcacgga cggcggagcg tcgtggcacc aggccgacct gctcgggccg
     1981 tcgctgccca aagcccatgt gcggttccag tacatgtgga actggaccgg cggcgaagcg
     2041 cgtctcctga gccgcgccac cgacgacacc ggctacgtcc aaccgaccta ccgcaagctc
     2101 gtcgaagtcc gcggcatcgg taccgacttc cacttcaacc caatcgtcgg ctggcgggtg
     2161 cagccggacg gccgcgtcgc cttcctcgga gagacctgat gcgacggttg tcattccgag
     2221 ccgcaggcga ggaatcgccg tcg
//
LOCUS       DASSYW010000304         2692 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1010186, whole genome shotgun sequence.
ACCESSION   DASSYW010000304 DASSYW010000000
VERSION     DASSYW010000304.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2692)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2692)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2692
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1010186"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1155
                     /locus_tag="VFN38_04750"
     CDS             <1..1155
                     /locus_tag="VFN38_04750"
                     /inference="COORDINATES: protein motif:HMM:NF014910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /protein_id="HET9011098.1"
                     /translation="IDIPNRLVTVEPGVTNLEITRQVAPFGYYYAPDPSSQQVCSIGG
                     NVAENSGGAHCLKYGFTVHHVVEVEAVLPDGSLTRIGSRLADEPGPDVLGLLVGSEGT
                     LAVVTKIVVRILRRPETVQTLLAAYDTISAAGTAVSEIIAAGIIPAAVEMMDALAIKA
                     AEAAVHPNFPPSDTILIVELDGPVPEVRELFATVEAICRRTGATTVEVAADEAHRLRI
                     WKGRKAAFAAMGRVSPNYYVQDGVVPRTKLPEVLGRIKALSERSGLGIGNVFHAGDGN
                     LHPLICYDESVPGQAELAEKVAGEILNYCVEAGGSITGEHGVGADKKNYMPRMFSEDD
                     LDAFQQVRDAFDPQRICNPGKVLPTPRLCGEVPGPYREHPVERAGLAERF"
     gene            1209..2372
                     /locus_tag="VFN38_04755"
     CDS             1209..2372
                     /locus_tag="VFN38_04755"
                     /inference="COORDINATES: protein motif:HMM:NF013714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HET9011099.1"
                     /translation="MTPRLVSEPTTGEGCAAALAAASAGRLSTVIRGGGTKTGWGRPV
                     DAVDLVLSTKSLVNTLVHRDGDLTVTVGSGVALGRLNTTLSARGQWLPVDSAFIGTTI
                     GGALATNDSGPLRHRFGTPRDLLIGITLALTDGRVVKSGGTVVKNVAGYDLGKLVTGS
                     YGGLAVIVDATFKLLPLPHASATLRAVYSDPELLAADAAAIGAGQLEPLAVDVRAAET
                     ADGPRWMLLVRFASSPASVTAQLDAARALVHGETTALREGQETRAWAEQVGLPWDEGA
                     AVVRCSWLPARLNHVLAMVRALRAECSVTLAGRVATGSGLLRLSGSDTAVAAAIAQAR
                     LETSPVGHVVVLRGSRALRGQVDVWGVAPSAPAAALKRALDPTGILNAGRGPL"
     gene            2372..>2692
                     /locus_tag="VFN38_04760"
     CDS             2372..>2692
                     /locus_tag="VFN38_04760"
                     /inference="COORDINATES: protein motif:HMM:NF024581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HET9011100.1"
                     /translation="MNVEKTGGVLSGPDAPPTALIDTCVHCGFCLPTCPTYLLWGEEM
                     DSPRGRIYLMKAGVEGRAEMTPAFVTHFDNCLGCLACVSACPSGVQYGPLIERTRAKI
                     EQQYP"
BASE COUNT          387 a          917 c         1005 g          383 t
ORIGIN      
        1 atcgacatcc cgaaccggct cgtcacggtg gaaccgggcg tgacgaatct cgagatcacg
       61 cgccaggtgg cgccgttcgg ctactactac gcgccggacc cctccagcca gcaggtgtgc
      121 tcgattggcg gcaacgtggc cgagaactcg ggcggcgcgc actgcctgaa atacggcttc
      181 acggtgcacc acgtggtgga agtggaagcc gtgctgccgg acggcagcct cacgcgcatc
      241 ggcagccgtc tcgccgacga gccgggcccc gacgtgctgg gactgctcgt ggggagcgag
      301 ggcacgctgg ccgtcgtcac gaagatcgtc gtgcggatcc tgcggcggcc cgagacggtg
      361 cagacgctgc tcgccgccta cgacaccatc agcgccgcgg gcacggcggt gtccgagatc
      421 atcgcggcgg gcatcatccc cgccgccgtc gagatgatgg acgcgctcgc gatcaaggcg
      481 gccgaagcgg cggtgcatcc caacttcccg ccgtccgaca ccatcctcat cgtcgagctc
      541 gacggccccg tgccggaagt gcgcgagctc ttcgcgacgg tcgaggcgat ctgccgccgc
      601 accggcgcga cgacggtgga agtggcggcc gacgaggcgc accggctgcg catctggaaa
      661 gggcgcaagg cggcctttgc ggcgatgggg cgcgtgtcgc ccaactacta cgtgcaggac
      721 ggcgtggtgc cgcgcacgaa gcttcccgag gtgctcgggc gaatcaaggc gctgtcggag
      781 cgcagcggcc tcggcatcgg caacgtcttc cacgccggcg acggcaacct gcatccgctg
      841 atctgctacg acgagtcggt gccggggcag gcggagctgg ccgagaaagt ggcgggcgag
      901 atcctgaact actgcgtgga ggcgggcggc tcgatcacgg gcgagcacgg cgtgggcgcg
      961 gacaagaaga actacatgcc gcgcatgttc tccgaggacg acctcgacgc gttccagcag
     1021 gtgcgcgacg ccttcgatcc ccagcggatc tgcaacccgg gcaaggtgct gcccacgccg
     1081 cggctgtgcg gcgaggtgcc gggcccctac cgcgaacacc cggtcgaacg cgccgggctg
     1141 gccgaacggt tctgatgacg gctgtcgcgc attcgagaga gggcacgcgc ggggaagcga
     1201 tcgacggcgt gacgccacgt ctcgtctcgg agccgacgac gggcgaaggg tgcgcggcgg
     1261 cgctggccgc ggcgtcggct ggccgtttgt ccactgtgat tcgcggcggc ggcacgaaaa
     1321 ccggctgggg ccggccggtg gacgcggtcg atctcgtgct gtccacgaag tcgctggtca
     1381 acacgctcgt gcaccgggac ggcgacctca ccgtgacggt cggatcgggc gtcgcgctcg
     1441 gccggctcaa tacgacgctg tcggcgcgcg ggcagtggct gccggtggac tcggcgttca
     1501 tcggcaccac gatcggcggc gcgctcgcga ccaacgacag cggcccgctg cggcaccgct
     1561 tcggcacgcc gcgcgatctg ctgatcggca tcacgctggc gctcaccgac ggccgcgtcg
     1621 tgaagtcggg tggcaccgtc gtgaagaacg tcgccggtta cgacctcggg aagctcgtca
     1681 ccggttcgta cggcgggctg gcggtcatcg tcgacgccac gttcaagctg ctgccgctgc
     1741 cacacgcctc cgcaaccctg cgcgccgtct acagcgatcc cgagttgctg gccgccgacg
     1801 cggccgccat cggcgcgggg cagctcgaac cgctcgccgt cgacgtgcgc gcggcggaaa
     1861 cggccgacgg cccgcgctgg atgctgctgg tgcggtttgc gtcgagcccg gcgtccgtga
     1921 cggcgcagct cgacgctgca cgcgcgctcg tgcacgggga gacgacggcg ctgcgcgaag
     1981 ggcaggaaac gcgggcgtgg gccgagcagg tggggctgcc gtgggatgag ggggcggccg
     2041 tggtgcgctg cagctggctt ccggcgcgct tgaaccacgt gctcgccatg gtgcgcgcgc
     2101 tgcgggccga gtgcagcgtg acgctcgccg gccgcgtggc gacgggcagc ggcctgttgc
     2161 gcctctccgg ctccgacacc gccgtggcgg cggcgattgc gcaggcgcgt ctcgagacgt
     2221 cgcctgtcgg gcacgtcgtg gtgctgcgcg gcagccgggc gctgcgcggt caggtggacg
     2281 tgtggggcgt ggccccgtcc gcgccggccg ccgccctcaa gcgtgcgctc gatcccaccg
     2341 gcatcctcaa cgccggccga gggcctctgt gatgaatgtg gagaagaccg gcggcgtgct
     2401 gtcgggaccg gatgcgccgc cgaccgcgct catcgacacc tgcgtccact gcggcttctg
     2461 cctgccgacg tgccccacct atctgctgtg gggtgaggag atggactcgc cgcgcgggcg
     2521 catctacctg atgaaagccg gggtcgaagg ccgcgccgag atgacgccgg cgttcgtcac
     2581 gcatttcgac aactgcctgg gatgcctggc gtgcgtgtcg gcgtgcccgt ccggcgtgca
     2641 gtacggaccg ctgatcgagc ggacgcgcgc caagatcgag cagcaatacc cg
//
LOCUS       DASSYW010000305         4352 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_795975, whole genome shotgun sequence.
ACCESSION   DASSYW010000305 DASSYW010000000
VERSION     DASSYW010000305.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4352)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4352)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4352
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_795975"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1071
                     /locus_tag="VFN38_04765"
     CDS             <1..1071
                     /locus_tag="VFN38_04765"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF045194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HET9011101.1"
                     /translation="LAGGAEIHLHEIFGRLAARGHEITLLCGGWPGCPPTARLDGIEV
                     RRVGTRYTFPFLAHRAFRRQLAGRPFDLLIEDVNKIPLATTRWGGPPVVALVPHLFGG
                     TAFQELAAPLAAAVWLAERPLGRVYRGVPFQAISVSTAEDLAARGIPRDSVTVIYPGI
                     DTAGYTPRPEVRAAEPVFAYLGRLKRYKGVHHVVRAFAALGHPTATLEIAGAGDYRPA
                     LERLAASLDLGERVRFLGRISETEKLDLLRRAWGLVFASPKEGWGITNLEAAACGTPV
                     VASNSPGIRESVCDGETGYLVPHGDTRAMADAMGRLASDRALVESLGVQARRFAETFT
                     WERAAEETERHLHTVLTSSQAR"
     gene            1068..2048
                     /gene="hprK"
                     /locus_tag="VFN38_04770"
     CDS             1068..2048
                     /gene="hprK"
                     /locus_tag="VFN38_04770"
                     /inference="COORDINATES: protein motif:HMM:TIGR00679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HPr(Ser) kinase/phosphatase"
                     /protein_id="HET9011102.1"
                     /translation="MTPSLRVGALLDQLGALLELERVPGTEGLERLVPGADVSSPGLA
                     LAGFVARFAADRLQVFGETEVTYLHSLDSATRRAHLAQFFAFPVPCVFVTKGLDLPCE
                     VPEEAMRAGVAVLRSRLKTNEFYNRIKPWLEDFFAPQTTLHGSLADVYGVGLLFIGQS
                     GIGKSECVLDLVERGHRIVADDLVLVRRKGADILIGRGHELQRHYMEIRGVGLVDIPA
                     IFGIRAVRQQKRIEVVVQLEEWRQDATTDEVERTGLDGETTDILGVHLPRITVPLNPG
                     KNITVIAEVIAMHHLLKWSGIDPAERFNARLIKQMRDKSEINRYLLDDHE"
     gene            2035..2457
                     /locus_tag="VFN38_04775"
     CDS             2035..2457
                     /locus_tag="VFN38_04775"
                     /inference="COORDINATES: protein motif:HMM:NF015567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011103.1"
                     /translation="MTMSDAPADAGGGTVKRALVAGHADFAAGLVSAVEVITGRGDVL
                     VPIEVKGLCGDDILQLLRDTMTASGVRVIFTDLQAGSCTMAARRVLRELGEGTLVAGA
                     NLPMLLDFALSSDPDVAAAATRAAERGRAAVSVHGGTP"
     gene            2454..2942
                     /locus_tag="VFN38_04780"
     CDS             2454..2942
                     /locus_tag="VFN38_04780"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF015769.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HET9011104.1"
                     /translation="MTIVLNRIDDRLIHGQVVVGWGQPLDVKFIVLVDDAVAASDWEQ
                     ELYRMGVPPEMEVRFHSAADAAPLLDGYRTEHRPGILLTGDIATMRELVERGGVREVN
                     VGGIHHRAGRTQHLRYVFLTADEQQALRGLAERGAVVTAQDVPAARAIPLEELLASRE
                     GT"
     gene            2939..3616
                     /locus_tag="VFN38_04785"
     CDS             2939..3616
                     /locus_tag="VFN38_04785"
                     /inference="COORDINATES: protein motif:HMM:NF015566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HET9011105.1"
                     /translation="MRELLPISLLGGLLGLDVVCFPQMMISRPLVAATLAGAFLGDAT
                     TGVLVGATLELIALATLPFGASRYPEWGSSAVVGAAIATAVNTDRAGALTVGVLCALA
                     TAWISGWTLVKLRQWNAWLARRKRPGLDAGWRGTVIGLQLAGLTSDFVRAALLTAVAY
                     GLGFPVAHATVGVWSFGDHGSRAVVVTIASAVAASAAWTIFHTAARARWYFAAGLAIG
                     LLLVFVR"
     gene            3613..>4352
                     /locus_tag="VFN38_04790"
     CDS             3613..>4352
                     /locus_tag="VFN38_04790"
                     /inference="COORDINATES: protein motif:HMM:NF015570.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS system mannose/fructose/sorbose family
                     transporter subunit IID"
                     /protein_id="HET9011106.1"
                     /translation="MSAIASPRPMPGPVAVPRVPPWTWVTVFSRLLAIQGSWNYETLI
                     GNGIGFCVEPLLRALPGGIHGAAFKAAMARQSTYFNAHPYLAAVAVGALARAELTGVP
                     PERIERFRTALCGPLGSVGDQLVWAGWLPFCSLLSLITFGLGARPLAVVLGFLVLYNA
                     GHLALRIWGLRVGWTRGLGVASALANPVLRRGPARLARAGATAAGVAIPPTAAHVVRG
                     GSTLLALVLVAAAACAALLVRLHGRVEG"
BASE COUNT          520 a         1605 c         1586 g          641 t
ORIGIN      
        1 ctcgccggtg gcgccgagat ccacctgcac gagatcttcg gacggctcgc cgcgcgaggc
       61 cacgagatca ccctgctgtg cggcggctgg cccggctgcc ctcccacggc ccggctggac
      121 gggatcgagg tgcggcgcgt cggcacccgc tacacctttc ccttcctcgc gcaccgcgcc
      181 ttccggcgcc agctcgccgg ccggccgttc gacctcctga tcgaggacgt caacaagatc
      241 ccgctcgcga cgacgcggtg gggggggccc ccggtcgtgg ccctcgtgcc gcatctgttc
      301 ggggggacgg cgttccagga gcttgccgcc ccgctggccg ccgcggtgtg gctggccgag
      361 cggccgctcg gccgcgtcta ccggggcgtc cccttccagg cgatcagcgt gagcacggcg
      421 gaggacctcg ccgcgcgcgg cattccgcgc gactcggtga ccgtcatcta cccgggcatc
      481 gatacggcag gttacactcc gcgtccggaa gtgcgggcgg cggagccggt gttcgcctat
      541 ctcgggcggc tcaagcgcta caagggggtg caccacgtgg tgcgcgcctt cgccgcgctc
      601 gggcacccca cagcgaccct cgagatcgcc ggcgccggcg attatcgccc cgccctcgag
      661 cgcctcgccg cgtcgcttga cctcggcgag cgcgtgcggt ttcttgggcg tatcagcgag
      721 acggagaagc tcgacctgct gcgtcgtgcg tgggggctcg tgttcgcctc gcccaaggag
      781 gggtggggca tcaccaatct ggaagcggcg gcgtgcggga ccccggtggt cgcgtcgaac
      841 tccccgggca tccgggagtc ggtgtgcgac ggcgagacgg gctatctggt gccgcacggc
      901 gacacgcggg cgatggccga cgcgatgggc cggctcgcgt cggaccgcgc gctcgtggag
      961 tccctgggcg tgcaggcgcg ccgcttcgcc gagacgttca cctgggagcg cgccgccgag
     1021 gagacggagc gccacctgca caccgtgctc acctccagcc aggcccgatg actccctccc
     1081 tgcgcgtggg cgcgctgctc gaccagctcg gcgcgctgct cgagctcgag cgggtgcctg
     1141 gcactgaagg gctcgagcgc ctcgtcccgg gcgccgacgt gtcgagcccc ggcctcgcgc
     1201 tcgcgggctt cgtggcgcgc ttcgccgccg atcggctcca ggtcttcggc gagacggagg
     1261 tgacctacct ccactcgctc gacagcgcga cgcgccgcgc gcacctcgcg cagttcttcg
     1321 ccttccccgt gccgtgcgtg ttcgtcacca aggggctcga cctgccgtgc gaggtgcccg
     1381 aggaggcgat gcgcgccggc gtcgcggtgc tgcgctcgcg gctgaagacc aacgagttct
     1441 acaaccgcat caagccgtgg ctcgaggact tcttcgcgcc gcagacgacg ctccacggct
     1501 cgcttgccga cgtctacggc gtgggactcc tgttcatcgg ccagagcggg atcgggaagt
     1561 cggagtgcgt gctcgacctc gtggagcggg gccaccggat cgtcgcggac gacctcgtgc
     1621 tcgtccgccg gaagggcgcc gacatcctga tcgggcgcgg gcacgagctg cagcgccact
     1681 acatggagat ccgcggcgtc ggcctggtgg acatccccgc catcttcggc atccgcgcgg
     1741 tgcgccagca gaagcgcatc gaggtcgtgg tgcagctgga ggagtggcgg caggacgcca
     1801 cgaccgacga ggtggagcgc acggggctcg acggcgagac caccgacatc ctcggcgtgc
     1861 acctgccgcg gatcacggtg cccctcaatc cgggcaagaa catcaccgtg atcgccgagg
     1921 tgatcgcgat gcaccatctg ctgaagtgga gcggcatcga ccccgccgag cggttcaacg
     1981 cccggctgat caagcagatg cgcgacaagt ccgagatcaa ccgatacctg ctggatgacc
     2041 atgagtgacg cgccggcgga cgcgggcggc ggaacggtga agcgcgcgct cgtcgccggt
     2101 cacgcggact tcgccgccgg tctcgtctcg gcggtggagg tcatcacggg gcgcggcgac
     2161 gtgctggtgc cgatcgaggt gaaggggctg tgcggggacg acatcctgca gctgctgcgc
     2221 gacacgatga ccgccagcgg cgtgcgcgtc atcttcaccg acctccaggc cggaagctgc
     2281 accatggcgg cgcggcgcgt gctgcgcgag ctgggcgagg gcaccctcgt cgccggcgcg
     2341 aacctgccga tgctgctcga cttcgccctg tcgtcggacc ccgacgtcgc cgcggcggcc
     2401 acgcgggccg cggagcgcgg ccgcgccgcg gtcagcgtgc acggaggcac gccgtgacga
     2461 tcgtcctcaa tcgcatcgac gaccggctca tccacggaca ggtcgtcgtg gggtggggcc
     2521 agccgctcga cgtgaagttc atcgtgctcg tggacgacgc cgtcgcggcg agcgactggg
     2581 agcaggagct ctaccggatg ggggtcccgc cggagatgga ggtgcgcttc cattccgcgg
     2641 ccgacgcggc cccactgctc gacggctatc gcacggagca ccggccgggc atcctcctca
     2701 ccggcgacat cgccacgatg cgcgagctgg tcgagcgggg cggggtgcgc gaggtgaacg
     2761 tcggcggcat ccaccaccgg gccggccgca cgcagcacct ccggtacgtg ttcctcaccg
     2821 ccgacgagca gcaggcgctg cgcggcctcg ccgagcgggg cgcggtggtg acggcgcagg
     2881 acgtgccggc cgcgcgggcg atcccgctgg aagagctgct cgcgtcgcgc gagggcacat
     2941 gagagagctg ctgccgatct cgctcctggg cggcctgctc gggctcgacg tcgtctgctt
     3001 cccgcagatg atgatctcgc ggccgctggt cgccgccacc ctcgccggcg ccttcctggg
     3061 cgacgccacc accggcgtgc tcgtgggcgc gacgctcgag ctgatcgccc tcgcgaccct
     3121 ccccttcgga gcctcgcgct atcccgaatg gggctcgtcc gcggtggtcg gcgccgcgat
     3181 cgccacggcc gtgaacaccg accgcgcggg cgccctcacc gtgggggtgc tgtgcgcgct
     3241 ggcgacggcg tggatcagcg gctggaccct ggtgaagctg cgccagtgga acgcctggct
     3301 ggcgcggcgg aagcggcccg gcctcgacgc cggctggcgc ggcaccgtga tcggcctcca
     3361 gctggccggc ctcacgagcg acttcgtgcg cgccgccctc ctcaccgcgg tcgcctacgg
     3421 cctcggcttc ccggtggccc acgccaccgt cggcgtctgg tcgttcggcg accacggctc
     3481 gcgcgcggtc gtggtgacga tcgccagcgc cgtggccgcc agcgccgcgt ggacgatctt
     3541 ccacacggcg gcgcgcgcgc gctggtactt cgccgccggc ctggcgatcg ggctcctgct
     3601 cgtgttcgtg cgatgagcgc catcgcctcg ccgcgcccga tgccggggcc cgtcgccgtc
     3661 ccccgcgtgc cgccgtggac gtgggtgacc gtgttctcgc ggctgctcgc gatccagggg
     3721 tcgtggaact acgagacgct gatcggcaac ggcatcggct tctgcgtcga acccctgctg
     3781 cgcgccctgc cgggcggcat ccacggcgct gcgttcaagg cggcgatggc gcgccagagc
     3841 acctacttca acgcccatcc gtacctcgcc gcggtggcgg tgggcgccct ggccagggcg
     3901 gagctcaccg gggtgccccc cgagcgcatc gagcggttcc gcaccgcgct gtgcggcccg
     3961 ctcggcagcg tcggtgacca gctcgtctgg gccggctggc tccccttctg ctccctcctc
     4021 tcgctcatca ccttcggact gggcgcgcgg ccgctcgccg tcgtcctggg cttcctggtg
     4081 ctctacaacg cggggcacct cgcgctccgg atctgggggc tgcgggtggg ctggacgcgg
     4141 ggactcgggg tggcgtcggc gctcgcgaac cccgtcctcc gccgtggccc cgcgcgcctc
     4201 gcgcgcgccg gcgcgacggc ggcgggagtc gccattccgc ccaccgccgc gcacgtcgtg
     4261 cggggcgggt ccaccctgct cgccctcgtg ctcgtcgccg cggccgcctg cgccgcgctc
     4321 ctcgtccgcc tgcacggccg cgtggaaggg tg
//
LOCUS       DASSYW010000306         6695 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1164277, whole genome shotgun sequence.
ACCESSION   DASSYW010000306 DASSYW010000000
VERSION     DASSYW010000306.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 6695)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6695)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6695
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1164277"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..406)
                     /locus_tag="VFN38_04795"
     CDS             complement(<1..406)
                     /locus_tag="VFN38_04795"
                     /inference="COORDINATES: protein motif:HMM:NF019499.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vitamin K epoxide reductase family protein"
                     /protein_id="HET9011107.1"
                     /translation="MNKRMLAALVALAGLFVSLYLTLYKLGYIGTLVCAVGSCEVVQT
                     SKWASLLGYPVAAWGVAYYAAVLAVSLAGLSPSLVDDRRLSRLLVAMTGSGLLFTLWL
                     KYLEFFVINAVCIWCVVSAVLVAALFVIALLDL"
     gene            complement(406..1119)
                     /locus_tag="VFN38_04800"
     CDS             complement(406..1119)
                     /locus_tag="VFN38_04800"
                     /inference="COORDINATES: protein motif:HMM:NF024853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HET9011108.1"
                     /translation="MTAAKRGGPGRAFWIALGVLVLVGIAVLSWLASRPKTQVTRLDP
                     NLPAMKAEGYLLGSPSAPVEVIEFADFECPACAQYATITEPDVRTRLVNTGQVRVRYI
                     DYPLPMHKNTWDASLAAACANDQGKFWEMHDALFANQDRWNGEATRRPRGPIGDLAKS
                     VGLDMEKYGACMDADTHRAKIQSHLAEAEKRQIQSTPTFVFNGLVVPSALPYDTFKKY
                     VDQALKTAPARADSAAGRK"
     gene            complement(1116..1421)
                     /locus_tag="VFN38_04805"
     CDS             complement(1116..1421)
                     /locus_tag="VFN38_04805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011109.1"
                     /translation="MSDQTYDDGRARNLEGLLRALAERIRALDAEGKLLSNPAELTRL
                     IGDVKSELFHYEVRATYDTPEVADSRRIVNDAIKQAEQGSPWQNKNGPEDADDAPEW"
     gene            1767..2525
                     /locus_tag="VFN38_04810"
     CDS             1767..2525
                     /locus_tag="VFN38_04810"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HET9011110.1"
                     /translation="MHGFGTSSFVWRDIAPEIALANRTAFAIDLFGYGESDRPFDADF
                     GIALQAELVDRALTALRLPKATVVGLDLGGAIALRLASSRPERVERLVLVNPIALDEV
                     PAGDVTSLQRNTARFALRSSRGILGAAPILGEVLRRSVADPARMPDKLVARYLAPYVG
                     AEGLNHLLLLARSIDDEDMEDCELGSLPQPALIVWGDKDPWVPPEFPQRLSDTIPGSR
                     LVRLPGVGRLVPEEAPDELLNLLLEFIGAAALQD"
     gene            2605..2892
                     /locus_tag="VFN38_04815"
     CDS             2605..2892
                     /locus_tag="VFN38_04815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011111.1"
                     /translation="MAKPQRNTATRRYAGPVEPSPFEQARDELFQHIMRCGVVGAEPE
                     HVEEWFAETIKYMTDRFPELGETQIGELKTLGMRFAQPPKTRTETDAASAA"
     gene            complement(2963..3484)
                     /locus_tag="VFN38_04820"
     CDS             complement(2963..3484)
                     /locus_tag="VFN38_04820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011112.1"
                     /translation="MARPAPVKAVAGAALLAALAWAPASARAQQPGASRVQPEVRADA
                     IVGSRPAVQLGAGLQIPVGYYVRIGVDAAVGRRVGSTASLAGGSRADGRLDVLARFLL
                     DPFRQTAYGLSVGGGVSLRAEPGDRVRPALLVALDVEGRRSASGLVPAVQVGLGGGLR
                     LGIVLRRAAAGAR"
     gene            complement(3463..3990)
                     /locus_tag="VFN38_04825"
     CDS             complement(3463..3990)
                     /locus_tag="VFN38_04825"
                     /inference="COORDINATES: protein motif:HMM:NF013250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HET9011113.1"
                     /translation="MTPRRALGTIPNLLSCSRLVLAAGFVAAGATEARVGLIGVAAAT
                     DFLDGWLARRVRATSRWGALLDPIADRVFVLTVVGTFLFTGALSTGGYFILLMRDLAT
                     AVGFLVARMIPWLRPVEFKARILGKVVTVLQLVTLAAVLVLPQWVSVLLGGVAVASVL
                     SIADYTLALWRARRR"
     gene            4101..4568
                     /locus_tag="VFN38_04830"
     CDS             4101..4568
                     /locus_tag="VFN38_04830"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HET9011114.1"
                     /translation="MPSGVAALLKTVPLFKDLDDAELVEVAELCRQEKFVSSEYIFRE
                     GESGNRLYLITEGEVRISRDVPGSGEEALAVLKPGALFGEMAVFDRSERSTHAISNGG
                     TTVLTITRADFEMLLDFNRELAYKVLWAVTRLLSGRLRSSNDSLRSFLAMSMF"
     gene            4727..5074
                     /locus_tag="VFN38_04835"
     CDS             4727..5074
                     /locus_tag="VFN38_04835"
                     /EC_number="4.1.1.50"
                     /inference="COORDINATES: protein motif:HMM:NF014705.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004014 - adenosylmethionine decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0008295 - spermidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-adenosylmethionine decarboxylase"
                     /protein_id="HET9011115.1"
                     /translation="MTEPDTLAHVSADLSGIGSGPLRDAALLSGLLIAAAGAAGLNAA
                     GAPIVRAAPTGGISAVLLLDPCHVSIHSLPDRGLALVDVLAADVAGATKALDVFVRRL
                     MPAAVTSETRMRG"
     gene            5076..6647
                     /locus_tag="VFN38_04840"
     CDS             5076..6647
                     /locus_tag="VFN38_04840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011116.1"
                     /translation="MRAFLPLLLFVLVAVILVWNVVLAARIAQVRTLPRGFVTLSALA
                     GFLVVPALVIHLATTSSITGRALTSVDWLWPLTVALFAVQALYAASRRLVNPFFGFFI
                     AAYDIVIAADAVLRFVAARGTALPGVALIFLAATTATFAFVTQSPLILGSPFFFFTPM
                     IAPAFPALRRWTATLRVGLALVAGAWVVLFLSRLTAADQAVNSYGVHDPAVERLQERP
                     AGDFRIGLKILEDMDGPPATLAVRNDLALADTMGVNVVNVVLVPEEMDRAALDSLARV
                     LDAVRLDSTQVFVTLGYPSRLLPLPGRTFNDAARLRTIDPIVRRLRPDVLIPAQDPYD
                     AGTRAAGAHPVEYWQKFLTQASVIAKRVRPRTKIGVSASVYDRRDSTLYAWAAAPGSP
                     VDIVGFSLYPSPSGVRTLDAARGAADRWMQASRSPKDHWVFAAGGYPEAHGEASQARA
                     VWAALAWATTRPGIKGLIVSEAGDYGVIRGLRAADGHLRRATFAVMNAMRGLRESAAP
                     DSTPPALTVQKRIGS"
BASE COUNT          948 a         2478 c         2270 g          999 t
ORIGIN      
        1 ggaggtcgag cagggcgatc acgaacagcg ccgcgacgag caccgccgag accacgcacc
       61 agatgcagac cgcgttgatc acgaagaact cgaggtactt cagccacagg gtgaagagca
      121 gccccgaccc cgtcatcgcc accagcagcc gagacaggcg ccggtcgtcg acgagcgaag
      181 ggctcaaccc cgccagcgac accgcgagca cggcggcgta gtacgccacc ccccacgcgg
      241 ccaccgggta gccgagcagc gacgcccact tcgacgtctg caccacctcg cacgagccca
      301 ccgcgcacac gagggtgccg atgtacccga gcttgtacag ggtgaggtag agcgagacga
      361 acaggccggc cagcgccacg agcgccgcca gcatgcgctt gttcactact tcctgccggc
      421 tgcggaatcg gcgcgggccg gcgccgtctt cagcgcctgg tccacgtact tcttgaaggt
      481 gtcgtacggg agggcgctcg gcaccaccag gccgttgaac acgaaggtcg gcgtcgactg
      541 gatctgccgc ttctccgcct cggcgaggtg ggactggatc ttcgcgcgat gcgtgtcggc
      601 gtccatgcag gcgccgtact tctccatgtc gagccccacg ctcttcgcca ggtcgccgat
      661 ggggccgcgc ggccgcctcg tggcctcacc gttccagcgg tcctggttgg cgaacagcgc
      721 gtcgtgcatc tcccagaact tgccctggtc gttggcgcac gccgcggcga gcgaggcgtc
      781 ccaggtgttc ttgtgcatcg gaagcggata gtcgatgtac cgcacgcgga cctggccggt
      841 gttcaccagc cgcgtgcgga cgtcgggctc cgtgatggtg gcgtactggg cacatgccgg
      901 gcactcgaag tcggcgaact cgatcacctc caccggcgcc gacggcgacc cgaggagata
      961 gccctccgcc ttcatggccg ggaggttggg atcgagccgg gtgacctgcg tcttcgggcg
     1021 tgacgccagc cagctgagca ccgcgatgcc gaccagcacc agcaccccga gcgcgatcca
     1081 gaacgcgcgc ccggggccgc cccgcttggc ggcggtcacc actccggggc gtcgtccgcg
     1141 tcctccggtc cgttcttgtt ttgccatggg ctcccttgct ctgcctgctt gatcgcgtcg
     1201 ttgacgatgc ggcggctgtc cgccacctcg ggcgtgtcgt aggtcgcgcg gacctcgtaa
     1261 tgaaacagct cgctcttcac gtcgccgatg agtcgcgtga gctcggcggg gttcgagagg
     1321 agcttcccct ccgcgtcgag cgcgcggatc cgttcggcga gggcgcggag cagcccctcg
     1381 aggttacggg cgcgcccgtc gtcgtacgtc tggtccgaca tgctgcggtc tggtcgggga
     1441 tggtgcgcgg caacgggcgg taccgcgggt gattcgcggc acgcccgcgc cggcgcgggg
     1501 aaaactaggg tgataccggc gacatgcaag caacccccgc gcccgccccc gacgcggcgg
     1561 cgcgagaggt gcattggcct caccggactt gaccgccgcg ccccgcgcgg cgaggatgca
     1621 gccgcgccgg cctgtctggc gggtctgccg catcatccct gcacgagaag gaggctccca
     1681 tcgacgccga tctgctgcga atcccggtcg ggccgggctc gattcacgtc gagcgctacg
     1741 gccacggggg cgcgcccatc gtcctgctgc acggcttcgg gacctcgagc ttcgtgtggc
     1801 gcgacatcgc gcccgagatc gcgctcgcca atcggaccgc cttcgccatc gacctgttcg
     1861 gctacggcga gtcggaccgc ccgttcgacg ccgatttcgg catcgccttg caggccgagc
     1921 tcgtggaccg tgccctcacg gcgctccggc tcccgaaggc gaccgtggtg ggcctcgatc
     1981 tgggaggcgc gatcgccctc cgcctggcgt ccagccggcc ggaacgcgtg gagcggctgg
     2041 tgctcgtcaa cccgatcgcg ctggacgagg tgccggcggg ggacgtgacc agcctccagc
     2101 ggaacacggc ccgcttcgcc ctccgctcct cgcgtggcat cctcggcgcc gcgccgatcc
     2161 tgggcgaggt gcttcgccgg agcgtggccg acccggcgag aatgccggac aagctggtgg
     2221 cccgctatct cgccccgtac gtgggcgccg aggggctcaa ccacctgctc ctcctcgccc
     2281 ggtccatcga cgacgaagac atggaggact gcgagctggg ctcgctgccc cagccggccc
     2341 tcatcgtgtg gggcgacaag gatccctggg tgccgcccga gttcccgcag cggctcagcg
     2401 ataccatccc ggggagccgg ctggtgcgcc tcccgggcgt cggacggctc gtccctgagg
     2461 aggcccccga cgagctcctg aacctgctgc tcgagttcat cggtgcggcg gcccttcagg
     2521 actgattctt gactgtcaga actgggagaa cggagcccag caggttatat tgattgacta
     2581 gcctttcaca tcttatccca atacatggcc aagccgcaga gaaacacagc gacgcgtcgt
     2641 tatgccggtc cggtggagcc ttcgccgttc gagcaggccc gcgatgagct gttccagcac
     2701 atcatgcgtt gtggcgtcgt cggcgccgaa cccgagcacg tggaagagtg gttcgccgag
     2761 acgatcaagt acatgacgga ccggttcccc gagctgggcg agactcagat cggcgagctg
     2821 aagaccctgg gcatgcgctt cgcgcagccg cccaagacgc gtaccgagac ggacgccgcc
     2881 tcggcggcgt gacgcgctcc gacgcaggtt gaacacggca cgcccccgga actcgggggc
     2941 gtttctgttt ccggcgcctg ggtcagcggg cgccggcggc ggcccggcgc agcacgatcc
     3001 ccagccgcag tccgcccccg agccccacct gcaccgccgg cacgagaccc gacgccgagc
     3061 gccggccctc gacgtccagg gccaccagca gcgccggccg gacccggtcg cccggctccg
     3121 cgcgaaggct caccccgccg cccaccgaga gcccgtacgc cgtctggcga aagggatcga
     3181 ggagaaagcg cgcgagcacg tcgagccggc cgtcggcgcg ggagcccccc gccaggctcg
     3241 ccgtgcttcc cacgcgccgc cccacggccg cgtcgacgcc gatgcgcacg taatagccca
     3301 ccgggatctg caggccggcc cccagctgca ccgcgggtcg gcttccgacg atcgcgtcgg
     3361 cgcgcacctc cggctgcacc cgcgacgctc cgggctgctg cgcgcgggcc gacgccggcg
     3421 cccatgcgag agcggccagc agcgctgccc ccgccacggc cttcaccggc gccgggcgcg
     3481 ccacaacgcg agcgtgtagt cggcgatcga gagcaccgac gccacggcca cgccgccgag
     3541 gaggacggac acccactggg gcagcacgag caccgccgcc agcgtcacca gctgaagcac
     3601 cgtcaccacc ttgcccagga tgcgcgcctt gaactccacg gggcgcagcc agggaatcat
     3661 ccgggcgacg aggaagccga ccgcggtggc gaggtcgcgc atgagcagga tgaagtaccc
     3721 gcccgtgctc agcgcaccgg tgaacaggaa ggtgccgacc accgtgagca cgaacacccg
     3781 gtcggcgatc gggtccagca gcgcgcccca gcgcgacgtc gcgcgcacgc gccgcgcgag
     3841 ccagccgtcc aggaagtccg tcgccgcggc gactccgatc aagcccaccc gggcctcggt
     3901 ggcgccggcg gccacgaagc ccgccgcgag cacgagccgc gagcaggaca gaaggttcgg
     3961 aatggtgccg agcgcgcggc ggggagtcat cacgccgaat cataaccgtc catcggtacg
     4021 gtcgcaggga gcggttcggt cgtcttgccc cccctccggc cgttccctag cttggcgcac
     4081 cctcccccat tcccccgtcc atgccctcag gcgtcgccgc gctgctcaag accgtccccc
     4141 tgttcaagga tctcgacgat gccgagctcg tcgaggtggc cgagctgtgc cggcaggaga
     4201 agttcgtgag ctccgagtac atctttcgcg aaggggagag cggcaaccgg ctctacctca
     4261 tcacggaggg tgaggtgcgc atcagccgcg acgtgccggg aagcggggag gaggcactgg
     4321 cggtcctgaa gccgggcgcc ctgttcgggg agatggcggt gttcgaccgc agcgagcgct
     4381 ccacccacgc catctccaac gggggcacca cggtgctcac catcacccgc gccgacttcg
     4441 agatgctgct cgacttcaac cgggagctgg cgtacaaggt gctctgggcg gtgacccggc
     4501 tgctttcggg gcgcctccgc agctcgaacg actcgctgcg gtcgttcctc gccatgtcga
     4561 tgttctgaac ggcgggaagc ctggcggtcc ccctcgagcc cgatcgaagc gggctggccc
     4621 ggtcttcgct tctcggaaag gtttcgagca gctcccgcat ctcccctttt cggacggacg
     4681 acctcttgca cgtgattctc ggcgacgtcg ctcggctcgc gcactcgtga cggaaccgga
     4741 cactctcgcg cacgtcagcg ccgacctcag cggcatcggg tccggaccgc tgcgcgacgc
     4801 cgcgctcctg agcgggctgc tcatcgccgc ggcgggggcc gccggcctga acgccgccgg
     4861 cgcaccgatc gtgcgcgctg cacccaccgg cggcatctcc gccgtgctcc tcctcgatcc
     4921 ctgtcacgtg agcatccatt ccctgcccga ccgcggtctc gcgctcgtgg acgtcctcgc
     4981 cgccgatgtc gccggagcca ccaaggcgct ggacgtcttc gtgcgccgtc tcatgccggc
     5041 ggcggtcacc agcgaaacca ggatgcgggg ctgacatgcg cgcgttcctt cccctcctgc
     5101 tcttcgtcct cgtcgcggtc atcctcgtgt ggaacgtcgt gctcgccgcg cgcatcgcgc
     5161 aggtgcgcac gctgccgcgg gggttcgtca ccctctcggc gctggcgggg ttcctcgtgg
     5221 tgccggcgct ggtgatccac ctggcgacga ccagcagcat caccgggcgc gcgctcacct
     5281 cggtggactg gctctggccg ctcaccgtgg cgctgttcgc cgtacaggcg ctctacgccg
     5341 cgtcgcggcg gctggtgaac cccttcttcg gcttcttcat cgcggcgtac gacatcgtga
     5401 tcgcggccga cgccgtgctg cgcttcgtgg ccgcgcgcgg aacggcgctg ccgggcgtgg
     5461 cgctcatctt tctcgccgcc accacggcga ccttcgcctt cgtcacgcag tcgccgctca
     5521 tcctcggctc ccccttcttc ttcttcaccc cgatgatcgc gccggccttc ccggcgctcc
     5581 gccggtggac ggcgacgctg cgcgtcgggc tcgcgctggt ggccggtgcg tgggtggtcc
     5641 tcttcctgtc ccgcctcacc gcggccgacc aggcggtgaa ctcctacggc gtgcacgatc
     5701 ccgccgtgga gcggcttcag gagcggccgg ctggtgattt ccgcatcggg ctcaagatcc
     5761 tcgaggacat ggacggcccc cccgccaccc tcgcggtgcg caacgacctc gcgctcgccg
     5821 acacgatggg cgtgaacgtc gtcaacgtcg tgctcgtccc cgaggagatg gatcgcgcgg
     5881 cgctggactc cctggcgcgg gtgctcgacg cggtgcgcct cgacagcacc caggtgttcg
     5941 tcaccctcgg ctacccgagc aggctgctcc cgctgccggg ccgcaccttc aacgatgcgg
     6001 cgcggctccg cacgatcgac cccatcgtcc gtcgtcttcg ccccgacgtg ctcatcccgg
     6061 cccaggatcc ctacgacgcc ggcacgcggg cagcgggcgc gcacccggtg gaatactggc
     6121 agaagttcct cacgcaggcg tcggtgatcg ccaagcgcgt ccggccgcgc accaagatcg
     6181 gcgtgtcggc gtcggtgtac gaccgccgcg acagcacgct gtacgcctgg gcggccgccc
     6241 cgggctcacc cgtggacatc gtcggcttct ctctctatcc gtcgccgagc ggcgtccgca
     6301 ctctcgacgc ggcgcgcggc gcggccgatc gctggatgca ggcgtcgcgc tcgccgaagg
     6361 atcactgggt gttcgccgcc ggcggctatc ccgaagcgca tggggaggcg agccaggcgc
     6421 gtgcggtgtg ggcggcgctc gcgtgggcga ccacccgccc cgggatcaag gggctcatcg
     6481 tgagcgaggc gggcgactac ggcgtcattc gcgggctgcg cgcggccgac ggccacctgc
     6541 ggcgcgccac cttcgccgtc atgaacgcca tgcgcgggct gcgcgagtcc gccgcgccgg
     6601 attccacgcc gcccgccctc accgtgcaga agcggatcgg gagctgacgc caccgtcggc
     6661 ggtttcaccg gatcgctgac gaacgagggc gccgt
//
LOCUS       DASSYW010000307         2531 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_797890, whole genome shotgun sequence.
ACCESSION   DASSYW010000307 DASSYW010000000
VERSION     DASSYW010000307.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2531)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2531)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2531
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_797890"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..318
                     /locus_tag="VFN38_04845"
     CDS             <1..318
                     /locus_tag="VFN38_04845"
                     /inference="COORDINATES: protein motif:HMM:NF012422.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HET9011117.1"
                     /translation="LDGLGHAMDERFRAWGLTPAEREVALSLLKGRSHKVIAYETGRS
                     ERTVRQHAVAVYQKSGLGGRAELSAFFLEGVMLPDAGRTHEELRGGRSSSPSAQRDVT
                     NAP"
     gene            complement(315..2036)
                     /locus_tag="VFN38_04850"
     CDS             complement(315..2036)
                     /locus_tag="VFN38_04850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011118.1"
                     /translation="MNEHVNEQATTQAKANDHGIIREQPGATESVDRRRFLAQIGNAG
                     MLGAAFLTLGSRPDAWLRRLDVLAGRAGSVDRPIYMVCLGDSIMWGQGLADGQKFQTL
                     VANWIQANNPARRRVQRWNFAHSGAGFGPNREVVIGRPTPASIGRQLNATGVDPNIAE
                     LDILEARERGRQGPTTATLQEGSAGDKLGGEIPRTFPTVWRQLDLALETLRTGRDARG
                     IPKSPVLPPANPEEVELVLMDGGANDVGFLDVVLDPKRTPDQVRERVTSIIRPGIQAY
                     LPAVLKAFPNATVVVTGYYRGLSEASIHAQVAMLIEAAAKWGLANNGVFRIPQDKTAS
                     EVRAAIARMAAFDDASNAVYRDVVTQLGQGRTLFASPEFAPENAYGAPQRFVFHLTDS
                     DPAERVRNPECDKLLGEWAYGTFVTGQTSPVDTPWHLFCLDASTFHPNIAGARRYADK
                     IIAVLQQQRPAWLTAAVAAGGGGGTGGGGTAPAAAKTMRVSVNGTTAGANKTVVVTAV
                     DVATGQPVDGTVSIAGVSGKTGAPLTYSCGEETEVVVGRRTIRRPAPACAGTVQAEGY
                     RTMPFRY"
     gene            complement(2081..>2531)
                     /locus_tag="VFN38_04855"
     CDS             complement(2081..>2531)
                     /locus_tag="VFN38_04855"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HET9011119.1"
                     /translation="ATDRVASLADSAVSKTEQGVTSVVKRRPGDGDRLAADLADDGRL
                     VLAELRFTPDDQLAPGAEALLGQLAQLLGAQTSAFLVEGHVAAGAAPDADRQRSERRA
                     AAVKARLVAAGVPAARLFAIGTASTPAAAAGAAGAPAPDRIEIARMQ"
BASE COUNT          327 a          894 c          922 g          388 t
ORIGIN      
        1 ctcgacggac tgggccacgc gatggacgag cgattccggg cgtggggcct cactcccgcc
       61 gaacgcgagg tggcgctcag tctattgaag gggcggagcc acaaggtcat tgcctacgag
      121 accgggcgca gcgagcgcac cgtgcgccag cacgcggtgg cggtatatca gaagtcgggg
      181 ctcggcggac gcgcggagct gtcggccttc ttcctggagg gcgtcatgct gccggacgcg
      241 gggcggacgc acgaagagct ccgcgggggg cggagctctt cgccgtcggc gcagcgtgac
      301 gtgacgaacg cgccctagta ccggaaaggc atggtgcggt agccctccgc ctgcaccgtg
      361 ccggcgcacg ccggcgccgg ccgccggatc gttcgccggc cgacgacgac ctccgtctcc
      421 tcgccgcacg aataggtcag cggagcgcca gtcttgcccg agacaccggc gatggagacg
      481 gtgccatcga ccggctgccc ggtcgcgacg tccaccgcgg tgacgacgac ggtcttgttc
      541 gcgccagcag tggtgccgtt cacggagacc cgcatcgtct tcgcggcggc gggcgccgtc
      601 ccgccacccc ccgtcccccc gccgcccccc gccgccacgg ccgccgtgag ccaggccgga
      661 cgctgctgct ggagcacggc gatgatcttg tcggcatagc ggcgcgcgcc ggcgatgttc
      721 gggtggaagg tgctggcgtc gagacagaag agatgccacg gcgtgtcgac cggggacgtc
      781 tggccggtga cgaaggtgcc gtacgcccat tcgcccagca gcttgtcgca ctcggggttg
      841 cgaacccgct cggccgggtc gctgtcggtg aggtggaaga cgaagcgctg gggtgcgccg
      901 tacgcgttct ccggcgcgaa ttcggggctc gcgaacagcg tccgcccctg gccgagctgc
      961 gtgacgacgt cgcggtacac cgcgttgctg gcgtcatcga aggccgccat ccgcgcgatc
     1021 gccgcgcgca cctcgcttgc cgtcttgtcc tgcgggatcc tgaagacacc gttgttggcg
     1081 agcccccact tggccgccgc ctcgatcagc atcgccacct gggcgtgaat ggacgcttcg
     1141 gacagcccgc ggtagtagcc cgtcacgacg accgtcgcgt tcgggaacgc cttcagcacc
     1201 gccggcaggt aggcctggat gccgggccgg atgatcgagg tcactcgctc gcgcacctgg
     1261 tccggcgtgc gcttcgggtc gagcacgacg tccaggaagc cgacgtcgtt cgcgccgccg
     1321 tccatgagca ccagctccac ctcttccgga ttcgccggag gcagcacggg gctcttcggg
     1381 atcccacgcg cgtcgcgccc ggtgcggagg gtctcgagcg ccaggtcgag ttgccgccac
     1441 accgtcggga aggtgcgggg gatctcgccg cccagcttgt ctcccgccga gccctcctgc
     1501 agggtggcgg tggtcggccc ctgtcggccc cgctcacgcg cctccaggat gtcgagctcc
     1561 gcgatgttcg gatccacccc agtggcgttc aactgccggc cgatgctggc cggcgtgggg
     1621 cgcccgatca cgacttcccg attgggaccg aaccccgcgc ccgagtgggc gaagttccag
     1681 cgctgcaccc ggcggcgggc cgggttgttg gcctggatcc agttggcgac gagcgtctgg
     1741 aacttctggc cgtccgcgag gccctgcccc cacatgatgg agtcgccgag acataccatg
     1801 tagatggggc gatcgaccga gccggccctg ccggccagga catcgagtcg tcgcagccac
     1861 gcatcgggcc ggctgcctag tgtcaggaag gccgcgccga gcatgccggc gttgccgatc
     1921 tgcgcgagga acctccgccg gtccaccgac tcggtcgccc ccggctgctc gcggatgatg
     1981 ccgtggtcgt tcgccttcgc ctgcgtggtt gcctgttcgt tcacatgctc gttcatcggt
     2041 gtgttccggt gaggggtgct cggtgagttg atgcgggcgc tcactgcatg cgggcgatct
     2101 cgatgcggtc gggagccgga gcgccggccg ctcccgcggc tgcggcaggc gtggaggccg
     2161 tgccgatggc gaacagccgt gccgccggca ctcccgccgc gacgagccgc gccttcaccg
     2221 ccgcggctcg gcgctcgctg cgctggcgat ccgcgtcggg tgcggcaccg gcggcgacgt
     2281 ggccttccac gagaaaggcg ctggtctgcg cgccaaggag ttgcgcgagc tgcccgagca
     2341 gcgcctcggc gccgggcgcg agctggtcgt cgggggtgaa gcgcaactcg gcgagcacga
     2401 ggcgtccgtc gtcggcgagg tccgcggcca gccggtcgcc gtcgccgggc cggcgcttca
     2461 ccacgctcgt gacaccctgc tccgtcttgc tcaccgcgct gtcggcgagc gacgcgacgc
     2521 ggtcggtggc g
//
LOCUS       DASSYW010000308         2164 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_630131, whole genome shotgun sequence.
ACCESSION   DASSYW010000308 DASSYW010000000
VERSION     DASSYW010000308.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2164)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2164)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2164
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_630131"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..388
                     /locus_tag="VFN38_04860"
     CDS             <1..388
                     /locus_tag="VFN38_04860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011120.1"
                     /translation="LVLALVALGWLARSALLRRHGVRDAETWSCGYVLGTPRMQYTAS
                     SFAAPLLSTFGRMSGVVVHRTAHALHTEPVDLVLDRSAIPAWHRVRRAALRLRPIQQG
                     RLSAYLIYVMAAVVALLAYLGLEIRR"
     gene            385..1323
                     /locus_tag="VFN38_04865"
     CDS             385..1323
                     /locus_tag="VFN38_04865"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: protein motif:HMM:NF012373.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit H"
                     /protein_id="HET9011121.1"
                     /translation="MTQPAGDAWSFASAVISLGVLLAAAPIVPGVATRTRAILTGRRG
                     QPVWQLYSDLWKLGRKGAVYSTTTTWAFRLAPVALVVTTVVACAFVPLDGRRSLIAFT
                     GDAVAFAYLLGLGRFLLVLGAMDTGSSFEGMGASREVSFAALVEPGLFVTLAALAIAT
                     QRLSLSGMVGPELWQRWTLVAPSVILFAASLFVLMLAETARVPVDDPTTHLELTMIHE
                     VMVLDHSGPDFASILYANALKMGLFTTLILDLLVPRAKLVAWAAPLILVGGLMAIGIA
                     VGIVESTMARLRLPKVPRFISGGTALGLFGLILVLQ"
     gene            1344..1982
                     /locus_tag="VFN38_04870"
     CDS             1344..1982
                     /locus_tag="VFN38_04870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011122.1"
                     /translation="MVSLGQLVLFLIVFTDFAVLGNSRLSACIRAVALQGLLLGLLPP
                     ILFGTAAAHTLVLAVGTVIVKAIVLPAFLRWAIREASVRREVEPLIGYMASLLLGVAA
                     LAVSFAVANVLPVAGHQPGALIPVALTTVIIGLIVLITRAKAVTQVLGYLMLENGIYL
                     FGLTQLERVPFLVEVGVLLDVFVAVFIMGIVVFHINREFDSISAARLTELRE"
     gene            1982..>2164
                     /locus_tag="VFN38_04875"
     CDS             1982..>2164
                     /locus_tag="VFN38_04875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011123.1"
                     /translation="MRYLTGEVVLLALVLLPALGGGLAYLLRSALLRSILLVLVALLH
                     TALVALTWMRPGASAAG"
BASE COUNT          241 a          723 c          767 g          433 t
ORIGIN      
        1 gctcgttctg gcgctggtcg cgctcggctg gctcgcccgg tccgcgctgc tccggcgtca
       61 cggcgtccgc gacgcggaaa cctggtcctg cggctacgtc ctcggcacgc cgcgcatgca
      121 gtacacggca tcgtcgttcg cggcacccct gctctcgacg ttcggtcgca tgagcggcgt
      181 cgtcgtgcat cgcacggcgc atgcgctgca caccgagccc gtggatctgg tcctcgatcg
      241 ttccgcgatc ccggcgtggc atcgcgtgcg gcgtgccgcg ctgcggctcc gtcccatcca
      301 gcagggccgc ctctccgcgt atctgatcta cgtgatggcg gcagtcgtgg cgctgctggc
      361 gtacctcggg ctggagatcc gtcgatgacg cagccggccg gggatgcgtg gtcgtttgcc
      421 agcgcggtca tttcgttagg cgtgctcctc gccgccgcgc cgatcgttcc cggcgtggcc
      481 acgcgaacgc gggcaattct gaccggtcgc cgagggcagc cggtgtggca gctctattcg
      541 gacctgtgga agctcgggcg aaagggtgcg gtgtacagca ccacgacgac gtgggcgttt
      601 cgcctggcgc ccgtcgctct cgtggtcacg acggtcgtcg cgtgtgcgtt cgttccgctc
      661 gacggacgcc gctcgctcat cgcgttcacc ggcgatgcgg tggccttcgc gtacctgctc
      721 gggctcgggc ggttcctgct cgtcctcggc gcaatggaca cgggatcgag cttcgaggga
      781 atgggcgcga gtcgtgaggt gtcgttcgcg gcgctcgtgg agccggggct gttcgtgacg
      841 ctcgcggcac tcgcgatcgc aacgcagcga ttgtcgctca gcggcatggt cgggccggag
      901 ctgtggcagc gatggacgct cgtcgcccct tcggtgattc tgttcgcggc gagcctgttc
      961 gtgctcatgc tggccgagac ggcgcgagtg ccggtggatg acccgacgac gcatctcgag
     1021 ctgacgatga tccacgaggt catggtcctc gaccacagcg ggcccgactt cgcctccatt
     1081 ctgtacgcca acgcgctcaa gatggggctg ttcacgacgc tcattctcga cctgctggtc
     1141 ccgagggcga agctcgtggc gtgggcggcg ccgctgatcc tggtgggcgg gttgatggcg
     1201 atcggcatcg cggtcggcat cgtcgagtcg acgatggcgc ggctgcgcct gccgaaggtg
     1261 ccgcgcttca tctccggcgg gaccgcgtta ggtctcttcg ggctcatcct ggtccttcag
     1321 taacgactgc ccgaggcgtt cgcatggtat cgctcggcca actcgtgctg ttcctcatcg
     1381 tgttcaccga cttcgcggtg ctcggcaact cgcggctgtc cgcgtgcatc cgggccgtcg
     1441 cgctccaggg gctgctcctc gggctcctgc ccccgatcct gttcggcacc gccgcggctc
     1501 acacgctggt gctcgcggtc ggaaccgtca tcgtgaaggc gatcgtcctg cctgctttcc
     1561 tgcggtgggc cattcgtgag gcgtcggtgc gccgcgaggt cgagccgctc atcggctaca
     1621 tggcgtcgct gctcctcggc gtcgcggcgc tcgcggtgtc gttcgcggtg gcgaacgtgc
     1681 tgccggtcgc cggacaccag ccgggcgcgc tcatcccggt ggcgctcacc acggtgatca
     1741 tcgggctcat cgtgctgatc acgcgcgcga aggcggtcac ccaggtgctg ggctacctca
     1801 tgctggagaa cgggatctac ctcttcggcc tcacgcagct ggagcgcgtg ccgttcctcg
     1861 tcgaggtggg agtgctgctc gacgtgttcg tggcggtctt catcatgggc atcgtggtgt
     1921 tccacatcaa tcgcgagttc gactcgatct cggcggcgcg gctgacggag ctccgggagt
     1981 gatgcgatac ctgacgggcg aggtggtcct gctggcgctg gtgctgctgc cggcgttagg
     2041 cggcggactc gcgtacctgc tgcggagcgc gctgctgcgg tcgatcctgc tggtgctcgt
     2101 ggcgctcctg cacacggcgc tcgtcgcgct cacctggatg cgacccggcg cctcggcggc
     2161 gggc
//
LOCUS       DASSYW010000309         2044 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1536787, whole genome shotgun sequence.
ACCESSION   DASSYW010000309 DASSYW010000000
VERSION     DASSYW010000309.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2044)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2044)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2044
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1536787"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            15..>2044
                     /locus_tag="VFN38_04880"
     CDS             15..>2044
                     /locus_tag="VFN38_04880"
                     /inference="COORDINATES: protein motif:HMM:NF040057.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative LPS assembly protein LptD"
                     /protein_id="HET9011124.1"
                     /translation="MRVRDWAVVLSIALAGAAMPARAQVGRPGQAPRPVPVRGDTIRQ
                     RGDTAAARDTLGKANFAPPDSVMLRLLNTPGYSVTQYQGEQISFDAVTRAIQLTTKAI
                     VQRDSQLVKSDTIKYSGTGSEVRVGTDSTGRSVFVTPGQAPIVSRGPGTYDIASRRAS
                     VRDIRTSIPQSGEVLQITGDRVVVVAGRDSLKSANDATYYLRDGTITACDDSVPDYYF
                     KAKEIKRTGSFVVARPAVLYIGDVPVMWLPFLFQDIRGGRHSGILSPNVGVSDIVRNS
                     PSYRRQVEGLGYYWAISDFLDAQASFDWRSSAGQVDLNDVSYTRYNGEFRYRWLERYV
                     TGNLATAYTIQGDARNTAISWGHSQDFTRNSSLRVDANYVSNTRIQRSTTVNPYAVLS
                     TIRSSATYHQKVGPADFTLGGSRSQQPGRSQTDQTFPSLSVNTSPLNLGSWLTWTPSL
                     SYTSHQITGIDQPSSLGLLLRQGLDSLGRPAILGDTLRRNAYDSNLSFDTPLTIFGYQ
                     LGNRFTISSHRNDFPESAIVTDVNTGVSREQIFASTYGTSVDWTPQFTLPPLARNDFN
                     LSASVSFANVEGSAYWIRNERTGGQWVHQSKRPMFSVSASPTLFGLFGGFGPFTRIRH
                     SISPTIGYSYAPQADVSDAYLAALGRTRVGANGEPTGYLGALRQNALSFGLST"
BASE COUNT          330 a          732 c          687 g          295 t
ORIGIN      
        1 gaggaggcga cggcgtgagg gtgcgcgact gggcggtcgt gctctcgatc gcgctcgccg
       61 gcgcggcgat gcccgcgcgc gcgcaggtgg ggcggccggg acaggcgccg cgccccgtgc
      121 cggtgcgtgg cgacacgatc cgccagcgcg gcgataccgc cgcggcgcgg gacaccctgg
      181 ggaaggcgaa cttcgcgccc cccgactcgg tgatgctccg gctgctcaac acgccgggct
      241 acagtgtgac gcagtaccag ggcgagcaga tctcgttcga cgcggtgacg cgggcgatcc
      301 agctcacgac gaaggcgatc gtgcagcgcg actcgcagct cgtgaagtcg gacaccatca
      361 agtacagcgg caccggcagc gaggtgcgcg tcggcacgga ttcgaccggc cgcagcgtgt
      421 tcgtcacgcc cggccaggcg ccgatcgtca gccgcgggcc gggcacgtac gacatcgcca
      481 gccggcgcgc gagcgtgcgc gacatccgca cgtccatccc gcagagcggc gaagtcctcc
      541 agatcaccgg ggaccgggtg gtcgtcgtcg ccggccgcga ctcgctgaag agcgccaacg
      601 acgccacgta ctacctgcgc gacggcacga tcaccgcctg cgacgactcg gtgcccgact
      661 actacttcaa ggcgaaggag atcaagcgca ccggctcgtt cgtcgtcgcg cggccggcgg
      721 tgctgtacat cggcgacgtc ccggtgatgt ggctcccctt cctgttccag gacatccgcg
      781 gcgggcggca cagcggcatc ctctcgccga acgtgggcgt gagcgacatc gtccgcaaca
      841 gcccgtcgta tcggcggcag gtggaaggcc tgggctacta ctgggcgatc agcgacttcc
      901 tcgacgcgca ggcgtcgttc gactggcgca gctcggccgg acaggtggac ctcaacgacg
      961 tctcgtatac gcgctacaac ggcgagttcc gctatcgctg gctggagcgc tacgtcaccg
     1021 gcaatctcgc gacggcctac accatccagg gcgacgcgcg caacacggcg atcagctggg
     1081 ggcactcgca ggacttcacg cgcaacagct ccctgcgcgt ggacgccaac tacgtgagca
     1141 acacgcggat ccagcgctcc acgaccgtca atccgtacgc ggtgctctcg acgatccgct
     1201 cgtcggcgac ctatcaccag aaggtggggc cggcggactt caccctcggc ggctcgcgga
     1261 gccagcagcc ggggcggagc cagaccgacc agaccttccc cagcctcagc gtcaacacca
     1321 gcccgctcaa cctggggagc tggctcacgt ggacgccgag cctgagctac acgtcgcatc
     1381 agatcacggg catcgatcag ccgtcgtcgc tcggcctgct gctgcgccag gggctcgatt
     1441 cgcttggccg accggcgatc ctcggcgaca cgctgcggcg gaacgcgtac gacagcaacc
     1501 tgtccttcga cacgccgctc acgatcttcg gctatcagct cggcaaccgc ttcacgatct
     1561 cgtcgcaccg gaacgacttt cccgagtcgg cgatcgtgac cgacgtgaac acgggcgtga
     1621 gccgggagca gatcttcgcg tccacgtacg gcacgtcggt cgactggacc ccccagttca
     1681 ccctgccgcc gctggcgcgg aacgacttca acctgtcggc gtcggtgtcg ttcgcgaacg
     1741 tcgaggggtc ggcgtactgg atccgcaacg agcgcaccgg gggccagtgg gtgcaccagt
     1801 ccaagcggcc gatgttcagc gtgtcggcgt cgcccaccct gttcgggctg ttcggcggct
     1861 tcgggccgtt cacgcgcatc cggcattcca tctcgccgac gatcggctac agctatgcgc
     1921 cgcaggccga cgtgagcgac gcctatctcg ccgcgctcgg ccgcacgcgc gtcggcgcga
     1981 acggtgagcc cacgggctac ctgggggcgc tccgccagaa cgcgctcagc ttcggcctga
     2041 gcac
//
LOCUS       DASSYW010000310         2411 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_298494, whole genome shotgun sequence.
ACCESSION   DASSYW010000310 DASSYW010000000
VERSION     DASSYW010000310.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2411)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2411)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2411
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_298494"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..265)
                     /locus_tag="VFN38_04885"
     CDS             complement(<1..265)
                     /locus_tag="VFN38_04885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011125.1"
                     /translation="MTDAGRAPRSEEELDEALSRPSPALVATLARLPGDLLVLGAGGK
                     MGPSLARMARRADPARRVVAVSRWSSPDAEHALQAHGVETVRAD"
     gene            complement(262..1041)
                     /locus_tag="VFN38_04890"
     CDS             complement(262..1041)
                     /locus_tag="VFN38_04890"
                     /EC_number="2.3.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acylglycerol-3-phosphate O-acyltransferase"
                     /protein_id="HET9011126.1"
                     /translation="MQPILSAWAWIAAVGAVLFGFFYVAAVWLVTAPFDRGRYHAGRA
                     FRQLAMAAAKLNPLWHFETDGTPPADPRHPYVAVSNHESYADIFLISHFPWEMKWLSK
                     DTIFRIPVMGWMMRMAKDIPIKRGKRESVVSAMQGCRDRLGRKVSVMIFPEGTRSRTE
                     ELLPFKDGAFKLAIEAQVPILPIAVAGTRDCMAKHSFAFRRARAKARVLPPIPTAGMT
                     NADVATLRDRTRALIDAERRVLQRELAGELSGGEVGAARVG"
     gene            complement(1096..1560)
                     /locus_tag="VFN38_04895"
     CDS             complement(1096..1560)
                     /locus_tag="VFN38_04895"
                     /inference="COORDINATES: protein motif:HMM:NF040124.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6526 family protein"
                     /protein_id="HET9011127.1"
                     /translation="MTAIVTSGAVAPPAQTYATHRRHFPLFHYFALPILLANVAVAVG
                     HAIRRPSMWNAWLVVVSLALVAGLVASRASTLYVQNRLIALEMRLRLAATLPPELRAR
                     IPELRLKHLIGLRFAGDGELAGLVERCLRGELATADAIKREIRDWRPDFARA"
     gene            complement(1588..2037)
                     /locus_tag="VFN38_04900"
     CDS             complement(1588..2037)
                     /locus_tag="VFN38_04900"
                     /inference="COORDINATES: protein motif:HMM:NF014688.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SufE family protein"
                     /protein_id="HET9011128.1"
                     /translation="MTDTAAEQPLPPTVARVLSRFRALGREEKMQTLLHFAKKLEPLP
                     ERFAELDRAPYTVPECQTRVDLFPELRDGKLYFYADLDPRQSPTIAAFLSILFSAING
                     QPPATTLAIPNDFVRQMMEGIGLAGREVGLNAMLARVKRHAQRALDG"
     gene            2124..>2411
                     /locus_tag="VFN38_04905"
     CDS             2124..>2411
                     /locus_tag="VFN38_04905"
                     /inference="COORDINATES: protein motif:HMM:TIGR03562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family peroxiredoxin"
                     /protein_id="HET9011129.1"
                     /translation="MPTRKANAVWQGGLQKGNGTFKGQTGLGGQYNFSSRFENGAGSN
                     PEELLAAAHAACFSMALAVGLEQGGFTPTKVETDAACTVEKIGAGFKITRMQ"
BASE COUNT          394 a          748 c          931 g          338 t
ORIGIN      
        1 ggtcggcgcg cacggtctcc acgccgtggg cctgcagggc gtgctcggcg tcgggactcg
       61 accatcgcga gacggcgacg acgcgccggg cggggtcggc gcgcctggcc atgcgcgcga
      121 gcgacgggcc catcttgcca ccggcgccga gcaccagcag gtcgccggga aggcgagcga
      181 gcgtggcgac gagcgccggg cttgggcggg agagcgcttc gtcgagctcc tcctccgagc
      241 gcggcgcgcg cccggcgtcc gtcatccgac gcgtgcggcg ccgacctcgc cgccggacag
      301 ctcacccgcg agctcgcgct gcagcacgcg ccgctcggcg tcgatgaggg cgcgggtgcg
      361 gtcgcgcagc gtcgcgacat ccgcgttggt catgccggcc gtgggaatcg gcggaaggac
      421 gcgagccttg gcgcgcgcgc ggcggaaggc gaagctgtgc ttggccatgc agtcgcgcgt
      481 gccggcgacg gcgatgggca ggatgggcac ctgcgcctcg atggcgagct tgaacgcgcc
      541 atccttgaag gggagaagct cttcggtcct ggagcgcgtg ccttcgggaa agatcatcac
      601 gctgaccttc cggccgagcc ggtcgcgaca gccctgcatg gcgctcacga cgctctcgcg
      661 cttgccgcgc ttgatcggga tgtccttcgc catgcgcatc atccagccca tgacggggat
      721 cctgaagatc gtgtccttgg acagccactt catctcccac gggaagtggc tgatgaggaa
      781 gatgtccgcg tacgactcgt ggttggagac ggccacgtaa ggatggcgcg gatcggcggg
      841 cggcgtgccg tcggtctcga agtgccagag cgggttgagc ttcgcggccg ccatcgcgag
      901 ctgacggaag gcgcggccgg cgtggtatcg accacgatcg aagggcgcgg tgacgagcca
      961 gacggcggcg acgtagaaga agccgaagag cacggcgccg acggcggcga tccaggccca
     1021 ggcgctgagg atgggttgca tgcgtagcgg ttcgcgaccg cgcgatcgga cgttgatgga
     1081 ggagcgatgc tcgggctagg cccgcgcgaa gtcgggacgc cagtcgcgga tctcgcgctt
     1141 gatggcgtcg gcggtggcaa gctcaccacg caggcatcgc tccaccagcc cggccagctc
     1201 gccatcgccg gcgaatcgca gcccgatgag gtgcttcagg cgcagctcgg ggattctcgc
     1261 ccgcagctcc ggcggcagag tggcggcgag ccggagtcgc atctcgaggg cgatgaggcg
     1321 gttctgcacg tagagcgtgg atgcgcggct cgcgaccagc cccgccacga gcgccagcga
     1381 caccacgacg agccacgcgt tccacatcga cggtcggcgg atggcatgac ccacggccac
     1441 cgcgacgttg gcgagcagga tggggagcgc gaagtagtgg aacagcggaa agtgacggcg
     1501 atgggtcgcg taggtctgcg cgggtggcgc gacggcgccg gaggtgacga tcgcggtcat
     1561 gggtgtgcgt gggagaggag tgacacgtca gccgtcgagg gcgcgctgcg cgtggcgctt
     1621 cacgcgagcg agcatcgcat tcaaccccac ctcgcgaccg gccaggccga tcccctccat
     1681 catctgccgc acgaaatcat tggggatggc gagcgtggtc gcgggcggct ggccgttgat
     1741 ggccgagaag aggatcgaga ggaaggcggc gatggtgggc gactgccggg gatcgaggtc
     1801 ggcgtagaag tagagcttgc cgtcgcggag ctcggggaac aagtcgaccc gggtctggca
     1861 ttccggtacg gtatagggcg cgcgatcgag ctcggcgaag cgctcgggaa gcggctcgag
     1921 ctttttggcg aagtgcagca gcgtctgcat cttctcctcg cgcccgaggg cgcggaatct
     1981 gctcagtacc cgcgccactg tgggcgggag gggctgttcc gcggccgtat ccgtcatggc
     2041 aggagataaa ccggtcgggc gacggtgcgt caagcgccgt cgacccgtgc accttcacga
     2101 cagttcagca cgaggatcga gcgatgccga ccagaaaggc gaacgcggtg tggcagggcg
     2161 gcctgcagaa gggcaacggg acgttcaagg gccagacggg gcttggcggg cagtacaact
     2221 tctcctcgcg cttcgagaac ggcgcgggct ccaacccgga ggagctgctg gcggcggcgc
     2281 acgcggcctg cttcagcatg gcgctggcgg tagggctgga gcagggcggc ttcacgccca
     2341 cgaaggtgga gacggacgcc gcctgcaccg tggaaaagat cggcgcggga ttcaagatca
     2401 cgcgcatgca g
//
LOCUS       DASSYW010000311         2311 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1620524, whole genome shotgun sequence.
ACCESSION   DASSYW010000311 DASSYW010000000
VERSION     DASSYW010000311.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2311)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2311)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2311
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1620524"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..305)
                     /locus_tag="VFN38_04910"
     CDS             complement(<1..305)
                     /locus_tag="VFN38_04910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011130.1"
                     /translation="MAATRQVRVLAAALLVGAAACGDQGPRGGPEWLSAAARPVTLTP
                     TLDTGAAVAKVITSARGGTLSATGADGTRYRLSIPEGALLSDAVITLVPIASLKGLPL
                     "
     gene            complement(305..1540)
                     /locus_tag="VFN38_04915"
     CDS             complement(305..1540)
                     /locus_tag="VFN38_04915"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HET9011131.1"
                     /translation="MQTLTRLTVAAALAGAMASSTPAAASAQGIFGRMKDRAAEAAKR
                     KVEERTEKRAGEATDAALDKAECKVPGTTCDDSEKSEGNAAAASADKGKSAKLKPGQG
                     AWKNYDFVPGDRVIFAEDFSDADVGDFPKRLTFKSGNIEVVEWSGARYLSTNTFGSRF
                     SLPLPETLPERFTLELDYSAAGGNGMTIYFTDPDKGSDRTYVDMGTWSGGLRNGGIDA
                     MGSPANQYGYKDAVFPVRIMADGKHVKVYMGETRVANVPNATLGRATRIWFVLPGREE
                     RAAMIGNIRVAAGGKKLYDALSANGRVATQGILFDVGSDRIRPESTPTLKEITAMLKE
                     HAGLKLSIEGHTDNVGDDDANEALSEQRAAAVKAYLVSQGIADGRLTSKGLGASKPVA
                     SNDRPEGRQQNRRVELVKR"
     gene            complement(1582..1782)
                     /locus_tag="VFN38_04920"
     CDS             complement(1582..1782)
                     /locus_tag="VFN38_04920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011132.1"
                     /translation="MAHLQDSSPRPAPDRLAHYMIRVSRRGTDDQAISGLVERLGSGE
                     KERFDSASDLLRLLTAWPGELA"
     gene            1908..>2311
                     /locus_tag="VFN38_04925"
     CDS             1908..>2311
                     /locus_tag="VFN38_04925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011133.1"
                     /translation="MRLRTLGELCLASDEGVPLLRGRRRELVLLAYLARRTPRAVSRA
                     DLATLFWHDRPAERARLSLRQTLFKLRQLIPSGLEVTPEQVRLDPAAVSVDVARLEHA
                     SAAGEHQLALRELGGEFLPEAEDAGGEEWRLWL"
BASE COUNT          264 a          830 c          816 g          401 t
ORIGIN      
        1 agcggcagcc ccttgagcga ggcgatgggg acgagcgtga tcacggcgtc gctcagcagc
       61 gcgccttccg ggatgctcag ccggtagcgc gtgccgtcgg cgccggtggc gctcagggtg
      121 ccgcccctcg ccgaggtgat caccttcgcc accgcggccc ccgtgtcgag ggtgggggtg
      181 agcgtcaccg gcctcgcggc ggcgctcaac cactcagggc cgccgcgggg tccctggtcc
      241 ccgcaggcgg cggcgcccac cagcagcgcc gccgcgagca cgcggacctg tcgcgttgcc
      301 gccactagcg cttcaccagc tcgacgcgcc ggttctgctg gcgtccttcc ggcctgtcgt
      361 tgctggcgac gggcttgctc gcgcccagcc ccttcgacgt cagccgcccg tccgcgatgc
      421 cctgcgacac gaggtacgcc ttcaccgcgg cggcgcgctg ctccgacagc gcctcgttcg
      481 cgtcgtcgtc gcccacgttg tcggtgtgcc cttcgatgct cagcttcagg ccggcgtgct
      541 ccttcagcat cgccgtgatc tccttcagcg tcggggtgct ctccggacgg atccggtcgc
      601 tgccgacgtc gaacaggatc ccctgggtgg ccacgcgccc gttcgccgac agggcgtcgt
      661 acagcttctt cccgccggcc gcgacgcgga tgttgccgat catcgccgca cgctcctcgc
      721 gacccggcag cacgaaccag atccgggtcg cccggccgag ggtcgcattc gggacgttcg
      781 ccacgcgcgt ctcgcccatg tacaccttga cgtgcttgcc gtcggccatg atgcgcaccg
      841 ggaacacggc gtccttgtat ccgtactggt tcgccgggct gcccatggca tcgatgccgc
      901 cgttgcgcag cccacccgac caggtcccca tgtcgacgta cgtccggtcg ctgcccttgt
      961 ccggatcggt gaagtagatc gtcatgccat tgccgccggc cgcggaatag tcgagctcca
     1021 gggtgaaccg ctcggggagc gtttccggca gcggcaggga gaacctgctg ccgaaggtgt
     1081 tggtgctcag gtagcgcgcg ccgctccact ccaccacttc gatgttgccc gacttgaagg
     1141 tgaggcgctt cgggaagtcg cccacgtcgg cgtcgctgaa gtcctcggcg aagatcaccc
     1201 ggtcgccggg cacgaagtcg tagttcttcc aggcaccctg gcccggcttc agcttcgcgc
     1261 tcttgccctt gtcggccgac gcggcggcgg cgttgccctc gctcttctcg ctgtcgtcgc
     1321 acgtggtgcc gggcaccttg cactcggcct tgtccagcgc cgcatcggtg gcctcgccgg
     1381 cccgcttctc ggtgcgctcc tcgaccttcc gcttcgcggc ttccgccgcc cggtccttca
     1441 tgcggccgaa gatcccctgc gcggacgcgg cggcgggggt ggacgacgcc atcgcgcccg
     1501 cgagcgcggc ggcgacggtc aggcgggtga gagtctgcat cattgcctca ttgaaggtgt
     1561 tggacggagc gacaggacgg ctcacgcgag ctcgcccggc catgccgtga gcagccgcag
     1621 aaggtcggac gcactgtcga accgttcctt ctcaccgctg cccagccgtt ccaccagtcc
     1681 gctgatcgcc tggtcgtccg tgccgcgccg gctgacgcgg atcatgtagt gggcgaggcg
     1741 gtcgggggcc gggcggggcg acgagtcctg caggtgagcc atgtcacggt ctccgggtgg
     1801 gtcggtcgcg ggttggcgct catgctaggc gcgagcgtat ccgggggcgt tattcttggt
     1861 gttatgccgc tcgcgtcccc cttccccgcc gcctcgaccc tccaatcgtg aggttgagaa
     1921 ccctcgggga gctctgcctg gcgtcggacg agggggtgcc gttgctgcgg ggccgtcggc
     1981 gcgagctcgt gctgctggcc tacctggcgc gccggacgcc gcgcgcggtg tcacgggccg
     2041 atctcgcgac gctgttctgg cacgaccgtc ccgccgagcg ggcgcgcctg tcgctgcgtc
     2101 agacgctgtt caagctgcgg caactgatcc cgtccggcct cgaggtgacg ccggagcagg
     2161 tccggctgga cccggccgcc gtctccgtgg acgtggcgcg gctggagcac gcgtcggccg
     2221 cgggcgagca ccagctggcg ctgcgcgagc tggggggcga gttcctgccg gaggcggagg
     2281 atgccggcgg cgaggagtgg cggctgtggc t
//
LOCUS       DASSYW010000312         3237 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_224609, whole genome shotgun sequence.
ACCESSION   DASSYW010000312 DASSYW010000000
VERSION     DASSYW010000312.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3237)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3237)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3237
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_224609"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..327)
                     /locus_tag="VFN38_04930"
     CDS             complement(<1..327)
                     /locus_tag="VFN38_04930"
                     /inference="COORDINATES: protein motif:HMM:NF014619.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="laccase domain-containing protein"
                     /protein_id="HET9011134.1"
                     /translation="MPDVREGGEVVDHFAALGISAFTTGRATGSFGMQTTEPVRDVTA
                     RWGALRAFLGGPAVRLATAFQVHGNDVLLHGGGWQGHLRGPHADGHLARERGTAMAVT
                     VADCVPV"
     gene            complement(351..1649)
                     /gene="murA"
                     /locus_tag="VFN38_04935"
     CDS             complement(351..1649)
                     /gene="murA"
                     /locus_tag="VFN38_04935"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008760 - UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HET9011135.1"
                     /translation="MNALQFVVEGGHRLSGRIRPSGNKNAALPIVAAALLCEEPVYLE
                     NVPRIKDVETLVELLKSVGASAEWTSRNTLTIHAKSLSAKQLDPERCKKIRASILLAA
                     PLLARCGELELPPPGGDVIGRRRVDTHFLALQQLGASFTLDEAFILKATKLRGADVFL
                     DEPSVTATENALTAAVAAEGTTVLRNAASEPHVQDLAHFLVAMGASIEGIGTNTITIH
                     GGRPLHGCTHEIGPDHIEVGSFIGLAAVTRSEITIERAGVEHLRSTLMGFERLGVVCR
                     VEGADLVVPANQEMKIRSDLGGAVPKLEDQPWPAFPADTMSIALVTATQCEGVIVIHE
                     KMFESRLFFVDKLIGMGARIVLCDPHRAVVVGPTKLHSGRVESPDIRAGMAMLLAALC
                     ADGESIIDNVGQIERGYERIDERLRALGATVQRGEDRRTR"
     gene            1971..2624
                     /locus_tag="VFN38_04940"
     CDS             1971..2624
                     /locus_tag="VFN38_04940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011136.1"
                     /translation="MTVSFARAGAWLLVQAGQLPQHADTVLMRQVGNDRGWFETATAI
                     ASGLMSVALLVLTVALVPAAWNFRKSYAKVSDLLDRVYGDINPLMRHASAIADNVNYV
                     TTSIRTDVQQVNATIAAANQRLQQAMALTEQRLNEFNALLEVVQDEAESMFVATASTV
                     RGVRTGAAALHHEDDEEDADRASLPTSEELEDGYDDSDAPEAGTTRPRVRPRRRDWA"
     gene            2563..2967
                     /locus_tag="VFN38_04945"
     CDS             2563..2967
                     /locus_tag="VFN38_04945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011137.1"
                     /translation="MRPKRGPRVRESAPGGGTGRDAQYDLLTAALIGAAIGATATLML
                     RRGPSGQRPVAPVLRGAKWAGREALAAGTAGAGWARSRGGELLDRIPTDEIEESVRET
                     VSEARDRIDGFVRSELTDLRKALRRQRKRLGV"
     gene            2969..>3237
                     /locus_tag="VFN38_04950"
     CDS             2969..>3237
                     /locus_tag="VFN38_04950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc dependent phospholipase C family protein"
                     /protein_id="HET9011138.1"
                     /translation="MTRSALARLGLLAAAALVLLVLLPATAHAWTPGTHVFLGEAVLR
                     SLIQLPDAVADLLRAFPYDFLYGSIAADTSMAKKYVPTGRHCHSWA"
BASE COUNT          457 a         1112 c         1211 g          457 t
ORIGIN      
        1 caccggtacg cagtcggcca ccgtcaccgc catcgcggtg cctcgctcgc gggcgagatg
       61 gccgtcggcg tgcgggccgc gcaggtggcc ctgccagccg ccgccatgca ggagcacgtc
      121 gttgccgtgc acctggaagg cggtggccag gcgaacggcg ggcccgccga ggaacgcgcg
      181 cagcgcgccc caccgcgccg tgacgtcgcg gaccggctcc gtcgtctgca tcccgaagct
      241 gccggtcgcg cgtccggtgg tgaaggcgga gatgccgagg gcggcgaagt ggtcgacgac
      301 ttccccgccc tctcgaacgt cgggcaccgg tgcggtgccg tgcgcggcgc tcaccgggtg
      361 cgacggtcct cgccgcgctg gaccgtcgcc ccgagcgcgc ggaggcgctc gtcgatccgc
      421 tcgtagccgc gctcgatctg tcccacgttg tcgatgatgc tctcgccatc ggcgcagagg
      481 gcggcgagca gcatcgccat cccggcgcgg atgtcggggg actcgacgcg cccgctgtgc
      541 agcttcgtgg gcccgacgac gaccgcacga tgcgggtcgc agaggacgat gcgcgcgccc
      601 atgccgatca gcttgtcgac gaagaacagc cgcgactcga acatcttctc gtggatgacg
      661 atgacccctt cgcactgcgt cgccgtgacg agggcgatgg acatcgtatc ggccgggaag
      721 gcgggccaag gctggtcctc gagcttcggc accgcgccgc cgaggtcgct ccggatcttc
      781 atctcctgat tggcggggac gacgaggtcg gccccttcca cgcggcacac cacgccgagg
      841 cgctcgaagc ccatgagggt ggagcggagg tgctcgacgc cggcgcgctc gatggtgatc
      901 tcggagcggg tgacggcggc gaggccgatg aacgagccga cctcgatgtg gtcgggcccg
      961 atctcgtgcg tgcagccgtg gagcggccgg ccgccatgga tggtgatcgt gttggtgccg
     1021 atcccctcga tgctggcgcc catggcgacg aggaagtggg cgaggtcctg gacgtgcggc
     1081 tcgctggcgg cgttgcgcag cacggtggtg ccctcggcgg cgacggcggc cgtgagagcg
     1141 ttctcggtgg cggtgacgct cggctcgtcg aggaagacgt cggcgccccg gagcttcgtc
     1201 gccttcagga tgaacgcctc gtccagggtg aagctcgcgc cgagctgctg gagggcgagg
     1261 aagtgggtgt ccacgcgccg gcggccgatg acgtcgccgc ccgggggcgg gagctccagc
     1321 tcgccgcagc gcgccagcag gggggccgcc agcaggatgg aggcgcggat cttcttgcag
     1381 cgctcgggat cgagctgctt cgcgctcagc gacttggcgt ggatggtgag cgtgttccgg
     1441 ctggtccact ccgcgctcgc gcccaccgac ttgaggagct cgacgagggt ctcgacgtcc
     1501 ttgatgcggg ggacgttctc gaggtagacc ggctcctcgc agagcagcgc ggcggcgacg
     1561 atggggaggg cggcgttctt gttgcccgag ggacggatcc ggccggagag gcgatggccc
     1621 ccctcgacga cgaactgcaa tgcgttcatg cggcggcgtg cgatgagacg ggccgtggcg
     1681 gaggcgccgg aggccaagga agatccggga aacatccccg ggttgcgcgc gagcgtcaag
     1741 gcacgcgtcg aggagcgcac tgcacccttc gcgccgcgtg aggcgggcgc cgggcgggac
     1801 tcatcgccgg gcaaccgatc gcgcggactg cttgacaccc ccgccccgcg cccgatacga
     1861 tgcccgggcc gccgacggtt ggccccgccc ttgcacgagg cgaccgcggc ggctccacgc
     1921 cgggggctcg aggcctcgcg agcggccttc tcatcccgtt caggttgccg atgaccgtct
     1981 cgttcgcgcg cgcaggcgcg tggttgctgg tgcaggcagg acagttgccg cagcacgccg
     2041 ataccgtcct gatgcgccag gtcgggaacg accgcggctg gttcgagacg gcgacggcga
     2101 tcgccagcgg gctgatgtcg gtcgccctgc tggtgctgac ggtggccctc gtgccggccg
     2161 cgtggaactt ccggaagagc tacgccaagg tcagtgatct gctggaccgg gtctacgggg
     2221 acatcaaccc gttgatgcgg cacgcgagcg caatcgccga caacgtgaac tacgtcacga
     2281 cgtcgatccg cacggacgtg cagcaggtga acgccacgat cgccgccgcc aaccagcggc
     2341 tgcagcaggc gatggcgctc acggagcagc ggttgaacga gttcaacgcg ctgctcgagg
     2401 tagtgcagga cgaggccgag tcgatgttcg tcgcaacggc gtcgacggtg cgcggggtgc
     2461 gcacgggcgc tgcggcgctt caccatgaag acgacgagga ggacgccgac cgcgcgtcgc
     2521 tcccgacgtc agaggagctc gaagatggct acgacgattc cgatgcgccc gaagcgggga
     2581 ccacgcgtcc gcgagtccgc ccccggcggc gggactgggc gtgacgccca gtacgacctg
     2641 ctcaccgccg cgctcatcgg cgccgccatc ggcgccacgg cgaccctcat gctgcggcgc
     2701 ggtccctcgg gacagcggcc ggtggcaccc gtgctccgcg gcgccaagtg ggcggggcgc
     2761 gaagccctcg ccgccggcac ggccggtgcg ggctgggccc ggtcgcgcgg cggcgagctg
     2821 ctcgatcgca ttcccaccga cgagatcgaa gagagcgtcc gcgagacggt cagcgaagcg
     2881 cgcgaccgga tcgacgggtt cgtgcgctcg gagctcaccg acctgcggaa ggctctccga
     2941 cgccagcgca agcgcctcgg cgtctagcgt gacacgctcc gcactggcgc ggctcggcct
     3001 gctggccgcc gccgcgctgg tgctgctcgt gctgctgccg gccaccgcgc acgcctggac
     3061 cccgggcacg cacgtctttc tcggcgaagc ggtgctccgc tcgctgatcc agctgcccga
     3121 cgcggtggcc gacctgctgc gcgccttccc gtacgacttt ctctacgggt cgatcgcggc
     3181 cgacaccagc atggcgaaga agtacgtccc gacgggacgc cactgccact cgtgggc
//
LOCUS       DASSYW010000313         2096 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1145925, whole genome shotgun sequence.
ACCESSION   DASSYW010000313 DASSYW010000000
VERSION     DASSYW010000313.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2096)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2096)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2096
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1145925"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..367
                     /locus_tag="VFN38_04955"
     CDS             <1..367
                     /locus_tag="VFN38_04955"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HET9011139.1"
                     /translation="ESSACVLLVEDEPQVRAHARRLLERGGFHVLEAVDGADGLRTFE
                     ARAGDIDAVVTDVVMPVLGGVEMVGRMRAHAPELPVVFVSGFTAEDRDLPLDARTVFV
                     PKPYTLVSLRLAIEAVVAR"
     gene            429..1205
                     /locus_tag="VFN38_04960"
     CDS             429..1205
                     /locus_tag="VFN38_04960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011140.1"
                     /translation="MSCPPEEPGGMRADEPDDEADHPADESDEASDEEEEDETEGEAP
                     VPRGPFTRDNPLTFIVPEPLLLRIERVDRPGAAPGEQPVAFTRAGPREVLLAVNAYPS
                     QLVDAFFASDAFGEPVIVVGAAWEEDGGVRGELSTLLPERTMRAIQESVSPEEEDEED
                     KEEPWAASASLTGTSYEEVVGSDDEDEEDDDAEEEGEGDDEDAEPHFPLVIGAVLRFP
                     ENRKFPQDFELEVDDLMRAILEGRAMDAGEKRIDNLLGGI"
     gene            1305..1565
                     /locus_tag="VFN38_04965"
     CDS             1305..1565
                     /locus_tag="VFN38_04965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011141.1"
                     /translation="MSWSVDANGHVFPANGGAADEEYPHVVVDRGGTEWAVREVETPQ
                     PWARAARCLVLNSRECVRRIWRYPSNWRKLDADALLRLGIAD"
     gene            1641..1877
                     /locus_tag="VFN38_04970"
     CDS             1641..1877
                     /locus_tag="VFN38_04970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011142.1"
                     /translation="MRKFLKFVLIAGLVCFIGLPVAFVLFVMVMALLGITIGIGSAIL
                     ALIFTVLKVALMIVLPIALIVWVARRLMAPERTY"
BASE COUNT          320 a          686 c          744 g          346 t
ORIGIN      
        1 ggaatcctcg gcctgcgtgc tgctcgtgga ggatgagccg caggtgcggg cgcacgcccg
       61 tcgtctgctc gagcggggcg gcttccacgt gctggaggcg gtcgacggag cggacgggct
      121 gcggacgttc gaggcgcgcg ccggggacat cgacgccgtc gtcaccgacg tcgtcatgcc
      181 ggtgctcggc ggtgtcgaga tggtgggccg aatgcgcgcg cacgcaccgg agctgccggt
      241 cgtcttcgtc tcggggttca cggcggagga tcgcgatctc cccctcgatg cgcgcacggt
      301 gttcgttccc aagccgtaca cgctggtgtc acttcgcctg gcgatcgagg cggtagtcgc
      361 ccgttgagcg acatgctcgg ctcgtttccc gctgcagcgg cagcgatgga agagaggtaa
      421 attccggcat gagctgtcca cccgaggagc ccggcggaat gcgcgccgac gagcccgacg
      481 acgaggctga tcaccccgcc gacgagtcgg acgaggcgag cgacgaggaa gaagaggacg
      541 agaccgaggg ggaggctccg gtcccgcgcg ggccgttcac gcgcgacaat ccgctcacct
      601 tcatcgtgcc cgagcccctg ctgctgcgca tcgaacgcgt agatcggccg ggcgcggcgc
      661 ccggcgagca gcctgtggcg ttcacccggg cgggaccgcg cgaggtgctg ctcgccgtga
      721 acgcctatcc ctcgcagctc gtcgatgcct tcttcgccag cgacgccttt ggcgagccgg
      781 tgatcgtggt cggcgcggcg tgggaagagg acggcggcgt tcgtggagag ctgtccacgc
      841 tgcttcccga gcggacgatg cgcgccattc aggagagcgt ctcccccgag gaggaagacg
      901 aggaggacaa ggaggagcct tgggccgcgt ccgcttccct caccggcacc tcctatgagg
      961 aagtggtcgg cagcgacgac gaggacgagg aggacgacga cgcggaagag gagggtgagg
     1021 gcgacgacga ggacgccgag ccccattttc cgctcgtgat cggcgcggtc ctgcgctttc
     1081 ccgagaatcg gaagttcccg caggatttcg agctggaagt cgacgacctc atgcgtgcca
     1141 tcctcgaggg tcgcgcgatg gatgccggcg agaagcgcat cgacaacttg ctcggcggca
     1201 tctgatgccc gcggcacgaa gcttccacta ggaaacggac gattagcctg gcgagtcggc
     1261 ccgcgttcgc cgccgccctc accagcacag ccgtaggtga tctggtgtcc tggagtgtcg
     1321 atgcgaacgg ccacgtcttt ccagccaatg gcggcgcggc cgacgaggaa tatccccacg
     1381 tggtcgtgga ccgtggtgga acggagtggg cggtgcgcga ggtggagacg ccccagccgt
     1441 gggcgcgcgc agcgcgctgt ctcgtgctga attcacgcga atgcgtccgt cgcatctggc
     1501 gctatccgtc caactggcga aagctcgacg ccgacgcgct gctccggctc ggcatcgcgg
     1561 actgaggacg cggcgcgcat cgccgaaacc ggtgcgtccg ctcgcgcgta gggagcgtcg
     1621 gacgcctacc ggagccactc atgcgcaagt ttctcaagtt cgtcctcatc gccggcctcg
     1681 tgtgcttcat cgggctcccg gtggcgttcg tgctgttcgt gatggtcatg gcgctgctcg
     1741 gcatcacgat cggcatcggg tcggcgatcc tggcgctgat cttcacggtg ctcaaggtcg
     1801 cgctcatgat cgtgctgccc atcgcgctca tcgtctgggt cgccaggcga ctgatggcgc
     1861 cggagcggac gtactgacgc cgcggctccc cgtcagcccg accgtctgcc tggcgcgatt
     1921 gatccagtga tcggctgacg acgacgcacg ctgtcccccc accgccgatc ggcggttggg
     1981 ggcggtgtta tgttccatta catggacacc catacatccc gtcgcgatgg cgccctgccc
     2041 gtctcgccgg ggctcgccga ggaggagtcg tacctccccg agctcgagac accccc
//
LOCUS       DASSYW010000314         2225 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1643397, whole genome shotgun sequence.
ACCESSION   DASSYW010000314 DASSYW010000000
VERSION     DASSYW010000314.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2225)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2225)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2225
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1643397"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(59..1639)
                     /locus_tag="VFN38_04975"
     CDS             complement(59..1639)
                     /locus_tag="VFN38_04975"
                     /inference="COORDINATES: protein motif:HMM:NF014675.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="family 10 glycosylhydrolase"
                     /protein_id="HET9011143.1"
                     /translation="MLLLRRLALTMALVPLALLPAAACGQVPATARIDTDSAPPRVPR
                     EFRAVWVATVDNMDWPSKKGLSTAQQQAELITILDKLVALRMNAIVLQVRPAADALYQ
                     SSLEPWSDVITGEMGRAPEPFYDPLAFATAESHKRGLEMHVWINPYRAKYSARTPASA
                     SHISRTHPDVVYQYGPYLWMDPGSAFVRARTTSVVLDLVRRYDIDAVHMDDYFYPYPE
                     TRRGREIDFPDERTYRRYRMGGGTLAKDDWRRENVNQLVKQLNDSIHAVKPWVRFGVS
                     PFGIWRPGFPASVRGFDQYAKLYADARKWFNEGWVDYFTPQLYWAIDRPEQSYPVLLE
                     WWAQQNLKGRHLWPGNYTGKVGFTNSSAWRSEEILEQIRLTRAQPGATGNVHFDMKVF
                     LDDPDQLNERLASSVYAAPALVPASPWLGRGAPAAPAVTLRADTASGFWVLDVAPVAG
                     SNGSGVGADVTGAREPWLWVVQARTDAGWTTRIVPAAERLLVLGPRTGAVPRDVRVTA
                     VDRVGNAGPMSRVTAPAP"
     gene            complement(1663..>2225)
                     /locus_tag="VFN38_04980"
     CDS             complement(1663..>2225)
                     /locus_tag="VFN38_04980"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HET9011144.1"
                     /translation="SRWQAPIFALTARLVAQKGLDLILGDPGYFAFDAQYVFLGHGEA
                     RYEAMLTELAERAPSRIAVKLDFTDEFEHLLLAGADLCLMPSQYEPCGLTQMRAQRYG
                     TIPVARRVGGLADTIEDGVTGFLFDDYTPADFMRAAMRAVDQYRETDAWEEMMREAMS
                     RDFRWERCAARYLTVYRRVLMQAPVR"
BASE COUNT          345 a          775 c          769 g          336 t
ORIGIN      
        1 cgagtcgacc tgacggcgat ccgctccgac gcgcgcgggt ccgcgctcga cggaggaatc
       61 agggtgccgg tgccgtcacc ctgctcatcg gccccgcgtt ccccacccga tccaccgccg
      121 tcacgcgcac gtcgcgcggt acggcgccag tacggggccc cagcacgagc agccgctcgg
      181 cggccggcac gatgcgcgtc gtccagccgg cgtccgtgcg ggcctgcacc acccagagcc
      241 acggctcgcg tgcgccggtc acgtcggcgc cgacgccgct gccgttcgag ccggccacgg
      301 gggcgacgtc cagcacccag aacccggatg ccgtgtcggc gcgcagggtg accgccggtg
      361 cggcgggcgc gcccctgccg agccacggcg acgccggaac gagcgcgggt gccgcgtaca
      421 ccgagctcgc cagccgctcg ttcagctgat cgggatcgtc gaggaacacc ttcatgtcga
      481 aatgcacgtt gcccgtggcc ccgggctggg cgcgcgtgag ccggatctgc tccagaatct
      541 cctcgctgcg ccaggcggac gagttggtga agcccacctt gccggtgtag ttgcccggcc
      601 agaggtgacg gcccttgagg ttctgctgtg cccaccactc cagcagcacc gggtagctct
      661 gctccggacg gtcgatggcc cagtaaagct gtggcgtgaa gtagtcgacc cagccttcgt
      721 tgaaccactt ccgtgcatcg gcgtacagct tcgcgtactg atcgaatccg cgcaccgacg
      781 ccgggaagcc tggccgccag atgccgaacg ggctcacgcc gaagcgcacc cagggcttca
      841 cggcgtgaat gctgtcgttc agctgcttca cgagctggtt cacgttctcg cggcgccagt
      901 cgtccttcgc gagcgtgccc ccgcccatgc ggtagcgccg atacgtgcgc tcgtccggaa
      961 agtcgatctc ccgcccgcgc cgcgtctcgg gatagggata gaagtagtcg tccatgtgca
     1021 cggcgtcgat gtcgtagcgc cgcacgagat ccagcacgac gctcgtggtg cgcgcgcgca
     1081 cgaacgcact cccgggatcc atccacaggt acggcccgta ctggtagacc acgtcggggt
     1141 gcgtgcggct gatgtggctg gccgacgcag gagtcctggc cgaatacttg gcgcggtagg
     1201 ggttgatcca cacgtgcatc tcgagcccgc gcttgtgcga ctcggccgtc gcgaaggcga
     1261 gcgggtcgta gaacggctcg ggcgcacgtc ccatctcccc ggtgatcacg tccgaccacg
     1321 gctccagcga cgattgatac agggcgtcgg cggcggggcg cacctggagc acgatcgcgt
     1381 tcatgcggag cgccaccagc ttgtcgagga tcgtgatcag ctcggcttgc tgctgcgccg
     1441 tcgacaggcc cttcttcgac ggccagtcca tgttgtccac ggtggcgacc cagacggcgc
     1501 ggaactcgcg cggcacgcgg ggcggcgcgc tgtcggtgtc gatgcgcgcc gtcgccggta
     1561 cctggccgca ggcagccgcc ggcaggagcg cgagcggaac gagcgccatg gtgagcgcga
     1621 ggcggcggag caggagcatg atggaaggat tgatgatgga gactaccgca ccggcgcctg
     1681 catcaggacc cgacgataca ccgtcagata ccgcgccgcg cagcgctccc agcggaagtc
     1741 gcgcgacatc gcctcgcgca tcatctcctc ccacgcatcg gtctcccgat actggtcgac
     1801 cgcccgcatc gccgcgcgca tgaagtcggc gggggtgtag tcgtcgaaca ggaagccggt
     1861 gacgccgtcc tcgatcgtgt cggccaggcc gcccactcgg cgcgcgacgg gaatggtgcc
     1921 gtaccgctgc gcccgcatct gcgtgagccc gcatggctcg tactgcgacg gcatgaggca
     1981 gagatccgct cccgccagga gcagatgctc gaactcgtcc gtgaaatcca gcttcaccgc
     2041 gatgcgactc ggcgcgcgtt cggccagctc ggtcagcatg gcctcgtagc gcgcctcgcc
     2101 gtggccaagg aagacgtact gggcgtcgaa ggcgaagtag cccggatcgc cgaggatgag
     2161 gtcgagtcct ttctgggcga cgaggcgggc cgtgagcgcg aagatgggcg cctgccaccg
     2221 gctca
//
LOCUS       DASSYW010000315         2125 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_40337, whole genome shotgun sequence.
ACCESSION   DASSYW010000315 DASSYW010000000
VERSION     DASSYW010000315.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2125)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2125)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2125
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_40337"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..425)
                     /locus_tag="VFN38_04985"
     CDS             complement(<1..425)
                     /locus_tag="VFN38_04985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocation signal
                     domain-containing protein"
                     /protein_id="HET9011145.1"
                     /translation="MRRRSFLRGVGIIAAGVAIGLRPSRARAAESSLAPAFQEARRHG
                     KPFLVATIIPDPDRRAFMAACDAIRSGPPLDLAMRFALVQPYLIATPDDVPLLTPDRV
                     TIDPPSLVMLDGERPRLRKQVRLDGDSPRRVLETFLRDQV"
     gene            complement(422..1042)
                     /locus_tag="VFN38_04990"
     CDS             complement(422..1042)
                     /locus_tag="VFN38_04990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011146.1"
                     /translation="MANVATVAEQEAFLEVEDGILKGEDPDLAVRLLLADIQVTCGDE
                     AIRLLSGDRPKLAPPWLAVIDGEEPRLGEQMPLDSTRLWQDIALFLRQAVSLDPAWLD
                     QRVALAWRDQPDLVRRVRRRIEDGGLKTDLARQAPAVVVLEAMRQPYPEQKRLLEILV
                     PPRPHKRRDYGYDCGMAAVVLTPLGARFAAALTKRQPRKGEPERKA"
     gene            complement(1186..1800)
                     /locus_tag="VFN38_04995"
     CDS             complement(1186..1800)
                     /locus_tag="VFN38_04995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011147.1"
                     /translation="MSREDHATFGQARDAIEHGSDRDLAVRLILVSLCESEDDAAVRL
                     LTNEKARIGPPSLALVDGAPARLIKEAKLERGLGQFLRETVPLTAAWLGPRVAEMSRH
                     HREQVGDLRSLLAGGQLPGVLGQQFPALVVQEALRRKGAARDRLLADLVAPWNAPPPP
                     APMPKPGETIDKCGLAMNLLTPLGLRFADAFTKPAPFGGSEEDA"
     gene            complement(1800..1955)
                     /locus_tag="VFN38_05000"
     CDS             complement(1800..1955)
                     /locus_tag="VFN38_05000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011148.1"
                     /translation="MRRRVFLSGVGAAAAGMAVGLRARRARASEPSLVSFFQEARRAG
                     KPMLVVT"
BASE COUNT          333 a          802 c          702 g          288 t
ORIGIN      
        1 acctgatcgc gcaggaacgt ctccagcacg cgccggggac tgtcgccgtc cagccggact
       61 tgcttgcgca gccgcggccg ctccccgtcg agcatgacca gcgagggcgg atcgatcgtc
      121 acgcgatcgg gcgtcagcag cggaacgtcg tcgggcgtcg cgatcaagta gggctggacc
      181 agcgcgaaac gcatcgcgag atccagcggc ggcccgctgc ggatcgcgtc gcaggccgcc
      241 atgaacgcgc gccgatcggg atccggaatg atcgtcgcga cgaggaacgg ctttccatga
      301 cgacgcgcct cctggaaggc gggcgccagc gacgattccg ccgcccgcgc gcgcgacggg
      361 cgcagaccga tcgccacgcc cgccgcgatt atccccacgc cgcgcaggaa cgaccgccgc
      421 ctcatgcctt ccgctcgggc tcgcccttgc gcggctgcct cttggtgagc gcggccgcga
      481 agcgcgcgcc cagcggcgtg agcaccaccg cggccatgcc gcagtcgtag ccgtaatcgc
      541 gcctcttgtg gggccgcggt ggaaccagga tctccagcag ccgcttctgc tcgggatacg
      601 gctggcgcat cgcctccagc accacgaccg ccggcgcctg ccgggcgaga tccgtcttga
      661 gaccgccgtc ctcgattctc cggcgaaccc gccggaccag atcgggctgg tcccgccagg
      721 ccagcgcgac acgttggtcc agccaggcgg ggtcgagcga aaccgcctgg cgcagaaaca
      781 gagcgatgtc ctgccagaga cgcgtgctgt cgagcggcat ctgctcgccc agccgcggct
      841 cctcgccgtc gatgacggcc agccagggcg gcgccagctt cgggcgatcg ccggacagca
      901 gccggatcgc ctcgtcgcca caggtcacct ggatgtcggc gagcagcagc cgcaccgcca
      961 gatcgggatc ctcgcctttc aggatcccat cctctacctc caggaacgcc tcctgctccg
     1021 cgacggtggc gacgttcgcc atcatcatca gcttcccgcg cccgcgcgcg gcgtggaacg
     1081 cggtcaggaa cagcgcgcgc tccgactgac gcgcgcgcag ggcgtacaca ccgaccgccg
     1141 cgcccgcgaa ggatccggcc agtccgccca gcaacgaccg gcgcctcatg cgtcttcctc
     1201 gcttccgccg aacggcgccg gcttcgtgaa cgcgtccgcg aagcgcaggc ccagcggcgt
     1261 gagcaggttc atcgcgaggc cgcacttatc gatcgtctcg ccgggcttcg gcatcggcgc
     1321 cggcggcggc ggcgcattcc acggcgcgac cagatcggcg agcaagcggt cgcgggcggc
     1381 gcccttacgg cgcagcgcct cctgcacgac cagcgcgggg aattgctggc cgaggacgcc
     1441 ggggagttgg ccccccgcca gcaggctacg aaggtcgcca acctgttcgc ggtgatgccg
     1501 tgacatctcg gcgacgcgcg gccccagcca cgccgccgtc agcggcaccg tctcgcgcaa
     1561 gaattgtcca agaccgcgtt ccagtttcgc ctccttgatc agccgggccg gcgcgccgtc
     1621 gaccagcgcc agcgacggtg gcccgatccg ggccttctcg ttcgtcagca gacggacggc
     1681 ggcgtcgtct tcgctctcgc aaagcgagac caggatgagt cggaccgcca gatcgcgatc
     1741 cgaaccatgc tcgatcgcgt cacgcgcctg accgaatgtc gcatggtctt cccgggacat
     1801 caggtcacca ccagcatcgg cttgccggcg cggcgcgcct cctggaagaa ggacaccagc
     1861 gaaggctcgg atgcccgcgc gcggcgcgcg cgcaggccaa cggccatgcc cgccgccgcg
     1921 gccccgacgc ccgacaagaa aacacggcgt ctcatgtctt gcggtcgttt ccgccgggcc
     1981 gcgacggctt cgtgaacacg tccgcgaagc gcgcgcccag cggcgacaag acgagcgcgc
     2041 ccaggccgca gtccaccaaa tcttcacctt ttggcttcgg ttcgatcagc ctcggcacga
     2101 ggagctctcc gagcaacttc tcgcg
//
LOCUS       DASSYW010000316         3217 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_890731, whole genome shotgun sequence.
ACCESSION   DASSYW010000316 DASSYW010000000
VERSION     DASSYW010000316.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3217)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3217)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3217
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_890731"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(229..510)
                     /gene="rpmA"
                     /locus_tag="VFN38_05005"
     CDS             complement(229..510)
                     /gene="rpmA"
                     /locus_tag="VFN38_05005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001816392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HET9011149.1"
                     /translation="MAHKKGVGSSRNGRDSNPKYRGIKKFGGEKVIAGNIILRQCGTV
                     WHPGKNVGLGTDFTIYALVDGVVKFEHKSKTRQKVSVYPAVRDEATSAA"
     gene            complement(525..842)
                     /gene="rplU"
                     /locus_tag="VFN38_05010"
     CDS             complement(525..842)
                     /gene="rplU"
                     /locus_tag="VFN38_05010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HET9011150.1"
                     /translation="MSYAIIRTGGKQFRVESGKKYRFPTIVGEAGGKIEFNDVLFGND
                     GKNVLTGVPTLSGAKVTGEIVKHGLGDKIIVFKMKRRKNYARKIGHRQDFTEVRIKDI
                     TLR"
     gene            1106..1714
                     /locus_tag="VFN38_05015"
     CDS             1106..1714
                     /locus_tag="VFN38_05015"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HET9011151.1"
                     /translation="MTPPLRLVAPSGAPDSGGEKPASASEARSLVIHAARGGDVRAFA
                     ALVDMYYARCLRFALHMLANRSDAEEAVQDTFVRLYRALPSYREQDSFEPWLFRILGN
                     RCRSAGARERRHADFLEYGDVPERATTALHDGEIAWREEIELALRALPVEQREAFLMR
                     HVEGMSYEDMSLATGAGLSALKMRVKRACDALRLRLTEVDGV"
     gene            1707..2330
                     /locus_tag="VFN38_05020"
     CDS             1707..2330
                     /locus_tag="VFN38_05020"
                     /inference="COORDINATES: protein motif:HMM:NF027875.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoamylase early set domain-containing protein"
                     /protein_id="HET9011152.1"
                     /translation="MSDEHDEMIERIAARLRPLPEVDAAARARVLVAVAAERERDRER
                     TAGRRPRVLRWLGGATIAAGLAFGAFLVGRDRGVAPGATPEPATLGSASAQVVPPPAE
                     SATATLASRGSDGATALQPVQLVFHAPAAKRVSVVGDFTGWDATRAVMTRDSGSGLWS
                     VSLALPAGRHVYAFLVDDSLWVRDPRAPRAPDADFGRPGSVLLVGRP"
     gene            2327..3043
                     /locus_tag="VFN38_05025"
     CDS             2327..3043
                     /locus_tag="VFN38_05025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011153.1"
                     /translation="MIGHLAMGAWLAALAALADAAHAGAQRPAVAAGVAATADTTLDP
                     SVVREIEMARARGVPTEPLLAKVREGRLKRAPVPRIRTAVRALATRLDSARAALGPDA
                     SADELIAGADALAAGADVTAVRAVRDASPAAPVSAPLGALAQLVASGVPPARAVTMIV
                     DLMRRKATPSQVLAFGNSVEADAAGGLPAEEAARFRWREFGSAAVGDLPARDALTSSP
                     GTQQGSGTSSPSTRTPRRRP"
BASE COUNT          407 a         1130 c         1165 g          515 t
ORIGIN      
        1 cggtgcagct ccagccggag cttgccttcg tcgagcgcgc cctgcgccgc ctgtcctgcc
       61 ttgtcgaact cgcgcttcag cgtgtcccag atcgccatgg cttcctccgt gtgggccgtg
      121 cccggtcgta cgcgaaccgg aggacaaagt tgcacggggc gcgagccgaa acgcaaaggg
      181 cgcccccgcc tagcgggggc gcccttcgcc acgagcaggc tgccggagct acgccgccga
      241 ggtggcctcg tcgcggaccg ccggatagac gctgaccttc tgccgcgtct tgctcttgtg
      301 ctcgaacttc acgacgccgt cgacgagggc gtagatggtg aagtcggtgc cgaggccgac
      361 gttcttgccc gggtgccaca cggtgccgca ctggcgcagg atgatgttgc cggcgatcac
      421 cttctcaccg ccgaacttct tgatcccgcg atacttcggg ttgctgtcgc ggccgttgcg
      481 cgacgagccg acgccttttt tatgagccat atcgcgcctc tatctcagcg gagcgtgatg
      541 tctttgatgc ggacttcggt gaagtcctgc cggtgcccga tcttgcgggc gtagttcttc
      601 cggcgcttca tcttgaagac gatgatcttg tcgccgaggc cgtgcttgac gatctcgccg
      661 gtcaccttgg cgccggagag ggtcgggacg ccggtcagga cgttcttccc atcgttgccg
      721 aagaggacgt cgttgaactc gatcttcccg cccgcttcgc ccacgatggt ggggaagcga
      781 tatttcttgc ccgactcgac gcggaactgc ttgccgccgg tacggatgat tgcgtaggac
      841 ataggaatgg ctcgtgaacg tgtggcgtag agcctaagaa gttaaacggc gagggtttag
      901 ctgtcaacgg agccggggcg gcggaaatgc gccccgccct gccgccaatg tgaccggcgg
      961 ccgctcggcg cggttaggct cgtcgaaccc cctttcacta catgtcatcc ccccgctcgc
     1021 cgcgtccctc ccatcccccc ggtcgccctc gcgctcgccg cgatcggcgt ctgcagccgg
     1081 gcgcgaccga gaccgtgcag tccagatgac gccgcccctt cggctcgtcg cccccagtgg
     1141 ggcccccgac tccggcggcg agaagccggc cagcgcgtcc gaagcccgca gcctggtgat
     1201 tcacgccgcg cgcggcggcg acgtgcgcgc cttcgccgcg ctggtggaca tgtattatgc
     1261 ccgctgcctg cggttcgcgc tccacatgct cgcgaaccgg tccgacgccg aagaggcggt
     1321 acaggacacc ttcgtgagat tgtatcgggc gctgccgtcg taccgggagc aggattcgtt
     1381 cgagccctgg ctgttccgca tcctgggcaa ccggtgccgc tcggctgggg cgagggaacg
     1441 gcgtcacgcc gatttcctgg agtacggcga cgtgccggag cgggcgacca ccgccctgca
     1501 cgacggcgag attgcatggc gcgaggagat cgagctggcg ctccgggcgc tgcccgtgga
     1561 gcagcgcgag gcattcctga tgcgccacgt cgaggggatg agctacgagg acatgagcct
     1621 ggcgaccggc gccggcctgt ccgcactgaa gatgcgggtg aagcgcgcct gtgacgcgct
     1681 gcgcctccga ctcaccgagg tggacggtgt ctgacgaaca cgatgagatg atcgagcgga
     1741 tcgcggcgcg actgcgcccc cttcccgagg tggatgcggc ggcccgggcg cgcgtgctgg
     1801 tggcggtggc cgcggagcgc gagcgcgatc gagagcgcac cgcgggccgc cgcccgcggg
     1861 ttctgcgctg gttgggtggc gcaacgatcg cggccgggct ggcgttcggc gcgttcctgg
     1921 tgggccgcga ccgcggcgtg gcgcctggcg ctacccccga gccggcgacg ctcggctcgg
     1981 cgtcggcgca ggtcgtcccc ccgcccgccg agagtgccac cgcgaccctg gcgtcgcgcg
     2041 gctccgatgg ggcgaccgcc ctccagccgg tgcagctcgt gtttcacgcc ccggccgcga
     2101 agcgcgtgag cgtagtgggg gacttcaccg ggtgggatgc cacccgcgcc gtgatgacgc
     2161 gggactccgg cagcggcttg tggagcgtct cgctcgccct cccggcgggc cggcacgtct
     2221 acgccttcct ggtggacgac tcactgtggg tgcgcgatcc gcgtgcgccg cgcgcccccg
     2281 acgcggactt cgggcgtccg ggctcggtgc tgctcgtggg gcggccatga tcggacatct
     2341 cgcgatgggc gcgtggctgg ccgcgctggc ggcgctcgcc gacgccgcgc acgccggggc
     2401 ccagcggccg gccgtcgccg ccggcgtcgc ggcgacggcc gacaccacac tcgatccttc
     2461 cgtcgtgcgg gagatcgaga tggcgcgggc gaggggcgtg ccgacggagc cgctgctggc
     2521 gaaggtccgg gagggccggc tgaagcgcgc tccggtgccc cgcattcgca ccgccgtccg
     2581 ggcgctcgct acccggctcg actcggcgcg tgccgccctc ggaccggacg ccagcgccga
     2641 tgagctgatc gccggcgccg atgcgctggc cgcgggggcg gacgtcactg cggtgcgcgc
     2701 cgtgcgcgac gcgtcgcccg cggctccggt gagcgcgcct ctgggagcgc tcgcgcagct
     2761 cgtggccagc ggagtgccgc cggcgcgggc cgtcaccatg atcgtggacc tgatgcggcg
     2821 caaggcgacg ccgtcgcagg tgctcgcctt cggcaactcg gtggaggccg atgccgccgg
     2881 cggattgccg gccgaggagg ccgcgaggtt ccggtggcgc gagttcggct ccgccgccgt
     2941 gggcgacctc ccggcgcgcg acgcgctcac ctccagtcct ggcacccagc agggctcggg
     3001 gacatcttca ccgtccacca ggacgccccg acgacgacca tagcgtgcat ctcgccccac
     3061 gaacggtagc tggcggcctg ctcatcgccc tcgcgatggg caggccgctt ggcgcacagg
     3121 accgctccgt cgtggaggtc ggcgcctccg cggtgcgttt cctcgcggac agcgtggatg
     3181 ccgccggacc atatgcacag tggaccctgt tgcggga
//
LOCUS       DASSYW010000317         2430 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1793456, whole genome shotgun sequence.
ACCESSION   DASSYW010000317 DASSYW010000000
VERSION     DASSYW010000317.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2430)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2430)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2430
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1793456"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            104..325
                     /gene="rpsR"
                     /locus_tag="VFN38_05030"
     CDS             104..325
                     /gene="rpsR"
                     /locus_tag="VFN38_05030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HET9011154.1"
                     /translation="MRRPSKACPFCETRVRFVDYKDERTLGRFITDHGKILPSRLSGV
                     CARHQRQLSTAIKRARYLALIPYTRGLQG"
     gene            326..1366
                     /locus_tag="VFN38_05035"
     CDS             326..1366
                     /locus_tag="VFN38_05035"
                     /inference="COORDINATES: protein motif:HMM:NF021506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2232 domain-containing protein"
                     /protein_id="HET9011155.1"
                     /translation="MSDAAAPAPTERGWGKLLLALAAFLFLPHVPPFTALLPVEQTLL
                     LLLPALAACTLVGWWAGGRLFLAVVCVALTIRVLALGGGPGSFYNLVRGWSLLVAGGF
                     GLVCLLGVHRPFFSRALTTLSLTLVLVVAMGIKGPLTPARTGQAMQAEFARRNAAAAA
                     MFRATVAEHPEVTRLMPDSGPVLAELEQRLAETSRTGQDLFPSLLLLESLIALALAWT
                     TYHRISRTRLGAPLGPLKDFRFNDQLVWGLIAGLAIVFLPALDFIDGVGRNLLVFFGA
                     LYAIRGFGVLSWFLAPGVLAATLMVGFAMLWWPVLSVVAISGFVLLTLAAFGLGLGDT
                     WADWRRRARPTT"
     gene            1383..1826
                     /gene="rplI"
                     /locus_tag="VFN38_05040"
     CDS             1383..1826
                     /gene="rplI"
                     /locus_tag="VFN38_05040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HET9011156.1"
                     /translation="MEIILRQAIENLGHPGDVVTVKNGYARNFLLPRGCAYEATPGNL
                     TRIAAERGRLEAAENERRESASELAKRLEEVQLTFSARVGEEGKLFGSVTSADVAEQL
                     AAQGFNIERRLIDLHEPIKALGVYRVPVRLHADVKPEIRVWVIKQ"
     gene            1938..2324
                     /gene="rsfS"
                     /locus_tag="VFN38_05045"
     CDS             1938..2324
                     /gene="rsfS"
                     /locus_tag="VFN38_05045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0017148 - negative regulation of
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HET9011157.1"
                     /translation="MTAPASSRTYSSLDLAQRAAAILLDRKGNDVVLLSLKGVSDMTD
                     YFLIASGTSDTHVRALGNAVLEDLKKDTAQTAHHVEGLQQGRWVLLDYVDFVVHVFHP
                     TLRNFYQIERLWADADVIPITHDVSR"
BASE COUNT          330 a          883 c          790 g          427 t
ORIGIN      
        1 cactctcttc gagcacgaag tcggcgcgcc gccgatgacc gaagaggagc tcgccctcgc
       61 gaagaagcgt ggcgacgacg acgacgacga cgaggagtag accatgcgcc gcccatcgaa
      121 ggcttgcccg ttctgcgaga cccgcgtccg cttcgtcgat tacaaggacg agcgcacgct
      181 cggtcggttc atcaccgatc acggtaagat cctgcccagc cgcctgagcg gcgtgtgcgc
      241 gcggcatcag cgtcagctga gcaccgcgat caagcgcgcc cgctatctcg cgctgatccc
      301 ctacacccgg ggcctgcagg gctagatgtc cgacgccgcg gccccggcgc cgaccgaacg
      361 cgggtgggga aagctcctgc tcgcgctcgc ggcgttcctg ttcctcccac acgtcccacc
      421 gttcaccgcg ctgttgccgg tggagcagac gctgttgctg ctccttccgg cgctggccgc
      481 gtgcacgctt gtgggttggt gggccggggg ccggctgttc ctcgccgtcg tctgtgtcgc
      541 gctcaccatt cgcgtgctcg cgctcggcgg cggaccgggg tcgttctaca atctcgtccg
      601 cggctggagc ctgctcgtcg ccggaggctt cggcctggtc tgtctgctcg gcgtgcatcg
      661 cccgttcttc tcgcgcgccc tgacgacgct ctcgctcacc ctcgtgctcg tcgtggcgat
      721 ggggatcaag ggcccgctca ccccggcgcg aaccgggcag gccatgcaag cggagttcgc
      781 gcgccggaac gccgccgccg ccgcgatgtt ccgcgccacg gtggcggagc atccggaggt
      841 cacgcgcctg atgcccgatt cggggccggt gctggcggag ctggaacagc ggttggcgga
      901 gacttccagg acgggacagg acctgttccc atccctgctc ctgctcgagt ccctgatcgc
      961 cctggcgctc gcgtggacga cgtatcaccg gatctcgcgg acgcgccttg gcgcgccgct
     1021 cggtccgctc aaggactttc gcttcaacga ccagctcgtc tgggggttga tcgccgggct
     1081 cgccattgtc ttcctgcccg cgctcgactt catcgacggt gtcggtcgga atctgctcgt
     1141 cttcttcggt gcgctctacg ccatccgtgg cttcggcgtc ctctcctggt tccttgcgcc
     1201 gggagtgctc gccgcgacgc tgatggtcgg gttcgccatg ctctggtggc ccgtgctcag
     1261 cgtggtcgcc atctccggct tcgtgctcct cacgctcgcc gccttcgggc tcgggctggg
     1321 cgacacgtgg gccgactggc ggcgccgtgc gcgccccacc acgtaatcag aggctcatcc
     1381 caatggaaat catccttcgc caggcgatcg agaacctcgg gcatcccggg gacgtcgtca
     1441 cggtcaagaa cggctacgca cgcaacttcc tcctcccccg cggctgcgcc tacgaggcca
     1501 cgccgggcaa cctgacgcgc atcgccgccg agcgcggccg gctcgaggcg gcggagaacg
     1561 agcggcgcga gagcgcgagc gagctcgcga agcgcctcga ggaggtgcag ctcaccttct
     1621 ccgcccgcgt cggcgaagag ggcaagctgt tcggatccgt cacctcggcc gacgtcgccg
     1681 agcagctggc ggcgcagggc ttcaacatcg agcgccgcct gatcgacctg cacgagccga
     1741 tcaaggcgct gggcgtgtat cgcgtgccgg tccgcctgca cgccgacgtg aagcccgaga
     1801 tccgcgtctg ggtcatcaag cagtgatcgg tgtacggagg agcggatgag cgacaccgca
     1861 ggtccgttgc gccgctcctc cgcctgctcg ctcgtccgct cgtccgtcga ccgcttcacc
     1921 gctcatccga tcagttcatg accgctcccg cgtcctcccg cacctacagc tcgctcgacc
     1981 tcgcccagcg tgccgccgcg atcctcctcg atcgcaaggg caacgacgtc gtgctcctga
     2041 gcctcaaggg cgtgtcggac atgacggact acttcctgat cgcgagcggc acctcggaca
     2101 cgcacgtccg cgcgctgggc aatgccgtgc tcgaggacct caagaaggac acggcgcaga
     2161 ccgcccacca cgtcgagggg ctgcagcagg ggcgctgggt gctgctcgac tacgtcgact
     2221 tcgtcgtgca cgtgttccat ccgacgctgc gcaacttcta tcagatcgag cggctgtggg
     2281 cggacgccga cgtgatcccg atcacccacg acgtctcgcg ctgacgcgct ccccgcgcgc
     2341 ctactctctc ccgtcgccgg aggatacctt ttgtccgtgc gatcgacgct gctcgcgttg
     2401 gtgctcgtgc tcgccgcctg caagggggac
//
LOCUS       DASSYW010000318         2374 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_261356, whole genome shotgun sequence.
ACCESSION   DASSYW010000318 DASSYW010000000
VERSION     DASSYW010000318.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2374)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2374)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2374
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_261356"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..603
                     /locus_tag="VFN38_05050"
     CDS             <1..603
                     /locus_tag="VFN38_05050"
                     /inference="COORDINATES: protein motif:HMM:NF025679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4382 domain-containing protein"
                     /protein_id="HET9011158.1"
                     /translation="ATLVLALTTVGAVGACSDSTGQQTGTLKVQLTDAPFSSDSVSRV
                     DVFVVRVDTRQELVDDAVVATGVDASATSTGWTTVAEPNRKIELLALRNGITTDLGLK
                     TLPVGSYQSFRLIIDPSQSSVTLKNGTVLTSTSSPSVSFPSAARSGIKINLDKPIVLA
                     ADDTTTTLVDFDVDHSFVMRGATIAQSGLNFTPVVRATVK"
     gene            755..1840
                     /locus_tag="VFN38_05055"
     CDS             755..1840
                     /locus_tag="VFN38_05055"
                     /inference="COORDINATES: protein motif:HMM:NF013044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0044237 - cellular metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HET9011159.1"
                     /translation="MALVFPFDPNIARASTIPARLYNDPVYLELERERVFAHTWQLVG
                     RREQVAEHGQFLTATVGDDAIVVLRDHDTLRAFHNVCLHRAGPVAQGCGKRNTLQCRY
                     HGWTYGLDGALIRAPEMQGVERFDPAEMHLVPVQVATWGPLVFANLDGKAPPLLDVLE
                     DVPVRVAPFRCEEMRYVMRKEWEIACNWKVYVDNYLEGYHLPVVHPGLHKELDYDQYR
                     VEPHRYFSIQHAPLRAVHGGNPDRRYDPAKTDVAEAVYVWLFPNVMLNVYMGQMQTNV
                     VIPLGHDRCRVVFEWYATNPPDDPAGDAEWTKLLAFSDEIQDEDIEICEVVQRNLRSR
                     VYDRGRYSAARENGVHHFHSLLHEFLT"
     gene            complement(1869..>2374)
                     /locus_tag="VFN38_05060"
     CDS             complement(1869..>2374)
                     /locus_tag="VFN38_05060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011160.1"
                     /translation="VTDAMVAVSNPGAFAVARRAERAGSRSRLGDEDIAGRRIYVFMD
                     PAYSPYRWGYTPYGYGYGYGYGYGYGYGYSPLGYGGYGYGSGYYGYPGYVAPIVVVSP
                     QPALPRGQAVKGRGYTRQDPGTATPAPSSSSGSSSSTGTSSSGSSSSQPASSQPAPAP
                     RTAHPRP"
BASE COUNT          362 a          879 c          778 g          355 t
ORIGIN      
        1 gctactctcg tcctcgccct cacgaccgtc ggcgccgtcg gcgcctgctc cgattccacc
       61 ggccagcaga ccgggaccct gaaggtgcag ctcaccgacg ctcccttctc ctccgactcc
      121 gtgagccgcg tcgacgtctt cgtcgtgcgc gtggacaccc ggcaggagct cgtggacgac
      181 gccgtcgtgg ctaccggcgt ggacgccagc gcgacgtcga ccggctggac cacggtcgcc
      241 gagccgaatc ggaagatcga gctgctggcg ctccgcaacg gcatcaccac cgatctcggt
      301 ctcaagacgc tgcccgtcgg cagctaccag tcgttccgcc tgatcatcga tccgtcgcag
      361 tcgagcgtca cgctcaagaa cggcacggtg ctgacgtcca cctcgtcgcc gagcgtgtcg
      421 ttcccgagcg ccgcgcgcag cggcatcaag atcaacctgg acaagccgat cgtcctcgcg
      481 gccgacgaca ccacgacgac cctcgtcgac ttcgacgtcg atcacagctt cgtgatgcgc
      541 ggcgccacga tcgcgcagag cggtctgaac ttcacccccg tcgtgcgcgc caccgtcaag
      601 tagcggaacg tcagggggtt gcacgaaggg cgccggcgcg ggatgccggc gcccttctgc
      661 gtgcggcacg gacgggggag gtgccacgcc ctcccggcgc cgcgcgtcag gcggccgccg
      721 gttgaggatc gacgcgtccg gcgtaacttg gcgcatggcc ctcgtcttcc cgttcgatcc
      781 gaacatcgcg cgcgcgtcca cgatcccggc gcggctctac aacgatccgg tctatctcga
      841 gctggagcgc gagcgggtgt tcgcgcatac ctggcagctc gtcggacgcc gcgagcaggt
      901 ggcggagcat gggcagttcc tcaccgccac cgtcggcgac gatgccatcg tcgtgctccg
      961 cgaccacgac acgctccgcg cgttccacaa cgtgtgcctg catcgcgccg gccccgtcgc
     1021 ccagggatgc gggaagcgca acaccctgca gtgccgctac cacggctgga cctacggcct
     1081 ggacggcgcc ctgatccgcg cgccggagat gcagggcgtc gagcggttcg atcccgccga
     1141 gatgcatctc gtgccggtgc aggtcgccac gtggggcccg ctcgtcttcg ccaacctcga
     1201 cggcaaggcg cccccgctgc tcgacgtgct cgaggacgtc ccggtccgcg tcgccccctt
     1261 ccgctgcgag gagatgcgct acgtgatgcg gaaggagtgg gagatcgcgt gcaactggaa
     1321 ggtgtacgtc gacaactatc tcgagggcta ccacctgccg gtcgtgcacc ccggcctgca
     1381 caaggagctc gactacgacc agtacagggt ggagccgcac cggtacttct ccatccagca
     1441 cgcgccgctg cgcgcggtgc acggcgggaa ccccgaccgg cgctacgatc cggcgaagac
     1501 cgacgtcgcg gaggcggtgt acgtctggct cttccccaac gtcatgctca acgtctacat
     1561 gggccagatg cagacgaacg tcgtgatccc cctcggccat gaccgctgcc gggtggtgtt
     1621 cgagtggtac gcgacgaacc cgcccgacga tccggcgggc gacgcggaat ggacgaagct
     1681 cctcgcgttc agcgacgaga tccaggacga ggacatcgag atctgcgagg tcgtccagcg
     1741 caacctgcgc tcgcgcgtct acgatcgcgg ccgctactcg gccgcccgcg agaacggcgt
     1801 ccaccacttc cattcgctgc tgcacgaatt cctgacctag gccacgaggg cccgggctgg
     1861 atccatccct acggtcgcgg gtgcgccgtg cgcggggcgg gcgccggctg gctggacgcc
     1921 ggctggctgc tgctcgagcc cgagctcgac gtcccggtcg agctggacga tccgctggag
     1981 ctggagggcg ccggcgtcgc cgtgccggga tcctgccgcg tgtacccgcg ccccttcacc
     2041 gcctggcccc tcggcagcgc cggctgcggg ctcacgacga cgatgggcgc cacataccct
     2101 ggatagccgt agtaccccga gccgtacccg tatccgccgt accccagcgg cgagtagccg
     2161 tagccgtagc cgtagccgta cccgtagccg tacccgtagc cgtagggcgt gtatccccac
     2221 cggtacggcg agtacgcagg atccatgaag acgtagatgc ggcggcccgc gatgtcctcg
     2281 tcccccagcc gcgaacggct ccccgcgcgc tccgcgcggc gcgccacggc gaacgcgccc
     2341 gggttcgaca ccgcgaccat cgcgtcggtc accc
//
LOCUS       DASSYW010000319         4161 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_58822, whole genome shotgun sequence.
ACCESSION   DASSYW010000319 DASSYW010000000
VERSION     DASSYW010000319.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4161)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4161)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4161
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_58822"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..775
                     /locus_tag="VFN38_05065"
     CDS             <1..775
                     /locus_tag="VFN38_05065"
                     /inference="COORDINATES: protein motif:HMM:NF013122.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HET9011161.1"
                     /translation="GRRHSADEAPELPIASEVRPAVAPAVAGPAASDPLLSLSYVVVD
                     VETTGGSPYSGHRITEIAAVVVRDGEVREVYETLVNPQRPIPPMIMKLTGITMEMVAG
                     KQPFREICPRLLEALSGHVFVAHNVNFDWRFVTAEVARASGHRLEGPKLCTVRLARKL
                     LPQLRSRSLGYVADHYGADEFARSYFEGRHGGERPWRHSAAGDAVATAHCLLRLFRDA
                     ADRGVETWGDLDALLSGGTARARKKRSALPAPVDRDSTA"
     gene            772..1653
                     /locus_tag="VFN38_05070"
     CDS             772..1653
                     /locus_tag="VFN38_05070"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HET9011162.1"
                     /translation="MSALEPLHQTRKIGRFVVHAIQAGGQKLDGGAMFGVVPKPLWER
                     RIPADERNRIQLGMRCLLIEHESGLVLLDNGAGNKEDAKFHEIYGVENDGGEGRTRLE
                     AGMRAAGFRPEDVAIVIDTHLHFDHAGGNTYRDASGAVRLSFPNARYVVQAGEYHYAT
                     HTNERTAASYFPHNFVPVAEAGRYDLVDGEREIVAGIRVLPTPGHTPHHQSVLIDGGG
                     ERACYFGDLVPTAAHLPLPWIMGYDVEPLVTLESKRTLLARAVAERWLGVFEHDATVA
                     WGRIVQERKGYAVGPEE"
     gene            1931..2419
                     /gene="infC"
                     /locus_tag="VFN38_05075"
     CDS             1931..2419
                     /gene="infC"
                     /locus_tag="VFN38_05075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HET9011163.1"
                     /translation="MNRQIRISPLRVIAPDGSQMGIMEVDAALAAAQEQGLDLVEVAP
                     LARPPVVRIMDYGKFKFEQAKQARVAKKKQHVIQLKEVKYRPGIEDHDFETKTRHARR
                     FLEEGNKVKVTLMFRGRQIAHPEIGRAVVERVGQELADVAKVESDAKMEGKSMTMILT
                     PK"
     gene            2468..2665
                     /gene="rpmI"
                     /locus_tag="VFN38_05080"
     CDS             2468..2665
                     /gene="rpmI"
                     /locus_tag="VFN38_05080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HET9011164.1"
                     /translation="MPKMKTHKGAKKRFKVTASGKVRRLKAFKSHILTKKTSKRKRNL
                     RRPTIVKTNGEAKNIKRLLQA"
     gene            2677..3222
                     /gene="rplT"
                     /locus_tag="VFN38_05085"
     CDS             2677..3222
                     /gene="rplT"
                     /locus_tag="VFN38_05085"
                     /inference="COORDINATES: protein motif:HMM:TIGR01032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HET9011165.1"
                     /translation="MPRVRSNVARLKRKNKIMKAARGAYGGRSKLWKAAKETVERGWR
                     YAYRDRKNKKRDFRRLWIMRINAAAHQHDMSYSVFINGLKKAGIEIDRKVLADIAVRD
                     PQAFAAIADQVRNALQAAAEPRSPGGALTALRTTKCEPRPMGAAVRISRLAGSTRRRR
                     SLGHRRRAALFRRRGRATIRL"
     gene            3295..>4161
                     /locus_tag="VFN38_05090"
     CDS             3295..>4161
                     /locus_tag="VFN38_05090"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HET9011166.1"
                     /translation="MTITEYLDECARLEREARDLLASLDPATRLDAAKGALNALKDER
                     LATLQGSLRTLEPADRRAAGGAFNALKTAIAEALADFERRQAPAGESGMLLDPTMPAR
                     RQWRGGRHPVTVVMEEIEQIFRELGFTIATGPEAETEWYNFRALNFPADHPAMDMHDT
                     LYLSDDVLLRTHTSPVQIRTLQRHAPPVRVLVPGNVYRRDFFDPSHAPMFAQIEGLAV
                     DEGVSFVDLKATLTRFATLFFGATKTRFRPSFFPFTEPSAEMDVQCQLCGGAGCSGCK
                     GTGWMEILGSGMV"
BASE COUNT          691 a         1360 c         1518 g          592 t
ORIGIN      
        1 ggggcgccgt cacagcgcgg acgaggcgcc ggagcttccg atcgcgtccg aggtgcggcc
       61 ggcggtcgcg ccggcggtgg ccggaccggc ggcgtccgat ccgttgctct cgctgtcgta
      121 cgtcgtggtg gacgtcgaga ccaccggggg gagtccgtat tccgggcatc ggatcaccga
      181 gatcgccgcc gtcgtcgtgc gcgacgggga ggtgcgggag gtctacgaga cgctggtgaa
      241 tccccagcgg ccgattccgc cgatgatcat gaagctgacc gggatcacga tggagatggt
      301 cgccggcaag cagccctttc gcgagatctg tccgcggctc ctcgaggcgt tgagcggtca
      361 cgtgttcgtg gcgcacaacg tgaacttcga ctggcggttc gtgaccgccg aggtggcgcg
      421 ggcgagcggg catcggctgg aggggccgaa gctctgcacg gtgcggctcg cccggaagct
      481 tctaccccag ctccgcagcc gctcgctggg ctacgtcgcc gaccattacg gggccgacga
      541 gttcgcgcgc agctacttcg aggggcggca cgggggggag cgtccctggc ggcacagcgc
      601 ggccggggac gccgtggcga ccgcgcactg tctgctgcgt ctcttccgcg acgcggccga
      661 tcgcggcgtc gagacgtggg gggatctcga cgcgttgctg agcggaggga cggcccgggc
      721 gcggaagaag cggtccgcgc tgccggcgcc ggtggaccgg gacagcaccg cgtgagcgcg
      781 ctcgagccgc tgcaccagac gcggaagatc ggccgcttcg tcgtccacgc gatccaggcc
      841 ggagggcaga agctcgatgg gggggcgatg ttcggcgtcg tcccgaagcc gctctgggag
      901 cggcgcattc ccgccgacga gcgcaatcgc atccagctcg gcatgcgttg cctgctgatc
      961 gagcacgagt cggggctggt gctgctcgac aacggggcgg ggaacaagga ggacgccaag
     1021 ttccacgaga tctacggcgt cgagaacgac ggcggggagg ggcggacgcg gctcgaggcg
     1081 gggatgcggg cggccggctt ccggcccgag gacgtcgcca tcgtcatcga cacccatctg
     1141 catttcgatc acgccggcgg caacacgtac cgcgacgcct ccggcgccgt gcggctctcc
     1201 tttcccaacg cacgatacgt ggtgcaggcg ggtgagtatc actacgcgac gcacaccaac
     1261 gagcggaccg cggcgagcta tttcccgcac aacttcgtgc ccgtcgccga ggcggggcgg
     1321 tacgatctcg tggacggtga gcgggagatc gtggccggca tccgcgtgct gccgacgccg
     1381 ggtcacacgc cgcatcacca gagcgtgctg atcgacggcg gaggtgagcg ggcatgctac
     1441 ttcggcgatc tggtgccgac cgcggcgcac ctgccactgc cctggatcat ggggtacgac
     1501 gtggagccgc tggtgacgct ggagtcgaag cggacgctgc tcgcgcgggc ggtcgccgag
     1561 cgctggctcg gggtgttcga gcacgacgcg accgtggcgt gggggcggat cgtgcaggag
     1621 cggaagggat acgccgtcgg gccggaggag tagcggccgg gcgcggcccg agggtggcgc
     1681 ccttgacgct gtatccgggg cgttctaagt tacttccaca caacacggta agcgggtccg
     1741 cgaggcggac cccaccctcc ggcccctggc gacgatgcag ggcgtgctgc aggagttcat
     1801 gagctgagcg cgccccccgc gagacggagg ggcgtgcgcg tgcgcgcgga ctcctgggag
     1861 gagtgccgcg ttttttgttt cccttcttcg aggaacacga cctattcagg acccgaccaa
     1921 gcgcgtccgc gtgaaccggc agatccgtat cagcccgctc cgcgtgatcg cgcccgatgg
     1981 cagccagatg ggcatcatgg aggtcgacgc cgcgctcgcc gccgcgcagg agcaggggct
     2041 cgacctggtc gaagtggctc cgttggcgcg cccgccggtc gtccggatca tggactacgg
     2101 caagttcaag ttcgagcagg ccaagcaggc gcgcgtcgcc aagaagaagc agcacgtgat
     2161 ccagctcaag gaagtgaagt accgtccggg catcgaggat cacgacttcg agacgaagac
     2221 gcgccatgcg cgccgcttcc tcgaggaggg gaacaaggtg aaggtgacgc tcatgttccg
     2281 cggccggcag atcgcgcacc ccgagatcgg gcgggcggtc gtggagcggg tggggcagga
     2341 gctggccgac gtcgcgaagg tcgagagcga cgcgaagatg gaagggaagt cgatgaccat
     2401 gatcctgacg ccgaagtaac gggcgccggg ccgagcatat ccagtcgaga ctcagcgaga
     2461 gcgtgcaatg ccgaagatga agacgcacaa gggtgcgaag aagcgcttca aggtgacggc
     2521 gagcggaaag gtgcgtcgcc tcaaggcctt caagagccac atcctgacca agaagacgtc
     2581 caagcggaag cgcaatctgc gccgccccac gatcgtgaag acgaacgggg aagccaagaa
     2641 catcaagcgc cttctccagg cctaaggagt cgatagatgc ctcgcgtcag atcgaacgtt
     2701 gcgcgcctga agcgcaagaa caagatcatg aaggccgccc gtggtgcgta cggcgggcgc
     2761 agcaagctgt ggaaggccgc caaggagacc gtggagcgcg gctggcgcta cgcgtaccgc
     2821 gaccgcaaga acaagaagcg cgacttccgc cgcctctgga tcatgcgcat caacgcggcc
     2881 gcacatcagc acgacatgag ctacagcgtc ttcatcaacg gcctcaagaa ggccgggatc
     2941 gagatcgacc ggaaggtgct ggccgacatc gccgtccgcg atccgcaggc gttcgccgcg
     3001 atcgccgacc aggtgcgcaa cgcgctccag gcggccgccg agccacgctc tccgggcggc
     3061 gcgctgaccg cccttcgaac cacgaaatgc gaaccgcggc cgatgggcgc cgcggttcgc
     3121 atttcgcgtt tggcaggatc caccaggcgc cgtcgctcgc tcgggcaccg gcgccgggcg
     3181 gcattgttcc gccgccgcgg ccgtgcgact attcggctgt agccgccgta gccatgccga
     3241 tcggccgcga cgacgtcatg ccgtcgctcc tctctcgctt caccgccctc cgacgtgacc
     3301 atcaccgagt atctcgacga gtgcgcccgc ctcgagcgcg aggcgcgcga cctgctcgcg
     3361 tcgctcgatc cggcgacgcg actcgacgcc gccaagggtg ccctcaacgc tctcaaggac
     3421 gagcggctgg cgacgctgca ggggtcgctg cgcacgctcg agccggcgga ccgccgcgcg
     3481 gcggggggcg ccttcaacgc cctcaagacc gcgatcgccg aggcgctggc cgacttcgag
     3541 cgccggcagg cgccggcggg cgagagcgga atgctgctcg atccgacgat gccggcccgc
     3601 cgccagtggc ggggcgggcg ccatccggtg acggtggtga tggaggagat cgagcagatc
     3661 ttccgcgagc tgggcttcac gatcgcgacc gggcccgagg cggagacgga gtggtacaac
     3721 ttccgcgcgc tgaacttccc ggccgaccat ccggcgatgg acatgcacga cacgctctat
     3781 ctgagcgacg acgtgctgct gcggacgcac acctcgcccg tgcagatccg gacgctccag
     3841 cgccacgcgc ccccggtgcg ggtgctcgtc ccgggcaacg tctaccgtcg cgacttcttc
     3901 gacccgtcgc acgccccgat gttcgcccag atcgaggggc tcgcggtgga cgagggggtg
     3961 agcttcgtgg acctcaaggc gacgctgacc cgcttcgcga cgctcttctt cggcgcgacg
     4021 aagacgcgct tccgtcccag cttcttcccg ttcaccgagc cgtcggcgga gatggacgtg
     4081 cagtgccagc tctgcggcgg cgcgggctgc tcgggctgca aggggacggg ttggatggag
     4141 atcctcggct cgggcatggt c
//
LOCUS       DASSYW010000320         2651 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_582465, whole genome shotgun sequence.
ACCESSION   DASSYW010000320 DASSYW010000000
VERSION     DASSYW010000320.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2651)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2651)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2651
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_582465"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            440..2062
                     /locus_tag="VFN38_05095"
     CDS             440..2062
                     /locus_tag="VFN38_05095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011167.1"
                     /translation="MRPTAIRCMGWLVASAVLLLAGVGGCAKDSRAATAAAAAPWKDR
                     VFTLFANLPRDASLDPWEGSLAVAPDHTVYWEGYDLFALRPGELQPRRPLPSTLPVDD
                     VGSYGVAADGALIVSTYDRLWRLVPDGMPSWIAGTGEQGLQGDGGPATAAQLCAPSSI
                     VARPDGGIVFAEAGGAMVRAIDPQGSISTLLTAEPRTTPVECGEEPRAEWIKPLAARA
                     NGHIVARVERPPAEPDPEGFLPADVVKFDRDGRRRTVAKDFFARAVADDDTMLAIDGV
                     GLRRRAPGTKGHLLMKGDPSWYFGAFFDHDGVPAQRYGFSLMVDAIFAPDGGIIASLW
                     ADDREGARLLYLPPAKPGRTALALFPNRGRASARAYRARLLLTTPATATVTVSRGSRR
                     LATRTASLTRGWHTLVARGHLPAAAATARVDVTGPGGQRAADSLRVVTGGRLPSRLAR
                     SALRRYLCQPAICTERTRLDACRRYGKSRVDCRVKTPEWCSAATARLTRSGIIHGRIY
                     ARCPSGGASPLSAQPRYERSERWEPIGPAQQH"
     gene            2306..2485
                     /locus_tag="VFN38_05100"
     CDS             2306..2485
                     /locus_tag="VFN38_05100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011168.1"
                     /translation="MTAFDRDGVAADYAAIPIELLAPKPHALSHTEAAAVPLAALSAW
                     QGLLEHGRLAAPAVA"
BASE COUNT          376 a          969 c          913 g          393 t
ORIGIN      
        1 gggagtcgcc ggctgcgatg tgtcgctcct gctgcgtggc ggtgggactg gggagccatc
       61 gttgcttggc aggagcagcc tcggtgcgtt atgcaacgcc cgaggagggg tcatgtccga
      121 gctgccgctc gacgcggccg aggcgagcct gatcagatct cggcgaccct gacgccggaa
      181 agctcctcgt ggggctcggc gaacgcaatc gcggtggctg ctcccgccgg tgatcgctcg
      241 tggatgggcg agcgtgccga gcggctggaa cggcgcctgg agtggccgat gctcgtcgcc
      301 gccgctctgg tcattccgaa cctgatcctc gaggaagcga gagtcggcgc gcgccgcacc
      361 gcagaggccg tggcggcccg aggcgcggcg tcggcgttct accgatgtat gcgcggcacg
      421 ctccacctac ggtcgcggta tgcgcccgac cgccatcagg tgcatgggct ggctagtcgc
      481 ctctgcggtg ctacttctcg ccggcgtcgg cggatgcgcg aaggacagcc gcgcggccac
      541 agcggctgcg gcggcgccgt ggaaggacag agtcttcacg ctgtttgcca acctgccgcg
      601 cgatgcctcg ctggatccct gggagggctc cttggccgtg gcgcccgatc acacggtgta
      661 ctgggaaggc tacgatctgt tcgcgttgcg accgggggag ctgcaaccgc gccggccgct
      721 gccctccacc ctcccggtcg acgatgtcgg cagctacggg gtggccgccg acggtgcgct
      781 gatcgtctcg acctatgacc ggctctggcg tctggtgccc gacggcatgc cgtcgtggat
      841 cgcgggcacc ggtgagcagg gcttgcaggg cgacggcggg cccgcgacag cggcgcagct
      901 ctgcgcgccg agctcgatcg tcgcgcgccc tgacggcggc atcgtgttcg ccgaagccgg
      961 cggcgcgatg gtccgcgcga tcgaccccca gggatcgatc tccacgttgc tcaccgctga
     1021 accccgcacc acgcccgtgg agtgcggaga ggagcccagg gccgagtgga tcaagccact
     1081 cgccgcacgc gcgaacggcc atatcgtcgc acgtgtcgag cggccccctg ccgagcctga
     1141 tcctgaaggg ttcttgccgg cggacgtcgt caagttcgac cgagacggac gccgccggac
     1201 ggtcgccaag gacttcttcg cgcgagctgt cgccgacgac gacacgatgc tcgcgatcga
     1261 cggcgtcggg ctgcggcggc gcgcacccgg aacgaagggt cacctgctca tgaaaggcga
     1321 cccgtcctgg tacttcggcg cgttcttcga tcacgacggc gtcccggctc agcgttacgg
     1381 gttctcgctc atggtggacg ccatcttcgc gcccgatggc gggatcatcg cctccctgtg
     1441 ggcggatgac cgcgaaggcg cccgactgct ctacctgccg ccggccaagc cgggacgcac
     1501 cgccttggcg ctcttcccca atcgcggccg cgcctccgcg cgcgcctacc gggcccgcct
     1561 cctcttgaca acgccggcga ccgccaccgt gaccgtctcc cgcggatcac gccgcctcgc
     1621 gacccgcaca gcgtcgctga ctcgaggctg gcacacgctc gtcgcccgtg gccaccttcc
     1681 ggccgcggcc gcgaccgccc gcgtggacgt caccggcccc ggcggtcagc gcgccgccga
     1741 ctcgctgcgc gtcgtcaccg gcggccggct gccctcacga ctggcacgca gcgcgctgcg
     1801 acgctacctg tgccagcccg ccatctgcac cgagcgcaca cgcttggatg cctgccggcg
     1861 ctacggcaag tcgcgcgtgg actgccgtgt taagaccccg gagtggtgca gcgccgccac
     1921 cgcccgcctg acccgcagcg ggatcattca cggccgcatc tacgcgcgct gtcctagcgg
     1981 cggcgcatcc ccgctctcgg cccagccgcg ctacgaacgc tccgagcgct gggagccgat
     2041 cgggccagca cagcagcact gacgccatca cgaagatcag cgtcaaccgc cctgtcccga
     2101 agtcaccagg gtccaccaaa tcaacgggct cgcgccaggc cccggggagg cgctcgtccg
     2161 cgtccacgcg gcggcgctca cgcgcgacga gctcgagtgg cccgtcgacc ggcttccggc
     2221 gatcccctct tacgagctgt ccggcgtcgt ggtcgctgtc ggggacggcg tcgacgacgt
     2281 ggccgtcggt ggtgaggtgt acggaatgac ggcattcgac cgggacgggg tcgccgccga
     2341 ctacgccgca atcccgatcg agctgctcgc gcccaagccg catgcgctta gccacaccga
     2401 ggcggctgcc gtcccactcg cggcgctcag cgcctggcaa ggattgctcg agcacggcag
     2461 gctcgccgcg ccagccgtcg cttgacggcg tgcgcggccc cgatccggga agcgagccgc
     2521 gatgatccgc tgcgtccgcg actacaccca agagcgcaag cggagatcgc caggatcatc
     2581 atgcgtgaag taagtaagcc caatcgccag gcgctgatcc agttcctgag cagaggttcg
     2641 caatcgagcc c
//
LOCUS       DASSYW010000321         2855 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_390388, whole genome shotgun sequence.
ACCESSION   DASSYW010000321 DASSYW010000000
VERSION     DASSYW010000321.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2855)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2855)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2855
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_390388"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..648)
                     /locus_tag="VFN38_05105"
     CDS             complement(<1..648)
                     /locus_tag="VFN38_05105"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HET9011169.1"
                     /translation="MESVLARPALEPTPRGDAAARREPVFVARGLVKTYHTGDVEVQA
                     LRDLDMDLYRGELLVLLGASGSGKSTLLNILGGLDTATGGQVRFEEHDLTSMNEHELT
                     QYRREHVGFVFQFYNLIPSLTARENVALVTDIARAPMPAEEALAMVGLAERMDHFPAQ
                     LSGGEQQRVAIARAVAKRPDVLLCDEPTGALDYATGKVALEVLVKINAELGTTAAV"
     gene            complement(652..918)
                     /locus_tag="VFN38_05110"
     CDS             complement(652..918)
                     /locus_tag="VFN38_05110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011170.1"
                     /translation="MRRALLTVFMLGLAGTAFSGILTYRELFGATALACPAPGAPGTI
                     FGYPACVYGFFMFVVITVVSGLGLRAAASPATPLPSGMSRASGR"
     gene            1089..1766
                     /locus_tag="VFN38_05115"
     CDS             1089..1766
                     /locus_tag="VFN38_05115"
                     /inference="COORDINATES: protein motif:HMM:NF025691.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4389 domain-containing protein"
                     /protein_id="HET9011171.1"
                     /translation="METHALRLASSALHPVRIRFVPALDGRERLTTAFRFLLALPHLV
                     LVGGPIAAVLTWNRGAEDGLTYGWGAGGGVLGVVAAVIAVIAWFAILFTGRFPKGLWD
                     LAAYYLRWRVRVMAYAALLRDEYPPFGDGMYPVELELPRPDEPRDRLTVAFRPLLAIP
                     HLVAIWVLGLAWALATILASFSNLFAGRYPVQLYRFAVGVMRWTTRVEAYVLLLRDEY
                     PPFTLTG"
     gene            1913..2311
                     /locus_tag="VFN38_05120"
     CDS             1913..2311
                     /locus_tag="VFN38_05120"
                     /inference="COORDINATES: protein motif:HMM:TIGR00738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HET9011172.1"
                     /translation="MLSCTADYALRAILLIARAGSGRPLRADEIAAATGAPPNYLAKT
                     LNALAKAGLLTSARGPKGGFALATPATSLTIAQVVDCFDEPRPQRRCMLGAAPCDPTH
                     PCAAHVRWTAITAARRSPLATTTVAELLAG"
     gene            2344..>2855
                     /locus_tag="VFN38_05125"
     CDS             2344..>2855
                     /locus_tag="VFN38_05125"
                     /inference="COORDINATES: protein motif:HMM:NF019352.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HET9011173.1"
                     /translation="MPTAHPLAARHPVLRTALIILLTILGVLVLAAITGYGPLGGARA
                     GVALHQPSDELIGQEIAVPTAPPAVPAPITRTHATKVIVNLDVVEQPMSIADSVTYPM
                     WTFGGTVPGRFIRVREGDLVELHLKNAANSTMPHNIDLHAVTGPGGGAKASLTLPGQE
                     SVFTFSAMNPG"
BASE COUNT          410 a         1107 c          894 g          444 t
ORIGIN      
        1 gaccgcggcg gtcgtgccga gctcggcgtt gatcttcacg agaacttcaa gcgcgacctt
       61 gcccgtcgcg taatcgagcg cgccggtggg ctcgtcgcac agcagcacgt cgggtcgctt
      121 ggccaccgcg cgtgcgatcg cgacgcgctg ctgctcgccc cccgagagct gcgccgggaa
      181 gtgatccatc cgctccgcca gccccaccat cgcgagcgcc tcctccgccg gcatcggcgc
      241 ccgcgcgatg tcggtcacga gggccacgtt ctcgcgcgcc gtcaggctcg ggatcaggtt
      301 gtagaactgg aacacgaagc cgacgtgctc gcgccggtac tgtgtgagct cgtgctcgtt
      361 catgctcgtc aggtcgtgct cctcgaaccg cacctgcccg ccggtcgcgg tatcgagtcc
      421 gccgagaatg ttgagcagcg tcgacttgcc gctccccgag gcgccgagca gcacgagcag
      481 ctcgccgcga tacaggtcca tgtcgaggtc gcgcagcgcc tgcacctcga cgtcgcccgt
      541 gtggtacgtc ttcaccagtc cgcgcgcgac gaacaccggc tcgcgacgcg cggcggcatc
      601 accccgtggt gtcggctcga gggcgggacg cgccagcacc gactccatgt gtcaccgccc
      661 cgatgcgcgg ctcatgcccg agggcagcgg cgtcgccgga ctcgcggccg ctcggagacc
      721 gagcccgctc accacggtga tcacgacgaa catgaagaag ccgtagacgc aggccggata
      781 gccgaagatc gtccccggtg cgcccggcgc cggacaggcg agtgccgtcg cgccgaacag
      841 ctcgcggtac gtgaggattc cggaaaaagc cgtcccggca aggccgagca tgaacacggt
      901 caatagcgcg cgacgcatgc gacgctcctg gctagtcaat gctgcaacct cgtcagccgg
      961 gtgccgtgtt gctgtcaggc aaagcgtgtc agtcgtgtcg ggcgtccacc atcacccgac
     1021 agcggccgag ggccgaagcg cgcaagctga agcgtcgtac tatcccggcc cgtcactgga
     1081 gcgtccccat ggaaactcac gccctccggc tcgcgtcctc cgcgctgcat cccgtgcgca
     1141 ttcgcttcgt ccccgcgctc gacggacgcg agcgtctcac gaccgcattt cgattcctcc
     1201 tcgctctgcc gcacctggtg ctcgtcggcg ggccgatcgc cgccgtgctg acgtggaacc
     1261 gcggcgcgga ggacgggctc acctacggat ggggcgccgg cggcggcgtg ctcggcgtcg
     1321 tggcggccgt gatcgccgtg atcgcctggt tcgcgatcct cttcaccggc cggtttccca
     1381 aggggctctg ggatctcgcc gcctactacc tgcgctggcg cgtgcgggtc atggcctacg
     1441 cggcgctgct gcgcgacgag tatcccccat tcggtgacgg gatgtatccg gtggagctcg
     1501 agttgccccg gccggacgag ccacgcgacc ggctcaccgt cgcgtttcgt cccctgctcg
     1561 ccatcccgca cctcgtcgcc atctgggtcc tcggcctcgc gtgggcgctg gcgaccatcc
     1621 tcgcgtcgtt cagcaacctc ttcgcgggac gctatccggt tcagctgtac cggttcgccg
     1681 tgggggtcat gcgctggacc acgcgcgtcg aggcgtacgt gctcctgctg cgcgacgaat
     1741 atccgccctt caccctcacg ggatgagggc cggcgcgccc tgtcgggaga atccccaccg
     1801 gccacggcga aacgccccac gcaggtctcg gcgtgctccc gactgatggc cctcgtcgaa
     1861 acgacgattc tcatatcgag atgagaaact cgttttccga ccaggtcccg ccatgctgag
     1921 ctgcaccgcc gactacgccc tccgcgccat cctcctcatc gcccgcgccg gcagcggacg
     1981 tccgctccgc gccgacgaga tcgccgccgc caccggagcg ccgcccaact acctcgcgaa
     2041 gacgctgaac gcgctcgcca aggccggact gctcaccagc gctcgggggc cgaagggcgg
     2101 atttgccctc gccaccccgg ccacctcgct caccatcgca caggtcgtcg actgcttcga
     2161 cgagccgcgc ccgcagcgcc gctgcatgct cggcgccgcg ccgtgcgatc ccacgcatcc
     2221 gtgcgcggcg cacgtccgct ggaccgccat caccgctgcc cgtcgttccc cgctcgcgac
     2281 cacgacggtc gccgagctgc tcgctggctg acgctaccca ctcgccactc cctggagccg
     2341 accatgccca ccgctcaccc gctcgccgcc agacatcccg tgctgcgcac cgcgctgatc
     2401 atcctgctca ccatcctcgg cgtgctcgtt ctcgccgcca tcaccggcta cggcccgctc
     2461 ggcggggcgc gcgccggcgt cgccctgcac cagccctccg acgagctcat cggacaggag
     2521 atcgccgtgc cgacggcgcc ccccgccgtt cccgcgccga tcacccgcac gcacgccacg
     2581 aaggtcatcg tcaatctgga cgtcgtggag cagccgatgt ccatcgccga cagcgtcacc
     2641 tatccgatgt ggaccttcgg cggcaccgtc cccggccggt tcatccgcgt ccgcgagggc
     2701 gacctcgtgg agctccacct gaagaacgcg gcgaacagca cgatgcccca caacatcgac
     2761 ctgcacgccg tcacgggccc gggcggcggc gcgaaggctt cgctcaccct ccccggtcag
     2821 gagtcggtgt tcaccttctc ggccatgaac cccgg
//
LOCUS       DASSYW010000322         2534 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_508437, whole genome shotgun sequence.
ACCESSION   DASSYW010000322 DASSYW010000000
VERSION     DASSYW010000322.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2534)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2534)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2534
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_508437"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..829)
                     /locus_tag="VFN38_05130"
     CDS             complement(<1..829)
                     /locus_tag="VFN38_05130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011174.1"
                     /translation="MSSSSISSVSPVSVLRGTASLHRRVLLAVGLGGAIATGLLAWGA
                     SLAIDDVVARQGDIRVTDAARRGLLIVDGALAERVRQAELVAASPEVVAAARAGGARA
                     RALGIVDAPVAGLEERFGTDRSLAVDPSTRYYLRSMLPRLGAAEILLTDANGYNAVTT
                     GLSSDFVQSDEGWWQTAWRNDISSAEAVFDSSARQTVVSLAAVVRADTVPVGVVKLAF
                     SMGPLVHALGEAGAGIRIDVVDAADRVVLSSDSKTLGTAAKGIVPASLGTVATVSGAD
                     "
     gene            999..>2534
                     /gene="leuS"
                     /locus_tag="VFN38_05135"
     CDS             999..>2534
                     /gene="leuS"
                     /locus_tag="VFN38_05135"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004823 - leucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006429 - leucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HET9011175.1"
                     /translation="MTEPAVNLPAGDEPAGYDPAAIERKWRARWEADGTNVTDLQRGP
                     RPFYALMMFPYPSAEGLHVGNLFAFTGNDIYGRFQRLQGHTVFEPFGYDAFGIHSENY
                     AIKVGIHPAELIPRNIDNFRRQVKRAGLMVDWTHELSTTDPSYYRWTQWVFLQLYKQG
                     LAYKKKAAVNWCPFDKTVLANEQVVGGACERCGTMVEQRLLEQWFFRITDYAGRLLPN
                     LDTLDWSESTKSAQRNWIGKSEGAEITFPVLDHTVYGTSTAVGGTTGEVVASAPSVQV
                     FTTRPDTIFGATYLVLAPEHPLVEAVATDAERAAVREYVRAASKQDLVSRKTSKAKSG
                     VFTGAFATNPATGRPIPIWIADYVLMEYGTGAIMAVPGHDERDHEFARAYDLPIVQVV
                     APADGEVDIRAEAYTGTEGTRLVNSGPFSGLGVAEGTAAIVGELGAKGAAVPVVNYRL
                     HDWCISRQRYWGPPIPIVYCDACGTVPVPESQLPVLLPQIDDFRPDDSGVSPLARHDE
                     WYHT"
BASE COUNT          405 a          887 c          908 g          334 t
ORIGIN      
        1 catcggcgcc actcaccgtg gcgaccgtgc cgaggctcgc cgggacgatc cccttggcgg
       61 cggtgccgag cgtcttggaa tcggagctga gcacgacccg gtcggccgcg tccaccacgt
      121 cgatcctgat gccggcgccg gcctcgccga gggcgtggac gagcggtccc atggagaagg
      181 ccagcttcac cacgcccacc ggcacggtgt cggcccgcac gaccgccgcc agggagacga
      241 ctgtctgccg cgccgacgag tcgaagacgg cctccgcgct ggagatgtcg ttccgccagg
      301 ccgtctgcca ccacccctcg tcgctctgca cgaagtccga gctgagaccg gtggtgacgg
      361 cgttgtagcc gttggcgtcg gtgagcagga tctcggccgc gcccagccgg gggagcatgg
      421 atcggaggta gtaccgcgtc gacgggtcca ccgcgagcga gcggtcggtg ccgaagcgct
      481 cctcgagccc ggccaccggc gcgtccacga tgccgagggc gcgcgctcgc gcgccgccgg
      541 cccgggcggc cgcgacgacc tcgggcgagg cggccacgag ctcggcctgc cgcacccgtt
      601 cggccagcgc gccgtcgacg atcagcaggc cgcggcgcgc cgcgtcggtg acgcggatgt
      661 caccctggcg ggcgacgaca tcgtcgatcg ccaggctggc cccccacgcg agcagcccgg
      721 tggcgatcgc cccgcccagc ccgaccgcga gcaggacacg gcgatgcagg gaagccgtgc
      781 cccggaggac ggacaccggc gaaacgctgg agatggagga ggacgacatg cgcgcgagag
      841 cccgaagaaa cgtgactggc ggggcgcggg gcggccgcgc gacggcgcgc gtgcttgaat
      901 gcccctccca ccaggctaaa ttctgatcag cgacccactt tgcttgcagg cgccagcgtc
      961 gccctgcccg aggtccgagc gccgagccgc cagcccccat gacagaaccc gctgtgaacc
     1021 tgcccgccgg cgacgaaccg gccggctacg atcctgccgc catcgaacgg aagtggcgcg
     1081 cgcgctggga ggcggacggc accaacgtca ccgacctcca gcgcggccca cggccgttct
     1141 acgcgttgat gatgttcccg tacccgagcg cggaggggct ccatgtgggc aacctgttcg
     1201 cgttcaccgg gaacgacatc tatggacgat tccagcgtct ccaggggcac accgtcttcg
     1261 agccgttcgg ctacgacgcg ttcgggatcc actcggagaa ctacgccatc aaggtgggaa
     1321 tccaccccgc cgagctgata ccaaggaaca tcgacaactt ccggcgccag gttaagcgcg
     1381 ccggcctgat ggtcgactgg acccacgagc tctcgaccac cgatccgtcg tattaccggt
     1441 ggacgcagtg ggtcttcctg cagctctaca agcaggggct ggcgtacaag aagaaggcgg
     1501 cggtgaactg gtgcccgttc gacaagaccg tgctcgccaa cgagcaggtg gtcgggggcg
     1561 cctgcgagcg ctgcgggacg atggtggagc agcgcctcct ggagcagtgg ttcttccgca
     1621 tcaccgacta cgccggccgg ctgctcccca acctcgacac gctcgactgg tcggagagca
     1681 cgaagagcgc gcagcgcaac tggatcggga agagcgaggg ggcggagatc accttccccg
     1741 ttctggacca cacggtgtac ggcacctcca ccgcggtggg ggggacgacg ggggaggtgg
     1801 tggcgtcggc gccctccgtg caggtgttca cgacgcgacc cgacaccatc ttcggcgcga
     1861 cgtacctcgt gctggcgccg gagcaccccc tggtcgaggc ggtcgccacc gacgcggagc
     1921 gtgcggcggt gcgggagtac gtgcgggccg cgtcgaagca ggacctcgtg agccgcaaga
     1981 cgagcaaggc gaagagcggg gtgttcacgg gggcgttcgc caccaatccc gccaccgggc
     2041 ggccgatccc gatctggatc gccgactacg tgctgatgga gtacggcacc ggcgcgatca
     2101 tggccgttcc cggccacgac gagcgcgatc acgagttcgc ccgcgcgtac gacctgccga
     2161 tcgtgcaggt ggtggcgccg gccgatggcg aggtggacat ccgcgccgag gcgtacaccg
     2221 ggacggaggg gacgcgcctc gtgaactcgg gaccgttctc cggcctcggc gtggcggagg
     2281 gcacggcggc gatcgtgggc gagctcggcg cgaagggggc ggcggtgccg gtggtgaact
     2341 accggctgca cgactggtgc atctcgcgcc agcgctactg gggtccgccc atccccatcg
     2401 tctactgcga cgcgtgcggc accgtccccg tcccggagtc gcagctgccg gtgctgctgc
     2461 cgcagatcga cgacttccgc cccgacgact cgggggtgag ccctctcgcg cgccacgacg
     2521 aatggtacca cacg
//
LOCUS       DASSYW010000323         5086 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_252813, whole genome shotgun sequence.
ACCESSION   DASSYW010000323 DASSYW010000000
VERSION     DASSYW010000323.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 5086)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5086)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5086
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_252813"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..647)
                     /gene="prmC"
                     /locus_tag="VFN38_05140"
     CDS             complement(<1..647)
                     /gene="prmC"
                     /locus_tag="VFN38_05140"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: protein motif:HMM:TIGR00536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0018364 - peptidyl-glutamine methylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HET9011176.1"
                     /translation="MKLRDALGRARDKLIGVGIAPDEAAIDVELFARTILGWDRARLL
                     TESNQVTPAGLEPKFSAWVDRRSTREPSAYITGVREFYSLDFEVTPAVLIPRPETEII
                     VEAALPLIVRKLDARVADIGTGCGNIAVTLAHEARKCTVVATDISADAVNVAKRNAAR
                     HGVFNRIEFVATKYLEGVSGDFDLIAANPPYVREIDKPGLSPTVLHEPHVALFGGA"
     gene            complement(644..1720)
                     /gene="prfA"
                     /locus_tag="VFN38_05145"
     CDS             complement(644..1720)
                     /gene="prfA"
                     /locus_tag="VFN38_05145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003202249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016149 - translation release factor
                     activity, codon specific [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HET9011177.1"
                     /translation="MFDKLAAVERHYEELMTRLGTVELQSDAAEYKKAAKALAELEPL
                     VQKYREYKTVEADLAGTTELAKGSDADMRALAEEELPALREKRDALVEELKILLIPKD
                     PNDEKNVILEIRAGTGGDEAGLFAADLFRMYSRYAERQGWRLEIMSESVGDAGGITNV
                     VAMIEGKRVYSRLKYESGVHRVQRVPATEASGRIHTSTATVAVLPEAEDVDIQIHEKD
                     LRIDTFCSSGPGGQSVNTTYSAVRLTHLPTGVVVSQQDEKSQIKNRAKAMKVLRARLY
                     DMEMQKQQDAISKDRRSQVGSGDRSEKIRTYNFPQSRITDHRINFTTHQLHDVLEGDV
                     AELLDQVASFYNAEKLKQASQGEA"
     gene            complement(1724..1969)
                     /locus_tag="VFN38_05150"
     CDS             complement(1724..1969)
                     /locus_tag="VFN38_05150"
                     /inference="COORDINATES: protein motif:HMM:NF014636.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoaD/ThiS family protein"
                     /protein_id="HET9011178.1"
                     /translation="MRVTVRLFARLKDLAGAGELVRDVPSPATIEQVWRSLVKDMPAL
                     GDYERTMSVALNTDYSRMTAAVKDGDEVAFLPPVSGG"
     gene            complement(1960..2442)
                     /locus_tag="VFN38_05155"
     CDS             complement(1960..2442)
                     /locus_tag="VFN38_05155"
                     /inference="COORDINATES: protein motif:HMM:NF014448.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein MoaE"
                     /protein_id="HET9011179.1"
                     /translation="MSTPLVAVTKDPLSLDALTAVVADAAGADGAVTSFLGLVRQDNL
                     GRKVAFLEYEAYEPLAVKGLQRIVDEVKANWPSAKLGVHHRIGRLALGEASIVIVAAS
                     PHRADAFSACRYTIERVKQIVPIWKHEHFDGGDVWLEGATADPDDETARRTAYRIACA
                     "
     gene            complement(2491..3417)
                     /locus_tag="VFN38_05160"
     CDS             complement(2491..3417)
                     /locus_tag="VFN38_05160"
                     /inference="COORDINATES: protein motif:HMM:NF016142.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine-5'-phosphate glycosidase"
                     /protein_id="HET9011180.1"
                     /translation="MGRELTVSTAVADALRSNLPVVALESTLITHGLPWPHNMETALA
                     MEHAVRAAGAVPATIAVLGGDITVGISAADIERLASRPFASVRKCSRRDLPIAVARRE
                     DASTTVAGTMIVAHQAGIRVFGTGGIGGVHRGAPFDVSADLIELGRTPVAVVCAGAKS
                     ILDLPATLEVLETQGVPIVGLGTDTLPGFYARSTGLPIDVRVETPEEAAAIVDAAHRL
                     DAQHAVLIVVPVPEEAAFPAADAEAAIQQATREAEAQGIHGKAVTPFLLQRVSELTGG
                     GTRAANTALLVNSARHAGLIARALAGSPRPEA"
     gene            complement(3449..4237)
                     /gene="thiD"
                     /locus_tag="VFN38_05165"
     CDS             complement(3449..4237)
                     /gene="thiD"
                     /locus_tag="VFN38_05165"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: protein motif:HMM:NF020132.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008902 - hydroxymethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0008972 - phosphomethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HET9011181.1"
                     /translation="MATHPAIVALTIAGSDSGGGAGIQADLKTFAAFGVYGVTAITAV
                     TAQNTRGVSAVETLSPGIVAAQIAAIVDDFQIAALKTGMLANSAIIGAVARVLRVSRV
                     GPLVVDPVMVAKSGDRLLDADALEALTRDLLPLAAVVTPNLPEAEVLTGIAVRTVEDQ
                     RAAARRIVGLGARTAVVKGGHADAAEIVDVFFDGAAFTEFRAERVPGTSTHGTGCTFS
                     AAIAAQLAVGRSVLEAIPAAQAYVAKAIQNAPGLGHGHGPMGHL"
     gene            complement(4207..4827)
                     /locus_tag="VFN38_05170"
     CDS             complement(4207..4827)
                     /locus_tag="VFN38_05170"
                     /inference="COORDINATES: protein motif:HMM:NF014669.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin transporter BioY"
                     /protein_id="HET9011182.1"
                     /translation="MIATRSATLVEAIATRSDAATSFVTRAVAVLFFAALTAAAAQIS
                     VPLPFTQVPFTFQPTVVLLSGLVLGPRLGLASQVVYLAAGIAGFPVFAASVTLPPGVG
                     RLLGPTGGYLMSYPLAAFVAGAFSRRGFDRRYLTSIVAMALGLVVIYTCGTLWLAYAA
                     VGRTAAGLATAFATGVAPFVIADVVKLAAAAGIVPGLWRLIPPSSR"
     gene            complement(4901..>5086)
                     /locus_tag="VFN38_05175"
     CDS             complement(4901..>5086)
                     /locus_tag="VFN38_05175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011183.1"
                     /translation="GLKANGRIGVVNFKLGGGGPGPDDPSLRVPRASVERDAAAAGLK
                     VKSVGNLPYQYLIVLGR"
BASE COUNT          753 a         1779 c         1738 g          816 t
ORIGIN      
        1 gcgccgccaa agagcgcgac gtgcggctcg tgcagcaccg tgggcgacag cccgggcttg
       61 tcgatctcgc gcacgtaggg aggattggcc gcgatcaggt cgaagtcgcc ggacacgcct
      121 tccaggtatt tggtcgcgac gaattcgatg cggttgaaca cgccgtgccg cgcggcgttt
      181 cgcttggcga cgttcaccgc gtccgccgag atgtcggtgg cgaccacggt gcacttgcgc
      241 gcctcgtgcg ccagcgtcac ggcgatgttg ccgcagccgg tgccgatgtc ggccacgcgc
      301 gcgtcgagct tgcggacgat gagcggcagc gcggcctcga cgatgatctc cgtctcgggc
      361 cgcgggatga gcaccgccgg tgtcacctcg aaatccaggc tgtagaactc gcggacgccg
      421 gtgatgtagg cgctcggctc gcgggtgctg cggcggtcca cccacgccga gaacttcggc
      481 tcgaggccgg cgggggtgac ctgattcgat tcggtgagga ggcgcgcgcg atcccagccc
      541 aggatcgtcc tcgcgaagag ctcgacgtcg atcgccgcct cgtccggcgc gatgcccacg
      601 ccgatcagtt tgtcgcgcgc gcgccccagt gcgtcgcgaa gcttcacgcc tcgccctggc
      661 tggcctgttt gagcttttcc gcgttgtaga acgacgccac ctgatcgagc agttcggcca
      721 cgtcgccctc gagcacgtcg tgcagctggt gggtcgtgaa attgatgcga tggtcggtga
      781 tgcggctctg cgggaagttg taggtgcgga tcttctcgga gcgatcgccg gagccgacct
      841 ggctgcgccg atccttcgag atggcgtcct gctgcttctg catctccatg tcgtagagac
      901 gcgcgcgcag caccttcatc gccttcgcgc ggttcttgat ctgcgacttc tcgtcctgct
      961 gcgacaccac gacgccggtc gggaggtgcg tgaggcgcac cgcggagtac gtcgtattga
     1021 cgctctggcc gcccgggccg ctcgagcaga acgtgtcgat gcgcaggtcc ttctcgtgga
     1081 tctggatgtc cacgtcttcg gcttcgggca gcaccgcgac ggtggcggtg gatgtgtgga
     1141 tgcgcccgct ggcctcggtg gccggcacgc gctgcacacg gtgcacgccg ctctcgtact
     1201 tcaagcggct gtagacccgc ttgccctcga tcatcgcgac gacgttcgtg atcccgccgg
     1261 cgtcgccgac gctctcggac atgatctcga gccgccagcc ctggcgctcg gcgtagcgcg
     1321 agtacatgcg gaacaggtcc gcggcaaaga gccccgcctc gtcgccgccc gtgccggcgc
     1381 ggatttcgag gatgacgttc ttctcgtcgt tcgggtcctt cgggatgagc aggatcttca
     1441 gctcttcgac cagcgcatcg cgcttctcgc gcagcgccgg cagctcctct tcggcgagcg
     1501 cgcgcatgtc ggcgtcgctg cccttggcga gctcggtggt gccggcgagg tccgcttcga
     1561 cagtcttgta ttcgcggtac ttctgcacga gcggttcgag ctcggcgagc gccttggcgg
     1621 ccttcttgta ctcggcggcg tccgactgca gttccaccgt gccgagccgc gtcatcagct
     1681 cttcgtagtg cctctccact gccgccagct tgtcaaacat gtctcatccg cccgacacgg
     1741 gcggcaggaa tgccacctcg tcgccgtcct tcaccgccgc cgtcatccgc gagtagtccg
     1801 tgttcagcgc caccgacatc gtgcgctcgt agtcgccgag cgccggcatg tccttcacga
     1861 gcgaccgcca gacctgctcg atcgtcgccg gggagggcac gtcccggacc agttcgcctg
     1921 cgcccgccag atctttgaga cgcgcgaaca gccgcacggt tacgcgcatg cgatgcgata
     1981 cgccgtccgg cgggccgttt cgtcgtccgg atccgccgtg gcgccctcca accacacgtc
     2041 gccgccgtcg aagtgctcgt gcttccagat cggcacgatc tgcttcaccc gctcgatcgt
     2101 gtatcggcac gccgagaagg cgtccgcacg atggggcgac gctgccacga tgacgatgct
     2161 cgcctcgccc agcgccagcc tgccgatgcg gtggtgcacg cccagcttgg ccgacggcca
     2221 gttggccttc acctcgtcca cgatccgctg cagccctttg accgcaagtg gttcataggc
     2281 ctcgtattcc aggaacgcga ccttccggcc gaggttgtcc tggcgcacca ggcccaggaa
     2341 cgacgtgacg gccccgtcgg cccccgcggc gtcggccacg acagccgtca gggcgtcgag
     2401 gctcagcggg tccttggtca cggccaccag cggtgtggac atccagatca gtatagaacc
     2461 cgggaggctt caggcttcgg gcttcgggct tcaggcttct ggcctcgggc ttccggccag
     2521 ggctcgggcg atcaggccgg cgtggcgcgc gctgttgacg agcaaggcgg tgttcgccgc
     2581 gcgggtcccg ccgccggtca gctcggacac gcgctgaagg agaaacggcg tcaccgcctt
     2641 gccgtgaatg ccctgtgcct ccgcctcgcg cgtggcctgc tgaatggcgg cttccgcgtc
     2701 ggcggcgggg aaggcggcct cctcggggac cggcacgacg atgagcaccg cgtgctgcgc
     2761 atcaagccgg tgcgcggcgt ccacgatcgc cgcggcttct tccggcgtct ccacgcgcac
     2821 gtcgatcggt agtccggtcg atctcgcgta gaaacccggc agcgtgtcgg tcccgaggcc
     2881 gacgatcggc acgccctgcg tctcgagcac ttccagcgtg gcgggcagat cgagaatcga
     2941 cttcgcgccc gcgcagacga cagccaccgg cgtgcgaccg agctcgatca gatcggcgga
     3001 cacgtcgaac ggcgcaccgc ggtgcacgcc accgatgccg ccggtgccga acacgcgaat
     3061 gccggcctgg tgggcgacga tcatcgtgcc ggccacggtg gttgacgcat cctcgcgccg
     3121 cgccaccgca atcggcagat cgcggcggct gcacttccgc acgctggcga acgggcgcga
     3181 ggcgagccgc tcgatgtcag cggcggaaat gccgacggtg atgtcgccac cgagcacggc
     3241 aatcgtggcc ggcacggcgc ccgccgcgcg cacggcgtgt tccatcgcca gcgcggtctc
     3301 catgttgtgc ggccacggca ggccgtgcgt gatgagcgtg gattcgaggg cgacgaccgg
     3361 aaggttcgac cgaagcgcgt ccgcaaccgc ggtcgatacg gtgagctctc tgcccactct
     3421 gcctactccg cccactccgc ctccagggtc acagatggcc catgggaccg tggccatggc
     3481 cgaggccggg cgcgttctga atcgccttgg ccacgtaagc ctgggccgcg gggatcgcct
     3541 cgaggacgct gcggcccacc gcgagctggg cggcgatcgc ggccgagaag gtgcaaccgg
     3601 tgccgtgtgt gctggtgcca ggcacccgct ccgcacggaa ctccgtgaac gcggcaccat
     3661 cgaagaacac gtccacgatt tcggcggcgt ccgcatgccc gcccttgacg acggctgtgc
     3721 gtgcgcccag tccgacgatg cggcgcgccg ccgcgcgctg atcctcgacg gtccggacgg
     3781 cgatcccggt cagcacttcg gcttccggca ggtttggcgt gacgaccgcg gcgagcggca
     3841 gcagatcgcg agtgagtgct tcgagcgcat ccgcatccag cagacggtcg ccgctcttgg
     3901 ccaccatgac ggggtcgacg acgagcggcc ccacgcgcga cacgcgcagt acgcgcgcca
     3961 ccgcgccgat gatcgcgctg ttcgcgagca tcccggtctt gagcgcggct atctggaagt
     4021 cgtccacgat cgcggcgatc tgcgcggcca cgatgccggg ggagagcgtt tcgaccgccg
     4081 acacgccgcg cgtgttctgt gcggtcacgg cggtgatggc ggtcacgcca tacacgccga
     4141 acgcggcgaa ggttttcaga tcggcctgga tgccggcgcc accgccggag tcgcttccgg
     4201 cgatcgtcag cgcgacgatg gcgggatgag tcgccacagg cccggaacga tgccggccgc
     4261 ggccgcgagc ttcacgacgt cggcaatcac gaacggcgcg acgccggtgg cgaaggcggt
     4321 cgccagaccg gcggccgtgc ggcccaccgc cgcgtacgcc agccacagcg tgccgcaggt
     4381 gtagatgacg acgagcccga gcgccatcgc gacgatcgac gtgaggtaac ggcgatcgaa
     4441 tccgcgccgt gagaacgcgc cggccacgaa cgcggccagc ggatacgaca tgagatagcc
     4501 acccgtcggg ccgagcagac gcccgacacc gggaggcagc gtgaccgacg cggcaaacac
     4561 cgggaacccc gcgatgcccg cggcgaggta gaccacctgg ctcgccagcc cgaggcgcgg
     4621 gccgagcacg agcccgctca gcagcacgac cgtgggctgg aacgtgaacg gcacctgcgt
     4681 gaacgggagc ggcacgctga tctgcgccgc ggcggccgtg agcgccgcaa agaagagcac
     4741 cgccacggcg cgcgtcacga acgacgtggc cgcgtcgctc cgggtcgcaa tcgcctctac
     4801 cagcgtggcc gatcgagtcg caatcatgag tgaaattcta ccgcgttcgc cgctgcaggc
     4861 ctgccgccgc gcgtagctgc aggcctttca ggcctgccaa tcaacgtccc aggacaatca
     4921 ggtactggta ggggagattt ccgacagatt tgaccttcaa cccggccgcg gcggcgtcgc
     4981 gctccaccga cgcccgcggt acgcgcaggc tggggtcgtc gggaccgggt ccgcccccgc
     5041 cgagtttgaa gttcacgacg ccgatgcggc cgttcgcctt cagccc
//
LOCUS       DASSYW010000324         3367 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1738045, whole genome shotgun sequence.
ACCESSION   DASSYW010000324 DASSYW010000000
VERSION     DASSYW010000324.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3367)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3367)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3367
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1738045"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(155..1330)
                     /locus_tag="VFN38_05180"
     CDS             complement(155..1330)
                     /locus_tag="VFN38_05180"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF019845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004024 - alcohol dehydrogenase activity,
                     zinc-dependent [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0030554 - adenyl nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent alcohol dehydrogenase"
                     /protein_id="HET9011184.1"
                     /translation="MRAVTWQGTRKMSVDTVPDPEIVQQSDVVVKVTATAICGSDLHL
                     YNHFVTTMQKGDILGHEFMGEVVEVGRDVKRLKKGDRVVVPFPISCGRCYYCKQGIFA
                     ACDNSNPNGEISEALYGAQAGAAAYGFSHMYGGYAGGQAEYVRVPYADVGPLKVPDGV
                     SDEQVLFLSDILPTGWQAAKRGEIKPGDTVAVWGCGPVGYFTIQSAYLQGARRVIAID
                     RFPERLALARDVGKAEVINYEETDDLIELLKQMTGGRGPDVCIDAVGLEAHGHDLVSK
                     ADKVKQTLRLEMDRPTAVRQTIQAAAKGGRVSIIGVYGGVIDKFPLGAFFTKGLKMAA
                     GQCDVQQFMPDLLQRVLNGEIDTTSLISHRLTLEDAPGAYKMFCNKEDGCTKVVMKP"
     gene            complement(1341..2186)
                     /locus_tag="VFN38_05185"
     CDS             complement(1341..2186)
                     /locus_tag="VFN38_05185"
                     /inference="COORDINATES: protein motif:HMM:NF022072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HET9011185.1"
                     /translation="MAPATAAPRRMKSSGPRFDGARREAMQFDRAAHNVATPERVGSV
                     ALGAALVTYGVRRRDPAGAIAAILGSAFVLRGATGHCPVYRAMGISTGDVDAILGPSH
                     SDVTGRAATVNARRAVKIERAVTIEGDRRALFDFWRDFENLPRFMEHLESVRVESPTR
                     SHWVAKAPAGTVVEWDAEIINEIAGSLIAWKSTGHAEVPNAGSVHFTDAPGDRGTIVK
                     VVMDVEPPAGKLGFVMARLFGEDPDRQVREDLRKFKQLMETGEITTSARRRADSAYDG
                     ATPTK"
     gene            complement(2234..3346)
                     /locus_tag="VFN38_05190"
     CDS             complement(2234..3346)
                     /locus_tag="VFN38_05190"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HET9011186.1"
                     /translation="MLELVGRRDASADAPRHVAPDVAYLRDRIVNVCFVGAPGAADRE
                     WALVDAGLPGSADRITHAAARLFGAASRPAAILLTHGHADHVGAVRTLMRRWDAPVYA
                     HEMELPYLTGRSSYPPADPFVGGGAMSVLSVLFPRAPIHLGSHVHALPADGSVPGMRG
                     WRWIPTPGHSPGHVSFVRDVDRTLIAGDAFVTTKNESLIAALTQRAELHGPPMYLTPD
                     WDAARVSLRHLAAYSPSAAITGHGPPMRGEPLQSALRQLASQFDARARPAHGRYRDRP
                     AIMSASGVVDVPPAQMGPGAMVVTGLAIGAAIGVGVVLGRRGGARAAAFAPSAADDVS
                     LAQGAELAAADGGYDVTTATVPTLPVAVPPTSIELR"
BASE COUNT          485 a         1239 c         1142 g          501 t
ORIGIN      
        1 cggcggcggc gcgtggctcc gcgcggacgg cggcgcgcag ccgttcgact tccgccgaca
       61 gtgccgccac ctgtcgctcg agcgccgcga ggcggtcgtc gtcggggctc atcgcacgaa
      121 gttacccccc acgccgacga ccgccagccg agcgctacgg cttcatcacc accttggtgc
      181 agccgtcctc cttgttgcag aacatcttgt acgcgccggg cgcgtcctcg agcgtgaggc
      241 ggtggctgat gagcgacgtg gtgtcgatct cgccgttgag cacgcgctgc agcaggtcgg
      301 gcatgaactg ctgcacgtcg cactgccccg ccgccatctt caaccccttc gtgaagaagg
      361 cgccgagcgg gaacttgtcg atcacgccgc cgtacacgcc gatgatgctc acgcgtccgc
      421 ccttggccgc cgcctggatc gtctggcgca ccgcggtcgg gcgatccatc tcgagacgga
      481 gcgtctgctt caccttgtcg gccttgctca cgagatcgtg gccgtgcgcc tcgagcccca
      541 ccgcgtcgat gcagacgtcg ggaccgcggc cccccgtcat ctgcttgagc agctcgatca
      601 gatcgtccgt ctcttcgtag ttgatcacct cggccttgcc cacgtcgcgc gcgagcgcga
      661 gccgctcggg gaaccggtcg atcgcgatca cgcgcctggc cccttgcagg tacgcgctct
      721 ggatcgtgaa gtagccgacg ggaccgcacc cccacacggc gacggtgtcg cccggcttga
      781 tctcgccgcg cttggccgcc tgccagcccg tcgggaggat gtccgacagg aagagcacct
      841 gctcgtcgct cacgccgtcc ggcaccttga gcggtcccac gtcggcgtag ggcacgcgca
      901 cgtactcggc ctggccgccg gcatagccgc cgtacatgtg cgagaagccg taggcggcgg
      961 cccccgcctg cgcgccgtac agcgcctcgg agatctcgcc gttcggattg gagttgtcgc
     1021 acgccgcgaa gatgccctgc ttgcagtagt agcagcgccc gcacgagatc gggaacggca
     1081 ccaccacgcg gtcgcccttc ttcaggcgct tcacgtcgcg acccacctcg accacctcgc
     1141 ccatgaactc gtgaccgagg atgtcgccct tctgcatcgt ggtcacgaaa tgattgtaca
     1201 ggtgcaggtc ggagccgcag atcgccgtcg cggtcacctt caccaccacg tcgctctgct
     1261 gcacgatctc cggatcgggg accgtgtcca cgctcatctt ccgcgtgccc tgccaggtga
     1321 cggctcgcat gcctgtcccc ctacttcgtc ggcgtggcgc cgtcgtacgc ggaatccgcg
     1381 cggcgccgtg cggaggtcgt gatctccccg gtctccatga gctgcttgaa cttgcgcagg
     1441 tcctcgcgca cctggcgatc cggatcttcc ccgaacagcc tggccatcac gaagcccagc
     1501 ttccctgccg gaggctcgac gtccatcacc accttcacga tcgtgccgcg atcgcccggc
     1561 gcgtcggtga agtgcacgga accggcgttc ggcacctcgg cgtggcccgt gctcttccac
     1621 gcgatgaggc tgccggcgat ctcgttgatg atctccgcgt cccattccac gaccgtgccc
     1681 gcgggcgcct tggccaccca gtgcgaccgc gtcggcgact ccacgcgcac ggactcgaga
     1741 tgctccatga agcgcggcag gttctcgaaa tcgcgccaga aatcgaagag cgcgcgccgg
     1801 tccccctcga tcgtcacggc gcgctcgatc ttgaccgcgc gccgggcatt cacggtggcg
     1861 gcgcggcccg tcacgtcgct gtgcgaggga ccgaggatgg cgtccacgtc gccggtgctg
     1921 atgcccatgg cgcgatacac gggacagtgc cccgtggcgc cgcgcaggac gaaggcgctg
     1981 ccgaggatcg ccgcgatcgc gccggcggga tcgcgccggc gcacaccgta cgtgacgagt
     2041 gcggcgccga gcgcgacgga tccgacgcgc tccggcgtcg cgacgttgtg tgccgcgcga
     2101 tcgaactgca tcgcctcccg gcgagcgccg tcgaagcgcg ggccgctcga tttcatgcgg
     2161 cgcggtgccg ctgttgcagg tgccatgtga agctccgtgt ggaattgcga agacagaagg
     2221 acgggtcgcg agctcagcgc agctcgatgg aggttggcgg cacggccacg ggaagggtcg
     2281 gcacggtcgc cgtggtgacg tcgtagccgc cgtccgccgc cgcgagctcg gcaccctgcg
     2341 ccagcgacac gtcgtccgcc gccgacggcg cgaacgccgc tgcgcgcgca ccgccccgac
     2401 gcccgagcac gacacccact ccgatcgccg cgccgatggc cagtcccgtc acgaccatcg
     2461 cgcccgggcc catctgcgcc ggcggcacgt ccaccacgcc gctcgcgctc atgatcgcgg
     2521 gccgatcgcg atagcggccg tgcgccggac gcgcgcgcgc gtcgaactgc gacgcgagct
     2581 gccggagcgc ggactgcagc ggctcgccgc gcatcggggg gccgtggccg gtgatcgcgg
     2641 cgctcgggga ataggccgcg aggtgccgca gcgacacgcg cgcggcatcc cagtcggggg
     2701 tgaggtacat cggcggaccg tgcagctccg cgcgctgcgt caacgccgcg atcagcgact
     2761 cgttcttcgt cgtgacgaac gcgtcgccgg cgatgagcgt gcgatcgacg tcacgcacga
     2821 acgagacgtg ccccggcgaa tggcccggcg tggggatcca gcgccagccg cgcatccccg
     2881 gcacgctgcc gtcggcgggc agggcgtgca cgtgcgaccc cagatggatc ggcgcgcgcg
     2941 gaaagagcac cgacagcacg ctcatcgcgc cgccgcccac gaagggatcg gccggcggat
     3001 acgacgagcg tccggtcaga tacggcagct ccatctcgtg cgcgtacacc ggcgcatccc
     3061 atcggcgcat cagcgtgcgg acggcaccga cgtgatccgc atgtccgtgc gtgagcagga
     3121 tcgccgccgg ccgcgacgcc gcgccgaaca ggcgagcggc cgcgtgcgtg atcctgtcgg
     3181 ccgagcctgg cagtcccgcg tcgaccagtg cccattcgcg gtccgcggcg cccggcgcgc
     3241 cgacgaagca cacgttgacg atccggtcgc ggagataggc gacgtcgggg gcgacgtggc
     3301 gcggcgcgtc ggcactcgcg tcgcgacgac caaccagctc cagcatgtat cggcgccctc
     3361 aggtgag
//
LOCUS       DASSYW010000325         2213 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1035258, whole genome shotgun sequence.
ACCESSION   DASSYW010000325 DASSYW010000000
VERSION     DASSYW010000325.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2213)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2213)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2213
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1035258"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..993
                     /locus_tag="VFN38_05195"
     CDS             <1..993
                     /locus_tag="VFN38_05195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HET9011187.1"
                     /translation="LDDLVQRLMDEGYLNVDAPPQMPDSHQPVTGPGGLARAASRDVQ
                     FNLTEKGIDFLGYKTLRGILGSLGKSSFGSHDTPYLATGIEADGYTKPYEFGDVLNLD
                     VNETLKNSLARTGKIEVPMDLDYGDLAVRQAEYRSSCATVLMLDTSHSMILYGEDRFT
                     PAKKVALALTHLIRTQFPGDTIRVVLFHDSAEEIPLATLAHAQVGPYHTNTAEGLKLA
                     RRILTAQKKDMRQIVMITDGKPSALTMPNGQIYKNSMGLDATVIAQTLREVANCRRSG
                     IMINTFMLARDRALVEFVKRVSEISKGKAYFTNTMTLGQFILMDFLRKKTRKVS"
     gene            complement(1004..>2213)
                     /locus_tag="VFN38_05200"
     CDS             complement(1004..>2213)
                     /locus_tag="VFN38_05200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011188.1"
                     /translation="DGWAAAMLAAAMLALLYDGEGEVPGWRGAALAGVLLGGCVLVKP
                     TYGAFLLAALAHLWWARGAGRRRLASAAVLLGAFALPAAACVAWFASRGVLGDVIEVY
                     VRYPLRVYAVVDSPWLWRLQGSAEFLLLRQFAIPLPLAIVGWSALRRTNRPAARLLLA
                     WALLAIANVAVQGRFWAYHWLPFYPPLALLTGLGVMAAARALLPPRGDRGGKGIAATP
                     AAAQVLAAVVGVVALSAAFVPLQVVYRWAKGSTSAERRSRYEAREYGADGRQGASMRA
                     VAAYVGGRTSPGERVLFWAQHPGYYYLAGRRPPGRFGFPLPLLQAPASAAGAAYRAQF
                     LASLEATRPAFIVVPAAADCVPAATDRQACLASFPALAAVVAGSYVHDSTFAVDADSA
                     VLHYEVLRRR"
BASE COUNT          374 a          858 c          726 g          255 t
ORIGIN      
        1 ctcgacgacc tcgtgcagcg cctgatggac gagggctacc tgaacgtcga cgcgccgccg
       61 cagatgcccg actcgcacca gccggtgacc ggccccggcg ggctcgctcg cgccgcgtcg
      121 cgcgacgtcc agttcaacct caccgagaag gggatcgact tcctcggcta caagacgctc
      181 cgcggcatcc tcggatcgtt gggcaagtcg agcttcgggt cgcacgacac gccctatctt
      241 gccaccggca tcgaggccga cggctacacc aagccgtacg agttcggcga cgtcctcaac
      301 ctcgacgtca acgagaccct caagaactcc ctcgcccgca ccgggaagat cgaagtcccg
      361 atggatctcg actatggcga cctcgccgtc cgccaggccg agtaccggtc gtcgtgcgcc
      421 accgtgctga tgctcgacac ctcgcactcg atgatcctct acggcgagga ccgcttcacg
      481 ccggccaaga aggtcgccct cgccctcacg cacctcatcc gcacccagtt tcccggcgac
      541 acgatccgcg tcgtcctctt ccacgactcc gccgaggaga tcccgctcgc cacgctcgcc
      601 cacgcgcagg tcggcccgta tcacacgaac accgccgagg ggctcaagct cgcccgccgc
      661 atcctcaccg cccagaagaa ggacatgcgg cagatcgtga tgatcaccga cggcaagccg
      721 agcgcgctca cgatgccgaa cgggcagatc tacaagaact cgatgggcct cgacgcgacc
      781 gtcatcgcgc agaccctgcg cgaggtcgcc aactgccgcc gctcggggat catgatcaac
      841 accttcatgc tcgcccgcga ccgcgcgctc gtcgagttcg tgaagcgcgt cagcgagatc
      901 tcgaagggga aggcgtactt caccaacacg atgacgctcg gccagttcat cctcatggac
      961 ttcctgcgca agaagacgcg caaggtgtcc tgagccggcc gcgtcagcgc cgccgcagca
     1021 cctcgtagtg gaggacggcg ctgtcggcgt ccaccgcgaa cgtgctgtcg tgcacgtagc
     1081 ttccggccac gacggcggcg agcgcgggga acgacgccag gcacgcctgc cggtcggtcg
     1141 ccgcggggac gcagtcggcc gccgccggca ccacgatgaa cgccggccgc gtcgcctcga
     1201 gcgacgccag gaactgggcg cggtaggccg cgccggccgc tgacgccggc gcctggagca
     1261 gcggaagggg aaagccgaag cgtcccggcg ggcgtcgccc ggccaggtag tagtagccgg
     1321 gatgctgcgc ccagaagagc acccgctcgc ccggcgaggt gcgcccgccg acgtacgccg
     1381 ccacggcgcg catcgaggcg ccctgccggc cgtcggcgcc gtattcccgc gcctcgtatc
     1441 tcgaccgccg ctcggcgctc gtgctcccct tcgcccagcg atagaccacc tgcagcggga
     1501 cgaaggccgc cgacagggcg acgacgccca ccaccgcggc cagcacctgc gccgcggccg
     1561 gcgtcgcggc tatccccttc cctccccggt cgccgcgcgg cggcagcagc gcccgcgccg
     1621 cggccatcac cccgagtccg gtgaggagcg cgaggggggg ataaaagggg agccagtggt
     1681 aggcccagaa tcgcccctgc acggcgacgt tcgcgatcgc cagcagggcc caggcgagga
     1741 gcagccgcgc cgccggacgg ttcgtccgcc gcagcgcgct ccagccgacg atcgccagcg
     1801 ggagggggat cgcgaactgc cgcagcagca ggaactcggc gcttccctgc agccgccaga
     1861 gccacggaga gtccaccacg gcgtacaccc gcagcggata gcggacgtag acctcgatca
     1921 cgtcgccgag cacgccgcgc gaggcgaacc aggcgacgca cgccgccgcc ggcagcgcga
     1981 acgccccgag cagcacggcc gccgaggcca gccgtcgtcg tcccgctccg cgcgcccacc
     2041 agagatgggc cagggcggcg agcaggaagg cgccgtaggt cggcttgacg agcacgcagc
     2101 cgccgagcag gacgccggcg agggccgcgc cccgccagcc gggcacttcc ccctccccgt
     2161 cgtacagcag ggccagcatc gccgcggcga gcatcgccgc cgcccagccg tcg
//
LOCUS       DASSYW010000326         2082 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1495808, whole genome shotgun sequence.
ACCESSION   DASSYW010000326 DASSYW010000000
VERSION     DASSYW010000326.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2082)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2082)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2082
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1495808"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..361)
                     /locus_tag="VFN38_05205"
     CDS             complement(<1..361)
                     /locus_tag="VFN38_05205"
                     /inference="COORDINATES: protein motif:HMM:NF003995.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-sensing transcriptional repressor Rex"
                     /protein_id="HET9011189.1"
                     /translation="MKKENKRVPAARNAGDAISELTTNRLSVYLRCLTVLDAAGVRTV
                     SSRALAEQFHLNAAQIRKDLAYFGEFGVRGVGYYVKELKRHLRQILGLDRKLRVAVMG
                     AGNLGLALADYPGFRREG"
     gene            454..>2082
                     /locus_tag="VFN38_05210"
     CDS             454..>2082
                     /locus_tag="VFN38_05210"
                     /inference="COORDINATES: protein motif:HMM:TIGR00728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0035673 - oligopeptide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006857 - oligopeptide transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide transporter, OPT family"
                     /protein_id="HET9011190.1"
                     /translation="MAHKPAPVAEAPRTTFQPYVPATQSPAEFTAKAIILGAMFGLIF
                     GASTVYLGLRAGLTVSASIPIAVLAISVLKRLGGSTILENNIVQTIGSAGESVAAGVV
                     FTVPALIFFGPRGEGFFNYFQITMLAFAGGILGVLMMVPLRRALIVKEHGVLPYPEGT
                     ACADVLVAGERGGALAKTVFQGLGIGALWKSLSWIVQIFPTEIGRSMGRTSIFPNATL
                     NLDISPEYMGVGYVIGPRIAGVMFAGGVLSWLVLLPLLSIMGNYLTVPFPPVPASGLR
                     IDQMSPGQLWSAYIRYTGAGAVLAAGLITLARTIPTIVSSFRDSMKDFSTRNAAGGRA
                     RTERDIPMTIVLAGTVLLAVFLAVAPGLPTQGNFLVSVLVVVFGFFFVTVSSRIVGLI
                     GSSSNPVSGMTIATLILTCTIFVALGWTGEWYSPIALCVGAVVCIAAANAGATSQDLK
                     TGYIVGATPIYQQYGLIIGVIVSALIIGYTTLYLHRVFGIGSEALAAPQATLMSTIIK
                     GLLSQNLPWGLVLVGVCISITLELCGIHSLSFAVG"
BASE COUNT          296 a          711 c          684 g          391 t
ORIGIN      
        1 agccttcgcg cctgaagccg gggtagtcgg ccagcgccag gcccaggttg cccgcgccca
       61 tgaccgcgac ccgcagcttt ctgtcgaggc cgagaatctg gcggaggtgg cgcttgagtt
      121 ccttgacgta atagccgacg ccgcggacgc cgaactcgcc gaagtacgcg aggtccttgc
      181 ggatctgggc ggcgttgagg tgaaactgct ccgccagggc gcgcgacgac acggtgcgca
      241 cgccggcggc gtcgagcacg gtgaggcacc gcaagtacac ggacaggcgg ttggtcgtca
      301 gctcggagat ggcgtcaccg gcattccggg ctgccggcac gcgtttgttc tccttcttca
      361 aaagctcagc atgataaccc cttcggcccc ccgccgttca acggcggcgg caatcgcggc
      421 cccgtcccga aactgtgcga agattccgtc cgtatggcac acaaaccagc accggtcgca
      481 gaggcgccgc gcacgacctt tcaaccgtac gttccggcaa cccagtcgcc cgccgagttc
      541 acggcgaagg cgatcatcct tggcgcgatg ttcgggctga ttttcggtgc ctcgaccgtg
      601 tatctcggcc tgcgagccgg cctcaccgtc agcgcgtcca tcccgatcgc ggtgctggcc
      661 atctcggtgc tgaagcgcct cggcggctcg acgatcctcg agaacaacat cgtccagacc
      721 atcgggtccg ccggcgagtc ggtggcggcg ggcgtcgtgt tcacggtgcc ggccctcatc
      781 ttcttcggcc cgcgcggcga gggctttttc aattacttcc agatcacgat gctcgcgttc
      841 gcgggcggga tcctgggagt gctgatgatg gtgccgctgc gccgcgcgct catcgtcaaa
      901 gagcacggcg tgctgcccta tccggaaggg acggcgtgcg cggacgtgct cgtcgccggc
      961 gagcgcggcg gcgcgctcgc caagacggtg ttccaggggc tcggcatcgg cgcgctgtgg
     1021 aagagcctgt cgtggatcgt ccagatcttt ccgaccgaga tcgggcggtc gatgggccgc
     1081 accagcatct tccccaatgc gacgctgaac ctcgacattt cccccgagta catgggcgtg
     1141 ggctacgtga tcggcccgcg gatcgccggc gtgatgttcg ccggcggggt gctctcgtgg
     1201 ctggtcctgc tgccgctgct cagcatcatg gggaactacc tgacggtgcc gttcccgccg
     1261 gtgccggcga gcggcctgcg catcgatcag atgtcgccgg gccaattgtg gagcgcctac
     1321 attcgctata ccggcgccgg cgccgtcctc gcggccgggt tgatcacgct ggcgcgcacc
     1381 atcccgacga tcgtgtcctc gttccgcgac agcatgaagg atttctccac gcgcaacgcc
     1441 gccggcggcc gggcccgcac cgagcgcgac atcccgatga cgatcgtcct cgcgggcacg
     1501 gtgctcctcg ccgtcttcct cgcggtggct cccggcctcc cgacgcaggg aaatttcctc
     1561 gtctccgtcc tcgtcgtcgt tttcggcttc ttcttcgtca ccgtctcgtc gcgcatcgtc
     1621 ggcctgatcg gatcgtcgtc gaacccggta tcggggatga ccatcgcgac gctgattctg
     1681 acctgcacga tcttcgtcgc gctcggatgg accggcgagt ggtactcgcc gatcgcgctg
     1741 tgcgtcggcg cggtggtctg catcgccgct gcgaacgcgg gggcgacgtc gcaggacctc
     1801 aagaccgggt acatcgtcgg cgcgacgccg atctaccagc agtacgggct gattatcggc
     1861 gtcatcgtgt cggcgctgat catcggctac acgacgctct acctgcaccg cgtcttcggc
     1921 atcggctcgg aggcgctggc ggcgccgcag gcgacgctca tgagcacgat catcaaaggt
     1981 ctgctcagcc agaacctgcc gtgggggctc gtgctcgtcg gcgtctgcat ctcgatcacg
     2041 ctcgagctct gcggcattca ttcgctgtcg ttcgccgtcg gg
//
LOCUS       DASSYW010000327         2092 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1071997, whole genome shotgun sequence.
ACCESSION   DASSYW010000327 DASSYW010000000
VERSION     DASSYW010000327.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2092)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2092)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2092
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1071997"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..466
                     /locus_tag="VFN38_05215"
     CDS             <1..466
                     /locus_tag="VFN38_05215"
                     /inference="COORDINATES: protein motif:HMM:NF017669.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="helicase HerA-like domain-containing protein"
                     /protein_id="HET9011191.1"
                     /translation="AVVSTYPTSDFYDVGELLTAMGTGEAAVTLLSEKGVPTPVVHTR
                     MLAPSSKMAPVADVDAAAKASPLFAKYGARVDAQSAREILAGRLEAAREPAPAPADKP
                     LEHIPAPKLPKAPRRAPAPDPGGIGDFLNSRQGKQIQREVIRGVFGMLKKRL"
     gene            1184..1309
                     /locus_tag="VFN38_05220"
     CDS             1184..1309
                     /locus_tag="VFN38_05220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011192.1"
                     /translation="MRAQRLLVAGWRVARVTDEQLTLQRGETGERFSLLLSSRGR"
     gene            complement(1290..>2092)
                     /locus_tag="VFN38_05225"
     CDS             complement(1290..>2092)
                     /locus_tag="VFN38_05225"
                     /inference="COORDINATES: protein motif:HMM:NF038032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="CehA/McbA family metallohydrolase"
                     /protein_id="HET9011193.1"
                     /translation="DYRTGPVYDLRADGGVALRRAAQPASRILRDVRRAGGFTQINHP
                     TIFPSSNPLFASLCRGCPWDYSAQETNYKLVDAIEVNTGPQKIGEAPNPFTTTAIDFY
                     EAALARGAHAAALGVSDSHRAGRTENASQAPVGVGATAVYAKQLSERGLKCAVKAGHT
                     YAKIAGPSGPTLRFTGKVPGARKRAIFGDGARGRSLKLEARATGGGVLQLLRDGAVMA
                     TGSGSLARTVTETGRYGLRVQNGQVTEAVGTPIWFRKATRGRVTVRGC"
BASE COUNT          283 a          742 c          775 g          292 t
ORIGIN      
        1 cgcggtcgtc tcgacctacc cgacgtcgga cttctacgac gtcggcgagc tgctgaccgc
       61 gatgggcacg ggcgaggcgg cggtcacgct gctcagcgag aagggcgtgc cgacgccggt
      121 cgtgcacacg cgcatgctcg ccccgtcgtc gaagatggcg ccggtggccg acgtcgacgc
      181 cgccgcgaag gcgtcgccgc tgttcgcgaa gtacggcgcg cgggtggacg cgcagagcgc
      241 gcgcgagatc ctcgcggggc ggctggaggc ggcgcgcgag cccgcgccgg cgcctgccga
      301 caagcctctg gagcacattc cggcgcccaa gctcccgaag gccccgcggc gggccccggc
      361 cccggatccc ggcgggatcg gggacttcct caactcgcgc cagggcaagc agatccagcg
      421 cgaggtgatc cggggggtct tcgggatgct gaagaagcgg ctgtagctcg ggacgtccaa
      481 gtcaacggtg gctgggtagg gaggcgggag tttcggtgcg ctttcgttgc atctcggcgt
      541 tgagtggtga cgccggcggg gccaggatcg tggagtggag tcgattgacc ggcctatagc
      601 ccgcaaagtg actccacttg cagtcgcggc ggcgatcgcg tcgccgcagc acggagtcgt
      661 cgcgcggcgg cagctgttgc gagcaggact cacgcgcgac cagatcgatc acctggtcgg
      721 tcggggcagc ctgctccccc tttaccgcgg ggtctacgcc gtgggccacc ggccggtcgc
      781 cgcgagatgg cggtcctatt gcacgccggt gacaccggcg cattggcccg gcagagctcc
      841 gcggggctgt ggtgcatgac gcgcccctgg catgggccgg tccacgcgat cggcccgaag
      901 tcgctcagcg gcccgggctt cgtgatccac cgcacgcgcc acctcacgcc cgaggacctc
      961 accacccact ggggcattcc ccgtcaccac gcccctcagg acactcctcg acctcagcgg
     1021 gaccctttcc gcgcgctgct gcgcgagcac agcctgccgc agccgaccag caacggcttc
     1081 gtgtgcggct acgaggtcga cctgcactgg cccgcgctga agccatcgtc gagatcgacg
     1141 gcacggcacc cacgaccacc ggcgcgcgta cgagaccgac cgtgtgcgcg cccagcggct
     1201 gctcgtggcg ggctggcgcg tcgcgcgcgt caccgacgag cagctcacac tgcagcgcgg
     1261 cgaaaccggc gagcggttca gcctgctgct cagcagccgc ggacggtgac cctgccgcgc
     1321 gtggccttgc ggaaccagat cggggtgccg acggcctcgg tgacctggcc gttctggacc
     1381 cgcaggccgt agcggccggt ctcggtcacg gtgcgggcga gggaaccaga gccggtcgcc
     1441 atcacggcgc cgtcgcgcag cagctgcagc acgcccccgc cggtcgctcg cgcctcgagc
     1501 ttcagagagc gcccgcgagc gccgtcgccg aagatcgccc gcttgcgcgc gcccggcacc
     1561 ttgcccgtga agcgcagcgt cgggccggac gggccggcga tcttcgcgta ggtgtgcccg
     1621 gccttgacgg cgcacttgag cccgcgctcg gagagctgct tcgcgtacac ggcggtcgcg
     1681 ccgaccccga ccggcgcctg ggaggcattc tcggtgcgtc cggcgcggtg ggagtcgctg
     1741 acgcccagcg cggcggcgtg cgcgccgcgc gccaatgcgg cctcgtagaa gtcgatcgcg
     1801 gtcgtggtga acgggttcgg cgcctcgccg atcttctgcg ggcccgtgtt gacctcgatc
     1861 gcgtcgacga gcttgtagtt cgtctcctgg gctgagtagt cccacgggca gccacggcag
     1921 agcgacgcga acagcggatt ggaggagggg aagatcgtcg ggtggttgat ctgcgtgaag
     1981 ccgcccgcgc ggcggacgtc gcgcaggatc cggctcgccg gctgggcggc gcggcgcagc
     2041 gccaccccgc cgtccgcgcg caggtcgtag accggcccgg tgcggtagtc ga
//
LOCUS       DASSYW010000328         2099 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_356396, whole genome shotgun sequence.
ACCESSION   DASSYW010000328 DASSYW010000000
VERSION     DASSYW010000328.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2099)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2099)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2099
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_356396"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1052
                     /locus_tag="VFN38_05230"
     CDS             <1..1052
                     /locus_tag="VFN38_05230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011194.1"
                     /translation="AVRLGSVVHRVALLESVITLWVVFGLELYLLQWLFALPLNRAIG
                     PAMALGAFATMSADAGIELAARRHGEPGLLVTQLRVSAGMNAFVAICALGIVLAGNHP
                     PNVVLDRPLTTTEWTVVTIALGVGGGTLFHLFLGGEQRVDRLFIALAGVLVLISGAAT
                     YLQLSPLLSTMFFGAMLVNTSRHRAEIAAALARVERPLYFVLLIFAGATWAAGPQGDW
                     VLPVLLFLAARIVAKVGGARLAARANDLLDVYGRDWGRALLGQGGIVLAMALSYKYEN
                     TLALPNVVFTTAVVSVLLTGLASGRFASAVLSRFAHLERGASNATRAAARVLLPHGGT
                     HKPGPVGGQASEERR"
     gene            1052..>2099
                     /locus_tag="VFN38_05235"
     CDS             1052..>2099
                     /locus_tag="VFN38_05235"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HET9011195.1"
                     /translation="MRRLLILTLLWGAMQLVVPLGDAGHGGQWLLMFGFLILAADSVG
                     ALAAMVRLPRMAGYLATGLLFGPSVLGTVSSGAIEQLAPVSSLAIALIAFLAGAELRW
                     KELRERGVVILKILASEMTMTLVAITTLLYAIRGHVPFLRGLDGLMALALCLLFASVA
                     VVHSPAVTMALLTETGARGPVARTTLGVVLIADVAVILLFSAVLTLVRAIVPSPTGGG
                     GVSDAPIVWEIFGALVIGALLGAVVAAYLRFVHRELFLFAIVVAFFGAEIARVTHVEV
                     LLTLLTAGFVAENASAPHAGEALRTAMERSAAPVFVVFFALAGASMHVSEFPVLWPLV
                     IPLVIVRMAALWAGT"
BASE COUNT          264 a          683 c          733 g          419 t
ORIGIN      
        1 aggccgttcg cctcgggagt gtcgtccacc gggttgcgct cctggaatcc gtcatcacgc
       61 tgtgggtcgt gttcggactg gagctgtacc tgctccagtg gctgttcgcc ctaccgctga
      121 atcgcgcgat cgggccggcc atggcgttag gcgcgttcgc gaccatgtcg gccgatgcgg
      181 ggatcgagct cgccgcgcgc cgccacggcg agccggggct cctcgtgacg cagctccgtg
      241 tcagcgccgg gatgaatgcg ttcgtcgcga tctgcgcgct cgggatcgtg ctggcgggca
      301 accacccgcc taacgtggtg ctcgatcgcc cactcacgac gaccgagtgg accgtggtga
      361 ccatcgcgtt gggtgtgggc ggcgggacgc tgttccacct ctttctcgga ggcgagcagc
      421 gcgtcgatcg cctgttcatc gcgctcgcgg gcgtgctcgt tctcatcagc ggcgcggcga
      481 cgtacctgca gctctcgccc ctgctttcga cgatgttctt cggcgcaatg ctggtgaaca
      541 cgtcgcgcca ccgtgcggag atcgcggcgg cgctcgcgcg tgtcgagcgg ccgctgtact
      601 tcgtgctgct gatcttcgct ggcgcaacct gggctgcagg cccgcagggc gactgggtgt
      661 tgccggtgct cctgttcctt gccgcgcgca tcgtggcgaa ggtggggggc gcacgcctgg
      721 cggcgcgagc gaacgacctg ctcgacgtgt acggtcgcga ctggggccgg gcgctgctcg
      781 gccagggcgg aatcgtgctc gcaatggcac tcagctacaa atacgagaac acactcgcgc
      841 ttccgaatgt cgtgttcacg accgcagtcg tgtccgtgtt gctcaccggc ctcgcctcgg
      901 ggcggttcgc atccgccgtg ctcagccggt tcgcgcacct ggagcggggc gcgtcgaatg
      961 caacgcgtgc ggcggcgcgt gttctgcttc cgcacggcgg cacgcacaag cccgggcccg
     1021 ttggcggcca ggcctcggag gaacgcaggt agtgcgccgc ctgctcatcc tcactctgtt
     1081 gtggggagcg atgcagctcg tcgtcccgtt aggcgatgcg ggacatggcg gacaatggct
     1141 gctgatgttc ggcttcctca tcctggccgc cgactcggtc ggcgcgctgg cggccatggt
     1201 ccgtttaccg cgcatggccg gctacctcgc cacagggctt ctcttcggcc cgtcggtgct
     1261 cggcaccgtg tcgagcggcg ccatcgaaca gctcgcgccg gtgagctcgc tcgcgatcgc
     1321 gttgatcgcg ttcctcgctg gggcggagct ccggtggaag gagctccggg agcgaggcgt
     1381 ggtcattctg aaaatcctcg cgagcgagat gacgatgacg ctcgtcgcga tcaccacgct
     1441 cttgtacgcc atcagaggtc acgttccgtt cctacgcggc ctcgatgggt tgatggcgct
     1501 cgcactctgc ctgctgtttg catcggtcgc cgtcgtccac tcgccggcgg tgacgatggc
     1561 actgctgacg gaaaccggcg cgcgggggcc ggtggcgaga acgacactcg gcgtcgttct
     1621 catcgcggac gtggcggtga tactcctctt cagcgctgtg ctgacgctcg tgcgagcgat
     1681 cgtgccgagt ccgacggggg gtggcggcgt gtcggatgca ccgatcgtat gggagatctt
     1741 cggcgcactc gtcataggag cactgctcgg agcggtagtt gcggcgtatc tgcgcttcgt
     1801 ccaccgcgag ctattccttt ttgcgatcgt cgtcgcgttc ttcggcgccg agatcgcgcg
     1861 agtgacacac gtcgaagtgc tgctcacgct gctcacggcc ggattcgtgg ccgagaacgc
     1921 atccgccccg cacgcgggag aggctcttcg cactgccatg gagcgttccg ccgcccctgt
     1981 attcgtcgtg ttcttcgcgc tcgccggggc gtcaatgcac gtgagtgagt tcccggtgct
     2041 gtggccgctg gtcattccgc tcgtgatcgt ccgaatggcg gcgctgtggg cgggaacac
//
LOCUS       DASSYW010000329         4023 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_900764, whole genome shotgun sequence.
ACCESSION   DASSYW010000329 DASSYW010000000
VERSION     DASSYW010000329.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4023)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4023)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4023
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_900764"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..875
                     /gene="trpB"
                     /locus_tag="VFN38_05240"
     CDS             <1..875
                     /gene="trpB"
                     /locus_tag="VFN38_05240"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HET9011196.1"
                     /translation="RIIAETGAGQHGVATATVCARFGLQCVVYMGEEDMRRQSLNVFR
                     MRLMGAEVVPVSSGTRTLTDATSEAIRDWVTHVTDTHYIIGSVVGPAPYPRMVRDFQA
                     IIGVEARAQVLERAGTLPRSVIACVGGGSNAMGIFHSFVPDRDVELIGVEAAGEGLDT
                     ERHSASLTRGTPGVLHGALSYLLQDDAGQVHPAHSVSAGLDYPGVGPEHSFLKDSGRA
                     TYVSVRDDEAMEGFRMLSRLEGIIPALETAHAVAWMVREHGRWSRDDVVLLCVSGRGD
                     KDVAQVMEMGILDA"
     gene            872..2599
                     /locus_tag="VFN38_05245"
     CDS             872..2599
                     /locus_tag="VFN38_05245"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HET9011197.1"
                     /translation="MTTPSVPLPAGELEPVQAPVEIALVHELLRLFGKAARAHQLYLP
                     NNPIYKQALDNLRAGFRPIWEVTDEVALAFTESEVRYAGEAVLEEGTKSSDSLPWLFY
                     KDGVRELTFVRGFDEEELAKLLDILQRVRKASPDEDDLLTLLWQGDFAYLRYRYVDMS
                     VDPTTPLGDGGERLADSQIDARKLAEEAVAGEEEGEESSSSSGVVNMADFDATLYFLD
                     EKEIEYIQSEVRREYELDLRQNVIALLFDIFEQQADPAIREEVAGILDNFMLHMLSAG
                     QFRNVAYFLRESLVASQRAIDIVPAQRERLSQIPMRLSAPEALAQLLQSMDEAQTLPS
                     QAELLELFEQLRGSALATVFDWQGRLQNPKLRPLLEQAAARLAAQSTAELVKLVSSPS
                     RNVALEAIRRAGGLRTTAAVGPIAKVLETGDAELRAAAVEALAEIGSTTALQALERGV
                     DDDEREVRIAAIRALLAKGHRAVLPRLDAIVKGRAIRDADLSEKMAAFEAYGSLCGNG
                     GVATLDSMLNGKSLFGRREDSELRACAAVALGRVGTPEAQASLRQAANEKDVVVRNAV
                     SRALRGQPS"
     gene            2596..>4023
                     /locus_tag="VFN38_05250"
     CDS             2596..>4023
                     /locus_tag="VFN38_05250"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HET9011198.1"
                     /translation="MTAPRSGPPPRPLPTPTSSPRQGAAGSPFSSDTAGDAYIRRAGK
                     GLILAFYAALRAIKMYPLENAAVVKSAEDLASLTSQLLAREQELEIRVSGEFVFINTV
                     RLRLDLDNYASFSHLLSVFRSSGVGSVHLRAAPPVKEWSRFLALLLLPSSDPPETRFH
                     QLTAKLAQQNLTMFEVGAPMEQAADEELRQKSKELAKRTYAHSVAVTKDLMTSVRLGG
                     HPNIKKIKRVVQGIVDQILNEETSLIGLTTIRDYDEYTFTHSVNVCIFSVALGKRLGL
                     GKVQLYDLGMAALFHDIGKSRVPAEIINKPSGLSDDEWRLIAAHPWLGALALFQTRGS
                     QDLPFRAMVVAHEHHMKLDLTGYPRPVRPRALSMFSKIVAVADGFDAATSRRAYQTTP
                     LTPAQVLQEMRDNPRRGMDPVVVKAFINLTGVYPVGTLVVLDTFELALVHGPNPNPEM
                     ISRPIVRVVSDAQGNVLFPGQLLDLG"
BASE COUNT          616 a         1346 c         1468 g          593 t
ORIGIN      
        1 cgcgcatcat cgccgagacg ggggcggggc agcacggcgt ggccacggcc acggtgtgcg
       61 cgcgcttcgg gctccagtgc gtggtgtaca tgggcgagga ggacatgcgc cgccaatcgc
      121 tcaacgtctt ccgcatgcgg ctgatgggcg cggaggtggt gccggtgtcg agcgggacgc
      181 gcacgctcac ggacgccacg agcgaggcga tccgcgactg ggtgacgcac gtcacggata
      241 cgcactacat catcggatcc gtcgtggggc cggccccgta tccgcgcatg gtgcgtgact
      301 tccaggcgat catcggcgtc gaagcacggg cgcaggtgct cgagcgggcg ggtacgctgc
      361 cgcgcagcgt gatcgcgtgc gtgggcggcg gctcgaacgc gatggggatc ttccacagct
      421 tcgtgcccga tcgggacgtg gagctgatcg gggtggaggc ggcgggggaa ggactggaca
      481 ccgaacggca ttcggcgtcg ctcacgcgcg gcacgccggg cgtgctgcac ggcgcgctga
      541 gctacctgct gcaggacgac gcggggcagg tgcatcccgc gcattccgtg tccgccggcc
      601 tggattaccc gggcgtcgga ccggagcact ccttcctgaa ggacagtgga cgcgccacct
      661 acgtctcggt gcgggacgac gaagcgatgg agggctttcg catgctgagc cgtctcgaag
      721 gcatcattcc cgcactcgaa acggcgcacg ccgtggcctg gatggtgcgc gaacacgggc
      781 gctggtcacg cgacgacgtg gtgcttctct gcgtgagcgg gcgcggtgac aaggatgtgg
      841 cgcaggtgat ggaaatgggt atcttggacg cgtgacaacc ccgtccgtcc cactgccggc
      901 tggggagctg gaaccggtgc aggcgccagt cgagatcgcg ctcgtccacg agctgctgcg
      961 gctcttcggc aaggcggcgc gggcgcacca gctctacctc ccgaacaacc cgatctacaa
     1021 gcaggcgctc gacaacctgc gcgccggttt ccgcccgatc tgggaggtga ccgacgaagt
     1081 cgcgctcgcc ttcaccgaga gcgaggtgcg gtacgcgggg gaggccgtgc tcgaggaagg
     1141 gacgaagagc agcgacagcc tcccctggct gttctacaag gacggcgtgc gcgagctgac
     1201 gttcgtgcgc gggttcgacg aggaggagct ggcgaagctg ctcgacatcc tccagcgcgt
     1261 gcgcaaggca tcccccgacg aggacgacct cctgaccctg ctctggcagg gcgacttcgc
     1321 gtacctgcgc taccggtacg tcgacatgtc ggtggatccc acgacacccc tcggcgacgg
     1381 gggcgagcgg ctggccgaca gccagatcga cgcgcggaag ctggccgagg aggcggtggc
     1441 cggcgaggag gagggggagg aatcgtcctc gtcgagcggc gtggtgaaca tggccgactt
     1501 cgacgccacg ctgtacttcc tggacgagaa ggagatcgag tacatccagt ccgaggtgcg
     1561 gcgcgagtac gagctggatc tccgccagaa cgtgatcgcg ctcctgttcg acatcttcga
     1621 gcagcaggcg gaccccgcca tccgcgagga ggtcgccggc atcctggaca acttcatgct
     1681 gcacatgctg tcggccggtc agttccgcaa cgtggcctac ttccttcgcg agtcgctcgt
     1741 ggcgtcgcag cgcgcgatcg acatcgtgcc ggcgcagcgc gagcggctgt cgcagatccc
     1801 gatgcggctg agcgcgcccg aggcgctggc gcagctgctc cagtcgatgg acgaggcgca
     1861 gacgctgccg tcgcaggccg agctcctcga gctgttcgag cagctgcggg gaagcgcgct
     1921 cgccacggtg ttcgactggc aggggcggct gcagaatccg aagctgcgcc cgctgctcga
     1981 gcaggccgcc gcgcggctgg cggcgcagag cacggcggag ctggtgaagc tcgtgtcgtc
     2041 gccgtcgcgc aacgtcgcgc tcgaggcgat ccgccgcgcg ggcggcctgc ggaccacggc
     2101 ggcggtgggg ccgatcgcga aggtgctgga gacaggcgac gccgagctgc gcgccgcggc
     2161 ggtggaggcg ctcgccgaga tcggatcgac gacggcgctc caggcgctgg agcgcggcgt
     2221 ggacgacgac gagcgcgagg tgcgcatcgc ggcgatccgc gcgctcctgg cgaagggcca
     2281 ccgcgccgtg ctgccgcgcc tcgacgcgat cgtgaaggga cgcgccatcc gcgacgccga
     2341 cctgagcgag aagatggcgg cgttcgaggc gtacggcagc ctgtgcggca acggcggcgt
     2401 ggcgacgctc gactcgatgc tcaacgggaa gtcgctgttc ggccggcgcg aggattcgga
     2461 gctgcgcgcc tgcgcggccg tggcgctggg tcgcgtcggc acgccggagg cccaggcgtc
     2521 gctgcggcag gcggcgaacg agaaggacgt cgtggtgcgc aatgccgtct cgcgcgcgct
     2581 gcggggacag ccctcgtgac cgcgccgcgt tccggcccgc cgccccgacc cctgcccacg
     2641 ccgacgtcgt cgccgcggca gggggccgcc ggctctccct tctcgtcgga caccgcgggc
     2701 gacgcgtaca tccgccgcgc gggcaagggg ctcatcctcg ccttctacgc ggcgctccgc
     2761 gcgatcaaga tgtatccgct ggagaacgcg gccgtggtga agtcggcgga ggacctcgcg
     2821 tccctgacgt cgcagctgct ggcgcgcgag caggagctcg agatccgcgt ctccggcgag
     2881 ttcgtgttca tcaacacggt gcgcctgcgt ctcgatctcg acaactacgc gagcttcagc
     2941 cacctgctgt ccgtgttccg gtcgtccggc gtgggctcgg tgcacctgcg cgccgcgccc
     3001 ccggtgaagg agtggtcgcg cttcctcgcg ctcctgctcc tgccgtccag cgatccgccc
     3061 gagacgcgct ttcaccagct cacggcgaag ctcgcgcagc agaacctgac catgttcgag
     3121 gtcggcgcgc cgatggagca ggcggccgac gaggagctcc gccagaagtc gaaggagctg
     3181 gccaagcgga cgtacgcgca ctcggtggcg gtcacgaagg atctgatgac gtcggtgcgc
     3241 ctgggcgggc acccgaacat caagaagatc aagcgtgtcg tgcagggcat cgtcgaccag
     3301 atcctcaatg aggagacgtc gctgatcggc ctgacgacga tccgggacta cgacgagtac
     3361 acgttcacgc acagcgtcaa cgtctgcatc ttctccgtgg cgctcggcaa gcggctcggc
     3421 ctgggcaagg tgcagctcta cgatctcggc atggcggcgc tcttccacga catcgggaag
     3481 tcgcgcgtgc cggccgagat catcaacaag ccttcggggc tgagcgacga cgagtggcgc
     3541 ctgatcgccg cgcatccctg gctgggcgcg ctcgcgctgt tccagacgcg cggctcgcag
     3601 gacctcccct tccgcgcgat ggtggtggcc cacgagcacc acatgaagct cgacctcacc
     3661 gggtatccgc gcccggtccg gccgcgcgcg ctgagcatgt tcagcaagat cgtggcggtg
     3721 gccgacggct tcgacgccgc cacctcgcgc cgcgcgtacc agacgacgcc gctgaccccg
     3781 gcccaggtgc tccaggagat gcgggacaac ccgcgccgcg gcatggatcc ggtcgtcgtg
     3841 aaggcgttca tcaacctcac cggcgtctac ccggtgggca ccctggtcgt gctcgacacg
     3901 ttcgagctcg cgctggtgca cggcccgaac ccgaatcccg agatgatctc gcgtcccatc
     3961 gtgcgcgtgg tgtccgacgc gcagggcaac gtgctcttcc cggggcagct gctcgacctg
     4021 ggc
//
LOCUS       DASSYW010000330         3942 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1072844, whole genome shotgun sequence.
ACCESSION   DASSYW010000330 DASSYW010000000
VERSION     DASSYW010000330.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3942)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3942)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3942
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1072844"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..323)
                     /locus_tag="VFN38_05255"
     CDS             complement(<1..323)
                     /locus_tag="VFN38_05255"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025033.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HET9011199.1"
                     /translation="MQPTERFSDRAAVYTRGRPTYPDAIVAHLRGAGALPEHGVVVDI
                     GVGTGLSSEPFLRAGHAVIGVEPNAPMRAVGDERLAHYGRYRSVDGRAEKTTLAPGRA
                     HLVIAG"
     gene            complement(328..1125)
                     /gene="dapB"
                     /locus_tag="VFN38_05260"
     CDS             complement(328..1125)
                     /gene="dapB"
                     /locus_tag="VFN38_05260"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: protein motif:HMM:TIGR00036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008839 - 4-hydroxy-tetrahydrodipicolinate
                     reductase [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HET9011200.1"
                     /translation="MTRVVLAGATGWAGSALARGIARQADLTLAAAVARRAAGRSLGE
                     ALDVPGLQAPVFATAVEALGAGCDVFVEFTKPDSAKANILAALDAGAHVVVGTSGLGD
                     ADYREIDARARECRRGVLACGNFAITAVLLQKFAEMAARHLDHFEIIDYAHEDKVDAP
                     SGTARELAHRVGAVRTPSIGVPLDAMRGPREARGAELDGVRVHSLRLPGYVIAVEAIF
                     GSAGQRLHLKHEASSSAEPYVDGALLAIRKVGGLLGVHRGLDAVMDD"
     gene            complement(1176..2300)
                     /locus_tag="VFN38_05265"
     CDS             complement(1176..2300)
                     /locus_tag="VFN38_05265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HET9011201.1"
                     /translation="MLTNEHRLLRDTLRDFAQQRLAPFAAEWDRNASFPREALAELAA
                     LGTFGIAVPDHYGGAGMDYLALAIALEEIAAGDGATSTIISVNNCPVCSILMGWANEE
                     QKRHYLVPLARGEMLGAFCLTEPHVGSEASGLRTTARRDGDFYVLDGVKQFITSGKHG
                     DVAIVMAVTDRSAGKRGISAFVVETATPGYVVARLEEKMGQHASDTAQILLEDCRVPA
                     TNLIGDEGTGYKIALSGLEGGRIGIASQSLGMARAAYEAALRYAKERVAFGKPIYEHQ
                     AVQFRLADMATRLEAARQLIHHAARLKDAGQPCLKEAAMAKLFASEMAERVCSDAIQI
                     HGGYGYVADFPVERIYRDVRVCQIYEGTSDIQRILIARHL"
     gene            complement(2307..2756)
                     /locus_tag="VFN38_05270"
     CDS             complement(2307..2756)
                     /locus_tag="VFN38_05270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011202.1"
                     /translation="MPIAIFAMLLFAICTWLGAGTVETVMSDFATEVGMPTWVFVAVP
                     GLLAMLFSFLIYQNAARRITTVRESMTRALLVGIATWLGIAAMISYMWCPDSRTLSCT
                     SDVLLVTGIVGGGPLLMAVLVAGFVVGTLVLRRVNWLTYEAPPPRVE"
     gene            complement(2767..3159)
                     /locus_tag="VFN38_05275"
     CDS             complement(2767..3159)
                     /locus_tag="VFN38_05275"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HET9011203.1"
                     /translation="MTERKLISSGSSFEAVAGYSRAVAEGDYVHVSGTTGFDYAKMTI
                     DPDPAAQTRQCFRNIAAALEQAGCSLDDIVRVRYFLVDAALFEQLAPIFGEHLGKARP
                     AATALVCGLVDTRMKIEIEVTARRRHWN"
     gene            complement(3164..3868)
                     /locus_tag="VFN38_05280"
     CDS             complement(3164..3868)
                     /locus_tag="VFN38_05280"
                     /inference="COORDINATES: protein motif:HMM:NF005403.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HET9011204.1"
                     /translation="MTNEQHHRPGAAPTVLVIGASRGIGLEFVRQYAADGSRVIGTAR
                     SDDGLESVRSAGGEPLLLDVLDAPAVAALPARLHDRAIDVAIVNAGVYGPRVGALTPP
                     DDEEFDRVMRTNVRAPMQLISALAPALAAHGRIAVVSSRMGSVSLMSSSAGWLYRASK
                     AAVNAAVKAASLELGPRGVVCVAFHPGWVRTDMGGAGADIDAATSVSGMRAVLAAASA
                     SHNGKFLNYGGEQLSW"
BASE COUNT          587 a         1403 c         1362 g          590 t
ORIGIN      
        1 ccggcaatca cgaggtgcgc acgaccgggc gccagcgtcg ttttctccgc gcgcccgtcc
       61 acgctccggt agcgcccgta atgcgcgagc cgctcgtcgc ccaccgcgcg catcggcgcg
      121 ttcggctcca ccccgatcac cgcgtggccg gcccgcagga acggttccga cgacagcccg
      181 gtcccgacgc cgatgtcgac caccacgccg tgttcgggca acgcgccggc cccgcgcaga
      241 tgcgcaacga ttgcgtccgg gtaggtcggc cggccgcgcg tgtacaccgc ggcgcggtcg
      301 ctgaagcgtt cggtgggctg catgccgtta gtcgtccatc accgcatcga ggccgcggtg
      361 cacgccaagc aggccgccga ccttccggat cgcgagcagc gctccgtcga cgtacggttc
      421 ggcgctcgaa ctcgcctcgt gcttcaggtg cagccgctgg ccggcactgc cgaagatcgc
      481 ctcgacggcg atcacgtaac cgggcagccg cagcgagtga acccgcacgc cgtccagttc
      541 ggcgccgcgc gcctcgcgcg ggccgcgcat cgcgtcgagc ggcactccga tcgatggcgt
      601 gcggacggcg ccgacgcggt gcgccagttc gcgcgccgtg ccggacggcg cgtcgacctt
      661 gtcctcgtgc gcgtagtcga tgatctcgaa gtggtcgaga tggcgcgccg ccatctcggc
      721 gaacttctgc agcagcaccg cggtgatggc gaagttgccg caggcgagca cgccccgacg
      781 gcactcgcgt gcccgcgcgt cgatctctcg gtagtcggcg tcgccgaggc ccgatgtgcc
      841 gacgaccacg tgcgcgccgg cgtcgagcgc ggcgaggatg ttggcctttg ccgagtcggg
      901 cttggtgaac tcgacgaaca cgtcacagcc ggcgccgagt gcttcgaccg cggtggcgaa
      961 cacgggcgct tgcaggccgg ggacgtcgag cgcctcgccc agcgaccgcc cggcggcgcg
     1021 gcgcgccacc gccgcggcga gcgtgaggtc tgcttgccgg gcgatcccgc gcgcgagcgc
     1081 ggaaccggcc cagccggtgg cccccgccag tacgacacgt gtcatggttc gttcttccct
     1141 gggctcgggc gaccggccgt tctcacggac gttcgctaca ggtggcgggc gatcaggatg
     1201 cgctggatgt cgctcgtgcc ttcgtagatc tggcacacac gcacgtcgcg gtagatccgc
     1261 tcgacgggga agtcggccac atacccgtag ccgccgtgga tctggatcgc gtccgagcac
     1321 acgcgttccg ccatctccga cgcgaagagc ttcgccatcg ccgcttcctt caggcagggc
     1381 tggcccgcgt ccttcagccg ggcggcatga tgaatcagct ggcgcgcggc ctcgagccgc
     1441 gtggccatgt cggcgagccg gaactgcacg gcctggtgct cgtagatcgg cttgccgaac
     1501 gcgacgcgtt ccttcgcgta gcgcagcgcc gcctcgtacg ccgcgcgcgc catgccgagc
     1561 gattgcgagg cgatgccgat gcgcccgccc tccaggccgg acagcgcaat cttgtagccc
     1621 gttccttcgt cgccgatcag gttggtggcc ggcacgcggc agtcctccag caggatctgc
     1681 gccgtgtccg acgcgtgctg gcccatcttc tcctccaggc gcgccacgac gtacccgggc
     1741 gtggcggtct ccaccacgaa ggcgctgatg ccgcgcttgc ccgcgctgcg gtcggtgacc
     1801 gccatgacga tcgccacgtc gccgtgcttg ccgctggtga tgaactgctt gacgccgtcc
     1861 agcacgtaga agtcgccgtc gcggcgcgcg gtggtccgca gcccggacgc ctcggagccc
     1921 acgtgcggct cggtcaggca gaacgcaccg agcatttcgc cgcgggcgag cggaacgaga
     1981 tagtgccgct tctgctcttc attcgcccag cccatcagga tcgagcacac cggacagttg
     2041 ttgacgctga tgatcgtcga ggtcgcgccg tcgccggccg cgatctcctc gagcgcgatg
     2101 gcgagcgcca ggtagtccat gccggcgccg ccgtagtggt cgggaacggc gatgccgaag
     2161 gtgccgaggg ccgcgagttc ggcgagggct tcccgcggga acgaggcgtt gcggtcccac
     2221 tcggccgcga acggcgccag gcgttgctgc gcgaagtcac gcaacgtgtc gcgcaggagc
     2281 cggtgttcgt tggtcagcat ggcatgtcac tccacgcgag gcggcggcgc ctcgtacgtc
     2341 agccagttca cccgccgcag caccagcgtg ccgacgacga agccggccac cagcacggcc
     2401 atgagcaacg gtccgccgcc gacgatgccg gtgaccagca gaacgtcgga cgtgcagctc
     2461 agtgtgcgcg aatcgggaca ccacatgtag ctgatcatcg cggcgatgcc gagccacgtc
     2521 gcgatgccga ccagcagcgc gcgcgtcatc gactcgcgca ccgtggtgat ccgcctggcc
     2581 gcgttctggt agatcaggaa gctgaacagc atggccagca ggccgggaac cgcgacgaag
     2641 acccaggtcg gcatgccgac ttcggtcgcg aaatcgctca tgaccgtttc caccgtgccg
     2701 gcgccgagcc aggtgcagat ggcaaacagc agcatggcga agatcgcgat cggcatgaac
     2761 ggtggtctag ttccagtggc ggcggcgggc ggtgacttcg atttcgatct tcatccgcgt
     2821 atcgacgagg ccgcacacca gcgcggtggc cgccggccgg gccttgccga gatgctctcc
     2881 gaaaatgggc gcaagctgct cgaacagcgc ggcgtcgacc agaaagtagc ggacccggac
     2941 gatgtcgtcg agcgagcagc ccgcctgctc cagcgccgcg gcgatgttgc ggaagcattg
     3001 ccgcgtctgc gccgccggat cggggtcgat ggtcatcttc gcgtagtcga agccggtggt
     3061 gccggagaca tggacgtaat cgccctcggc caccgcgcgg ctgtatcccg cgacggcttc
     3121 gaagctcgac cccgacgaaa tgagcttgcg ctcggtcatg cgttcaccat gagagttgtt
     3181 caccgccata gttgaggaac ttgccgttgt gcgaggcgct ggccgcggcg agcaccgcgc
     3241 gcatgccgga cacgctcgtc gccgcgtcga tgtcggcgcc ggcgccgccc atgtcggtcc
     3301 ggacccagcc gggatggaac gcgacgcaga ccacgccgcg cgggccgagt tcgaggctcg
     3361 ccgccttcac cgccgcattg acggccgcct tgctcgcgcg gtagagccag ccggcactgc
     3421 tcgacatcag cgagaccgac cccatgcggc tcgacaccac ggcgatcctg ccgtgcgccg
     3481 ccagcgctgg cgcgagcgcg gaaatcaact gcatcggcgc gcggacgttc gtgcgcatca
     3541 cccggtcgaa ctcctcatcg tccggcgggg tgagcgcgcc gacgcgcggt ccgtacacgc
     3601 cggcgttgac gatggcgacg tcgatcgcac ggtcatggag ccgcgccgga agcgcggcga
     3661 ccgcgggagc gtcgagcacg tcgagaagca gcggctcgcc tcccgcggac cggaccgact
     3721 ccagtccgtc gtcggagcgg gccgtgccga tcacccgcga cccgtccgcc gcgtactgac
     3781 ggacgaactc gagcccgatg ccgcgcgagg cgccgatcac gaggaccgtg ggcgccgcgc
     3841 cgggccggtg gtgctgttcg ttcgtcacgt cagttcaact ccccgagctg cgcctttcac
     3901 gagttccagg gccagcgctc aaccgtccct ctcggggatt ca
//
LOCUS       DASSYW010000331         2217 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_373725, whole genome shotgun sequence.
ACCESSION   DASSYW010000331 DASSYW010000000
VERSION     DASSYW010000331.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2217)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2217)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2217
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_373725"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..486
                     /locus_tag="VFN38_05285"
     CDS             <1..486
                     /locus_tag="VFN38_05285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-[acyl-carrier-protein] synthase
                     II"
                     /protein_id="HET9011205.1"
                     /translation="YGEIVGYRATGDAYHLTGQLPEHEGLQRAMRGAMADGGLVAADI
                     DYVNAHGTSTPLNDAAETAAIKAVLGEHARTVAVSSTKSMTGHMLGAAGSVEFIACTL
                     AIRDQVVPPTINHTTPDPDCCGLDFTPNQAREREVRAALSNSAGFGGHNVSLAVKRFQ
                     G"
     gene            525..1016
                     /gene="ispF"
                     /locus_tag="VFN38_05290"
     CDS             525..1016
                     /gene="ispF"
                     /locus_tag="VFN38_05290"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008685 - 2-C-methyl-D-erythritol
                     2,4-cyclodiphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="HET9011206.1"
                     /translation="MAEPLSIRSGIGYDSHRFEPGGPLVLGGVRIPFGVHLHGHSDGD
                     AVAHAVTDAILGAAALGDIGEMFSDKDSENAGRDSIEMLGLAVARLHEAGWRVGQLDV
                     VVIAETPRLAPHRAAMRARLAGATGIDPAEVSIKGKTNEGMGFVGRGEGIACLATATI
                     IRA"
     gene            1018..1635
                     /locus_tag="VFN38_05295"
     CDS             1018..1635
                     /locus_tag="VFN38_05295"
                     /inference="COORDINATES: protein motif:HMM:NF020893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HET9011207.1"
                     /translation="MLQSLLDWLAGLPSAVLYLSLALFAAVENVFPPLPTDTVVAFGT
                     WLAARGEGSAIAAFLSTWLGNIAGAAGMYAVGRRHGAMWMRRKLPRLADQAGEQRLLA
                     LYSRYGLLALVVSRFIPGVRALVPPVAGALRVPAVPAIAAMAVASAAWYGIISVVAWK
                     AGTDWDAVTATIARSGRLITIGAGVVALGAGVLWLRHRRRTRAEP"
     gene            1632..>2217
                     /locus_tag="VFN38_05300"
     CDS             1632..>2217
                     /locus_tag="VFN38_05300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HET9011208.1"
                     /translation="MSDADLRSRTFLLARFTDYVALEQGLSPRTQEAYQRDLQRFAEY
                     AAAQGDAAPPDITARILREYVYHLKDLGLSPASIRRNVSAVRTYFRFLTGDGIVVRDP
                     SERLETPKRWRTLPDVLTVDEVKQLLAAPTLDDALVFRDRALLELAYGAGLRVSEWIS
                     LGVRDLLLEDGLVRVFGKGSKERLVPIGRSAIGAA"
BASE COUNT          289 a          842 c          770 g          316 t
ORIGIN      
        1 tacggcgaga tcgtgggcta ccgggccacc ggcgacgcct accacctcac cggccagctg
       61 cccgagcacg aagggctgca gcgcgcgatg cgcggggcga tggccgacgg cgggctcgtg
      121 gccgcggata tcgactacgt gaacgcccac ggaacctcga ccccgctgaa cgacgccgcc
      181 gagaccgcgg cgatcaaggc cgtgctcggt gagcatgcga ggacggtcgc cgtctcctcg
      241 acgaagtcga tgaccggcca catgctcggc gccgccggct cggtggagtt catcgcctgc
      301 accctggcca tccgcgacca ggtcgtgccg cccacgatca atcacacgac gcccgacccg
      361 gactgctgcg gcctcgactt cacgcccaac caggcgcgcg agcgcgaggt gcgggccgcg
      421 ctgagcaaca gcgccggctt cggcggccac aacgtctcgc tcgccgtcaa gcgcttccag
      481 ggctgacggc atgacgcgga tcgtacccgc acgcccgagg tacgatggct gagccgcttt
      541 ccatccgctc cggcatcggg tacgactccc accgcttcga gccgggtggt ccgctcgtcc
      601 tcgggggggt ccgcatcccc ttcggcgtgc acctccatgg ccattccgat ggtgacgccg
      661 tggcgcacgc cgtcaccgat gccatcctgg gcgcggcggc cctcggcgac atcggggaga
      721 tgttctccga caaggactcg gagaacgccg gccgcgactc catcgagatg ctcggcctcg
      781 cggtggcgcg cctccacgag gcgggctggc gcgtcggcca gctcgacgtc gtcgtcatcg
      841 ccgagacgcc gaggctggcc ccccaccgcg cggcgatgcg ggcgcgcctc gccggcgcca
      901 ccggcatcga cccggccgag gtgagcatca agggaaagac gaacgagggg atgggcttcg
      961 tcggccgcgg cgagggaatc gcctgcctgg cgacggccac gatcatccgc gcctagcatg
     1021 ctgcagtcgc tgctcgactg gctggcgggg ctgccgtcgg cggtgctgta tctctcgctc
     1081 gccctcttcg cggccgtgga aaacgtcttt cccccgctgc ccaccgacac ggtcgtcgcg
     1141 ttcgggacct ggctcgccgc ccgcggcgag ggcagcgcca tcgccgcctt cctcagcacc
     1201 tggctcggca acatcgccgg cgccgcgggg atgtacgcgg tgggccggcg ccacggcgcg
     1261 atgtggatgc gccgcaagct gccgcggctc gccgaccagg cgggggagca gcggctgctc
     1321 gccctctact cccgctacgg gctgctcgcg ctcgtcgtca gccggttcat ccccggcgtg
     1381 cgcgccctcg tccccccggt ggccggtgca ctgcgggtgc cggccgtacc ggccatcgcc
     1441 gccatggcgg tggcctccgc agcatggtac ggcatcatca gcgtcgtcgc ctggaaggcg
     1501 ggcaccgact gggacgccgt caccgccacg atcgcgcggt ccggccggct gatcaccatc
     1561 ggggccggcg tcgtcgcgct cggcgccggt gttctctggc tccggcaccg gcgccggacg
     1621 cgcgccgagc catgagcgac gccgacctcc ggtcgcgcac cttcctgctc gcgcgcttca
     1681 ccgactacgt ggccctggag caggggctct cgcctcggac gcaggaggcc taccagcgcg
     1741 atctccagcg cttcgccgag tacgccgccg cccaggggga cgccgcccct cccgacatca
     1801 ccgcgcgcat cctccgcgag tacgtctacc acctcaagga cctcgggctg tcgcccgcgt
     1861 ccatccgccg caacgtgtcg gcggtgcgca cctatttccg cttcctcacc ggggacggga
     1921 tcgtggtgcg cgaccccagc gagcggctgg agacgcccaa gcggtggcgc accctccccg
     1981 acgtgctcac cgtggacgag gtcaagcagc tgctcgccgc gcccacgctc gacgacgcgc
     2041 tcgtgttccg cgaccgcgcc ctgctggagc tggcctatgg ggccggcctt cgggtgtcgg
     2101 agtggatcag cctgggggtg cgcgacctgc tgctggagga tggcctggtc cgcgtgttcg
     2161 gcaaggggag caaggagcgg ctcgtcccca tcggacgctc ggcgatcggg gcggccg
//
LOCUS       DASSYW010000332         2255 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1163985, whole genome shotgun sequence.
ACCESSION   DASSYW010000332 DASSYW010000000
VERSION     DASSYW010000332.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2255)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2255)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2255
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1163985"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            30..719
                     /gene="radC"
                     /locus_tag="VFN38_05305"
     CDS             30..719
                     /gene="radC"
                     /locus_tag="VFN38_05305"
                     /inference="COORDINATES: protein motif:HMM:TIGR00608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HET9011209.1"
                     /translation="MKGIAAHDRPRERLDRIGAGALGDHELLAIVLGHGHGSRSALDL
                     ASALLEGAGGLHGLARASAEELQRVDGIGSARAAQVLAAVELGRRTLSRVPRERPQLL
                     TPRDVAAYLMPEFGTCRVEQFGVVILDSKHRVLKTRLLSVGSLDASVVHPREVFRAAV
                     LGGAAAVVLFHNHPSGDPTPSDDDCALTRRLIAAGDLMGISVLDHVILADTRYISMRD
                     SERLTVFKKRE"
     gene            716..1927
                     /gene="larC"
                     /locus_tag="VFN38_05310"
     CDS             716..1927
                     /gene="larC"
                     /locus_tag="VFN38_05310"
                     /EC_number="4.99.1.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel pincer cofactor biosynthesis protein
                     LarC"
                     /protein_id="HET9011210.1"
                     /translation="MSKVLYFDCYAGVSGDMLLGGLIDAGVPIEELQRALGSLGLEEG
                     FRIDAERVLRAGVSATKFKVVAPGSPPGSHPHRHVSGIEKHVRRSALSPAAQDRAIAL
                     FRTLAEVEAAIHQMPIEKVQLHEVGALDSIIDIVGAVRALEFLGIDDIVSSPLNVGSG
                     TVECAHGTFPVPAPATARLLTGVPVYANGPSLELVTPTGALLVTAYARSYEALPEMVI
                     ERIGYGAGDRDPRGFSNTLRVLVGERVAGWHERRHQPVVEIRCEIDDMNPQIFGSLMD
                     RLLDAGALDVFYAPVQMKKNRPGTLVTVLCAPAARERLVAIMFRETTTIGVRWQEMSR
                     ECLDRAIEAVQTPLGEIRFKVARRDGRVVNAVPEYEDCLRIADARGLSVKDVQAQAVA
                     AWWQAGAAHER"
     gene            1917..>2255
                     /locus_tag="VFN38_05315"
     CDS             1917..>2255
                     /locus_tag="VFN38_05315"
                     /inference="COORDINATES: protein motif:HMM:NF020892.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HET9011211.1"
                     /translation="MSGEKFYLTTAIDYVNSRPHLGTAYEKITADVIARDRRLRGFDV
                     RFLMGNDEHSQNVFKKAKELGMEPLAYCDQMEREFRDVWRRLDVSFDDFIRTTEPRHR
                     AAVTALAKRIF"
BASE COUNT          367 a          721 c          796 g          371 t
ORIGIN      
        1 caagtatagc ggtgatggct ggtgatacga tgaaaggaat tgccgcgcac gatcggccgc
       61 gcgagcggct cgatcgcata ggcgccggag cgcttggcga tcacgaactc ctcgcgatcg
      121 tgctcggcca cggtcacggc agccggtccg cgctcgatct ggcctccgcg ctgctcgagg
      181 gtgccggcgg gctgcacggg ttggcccggg cgagcgccga ggaactgcaa cgggtggacg
      241 gcatcggcag cgcgcgggcg gcgcaggtgc tggcggccgt ggagctgggt cgtcgaacgc
      301 tctcgcgcgt gccgcgcgag cgtccgcagc tgctcacgcc gcgcgacgtg gctgcgtacc
      361 tgatgcccga gttcggcacg tgccgcgtcg agcagttcgg cgtcgtcatc ctcgactcca
      421 agcaccgggt cctgaagacg cggttgctgt cggtgggctc gctcgacgcc agcgtggtgc
      481 atccgcgcga ggtgtttcgg gccgccgtgt tgggcggggc ggccgccgtc gtgctcttcc
      541 acaatcatcc ctcgggagat ccgacgccga gcgacgacga ctgcgccctc acgcgccggt
      601 tgattgcagc cggtgacctg atgggcatca gtgttctgga ccacgtgatc ctcgcggaca
      661 cgcggtacat cagcatgcgg gattcggaac ggctgacggt gttcaagaaa cgcgaatgag
      721 caaggtcctg tatttcgatt gttacgcggg cgtctcggga gacatgctgc tcggcggcct
      781 gatcgacgcg ggtgtgccga tcgaggaact gcagagagcg ctcgggagcc tcggcctcga
      841 ggagggcttc cggatcgatg ccgaacgcgt gctgcgggcg ggggtgtccg ccacgaaatt
      901 caaggtcgtg gcgcccggtt cgccgcctgg ctcgcacccg cacaggcacg tgtcggggat
      961 tgagaaacac gttcgccgct cggcactctc gcccgcggcg caagaccgtg cgatcgcgct
     1021 cttcaggaca ctcgccgagg tcgaagcggc gatccaccag atgccgatcg agaaagtgca
     1081 actgcacgaa gtcggcgccc tcgactccat catcgacatc gtcggcgcgg tgcgagcgct
     1141 ggagtttctc ggcatcgacg acatcgtgtc gtcgccgctg aacgtcggga gcgggaccgt
     1201 tgagtgcgca cacggcacgt ttcctgttcc tgcgcccgca accgcgcgcc tgctgacggg
     1261 cgttccggtc tatgcgaacg ggccatcact ggaactcgtg actccgaccg gggcgctgct
     1321 cgtgacggcg tacgcgcggt cgtacgaagc gctgcctgaa atggtgatcg aacggatcgg
     1381 gtacggcgcc ggcgatcgcg accccagggg tttctcgaac acgcttcgcg tactcgtcgg
     1441 ggaacgcgtt gccggctggc acgaacggcg gcatcagccc gtcgtcgaga tcaggtgcga
     1501 gatcgacgac atgaaccccc agatcttcgg ctcgctgatg gaccgcctgc tcgacgccgg
     1561 cgcgctcgat gtgttctacg cacccgtgca gatgaagaag aaccggccgg gcacactcgt
     1621 gacggtgctc tgcgctcctg cggcgcgcga gcgtctcgtg gccatcatgt tccgtgagac
     1681 gacgacgatc ggcgtgcggt ggcaggagat gtcacgtgag tgcctcgacc gcgccatcga
     1741 ggcggtgcag accccgctcg gcgagatccg gttcaaggtc gccaggcgcg acggccgggt
     1801 ggtcaacgcc gttccggaat acgaagactg cctgcgcatc gcggatgcgc ggggcctgtc
     1861 ggtcaaagac gtgcaggcgc aggcggtggc ggcgtggtgg caggcgggag cggcccatga
     1921 gcggtgagaa gttctacctg acgacggcga tcgactacgt caacagccgc ccgcacctcg
     1981 gcaccgccta cgagaagatc accgccgacg tcatcgcgcg cgaccggcga ctccgcgggt
     2041 tcgacgtgcg ctttctcatg ggcaacgacg agcactcgca gaacgtcttc aagaaagcga
     2101 aagagctcgg gatggagccg cttgcgtact gcgaccagat ggagcgtgag ttccgcgacg
     2161 tctggcggcg gctcgacgtc tccttcgacg acttcattcg caccacggag ccgcggcacc
     2221 gcgcagccgt gacggccctc gcgaagagga tcttc
//
LOCUS       DASSYW010000333         3116 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1430708, whole genome shotgun sequence.
ACCESSION   DASSYW010000333 DASSYW010000000
VERSION     DASSYW010000333.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3116)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3116)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3116
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1430708"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..258)
                     /locus_tag="VFN38_05320"
     CDS             complement(<1..258)
                     /locus_tag="VFN38_05320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011212.1"
                     /translation="MSRARSWRFPLVALAALIASVPASAQSSAPAQPAPQPASAPPVS
                     VSGLLFGSYNYQLPTTPSQLANQNDNGFILDRAYLNFRAPAG"
     gene            475..1422
                     /gene="pstC"
                     /locus_tag="VFN38_05325"
     CDS             475..1422
                     /gene="pstC"
                     /locus_tag="VFN38_05325"
                     /inference="COORDINATES: protein motif:HMM:TIGR02138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease subunit PstC"
                     /protein_id="HET9011213.1"
                     /translation="MKPTRHLPSIQGSVVADRIYRATILFFALCVPVLLALIFIEVGR
                     AGWPALRQFGFDFLTSSTWDPVKGEFGAAPAILGTLLTSIIALVIATPLALGGAIFLS
                     EFSPTWLRQPLSFLIDLLAAVPSVVYGLWGVFFLVPLLRSGLMPVLRDTLHLGATPFF
                     RGPAYGPSVLAAGLILAIMVLPYIAAVSREVLVAVPRSQREAALALGATRWEAITGAV
                     VPYARTGIFGGIILGLGRALGETMAVTMVIGNRHELSASLFAPGYTMASLIANEFSEA
                     TTDIHLSSLMAVGFVLFLITLIVTAVARLLVRRVGEVRA"
     gene            1419..2315
                     /gene="pstA"
                     /locus_tag="VFN38_05330"
     CDS             1419..2315
                     /gene="pstA"
                     /locus_tag="VFN38_05330"
                     /inference="COORDINATES: protein motif:HMM:TIGR00974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HET9011214.1"
                     /translation="MIADAADRRGALARPRASGLARRRGISVLMVTLTCVAAAIAVVP
                     LVLILAYLLRQGAGALSVDFFTRMPKPVGEPGGGMANAIVGTLILIGIASLVGLPVGI
                     GAGLYLAERRGTSLANLVRFLADVLNGLPSIVMGIFAWQLLVRPVGHFSALAGGAAIG
                     AMMIPLITRTTEEMVRTVPQALREAALALGYPRWRTSLQIVLRTALGGIVTGVLVAVA
                     RVAGETAPLLFTVLGNDFWSTKVTQPIAALPLQIFTYANSPYDEWHALAWAGALVLIG
                     LVLVISVVARVVTRARHAGGHD"
     gene            2308..>3116
                     /gene="pstB"
                     /locus_tag="VFN38_05335"
     CDS             2308..>3116
                     /gene="pstB"
                     /locus_tag="VFN38_05335"
                     /EC_number="7.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein
                     PstB"
                     /protein_id="HET9011215.1"
                     /translation="MTDLVALRPVARDSAPGATGPETIAMRAVALNAWFGDVHAVRDV
                     NLDVPAGEVTAIIGPSGCGKSTLLRTLNRMHETAPLARVTGHVYFHGQDIYADGVNPI
                     TLRRHVGMVFQRPTPFPTMSIRDNVAAGLKVQPGNKLTRADVDAIVERALREAALWDE
                     VKDRLKASATGISGGQQQRLCIARALATAPHVLLLDEPTASLDPLSTQKVEELVYELR
                     KTMTVIIVTHNMQQAARVSDRTVFMLAGELVETAPTRVMFTAPADPRTEAY"
BASE COUNT          402 a         1113 c         1087 g          514 t
ORIGIN      
        1 gccggctggc gcgcggaagt tcaggtaggc gcggtccagg atgaacccgt tgtcgttctg
       61 gttcgcgagc tgcgacggcg tggtcggcag ctggtagttg tagctgccga agaggaggcc
      121 ggagacgctc accggtggag cggacgccgg ctgcggcgcg ggctgtgccg gcgcggagct
      181 ctgcgccgag gcggggacgg acgcgatcag cgcggcgagc gcgacgagcg ggaaccgcca
      241 ggaacgggca cgagacatgt ggtttgtcgg gctcggggaa gaggagtcgc tcgaccggtg
      301 cagtctcccg gcatcgaggt gcacggagtc tccgggaatc ggatcacgag agatacatga
      361 ttcggtctcc attgtgtaac ggacgacctg ctccagcgcc tgcgccgcgc cgtgacggga
      421 ccgtgacatc gcgcgccacc acttggcacc gccggccggt gagctttcgg agcgatgaag
      481 ccgacccgac atcttccgtc catccagggc tccgtcgtcg ccgaccggat ctatcgcgcg
      541 acgattctct tcttcgcgct ctgcgtgccc gtgctgctgg cgctgatctt catcgaggtg
      601 ggccgcgccg gctggcccgc gctgcggcag ttcggcttcg atttcctgac ctccagcacc
      661 tgggatcccg tcaagggcga attcggcgcc gcgccggcca tcctcggcac cctcctcacg
      721 tcgatcatcg cgctcgtcat cgccacgccg ctggcgctcg gcggggcgat cttcctgtcc
      781 gagttctcgc cgacgtggct gcgccagccg ctctccttcc tgatcgacct gctggccgcc
      841 gtgccgagcg tcgtgtacgg actctgggga gtgttctttc tcgttcctct gctccgcagt
      901 gggctgatgc ccgtcctccg cgacacgctg cacctcggcg cgacgccgtt cttccgcggg
      961 ccggcgtacg gacccagcgt gctcgcggcg gggctgatcc tcgcgatcat ggtgctcccg
     1021 tacatcgcgg ccgtttcgcg ggaggtgctc gtcgcggtcc cccgctcgca gcgcgaggcg
     1081 gcgctggcgc tgggcgccac gcggtgggag gcgatcaccg gcgccgtcgt cccgtacgca
     1141 cgcaccggca tcttcggcgg gatcatcctc ggcctcggcc gcgcgctcgg cgagacgatg
     1201 gcggtcacca tggtcatcgg caaccggcac gagctgtcgg cgtcgctgtt cgcccccgga
     1261 tacaccatgg cgtcactcat cgccaacgaa ttctccgagg cgaccaccga cattcatctc
     1321 tcctcgctga tggcggtggg gttcgtgctc ttcctcatca cgctcatcgt gaccgcggtg
     1381 gcgcggctgc tggtccgtcg cgtcggcgag gtgcgcgcgt gatcgccgac gcggccgacc
     1441 ggcgcggcgc cctcgcccga ccgcgcgcca gcggactggc gcggcgacgg ggcatcagcg
     1501 tgctgatggt gacgctcacc tgcgtcgccg cggcgatcgc cgtcgtgccg ctggtgctga
     1561 tcctcgcgta cctgctcagg cagggcgcgg gcgcgctgtc cgtcgacttc ttcaccagga
     1621 tgccgaagcc ggtcggcgag ccgggcggcg ggatggcgaa cgcgatcgtc ggcacgctga
     1681 tcctgatcgg catcgcgtcg ctcgtcgggc tgccggtcgg catcggcgcg gggctgtacc
     1741 tggccgagcg gcgcgggacg agcctcgcga acctcgtgcg cttcctggcc gacgtgctga
     1801 acgggctgcc ctcgatcgtg atgggtatct tcgcgtggca gctgctcgtg cgtcccgtcg
     1861 gccacttctc cgccctcgcc ggcggcgcgg cgatcggcgc gatgatgatc ccgctcatca
     1921 cgcgcacgac cgaggagatg gtgcgcacgg tgccgcaggc gctgcgcgag gcggcgctcg
     1981 ccctcggcta tccgcgctgg cgcacgtcgc tccagatcgt gctgcgcacc gcgctcggcg
     2041 gcatcgtcac cggcgtgctg gtggccgtgg cgcgcgtggc gggagagacc gcgcccctcc
     2101 tgttcaccgt gctcgggaat gacttctggt ccacgaaggt cacgcagccc atcgcggcgc
     2161 tgcccctcca gatcttcacc tatgccaaca gcccctacga cgaatggcac gcgctcgcct
     2221 gggcgggggc actcgtgctc atcggtctcg tgctcgtgat cagcgtcgtc gcccgcgtcg
     2281 tcacccgtgc gcggcacgcc ggcggtcatg actgacctcg tcgcgctgcg cccggtcgcg
     2341 cgcgactccg cgcccggcgc gaccggcccg gagaccatcg ccatgcgcgc cgtcgcgctc
     2401 aatgcctggt tcggcgacgt gcacgccgtg cgcgacgtga acctcgacgt cccggcgggc
     2461 gaggtgacgg cgatcatcgg gccgtccggc tgcggcaagt ccaccctgct ccgcacgctc
     2521 aaccggatgc acgagaccgc gccgctcgcc cgcgtcaccg gtcatgtcta ctttcatggc
     2581 caggacatct acgccgacgg ggtgaacccg atcaccctgc gccggcacgt gggcatggtg
     2641 ttccagcgtc cgacgccctt ccccacgatg tcgattcgcg acaacgtggc cgcggggctc
     2701 aaggtgcagc ccggaaacaa gctgacgcgt gccgacgtgg acgcgatcgt ggagcgcgcg
     2761 ctgcgcgagg cggcgctgtg ggacgaggtg aaggaccggc tgaaggccag cgcgacgggg
     2821 atctccggcg gccagcagca gcgcctctgc atcgcgcgcg ccctggccac ggcgcctcac
     2881 gtgctcctgc tggacgagcc caccgcctcg ctcgacccgc tcagcaccca gaaggtggag
     2941 gagctggtct acgagcttcg caagaccatg acggtgatca tcgtgacgca caacatgcag
     3001 caggcggcgc gggtgtcgga tcgcacggtc ttcatgctgg ccggcgagct ggtggagacg
     3061 gcccccaccc gggtgatgtt caccgcgccc gccgacccgc gcaccgaagc ctacat
//
LOCUS       DASSYW010000334         3740 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_718991, whole genome shotgun sequence.
ACCESSION   DASSYW010000334 DASSYW010000000
VERSION     DASSYW010000334.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3740)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3740)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3740
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_718991"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..210)
                     /locus_tag="VFN38_05340"
     CDS             complement(<1..210)
                     /locus_tag="VFN38_05340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011216.1"
                     /translation="MLNLLFAAANLFHPLPPAALDRDGLPARAPSAVGMSAARLATIN
                     RVVERGIKAGGYPGASVVVGRKGAVV"
     gene            576..1187
                     /locus_tag="VFN38_05345"
     CDS             576..1187
                     /locus_tag="VFN38_05345"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HET9011217.1"
                     /translation="MTNPSDVMENEQLTVQRAIDGDQGAMRALWTRHAPHIDVVVRRL
                     VGHDPDLAADVAQEVWIQIFRALPSFRGDAQFGTWAHRIAVNRTLNALRRTRRTEAME
                     VDVEDDSASVEPEAERAMLAASIEEAAARLSPGARTVFLLHDVEGYTHEEIATRLGIT
                     AGGSKSQLFKARAKLRVMLAHLIDAPSSMKTRPNATGHAAPLY"
     gene            1156..1887
                     /locus_tag="VFN38_05350"
     CDS             1156..1887
                     /locus_tag="VFN38_05350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011218.1"
                     /translation="MRPDMPHLSTDRLAALGDEQPTHAEAAHLAACEACAGERAAYRS
                     LVAMAREEGTSLGLPLTRWDAIAAALEVDAPAVVHRRATRVAPHWPLRAAAGLLLMAG
                     GAMMGRASAGVDPLPGAGRDRVPAATAAASTASSTAPAPDSAFASIEEARAAQRRSEQ
                     LYQQAVAYLAQYDSTAVDDGSPVAYKSRLAALDRVISATSEAMREAPHDPVINGYYLT
                     TLGQREATIRQLNTALPASLRLDSF"
     gene            1908..3131
                     /locus_tag="VFN38_05355"
     CDS             1908..3131
                     /locus_tag="VFN38_05355"
                     /inference="COORDINATES: protein motif:HMM:NF024578.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HET9011219.1"
                     /translation="MDCPIRTPLSLSLSFVAVLAAGAPLHAQRADAGGARRAPRAESP
                     ENDEQQLRRLERRADSLTQLYGEGEELSAVQRHAVGVELDRTMARIEELARRIAGAAS
                     RSMGMRVRVAPMLDERNAVAISNALRQAEASQLPLPRGWLGIVVSGTAREPRVDNGEL
                     IIRYLTHPVIVSVDPSSPAEEAGLSPSDTLIAYDGRDVRDRDISLTRLLVPNARVLVR
                     IRRDGRTKDVPVTIRDVPSRIRLRAEANFELRAPRVAGLPETMVFPRGPVPAAAMAPR
                     LAPVPVMGEVAPMPPLPPLPPQAPTPAMIFGYGLSGVAGAQLAALTDGLARTVGVRRG
                     VLVTYAAVGSPAYLSGLRDGDVIVRVAGDQVRTVAEVREQVQMAAENGASSVELDCVR
                     EKKPRKVVLRWAGSR"
     gene            complement(3138..>3740)
                     /locus_tag="VFN38_05360"
     CDS             complement(3138..>3740)
                     /locus_tag="VFN38_05360"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HET9011220.1"
                     /translation="KDVWPDIPGLDRVYGANAHVCPDCDGRECANRKVVVIGKGRKAV
                     GMALNLTTWTREIIICTNGEPPDLDLPEYCEKLDALNIPVIQAPITRVSHDGARVHSL
                     ELEGGMALDTDKIFLAVGQYPADDLGAQLRCDRDAGGHIIVDDAYHTSVMNCFAAGDI
                     VPGPQLAIAAAADGAIAALAIHKSLVPDERQLKRLETPEY"
BASE COUNT          530 a         1350 c         1330 g          530 t
ORIGIN      
        1 caccaccgct cccttccggc ccacgacgac cgaggccccc ggatacccgc ccgccttgat
       61 cccccgttcc acgacgcgat tgatcgtcgc caggcgggcg gccgacatgc ccacggcgct
      121 gggcgcgcgg gccggcagcc cgtcgcggtc gagcgcggcg ggggggagcg gatggaagag
      181 attcgcggcg gcgaacagca gattcagcaa cgcggtgctc ctcgtgatct acccgacgaa
      241 acccggtact gccgggtacg ctaggcagga tgcgtgctca tgtgaaaaac gggagaaccg
      301 ggcctgggtg ggggaacggc agggcccggt ttccatcggt acagcgcggg ggagggcagg
      361 ttccatggag aggggcggcc cgcccataat gtcagctgtg gatacgacga gcaagagctt
      421 gggctgtcac aacataggat gggcccgtta atgcgccgtc tgatgccgcg aagcatcggg
      481 gcccgggagg tgagacccgc cctgccgcgc tcccgccacc tgaagccgga gggtgcattc
      541 gtccgtacgg agggcaacct tttccccctc cggtcgtgac caatccctcg gacgtcatgg
      601 agaacgaaca gctcaccgta cagcgcgcca tcgatggcga ccaaggggcg atgcgggcgc
      661 tgtggacgcg ccatgcaccg cacatcgacg tcgtcgtgcg ccggctggtg ggccatgacc
      721 cggatctcgc ggccgacgtc gctcaggagg tctggatcca gatcttccgg gcactgccca
      781 gctttcgggg cgacgcgcag ttcggcacct gggcgcaccg catcgcggtg aaccgcacgc
      841 tcaacgccct gcgccggacg cgccgcacgg aagcgatgga ggtggatgtg gaggacgaca
      901 gcgcgtcggt ggaaccggag gcggagcggg cgatgctcgc ggcatccatc gaggaggcgg
      961 cggcccggct gtcgcccggc gcgcggacgg tgttccttct ccatgacgtg gaaggctata
     1021 cgcacgagga gatcgccacc cgcctcggca tcacggcggg cggctccaag tcccagctgt
     1081 tcaaggcgcg cgccaagctg cgcgtgatgc tcgcgcacct gatcgacgca ccatcttcga
     1141 tgaagactcg acccaatgcg accggacatg ccgcacctct ctactgaccg cctcgccgcc
     1201 ctcggcgacg agcagccgac gcacgccgag gcggcgcatc tcgccgcctg cgaggcctgc
     1261 gccggcgagc gcgccgcgta tcggtccctc gtggcgatgg cgcgcgaaga gggcacgtcg
     1321 ctcggactgc cgctcacgcg ctgggacgcc atcgccgccg cactggaagt cgacgcgccc
     1381 gcggtggtcc atcggcgcgc gacgcgcgtc gcgccgcact ggccgctgcg cgccgccgcg
     1441 gggcttctgc tcatggcggg cggcgcgatg atgggacgcg cgagcgcggg cgtggatccg
     1501 ctgccggggg ctggccgcga ccgggttccc gccgccaccg ccgccgcgag caccgcgtcg
     1561 tccaccgccc cggcacccga ttcggcgttc gcctccatcg aggaggcgcg cgcggcgcag
     1621 cgacgctcgg agcagctcta ccagcaggcg gtcgcctatc tggcgcagta cgacagcacc
     1681 gcggtcgacg acggcagccc ggtcgcctac aagtcgcggc tcgccgcgct cgatcgcgtg
     1741 atctcggcca cgagcgaggc gatgcgcgag gcgccgcacg atccggtcat caacggctac
     1801 tacctcacca cgctcggcca gcgcgaggcc accatccggc agctcaacac cgcgctgccg
     1861 gcgagcctcc ggctcgacag cttctgatcc tccttctgcg atagacgatg gactgcccga
     1921 tccgcacccc gctctccctg tccctctcct tcgtcgcggt gctcgccgcc ggcgcgccgc
     1981 tgcacgcgca gcgcgccgac gccggcggtg cgcgccgcgc gccgcgcgcg gagtcccccg
     2041 agaacgacga gcagcagctc cgccggctcg agcgccgggc cgactccctc acgcagctct
     2101 acggcgaggg cgaggagctg agcgccgtgc agcggcacgc ggtcggcgtc gagctcgatc
     2161 gcacgatggc ccgcatcgag gagctggcgc gccgcatcgc cggcgcggcg tcgcggtcga
     2221 tgggcatgcg cgtccgggtg gcgcccatgc tggacgagcg caacgccgtg gcgatcagca
     2281 acgcgctgcg gcaggcggag gcgagccagc tgccgttgcc gcgcggctgg ctgggcatcg
     2341 tcgtctccgg cacggcgcgc gagccgcgcg tggacaacgg ggagctcatc atccgttatc
     2401 tcacgcatcc ggtgatcgtt tcggtggatc ccagctcgcc ggccgaagag gcggggctgt
     2461 cgccgagcga caccctgatc gcctacgacg gacgcgacgt gcgcgaccgc gacatctcgc
     2521 tcaccaggct gctggtcccg aacgcgcgcg tgctggtgcg catccgccgc gacggcagga
     2581 cgaaggacgt gccggtgacg atccgggacg tgccgtcgcg catccggctg cgtgccgagg
     2641 cgaacttcga gctgcgcgcg ccgcgcgtgg ccggccttcc cgagacgatg gtcttcccgc
     2701 gcgggccggt gcccgccgcc gccatggcgc cgcgcctcgc gcccgtgccg gtgatgggtg
     2761 aggtggcgcc gatgcccccg ctgcctccgc tgcccccgca ggcgccgact ccggcgatga
     2821 tcttcgggta cggcctgagc ggcgtggcgg gcgcgcagct cgccgccctc accgatggtc
     2881 tggcgcgcac cgtcggggtg cgacgcggcg tgctcgtcac ctatgcggcc gtcggctctc
     2941 cggcgtatct gtcggggctc cgggatggcg acgtgatcgt ccgcgtcgcg ggcgaccagg
     3001 tgcgcaccgt ggccgaggtt cgcgagcagg tgcagatggc ggcggagaac ggcgcgagct
     3061 ccgtggagct cgattgcgtg cgcgagaaga agccgcgcaa ggtcgtgctg cgctgggccg
     3121 gaagccgcta gcgcgcctca gtactccggc gtctccagcc gcttcagctg ccgctcgtcg
     3181 gggacgagcg acttgtggat cgccagcgcg gcgatcgcgc cgtcggctgc cgcggcgatc
     3241 gccagctgag gaccgggcac gatgtcaccc gccgcgaagc agttcatcac cgacgtgtga
     3301 taggcgtcgt ccacgatgat gtgccccccg gcgtcgcggt cgcagcggag ctgcgctccc
     3361 agatcgtcgg cgggatactg tccgacggcc aggaagatct tgtcggtgtc cagcgccatc
     3421 cccccttcga gctccaggga gtgcacccgc gcgccatcgt gcgacacgcg agtgatcggg
     3481 gcctggatca ccgggatgtt cagcgcgtcg agcttctcgc agtactccgg aaggtcgagg
     3541 tcgggcggct cgccattcgt gcagatgatg atctccctcg tccacgtggt gaggttcagc
     3601 gccatcccca ccgccttccg tcccttcccg atcaccacca ccttccggtt cgcgcactcc
     3661 cgcccgtcgc agtcggggca gacgtgagcg ttcgcgccgt agactcgatc gagcccggga
     3721 atgtcgggcc acacgtcctt
//
LOCUS       DASSYW010000335         3039 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_947035, whole genome shotgun sequence.
ACCESSION   DASSYW010000335 DASSYW010000000
VERSION     DASSYW010000335.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3039)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3039)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3039
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_947035"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..702
                     /locus_tag="VFN38_05365"
     CDS             <1..702
                     /locus_tag="VFN38_05365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011221.1"
                     /translation="VTKLREHLEKRDLGVQHVVVFVDELNKYAPADGPDTYVRKMLLD
                     IAERGRYLGLVLFAAQQFRSQVHRRVVGNSGTALYGRMDGDELATPGYAVLSPAIKTK
                     LATLEKGQLMVRHPHFTQPIFVRFPRPSIMRGRDGVTRYPQAATPTLHSAVLRTLRGM
                     DPTLSLGWLQDVTALATDDEILRARNDVVRTRPGDVRKAFAAHFRAAVVPRTATRAST
                     PAPLPAVPSDDPYGF"
     gene            828..1649
                     /locus_tag="VFN38_05370"
     CDS             828..1649
                     /locus_tag="VFN38_05370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6263 family protein"
                     /protein_id="HET9011222.1"
                     /translation="MRSFAATALFAILCVPAVHAQGVLLRVHPHVGDTLHTRLEQQTE
                     VSTTMPGSNGRAVKSVTTSVTLNSRTIVQASSPTSTLVLTIVDSADLRTSDTHGAAQV
                     AEAERSLRGQQMMLQLGADGTVESARDVRGIPVPRDVADAMSAMPAVFPRRAVAVGEQ
                     WTRELPLPSGGALGARGSAHVSATFRLDSLDRGGNLAWVSMRGEIIPDAGNQGMELTG
                     GVTGSMQVDRQRGWMTDSRFSVIVRSLVTPPAVSGLAPMRFVTRVTQRLRTMDKR"
     gene            1734..2930
                     /locus_tag="VFN38_05375"
     CDS             1734..2930
                     /locus_tag="VFN38_05375"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair exonuclease"
                     /protein_id="HET9011223.1"
                     /translation="MRLVHLSDLHLGYRQYQRLTPRGINQREADVAQSFTRALDKVIE
                     LAPDVVLIGGDVFHQVRPTNTAILHAYLQFARLRAALPHTEIVMVAGNHDTPRSTDTG
                     SILRLFAALGLHVVDAEAKALEFPALDLSVLAVADNQHPRPKLVPAGTRRWNVLLLHG
                     EVEGMLGPFAATREPVSQEIAQEDLYSSAWDYIALGHYHVYRRIAPNQFYSGSLDYTS
                     TNTWGEKMEEELAGVPGKGIIEHDLATGRHIFHHLPPTREFVDLPAVSARGLTTEEVN
                     ERVLGAIDACPGGIDDKVVRLVVRDLPRHITRQLDHRQLRDFRRRALHFHLDTRRPEM
                     IRSVGHGAPGKRPSLADFVRDKLRERVVGADVDRDALVTLGLRYLKDAEERESASTGT
                     PTGAEG"
BASE COUNT          452 a         1066 c         1066 g          455 t
ORIGIN      
        1 gtgacgaagc tgcgggagca tctggagaag cgcgatctgg gcgtccagca cgtcgtcgtc
       61 ttcgtggacg agctcaacaa gtacgcgccg gccgacgggc cggacaccta cgtccgcaag
      121 atgctgctcg acatcgcgga gcggggccgg tatctggggc tcgtgctctt cgcggcgcag
      181 cagttccggt cgcaggtcca ccggcgcgtc gtgggcaact cgggcacggc gctgtacggg
      241 cggatggacg gcgacgagct ggcgacgccg ggctacgcgg tgctcagccc ggcgatcaag
      301 accaagctcg cgacactgga gaaggggcaa ctgatggttc gtcatccgca cttcacgcag
      361 ccgatcttcg tgcgtttccc gcgcccgtcc atcatgcgcg ggcgcgacgg cgtgacccgc
      421 tatccgcagg ccgccacgcc cacgctgcac tcggccgtgc tgcggacact gcgcggcatg
      481 gatcccaccc tctcgctggg ctggctccag gacgtcactg cgctggccac ggacgacgag
      541 atcctccgcg cgcgcaacga cgtcgtgcgg acgcggccgg gcgacgtgcg caaggcgttc
      601 gccgcgcact tccgcgcggc ggtggtcccg cgcacggcca cccgcgcgag cacccccgcg
      661 ccgctccccg cggtgccgtc cgacgacccg tacgggtttt aatgtcatcc cgcaggagcg
      721 agcgcaacga gcgagtgtcg ggatctgacg tcctcgccaa gtggcctgcc acgattcgga
      781 gaaggtggat cccgacaggc gcttcacgcc tgcgggatga cagggtcgtg cggtcgttcg
      841 ccgcgaccgc gctgttcgcc atcctgtgcg tgccggctgt ccatgcgcag ggcgtcctgc
      901 tgcgcgtgca tccccacgtg ggcgacaccc tgcatactcg tctcgagcag cagaccgagg
      961 tcagcacgac gatgcccggc agcaacggtc gtgcggtgaa gtcggtgacg acgtcggtga
     1021 cgctgaactc gcggacgatc gtgcaggcat cgtctcccac gagcacgctg gtgctcacga
     1081 tcgtggattc ggccgatctc cgcacctcgg acacgcacgg tgcggcgcag gtggccgagg
     1141 ccgagcggtc gctgcgcggc cagcagatga tgctgcagct cggggccgac gggacggtgg
     1201 agagcgcacg cgacgtgcgt ggcatcccgg tcccgcgcga cgtcgccgac gcgatgtcgg
     1261 ccatgccggc ggtctttccg cggcgggccg tcgccgtggg agagcagtgg acgcgcgagc
     1321 tgcccctgcc atccgggggc gcgctcgggg ctcgcggctc ggcgcacgtc agtgccacct
     1381 tccgactcga ctccctcgac cgcggcggca acctcgcctg ggtatccatg cgcggcgaga
     1441 tcattcccga cgcggggaac cagggaatgg aactgaccgg cggcgtcacc ggttccatgc
     1501 aggtggaccg ccagcgcggg tggatgaccg attcgcgctt cagcgtgatc gtgcgctcgc
     1561 tcgtcacgcc gccggcggtc agtggcctcg cgccgatgcg cttcgtgacg cgcgtgacgc
     1621 agcggctgcg cacgatggac aagcgctgaa ccggcgttag gttttccaca tgcggggcat
     1681 gggagccaac tcccgtcccg gcaactggtt agctcatctc gatcccgctg cgcctgcgcc
     1741 tcgtccacct ctccgacctc cacctcggct accgccagta tcagcggttg actccgcgcg
     1801 ggatcaacca gcgcgaggct gacgtcgcgc agtccttcac gcgcgcgctg gacaaggtga
     1861 tcgagctggc gccggacgtc gtgctgatcg gcggcgacgt gttccatcag gtgcggccga
     1921 cgaacacggc gatcctgcac gcgtatctcc agttcgcgcg gctgcgcgcc gcgctgccgc
     1981 acacggagat cgtgatggtc gcggggaatc acgacacgcc ccgctccacg gacaccggct
     2041 ccatcctgcg cctgttcgcc gcgctcgggc tgcacgtcgt ggacgcggag gcgaaggcgc
     2101 tggagtttcc cgcgctcgac ctgtcggtgc tcgctgtcgc cgacaaccag catccgcgcc
     2161 ccaagctcgt cccggccggc acgcgccgct ggaacgtgct cctgctgcac ggcgaggtgg
     2221 agggcatgct cggcccgttc gccgcgacgc gcgagccggt gtcgcaggag atcgcgcagg
     2281 aggatctgta ctcgagcgcg tgggactaca tcgcgctcgg gcactaccac gtgtatcgcc
     2341 ggatcgcgcc gaatcagttc tacagcggct cgctcgacta cacgagcacg aacacgtggg
     2401 gcgagaagat ggaggaggag ctggccggcg tgccgggcaa ggggatcatc gagcacgacc
     2461 tcgccaccgg ccggcacatc ttccatcacc tgccgccgac gcgtgagttc gtcgacctgc
     2521 cggcggtgtc ggcgcgcggg ctgaccacgg aagaggtcaa cgagcgcgtg ctcggcgcca
     2581 tcgacgcgtg ccccggcggg atcgacgaca aggtcgtgcg cctggtcgtg cgcgacctgc
     2641 cgcgccacat cacgcgccag ctcgatcacc gccagctgcg cgacttccgc cggcgcgcgc
     2701 tgcacttcca tctcgacacg cgccgtccgg agatgatccg gtcggtgggg cacggcgcgc
     2761 cgggcaagcg tccgtcactc gccgacttcg tgcgcgacaa gctgcgtgag cgcgtcgtcg
     2821 gcgccgacgt cgaccgcgac gcgctggtga cgctggggct gcgctacctg aaggatgcgg
     2881 aggagcgcga gagcgcgtcg accgggacgc cgacgggggc ggaggggtag atgcgcctca
     2941 acagcctgcg cctctgcaac ttccgccagc actccgacag cttcatcagc ttcgacacgg
     3001 ggctgacggg gatcatcggc gcgaacggct ccggcaagt
//
LOCUS       DASSYW010000336         2217 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_515410, whole genome shotgun sequence.
ACCESSION   DASSYW010000336 DASSYW010000000
VERSION     DASSYW010000336.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2217)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2217)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2217
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_515410"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..520)
                     /locus_tag="VFN38_05380"
     CDS             complement(<1..520)
                     /locus_tag="VFN38_05380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF969 domain-containing protein"
                     /protein_id="HET9011224.1"
                     /translation="MLTLIGILIVVAGFAARLNPLLVVTVAGLATGLASGLGPVEVVS
                     AFGKAFTESRYVAIVWLVLPVIGLLERAGLKERARTVIAAIPAATTGRVLMIYFAIRQ
                     VTAALGLISLGGHAQMVRPLVAPMAEGAAENRFGTLPARTRFRIRAHSAAADNVAVFF
                     GEDIFIAIGSILL"
     gene            664..2148
                     /locus_tag="VFN38_05385"
     CDS             664..2148
                     /locus_tag="VFN38_05385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011225.1"
                     /translation="MQRPLPPLALALRLALLILLALFLGVVGAHAQLVTPKTVPVLQD
                     AQFDVAPSSRPGLGSSFLALEDSLSDPFSNPAKATRLRGVSVAMAPYTHSISGQRGGG
                     STLPAALYANLGPWAGAILVTYQNIDRAGPAFNRPVSERTANTQYVSGLLARRIGGVS
                     VGAAASHAGLEAVDGVDLLYGGSDRIDQRGSVNDFRLGITREWAPGHAAELLGIHSRT
                     DMTHDVHFTTWTWDPVLRTTIVAERQERNLDQTNIWGIHSKYYRPVGTAGWRVGGLVT
                     ANRLSHPKIPNYVLQNIPRDPGTTYGYDLGVGAARIAGGSSFFVDLIVEPMRSETWAD
                     LARDTTDVGGTVIPAGARTMENSFDFHNSKARVGAGHAFPVNADSSNTLAFDVGLSLY
                     TIGYGLRQTNNVARTTRRQAERWTELSQSLGVRFRSRGFELSYAFRRVCGNQGCDDTG
                     PGILVVPGVALESARGIIAAPSAPLFIQGGNETTHRFSVGVAVR"
BASE COUNT          329 a          792 c          804 g          292 t
ORIGIN      
        1 tcagcaggat ggacccgatg gcgatgaaga tgtcctcgcc gaagaagacg gcgacgttgt
       61 ccgccgcggc cgagtgcgcg cggatgcgga agcgcgtcct ggccggcagc gtcccgaagc
      121 ggttctccgc cgccccctcg gccatcggtg ccacgagggg gcgcaccatc tgcgcatggc
      181 cgcccaggga gatgaggccg agcgccgccg tgacctgccg gatggcgaag tagatcatca
      241 gcacccgccc cgtggtggcg gcggggatgg cggcgatgac ggtgcgcgcg cgctccttga
      301 gccccgcccg ctcgagcagc ccgatcacgg gcagcacgag ccagacgatg gcgacgtagc
      361 ggctctcggt gaacgccttg ccgaacgccg acaccacctc cacggggccg agcccgctgg
      421 cgagcccggt cgccaggccg gccaccgtga cgacgagcag cgggttgagg cgcgcggcga
      481 agccggcgac gacgatgagg atgccgatca gggtgagcac ggatctccgg agggccgcgt
      541 gagcgccggt gtcggcgcgg cggaatatcg aatccgtggc ggccgggggt aagtgccggt
      601 gacggcggcg tcccccggga ggttgggctt catgcctgtc ccttcctcgt gccgagtgag
      661 cccatgcagc gccccctccc cccgctcgcc ctcgccctcc gcctcgccct gttgatcctg
      721 ctggcgctct ttctcggcgt cgtgggcgcc cacgcccagc tcgtgacgcc gaagacggtg
      781 ccggtgctcc aggacgcgca gttcgacgtc gcgccgtcga gccggccggg gctgggcagc
      841 tccttcctcg cgctcgagga cagcctgtcc gatcccttct ccaatcccgc gaaggcgacg
      901 cggctgcgcg gcgtgagcgt ggccatggcg ccctacaccc acagcatcag tggccagcgc
      961 gggggtggca gcaccctgcc cgcggccctc tacgcgaacc tcggcccgtg ggccggcgcg
     1021 atcctcgtca cgtaccagaa catcgaccgc gccggtccgg cgttcaaccg tcccgtgagc
     1081 gagcggaccg cgaacaccca gtacgtgagc gggctgctcg cgcggcgcat cggcggcgtg
     1141 tcggtgggcg ccgccgcgtc gcacgccggc ctcgaggccg tcgacggcgt cgacctgctg
     1201 tatggcggga gcgaccgcat cgaccagcgg gggagcgtga acgacttccg gctcggcatc
     1261 accagggaat gggcgccggg ccacgccgcc gagctgctcg gcatccacag ccgcacggac
     1321 atgacgcacg acgtgcactt cacgacgtgg acgtgggatc cggtgctgcg gacgacgatc
     1381 gtcgccgaac ggcaggagcg caacctcgac cagacgaaca tctgggggat ccactcgaag
     1441 tactaccgac ccgtgggcac ggcgggctgg cgcgtcggcg gactcgtgac ggcgaatcgc
     1501 ctctcgcatc cgaagatccc gaactacgtg ctgcagaaca tcccgcgcga cccgggcacg
     1561 acgtacgggt acgacctcgg cgtcggcgcg gcgcggatcg ccggcggctc cagcttcttc
     1621 gtggacctga tcgtcgagcc gatgcgcagc gagacgtggg cggacctcgc gcgcgacacc
     1681 accgatgtgg gcggcaccgt gatccccgcc ggcgcgcgga cgatggagaa cagcttcgac
     1741 ttccacaaca gcaaggcgcg cgtcggcgcg gggcacgcct ttccggtgaa cgccgactcg
     1801 agcaacaccc tggcgttcga cgtggggctc tcgctgtaca cgatcggcta cggcctgcgg
     1861 cagacgaaca acgtcgcgcg cacgacgcgc cggcaggccg agcgctggac ggagctctcc
     1921 cagagcctcg gcgtccgctt ccgctcgcgc ggcttcgagc tgtcctacgc cttccgccgc
     1981 gtctgcggca accagggctg cgacgacacg ggcccgggga tcctggtcgt gccgggcgtc
     2041 gcgttggagt cggcgcgcgg gatcatcgcg gccccgagcg cgccgctgtt catccagggc
     2101 gggaacgaga cgacgcatcg attcagcgtg ggggtcgcgg tacgatgagg gctggaggcc
     2161 gcggcgctca acggccgagg cggcggcgct caacggccga ggcggcggcg ctcaacg
//
LOCUS       DASSYW010000337         3460 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_999021, whole genome shotgun sequence.
ACCESSION   DASSYW010000337 DASSYW010000000
VERSION     DASSYW010000337.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3460)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3460)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3460
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_999021"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..488)
                     /locus_tag="VFN38_05390"
     CDS             complement(<1..488)
                     /locus_tag="VFN38_05390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011226.1"
                     /translation="MTSELTIPLTVLVLGSNEERCMDLATHLPPGQADVVCFSDPDAN
                     PETPREFIDLCLVEGTAEQDAGADLIRRARRRWPTVGICCVECSDIVEALAAGADDAV
                     PAGAPRAHVAAQITAAFRRARIASAQLRIAYGDVVYDREARRVWCAGDEVQLTPRELR
                     LF"
     gene            640..1107
                     /locus_tag="VFN38_05395"
     CDS             640..1107
                     /locus_tag="VFN38_05395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011227.1"
                     /translation="MRRLSAALSLALALAVTGCIRDVAMISGPGTKASGGADGIAGAY
                     VLQTVNGQPLPYTYRTSGADTYVIMDATVTMTATGQWTEVWHERQTVAGVVTLKTFTD
                     PGTFTITGTKITVTIVNGSSGSGTFDGTYASGTLTLPGQSTPGGPIETMVYTK"
     gene            complement(1133..>3460)
                     /locus_tag="VFN38_05400"
     CDS             complement(1133..>3460)
                     /locus_tag="VFN38_05400"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HET9011228.1"
                     /translation="HALRTTVGIVLASRNPMFLWWGPELVQLYNDAYRPSLGHGARHP
                     GALGAKGREFWTDIWHEIGPQIHQVMTTGEPTWHEDQFLPIERNGRLEEVWWTYGYSP
                     VFDDDGAIGGTLVVCQEVTSRMLAERERERLLAETARVERRAARVLEQVADEHLTMDA
                     NFRILTLNASAERNLGVARERLIGLTHWEAFPASLGTKVEETYRRVMAERVEAHITHH
                     YVGEQYDRHLEIDAYPTDDGGMAVFWREVSERVRTEARLRESESRYRMLFNSLDEAFC
                     VIEVQFDEAGRALDYRFTEANPAFVAQTGLADPVGRTIRELAPNIEEFWFDIYGKVAL
                     TGEATRFEAPSAALNRYYDAYAFRIGAPDDHLVAILFNDITAERAAKQERERLLAALE
                     VERARLKQVFQRAPSFIVAFRGADQVYEFVNEAYYQLVGHRDILGKPLLEAIPEIRGQ
                     GFVELLERVRQTGEPWVGRESPVELQRTPGAPLETRYLDMVFQALTEIDGTRTGVVAH
                     GSDVTEHVLARREIERLLEVSERARRDAEMARAEAEGASRAKGEFLAVMSHELRTPLN
                     AIGGYAELMEMGLRGPITPEQRTDLARIQASQRHLLGLINQVLNYTRIETGTVQYDLT
                     GVTVSEALAAAEALVIPQVRARGLRYVVGGCDPSLRVRADADKLQQILLNLLTNAIKF
                     TEGGGEVRVECHGTGDAAEIAVADTGVGIPADKLMSVFEPFVQVDQRLTRENEGVGLG
                     LAISRDLARGMGGDLKAESTLGVGSRFVLRLPTAE"
BASE COUNT          522 a         1275 c         1126 g          537 t
ORIGIN      
        1 tcgaacaacc gcagctcgcg cggcgtgagc tgcacctcgt cgcccgcgca ccacacgcgc
       61 cgcgcctcgc gatcgtagac gacgtcgcca tacgcgatgc gcagctgggc gctggcgatg
      121 cgtgctcggc gaaaggcggc ggtgatctgc gccgccacgt gggcccgcgg cgcaccggcg
      181 ggcaccgcat cgtcagcgcc ggcggcgagc gcctccacga tgtccgagca ttccacgcag
      241 cagatcccca ccgtgggcca gcgccgccgc gcgcggcgga tgaggtccgc gccggcgtcc
      301 tgctccgccg tgccttccac gagacagagg tcgatgaact cgcgcggcgt ctccggattg
      361 gcgtccggat cggagaaaca gacgacgtcc gcctggcccg gcggcagatg cgtcgccaga
      421 tccatgcacc gttcctcatt actgcccagc acgagcacgg tcagtggaat cgtcagctcg
      481 gacgtcatcg tctgagatat atgggtgggc cgtgcaattc gtatggggac gagagagata
      541 ccgcagggcc cgccatcccg caaacattag aaattgctca tgttgggggg caatcgtctt
      601 ccggtgcgcc cccccgcact cacccgcgcc cacaggacga tgcgccgtct atccgctgcc
      661 ctctccctcg ctctcgcgct cgccgtcacc ggctgcatcc gggacgtcgc gatgatctcg
      721 ggacccggca ccaaggcctc cggcggcgcc gacggaatcg ccggcgccta cgtcctccag
      781 acggtgaacg ggcagcccct tccgtacacg taccggacct ccggcgccga cacgtacgtg
      841 atcatggacg ccaccgtgac gatgaccgcc accggccagt ggaccgaagt ctggcacgag
      901 cggcagacgg tggccggcgt ggtcacactc aagaccttca ccgatccggg caccttcacg
      961 atcacgggga cgaagatcac cgtcacgatc gtcaacggca gctcgggctc gggcaccttc
     1021 gatgggacgt acgcgagcgg tacgctcacg ctccccgggc aatcgacgcc cggcggaccg
     1081 atcgagacga tggtctacac gaagtagcgc ggcccgccgg tcgacggcgc ggtcattccg
     1141 ccgtcggcag gcgcagcacg aaccggctcc cgactcccag ggtgctttcc gccttgaggt
     1201 cgccgcccat cccgcgcgcg agatcgcggc tgatcgccag cccgagcccc accccctcgt
     1261 tctcgcgcgt gagccgctgg tccacctgca cgaacggctc gaacaccgac atcagcttgt
     1321 cggccgggat gccgaccccg gtgtcggcca cggcgatctc ggccgcgtcg cccgtgccgt
     1381 ggcactccac gcgcacttcg cctccgcctt cggtgaactt gatggcgttg gtgagcaggt
     1441 tcagcaaaat ctgctgcagc ttgtccgcgt cggcgcgcac gcgcagcgac ggatcgcagc
     1501 cgcccaccac gtagcgcagc ccgcgggcac gcacctgcgg gatcacgagc gcctccgccg
     1561 ccgccagcgc ctcgctcacg gtgacgccgg tcaagtcgta ctgcacggtc cccgtctcga
     1621 tgcgcgtgta gttgagcacc tggttgatga gcccgagcag gtgccgctgg ctcgcctgga
     1681 tgcgggcgag atcggtgcgc tgctcggggg tgatcggccc acgcagcccc atctccatca
     1741 gctccgcgta cccaccgatc gcgttgagcg gcgtgcgcag ctcgtggctc atcacggcga
     1801 ggaattcgcc cttcgcgcgc gacgcgcctt ccgcctcggc gcgcgccatc tccgcgtcgc
     1861 gtcgcgcgcg ctcgctcacc tcgagcagcc gttcgatctc ccgccgcgcg agcacgtgct
     1921 cggtcacgtc cgagccgtgg gcgacgacgc cggtgcgcgt gccgtcgatc tcggtgagcg
     1981 cctggaacac catgtcgaga tagcgcgtct ccagcggagc gcccggcgtg cgctgcaatt
     2041 ccaccggcga ctcgcgcccc acccacggct ctccggtctg gcgcacgcgc tcgagcagct
     2101 cgacgaatcc ctgcccgcgg atctcgggaa tcgcctcgag cagcggcttg ccgaggatgt
     2161 cgcgatggcc gacgagctgg tagtacgcct cgttcacgaa ctcgtacacc tgatccgcgc
     2221 cacggaaggc gacgatgaag ctcggagcgc gctggaacac ctgcttgagc cgcgcgcgct
     2281 ccacctcgag cgccgccagc agacgctcgc gctcctgctt cgccgcccgc tccgccgtga
     2341 tgtcgttgaa caggatggcg acgaggtgat cgtcgggcgc gccgatgcgg aaggcgtatg
     2401 catcgtagta ccggttgagc gccgccgacg gcgcctcgaa ccgtgtcgcc tcgccggtga
     2461 gcgcgacctt tccatagatg tcgaaccaga actcctcgat gttcggagcc agctcgcgga
     2521 tcgtcctgcc caccggatcg gcgagcccgg tctgcgccac gaacgccgga ttcgcctcgg
     2581 tgaagcggta gtccagcgcg cgccccgcct cgtcgaactg cacctcgatc acgcagaacg
     2641 cttcgtcgag cgaattgaac agcatgcggt accgcgactc gctctcgcgc agcctcgcct
     2701 cggtgcgcac gcgctccgac acctcgcgcc agaagacggc catgcccccg tcgtcggtgg
     2761 gataggcgtc gatctcgagg tgccggtcgt actgctcgcc cacgtagtgg tgcgtgatgt
     2821 gcgcctccac ccgctcggcc atcacgcgcc ggtacgtctc ttccaccttc gtgccaagcg
     2881 acgcggggaa cgcctcccag tgggtgagcc cgatcagccg ttcgcgcgcc acgccgaggt
     2941 tgcgctcggc cgacgcgttg agggtgagga tacggaagtt cgcgtccatc gtgaggtgct
     3001 cgtcggccac ctgctccagc acgcgcgccg cgcgccgctc cacgcgcgcc gtctccgcca
     3061 gcaaccgctc ccgctcgcgt tcggccagca tgcgcgacgt gacttcctga cacacgacga
     3121 gggtgccgcc gatcgcgccg tcgtcgtcga acaccgggct gtagccgtac gtccaccaca
     3181 cttcctcgag ccggccgttg cgctcgatgg gaaggaactg gtcctcgtgc caggtgggct
     3241 cgccggtggt catcacctgg tggatctgcg gcccgatctc gtgccagatg tcggtccaga
     3301 actcgcgccc cttggcgcca agggcgccgg ggtgccgcgc gccatgtccg aggctcgggc
     3361 gataggcgtc gttgtagagc tgcacgagct cggggcccca ccagaggaac atcgggttgc
     3421 gcgaggcgag cacgatgccg acggtggtgc gcagggcatg
//
LOCUS       DASSYW010000338         2455 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_996252, whole genome shotgun sequence.
ACCESSION   DASSYW010000338 DASSYW010000000
VERSION     DASSYW010000338.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2455)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2455)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2455
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_996252"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1478)
                     /locus_tag="VFN38_05405"
     CDS             complement(<1..1478)
                     /locus_tag="VFN38_05405"
                     /inference="COORDINATES: protein motif:HMM:NF014805.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin carboxylase N-terminal domain-containing
                     protein"
                     /protein_id="HET9011229.1"
                     /translation="MFSKVLIANRGAIACRIIRTLRRMGVSPVAVYSDADRHAAHVAQ
                     ADAAVRLGPPAAVESYLQQDAIIGAALRSGAQAIHPGYGFLSENAGFVEACERAGLVF
                     LGPTPAQMRALGLKHTAREIAEREGAPLLPGTGLLIDETHALDEAERCGYPVILKSTA
                     GGGGIGMRVCRRPEELGQHFAAVARLGAANFGQGGVYLERFVERARHIEVQIFGDGVG
                     GVVSLGERDCSAQRRNQKVVEETPAPGLRDDVRRRLWDTAELLARAVKYRSAGTVEFL
                     YDSDHEDFFFLEVNTRLQVEHGVTEAVTGVDIVDWMVRLGAGTLPPLDTLRVQPSGAS
                     IQVRVYAEDPAHDFRPSTGQLTDVRLPHGVRCDTWVERGTEVTPYYDPMLAKIIVRGA
                     TRAEAMARLETALAETSFAGLETNLDYLRQIVVEPEFRAGGFPTSFLSRVRYQPRAFE
                     VLDPGMQTTVQDYPGRTGFWHVGVPPSGPMDPLAFRLVNRLVG"
     gene            complement(1478..2110)
                     /locus_tag="VFN38_05410"
     CDS             complement(1478..2110)
                     /locus_tag="VFN38_05410"
                     /inference="COORDINATES: protein motif:HMM:TIGR03424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urea amidolyase associated protein UAAP2"
                     /protein_id="HET9011230.1"
                     /translation="MTESALDPSTAVYDATVLAGDPWIHEIRKGQTVRILDLEGNQAA
                     DTLFYNAHDYEDRYSAQDTIREQGNIYLTTGTQLRSLKGHTLLTIVADTCGRHDTLGG
                     ACATESNMVRYAIEKRHMHACRQSFVKAITEWGRGLEKRDIGHNINFFMNVPVTPEGR
                     LTFEDGVSAPGKYVEMRAEMDVLALVSNCPQLNNPCNAYNPTPIRVFIWD"
     gene            complement(2140..>2455)
                     /locus_tag="VFN38_05415"
     CDS             complement(2140..>2455)
                     /locus_tag="VFN38_05415"
                     /inference="COORDINATES: protein motif:HMM:NF020905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF1989 domain-containing protein"
                     /protein_id="HET9011231.1"
                     /translation="YGMTARDLPAPVNFFSRVVVNETGAMTFVPGHSRAGDAVELRAE
                     MNVLVVLNTCQHPLDPNPRYEPKPVALSVRRVPPPGPDDLCRTSRPENERGFILTERY
                     FL"
BASE COUNT          375 a          852 c          832 g          396 t
ORIGIN      
        1 cccaccagcc ggttgaccag ccggaacgcc agcggatcca tcggtccgga cggcggcacg
       61 ccgacgtgcc agaaccctgt ccggcccgga tagtcctgca cagtcgtctg catcccgggg
      121 tcgagcactt cgaacgcgcg cggctgatac cggacgcggc tcaggaagct cgtgggaaaa
      181 ccaccggcgc ggaattcagg ctcgacgacg atctggcgca ggtagtcgag attcgtctcc
      241 agccctgcaa aggacgtttc ggccagcgcc gtttcgaggc gcgccatcgc ctcggcgcgc
      301 gtggcgccgc ggacgatgat cttggcgagc atcgggtcgt agtacggcgt cacctcggtg
      361 ccacgctcca cccacgtgtc gcagcgcaca ccatggggca gccgcacgtc ggtgagctgc
      421 cccgtgctcg gacggaagtc gtgcgcgggg tcttcggcgt acacccgtac ctgaatcgag
      481 gcgccggacg gctggacgcg cagcgtgtcg agcggcggca gcgtgccggc gcccaggcgc
      541 accatccagt ccacgatgtc cacgcccgtc accgcctcgg tgacgccgtg ctccacctgc
      601 aggcgcgtgt tcacttcgag gaagaagaag tcctcgtggt ccgagtcgta caggaactcc
      661 acggtgccgg cggaccggta cttcaccgcg cgggccagca gctcggcggt gtcccacaga
      721 cgccggcgca cgtcgtcgcg aaggccgggc gcgggcgttt cttcgaccac cttctgattg
      781 cgccgctgcg ccgagcagtc acgctcgccg agcgagacga cgccgccgac gccgtcgccg
      841 aagatctgca cctcgatgtg gcgggcccgc tcgacgaatc gttcgaggta cacgccgccc
      901 tgaccgaagt tggcggcgcc caggcgagcc accgccgcga agtgctgccc gagctcctcc
      961 ggcctgcggc acacgcgcat gccgatgccg ccgccgcccg ccgtgctctt caggatcacc
     1021 gggtagccgc agcgctcggc ttcgtccagc gcatgcgtct cgtcgatgag cagccccgta
     1081 ccggggagga gcggcgcacc ctcgcgctcg gcaatctcgc gcgcggtgtg tttgaggccg
     1141 agcgcccgca tctgcgccgg cgtcggtccg agaaacacga ggccggcgcg ctcgcacgcc
     1201 tccacgaagc cggcgttttc gctcaggaag ccgtagccgg gatggatggc ctgcgcgccg
     1261 ctacggagcg ccgcgccgat gatcgcgtcc tgctgcaggt agctctcgac agcagctgga
     1321 ggaccgaggc gcaccgcggc gtccgcttgc gccacgtgcg ccgcgtgccg gtcggcgtcg
     1381 gagtagacgg ccaccggcga cacgcccatc cgccgcagcg tcctgatgat ccggcaggcg
     1441 atggcgccgc ggttggcgat gagaaccttg gagaacatca gtcccagatg aacacccgga
     1501 tcggcgtcgg gttgtaggcg ttgcaggggt tgttcaactg cgggcaattg ctgacgagcg
     1561 ccagcacgtc catctccgcc cgcatctcca cgtatttgcc gggcgccgag acgccgtcct
     1621 cgaacgtcag gcgcccttcc ggcgtcaccg ggacgttcat gaagaagttg atgttgtggc
     1681 cgatgtcccg cttctcgagg ccgcggcccc attccgtgat cgccttcacg aaactctgac
     1741 ggcacgcgtg catgtgccgc ttctcgatcg cgtagcggac catgttgctt tcggtcgcgc
     1801 acgcgccgcc cagcgtgtcg tggcggccgc aggtgtcggc cacgatcgtg agcagcgtgt
     1861 gccccttgag cgatcgcagc tgcgtgccgg tggtgaggta gatgttgccc tgctcgcgaa
     1921 tggtgtcctg cgccgagtag cgatcctcgt agtcgtgcgc gttgtagaac agcgtgtcgg
     1981 cggcctggtt cccttccaga tcgagaatcc ggacggtctg ccccttgcgg atctcgtgga
     2041 tccacggatc gccggccaga acggtggcgt cgtaaacggc ggtggaagga tcgagcgcgc
     2101 tctcggtcat cgtcgtagcc gccggtcttt agaccggcct cacagaaaat accgttccgt
     2161 caaaatgaac ccgcgctcgt tctccggccg cgacgtgcgg cacaggtcgt ccggaccggg
     2221 cggcgggacg cgacgcacgg acaacgcgac cggcttcggc tcgtagcgtg gattgggatc
     2281 gagcgggtgc tggcacgtgt tcaggacgac gagcacgttc atctcggcgc gcagctccac
     2341 ggcgtcgccc gcccgcgagt ggcccggcac gaacgtcatc gccccggtct cgttgaccac
     2401 cacacggctg aagaagttca ccggcgccgg caggtcgcgc gccgtcatgc cgtat
//
LOCUS       DASSYW010000339         2097 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_769501, whole genome shotgun sequence.
ACCESSION   DASSYW010000339 DASSYW010000000
VERSION     DASSYW010000339.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2097)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2097)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2097
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_769501"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..538
                     /gene="mraW"
                     /locus_tag="VFN38_05420"
     CDS             <1..538
                     /gene="mraW"
                     /locus_tag="VFN38_05420"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: protein motif:HMM:NF013919.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="16S rRNA
                     (cytosine(1402)-N(4))-methyltransferase"
                     /protein_id="HET9011232.1"
                     /translation="TRTAAELLNDADEGELMTVFREYGDEPKAGRLAREVVRRRATRP
                     FVTSDDLVGAIRGALGPRSGAPEFARLFQAVRIAVNDELTGLERALPALRDRLAPGGV
                     LAIMSYHSGEDRLVKHAFREWSEDCVCPPKHPMCTCGGGHALGVVLTKRAIVASPEEV
                     AHNPRARSAKLRAWRRAE"
     gene            520..831
                     /locus_tag="VFN38_05425"
     CDS             520..831
                     /locus_tag="VFN38_05425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011233.1"
                     /translation="MAKGRVAGKGRGRLRFVLVLLGFLVIAVGVILRRSYGIAPAREI
                     QELDTRRAALVAERLRLEGEVRAAASRATLQPIAEQRLRMRVPADSQVIILPRTANER
                     P"
     gene            818..>2097
                     /locus_tag="VFN38_05430"
     CDS             818..>2097
                     /locus_tag="VFN38_05430"
                     /inference="COORDINATES: protein motif:HMM:NF013100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /protein_id="HET9011234.1"
                     /translation="MKGPSRVGLVHLGLAVFALAVIGKSAKVQLWQGRTWAASALRQQ
                     STERVIPAPRGEILDAAGETLAQSRETVKLDVAPQELKNRRALREALAAAGVPAPMVA
                     RAVDPTRKWVELPGRYVASSVAKISAMRGVYTTPVIERAYASSDGLRRIIGRVDADGR
                     AVDGVELALDSILRGVPGSATVMRDARGRKFESPAAGGTAPVSGHTVMLTINHELQEI
                     AERALADAVSRMSAEGGDVVVLDPAGGEILAMASQRQDPRFTAATALTEPYEPGSTIK
                     PFIAATLLEKGRARESDVVNTFNGQLTINGRTINDEHRAARLNLAEVLRWSSNIGIVQ
                     FAERLSPREEFEALRDFGFGTATGVPYPVEASGTLREPARWSTQSGNSMAMGYEVAVT
                     PLQLAAAYVALANDGELLEPALVKEVRAPDGRVL"
BASE COUNT          294 a          732 c          803 g          268 t
ORIGIN      
        1 gacgcgcacg gccgcggagc tgctcaacga cgccgacgag ggcgagctga tgacggtgtt
       61 ccgcgaatac ggcgacgagc cgaaggcggg gcgtctggcg cgcgaggtcg tgcgccggcg
      121 tgcgacccgt ccgttcgtca cgagcgacga cctggtcggg gcgatccgcg gcgcgctcgg
      181 accgcgctcg ggcgcgcccg agttcgcccg cctcttccag gcggtgcgga tcgccgtgaa
      241 cgacgagctg acggggctcg agcgcgccct gcccgccctc cgggaccggc tggcgccagg
      301 cggcgtgctc gcgatcatgt cctatcactc gggggaggac cgcctcgtga agcacgcctt
      361 ccgggagtgg agcgaggact gcgtgtgccc gccgaagcac ccgatgtgca cctgcggcgg
      421 cgggcatgcc ctcggcgtcg tcctcacgaa gcgggcgatc gttgcgtcgc ccgaggaagt
      481 ggctcacaac ccgcgcgccc gcagcgcgaa gctccgcgca tggcgaaggg ccgagtagcc
      541 ggcaaggggc gggggcggct gcgcttcgtc ctggtgctcc tcggtttcct cgtcatcgcc
      601 gtaggcgtca tcctgcggcg cagctacggc atcgcgccgg cgcgcgagat ccaggagctc
      661 gacacccggc gggcggcact cgtggccgaa cggctgcggc tcgagggcga ggtccgcgcc
      721 gcggcgagcc gcgccaccct ccagccgatc gccgagcagc gactccgcat gcgcgtcccc
      781 gccgacagcc aggtcatcat cctcccacgc accgcgaatg aaaggcccta gccgcgtcgg
      841 gctcgtgcac ctggggctgg ccgtgttcgc cctcgcggtg atcggcaagt ccgccaaggt
      901 gcagctctgg caggggcgca cctgggcggc cagcgcgctg cggcagcaga gcacggagcg
      961 ggtgatcccc gcgccgcgcg gcgagatcct ggacgccgcc ggcgagacgc tcgcccagag
     1021 ccgcgaaacg gtgaagctgg acgtggcgcc gcaggagctg aagaaccggc gcgcgctgcg
     1081 ggaggcgctc gccgccgccg gcgtgccggc gccgatggtc gcgcgcgccg tggacccgac
     1141 cagaaagtgg gtggagctgc cgggtcggta cgtcgcctcc agcgtggcga agatctcggc
     1201 gatgcgcggc gtgtacacca cgccggtcat cgagcgggcg tacgcctcga gcgacggatt
     1261 gcgccggatc atcggccgag tggatgccga cgggcgcgcc gtggacggcg tggagctggc
     1321 gctcgactcc atcctgcgcg gggtgcccgg ctcggcgacg gtgatgcgcg acgcccgcgg
     1381 ccggaagttc gagtcgccgg ccgcgggcgg cacggcgccg gtcagcggcc acaccgtgat
     1441 gctcacgatc aatcacgagc tgcaggagat cgccgagcgc gccctcgccg acgcggtgtc
     1501 gcggatgagc gcggagggcg gcgacgtcgt ggtgctcgat ccggccggcg gggagatcct
     1561 cgccatggcg agtcagcggc aggatccgcg cttcaccgcc gcgacggcgc tgaccgagcc
     1621 gtacgagccg ggatccacga tcaagccgtt catcgccgcc acgttgctcg agaaggggcg
     1681 cgcgcgcgag tcggacgtgg tgaacacctt caacggccag ctcacgatca acgggcggac
     1741 gatcaacgac gagcatcgcg ccgcccggct caacctggcc gaggtgctcc ggtggtcgag
     1801 caacatcggc atcgtgcagt tcgccgagcg gctctcgccg cgcgaggagt tcgaggcgct
     1861 gcgcgacttc ggcttcggca ccgcgacggg cgtgccctat ccggtggagg cgtcgggcac
     1921 gctgcgcgag ccggcgcgct ggtcgacgca gtcaggcaac tcgatggcga tgggctacga
     1981 agtggccgtg acgccgctgc agctcgcggc ggcgtacgtg gccctggcca atgacggcga
     2041 gctgctcgag ccggccctgg tgaaggaggt ccgtgcgccc gacgggcgcg tgctcta
//
LOCUS       DASSYW010000340         2072 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_934533, whole genome shotgun sequence.
ACCESSION   DASSYW010000340 DASSYW010000000
VERSION     DASSYW010000340.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2072
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_934533"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..280
                     /locus_tag="VFN38_05435"
     CDS             <1..280
                     /locus_tag="VFN38_05435"
                     /inference="COORDINATES: protein motif:HMM:NF013626.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="PUA domain-containing protein"
                     /protein_id="HET9011235.1"
                     /translation="LSGGRVSLLPGGVLGADGEFHRGDLVEIVDADGTAVARGLSQYG
                     AAEVRRLAGRHSREIDGVLGYSYGDEVVHRDDLVGMNRPVASGQEINA"
     gene            277..1539
                     /locus_tag="VFN38_05440"
     CDS             277..1539
                     /locus_tag="VFN38_05440"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: protein motif:HMM:TIGR00407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004350 - glutamate-5-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HET9011236.1"
                     /translation="MSTIREQALACRDAARVVAALGSEAKRALLRDMAAALEAQSAAV
                     LAANAEDMRQAAAKGVQGAMLDRLRLDEARVAGIAGALREVAELPDPVGVTTRRETRP
                     NGLLVERVRIPLGVIAMIYEARPNVTADAAALCLMAGNGVILRGGSEAIHSNLAIAAA
                     LHAALRAHGVAEAAVTVLQDLGREAMVELLQLSDLVDLAIPRGGEGLIRFVAEHARVP
                     VIKHYKGVCHLYVDRAADPDLALNLLLDGKTSRPGVCNALETLLVHRDVAAAFLPRAV
                     AALRERGVELRGDECSRALVSDMHAATEDDYAAEFLDLILAVRVVDDLDAAIAHIRRY
                     GSDHTEVIATADQAAAQRFVQAIRSAVVMVNASSRFSDGGELGLGAEIGISTTRLHAY
                     GPMGAEALTVERFVVRGEGQVRHAQSWV"
     gene            complement(1717..>2072)
                     /locus_tag="VFN38_05445"
     CDS             complement(1717..>2072)
                     /locus_tag="VFN38_05445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011237.1"
                     /translation="ALHTRAITYTLQTLVEQGLSLLARRLQADGLELAAGVSHFTQQL
                     RFGAPNVAAQLLAELGVRHRRAYVALGNAIIQLAPPDFTNIKANAREGLRQHEVDWRA
                     YLGDLVYANTLKDLA"
BASE COUNT          320 a          720 c          734 g          298 t
ORIGIN      
        1 cttgagcggc ggccgcgtct cgctgctgcc gggcggcgtg ctcggcgccg acggcgaatt
       61 ccatcgcggc gacctggtgg agatcgtcga cgcggacggt accgccgtcg cgcgcggact
      121 cagccagtac ggcgccgccg aggtacgccg gctggccggc cggcacagcc gcgagatcga
      181 cggcgtgctc ggctacagct acggcgacga ggtggtgcac cgcgacgacc tcgtcggcat
      241 gaaccgcccg gttgcgtccg ggcaggagat caacgcatga gcacgatccg cgaacaggca
      301 ctggcttgcc gcgacgccgc ccgggtcgtg gcggcgctgg gcagcgaggc gaagcgtgcg
      361 ctgctgcgcg acatggccgc ggcgctggaa gcgcagtccg ccgcggtgct ggccgccaac
      421 gccgaggaca tgcgccaggc cgcggcgaaa ggcgtgcagg gcgccatgct cgaccggctg
      481 cggctggacg aggcgcgcgt ggccggcatc gccggcgcgc tgcgcgaggt cgccgaactg
      541 cccgatccgg tcggcgtgac cacccgccgc gagacacggc cgaacgggct gctggtcgag
      601 cgcgtgcgta tcccgctcgg cgtgatcgcg atgatctacg aggcgcgccc caacgtcacc
      661 gccgacgccg cggcgctgtg cctgatggcg ggcaatggcg tgatcctgcg cggcggctcc
      721 gaggcgatcc attccaacct cgccatcgct gccgcgctgc atgccgcact gcgcgcgcac
      781 ggcgtagccg aggcggcggt gacggtgctg caggatctcg gccgcgaggc gatggtcgag
      841 ctgctgcagc tcagcgacct cgtcgacctg gccatcccgc gcggcggcga aggcctgatc
      901 cgcttcgtcg ccgaacacgc gcgggtgccg gtgatcaagc actacaaggg cgtctgccac
      961 ctgtacgtgg accgcgccgc cgaccccgac ctggcgctga acctgctgct cgacggcaag
     1021 acctcgcgcc ccggcgtgtg caacgcgctg gagacgctgc tggtgcatcg cgacgtggcc
     1081 gccgccttcc tgccacgcgc ggtggctgcc ttgcgcgaac gcggcgtcga actgcgcggc
     1141 gacgaatgca gccgcgcgct ggtatccgac atgcacgccg ccacggagga cgactacgcc
     1201 gccgaattcc tcgacctgat cctcgccgtg cgcgtggtcg acgacctcga cgccgccatc
     1261 gcccacatcc gccgctacgg ctccgaccac accgaagtca tcgccaccgc cgaccaagcc
     1321 gccgcgcaac gcttcgtgca ggcgatccgc tccgccgtgg tgatggtcaa cgcctcatcg
     1381 cgcttcagcg acggcggcga actcggcctc ggcgccgaaa tcggcatctc caccacgcgg
     1441 ctgcatgcct acgggccgat gggggccgag gcgctcacgg tggagcggtt tgtggtgcgt
     1501 ggggaagggc aggtgagaca tgcgcagagt tgggtgtaat gtcgggcgtc tgctatcggc
     1561 cagaagcaga cattcgcttg cgaattcttc aatagaatcg gccgaagcag cgctgccggc
     1621 ggcagtgcta cgcagtacgc gaaactgctt gaggccgaga cgtccttccg cgcgaaagcg
     1681 gctcgtaccc gtgaggggtg agccgagcca ctcggctcag gccaggtcct tgagcgtgtt
     1741 ggcgtagacc aggtcgccca aataggcgcg ccagtcgacc tcatgctggc gcagcccctc
     1801 gcgcgcgttg gccttgatat tcgtgaaatc cggcggcgcg agttgaatga tggcgttgcc
     1861 cagcgccacg taggctcgac ggtgacgcac gcccaactcc gcgagcaatt gtgcagcgac
     1921 attcggcgca ccaaagcgca gctgttgtgt gaagtgcgac acgcccgccg cgagttccag
     1981 gccatcggcc tgcaggcggc gcgcgagcag gctcaagccc tgctccacca gcgtttgcaa
     2041 ggtataggtg atcgcccgcg tgtggagggc ca
//
LOCUS       DASSYW010000341         2037 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1292999, whole genome shotgun sequence.
ACCESSION   DASSYW010000341 DASSYW010000000
VERSION     DASSYW010000341.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2037)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2037)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2037
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1292999"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1052)
                     /locus_tag="VFN38_05450"
     CDS             complement(<1..1052)
                     /locus_tag="VFN38_05450"
                     /inference="COORDINATES: protein motif:HMM:NF013117.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008381 - mechanosensitive monoatomic ion
                     channel activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HET9011238.1"
                     /translation="MTRLAGIDIAAAPAVVVPIFLLGLLVLSIVAARLARSAATRWLG
                     GPDGERADQTPAPSLGVPIGSAVLIGGMMLILPELTLPGRLGRWLAATFDIAFVLACA
                     LGLSRIVVAALSEYAARNPNVRPALGVARGIVRIAVAVLAAIMALESLGVPVAPLLTT
                     LGIGSLAVALALQETLANFFAGLHLLADRPVRPGDYIKIVDGAEGFVETISWRSSRLR
                     TTNNNIVIVPNQKLSQAILTNYHLPVSNVAMTVVMIVAAESDADAVEKAFHEELVRAV
                     AEVEELQGGKPTVRLNDVTDAGQIWHCVVDVRDVEAQKIAGHELRKRLLARLRREKIA
                     LAVKEKVFLLPERNQP"
     gene            1082..1435
                     /gene="queF"
                     /locus_tag="VFN38_05455"
     CDS             1082..1435
                     /gene="queF"
                     /locus_tag="VFN38_05455"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033739 - preQ1 synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preQ(1) synthase"
                     /protein_id="HET9011239.1"
                     /translation="MGTKPSKSLETFPNPKPERDYVIHFDCPEFTCVCPKTGQPDFAT
                     IRVEYVPDTLCVELKSWKLYLWSYRDEGAFHEAVTNRILDDLVAAVSPRRARVEGAFN
                     VRGGITTTIVAEFKK"
     gene            complement(1460..>2037)
                     /locus_tag="VFN38_05460"
     CDS             complement(1460..>2037)
                     /locus_tag="VFN38_05460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011240.1"
                     /translation="ANTDPSAATTPPPAESPPPTPALAAPGGLPPRAQVGPETGPTGP
                     SLWGVLPWGGYGIGARYMIPVPITQILTRTRFRDYWALEVGADLLHFSYDYGLGTSGF
                     SYSWTEVIPVVGMMWQVWLTDDFAVYPKVELGYAFGWYSDTNGMTTGLSGGNHFFPDG
                     TAGLLYRIGNGLTLRAEAGYVGGKAGIAWLF"
BASE COUNT          327 a          687 c          719 g          304 t
ORIGIN      
        1 tgaggctggt ttctttcggg tagcaagaaa accttttcct tcacggccag ggcgatcttc
       61 tcccggcgca ggcgcgcgag caggcgcttg cgcagctcgt gaccggcgat cttctgcgct
      121 tccacgtccc tgacgtcgac gacgcagtgc cagatctgcc cggcgtcggt gacgtcgttc
      181 agtcggacgg tgggcttgcc gccctgtagc tcctcgactt cggcgacggc ccggaccagc
      241 tcttcgtgga aggccttctc gaccgcgtcg gcgtccgatt cggccgccac gatcatgacg
      301 accgtcatcg cgacgttgga aaccggcaaa tggtagttgg tcaggatcgc ctgcgacagc
      361 ttctggttcg ggacgatcac gatgttgttg ttcgtcgtcc gcagccgcga cgagcgccag
      421 ctgatggtct cgacgaaccc ctcggcgccg tcgacgatct tgatgtaatc gcccgggcgg
      481 accggccggt cggccagcag gtgcaggccg gcgaagaagt tggccagcgt ctcctgcagc
      541 gccagcgcga ccgccagcga cccgatgcca agcgtggtca gcagcggcgc caccggcacg
      601 cccagcgact ccagcgccat gatcgcggcg aggacggcga ccgcgatgcg cacgatgccg
      661 cgggcgacgc cgagggcggg ccggacgttg gggttgcgcg cggcatactc gctcagcgcg
      721 gcgaccacga tgcgcgacag ccccagcgcg caggcgagca cgaacgcgat gtcgaaggtg
      781 gctgcaagcc agcgccccag gcgtcccggc aacgtcagct cggggaggat cagcatcatg
      841 ccgccgatca gcaccgcgct gccgatcggc acgcccagtg acggcgcggg cgtctggtcg
      901 gcgcgctcgc cgtccgggcc gccgagccag cgggtggccg cgctgcgcgc caggcgggcg
      961 gcgacgatcg acagcaccag cagcccgagc aggaagatcg gcaccacgac cgcgggcgcc
     1021 gcggcgatgt cgattcccgc caacctggtc atgggctgtc gtatatcctt tttcgcttcc
     1081 gatgggcacc aagccgagca agtcgctgga gacgttcccc aacccgaagc cggagcgcga
     1141 ctacgtgatc cacttcgact gccccgagtt cacctgcgtg tgcccgaaga ccgggcagcc
     1201 ggacttcgcg accatccggg tggagtacgt gcccgacacg ctgtgcgtcg agctgaagtc
     1261 ctggaagctg tatctctggt cgtaccgcga cgagggcgcg ttccacgagg cggtcaccaa
     1321 ccggatcctc gacgacctgg tggccgcggt cagcccgcgg cgcgcgcgcg tcgagggggc
     1381 cttcaacgtg cgcggcggca tcacgacgac gatcgtcgcc gagttcaaaa aatagcgatc
     1441 gcgtcgggtt ccgactgaat cagaacagcc aggcgatgcc ggccttgccg ccgacgtagc
     1501 cggcctcggc gcgcagggtg aggccgttgc cgatcctgta aagcaggccg gcggtgccgt
     1561 cggggaagaa atggttgccg cccgagaggc cggtcgtcat cccgttcgtg tccgagtacc
     1621 agccgaacgc gtagccgagc tcgaccttcg ggtagaccgc gaagtcgtcg gtcagccaca
     1681 cctgccacat catgccgacg accgggatga cctcggtcca gctgtagctg aacccgctgg
     1741 tgccgaggcc gtagtcgtag ctgaagtgca gcagatcggc gccgacctcc agcgcccagt
     1801 agtcacggaa ccgggtgcgg gtgaggatct gcgtgatcgg gaccgggatc atgtagcgcg
     1861 caccgatgcc gtagccgccc cagggaagga cgccccagag cgacggtccg gtcggccccg
     1921 tttccggacc gacctgcgcg cgcggaggca ggccgccggg agcggcgagc gccggcgtcg
     1981 gcgggggcga ttcggcgggg ggcggcgtcg tggccgccga cggatcggtg tttgcgg
//
LOCUS       DASSYW010000342         2196 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1599563, whole genome shotgun sequence.
ACCESSION   DASSYW010000342 DASSYW010000000
VERSION     DASSYW010000342.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2196)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2196)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2196
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1599563"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1181
                     /locus_tag="VFN38_05465"
     CDS             <1..1181
                     /locus_tag="VFN38_05465"
                     /inference="COORDINATES: protein motif:HMM:NF024829.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HET9011241.1"
                     /translation="TSPPAWAARSLATILIVLFIVLFAALFVVRVPETVWATFVVKPV
                     QGSDPVRTLHEGTVDKVNVADAQQVDNGAVLFVIASEPVADRASERQTLDARLSGGRS
                     RLGNEQQKFDNQARADAQERDRLEQRGVNIQRQVTLKEQELATAQDIAARARRSFEEG
                     VGTAQEASQKKLDADRVAVEVEQLRAEATDTRNALGRLGFEMASRRAAYAELQRGIGE
                     DLSTYRARKGMLERDRSRDGNAIQVSAPCAGTIVKLYVRSPGAIVHEGDVLADVVCSG
                     DKLEAELRLPERGLALVRQGHGVKLLYDAFPYERYGVQYATLRWLSPTSTVEPQGPVF
                     RALADISSDTVGVQGLRRPVLPGMTGRAAVIVGRRSLASYAIEPLRQIRESMSAGPGQ
                     "
     gene            1191..2177
                     /locus_tag="VFN38_05470"
     CDS             1191..2177
                     /locus_tag="VFN38_05470"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HET9011242.1"
                     /translation="MAAPVHSYDDTDATLADFCSDDAAMQACLERARMAAKTDLPILI
                     LGESGTGKTILARAIHNSSARRARPFIAFNAAALSETLLDSQLFGHERGAFTGAQNRV
                     KGKFELANSGTLFLDEVADLSPSAQSKILRAVESGEFERLGSETLQRADVRLISATNH
                     PLSAAAGRNGFREDLFFRIAGITLTVPALRERPHDLPTLLVNEIARASQRHGTSIVGL
                     DREAANRLLTYPWPGNLRELSKVVQAAVALTTNEVIGVDQLLLAGAAPGSAEAARPAP
                     TSDRSLRHAVHRHISRVLDEVGGNKRRAARELGVSRATLERKLQEMAKASRR"
BASE COUNT          353 a          745 c          780 g          318 t
ORIGIN      
        1 acaccagccc gcccgcctgg gccgcgcgct cgctggcgac cattctgatc gtcctgttca
       61 tcgtcctgtt cgccgcgttg ttcgtggtcc gcgtccccga aacggtgtgg gcgacgttcg
      121 tggtgaagcc ggtgcaagga tcggatcccg tgcgcacgct gcacgagggc accgtcgaca
      181 aggtcaacgt cgcggatgcg cagcaggtgg acaacggcgc cgtgctgttc gtgatcgcgt
      241 ccgagccggt ggccgaccgc gcgtccgagc gacagacact ggacgcgcgg ttgtccggcg
      301 gccgcagccg gctcggcaac gagcagcaga aattcgacaa ccaggcgcgc gccgacgcgc
      361 aggagcgcga tcggctcgag cagcgcggcg tcaacattca gcgacaggtg accttgaagg
      421 aacaggaact ggcgacggcg caggacatcg cggcccgcgc ccgccggagt ttcgaggagg
      481 gagtcggcac cgcccaggag gcgtcgcaga aaaagctcga cgccgatcgc gtggccgtgg
      541 aagtcgagca gctccgggcg gaggcaaccg acacgcgcaa tgccctgggc cgcctgggat
      601 tcgagatggc ctcgcgccgc gcggcctacg ccgagctgca acgcggcatc ggcgaggacc
      661 tgtccacgta tcgcgcccgc aagggcatgc tcgagcgcga tcgctcgcgc gacggcaacg
      721 cgattcaggt gtcggcgccg tgtgccggga cgatcgtgaa gctctacgtc cgcagcccgg
      781 gcgccatcgt gcacgaaggc gacgtgctgg ccgacgtcgt ctgctcgggc gacaagctgg
      841 aggcggaact gcggctgccc gagcgcggcc tggcgctggt gcggcaggga catggcgtca
      901 aactcctcta cgacgcgttt ccctacgagc gctacggcgt ccagtacgcg acgctgcgat
      961 ggctcagccc gacgtcgacg gtcgagccgc agggtccggt gtttcgcgcc ttggccgaca
     1021 tcagctcgga cacggtcggc gtccagggcc tgcggcggcc ggtactgccc ggcatgaccg
     1081 ggcgcgccgc ggtgatcgtc ggccggcgct cgctggccag ctacgcgatc gaaccgctgc
     1141 ggcagatccg cgagtcgatg tcggccggcc cgggacaata gggaggatcg gtggctgcgc
     1201 ccgtccattc gtacgacgac accgacgcca cgctcgccga tttctgttcc gacgatgcgg
     1261 cgatgcaggc gtgcctcgag cgcgcgcgca tggcggcgaa aaccgatctg cccatcctca
     1321 tcctcggcga atcgggcacc ggcaagacga ttctcgcgcg agccatccac aactcgtcgg
     1381 cgcggcgcgc gcgtcccttc atcgcgttca acgccgcagc gttgagcgag acgctgctcg
     1441 acagtcagct gttcggccac gagcgcggcg cgttcaccgg cgcccagaat cgggtcaaag
     1501 gaaagttcga gctggccaac agcggcacgt tgtttctcga cgaggtggcc gatctcagtc
     1561 cctccgccca gagcaagatc ctgcgggcgg tcgagtcggg ggagttcgag cgtctgggat
     1621 cggaaacgct gcagcgcgcc gacgtccgcc tgatctcggc gacgaaccat ccgctgtcgg
     1681 cggccgccgg ccgcaacgga ttccgcgagg atctgttctt tcggatcgcc gggatcaccc
     1741 tgaccgttcc tgcactgcgc gagcggccgc acgatctgcc gacgctgctg gtcaacgaga
     1801 tcgcgcgcgc cagccagcgt cacggcacgt cgatcgtggg tctggatcgc gaagccgcga
     1861 accgtctgct gacctatccc tggccgggga acctgcgcga gctgtcgaag gtggtgcagg
     1921 cggcggtcgc gctgacgacc aacgaggtca tcggcgtcga ccagttgctg ctcgccggcg
     1981 cggcgcccgg atcagccgag gcggcccggc cggcgccgac gagcgatcgg tcgcttcgac
     2041 acgccgtcca ccggcacatc tcccgcgtgc tcgacgaagt cggcggcaac aagcggcgcg
     2101 cggcgcgcga gctcggagtg tcgcgcgcga cgctcgagcg gaagctgcag gagatggcga
     2161 aggcctcgcg gagataaagg atctgtgggt ctccga
//
LOCUS       DASSYW010000343         3655 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1128122, whole genome shotgun sequence.
ACCESSION   DASSYW010000343 DASSYW010000000
VERSION     DASSYW010000343.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3655)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3655)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3655
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1128122"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1109)
                     /locus_tag="VFN38_05475"
     CDS             complement(<1..1109)
                     /locus_tag="VFN38_05475"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HET9011243.1"
                     /translation="MKSGKFVEVDGRRFLIKGVAYGTFEPDADGSQFPPIQQVARDFA
                     LMAESGFNTVRTYTVPTGDLLDEAARHGLKVMAGIPWTQHVAFLDDAALARQIRRDTV
                     ASVKALASHPAALLFALGNEIPPAVVRWHGRRRIERFLRELYEDVKSAAPGSLLTYVN
                     FPPTEYLDTEIFDVCAFNVYLHRERDLRAYLARLQHLAGERPLLLAEAGADSIREGGD
                     GQAAITATHIRTAFAEGACGAIAFSWTDEWWRGGHTVSDWAFGLVDAERRPKPALAAV
                     RDAFADAPFSAAVRAAWPKVSVVVCAYNAADTIDDCLTSLGALTYPQFEIIVVNDGSR
                     DDTGARARGYAGVRVIDIPNGGLSAARNVGLAEATG"
     gene            1162..2115
                     /locus_tag="VFN38_05480"
     CDS             1162..2115
                     /locus_tag="VFN38_05480"
                     /inference="COORDINATES: protein motif:HMM:NF019241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HET9011244.1"
                     /translation="MTDPTPTIAAAHVHAFRDYRGRVHRLAEGLSDAQFWARPYPYGN
                     SLGHLTLHLTGNLQFYVGRHMAGTAYVRDREREFHDPAPPSKADALRRLDDAVDLVVA
                     TVERQTAADWSAPFEAPGADGIHDRFSMFLRAATHFHHHVGQMIYLAKEHARQRADKD
                     APARYAHTNLVARDWRALGRFYEHTLGCVPILPERDLSGEWLERGTGVPGARITGAHY
                     RMPGGGPSGPTLEIFQYHPPEDAPPPPANRVGFTHIAFAVAEVEAARAAVIAAGGQAA
                     GTVESIEIAGAGRITWTYVRDPEGNLIELQKRDEAGRSRPA"
     gene            complement(2066..2845)
                     /locus_tag="VFN38_05485"
     CDS             complement(2066..2845)
                     /locus_tag="VFN38_05485"
                     /inference="COORDINATES: protein motif:HMM:NF016908.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FkbM family methyltransferase"
                     /protein_id="HET9011245.1"
                     /translation="MSRRTVVLLLAVLIVIVGLGAKGYSSAEPFIKKFLANRECCAIP
                     LARNIAVTRAELRGERTYTGEIGQDKWVLETVFPDVTDGFFVDVGSGHGTIGSNSKML
                     ERAGWKGLCIDPFPVYMEGRTCQVFKEVVFSEAGKEMTFRAAKGLAGLEDTLGAWNTK
                     ARQAPAVQFTTTTLDSILMRGNAPPFVHFISLDIEGAEYEALKGFPFDRVRVGAWVIE
                     HNNEEPKRSDLKRLLESHGYVRSHTFKQDDFYLPRPASAAR"
     gene            complement(2842..3375)
                     /locus_tag="VFN38_05490"
     CDS             complement(2842..3375)
                     /locus_tag="VFN38_05490"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HET9011246.1"
                     /translation="MSRPFAFCPYCAAALTPSSGGRARARCPACGFTHYDNPVPVVSA
                     VVEHDGRVVLARNKAWPPTWYALVAGFLERDEAPDDAVRREVKEELGLDALSTQLIGI
                     YPFQRMNQVIMAYHVTATGPISLNDELVDYRLVDPSHCTAWRAGTGFALRDWLRSRGF
                     EPRMTDRPGEGDIEESR"
     gene            3457..>3655
                     /locus_tag="VFN38_05495"
     CDS             3457..>3655
                     /locus_tag="VFN38_05495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011247.1"
                     /translation="MLGRTADAVVAPPRQAGLAEAGGALPGDGLVEFALRVARGSTAE
                     RVAFHAGYRSVSADPGVDHVSV"
BASE COUNT          552 a         1253 c         1271 g          579 t
ORIGIN      
        1 ccggtggcct cggccaagcc gacgtttcgc gcggcgctca gcccgccgtt cgggatgtcg
       61 atcacgcgga cgcccgcata cccgcgggcg cgcgcgcccg tatcgtcgcg cgatccgtcg
      121 ttgacgacga tgatctcgaa ctgcgggtag gtgagcgcgc cgagcgacgt gaggcagtcg
      181 tcgatcgtgt cggcggcgtt gtaggcgcag acgaccaccg acaccttcgg ccacgccgcg
      241 cggaccgccg cgctgaacgg cgcgtcggca aaggcgtcgc gcacggcggc cagcgccggc
      301 ttgggccgcc gctccgcgtc caccaggccg aatgcccagt cgctcacggt atgaccgccg
      361 cgccaccact cgtcggtcca ggagaacgca atcgcgccgc aggccccttc cgcgaacgcg
      421 gtgcgaatgt gcgtggcggt gatggccgcc tgcccgtcgc ccccttcgcg gatgctgtcc
      481 gcgcccgctt cggcgaggag cagcggccgc tcgccggcca ggtgctgcag gcgcgcgagg
      541 taggcgcgca ggtcccgctc gcggtgcagg tagacgttga acgcgcagac gtcgaagatc
      601 tcggtatcga gatattcggt aggcgggaag ttgacgtagg tgagcaggct tcccggcgcg
      661 gccgacttca cgtcctcgta gagttcccgc aggaagcgtt cgatgcgccg ccggccgtgc
      721 caccgcacga cggccggagg aatctcgttg ccgagggcga agagcagcgc cgcggggtgt
      781 gacgcgagcg ctttcaccga ggcgaccgtg tcgcgacgga tctgccgcgc gagcgccgcg
      841 tcgtcgagga acgcgacgtg ctgcgtccag gggatgcccg ccatcacctt caagccgtgg
      901 cgtgcggcct cgtcgagcag atctccggtc ggcacggtgt acgtccgcac cgtgttgaag
      961 ccggattccg ccatcagcgc gaagtcgcgt gcgacctgtt ggatgggggg gaactggctg
     1021 ccgtcggcgt ctggttcgaa ggtcccgtac gccacaccct tgatgaggaa gcggcgtccg
     1081 tcgacttcga cgaacttgcc tgatttcaac aacttattac tatcttggcg ccgtgcaaca
     1141 cggccgtcaa ggacaggaat catgaccgac ccgaccccga caatagccgc cgcccacgtc
     1201 cacgcctttc gtgactaccg gggccgggtg caccggcttg ccgaggggct gtcggatgcg
     1261 cagttctggg cacgccctta tccctatgga aacagcctcg gccacctgac gctgcacctg
     1321 accggcaacc tccagttcta cgtgggccgg cacatggcgg gcacggccta cgtccgcgac
     1381 cgcgagcggg aatttcacga ccccgctccg ccgtcgaagg ccgacgcgct gcggcggctg
     1441 gacgacgccg tggatctggt ggtggccacc gtggagcgcc agacggccgc ggactggtcc
     1501 gcgccgttcg aagcgccggg cgccgacggc atccacgatc gcttcagcat gttcctgcgg
     1561 gccgccacgc actttcacca ccacgtcggc cagatgatct acctggccaa ggagcacgcg
     1621 cggcagcgcg cggacaaaga cgcgccggct cgctatgccc acaccaatct ggtcgcccgc
     1681 gactggcgcg cgctcgggcg gttctacgaa cacacgctcg gctgcgtgcc gattctcccg
     1741 gagcgcgatc tctcgggcga gtggctcgaa cgcggcaccg gcgtgcccgg cgcccgcatc
     1801 acgggcgcgc actaccgaat gcctggcggc ggaccctcgg ggccgacgct cgagatcttt
     1861 caataccacc cgccggagga cgcgccgccg ccgcccgcca atcgcgtcgg gttcacgcac
     1921 atcgcgttcg cggtcgccga ggtcgaggcc gcgcgggccg cggtgattgc ggccggcggt
     1981 caggccgccg gcaccgtgga gtcgatcgag atcgccggcg ccgggcggat cacgtggacc
     2041 tacgtgcgcg atcccgaagg caatctcatc gagctgcaga agcgggacga ggcaggtaga
     2101 agtcgtcctg cttgaaggtg tgcgatcgca cgtagccgtg cgactcgagc aggcgcttga
     2161 ggtcgctgcg cttcggttcc tcgttgttgt gctcgatcac ccacgcgccc acgcggacgc
     2221 gatcgaaggg gaaccccttg agcgcctcgt actcggcgcc ttcgatgtcc aggctgatga
     2281 agtgcacgaa gggcggcgcg ttgccgcgca tgaggatgct gtcgagcgtg gtggtggtga
     2341 actgcactgc gggcgcctgc cgcgccttgg tgttccaggc gcccagcgtg tcttcgagcc
     2401 ccgcgagccc cttcgccgca cggaaggtca tctccttgcc cgcctcgctg aagaccactt
     2461 ctttgaagac ctggcaggtg cgcccctcca tgtagacggg gaacgggtcg atgcagagcc
     2521 ctttccagcc ggcgcgctcg agcatcttgc tgttcgaccc gatcgtgccg tgtccggacc
     2581 cgacgtccac gaaaaagccg tcggtcacgt cggggaacac ggtttcgagc acccacttgt
     2641 cctgaccgat ctcgcccgtg taggtgcgct cgccgcgcaa ctcggccctg gtgacggcga
     2701 tgttgcgcgc gagcgggatg gcgcagcact cccggttcgc gaggaacttc ttgatgaacg
     2761 gttcggcgct cgagtagccc ttggcgccga ggccgacgat tacgatcaga acggcgagca
     2821 gtaggacgac ggtgcggcgg ctcatcgact ctcctcgata tcgccctcac ccgggcgatc
     2881 ggtcatccgc ggctcgaaac cgcggctgcg cagccagtcg cggagcgcga acccggtgcc
     2941 ggcgcgccag gcggtgcagt gcgacgggtc gacgagtcgg tagtccacga gctcgtcgtt
     3001 cagggagatg ggaccggtgg cggtcacgtg gtaggccatg atcacctgat tcatccgctg
     3061 aaagggatag attccgatca gctgcgtgga cagcgcatcg aggccgagct cctctttgac
     3121 ctcgcgtcgc accgcgtcgt cgggcgcctc gtcgcgctcg agaaacccgg cgacgagggc
     3181 ataccacgtc ggcggccacg ccttgttcct cgccagcacc acgcggccgt catgctccac
     3241 gacggccgag accaccggca ccgggttgtc gtagtgggtg aacccgcagg cggggcagcg
     3301 ggcgcgcgcg cgtccacccg agctgggcgt gagggcggcg gcgcagtagg ggcagaaggc
     3361 gaacgggcgg ctcaacgggg acaacctatc acttttcatt cccatttctg cccgttgcgg
     3421 gctttgccgc cggttgtcgc gttaagcggc atagggatgc tcggacgaac tgcggacgct
     3481 gtcgtcgccc cgccgcgcca ggccgggctg gccgaggcgg gcggagccct gcccggcgac
     3541 ggcctcgtgg agtttgccct gcgtgtggcg cggggcagca ccgccgagcg ggtggcgttt
     3601 cacgccggct accgctccgt gtcggccgac cccggcgtcg atcacgtctc ggtga
//
LOCUS       DASSYW010000344         2051 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_540358, whole genome shotgun sequence.
ACCESSION   DASSYW010000344 DASSYW010000000
VERSION     DASSYW010000344.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2051)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2051)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2051
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_540358"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1461
                     /locus_tag="VFN38_05500"
     CDS             <1..1461
                     /locus_tag="VFN38_05500"
                     /inference="COORDINATES: protein motif:HMM:NF018884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SpoIIE family protein phosphatase"
                     /protein_id="HET9011248.1"
                     /translation="RRQLDRRRDALAIVFLGALASTLISATIGAGTLVLSGAIGSDRL
                     LNAWAVWWTGDAMGVLTVAPFLLCLPLFWELPAWSPARWLEALTILGVAAVTITWATQ
                     SELSSLYLLPPIVGWAAWRLQLRGAAPTALLVSLIATWSATRAEGWFAHESVFERMFT
                     LQTFNACIALTSFFLAALVSERNRTASALEAATVELEDRVGRRTAELSAANARLLREV
                     RERFEAEEHLSQEEARARRGDEIAEMLQRSLLPERIPKIQALALAARYVPATSDVKVG
                     GDWYDVIQLPDGLIGLAIGDVAGHGLSAAATMGQVRMALRAHAVQDPSPVHVMSGVHR
                     LVAHLQMPEMVTLIYLVFGPATGTLRFTNAGHPPPLIFGGGESMYLEDGLAAPLGVTA
                     EPSFTETRQDMWAGSTLLLYTDGLVERRGESIQTGLDRLLRCAVGHEGADVDELCDDI
                     LSSLIEADHVADDIALLAMRPQSVAGEPLARPAPPH"
     gene            complement(1683..>2051)
                     /locus_tag="VFN38_05505"
     CDS             complement(1683..>2051)
                     /locus_tag="VFN38_05505"
                     /inference="COORDINATES: protein motif:HMM:TIGR01926.1"
                     /note="This protein belongs to a clade of uncharacterized
                     proteins related to peroxidases such as the
                     alkylhydroperoxidase AhpD; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxidase-related enzyme"
                     /protein_id="HET9011249.1"
                     /translation="RELIGVVVSSINSCVTCLIIHQHKLGKYIGDHGRARRIAVNYRT
                     VALSPHERAIADFAVKITEEPGKLAPADVEILRDVGLSDREIFYVIEIAAIYNLTNRL
                     MSAYGMRPDDEFMAETAPGG"
BASE COUNT          320 a          691 c          681 g          359 t
ORIGIN      
        1 cgtcggcagc tggaccgccg gcgggacgcg ctggccatcg tcttcctggg cgccctggcg
       61 agcactctca tcagcgccac gatcggcgcg ggaacgctgg tgctctccgg agcgatcggc
      121 tccgatcggc tgctgaacgc ctgggcggtg tggtggaccg gcgacgcgat gggagtcctg
      181 acggtcgccc cgttcctgtt gtgcctacct ctcttctggg agctccctgc ctggtcgcct
      241 gcgcgctggc tcgaggcgct gaccatcctc ggcgtcgccg cagtgacgat cacctgggcg
      301 acccagtccg agctttcgtc gctctacctg ctcccgccga tcgtgggctg ggccgcctgg
      361 cgactccagc tccgtggggc cgcaccgacc gctctcctgg tgtccctgat cgccacctgg
      421 tcggcgaccc gggccgaggg atggttcgca cacgagtcgg tgttcgagcg gatgttcacg
      481 ctccagacct tcaacgcctg catcgccctc acctcattct tcctcgccgc cctcgtcagc
      541 gagcgaaacc ggacggcgag cgctctggaa gccgcgacgg tcgagcttga ggaccgggtg
      601 gggcggcgta ctgcggaact gtccgccgcg aacgcgcggc tcctccggga ggtccgggag
      661 cgcttcgagg cagaggagca cctgagtcaa gaagaggcgc gggcacgccg gggggacgag
      721 atcgccgaga tgttgcagcg gagcctgctc cccgaacgga taccgaagat ccaggccctg
      781 gccctggccg cgcggtacgt gccggccacc tcggacgtga aggtgggagg tgactggtac
      841 gacgtcatcc agcttcccga cggactcatt gggctggcca tcggcgacgt cgccggccac
      901 ggcctctcgg cggctgcgac gatgggccag gtccgaatgg cgctgcgcgc gcacgccgta
      961 caggatccgt cgccggtcca cgtgatgagt ggcgtccacc gactcgtcgc gcacctccag
     1021 atgcccgaga tggtgaccct gatctacctc gtgttcggtc cggccaccgg aacgctgcgt
     1081 ttcaccaacg ccggacatcc gccgcctctg atcttcggcg gcggcgagag catgtacctg
     1141 gaggacgggc tcgcggctcc gctcggcgtg acggcggagc cgagcttcac ggagacaagg
     1201 caggacatgt gggccggatc gaccttgctg ctctacaccg acgggctcgt cgagcgtcgc
     1261 ggagagtcca tccagacagg gctcgaccga ctgctccggt gtgccgtcgg ccacgagggc
     1321 gctgacgtcg acgagctgtg cgacgacatc ctgtcctcgc tcatcgaggc cgatcacgtc
     1381 gccgacgaca tcgcactcct tgccatgcgt ccgcagtctg tggccggcga gccgctcgcc
     1441 cgccccgccc ctccccactg agacctggag gctcgcgaaa ccgcgccggg ctacgccagt
     1501 gactcctcga cgcctggggt cgcagcggag gaggagagcg acctcgtggt cgcgggcggt
     1561 gaggagtgcg atagcgagcg tggaagcccg tcgccacgat ctctactgtc cgtggtcgcg
     1621 cgcccgcgag cgatcgcggg tcatgccccg gcccccgggc gatgggaggg ttccacgaca
     1681 tgtcaaccgc ccggcgccgt ttcagccatg aactcatcgt ctggccgcat gccataggcg
     1741 gacatgagcc tgttcgtcaa gttgtaaatt gccgcgatct caatgacgta gaatatctct
     1801 cggtcgctga ggccaacatc tcgcaggatc tcaacatcag ctggtgccag cttgcctggt
     1861 tcctcagtga tcttcactgc aaagtctgcg attgcgcgct catgcgggga cagcgcaact
     1921 gttcggtaat tgaccgcgat acgacgggct cgaccatggt cgccaatgta cttaccgagt
     1981 ttgtgttggt ggatgatcaa gcacgtaaca catgagttta tggatgagac gacaactccg
     2041 atcaactcgc g
//
LOCUS       DASSYW010000345         3542 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_206105, whole genome shotgun sequence.
ACCESSION   DASSYW010000345 DASSYW010000000
VERSION     DASSYW010000345.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3542)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3542)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3542
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_206105"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..413
                     /locus_tag="VFN38_05510"
     CDS             <1..413
                     /locus_tag="VFN38_05510"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HET9011250.1"
                     /translation="LGIAINPYGALSRGLLSGHWSRERSAAGRDFRSHLPRFTGENLE
                     RNLALVQELRRIAEEKDATVAQLAVAWVLARGEDVVPLVGARTRAQLAESLGALDLAL
                     TGADLARIDAAVPAGAAKGARYDAGQMAMLDSER"
     gene            428..706
                     /locus_tag="VFN38_05515"
     CDS             428..706
                     /locus_tag="VFN38_05515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011251.1"
                     /translation="MTRQLLVAGPFVIAGVACFAAAVVHERRMHRHRQPGVTYAAATL
                     RRDGGWLRRELFTDEGLRHQRRASRFGLAGAACFIAFFIAWVAIGVAR"
     gene            complement(744..1328)
                     /locus_tag="VFN38_05520"
     CDS             complement(744..1328)
                     /locus_tag="VFN38_05520"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015325.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008752 - FMN reductase (NAD(P)H) activity
                     [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0052873 - FMN reductase (NADPH) activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent FMN reductase"
                     /protein_id="HET9011252.1"
                     /translation="MTGFTVGYFVGSLARASINRKLAVALTRLSPPQLQLREIPIGDL
                     PLYSYDYDADYPPAGKALKDAIGSVDAVLFVTPEYNRSIPGALKNAIDWASRPWGTNS
                     FARKPSAIIGASPGKIGTAVGQQHLRSILAFCNSPLMNAIEAYIEFTPGLITDDGEVT
                     VDSTRDFLTKYMEEFHGFITRVFTALPRTAGAAR"
     gene            complement(1424..>3542)
                     /locus_tag="VFN38_05525"
     CDS             complement(1424..>3542)
                     /locus_tag="VFN38_05525"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HET9011253.1"
                     /translation="RAIHALDANVQVIAVTSPDAVAAVRRALLYAPGLGEVWLASPGE
                     VGSALAERAAGVTRQRRSFERTRARIARERHAESPQRTARALISDAYLAGLLRVLPDA
                     VFSVDALGRVLSANVAAEQMFAPTDGGSVVGAHLADALGLTPADWARGDGAALLARAA
                     LEGVIDVGFRAADGTSGVGELRAIPVRRGDGSSADDAAGATAWAVVLHDVTEQRATHD
                     QLRDSAVELEAQTEELQATLDALAERTTEAERLRGLADIARAAAESASRARSDFLATM
                     SHEIRTPINAIVGYTQLLDLGVPDPASPAQRAQIGRIMSAARHLLGLVDDVLDVAKVD
                     AGEMRVAREHAQLDRVIVDALAIARPLAQEREIRITERCDGGDLAYVGDEARVRQILV
                     NLLSNAVKFTAPGGAIVVSCGGAPVTAAGARVEGAGPWAFVRVADTGIGIAPDQQAAV
                     FEPFVQAERGHTRTKGGTGLGLTISRRLARLMGGDLTLESVVGTGTTFTLWLPATDTA
                     APGPTETPSTRAERAGLPGTGWRVHGLAEIGRALREEIDGILEAYVDRLRADATVPEA
                     RATGQAQLEDHAFSLLADMAQSLVIMDAAGDDAATLLADGTAIQRMIAEAHGARRFAQ
                     GWTETALFRDHAALHEATERAVTARVATRAGDVSEALRVLAHLGNRTTAISLAAYRHA
                     RSRAERKDAPVPPDATRRGPSSA"
BASE COUNT          442 a         1272 c         1337 g          491 t
ORIGIN      
        1 agctcgggat tgcgatcaac ccgtacggcg cgctctctcg cggcttgctc agcggccact
       61 ggtcgcgcga gcggtcggcg gccggccgtg acttccgcag ccacctgccc cgcttcaccg
      121 gcgagaacct cgaacgcaac ctcgccctgg tccaggagct ccggcggatc gccgaggaga
      181 aggacgcgac cgtggcgcag ctcgccgtcg cctgggtgct cgcgcggggc gaggacgtcg
      241 tgccgctcgt cggcgcgcga acccgggcgc agctcgcgga gtcgctcggc gcgctggatc
      301 tggcgctcac cggcgcggac ctggcgcgca tcgacgcggc cgttccggcg ggcgcggcga
      361 agggcgcccg ctacgatgcg gggcagatgg cgatgctgga cagcgagcgg taacgacgcg
      421 ggcgacgatg acgcgccagc tgctggtcgc ggggccattc gtcatcgccg gcgtcgcctg
      481 cttcgcggcg gcggtggtgc acgagcgtcg catgcatcgc catcgccaac cgggcgtcac
      541 ctacgccgcc gcgaccttgc ggcgtgacgg cggctggctc cggcgagagc tgttcaccga
      601 tgaagggctc cggcaccagc gccgtgcgtc ccggttcggg ctcgccggtg ccgcgtgttt
      661 catcgccttc ttcatcgcct gggtggcgat cggcgtcgcg cgctgaccgc ggccgccgag
      721 ccgcatcgtc cagcaacgac acgtcagcgc gccgcgccgg ccgtgcgagg cagggcggtg
      781 aacacgcggg tgatgaagcc gtggaactcc tccatgtact tcgtgaggaa gtcgcgcgtc
      841 gagtcgacgg tgacctcgcc gtcgtcggtg atgaggccgg gggtgaactc gatgtacgcc
      901 tcgatggcgt tcatcagcgg cgagttgcag aaggcgagga tgctccggag gtgctgctgg
      961 ccgaccgccg tgccgatctt gcccggggac gcgccgatga tggccgacgg ctttcgcgca
     1021 aaggagttgg tgccccacgg acggctcgcc cagtcgatcg cattcttgag cgcgccggga
     1081 atggaccgat tgtactccgg cgtcacgaag agcacggcgt cgaccgagcc gatcgcgtcc
     1141 ttcaacgcct tgccggccgg cgggtagtcc gcgtcgtagt cgtacgagta gagcgggagg
     1201 tcgccgatcg ggatctcgcg gagctgcagc tgcggcggcg acagacgcgt cagggccacg
     1261 gcgagcttcc ggttgatcga cgccctggcg aggctgccga cgaagtagcc gaccgtgaat
     1321 ccggtcatga gcggtcctcg tgaacggggg gcgaggggag gcgagcgggg cggacggcgc
     1381 ggctggcgct gcaaggagaa ggccgcgtgc gcccgcgcga tcgtcaggcg ctcgatggcc
     1441 cccgccgcgt ggcgtcgggc gggaccggcg catccttccg ctccgcccgg gaccgggcgt
     1501 ggcggtacgc ggcgaggctg atcgcggtcg tgcggttgcc gaggtgcgcg agcacgcgca
     1561 gtgcttcgga cacgtcgccg gcgcgagtgg ccacgcgcgc cgtcaccgcg cgctcggtgg
     1621 cctcgtgcag ggcagcgtga tcgcggaaca gtgccgtctc cgtccatcct tgtgcgaagc
     1681 gacgcgcgcc gtgcgcctcg gcgatcatgc gctggatcgc cgtaccatcg gcgagcagcg
     1741 tcgcggcgtc gtcgccggcc gcgtccatga tcaccaggct ctgcgccatg tcggcgagca
     1801 ggctgaaggc gtggtcctcg agctgcgcct gtcccgtcgc gcgcgcttcc ggcaccgtcg
     1861 catcggcgcg aagccggtcc acgtacgctt cgagaatgcc gtcgatctct tcccgcagcg
     1921 cgcggccgat ctcggccagc ccgtgcaccc gccacccggt gcccggcaat ccggcgcgct
     1981 cggcgcgggt ggatggggtc tcggtcggtc ccggcgccgc ggtgtccgtc gcgggcagcc
     2041 agagggtgaa ggtcgtgccg gtgccgacga cgctctcgag cgtcaggtcg ccccccatga
     2101 ggcgggccag gcgccggctg atcgtcaggc caaggccggt gccgcccttg gtgcgggtgt
     2161 gcccgcgctc cgcctgcacg aacggctcga acaccgccgc ctgctggtcg ggcgcgatgc
     2221 cgatgcccgt gtcggctacc cgcacgaacg cccacggccc ggcgccctcg actcgcgccc
     2281 cggcggccgt caccggtgcg ccgccacagg acacgacgat ggcgccgccg ggcgcggtga
     2341 acttgacggc gttcgagagg agattcacga ggatctgccg cacgcgggcc tcgtcgccga
     2401 catacgcgag gtcgccgccg tcacaccgct ccgtgatgcg gatctcgcgt tcctgtgcga
     2461 gcggcctggc gatggccagc gcgtcgacga tcacgcggtc cagctgcgcg tgctcgcggg
     2521 ccacgcgcat ctcgccggcg tccaccttgg cgacgtcgag cacgtcgtcc accaggccga
     2581 gcaggtgccg cgcggccgac atgatgcggc cgatctgcgc gcgctgcgcc ggactcgcgg
     2641 ggtccgggac accgaggtcg aggagctggg tgtagccgac gatggcgttg atcggcgtgc
     2701 ggatctcgtg actcatcgtc gccaggaagt ccgaccgcgc gcggctcgcc gactcggccg
     2761 ccgcgcgcgc gatgtcggcc agaccgcgca ggcgctcggc ctccgtcgtc cgctcggcga
     2821 gggcatcgag ggtggcttgc agctcctccg tctgcgcctc gagctccacc gcgctgtcgc
     2881 ggagctggtc gtgcgtcgcg cgctgctcgg tgacgtcgtg cagcaccacc gcccatgccg
     2941 tcgcgccggc cgcatcgtcc gccgatgatc cgtcgccgcg ccgcacgggg atggcgcgca
     3001 gctcgccaac cccggacgtg ccgtcggcgg cgcggaatcc gacgtcgatg acgccctcga
     3061 gcgcggcacg cgccaggagc gcggccccgt cgccccgtgc ccagtcggcg ggcgtgaggc
     3121 cgagcgcgtc ggcgaggtgc gcgccgacga cgctcccgcc gtccgtcggg gcgaacatct
     3181 gctcggccgc cacgttcgcc gagagcacgc gccccagggc gtccaccgag aacaccgcgt
     3241 cggggagcac gcgcagcagg ccggcgaggt aggcgtcgga gatgagcgcg cgcgccgtgc
     3301 gctgcggcga ctcggcgtgc cgctcgcgcg cgatgcgggc ccgcgtacgt tcgaagctcc
     3361 ggcgctggcg cgtgacgccg gccgcgcgct cggcgagcgc gctcccgacc tcgccgggcg
     3421 acgcgagcca gacctcgccg agccccggcg cgtacagcag ggcgcggcgc actgcggcga
     3481 ccgcgtccgg cgaggtgacc gcgatgacct gcacgttggc gtcgagcgca tggattgcgc
     3541 gc
//
LOCUS       DASSYW010000346         7321 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1311509, whole genome shotgun sequence.
ACCESSION   DASSYW010000346 DASSYW010000000
VERSION     DASSYW010000346.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 7321)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7321)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7321
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1311509"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            12..3230
                     /locus_tag="VFN38_05530"
     CDS             12..3230
                     /locus_tag="VFN38_05530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011254.1"
                     /translation="MRRSIIPLLGAVLAGTLAPQFAVSQQLDSTLLTAFRWRPIGPAN
                     MGGRVTDVEGIPSPSKTFYVAAAAGGLWKTTNAGTTFRPVFDNERVASLGDLAIAPSD
                     TNVVYLGTGEEDSRNSISPGGGVWKSTDGARTWKFVGLGETQQIGRIVVDPRNANVVY
                     VAALGHAWGPNRERGLYKSTDGGATWQLAKFVSEKAGFVDVQLDPSNPDVVWASSWER
                     VRGPYFLYSGGPGSALWKSTDAGRTWAEVKGNGLPETMKGRINFDISRSNPKMMYVMI
                     EADTVMNGKSDKSAKPQVRPSGLYRSTDGGVTWEKRNGTNVRPFYYNQVRVDPKNPDR
                     VYFTSTPVLFSDDGGKTARTATQGIHVDHHAMWIDPNDPEHFIVGDDGGVSQTWDRGG
                     NYDFLNVLPLGQFYAVSYDMAIPYRVCGGLQDNGSWCGPSRRRQGPVTNAMWFNVGGG
                     DGFYTAQDPMDPNTVYSESQGGNMSRVNVATGERTPLTKPSWRNRYRQFEDSIIITRG
                     DTTQPASRDVQRRVEDLRRRAAADSIDWDVRFNCNTPFFISPHNSSVFYAAGSKVLKS
                     TNRGENLTPISPDLTTHDPVKIKVSTQTTGGITPDNTGAETHSTITALAESPIRAGLL
                     YAGTDDGNVWLSRNDGATWENLTTRFAGVPKNTWVNRIEPSSADSNVFYVAFDGHRTN
                     DFAPYLYMTSDYGRTFRSIAANLPTGGPDFIHVVREDPYNPKLLFVGTDVGAYVSTDR
                     GGSWQKFMNGLPTVPVHDLKIHPREHELIAGTHGRSIWIVDIAPLEQLTDSMRSRSVA
                     LFAPKVAYEYGQPTVEGQAAGHKIFEAPSPAYGADIWYRLAGGTRGEQTRIVISDASG
                     DTIRTLNGPSGAGLHKVTWDLRGKAPKAAPLTPSGVRDSVVQARRIAFVIDSLDKAGT
                     LPKETIERLRTATAGGNTQGLAQLFGFGGGGGGGGGGRGLGGGGGFNARPGEGAPARG
                     AAAAQGESVSEAAPVDQGQLGQIAQLFRTGGGGGGGFGGGRGGAPLVNTGDYLVTINV
                     GGEKLRQMLHVERLPGGGAAGGFAGGDDEEDDHDDQDIGIDP"
     gene            complement(3313..4953)
                     /locus_tag="VFN38_05535"
     CDS             complement(3313..4953)
                     /locus_tag="VFN38_05535"
                     /EC_number="3.5.1.4"
                     /inference="COORDINATES: protein motif:HMM:NF006006.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HET9011255.1"
                     /translation="MSEPLSTERSVTRRCFVGAAAATAVAALVPTRHAVSAPPPVPRV
                     AAPFELEEQTIAELQDGMRSGRYTARTLVEQYLGRIESLDRRGPTLRHVLETNPDALS
                     IADSLDAERRTGRVRGALHGIPVLVKDNIDTADRMTTTAGSLALEGSRAARDAFVVQR
                     LRAAGAIVLGKTNLSEWANFRSTHSSSGWSGRGGQGRNPYALDRTPSGSSSGSAGGAA
                     ASYCAVAVGTETDGSITSPAAACSLVGVKPTVGLVSRSGIIPIAHSQDTAGPMARTVT
                     DAAILLTALAGVDPRDAATAANRGTSVDYARFLDPSGLRGARIGVARKVFTGYSVSAD
                     AAFEQALRALTDTGALLVDPADIATAGKFDDAEFEVLLYEFKADLETYLRGLPAGARV
                     RTLDDLIAFDKAHATRELPYFGQEIFEMAAKKGPLSTPAYRKALAKCRSMSRTQGLDA
                     TFAKHRLDALVAPTQGPPSVIDLVNGEKYSGSSTTPCAVAGYPAITVPMGYAFGLPLG
                     ITFMGRAWSEPVLVKYAYAFEQATKARRAPRYLATAEL"
     gene            5118..5429
                     /locus_tag="VFN38_05540"
     CDS             5118..5429
                     /locus_tag="VFN38_05540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011256.1"
                     /translation="MGLLTFHDAKGTRWRVWHVETPMARAHLMDASYRNGWLVFEKED
                     GSERRRLAQVPEDWEHLTTDHLARLCTLAVPAPPARPISSVTTVKMPVVPRPSDLPRD
                     R"
     gene            5497..6456
                     /locus_tag="VFN38_05545"
     CDS             5497..6456
                     /locus_tag="VFN38_05545"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HET9011257.1"
                     /translation="MIQARPFFDRLSALADPTRSRLLLLLDRHELTVGELCSALQLPQ
                     STVSRHLKTLADEGWVTARAEGTSRRYTMPGSALDGGARRLWHLVREQVGTTPSARHD
                     LSRAEQVLLERRSTSQAFFSSRAGQWDKVRAELYGARAELTPFAALLDPSWIVADLGC
                     GTGQTAAALSPFVDRVIAVDESSAMLSAARRRLADRDNVDVRGGRLEALPVGDAELDA
                     AILSLVLHFVVDPAVVLAEAARTMKPGARLLIVDMVRHEREEYRATMGHLWLGFDAEP
                     LSAWLERAGFSDVRIVPLAPDPQAKGPGLFTARALRRSGGPAA"
     gene            6524..>7321
                     /locus_tag="VFN38_05550"
     CDS             6524..>7321
                     /locus_tag="VFN38_05550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylhomocysteinase"
                     /protein_id="HET9011258.1"
                     /translation="MATTQRPTAPSPLDRPAFKVADLSLAEFGRKELRLAEQEMPGLM
                     ALRNEFKGKKPLAGAKIMGSLHMTVQTAVLIETLTELGADVRWVSCNIFSTQDHAAAA
                     VAVGKNGTVDNPKGIAVFAWKGETLEEYWWCTEQALMWPDGTGPNLILDDGGDATMLV
                     HKGAEYEKSGKIPEFNEATDSEEWGVILDLIRAEQKKNPGRWTKVAAAIRGVSEETTT
                     GVHRLYEMMNAGTLRFPAINVNDAVTKSKFDNLYGCRHSLTDGILRAS"
BASE COUNT         1194 a         2487 c         2586 g         1054 t
ORIGIN      
        1 cccacagcca catgcgtcgc tcgatcatcc ccctgctcgg cgccgtcctc gccggcaccc
       61 tggcaccgca gttcgcggtc tcccagcagc tcgactccac cctcctcacc gccttccgct
      121 ggcgaccgat cgggccggcc aacatgggcg gccgggtcac cgacgtggag gggattccct
      181 ccccgtccaa gactttctac gtggccgccg cggcgggggg cctgtggaag accaccaacg
      241 ccgggacgac ctttcgtccc gtgttcgaca acgagcgcgt cgcctccctc ggcgatctcg
      301 ccattgcgcc gagcgacacg aacgtcgtct acctcggcac gggcgaggag gattcgcgca
      361 actccatctc gcctggtggc ggggtgtgga agtccaccga cggtgcccgc acctggaagt
      421 tcgtcggtct cggcgagacg cagcagatcg ggcgcatcgt ggtggatccg cgcaacgcca
      481 acgtggtgta cgtcgccgcg ctgggacatg cgtgggggcc gaaccgggag cgcggcctgt
      541 acaagagcac cgacggcgga gcgacgtggc agctcgcgaa gttcgtgagc gagaaggcgg
      601 gcttcgtgga cgtgcagctc gacccgagca atcccgacgt ggtctgggcg tcgagctggg
      661 agcgggtgcg cggtccgtac ttcctgtata gcggcggccc cggatccgcc ctgtggaaat
      721 ctaccgacgc gggaaggacg tgggccgagg tgaagggcaa cgggttgccg gagacgatga
      781 aggggcgcat caacttcgac atctcgcgca gcaacccgaa gatgatgtac gtcatgatcg
      841 aggccgacac ggtcatgaac ggcaagagcg acaagagcgc gaagccccag gtgaggccct
      901 ccggcctgta ccggtcgacc gacggcggcg tcacatggga gaagcgcaac ggcacgaacg
      961 tgcgtccctt ctactacaac caggtccgcg tcgatccgaa gaacccggac cgcgtgtact
     1021 tcacgtccac cccggtgctg ttcagcgacg acgggggcaa gacggcgcgc acggccacgc
     1081 agggcatcca cgtcgaccat cacgcgatgt ggatcgaccc gaacgatccg gagcacttca
     1141 tcgtcggcga cgacggcggc gtgtcgcaga cgtgggatcg tggcgggaac tacgacttcc
     1201 tgaacgtgct gccgctcggc cagttctacg cggtgtcgta cgacatggcc atcccgtacc
     1261 gggtgtgcgg cggcctgcag gacaacggca gctggtgcgg tccgagccgg cgccggcagg
     1321 gcccggtcac gaacgcgatg tggttcaacg tgggcggcgg cgacggcttc tacacggcgc
     1381 aggatccgat ggacccgaac accgtgtaca gcgagtcgca gggcggcaac atgagccgcg
     1441 tgaacgtggc caccggcgag cgcacgccgc tcaccaagcc gagctggcgg aatcgctacc
     1501 ggcagttcga ggactcgatc atcatcacgc gcggcgacac cacccagccg gcgtcgcgcg
     1561 acgtgcagcg ccgggtcgag gatctgcgcc gacgcgccgc ggcggactcc atcgactggg
     1621 acgtccgctt caactgtaac acccccttct tcatctcgcc gcacaacagc agcgtgttct
     1681 acgccgccgg gagcaaggtg ctgaagagca cgaaccgagg cgagaatctc acgcccatct
     1741 cgccggatct cacgacgcac gatccggtca agatcaaggt gagcacgcag acgaccggcg
     1801 gcatcacgcc ggacaacacc ggcgccgaga cgcacagcac catcacggcc ctggcggagt
     1861 cgccgatccg cgccgggctg ctctacgccg gcaccgacga cgggaacgta tggctgtcgc
     1921 ggaacgacgg cgcgacgtgg gagaatctca ccacgcgctt cgccggcgtg ccgaagaaca
     1981 cgtgggtgaa tcgcatcgag cccagcagcg cggactcgaa cgtgttctac gtcgccttcg
     2041 atgggcatcg cacgaacgac ttcgcgccgt acctgtacat gacgtcggac tacggacgaa
     2101 ccttccgctc catcgcagcg aacctgccga cgggcgggcc ggacttcatc catgtggtcc
     2161 gcgaggatcc gtacaacccg aagctgctct tcgtgggcac cgacgtcggc gcatatgtgt
     2221 cgaccgaccg tggcggctcg tggcagaagt tcatgaatgg gctgcccacc gttccggtgc
     2281 acgatctcaa gatccatccc cgcgagcacg agctgatcgc cggcacgcat ggccgctcga
     2341 tctggatcgt ggacatcgcg ccactcgaac agctgacgga cagcatgcgg tcgcgcagcg
     2401 tggcgctgtt cgcgccgaag gtggcgtacg agtacggcca gcccaccgtc gaagggcagg
     2461 cggcggggca caagatcttc gaggcaccca gcccggcgta cggtgcggac atctggtacc
     2521 gcctcgccgg cgggacgcgc ggcgagcaga cgcgcatcgt gatctcggac gccagtggtg
     2581 acacgattcg cacgctcaac ggtccgagcg gcgccggcct gcacaaggtg acgtgggatc
     2641 ttcgcggcaa ggcaccgaag gcggcgccgc tcactccgtc cggcgtgcgc gattccgtcg
     2701 tgcaggcgcg gcgcatcgcc ttcgtcatcg actcgctcga caaggcgggg acgctgccga
     2761 aagagacgat cgaacgcctg cgcacggcca cggcgggagg aaacacgcag gggctcgcgc
     2821 agctgttcgg atttggcggc ggcggtggcg gtggcggtgg cggacgcgga ctggggggcg
     2881 gtggcggatt caacgcgcgg ccgggcgagg gcgctccggc acgcggcgcg gccgcggcgc
     2941 agggcgagag cgtgagcgag gcggctccgg tggatcaggg ccagctcgga cagatcgccc
     3001 agctcttccg caccggcggc ggtggcggtg ggggattcgg cggagggcgc ggtggcgcgc
     3061 cgctggtgaa caccggcgac tacctcgtca ccatcaacgt cggcggagag aagctgaggc
     3121 agatgctgca cgtcgagcgc ctgccgggcg gtggcgcggc gggcggcttc gccggcggtg
     3181 acgacgagga ggacgaccac gacgatcagg acatcggcat cgatccctga tcgatcgtgc
     3241 acctggttgc agacgagggt ccggcgatgc atcgccggac cctcgtcgtt cgtgcaccgt
     3301 ggggccgtcc gctcagagct cggcggtggc gaggtatcgg ggggcacgcc gcgccttcgt
     3361 cgcctgctcg aacgcgtatg cgtacttcac gagcacgggc tcgctccagg cacggcccat
     3421 gaaggtgatg ccgagcggaa gtccgaacgc gtagcccatc ggtaccgtga tcgcgggata
     3481 ccctgcgacc gcgcagggag tcgtgctgct gcccgagtac ttctcgccgt tcacgagatc
     3541 gatcaccgac ggcgggccct gtgtcggcgc gacgagcgcg tcgaggcgat gcttcgcgaa
     3601 cgtcgcgtcg agcccctgcg tacgcgacat cgaccggcac ttcgcgagcg ccttgcgata
     3661 tgcgggcgtg gagagcggac ccttcttcgc cgccatctcg aagatctcct gcccgaagta
     3721 gggcagctcc cgagtggcgt gcgccttgtc gaaggcgatg aggtcgtcga gggtgcggac
     3781 gcgcgcgccc gccgggaggc cgcgcaggta cgtctcgagg tccgccttga actcgtagag
     3841 gagcacctcg aactcggcgt cgtcgaactt gccggcggtg gcgatgtcgg cgggatcgac
     3901 gaggagggcg ccggtatccg tcagcgcacg aagcgcctgc tcgaacgcgg cgtcggcgga
     3961 gacgctgtat cccgtgaaga ccttgcgcgc gacgccgatg cgcgcgccgc gcagtccgct
     4021 cgggtcgaga aatcgcgcgt agtccacgct cgttccgcgg ttggccgcgg tggcggcgtc
     4081 ccgtggatcg accccggcga gcgccgtcaa caggatggcc gcgtcggtga cggtgcgcgc
     4141 catcggtccc gcggtgtcct gggaatgggc gatcgggatg atgccgctgc ggctcaccag
     4201 tccgaccgtc ggcttcactc cgacgagcga gcacgcggcc gcgggcgacg tgatcgatcc
     4261 gtcggtctcc gtcccgacgg cgacggcgca gtagctggcc gccgcaccac cggcggagcc
     4321 cgagctggag ccggacggcg tacggtcgag cgcgtacgga ttgcgtccct gaccaccgcg
     4381 ccccgaccat ccgctcgacg aatgcgtgga gcggaagttg gcccattcgc tcaggttggt
     4441 ctttcccagc acgatggcgc cggcagcgcg cagtcgctgc acgacgaacg catcgcgcgc
     4501 ggcgcgcgag ccctcgagcg cgagcgagcc cgccgtcgtc gtcatccggt cggccgtgtc
     4561 gatgttgtcc ttcacgagca cgggaatgcc gtgcagcgcg ccgcgcacgc gcccggtccg
     4621 gcgttcggcg tccagcgaat ccgcgatgga cagcgcgtcg ggattggtct ccaggacgtg
     4681 tcgcaacgtc ggaccgcgcc ggtcgagcga ctcgatgcgg cccaggtact gctccacgag
     4741 cgttcgcgcc gtgtagcggc cgctgcgcat gccgtcctgg agctcggcga tcgtctgctc
     4801 ctccagctcg aacggcgcgg cgacgcgcgg aaccggtggc ggcgcggaca ccgcgtggcg
     4861 cgtgggcacg agagcggcga cggccgtggc cgccgcggcg ccgacgaagc accgtcgcgt
     4921 gacggagcgt tccgtcgaga gcggctcgga catggaagag gcgtggaagg gaaggagcgc
     4981 acgcggacgc gccaacatgc gcgcgccagg cgcgcgcggc aatgaacggc ggccggaatg
     5041 caacttgccg ctcatgcggg atgagcgcgc gccggcgacg gagcgcatca cgcggatgga
     5101 gcgggaggag cagtctcgtg ggtctgttga cgtttcacga tgcgaagggc acgcggtggc
     5161 gggtgtggca cgtggagacc cccatggcgc gtgcgcacct gatggacgcc agctatcgca
     5221 acggctggct ggtgttcgag aaggaggacg ggagcgagcg acgccggctc gcccaggtgc
     5281 cggaggactg ggagcacctg acgaccgacc acctggcccg gctctgcacg ctggcggtgc
     5341 cggcgccccc tgcccgtccg atctcgagcg tgacgaccgt gaagatgccg gtcgtccccc
     5401 gtccatccga cctccctcgc gaccgctagg cgggccggcc gaatccggcc cttgactcgc
     5461 cgacacgagc gagcaacctt tcatccggat atacggatga tacaggcccg ccccttcttc
     5521 gaccgcctct cggcgctcgc cgaccccacc cggagtcggc tgctgctgct gctcgaccgt
     5581 cacgagctga cggtcggtga gctgtgcagt gcgctccagc tcccgcagag cacggtcagc
     5641 cggcacctga agacactggc cgacgaaggc tgggtgaccg cccgtgccga gggcaccagc
     5701 cgccgctaca ccatgcccgg gagcgcgctc gacggcgggg cacgccggct ctggcacctg
     5761 gtgcgcgagc aggtcggcac gacgccctcc gcgcgccacg acctgtcgcg tgccgagcag
     5821 gtgcttctgg agcggcggtc gacgtcgcag gcgttcttct cctcgcgcgc cggccagtgg
     5881 gacaaggtgc gggccgagct gtatggcgcc cgtgccgagc tcacgccgtt cgccgcgctg
     5941 ctcgatccct cgtggatcgt ggcagatctc ggctgcggca caggccagac ggcggcggcg
     6001 ctgtccccgt tcgtcgaccg cgtcatcgcc gtggacgagt cgagcgcgat gctctcggcg
     6061 gctcggcgcc gtctggcgga tcgcgacaac gtcgacgtcc gagggggacg cctggaggcc
     6121 ctcccggtcg gcgatgccga gctggatgcg gccatcctct cgctcgtgct gcacttcgtc
     6181 gtcgatcccg cagtcgtgct ggccgaagcg gcccgcacga tgaagcccgg ggcgaggctc
     6241 ctcatcgtcg acatggtgcg tcacgagcgg gaggaatacc gcgcgacgat gggacatctc
     6301 tggctgggct tcgatgccga gccattgtcc gcgtggctcg agcgcgccgg cttctccgac
     6361 gtgcgcatcg ttcccctcgc tcccgacccg caggccaagg ggcctgggct cttcacggca
     6421 cgagcgctca gacggtcggg cggcccggcc gcctgatcgc gatcacgctt ccacggattt
     6481 cacgcgtcac cttcgcccgt tctcacgttt accggtttcc atcatggcca ccacccagcg
     6541 tcccaccgca cccagtcccc tcgatcgccc ggccttcaag gtcgccgatc tctccctcgc
     6601 cgagttcggg cgcaaggagc ttcgcctcgc cgagcaggag atgcccggcc tgatggcgct
     6661 ccgcaacgag ttcaagggga agaagccgct cgccggcgcg aagatcatgg gctcgctgca
     6721 catgaccgtg cagacggccg tgctcatcga gaccctcacc gagctcggcg ccgacgtgcg
     6781 ctgggtgagc tgcaacatct tcagcaccca ggatcacgcc gccgccgccg tcgcggtggg
     6841 gaagaacggc acggtcgaca acccgaaggg gatcgccgtc ttcgcctgga agggcgagac
     6901 gctcgaggaa tactggtggt gcaccgagca ggcgctgatg tggcccgacg gcaccggccc
     6961 gaacctaatc ctggatgacg gcggcgacgc gacgatgctc gtgcacaagg gtgccgagta
     7021 cgagaagtcc ggcaagatcc cggagttcaa cgaggcgacg gacagtgagg agtggggcgt
     7081 gatcctggac ctcatccgcg ccgagcagaa gaagaacccg ggccgctgga cgaaggtcgc
     7141 ggcggcgatc cgcggcgtct ccgaggagac gacgacgggt gtgcaccgcc tgtacgagat
     7201 gatgaacgcc ggcacgctcc gcttcccggc gatcaacgtc aacgacgcgg tgacgaagag
     7261 caagttcgac aacctgtacg gctgccgcca ttcgctcacc gacggcatcc tgcgcgcgag
     7321 c
//
LOCUS       DASSYW010000347         2040 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_887515, whole genome shotgun sequence.
ACCESSION   DASSYW010000347 DASSYW010000000
VERSION     DASSYW010000347.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2040)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2040)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2040
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_887515"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            190..1536
                     /gene="argG"
                     /locus_tag="VFN38_05555"
     CDS             190..1536
                     /gene="argG"
                     /locus_tag="VFN38_05555"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004055 - argininosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HET9011259.1"
                     /translation="MSNVLTSLPVGERVGIAFSGGLDTSAAVAWMRDRGAVPYTYTAD
                     LGQYDEPDLAGVPGRAEQYGAEQGRLVDCREELVREGLMALQCGAFHITTAGKTYFNT
                     TPLGRAVTGTLLVRAMHEDGVDIWGDGSTYKGNDIERFYRYGLLVNPGLRIYKPWLDR
                     KFIDELGGRKEMSEYMRDAGLAYRMSVEKAYSTDSNILGATHEAKDLEHLDRGITIVQ
                     PIMGVASWNPDVAVAPETVTIRFDQGRPAALNGQTFDDRVALMLEANRIGGRHGLGMS
                     DQIENRIIEAKSRGIYEAPGMALLFIGYERLITGIHNEDTIEQYRDNGRRLGRLLYQG
                     RWFDSQALMLRESAQHFVARAVTGEVTVELRRGNDYSILNTTSPNLTYKPERLTMEKG
                     ESAFSPLDRIGQLTMRNLDIDDTREKLLTYLKTGLLKPSRTGTLPQLAAGDPDEES"
     gene            complement(1533..>2040)
                     /locus_tag="VFN38_05560"
     CDS             complement(1533..>2040)
                     /locus_tag="VFN38_05560"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HET9011260.1"
                     /translation="VRDAVWAANLRAGDLRIEIMETTLMENPEGAEVVLRELSGLGVK
                     VYLDDFGTGFSSLSYLHRFPVDTLKIDQSFIASLSNGSSQPAIVQSIVALAKTLGTHV
                     IAEGVETEAQMAELVRLGCNEAQGFFFARPLPPCTAETFLEQSQRSESRSSAIVKPTA
                     EQVSALTH"
BASE COUNT          358 a          704 c          675 g          303 t
ORIGIN      
        1 catcgcggcc gccggtgcgg cggtcgccgt cgccgggttc ggcggcacct acgcccgggc
       61 cggcgagccc gagccgacga cgccggtcga tgagccggcg ccggaggccg tcgccgacgg
      121 cgacgcggcg gcgccgatcg gcgaacacgc cgcgccgccc gccgccggcc ctggctagct
      181 tgcccgcctg tgagcaacgt cctgacgtcg ctgcccgtcg gtgaacgggt cggcatcgcc
      241 ttctccggtg gtctcgacac gtcggccgcg gtggcctgga tgcgcgaccg cggcgcggtc
      301 ccgtacacgt acaccgccga cctcggccag tacgacgagc ccgacctcgc cggcgtgccc
      361 ggccgggccg agcagtacgg cgccgagcag ggccgcctgg tcgactgccg cgaggagctc
      421 gtccgcgagg gcctgatggc gctgcagtgc ggggcgttcc acatcacgac cgccggcaag
      481 acctacttca acaccacgcc cctcggccgg gcggtcacgg gcacgctgct cgtgcgggcc
      541 atgcacgagg acggcgtcga catctggggc gacggcagca cgtacaaggg caacgacatc
      601 gagcgctttt accgctacgg gctgctggtg aatcccgggc tgcgcattta caagccgtgg
      661 ctcgaccgga agttcatcga cgaactcggc gggcgcaagg aaatgtcgga atacatgcgt
      721 gacgccgggc tcgcttatcg catgagcgtc gagaaggcgt attcgaccga ctcgaacatc
      781 ctcggcgcga cgcacgaggc caaggatctc gaacatctcg accgagggat cacgatcgtc
      841 cagccgatca tgggcgtcgc gtcctggaac ccggatgtcg cggtcgcacc ggagaccgtc
      901 accatccggt tcgaccaggg gcgccccgcc gcgctgaacg ggcagacgtt cgacgatcgc
      961 gtggcgctga tgctcgaggc caatcgtatc ggcggccgcc acgggctcgg catgagcgac
     1021 cagatcgaga accgcatcat cgaggcgaag agccgcggca tctacgaagc gcccggcatg
     1081 gccctcttgt tcatcggtta cgaaaggctg atcaccggca tccacaacga ggacaccatc
     1141 gagcagtacc gcgacaacgg ccggcgcctc ggccggctgc tctatcaggg ccgctggttc
     1201 gattcgcagg cgctgatgct gcgcgaatcg gcgcagcact tcgtggcgcg ggcggtgacc
     1261 ggcgaagtga cggtcgagct gcgccgcggc aacgactact ccatcctgaa cacgaccagc
     1321 ccgaacctga cctacaagcc cgagcgcctg accatggaaa aaggcgaatc ggcgttctcg
     1381 ccgctggacc gcatcgggca gctgacgatg cggaacctcg acatcgacga cacgcgcgag
     1441 aagttgctga cctatctgaa gaccggattg ctcaagccgt cgcgaaccgg cacgctgccg
     1501 cagctcgccg ccggtgaccc ggacgaagag tcttaatgcg tcagcgctga aacctgctcc
     1561 gccgtgggtt tgacgatcgc cgacgatcgc gactcgctcc gctgactttg ctccaggaag
     1621 gtctcggccg tgcacggcgg cagcggccgg gcgaaaaaga atccctgcgc ctcgttgcag
     1681 ccaagccgca cgagctccgc catctgcgcc tcggtttcga ccccttccgc gatgacgtgc
     1741 gtgcccagcg tcttcgccag cgcgacgatg ctttgcacga tggcgggttg agaactgccg
     1801 ttcgacaggc tggcgatgaa cgactgatcg atcttgagcg tgtccaccgg aaagcggtgg
     1861 agatagctga gcgacgaaaa gccggtgccg aaatcgtcca gatagacttt gacgccgagc
     1921 ccggacaact cgcggagcac gacctcggcg ccttccggat tctccatcag cgtcgtttcc
     1981 atgatttcga tgcgcaggtc tcccgcgcgc aggttcgcgg cccacacggc gtcgcgcacc
//
LOCUS       DASSYW010000348         3264 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1034965, whole genome shotgun sequence.
ACCESSION   DASSYW010000348 DASSYW010000000
VERSION     DASSYW010000348.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3264)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3264)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3264
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1034965"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..705)
                     /locus_tag="VFN38_05565"
     CDS             complement(<1..705)
                     /locus_tag="VFN38_05565"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HET9011261.1"
                     /translation="MRFPLRFRLSLMALFVSASAAQGQRTARLEGTVTDSMHARPLVG
                     ATVLITRNSEPAAWFSVTTDDRGRYRLDTLLAGRYSAAIWHPILDSLELTLPPRTIEI
                     RDGQHATLDLALPSGATLRAGTCPGIDLPPGTGALGGRVTDADGDADHPLAGAVVAVR
                     WSDLTVDRATLKVTGGEHAVGATTNAEGLFRLCGLPTDSWLVLQVQRGNLAGSALQVV
                     IPDSVGVAVANLSFSAE"
     gene            781..1692
                     /locus_tag="VFN38_05570"
     CDS             781..1692
                     /locus_tag="VFN38_05570"
                     /inference="COORDINATES: protein motif:HMM:TIGR00654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhzF family phenazine biosynthesis protein"
                     /protein_id="HET9011262.1"
                     /translation="MRYRFLTCDVFTSEAFGGNQLAVFPDARGIPEHRLLDVTREFNY
                     SETTFVFPPENPRHARRVRIFTPGGEVPFAGHPTVGTAHVLAVTGEIPLSGDTTRIVL
                     EEKVGPVPIAIRAAGGHPTFTQLSVAKLPEVLAAPPSRDDLARVLGLEVDDLLGGEWS
                     PQVMSCGLPFIFVPLHDRGAVARARIRMDAWERTLKDAPVAEIMVFAPGGERAGTDYR
                     ARMFAPGLSVPEDPATGSACAALGGYLAARDARRGGTLHWVVEQGFEMGRPSMLEVEA
                     DVAGGAVTAVRVGGDTVLMSEGTMEIS"
     gene            complement(1685..1960)
                     /locus_tag="VFN38_05575"
     CDS             complement(1685..1960)
                     /locus_tag="VFN38_05575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011263.1"
                     /translation="MATVSRRDRLTDLAALVLILAGIALYLDAGARMRTISGYSYQHP
                     GPRGAVVAADWARRESYGGIAVAVLGCGVGIASAARHLAGRQRLAVS"
     gene            2060..>3264
                     /locus_tag="VFN38_05580"
     CDS             2060..>3264
                     /locus_tag="VFN38_05580"
                     /inference="COORDINATES: protein motif:HMM:NF012607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacid dehydrogenase"
                     /protein_id="HET9011264.1"
                     /translation="MTYRILVTDDIDPDGVALLREEPRFIVDEVPTLPPAELLERIGD
                     YDAFVGRSATRVTKELLERATRLRVVGRAGVGVDNIAIDAATALGVAVINAPAGNTVA
                     VAELFFGTVLGLLRHLPHAAASMREGKWDRSKLLGTELKGKSLLIVGLGRIGGEIATR
                     AHAFGMDISAYDPYVSDERFRALKVRRLATLEEGLDTADIVTVHTPLTEETEGIIGKR
                     ELARLKSGAIVVNMARGGIVEESALVAALESGQVRGAVVDAFTKEPLAPDHPLRKAPN
                     TFLTPHIGASSAEAQRNVAVDACAAVRDALLHGELSRSIIVAGTGEGDWRDLQPALHV
                     ARRAAAVARAILADRGVRAVQRLSLRVGPELAGASNALLASAAAGVLEGTTEVERLNL
                     INARSLAESR"
BASE COUNT          461 a         1172 c         1172 g          459 t
ORIGIN      
        1 ctccgcgctg aacgacaggt tcgctacggc gacgcccacc gaatccggga tcacgacctg
       61 gagcgcgctt cccgcgagat tcccgcgctg cacctgaagc acgagccagc tgtcggtggg
      121 gagtccgcag agccggaaca atccctcggc gttggtggtc gcgcccaccg catgttcgcc
      181 acccgtgacc ttgagcgtcg cccgatccac ggtcagatcg ctccaccgga cggccactac
      241 cgctcccgcc aggggatggt cggcgtcgcc gtcggcgtcg gtcacgcggc cccccagcgc
      301 gcccgttccc ggaggcaggt cgatcccggg gcaggttccc gcgcgcagcg tcgctccgga
      361 cggcagcgcc agatcgagcg tcgcatgctg tccgtcccgg atctcgatcg tgcgcggggg
      421 cagcgtcagc tcgagcgaat cgaggatcgg atgccagatc gccgcgctgt agcgtcccgc
      481 cagcagggta tccaggcggt agcggccccg gtcgtcggtc gtgacgctga accaggccgc
      541 cggctcggag ttgcgcgtga tgagcaccgt ggcgcccacg agcggccgcg cgtgcatgct
      601 gtcggtgacc gtgccctcga gtcgcgcggt acgttgcccc tgcgcggcgg acgcgctcac
      661 gaacagcgcc atcagagaga gccggaaccg gagtgggaat ctcatctcga tatggtgcca
      721 accggctcgg cggcccgcca gatactcatg ccatttgtta agtcgcgcta actctcggcc
      781 atgcgatacc gcttcctgac ctgcgacgtg ttcacctccg aggcgttcgg cggcaaccag
      841 ctcgccgtgt ttcccgacgc gcgcggaatc cccgagcacc gcctgctcga cgtgacccgg
      901 gagttcaact actcggagac gacgttcgtc ttccctccgg agaacccgcg ccacgcgcgt
      961 cgcgtgcgga tcttcacgcc gggcggcgag gtgccgttcg ccggccatcc gacggtcggc
     1021 acggcgcacg tcctcgccgt gacgggtgag attcccctga gcggcgacac gacgcgcatc
     1081 gtgctggagg agaaggtcgg gccggtgccg atcgccatcc gggccgccgg tgggcatccc
     1141 accttcaccc agctctccgt cgcgaagctg ccggaagtgc tcgccgcgcc gccctcgcgc
     1201 gacgatctcg cgcgcgtgct cggcctcgag gtggacgacc tcctcggcgg cgagtggtcg
     1261 ccgcaggtga tgtcgtgcgg cctgccgttc atcttcgtgc cgctgcatga tcggggcgcc
     1321 gtggcgcgcg cccgcatccg catggacgcg tgggagcgta cgctcaagga cgcgccggtc
     1381 gccgaaatca tggtcttcgc ccccggcggc gagcgcgcgg gcaccgacta ccgtgcgcgg
     1441 atgttcgccc cgggcctcag cgtgccggag gatccggcca ccgggagcgc ctgtgcggcg
     1501 ctcggcggct acctggcggc gcgcgacgcc aggcgcggcg gcacgctgca ctgggtcgtc
     1561 gagcagggat tcgagatggg acgcccgagc atgctcgagg tggaggccga cgtggccggc
     1621 ggcgcggtga ccgcggtgcg cgtgggcggc gacaccgtgc tgatgtccga ggggacgatg
     1681 gagatcagct gacggcgagt cgttgccggc cggcgaggtg ccgggcggcg ctcgcgatgc
     1741 cgacgccgca gcccagcacc gcgaccgcga tgccgccgta cgactcgcgg cgcgcccagt
     1801 cggccgcgac gacggcgccg cgcgggccgg gatgctgata ggagtacccc gagatcgtgc
     1861 gcatgcgagc gccggcgtcg aggtagagcg cgattcctgc aaggatgagc acgagcgcgg
     1921 cgaggtcggt gagccggtcg cggcgtgaga cggtagccat gcctgcagga cgatgcagac
     1981 ggccccggag ccacgaagtt gccctcgccc actcattccg acagcttgcc ctgagcgtcc
     2041 cacccgtact cggcccttcg tgacctaccg aattctcgtc accgacgaca tcgaccccga
     2101 cggcgtcgcg ctgctgcgcg aagaaccccg gttcatcgtc gacgaggtgc cgacgctccc
     2161 ccccgccgag ctgctcgagc gcatcggcga ctacgacgcc ttcgtcggcc gcagcgcgac
     2221 gcgggtcacc aaggagctgc tcgagcgtgc gaccaggctg cgcgtggtcg gtcgcgccgg
     2281 cgtcggcgtc gacaacatcg ccatcgacgc ggccacggcg ctcggcgtcg ccgtcatcaa
     2341 cgcgcccgcc ggcaacaccg tcgccgtggc cgagctcttc ttcggcacgg tgctcggcct
     2401 gctgcgccac ctgcctcacg cggccgcgtc gatgcgcgag gggaagtggg accggtcgaa
     2461 gctcctcggc accgagctca agggaaagtc gctgctcatc gtggggctcg gccgcatcgg
     2521 gggcgagatc gccacgcgcg cgcacgcctt cggcatggac atctcggcgt acgatcccta
     2581 cgtgagcgac gagcggttcc gcgcgctcaa ggtgcgccgt ctcgcgacgc tcgaggaagg
     2641 gctggacacc gccgacatcg tcacggtgca caccccgctc accgaggaga ccgagggcat
     2701 catcggaaag cgcgagctcg cgcgcctcaa gagcggcgcg atcgtggtga acatggcgcg
     2761 cggcgggatc gtcgaggaat cggcgctcgt ggcggcgctg gagagcggtc aggtgcgcgg
     2821 cgcggtggtg gacgccttca cgaaggagcc cctcgcgccc gatcatcccc ttcgcaaggc
     2881 accgaacacc ttcctcacgc cgcacatcgg cgcgtcgagc gccgaagcgc agcgcaacgt
     2941 ggccgtggac gcgtgcgccg cggtgcgcga tgccctgctc cacggcgagc tgtcgcgatc
     3001 gatcatcgtg gcgggcaccg gcgaggggga ctggcgcgac ctccagccgg cgctgcacgt
     3061 ggcgcggcgc gcggcggccg tggcacgcgc gatcctcgcc gaccgcggcg tgcgcgcggt
     3121 gcagcggctg tcgcttcgcg tcgggccgga gctcgcgggc gcgtcgaacg cgctgctcgc
     3181 ctccgccgcc gcgggggtgc tcgagggcac gacggaagtc gagcggctca acctgatcaa
     3241 cgcgcggtcg ctcgccgaat cgcg
//
LOCUS       DASSYW010000349         2621 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_127854, whole genome shotgun sequence.
ACCESSION   DASSYW010000349 DASSYW010000000
VERSION     DASSYW010000349.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2621)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2621)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2621
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_127854"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..538)
                     /locus_tag="VFN38_05585"
     CDS             complement(<1..538)
                     /locus_tag="VFN38_05585"
                     /inference="COORDINATES: protein motif:HMM:NF017652.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-keto-5-aminohexanoate cleavage protein"
                     /protein_id="HET9011265.1"
                     /translation="MSHPCIITAAITGSVPRKENNPAVPITVSEQIESTHACYEAGAA
                     LVHVHVRNDDQSTTSNPDKFADFQERLRRHCPDMIVQFSTGGRSGVGSERGGMLHLGP
                     DMASLSTGSCNFPTRVYENPPELILELAGKMNRYGVKPEIEVFDLAMLYNAINYVRDG
                     LIEAPLHVQFVLGVKHALP"
     gene            complement(538..2097)
                     /locus_tag="VFN38_05590"
     CDS             complement(538..2097)
                     /locus_tag="VFN38_05590"
                     /inference="COORDINATES: protein motif:HMM:NF020252.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HDOD domain-containing protein"
                     /protein_id="HET9011266.1"
                     /translation="MATTSPAVELILARLRESGDFPAMAKTVGSVSTLTSSEDTSISA
                     LADTVLQDYGLAQKLLRLVNTVAYAQHGQVTTVSRAVLLMGFDRVRSVALGLMIFEKL
                     QAEAKTPALLDALNMSFYSAILGRSIAGQTALADKEETFITALFHNLGRTLVALYLPA
                     EAKAIHSEGAQHQDFAVLKVLGMSYSSIGVSVARALNLPEKLLQSMNRVTGAQSHASM
                     TDEEKLAALATLSNGVADALATSASPKVKKQAIDRLVKSYGAPFKGLDGKTMDTLIAG
                     AETELHEHSKTFKLNLEGSSFATGLSEFKADALVSASVGHISSVSAAGGLVDVGADLP
                     TEDIPPEALLTQGLHEVTSLLVTEFTLDDVLRVILETIYRALGVSRTRAFFLLKDAAL
                     PKARFRFGMGQSPADMRTWMEVPLKGTQDLFVLALNQARDLVIKDLRSPDLDPLIPEW
                     YRATTLERRYAVLLPLVVNHKSVGLFYVDGDEAGAALLTATVLNNLKVLRSQAVLAIH
                     QSTLRSAARKR"
     gene            complement(2113..>2621)
                     /locus_tag="VFN38_05595"
     CDS             complement(2113..>2621)
                     /locus_tag="VFN38_05595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011267.1"
                     /translation="LKKQRMDGNSMDNPDAHCLPLGNMQLHTHPQPRKIIQTADVIVL
                     LYEGNAGVRQIFTDGRPLPGNDPQPWWFGYSTGRWDGDTLVVETTGFRDGGWLDVNGS
                     PLTDRGRMTERFRRTSYGFMDLEITVNDPKAYTRPWTVTIKQRLMPDDELIEFVCGEN
                     ERSSAHFQ"
BASE COUNT          401 a          862 c          891 g          467 t
ORIGIN      
        1 ccggcagcgc atgcttgacg ccgaggacga actgcacgtg cagcggcgct tcgatcaagc
       61 cgtcccgcac gtagttgatg gcgttgtaga gcatggccag gtcgaacact tcgatctccg
      121 gcttcacgcc gtaccggttc atcttgccgg ccagctcgag aatcagctcg ggcgggttct
      181 catagacgcg tgtggggaag ttgcacgacc cggtggagag cgacgccatg tccggcccca
      241 ggtgcagcat gccgccgcgc tccgagccca cgccggagcg tccgccggtg gagaactgca
      301 cgatcatgtc ggggcagtgg cggcgcagcc gttcctggaa gtccgcgaac ttgtccgggt
      361 tggacgtggt ggactgatcg tcgttgcgca cgtgcacgtg taccagcgcg gcgccggcct
      421 cgtagcaggc gtgcgtggac tcgatctgct cgctcaccgt gatcgggacg gccgggttgt
      481 tctctttgcg cggcaccgac cccgtgatgg cggctgtgat gatgcagggg tgtgacatca
      541 acgcttgcgc gccgccgagc ggagcgtact ctgatggatc gccagcacgg cctggctgcg
      601 cagcaccttg agattgttga ggacggtcgc cgtgagcagc gcggcacccg cttcgtcgcc
      661 gtcgacgtag aagagcccca cgctcttgtg attgaccacg agcggcagca gcacggcgta
      721 gcggcgctcg agcgtggtgg cgcggtacca ctccggaatc agcggatcga ggtcaggcga
      781 ccggagatcc ttgatgacca gatcgcgcgc ctggttcagc gccagcacga acagatcctg
      841 cgtgcccttg agtggcacct ccatccacgt gcgcatgtcg gcgggcgact ggcccatgcc
      901 gaagcggaac cgcgccttcg gcagcgccgc gtccttcagc aggaagaagg cgcgcgtgcg
      961 cgagacgccc agcgcgcgat agatggtctc gaggatcacg cgcagcacgt cgtcgagcgt
     1021 gaactccgtg accaggaggc tcgtgacctc gtggagcccc tgcgtcagca gcgcctcggg
     1081 cgggatgtcc tcggtcggca gatccgcgcc cacgtccacc aggccgcccg ccgccgacac
     1141 gctgctgatg tggccgacgc tggccgacac gagcgcatcc gccttgaact cgctgaggcc
     1201 ggtggcgaag ctgctcccct cgagattaag cttgaacgtc ttcgagtgct cgtgcagctc
     1261 ggtctcggcg ccggcgatca gcgtgtccat cgtcttgccg tcgagcccct tgaacggcgc
     1321 gccgtacgat ttcaccaggc gatcgatcgc ctgcttcttc actttcgggc tggcggacgt
     1381 agcgagcgcg tcggcgacgc cgttcgacag cgtggcgagc gcggccagct tctcctcgtc
     1441 ggtcatcgag gcgtgcgact gcgcgcccgt cacacggttc atgctctgca ggagcttttc
     1501 gggcaggttc aacgcgcgcg ccaccgacac gccgatcgac gagtaagaca tgccgagcac
     1561 cttcagcacg gcgaagtcct ggtgctgtgc accttccgag tggatggcct tggcctccgc
     1621 cggcaggtac agcgccacga gcgtgcgccc caggttgtgg aagagcgcgg tgatgaaggt
     1681 ttcttccttg tcggccagcg ccgtctgccc ggcgatcgag cgccccagga tcgcgctgta
     1741 gaacgacatg ttgagcgcgt cgaggagcgc cggcgtcttc gcctcggcct gcagcttctc
     1801 gaagatcatc aggcccagcg ccacgctgcg gacgcggtcg aaccccatga gcagcacggc
     1861 gcgcgacacg gtcgtcacct gaccgtgctg cgcgtaagcc accgtgttca cgagccgcag
     1921 cagcttctgc gccagcccgt agtcctgcag cacggtgtcc gcgagagcgc tgatcgaggt
     1981 gtcttcggac gacgtgagcg tgctgaccga gcccactgtc ttcgccatgg cggggaagtc
     2041 gccgctctcc cgcagccggg cgaggatcag ctcgacggct ggagaggtcg tcgccatctg
     2101 gaccttgtca tgttactgga agtgcgcgct ggaccgctcg ttctcgccgc acacgaactc
     2161 gatgagctcg tcgtccggca tcaggcgctg cttgatcgtg acggtccacg gacgcgtgta
     2221 cgccttcgga tcgttcaccg tgatctcgag gtccatgaat ccgtagctgg tgcggcggaa
     2281 gcgctccgtc atccggccgc gatcggtgag cgggctgccg ttcacgtcga gccaaccgcc
     2341 gtcgcggaat ccggtggtct ccaccacgag cgtgtcgccg tcccagcggc ccgtcgagta
     2401 gccgaaccac cacggctgcg gatcgttgcc ggggagcggc cgtccgtcgg tgaagatctg
     2461 ccgcacgccg gcgttgccct catagagcag cacgatgacg tcggcggtct ggatgatctt
     2521 gcgcggctgc gggtgcgtgt gcagctgcat gttgccgagc ggcaggcagt gcgcgtcggg
     2581 gttgtccatg ctgttgccgt ccatgcgctg cttcttcagc g
//
LOCUS       DASSYW010000350         2512 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1019639, whole genome shotgun sequence.
ACCESSION   DASSYW010000350 DASSYW010000000
VERSION     DASSYW010000350.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2512)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2512)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2512
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1019639"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(118..825)
                     /locus_tag="VFN38_05600"
     CDS             complement(118..825)
                     /locus_tag="VFN38_05600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HET9011268.1"
                     /translation="MVLDTGTPPTDSILVVDDEPQIRRVVRNALAAIASRVLEAATAR
                     EALDLAASAQPGLIVLDLNLPDRDGLEVCRDLRTFTGARILVLSARHTEPDKASLLDA
                     GADDYLTKPFGTLELQARVRALLRRSPGVAATLDDRVAIGDLEIHLSRRTVHRAGAEV
                     HLTPTEWGLLRALLTNRGRTMTHQQLFRAVWGQAEGDAQQYLRVYVGQLRRKLERDPV
                     RPALIRTEPAIGYRFVG"
     gene            complement(845..1321)
                     /locus_tag="VFN38_05605"
     CDS             complement(845..1321)
                     /locus_tag="VFN38_05605"
                     /inference="COORDINATES: protein motif:HMM:NF015853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type biogenesis protein CcmH"
                     /protein_id="HET9011269.1"
                     /translation="MRRLTAGAAWVAMLVFGATRPAVAAGQAAAPSRGDTSAVAAPAA
                     PSQPRDSALEARTSAVASQLRCPVCQGLSIQDSPSELAQSMRSVVRDQLAAGRTPDEV
                     KAYYVSKYGEWILLAPEASGFNLVAYLVPVVVVVGGILLIVVAVRRWTRGSGAAAT"
     gene            complement(1318..1920)
                     /locus_tag="VFN38_05610"
     CDS             complement(1318..1920)
                     /locus_tag="VFN38_05610"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin domain-containing protein"
                     /protein_id="HET9011270.1"
                     /translation="MNWRRASLAAALGLPLIGLFVFGLRHDPKEIPSPLPGKAAPPFA
                     LAVFAPGQPPLARPVGDTIRLADLRGQVVVLNFWASWCLACRDEHATLSALARQYAGK
                     PVHFVGSLYQDRTSAGTEWIAEMGGQSYPSVEDPKSRVAIDYGLYGVPETFIIAPDGR
                     VARKITGPAEGRLVTHIVDSLLAAPIAAAPGAAADSGRGP"
     gene            complement(1917..>2512)
                     /locus_tag="VFN38_05615"
     CDS             complement(1917..>2512)
                     /locus_tag="VFN38_05615"
                     /inference="COORDINATES: protein motif:HMM:NF027651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cytochrome c-type biogenesis CcmF C-terminal
                     domain-containing protein"
                     /protein_id="HET9011271.1"
                     /translation="GARARHVAHGEGWATALLRLVAGNRRRHGGYIAHLGVFLVALGV
                     TASSSLRTENEATLKPGETLTVAGRTVRLRDVWGREEPQRSVVGASMEVLRGGRVVGT
                     MEPRMNFYPMSQQPVPTPDVRSGPSGDLYLNLMAVRPDGSSATVKAIYEPLVPWIWFG
                     GGVVVFGAVLCAWPPRRRREAAVVSVVPPRPRQDTAA"
BASE COUNT          370 a          912 c          920 g          310 t
ORIGIN      
        1 agcgcgacgt gcgccttgtc gagccggccg cggaacagca cgagcaaggc cgtggcgccg
       61 gcgagcgcgg cgaaccagcc gagccaaagg cggagtcgca gccccatcgt ggtgcggcta
      121 ccccacgaac cggtagccga tcgccggctc ggtccggatc aacgccgggc gaacggggtc
      181 gcgttcgagc ttccggcgaa gctgcccgac atacacgcgg agatattgct gcgcgtcgcc
      241 ctcggcctgt ccccacacgg cgcggaagag ctgctggtgc gtcatcgtgc ggccgcgatt
      301 ggtgaggagc gcgcgcaaca ggccccactc tgtgggagtg agatgtacct cggcgccggc
      361 acggtgcacg gtgcgacgcg agaggtggat ctccagatcg ccgatcgcca cccgatcgtc
      421 cagggtggca gcgactcccg gcgaacgtcg cagcagcgcg cgcaccctgg cctggagctc
      481 gagggtgccg aacggcttcg tcaggtagtc gtccgccccc gcgtcgagca gcgaggcctt
      541 gtccggttcg gtgtgacgcg ccgacagcac caggatccgt gctccggtga acgtccgcag
      601 gtcacggcag acctcgagtc cgtcccgatc cggcagattc aggtcgagca cgatcagccc
      661 gggctgtgcc gaagcggcga ggtccagcgc ctcgcgtgca gtagccgctt cgagcacgcg
      721 cgaggcgatg gccgccagcg cgttgcggac gacgcgtcgg atctgtggct cgtcgtcgac
      781 gacgaggatc gagtcggtcg gaggagtgcc ggtgtccagg accatgacgg aaagctaacc
      841 ggcgtcaggt ggccgctgcg ccgctcccgc gcgtccaccg ccgcaccgcg acgacgatga
      901 gcaggatccc gcccaccacc accaccaccg gaaccaggta cgccacgagg ttgaacccgc
      961 tcgcctcggg cgcgaggagg atccactcgc cgtacttcga cacgtagtac gccttcactt
     1021 cgtccggcgt ccgccccgcc gcgagctggt cgcgcaccac cgagcgcatc gactgcgcga
     1081 gctcggacgg tgagtcctgg atcgagagcc cctggcacac cggacagcgg agctgcgacg
     1141 cgaccgccga cgtccgcgcc tccagcgcgc tgtccctcgg ttgcgatggc gccgccggcg
     1201 ccgcgacggc cgacgtgtcg ccgcgcgagg gcgcggcggc ctggcccgcc gctacggctg
     1261 ggcgggtggc gccgaagacg agcatcgcca cccacgcggc gccggccgtc agccgcctca
     1321 tggtcctctc cccgagtcgg ccgcggcgcc gggggcggcg gcgatgggcg cggcgagcag
     1381 cgagtcgacg atgtgcgtca cgagccggcc ttcggccggt ccggtgatct tgcgcgccac
     1441 tcggccgtcg ggagcgatga tgaaggtctc ggggacgccg tagagcccgt agtcgatcgc
     1501 gacgcgcgac ttgggatcct ccaccgaggg gtagctctgg ccccccatct cggcgatcca
     1561 ctccgtgccc gcgctggtac ggtcctggta cagcgagccg acgaagtgca ccggcttccc
     1621 cgcgtactgc cgcgccagcg cggagagcgt cgcgtgctcg tcgcggcagg ccaggcacca
     1681 cgacgcccag aagttcagca ccaccacctg tccgcggagg tcggcgagcc ggatggtgtc
     1741 gccgacggga cgcgcgagcg ggggctggcc gggcgcgaag accgcgagcg cgaacggcgg
     1801 cgccgccttg cccggcaggg gcgacgggat ctccttgggg tcgtggcgca gcccgaacac
     1861 gaacagcccg atgagcggga ggccgagtgc cgcggccagc gatgcgcgtc gccagttcat
     1921 gcggccgtgt cctgccgggg ccgcggcgga accaccgaca ccacggcggc ctcgcgccgg
     1981 cggcgggggg gccaggcgca caggacggcg ccgaacacga cgacccctcc gccgaaccag
     2041 atccacggca ccagcggctc gtagatcgcc ttcaccgtgg cgctgctgcc gtcggggcgc
     2101 accgccatca ggttcaggta gaggtcgccg gacgggccgc tgcgcacgtc gggggtgggg
     2161 accggctgct gcgacatggg atagaagttc atccgcggct ccatcgtgcc gacgacgcgc
     2221 ccgccgcgga gcacctccat cgaggcgccg accaccgacc gctgcggctc ctcgcgcccc
     2281 cacacgtcgc gcaggcgcac ggtgcgcccc gccacggtga gcgtctcgcc cggcttgagc
     2341 gtggcctcgt tctcggtgcg cagcgacgac gacgcggtga cgccgagggc gacgaggaag
     2401 acgccgaggt gggcgatgta cccaccgtgc cgccgccggt tgccggcgac gaggcggagc
     2461 agcgcggtcg cccatccttc gccatgcgcg acgtggcgcg cgcgcgcgcc ga
//
LOCUS       DASSYW010000351         2612 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1829246, whole genome shotgun sequence.
ACCESSION   DASSYW010000351 DASSYW010000000
VERSION     DASSYW010000351.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2612)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2612)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2612
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1829246"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..546)
                     /locus_tag="VFN38_05620"
     CDS             complement(<1..546)
                     /locus_tag="VFN38_05620"
                     /inference="COORDINATES: protein motif:HMM:NF024748.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HET9011272.1"
                     /translation="MDSSLLPTRQRPRAGFRFAPASFRVALALGVALAASAGAGAQAP
                     AAEPGLARLEAQIAELAKVSGGDVGVAVVHLESGRAVYLNRATGFPMASTVKVPIAVR
                     LLTQVDKGELRLDSMITVRPGDLHPGSGTLTDLFNQPGVVLSVRNLMELMLRISDNSA
                     TDILLRTAGGGAAVNARLAALG"
     gene            complement(555..1715)
                     /gene="menC"
                     /locus_tag="VFN38_05625"
     CDS             complement(555..1715)
                     /gene="menC"
                     /locus_tag="VFN38_05625"
                     /EC_number="4.2.1.113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA];
                     GO_process: GO:0009234 - menaquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="o-succinylbenzoate synthase"
                     /protein_id="HET9011273.1"
                     /translation="MSDRPATVQLDHIALREIRLPLKEPFRISSGVCTERRILLLQLR
                     DADGVEVWSECVAGEQPNYSAETIDTAWHAITTWIAPRVLGRRFDAPSALRPALERDF
                     RGHSMAKAAVEMGCWALAATRAGEPLARFLGGTQTHIPTGISLGIQASPEALAERALA
                     ARASGYRKIKLKIQPGADIHFVAAVREAVGPDIALMADANSAYTLGDAAHLARLDAFR
                     LTMLEQPLGRDDLVQHAELQRRLVTPICLDESIGDVDRARDMIFLGSGRVVNIKPGRV
                     GGFASAIAIHDTCRDAGLPVWCGGMLESGVGRAYNVALASLPNFRLPGDLSPSARYWE
                     NDIVTPEWTMDGDGRVAVPLERPGIGVVADADRIDDLTQRQEQLAAPIHALT"
     gene            complement(1721..>2612)
                     /locus_tag="VFN38_05630"
     CDS             complement(1721..>2612)
                     /locus_tag="VFN38_05630"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HET9011274.1"
                     /translation="TGGMVSPATARPGTAELPAGAIASEVEIRHVRTHEEFVQCVELQ
                     AATWGAGFRESVPATILKITQRLGGVTAGAYAPDGTLLGFIFGVTGIEHGTLVHWSDM
                     LAVDERAQNQGIGRRLKEFQREAVRAIGVSRMYWTYDPLVARNAHFNLNRLGARVAEY
                     VEDMYGADTGSALHSGLGTDRFIVVWPVGPAEREPADSDLSPALAAWRSAPILNDADL
                     QSLALLPPALARVEIPADIFQLQQDHMAEAVRWRDSTRRALQWALAIGYRIERFERDA
                     PGSRGFYLLARHPATTSAER"
BASE COUNT          367 a          927 c          952 g          366 t
ORIGIN      
        1 gcccagcgcg gcgaggcggg cgttcaccgc ggcgccgccg cccgcggtgc gcagcaggat
       61 gtcggtggcg gagttgtcgc tgatgcggag catcagctcc atcaggttgc gcaccgacag
      121 cacgacgccc ggctggttga acaggtcggt gagcgtcccg cttcccggat gcagatcgcc
      181 cggacggacg gtgatcatgc tgtcgagtcg gagctccccc ttgtccacct gggtgaggag
      241 gcgcaccgcg atcggcacct tcaccgtgct ggccatcgga aagccggtgg cgcggttcag
      301 gtagacggcg cggccgctct cgagatggac cactgcgacg cccacgtcgc cgcccgacac
      361 cttcgccagc tcggcgatct gtgcctcgag ccgcgcgagg ccgggctccg ctgcgggagc
      421 ctgcgcgccg gcgccggcgc tcgcggcaag tgcgacgccc agtgcgaggg cgacgcggaa
      481 cgacgcgggc gcgaaccgga atccggcgcg gggccgctgg cgggtgggaa gcagcgagga
      541 gtccatcgat ggcctcaggt gagagcgtga attggagcgg caagctgctc ctgccgctgc
      601 gtgagatcgt cgatccggtc cgcgtccgcc acgacgccga ttcccgggcg ctccagcggc
      661 accgcgaccc gaccgtcccc atccatcgtc cactcgggcg tcacgatgtc gttctcccag
      721 tatcgcgcgc tcggcgacag atcgcccggg agcctgaagt tgggcagcga cgcgagcgcc
      781 acgttgtacg cccggcccac gccgctctcc agcatcccgc cgcaccacac ggggagcccg
      841 gcgtcccgac aggtgtcgtg gatcgcgatc gccgacgcga agccgcctac ccggcccggc
      901 ttgatgttga cgacccggcc gctgccgagg aagatcatgt cgcgcgcccg gtcgacgtca
      961 ccgatcgatt cgtccagaca gatcggcgtc acgagccgcc gctggagctc ggcgtgctgc
     1021 accagatcgt cgcgcccgag cggctgctcg agcatcgtga gccggaaggc gtcgagccgc
     1081 gcgaggtgtg ccgcgtcgcc gagggtgtag gcggagttgg cgtcggccat cagggcgatg
     1141 tccggcccga ccgcctcccg caccgccgcc acgaagtgga tgtcggcgcc gggctggatc
     1201 ttcagcttga tcttccgata gcccgacgcc cgtgccgcga gtgcccgctc ggccagggcc
     1261 tccgggctgg cctggatccc cagcgagatc ccggtgggga tgtgcgtctg cgtcccgccg
     1321 aggaagcgcg ccagcggctc gcccgcccgc gtcgcggcga gcgcccagca tcccatctcc
     1381 accgccgcct tcgccatcga gtgtccgcgg aagtcgcgct ccagcgccgg ccggagcgcg
     1441 gacggcgcgt cgaaccgccg gccgagcacg cgcggcgcga tccaggtcgt gatcgcgtgc
     1501 cacgccgtgt cgatcgtctc cgcgctgtag ttcggctgct cgccggcgac gcactccgac
     1561 cacacctcca cgccgtcggc gtcccggagc tggagcagga ggatgcggcg ctcggtgcag
     1621 acccccgagg agatgcggaa cggctccttc agggggagtc ggatctcgcg cagggcgatg
     1681 tgatcgagct gcacggtggc tggccggtcg gacatcgggg tcagcgctcc gcggaggtgg
     1741 tggccggatg gcgcgcgagg aggtagaagc cgcgcgagcc gggagcgtcg cgctcgaatc
     1801 gctcgatgcg atagccgatg gccagggccc attggagcgc ccgtcgggtg gagtcgcgcc
     1861 atcgcacggc ctcggccatg tggtcctgct gaagctggaa gatgtcggcc gggatctcca
     1921 cgcgcgcgag cgcggggggg aggagagcga gcgactggag atcggcgtcg ttcaggatgg
     1981 gcgccgaccg ccacgcggcg agcgccggcg acaggtcgct gtcggcgggc tcgcgctcgg
     2041 ccgggccgac gggccagacg acgatgaagc ggtccgtgcc gaggccgctg tgcagcgcgc
     2101 tcccggtatc ggcgccgtac atgtcctcca cgtattccgc gacgcgcgcc cccagccgat
     2161 tcaggttgaa gtgcgcgttc cgcgcgacga ggggatcgta cgtccagtac atgcgcgaca
     2221 cgccgatcgc acgcaccgcc tcgcgctgga actccttgag ccggcgtccg atgccctggt
     2281 tctgggctcg ctcatccacg gcgagcatgt ccgaccagtg gacgagggtg ccgtgctcga
     2341 tgccggtcac gccgaagatg aagccgagca gcgtcccgtc cggcgcgtag gcccccgcgg
     2401 tgacgccgcc gagccgctgg gtgatcttga ggatggtcgc gggcacggac tcgcggaaac
     2461 cggcccccca ggtggccgcc tgcagctcga cgcactgcac gaactcctcg tgcgtgcgca
     2521 catggcgaat ctcgacctcg ctcgcgatgg ccccggcagg cagctccgcc gtgcctggac
     2581 gcgcggtggc gggactcacc ataccccccg tt
//
LOCUS       DASSYW010000352         2099 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1130131, whole genome shotgun sequence.
ACCESSION   DASSYW010000352 DASSYW010000000
VERSION     DASSYW010000352.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2099)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2099)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2099
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1130131"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..554
                     /locus_tag="VFN38_05635"
     CDS             <1..554
                     /locus_tag="VFN38_05635"
                     /inference="COORDINATES: protein motif:HMM:NF013073.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HET9011275.1"
                     /translation="SLGCITTDGDGSRRAMPLGSLLAPEERVKSGEVIGIGEQVTLFP
                     PDEGAITRSAQLYFEGTSYLWGGVTPWGADCSGLVQTVFWLHGIQLRRDAWQQAEQGA
                     AGESDPLESRKGDLLFFSDRVDAHITHVAIALGNQRLVHLALGRGGYAVENLLDVRDP
                     YVVKLRERFVKARRVLSPALLRA"
     gene            complement(555..938)
                     /locus_tag="VFN38_05640"
     CDS             complement(555..938)
                     /locus_tag="VFN38_05640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011276.1"
                     /translation="MPLRLARGLLAATALLLSACAMNPGINPRVEQEALTPPQPIGGG
                     GPALVGATPQQPVSLEILVRIDTLGRADLSTLSLTGQGVEANRQVVADWLRSARFEPA
                     KLNGYVVSGWFHFVAEAKAARLREY"
     gene            complement(1021..1947)
                     /gene="ligD"
                     /locus_tag="VFN38_05645"
     CDS             complement(1021..1947)
                     /gene="ligD"
                     /locus_tag="VFN38_05645"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF045432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-homologous end-joining DNA ligase"
                     /protein_id="HET9011277.1"
                     /translation="MTHDSAVTKSVTFSNLKKIYWPAERYTKGDLVEYYRAIAPWMLP
                     YLRNRPVVLTRFPDGIDGKSFYQKDAPEFAPAWMRVERIWSEETQREIRYFVCDDVES
                     VLYIANMGSIPLHIWASRVGMLEQPDWCVIDLDPKDAPFSDVVRTARVLHRICEAAAL
                     PNFVKTTGKTGLHILIPLGQQCTYAQSRMLGELLARLVLRELGDIATITRQVTRRGEK
                     VYLDYLQNRHGQTIVAPFSVRPLPGATVSMPLTWDEVDDGLDPRNYTIRNALARMERL
                     GADPVLPVLELRPDLAGVLHRLAEQLAAGRDA"
BASE COUNT          317 a          698 c          755 g          329 t
ORIGIN      
        1 tctcgctcgg gtgcatcacc accgacggtg acggcagtcg ccgcgcgatg ccgctcggat
       61 cactcctcgc gcccgaggag cgcgtcaaga gcggcgaggt catcggcatc ggcgagcagg
      121 tgacgttgtt cccacccgac gaaggggcga tcacgcgcag cgcgcagctc tacttcgaag
      181 ggacgagcta tctgtggggc ggcgtcacgc catggggcgc cgactgctcg gggctcgtgc
      241 agacggtgtt ctggctgcat ggcatccagc ttcgccgcga cgcatggcag caggcggagc
      301 agggcgcggc cggcgagtcc gatccgctgg agtcgcgcaa gggtgacctg ctcttcttct
      361 cggaccgcgt ggacgcgcac atcacgcacg tcgcgattgc gctcggcaac cagcgcctcg
      421 tgcacctggc actgggacgc ggcggctacg cggtggagaa cctgctggac gtgcgcgatc
      481 cctacgtcgt caagctgcgc gagcggttcg tgaaggcccg acgcgtcctc tcgcccgcgc
      541 tgctgcgcgc ctgatcagta ctcgcgcagc cgggcggcct tcgcttcggc cacgaagtgg
      601 aaccagccgc tcaccacgta gccgttgagc ttcgccggct cgaagcgcgc ggaccggagc
      661 cagtcggcga cgacctggcg attcgcctcc acgccctggc ccgtgaggct caacgtcgac
      721 aggtcggctc ggcccagcgt gtcgatgcgg acgaggatct cgagcgacac cggctgctgc
      781 ggcgtcgcgc cgaccagcgc cggaccgccg ccgccgatcg gctgcggcgg cgtgagcgcc
      841 tcctgctcga cccgcggatt gatgccgggg ttcatcgcgc aggcggacag caggagcgcg
      901 gtcgcggcga ggagcccgcg ggcgaggcga agcggcatga cgaaatctcc ctgacgtgga
      961 cggtgacgat cggcgtggca gatagccaga atcaggccgt gcggtggagt gtgtcgcgcg
     1021 tcacgcgtcg cgtcccgccg cgagctgctc cgccagccga tgcagcacgc cggcgagatc
     1081 cggccgcagc tccagcaccg gcagcacggg atcggcgccg agacgctcca tgcgcgcgag
     1141 cgcgttcctg atcgtgtagt tccgcgggtc gagcccgtcg tcgacctcgt cccacgtgag
     1201 cggcatcgac accgtggcgc cgggcagtgg acgcacgctg aacggcgcga cgatcgtctg
     1261 tccgtgccgg ttctggagat agtcgaggta caccttctcc ccacgcctgg tgacctgacg
     1321 cgtgatcgtg gcgatgtccc cgagctcgcg gaggacgagg cgcgccagca gctcgcccag
     1381 catgcgcgac tgcgcatagg tgcactgctg gccgagcgga atgaggatgt gcagccccgt
     1441 cttgcccgtc gtcttcacga agttcgggag cgccgcggcc tcgcagatgc ggtggagcac
     1501 gcgcgccgtg cgcaccacgt cggagaaggg ggcgtccttg ggatcgagat cgatcacgca
     1561 ccagtcgggc tgctcgagca tccccacccg gctcgcccag atgtggagcg ggatggagcc
     1621 catgttggcg atgtagagga ccgactcgac gtcgtcgcag acgaagtagc ggatctcgcg
     1681 ctgcgtctcc tcgctccaga tccgctcgac gcgcatccag gcgggggcga actcgggcgc
     1741 atccttctgg tagaacgact tgccgtcgat gccatcgggg aagcgcgtga gcacgacggg
     1801 gcggttgcgc aggtacggga gcatccacgg ggcgatcgcg cggtagtact ccacgaggtc
     1861 gcccttggtg taccgctcgg ccggccagta gatcttcttc aggttggaga aggtgacgga
     1921 cttggtgacg gcgctgtcgt gcgtcaccgc tggcgcggat gtgtcatccc gcacgaccga
     1981 gcgaagcgag ggcgtgtcgg gatccacttt cccgtgctcg tggctagcct ctgcgtcggg
     2041 agagtagatc ccgacactcg cttcgctcgt gcgggatgac agggggtcgt cgccgctcg
//
LOCUS       DASSYW010000353         3257 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1070958, whole genome shotgun sequence.
ACCESSION   DASSYW010000353 DASSYW010000000
VERSION     DASSYW010000353.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3257)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3257)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3257
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1070958"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..333
                     /locus_tag="VFN38_05650"
     CDS             <1..333
                     /locus_tag="VFN38_05650"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HET9011278.1"
                     /translation="QDKNVVEEITPAELAARMRAGADFDLIDVREPREWELTHLPGAR
                     LVPLGTLADAIPTLDASREIVVMCRSGKRSADAVRQLQAAGFGRVKNLNGGILRWGED
                     VDPSVPRY"
     gene            complement(368..1132)
                     /locus_tag="VFN38_05655"
     CDS             complement(368..1132)
                     /locus_tag="VFN38_05655"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025004.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate 2-dehydrogenase subunit 3 family
                     protein"
                     /protein_id="HET9011279.1"
                     /translation="MANDEQDDAAGGREPAMTIDRREAIRRVTALLGGIALVGGDALL
                     TGCRDRSSPLGRDAKFTAADVAFLDEVADTILPATATPGAKAAKVGAFMALMVTDTYD
                     ARDQQAFRDGMRTLDEASTREHDVPFVQATPQQRLALLQRLDREQKADADARAAARTA
                     RAGRATPADTAAAGDKHLPDERSRSAAGGEEGGAEAITKEPPAHYFRMMKELALLGYF
                     TSEIGYTQAMRYVESPGRFDPCVPYTPGERLWAPHA"
     gene            complement(1144..2823)
                     /locus_tag="VFN38_05660"
     CDS             complement(1144..2823)
                     /locus_tag="VFN38_05660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HET9011280.1"
                     /translation="MQAQEYDAIVVGSGISGGWAAKELTEKGLRVLLLERGRNVEHIK
                     DYVNATKAPWEYLHRGGRTKAMEEEYQVLKRDYPLNEKNLSFWVNDKESPYTETKRFD
                     WYRGYQVGGRSLMWGRQSYRWSDFDFEANAKEGIAVDWPIRYAELAPWYDKVERHAGI
                     AGSREGLAQLPDGEFQPAMPLNCGEELVAGKLGKLYDGRRRIIPGRTANATKALEGRS
                     PCQYRDACWLGCPYGAYFSTQSSTLPAAAKTGKLTLKPWSIVTELLYDRDRRRATGVR
                     VLDAITEQATDYSAKVIFVCASTLNSTWLLMRSATDVWPGGLGSSSGELGHNLMDHHF
                     RCGAEGELEGLEDKYYYGRRPTGFYIPRYRNLFGEKRDYLRGFGYQGSAGRQGWSRAV
                     AELGVGGAFKDAMAMPGKWTVGATAFGEMLPSHANMIGLDATKKDKWGLPVLRIDCAT
                     GENEARMRKDMIADMADMLEQTGVKKVKTYDNDYFPGMGIHEMGTARMGRDPKTSVLN
                     AHNQVWDAPNVFVTDGSCMTSAACQNPSLTYMALTARAADFAVSELNRRNL"
     gene            3042..>3257
                     /locus_tag="VFN38_05665"
     CDS             3042..>3257
                     /locus_tag="VFN38_05665"
                     /inference="COORDINATES: protein motif:HMM:NF024845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-TFIIB domain-containing protein"
                     /protein_id="HET9011281.1"
                     /translation="MHCPVCKPERSLELAPLEEDKLAARRCPSCNGHFLRSADYWRWR
                     AVAGDNLPSMPAATDARSAPEAAGLRLC"
BASE COUNT          422 a         1195 c         1110 g          530 t
ORIGIN      
        1 caggacaaga acgtagttga agagatcacc cccgcggagc tggcggccag gatgcgcgcc
       61 ggcgcggact tcgacctgat cgacgtgcgc gagccgcgcg agtgggagct cacgcacctg
      121 ccgggcgcgc ggctcgtgcc gctcggcacc ctcgccgacg ccatcccgac gctggacgcg
      181 tcgcgcgaga tcgtcgtcat gtgccggagc ggcaagcgca gcgccgacgc cgtgcggcag
      241 cttcaggccg cgggctttgg ccgcgtgaag aacctgaacg gcgggatcct gcgctggggc
      301 gaggacgtcg atccctccgt tccgcggtac tgaccggggg cgccgtcgga cgccatcggc
      361 ctggcggcta ggcgtgcggc gcccagagcc gctcgcccgg cgtgtagggc acgcacgggt
      421 cgaagcgccc cggcgactcc acgtaccgca tcgcctgcgt gtagccgatc tccgaggtga
      481 agtagccgag cagcgcgagc tccttcatca tgcggaagta gtgcgccggg ggttccttcg
      541 tgatcgcttc ggcgccaccc tcctcgccgc ccgcggcgct cctgctccgc tcgtcgggaa
      601 ggtgcttgtc gccggccgcg gcggtgtcgg cgggagtggc gcggcccgct cgcgccgtgc
      661 gcgccgcggc gcgcgcgtcg gcatcggcct tctgctcgcg gtccagccgc tggagcagcg
      721 cgagccgctg ctgcggcgtc gcctgcacga acgggacgtc gtgctccctc gtgctcgcct
      781 cgtccagcgt gcgcatcccg tcgcgaaacg cctgctggtc gcgcgcgtcg tacgtgtcgg
      841 tcaccatgag ggccatgaac gcccccacct tggccgcctt cgcgcccggc gtcgccgtgg
      901 cggggaggat cgtgtccgcc acctcgtcca ggaaggcgac gtccgcggcg gtgaacttcg
      961 cgtcgcgccc cagggggctg gaacgatcgc ggcagccggt gagcagggca tcccccccca
     1021 ccagcgcgat gcccccgagc agcgcggtga cgcgccggat cgcctcgcgc cgatcgatcg
     1081 tcatggccgg ctcgcgtccg ccggccgcgt cgtcctgctc gtcgttcgcc atgaggatcc
     1141 cggtcagagg ttgcggcgat tgagctcgct caccgcgaag tccgcggcgc gcgccgtgag
     1201 cgccatgtag gtgagcgacg ggttctggca ggcggccgag gtcatgcacg agccgtccgt
     1261 gacgaacacg ttcggcgcgt cccacacctg gttgtgggcg ttgagtaccg acgtcttggg
     1321 gtcgcggccc atgcgcgccg tgcccatctc gtggatgccc atccccggga agtagtcgtt
     1381 gtcgtacgtc ttcaccttct tcacgccggt ctgctcgagc atgtccgcca tgtcggcgat
     1441 catgtccttg cgcatgcgtg cctcgttctc gccggtggcg cagtcgatcc gcagcacggg
     1501 cagcccccac ttgtccttct tcgtcgcgtc cagcccgatc atgttcgcgt ggctggggag
     1561 catctccccg aacgccgtgg cgcccaccgt ccacttgccc ggcatcgcca tggcgtcctt
     1621 gaaggcgccc cccactccca gctctgccac cgcgcgcgac cagccctgcc gtcccgcgct
     1681 cccctggtac ccgaagccgc gcaggtagtc gcgcttctcg ccgaacaggt tgcggtaccg
     1741 cgggatgtag aagccggtgg ggcggcggcc gtagtagtac ttgtcttcca gcccctccag
     1801 ctccccctcg gcgccgcagc ggaagtggtg gtccatcagg ttgtggccca gctcaccgga
     1861 gctgctgccc agcccaccgg gccacacgtc ggtggccgag cgcatgagga gccaggtgga
     1921 gttgagcgtg gaggcgcaga cgaagatgac cttcgccgag tagtcggtgg cctgctcggt
     1981 gatcgcgtcg agcacccgca cgcccgtggc gcgccggcgg tcgcggtcgt acagcagctc
     2041 cgtgacgatg gaccagggct tgagcgtgag cttcccggtc ttggccgccg ccggcagggt
     2101 ggaggactgc gtgctgaaat aggctccgta cggacagccc agccagcagg catcgcggta
     2161 ctggcagggg gaccgtccct ccagcgcctt cgtcgcgttc gccgtgcggc ccgggatgat
     2221 gcggcggcgc ccgtcgtaca gcttgcccag cttgccggcc accagctcct cgccgcagtt
     2281 gagcggcatg gcgggctgga actcgccgtc ggggagctgc gccagcccct cgcgcgaccc
     2341 cgcgatcccg gcgtgccgct ccaccttgtc gtaccagggc gcgagctccg cgtagcggat
     2401 cggccagtcc accgcgatcc cctccttcgc gttcgcctcg aagtcgaagt cgctccagcg
     2461 atagctctgg cgtccccaca tcagggagcg gccccccacc tggtagccgc gataccagtc
     2521 gaaccgcttc gtctccgtgt acggcgactc cttgtcgttc acccagaacg agaggttctt
     2581 ctcgttgagg gggtagtcgc gcttgaggac ctggtactcc tcctccatcg ccttcgtgcg
     2641 gccgccgcgg tggagatact cccacggcgc cttcgtcgcg ttcacgtagt ccttgatgtg
     2701 ctccacgttg cggccgcgct ccagcagcag cacccgcagc cccttctccg tgagctcctt
     2761 cgcggcccag ccgcccgaga tccccgatcc caccacgatc gcgtcgtact cctgagcctg
     2821 caccgatgcc tccccgcgtt gcggacgacg gcgtggatcc gacgatggac cggccggcga
     2881 gcggttccag ccggtcggtc cgcgaatatg cgggggtggc ggaaggttgg cgagtggggg
     2941 tgcggcgacg cggcccccgc acgaaattca tcgagtgagc ccgccctccc gatgacggca
     3001 agcgccatcg atcgtcgatc ctcgtcaccg tcccgagagc catgcactgt cccgtctgca
     3061 aacccgagag atcgctcgag ctggcgccgc tggaggaaga caagctcgcc gcgcggcgct
     3121 gcccgagctg caacggccac ttcctccggt cggccgacta ctggcgctgg cgcgccgtcg
     3181 ccggcgacaa cctgccatcg atgcccgccg cgacggatgc gcgctcggcg ccggaggcgg
     3241 ccggcctgcg tctctgc
//
LOCUS       DASSYW010000354         4407 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_59205, whole genome shotgun sequence.
ACCESSION   DASSYW010000354 DASSYW010000000
VERSION     DASSYW010000354.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4407)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4407)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4407
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_59205"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            158..985
                     /locus_tag="VFN38_05670"
     CDS             158..985
                     /locus_tag="VFN38_05670"
                     /inference="COORDINATES: protein motif:HMM:NF025029.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein L,D-transpeptidase catalytic domain
                     family protein"
                     /protein_id="HET9011282.1"
                     /translation="MRPPKYLQNVLVGASALLFAGAHFAPNREQNGPVLTAAVTFVSP
                     KPAESAMSTKGTGTVATVTKAALDAFAGAVRPLSRPQALETAFRSYFAYKTTHPNEVR
                     KPYLYFVDYGLPSTTPRGYVFDMESLRIVDGPFTVAHGRGSSASQFGVPTRFSNASGS
                     AATSLGLYVAKSLYDFHGHASGQAYSAVGMRLMGVSEGFNDNAFARRVVAHGAPYVTP
                     SKAGRSEGCPAMEPARAQQLLPKLADGGMVFLFAPDENWMARDPWIATGAATQAQGG"
     gene            1023..1544
                     /locus_tag="VFN38_05675"
     CDS             1023..1544
                     /locus_tag="VFN38_05675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011283.1"
                     /translation="MLDRDVAAQVDQEGRMSSTRRAVRSALIVAGMVSLVGVSSALAQ
                     RSEKRYGFGAPPAPPSQPTVPYPGATVTIDPRWYRMQQPQPAHRQQQPRYPQYPTAYY
                     VPAPAYYPSGGGTVYDTNGRPLYTGFEAAPSSVNNDFPVATPDLTGSPYVVIEGGTMI
                     VDFGNGDRRAVPS"
     gene            1551..1724
                     /locus_tag="VFN38_05680"
     CDS             1551..1724
                     /locus_tag="VFN38_05680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011284.1"
                     /translation="MEQASTPDGQPRTLFYRPPVYGLVLRQGQRGQVLGRPTAGARVC
                     YTSDAYGRVVLDY"
     gene            complement(1911..2942)
                     /locus_tag="VFN38_05685"
     CDS             complement(1911..2942)
                     /locus_tag="VFN38_05685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016811 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in linear amides
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetamidase/formamidase family protein"
                     /protein_id="HET9011285.1"
                     /translation="MSIPRTLLALIVGASSAAAQSRTVHRLDATPATVAYGYYWSEAT
                     PALHVHSGDMVDVETMLTNTPTGLERIGVKPADVPRHLRDIVAQDTGSLKGPGGHILT
                     GPIYVEEADSGDVLEVRIRRITLPLAYGYNGCSGFVRELCGEQRVSTLIHLDRKAMTA
                     EVAPGIVVPLRPFFGSIGVAPAAAFGRVSSNPPGRHAGNLDNRELVAGTTLYIPVFVK
                     GALLELGDGHAAQGDGEVDQTAIETNLEGRIQVIVRKDMKLEWPRAETPSHWIAMGTD
                     TSLVVATKTAVREMVKLLQDKTGITQVQAYQAASMAADAHITQLVDGNVGVHMMIPKR
                     YLVGTKTRR"
     gene            3083..>4407
                     /locus_tag="VFN38_05690"
     CDS             3083..>4407
                     /locus_tag="VFN38_05690"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HET9011286.1"
                     /translation="MPDDRSRSALDAHVEQQPLTQALLDVANVHFATYVTNAPGMIYQ
                     FMYLADGGRKFTVVSEASRSLVGVAPAEILRDPEALFGLVHPEDRPSMHESAEASRKA
                     LAPWSWEGRAVLASGELKWLRAGSRLTPQPDGSIICDGVIMDVTALRSAATRLEESEQ
                     RYRSLFDHHPDAVFSLDVAGNLLSANPGCERICGFAPSELIGRTFAPFLPPDQIEHVS
                     AHFKAAVGGEAQSFETAIRHRTGRLVEIDVVNIPIVVGGRVTGVFGIVRDMSDRRALE
                     ARLRQAQKMEAVGQLAGGVAHDFNNILAAIMGFAELLVEDLADDERRRGDVEEILKSA
                     RLGAGLTRQLLAFSRKQVLQPVALDLNEVVSDTATMLRPLLVASMQLVTRTADHPVRV
                     LVDRSQLEQVLLNLALNARDAMPLGGVLTIGVGIAESHGGAPSRALLTV"
BASE COUNT          667 a         1487 c         1529 g          724 t
ORIGIN      
        1 gtgccaacac tttacgtgac gcaaagcaca cgatagatta ttcgatcctg ccggtgaaac
       61 gtttgattcc gggcgtggtc cctcccactc ctcccgtccg tttcgcctaa ccatcccgcc
      121 gcgccgacca ccgcgccgat ccccggagag cacgctgatg cgtccaccga agtatctcca
      181 gaacgtcctc gtgggcgcga gcgcgctcct gttcgctggc gcgcatttcg ccccgaaccg
      241 cgagcagaac ggtcccgtgc tcacggcggc ggtgaccttc gtcagcccca agccggcgga
      301 gtccgcgatg tcgaccaagg gaacgggtac ggtggccacg gtgaccaagg ccgcgctcga
      361 cgcgttcgcc ggggcggtgc gtccgctgag ccggccgcag gcgctcgaga cggcgttccg
      421 cagctacttc gcctacaaga cgacgcaccc gaacgaagtg cggaagccgt acctctattt
      481 cgtggactac gggctgccga gcacgacgcc gcgcggctac gtgttcgaca tggagtcgct
      541 gcggatcgtg gacggcccct tcaccgtcgc gcacgggcgg ggctcgtcgg ccagccagtt
      601 cggcgtgccc acgcgattct ccaatgcgtc gggaagtgcc gccacctcgc tcggtctcta
      661 cgtcgccaag tcgctctacg atttccacgg ccatgcgtcg gggcaggcct actccgcggt
      721 gggcatgcgg ctgatgggcg tgtcggaagg attcaacgac aacgccttcg cgcggcgcgt
      781 cgtggcgcat ggcgcgccct acgtcacgcc gtccaaggcc gggcggagcg aggggtgccc
      841 agcgatggag ccggcgcgtg cgcagcagct gctcccaaag ctcgccgacg gcgggatggt
      901 gttcctgttc gccccggacg agaactggat ggcgcgcgat ccctggatcg cgacgggcgc
      961 ggcgacgcag gcgcagggcg ggtgaccttc cggcaacccg tgcgggtccg tagggtagga
     1021 ccatgctcga tcgggacgtc gcggcgcagg tggaccagga gggacggatg agcagcacac
     1081 gtcgcgcggt gcggtccgcg ctgatcgtcg ccgggatggt gagcctcgtg ggcgtgtcga
     1141 gcgcgctcgc gcagcgctcc gagaagcggt acggattcgg tgcacccccc gcgccgccgt
     1201 cacaacccac ggtgccctac ccgggcgcca cggtgacgat cgatccgcgc tggtaccgga
     1261 tgcagcagcc gcagcccgcg catcgccagc agcagccgcg gtatccccag tatccgaccg
     1321 cgtactacgt cccggcgccg gcctactatc cctcgggcgg gggcacggtg tacgacacga
     1381 acggccgtcc gctgtacacc gggttcgagg cggccccgtc gtcggtgaac aacgacttcc
     1441 cggtcgcgac ccccgacctc accggatcgc cctacgtggt gatcgagggg ggcacgatga
     1501 tcgtcgattt cggcaacggc gatcggcgcg cggtgccgtc gtgagccgcg gtggaacagg
     1561 cgagcacccc ggacgggcag ccccgcacgc tgttctatcg cccgccggtc tacgggctcg
     1621 tcctgcgcca gggccagcgc ggtcaggtgc tcggcaggcc gaccgccggc gcacgggtgt
     1681 gctacacgag cgacgcctac ggccgagtgg tcctggacta ctgaacgtcg cgatcagcgc
     1741 cctccgggaa ctgcaaacgg caacggcaac ggcaacggca ttaccacaga ggacgcagag
     1801 gtcacagagg actgcaacga catgttgcag tcctcttttt atctgcgtct tctgcgttca
     1861 tctgcgtcat ctgtctcatc tgcgttcttc atttctcttc acctaccggc tcagcgccga
     1921 gtcttcgttc caacgagata gcgtttgggg atcatcatgt ggacgcccac gttgccgtcc
     1981 acgagctgtg tgatgtgagc gtcggcggcc atcgaggcgg cctgataggc ctgcacctgg
     2041 gtgatcccgg tcttgtcctg cagcagcttc accatctcgc ggaccgccgt cttcgtcgcc
     2101 acgacgagcg acgtgtccgt gcccatggcg atccagtgac tcggcgtttc ggcgcgcggc
     2161 cactcgagct tcatgtcctt gcgcacgatc acctggatcc gcccttcgag gttggtctcg
     2221 atcgccgtct gatcgacctc gccgtcgccc tgcgcggcgt gaccgtcgcc cagctccagg
     2281 agcgcgccct tcacgaacac ggggatgtac agcgtcgtgc ctgccacgag ctcgcggttg
     2341 tcgaggttgc ccgcgtgtcg gcccggcggg ttgctgctca ctcggccgaa cgcggcggcc
     2401 ggcgccacgc cgatggagcc gaagaagggg cggaggggaa cgacgatgcc gggcgcaacc
     2461 tccgccgtca tcgccttgcg gtcgagatgg atgagcgtgc tcacgcgctg ctcgccgcac
     2521 agctcgcgca cgaagccgct gcatccgttg tagccgtatg cgagcgggag cgtgatgcgt
     2581 cggatgcgca cctcgagcac gtcacccgag tcggcctcct cgacgtagat cgggccggtg
     2641 aggatgtgac cgccaggccc cttcaacgag ccggtgtcct gcgcgacgat gtcgcgcaga
     2701 tgccgcggca cgtctgcggg cttcacgccg atccgttcga ggccggttgg cgtgttggtg
     2761 agcatggtct cgacgtccac catgtcgccg gaatggacat gcagggccgg cgtcgcttcc
     2821 gaccagtagt agccgtaggc gaccgtggcc ggtgtcgcgt ccagtcgatg aaccgtacgg
     2881 gactgtgcgg cggcggatga ggcgccgacg atgagcgcga ggagcgttct cgggatcgac
     2941 atgggtggcg gggcgaaggg tggggcgaag gtaacattgc gccgtcgggg gtggaggtcc
     3001 cgaacctgct tgtcgagact gagagacgca cggatcggcg ccaatgggca gcgtcggccg
     3061 gcgctctccc cgtcatcccg cgatgccaga cgacagatcc cgatcggccc tcgacgccca
     3121 tgtcgaacag cagccgctga cgcaggcgct gctcgacgtc gcgaacgtgc atttcgcgac
     3181 gtacgtgacg aacgcgcccg gcatgatcta tcagttcatg tacctggcgg acggcgggcg
     3241 gaagttcacg gtggtgagcg aggcttcgcg gtcgctcgtc ggggtggcgc cggcggagat
     3301 cctccgcgat cccgaggcgc tcttcgggct cgtgcatccc gaggatcggc cgagcatgca
     3361 cgagtcggcg gaggcgtcgc gcaaggcgct cgcgccgtgg agctgggaag ggcgcgccgt
     3421 cctcgcctcg ggcgagctga agtggctccg cgccggatcg aggctcacgc cgcagccgga
     3481 cggcagcatc atctgcgatg gcgtgatcat ggacgtcacc gcgctgcgct cggccgccac
     3541 gcggctggaa gagagcgagc agcgctatcg ctcgctgttc gatcaccatc cggacgcggt
     3601 gttctcgctc gacgtcgccg gaaacctcct cagcgccaat ccggggtgcg agcggatctg
     3661 cggcttcgct ccgagcgagc tcatcggccg taccttcgcg ccgttcctcc cgccggacca
     3721 gatcgagcac gtgtcggcgc acttcaaggc tgcggtcggc ggcgaggcgc agagcttcga
     3781 gacggcgatt cgccatcgca ccggccgcct cgtggagatc gacgtggtga acatcccgat
     3841 cgtcgtcggc gggcgggtga ccggcgtgtt cggcatcgtg cgggacatgt cggatcgtcg
     3901 cgcgctcgag gcgcggcttc ggcaggcgca gaagatggaa gcggtcggac agctcgctgg
     3961 cggcgtggcg cacgacttca acaacattct cgccgcgatc atgggattcg ccgagctgct
     4021 ggtggaggac ctggcggacg acgagcgacg gcgcggcgac gtggaggaga tcctcaagag
     4081 cgcgcggctc ggcgccggcc tcacgcggca gcttctcgcc ttcagtcgca agcaggtcct
     4141 gcagcccgtc gcgctcgacc tgaacgaggt ggtgtccgac accgccacca tgctgcgccc
     4201 gttgctcgtc gcttcgatgc agcttgtcac gcgcacggcc gaccatcccg tgcgcgtgct
     4261 ggttgaccgc tcgcagctgg agcaggtgct gctgaatctc gcgctcaatg cacgcgacgc
     4321 catgccgctg ggcggcgtgc tcacgatcgg ggtgggcatc gcggagagcc acggcggcgc
     4381 tccgtcccgc gccttgctca cggtgag
//
LOCUS       DASSYW010000355         2506 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_602299, whole genome shotgun sequence.
ACCESSION   DASSYW010000355 DASSYW010000000
VERSION     DASSYW010000355.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2506)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2506)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2506
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_602299"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(23..2476)
                     /locus_tag="VFN38_05695"
     CDS             complement(23..2476)
                     /locus_tag="VFN38_05695"
                     /inference="COORDINATES: protein motif:HMM:NF012471.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004181 - metallocarboxypeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M14 family zinc carboxypeptidase"
                     /protein_id="HET9011287.1"
                     /translation="MPRLLRPRLALIAVLALLQAACASAPRTPDASRDARHGARASSA
                     VPAPAAVLGFEPGADRKLPAWSQVVDYFTRLDAASPRVVVRTLGRTTMGRPFIAAFIG
                     DSATIADLPRYADIQRRLADPRLRRGGPGERDSLIAAGKAVVLVTSSIHSDEVGGILA
                     PLVLAHRLASAEDDEARRIRAGAITILVPSLNPDGVDIVGDWYRSTLGTRYEGAGVPV
                     LYHKYTGHDNNRDWYAFTQVETRLTVDSLHNVWHPEVVNDIHQQGAYGSRIFLPPYLQ
                     PVEPNVDSLVIAGVDSLGRSVARRLRAEGRQGVVTDAIYDAWTPARAYQHYHGGARIL
                     TETASARLASPIVLTRDSLRAGRGYDARRTSANFPVLWPGGRWTLADIVSYQASAAWA
                     ILATTAAERASWLERFARVGERAVAGRATEGRADWPVAFVIPQQQPDQVPLRELLRVL
                     QRGGVEVRRATSPFASGNVRYSAGAYVVLEGQPYFAFAKALLESQRYPDLRDSTGAPR
                     RPNDVTAHTLPLLMGVGVGVVRDSFPVPTTEPIAMVDERPAIAPGLSAGSCAGAAASA
                     CRPRRIAVYRSWSATEDEGWTRWVLDRYGVPFTSLTDSDVRAGDLGARYDVVVLPDQA
                     PEEIADGLSRAEFPDSLAGGLGAAGAAALRAFVDGGGTLVALNRASRWAIDALGLPVR
                     DVLAGVSNREFYAPGSILALTLDRSHPMARDVVARPTAWFESGPAFEVADPSRVRVVA
                     AYPADGEPLLSGWLLGGARLRGRAALVDVTQGRGHVVLFGFRPQYRGQSLATYPLLWG
                     ALREWSAVGGARSAGASDR"
BASE COUNT          352 a          894 c          970 g          290 t
ORIGIN      
        1 agatgggcgg gcatggcgat ggctatcggt cggaggcgcc ggccgaccgc gcaccaccca
       61 ccgccgacca ctcccgcagc gctccccaga gcagcggata ggtggccagg ctctgtccgc
      121 gatactgcgg ccggaatccg aagaggacga cgtggccgcg cccctgcgtc acgtccacca
      181 gcgcggccct gccgcgcagc cgcgcgccgc cgagcagcca gcccgagagc aggggctcgc
      241 cgtcggcggg gtacgcggcg acgacgcgaa cgcgtgacgg atcggcgacc tcgaacgcgg
      301 ggccgctctc gaaccaggcg gtcggacgcg cgaccacgtc gcgcgccatc gggtgggagc
      361 gatcgagcgt cagcgcgagg atcgatcccg gcgcgtagaa ctcgcggttc gagacgccgg
      421 cgaggacgtc acgcacaggc aggccgaggg cgtcgatcgc ccagcggctc gcccggttga
      481 gggcgacgag cgtccctccc ccgtccacga aggcgcgcag tgcggcggcg ccggcggcgc
      541 cgagcccgcc ggccagcgag tccgggaact cggcgcgcga gagcccgtcg gcgatctcct
      601 ccggcgcctg atcggggagc acgacgacgt cgtagcgcgc gccgaggtcg cccgcccgca
      661 cgtcgctgtc ggtgaggctc gtgaagggaa cgccgtagcg gtcgagcacc caccgcgtcc
      721 agccttcgtc ctcggtcgcg ctccagctgc gatacacggc gatgcgccgc ggccggcagg
      781 cgctcgcggc ggcgcccgcg caggagccgg ccgagagccc gggcgcgatc gcgggccgct
      841 cgtccaccat cgcgatcggc tcggtggtcg gcaccgggaa ggagtcgcgc accacgccga
      901 cgccgacccc catcagcagc ggcagggtgt gcgcggtgac gtcgttgggg cgccggggcg
      961 cgccggtcga gtcgcgcaga tcggggtagc gctgcgactc cagcagcgcc ttggcgaacg
     1021 cgaagtacgg ctgcccttcg agcacgacgt aggcgccggc cgagtagcga acgttgccgc
     1081 tcgcgaacgg ggacgtcgcc ctccgcacct ccaccccgcc ccgctggagg acgcgaagca
     1141 gctcgcgcaa cggcacctgg tccggctgct gctgcgggat gacgaacgcc accggccagt
     1201 ccgcccgtcc ctccgtcgcc cggccggcga cggcgcgctc gccgacgcgg gcgaaccgct
     1261 ccagccagct cgcgcgctcg gcggcggtcg tggcgaggat cgcccacgcc gcgctcgcct
     1321 ggtagctcac gatgtcggcg agcgtccagc gcccgcccgg ccagaggacg gggaagttgg
     1381 ccgaggtgcg ccgcgcgtcg taaccgcggc cggcgcgcag cgagtcgcgc gtcaggacga
     1441 tcggggaggc gaggcgggcg ctcgccgtct cggtgaggat gcgcgccccg ccgtggtagt
     1501 gctggtaggc gcgagccgga gtccaggcgt cgtagatggc gtcggtcacg accccctgac
     1561 gcccctcggc gcgcagccgc ctcgccaccg agcgccccag cgagtcgacg ccggcgatga
     1621 cgagcgagtc cacgttgggc tcgaccggct gcaggtacgg cgggaggaag atgcgcgagc
     1681 cataggcgcc ctgctggtgg atgtcgttga cgacctcggg gtgccagacg ttgtgcagcg
     1741 agtccaccgt caggcgcgtc tccacctgcg tgaaggcgta ccagtcgcga ttgttgtcgt
     1801 gccccgtgta cttgtggtac agcaccggaa cgccggcgcc ctcgtatcgt gttcccagcg
     1861 tcgagcggta ccagtcgccg acgatgtcca cgccgtcggg attgagcgac ggcacgagga
     1921 tcgtgatcgc cccggcgcgg atgcggcgcg cctcgtcgtc ctccgcgctc gccagccggt
     1981 gggcgaggac gaggggggcc aggatccctc cgacctcgtc ggagtggatg ctcgacgtca
     2041 cgaggacgac ggccttgccg gcggcgatga gcgagtcgcg ctcccctggt ccgccgcgac
     2101 ggagccgcgg gtcggccagg cggcgctgga tgtcggcgta gcgcggcagg tcggcgatcg
     2161 tggcggagtc gccgatgaag gcggcgatga aggggcggcc catcgtcgtc cggcccagcg
     2221 tccgcacgac gacgcgcgga ctcgccgcgt cgagccgcgt gaagtagtcc acgacctgcg
     2281 accaggcggg cagcttgcgg tccgcgcccg gctcgaagcc gagcaccgcg gccggcgcgg
     2341 ggaccgccga cgaggcgcgc gcgccgtgcc tcgcgtcgcg cgacgcgtcc ggggtccggg
     2401 gcgccgaggc acatgcggcc tggagcagcg cgaggacggc gatgagagcg agacgcggac
     2461 ggagaaggcg cggcatcgag gagggatgag tgttcagagg ggcgat
//
LOCUS       DASSYW010000356         2621 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1290208, whole genome shotgun sequence.
ACCESSION   DASSYW010000356 DASSYW010000000
VERSION     DASSYW010000356.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2621)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2621)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2621
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1290208"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1746)
                     /locus_tag="VFN38_05700"
     CDS             complement(<1..1746)
                     /locus_tag="VFN38_05700"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HET9011288.1"
                     /translation="MFLSDISIKRPVFATMMMVALVVLGIISYDRLAIDEYPDITYPI
                     VIAQTTYPGASPDVMMRDISKPIEEALNTVQGIKEISSTSLEGVSIVRLQFNLGVDVA
                     VAQQDVQAKVARIRRTLPPDIQDPIIQHFDPNDSPIMAIALTSKERPIREITDLANEV
                     VSTRLESIPGVGGVNIIGGNARQIRVQVDPAAMRAYGLSPGQLTAALQRENQEVPAGR
                     IEGGATERLVRVTGRIVDPKSFADIPVAVRSGTPVRISDVATVVDGAENRRTAAEIFS
                     DTSSTPAVSLEVLKISGSNTVEVADAVKAMVKELERQLPQDIQMTVIRDDSRRIRESL
                     ADVQVSIVLGAALTIMIIYLFLNSWRSTVITGLTLPISIISAFFIMWVFNFTVNTMTL
                     LALSLAIGLLIDDAIVVRENIVRHLEMGKSHDDAAREGTSEIGLAVMSTSFAVVAVFI
                     PVAFMGGIIGKIFFQFGVTVAFAVLVSLFVSFTLDPMLSSKWADPEVEHAVNDGGEHM
                     AEQRRHANPIRRVAFAFNDRFERLADHYPRWLGWALGHRLIVLATAAATIVLSFVIIP
                     RLGFTWMPDVNGDEFT"
     gene            complement(1795..>2621)
                     /locus_tag="VFN38_05705"
     CDS             complement(1795..>2621)
                     /locus_tag="VFN38_05705"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HET9011289.1"
                     /translation="FEASEQESGRKSAEADRIAAQSDLANAEWTLEQNEQLLKAGAIA
                     QQAYKSSQQAVIAARARVAAAEARLSATGNQARDTRVVAPSSGIVSKRLVEPGEHLAK
                     GAAMFTIVRNGTLELAAAVPARQSTALRTGQIVHFVADGRRFDGRVARVNPTIDPATR
                     AVTVYVQVPNPGGTIRGGTFATGRVVSRTLSNVLGVPTAALRQSPEDGKPFVYRVDGK
                     TINVAPVQLGAVDERLGIAEVTSGLQAGERVIVGNVGTLGRGMQVTIAGQETAGRR"
BASE COUNT          398 a          852 c          943 g          428 t
ORIGIN      
        1 cgtgaactcg tcgccgttca cgtcgggcat ccaggtgaag ccgaggcgcg ggatgatgac
       61 gaagctgagg acgatggtgg ccgccgcggt ggcgagcacg atgaggcggt ggcccagcgc
      121 ccagccgagc cagcgcgggt agtggtcggc cagccgctcg aaccggtcgt tgaaggcgaa
      181 ggcgacgcgg cggatcgggt tggcgtgccg ccgctgctcg gccatgtgct ccccgccgtc
      241 gttcacggcg tgctccacct cgggatcggc ccacttgctg gacagcatgg gatcgagggt
      301 gaagctgacg aagagcgaca cgagcacggc gaaagcgacg gtgacgccga actggaagaa
      361 gatcttgccg atgatcccgc ccatgaacgc cacggggatg aacacggcga cgacggcgaa
      421 cgaggtggac atgacggcga ggccgatctc gctcgttccc tctcgcgcgg cgtcgtcgtg
      481 gctctttccc atctccagat ggcgcacgat gttctcgcgc accacgatgg cgtcgtcgat
      541 caggaggccg atcgccagcg acagggcgag cagcgtcatg gtgttcacgg tgaagttgaa
      601 cacccacatg atgaagaagg cgctgatgat cgagatgggc agggtgagcc cggtgatcac
      661 cgtggagcgc cacgagttca ggaacaggta gatgatcatg atcgtgaggg ccgcgccgag
      721 cacgatcgag acctgcacgt cggcgagcga ctcgcgaatg cgccgcgagt cgtcgcggat
      781 gaccgtcatc tggatgtcct gcggaagctg acgctcgagc tccttgacca tcgccttcac
      841 ggcgtcggcg acttccacgg tgttggagcc ggagatcttg agcacttcca gcgacacggc
      901 cggcgtgctg ctggtgtcgc tgaagatctc ggcggcggtg cggcggtttt cggcgccgtc
      961 caccaccgtg gccacgtcgc tgatgcggac cggcgtgccc gaccgcacgg cgaccgggat
     1021 gtcggcgaac gacttcgggt ccacgatgcg tccggtcacg cgcacgagcc gctcggtcgc
     1081 gccgccttcg atgcggccgg ccggcacctc ctggttctcg cgctggagcg cggccgtgag
     1141 ctggcccggc gacaggccgt aggcgcgcat ggcggccggg tccacctgca cgcggatctg
     1201 gcgggcgttg cccccgatga tgttcacgcc gcccacgccg gggatcgact cgaggcgcgt
     1261 ggagacgacc tcgttggcga ggtcggtgat ctcgcggatc ggccgttcct tcgacgtgag
     1321 agcgatcgcc atgatcggcg aatcgttcgg gtcgaagtgc tggatgatcg ggtcctggat
     1381 gtccggcggc agcgtccggc gaatgcgcgc caccttggcc tggacgtcct gctgcgcgac
     1441 cgccacgtcc acgcccaggt tgaactggag ccggacgatc gaaaccccct cgagcgaggt
     1501 ggagctgatc tccttgatcc cctggacggt gttgagcgcc tcctcgatcg gcttcgagat
     1561 gtcgcgcatc atcacgtcgg gcgacgcgcc gggataggtc gtctgcgcga tgacgatcgg
     1621 gtacgtgatg tccgggtact cgtcgatcgc cagacggtcg tagctgatga tgccgagcac
     1681 gacgagcgcc accatcatca tggtggcgaa gacggggcgc ttgatggaga tgtcggagag
     1741 gaacatcgtg cgtacctgct gatgtgatgt cggggcgcga tgccccggcc gatgctatcg
     1801 ccggccggcc gtctcctggc ccgcgatggt cacctgcatg ccgcggccga gcgtgccgac
     1861 gttgccgacg atgacgcgct ccccggcctg cagccccgag gtgacctccg cgatgccgag
     1921 gcgctcgtcc accgcgccga gctgcacggg cgcgacgttg atcgtcttgc cgtcaacgcg
     1981 atacacgaac ggcttgccgt cctcggggga ctgtcgcagc gccgcggtgg ggacgccaag
     2041 gacgttgctc aacgtgcggc tcacgacgcg cccggtggcg aaggtgccac cgcggatcgt
     2101 accaccggga ttgggcacct gcacgtagac ggtgacggcg cgggtggccg gatcgatcgt
     2161 ggggttcacg cgggcgacac gcccatcgaa tcggcggccg tcggcgacga agtgcacgat
     2221 ttgaccggtg cgcagcgccg tggactggcg cgccggtacc gccgccgcga gctccagcgt
     2281 gccattgcgc acgatggtga acatggccgc gcccttggcg aggtgctcgc caggctccac
     2341 caggcgcttg ctgacgatgc cggacgaggg ggcgacgacg cgcgtatcac gcgcctggtt
     2401 gccggtggcg ctgaggcgcg cctcggccgc ggcgacgcgc gcccgcgcgg cgatcaccgc
     2461 ctgctgcgag ctcttgtagg cctgctgcgc gatcgcgccc gcctttaaca gctgctcgtt
     2521 ctgctcgagc gtccactcgg cgttggccag gtccgactgc gcggcgatgc ggtccgcctc
     2581 ggcgctcttg cggccgctct cctgctcgct cgcctcgaat c
//
LOCUS       DASSYW010000357         3519 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_559931, whole genome shotgun sequence.
ACCESSION   DASSYW010000357 DASSYW010000000
VERSION     DASSYW010000357.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3519)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3519)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3519
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_559931"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(57..1337)
                     /locus_tag="VFN38_05710"
     CDS             complement(57..1337)
                     /locus_tag="VFN38_05710"
                     /inference="COORDINATES: protein motif:HMM:NF018513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HET9011290.1"
                     /translation="MDAVILLGAFTVLCALGVPVAYALGLSALLGALWTDIPLEAVML
                     RISDGTDDFVLLAIPFFVLAGGIMAEGGMATRLINLARVFVGAIRGGLALVNVLASTL
                     FGCISGSSVADTASIGSVMIPQMAKAGFPRVFATNVTICGSVQALMIPPSHNAVIYSI
                     AAGGTVSVAHLFLAGIFPGLLFGLCLIGLVLWTSYRRGYPRGEPVEWKDVPRMVREAL
                     WGLGTVVIIMGGILSGVFTATESAAVACVYAFLVTFLVYRDYKWSELPRLVHRVVKTV
                     AMVMMLIGFSVAFGYLMALMQIPARMTQFFLGISDNKYVFLLLVNILLLVLGTFMDLA
                     PMLLICTPIFMPVILKLGIDPVHFGMIMILNLGIGLITPPVGPTLFVGCAIGKVTMEE
                     VSRELWPFYGAMCLALLLVTYVPAISLWLPGPMK"
     gene            complement(1340..1864)
                     /locus_tag="VFN38_05715"
     CDS             complement(1340..1864)
                     /locus_tag="VFN38_05715"
                     /inference="COORDINATES: protein motif:HMM:NF016200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HET9011291.1"
                     /translation="MNAKLRYQQAMEKLYLACIVVSGTALVVITLIIPLGVFMRYVVN
                     KPIGWPEPAAIILMIVFSFVGGAAVYRANVHIAVEALLNAVKPGLRQALKRGVTACMT
                     ATAAFMLFYGADLCWVVRGSTMAEFPSVSQGLVYLPIPVAGLLTLLFILEKVWVGEPP
                     PDSVMYRDQAAELE"
     gene            complement(1932..2927)
                     /locus_tag="VFN38_05720"
     CDS             complement(1932..2927)
                     /locus_tag="VFN38_05720"
                     /inference="COORDINATES: protein motif:HMM:NF015445.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HET9011292.1"
                     /translation="MHRSRRRFVGSAAAVAAGAALGPALPALAQEKVVWKASDVHPLG
                     YPTVEAIVRMGKKIEKETNGRISIQMYPQMQLGGEKEMIEQAQVGALQIARISVGAMG
                     PVVDELNVFNMPFVFRDETHMRHVIDGPIGVDLLDKVSNSSARLIALGWMDAGTRNVY
                     SNKPVTKPADLKGMKVRMMGNPIFVETMNAMGGTGVAMGFNELYSALQTGVVDGAENN
                     EPTVLAQNHYQVSKVYSLTGHLIIPEIFVFSKRTWEGLSPADQAMLRKFSKEAQLEQR
                     QLWDAYTNEAITKLKAAGVQFVPADKKAFYAATQPIRDKYGSKYAALIKQIEATA"
     gene            complement(3037..>3519)
                     /locus_tag="VFN38_05725"
     CDS             complement(3037..>3519)
                     /locus_tag="VFN38_05725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011293.1"
                     /translation="LKNPAVKLDEIYRTAEAHAKAWKPDVVPARITNTILGPLKADGS
                     SEAWTVSFFSPSSNAHVAVNTFRGGLNCWAQAGSAGRLPDLKPGFLLDGSRLYAIAKE
                     HGDAYLKDGYFVQIGTAAAPSNRHATWNLQFSKPDGKSAPILVVVDANTGKVEQVLRQ
                     "
BASE COUNT          608 a         1178 c         1182 g          551 t
ORIGIN      
        1 ctttcaaaag atcacgtctt ttcatttttc ctcccgctag agggactgcc actgtactac
       61 ttcatgggac ccggaagcca gagagaaatg gcgggaacgt aagtcaccag cagcagcgcg
      121 aggcacatgg cgccgtagaa cggccatagc tcccggctga cctcctccat cgtcaccttg
      181 ccgatcgcgc agccgacgaa cagcgtcggg cccaccggcg gcgtgatgag cccgatgccg
      241 aggttcagga tcatgatcat gccgaagtgc accgggtcga tcccgagctt caggatcacc
      301 ggcatgaaga tcggcgtgca gatcaggagc atcggcgcga ggtccatgaa cgtcccgagg
      361 acgagcagca ggatgttcac gagcagcagg aacacgtact tgttgtccga gatgccgagg
      421 aagaactgcg tcatccgcgc cgggatctgc atcagcgcca tcaggtagcc gaacgcgacc
      481 gagaacccga tcagcatcat caccatcgcg acggtcttca cgacgcgatg gacgaggcgc
      541 ggcagctcgc tccacttgta gtcgcggtac acgaggaacg tgacgaggaa cgcgtagacg
      601 cacgcgaccg ccgccgactc ggtcgcggtg aacacgcccg acaggatccc gcccatgatg
      661 atgacgacgg tgccgagccc ccagagcgcc tcgcgcacca tccgcggcac gtccttccac
      721 tcgaccggct cgccgcgcgg gtagccgcgg cgatacgagg tccacagcac gagtccgatc
      781 aggcacagcc cgaacagcag gccggggaag atgccggcga ggaacaggtg cgcgaccgac
      841 acggtgccgc cggccgcgat cgagtagatc acggcgttgt gcgacggcgg gatcatcagc
      901 gcctgcaccg acccgcagat cgtgacgttg gtcgcgaaca cgcgcgggaa gccggccttg
      961 gccatctgcg ggatcatcac cgacccgatc gacgccgtgt ccgcgaccga ggagcccgag
     1021 atgcagccga aaagcgtgct cgcgagcacg ttcaccagcg ccaggccgcc gcggatcgcg
     1081 ccgacgaaga cgcgcgcgag gttgatgagg cgggtcgcca tcccgccttc ggccatgatg
     1141 ccgccggcca gtacgaagaa cgggatcgcc agcagcacga agtcgtcggt gccgtcggag
     1201 atgcgcagca tcaccgcctc gagcgggatg tcggtccaca gcgcgccaag gagcgcggaa
     1261 agcccgagcg cgtaggcgac cggcacgccg agcgcgcaca gcaccgtgaa agccccgagg
     1321 aggatgacgg cgtccatggc tattcgagct ccgcggcctg gtcccggtac atcaccgaat
     1381 cgggcggcgg ctcgcccacc cacaccttct cgaggatgaa cagcagcgta agcagcccgg
     1441 caaccgggat cggcaggtag acgagcccct gcgacaccga cgggaactcc gccatcgtcg
     1501 agccgcgcac gacccagcac aggtcggcgc cgtagaacag catgaacgcc gcggtcgcgg
     1561 tcatgcacgc cgtcacgcct cgcttcagcg cctggcgcag ccccggcttc acggcgttca
     1621 gcagcgcctc gacggcgatg tggacgttcg cgcggtagac cgcggcgccg ccgacgaagc
     1681 tgaacacgat catcaggatg atcgccgcgg gctcgggcca gccgatcggc ttgttcacga
     1741 cgtagcgcat gaacacgccg agcggaatga tcaacgtgat gacgacgagc gcggtgcccg
     1801 agacgacgat gcaggcgagg tacagcttct ccatcgcctg ctggtagcgc agcttggcgt
     1861 tcacgacggc actccgggga agggtcggcg cgcggccggc gggcggccgc gcgcgttccc
     1921 ggggacgacg gtcaggcggt ggcttcgatc tgcttgatca gcgcggcgta cttgctgccg
     1981 tacttgtcgc ggatcggctg cgtggcggcg tagaaggcct tcttgtcggc cggcacgaac
     2041 tggacgccgg ccgccttgag cttggtgatc gcctcgttgg tgtacgcatc ccacagctgg
     2101 cgctgctcga gctgcgcctc cttcgagaac ttgcgcagca tcgcctggtc ggccggcgac
     2161 agcccttccc aggtccgctt cgagaacacg aagatctcgg ggatgatcag gtggccggtc
     2221 aggctgtaca ccttgctgac ctggtagtgg ttctgcgcga gcaccgtcgg ctcgttgttc
     2281 tcggcgccgt cgacgacgcc ggtctgcagc gcgctgtaca gctcgttgaa gcccatcgcg
     2341 acgccggtgc cgcccatcgc gttcatcgtc tcgacgaaga tcgggttgcc catcatccgg
     2401 accttcatgc ccttgaggtc ggcgggcttg gtcaccggct tgttcgagta gacgttgcgc
     2461 gtgccggcgt ccatccagcc gagcgcgatg agtcgcgcgc tcgagttcga caccttgtcg
     2521 agaaggtcga cgccgatcgg gccgtcgatg acgtgccgca tgtgcgtctc gtcgcggaac
     2581 acgaacggca tgttgaacac gttgagctcg tcgaccaccg ggcccatcgc gccgaccgag
     2641 atgcgcgcga tctgcagcgc gccgacctgc gcctgctcga tcatctcctt ctcgccgccg
     2701 agctgcatct gcgggtacat ctggatcgag atgcggccgt tggtctcctt ctcgatcttc
     2761 ttgcccatcc tgacgatcgc ctcgaccgtc ggatagccga gcgggtgcac gtcggaggcc
     2821 ttccagacca ccttctcctg cgcgagcgcc ggcaacgcgg ggcccagcgc ggcccccgcc
     2881 gcgacggcgg cggcggatcc tacgaatcga cgacggctgc gatgcatgac tcctcctggc
     2941 ttgggggtcc ggccggggcc gggaaacggg aagggctcgt ggcgcccctt ctggctgcga
     3001 agcgtaagac ctttccccga cgcgcggcaa ccgcgcctac tggcgcagca cctgctcgac
     3061 cttgccggtg ttcgcgtcga cgacgaccag gatcggcgcg gacttgccgt cgggcttgct
     3121 gaactgcagg ttccaggtgg cgtggcggtt cgacggcgcc gccgcggtgc cgatctgcac
     3181 gaagtatccg tccttcaggt aggcatcgcc gtgctccttc gcgatcgcgt agagccgcga
     3241 gccgtcgagc aggaagccgg gcttgaggtc gggcaggcgg ccggccgagc cggcctgcgc
     3301 ccagcagttg agcccgccgc ggaacgtgtt gaccgcgacg tgcgcgttgg acgacggcga
     3361 gaagaacgag accgtccacg cttcggacga gccgtcggcc ttcagcggcc ccaggatggt
     3421 gttggtgatg cgcgcgggca cgacgtcggg tttccacgct ttcgcgtgcg cctcggcggt
     3481 gcgatagatc tcgtcgagct tcaccgcggg gttcttcag
//
LOCUS       DASSYW010000358         2140 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_311129, whole genome shotgun sequence.
ACCESSION   DASSYW010000358 DASSYW010000000
VERSION     DASSYW010000358.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2140)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2140)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2140
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_311129"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..771)
                     /locus_tag="VFN38_05730"
     CDS             complement(<1..771)
                     /locus_tag="VFN38_05730"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: protein motif:HMM:NF014641.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004852 - uroporphyrinogen-III synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006780 - uroporphyrinogen III biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HET9011294.1"
                     /translation="MTQPSFDGLTVLVLESRRARELASIVESYGGRPLVAPSMREIPL
                     ESNTDALAFADAVLRQEFDLIILLTGVGTRALLDLVDRVRGQRDTFVEALGRIPIAAR
                     GPKPTAVLREIGLTPWLQAPEPNTWRELVGALDQRAGEMPLRARRVAVQEYGAPNPEL
                     LQALEERGALLTRVPIYQWALPEDLEPLRAACHALAAGSVDVVLLTTGTQVNHLFEVA
                     GQLGLADGVRAGLNGAVVASIGPTTSETLRQEGVSVHLE"
     gene            complement(841..2058)
                     /locus_tag="VFN38_05735"
     CDS             complement(841..2058)
                     /locus_tag="VFN38_05735"
                     /inference="COORDINATES: protein motif:HMM:TIGR00836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008519 - ammonium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0072488 - ammonium transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter"
                     /protein_id="HET9011295.1"
                     /translation="MNQADTAWMLISTALVLLMTPALAFFYGGLVRSKNALNTMMMSF
                     ISLGFVGALWALLGYSLAFTTGNDWIGDLSNAFLNGVGLEAKGTIPHALFMAFQATFC
                     IITAALISGAIVERMRFSAYVVFITLWSIVVYAPLAHWVWGAGFLADMGAWDFAGGTV
                     VHVNAASAALVAAIVLGKRQGYPSSSLLPHSVPLVLLGSGLLWFGWFGFNAGSALAAS
                     PIAGLAFVTTMLAPAGTLVVWTLLDWIRLGKSTAVGAATAIVVGLVAITPAAGFISPM
                     NGLILGAIAALPSYFALIIRAKTSLDDSLDVVAAHGVGGTVGALLTGVFAEKSLNGLF
                     DGAIAGNPGQVGIQAAAVVTALVYSGVVSFILLKVINLVIPIRADAPDEGTGLDLTQH
                     GEEAYLHEGGGQK"
BASE COUNT          379 a          752 c          723 g          286 t
ORIGIN      
        1 ctccagatgg accgaaaccc cctcctgccg gagcgtctcc gatgtcgtgg gaccgatcga
       61 agccaccacc gcgccgttca atccggcacg gacgccatcg gccaggccca gctggccggc
      121 cacctcgaag agatggttca cctgcgtgcc ggtggtcagc agcaccacat cgaccgatcc
      181 agccgccagc gcgtgacagg ccgcgcgcag cggctcgagg tcttcgggca gcgcccactg
      241 gtagatcggc acgcgcgtca gcagcgcgcc tcgctcctcg agcgcctgga gcagctcggg
      301 attgggcgcg ccgtactcct gcacggccac tctccgggcg cggagcggca tctcgccggc
      361 ccgctggtcg agcgccccca cgagctcgcg ccaggtgttc ggctcgggcg cctgcagcca
      421 cggcgtcagc ccgatctcgc gcaggaccgc cgtcggcttg gggccgcggg cggcgatggg
      481 gatgcggccg agcgcctcca cgaacgtgtc gcgctggccg cgcacgcggt ccacgaggtc
      541 gaggagcgcc cgggtaccga cgccggtgag caggatgatg aggtcgaact cctgccgcag
      601 caccgcgtcg gcaaaggcca gcgcgtcggt gttggattcg agggggattt cgcgcatcga
      661 cggcgccacg agcgggcggc cgccatagga ctcgacgatg gacgcgagct cacgcgcgcg
      721 ccggctctcg agcaccagca cggtgagacc gtcgaaactg ggttgcgtca cccgaaaatc
      781 ttatcagccg gcccgcggcc acgaccgcga accggctgac agaggtgacg ttggggaccc
      841 ctacttctgg ccgccgcctt cgtgcaggta ggcttcctcg ccgtgctgcg tcaggtcgag
      901 ccccgtgcct tcatcgggcg cgtcggcccg aatcgggatg acgaggttga tgaccttgag
      961 caggatgaag ctgacgacgc cgctgtaaac gagcgccgtc acgaccgccg ccgcctgaat
     1021 gcccacttgg cccggattgc cggcgatcgc gccgtcgaag agaccgttca gcgacttctc
     1081 ggcgaacaca cccgtgagga gtgcgcccac cgtcccgccc acgccgtgcg ccgcgaccac
     1141 gtcgagcgag tcgtcgagcg acgtcttggc gcggatgatc agcgcgaagt agctcggcaa
     1201 cgcggcaatc gcacccaaga tgaggccgtt catcgggctg atgaagccgg ccgccggcgt
     1261 gatggccacg aggcccacca cgatggccgt ggccgcgccc accgccgtcg acttgccgag
     1321 gcggatccag tcgaggaggg tccagacgac cagcgtcccg gccggcgcca gcatcgtcgt
     1381 tacgaaggcc aggccggcaa tcgggctggc ggccagggcg ctgccggcgt tgaacccgaa
     1441 ccacccgaac cagaggaggc ccgagccgag cagcaccagc ggcacgctgt gcggcagcag
     1501 cgacgacgac ggatacccct ggcgcttgcc gaggacgatg gccgccacca gcgccgccga
     1561 cgcggcgttc acgtgcacga ccgtgccgcc ggcgaagtcc cacgcgccca tgtcggccag
     1621 gaagccggcg ccccacaccc agtgcgccag cggggcgtag accacgatcg accagagcgt
     1681 gatgaacacc acgtaggcgc tgaagcgcat acgctcgacg atggcgcccg aaatcagcgc
     1741 cgccgtgatg atgcagaacg tggcctggaa ggccatgaag agcgcgtgtg gaatcgtgcc
     1801 cttggcctcg agccccaccc cgttcaggaa ggcgttcgag agatcgccga tccagtcgtt
     1861 accggtcgtg aaggccagcg agtatcccaa cagggcccag agcgcgccca cgaatccgag
     1921 cgagatgaaa ctcatcatca tggtgttgag cgcattcttc gagcgcacca gcccgccgta
     1981 gaagaatgcg agcgctgggg tcatcaacaa cacgagtgcc gtggatatca gcatccaggc
     2041 ggtatcagct tggttcattc gtcacctctg ttcgggatgt gagccactca cgcccggcgt
     2101 cccgcgggcg gcactcgccc cgggagcaaa acggacgcca
//
LOCUS       DASSYW010000359         2487 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1201847, whole genome shotgun sequence.
ACCESSION   DASSYW010000359 DASSYW010000000
VERSION     DASSYW010000359.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2487)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2487)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2487
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1201847"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..967
                     /locus_tag="VFN38_05740"
     CDS             <1..967
                     /locus_tag="VFN38_05740"
                     /inference="COORDINATES: protein motif:HMM:NF017743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011296.1"
                     /translation="LAAKGAIVGDALRRIGKRQVDAPVVEPSNAQWRYRRKLTLHLRR
                     LARGWIAGLHPYDDPVAVFDLRDCPITAEEVLAVWAELRPQFDLLPDERALRVAVRLT
                     EQGASVVVEGGRAWPNADRFFAAAPSMVELWWRPEEGRLRRIAARDDRSGAGASFVQV
                     NARVAAALRGHVLERVRSHAPARVVDAYAGMGDTAIPLSAEGLTVVAIELDGDAVASF
                     RDRLRAPSRAIVGRVEDHLPAALPADDVLLNPPRAGIDARVAAALERAGRPPRAILYV
                     SCDPATLARDVARMPRYRVASVRAYDMFPQTAHVETVCELVPEAA"
     gene            964..1464
                     /locus_tag="VFN38_05745"
     CDS             964..1464
                     /locus_tag="VFN38_05745"
                     /inference="COORDINATES: protein motif:HMM:NF012584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HET9011297.1"
                     /translation="MKYVVKVGDDDVEVSLDADVVEVDGVSAVAHVTELEGTPVRMVT
                     IGDEVHRVVTRRGPTRGRYTIWLDGFRYEVEALDERTRAIRELSAASAGPSGPAPLIA
                     PMPGMIVRVAVQVGDQVQAGQGLVVMEAMKMENELRATAAGTVKAVLALPGSAVEKGA
                     VLLELE"
     gene            1464..2354
                     /locus_tag="VFN38_05750"
     CDS             1464..2354
                     /locus_tag="VFN38_05750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011298.1"
                     /translation="MRPLIVALLVAASGTGLAAQSPNTDVFLAPLARRGDSLIVGAAE
                     NVTRRPGYDNQPSFLPDASAFLYTVIGADAQADTWRYDIKAGRSSRVTTTPESEYSPT
                     VIPGAPRFSVVRVERDSSQRLWSFALNGTDPQLVLADLLPVGYHAWLGPNRLVAYVLG
                     SPSTLHVIDRSGANDEVRARDIGRALQRIPGQGWYSFTRRDGERVMWIVSQPFEGGPV
                     APLVRAPADNEYHVWTPEGALLSASEGAIVRWNARTGDDGEWLPIATIPGVKNISRLA
                     VSPDGRWLAFVAEPVAPVAP"
BASE COUNT          320 a          868 c          947 g          352 t
ORIGIN      
        1 gctcgcggcc aagggagcca tcgtcggcga cgcgctgcgg cggatcggga agcgccaggt
       61 ggacgcgccg gtcgtggagc cgagcaacgc gcagtggcgc taccgccgca agctgacgct
      121 gcacctccgg cgcctcgcca ggggatggat cgccggcctg cacccgtacg acgaccccgt
      181 ggcggtgttc gacctgcgcg actgccccat caccgccgag gaggtgctgg cggtgtgggc
      241 cgagctgcgc ccgcagttcg acctgctgcc ggacgagcgg gcgctgcgcg tcgccgtgcg
      301 gctcaccgag cagggggcgt cggtggtggt ggagggggga cgcgcgtggc cgaatgccga
      361 ccggttcttc gccgcggcgc cgtcgatggt ggagctctgg tggcggccgg aggaggggcg
      421 cctccggcgg atcgctgcgc gcgacgaccg gtcgggcgcc ggcgcgtcgt tcgttcaggt
      481 gaacgcgcgc gtcgccgcgg cccttcgcgg gcacgtgctg gagcgggtcc gcagtcatgc
      541 ccccgcgcgc gtggtggacg cgtacgccgg gatgggcgac accgccatcc cgctctcggc
      601 ggaggggctc accgtcgtcg cgatcgagct ggatggcgac gcggtggcga gcttccgcga
      661 tcggctgcgg gctccgtcgc gggccatcgt cgggcgcgtg gaggatcacc tgcccgccgc
      721 gctccccgcc gacgacgtgc tgctcaaccc cccccgcgcc ggcatcgacg cccgcgtcgc
      781 cgcggcgctg gagcgggccg gccggccgcc gcgcgccatc ctctacgtga gctgcgaccc
      841 ggcgaccctg gcgcgggacg tggcccgcat gccccgttac cgggtggcgt ccgtccgcgc
      901 atacgacatg tttccccaga ccgcgcacgt cgagacggtg tgcgagctcg tgccggaggc
      961 cgcatgaagt acgtggtgaa ggtcggggac gacgacgtgg aggtgtcgct ggacgccgac
     1021 gtcgtcgagg tggacggcgt gtccgcagtg gcgcacgtga cggagctgga gggcacaccg
     1081 gtgcgcatgg tgacgatcgg cgacgaggtt caccgcgtcg tgacccgccg tggaccgact
     1141 cgtggccgct acacgatctg gctcgacggc ttccgctacg aggtggaggc gctggacgag
     1201 cgtacgcggg ccatccgcga gctgagcgcg gcgtcggccg gcccgtcggg cccggcgccg
     1261 ctcatcgccc cgatgccggg gatgatcgtg cgcgtcgccg tgcaggtggg cgaccaggtg
     1321 caggccggcc agggactcgt ggtcatggag gcaatgaaga tggagaacga gctgcgtgcg
     1381 accgcggccg gaacggtgaa ggccgtgctc gcactgccgg ggtcggcggt ggagaagggc
     1441 gccgtcctgc tggagctgga gtgatgcgcc ccctcatcgt cgcgctgctc gtcgccgcga
     1501 gcggcacggg cctcgccgcg cagagcccca ataccgacgt gtttctcgct ccgctggccc
     1561 ggcgcggtga ctcgctgatc gtgggcgcgg ccgagaacgt cacccgccgg ccgggctacg
     1621 acaatcagcc gagcttcctc ccggatgcga gcgcgttcct gtacacggtc atcggcgcgg
     1681 acgcgcaggc ggacacgtgg cgctacgaca tcaaggcggg ccgcagctcg cgcgtgacga
     1741 caacgccgga gagcgagtac tcgcccaccg tgattcccgg cgcgccgcga ttcagcgtcg
     1801 tgcgcgtcga gcgcgactcg tcccagcgcc tctggagctt cgcgctgaac ggcaccgacc
     1861 cgcagctcgt gctcgccgac ctgctgccgg tgggatatca cgcctggctc ggaccgaacc
     1921 gtctggtggc ctacgtgctg ggctccccct ccacgctcca cgtgatcgac cgcagcggcg
     1981 ccaacgacga ggtgcgcgcg cgcgacatcg gacgcgcgct gcagcggatc ccggggcagg
     2041 ggtggtacag cttcacgcgc cgcgacggcg agcgggtgat gtggatcgtg tcgcagccct
     2101 tcgaaggagg gccggtcgca ccgctcgttc gcgcgccggc cgacaacgaa taccacgtgt
     2161 ggacgcccga gggggcgctc ttgtccgcca gcgagggggc gatcgtgcgt tggaacgccc
     2221 gtaccggcga cgatggggag tggctcccca tcgcgacgat tcccggcgtg aagaacatca
     2281 gtcggctggc cgtcagcccc gacggccgct ggctcgcatt cgtggcggag ccggtcgccc
     2341 cagtcgcgcc gtaggtcggg accgccggca cgccgttgtc cgttggcgtg ctgacgatct
     2401 gcgacggcct gccagtgcgc cgtcctcgag ctcttactgg gcgccgagct ccatcccggc
     2461 cgatatcacc gatctgatgc cggtgcc
//
LOCUS       DASSYW010000360         4467 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_599384, whole genome shotgun sequence.
ACCESSION   DASSYW010000360 DASSYW010000000
VERSION     DASSYW010000360.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4467)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4467)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4467
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_599384"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1764
                     /locus_tag="VFN38_05755"
     CDS             <1..1764
                     /locus_tag="VFN38_05755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011299.1"
                     /translation="GQGQGSYGGSQSYGSSGGMGSPGYGGAGYSGSQGGQSAWGSSPG
                     SQAGYGSQGSMGSPGYGSQGGYGSSGYGSPGYGSQGYGSQGGSGSFGGSSMGGSGYGS
                     QAGMSGYGAPTGAPGYGSQGGYGQSGYGQSGYGQGGYGPGGYGSSQGYGSSGYGASQG
                     YGSPGGYGSQGGYGSSQQQGGYGSQGGYGPSQGGYGGGPMGYGAQGGMGSPGHGAQGH
                     GGSQGGVGSSQGGYGSSGGMGSQGGFGGGSMGSGAQGGHGPYGSSMGSQQGGMGAQQG
                     SYWAPGHGGGSGGGSYGPGGLSSQGGGSQGYGPQGGYGSGGEGWYSGQGSGQHGNYAS
                     GMGGSGGYGGGYGGSSGSGAGMGGYSSGGGTGWGSGQHQGSSSWASTGEVYDPDYHNW
                     RQEQLRALDDDYRNWRQERYRRFSDDFNQWRQGRQRGGSSIAGGETGSTTGGGSWGSS
                     TGGSGGSSFGGSAGTGSPGSSTGGYSSGSSLGGSSTGGSVGSSAGGGGTGTSGLGSGS
                     TGSSGSLGSGHSGSSGASLGASSPGSGSSPGGASITGSGGRMASQADDSSEGGASITG
                     GGSSGSSSSGSTSGRGSSSKK"
     gene            complement(1865..3340)
                     /locus_tag="VFN38_05760"
     CDS             complement(1865..3340)
                     /locus_tag="VFN38_05760"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: protein motif:HMM:NF009118.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001216 - DNA-binding transcription
                     activator activity [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase factor sigma-54"
                     /protein_id="HET9011300.1"
                     /translation="MNAPVLRNEQRQQQTLTPRLQQAVRLLQLSSLDFAQEVQQAMGN
                     NPFLEPDETEQDSAAPPATHDQDGPAADVSAEAPLTGTVTEVAAVEPPPDNSWEGEGE
                     GWSQYGNARKNNGSDHDFDMGDITAADESLRDHLRSQLQLLASSPRDRVLMTTIVEAL
                     DDDGYLRMNLEELKSLSGVDPLPDDDEMQIALKLVQSLEPAGVAARDMRECLLLQLRE
                     CSDPAKEGAHRVAQQIVVNYLDRLAMRDIGGIARSLGVSENAVEQAAECIRHCEPRPG
                     WRFGASNTRFVTPDVIVRKIRGNWTVTLNPTVVPRVRLNRMYAELFQSHRDARHSDLA
                     AQLQEARWTVRNVEQRFATILRVAQAIVRRQRHFLDYGELAMKPLGLREIADELGLHE
                     STVSRVTNNKYMATPAGVFELKYFFSRALATTSGGSCSATAIRGAIKDMIQSENPAEP
                     LSDAHIARLLARQGLQVARRTVTKYRQMMRVPAYEMRRRQA"
     gene            complement(3639..>4467)
                     /locus_tag="VFN38_05765"
     CDS             complement(3639..>4467)
                     /locus_tag="VFN38_05765"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: protein motif:HMM:NF012695.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003983 - UTP:glucose-1-phosphate
                     uridylyltransferase activity [Evidence IEA];
                     GO_process: GO:0009225 - nucleotide-sugar metabolic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase"
                     /protein_id="HET9011301.1"
                     /translation="AVDEAIAAGIDEMIFVTHRTKRAIEDHFDRAAELERELEKGGKE
                     SALAELRRVAPPHVRFSFARQTAPLGLGHAVWCARHLIGDEPFAVMLPDDLLDGEPPV
                     LAQMVETFQRSGASVIAVENVQREDTSRYGIVEPALDSTSRLTRILGIVEKPQPEKAP
                     STMGVVGRYVFSPRLLDCLENLEPGSGNEIQLTDGIARLLAQEPVFAYNYIGKRYDCG
                     SKLGFLEATVDFALKHPQLGAEFQQLVNRVADASLHDTAAAGGQGTRGPRHLTLVSS"
BASE COUNT          636 a         1429 c         1673 g          729 t
ORIGIN      
        1 ggtcaaggcc agggcagcta cggtggttcg cagagctacg gctcgtcggg cggcatgggc
       61 tccccgggct acggcggagc ggggtacagc ggctcgcagg gcgggcagag cgcgtggggc
      121 tcttcccctg ggtcgcaagc tggctacggt tcgcagggaa gcatgggctc gccgggctat
      181 gggtcccagg gtggctatgg ctcatcgggg tacggctcgc cgggttatgg ctcgcaaggt
      241 tatggatcgc agggcggcag tggctcgttc ggcggcagct cgatgggcgg tagcggctat
      301 ggctcgcagg caggcatgag cggctacggc gctccgacgg gcgcccccgg ctacggctcg
      361 caaggtggct acggccagag cgggtacggc cagagcgggt acgggcaggg tggatacggg
      421 ccgggcggct atggctcctc gcagggctac ggctcgtccg gttacggcgc ttcccagggc
      481 tacggctcgc caggcggcta cggctcacaa ggcggctacg gctcctctca gcagcaaggc
      541 ggctatggat ctcagggtgg ttacggcccg tcgcagggcg ggtacggcgg cggcccgatg
      601 ggctacggcg cgcaaggcgg catgggctcg ccaggccatg gcgcgcaggg ccatggcggt
      661 tcgcaaggcg gcgtgggctc atcacagggc ggctacggct cgtccggtgg catgggttcg
      721 caaggcggct tcggcggcgg ttccatgggc tccggcgcgc aaggcggcca tggcccttac
      781 ggttccagca tggggtcgca gcagggtggc atgggcgcgc agcaagggag ctactgggcg
      841 ccgggccacg gcggtggttc cggcggtggt tcgtatggtc ccggtggact gagttcgcaa
      901 ggaggcggct ctcaaggcta cggcccgcaa ggcggttacg gctccggcgg cgaaggctgg
      961 tacagcggac agggcagcgg ccagcacggc aactacgcca gcggcatggg gggcagtggt
     1021 ggctatggtg gcggctacgg cggatcgtcg ggcagcggcg ccggcatggg cggctactcc
     1081 agcggtggcg gcacgggctg gggcagcggt cagcaccagg gcagctcgag ctgggccagc
     1141 accggtgagg tgtacgaccc cgactaccac aactggcgtc aggaacagct gcgcgcgctg
     1201 gacgacgact atcgcaactg gcgccaggag cgctaccgca ggttctcgga cgacttcaac
     1261 cagtggcgac agggccgtca gcgcggcggt tcctcgatcg ccggcggtga gaccggatcg
     1321 acaacgggcg gtggctcctg gggttcgtcg accggtggtt ccggcggttc gtccttcggt
     1381 ggctccgcag gcaccggctc gccgggttcg tcgacgggcg ggtactcgtc cggatcgtcc
     1441 ctgggcggtt cctcgaccgg cggctcggtc ggttcgtcag cgggcggagg gggaaccggt
     1501 acatcgggcc tgggtagcgg gagcacgggt tcctccggtt cgctgggctc gggtcacagt
     1561 ggttcgtcgg gcgcgagcct cggcgcgtcg agtcccggga gcggcagctc gcccggcggt
     1621 gcgtcgatca ccggcagcgg cggccgcatg gcgagccagg ccgacgacag ctccgaaggc
     1681 ggcgcgtcga tcaccggcgg cggcagctcc ggctcgtcca gcagcggatc cacgtcggga
     1741 cgcggcagtt cgtcgaagaa gtgaactgcc gaggtcgtgc cgcgcgagcg gccagcgaaa
     1801 gaaacggcgg acctcgcgtc cgccgttttc attcgcggcg actgaacaac caagccccgg
     1861 gaattcaggc ctgccgacgc cgcatctcgt acgcgggcac gcgcatcatc tgccggtact
     1921 tggtgacggt gcgccgcgcg acctgcagtc cctggcgcgc gagcagccgc gcgatgtgcg
     1981 cgtcggacag cggctcggcg gggttctccg actggatcat gtccttgatc gcgccgcgga
     2041 tcgcggtggc cgaacacgag ccgccgctgg tggtcgccag cgcgcgcgag aagaagtact
     2101 tcagctcgaa taccccggcg ggcgtggcca tgtacttgtt gttcgtcacg cgcgacacgg
     2161 tcgactcgtg caggccgagc tcgtcggcga tctcgcgcag tccgagcggc ttcatcgcga
     2221 gttcgccgta gtcgaggaag tggcgctgac ggcgaacgat cgcctgcgcc acgcgcagga
     2281 tggtcgcgaa gcgctgctcg acgttgcgca ccgtccagcg cgcttcctgc agctgcgctg
     2341 caaggtccga gtggcgcgcg tcgcggtggc tctggaacag ctccgcgtac atgcggttca
     2401 ggcgcacgcg cggcacgacg gtcggattca gcgtcacggt ccagtttccg cggatcttgc
     2461 gcacgatcac gtcgggcgtc acgaatcgcg tgttcgacgc gccgaagcgc cagccgggac
     2521 gcggctcgca gtgccggatg cactcggcgg cctgctcgac ggcgttctcc gacacgccga
     2581 gcgagcgcgc gataccgccg atgtcgcgca tcgccaggcg atcgaggtag ttgacgacga
     2641 tctgctgcgc gacgcgatgc gcgccttcct tcgccgggtc gctgcactcg cgcagttgca
     2701 gcagcaggca ctcccgcatg tcgcgcgcgg ccacgccggc gggctcgaga gactgcacga
     2761 gtttcagcgc gatctgcatc tcgtcgtcgt ccggcagcgg gtcgactccc gacagcgact
     2821 tcaattcctc gaggttcatg cggaggtagc cgtcgtcgtc gagcgcctcg acgatcgtcg
     2881 tcatcaggac gcgatcgcgc ggggacgagg ccagcagctg cagctgcgaa cgcaggtgat
     2941 cgcgcagcga ctcgtcggcg gcggtgatgt cgcccatgtc gaagtcgtgg tcggagccgt
     3001 tgttcttgcg tgcattgccg tactgcgacc agccttcgcc ctccccctcc cagctgttgt
     3061 cgggcggcgg ttcgacggcc gcgacttcgg tgaccgttcc ggtcagcggc gcttcggccg
     3121 agacgtcggc cgcgggcccg tcctggtcgt gagtggccgg cggcgcggcg gaatcctgct
     3181 cggtctcgtc cggttccagg aaggggttgt tacccatcgc ctgctgcacc tcctgcgcga
     3241 aatcgaggga ggacagctgc agcaggcgaa ccgcctgctg caggcgaggc gtcagcgtct
     3301 gctgctgacg ttgttcattc cggagcacgg gagcgttcat cgggtttcct tcgcttggtt
     3361 cgactttgtg atcgccggac ggagccgacg acgaacaatg agcggcccga tcggaagacc
     3421 ggggcggagc gacccgaggc gacagcgagc ggagcctgtg tagtcggctc ttcgatcgcg
     3481 tcgtttcttg ttgcgatttc ctgcgggcat acgacttgaa gcaaggaccg tgccgctgcg
     3541 tgcctgtcgt gtgcccacgg cgtgcccacg tcgtgcccag agagcggtgc gactgaaata
     3601 gtcactcgcg cggcggaccg cgtggaactt ctaccgcatc aactggaaac gagcgtcagg
     3661 tggcgcggac cgcgcgtgcc ctgaccgccc gcggctgccg tgtcgtgcag gctcgcgtcg
     3721 gcgacgcgat tgacgagctg ctggaactcg gcgccgagct gcggatgctt cagcgcgaag
     3781 tcgaccgtgg cttcgagaaa accgagcttg ctgccgcagt cgtaacgctt gccgatgtag
     3841 ttgtatgcga acaccggctc ctgcgcgagc aggcgcgcga tgccgtcggt gagctggatc
     3901 tcgttgccgg agccgggctc gaggttctcg aggcagtcga gcagtcgcgg cgagaacacg
     3961 tagcggccca ccacgcccat ggtcgacggc gccttctcgg gctgtggttt ctcgacgatg
     4021 cccaggatgc gcgtcaggcg cgacgtgctg tcgagcgcgg gttccacgat gccgtagcgc
     4081 gacgtgtctt cgcgctgcac gttctcaacg gcgatcaccg acgcgccgga gcgctggaac
     4141 gtctcgacca tctgcgcgag caccggcggt tcgccgtcga gcaggtcgtc cggcagcatc
     4201 accgcgaagg gctcgtcgcc gatcaggtgg cgtgcgcacc acaccgcgtg accgagcccg
     4261 agcggggccg tctggcgggc gaagctgaag cgcacgtggg gcggcgcgac gcgccgcagc
     4321 tcggcaagcg cgctctcctt gccgcccttc tccagttcgc gctcgagttc ggccgcgcgg
     4381 tcgaagtggt cctcgatcgc gcgcttggtc cgatgcgtga cgaagatcat ctcgtcgata
     4441 ccggccgcga tggcttcgtc gacggcg
//
LOCUS       DASSYW010000361         2040 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_944066, whole genome shotgun sequence.
ACCESSION   DASSYW010000361 DASSYW010000000
VERSION     DASSYW010000361.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2040)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2040)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2040
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_944066"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..970)
                     /locus_tag="VFN38_05770"
     CDS             complement(<1..970)
                     /locus_tag="VFN38_05770"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase family protein"
                     /protein_id="HET9011302.1"
                     /translation="MPDPVYLDHAATTPVRAEVLEAMLPFFGARFGNPSSAHRWGREA
                     RTALDEARERLASCLGAANDEVVFTSCGTEADNMAVIGVWRARRTDARRAVVTTPIEH
                     KAVLAAAHEVAKEGGEERFLAMERSGRVDARSFDALVTDDVAVCSVMWVNNEIGSLQD
                     VPALAARAKARGVTFHTDAVQAFGKVEVDARTTPFDLLSISGHKIGAPKGIGALYIRR
                     GTPLEPLMFGGSQDRGRRPGTENVAMAVGLARAAELAVAEREHEWAKLEAMRDRLESA
                     LLTRIPDAVIHGRGGSRAPHICNVSVPGVDSESMLMALDLRGVGCSA"
     gene            1078..1689
                     /locus_tag="VFN38_05775"
     CDS             1078..1689
                     /locus_tag="VFN38_05775"
                     /inference="COORDINATES: protein motif:HMM:NF019656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1707 domain-containing protein"
                     /protein_id="HET9011303.1"
                     /translation="MPDFDTPRSLPIASGTDSPLHDARERAVRLLTDGFAYDIITVEE
                     FEWRLGQMSRAESPQEIDALVADLATPPAASSPSLYSGVPMPAPTEGRILGIMSETRR
                     TGPWRVPQRLRVKGIMSEVKIDLRYAVVPPGCAIDVSAIMANVQFIVPPGMIVDFDVG
                     AVMASARNDPRAAGLDVYTVPHIRIRGSAVMAEVRVKVRDVGR"
     gene            complement(1691..>2040)
                     /locus_tag="VFN38_05780"
     CDS             complement(1691..>2040)
                     /locus_tag="VFN38_05780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011304.1"
                     /translation="DADDERLMGCERLLLRTDRTIAEGTFPDAWPVLSAASAILLAAS
                     GVKLVGVDAPSVDERESKTLEVHRALFSAGAYVLENLDLRGVAEGRYDLVALPQRLGG
                     LDAAPVRAVLRPA"
BASE COUNT          305 a          773 c          678 g          284 t
ORIGIN      
        1 ccgcggagca ccccacaccg cgcaggtcca gcgccatgag catcgactcg ctgtccacgc
       61 cgggcaccga cacgttgcag atgtggggcg cgcgcgaacc gccgcgacca tggatcacgg
      121 cgtcggggat gcgcgtcagc agcgccgatt cgagccggtc gcgcatcgcc tccagcttgg
      181 cccactcgtg ctcgcgctcc gccaccgcga gctccgcggc acgcgccagt cccaccgcca
      241 tcgccacgtt ctcggtgccc gggcgtcggc cgcggtcctg cgagccgccg aacatcagcg
      301 gctccaacgg cgtgccgcgc cgaatgtaca gcgccccgat ccccttgggg gctccgatct
      361 tgtgcccgga gatggaaagc aggtcgaacg gcgtcgtgcg cgcgtcgacc tccaccttcc
      421 cgaacgcctg cacggcatcg gtgtggaagg tcacgccgcg cgccttcgcc cgcgccgcga
      481 gggcggggac gtcctgcagc gagccgatct cgttgttcac ccacatcacc gagcatacgg
      541 cgacgtcgtc cgtcacgagc gcgtcgaacg agcgagcatc cacccgtccg ctgcgctcca
      601 tggcgaggaa ccgctcttcg cccccttcct tcgccacctc gtgcgccgcg gcgagcaccg
      661 ccttgtgctc gatcggcgtg gtcacgaccg ctcggcgcgc atcggtgcgc cgagcccgcc
      721 atacgccgat cacggccatg ttgtccgcct cggtgccgca cgacgtgaac accacctcgt
      781 cgttggcggc gcccaggcag ctggccagcc gctccctcgc ctcgtccagc gccgtgcgcg
      841 cctcgcgccc ccagcggtgc gcgctcgagg gattgccgaa gcgcgccccg aagaagggaa
      901 gcatcgcctc cagcacctcc gcgcgaaccg gggtcgtggc ggcgtgatcg aggtagacgg
      961 ggtcaggcat gatgtccaaa gttaatggtt cgagcgcacc cgagaaaccg ccggacgggg
     1021 cctgtcgacc tggcaatgag cctgacactc tcccggccag aaatccgtat cacccccatg
     1081 cccgacttcg acactccccg cagcctgccg atcgcctccg gcacggactc gccgctccac
     1141 gacgcccgtg agcgtgcggt ccggctgctc accgacggct tcgcctacga catcatcacg
     1201 gtggaggagt tcgagtggcg gctcgggcag atgagccgtg ccgagagccc gcaggagatc
     1261 gacgccctcg tcgccgatct ggcaacgccg cctgccgcgt cctcgccgag cctctactcc
     1321 ggcgtgccca tgccggcgcc cacggagggg cgcatcctgg gcatcatgag cgaaacgcgt
     1381 cgcaccggcc cgtggcgcgt cccgcagcgc ctgcgcgtca agggcatcat gagcgaggtc
     1441 aagatcgacc tgcgctacgc ggtggtgcct ccgggctgcg ccatcgacgt ctcggcgatc
     1501 atggccaacg tccagttcat cgtgccgccg ggaatgatcg tcgacttcga cgtgggcgcg
     1561 gtcatggcgt cggcgcggaa cgacccacgc gcggcgggac tggacgtcta cacggtgccg
     1621 cacatccgga tccgcggctc cgcggtcatg gcggaggtgc gcgtgaaggt gcgggacgtg
     1681 gggcgctagg tcaggcgggg cgcagcaccg cgcgcacggg cgccgcgtcg agccccccga
     1741 gccgctgcgg cagcgccacg agatcgtagc ggccctcggc cactccgcgc aggtcgagat
     1801 tctccagcac gtaggcgccg gcggagaaca gggcgcggtg cacctcgagc gtcttgctct
     1861 cgcgctcgtc caccgacggt gcatccacgc cgacgagctt cacccccgac gcggcgagca
     1921 gaatcgccga cgccgcggag agcaccggcc acgcgtccgg gaaggtgccc tcggcgatcg
     1981 tgcgatcggt gcgcagcagc aggcgctcac accccatcaa tcgctcgtcg tcggcgtcga
//
LOCUS       DASSYW010000362         2065 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1376654, whole genome shotgun sequence.
ACCESSION   DASSYW010000362 DASSYW010000000
VERSION     DASSYW010000362.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2065)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2065)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2065
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1376654"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(2..1003)
                     /gene="pilM"
                     /locus_tag="VFN38_05785"
     CDS             complement(2..1003)
                     /gene="pilM"
                     /locus_tag="VFN38_05785"
                     /inference="COORDINATES: protein motif:HMM:NF022554.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilM"
                     /protein_id="HET9011305.1"
                     /translation="MSADVLERVRSGRTSLLATAPPSVAIEIAQSHVTVVAVDGAGRD
                     AVISGYAVEPLATGVVTPALNATNVHDAAALVATIKSALHKVAGRTRRVALVVPDTTA
                     KISLIRFEKIPAKYQDLDQLIRWQLRKTAPFRIEDAQVSWIRGIDLDGGGREFVVAMA
                     RRDVVEGFERACDEAGVHAGVVDTATFSLINAQLAAGGATAGDWLLVHIASDYVTLAV
                     VRGPHLVFFRNRTIGAEADLADMVHQTAMYHEDRLGGGGFSRVVLAGASLAGADQAER
                     LKRGIEERVGGRVAMIDVRDGAAMRDRIGASASLLDTLAAPVGVLLRERPAAKGRVA"
     gene            complement(1000..>2065)
                     /locus_tag="VFN38_05790"
     CDS             complement(1000..>2065)
                     /locus_tag="VFN38_05790"
                     /inference="COORDINATES: protein motif:HMM:NF012652.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="GspE/PulE family protein"
                     /protein_id="HET9011306.1"
                     /translation="GVLQPAMRPIDRRFHSTIISRVKVMAELDIAEKRVPQDGRFKLR
                     MPGKTIDFRVSIMPSVHGEDAVIRILDKESISEQFHELRLDILGFPADELKRFRKYIA
                     EPYGMVLVTGPTGSGKTTTLYAALSEIKSIEDKIITIEDPVESQLRGITQIPINEKKG
                     LTFARGLRSILRHDPDKIMVGEIRDPETAQIAIQSALTGHLVFTTVHANNVLDVLGRF
                     LNMGVEPYQFVSALNCVLAQRLVRNICAHCKRKATVTRAMLEESGMDPALEHSGLFFE
                     GAGCIECGGTGFKGRHAICELLDLSDNIREMILARRPSSEIKKAAREEGMRFLRESAV
                     ERVLNGSTTLREINKVTFVE"
BASE COUNT          312 a          719 c          702 g          332 t
ORIGIN      
        1 atcaggcgac ccgccccttc gcggccggcc gttcgcgcag cagcacgccg accggcgccg
       61 ccagggtgtc cagcagactc gcgctcgcgc cgatccgatc gcgcatcgcc gcgccgtcgc
      121 gcacgtcaat catcgcgacg cggccgccga cgcgctcctc gatcccgcgc ttcaggcgtt
      181 cggcctggtc ggcccccgcg agcgacgcgc cggcgagcac gacgcgtgag aacccgccgc
      241 cgccgagccg atcctcgtgg tacatcgcgg tctgatgcac catgtcggcg aggtccgcct
      301 cggcgccgat cgtgcggttg cgaaagaaca ccaggtgcgg gccgcggacg acggcgaggg
      361 tcacgtaatc gctggcgatg tggacgagga gccagtcgcc ggcggtggcg ccgccggccg
      421 cgagctgcgc gttgatcagg ctgaaggtcg ccgtgtcgac gaccccggca tgcacgccgg
      481 cctcgtcgca ggcccgctcg aagccctcga cgacgtcgcg ccgtgccatc gccaccacga
      541 actcgcggcc gccgccgtcg agatcgatgc cgcggatcca cgacacctgc gcgtcctcga
      601 tccggaacgg cgcggtcttg cgcagctgcc agcgaatcag ctggtcgaga tcctggtact
      661 tcgccgggat cttctcgaag cggatcagcg agatcttcgc ggtcgtgtcg ggcacgacca
      721 gggccacgcg ccgcgtgcgc ccggcgacct tgtgcagcgc cgacttgatc gtcgcgacga
      781 gcgccgccgc gtcgtgcacg ttcgtcgcgt tgagcgccgg ggtgacgacg ccggtggcca
      841 gcggctcgac ggcatagccg gagatcacgg catcgcgccc ggcgccgtcg acggcgacga
      901 cggtgacgtg cgactgcgcg atctcgatcg cgaccgacgg cggcgcggtc gcgagcaggc
      961 tcgtgcggcc cgagcggacg cgttccagaa cgtctgcact cattcgacga acgtcacctt
     1021 gttgatttcg cgcaacgtgg tggagccgtt gagcacgcgc tcgacggccg actcgcgcag
     1081 gaagcgcatc ccctcctcgc gcgccgcctt cttgatctcc gagctcggac gccgcgccag
     1141 gatcatctcg cggatgttgt cggagagatc cagcagctcg cagatcgcgt gccgcccctt
     1201 gaagccggtg ccgccgcact cgatgcagcc ggcgccttca aaaaacagcc cgctgtgctc
     1261 gagcgccgga tccatgcccg attcctcgag catcgcccgc gtcacggtcg ccttccgctt
     1321 gcagtgcgcg cagatgttac gcaccaggcg ctgcgccagc acgcagttga gcgccgacac
     1381 gaactgatac ggctcgacgc ccatgttgag gaaccggccg aggacgtcga gcacgttgtt
     1441 ggcatgcacg gtggtgaaga cgaggtggcc ggtcagcgcc gactgaatcg cgatctgcgc
     1501 cgtctccggg tcgcggatct cgccgaccat gatcttgtcc ggatcgtggc gcaggatcga
     1561 gcgcaggccg cgcgcgaacg tcagcccctt cttctcgttg atcggaatct gggtgatgcc
     1621 gcgcagctga gactcgaccg ggtcctcgat cgtgatgatc ttgtcctcga tcgacttgat
     1681 ctcggacagc gccgcataga gcgtcgtcgt cttgccgctg ccggtcggac cggtgacgag
     1741 gaccatgccg tacggctcgg cgatgtactt gcggaagcgc ttgagctcgt cggcgggaaa
     1801 gccgaggata tccaggcgca gctcgtggaa ctgctcgctg atcgactcct tgtcgaggat
     1861 gcggatgacc gcgtcctcgc cgtggacgct cggcatgatc gaaacgcgga agtcgatcgt
     1921 cttgcccggc atccgcagct tgaagcggcc gtcctgcggc acgcgcttct cggcgatgtc
     1981 gagctcggcc atgaccttca cgcgcgagat gatggtgctg tggaagcggc ggtcgatcgg
     2041 ccgcatcgcc ggctgcagga cgccg
//
LOCUS       DASSYW010000363         3250 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_233816, whole genome shotgun sequence.
ACCESSION   DASSYW010000363 DASSYW010000000
VERSION     DASSYW010000363.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3250)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3250)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3250
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_233816"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..766)
                     /locus_tag="VFN38_05795"
     CDS             complement(<1..766)
                     /locus_tag="VFN38_05795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacetone oxidase family FAD-binding enzyme"
                     /protein_id="HET9011307.1"
                     /translation="MSRRIAVIGAGAAGTMAAIFAARSGAATVLLERTRDGGRKILIS
                     GGGRCNVLPARLDESRFVTDSSPNTLRKIVRGWPLAEQIAFFERDLGIPLVEETESLK
                     LFPASHRARDVRDGLLAHAARLGVAVHMDTMVTDLAPTATGWRISRGAAEPLDVDAVI
                     VATGGLSVPNTGSDGTGLRIIERLGHTMHPTYAALTPLTADPAPFGILSGVSLPVTLT
                     ARSATRTATATGGFLFTHHGYSGPSVLDVSHVVVRSR"
     gene            890..1234
                     /locus_tag="VFN38_05800"
     CDS             890..1234
                     /locus_tag="VFN38_05800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011308.1"
                     /translation="MRRRWGFRGWAMVWAVLQFALPAVAAYADARLERESATAQGPHV
                     EPRSDAACRPPHSAECALCQLVSRASAPAAHDAGCPVILRLVEQPAVAERPWRAHAGP
                     ARLALARAPPQG"
     gene            1357..2679
                     /locus_tag="VFN38_05805"
     CDS             1357..2679
                     /locus_tag="VFN38_05805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011309.1"
                     /translation="MRTTRFLVAALLLAAPAAGAQQPDSAARARARADSVAKAVRDSI
                     ALMKELGAAVADTTGRPGTPAAPQGGPTNPRLLPDISAVGDFVADLSPEGSTQEGGAR
                     LGVREVELAVQAVVDPYFRGDIFLGLNDLEGIAIEQAYLTTTSLPNQIEARLGRFLMP
                     FGKQNLTHRHDLHTVEYPYVIQRLLGAEGLKGTGVYGSRVFSPFGFYQELQVTAVDHL
                     SDPVDSLVTGEPVNKSLAGLGFSARVRNYVDLTEAQNVELSFSAMTGRRAQPIRMAYR
                     SLYGDVTGMAARQSTLGADVTYRWRPLQQGIYQSFILQGEVMRQLNERNPTVPAPQCD
                     PVLSTPCPTPADAYAGPTRDYSGAYLFARYQTGQRSFLGARYDWLQDAERDGRTLNAG
                     SVYLEWFPSEFSKLMAGYEAAKPQDATLLHRLLLQATFALGPHKPHPF"
     gene            2711..>3250
                     /locus_tag="VFN38_05810"
     CDS             2711..>3250
                     /locus_tag="VFN38_05810"
                     /inference="COORDINATES: protein motif:HMM:NF013465.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter substrate-binding protein"
                     /protein_id="HET9011310.1"
                     /translation="MIRRIAYVLLPVLLALAPRAAQAQLKVVTSTTDLYDIAKAVGGN
                     RITATHIGEGYQDPHFIEAKPSFVLQLRNADVWAFVGLDLEIGWMPLLLDGARNPKIR
                     PGGSGYLDASAAVPVLDRPQGNLDRSMGDVHPLGNPHYWLDPENGRRIARLFEAKFAQ
                     LDPANAAVYDRNERAFEERL"
BASE COUNT          459 a         1187 c         1164 g          440 t
ORIGIN      
        1 cacgcgaccg caccacgacg tgagacacgt cgagcacgga cggcccgctg tagccgtggt
       61 gggtgaacag gaagccgccg gtggcggtgg ccgtgcgggt ggcggagcgc gcggtgagcg
      121 tcaccggcag cgacacgccg gacaggatgc cgaagggcgc cggatccgcg gtgagcgggg
      181 tgagcgccgc gtaggtggga tgcatcgtgt gcccgagtcg ctcgatgatc cgcaggccgg
      241 tgccgtcgct tcccgtgttc ggcacgctca gccctcccgt cgccacgatg acggcgtcca
      301 cgtcgagcgg ctccgccgcg ccgcggctga tgcgccatcc ggtggcggtg ggcgcgaggt
      361 cggtgaccat ggtgtccatg tgcaccgcga cgcccagccg cgcggcgtgg gcgagcaggc
      421 cgtcgcgcac gtcgcgggcg cggtgcgagg ccggaaacag cttgagcgat tcggtctcct
      481 cgacgagcgg gatcccgagg tcgcgctcga agaacgcgat ctgctcggcg agcggccacc
      541 cgcgcacgat cttgcgcagg gtgttgggcg aggagtcggt gacgaagcgc gactcgtcca
      601 ggcgggcggg gagcacgttg caccgcccgc cgccgctgat caggatcttg cggccgccgt
      661 cgcgcgtgcg ctccagcagc accgtggccg cccccgaccg ggcggcgaag atcgcggcca
      721 tcgtgccggc ggcaccggcg ccgatcacgg cgatgcggcg gctcaccgac gggggagctg
      781 gggggaggga acgcgcgcag gccgcatgcg gcatggtagc gcggaggccg gccgcgcgcc
      841 acgcgcgggg cgcgtttgct ccgcgtcgcg ccccctccta ccttgtgtca tgcgtcggcg
      901 ctggggattc cgcggctggg cgatggtgtg ggcggtgctg cagttcgcgc tgccggcggt
      961 ggcggcgtat gccgatgccc gcctcgagcg cgagtccgcc accgcgcagg gaccgcacgt
     1021 ggagccgcgg tccgacgcag cgtgccggcc cccccattcc gcggaatgcg cgctctgcca
     1081 gctcgtctcc cgagcctcgg ccccggccgc ccacgacgcc ggctgtccgg tgatcctgcg
     1141 gctcgtggag cagccggcgg tggccgagcg gccgtggcgc gcgcacgccg ggcccgcccg
     1201 gctcgccctc gcgcgagcgc cgccgcaggg ctgagcggac gacggcggct gggcggctcg
     1261 cccgatcgcc acgaatccga acgttcgccg tgccgcgcgt ccactcccgt ccgggaggcc
     1321 gcgacgccgc acgaccatca gccccgaacg acattcatgc gcaccacacg attcctcgtg
     1381 gctgccctgc tgctcgccgc gcccgcggcg ggcgcacagc agcccgactc ggccgcgcgg
     1441 gcacgggcca gggccgactc ggttgcgaag gccgtacgcg actccatcgc cctgatgaag
     1501 gagctgggcg ccgcggtggc cgacaccacg ggccggccgg gtacgcccgc cgcgccccag
     1561 gggggcccca ccaatccccg cctgctcccc gacatcagcg ccgtcggaga cttcgtcgcc
     1621 gacctgtcgc ccgagggcag cacccaggag ggcggcgcac ggctcggggt gcgcgaggtg
     1681 gagctcgccg tgcaggccgt cgtcgatccg tacttcaggg gcgacatctt cctcggcctc
     1741 aacgacctgg aagggatcgc gatcgagcag gcctatctca ccacgacgtc gctccccaac
     1801 cagatcgagg cgcggctcgg gcggttcctc atgccgttcg gcaagcagaa cctcacccac
     1861 cgccacgacc tgcacaccgt cgagtatccg tacgtcatcc agcgcctgct cggcgccgag
     1921 gggctgaagg gaaccggcgt gtacggcagc cgcgtcttct cccccttcgg cttctaccag
     1981 gagctgcagg tgacggcggt ggaccacctg agcgaccccg tggacagcct cgtcaccggg
     2041 gagccggtga acaagtcgct cgccggtctc gggttctcgg cgcgggtccg caactacgta
     2101 gacctgaccg aggcgcagaa cgtggagctg tcgttctcgg cgatgaccgg ccggcgcgcc
     2161 cagccgatcc ggatggcgta tcgctcgctc tacggcgacg tcaccggcat ggccgcacgg
     2221 cagtcgacgc tcggcgcgga cgtcacgtat cggtggcgcc cgctgcagca ggggatctac
     2281 cagtcgttca tcctgcaggg cgaggtgatg cggcagctga acgagcgcaa tcccaccgtg
     2341 cccgcgccgc agtgcgaccc ggtgctgtcc accccctgtc ccactcccgc ggacgcctac
     2401 gcgggtccaa cgcgcgacta cagcggcgcg tacctgttcg cgcgctacca gacgggccag
     2461 cggtcgtttc tcggcgcccg ctacgactgg ctgcaggacg ccgagcgcga cggccggacc
     2521 ctgaatgcgg gctcagtgta cctcgaatgg ttcccgagcg agttctcgaa gctgatggcc
     2581 gggtacgagg cggcgaaacc gcaggacgcc acgctcctgc accgcctgct tctccaggcg
     2641 acgttcgccc tcggcccgca caagccgcat ccgttctgat gacgacgcgg caccctcacg
     2701 gagtgaattg atgattcgac gcatcgcata cgtgctgctg cccgtcctgc tggcgctcgc
     2761 gccgcgggcc gcgcaggcac agctcaaggt ggtcaccagc acgaccgacc tgtacgacat
     2821 cgcgaaggcg gtgggcggga accgcatcac cgccacccac atcggcgagg gctatcagga
     2881 cccgcacttc atcgaggcga agcccagctt cgtgctgcag ctccgcaacg ccgacgtgtg
     2941 ggcgttcgtc gggctcgacc tggagatcgg ctggatgccg ctgctgctgg acggcgcgcg
     3001 caatccgaag atccggccgg gcggctccgg ctatctcgac gcgtccgcgg ccgtcccggt
     3061 gctcgatcgc ccgcagggca acctcgatcg cagcatgggc gacgtgcacc cgctcggcaa
     3121 tccgcactac tggctcgacc cggagaacgg ccggcgcatc gcccgcctgt tcgaggcgaa
     3181 gttcgcgcag ctcgacccgg cgaacgccgc ggtgtacgac cgcaacgagc gggcgttcga
     3241 ggagcggctg
//
LOCUS       DASSYW010000364         2061 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_388166, whole genome shotgun sequence.
ACCESSION   DASSYW010000364 DASSYW010000000
VERSION     DASSYW010000364.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2061)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2061)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2061
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_388166"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..248)
                     /locus_tag="VFN38_05815"
     CDS             complement(<1..248)
                     /locus_tag="VFN38_05815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011311.1"
                     /translation="MAHSFHRWTPAVRIESTLVVPVVHPRSGFRYAVTEEGGRLYQVE
                     FLVGAGGKRLHELRRRMDWVVGSGRVARTYFSEENGRL"
     gene            complement(579..1853)
                     /gene="serS"
                     /locus_tag="VFN38_05820"
     CDS             complement(579..1853)
                     /gene="serS"
                     /locus_tag="VFN38_05820"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004828 - serine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006434 - seryl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HET9011312.1"
                     /translation="MHDHRLIREQADLLRDGMRRRGKLDALGPVISRGEDIERDRRSL
                     IQAVEERKAARNAMSAEVARRKKAGENADDVIAGGRSLGEEITRLERERADAEAVLES
                     ILYELPNLTLADVPEGGEEANTVVRSWGTPRPADGVRPHWEIGEQRGLLDLPRGAKVA
                     GSGFPAFRGVGARLVRGLMQFMLDLHTRQHGYEEVWVPFVATRQTMTGTAQLPKFEDD
                     MYAIRDEDLFLIPTAEVPVTNLYRDEILEAAELPMALTAYTPCFRKEAGAAGKDTRGL
                     LRLHQFDKVELVRYTTAESSAAEHERLTAHAEAVLQALGLPYRVLLLAAGDTGFASAK
                     TYDLEVWAPGVGKWLEVSSCSNFLDFQARRANIRYRPAAGEKPRFVHTLNGSGLAFPR
                     TIAAILEHYQQPDGSVVVPDALRPYVGIDVIA"
BASE COUNT          317 a          713 c          717 g          314 t
ORIGIN      
        1 aagaggcggc cgttctcctc gctgaaatac gtccgtgcga cgcgtccgct gcccaccacc
       61 cagtccatcc tgcgccgcag ctcgtgcagg cgcttgcctc cggcgccgac gaggaactcg
      121 acctgataga gtcggccacc ctcctcggtg acggcatacc ggaagccgct gcgcggatgg
      181 acgacgggaa cgaccagcgt cgactcgatg cgcaccgccg gcgtccagcg atggaacgaa
      241 tgcgccatgc tgcgctggcc gtatgcatgc gcctggcccg catggcagcc agcgcacgac
      301 gagtcgccgg cgaatgcgac cggctcgctg acgttgcgaa acggaggcga tggggcttcg
      361 gccagcgaat cggcgaccgc gtcggccggg cgtgcctcac cacctgcggc accgcgatcg
      421 caaccgccgg ccgccagcgt ggcgagcagc agcaaccgga cgaggaatcg cggggacgga
      481 gcgctgggcg gcatggggag cggtgaagcg tcaggcgatc gactgcagac ctctcgcgcg
      541 tcgacgccgt cgtccgggcg tcgccgcgtc ctgctcccct aggcgatgac gtcgatcccg
      601 acgtaaggcc gcagcgcgtc gggcacgacg acggaaccgt ccggctgctg gtaatgctcg
      661 aggatcgccg cgatcgtgcg cggaaaggcg aggccgctgc cgttgagcgt gtgcacgaag
      721 cgcggcttct cgcccgctgc cggccgatag cgaatgttgg cgcggcgggc ctggaagtcg
      781 aggaagttcg agcagctcga cacctcgagc cacttgccga cgccgggtgc ccagacctcg
      841 aggtcgtacg tcttggcgct cgcgaagccg gtgtcgccgg cggcgagcag cagtacccga
      901 tacggcagac cgagcgcctg cagcacggcc tcggcgtgcg ccgtcaggcg ctcgtgctcc
      961 gcggccgacg attcggccgt cgtgtagcgc accagctcca ccttgtcgaa ctggtggagt
     1021 cgcagcaggc cgcgcgtgtc ctttccggcg gcgcctgcct ccttgcggaa gcacggcgtg
     1081 tacgcggtga gcgccatcgg cagctcggct gcctcgagga tctcgtcgcg atacaggttg
     1141 gtgacgggga cctcggcggt cgggatgagg aacaggtcct cgtcccggat cgcatacatg
     1201 tcatcctcga acttgggcag ctgtgccgtg ccggtcatcg tctggcgcgt cgccacgaac
     1261 ggcacccaca cttcctcgta cccgtgctgg cgcgtgtgca ggtcgagcat gaactgcatc
     1321 agcccacgaa cgagccgtgc gcccacgccg cggaaggcgg gaaatcccga gccggcaacc
     1381 ttggccccgc gcggaagatc gagaagaccg cgctgctcgc cgatctccca gtgcggacgc
     1441 acgccgtcgg ccggccgtgg cgttccccag ctgcgcacga cggtgttggc ctcttccccg
     1501 ccctccggca cgtcggccag cgtgagattc gggagctcgt acaggatact ctcgagcacc
     1561 gcctcggcgt cggcgcgctc gcgctcgaga cgcgtgatct cctcgccgag cgagcgtccg
     1621 ccggcgatga cgtcatcggc gttctcgccc gccttcttgc gccgcgcgac ttccgcgctc
     1681 atcgcgttgc gagcggcctt tcgctcctcg acggcctgga tcagcgagcg ccgatcgcgc
     1741 tcgatgtcct caccccgact gatgacggga ccgagtgcgt ccagcttgcc gcgtcgccgc
     1801 atgccgtcgc gcagcaggtc cgcctgctcg cggatcaacc gatggtcgtg catgagtcgg
     1861 gcggggggaa cggtgccagc gtgcctaacg cttcggaacg ccgggcagga acgagcggaa
     1921 gccgcaattc ggatcgagcc ggacgcgcag ggtggccgtg cgagcgacgg gatcgatggc
     1981 gatgatgccg atcttggcgt agatctcgga gttgatctcg ctcgcgcaaa ccgggtgctg
     2041 cgacacgacg aacaccgtgt t
//
LOCUS       DASSYW010000365         2061 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1220613, whole genome shotgun sequence.
ACCESSION   DASSYW010000365 DASSYW010000000
VERSION     DASSYW010000365.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2061)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2061)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2061
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1220613"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1920
                     /locus_tag="VFN38_05825"
     CDS             <1..1920
                     /locus_tag="VFN38_05825"
                     /inference="COORDINATES: protein motif:HMM:NF015052.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 57 protein"
                     /protein_id="HET9011313.1"
                     /translation="APADQLSESDRQFCADHFFHAHRARMIDPFPRYAELLATREAGR
                     RRGHAAAGFTTDDLRDLQVWHKLAWIDPFYADRDPRVRELFAKGRDFSEADKQTLRAV
                     ELEILGRVVGEYRAAAERGQVEISTSPFYHPILPLLCDASVFAKTHPSWPLPEQPFVY
                     PQDASEQLRRAVAMHQRLFGRTPTGLWPSEGSVSDAMVPLVAEAGFAWMATDEEILAR
                     SLPRTFARDADLYRAYQVGTGAATVACGFRDHLLSDLVGFTYSSWDPQAAADDFVHRI
                     AATGERYRAHRGGEEATVFVVLDGENAWEHYEGQGRPFLRALYGRLETHPSVRTVTMA
                     EACAGATETLPVIHPGSWINADFYIWIGHADDRRAWGQLSRARRALEHATGVASAEAL
                     AAAREELLIAEGSDWCWWYGDDHHSDHDREFDDLFRRHVRNIYRALGLPIPEDLFVTN
                     ITTMPAKVTSVPPSGPTAPQIDGRESSYFEWLGAGEVTPAATAGAMHQVAAVGQRIAG
                     IRFGFGNDALCLQVATAEPLTDSLAQGGELTVAFLEPAGTRIAINSAHRGGTVFRRTP
                     DGMWLEAPWRDLEAAVETTAELRIPFERLGLREHDELAFVVTLRRSSRDVDESTLTVE
                     TTVPGQGTNRQSWRA"
BASE COUNT          308 a          732 c          711 g          310 t
ORIGIN      
        1 gcgccggcgg atcaactgag cgagagcgat cggcagttct gcgccgacca cttcttccac
       61 gcccatcgcg cgcggatgat cgatccgttt ccgcgctacg cggagctgct cgccacgcgt
      121 gaagccggac gccggcgcgg ccacgccgcc gcgggcttca cgaccgacga cctgcgcgat
      181 ctgcaggtgt ggcacaagct ggcgtggatc gacccgttct acgccgaccg cgatccgcgc
      241 gtgcgggagc tcttcgccaa ggggcgcgac ttctccgaag ccgacaagca gacactccgc
      301 gcggtggagc tcgagattct cggacgcgtg gtcggggagt atcgcgccgc ggccgagcgc
      361 ggccaggtgg agatttccac ctcgcccttc taccacccga tcctgccgct gctgtgcgac
      421 gcctcggtgt tcgcgaaaac tcacccgtcg tggccgctgc cggaacagcc gttcgtctat
      481 ccgcaggacg cctcggaaca gctgcgccgc gccgtggcga tgcaccagcg gctcttcggc
      541 cgcacgccga cggggctctg gccgtcggaa ggctcggttt ccgacgcgat ggtgccgctc
      601 gtcgcggagg ccggcttcgc gtggatggcc acggacgaag agattctcgc gcgctcgctg
      661 ccgcgcacgt tcgcacgcga tgcggacctg tatcgcgcat atcaggtggg cacgggcgcc
      721 gcgacggtcg cgtgtggatt ccgcgatcac ctgctgtccg atctcgtggg cttcacgtac
      781 tcgtcgtggg acccgcaggc cgccgccgac gacttcgtgc atcgcatcgc ggccaccggc
      841 gagcgctacc gcgcacaccg cggcggggaa gaggccaccg tgttcgtcgt cctcgacggc
      901 gagaacgcgt gggaacacta cgaggggcag ggccggccgt ttctgcgggc gctctacggc
      961 cggctcgaga ctcacccgtc cgtgcgcacc gtgacgatgg ccgaggcctg cgccggcgcc
     1021 accgagaccc tgccggtcat tcatccgggc tcgtggatca acgcggactt ctacatctgg
     1081 atcggccacg ccgacgatcg ccgggcctgg ggccagctgt cccgcgccag gcgcgccctc
     1141 gagcacgcga ccggcgtggc cagcgccgag gcgctcgcgg cggcccgcga ggaactgctg
     1201 atcgcggaag gcagcgactg gtgctggtgg tacggcgacg accaccactc ggaccacgat
     1261 cgcgagttcg acgacctgtt ccggcgccac gtgcgcaaca tctaccgggc gctcgggctg
     1321 ccgatccccg aagacctgtt cgtgaccaac atcacgacca tgcccgccaa ggtcacgtcg
     1381 gtgccgccgt ccggtccgac ggcgccgcag atcgacggcc gcgagtcgag ctacttcgag
     1441 tggctgggcg ccggcgaggt gacgccggcc gcgaccgccg gtgccatgca ccaggtggcg
     1501 gctgttggcc agcgcatcgc cggaatcagg ttcgggttcg ggaacgacgc gctctgcctg
     1561 caggtggcga cggccgagcc gctgaccgac tcgctggcgc aaggaggcga gctgaccgtc
     1621 gcattcctcg aacctgccgg gacccggatt gcgatcaaca gcgcccaccg cggcggcacg
     1681 gtcttccggc gcacgccgga cgggatgtgg ctggaagcgc cgtggcggga tctcgaagcc
     1741 gccgtggaga ccaccgcgga actgcgcatt ccgttcgaac gcctcgggct gcgagagcac
     1801 gacgagcttg cgttcgtcgt gacgctccgg cgatcttcac gggacgtgga cgagtccacg
     1861 ctgaccgtgg aaaccaccgt gcctgggcag ggcaccaacc gccagtcctg gcgggcctga
     1921 gcccgcgcca acagccggct cccccgcgct tgtcctccaa tgtcctcgac gtcgcataag
     1981 agacgttatg ttaaccaaga ggcctgaata gtcccggaga aggctcccgg cttcgggctc
     2041 cgggcttcgg ggcttcggcc g
//
LOCUS       DASSYW010000366         4030 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_868533, whole genome shotgun sequence.
ACCESSION   DASSYW010000366 DASSYW010000000
VERSION     DASSYW010000366.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4030)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4030)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4030
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_868533"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1412
                     /gene="lon"
                     /locus_tag="VFN38_05830"
     CDS             <1..1412
                     /gene="lon"
                     /locus_tag="VFN38_05830"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: protein motif:HMM:TIGR00763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HET9011314.1"
                     /translation="GLEDVKDRIVEYIAVRKLRQERGIEADKKSGAILTLIGPPGTGK
                     TSLGQSVAKALGREFARISLGGIRDEAEIRGHRRTYIGALPGRLVRALRDAKTMNPVI
                     LLDEVDKVGADWRGDPSAALLEVLDPAQNSTFRDHYLDVELDLSQVVFIATANIADTI
                     PGPLLDRMEVIRFDGYTTDEKAAIARGYLWPRQRERNGLREDEVTVEDDVLRTVVTDY
                     TREAGVRNLERELGTVLRKTATRIASGEVEPPVAVDDAVVRDALGRAKFFQEAAERTA
                     VPGVATGLAVTGVGGDVLFVEATGMPGKKDGLVLTGQLGDVMKESARIALSYVRGHSE
                     DLGVEPAFFDDREFHVHVPAGAIPKDGPSAGITMVTALASLMSGRPVKHTVGMTGEVT
                     LQGRVLPIGGLKQKVLAAHAAGLTDVILPERNRGDLDDIPEHVREDMTFHPVMTIGEV
                     LEQALEPAQSAASLDGSLS"
     gene            1423..1710
                     /locus_tag="VFN38_05835"
     CDS             1423..1710
                     /locus_tag="VFN38_05835"
                     /inference="COORDINATES: protein motif:HMM:NF013777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HET9011315.1"
                     /translation="MPEEVRQAASLLERRWTISVLYASMAGAHRFNEFRQAVEGVPPQ
                     TLVERLRELERAGVLERRVIPSTPPVVEYRLTPNGRLLAPVVEAVSRWRVC"
     gene            1802..3238
                     /locus_tag="VFN38_05840"
     CDS             1802..3238
                     /locus_tag="VFN38_05840"
                     /inference="COORDINATES: protein motif:HMM:NF014523.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MlaD family protein"
                     /protein_id="HET9011316.1"
                     /translation="MGVDGGGTGADEGGSPIARIAAITAVALAILLVGYLMFAGGGGG
                     YTVKAEFLSGGQLTRGNLVEIGGVRVGTVKKLRLTPEGRAEAEFSVDDAHAPLRTGTR
                     AVIRAGSQSSVANRYIELHLPSERDAGGDVEDGGSIGGIERTTTGVELDQLFQTLDRR
                     TRRSLRGLYAGSYNQWKGRGEEGNRGWRYLGTSLGASSRLFRELSYDRPVLERFLVDS
                     SRFVGALASRRDDLAQLVPNLSRTTGALAREKQALSEVIERLPPFMRTANTTYVNLRA
                     ALDDLEPFVDASKPVARKLRPVIHELRGFTHDGRPTINALADIIGRPGAANDLRELQQ
                     TYPPLARIAVDRAERNGKERDGAFAEMARAFTDSAPIIAHGRPYTPDFVSWFDDFSHT
                     GGYDALGSFSRSQQYFNAFSLEQNVPVPIPQAQRGEVFKKLAKINQFKRCPGASEEPA
                     EDGSNVWSEDEQRELDCREADRPTGPRR"
     gene            3235..>4030
                     /locus_tag="VFN38_05845"
     CDS             3235..>4030
                     /locus_tag="VFN38_05845"
                     /inference="COORDINATES: protein motif:HMM:NF014523.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MlaD family protein"
                     /protein_id="HET9011317.1"
                     /translation="MRRVVLVTLLLGGCLAGAAVMLGAEDRRSASGKHYKVIFDNAFG
                     LTEGGEVKIGGVTAGKIDGFELTKQDPIKVEVGIHVSQEGFDALRTDASCAVRQQSLI
                     GEYFVDCQLGRAARELPDGGTVPVTRTASTIPLDLVNNVMRRPYRERFRIILTELGVG
                     LAGRPGELNEVIRRAHPGLRETTQTLKILADQNRVIRDFIENADHTSRVVHPRRAELS
                     RWAKESSETASVQASRRDDIARQWNRLPVFLSELRPTMTRLEATASE"
BASE COUNT          609 a         1427 c         1480 g          514 t
ORIGIN      
        1 ccgggctcga ggacgtcaag gaccgcatcg tcgagtacat cgccgtgcgc aaactccgcc
       61 aggagcgggg gatcgaagcc gacaagaagt cgggcgcgat cctcaccctg atcggcccgc
      121 ccggcaccgg caagacgagc ctcggccagt cggtcgcgaa ggccctcggc cgcgagttcg
      181 cccgcatcag cctgggcggc atccgcgacg aggcagagat caggggccac cggcgcacgt
      241 acattggtgc gctcccgggc cgcctcgtac gggcgttgcg agacgcgaag acgatgaacc
      301 cggtgatcct gctcgacgag gtggacaagg tcggcgccga ctggcgcggc gacccgtccg
      361 ccgccctgct cgaggtgctc gaccctgccc agaactcgac cttccgcgac cactacctgg
      421 acgtggagct cgacctgtcg caggtcgtgt tcatcgccac ggccaacatc gccgacacga
      481 tccccggccc gctgctcgac cgcatggagg tgatccgctt cgacgggtac accaccgacg
      541 agaaggcggc gatcgcccgc ggctacctgt ggccgcgcca gcgtgagcgc aacggcctgc
      601 gcgaggacga ggtgaccgtg gaggacgacg tgctgcgcac ggtggtgacc gactacacgc
      661 gcgaggccgg agtgcgcaac ctcgagcgcg agctcggcac cgtgctccgc aagaccgcga
      721 cgcgcatcgc gtccggggag gtggagccgc ccgtggcggt ggacgacgcg gtggtgcgcg
      781 acgcactcgg ccgcgccaag ttcttccagg aggcggctga gcgcacggcg gtgccgggcg
      841 tggccaccgg cctggcggtg acgggcgtgg gcggcgacgt gctgttcgtc gaggccaccg
      901 ggatgccggg caagaaggac ggcctggtgc tcaccgggca gctcggcgac gtgatgaagg
      961 agtccgcgcg gatcgcgctc tcctacgtgc gcggccactc ggaggacctg ggcgtggagc
     1021 ccgcgttctt cgacgaccgc gagttccacg tgcacgtgcc ggcgggagcg atcccgaagg
     1081 acggcccgag cgccggcatc acgatggtga ccgcgctggc gtcgctgatg agcggccggc
     1141 ccgtgaagca caccgtcggg atgaccggcg aggtgacgct ccaggggcgc gtgctcccga
     1201 tcggcggcct gaagcagaag gtgctggcgg cgcacgccgc gggcctcacc gacgtgatcc
     1261 tgccggagcg caaccgcggc gacctcgacg acatcccgga gcacgtccgc gaggacatga
     1321 cgttccaccc cgtgatgacg atcggcgaag tgctcgagca ggcgctcgag cccgctcagt
     1381 cggcagcgtc gctggatggc tcgctgtcgt agctgcagac cggtgcccga ggaggttcgc
     1441 caggcggcga gcctcctcga gcggcgctgg acgatctccg tgctctacgc ctcgatggcg
     1501 ggcgcgcacc gcttcaacga gttccgccag gcggtggagg gcgtgccgcc gcagacgctc
     1561 gtcgagcggc tccgcgagct ggagcgcgcc ggcgtgctcg agcggcgcgt gatcccctcc
     1621 accccgccgg tcgtggagta ccggctcacg cccaacggcc gcctgctggc gcccgtggtg
     1681 gaggccgtga gccgctggcg cgtctgctga tcgtcccccg tgtgaggtag gacacaggtg
     1741 cccgttctac cggcgcatag ggaaagcgcg ccaatgtagc ttccctgccc gggtgaacgg
     1801 agtgggggtt gacgggggcg gcacgggggc cgacgagggc ggaagcccga tcgcgcgcat
     1861 tgccgcgatc accgccgtgg cgctcgcgat cctgctcgtg ggctacctga tgttcgccgg
     1921 cgggggcggc ggctacacgg tgaaggccga gttcctgagc ggcggccagc tcacccgcgg
     1981 caacctcgtg gagatcggcg gcgtgagggt gggcaccgtc aagaagctgc ggctcacgcc
     2041 cgaggggcgg gccgaggccg agttctccgt ggacgacgcc cacgcgccgc tgcgcaccgg
     2101 cacgcgcgcg gtgatccgcg ccgggtcgca gtcgtcggtg gccaaccgct acatcgagct
     2161 gcacctgccg tcggagcgcg acgccggcgg cgacgtggag gacggcggct cgatcggcgg
     2221 catcgagcga accaccacgg gcgtggagct cgaccagctc ttccagacgc tcgaccggcg
     2281 cacgcggcgc tcgctgcgcg gcctctacgc gggctcctac aaccagtgga agggccgcgg
     2341 cgaggagggc aaccgcggct ggcgctacct cggcacctcg ctcggcgcgt cgagccggct
     2401 gttccgcgag ctgagctacg accgcccggt gctcgagcgc ttcctcgtgg acagctcccg
     2461 cttcgtcggc gcgctggcat cgcgccgcga cgacctcgcc cagctcgtgc ccaacctgag
     2521 ccgcaccacc ggcgcgctcg cgcgcgagaa gcaggcgctg tccgaggtga tcgagcggct
     2581 gccgccgttc atgcgcaccg cgaacaccac ctacgtgaac ctgcgcgccg cgctcgacga
     2641 cctcgagccg ttcgtggacg cgtcgaagcc ggtggcgcgg aagctgcggc ccgtgatcca
     2701 cgagctgcgc ggcttcacgc acgacgggcg gccgacgatc aacgcgctcg ccgacatcat
     2761 cggccggccg ggcgcggcca acgacctgcg cgagctccag cagacctacc cgccgctcgc
     2821 ccggatcgcg gtggaccgcg ccgagcgcaa cggcaaggag cgcgacggcg cgttcgccga
     2881 gatggcgcgc gcgttcaccg acagcgcccc gatcatcgcc cacggccggc cgtacacgcc
     2941 ggacttcgtg tcgtggttcg acgacttctc gcacaccggc ggctacgacg cgctcggcag
     3001 cttctcgcgc tcgcagcagt acttcaacgc gttcagcctc gagcagaacg tgccggtgcc
     3061 gatcccgcag gcgcagcgcg gcgaggtgtt caagaagctc gcgaagatca accagttcaa
     3121 gcgctgcccg ggcgcgtcgg aggagccggc cgaggacggc tcgaacgtgt ggagcgagga
     3181 cgagcagcgc gagctcgact gccgcgaggc ggaccgtccc acggggccgc ggcgatgagg
     3241 cgcgtggtgc tcgtgacgct gctgctcggc ggctgcctgg ccggcgccgc cgtgatgctc
     3301 ggcgccgagg accggcgcag cgccagcggc aagcactaca aggtgatctt cgacaacgcc
     3361 ttcggcctca ccgagggcgg cgaggtgaag atcggcggcg tcaccgccgg caagatcgac
     3421 ggcttcgagc tgaccaagca ggacccgatc aaggtggagg tcgggatcca cgtgtcgcag
     3481 gagggcttcg acgcgctgcg caccgacgcg agctgcgccg tgcggcagca gtcgctgatc
     3541 ggcgagtact tcgtggactg ccagctcggc cgggccgcgc gggagctgcc cgacggcggc
     3601 accgtgcccg tgacgcgcac cgcgtccacc atcccgctcg acctcgtgaa caacgtgatg
     3661 cggcggccct accgcgagcg cttccggatc atcctcaccg agctgggcgt ggggctggcg
     3721 ggccgtccgg gcgagctgaa cgaggtgatc cggcgcgcgc acccgggcct gcgcgagacc
     3781 acccagacgc tgaagatcct cgccgaccag aaccgggtga tccgcgactt catcgagaac
     3841 gccgaccaca cgagccgcgt ggtgcacccg cgccgggccg agctgtcgcg ctgggcgaag
     3901 gagtcgtcgg agacggcctc ggtgcaggcg tcgcggcgcg acgacatcgc gcgccagtgg
     3961 aaccggctgc ccgtgttcct ctccgagctg cgcccgacca tgacgcggct cgaggccacc
     4021 gcgagcgagc
//
LOCUS       DASSYW010000367         3328 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_645553, whole genome shotgun sequence.
ACCESSION   DASSYW010000367 DASSYW010000000
VERSION     DASSYW010000367.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3328)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3328)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3328
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_645553"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..765
                     /locus_tag="VFN38_05850"
     CDS             <1..765
                     /locus_tag="VFN38_05850"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: protein motif:HMM:NF013845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dimethylallyltransferase"
                     /protein_id="HET9011318.1"
                     /translation="PTPRERQAAPHYGIDVLEPTERASAAWWATEADRWIRDAAAHGR
                     VPIVVGGTGLYLRALFGELFDEPPMHPARRAELQAELGALPTDELRRWVERLDRPRAH
                     LGRTQLLRAAEIALLTGRRMSELLHERRTVPRWRARYLVVDPGPALAGRIAERTRAMF
                     AAGWPDEGRRLRETVPPGAPAWNASGYGAVREMVQGRISFDEAEERVIIETRQYAKRQ
                     RTWFRHQLAGADVTRLDAGAAVVAGPLRRWWGETDA"
     gene            762..1901
                     /gene="bshA"
                     /locus_tag="VFN38_05855"
     CDS             762..1901
                     /gene="bshA"
                     /locus_tag="VFN38_05855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0071793 - bacillithiol biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-alpha-D-glucosaminyl L-malate synthase
                     BshA"
                     /protein_id="HET9011319.1"
                     /translation="MKIGITCYPTYGGSGAVATELGIALAQRGHEIHFITYQQPFRLP
                     SFLPRIYFHEVDVGRYPLFEYPPYDLALAVRMHEVVLHHQLDLLHVHYAIPHATSAWI
                     AREMLIPTRPDIKVLTTLHGTDITIVGQDPSFFAITKFSIEKSDGLTAVSEYLRAETQ
                     SAFGCTGCRIEVIPNFIDPTVYDRTRYAPQLEEQARGRKVLMHISNFRPVKRVRDVVR
                     VYVKVAREVPSILVMVGDGPDRVDAEEEARRLGVEADVFFLGKLDSVAPLLASAHLFL
                     LPTQSESFGLSALEALASGVPVVGSRAGGLPEVVRDGDTGALCAAGDVDGMASAAIAL
                     LEPARWAVASARARDDARARFSMDAVVEQYERFYARAMEGALAAG"
     gene            1987..2751
                     /locus_tag="VFN38_05860"
     CDS             1987..2751
                     /locus_tag="VFN38_05860"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: protein motif:HMM:NF014703.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0050380 - undecaprenyl-diphosphatase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HET9011320.1"
                     /translation="MSLLHALILGIVEGITEFLPVSSTAHLILASKLLALDSEFVKSF
                     EIIIQFGAILSVVVLYFRKFFDWDVLKKLAVAVVPTGVIGLTVYKAVKGYLLGNVTVV
                     LLSLLIGGIALIVFERFQDGTGKAEVDFSEITYRKAFLIGLFQAIAVVPGVSRSAATI
                     VGGSLIGVSKRTIVEFSFMLAVPTMLAATGLELVKGKAALAGNYGVLAVGFVVSFVTA
                     IVAIKSFLGYIKNRDFAAFGWYRIVLAVVYYLVIVR"
     gene            2756..>3328
                     /locus_tag="VFN38_05865"
     CDS             2756..>3328
                     /locus_tag="VFN38_05865"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: protein motif:HMM:TIGR00121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004077 - biotin-[acetyl-CoA-carboxylase]
                     ligase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--[acetyl-CoA-carboxylase] ligase"
                     /protein_id="HET9011321.1"
                     /translation="MGVRDRGEAAAYDGVSSTALAARLGLPAALLFHQVGSTLDVAHR
                     VAADARSGTLILADEQTAGRGRHGRRWTSAPGAGVWLTLVERPTDARALDVLSLRCGL
                     YAAEALDTLAEAPIGVKWPNDLYVGARKLAGILIETRWRGTAPDWVAVGMGLNVAAPD
                     VDTGVGLRPGVSRLQVLDLLVPALRRAAAAS"
BASE COUNT          420 a         1218 c         1171 g          519 t
ORIGIN      
        1 cccacgccgc gcgagcggca ggccgcgccg cactacggca tcgacgtgct cgagccgacc
       61 gaacgtgcgt cggcggcctg gtgggccacc gaggcggatc gctggatccg cgacgcggcc
      121 gcgcacggcc gggtgccgat cgtcgtcggc gggacggggc tgtacctgcg cgccctgttc
      181 ggcgagctgt tcgacgagcc cccgatgcat ccggcccgcc gcgccgaatt gcaggccgag
      241 ctcggggcgc tgccgacgga cgagctgcgt cgctgggtgg agcgcctgga ccggccgcgc
      301 gcgcacctcg ggcgcaccca gctcctgcgg gccgccgaga tcgcgctgct caccgggcgg
      361 cggatgagcg agcttctcca cgagcggcgc acggtgccgc gctggcgggc gcgctatctt
      421 gtcgtcgatc ccggtccggc gctcgccgga cgcatcgccg agcggacccg ggcgatgttc
      481 gctgcggggt ggccggacga ggggcggcgc ctgcgggaga ccgtgccacc cggcgcgccc
      541 gcgtggaacg cctccggcta cggcgcggtt cgtgagatgg tgcagggacg catttccttc
      601 gacgaggccg aggagcgggt gatcatcgag acgcgacagt acgccaagcg ccagcgcacc
      661 tggttccgcc atcagcttgc gggcgcggac gtcacccgcc tcgacgccgg cgccgccgtc
      721 gtggccggcc cgctgcgccg gtggtggggg gagacggacg catgaagatc ggcatcacct
      781 gctatcccac ctacggcggc tcgggcgcgg tggcgacgga gctcggcatc gccctcgcgc
      841 agcgggggca cgagatccac ttcatcacct atcagcagcc cttccgcctc ccgtcgttcc
      901 tgccccgcat ctacttccac gaggtggacg tcggccgcta cccgctgttc gagtacccgc
      961 cgtacgacct cgccctcgcc gtgcgcatgc acgaggtggt gctgcaccac cagctcgacc
     1021 tgctgcacgt gcactacgcg atcccgcacg ccacgagcgc ctggatcgcg cgcgagatgc
     1081 tcatcccgac gcgccccgac atcaaggtgc tcacgacgct gcacggcacc gacatcacca
     1141 tcgtcgggca ggatccgtcg ttcttcgcca tcaccaagtt ctcgatcgag aagtcggatg
     1201 gcctcaccgc ggtgtcggag tacctgcgcg ccgagaccca gtcggcgttc ggctgcaccg
     1261 gctgccggat cgaggtgatc ccgaacttca tcgatcccac ggtctacgac cggacgcgct
     1321 acgcccccca gctcgaggag caggcgcgcg ggcggaaggt gctgatgcac atctccaact
     1381 tccggccggt gaagcgcgtg cgcgacgtcg tgcgcgtcta cgtgaaggtg gcgcgggagg
     1441 ttcccagcat cctcgtcatg gtcggcgacg gccccgaccg cgtcgacgcc gaggaggagg
     1501 cgcgccggct gggggtggag gccgacgtct tcttcctcgg gaagctcgat tcggtggcgc
     1561 cgctgctggc cagcgcccat ctcttcctgc tccccaccca gagcgagtcg ttcggcctca
     1621 gcgcgctgga ggcgctggcg agcggcgtcc ccgtggtggg ctcccgcgcc ggcggcctgc
     1681 ccgaggtggt gcgcgatggg gacaccgggg cgctgtgcgc cgcgggggac gtggacggga
     1741 tggcgtccgc cgccatcgcc ctcctcgagc cggcgcggtg ggcggtcgcc agcgcgcggg
     1801 cgcgggacga tgcccgcgcc cggttcagca tggacgcggt cgtggagcag tacgagcgct
     1861 tctatgcacg cgcgatggag ggcgccctgg ccgccgggtg acgcgccggc gggatgacgg
     1921 ggcggcgacg cgcgctatct tacgggcgcc cgctggccga cgcccacacc gcgcaccctc
     1981 gcccgcatgt cgcttcttca cgcgctcatc ctcggcatcg tcgaggggat caccgagttc
     2041 cttccggtct cctcgacggc gcacctgatc ctcgcgagca agctgctcgc cctggactcc
     2101 gagttcgtca agagcttcga gatcatcatc cagttcggcg cgatcctgtc ggtggtcgtc
     2161 ctgtacttcc ggaagttctt cgactgggac gtcctgaaga agctcgccgt ggcggtcgtc
     2221 cccaccggcg tcatcggcct caccgtgtac aaggcggtga agggctacct tctcggcaac
     2281 gtcaccgtcg tgctcctgtc gctgctcatc ggcggcatcg cgctcatcgt gttcgagcgt
     2341 ttccaggacg gcaccgggaa ggcggaggtg gacttctccg agatcaccta ccgcaaggcg
     2401 ttcctgatcg gcctcttcca ggcgatcgcc gtcgtccccg gcgtgtcgcg ctcggcggcc
     2461 acgatcgtcg gcggctcgct catcggcgtg tcgaagcgca ccatcgtcga gttctccttc
     2521 atgctcgccg tgcccaccat gctcgccgcg accggcctcg agctggtgaa ggggaaggcg
     2581 gcgctcgcgg gcaactacgg cgtgctggcg gtggggttcg tggtcagctt cgtcacggcg
     2641 atcgtcgcga tcaagtcgtt cctcggctac atcaagaacc gcgacttcgc cgccttcggc
     2701 tggtatcgca tcgtgctcgc cgtcgtctac taccttgtca tcgttcgctg acgccgtggg
     2761 cgtccgcgac cggggcgagg ccgccgcgta cgacggcgtg agctccaccg cgctcgcggc
     2821 gcgactcggg ctcccggcgg cgctgctgtt ccaccaggtc ggctccacgc tcgacgtcgc
     2881 gcaccgcgtc gccgcggacg cccggtcggg gaccctcatc ctggccgacg aacagacggc
     2941 ggggcgggga cgccatggcc ggcggtggac ctccgcacca ggcgccggcg tctggctcac
     3001 cctcgtcgag cgccccaccg acgcccgggc cctcgacgtg ctctcgctcc ggtgcggcct
     3061 ctacgccgcc gaggcgctcg acaccctggc ggaggcgccg atcggcgtga agtggccgaa
     3121 cgatctctac gtgggcgcgc gcaagctcgc cggcatcctc atcgagacgc gctggcgcgg
     3181 cacggcgccc gactgggtcg ccgtcggcat ggggctgaac gtcgcggccc cggacgtgga
     3241 caccggcgtc gggcttcgtc ccggcgtctc ccgccttcag gtgctcgacc tgctggtccc
     3301 ggcgctgcgc cgggcggctg ccgccagc
//
LOCUS       DASSYW010000368         4057 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1254190, whole genome shotgun sequence.
ACCESSION   DASSYW010000368 DASSYW010000000
VERSION     DASSYW010000368.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4057)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4057)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4057
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1254190"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..767
                     /locus_tag="VFN38_05870"
     CDS             <1..767
                     /locus_tag="VFN38_05870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011322.1"
                     /translation="TTNAKISQLAGTDTVIDNGFNAHRVGYQPFDWFSQQVVRVDQGP
                     GANQASYNPATNRWTIPKSSVYCATPSGGETPCYNANGTAVAPKVYLGHSSPTFEGSW
                     SNTIRFLDNFRLYSMFDAVSGLKRLDNNIRIRCQIFLTCLEYVQPQNTDPKLLAQYFS
                     GGPLRDFTINDAKYVKFREVSLSYDAASSLAARAGAKTLSITASARNIKTWSPYSGID
                     PESQFVTNATGGTPALVDQAHLPQLLNYSLTFHLSY"
     gene            772..2091
                     /locus_tag="VFN38_05875"
     CDS             772..2091
                     /locus_tag="VFN38_05875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011323.1"
                     /translation="MTHIATRVGRSALVSGLVLTLGFLAACDTGRLLDVTTPNQVPVE
                     ILDQPGNAALLVNSAIGDYQCAFGSAVVVEALIAGEMNDAQLGAAQWDYARRTANTLT
                     NGIYDTAGCVGPQSLGIYRPLSTARFGADNAVTKLKAWTDAEVPNRTGLLALANLYAG
                     FSYSMLGMSMCEAAFDNGPAVKQKGVFALAEQRLTDAIAAAQTVGADSIRFAALVVRA
                     RMRLYQGNTAGALADAQAVPKGFVMNASTAGTASRLYNRVFHVTKQTGFYSIPSWSQN
                     MTTERGQIDPRSATQLAGTKSANNEQTIVYAPNKYISGYAAPMPMAKYEEAQLIIAEI
                     LGGAQAVAIINAMRADVGLLPYIGPIDAASIKNLVIDERKRVLFLEGLRNYDIERFNI
                     PFNPPVGTAFPVGGGTYGNTTCLPLPEVESNNNPSLGPGFVPSTTGS"
     gene            2241..3758
                     /locus_tag="VFN38_05880"
     CDS             2241..3758
                     /locus_tag="VFN38_05880"
                     /inference="COORDINATES: protein motif:HMM:NF014675.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="family 10 glycosylhydrolase"
                     /protein_id="HET9011324.1"
                     /translation="MTHASASRLAVAALALAAACAPPATGPTTRPRPVPSRDPSVVPA
                     LEREFRGLWVATVANIDWPSKPGLPADQQRAELLTLLDRAQAAGMNAILFHVRPNADA
                     VYRSALEPWASMLTGTQGTDPGYDPLELAVAEAHRRGMELHAWINPFRAGSAADSAKL
                     AVNHVFRERRDLVRTYGASLWMDPGDPAVHERSMRAVLDIVNRYDVDGVHLDDYFYPY
                     PQNDSAQRPIAFPDSATYARYGAGMALDDWRRSNVDRFVARLYGDVHAAKPAVRVGIS
                     PFGIWRPGNPALVTGLDSYAAIYADSRKWLQSGWVDYLVPQLYWRIDPPQQSFTALLD
                     WWLSQNSAGRHVWPGLATYRVYSATNPYPLSEMVNQVAATRARGASGLVFYNTTSTLS
                     KGNGEIAAMLRNDYFTDAALPPAAAWLAGTAPARPAIAVAGATLTITPATASPRWWVV
                     RFRTGDLWTTRLVFGTERNVTLTSANGAAPDWVVVNAVNAQGATSADAAWRAGAP"
     gene            3845..>4057
                     /locus_tag="VFN38_05885"
     CDS             3845..>4057
                     /locus_tag="VFN38_05885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011325.1"
                     /translation="MPVHLEFTLDYLIRRSSGVVAPRAGQRLDVFEHTIAALASRWRP
                     ARPIAPARELRMADETRAALLAWVEGD"
BASE COUNT          661 a         1470 c         1324 g          602 t
ORIGIN      
        1 gcaccaccaa cgcgaagatc tcgcagctcg ccggcaccga cacggtgatc gacaatggct
       61 tcaatgcgca ccgcgtgggc taccagccgt ttgactggtt ctcgcagcag gtggtgcgcg
      121 tcgatcaggg gcccggcgcg aaccaggcct cgtacaatcc ggcgacgaac agatggacga
      181 ttccgaagtc cagcgtctat tgcgccacac cgagcggcgg tgagacaccg tgctacaacg
      241 ccaacgggac ggccgtcgcg ccgaaggtgt acctcggcca ctcctcgccg accttcgagg
      301 gatcgtggtc gaacaccatc cgcttcctcg acaacttccg gctgtactcg atgttcgacg
      361 ccgtctccgg cctcaagcgg ctggacaaca acatccgcat tcgctgccag atcttcctca
      421 cctgcctgga gtacgtgcag ccccagaaca ccgatcccaa gctgctcgcc cagtacttca
      481 gcggcggacc gctgcgcgat ttcacgatca acgacgcgaa gtacgtgaag ttccgggagg
      541 tgtccctgtc gtacgacgcg gcgtcgtccc tcgcggcgcg ggccggtgcc aaaacgctca
      601 gcatcaccgc ctcggcgcgg aacatcaaga cctggtcgcc gtactccggc atcgatccgg
      661 agagccagtt cgtcacgaac gctacgggtg ggacgccggc gctggtcgac caggcgcatc
      721 tgccgcaact gctcaactac agcctgacct tccacctgag ctactgagcc aatgacacac
      781 atcgcgacgc gagtggggcg cagcgccctt gtaagcggcc tggtgctcac gctcggcttc
      841 ctggccgcgt gcgacacggg cagactgctc gatgtgacga cacccaacca ggtgccggtc
      901 gagatcctcg atcaaccggg caacgccgcg ctgctggtca acagcgccat cggcgactac
      961 cagtgcgcat tcggctcggc ggtagtcgtc gaggcgctga tcgccggcga gatgaacgat
     1021 gcacagctcg gcgcggccca gtgggactac gcgcgacgga cggccaacac gctgacgaac
     1081 ggcatctacg acacggccgg ctgtgtcggc ccgcagagcc tgggcatcta ccgcccgctg
     1141 tccacggcgc gtttcggcgc cgacaacgcc gtcaccaagc tgaaggcgtg gacggatgcc
     1201 gaagtcccca accgaaccgg cctcctcgcg ctcgccaacc tctacgccgg cttcagctac
     1261 tcgatgctcg ggatgtcgat gtgtgaagcg gccttcgaca acggaccggc ggtgaagcag
     1321 aagggcgtct tcgccctcgc cgaacagcgc ctgaccgatg cgatcgcggc ggcgcagacc
     1381 gtgggtgcgg acagtatacg gttcgccgcc ctcgtcgtgc gcgctcgcat gcgtctgtat
     1441 cagggcaaca cggctggcgc acttgccgat gcgcaggcgg tgccgaaggg tttcgtcatg
     1501 aacgccagca ccgccggcac cgcgtcgcgt ctgtacaacc gcgtctttca cgtcacgaag
     1561 cagaccggct tctactcgat cccgagctgg tcgcagaaca tgacgacgga gcgcggccag
     1621 atcgatccgc gatccgccac gcagctcgcc ggcaccaagt cggcgaacaa cgagcagacc
     1681 atcgtctacg ccccgaacaa gtacatctcc gggtacgcgg cgccgatgcc gatggcgaag
     1741 tacgaggagg cccagctcat catcgcggaa attctgggcg gcgcgcaggc ggtcgcgatc
     1801 atcaacgcca tgcgtgccga cgtcggattg cttccctaca tcggtccgat cgacgcggct
     1861 tcgatcaaga acctcgtgat cgacgagcgc aagcgcgtcc tcttcctcga gggactccgt
     1921 aactacgaca tcgagcggtt caacatccca ttcaaccctc ccgttgggac ggccttcccg
     1981 gtgggtggcg gcacctacgg caatacgacc tgcctgccgc tgccggaagt cgagagcaac
     2041 aacaatccca gcctcggccc gggcttcgtt ccgagcacga ccggttcctg agtcgctgcg
     2101 acgcccggcg ggggaccggc gaaagccggt tccccccgag cgtgatccag gtcgacacac
     2161 gccggaacgg ctcccatgcc aggcggggtg ggagccgttc catcgtcagc ggaggacggc
     2221 aatccatgta gattgaggcc atgacccacg cttcagccag ccgtctcgcc gtcgcggcgc
     2281 tcgcgctcgc cgccgcctgt gctccgcccg ccaccgggcc gaccaccagg ccccgtccgg
     2341 tgcccagccg cgatcccagc gtcgtccccg cgctggagcg cgagttccgc gggctctggg
     2401 tcgccaccgt cgccaacatc gactggccgt cgaagcccgg gctgccggcc gaccagcagc
     2461 gtgccgagct gctgacgctg ctcgatcgcg cgcaggccgc cgggatgaac gccatcctct
     2521 ttcacgtgcg cccgaacgcg gacgcggtgt accggtcggc gctggagccg tgggcctcga
     2581 tgctcacggg gacgcagggc accgacccgg gctacgatcc gctcgagctg gcggtggccg
     2641 aggcccaccg gcgcggcatg gagctgcacg cgtggatcaa tcccttccgc gccggcagcg
     2701 cggccgacag cgcgaagctc gccgtcaacc acgtcttccg cgagcggcgc gacctcgtgc
     2761 gcacctacgg cgcctcgctc tggatggacc cgggcgatcc cgccgtgcac gagcgctcga
     2821 tgcgcgccgt actcgacatc gtgaaccgct atgacgtcga cggcgtgcat ctcgacgact
     2881 acttctaccc ctatccgcag aacgactcgg cgcagcggcc gatcgccttc cccgacagcg
     2941 cgacgtacgc gcgctacgga gcggggatgg cgctcgacga ctggcgccgg tcgaacgtgg
     3001 accgcttcgt cgcgcggctg tacggcgacg tgcacgccgc gaagccggcg gtgcgcgtcg
     3061 gcatctcgcc cttcggcatc tggcgtcccg gcaaccccgc gctggtcacg gggctcgact
     3121 cgtatgccgc catctatgcc gactcgcgga agtggctgca gagcgggtgg gtggactacc
     3181 tggtgccgca gctctactgg cgcatcgatc cgccgcagca gagcttcacc gccctcctcg
     3241 actggtggct ctcgcagaac agcgccggcc ggcacgtgtg gccgggcctg gcgacgtacc
     3301 gggtgtactc cgccaccaac ccgtacccgc tgagcgagat ggtgaaccag gtcgcggcga
     3361 cccgggcgcg cggcgcgtcg gggctggtgt tctacaacac cacctccacc ctgtcgaagg
     3421 gcaacggcga gatcgcggcg atgctccgca acgactactt caccgacgcc gccctgccgc
     3481 cggccgccgc ctggctggcg ggcaccgcgc ccgcccggcc ggcgatcgcc gtggccggcg
     3541 ccacgctcac gatcaccccc gccacggcgt ctccgcggtg gtgggtggtg cggttccgca
     3601 ccggcgacct gtggacgacg cgcctcgtgt tcggcacgga gcgcaacgtg acgctcacgt
     3661 cggcgaacgg cgcggcgccg gactgggtgg tggtgaacgc ggtgaacgcc cagggcgcga
     3721 cgagcgccga cgcggcgtgg cgcgcggggg cgccgtagcg gtcagggcgt cgcgccatcg
     3781 cgatgtgcag ggaatgtgga ttagtgctgg aaagcacgcg gggtgcgtcg ctggcgtacc
     3841 ccccatgcca gtccacctcg agttcaccct cgactacctg atccggcgct cctccggcgt
     3901 cgtggcgcca cgggccggcc agcggctcga cgtcttcgag catacgatcg ccgcgctggc
     3961 cagccggtgg cgtcccgcgc gccccatcgc ccccgcgcgc gagctccgga tggcggacga
     4021 gacgcgcgcg gcgctcctcg cctgggtcga gggcgac
//
LOCUS       DASSYW010000369         2067 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_5303, whole genome shotgun sequence.
ACCESSION   DASSYW010000369 DASSYW010000000
VERSION     DASSYW010000369.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2067)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2067)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2067
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5303"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..309)
                     /locus_tag="VFN38_05890"
     CDS             complement(<1..309)
                     /locus_tag="VFN38_05890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011326.1"
                     /translation="MRMRQIWLCVIAAALAISCGKQESHRPPVHKRPNELHVYVDTTG
                     GVELEGRAMSLDSVKTLLAAQKAAGKVVYYTRERPGSPPTPAQWVVFAQVREVGLPIR
                     F"
     gene            475..1272
                     /locus_tag="VFN38_05895"
     CDS             475..1272
                     /locus_tag="VFN38_05895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011327.1"
                     /translation="MAHAPLPIHRGFGETMRRDTWWVQPAVVFTIFTAFVVYATWAAF
                     QNAHYTWGPYLSPFYSPELFGDSPHALFGPKPAAWPRWLPFSPALIILPFPGLFRFTC
                     YYYRGAYYKAFWADPISCTVGEPRKHYRGEAKFPLIVQNIHRYFLYVALIFLVILASD
                     VWKALWFPGRDGRVHFGIGVGTILLALNVVLLGSYTLGCHSMRHVIGGYLDQLSRRPL
                     RKKAYDCSSCLNRWHMKWAWMSLFSVALSDLYVRLCSMGIVHDWRIL"
     gene            1273..>2067
                     /locus_tag="VFN38_05900"
     CDS             1273..>2067
                     /locus_tag="VFN38_05900"
                     /inference="COORDINATES: protein motif:HMM:NF013086.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HET9011328.1"
                     /translation="MLEHQATDHDVLVIGAGGAGLRAAIEAAASGVSVGLVCKSLLGK
                     AHTVMAEGGVAAALGNVDDRDSWRVHFADTMRGGQYVNNWRMAELHAKEAPARVNELE
                     AWGALFDRTKDGRILQRNFGGHRYPRLAHVGDRTGLEMIRTLQDHGIHQGIDVHMECT
                     VLTLLKDGDRIAGAFAYDRERGRFRLFKARAVVMATGGVGRAYKITSNSWEYTGDGHS
                     LAYHAGAQLMDMEFVQFHPTGMIWPPSVRGILVTEGVRGEGGVLRNS"
BASE COUNT          316 a          687 c          708 g          356 t
ORIGIN      
        1 gaaccggatc gggagcccga cttcgcggac ctgggcgaac acgacccatt gcgcgggagt
       61 gggcgggctg ccgggccgtt cgcgggtgta gtagacgacc ttgccggccg ccttctgcgc
      121 ggcgaggagc gtcttcacgg agtcgaggga catggcgcga ccctcgagct cgacaccgcc
      181 ggtggtgtcg acgtacacgt ggagctcgtt cggtcgcttg tgcaccgggg gacggtgcga
      241 ctcctgcttg ccgcaggaga tcgccagcgc ggcggcgatg acgcagagcc agatctgtct
      301 catcctcatg gagtgcgggt cgttcggcgg gatcgtggtc ggcctgcaac ttcgaacatt
      361 ccacgcggcg atgccagtgg cgccggtcac ggaccacgct cgaccgcgtg cttctggacg
      421 ccgctcgacc cgggctgcac tattgcccgg tcaccgcact ggagcgttga ggagatggcg
      481 cacgcccccc ttccgattca ccgcggcttc ggcgagacga tgcgccgtga cacgtggtgg
      541 gtgcagccgg cagtcgtctt cacgatcttc acggcgttcg tcgtgtacgc gacgtgggcg
      601 gcgttccaga acgcgcacta cacctggggg ccgtatctct cgcccttcta ctcccccgag
      661 ctgttcggcg actcgccgca cgcactgttc gggccgaagc ctgcggcgtg gccgcgctgg
      721 ctccccttct ccccggcgct gatcatcctc ccctttccgg ggctgttccg cttcacctgc
      781 tactactatc gcggcgcgta ctacaaggcg ttctgggccg acccgatcag ctgcaccgtc
      841 ggcgagccgc gcaagcacta tcgcggcgag gcgaagttcc cgctcatcgt ccagaacatc
      901 catcgctact tcctctacgt cgcgctgatc ttcctcgtga tcctggcgag cgacgtctgg
      961 aaggcgctct ggtttcccgg cagggacggc cgcgtgcatt tcgggatcgg ggtcggcacc
     1021 atcctcctcg cgctcaacgt cgtcctcctc ggcagctaca cgttaggctg ccactcgatg
     1081 cgccacgtca tcggcgggta cctcgaccag ctgtcgcgcc gcccgctgcg gaagaaggcg
     1141 tacgactgct cgagctgcct caatcgctgg cacatgaagt gggcgtggat gagcctcttc
     1201 agcgtcgcgc tcagcgacct ctatgtgcgc ctctgttcga tggggatcgt ccatgactgg
     1261 aggatcctct agatgctcga gcaccaggcg accgaccacg acgtcctcgt catcggcgcc
     1321 ggaggggcgg ggctgcgcgc ggcgatcgag gcggcggcga gcggggtcag cgtcggcctc
     1381 gtctgcaagt cgctgctcgg caaggcgcac acggtgatgg ccgagggtgg cgttgccgcg
     1441 gcgttaggca acgtcgacga ccgcgacagc tggcgcgtcc acttcgccga cacgatgcgc
     1501 ggcgggcagt acgtcaacaa ctggcggatg gcggagctcc acgcgaagga ggcgccggcg
     1561 cgcgtcaacg agctcgaggc gtggggcgcg ctcttcgacc ggacgaagga cggccgcatc
     1621 ctccagcgca acttcggcgg ccatcgctat ccccgcctcg cccacgtcgg cgatcgcacc
     1681 gggctggaga tgatccgcac cctgcaggat catgggatcc atcaggggat cgacgtgcac
     1741 atggagtgca cggtgctgac gctcctcaag gacggcgacc ggatcgccgg tgcgttcgca
     1801 tacgatcgcg agcgcggacg cttccgcctc ttcaaggcgc gggcggtggt aatggcaaca
     1861 gggggagttg gtagagcata taagatcacg agcaacagct gggagtacac cggcgacggg
     1921 cactcgctcg cctatcacgc cggcgcgcag ctgatggaca tggagttcgt gcagttccat
     1981 ccgacgggga tgatctggcc gccgagcgtg cgcgggatcc tcgtcacgga gggagtgcgc
     2041 ggcgaggggg gcgtcctccg caacagc
//
LOCUS       DASSYW010000370         2353 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_387248, whole genome shotgun sequence.
ACCESSION   DASSYW010000370 DASSYW010000000
VERSION     DASSYW010000370.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2353)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2353)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2353
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_387248"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..321
                     /locus_tag="VFN38_05905"
     CDS             <1..321
                     /locus_tag="VFN38_05905"
                     /inference="COORDINATES: protein motif:HMM:NF039905.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011329.1"
                     /translation="MDAHGVFVTNHCTCGGGLVIPTGACADDGLFELALIRATSRARL
                     MVSLGRLSAALPLAPGVLEIVRTDRAVIETEREDVFVADGDELATGRRFELAAHRGAV
                     GLLR"
     gene            475..906
                     /locus_tag="VFN38_05910"
     CDS             475..906
                     /locus_tag="VFN38_05910"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014608.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HET9011330.1"
                     /translation="MAAGSSRAPMVITHEGGLKFAAQVRSHRIVVDQPQGAGGEDAGP
                     MPLELLGVSLGTCIALYVQQFCESRKLPYEGMRVEVKQHGAADPGRIGEFVVRVLLPY
                     ELPAHQAELVERVARSCPAHHTLERGAKVSVEIEMSADAVH"
     gene            969..1682
                     /locus_tag="VFN38_05915"
     CDS             969..1682
                     /locus_tag="VFN38_05915"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013278859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008379 - thioredoxin peroxidase activity
                     [Evidence IEA];
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA];
                     GO_process: GO:0098869 - cellular oxidant detoxification
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HET9011331.1"
                     /translation="MIDPMPVTTRAVGLPRLNEPAPQFEALTTHGTVRLSDYEGSWLI
                     LFSHPADFTPVCTTEFAAFAEIAPAMRERHVELLGLSIDSVYSHLAWMRNIRDKLGVE
                     VPFPVIADLDRAVATAYGMIMPGESKTETSRCVFVIDPKAILRAMIYYPLTTGRNMKE
                     LLRLVDALQAADAHQIATPANWEPGQKVIIPAPKTMEELQLRIESGYECADWYLCLKP
                     IDGAAVGAGRPSEPMGANV"
     gene            1682..1954
                     /locus_tag="VFN38_05920"
     CDS             1682..1954
                     /locus_tag="VFN38_05920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011332.1"
                     /translation="MACVNPDGSLTPVAEKVLRALAASTVAETAQAVALATGLPIYRV
                     RASLRELEDAGLLTGEPGPRRVSAAGLAKLASLAPSPAAGAGLHPS"
     gene            1988..>2353
                     /locus_tag="VFN38_05925"
     CDS             1988..>2353
                     /locus_tag="VFN38_05925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011333.1"
                     /translation="MEFFSGAHLHLLVNHAPVLGSFFALALLVASLFVAPDVLRRTGF
                     VVLVVTALGAAAANYSGEPAEDAIRGFPGVRRELIHDHEEVGENAFRAAVVVGLLALG
                     ALVRWRRTPVPRGVTLTVLV"
BASE COUNT          333 a          791 c          877 g          352 t
ORIGIN      
        1 atggacgccc acggcgtgtt cgtcaccaac cattgcacct gcgggggcgg gctggtgatc
       61 cccaccggcg cgtgcgccga cgacggcctg ttcgagctgg cgctgatcag ggcgacgagc
      121 cgcgcacgcc tgatggtgag cctcgggcgc ctctcggccg cgctcccgct cgcgccgggc
      181 gtgctggaga tcgtgcgcac cgatcgcgcc gtgatcgaga cggagcgcga ggacgtgttc
      241 gtggccgacg gcgatgagct cgcgaccggc cgccgcttcg agctggcggc ccaccgggga
      301 gcggtgggtc tgctgcgctg agtaccgcgc ggccgacgat ccacgcgact cggcgacgaa
      361 ttccggacgg cggcgcgtca ggcgaccacc gacagcccgg acctttcgcg cgccctacga
      421 tactcgtgac ggtgggccgg cgtcggccgc cgaaacgatt catggagggt ccgcatggcc
      481 gccgggagct cgcgtgcacc aatggtgatc acgcacgaag gggggctgaa gttcgccgcg
      541 caggtgcgct cgcaccggat cgtggtggat cagccgcagg gtgccggggg cgaggatgcc
      601 gggcccatgc cgctggagct gctcggcgtg tcgcttggca cctgcatcgc gctctacgtc
      661 cagcagttct gcgagagccg caagctgccg tacgagggga tgcgcgtgga ggtgaagcag
      721 cacggcgccg ccgatccggg gcggatcggc gagttcgtcg tgcgggtcct cctgccgtac
      781 gagcttcccg cccaccaggc ggagctcgtg gagcgcgtgg cgcgcagctg cccggcgcac
      841 cacaccctcg agcgcggcgc gaaggtatcg gtggagatcg agatgtcggc ggacgcggtc
      901 cactgagcga tccgcggccg ctcgacggag gatgtgccga ggacaatttc acgaccggag
      961 agtgtgtcat gatcgacccc atgccggtga cgacgcgagc cgtcggtctg ccgagactga
     1021 acgagcccgc tccgcagttc gaggcgctga cgacccacgg caccgtgagg ctcagtgact
     1081 acgagggcag ctggctgatc ctcttctccc acccggcgga cttcaccccg gtgtgcacca
     1141 ccgagttcgc cgcgttcgcg gagatcgcgc cggcgatgcg cgagcggcac gtggagctcc
     1201 tgggcctgag catcgacagc gtgtattcgc acctcgcctg gatgcgcaac atccgcgaca
     1261 agctgggcgt ggaggtgccg ttccccgtca tcgccgacct ggatcgcgcc gtcgcgacgg
     1321 cgtacggcat gatcatgccg ggcgagagca agacggagac gtcgcgctgc gtgttcgtga
     1381 tcgacccgaa ggcgatcctg cgcgcgatga tctactaccc gctcaccacc ggacgcaaca
     1441 tgaaggagct gctgcggctg gtggatgcgc tccaggcggc ggacgcgcac cagatcgcga
     1501 cgccggccaa ctgggagccg ggccagaagg tgatcattcc cgccccgaag acgatggagg
     1561 agctccagct ccgcatcgag tccggctacg agtgcgccga ctggtatctc tgtctcaagc
     1621 cgatcgacgg cgcggcggtg ggcgcagggc ggccgtcgga accgatggga gcgaacgtct
     1681 gatggcgtgc gtgaacccgg acgggtcgct gacgccggtg gcggagaagg tgctgcgcgc
     1741 gctcgcggca tcgacggtgg cggagacggc ccaggcggtc gccctcgcca ccggcctgcc
     1801 gatctaccgg gtgcgtgcga gcctgcggga gctggaagat gcggggctcc tgaccggcga
     1861 gccgggcccc cgtcgggtct cggccgcggg gctggcgaag ctggcgtccc ttgcgccctc
     1921 gcccgcggcc ggtgcagggt tgcacccctc gtaggccgcc gccatccacg ccaccggagt
     1981 cgacaacatg gaattcttct cgggcgccca cctgcacctt ctggtgaacc acgcgccggt
     2041 gctcggctcg ttcttcgcgc tcgcgctact ggtggcctcg ctgttcgtgg cgccggacgt
     2101 gctgcggcgg acggggttcg tcgtgctcgt cgtgacggca ctgggggcgg cggcggccaa
     2161 ctacagcggc gagccggccg aggacgcgat ccggggattc ccgggcgtgc ggcgcgagct
     2221 cattcacgac catgaagaag tgggcgagaa cgcgttccgg gcggcggtcg tggtcggcct
     2281 gctcgcgctc ggcgctctcg tccgctggcg tcgtacgccg gtgccgcgcg gcgtgaccct
     2341 cacggtgctg gtg
//
LOCUS       DASSYW010000371         2192 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1516895, whole genome shotgun sequence.
ACCESSION   DASSYW010000371 DASSYW010000000
VERSION     DASSYW010000371.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2192)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2192)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2192
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1516895"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(221..1141)
                     /locus_tag="VFN38_05930"
     CDS             complement(221..1141)
                     /locus_tag="VFN38_05930"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HET9011334.1"
                     /translation="MNASSLPPVSMVPLSQDGPSLSAIVAGVWRIATWHLEVPDRVRW
                     IEERVALGVTSFDHADIYGDYAAETLFGEALARTPSLREKIQLVSKCGIKLVSERRPA
                     HTINSYDTSRAHVVASVERSLRALHTDRLDLLLIHRPDYLMDPAALAATLTELRAAGK
                     VLHVGVSNHSPSQLALLHRRVPLATNQIELSPLHLEPLDDGTLDQCIDLGLRPMIWSP
                     LAGGRLLAGEHDRARHVHRVLEDIGRSHGVSAATIAYAWLLRHPSRPVPITGSRRLDA
                     LREAVAALGVTLSSEEWYRVWEAGAGHPVP"
     gene            1223..1882
                     /locus_tag="VFN38_05935"
     CDS             1223..1882
                     /locus_tag="VFN38_05935"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HET9011335.1"
                     /translation="MNVLIFGATGMVGQGVLRECLLDPRVRRVLVVGRSSLGRQHDKL
                     REIVLQNLSDLSAIGPELASVDACFFCLGVSSAGMSEEAYAHVTYDLTLSVAGSLARL
                     APGMTFVYVSGAGTDGTEQGRVMWARVKGRTENALLRLPFKAAYMFRPAAIIPLHGIT
                     SRTTWYRVLYAATRPLWPVLRRLAPDYVTTTERVGQAMINVAERGYPTRVLENPDINR
                     A"
     gene            1951..>2192
                     /locus_tag="VFN38_05940"
     CDS             1951..>2192
                     /locus_tag="VFN38_05940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011336.1"
                     /translation="MSDQPDISAARDDVQRARDQIADTIAEIEARVTAPVRAVGQRLD
                     AGRAVREHPWAALAVALGAGVAVAVSGADERAAEFAA"
BASE COUNT          342 a          755 c          793 g          302 t
ORIGIN      
        1 tctatcgctc cgagcggagc tacggaaact tctaccggag cattccgctc cccaccgagg
       61 tgaacgcgga tcaggtgaat gcatcgttcc gcgacggggt gctcgagatc accctgccgt
      121 caccgaagca ggagacgcgg aaggcgaaga agatcgacat tcgctgacgc tctggatgga
      181 acggatgcgc cgggcgcctc gcgacgcccg gcgcagtgcg tcagggcacc gggtgaccgg
      241 cccctgcctc ccacacgcga taccactcct ccgacgagag cgtgacgccg agcgccgcga
      301 ccgcttcgcg cagcgcgtcg aggcgtcgcg agccggtgat cggtacgggg cgggacggat
      361 gccgcagcag ccacgcgtag gcgatggtgg ccgcggacac gccatgcgag cggccgatgt
      421 cctcgaggac acggtgaaca tgccgcgcgc ggtcgtgctc gcccgcgagc aggcgtcccc
      481 ccgcgagcgg cgaccagatc atcggccgca atccgagatc gatgcactgg tccagggtgc
      541 cgtcgtccag cggctcgagg tgcaggggag acagctcgat ctggttggtg gccaggggca
      601 cgcgccggtg gagcagcgcc agctgggacg gcgagtggtt cgacacgccg acgtgcagca
      661 ccttgccggc cgcgcgaagc tcggtcagcg tggcggcgag ggccgcggga tccatcaggt
      721 agtccggacg atggatgagc agaaggtcca gccggtcggt atggagcgcg cggagcgaac
      781 gctccaccga ggccacgacg tgcgcgcgcg aggtgtcgta cgagttgatg gtgtgcgccg
      841 gacgtcgctc ggacacgagc ttgatgccgc acttggagac gagctggatc ttctcgcgta
      901 gcgagggagt cctggccagc gcttcgccga acagcgtctc ggccgcgtaa tccccgtaga
      961 tgtccgcgtg atcgaagctc gtgaccccga gggcgacgcg ctcttcgatc caccgcacgc
     1021 gatccggcac ctcgaggtgc caggtggcga tccgccagac gcccgcgacg atcgccgaca
     1081 ggctcggacc gtcctggctc aacggcacca tggaaaccgg gggcagggag gaagcgttca
     1141 tgccaccaaa cgtcgcgctt cccggggccg cgcgcgagtc gcccgttgcc gcggtggagg
     1201 ggcgacgcta ccctacgccc gcatgaacgt cctgatcttc ggcgcgaccg gcatggtggg
     1261 gcagggcgtc ctgcgcgaat gcctgctcga tccgcgcgtt cgccgcgtgc tggtcgtggg
     1321 acgcagctcg ctggggcgcc agcacgacaa gctgcgcgag atcgtgctgc agaacctgtc
     1381 cgacctctcg gccatcgggc ccgagctcgc cagcgtcgac gcgtgcttct tctgcctggg
     1441 cgtctcctcg gcggggatga gcgaggaagc gtacgcgcac gtcacgtacg acctcacgct
     1501 gtccgtcgcc gggtcgctgg cacgtctcgc ccccggcatg accttcgtgt acgtctcggg
     1561 cgcgggcacg gacggcaccg agcaggggcg cgtgatgtgg gcgcgggtga aggggcgcac
     1621 cgagaacgcg ctgctccgcc tgcccttcaa ggcggcctac atgttccggc cggcggcgat
     1681 catcccgctg cacggcatca cgtcgcgcac cacgtggtac cgcgtgctct atgcggcgac
     1741 gcgtcccctc tggcccgtgc tgcggcgact cgcgcccgac tacgtgacca ccacggagcg
     1801 cgtcggacag gcgatgatca acgtggcgga gcgaggctat ccgacacgcg tcctcgagaa
     1861 ccccgacatc aaccgggcct agcggcgaga gcccgaatcc tgcaaggagg tcgcggcgtc
     1921 gatcctccac cctcgccagg agcagaatcc gtgtccgacc agccagacat ctccgccgcg
     1981 cgcgacgacg tgcagcgcgc ccgggatcag atcgccgaca ccatcgccga gatcgaggcc
     2041 cgcgtgacgg cgccggtgcg ggccgtgggg cagcggctcg acgccggccg cgcggtgcgg
     2101 gagcatccgt gggcggcgct cgcggtcgcc ctgggcgccg gagtcgcggt cgccgtcagc
     2161 ggggccgacg agcgggccgc cgagttcgcc gc
//
LOCUS       DASSYW010000372         2400 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_662423, whole genome shotgun sequence.
ACCESSION   DASSYW010000372 DASSYW010000000
VERSION     DASSYW010000372.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2400)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2400)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2400
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_662423"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..676
                     /locus_tag="VFN38_05945"
     CDS             <1..676
                     /locus_tag="VFN38_05945"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HET9011337.1"
                     /translation="DPRGHGEYDRPRDMWRYTMTLLAEQVVALLDHLEIDEAVVGGTS
                     LGANITLETAVLAPERLRGAVVEMPVLDNALVACAVAFTPLMVALTVGEPVSRVVAGL
                     VRRLPHGGGYFWDVGVDWVGQDPRPSAALLQGLFFGRIAPPRSLRTGIGTRTLVLGHG
                     RDPIHPFSDSDMLVREMPNARLVEAKHILEMRIAPERLTGEVAHFLDECWRPAAAKPR
                     ARRRAS"
     gene            709..1395
                     /locus_tag="VFN38_05950"
     CDS             709..1395
                     /locus_tag="VFN38_05950"
                     /inference="COORDINATES: protein motif:HMM:NF022747.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3105 domain-containing protein"
                     /protein_id="HET9011338.1"
                     /translation="MSSRKDQKAELRAEREQREREAAAAEKRRRTIGYVVGGGLAAAA
                     VIAIVVVLAAGGDGGSSKANSGNWPKGSVPEQKITDLAAATKAAGCQTKDPKDEGNQH
                     LTDPNAVANYKANPPTSGTHFIDPAADGAYLTAPRKEQTVHTLEHGRVEIQFKPTVPN
                     SVKGDLKALFDEDPYHMMIFPNQTDMPYAVAATAWDHQLVCPAYNDKVPDAIRAFKNQ
                     YRDRGPESAP"
     gene            1499..>2400
                     /locus_tag="VFN38_05955"
     CDS             1499..>2400
                     /locus_tag="VFN38_05955"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: protein motif:HMM:NF013661.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_process: GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HET9011339.1"
                     /translation="MKRTLLLLAAAALALSLLISAPAFSLRPYQPAPVDFELAPAASG
                     VHASSSGAITSAPLRAPRRFDVLGLRWSGSAQPHVRLRVRRTGGSWSPWRTLDAHPDH
                     GPDAGTGEHTRAGVVTDAAWAGHSDYVQYRLSRRVPGLRIHFVNTTGSATAADRARTS
                     VRRFVSRGLVTAARLLPARAHAAEAQPAMVSRAEWGAADCPPRAAPSYGEVRAIFVHH
                     TVTLNDYSPEEAKAAVLGICRYHRNSNGWNDIGYNFLVDRFGTIYEGRAGGITQAVVG
                     AQAQGFNSQTFGTASIGTHTSVGVT"
BASE COUNT          354 a          924 c          811 g          311 t
ORIGIN      
        1 cgacccgcgc gggcacggcg agtacgaccg cccgcgggac atgtggcgct acacgatgac
       61 cctcctcgcc gagcaggtgg tggcgctgct cgaccacctc gagatcgacg aggcggtggt
      121 gggcggcacg tcactcggcg ccaacatcac gctcgagacg gccgtgctcg ccccggagcg
      181 gctgcgcggc gcggtggtgg agatgcccgt gctcgacaac gcgctcgtcg cgtgcgccgt
      241 ggccttcacg ccgctgatgg tggcgctcac cgtcggcgag ccggtgtcgc gcgtcgtggc
      301 gggcctcgtg aggcggctgc cgcacggcgg cggctacttc tgggacgtcg gcgtggactg
      361 ggtgggccag gacccgcgac cctcggctgc attgctccag ggactgttct tcggccggat
      421 cgcgccgccg cggtcgctcc gcaccggcat cgggacgcgc acgctggtgc tcggtcacgg
      481 gcgcgacccg atccacccgt tctcggactc cgacatgctc gtacgcgaga tgcccaatgc
      541 ccgcctggtc gaggcgaagc acatcctcga gatgcggatc gcccccgagc ggctcaccgg
      601 cgaggtggcc cacttcctcg acgaatgctg gcgtcccgcg gccgcgaagc cccgcgcccg
      661 gcgccgcgcc tcctagccgc cggcaccgcc ttaatacgct aagagcggat gtcgagccgc
      721 aaggaccaga aagccgagct tcgagcggag cgcgagcagc gcgagcgcga ggccgccgcc
      781 gccgagaagc gccgccgcac gatcggctac gtcgtcggcg gcgggctcgc cgccgccgcg
      841 gtgatcgcga tcgtggtggt tctggccgcc ggtggcgacg gcggctcgag caaggccaac
      901 tcgggcaact ggccgaaggg gtcggtgccc gagcagaaga tcacggatct cgccgccgcg
      961 acgaaggccg ccggctgcca gacgaaggac ccgaaggacg agggcaacca gcacctcacc
     1021 gacccgaacg cggtggcgaa ctacaaggcc aacccgccca cctcgggcac gcacttcatc
     1081 gacccggcgg ccgacggcgc ctacctcacc gcgccccgca aggagcagac cgtgcacacg
     1141 ctcgagcacg gccgcgtgga gatccagttc aagccgacgg tcccgaactc cgtgaagggc
     1201 gacctcaagg cgctcttcga cgaggacccg taccacatga tgatcttccc gaaccagacc
     1261 gacatgccct acgccgtggc ggccaccgcg tgggaccatc agctcgtctg ccccgcctac
     1321 aacgacaagg tgccggacgc gatccgcgcg ttcaagaacc agtaccggga ccgcggcccc
     1381 gagtccgctc cctaggcccc cctcgcgcgc acgcgcgcaa gcctcgttgc atttcgcggt
     1441 tatgcaatag atcgcccagg gccgcaaccg gccgcctggc accgtgttcg gctccttgat
     1501 gaagcgaacc ctcctgctcc tcgcggcggc cgcgctcgcg ctgtcgctgc tcatctccgc
     1561 ccctgccttc tcgctccggc cctaccagcc ggcgccggtg gacttcgagc tcgcgcccgc
     1621 cgcctccggc gtgcacgcgt cgagctcggg cgcgatcacc tccgcgccgc tgcgcgcccc
     1681 caggcgcttc gacgtcctgg gcctgcgctg gtccggcagc gcccagccgc atgtgcgcct
     1741 gcgcgtgcgc aggacgggcg gaagctggag cccctggcgc acgctcgacg cgcatcccga
     1801 ccacggcccc gacgcgggca ccggtgagca cacgcgcgca ggggtcgtga cagacgccgc
     1861 ctgggcgggc cactccgact acgtgcagta ccggctctct cgccgcgtgc cagggctgcg
     1921 gatccacttc gtgaacacca ccggcagcgc caccgccgcc gaccgcgcgc gcacctccgt
     1981 gcgccggttc gtgagccgcg ggctcgtgac cgccgcccgg ctcctccccg ctcgcgccca
     2041 cgcggccgag gcccagcccg cgatggtgtc gcgcgccgag tggggcgccg ccgactgccc
     2101 gccgcgcgca gctccgtcct acggcgaggt gcgcgcgatc ttcgtgcacc acacggtgac
     2161 gctgaacgac tactcgcccg aggaggcgaa ggccgcggtg ctcggcatct gccgctacca
     2221 ccgcaactcg aacggctgga acgacatcgg ctacaacttc ctcgtcgacc gcttcggcac
     2281 gatctacgag ggccgtgcgg gagggatcac gcaggccgtc gtcggcgcgc aggctcaggg
     2341 cttcaactcg cagacgttcg gaacggcgtc gataggaacg cacaccagcg tcggcgtcac
//
LOCUS       DASSYW010000373         2801 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1240259, whole genome shotgun sequence.
ACCESSION   DASSYW010000373 DASSYW010000000
VERSION     DASSYW010000373.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2801)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2801)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2801
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1240259"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..320
                     /locus_tag="VFN38_05960"
     CDS             <1..320
                     /locus_tag="VFN38_05960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011340.1"
                     /translation="LTSDTLAVAVSGGNALLQLPMNRLASIDVSEGRDRLGWSTRGAG
                     IGVIGGGLVGAIAVWQESHGDLGVLAGFFAGGMLGAGSGAIIGALMAPERWNRVRSFG
                     AAR"
     gene            317..781
                     /locus_tag="VFN38_05965"
     CDS             317..781
                     /locus_tag="VFN38_05965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011341.1"
                     /translation="MNAARSLCAVLALALTALHAAGAQSSGGLTITPGTELRLTPRAA
                     GAPQRRGRVVRLAGDTLVLREGDAISHTALSDLAALEVRGGEDKRRGFLIGAGVAAGI
                     TGVFGGIDVSKGNISRDDFVGTLIVNALIGGLVGYAFAPKGWERIPLPASDR"
     gene            835..1746
                     /locus_tag="VFN38_05970"
     CDS             835..1746
                     /locus_tag="VFN38_05970"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone oxidoreductase"
                     /protein_id="HET9011342.1"
                     /translation="MPDPTPGAGEVLVKLESIGVNFIDCYFRKGQYKTALPFTPGSEG
                     AGVVVAVGSGVGDVSVGDRVASQSFLGAYAEMALARADRLVVLPDGLEARDGAAAMLQ
                     GMTAHYLAASTHTLQAGDCCLVHAAAGGVGLLLCQIARRHGAFVIGTVSTPEKAALAR
                     DAGANETINYTKQDFVAEVKRITGGVGVQVVYDSVGATTFLKGLDCLAPRGMMALFGQ
                     SSGPVDAIDPQVLNQKGSLFLTRPTLANYVATPAELRWRAGDVLGWIHDGSLRLRIDR
                     DLPLARAAEAHRALEARETTGKVLLHP"
     gene            1793..2461
                     /locus_tag="VFN38_05975"
     CDS             1793..2461
                     /locus_tag="VFN38_05975"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HET9011343.1"
                     /translation="MRRLLLVLATLSSAACTRQLAAPYPHRSSDRSPAPAAPAPRVVL
                     AGAPTLGRSAVSGGEALNYVLTRALEIPVAGKSMSQLQDTFDEGRDGGRVHRALDILA
                     PRGTPVLAADSGRILRVKVNALGGNTIYATDPQGRIVYYYAHLDAYQKGLVEGLVVAR
                     GDTLGYVGTTGNAPKDTPHLHFQVMRMPPDGKYWDGEPINPYPLFLLLHGAAANDTLV
                     EGTR"
     gene            2433..2747
                     /locus_tag="VFN38_05980"
     CDS             2433..2747
                     /locus_tag="VFN38_05980"
                     /inference="COORDINATES: protein motif:HMM:NF014087.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhbY family RNA-binding protein"
                     /protein_id="HET9011344.1"
                     /translation="MTLSSKERAELRAEAHHLTPLVHVGHQGLTDALFQTLDDALRTR
                     ELVKVALAKTTDVSAKHAAHQLAEKMGADVVQTIGRTCTLFRENPDLKRKAGSPPPWR
                     SA"
BASE COUNT          416 a          995 c          994 g          396 t
ORIGIN      
        1 gcctcacctc cgataccctc gcggtggccg tgagcggcgg caacgcgctg ctgcagctcc
       61 cgatgaatcg gctcgcatcg atcgacgtca gcgaagggcg agatcgactc ggctggagca
      121 cccgcggtgc gggcatcggc gtgatcggcg gaggcctcgt gggcgccatc gccgtctggc
      181 aggaatccca cggcgacctc ggcgtgctcg ccggattctt cgccggcggc atgcttggcg
      241 cgggaagcgg ggccatcatc ggagcgttga tggcaccgga gcggtggaat cgcgtgcgat
      301 cgttcggagc cgcacgttga acgccgcgcg cagcctgtgc gcggtgctcg ccctggcgct
      361 cacggcactg cacgcggcgg gcgcgcagag cagtgggggc ctcacgatca cgcccggcac
      421 cgagctgcgc ctgacgccgc gcgcggcggg ggcgccgcag cgccgcggtc gcgtggtgcg
      481 gctcgccggc gacacgctcg tgctgcgcga gggtgacgcc atctcgcaca cggcactctc
      541 cgacctcgcc gcactggagg tgcgcggcgg cgaggacaag cggcgtggat tcctcatcgg
      601 tgcgggcgtc gccgccggca tcaccggagt cttcggcggc atcgacgtca gcaagggcaa
      661 catcagccgc gacgatttcg tcggcacgct catcgtgaac gcgctcatcg gtgggctcgt
      721 cggctatgcc ttcgcgccca aggggtggga gcgcatccca ttgcccgcca gcgatcgatg
      781 aaggcgatcc gggtccgcga acacgggggg ccggacgtgc tccgcctcga gaccgtgccg
      841 gacccgacac ccggcgcggg tgaagtcctg gtgaagctcg agtcgatcgg cgtgaacttc
      901 atcgactgct acttccggaa gggacagtac aagaccgcgc tgccattcac gccgggaagc
      961 gaaggggccg gggtggtggt cgccgtcggc agcggtgtcg gcgacgtctc cgtcggcgac
     1021 cgcgtggcct cgcagagctt tctcggcgcc tacgccgaga tggcactggc gcgcgccgat
     1081 cggctcgtgg tgctgccgga cgggctcgag gcccgcgacg gcgccgccgc catgctccag
     1141 ggaatgacgg cgcactatct cgccgcgtcc acgcacacgc tccaggcggg cgactgctgc
     1201 ctcgtgcacg ccgccgccgg cggcgtcggc ctgctgctct gccagatcgc gcggcggcac
     1261 ggcgcgttcg tcatcggcac ggtctccacg ccggagaagg ccgcgctcgc gcgcgacgcc
     1321 ggcgccaacg agacgatcaa ctacacgaaa caggacttcg tggccgaggt gaagcgcatc
     1381 acgggcggcg tcggcgtgca ggtggtgtat gactcggtgg gcgcgacgac cttcctcaag
     1441 gggctcgact gcctcgcgcc gcgcggcatg atggcgctgt tcggccagag cagcggcccg
     1501 gtcgatgcga tagatccgca ggtgctcaac cagaagggct cgctctttct cacgcggccc
     1561 acgctggcca actacgtggc cacccccgcc gagctgcgct ggcgcgccgg cgacgtgctc
     1621 ggctggatcc acgacggctc actccgcctg cggatcgatc gcgacctgcc gctggcgcgc
     1681 gcggccgagg cgcatcgcgc gctcgaagcg cgcgagacga cgggcaaggt gctgctgcac
     1741 ccatgagcgc gcgatccgtt acgcgcgcgc atcgcgagtc gtcgcgatag cgatgcgccg
     1801 actcctcctc gttctcgcca cgctgtccag cgccgcctgc acgcggcagc tcgctgcgcc
     1861 ctacccacat cggtcgtccg atcgttctcc cgcgcctgcc gcaccggcgc cacgcgtggt
     1921 gctcgccggg gcgcccacgc tgggccggtc ggcggtgtcg gggggagagg cgctcaacta
     1981 cgtgctcacg cgcgcgctgg agatccccgt ggcgggcaag agcatgtcgc agctccagga
     2041 caccttcgac gaggggcgcg acggcggacg cgtccatcgg gcgctggaca tcctggcgcc
     2101 ccgcggcacg ccggtgctcg cggccgacag cggacgcatc ctgcgggtca aggtcaacgc
     2161 gctcggcggc aacacgatct acgcgaccga cccgcagggg cgcatcgtgt attactatgc
     2221 gcacctggac gcgtaccaga aggggctggt cgaagggctc gtcgtcgcgc gcggcgacac
     2281 ccttggctac gtcggcacga cgggcaacgc gccgaaggac accccgcacc tgcacttcca
     2341 ggtgatgcgc atgccgcccg acgggaagta ctgggacggc gagccgatca acccgtaccc
     2401 gctctttcta cttctccacg gcgccgccgc caatgacact ctcgtcgaag gaacgcgctg
     2461 agcttcgcgc cgaagcccat cacctgacgc cgctggtcca cgtgggccat cagggcctca
     2521 ccgacgccct gttccagacg ctcgacgacg ccctccgcac ccgcgagctc gtgaaggtcg
     2581 cgctggcgaa gacgacggac gtctccgcca agcacgccgc gcatcagctg gccgagaaga
     2641 tgggcgccga cgtggtgcag acgatcggcc gcacctgcac gctgttccgg gagaatccgg
     2701 atctcaagcg gaaggcggga tcgccgccgc cgtggagaag cgcgtaggcg tcaaggttgg
     2761 gtcgtcctga gcgcagcgaa ggacctgcac gtgcaggtcc t
//
LOCUS       DASSYW010000374         2794 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1808279, whole genome shotgun sequence.
ACCESSION   DASSYW010000374 DASSYW010000000
VERSION     DASSYW010000374.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2794)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2794)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2794
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1808279"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..531)
                     /gene="thiD"
                     /locus_tag="VFN38_05985"
     CDS             complement(<1..531)
                     /gene="thiD"
                     /locus_tag="VFN38_05985"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008902 - hydroxymethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0008972 - phosphomethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HET9011345.1"
                     /translation="MKIALTIAGSDSGGGAGIQADLKTFHQFGVFGTSVIVALTAQNT
                     RGVHAVETVSEGMVAAQLAALAEDLPPSALKTGMLADVTLARLVGKAVRQYGWSPLVV
                     DPVMVSTSGHRLLTPEAEDVVRESLLPLAALVTPNLDEAAILTGRAVHDLPSMERAGE
                     TLLRFGAAAALVKGGHL"
     gene            547..1326
                     /locus_tag="VFN38_05990"
     CDS             547..1326
                     /locus_tag="VFN38_05990"
                     /inference="COORDINATES: protein motif:HMM:NF012797.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0001510 - RNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HET9011346.1"
                     /translation="MTSPLRTMIRDLHRRRGRERRGLALAEGVRLVEEALAAELPLRG
                     AAISPALEATTRGRALKSALERRAVRIEPVSESELAALADTEHPQGVVAVVEPRRWTM
                     TDIPVAPGRPVLVLDGVQDPGNVGTILRSALGLGAAGVIALKGTAELTSPKVVRGSMG
                     ALFRLPAVAGDADEFLAWAREHTVELWIAEADGEPLEPGAARRHAASVALVMGNEGAG
                     VGASLQAAARRRVAIRLAPGAESLNVAIAAAILLREVARVE"
     gene            1316..2524
                     /locus_tag="VFN38_05995"
     CDS             1316..2524
                     /locus_tag="VFN38_05995"
                     /inference="COORDINATES: protein motif:HMM:NF013632.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HET9011347.1"
                     /translation="MWSDAELPPWVFVAWFALLGAALGSFLNVCILRWGAEPKQSVMH
                     PPSRCPRCGHAIRWYENIPIFSWLFLRGRCSGCGLPISPMYPAIEAATALIWGGAVAL
                     LGPTLVALQLAVASTLLLGIAVSDSRAFIIPHEFSMGGTAIALAFAAWPDPAGLADAL
                     RGALFGAGLVLLVGELSELALGQEAMGGGDCALMGMVGAFFGWESVWPVLALGAFVGI
                     VLHVAATLRRSTPAEPSAGDQATTATPPGFRWKRVLVLVAGGLALGGLMGVAVRAGVI
                     GSVLRTIFHGTLGAGAAYYLSFVVSKRVLHGPTAQVWGLLGAAVGIVIGSASWGGLLV
                     GVALGAGALALARRRTVEASPESTEDLSAHGYLPFGVGLSIAAILLGFTGGFQRVREI
                     FAEIAPGLGL"
     gene            2521..>2794
                     /locus_tag="VFN38_06000"
     CDS             2521..>2794
                     /locus_tag="VFN38_06000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011348.1"
                     /translation="MRRIVGLLVACALTLGACRGEARQTQARSEQDLARLVDSLRGPV
                     ERATGLRFTAPPRSAMRTRDQVRAYLIRKLDEELPPKRLHGLETTYR"
BASE COUNT          349 a          943 c         1082 g          420 t
ORIGIN      
        1 gagatggccg cccttcacca gcgcggccgc ggcgccgaac cggagcagcg tctcgccggc
       61 acgctccatc gaagggaggt cgtgcacggc gcggccggtg agaatggcgg cctcgtcgag
      121 gttgggcgtg accagagccg cgagcggaag caggctctcg cgcacgacgt cttcggcctc
      181 cggcgtgagc agccggtgcc cggaggtgga taccatcacg ggatccacca ccagcggcga
      241 ccagccgtac tggcggaccg ctttcccgac caggcgcgcg agggtcacgt cggcgagcat
      301 gccggtcttg agcgcggacg ggggcaggtc ctccgccagc gcggcgagct gggcggcgac
      361 catgccctcg gacacggtct ccaccgcatg gacgccgcga gtattctgcg cggtcagggc
      421 gacgatgacc gaggtgccga acacgccgaa ctggtggaag gtcttgaggt cggcctggat
      481 gccggcgccg ccgccggagt ccgatcccgc gatcgtcagc gcgatcttca tgggacgagc
      541 atggccatga cgagccctct gaggacgatg atccgcgacc tccaccggcg ccgcggccgc
      601 gagcggcggg gactggccct cgcggagggc gtgcggctgg tggaagaggc gctcgccgcg
      661 gagctgccgc tccgcggggc cgcgatctcc cccgcgctgg aagctaccac ccgcggaagg
      721 gccctcaaga gcgcgctcga gcggcgcgcg gtgcggatcg agccggtgag cgagagcgag
      781 ctcgccgcgc tcgccgacac ggagcatccc cagggcgtcg tggccgtggt ggagccgcgc
      841 cgctggacga tgacggatat cccggtggcg ccggggcggc cggttctcgt gctcgacggc
      901 gtccaggatc ccggcaacgt cggcacgatc ctgcgctcgg cgctgggtct cggcgcggcg
      961 ggggtcattg cgctgaaggg gacggcggag ctcaccagcc cgaaggtggt gcgcggaagc
     1021 atgggcgcgc tcttccgtct gcccgccgtc gccggagacg cggacgagtt tctcgcttgg
     1081 gcccgcgagc acacggtgga gctctggatt gcggaggccg acggggagcc gctggagccg
     1141 ggcgccgcac gacgacatgc tgcgtcggtg gcactggtca tgggcaacga gggcgcgggt
     1201 gtcggtgcgt cgctccaggc ggccgcgagg cgccgggtgg cgatccgcct cgcgccggga
     1261 gcggagtcgc tcaatgtggc gatcgccgcc gccatcctgc ttcgagaggt cgcgcgtgtg
     1321 gagtgacgcg gagctgcccc cctgggtgtt cgtcgcctgg ttcgcgctgc tcggcgcggc
     1381 gctcggcagc ttcctcaacg tctgcatcct gcggtggggg gcggagccga agcagtcggt
     1441 gatgcatccg ccctcacgct gcccccggtg cgggcacgcg atccgctggt acgagaacat
     1501 ccccatcttc tcctggctct tcctgcgggg cagatgctcg gggtgcgggc tgcccatctc
     1561 cccgatgtat ccggcgatcg aggccgccac cgcgctcatc tggggtgggg cggtcgccct
     1621 gctgggcccc acgctcgtgg ccctgcagct cgcagtggcg tccaccctgc tgctcggaat
     1681 cgccgtgagt gatagtcggg cgtttatcat cccccacgag ttctccatgg gaggcacggc
     1741 gatcgcgctc gctttcgcgg cctggccgga cccggcgggg ctggcggacg ccttgcgggg
     1801 tgccttgttc ggcgccggac tggtgctcct ggtcggagag ttgagcgagc tggcgctggg
     1861 tcaggaggcg atgggcggtg gagactgcgc gctgatgggg atggtcggcg cgttcttcgg
     1921 ctgggaatcg gtgtggccgg ttctcgcgct cggcgccttc gtcggcatcg tgctgcatgt
     1981 cgcggcaacg ctccgccgca gcacgcccgc cgagccgagc gccggcgatc aggcgacgac
     2041 cgcgacgccc cccgggttcc gctggaagcg ggtgttggtg ctcgtcgcgg gtggtctcgc
     2101 actgggaggg ctgatgggtg tggcggtgcg cgcgggcgtg atcgggagcg tgctgcggac
     2161 gatcttccac ggcacgctcg gagccggcgc cgcgtactac ctctcgttcg tggtatccaa
     2221 gcgagtgctg cacgggccga ccgcgcaggt gtggggcctg ctcggcgcgg cggtcggcat
     2281 cgtcatcgga agcgcaagct ggggcggcct cctggtcggc gtcgccctcg gtgccggcgc
     2341 actggccctg gcccggcggc gcaccgtcga ggcgtcgccg gagagcaccg aggacctcag
     2401 cgcccacggc tacctcccct tcggcgtcgg tctcagcatc gcggcgatcc tgctcgggtt
     2461 caccggcggg ttccaacggg tgcgcgagat cttcgccgag atcgcgccgg ggctgggcct
     2521 atgagacgga tcgtcggtct cctggtcgcc tgcgccctga cgctcggcgc ctgccggggc
     2581 gaggcgcgcc agacccaggc caggagcgag caggacctgg cgcgactggt ggacagcctg
     2641 cgagggccgg tcgagcgggc caccggtctt cggttcacgg cgccaccgcg ctcggcgatg
     2701 aggaccaggg atcaggtccg cgcgtacctg atccgcaagc tggacgagga gctgccaccc
     2761 aagcggctgc acgggctgga gacgacctac cgtc
//
LOCUS       DASSYW010000375         5349 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_886038, whole genome shotgun sequence.
ACCESSION   DASSYW010000375 DASSYW010000000
VERSION     DASSYW010000375.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 5349)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5349)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5349
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_886038"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(198..1832)
                     /locus_tag="VFN38_06005"
     CDS             complement(198..1832)
                     /locus_tag="VFN38_06005"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HET9011349.1"
                     /translation="MASLRARLTVAYAFALVGSLILFAAALYVARNARAQQELGTAAL
                     EQGDRALAFLRAASREGTPLTVEREAGEGSGRHGTRVYATEALRSLMERVPGYFIVYD
                     RDDRQIYSSVGIRQLPDEDRAAIDEAAVELVPGGQGISVEVSDSLFGGRLLLAARRDP
                     SLLPNITRVVAGVPTSIAELSPTLLVGTLLVVFPVIILVSVAASYLIAGRAIEPVEML
                     INEVEAITDGRSLHRRLPSDLGNEELSRLGTTLNAMIARLETSFSALRRFTADASHEL
                     KTPLTVLRADVERAMHPNAAGSEAMQALEEALQETARMSDLVDSLLTLARADEGRFDL
                     HREPVALGPLVRDVYETAVILGEPAELDVSMSVLEEGVVDGDARRLRQLFLNLITNAI
                     KYTPRGGRVELSLSQRVGGEIAFTVRDSGIGISAGDLAHVFDRFWRADRARSRGSERA
                     GFGLGLAISQWIAQAHGGRISVQSRLGRGSVFTVMLPLLSDADVAAAGQLRAELRELR
                     EQRDARSERGARDSGDEPASEARAGRLARGGNETGE"
     gene            complement(1834..2502)
                     /locus_tag="VFN38_06010"
     CDS             complement(1834..2502)
                     /locus_tag="VFN38_06010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HET9011350.1"
                     /translation="MRILVIEDDPTVGQYVKRGLEEHRCAVDLTTDGEEGERRASSEA
                     YDLIVLDMRLPGKSGIEVLHSLRAKGFERPVLVLTAQDAVDAKVATLRAGADDYVTKP
                     FAFEELLARVEALARRPRALASPVLQVGDLAIDQATREVRRAGELIELTPKEYTVLEY
                     LARHAGRVMSRTLITEYAWGYHFDPGTNIVDVVINHLRKKVDARHARKLISTVRGVGY
                     VLKE"
     gene            complement(2509..3867)
                     /locus_tag="VFN38_06015"
     CDS             complement(2509..3867)
                     /locus_tag="VFN38_06015"
                     /inference="COORDINATES: protein motif:HMM:NF012385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HET9011351.1"
                     /translation="MTDSKIKVLVAEDEQHLGLILSNFLGGRGYAVHTVTDGRAALDS
                     LRAEAYDVALLDIVMPELDGLEVLKQVRADVDPPEVIIITGNGTIETAISAMKLGAYD
                     YMAKPYRMAEIDVLVRRAWEKRRLARENVLLQSQLDRAGGAHEITTQYAPLLAVLDAV
                     ARVAPSDSPVVISGESGTGKEIVAHMLHRLSGRSGPFVDVGCAALSEGLLESELFGHE
                     RNAFPGADERKLGLMELAAGGTLFLDEVSELSPKLQGKLLRALDQRSFYRVGGTQKVE
                     VDVRVLAATNRDLADRVAHGQFRDDLFYRINTISIELPPLRDRAVDIPLIARQFLKQF
                     GKSSPPSLAADALELLVKYPWPGNVRELKNVIERAVLLAQGPQIRAADLPLQLPGHPP
                     TPISSPAISLAELERRHIETVLHNTNWHQGRAASALGISSKTLYRKIREYNFRRPGGV
                     ED"
     gene            complement(3864..>5349)
                     /locus_tag="VFN38_06020"
     CDS             complement(3864..>5349)
                     /locus_tag="VFN38_06020"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HET9011352.1"
                     /translation="IAAALATGDAPTEVLGGVLARVADTVLASSVSLWLMDETELRCK
                     SRVGAPPPTGAVVRARLAQQSRGGQNDIIVVRLDAAHHPLGALVLTPTTQLSPAERTF
                     LATVADILAPVLRQAAYAQRLESEVIERTRQIDRERRVTERIIDSLPVGLYVIDREYR
                     ISVWNRKRETGMQGVSREEAIGRTIFEILHRQPATVLRREFDEVFATGRLQIFQMEST
                     ATGELRTYRLSKIPMRLDDGPVTHVITVGEDVTEWRQAQDRFSQAEKLAAIGTLAAGV
                     MHEINNPLATIAACAESLELAHEDAPPDVNEGLRLIQSEVLRCKGIVDSLLDFSRPKS
                     ADKSLLDVNAAIERTLFVLKHHTRFKKLQVRVDLDRSLGQVVRANEEQLVQVFMALLL
                     NAMDSMQERGTVALRTKWGDDARSVVAEIVDQGEGIRRADLPKIFEPFFTTKAPGRGT
                     GLGLSICYAIIAEHGGRIEVESTPGEGSIFRILLPRADEPGDTQ"
BASE COUNT          763 a         1901 c         1865 g          820 t
ORIGIN      
        1 tcgcgtgagc gatcacgctg aagatcatcc ccccggtgct gcgctgcttc ttcggcttgg
       61 attcgatcag gttgttgaac atgtcctcgt gatcctacca tgggctaaag gacgggacac
      121 tccactgacg tgatggaaag tatcccacgt cacattaggt gctacccacc cagcattaag
      181 atttcgtgaa gggcgaatta ttctccggtt tcatttccgc cacgcgcgag gcgccccgcc
      241 ctcgcttcgg aagcgggctc atcgccggag tctcgagctc cccgctcact gcgcgcatcc
      301 cgctgctcgc gcagctcgcg cagctcggcg cgaagctgtc cggccgcggc gacgtccgcg
      361 tccgagagga gaggcagcat cacggtgaac accgacccgc ggccgaggcg cgactgcacg
      421 gagatgcgcc cgccgtgcgc ctgggcgatc cactgcgaga tcgccagccc gaggccgaag
      481 ccggcccgct cgctgccgcg cgagcgcgcg cggtcggcgc gccagaagcg gtcgaagacg
      541 tgcgcgaggt cgccggccga gatgccgatc ccggaatcgc gcaccgtgaa ggcgatctcg
      601 ccgccgaccc gctggctcag cgacagctcc acccgcccgc cgcgcggggt gtacttgatg
      661 gcgttggtga tcaggttgag gaagagctgg cgcagccggc gggcgtcccc gtccaccact
      721 ccttcctcga gcacggacat cgacacgtcc agctccgccg gctcgccgag gatcaccgcg
      781 gtctcgtaga cgtcgcgcac cagggggccg agggcgaccg gctcgcggtg gaggtcgaac
      841 cgcccctcgt cggcccgcgc gagggtgagc aggctgtcca cgaggtccga catccgggcg
      901 gtctcctgga gcgcctcctc cagcgcctgc atcgcctcgc tccccgccgc gttgggatgc
      961 atcgcccgct cgacgtcggc ccgcagcacg gtgagcggcg tcttgagctc gtggctcgcg
     1021 tccgcggtga agcgtcgcag cgcgctgaac gaggtctcga ggcgcgcgat catggcgttg
     1081 agcgtcgtcc ccagccgcga cagctcctcg ttgccgagat cggacgggag ccgccggtgc
     1141 agcgagcggc cgtcggtgat cgcctccacc tcgttgatga gcatctccac cggctcgatg
     1201 gcgcggccgg cgatcaggta cgacgccgcg accgagacga ggatgatgac cgggaagacc
     1261 acgaggaggg tgccgacgag cagggtcggg ctcagctcgg cgatggaggt cgggacgccg
     1321 gccaccacgc gggtgatgtt gggaaggagc gagggatcgc gccgcgcggc gagcaggagc
     1381 cggccgccga acagcgagtc gctcacctcg acgctgatcc cctggccgcc gggcacgagc
     1441 tccacggccg cctcgtcgat ggcggcgcgg tcctcgtcgg ggagctggcg gatgcccacc
     1501 gagctgtaga tctggcgatc gtcgcgatcg tagacgatga agtagcccgg cacccgctcc
     1561 atcagcgagc gcagcgcctc cgtggcgtac acgcgggtgc cgtgccgccc cgacccctcc
     1621 cccgcttcgc gctccacggt gaggggcgtc ccctcgcgcg acgcggcccg caggaaggcg
     1681 agcgcgcgat ccccctgctc cagcgccgcg gtgccgagct cctgctgcgc gcgggcattc
     1741 cgtgcgacgt acagcgccgc cgcgaagagg atcaggctgc ccaccagcgc gaaggcgtag
     1801 gcgacggtga gccgcgcgcg cagcgaggcc atgctactcc ttcagcacgt agcccacgcc
     1861 gcgcacggtg gagatgagct tccgcgcgtg ccgggcgtcg accttcttgc ggaggtgatt
     1921 gatcacgacg tccacgatgt tcgtgccggg gtcgaagtga tagccccacg cgtactcggt
     1981 gatgagcgtc cggctcatga cgcggccggc gtgccgggcg aggtactcca ggacggtgta
     2041 ctccttgggc gtcagctcga tcagctcgcc ggcgcgccgc acctcgcgcg tggcctggtc
     2101 gatcgccagg tcgcccacct ggagcacggg cgacgcgagc gcgcgcggac ggcgcgccag
     2161 cgcctcgacg cgcgcgagca gctcctcgaa ggcgaacggc ttcgtcacgt agtcgtccgc
     2221 gccggcgcgg agggtggcga ccttggcatc caccgcatcc tgggcggtga gcaccagcac
     2281 cgggcgctcg aagcccttcg cccgcagcga gtgcagcacc tcgatcccgc tcttcccggg
     2341 gagccgcatg tccagcacga tcaggtcgta cgcctccgag ctggcgcgcc gctccccctc
     2401 ctcgccgtcg gtggtgaggt ccacggcgca gcgatgctcc tccagccccc gcttcacgta
     2461 ctggccgacg gtggggtcgt cctcgatcac gaggatgcgc atgcggcgct agtcctcgac
     2521 gccgccggga cggcggaagt tgtactccct gatcttgcga tagagcgtct tggagctgat
     2581 gcccagcgcc gacgccgccc gcccctgatg ccagttcgtg ttgtgcagca cggtctcgat
     2641 gtgccgccgc tccagctcgg ccagcgagat cgccggcgac gagatcgggg tgggcgggtg
     2701 ccccggcagc tgcagcggca ggtcggcggc gcggatctgc ggtccctggg ccagcagcac
     2761 ggcgcgctcg atcacattct tcagctcgcg cacgttgccg ggccacgggt acttcacgag
     2821 cagctccagc gcatcggcgg cgagcgacgg cggcgacgac ttgccgaact gcttgaggaa
     2881 ctgccgcgcg atgagcggga tgtccaccgc gcggtcgcgc agcggcggca gctcgatgga
     2941 gatcgtgttg atgcggtaga acaggtcgtc gcggaactgg ccgtgcgcca cgcggtcggc
     3001 gaggtcgcgg ttcgtggccg cgagcacccg cacgtccacc tccaccttct gcgtcccccc
     3061 cacccggtag aagctgcgct ggtcgagcgc gcgcagcagc ttcccctgca gcttgggcga
     3121 cagctcgctc acctcgtcga ggaacagcgt cccccccgcc gcgagctcca tcagccccag
     3181 cttgcgctcg tcggcgccgg ggaaggcgtt gcgctcgtgg ccgaacagct cgctctcgag
     3241 cagtccctcg ctcagcgccg cgcacccgac gtccacgaac gggccgctgc gccccgacag
     3301 gcggtgcagc atgtgcgcga cgatctcctt tccggtgccc gattcgccgc tgatgaccac
     3361 cggcgaatcg ctgggcgcca cgcgcgccac ggcgtcgagc acggcgagca gcggcgcgta
     3421 ctgcgtggtg atctcgtgcg cgccccccgc gcgatcgagc tgcgactgga ggagcacgtt
     3481 ctcgcgcgcc agccgccgct tctcccacgc acggcgcacg agcacgtcga tctcggccat
     3541 gcggtacggc ttggccatgt agtcgtaggc gccgagcttc atcgcgctga tggccgtctc
     3601 gatggtgccg ttgccggtga tgatgatgac ctccgggggg tccacgtcgg cccgcacctg
     3661 cttcagcacc tccagcccgt cgagctccgg catcacgatg tcgagcagcg cgacgtcgta
     3721 cgcctccgcg cgcagcgagt cgagcgcggc gcggccgtcg gtcacggtgt gcacggcgta
     3781 gccgcgcccc ccgaggaagt tggacaggat cagcccgagg tgctgctcgt cctcggccac
     3841 cagcaccttg atcttcgaat cggtcactgc gtgtctccgg gttcgtcggc acgcggcagg
     3901 aggatgcgga agatgcttcc ctcgccgggc gtgctctcga cttcgatgcg cccgccgtgc
     3961 tcggcgatga tggcgtagca gatggacagg cccagtcccg tgccgcggcc cggggccttg
     4021 gtcgtgaaga agggctcgaa gatcttgggc aggtcggccc ggcggatccc ctccccctga
     4081 tccacgatct ccgccacgac ggagcgggcg tcgtcgcccc acttggtgcg cagcgccacc
     4141 gtgccgcgct cctgcatgga gtccattgcg ttgaggagga gcgccatgaa gacctgcacc
     4201 agctgctcct cgttcgcgcg gaccacctgg cccagcgacc ggtcgaggtc cacccgcacc
     4261 tggagcttct tgaaccgcgt gtggtgcttg agcacgaaca gggtgcgctc gatcgccgcg
     4321 ttcacgtcca gcagcgactt gtcggccgac ttgggccggc tgaagtcgag gagcgagtcc
     4381 acgattccct tgcagcgcag cacctcgctc tggatcaggc gcagcccctc gttgacgtcg
     4441 gggggcgcat cctcgtgggc gagctccagg ctctcggcac aggcggcgat ggtggcgagg
     4501 ggattgttga tctcgtgcat cacccccgcg gcgagcgtgc cgatggcggc gagcttctcg
     4561 gcctgggaga atcgatcctg cgcctggcgc cactcggtca cgtcttcccc gacggtgatg
     4621 acgtgcgtca ccggcccgtc gtcgagccgc atcgggatct tggagagacg gtacgtccgc
     4681 agctcgccgg tcgccgtgga ctccatctgg aagatctgga gccggcccgt ggcgaacacc
     4741 tcgtcgaact cgcgccgcag caccgtggcc ggctgccggt ggaggatctc gaagatggtg
     4801 cggccgatcg cctcctcgcg cgacactccc tgcatgcccg tctcgcgctt gcggttccac
     4861 accgagatcc gatattcccg gtcgatcacg tagaggccta ccgggagcga gtcgatgatg
     4921 cgctcggtga cgcgccgctc gcggtcgatc tgccgcgtac gctcgatgac ctcgctctcc
     4981 agccgctggg cgtacgcggc ctgccggagc acgggcgcga ggatgtccgc caccgtggcc
     5041 aggaaggtcc gctccgccgg gctgagctgc gtcgtgggcg tcaggacgag cgcgccgagc
     5101 ggatgatggg cggcgtcgag ccgcacgacg atgatgtcgt tctgccctcc ccgcgactgc
     5161 tgcgcgaggc gggcgcgcac cactgcgccg gtggggggcg gagccccgac gcgggacttg
     5221 cagcgcagct cggtctcgtc catcagccag agcgagacgc tcgaggcgag aacggtgtcg
     5281 gccacgcggg cgaggacccc accgagcacc tcggtggggg catcaccggt ggcgagcgcg
     5341 gccgcgatc
//
LOCUS       DASSYW010000376         3007 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_216566, whole genome shotgun sequence.
ACCESSION   DASSYW010000376 DASSYW010000000
VERSION     DASSYW010000376.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3007)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3007)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3007
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_216566"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..194)
                     /locus_tag="VFN38_06025"
     CDS             complement(<1..194)
                     /locus_tag="VFN38_06025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011353.1"
                     /translation="MQKGDTIGVVASSYSPRAGWLARGVRALERAGYGVLVDPELATT
                     RRYQRAEDERRAESFTKMWL"
     gene            complement(223..2217)
                     /locus_tag="VFN38_06030"
     CDS             complement(223..2217)
                     /locus_tag="VFN38_06030"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HET9011354.1"
                     /translation="MSHDPDADFIALQAALAGEYSLDRELGRGGMGIVYLAREVRLAR
                     PVAIKILPPELARQAELRDAFLHEAQTAARLTHPNIVPVYAAGERGGYAYIVMAYVDG
                     ITLGERIRTRGPLLPGQAARMLREVSWALAYAHAAGIVHRDVSAENILLERGTDRAIV
                     MDFGIASAMQTSAQAADGRIMGNAHYVSPEQAAGEPLDARSDLYSLGVVGFYALTGRL
                     PFDGSTPQVVVTRHLTMPAPPIASIATAVPARLAQAVDRCLAKDPVRRYRGAEAFAEA
                     IDLAFEHAREIPAALRVWISQGERELPARLALVGMSAAVGVPLVIATMNSWFYLLPMS
                     IATGVSFIPTVMRLRRVLRDGYHVDDLHAALKEHALLRSEEIEYERSQRSALTQNIMK
                     VIFAGSVGAGLTLARLVATAPSTGHVAYGYALGLMISLSMLTLSSVSLIGDFLRLRLS
                     ARLAATSISFWKSRWGTRLARFAGIGLKTADRPALGMPLLTEVALGRATDHLFQALPK
                     AARRELAALPGTVRRLGDDAGALRESIDALDAQLAAFDRGDDGLADAERTRVADELRS
                     ARAQAVERLAATVAAIENIRLDLLRLQMGSTGIESVTASLDAARRIGQQISEALDAQE
                     QVERLLRRTTRDLRGPSASSIVEDDDDADTPVSGVPATRG"
     gene            2365..>3007
                     /locus_tag="VFN38_06035"
     CDS             2365..>3007
                     /locus_tag="VFN38_06035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HET9011355.1"
                     /translation="MATPANDQSATYFRKGFGLRADVQSELSADYNGRIVDALREHEY
                     TLVVEDVTIRLASEFGFCYGVERAVEYAYQTHRKFPDRRLLLVGEIIHNPHVNAKLRA
                     MGIEILEPDANGVFDFSVVRPEDVVILPAFGVTIAAFDALRAIGCVLVDTTCGSVLNV
                     WKRVEAYARDGFTALIHGKYYHEETRATASQVMKYPGGAYLIVRDMSEAREVCD"
BASE COUNT          438 a         1013 c         1123 g          433 t
ORIGIN      
        1 tcgagccaca tcttcgtgaa gctctcggcg cgccgctcgt cctcggcgcg ctggtagcgg
       61 cgggtcgtgg cgagctcggg atcgacgagg acgccgtagc cggcgcgctc gagcgcccgc
      121 accccgcgcg cgagccatcc agcgcgaggt gagtacgagg aagcgacgac gccgatcgtg
      181 tcccccttct gcaacggcgc agggcggagg agcggtgagg gttcagccac gcgtcgcggg
      241 gacgccgctc acgggagtgt cggcgtcgtc gtcgtcctcg acgatcgacg atgcggacgg
      301 cccgcgcagg tcgcgcgtcg tgcggcgcag cagccgctcc acctgctcct gcgcatcgag
      361 cgcctcgctg atctgctggc cgatccggcg cgccgcgtcg agcgaggcgg tgaccgactc
      421 gatcccggtg cttcccatct gcaggcggag gaggtcgagg cggatgttct cgatcgcggc
      481 gacggtggcg gcgagccgct cgaccgcctg cgcgcgtgcg ctccgaagct cgtccgccac
      541 ccgcgtgcgc tcggcatcgg cgagtccatc gtcgccccgg tcgaacgccg cgagctgcgc
      601 gtccagcgcg tcgatgctct cgcgcagggc gccggcatcg tcgccgaggc gtcgcacggt
      661 gccgggaagc gcggcgagct cgcgccgcgc cgccttgggc agcgcctgga acagatgatc
      721 ggtggcgcgg ccgagcgcga cctcggtgag cagcggcatg ccgagcgcgg ggcggtcggc
      781 ggtcttgagg ccgatgccgg cgaacctggc gaggcgcgtg ccccagcggc tcttccagaa
      841 ggagatggac gtggcggcga gccgcgcgct gagtcgcagg cgaaggaagt cgccgatgag
      901 ggagacgctc gagagcgtga gcatgctcag cgagatcatc aacccgagcg cgtagccgta
      961 ggccacgtgc ccggtggatg gcgccgtcgc gaccagccgg gccagggtca gcccggcccc
     1021 gaccgatccg gcgaagatga ccttcatgat gttctgggtg agcgccgacc gctgcgagcg
     1081 ctcgtactcg atctcctcgc tgcgcagcag cgcgtgttcc ttgagcgcgg cgtgcaggtc
     1141 gtccacgtga tagccatccc tcagcacgcg gcgcagacgc atcacggtcg ggatgaagct
     1201 caccccagtg gcgatgctca tcggcaggag gtagaaccac gagttcatcg tggcgatcac
     1261 gagcggcacg cccacggcgg cgctcatgcc gacgagcgcg agacgcgccg gcagctcgcg
     1321 ctcgccctgg ctgatccaca cgcgcagcgc cgcggggatc tcgcgtgcgt gctcgaaggc
     1381 gagatcgatc gcttcggcga acgcctcggc gccgcggtag cggcgcacgg gatccttggc
     1441 gagacagcgg tccaccgcct gggcgagacg cgccgggacg gcggtggcga tggacgcgat
     1501 gggcggcgcg ggcatcgtga ggtgcctggt cacgacgacc tggggcgtgg acccgtcgaa
     1561 ggggaggcgg ccggtgagcg cgtagaagcc gacgacgccg agtgagtaga ggtcgctgcg
     1621 ggcgtcgagc ggctcgcccg ccgcctgctc ggggctgacg tagtgcgcgt tgcccatgat
     1681 gcggccgtcg gcggcctgcg cggacgtctg catcgcgctc gcgatgccga agtccatgac
     1741 gatcgcgcgg tcggtgcccc gttcgagcag gatgttctcc gcgctcacgt cgcggtgcac
     1801 gatccccgcc gcatgcgcgt acgccagcgc ccacgacacc tcgcgcagca tgcgcgccgc
     1861 ctgccccggg aggaggggtc cgcgcgtgcg gatccgttcg cccagggtga tcccgtccac
     1921 gtacgccatc acgatgtagg cgtagccgcc gcgttcgccc gcggcgtaca ccggcacgat
     1981 gttcgggtgc gtgagccggg ccgccgtctg cgcttcatgc aggaaggcgt cgcgcagctc
     2041 ggcctgacgg gccagctcgg ggggcaggat cttgatggcc accggccggg cgagccggac
     2101 ctcgcgggcg aggtacacga tccccatccc gccgcggccc agctcgcggt cgagcgagta
     2161 ttcgccggcg agcgccgcct ggagcgcgat gaagtccgcg tcggggtcgt gggacatggg
     2221 gccaaggtag gtcacgatcg cggggggtgc cactggggca cgcttcggcc cggccgcgcg
     2281 ttgaccgata ctcaggcgac cgcacttccg aggccctccg tgaccgcgtt ctcccgtcgt
     2341 agcccgtacg ctagattgca ggacatggca acgcccgcga acgaccagtc cgccacgtac
     2401 ttccggaagg ggttcggcct gagggccgac gtccagtccg agctgtcggc ggactacaac
     2461 gggcggatcg tggatgcgct gcgcgagcac gagtacacgc tggtggtcga ggacgtcacg
     2521 atccgcctgg ccagcgagtt cggcttctgc tacggggtcg agcgtgcggt cgagtacgcc
     2581 tatcagacgc accgcaagtt ccccgaccgg cgcctgctgc tcgtcggcga gatcatccac
     2641 aacccgcacg tgaacgccaa gctgcgggcg atgggtatcg agatcctcga gcccgacgcc
     2701 aacggcgtgt tcgacttcag cgtcgtgcgc ccggaggacg tggtgatcct gccggcgttc
     2761 ggagtgacga tcgccgcgtt cgacgcgctg cgcgcgatcg ggtgtgtgct ggtggacacg
     2821 acgtgcggct cggtgctcaa cgtgtggaag cgcgtcgagg catatgcgcg cgacggcttc
     2881 accgcgctga ttcacgggaa gtactaccac gaggagacgc gcgcgaccgc ttcgcaggtg
     2941 atgaagtacc cgggcggagc gtacctgatc gtgcgcgaca tgagcgaagc gcgcgaggtg
     3001 tgcgact
//
LOCUS       DASSYW010000377         2086 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1825555, whole genome shotgun sequence.
ACCESSION   DASSYW010000377 DASSYW010000000
VERSION     DASSYW010000377.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2086)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2086)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2086
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1825555"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1009)
                     /locus_tag="VFN38_06040"
     CDS             complement(<1..1009)
                     /locus_tag="VFN38_06040"
                     /inference="COORDINATES: protein motif:HMM:NF012296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HET9011356.1"
                     /translation="MTAATAPGPRPRYPGQFAFAVTRRPLEFLPRLARDYGDVAAFGI
                     GPQPIVLLSHPDHIRDVLVTHARRFHKGRGLERARMLLGDGLLTSEGEFHLRQRRLVQ
                     PAFHRARIIGYGETMAAYASRRADGWTDGATLDVAAEMAAYTLAVVGKTLFDADVEGE
                     AQEIGDALSTAIRTFNFTVLPWGELMLRLPLPITRRFRRARQRLDATIYEMIARRRAS
                     GEDKGDLLSMLLLAHDTEGDGTGMTDVQLRDEAMTLLLAGHETTANALTWAWYLLAQH
                     PAAESALHAEVDALGDRPLGADDLARLPYTRAVLAETMRLYPPAWIVGRRALEAYEVG
                     GH"
     gene            1117..1743
                     /locus_tag="VFN38_06045"
     CDS             1117..1743
                     /locus_tag="VFN38_06045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011357.1"
                     /translation="MAVREFTDSRGVDWRAWDVTPTHMHPVTRGEDYMANLQDGWLVF
                     ESGREKRRLEAPYPGNWNVLPIPELEELCRRASPVRRVRERTNSGQRRAISAQEIEKV
                     AIEQEGGRVTFRSPAGREWTARIHECMDRGGAPEMVLRFTADDIVVELPTWPENWRNA
                     SVEDFALMLLDANPPRRLPKGKGPQRRREDRVDMGDAQRTAAAAHRAD"
     gene            1814..>2086
                     /locus_tag="VFN38_06050"
     CDS             1814..>2086
                     /locus_tag="VFN38_06050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011358.1"
                     /translation="MRPRLPALSLLVLLCAATPAQGAGVAGRVPRLPAPLSLSVVQTS
                     DSALTLDSNSPATAGPHSMYVSYRISNTGGVSVANLSATLGGFSGGI"
BASE COUNT          306 a          716 c          782 g          282 t
ORIGIN      
        1 cgtgcccacc cacttcgtac gcctcgagcg cacgccggcc gacgatccac gccggcggat
       61 acagccgcat cgtctccgcc agcacggcgc gggtgtaggg cagacgcgcc aggtcgtcgg
      121 cgccgagcgg ccgatcgccg agggcatcga cctcggcgtg gagcgccgac tcggccgccg
      181 ggtgctgggc gagcaggtac cacgcccacg tgagcgcgtt cgccgtcgtc tcgtgaccgg
      241 cgaggaggag ggtcatcgcc tcgtcgcgaa gctgcacgtc ggtcatgccg gtgccgtcgc
      301 cttccgtgtc gtgcgcgagc aggagcatcg acagcaggtc gcccttgtcc tcgccgctcg
      361 cacggcggcg cgcgatcatc tcgtagatcg tggcgtccag ccgctggcgc gcccgccgga
      421 agcgcctcgt gatgggcagt gggaggcgga gcatcagctc tccccacggc agcacggtga
      481 agttgaaggt ccggatcgcc gtggagagcg cgtcgccgat ctcctgcgcc tcgccttcga
      541 cgtcggcatc gaacagcgtc ttgcccacga cggcgagggt gtacgcggcc atctcggcgg
      601 cgacgtcgag cgtcgcgccg tcggtccagc cgtcggcccg gcggctcgcg tacgccgcca
      661 tcgtctcgcc gtagccgatg atccgcgcgc ggtggaacgc gggctggacg agccgacgct
      721 gtcgaagatg aaactccccc tcgctcgtga gcaggccgtc gccgagcagc atcctggcgc
      781 gctcgagccc ccgccccttg tggaagcggc gcgcgtgcgt gacgaggacg tcccggatgt
      841 gatccggatg gctgaggagg acgatgggct gcggcccgat gccgaaggcc gccacgtccc
      901 cgtagtcccg cgcgaggcga gggagaaact cgagcggccg gcgcgtcacg gcgaaggcga
      961 actggccggg atagcgtggt cgcgggcccg gagcggtggc cgcggtcatg gggcgaagat
     1021 acccgggccc tcatggaggc gcgacggctg gtcggccccg tccggtacga cccttgaata
     1081 ggtgcggggc gcttacccac cgcaacgagg aacggaatgg ccgtgcgaga gttcaccgac
     1141 agcagggggg tcgactggcg ggcgtgggac gtgacgccca cgcacatgca ccccgtcacc
     1201 cgcggcgaag actacatggc caacctgcag gacgggtggc tggtgttcga atccggccgc
     1261 gagaagcgcc ggctcgaggc accctatccg ggcaactgga acgtgctgcc cattccggag
     1321 ctcgaggagc tgtgtcggcg ggcgagcccg gtgcgtcgcg tgcgggaaag gaccaacagc
     1381 gggcagcggc gggcgatcag cgcgcaggag atcgagaagg tcgcgatcga gcaggagggc
     1441 ggtcgggtca ccttccgaag tccggcgggg cgcgagtgga cggcgcgcat ccacgagtgc
     1501 atggatcgcg gcggcgcgcc cgagatggtg ctgcgcttca cggcggacga catcgtcgtg
     1561 gagctgccca cgtggccgga gaattggcgc aacgcgtccg tggaggactt cgcgctgatg
     1621 ctcctcgacg cgaacccgcc gcggcgcctc cccaagggca aggggccgca gcggcggcgc
     1681 gaggaccggg tggacatggg cgacgcgcag cggacggcgg cggccgcgca ccgcgcggat
     1741 taggcggtcg cggccgcaca tcggccgatc gtcaccgcgg gtgacggtcg tgcccccggg
     1801 gcgtcttttc ctgatgcgcc cacgcttgcc agccctgtct ctcctcgtcc ttctgtgcgc
     1861 ggccacgccc gcgcaaggcg cgggcgtggc cggtcgcgtg ccccggctgc cggcgccact
     1921 ctcgctgagc gtcgtgcaga ccagcgacag cgccctgacc ctcgacagca actcaccggc
     1981 gaccgccgga ccgcattcga tgtacgtgtc gtaccggatc tcgaacaccg gcggcgtgag
     2041 cgtcgcgaat ctctcggcga cgctcggggg attcagcggc gggatc
//
LOCUS       DASSYW010000378         2282 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_94728, whole genome shotgun sequence.
ACCESSION   DASSYW010000378 DASSYW010000000
VERSION     DASSYW010000378.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2282)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2282)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2282
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_94728"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            238..918
                     /locus_tag="VFN38_06055"
     CDS             238..918
                     /locus_tag="VFN38_06055"
                     /inference="COORDINATES: protein motif:HMM:NF019500.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ion channel"
                     /protein_id="HET9011359.1"
                     /translation="MPEGLKEWSHNGLVLPFVIAAVAIQGAVPPGDVQNVVVATLLAV
                     ILVGSFRAARAKPALRVVAVVFGVAAIAVAVLRALGVAIGEGEARLMSAAVAALAPPA
                     VALGVIRNLRERGRVGVDAVAGVITLYMLLGMMWAFVYGAIAELSGEFFAQDVTATVS
                     RCLYFSFTTLTTVGYGDYTAKTDLGHTLAVFEALLGQIYLVTVVSLIVGNLGRARPNR
                     LAPGKEPL"
     gene            915..1328
                     /locus_tag="VFN38_06060"
     CDS             915..1328
                     /locus_tag="VFN38_06060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011360.1"
                     /translation="MNNHTGLILVRGARALTYLVYAFVLFSLVILVLGFFLLLFGANP
                     DAAFAEWAYRSLDRVMAPFRGLFESIDLSGNSVLDPSIIFAMIVYGIVGLALSALIDW
                     LTQKMLMMRSKEALEAARQEEAARQEELRRHTAAV"
     gene            1330..2118
                     /locus_tag="VFN38_06065"
     CDS             1330..2118
                     /locus_tag="VFN38_06065"
                     /inference="COORDINATES: protein motif:HMM:NF024874.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HET9011361.1"
                     /translation="MDRLTYVGHATVLVELAGVRVLTDPLLRHRLGHVTRRVPLPDLG
                     TLRDLDAILISHAHADHLDIGSLRRLEHAGPVIVPRGCARLLRRARVGELIELDVGDR
                     RRVGALEVEAVDAVHDGRRHPLGRDIPTLGFLIGDSVLFAGDTDLHDGMAALRGRVDV
                     ALLPVWGWGPRLPAGHLGPETAARAVEHIQPRIAIPIHWGTMRSPGERTLHDPRAPAT
                     AFAAAVAQLELPTRVEILDPGEGLVLGEGEASPESGDAPGTARA"
BASE COUNT          285 a          809 c          829 g          359 t
ORIGIN      
        1 ggggttcgac cggagcattc acttcggcgg gcacgcggcc aagggcgtca accatccgat
       61 gcgtcgggga gcgtgcacca ccccgccgag ggggtgtcca cgcgcggcgt gcgtgcctcc
      121 caccccggac gggggcgcgc acccttgccg tgcgcgggcc gctgaagttc gatccggcaa
      181 tgaccacgcg tcccgtgacg ccgcgcccgc gagccacggc ccgagttggg tagcgcggtg
      241 cccgagggcc tgaaggagtg gtcgcacaac ggattggtgc tgccgttcgt gatcgcggcc
      301 gtcgccatcc agggagccgt cccgccgggc gacgtgcaga acgtggtcgt cgccacgctg
      361 ctggccgtga tcctcgtcgg gtcgtttcgc gccgcccggg cgaagcccgc gctgcgtgtc
      421 gtcgccgtgg tcttcggcgt ggcggccatc gcggtggcgg tgctgcgggc gctcggggtc
      481 gcgatcggcg agggggaggc ccggttgatg agcgccgcgg tcgcggcgct cgcgcccccg
      541 gccgtggccc tcggcgtgat ccgcaacctg cgcgaacggg gtcgcgtcgg cgtcgacgcg
      601 gtcgccgggg tgatcacgct ctacatgctg ctggggatga tgtgggcgtt cgtgtatggc
      661 gcgatcgccg agctcagcgg cgagttcttc gcccaggacg tcacggcgac cgtctcccgt
      721 tgcctgtact tcagcttcac cacgctcacg accgtcggct acggcgacta caccgccaag
      781 accgacctgg ggcacaccct cgccgtcttc gaggcgctgc tgggccagat ctacctggtg
      841 accgtcgtct cgctgatcgt cggcaatctc gggcgggcgc gcccaaaccg gctcgcgccc
      901 ggaaaggagc cgctatgaac aaccacaccg gtctcatcct cgtccggggc gctcgcgcgc
      961 tcacctacct cgtctacgcg ttcgtgctgt tctcgctcgt gatcctcgtg ctcggcttct
     1021 tcctgctgct gttcggggcc aaccccgacg cggcgttcgc cgagtgggcg taccgcagcc
     1081 tggaccgcgt gatggcaccg ttccgcggcc tgttcgagtc gatcgatctg agcgggaact
     1141 cggtgctgga cccgtcgatc atcttcgcga tgatcgtgta cgggatcgtc ggtctcgcgt
     1201 tgagcgcgct gatcgactgg ctgacgcaga agatgctgat gatgcggtcc aaagaggcgc
     1261 tcgaggccgc gcgccaggag gaagcggcgc gtcaggagga gctgcggcgg cacactgccg
     1321 cggtgtgatg tggatcggct gacgtacgtc gggcacgcaa cggtgctcgt cgagctcgcc
     1381 ggcgtgcgcg tgctcaccga cccgctgctg cgccaccggc tcgggcacgt cacccggcgc
     1441 gtcccgctgc ccgacctggg cacgctgcgc gatctcgacg cgatcctgat ctcgcacgcg
     1501 cacgccgacc acctcgacat cggctcgctg cgcagactcg agcacgcggg ccccgtgatc
     1561 gtcccccgcg ggtgcgcgcg gctgctgcgg cgcgcgcggg tgggcgagct gatcgagctc
     1621 gacgtgggcg atcgccggcg cgtcggcgcg ctggaggtcg aggccgtgga cgccgtgcac
     1681 gacggccgcc ggcatccgct cgggcgcgac atcccgacgc tcggcttcct gatcggcgac
     1741 agcgtcctct tcgccggtga cacggacctc cacgacggga tggcggcgtt gcgcggacgc
     1801 gtcgacgtcg ccctgctgcc cgtgtggggc tggggtccgc ggctgcccgc cgggcatctc
     1861 gggcccgaga ccgccgcgcg cgcggtcgag cacatccagc cgcggatcgc gatcccgatc
     1921 cactggggga cgatgcgctc gcccggcgag cgcacgctgc acgatccgcg ggcgccggcg
     1981 acggccttcg cggccgccgt cgcgcagctc gaactcccca cccgggtcga gatcctcgac
     2041 cccggcgaag ggctcgtcct gggagagggt gaggcttcac ccgaatcagg cgatgcgccc
     2101 ggtacggccc gtgcctagcg tcaagacatg gagcgacagg atcacaccca tcacgcgccc
     2161 gtgatcgcgg cgttctcgcc tgagacgggc gcgcgtgagc cggtcgagtt cggcgtggcg
     2221 gccagccgca tcacgggcgc accgctgatc atcgtcgtcg tggcggatac gggatcggtg
     2281 cg
//
LOCUS       DASSYW010000379         2485 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1659298, whole genome shotgun sequence.
ACCESSION   DASSYW010000379 DASSYW010000000
VERSION     DASSYW010000379.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2485)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2485)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2485
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1659298"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..509)
                     /locus_tag="VFN38_06070"
     CDS             complement(<1..509)
                     /locus_tag="VFN38_06070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HET9011362.1"
                     /translation="MTAPNNRERILPRLIDDEIRESFINYSMSVIVSRALPDVRDGLK
                     PVHRRVLYAMNELGLVPGRPYKKCATVVGDVLGKYHPHGDQSVYDALVRMVQDFSLRY
                     PLVDGQGNFGSVEGDPAAAYRYTEAKLSPIAMELLSDIDKNTVDFGPNFDDRLEEPLV
                     LPSGIPNLVV"
     gene            complement(624..1337)
                     /locus_tag="VFN38_06075"
     CDS             complement(624..1337)
                     /locus_tag="VFN38_06075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011363.1"
                     /translation="MKPYERLGEARTPNGTVLALYRHDGAYLIRADGVELMSTRRHLS
                     EDRLAEVACAPIREVPRARVLIGGLGLGFTLRAALRQLGEDAEVVVAELVPEVIAWNA
                     DPRHDLSAEAMRDRRVRVIEGDVSEVLRANPGGFDAIMLDTDNGPDGMLMSENARLYA
                     TAGIGATVAALRAGGSVVYWSVGDDPKFAGALRGAGLEVSTLRVRAHDTAGPMHTLYV
                     ATPRARRPRPSETSAGDHA"
     gene            complement(1466..1912)
                     /locus_tag="VFN38_06080"
     CDS             complement(1466..1912)
                     /locus_tag="VFN38_06080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011364.1"
                     /translation="MPNVLRNVIAVVAGIAIGGGVNMALIMLGSSLIPPPAGVDVNSA
                     ESLSRSMHLFEPRHFVTPFLAHAVGTLAGALAAYLIAATYRVRIAYVIGAVFFCAGVS
                     ASFMIPAPVWFIALDLLAAYLPMAWLGVQVGSRITQGDVGARRQLA"
     gene            complement(1956..2144)
                     /locus_tag="VFN38_06085"
     CDS             complement(1956..2144)
                     /locus_tag="VFN38_06085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011365.1"
                     /translation="MHDGADRSIEVPWEAAGNREFLATMQQKLPGFDDTAVIQSSGMV
                     HGFRQVWPAEVPPLFHPS"
     gene            complement(2246..>2485)
                     /locus_tag="VFN38_06090"
     CDS             complement(2246..>2485)
                     /locus_tag="VFN38_06090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011366.1"
                     /translation="GEILATARAYDARVEIIADVAHNMMLELRWQAVAARILMWLEEW
                     ELTRRPASAEGEAPASAMGVTASSLPHERFSQEAR"
BASE COUNT          402 a          877 c          847 g          359 t
ORIGIN      
        1 acgacgagat tcggaatccc cgaaggcaga acgagcggct cctcgaggcg atcgtcgaag
       61 ttggggccga agtcgacggt gttcttgtcg atgtccgaga gcagctccat cgcgatgggc
      121 gagagcttgg cctcggtgta gcggtaggcc gccgccggat cgccctcgac ggagccgaag
      181 ttcccctgcc cgtccaccag cggatagcgc agcgagaagt cctgcaccat gcggacgagc
      241 gcgtcgtaca cgctctggtc gccgtgcgga tggtacttgc cgagcacgtc gccgacgacg
      301 gtcgcgcact tcttgtacgg acggcccggc acgagcccga gctcgttcat ggcgtagagc
      361 actcgccggt gcaccggctt gagcccgtcg cgcacatcgg gcagcgcgcg cgacacgatg
      421 acgctcatcg agtagttgat gaacgactcg cggatctcgt cgtcgatgag gcgcggaagg
      481 atgcgttcgc ggttgttcgg agcagtcatg acgcggtgtt attcggggcg cgaaacggag
      541 gagctacaga ctctgcaatc tagccgaaca acctccgaat agcaacctcg taccaccacc
      601 gcaacccgtt gccgcgcaac gtcttaggcg tgatcgcccg cagacgtttc cgaggggcgc
      661 ggccgccggg cccgcggcgt cgccacgtag agggtgtgca tcggacccgc cgtgtcgtgg
      721 gcccggacgc ggagcgtgct cacctcgagc cccgcgccgc gcagcgcgcc cgcgaacttc
      781 gggtcgtcac ccacggacca gtacaccacc gacccgcccg cgcgcagcgc ggccacggtg
      841 gccccgatgc cggcggtcgc gtagagtcgc gcgttctcgg acatcagcat tccgtcgggg
      901 ccgttgtcgg tgtcgagcat gatcgcatcg aagccgccgg gattcgcccg gagcacctcg
      961 ctcacgtcgc cctcgatcac acggacgcgc cggtcgcgca tcgcctccgc cgacaggtcg
     1021 tggcgcgggt cggcgttcca ggcgatcacc tcgggcacga gctccgcgac caccacctcg
     1081 gcgtcctcgc ccagctgacg gagggcggcc cggagcgtga accccagccc cagcccgccg
     1141 atgagcaccc gcgcccgcgg cacctcccgg atcggcgcgc aggccacttc ggccagccga
     1201 tcctcggaga gatgccggcg ggtggacatg agctccacgc cgtcggcgcg gatgaggtac
     1261 gcgccgtcgt gacggtacag cgcgagcacc gtcccgttcg gcgtgcgcgc ctccccgagc
     1321 cgctcgtagg gcttcacggc gccagcggcg gcgggtgggc ggggcgcgac gccctgccga
     1381 ccgccgcccc gcgcgcggcc acgatgacag tgttcatcat cgaacaatat cggagcgcgg
     1441 gcggggagga tacgcccgcg cggtctcagg ccagctgccg ccgtgcgccg acgtcgccct
     1501 gcgtgatgcg ggaccccacc tggacgccca gccacgccat cgggaggtag gcggccagca
     1561 ggtcgagcgc gatgaaccag acgggcgcgg ggatcatgaa gctcgccgac acgccggcgc
     1621 agaagaacac cgcgccgatc acgtacgcga tcctcaccct gtaggtcgcc gcgatcaggt
     1681 acgccgcgag cgcccccgcg agggtgccca cggcgtgggc caggaacggc gtcacgaagt
     1741 ggcgcggctc gaacaggtgc atggacctgc tcaggctctc ggcgctgttc acgtccactc
     1801 ccgcgggagg agggatgagc gacgagccga gcatgatgag cgccatgttg acgcctccgc
     1861 cgatggcgat tccggcaacg acggcgatca cgttgcgcag gacgttgggc atggaagatc
     1921 ctcgtgaggc gcggttggcc ccaatgtgcg ggtgatcagc tcggatggaa tagcggagga
     1981 acctccgcgg gccagacctg cctgaagccg tgcaccatgc cggacgactg gatcaccgcc
     2041 gtgtcgtcga agcccggcag cttctgctgc atcgtcgcca ggaactcgcg attgcccgcg
     2101 gcctcccacg gcacctcgat cgaccggtcc gcgccgtcgt gcaccaggta gctgattccc
     2161 ccgacgggcc atcgcgcccc cgagtcgcgg aagttccgac ttcagacgca ggcacgatac
     2221 aaccgttgct gccaggccgc acccctcagc gtgcttcctg gctgaagcgc tcgtgaggca
     2281 gcgacgatgc ggtgactccc atggcgctcg ccggtgcctc gccttcggcg gaagctggac
     2341 gtcgcgtcag ctcccattcc tcgagccaca tgaggattcg cgcggcgacg gcctgccatc
     2401 gcagctcgag catcatgttg tgcgccacat cagcgatgat ctccacccgg gcatcgtagg
     2461 cccgcgcggt ggcgaggatc tcgcc
//
LOCUS       DASSYW010000380         2079 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_910848, whole genome shotgun sequence.
ACCESSION   DASSYW010000380 DASSYW010000000
VERSION     DASSYW010000380.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2079)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2079)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2079
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_910848"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1795
                     /locus_tag="VFN38_06095"
     CDS             <1..1795
                     /locus_tag="VFN38_06095"
                     /inference="COORDINATES: protein motif:HMM:NF014516.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HET9011367.1"
                     /translation="LPLDAVRETADAVSSGELVADVDAAAPAQAWVRALLGHVHALDD
                     GAAFVDARGAVWLPGATGGPGPLRRRAELFALRAELSASESARQAASEAADAARSTLT
                     LANERVSAAADDAATLQQEWRRAGEHRAELARRLQRAEREVSDAAALAGRLLARADEL
                     RERIATIDASVSELSALIAQQDAAAAEARARLMEAEHAQEEAREQRTAGQIAEAQAHA
                     RLQVASDRERRLGEEFTSASTRLASLEQELSTLADADRSLAEQMAGWQMDLDERDATL
                     RDTEDRLGAAEEAVRVADEALTEAEHTLDDVRRVAHQMAEELHHAELRFTELAGRRTA
                     IRERLETEWRKPLDDLLQTFTPVEVDDETLRAEVEQLRSQLESLGIVNPLAIEEHEEE
                     TKRLDFLTSQRADLADAKNSLALAIREIDATARELFLATFTQVRENFRQIFMTLFGGG
                     ECDLRLENPDAPLVCDIEVHASPRGKRTQRIHLLSSGERALVALSLLFGIFLTKPSPF
                     CLLDEVDAPLDDANIGRFVRMLIQFKSKTQFIVITHNPRTTTEAADAVYGVTMQEPGV
                     SSIVSVRMRGAAVEDIAELIGEEPEPAAAPA"
     gene            1792..>2079
                     /locus_tag="VFN38_06100"
     CDS             1792..>2079
                     /locus_tag="VFN38_06100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011368.1"
                     /translation="MTRSRRLALVTLMGLAAATAAAMPFQRGTVPVAKGVAADTGRPA
                     ITILYQNFPNPFPTTSSRVTCIWFDLNRTTSVSLTVHDVRGNLVRRILPNAA"
BASE COUNT          338 a          719 c          732 g          290 t
ORIGIN      
        1 cctgccactc gacgccgtac gcgaaaccgc cgacgccgtg tcgagcggcg agttggtagc
       61 cgacgtcgat gccgccgctc cggcgcaggc gtgggtgcgt gcgttgctgg gccacgtgca
      121 cgcgttggat gacggcgccg ccttcgtcga tgcgcgcggg gcggtctggc tccctggtgc
      181 cacgggcggg cctggtcccc tgcgtcgtcg cgcggagctg ttcgcgttgc gcgcggagtt
      241 gagtgcgagc gaatccgcgc gccaggcagc gtcggaggca gcagacgcgg cgcgcagcac
      301 gctcactctg gccaacgagc gcgtgtcggc ggcggctgac gatgccgcga cgttgcagca
      361 ggagtggcgc cgcgccggcg agcaccgtgc cgagctggct cgccggctac agcgagcgga
      421 acgtgaggtt tccgacgcgg ccgcgctcgc tggacgactg ctcgcgcgag ccgacgagct
      481 tcgcgagcgc atcgcaacca tcgacgcgtc ggtgagcgag ctgtccgcgc tcatcgccca
      541 gcaggacgcc gccgccgctg aagcgcgcgc gcggctcatg gaggcagagc acgcacagga
      601 agaggcccgc gagcagcgca cggccgggca gattgccgag gcgcaggctc acgcgcggct
      661 gcaggtcgcg tccgaccgcg aacgccgact cggcgaggag ttcacctccg cctcgacgcg
      721 cctggcgtcg ctcgagcagg agctcagcac gctcgccgat gcagaccgat cgctggccga
      781 gcagatggcc ggctggcaga tggatctgga cgagcgggac gcgaccctac gggacaccga
      841 agaccggctg ggggccgccg aggaggcggt ccgcgtcgcg gacgaggcgc tcacggaagc
      901 cgagcacacg ctggacgacg ttaggcgcgt ggcccaccag atggccgagg agctgcatca
      961 cgccgagctg cgcttcaccg agctcgccgg ccgccgcacc gcgatccgcg agcgactcga
     1021 gaccgaatgg cgcaagccac tcgacgacct gctccagacg ttcacgccgg tcgaggtgga
     1081 cgacgagacg ctgcgcgcgg aggtcgagca gctccggtcc cagctcgaat cgttaggtat
     1141 cgtgaaccca ctcgccatcg aggagcacga ggaggagacc aagcgtctcg acttcctcac
     1201 gtcgcagcgc gcggacctgg ccgacgcgaa gaactccctg gcattggcga tccgtgagat
     1261 cgacgcaaca gcgcgcgagc tgttcctcgc gacgttcacg caggtgcgcg agaactttcg
     1321 ccagatcttc atgacgctgt tcggcggcgg cgaatgcgac ctgcggctcg agaatccgga
     1381 cgccccgctg gtctgcgaca tcgaagtcca tgcgtcgccg cgcggaaagc ggacgcagcg
     1441 cattcacctc ctctcgagcg gcgagcgagc cctggtcgcg ctgtcgctgc tcttcggcat
     1501 cttcctcacg aagccgagcc cgttctgtct gctcgacgag gtcgacgcgc ctctcgacga
     1561 cgcaaacatc gggcgcttcg tgcgcatgct gatccagttc aagagcaaga cccagttcat
     1621 cgtgatcacg cacaacccgc gcaccaccac ggaagccgcc gacgcggtgt acggcgtgac
     1681 gatgcaggag ccgggcgtct catcgatcgt cagcgtgcgg atgcgcggcg cggcggtcga
     1741 ggacatcgcc gagctgatcg gcgaagagcc ggaaccggcg gcggcaccgg cgtgactcgg
     1801 tcgcgccggc tcgctctcgt gacgctgatg gggctcgccg cggccacggc cgcggcgatg
     1861 ccgtttcagc gaggcacagt gcccgtcgcg aagggcgtgg cagcggacac cgggcggccg
     1921 gcgatcacca tcctgtatca gaattttccg aatcccttcc cgaccacgag ctcgcgggtc
     1981 acgtgcatct ggttcgacct gaaccggacg acgtccgtga gcctcacggt ccacgacgtg
     2041 cgcggcaacc tcgttcgacg cattctgcct aacgctgcg
//
LOCUS       DASSYW010000381         4059 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_853412, whole genome shotgun sequence.
ACCESSION   DASSYW010000381 DASSYW010000000
VERSION     DASSYW010000381.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4059
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_853412"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..225)
                     /locus_tag="VFN38_06105"
     CDS             complement(<1..225)
                     /locus_tag="VFN38_06105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011369.1"
                     /translation="MRSIAGSRFFVSVLAAWSLSAACTTEKIVYREGTNFAAPPASAA
                     NFIGYYDAANKRTVCGSCHVDAQTRWASTKH"
     gene            complement(372..3164)
                     /locus_tag="VFN38_06110"
     CDS             complement(372..3164)
                     /locus_tag="VFN38_06110"
                     /inference="COORDINATES: protein motif:HMM:NF024893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA-like C-terminal region-containing protein"
                     /protein_id="HET9011370.1"
                     /translation="MRFPRKLALGLAALVTTLLVALLVVPFLFRDRIAARLKSEVNAS
                     VNARVAWSGASLGLLRDFPNVTLGLDRFSVVGVEPFAGDTLVSMRQARLVLDLGSVVG
                     YLRTGAPIVVREIVLGRPVVRLRVLPDGRSNWDIARARAAATPGEGKAVGVTLRALRI
                     TDGSVTFDDQQSHLVASVEGLQESLRGDFAQQRFVLTTRTRADSVSLRFAGIPYLNRV
                     GVELNADVDADLAAHRFSFRNDSLRLNQLVLAFAGSVTTGKPDMILDVTFATPSTKFA
                     DILSLVPVIYARDFEKLQTAGTMSTSGRVHGSYGPHAFPALALRARVENGAFRYPSLP
                     LPAREIFLDLAIDNPGGHVDSTVVNLKRFHAAIGGRPLDARLTMRTPVSDPDVDLRLV
                     GSVDLADVGKTVKLESVKELAGTVAADIAMRARLSDVDAGRYDKVAAAGTVNAAHVAL
                     RSATIPHPIAVDTMALRFTPRTTELTSLAARIGHSDVRAVGSLDNLLGFALRDQDLRG
                     SATVNSDHFDLNEWRSNEKTTEVIPVPPHVDFALKASAAKVTYAALTAANVQGDLRVK
                     DQRVTLNELRMETLRGSVIANGYYETSVPGRPTFDFDLRLAAVDIPSAFTALTTVQKL
                     APIARWAQGGLSGTIGLKGPLGTDMTPVFTALTGKGAIETDRLVVQGAPLLDKLADAV
                     KLDQLRKPSLGVVKASFDVADGRVSVKPFVVQVGGIGMTVAGSNGIDQSLKYDLSLAV
                     PRTALGAAGTGMVTKLASQAGKAGELGAGDAVQLGAQVTGTVTNPSVKPSFAGMSASV
                     RDAAASAVRQEVATRTAAVKQKADSAAEQARARARAEAERLVSEAERQAAAIRADART
                     LAEKARTEGRARADSLMARATNPAARMAAQVGTDRIRREADQQADRIVREADARADAL
                     VAQAKRQADALTAAKG"
     gene            3318..>4059
                     /locus_tag="VFN38_06115"
     CDS             3318..>4059
                     /locus_tag="VFN38_06115"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016208 - AMP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HET9011371.1"
                     /translation="MPGILLATHGGESADGAVRVAASLATRLGAALTAVCVVEPRATI
                     DAGVGVPYMGIPDDAGEIERELLDATNTQLTRFGIATPVRLLLGSAATEIAATARTMN
                     AELIVLGLGPHGLLDRALGHETALQLVQTAATPVLAVPAHATTAPRHVLAAVDFSPTS
                     LLSVRTVARWLGAGDTLHLVHVVQPPRDADRARADETSVSASLATALNAIVLDLALHS
                     GVTVRTTVAVEEPAQLLIDLAEQEDADLI"
BASE COUNT          585 a         1418 c         1462 g          594 t
ORIGIN      
        1 gtgcttcgtg gacgcccagc gcgtctgcgc gtcgacatgg cacgagccgc acacggtgcg
       61 cttgttggcc gcgtcgtagt agccgatgaa gttcgcggcg ctcgcgggcg gcgcggcgaa
      121 gttcgtccct tcgcggtaca cgatcttctc cgtcgtgcag gcggcggaga gcgaccacgc
      181 ggcgagcacg gaaacgaaaa aacgactgcc ggcgatggac ctcatgatgc ccgtctccct
      241 tgggggagct gccgagaccg tcttgtcgcc accaggctac gctgcctgga ttcaaatgca
      301 tgtcgggaat aaccctgaac ttcgccggga aatacggcaa gcgagctgaa gaggaacggg
      361 tccgctcctc gtcagccctt cgccgccgtc agcgcgtccg cctgtcgctt cgcctgcgcg
      421 acgagcgcgt cggcgcgcgc atccgcctca cgcacgatcc gatcggcctg ctggtcggct
      481 tcgcggcgga tgcggtcggt gcccacctgg gcggccatcc gcgcggcggg gttggtcgcg
      541 cgcgccatca gggagtcggc gcgcgcacgt ccctcggtgc gcgccttttc cgcgagggtg
      601 cgggcgtcgg cgcgaatggc tgccgcctgg cgctcggctt cgctcacgag ccgctccgcc
      661 tcggcgcgcg cgcgcgcgcg cgcctgctcg gccgcggagt cggccttctg cttcacggcg
      721 gccgtgcgcg tggcgacctc ctgccgcacg gcgctcgcgg ccgcgtcgcg gacggaggcg
      781 gacattccgg cgaagctggg cttcaccgac ggattggtga cggtgcccgt cacctgcgcg
      841 cccagctgca cggcgtcacc cgcgcccagc tcgcccgcct tgcccgcctg cgacgcgagc
      901 ttcgtcacca tcccggtgcc ggcggcgcca agggcggtgc gcggcaccgc gagcgagagg
      961 tcgtacttca gcgactggtc gattccgttg gagccggcga cggtcatgcc gatgccgccc
     1021 acctggacca cgaagggctt cacgctgacg cggccgtcgg cgacgtcgaa cgaggccttc
     1081 accacgccga gcgacggctt gcggagctga tcgagcttca ccgcgtccgc cagcttgtcg
     1141 agcaatggcg cgccctgcac gacgagccga tcggtctcga tcgccccctt gcccgtgagc
     1201 gccgtgaaca ccggcgtcat gtccgtgccg agcggcccct tgagaccgat cgtgccggag
     1261 aggccaccct gcgcccagcg cgcgatgggt gcgagcttct gtacggtggt gagcgccgtg
     1321 aacgccgacg gaatgtccac ggcggcgagg cgaagatcga agtcgaaggt gggccggccg
     1381 gggacgctcg tctcgtagta gccgttggcg atcacggagc cgcgcagcgt ctccatccgc
     1441 agctcgttga gcgtgacgcg ctggtccttc acgcgcaggt cgccctgcac gttggccgcg
     1501 gtcagcgcgg cgtaggtgac cttggccgcc gaggccttca acgcgaagtc gacgtgcggg
     1561 ggaacgggga tgacctccgt cgtcttctcg ttcgagcgcc actcgttcag gtcgaagtgg
     1621 tcgctgttca ccgtggcgct gccgcgcagg tcctggtcgc gcagggcgaa cccgagcagg
     1681 ttgtcgagcg accccacggc gcgcacgtcg ctgtgcccga tccgcgccgc gagcgacgtc
     1741 agctcggtcg tcctcggcgt gaagcgaagc gccatggtat cgacggcaat cggatggggg
     1801 atggtggccg agcgcagcgc gacgtgcgcc gcgttcaccg tgccggcggc ggccaccttg
     1861 tcgtagcggc cggcgtcgac gtcggagagc cgcgcgcgca tcgcgatgtc ggcggcgacg
     1921 gtgcccgcga gctccttcac gctctcgagc ttcaccgtct tgccgacgtc ggcgaggtcc
     1981 accgagccga cgagtcggag atccacgtcg ggatcgctca ccggcgtgcg catcgtgagg
     2041 cgcgcgtcga gcgggcggcc gccgatcgcg gcgtggaagc gcttgaggtt caccaccgtg
     2101 ctgtccacgt ggccgcccgg attgtcgatc gcgagatcca gaaagatctc gcgcgccggc
     2161 agcgggagcg acggatagcg gaatgcgccg ttctccacgc gagcgcggag cgcgagggcc
     2221 ggaaaggcgt gcggcccgta gctgccgtgc acccggcccg aggtcgacat cgtgcccgcc
     2281 gtctgcagct tctcgaagtc ccgcgcgtag atgaccggca ccagcgaaag gatgtcggcg
     2341 aacttcgtgc tcggcgtcgc gaaggtgacg tcgaggatca tgtccggctt gcccgtcgtc
     2401 acggagcccg caaaggcgag cacgagctgg ttgaggcgga gcgagtcgtt cctgaagctg
     2461 aaccggtgcg ccgcgaggtc ggcatccacg tcggcgttca gctcgactcc cacgcggttg
     2521 agatagggaa tgccggcgaa gcgcagcgag acgctatccg cgcgcgtgcg ggtggtgagc
     2581 acgaagcgct gctgcgcgaa atcgccgcgc agcgactcct gcaacccttc gaccgacgcc
     2641 acgagatgcg actgctggtc gtcgaacgtg acgctgccgt cggtgatgcg cagcgcgcgc
     2701 agcgtgacgc caaccgcttt cccctcgccg ggcgtcgcgg cggccctggc acgggcgatg
     2761 tcccagttcg atcgcccatc cggcagcacg cgcagccgga ccacgggacg cccgagcacg
     2821 atctcacgga ccacgatcgg ggcgccggtt ctcaggtatc ccaccacgct gcccaggtcg
     2881 agcacgaggc gcgcctgccg catcgatacc agggtgtccc cggcgaacgg ctccacgccg
     2941 acgacggaga accggtcgag cccgagcgtg acgttcggga aatcgcggag cagtccgagg
     3001 ctcgcgccgc tccacgccac tctcgcgttc accgaggcat tgacctcgga cttcagccgc
     3061 gcggcgatcc gatcgcggaa gaggaacgga acgacgagga gcgcgacgag cagggtcgtg
     3121 acgagcgcgg cgaggccgag cgcgagcttg cgggggaatc gcatgggacg gggcagggga
     3181 gcgagccgac atgggcgtcg gcgtctgcct gttggacgat tcgggcgcgc ctcgcgtctc
     3241 gtcctggcgt cagggaaagt gggacagctt cgcgccgcgc cggggataca ctggagtcac
     3301 gaccaacgga gcgtcccatg cctggaatcc tgctcgctac gcacggcgga gagtcggcgg
     3361 acggcgccgt gcgcgtcgcc gccagcctgg ccacgcggct cggcgccgcc ctgacggcgg
     3421 tctgcgtggt cgagccgcgc gcgacgatcg acgccggtgt gggagttccc tacatgggca
     3481 ttccggacga cgccggggag atcgagcgcg agctcctcga cgcgacgaac acgcagctca
     3541 cccgcttcgg catcgccaca ccggtgcgcc tgctgctggg ctccgcggcg acggagatcg
     3601 ccgcgacggc gcgcaccatg aatgcggagc tgatcgtgct cggcctcggg ccgcacgggc
     3661 tgctcgatcg ggcgctcggt cacgagaccg cgctgcagct cgtgcagacc gccgccacgc
     3721 cggtgctggc ggttccggcg cacgccacca ccgcgcccag gcatgtgctg gccgcggtcg
     3781 acttttcgcc gacgagcctc ctgagcgttc gcacggtcgc gcggtggctc ggcgccggcg
     3841 acacgctgca cctggtgcac gtggttcagc cgccgcggga tgcggaccgc gcgcgcgccg
     3901 acgagacgag cgtctccgcg tcgctcgcga cggccctcaa cgcgatcgtg ctcgatctcg
     3961 cactccacag cggggtcacg gtgcgcacca ccgtcgccgt cgaggaaccg gcccagctcc
     4021 tgatcgacct cgccgagcag gaggatgcgg acctgatcg
//
LOCUS       DASSYW010000382         2170 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1751364, whole genome shotgun sequence.
ACCESSION   DASSYW010000382 DASSYW010000000
VERSION     DASSYW010000382.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2170)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2170)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2170
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1751364"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..878)
                     /locus_tag="VFN38_06120"
     CDS             complement(<1..878)
                     /locus_tag="VFN38_06120"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR01205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008716 - D-alanine-D-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HET9011372.1"
                     /translation="MRVIVLLGGNSPERDVSLVSGRAVGTALMRRGHRVTAVDTAGGR
                     LVELDAKRGIGSEPPTTALVPEGDAVRAVEKLGAQAFGEVDVVFIALHGTGGEDGTIQ
                     AMLDAVGIPYTGSGVLGSSVAMDKEVAKRIFRDIGVPTPRGFAAATDTPQAELVRRIA
                     AECGWPAVVKPNAQGSSVGVSIVTGPAELAPAVESAGAYDTRLLFETFIPGREMTVAI
                     LDGRALPVVEIVPHAGFYDYRNKYTAGSSSYHVPADIPADVARTLQRHAEACFAALRC
                     RDFARIDFRLSPANEP"
     gene            complement(962..>2170)
                     /gene="gltX"
                     /locus_tag="VFN38_06125"
     CDS             complement(962..>2170)
                     /gene="gltX"
                     /locus_tag="VFN38_06125"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: protein motif:HMM:TIGR00464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009332 - glutamate-tRNA ligase complex
                     [Evidence IEA];
                     GO_function: GO:0004818 - glutamate-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HET9011373.1"
                     /translation="LHWDEGPDVGGPYAPYRQSERRALYAAAGTRLLEAGKAYPCFCG
                     AGDPEAKSDCRCDDLAPKAAQARVQGGEAHAIRFRVPPGMVEFDDRLRGAMRIDAGTF
                     GDFVLLRSNGLPTYNFACVVDDAAMRITHVVRGEDHLYNTARQRLLYDALAAPLPEFV
                     HLALILDEDRGKLSKRAGRTGTYVDEYRTRGYLPEALMNFLALLGWSSAQGEELFTPA
                     ELVRQFDLDRISHSPAIFDPVKFEWMAAWHVRQRPDDELARLAAPWLRDAGLDPSPDR
                     ARAWIAGFKADLPALALLPERIQRLLGPPAPTPEAAATLASPEARRLLQVLDDKIEQA
                     QGAATPLAGAGFKQLLQECGRELGLRGRDLFVPVRVALSGTDHGPELPLLFDALGVES
                     VRQRLRAAIG"
BASE COUNT          333 a          795 c          739 g          303 t
ORIGIN      
        1 tagggctcgt tggcgggact cagtcgaaaa tcgatgcgcg cgaaatcgcg gcagcgcagc
       61 gccgcgaagc aggcctccgc atgccgttgc agtgtccgcg ccacgtcggc gggaatgtcc
      121 gccggcacgt ggtagctgct cgagccggca gtgtacttgt tgcggtaatc gtagaagccg
      181 gcatgcggca cgatctcgac gaccggcagc gcccggccgt ccagaatggc gacggtcatc
      241 tcacgtcccg ggatgaaggt ctcgaagagc agccgcgtgt cgtaggcgcc cgcgctttcg
      301 acggcaggag ccagctccgc cggcccggtc acgatggaaa caccgacgct cgatccctgc
      361 gcgttgggct tcaccaccgc gggccagccg cactcggccg cgatgcgccg gacgagctct
      421 gcctgcggtg tgtccgtcgc tgccgcgaag ccgcgcggtg tcggcacgcc gatgtcgcgg
      481 aagatgcgct tcgccacttc cttgtccatg gcgacgctgc tccccagcac acccgagccg
      541 gtgtagggga tgccgaccgc gtccaacatc gcctggatgg tgccgtcctc gccgccggtg
      601 ccgtgcaacg cgatgaagac gacgtccacc tcgccgaacg cctgggcgcc gagcttctcg
      661 accgcacgca cggcgtcgcc ctcgggcacg agcgccgtcg tcggcggctc gctgccgatg
      721 ccgcgtttgg catccagctc gaccagccgg cctccggccg tgtcgacggc cgtcacccgg
      781 tgtccgcgcc gcatgagcgc cgtccctacc gcacgtcccg acacgagcga cacgtcgcgc
      841 tcgggcgagt tccctcccaa caacacgatg acgcgcatgg ctccctttcc cctcttcccg
      901 acatccatcc ccggcgccgg atgcgccagc cccgaggagc gtacacgacg aaacggcgag
      961 atcaaccaat tgccgcgcgc aggcgctgtc gcaccgactc gaccccgagc gcatcgaaga
     1021 ggagcggcag ctcgggaccg tggtccgtgc cggagagcgc cacgcgcacc gggacgaaga
     1081 gatcccgacc gcgcagcccg agctcccgac cgcactcctg cagcagctgc ttgaacccgg
     1141 cacccgcgag cggcgttgcc gcgccctgcg cctgctcgat cttgtcgtcc agaacctgca
     1201 gcaaacgacg tgcctcgggg ctcgcgagcg tcgctgcggc ctctggggtg ggtgccggcg
     1261 ggcccaggag ccgctggatc cgctccggca acagagcgag cgccgggaga tcggccttga
     1321 acccggcgat ccaggcgcgg gcgcgatccg ggctcgggtc gagccccgcg tcccgcagcc
     1381 acggcgccgc gagccgcgcg agctcgtcat cgggacgctg gcgcacgtgc cacgccgcca
     1441 tccactcgaa cttcaccggg tcgaagatgg cgggcgagtg cgagatgcgg tcgaggtcga
     1501 actggcgcac gagctccgct ggcgtgaaga gctcctcacc ctgcgccgac gaccagccga
     1561 ggagcgccag gaagttcatg agcgcctcgg gcaggtagcc gcgcgtgcgg tactcgtcga
     1621 cgtacgtgcc ggtgcggccg gcgcgcttgc tcagcttgcc gcggtcctcg tcgaggatga
     1681 gcgccaggtg cacgaactcg ggcaggggtg ctgcgagcgc gtcgtagaga agccgctggc
     1741 gcgccgtgtt gtagagatga tcctcgccac gcacgacgtg cgtgatccgc atcgccgcgt
     1801 cgtcgacgac gcaggcgaag ttgtaggtcg gcagcccatt ggagcggaga agcacgaagt
     1861 cgccgaacgt gcccgcatcg atgcgcatcg caccccgcag gcgatcgtcg aactccacca
     1921 tgccgggtgg gacgcggaag cggatggcgt gcgcctcgcc gccctgcaca cgcgcctgcg
     1981 ccgccttcgg cgcgagatcg tcacaccggc aatcgctctt cgcctccgga tccccggcgc
     2041 cgcagaagca cgggtacgct ttgccagcct ccaggagccg cgtcccggcc gcggcgtaga
     2101 gcgcgcgccg ctccgactgt cggtacggcg catacggtcc gccgacgtcc ggcccctcgt
     2161 cccaatggag
//
LOCUS       DASSYW010000383         2515 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_341198, whole genome shotgun sequence.
ACCESSION   DASSYW010000383 DASSYW010000000
VERSION     DASSYW010000383.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2515)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2515)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2515
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_341198"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..350)
                     /locus_tag="VFN38_06130"
     CDS             complement(<1..350)
                     /locus_tag="VFN38_06130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011374.1"
                     /translation="MLNVLLESRARRPRRVGSTLASAMVHAALIAGAVALTLPHRVDA
                     RPHADPPHGPVIFTVPPRPTPPTPSTGTRSASPIPVMGPTLKRIDIPMVVPDHLPPVD
                     VGPAIPPDQIIIGGP"
     gene            complement(544..744)
                     /locus_tag="VFN38_06135"
     CDS             complement(544..744)
                     /locus_tag="VFN38_06135"
                     /inference="COORDINATES: protein motif:HMM:NF017353.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsbD family protein"
                     /protein_id="HET9011375.1"
                     /translation="MADDLGTDGLENQVKGAAKEVAGKVQKNVGDLTDNHSQELKGAA
                     RELEGKGQRKVGETESKIDRNI"
     gene            962..1546
                     /locus_tag="VFN38_06140"
     CDS             962..1546
                     /locus_tag="VFN38_06140"
                     /inference="COORDINATES: protein motif:HMM:NF015513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HET9011376.1"
                     /translation="MFIHYGHCRPHGHRAKWGWDASFMNGIFGGEGRPRGRWRGGRMF
                     EQGDLRYVVLRLLEEKPRHGYEIIKALEERFGGTYAPSPGVVYPTLQLLEDLGYARIV
                     PGDEGKKTYEITDAGRAYLAENRDTVDSIFERISTLMGHFLDEPMTEVHRAFRKAGKA
                     TYGRATDAVQSPAVLKQIVDILERAAAEIDAIPR"
     gene            1659..>2515
                     /locus_tag="VFN38_06145"
     CDS             1659..>2515
                     /locus_tag="VFN38_06145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015079 - potassium ion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KUP/HAK/KT family potassium transporter"
                     /protein_id="HET9011377.1"
                     /translation="MSPLETGSFPIEPHAPARPEGKRLALLTLTALGVVYGDIGTSPL
                     YALRECFKAEYGIHPTTASVLGVLSLILWSLILVVSVKYIVFILRADNRGEGGILALL
                     ALLLQHKRRADDKRRRLTLIALGLFGAALLYGDGVITPAISVLGAVEGLEVGAPGLAR
                     IVVPITLLILFALFMVQRYGTARVGTAFGPTMLLWFFTIAALGVRSIASNPEVLAAIN
                     PWYALRFFFDHGMAGFLTLGAVVLCVTGGEALYADMGHFGKRPIRIAWFGVALPALLL
                     NYFGQGALLL"
BASE COUNT          366 a          862 c          858 g          429 t
ORIGIN      
        1 ggtccgccga tgatgatctg gtcgggcggg atggccggcc cgacgtcgac cggcggcagg
       61 tgatccggga cgaccatcgg gatgtcgatg cgcttcagcg tcggacccat cacgggaatg
      121 ggcgaggcgg aacgcgttcc cgtcgagggg gtgggaggcg tcggacgcgg gggaacggtg
      181 aagatcacgg ggccgtgcgg gggatccgcg tgggggcgtg cgtcgacccg atgcggcagg
      241 gtcagcgcga cggcgccggc gatgagcgcg gcgtgcacca tggcgctggc cagggtgctg
      301 ccgacccgac gagggcggcg tgcgcgagac tccagcagga cgttcagcat ggcgacctct
      361 cccgagtgag tgacgtggac gactcacggg tgaggatacg accaacggct taggccatcg
      421 tgacgcgcgg attattcgtc gctcacgact gcatgacgag atgctgagcc cgacatgacg
      481 aaacgatgaa gggcgccggc tcggaccggc gcccttcatc actgcgcgtc gcgtgggcga
      541 cggtcagatg ttgcgatcga tcttggactc ggtctcgccg accttgcgct gacccttccc
      601 ctcgagctcg cgcgccgcac ccttcagctc ctggctgtgg ttgtcggtga ggtcgccaac
      661 gttcttctgc accttgcccg cgacttcctt cgccgcgccc ttgacctggt tctccaggcc
      721 gtccgtgccg agatcgtccg ccatgatgat atgcctcgtt tggaagaagt tgacgttccg
      781 tgttgccctc tcctagggca atcgatgtgc ccggggcgtc tggcgagcgg aacgacaggc
      841 gcgcgacgcc gggccttgcg cgctcgccgg acggtgatgg cgggcggctc tggacaaagt
      901 tatatcgcaa gatatatctt ttcgttaaca cgtcgatcgc cgcgttgcgg cggagggcac
      961 catgttcatc cactacgggc actgccgtcc ccatggccac cgcgccaagt gggggtggga
     1021 cgccagcttc atgaacggca tcttcggagg agaggggcgg ccccgcggcc ggtggcgcgg
     1081 cggacggatg ttcgagcagg gcgacctccg gtacgtcgtc cttcgcctgc tggaggaaaa
     1141 gccccgccac ggctacgaga tcatcaaggc gctcgaggaa cgcttcggcg gcacctacgc
     1201 gccgagcccc ggcgtggtct accccaccct ccagctcctg gaagacctcg gctacgcccg
     1261 catcgtgccg ggcgacgaag ggaagaagac ctacgagatc accgacgcgg ggcgcgccta
     1321 cctggcggag aaccgggata ccgtggactc gatcttcgag cgcatcagca cgctcatggg
     1381 gcacttcctc gacgagccga tgaccgaggt gcaccgagcc ttccgcaagg ccggcaaggc
     1441 gacctacggc cgcgcgacgg acgccgtgca gagcccggcg gtgctcaagc agatcgtgga
     1501 catcctggaa cgggcggccg ccgagatcga cgcgattccg cgctgacgtc gtctgccgga
     1561 ttgcgggcga ccgcgtatgt tccaatcggg ccgggggcgt tcgcgtctcc ggcccgcgcc
     1621 gttcgccggc gccgcggtcc gccacccatc gcaccgagat gtctccgctc gaaaccggca
     1681 gctttccgat tgagccccac gcgcccgctc gcccggaggg caagcgcctc gccctgctca
     1741 ccctgaccgc gctgggcgtc gtctacggcg acatcggcac gagtccgctc tatgccctcc
     1801 gcgagtgctt caaggcggag tacgggatcc accccacgac cgccagcgtc ctcggggtgc
     1861 tgtcgctgat cctgtggtcg ctgatcctcg tggtcagcgt gaaatacatc gtcttcatcc
     1921 tgcgcgcgga caaccggggc gaggggggca tcctggccct cctcgccctt ctgctgcagc
     1981 acaagcggcg cgccgacgac aagcggcgcc gtctcaccct catcgcgctc ggcctgttcg
     2041 gggccgcgct gctctacggc gacggcgtga tcaccccggc catctccgtg ctgggcgcgg
     2101 tggaagggct cgaggtgggc gcgccgggcc tggcgcgcat cgtcgtcccg atcacgctgc
     2161 tcatcctgtt cgcgctgttc atggtgcagc gctacggcac ggcgcgtgtc ggcaccgcct
     2221 tcggtccgac gatgctgctc tggttcttca ccatcgccgc gcttggcgtg cgctccatcg
     2281 cgtcgaaccc ggaggtgctg gcggcgatca acccatggta cgccctgcgc ttcttcttcg
     2341 accacgggat ggcgggcttc ctcaccctcg gcgccgtcgt tctctgcgtc accggcggtg
     2401 aggcgctcta cgccgacatg gggcacttcg gcaaacgacc catccgcatc gcgtggttcg
     2461 gcgtcgccct ccccgccctg ctcctcaact acttcggcca gggggcgctg ctgct
//
LOCUS       DASSYW010000384         2116 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1657174, whole genome shotgun sequence.
ACCESSION   DASSYW010000384 DASSYW010000000
VERSION     DASSYW010000384.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2116)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2116)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2116
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1657174"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(91..1077)
                     /locus_tag="VFN38_06150"
     CDS             complement(91..1077)
                     /locus_tag="VFN38_06150"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HET9011378.1"
                     /translation="MGASPTAILEDLSALSDATRSRMLLLLERQELTVTELCAVLQLP
                     QSTVSRHLKTLSDASWAISRRDGTSRHYTLALDERGPAARRLWALLREQLSATPGADQ
                     DARRLKGVLARRQSKSAQFFDSAAGQWDKLRGELFGASSHLQALPALLDERWVVGDLG
                     CGTGQVASALAPFVARVIAVDRSGDMLQAARRRLRDAANVEVRRGELEALPIADAELD
                     AVTLLLVLHHLPDPAAALAETARVLRPGGRVLIADMLPHEHEEYRQQMGHVWLGFSEE
                     QLRRLLGAGFDRVRVVPMPPQPETKGPALFVATARRCDGGRSLANNQLPIPQ"
     gene            complement(1171..>2116)
                     /locus_tag="VFN38_06155"
     CDS             complement(1171..>2116)
                     /locus_tag="VFN38_06155"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HET9011379.1"
                     /translation="SFAKTEEVIDLTKVAAEFGGLYTSHVRDEGNYNIGIVASVLEVI
                     RIAEEGGLTGIVSHMKALGPDSWGLATAMTMRMEAARQRGVQVFADQYPYDASSTSLA
                     AALAPGGVKPTIEVIAENLRRRGGPASVQIAFHKADRALEGKTLEAIAKERGVSPEQA
                     AFDIIGSGGASIVSFNMSEEDIAHIMKKPYTMTSSDGALTAPGEGMPHPRNNGAFARK
                     LSRYVRDRRVVDLEMAVRSMTALPAAVFGMKDRGAIREGAAADVAIFDPARIRDRATY
                     ADPHQLAEGMDYVLVNGVLVVDQGAFTAARPGRVLRRQ"
BASE COUNT          321 a          764 c          683 g          348 t
ORIGIN      
        1 tccgcgccag cgggcgcccg ccaggcgcca cccgcgaagc cataccgatt cagtcgttac
       61 atgccaccag gtgttggacc ctgagttctc tcactgggga atcggcaact ggttattggc
      121 aagtgaccga cccccgtcac accgtctggc cgtcgccacg aagagcgccg gcccttttgt
      181 ctctggctgc gggggcatcg gaacgactcg gacccgatcg aagccggcgc ccagcagccg
      241 tcgaagctgc tcctccgaga atcccagcca cacgtgtccc atctgctgcc ggtattcctc
      301 gtgctcgtgc ggcagcatgt cggcgatcag cacgcggccg ccagggcgca gcacgcgcgc
      361 ggtctcggcg agcgcagccg ccggatcggg caggtggtgc agcaccagca gcagcgtgac
      421 ggcgtcgagc tccgcgtcgg cgatcggcag cgcctcgagc tcccctcgcc gtacttccac
      481 gttcgccgcg tcgcgcagcc ggcgtcgcgc ggcctggagc atgtcgcccg aacgatcgac
      541 cgcgatcacg cgtgccacaa acggcgcgag cgccgacgcg acctggcccg tgccgcaccc
      601 caggtccccc acgacccacc gctcgtcgag caacgcgggc agcgcctgga gatgcgacga
      661 ggcgccgaac aactcgccgc gcagcttgtc ccactgcccc gccgccgagt cgaaaaactg
      721 cgccgacttg gactggcgcc gcgcgagcac gcctttcagg cgccgcgcgt cctggtcggc
      781 gcccggcgtg gcgctcaact gttcgcggag cagcgcccag aggcgtcgcg ccgcgggccc
      841 gcgctcgtcg agcgcgagcg tgtagtgtcg gctcgtcccg tcgcgccgcg agatcgccca
      901 ggaggcgtcc gacagtgtct tcagatgccg gctgacagtg gactgcggca gctgcagcac
      961 ggcgcacagc tccgtgaccg tcagttcctg ccgctccagg agcagcagca tgcggctgcg
     1021 ggtcgcgtcc gagagggccg aaaggtcctc aaggatggcg gttggtgagg cacccatgtt
     1081 caatccgtat atccggattg agtgttacat aggaagacgg cggcgtcaag accttgtgga
     1141 ctggtccgct cgaggcacga cctgacggtc ctactgacgc cgtagcacgc gtccgggccg
     1201 agcggccgtg aacgcgccct ggtcgacgac gaggacgccg ttgaccagga cgtaatccat
     1261 cccttccgcg agctggtgcg gatcggcgta cgtcgcgcgg tcgcggatcc gcgccggatc
     1321 gaaaatcgcg acgtccgcgg ccgccccttc ccgaattgcg ccgcggtcct tcatcccgaa
     1381 caccgccgcc ggcaacgccg tcatcgaacg gacggccatt tccagatcga cgacgcggcg
     1441 atcgcggacg tagcgcgaca gcttcctcgc aaacgcgccg ttgttgcgcg gatggggcat
     1501 tccctctcct ggtgccgtga gcgcgccgtc gctcgacgtc atggtgtacg gcttcttcat
     1561 gatgtgcgcg atgtcctctt cggacatgtt gaaggagacg atcgacgccc cgccgctgcc
     1621 gatgatgtcg aaggcggcct gctccggcga cacaccacgt tccttcgcga tcgcctcgag
     1681 cgtcttgccc tccagcgcgc gatcggcctt gtggaacgcg atctgcacgg aagccggccc
     1741 gcccctccgc cgcaggttct cggcgatcac ctcgatcgtc ggcttcacgc cgccgggcgc
     1801 gagcgctgct gcgaggcttg tggacgaggc atcgtagggg tactgatccg cgaatacctg
     1861 cacgccgcgc tgccgcgccg cttccatgcg catcgtcatg gccgtcgcga gtccccagct
     1921 gtccgggccg agcgccttca tgtggctcac gatccccgtg aggccgccct cctccgcgat
     1981 gcgtatcacc tcgagcaccg aggcgacgat gccgatgttg tagttgcctt cgtcgcgcac
     2041 gtggctcgtg tatagtccgc cgaactccgc cgccaccttc gtcaggtcga tgacttcttc
     2101 agtcttcgcg aaactg
//
LOCUS       DASSYW010000385         3947 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1287817, whole genome shotgun sequence.
ACCESSION   DASSYW010000385 DASSYW010000000
VERSION     DASSYW010000385.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3947)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3947)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3947
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1287817"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            30..1220
                     /locus_tag="VFN38_06160"
     CDS             30..1220
                     /locus_tag="VFN38_06160"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HET9011380.1"
                     /translation="MLSLTRRLAIASVFISVGFAAGLVLTGRLRTADYVDAQTAREEA
                     AAGTQAAARLAPQAPTQLPDLMAAAQLAIPSVPNISSQQVVRTPNSPFMNDPFFRDFF
                     GDAPFGYRDRLQQSLGSGVVVSADGYVLTNNHVIGDAGAEVSVTLADKREMRAKIVGV
                     DDATDLAVLKIDARNLPVLAWGDSSKLKVAEWVLAIGNPFGVLNQTVTHGIVSATGRN
                     LEGQLASYVDFIQTDAAINQGNSGGALINTRGELIGINTAIFSQSGGSQGVGFAVPSN
                     VAKHVMQELITYGGVRRGTILGIELYPMDERVARQLGAPSAKGVLVYRISADSDAYAA
                     GVRRYDIIVSFNGKPVDDASQFLRQLSNSAIGSTATLGLLRDGRTITAKVPIVQTAGG
                     RRSR"
     gene            complement(1168..1821)
                     /locus_tag="VFN38_06165"
     CDS             complement(1168..1821)
                     /locus_tag="VFN38_06165"
                     /EC_number="3.2.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF002003.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003905 - alkylbase DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase"
                     /protein_id="HET9011381.1"
                     /translation="MILPRAFYARPTLEVAKDLIGKVLVHETRSGLAAGVIVEAEAYV
                     GESDPACHAAPGPTARNAPLYGPPGVAYVYLNYGVHYLVNAVTEPEGSPAAVLIRALE
                     PIEGEPLMRRRRAKGTRRTAGAFAHLDLCRGPGNLTRALGISLAQNRLALTSGPLRIE
                     DRGLPARDVSWSRRIGITVGVEAEWRVFARDSAALSGRPALNGCGGRRRSGRSVPSR"
     gene            complement(1824..3092)
                     /locus_tag="VFN38_06170"
     CDS             complement(1824..3092)
                     /locus_tag="VFN38_06170"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HET9011382.1"
                     /translation="MSRPEICRVRVWHRAVRLALPAVIVLSAAASAQTAKFEDVVRNL
                     RNPDQKIRVSAVRLLREAGYAEAIVPLAPLVTDPIDAIQLEAIDAELAFFLIEPVPAK
                     KRVALVVEVRTDGRAAAAFDAGPLAVWPKVAPRELVDALLTAVDDEHKKVRLEAIYTL
                     GVVAGASGAPLPEPAAARLIKALDHYDPAIREVAARVIGRLKVKSATDGLLKAVNDSS
                     AAVRYASMRALGELREERAVQALTEQLNFYEKGEGAWSALDALARIAHHSSVPLFQSR
                     LDDRDPSLRRAAVEGLARAGDPTTVAKFVTAVNQDDAEPVRAAMAFALHKQGHANYLG
                     RLIDFMDSARTAAQVQGYLVELGADVVANVLPRLQEPDTGVREHLATALGVIGDQTAI
                     AALTPLKDDPDRDVASAATHAIERIRMTQK"
     gene            3356..3760
                     /locus_tag="VFN38_06175"
     CDS             3356..3760
                     /locus_tag="VFN38_06175"
                     /inference="COORDINATES: protein motif:HMM:NF012610.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HET9011383.1"
                     /translation="MLFQLNFKSGKAVYLQLVDQVKLAAASGTLRAGEALPGIRPLAE
                     QLRVNRNTVAKAYTELEAQGIVENLAGKGCFLRETSSPYRKDVRRKLLADTLDDAAVH
                     AHHLQIGKEDFLKVAEERFDALEHRRARTSST"
     gene            3757..>3947
                     /locus_tag="VFN38_06180"
     CDS             3757..>3947
                     /locus_tag="VFN38_06180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HET9011384.1"
                     /translation="MTAMTYDAPPIEIRNLVRRYGRTDAVDGLTLRVPPGCCYGFFGR
                     NGAGKTTTIKCLLNLIRPT"
BASE COUNT          629 a         1377 c         1323 g          618 t
ORIGIN      
        1 gcatcgaagt ctcgtagcgc aggggacgca tgctcagtct gacccgacgc ctcgcgatcg
       61 ccagcgtctt catctcggtg gggttcgccg ctggtctggt gctgaccggc cgcctgcgca
      121 ccgccgacta cgtcgacgcg cagacggcgc gcgaggaggc cgcggccggc acccaggcgg
      181 cggcgcgcct cgcgccgcag gcgccgacgc aactgcccga cctcatggcc gcggcgcagc
      241 tggcgattcc gagcgtgccc aacatctcgt cgcagcaggt cgtgcggacg cccaactcgc
      301 cgttcatgaa cgatccgttc ttccgcgatt tcttcggcga cgcacccttc ggctaccgcg
      361 accgcctcca gcagagcctc ggatcgggcg tcgtcgtcag cgccgacggc tacgtgctga
      421 ccaacaatca cgtgatcggc gacgccggcg ccgaggtctc ggtcacgctg gcggacaagc
      481 gagagatgcg cgcaaagatc gtcggtgtcg acgacgcgac cgacctcgcg gtgctgaaga
      541 tcgacgcgcg gaaccttccg gtccttgcgt ggggagactc ctcgaagctg aaagtggcgg
      601 agtgggtcct cgcgatcggc aatcccttcg gcgtcctcaa tcagacggtg acgcacggga
      661 tcgtcagcgc gacggggcgc aacctcgagg gacagcttgc gagctacgtc gatttcattc
      721 agaccgacgc cgccatcaac cagggcaact ccggcggcgc gctgatcaac acgcgcggcg
      781 agctcatcgg catcaacacc gcgattttca gccagtccgg cggatcgcag ggggtgggct
      841 tcgccgtccc gagcaacgtc gccaagcacg tgatgcagga gctcatcacc tacggcggcg
      901 tccgccgcgg cacgattctc ggaatcgagt tgtacccgat ggacgagcgc gtcgctcggc
      961 agctcggcgc gccgagcgcg aagggcgtgc tcgtgtacag aatctccgcc gactccgacg
     1021 cctatgccgc cggcgtgcgc cgctacgaca tcatcgtcag cttcaacggc aagccggtcg
     1081 atgacgcgtc gcagttcctg cgccagctgt cgaactcagc gatcgggagc acggcgacgc
     1141 tcgggctcct ccgcgacggc cgcacgatca ccgcgaaggt accgatcgtc cagaccgccg
     1201 gcggccgccg cagccgttga gcgcgggccg gcctgacaag gccgcgctgt cccgcgcgaa
     1261 gacgcgccac tccgcctcca cgccgacggt aatcccgatg cggcggctcc agctgacatc
     1321 ccgcgccggc agcccgcgat cttcgatccg cagcggcccg ctggtcagcg ccagacgatt
     1381 ctgggcgagc gagatcccga gcgcgcgcgt gaggttgcct ggcccgcggc acagatcgag
     1441 gtgagcgaac gcgccggcgg tgcgccgcgt gcctttcgcc cgccggcggc gcatcagcgg
     1501 ctcgccctcg atcggttcga gggcgcgaat caggacggcg gcgggagacc cttccggttc
     1561 ggtgacggcg ttcaccaggt aatgcacgcc gtaattgaga tacacgtagg cgacgccggg
     1621 aggcccatag agcggcgcgt tgcgcgcggt cggtcccggc gccgcgtggc atgccgggtc
     1681 ggattcgccg acgtaggcct cggcttcgac gatgacgccg gcggcgaggc cggagcgggt
     1741 ctcgtgcacg aggactttgc cgatcaggtc ttttgcgacc tcgagcgtgg ggcgcgcata
     1801 aaacgcgcgc ggcaggatca cgtctacttc tgcgtcatcc tgatccgttc gatcgcgtgc
     1861 gtcgcggcag aggcgacgtc gcggtcggga tcgtccttga gcggcgtcaa cgccgcgatc
     1921 gctgtctggt cgccgatcac tccgagtgcc gtggcgaggt gctcgcggac gccggtgtcg
     1981 ggctcctgca gccgcgggag cacgttcgcc acgacgtcgg cgccgagctc gacgagatag
     2041 ccttgcacct gtgccgccgt tcgcgcggaa tccatgaagt caatcaggcg gccaaggtag
     2101 ttggcgtgcc cctgcttgtg cagcgcgaac gccatcgccg cgcgcaccgg ctccgcgtcg
     2161 tcctggttga ccgcggtgac gaacttcgcg acggtcgtgg ggtcgccggc gcgcgccagc
     2221 ccttcgacgg cggcgcggcg caggctcgga tccctgtcgt cgagccgcga ctggaagagc
     2281 ggcacgctcg agtgatgcgc gatgcgcgcg agcgcatcga gcgccgacca ggcgccctcg
     2341 cccttttcgt agaagttcag ctgctcggtt aacgcctgga ccgcgcgttc ttcgcgcaac
     2401 tccccgagcg cccgcatcga cgcgtagcgc acggccgcgc tcgagtcgtt gaccgccttc
     2461 agcagtccgt ccgtcgccga cttgactttc agccggccga tgacgcgggc agcgacctcg
     2521 cggatcgccg gatcgtagtg atcgagcgcc ttgatgagcc gggcggcggc cggctccggc
     2581 agcggcgccc ccgaggcccc ggcgacgacg ccaagggtgt agatcgcctc gagccggacc
     2641 ttcttgtgct catcatcgac cgcggtgagc agcgcgtcga cgagctcgcg gggagcgacc
     2701 ttcggccaca ccgcgagcgg tccggcgtcg aatgccgcag ccgcgcggcc gtcggtgcgc
     2761 acctcgacga cgagcgcgac gcgcttcttc gccggcaccg gctcgatcag gaagaacgcg
     2821 agctcggcgt cgatcgcctc gagctgaatc gcgtcgatcg ggtcggtgac gagcggcgcc
     2881 agcggcacga tcgcctcggc gtagcccgct tcgcgcagca gccggacggc gctgacgcgg
     2941 atcttctgat cggggttgcg caggttgcgg acgacgtctt cgaacttcgc ggtttgtgcg
     3001 gaggctgcgg ccgacaacac gatgaccgcc ggcagcgcca gccgtacagc gcggtgccac
     3061 acgcgaacac gacagatctc tggtctcgac atgaaagctt tcaggggagc gtcagtattg
     3121 taaccgacct gcgcactgcc tcgacgaaca aacatgcggc ggttggctgg cggcatcgct
     3181 gagctgcacg tcttttaccg cttttaccgc ccctgatttc gcgttcaccg cgcctcactc
     3241 cgtttccgcg gctgcgcgtc gcggcgcgcg gcgtctatgt aacggcgcgc cccgtgaacc
     3301 ggcgcccctt gcacccggct cccgtatctg tcatactgtc atatgacagt tgccgatgct
     3361 cttccaactg aacttcaaat cgggcaaagc ggtctacctg cagctggtcg accaggtgaa
     3421 gctcgccgcc gcgtcgggaa cgcttcgcgc cggcgaggcg ctgccgggta tccggccgct
     3481 cgccgagcag ttgcgcgtca accgcaacac cgttgcgaag gcgtacacgg agctcgaggc
     3541 gcaggggatc gtcgagaacc tcgccggcaa gggctgcttc ctgcgcgaga cctcctcgcc
     3601 gtacaggaaa gacgtccgcc ggaagctgct cgcggacacg ctcgatgacg ctgcggtgca
     3661 cgcgcatcac ctccagattg gcaaggaaga tttcctcaag gtcgccgaag aacggttcga
     3721 cgcgctcgag cacagacgcg ccaggacctc gagcacatga ccgccatgac atacgacgcc
     3781 cctccaatcg aaatacgaaa tctcgtccgc cgctacggcc gcacggacgc cgtggacggc
     3841 ctcaccctcc gcgtgccgcc tgggtgttgc tacggcttct tcggcaggaa cggcgccggg
     3901 aagacgacca cgatcaaatg cctgctcaac ctgatccggc cgacgag
//
LOCUS       DASSYW010000386         2929 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1456609, whole genome shotgun sequence.
ACCESSION   DASSYW010000386 DASSYW010000000
VERSION     DASSYW010000386.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2929)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2929)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2929
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1456609"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1543
                     /locus_tag="VFN38_06185"
     CDS             <1..1543
                     /locus_tag="VFN38_06185"
                     /inference="COORDINATES: protein motif:HMM:NF027637.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="zinc-dependent metalloprotease"
                     /protein_id="HET9011385.1"
                     /translation="VRSALLDGARWWNQAFEAAGYRGAFRVEILPDSADPMDVRYNVV
                     QWENRNERGWSIGGSLGDPRTGEIRKGMARMDSHRARTDYNLYAALMGADAAAADTAF
                     VLARVRQVSAHEVGHTLGLQHNYIASTYGRASVMDYPAPRARLGADGDIDLSSAYGTG
                     PGDYDVWAIRYGYGVFPAGTERDSLAAIVAEGLRKGYLYLSDGDARPESASDPRTNLW
                     DDASTPNEFLRHQTEVRRVALSRFGLRNIRVGEPVATLEERLAPLYFWHRLALNGVTK
                     TIGGMEYASAVRGDGQTATRPIDGRRQREALTLLLAALQPAELAIPDTVLSLIGPRPS
                     GYDAATNNTNSPVGELFRGRTDPAFDELSAARTLAQMIVDGILQRERAARLVAFATRG
                     PDMLTLGETVDSLVARTWNARDAGASPKLVALRRVTQRAVADRLLAMAADTDAAPEVR
                     AMAEYQIGRLRAVAQQRSVAGDTMSRAHWASLAGDFARWVERRELPRPSPPLVAPPGD
                     PFGEP"
     gene            complement(1618..2883)
                     /locus_tag="VFN38_06190"
     CDS             complement(1618..2883)
                     /locus_tag="VFN38_06190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011386.1"
                     /translation="MKMRSFWRSAPAPTAAPSAAPARDARDRRGFALPMAILVIAFLT
                     ATISAAYTATSSELVTNMAQRGESKAYMVAQAGLENFMARRNEVGFCAMCGIPPTTTY
                     ESTTVALPGGYAQVVAQRIRTGNNTRPGIYLLRSRGVDTSSRLLSGSSLRSSLNAFGS
                     TGGDSARAARTVAQLVFWNVNQVNVLSGWTATNGLDKTGSSGTISGVDNCGRKAAVAG
                     IAVPDGDYGVNGNFTPSGNPPVQYLGTQAQANAAVRIDWDGIVNGNRIQPDYIFTSNA
                     DAQARWPWPTLSLSMYPVVRVNGDLTMPAAGGQGTLIVLGDLKINGNNLWRGIILVGG
                     TMDSDGNGTMLGATMSGLNTMLTPAQLTAAQQLTGSSGTVLSATPPRATANGTKTFQY
                     DSCQVANAAGGLASYSVFPNAWMDNFVTY"
BASE COUNT          408 a         1040 c         1069 g          412 t
ORIGIN      
        1 cgtgcgctcg gccctgctcg acggcgcccg ctggtggaac caggcgttcg aggcggcggg
       61 ctaccgcggc gccttccgcg tcgagatcct gcccgacagc gccgacccga tggacgtgcg
      121 ctacaacgtc gtgcagtggg agaaccgcaa cgagcgcggc tggtcgatcg gcggctcgct
      181 gggcgacccg cgcacgggag agatccgcaa ggggatggcg cgcatggact cgcatcgcgc
      241 ccgcaccgac tacaacctgt atgcggcgct gatgggcgcc gacgccgcgg ccgccgacac
      301 ggcgttcgtg ctggcgcgcg tgcgccaggt gagcgcgcac gaggtggggc acaccctcgg
      361 cctccagcac aactacatcg ccagcaccta cggccgcgcg tcggtgatgg actatccggc
      421 gccgcgggcg cggctcggcg ccgacgggga catcgatctc tcctcggcgt acggcacggg
      481 cccgggcgac tacgacgtgt gggcgatccg gtacgggtac ggcgtcttcc cggccggcac
      541 ggagcgcgac tcgctggccg ccatcgtcgc cgagggactg cggaagggct acctgtacct
      601 cagcgacggc gacgcacggc cggaaagcgc gagcgacccg cgcaccaacc tgtgggacga
      661 cgcgtcgacg ccgaacgagt tcctccggca ccagaccgag gtgcggcgcg tggcgctgtc
      721 gcgcttcggg ctgcgcaaca tccgcgtcgg cgagccggtg gcgacgctcg aggagcgcct
      781 cgcgccgctg tacttctggc accgcctcgc gctcaacggc gtgacgaaga cgatcggcgg
      841 gatggagtac gcgagcgcgg tgcgaggcga cggccagacg gcgacgcggc ccatcgacgg
      901 gcgccggcag cgcgaggcgc tcaccctgct cctcgccgcg ctgcagccgg ccgagctggc
      961 gatccccgac accgtgctct cgctcatcgg cccgcggccc agcggctacg acgccgcgac
     1021 gaacaacacc aacagccccg tgggggagct gttccgcggt cgcaccgatc cggcgttcga
     1081 cgagctgtcg gcggcgcgca ccctggcgca gatgatcgtg gacggcatcc tccagcgcga
     1141 gcgggcggcg cgcctcgtgg cgttcgccac gcgggggccc gacatgctga ccctcggcga
     1201 gacggtcgac tcgctcgtcg cccgcacctg gaacgcgcgc gacgccggcg cttcgcccaa
     1261 gctcgtcgcg ctgcgccgcg tgacccagcg cgccgtggcc gaccggctgc tcgccatggc
     1321 ggccgacacc gatgcggccc ccgaagtgcg cgcgatggcc gaataccaga tcgggcggct
     1381 ccgcgcggtg gcgcagcagc ggagcgtcgc cggcgacacg atgagccgcg cgcactgggc
     1441 gtcgctcgcc ggggacttcg cgcgctgggt ggagcgtcga gagctcccgc gaccgtcgcc
     1501 cccgctggtg gccccgccgg gcgatccctt cggcgagccg tagcgcccac gcggaaacga
     1561 cgatggcccc gggcgagcgc ccggggccat cgtgtgtcga gcgggagcga tggcgcgcta
     1621 gtacgtgacg aaattgtcca tccacgcgtt ggggaacacc gagtacgatg ccaggccacc
     1681 ggcggcgttg gcgacctggc acgagtcgta ctggaaggtc ttggtcccgt tcgccgtggc
     1741 gcgcggcgga gtggccgaca gcaccgtccc gctgctgccg gtgagctgct gcgccgcggt
     1801 gagctgcgcg ggcgtgagca tcgtgttcag cccgctcatc gtggcgccga gcatcgtacc
     1861 gttgccgtcc gagtccatcg tgccgccgac gaggatgatc cctctccaga ggttgttgcc
     1921 gttgatcttc aggtcgccca ggacgatgag ggtgccctgg ccgcccgcgg ccggcatggt
     1981 gaggtcgccg ttgacgcgaa ccaccggata catggagagc gacagggtgg gccagggcca
     2041 ccgggcctgc gcgtccgcgt tcgaggtgaa gatgtagtcc ggctggatcc tgttgccgtt
     2101 gacgatgccg tcccagtcga tcctcaccgc ggcgttggcc tgtgcctgcg tgccgagata
     2161 ctggaccggc gggttgccgg acggcgtgaa gttgccgttc acgccgtagt ccccgtcggg
     2221 cacggcgatg cccgccaccg ccgccttcct gccgcagttg tcgacgccgc tgatcgtgcc
     2281 ggacgagccg gtcttgtcca ggccgttcgt ggccgtccag cccgagagca cgttcacctg
     2341 gttcacgttc cagaacacga gctgggccac ggtgcgcgcc gcgcgcgcgc tgtcgccgcc
     2401 ggtgctgccg aacgcgttca ggctcgatcg cagcgaggag ccgctgagca gccggctgga
     2461 cgtgtccacc ccgcgcgagc gcagcaggta gatccccggc cgcgtgttgt tcccggtgcg
     2521 gatgcgctgc gccaccacct gggcgtagcc gcccggcagc gccaccgtgg tggactcgta
     2581 cgtcgtcgtg ggcgggatgc cgcacatggc gcagaagccg acctcgttcc ggcgcgccat
     2641 gaagttctcc agccccgcct gcgccaccat gtacgccttg ctctcgccgc gctgcgccat
     2701 gttcgtcacc agctcggacg acgtggcggt gtaggcggcg gagatcgtcg cggtcaggaa
     2761 ggcgatgacg aggatcgcca tcgggagggc gaagccgcga cgatcgcgcg cgtcgcgcgc
     2821 gggagccgcc gagggtgcag cagtgggtgc aggcgccgag cgccagaagg aacgcatctt
     2881 catgggtctc tccgattctt gaagaacact ccggtgacca gcccctgct
//
LOCUS       DASSYW010000387         3616 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_849941, whole genome shotgun sequence.
ACCESSION   DASSYW010000387 DASSYW010000000
VERSION     DASSYW010000387.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3616)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3616)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3616
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_849941"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..269
                     /locus_tag="VFN38_06195"
     CDS             <1..269
                     /locus_tag="VFN38_06195"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HET9011387.1"
                     /translation="LPHLFDRYWQVRTTGRAGAGLGLAIAKGIVEAHGGAISVTSAVG
                     AGTTFSFTIPVARSADGAPVARSEGLFPTHQPRTPRPNDGVARA"
     gene            330..1571
                     /locus_tag="VFN38_06200"
     CDS             330..1571
                     /locus_tag="VFN38_06200"
                     /inference="COORDINATES: protein motif:HMM:NF013884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase family protein"
                     /protein_id="HET9011388.1"
                     /translation="MQRARSLPGPPRERNLVIDWLRLLGICAVLVIHIGEVFNPWDEW
                     HVSNPERSRLAGEVVVFFAPWIMPLLMLLAGWSSWYALQRRSARRFAGERVLRLGLPL
                     LLGVFVLVLPQVYLERRMRGQFDGSLIAFVPHFFEGVYPRGNLSWHHLWFLAHLLVYS
                     LLALPLFLHWRTESGRHQLRRVAAWCAGPFGLLWLAAPLVLERHVLWWLLSDSTALAS
                     DWANHAILLVAYVYGYMLAAEPALAEDVDRQWRSALLFAVAMSAALWSLAWRGALPNH
                     LPQPYSAGYLAFWSIYGVGAWAWLVALLGLARRWTWTTSALFEWARARSYAWYLVHQL
                     IVVAAAVVVVPMRLPLAAKVAAVAALSVVGTVVGTELLAHFAATRVLIGLPAGRGRER
                     ERERAAPASPPPVVSGSPATR"
     gene            complement(1546..2427)
                     /locus_tag="VFN38_06205"
     CDS             complement(1546..2427)
                     /locus_tag="VFN38_06205"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HET9011389.1"
                     /translation="MALALLAAGGLAVAASCTLARPAMSRVGAAPVALAADTTSFASA
                     SGSVIHAWFSAGRPRGGAVLLLHGVGADRRVMLDRARFLHAAGYAVLIPDFQAHGESP
                     GAHITYGALESLDAAAAVAWLRARAPGERVGVIGVSMGGAAALVGPGGPLAADAFVLE
                     SVYPTIREATRDRLRAWFGPFGPPMTPALLRFIGGRIGVVPDSLRPIERIARLAAPVL
                     VAAGTADRYTTIGETRALYARAASPKELWPVEGAGHVDLHAYAPAEYERRVSTFLGRW
                     LRPAEGGLATTGSPASR"
     gene            2678..>3616
                     /locus_tag="VFN38_06210"
     CDS             2678..>3616
                     /locus_tag="VFN38_06210"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HET9011390.1"
                     /translation="MTEVSRPASQPTLQPGAARQSKQIIVAASDGESDTVLGAARLLA
                     GRIGAEVVVLSVVEPLPPFTGDREELILPPGLVESQAATRHGSVEQHVERARAAAGDR
                     SAPWPVEVRYGRPAQTIAAEAALSDADLVVMGIGRHKPIDRLLATETTLATVRHATCP
                     VFAVAGETRALPTVAVAATDFGPASLRAARAALPLLADGATLYLVHVWSHAGTSHPAL
                     AEADAAYERNLPARFSRLQELLAAPPSIQVRPVELVGRPAEDVLEFARGHGAELLVAG
                     THGGGFLDRLLVGSVATALLRGARCNVLVAPEPPLAQ"
BASE COUNT          400 a         1437 c         1298 g          481 t
ORIGIN      
        1 acctgccgca cctgttcgac cgctactggc aggtgcggac gacgggacgc gccggggcgg
       61 ggctcggact ggcgatcgcc aaggggatcg tcgaggcgca cggcggcgcg atctcggtga
      121 cgagcgcggt cggcgccggg acgaccttct ccttcacgat cccggtcgcc cgctcggcgg
      181 acggcgcgcc ggtggcgcgc tccgaggggc tcttccccac ccaccagcca cgcacgccgc
      241 ggccgaacga cggcgtcgcc cgggcatagc ccgcgcgccg tcaggcagga gcggacgcgg
      301 cgcggcgccg cgcgccgcat cgtgggagca tgcagcgagc gcgatcactc cccgggccgc
      361 cgcgcgagcg caacctcgtc atcgactggc tgcgcctgct cgggatctgc gcggtcctcg
      421 tcatccacat cggcgaggtc ttcaacccgt gggacgagtg gcacgtctcc aatcccgagc
      481 ggagccgcct ggcgggggag gtcgtcgtct tcttcgcgcc ctggatcatg ccgctgctga
      541 tgctgctcgc cggctggagc agctggtacg cgctgcagcg ccgctcggcg cgccggttcg
      601 ccggcgagcg cgtccttcgc ctcgggctgc cgctcctcct cggcgtgttc gtgctcgtcc
      661 tcccccaggt ctatctcgag cggcggatgc gcggccagtt cgacggctcg ctcatcgcct
      721 tcgtcccgca cttcttcgag ggcgtctacc cgcgcgggaa cctctcctgg caccacctct
      781 ggttcctcgc ccacctcctc gtctactcgc tcctcgcgct ccccctcttc ctgcactggc
      841 gcaccgagtc cggacgccac cagctgcggc gcgtcgccgc ctggtgcgcc ggccccttcg
      901 gcctcctctg gctcgccgcg cccctcgtcc tcgagcggca cgtcctctgg tggctgctct
      961 ccgacagcac ggccctggcg agcgactggg cgaaccacgc gatcctcctc gtcgcctacg
     1021 tctacggcta catgctggcc gccgagccgg cgctcgccga ggacgtggac cgccagtggc
     1081 ggagcgcgct cctgttcgcc gtggcgatgt cggcggcgct ctggtcgctc gcctggcgcg
     1141 gcgcgctccc caaccacctt ccccagccct actcggcggg ctacctcgcc ttctggtcca
     1201 tctatggggt gggggcgtgg gcgtggctgg tcgccctgct cgggctggcg cggcggtgga
     1261 cgtggacgac gagcgcgctc ttcgagtggg cgcgcgcgcg gtcgtacgcc tggtacctcg
     1321 tgcaccagct gatcgtcgtc gcggccgccg tcgtcgtcgt gccgatgcgc ctgccgctcg
     1381 ccgccaaggt ggccgccgtc gccgcgctct ccgtcgtcgg gactgtggtc gggaccgagc
     1441 tcctcgcgca cttcgcggcg acgcgcgtcc tgatcggact gcccgccgga cgtggacgtg
     1501 agcgggaacg ggagcgcgcc gcgcccgcgt ccccgccccc cgtcgtcagc ggctcgccgg
     1561 cgacccggta gtcgcgagcc cgccctcggc gggccgcagc cagcgcccga ggaaggtgct
     1621 cacccgccgc tcgtactcgg cgggcgcgta ggcgtggagg tccacgtggc cggcgccctc
     1681 gacgggccag agctccttcg gggaggcggc gcgcgcgtag agggcgcgcg tctcgccgat
     1741 ggtggtgtag cggtccgccg tccccgcggc gacgagcacc ggcgcggcga gccgcgcgat
     1801 gcgctcgatc ggccgcagcg agtcgggcac cacgccgatc cgcccgccga tgaagcgcag
     1861 cagggccggc gtcatcgggg gaccgaaggg gccgaaccag gcgcgcagcc ggtcgcgcgt
     1921 cgcctcgcgg atcgtcggat acaccgactc gaggacgaag gcgtcggcgg ccagcgggcc
     1981 gccgggaccg acgagcgccg ccgcgccccc catcgacacg ccgatcaccc ccacccgctc
     2041 gccgggcgcg cgcgcgcgca gccaggcgac ggcggcggcg gcgtcgaggc tctcgagcgc
     2101 gccgtaggtg atgtgcgcgc cgggactctc gccgtgcgcc tggaagtcgg ggatgaggac
     2161 ggcgtagccc gccgcgtgga ggaagcgcgc gcggtcgagc atcacgcggc ggtcggcgcc
     2221 gacgccgtgg aggagcagca ccgccccgcc gcgcggccgg ccggcgctga accaggcgtg
     2281 gatgacgctc cccgaggcgc tcgcgaagct cgtcgtgtcg gcggcgaggg cgaccggcgc
     2341 ggcgcccacc cggctcatcg ccggccgggc cagcgtgcag ctcgcggcaa ccgccagtcc
     2401 gccggcggcg agcagcgcga gcgccaccga ccgtctcccg cgcgacgcgc ggaccgggag
     2461 ccgatcgttc tctccagcat cggtcatcat ccagggtcta cctgccctcc gacgggaacg
     2521 ttcccggtcg cgcccgctcg aataccaccc ccgttcgctg tccgccgaat gccgacagcg
     2581 ccgcgccccg ccgccgcgct tcgtgtgggc agcgcgacgg gatggtcggc tgcgagccgc
     2641 gcgggcgcgc cccgtcgata cgccatggag gtgtccgatg accgaagtct cccgtcccgc
     2701 cagccagccg acgctgcagc ccggcgcggc gcgacagtcg aagcagatca tcgtcgcggc
     2761 cagcgacggc gagagcgaca cggtgctcgg cgcggcgcgc ctcctcgccg gccgcatcgg
     2821 cgccgaggtc gtggtgctct ccgttgtcga gccgctcccc ccgttcacgg gggatcgcga
     2881 ggagctgatc ctcccccccg gtctcgtcga gtcgcaggcg gccacccgcc acggctccgt
     2941 cgaacagcat gtggagcgtg cccgcgccgc cgccggcgac aggagcgccc cctggccggt
     3001 cgaggtccgc tacgggcgcc ccgcccagac gatcgccgcc gaggcggccc tcagcgacgc
     3061 ggatctcgtc gtcatgggga tcggccgcca caagccgatc gacaggctgc tggccaccga
     3121 gacgacgctc gccaccgtcc gccacgcgac ctgcccggtg ttcgccgtcg cgggggagac
     3181 gcgcgccctc ccgacggtgg ccgtggccgc caccgacttc gggccggcga gcctccgcgc
     3241 ggcgcgggcc gcgctgccgc tcctcgccga cggcgcgacg ctctacctcg tgcacgtctg
     3301 gtcgcatgcg gggacgagcc atcccgccct cgccgaggcc gacgccgcct acgagcgcaa
     3361 cctgcccgcc cgcttctcga gactgcagga gctgctcgcc gcgcccccct cgatccaggt
     3421 caggccggtc gagctagtcg gccgccccgc cgaggacgtc ctcgagttcg cgcgcgggca
     3481 cggcgccgag ctcctcgtcg ccgggacgca cggcggcggc ttcctcgacc ggctgctcgt
     3541 cggcagcgtc gccacggcgc tgctccgcgg cgcgcgctgc aacgtgctgg tcgcgcccga
     3601 gccgccgctc gcccag
//
LOCUS       DASSYW010000388         2969 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1364433, whole genome shotgun sequence.
ACCESSION   DASSYW010000388 DASSYW010000000
VERSION     DASSYW010000388.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2969)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2969)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2969
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1364433"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..294
                     /locus_tag="VFN38_06215"
     CDS             <1..294
                     /locus_tag="VFN38_06215"
                     /inference="COORDINATES: protein motif:HMM:NF015535.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P1 family peptidase"
                     /protein_id="HET9011391.1"
                     /translation="AVVATNARMSKAEMSRVALMADDALARTINPSHTTGDGDTVFAL
                     ATSRWTGEASATIVGALAADALAEAIVRAVSTAEPLGGLPSARALGTAPARVK"
     gene            302..1699
                     /locus_tag="VFN38_06220"
     CDS             302..1699
                     /locus_tag="VFN38_06220"
                     /inference="COORDINATES: protein motif:HMM:NF012686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:solute symporter family protein"
                     /protein_id="HET9011392.1"
                     /translation="MSPHLALIAIYSVAVVGFGLWTSRYIRGSSDFFVAGRSLGPGLI
                     LSSMLAANIGAGATVNAAGLAYRDGLSAWWWSGSAGLASFALAFWVGPRLWTLAKEHG
                     FYTTGDFLEHRYGPAVRGIVSVLVTFGCLWILAAQLMAGAAILNVLTGAPRWLGSLIG
                     GGIMTVYFAAGGLLGTSLVNTFQLVVMLGGFAVALPFVLGHVGGLQAFASPSLPATFN
                     DFTYSAGPGSGWTFLALTGPAFVISPGLIQKSYGAANTRALKIGVGLNAVGLMLFAFV
                     PVLLGMAGRVGLPPQASPDLVLPSVLQLLLPTWLGALALAAVFSTEVDTSDAILFMIS
                     TSVSKDIYKRHLKPDASDADLLRVARISAVAGGALGVLLSIYLSAIVQAMTVFYSLLG
                     VSLFVPVLAGLYSKRAGSAEALGSIAAGVLTLLVVRFGVAGRYPWLDPTLTGLVAAAF
                     VYFGILAIRSRRARS"
     gene            1738..2814
                     /locus_tag="VFN38_06225"
     CDS             1738..2814
                     /locus_tag="VFN38_06225"
                     /EC_number="1.1.1.93"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009027 - tartrate dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0046395 - carboxylic acid catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tartrate dehydrogenase"
                     /protein_id="HET9011393.1"
                     /translation="MKTHRIAVIAGDGIGKEVIPAGIQVLKVAAEHDGFKLDFTDIPW
                     GCDYYLEKGKMLDADWRDQLLKFDAIYLGAIGDPRVSDAISARELILPLRQRLGQYVN
                     LRPMRLMPGISSPLANRGAADIDMICVRENSEGEYCGMGGRLHGGTPYELAEQTGIFT
                     RQGIERIARYAFKLAQTRPRRMLASATKSNALQHAMVLWDEVVADVAKEFPDVKLQKY
                     HVDALCARMVTHPHTLDVIVASNLFGDILTDIGSAISGSLGVGPGGNINPERTTPSMF
                     EPIHGSAPDIAGKGIANPIAAIWAGAMMVGHLGETKTEARILAAIEGVLADERVKTPD
                     LGGKATTADMTRAIASALGAGQPA"
BASE COUNT          416 a         1021 c         1025 g          507 t
ORIGIN      
        1 gccgtggtgg ccacgaacgc gcggatgtcg aaggcggaga tgagccgcgt ggcgctcatg
       61 gccgacgacg cgctcgcgcg cacgatcaac ccgtcgcata cgaccggaga cggcgacacg
      121 gtgttcgcgc tggccaccag ccggtggacc ggagaggcga gcgccaccat cgtcggcgcg
      181 ctggcggccg acgcgctggc cgaggccatc gtgcgcgcgg tgtccacggc cgaaccgctc
      241 ggcggcctgc cgtcggcgcg ggcgctcggc actgctccgg cgcgtgtcaa atagcatcta
      301 cgtgagtccg catctcgccc tcatcgcgat ctattcggtc gcggtcgtcg ggttcggcct
      361 gtggacgtcg cgctacatcc gcggcagcag cgacttcttc gtggccggcc gcagcctcgg
      421 ccccggcctc atcctctcgt cgatgcttgc cgccaacatc ggcgcgggcg ccacggtgaa
      481 cgcggcgggg ctcgcctacc gcgacggcct cagcgcctgg tggtggagcg ggtcggcggg
      541 gctggcgtcg ttcgcgctcg cattctgggt gggaccgcgc ctctggacgc tggcaaagga
      601 gcacgggttc tacaccaccg gcgacttcct cgagcatcgc tatggtccgg cggtgcgcgg
      661 catcgtctcg gtgctcgtta cgttcgggtg tctgtggatc ctggcggcgc agctgatggc
      721 cggagcggcg atcctcaacg tcctcaccgg cgcgccgcgc tggctcggct cgctcatcgg
      781 cggcggcatc atgaccgtct acttcgccgc cggcggcctg ctcggcacgt cgctcgtgaa
      841 cacgttccag ctcgtggtca tgctcggcgg cttcgccgtg gcactgccct tcgtgctcgg
      901 tcacgtggga gggctccagg cgtttgcttc gccgtcgctg ccggcgacct tcaacgactt
      961 cacctactcg gcgggccctg gctcagggtg gacgttcctc gccctcaccg ggcccgcctt
     1021 cgtcatctcg cccggcttga tccagaagtc gtatggcgcc gccaatacgc gagcgctcaa
     1081 gatcggcgtc ggcctcaatg cggtggggct gatgctcttt gcgttcgtcc ccgtgctgct
     1141 cggcatggcg gggcgcgtgg ggctgccgcc gcaggccagc ccggacctgg tgctgccatc
     1201 cgtgctgcag ctgctgctgc cgacgtggct cggcgcactc gcacttgccg cggtgttctc
     1261 caccgaggtc gatacgagcg acgcgatcct cttcatgatc tcgacgtcgg tgtcgaagga
     1321 catctacaag cggcacctga agcccgatgc gagcgacgcg gatctgctgc gcgtggcgcg
     1381 catttcggcc gtcgccggcg gcgcgctggg cgtgctgctc tcgatctatc tgagcgcgat
     1441 cgtccaggcg atgacggtgt tctattcgct cctgggcgtc agcctgttcg tgccggtgct
     1501 cgcgggcttg tattcgaagc gcgcaggctc cgccgaggcg ctggggtcca tcgcggcggg
     1561 cgtgctgacg ctgctcgtgg tacgcttcgg ggttgccggc cgctacccct ggctcgaccc
     1621 aacgctcacc gggctcgtag ccgccgcctt cgtctacttc ggtattctgg caattcgctc
     1681 tcgtcgggcg cgttcgtagc tgcaggcctt caggcctgcc cggagaatct ggttcgcatg
     1741 aagacccatc gcatcgcagt catcgccggc gacggcatcg gcaaggaagt catccccgcc
     1801 ggcattcagg tgctgaaggt ggccgccgag cacgacggct tcaagctgga tttcaccgac
     1861 atcccctggg gctgcgacta ctacctcgaa aaggggaaga tgctcgatgc cgactggcgc
     1921 gaccagctcc tgaagttcga cgccatctat ctgggcgcca tcggcgaccc gcgcgtgtcg
     1981 gacgcgattt cggcgcgcga gctgatcctg ccgctgcggc agcgcctcgg gcagtacgtg
     2041 aacctgcggc cgatgcgcct gatgcccggc atcagttcgc cgctcgccaa ccgcggcgcc
     2101 gccgacatcg acatgatctg cgtgcgcgag aactccgagg gggagtactg cggcatgggc
     2161 ggccgtctgc acggcggcac gccgtacgag ctggccgagc agaccggcat cttcacgcgc
     2221 caggggatcg agcgcatcgc gcgctatgcg ttcaagctgg cgcagacgcg gccgcgccgg
     2281 atgctggcga gcgccaccaa gtcgaacgcg ctgcagcacg cgatggtgct gtgggacgag
     2341 gtcgtggccg acgtcgccaa ggagttcccc gacgtcaagc tgcagaagta ccacgtggac
     2401 gcgctgtgcg cgcgcatggt gacgcacccg cacacgctcg acgtgatcgt ggcgtcgaac
     2461 ctgttcggcg acatcctcac cgacatcggt tccgcgatct cgggcagcct gggcgtcggc
     2521 cccggcggca acatcaatcc cgagcgcacc acgccgtcga tgttcgagcc gatccacgga
     2581 tcggcgcccg acatcgcggg caaggggatc gccaacccga tcgccgccat ctgggccggc
     2641 gcgatgatgg tcggccacct gggcgaaacg aagaccgagg cgcgcatcct tgcggcgatc
     2701 gaaggcgtgc tcgccgatga gcgcgtgaag acgccggacc ttggcggcaa ggccacgacc
     2761 gccgacatga cgcgagccat cgcgagtgcg cttggagcgg gacagccagc gtagccgccg
     2821 gtccctgcga gtgatcggcg tcgttgcact ggtgctcgcg ttgtccagtg tcacgccggc
     2881 acgcgagccg gcgttcgaac agacactggc ggcggcaaaa gaactgccgc gtctgcacag
     2941 cctgatcgtc agccgccggg gcgaagtgg
//
LOCUS       DASSYW010000389         2585 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1237434, whole genome shotgun sequence.
ACCESSION   DASSYW010000389 DASSYW010000000
VERSION     DASSYW010000389.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2585)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2585)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2585
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1237434"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            254..1858
                     /locus_tag="VFN38_06230"
     CDS             254..1858
                     /locus_tag="VFN38_06230"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HET9011394.1"
                     /translation="MFGIMACGEKPVVETVPLRPELAGFRRQITTKSAPAQKYFDQGF
                     TLYYGFNHDAAIASFAQAAAFDPNCAMAYWGQAASWGPNINNPAMDDSASKRAWDALQ
                     KAASFSASAAPVERDLIAALATRYAWPAPADRTGLDRAYADAMRQVWQKYPEDPDVGA
                     LCAEAIMDTRPWDLWSPTGEPRPETPEVIATLDKVIALVPDHPGASHFYIHTMEASPT
                     PEKALPAANVLRDRIPGAGHLVHMPAHIDIRLGHYDDALVANQKGIAADATWAAQQGG
                     FYTMYRAHNHHFLAYAAMFEGRREVALQAASAMLEQVPLAIVRQYIDVLDGFWAAPTH
                     VQVRFGMWNELLAAPAPPADLLVATAFWHYGRTVAAAALGRVDEAATELAAFQQAYAA
                     VPGSRFIGNNAARTVLEIGLPVAEGELEYRRGNFDHAFELLRLAVQRDDALRYDEPWG
                     WTMPVRHSLGALLLEQGRVDEAERVYREDLRLHPDNGWALHGLAECLRRSGRAAEAAD
                     VETRFRGAWTRSDIAIQGSCFCRTKS"
     gene            1956..2429
                     /locus_tag="VFN38_06235"
     CDS             1956..2429
                     /locus_tag="VFN38_06235"
                     /inference="COORDINATES: protein motif:HMM:NF017015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HET9011395.1"
                     /translation="MDMKQYLLETFAFNDRANKQVLAKLVTLPEKDECLRLFSHLVNS
                     QDKWLARITAYPHDPGLSWWEPVHALEALEREWDRSLRAWQEFLGSKEEPALFAEVKW
                     IGFDGAHWIAPLKDIALQLNYHSIHHRAQMQAILRAQGQTPEFVDYIGTVYRRLG"
BASE COUNT          420 a          866 c          885 g          414 t
ORIGIN      
        1 gctggctgcg acacccaggc cggacccggc ggctccaccg gaacttcgga gcgccacggc
       61 gcggcgtcaa gtggctggaa acgttgactc tacgcccgcc cgggtggggc cttgggacgg
      121 aactgctgac ccggccaggg cgaggttggt aggctgcgca tggctccggt ggcatgggca
      181 gaacgaggcc gcgacgcggc ctgaatgcgg gagtacacgg atgcgaaggg gagtacttgg
      241 aatcacgacc ctggtgttcg ggatcatggc ctgcggcgag aagccagtgg tcgagacggt
      301 gccgctgcgc ccggagctcg ccggctttcg acgccagatc acgacgaaat ccgcgccagc
      361 gcagaagtac ttcgaccagg ggttcacgct ctactacggc ttcaaccacg atgcagcgat
      421 cgcttctttc gcgcaggcag ccgccttcga cccgaactgc gccatggcct actggggcca
      481 ggcagcttcc tggggaccga acatcaacaa tccggccatg gacgactcgg cctcgaagcg
      541 ggcctgggat gcgttgcaga aggcggcatc gttttcggcg tcggccgcgc ccgtcgagcg
      601 tgatttgatc gcggcgctcg cgacgcgcta cgcctggccg gcgccagcgg accgcactgg
      661 gctcgaccgt gcctatgccg acgccatgcg gcaggtctgg cagaagtatc cggaagatcc
      721 ggacgtcggg gcgctctgcg ccgaggcgat catggacacg cggccctggg atctgtggtc
      781 gcccaccggg gaaccgcggc cggagacgcc cgaggtcatc gccacgttgg acaaggtgat
      841 cgccctggtt cccgatcacc ccggggcgtc gcatttctac atccacacca tggaagcatc
      901 gccgacgccg gagaaggcgc tcccggctgc caacgtgctg cgcgaccgca ttccgggtgc
      961 cgggcacctc gtgcacatgc cggcacatat cgacatccgt ctcggtcatt acgacgacgc
     1021 gttggtcgcc aaccagaagg gcatcgcggc cgatgccacg tgggccgcgc agcagggtgg
     1081 tttctatacg atgtaccgtg cgcacaacca tcattttctc gcctacgcgg ccatgttcga
     1141 gggccggcgc gaagtggcgc tgcaggcggc gagcgcgatg ctggagcagg ttccgctcgc
     1201 gatcgtgcgg caatacatcg atgtcctcga cggtttctgg gccgcgccga cgcacgtgca
     1261 ggtgcgcttc ggtatgtgga acgagttgct cgccgcgccc gcgcctccgg ccgatctcct
     1321 ggtcgccacc gcattctggc actacggccg taccgtggcc gccgccgccc tcgggcgtgt
     1381 cgacgaagcg gccaccgagc tcgcggcgtt ccagcaagcc tacgccgccg ttcccggcag
     1441 ccgcttcatc ggcaacaatg cggcgcgcac cgtcctcgaa atcggcttgc ccgtggccga
     1501 gggcgagctg gaataccggc gcggcaactt cgaccacgcc ttcgagctgc tgcggctcgc
     1561 ggtgcagcgt gacgacgccc tcaggtacga cgagccgtgg ggctggacga tgccggtgcg
     1621 ccattcgctc ggcgccttgc tgctcgaaca ggggcgcgtc gacgaggcgg agcgcgtcta
     1681 ccgcgaggac ctgcgcttgc acccggacaa cggctgggcg ctgcacgggt tggcggagtg
     1741 cttgcggcgc tccggtcgcg ccgccgaggc cgcggacgtc gagacccgat tccgtggcgc
     1801 ctggacgcgg tccgatatcg cgatccaagg ctcgtgcttc tgccgcacga agtcgtgagt
     1861 cgggcacggc cgcgagcgcg gcgtttgcat ccgaccagtc cattccacca ggatctggcc
     1921 agcgcacgag ccgctcgtcg gatggagtcg cgacgatgga catgaagcag tacctgctcg
     1981 agacgtttgc gttcaacgac cgcgccaaca agcaggtgtt ggcgaagctc gtgacgttgc
     2041 cggagaagga cgagtgcctc cggctcttca gccacctcgt caactcacag gacaaatggc
     2101 tggcacgcat caccgcgtac ccgcacgacc ccggcttgag ctggtgggag ccggttcacg
     2161 ccctcgaggc cctcgagcgt gaatgggacc ggagcctgcg ggcgtggcag gagttcctcg
     2221 gcagcaagga ggaaccggcc ctgttcgcag aggtgaagtg gatcggcttc gatggcgcgc
     2281 actggatcgc gccgctcaag gacatcgcgc tccagctcaa ctatcactcc atccaccatc
     2341 gggcgcagat gcaagccatc ctgcgcgccc agggacaaac gcccgagttc gtcgactaca
     2401 tcggtaccgt gtatcggcgc ctcggttgaa cacgatcgga gtcgctggct gggtgcgggt
     2461 ggcgcgtggg gtctggttcc gaaccgtcgc acctgaggtc gtgaacttcg aaggggccgt
     2521 ccgctgtcgg acggcccctt gccgcgccgg agcctctcag gtccggccag tcgagcaccc
     2581 gcccg
//
LOCUS       DASSYW010000390         2059 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1173113, whole genome shotgun sequence.
ACCESSION   DASSYW010000390 DASSYW010000000
VERSION     DASSYW010000390.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2059
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1173113"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2026)
                     /locus_tag="VFN38_06240"
     CDS             complement(<1..2026)
                     /locus_tag="VFN38_06240"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HET9011396.1"
                     /translation="MRMPGSGDAGATPRLALAVLLALLAPAPARAQQGTITGRVTAAG
                     SAEPVPDARVYVIGTNAVTATNADGRFILRSASGPVEVRVLRIGYQEQKRPVLVPAGG
                     SVTADFSLAMSLVTLTEVVTTATGQQRRVELGNQVTTLGDIGARVEQAPVKNLQDLLT
                     AKAPGVTVLPGNMTGSAPNVRIRGIKSLSLSSEPIYVIDGIRMNSTDVNISTGGTRPS
                     LLNVLNPEEIADIEIVKGPSAATLYGTDAANGVIVITTKKGTSGPARWTVHAGTGLVQ
                     DRNDYPTQYAVFGHAPATPATPLRCVLVTIAAGTCIADSTTSFNLLADPELSPFTDGH
                     TRQLGVQVSGGTETVRYFVTGDYEGEVGPIEMPGFSQRFLDSTGNAMREEWLHPENFS
                     RKSARANLNAAVNPKLDLSFNSGYTRTAQQLPPVDNNSASFMYNAFNNPGFRPTLACR
                     ANPASCLGYRNTGALGEELGGYGLYTPGNLFQRINTLSVDRFISSATAAWRPLEWLQT
                     DATVGLDLAHRDNVAMCRFNECQNAGTTRQGFVFNSKTIDRNMSAKASGTGTWQPKPS
                     LNLRTTLGADYVNQQSEFSSAEGDNLPPGAQSAGAGATQFAGSQFARANKTLGYYAQE
                     QLALRDLLFVTLAARTDQNSAFGTEFQRVVYPKASISYIISDEEYFPKPGW"
BASE COUNT          282 a          672 c          758 g          347 t
ORIGIN      
        1 gccagccggg cttcgggaag tactcctcgt ccgagatgat gtacgagatg ctggccttgg
       61 ggtagacgac gcgctggaac tcggtgccga aggcgctgtt ctggtccgtg cgcgccgcga
      121 gcgtgacgaa cagcaggtcg cgcagcgcga gctgctcctg cgcgtagtag ccgagcgtct
      181 tgttcgcccg ggcgaactgg ctgccggcga actgggtggc gccggcgccg gccgactggg
      241 cccccggggg aaggttgtca ccttcggccg aggagaactc ggactgctgg ttcacgtagt
      301 cggcgcccag cgtcgtgcgg aggttgagcg acggcttcgg ctgccaggtg cccgtgccgg
      361 acgccttcgc cgacatgttc cggtcgatcg tcttggagtt gaacacgaag ccctggcggg
      421 tggtgccggc gttctggcac tcgttgaacc ggcacatcgc gacgttgtcc cggtgcgcca
      481 ggtcgagccc gaccgtcgcg tcggtctgca gccattcgag cggacgccag gccgccgtgg
      541 ccgagctgat gaaccggtcc acgctcagcg tgttgatgcg ctggaacagg ttccccggcg
      601 tgtacagccc atagccgccg agctcctcgc ccagcgcgcc cgtgttgcga tagcccaggc
      661 agctcgccgg attggcgcgg caggcgagcg tgggccggaa gccggggttg ttgaacgcgt
      721 tgtacatgaa gctcgccgag ttgttgtcca ccggcgggag ctgctgcgcg gtgcgcgtgt
      781 agccggagtt gaagctgaga tccagcttcg ggttcacggc ggcgttcagg ttcgcgcggg
      841 ccgacttccg gctgaagttc tcggggtgca gccactcctc gcgcatcgcg ttcccggtgg
      901 aatcgaggaa gcgctggctg aagcccggca tctcgatggg gccgacctcc ccttcgtagt
      961 cccccgtgac gaagtagcgc accgtctcgg tgccgccgct cacctgcacc ccgagctgcc
     1021 gggtgtgacc gtcggtgaag ggcgaaagct ccgggtcggc cagcaggttg aacgacgtcg
     1081 tgctgtcggc gatgcaggtg cccgcggcga tggtgacgag cacgcaccgg agcggcgtgg
     1141 ccggcgtggc cggcgcgtga ccgaagacgg cgtactgggt gggatagtcg ttgcgatcct
     1201 gcacgaggcc cgtgcccgca tgcaccgtcc atcgcgccgg tcccgacgtg cccttcttcg
     1261 tcgtgatcac gatgacgccg ttcgcggcgt cggtaccgta cagcgtcgcc gccgagggcc
     1321 ctttcacgat ctcgatgtcc gcgatctcct ccgggttcag cacgttgagc aggctcgggc
     1381 gcgtgccccc cgtcgagatg ttgacgtccg tcgagttcat gcggatcccg tcgatcacgt
     1441 agatcggctc gctgctgagc gagagggact tgatgccgcg gatgcgcacg ttcggcgccg
     1501 agccggtcat gttcccgggc agcacggtga ccccgggcgc cttggcggtg agcaggtcct
     1561 gcaggttctt caccggcgcc tgctccaccc gggcgccgat gtcgccgaga gtggtgacct
     1621 ggttgcccag ctcgacgcgg cgctgctggc cggtggcggt ggtgacgacc tcggtcagcg
     1681 tcacgagtga catggccagc gagaagtcgg cggtcacgct gcctccggcc gggacgagca
     1741 ccggccgctt ctgctcctga tagccgatcc gaaggacgcg gacctccacc ggaccggacg
     1801 ccgagcggag gatgaagcgg ccgtcggcgt tggtcgccgt cacggcattg gtgccgatca
     1861 cgtacacccg ggcatcggga accggctcgg cggagccggc cgcggtcacc cgaccggtga
     1921 tggtgccctg ctgcgcccgg gccggcgcgg gggcgagcag tgcgaggaga acggcgagcg
     1981 cgagtcgcgg cgtcgcgccg gcatcgcccg agcctggcat tcgcatggga gtgtactccc
     2041 ggagagccat ccctcggcg
//
LOCUS       DASSYW010000391         2829 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1346028, whole genome shotgun sequence.
ACCESSION   DASSYW010000391 DASSYW010000000
VERSION     DASSYW010000391.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2829)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2829)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2829
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1346028"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..196)
                     /locus_tag="VFN38_06245"
     CDS             complement(<1..196)
                     /locus_tag="VFN38_06245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011397.1"
                     /translation="MPSDARNRPLRVAAFIGTRASDAERGPQVRLSPEDAHARLLTDG
                     ELAWVHGPRRQELATVAVDEQ"
     gene            complement(189..764)
                     /locus_tag="VFN38_06250"
     CDS             complement(189..764)
                     /locus_tag="VFN38_06250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011398.1"
                     /translation="MMMHIDVSSVLRQTLSCELYSNLVTRPTGAAVRTQIEALLGESR
                     ERTLTVIDFSHVGMIDFSCADEVVAKLLLPYVAQEPSDREAYFLFRGVTEDHWDAIEA
                     VLERHQLAMVMETADGEGAHIGGIVNDRERVAWNKVYELGRAAAADLATALGSPADDC
                     ARLLDALHRRRLLMRLDDDYVAVGGLADSRA"
     gene            complement(761..1654)
                     /locus_tag="VFN38_06255"
     CDS             complement(761..1654)
                     /locus_tag="VFN38_06255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HET9011399.1"
                     /translation="MTSVITVPPSLDDHTFEQVVEQLAAVPPDAKLVVDARHTRWASP
                     FGLTALLALGQTRETRAGFTVPDAEETASYWARTGFFRHAEELFELHGSVPRAKGGES
                     SVLLEITPVVKSEDVHEVVGRIQQKAQQILSKELNIDAKATVGFAMTLSEVCQNIVEH
                     AGRGGWVAVQTYTWRKRLANRRVVVIAVCDAGLGFRQSLESAPGRVRSDRWDDAAALE
                     EAVIRGVSRFRDPGRGQGLAGVRRYVGRWDGKVSVRSGTARIAIVPSWDDDVPLLEKL
                     APFPGSQVQVTIPERVAGGPR"
     gene            complement(1651..2628)
                     /locus_tag="VFN38_06260"
     CDS             complement(1651..2628)
                     /locus_tag="VFN38_06260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011400.1"
                     /translation="MIGTFVWDIIHGRDARAVPVQEWGGITYSLSGLDAALPDDWEIV
                     PIMKVGEDLAARAREFLGSLRRIAPDAALVEVPYPGHRVELRYYDDERRTEVLTGGIP
                     AWSWLALKPLLDDARLDALYINFLSGWELDLETAQLVRRHFDFPIHCDLHMLAMAVQP
                     DGLRTPRPIPHLAEWCGCFDFVQMNEEELATIAPDPMSLAATALAAGVSCLLVTLGKR
                     GAVYVAAPGFDTICDLPPRRGLSTGPRGGTGALGAVRTALVPAEIVNTPGDPTGCGDV
                     WGATYFSRMVAGDKLSDAMKAAGVAAARNVGHRGATGLAAHLRGELSLS"
BASE COUNT          388 a         1088 c          956 g          397 t
ORIGIN      
        1 cctgctcgtc caccgctacc gtcgcgagct cctgccggcg ggggccgtgc acccaggcca
       61 gctcgccgtc ggtcagcagc cgggcgtggg cgtcttccgg cgagaggcgc acctgcgggc
      121 cgcgctccgc gtcgctcgcg cgcgtgccga tgaatgccgc gacgcggagc ggccggttcc
      181 gcgcgtcgct aggcacggga gtccgcgagg cccccgacgg ccacgtagtc gtcgtcgagc
      241 cgcatgagca gccgccgccg gtgcagcgcg tccagcaggc gcgcgcagtc gtccgccggc
      301 gaaccgagcg ccgtggccag atcggccgcc gcggcccgcc cgagctcgta caccttgttc
      361 caggccacgc gctcgcggtc gttcacgatc cccccgatgt gcgcgccctc cccgtccgcc
      421 gtctccatga ccatcgcgag ctggtgccgc tcgagcacgg cctcgatcgc gtcccagtgg
      481 tcctcggtca cgccgcggaa caggaagtag gcctcccggt cgctgggctc ctgcgccacg
      541 tacgggagca gcagcttggc gacgacctcg tcggcgcacg agaaatcgat catgcccacg
      601 tgcgagaagt cgatcacggt gagcgtgcgc tcgcgcgact caccgagcag cgcctcgatc
      661 tgcgtccgca ccgcggcgcc ggtgggtcgc gtgaccagat tggaatagag ctcgcatgac
      721 agcgtctgtc gcagcacgga gctgacgtca atgtgcatca tcatcgcggg cccccggcga
      781 cccgctctgg tatggtgacc tgaacctgtg accccggaaa gggggccagc ttctccaaga
      841 gcggcacgtc gtcgtcccag ctcgggacga tggcgatcct cgccgtaccg ctgcgcacgc
      901 tcaccttccc gtcccatcgg cccacgtacc gccgaactcc cgcaagcccc tggccgcggc
      961 ccgggtcccg gaaccggctc accccccgga tgacggcctc ctcgagcgcc gccgcgtcgt
     1021 cccaccggtc gctccgcact cgcccgggcg cgctctccag cgactgccgg aagccgagcc
     1081 ccgcgtcgca caccgcgatc accacgactc gacgattggc gagccgcttg cgccacgtat
     1141 acgtctgcac ggccacccag ccgccgcgcc cggcgtgctc gacgatgttc tggcacactt
     1201 ccgacagcgt catcgcgaag ccgaccgtgg ccttcgcgtc gatgttgagc tccttgctca
     1261 ggatctgctg ggccttctgc tggatccgcc cgacgacctc gtgcacgtcc tcgctcttca
     1321 ccaccggcgt gatctcgagc agcacgctcg actcgccgcc cttggcccgc gggaccgacc
     1381 cgtgcagctc gaacagctcc tccgcgtggc ggaagaaccc ggtgcgtgcc cagtacgagg
     1441 cggtctcctc ggcgtcgggc accgtgaagc ccgcgcgcgt ctcgcgcgtc tggccgagcg
     1501 ccagcagcgc cgtcagcccg aagggcgacg cccagcgcgt atggcgcgcg tccacgacga
     1561 gcttcgcgtc cggcggcacg gcggcgagct gctccaccac ctgctcgaac gtgtggtcgt
     1621 cgagggaggg cgggacggtg atgacgctgg tcacgagagg ctgagttctc cgcgcaggtg
     1681 ggccgcgagt ccggtggcgc ctcggtgccc gacgttccgg gccgcggcca caccggccgc
     1741 cttcatcgcg tccgacaact tatcaccggc gaccatccgg gagaaatagg tggcgcccca
     1801 tacatcgccg cagccggtgg ggtcgccggg ggtattgaca atctctgcgg gcaccagtgc
     1861 ggtgcgcacc gcccccagcg cgccggtgcc gccgcgcggg ccggtggaca gcccgcgtcg
     1921 cgggggaaga tcacatatgg tgtcgaaccc cggcgcggcg acgtacaccg cgccccgctt
     1981 tcccagcgtc accagcaggc acgacacccc cgccgccagc gcggtcgccg cgaggctcat
     2041 cggatccggc gcgatcgtcg ccagctcctc ctcgttcatc tgcacgaagt cgaagcagcc
     2101 gcaccactcc gccagatggg ggatgggccg cggcgtgcgc agcccgtcgg gctgcaccgc
     2161 catcgccagc atgtgcaggt cgcagtggat cgggaagtcg aagtgccgcc gcaccagctg
     2221 cgccgtctcg agatcgagct cccagccgct caggaagttg atgtacaggg cgtcgaggcg
     2281 cgcgtcgtcg agcagcggct tgagcgcgag ccagctccag gcggggatgc cgccggtgag
     2341 cacctccgtg cggcgctcgt cgtcgtagta gcgcagctcc acgcggtggc cggggtaggg
     2401 tacctccacc agcgccgcgt cgggcgcgat gcgccgcagg ctgccgagga actcccgcgc
     2461 ccgcgcggcg agatcctcgc cgaccttcat gatcggcacg atctcccagt cgtcggggag
     2521 cgccgcgtcc aggccgctga ggctgtacgt gatgccgccc cactcctgga ccggcaccgc
     2581 gcgcgcgtcc cgcccgtgga tgatgtccca cacgaaggtg ccgatcacgc cgatacgccg
     2641 gcggcggccc ggctcccggg cgtccgccgg ttccggatcc ccccgtctca cacgccgccg
     2701 agctgctgct gcttgaagct ggcgacggcg cccacgacgc ccgcggtgcc cggcagggtt
     2761 cccggcacga tcttcaccgc gtgcaccgcg gggctgaacg cgcggcgccg cacctcggcg
     2821 cgcaggggg
//
LOCUS       DASSYW010000392         2174 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1006357, whole genome shotgun sequence.
ACCESSION   DASSYW010000392 DASSYW010000000
VERSION     DASSYW010000392.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2174)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2174)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2174
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1006357"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            95..955
                     /locus_tag="VFN38_06265"
                     /pseudo
     CDS             95..955
                     /locus_tag="VFN38_06265"
                     /inference="COORDINATES: protein motif:HMM:NF012377.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0071704 - organic substance metabolic
                     process [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cellulase family glycosylhydrolase"
     gene            complement(1073..1354)
                     /locus_tag="VFN38_06270"
     CDS             complement(1073..1354)
                     /locus_tag="VFN38_06270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011401.1"
                     /translation="MIRNMTLGLSLFALMTGSALAATPTHKHASKPVTVAAAPAADAA
                     KEPAKDAPKADAPKTDAAKPEKKKVKKEKAPKGEAPKTEMKSAPAPETK"
     gene            complement(1536..>2174)
                     /locus_tag="VFN38_06275"
     CDS             complement(1536..>2174)
                     /locus_tag="VFN38_06275"
                     /inference="COORDINATES: protein motif:HMM:NF039587.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5916 domain-containing protein"
                     /protein_id="HET9011402.1"
                     /translation="SAGLSGEVATDPRRPLTFWLSSSFDLRRGGGVIFGFNGQISLRA
                     LSRLELALLPTAGYESGAPRYVSKVEMAGAPTEYKFGMQTAASAGATLRASFTFTPEL
                     SLQWYTQLFLSRVHYGDYFTVTRPAGAVIRIDDLVTPATGTSNKESATLNINVVLRWE
                     YRLGSTLFVVYTRAQDPALMPSANGTGFQVRPLYEGRAADNVLMVKLAYWFG"
BASE COUNT          336 a          723 c          756 g          359 t
ORIGIN      
        1 cgtgaaccgc gccggctcgg agtacatgtg ctcgccgccg acgcaggggg ggaccacgtt
       61 cgacggctcg accggcccga ccagcatcag ctcgatgctg acctggaaca tcaacaccgt
      121 ccgcctgccc ctgaacgagc actgctggct cgggatcaac ggctcgctgg tgagcgccga
      181 tcaataccgc gccgacatcg aggactacgt catccgcctg caccgcaaga acatctacgt
      241 cgtgctcgac ctccactggt cggcgcctgg gacgacgcag atcaccggcg gctcgggcgg
      301 caaccagctg gtgacgatgg cgttcgccga tcacgcgatc gccttctgga cgtcggtcgc
      361 gacgacgttc aaggatgacc cgatggtgat cttcgacctg ttcaacgagc cgatcctgaa
      421 cgcgaacgat cgcttcggga acggcgcggt cggagatccg tggggctgct ggctgaacgg
      481 ctgcagcgtc tcgaagggcg cgacggccgg catgcagcag atgctgaacg cggtgcgcgc
      541 gacgggcgcc aaccaggtcg tggtggtggg cggcatcgag tggtcgcaca acctcgactc
      601 ctgactgcag cacaagccga gcgatccgat gaacaacatc atggccgcgt ttcacgtcta
      661 tcagcggcca ctgtcggact gcgacaccca gagctgctgg gacggcgcgc tggccaccgt
      721 cgcccagaac gtgccggtgc tgaccggcga gatgggcgag caggactgcg cgcacggctt
      781 catcgacggc tacatgaact gggccgacgc caaggggatc agctacctcg gctgggcgtg
      841 gaacgcgcag aactgcaaca cgttcccctc gctgatctcc aacgtcgacg ggacgcccac
      901 tgcgttcggc cagggattga aggatcacct ggcgacgatg ccggcccttc actagtcgct
      961 ccgcgccgca ggcgcggtct gcgactattg ttttttcagg tatctgcgac gtgaatagac
     1021 gaggccggcg atccgccggc ctcgtccatc ttgctgctcg tgcgagacgg agttacttgg
     1081 tctcgggcgc cggggcgctc ttcatctcgg tcttcggcgc ctcgcccttc ggggccttct
     1141 ccttcttcac cttcttcttc tccggcttcg ccgcgtcggt cttcggcgcg tccgctttcg
     1201 gcgcgtcctt ggccggctcc ttggcggcgt cggccgccgg cgccgccgcg accgtgacgg
     1261 gcttgctggc gtgcttgtgg gtgggcgtcg ccgccagggc cgagccggtc atgagggcga
     1321 agagcgagag gccgagcgtc atgttgcgaa tcatgtgaat cctccggttg gtcggtgtcg
     1381 atggtcgcgt catgcgacgg gaagggtgat ttgcacctcg ggtgccagcg cccggcgggg
     1441 cccgaaaccc gcgtccggtg cggcgccggc ggctgcgccg cgcgcggggt ggggcggttt
     1501 cgctgtggcg cccggccaga tcgcgccagc gcgcgctacc cgaaccagta cgccagcttc
     1561 accatcagca cgttgtccgc ggctcggcct tcgtacagcg gccgcacctg gaagccggtg
     1621 ccgttggcgg acggcatcag cgccggatcc tgtgcgcggg tgtagacgac gaacagcgtc
     1681 gagccgaggc ggtactccca acgcagcacg acgttgatgt tcagcgtggc gctttccttg
     1741 ttggacgtgc ccgtggcggg cgtgacgagg tcgtcgatcc ggatcaccgc gccggccggt
     1801 cgggtgaccg tgaagtagtc gccgtagtgc acgcgcgaga ggaagagctg cgtgtaccac
     1861 tgcagcgaca gctcgggcgt gaacgtgaaa gacgcgcgca gcgtggcgcc cgcgctcgcc
     1921 gcggtctgca tgccgaactt gtattcggtg ggcgcccccg ccatctcgac cttcgagacg
     1981 tagcgcggcg cgccgctctc gtagccggcg gtggggagca gcgcgagctc cagccgcgac
     2041 agcgcgcgca gcgagatctg gccgttgaag ccgaagatga cgccgccgcc gcgccgcaga
     2101 tcgaacgacg acgacagcca gaacgtcagc ggccgccggg gatcggtggc gacctcgccg
     2161 gagagacccg cgct
//
LOCUS       DASSYW010000393         2605 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1490617, whole genome shotgun sequence.
ACCESSION   DASSYW010000393 DASSYW010000000
VERSION     DASSYW010000393.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2605)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2605)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2605
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1490617"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(292..672)
                     /locus_tag="VFN38_06280"
     CDS             complement(292..672)
                     /locus_tag="VFN38_06280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011403.1"
                     /translation="MLRTLPLALAGALLFGALAAAVARFGGTRWAGVACAAAVVAVAL
                     AGASRIGTGNPYSRTARYDPLLFFVMVAIFLTPSTLAAAWAAAGADPATGVLRATLWS
                     ALLFLLALPVGFVAAVAVEVLWPH"
     gene            890..1501
                     /locus_tag="VFN38_06285"
     CDS             890..1501
                     /locus_tag="VFN38_06285"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HET9011404.1"
                     /translation="MGTDHLTVRRALEGDERALRALWSQHAPHIDAVVRRLVGDDDAA
                     ADIAQEVWIQIFRALPSYRGDAQFGTWAHRIAVNRTLNALRRTRRLAKLETEIEEDVA
                     SVEPEGERNLLMQSIEEAARQLAPGARTVFLLHDVEGYTHEEIAESLGITAGGSKSQL
                     FKARAKLRRLLAHLVDSPPSPGLAARGAAVTTGTDRTHVTPIC"
     gene            1482..2345
                     /locus_tag="VFN38_06290"
     CDS             1482..2345
                     /locus_tag="VFN38_06290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011405.1"
                     /translation="MSHLSAERLAALADASPATTDEAAHLASCAHCAEERDAHRRLAA
                     MALDERSRLAPPLTDWSSLSAALRAEGLIDESAARRERATSPVSAPGAGRASSVRPLF
                     SSRAGLRVAAALLLVAGGAAFGRASAGVRPVPGFAVAPTVAAGEGEGEGASQLAELPG
                     RMLDTVRSAGASLVADTTATFRSTTDALVALAKAEQQYQLAAAFLLEHDSASGMSGAR
                     TRAIDDSSSVYRMRLAALDNVMAASREALYEAPHDPVINRYYLATLGAREATLRQLNT
                     ALPAGARLARY"
     gene            2402..>2605
                     /locus_tag="VFN38_06295"
     CDS             2402..>2605
                     /locus_tag="VFN38_06295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011406.1"
                     /translation="MKLSTSLIVTLVSSAVACAVPLHAQDTTGQAPAAPERSARQARA
                     ARAEAQIERLRRELDDLERRRMDA"
BASE COUNT          408 a          928 c          968 g          301 t
ORIGIN      
        1 gttcgcgtgg cgagcgtcag cagctaaccg ccgctcccat cacagttcaa gacgaatcgg
       61 aggcccgatg gtcactccga ccgggcgccg ctctccggca gacaataagt ccgacaccac
      121 ggaaaaatca atcggaaaat cggagagcgg atcgtcgggc cgtggggcgc gacggggggc
      181 cggtgtcgtc gccgcgagac acggatggcg caaaaaggcg acagggcggc gggtgaggaa
      241 gcccacttcg tggcgggggt gcgatggcgg cgcgctccgc ccggcttcct ctcagtgcgg
      301 ccagagcacc tcgacggcga ccgcggcgac gaagccgacg gggagcgcca gcaggaagag
      361 cagggcgctc cagagcgtgg cgcgaaggac gccggtggcc gggtcggcgc cggccgcggc
      421 ccaggcggcg gcgagggtgg agggcgtcag gaagatcgcc accatcacga agaagagcag
      481 cgggtcgtag cgcgccgtgc gcgagtaggg attgcccgta ccgatgcgcg acgccccagc
      541 gagagcgacg gcgacgacgg cggccgcgca ggccaccccg gcccaccgcg tcccaccgaa
      601 ccgggcgacg gcggccgcga gggccccgaa gagcagggcg ccggcgagag cgagggggag
      661 ggtgcggagc atgggcaggg gagaagaaaa tcgtgcgcgg ggcacgtagg caatggtaat
      721 gacgggggta ggcggtgggc ggtgggcggt ggacgactgg aggggcgtga gaggtgagat
      781 ggccggtgcc tgccatcatc catctcacgc tcttctcgcc gaccgtccac cgcccaccgt
      841 ccccacggca acccttctcc ctcttcccgt gacatacccg gcagacccca tgggaacgga
      901 tcatctcact gtccggcgtg cgctcgaagg cgatgagcgg gcactgcgag cgctctggtc
      961 gcagcatgcc ccgcacatcg acgccgtcgt gcgccggctg gtgggggacg acgacgcggc
     1021 ggccgacatc gcgcaggagg tctggatcca gatcttccgc gccctgccga gctaccgggg
     1081 cgacgcgcag ttcggaacgt gggcccatcg catcgcggtg aaccggacgc tcaacgcgct
     1141 gcgccgcacc cgccgactgg cgaagctcga gaccgagatc gaggaggacg tcgcgtcggt
     1201 cgagcccgag ggggagcgca acctgctgat gcagagcatc gaggaagcgg cgcggcagct
     1261 cgcgcccggc gcacgaacgg tcttcctcct gcacgacgtg gaggggtaca cgcacgaaga
     1321 gatcgccgaa tcgctcggca tcacggcggg cggatcgaaa tcacagctct tcaaggcgcg
     1381 cgcgaagcta cgccggttgc tcgcgcacct ggtcgactcg ccgccgagcc ccgggctcgc
     1441 cgcgcggggg gccgccgtca ccaccggcac ggatcgcaca catgtcacac ctatctgctg
     1501 agcggctggc ggcgctcgcc gacgccagcc ccgcgacgac cgacgaagcc gcgcacctgg
     1561 cgagctgcgc gcactgcgcc gaggagcgcg acgcccaccg ccgcctcgcg gcgatggcgc
     1621 tcgacgaacg ctcgcgcctc gctcccccgc tcaccgactg gtcgtcgctc agcgccgcgt
     1681 tgcgcgccga gggactgatc gacgagagcg cggcgcggcg ggagcgggcg acgtcgccgg
     1741 tgtcggcgcc gggcgcggga cgcgcctcga gcgtgcggcc actcttctcg tctcgcgccg
     1801 gcctgcgggt ggccgcggcg ctgctcctcg tcgccggagg cgccgccttc ggccgggcga
     1861 gcgccggggt ccgcccggtg ccgggcttcg cggtcgcgcc caccgtcgcc gcgggagagg
     1921 gggagggaga gggcgcgagt cagctcgccg agctgcccgg tcggatgctc gacacggtgc
     1981 gctcggccgg cgccagcctc gtggccgaca cgaccgccac cttccgctcg acgaccgacg
     2041 cgctcgtcgc cctcgcgaag gccgagcagc agtaccagct cgcggccgcc ttcctcctcg
     2101 agcacgacag cgcgtcgggg atgagcggcg cacggacccg cgcgatcgac gacagctcgt
     2161 cggtctaccg gatgcgtctc gccgcgctcg acaacgtgat ggcggcgtcg cgcgaagcgc
     2221 tgtacgaggc gccgcacgac ccggtcatca atcgctacta cctggccacg ctcggcgccc
     2281 gcgaggcgac gttgcggcag ctcaacacgg cgctgccggc gggcgcccgg ctcgcccgct
     2341 actagctccg ggtacccgcg tcccgatcac cgcacgattc cgtagtgctc acaccatgtc
     2401 catgaagctc tcgacctcgc tgatcgtcac cctcgtctcc agtgccgtcg cgtgcgcggt
     2461 gccgctgcat gcccaggaca cgacggggca ggcaccggcg gcgccggagc gcagcgcgcg
     2521 ccaggcgcga gcggcacggg cggaggcaca gatcgagcgg ctgcgccgcg agctcgacga
     2581 cctcgagcgc cggcggatgg acgcc
//
LOCUS       DASSYW010000394         3185 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1376051, whole genome shotgun sequence.
ACCESSION   DASSYW010000394 DASSYW010000000
VERSION     DASSYW010000394.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3185)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3185)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3185
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1376051"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..868)
                     /locus_tag="VFN38_06300"
     CDS             complement(<1..868)
                     /locus_tag="VFN38_06300"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:NF013015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006261 - DNA-templated DNA replication
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HET9011407.1"
                     /translation="MPTRRILLVDADAFFVAVARMVDPEGAGKAPLLIVGGAPGGRGV
                     VCSASYETRKFGVRSAMPISRALRLCPDAMCVPVPGAACRRKHREIRAVLERFAPVVQ
                     AASIDEWYLDLGGTEALYDHASLDTIAHQIRDAVLAGTGLSVSIGGGTSKLVAKLAVE
                     RAKPKTGATGVHVVPPGEELAFMRQLTLADIPGIGPKTTARLAERGLRTVEDVLALDA
                     AALGRLVGPRDAEWLAERVRGVDEAEVEERDVAKSISRDETFDTDIHDDLLLEGELTE
                     LVGRAAAELRSEG"
     gene            1252..1704
                     /gene="rplM"
                     /locus_tag="VFN38_06305"
     CDS             1252..1704
                     /gene="rplM"
                     /locus_tag="VFN38_06305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HET9011408.1"
                     /translation="MVKTFSATPSDIQQDWYVVDAEGMVLGRLATEIARIIRGKHKPM
                     FTPHMDTGDGVIVINASKVRVTGRKAEQKEYFRHTGYMGHERFTPFASMLAKHPERVI
                     EKAVFGMLPKTALGRQVLRGKLRVYPGAEHPHTAQSPKTLTFPKAEAK"
     gene            1708..2103
                     /gene="rpsI"
                     /locus_tag="VFN38_06310"
     CDS             1708..2103
                     /gene="rpsI"
                     /locus_tag="VFN38_06310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HET9011409.1"
                     /translation="MPDTQITHTIGRRKEAVCRVYLKPGSGKWDINGRTLGDYFPRPA
                     LVTSIQQPFTATDRLGQYDVKANVNGGGQSGQAGALRLAVARALVKIDETHRRKLRDL
                     GLLTRDARAVERKKPGRPKARKRFQFSKR"
     gene            2297..>3185
                     /gene="rpsB"
                     /locus_tag="VFN38_06315"
     CDS             2297..>3185
                     /gene="rpsB"
                     /locus_tag="VFN38_06315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HET9011410.1"
                     /translation="MPETLPKLEDLLTAGVHFGHQTRRWNPKMRRFIFAERNGIHIID
                     LQKTLRQIEIAQKLVRDVVMRGESVLFVCTKPQVAGIVKSEAERAGAMYITERWLGGL
                     LTNFQTVKKQLRRLKELDAGSAEGGEWANYTKKERLMMTREKEKLSKYLNGIRTLTRT
                     PGLMFVVDAKKEKIAVAEANKLGIPIISIVDTNADPDLITVPIAGNDDAIRSVELITK
                     AIADTIAEARLAAPVRAEAEEGNEGGMTYSSDRGMEPAAGGEDERKRRRRPRRRRAKP
                     EAIAARLKGGVGEAGEGTEG"
BASE COUNT          549 a         1150 c         1048 g          438 t
ORIGIN      
        1 gcccctcgct gcgcagctcc gcggcggcgc gtcccaccag ctccgtcagc tcgccttcca
       61 gcagcaggtc gtcgtggatg tcggtgtcga aggtctcgtc gcgactgatg ctcttcgcca
      121 cgtcccgctc ctcgacctcc gcttcgtcca cgcctcgcac tcgttccgcc agccattccg
      181 cgtcgcgcgg ccccacgagc cggccgagcg ccgccgcgtc gagggccagc acgtcctcca
      241 ccgtgcgcag gccgcgctcg gccagccgcg cggtggtctt gggcccgatg ccggggatgt
      301 cggcgagggt gagctgccgc atgaaggcca gctcctcgcc cgggggcacg acgtgcaccc
      361 cggtggcgcc cgtcttgggc ttcgcgcgct ccaccgccag cttggcgacg agcttggacg
      421 tccccccgcc gatcgagacc gacagccccg tcccggccag gaccgcatcg cggatctggt
      481 gggcgatggt gtcgagcgac gcatggtcgt agagcgcctc cgtgccgccg aggtcgaggt
      541 accactcgtc gatgctggcg gcctggacca ccggcgcgaa tcgctcgagg accgcccgaa
      601 tctcccggtg cttgcgccgg catgcagcac ccggcacggg gacgcacatc gcatccgggc
      661 agagtcggag tgcgcgtgat atcggcatcg ccgaccggac gccgaacttc cgagtctcgt
      721 aggaagccga gcagaccacg ccacgacctc cgggcgcgcc gccgacgatc aggagaggcg
      781 ccttgcccgc gccctcggga tcgaccatgc gcgccaccgc cacgaagaag gcgtcggcat
      841 cgacgagcag gatccgtcgc gtgggcatgg ggagaagata gggcgctccg gcgcgctgcg
      901 cgcgctcatg gggaacggcg ggcgtggaac gcccgcctat ggggcgctgc catccgtcgc
      961 tgcgcgacgg tggcttgctc atggggcggc cgagcggctt cgccgccggc ctcatggcag
     1021 ccgcgcccca taagcgcagc gccccatgag ggccgcgggc tacgcccgcc ggcccgcccc
     1081 ataagcgcag cgcccccgca agagagctaa ccgtctgtcg cagcggcggt tgaccgacgg
     1141 gcgccgcccc ggtagcttat gagtctgccc caaaacgcct tcgatggcgg ccgagacccg
     1201 ggttgcatta cgcaccggtg aggcgcaggt cccatttcga gtgttcaggt catggtcaaa
     1261 acgttcagcg cgacgccgag cgacatccag caggactggt atgtcgtcga cgccgagggc
     1321 atggtcctcg ggcgcctcgc gaccgaaatc gcgcgcatca tccgcggcaa gcacaagccg
     1381 atgttcacgc cgcacatgga caccggcgac ggcgtcatcg tcatcaacgc ctccaaggtt
     1441 cgcgtcaccg gccgcaaagc ggagcagaag gagtacttcc gccacaccgg ctacatgggc
     1501 cacgagcggt tcacgccgtt cgccagcatg ctcgcgaagc accccgagcg cgtgatcgag
     1561 aaggccgtgt tcggcatgct ccccaagacg gccctcggcc gtcaggtact ccgcggcaag
     1621 ctgcgagtgt accccggcgc cgagcacccg cacaccgccc agagccccaa gacgctgacc
     1681 ttcccgaaag ccgaggcgaa gtaacacatg cccgacacgc agatcacgca cacgatcggc
     1741 cgccgcaagg aagccgtctg ccgcgtctac ctgaagcccg gttcgggcaa gtgggacatc
     1801 aacggccgga cgctcggtga ctacttcccg cgccccgcgc tcgtcaccag catccagcag
     1861 ccgttcacgg ccacggatcg cctgggccag tacgacgtga aggcgaacgt gaacgggggc
     1921 gggcagagcg gccaggccgg cgcccttcgt ctcgccgtcg ctcgcgcgct cgtgaagatc
     1981 gacgagacgc accgccgcaa gctgcgcgac ctcggcctcc tgacgcgcga tgcgcgggcg
     2041 gtcgagcgca agaagccggg ccgtccgaag gctcgcaagc gcttccagtt ctccaagcgg
     2101 tagagcggtt cggcggtctg gcggtctgcc gccagaccgc catgccgcca tgccgccgta
     2161 ccgtttcacc gctctaccgc cttaccgctt taccgcacca cccatctctc acgcgtcccg
     2221 agtttccgcc cggtgccggc ttgccggtgg gcggagatga cgacggatcg cggacgacca
     2281 accaaccgga tgcaccatgc ctgagaccct gcccaagctc gaagacctgc tgaccgcggg
     2341 tgtccatttc ggacaccaga cgcgccggtg gaatcccaag atgcgccgct tcatcttcgc
     2401 cgagcgcaac gggatccaca tcatcgacct ccagaagacc ctccgccaga tcgagatcgc
     2461 gcagaagctc gtgcgcgacg tcgtaatgcg cggcgagagc gtcctcttcg tctgcaccaa
     2521 gccccaggtg gccggcatcg tcaagtccga agccgagcgc gccggcgcga tgtacatcac
     2581 cgagcgctgg ctcggtgggc tcctcaccaa cttccagacg gtcaagaagc agctgcgccg
     2641 cctgaaggag ctcgacgccg gttcggccga gggcggtgag tgggcgaact acacgaagaa
     2701 ggagcgtctg atgatgacgc gtgagaagga gaagctgtcc aagtacctca acggtatccg
     2761 gacgctcacg cgcaccccgg ggctcatgtt cgtcgtggac gcgaagaagg agaagatcgc
     2821 cgtcgccgag gccaacaagc tcggcatccc gatcatctcc atcgtcgaca ccaacgcgga
     2881 tccggacctc atcaccgtgc cgatcgccgg caacgacgac gcgatccgct cggtcgagct
     2941 gatcacgaag gcgattgccg acacgatcgc cgaagcgcgc ctcgccgcgc cggtccgtgc
     3001 cgaggccgaa gagggcaacg aaggtggcat gacgtacagc tccgaccgcg gcatggagcc
     3061 cgccgctggt ggcgaagacg agcggaagcg gcgtcgtcgt ccgcgtcgtc gtcgcgcgaa
     3121 gccggaagcc atcgcggccc gcctcaaggg cggtgtgggt gaagccggcg aaggcaccga
     3181 gggcg
//
LOCUS       DASSYW010000395         2215 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_692431, whole genome shotgun sequence.
ACCESSION   DASSYW010000395 DASSYW010000000
VERSION     DASSYW010000395.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2215)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2215)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2215
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_692431"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..508)
                     /locus_tag="VFN38_06320"
     CDS             complement(<1..508)
                     /locus_tag="VFN38_06320"
                     /inference="COORDINATES: protein motif:HMM:NF025861.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 97 N-terminal
                     domain-containing protein"
                     /protein_id="HET9011411.1"
                     /translation="MSKTIWRGAARSAALVMFAATGAWGQAPLRLMSPDGRTAISVAI
                     REGHLTYDVRRDARAVLTPSRLGFELRGGPALRDGLRITGHSERTHDETWTQPWGEVA
                     RVRDHHNEMRVEVEEANAPNRRFSVIFRAFDDGLGFRYELPAQPGFGDYEISDELTEF
                     AFADNGRAW"
     gene            619..1056
                     /locus_tag="VFN38_06325"
     CDS             619..1056
                     /locus_tag="VFN38_06325"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HET9011412.1"
                     /translation="MSSFLASARRSTPLALLLLSACASSKEPRPEAAPATVTADQIQQ
                     APGDPIEKLLMSRSPGVWVGRSADGGIAVRIRGGSSLMGNNEPLYIVDGSPFMPGPNG
                     ALTGINPYDIASIKVLKDPADLTMYGVRGANGVIIIKTKNKQD"
     gene            complement(1053..>2215)
                     /locus_tag="VFN38_06330"
     CDS             complement(1053..>2215)
                     /locus_tag="VFN38_06330"
                     /inference="COORDINATES: protein motif:HMM:NF024907.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="VCBS repeat-containing protein"
                     /protein_id="HET9011413.1"
                     /translation="GRGHFRKTASNLPYESASGSRVVPGDYDGDGAIDLFVGGRVVPG
                     HYGIDPASMLLRNDGRGKFTDVTAVAAPELAHVGMVTDAVWRDVDRDGRLDLVVVGEW
                     MPITIFRNVGGGKLKKLAVPGLEKSNGWWNRIVAGDFDGDGRVDFVVGNLGLNGRLHA
                     SPAEPTTMYVKDFDGNGFAEQIISCYNGGVSYPLTLRDDLIRALPSLKARYPSYKSYA
                     RQTVTDIFSPSELAGAVLKTAYTFATSLAHNNGDGSFTLIPLPDDAQIAPVYGILATD
                     VDRDGHTDLLLAGNFDGFKPEMGRMSASYGLLLRGDGKGAFAPVRAPESGFSVPGQAR
                     DIQRVRSAGGELIVVARNDDRPLVFRPARATRLAAGRRAGTTPSRLPADAVR"
BASE COUNT          328 a          817 c          726 g          344 t
ORIGIN      
        1 accacgcacg cccgttgtcg gcgaacgcga actccgtcag ctcgtccgag atctcgtagt
       61 ccccgaagcc cggctgcgcg ggcagctcgt agcgaaagcc gagtccgtcg tcgaatgcgc
      121 gaaagatcac gctgaagcgg cggttcggcg cattcgcctc ttccacctcg acgcgcatct
      181 cgttgtggtg gtcgcgcacc cgcgccacct caccccacgg ctgcgtccag gtctcgtcgt
      241 gcgtccgctc gctgtggccg gtgatgcgca gcccatcgcg cagcgccggt cctccccgga
      301 gctcgaaccc gagccgcgac ggcgtgagca cggcgcgcgc atcgcgccgg acgtcgtacg
      361 tcaggtgccc ctcgcggatc gccaccgaga tcgccgtgcg gccgtccggc gacatgaggc
      421 gaaggggcgc ctgcccccag gcgccggtgg cggcgaacat cacgagtgcg gcagagcgcg
      481 cggcgcccct ccagatggtc ttcgacatcg gcttctccgt cggtgaggtt cttccctgcc
      541 tcgctggcga gcgcgacttg actcggcgcg gattgcggcc cattaactac gctgcgactt
      601 caaccaacgg tgctccccat gtcgtccttc ctcgcgtccg cgcggcgttc gacgccgctc
      661 gctctccttc tgctctcggc gtgcgccagc tccaaggagc cgcgccccga agcggcgccc
      721 gccaccgtca ccgccgacca gatccagcag gcccccgggg acccgatcga gaagctcctg
      781 atgagccggt cgcccggggt atgggtcggg cgcagcgcgg acggcgggat cgccgtgcgc
      841 atccgcggcg gctcgtcgct catgggcaac aacgagccct tgtacatagt cgacggcagc
      901 ccgttcatgc caggacccaa tggagcgctg acgggaatca atccctacga catcgcctcc
      961 atcaaggtgc tgaaggatcc ggccgacctc acgatgtacg gcgttcgcgg cgcgaacggc
     1021 gtcatcatca tcaagaccaa gaacaagcag gactagcgca ccgcatcggc ggggaggcgg
     1081 ctcggcgtcg tgccggcccg cctcccggcc gccagtcgtg tggcgcgcgc tggccggaac
     1141 accagcgggc ggtcgtcgtt gcgggcgacg acgatcagct caccacccgc cgagcggacg
     1201 cgctggatgt cccgcgcctg gcccgggacc gagaagccgc tctccggcgc ccgcaccggc
     1261 gcgaacgcgc ccttgccgtc gccgcgcagc agcagcccgt agctcgcgct catccgcccc
     1321 atctccggct tgaagccgtc gaagttgccg gcgagcagga gatccgtgtg accgtcgcgg
     1381 tccacgtccg tggccaggat gccgtacacc ggggcgatct gtgcatcgtc ggggagcggg
     1441 atcagcgtga atgagccgtc gccgttgttg tgcgcgagcg aggtggcgaa ggtgtacgcg
     1501 gtcttcagca ccgcgcccgc cagctcgctc ggcgagaaga tgtccgtcac cgtctgccgt
     1561 gcgtagctct tgtagctcgg ataacgcgcc ttcagcgacg gaagcgcgcg aatgaggtcg
     1621 tcccgcagcg tgagcggata gctcaccccg ccgttgtagc aggagatgat ctgctcggcg
     1681 aagccgttcc cgtcgaagtc cttcacgtac atcgtcgtcg gctcggccgg tgaggcgtgc
     1741 aggcgcccgt tcagcccgag attcccgacg acgaagtcga cgcgcccgtc gccgtcgaag
     1801 tcgccggcga cgatgcggtt ccaccagcca ttgctcttct ccagccccgg cacggcgagc
     1861 ttcttcagct tcccgccgcc cacgttgcgg aagatcgtga tcggcatcca ctcgccgacg
     1921 accacgaggt cgagccggcc gtcgcgatcc acgtcgcgcc acaccgcgtc ggtcaccatg
     1981 cccacatggg ccagctccgg cgccgccacg gcggtcacgt cggtgaactt gccgcggccg
     2041 tcgttgcgga gcagcatgct cgccgggtcg atcccgtagt gccccggcac cacgcgtccg
     2101 cccacgaaca ggtcgatggc gccgtctccg tcgtaatcgc ccggcacgac ccgcgagccg
     2161 ctcgccgatt cgtacggcag gttgctcgcc gtcttgcgga agtggccccg gccgt
//
LOCUS       DASSYW010000396         2171 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1808176, whole genome shotgun sequence.
ACCESSION   DASSYW010000396 DASSYW010000000
VERSION     DASSYW010000396.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2171)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2171)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2171
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1808176"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..999
                     /locus_tag="VFN38_06335"
     CDS             <1..999
                     /locus_tag="VFN38_06335"
                     /inference="COORDINATES: protein motif:HMM:NF018452.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1254 domain-containing protein"
                     /protein_id="HET9011414.1"
                     /translation="GKGGKYLLLPPGYTGDVPDGYFTSSSRTFGNFLCARGFLVSGDP
                     RPAVESVKQHLRVYPLAAEADPPPMTFIDVSGEPFNTIAASDASLFDDVAQVVQDEPL
                     EAVDAETRGLLASVGIRKGTPFAPNARMQRILAEAAAVGNATARALLFDTRDPDASFY
                     PHSAWETAWIGGWDFSRDGVLDLDARTRLFYVGWGVTPAMTVQMVGIGSQYAVANRDA
                     AGQYLDGAKSYRLHLPPNIPAKDFWSILVYDPQTRSMLQTDQRFPSLSSQSESVVTNP
                     DGSVDVYFGPESRTGKEANWIQTIPGKGWYVGLRLYGPLEPWFDKTWRPGEIELVD"
     gene            1017..1571
                     /locus_tag="VFN38_06340"
     CDS             1017..1571
                     /locus_tag="VFN38_06340"
                     /inference="COORDINATES: protein motif:HMM:NF014373.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MgtC/SapB family protein"
                     /protein_id="HET9011415.1"
                     /translation="MLSETDLIILWRAALAAALGLLIGWERQVTGSAIKARTIGLAAL
                     TAASLTALGHEIFATGTDRIVQGIVTGIGFLGAGVIIHGTSGEVRGLTTAATMWAMTG
                     VGLAVGSGHELLGVLLAVLIYVIIASGEWPVLTWLRRRSSGTAAEAANQRLGPASPVE
                     VGAMPGSENGPLSRKTASTATEHR"
     gene            1568..1984
                     /locus_tag="VFN38_06345"
     CDS             1568..1984
                     /locus_tag="VFN38_06345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011416.1"
                     /translation="MMLLPDTLGAMLGGPGRMRFLLQPLIAIALGIRDGRRDAAAGRP
                     PYGFAVLFVHGTRKEEVMTGLRTLAKPLVVAVLLDAILQYVILRSVRVWHALLAGTIL
                     IALPYAAARGLTNRYVQHRRPRRPDAQPGQLARPRQ"
     gene            complement(1978..>2171)
                     /locus_tag="VFN38_06350"
     CDS             complement(1978..>2171)
                     /locus_tag="VFN38_06350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HET9011417.1"
                     /translation="YDGVRVALEAPITDAVRATLTEMGHVLIEQPPIAFGGAQAIVRL
                     PRGYAAASDPRKDGMAVGY"
BASE COUNT          328 a          764 c          726 g          353 t
ORIGIN      
        1 ggcaaaggcg ggaagtatct gctgctcccg cccggctaca cgggcgacgt ccccgacggg
       61 tacttcacct cgagctcgcg caccttcggg aacttccttt gcgcccgtgg cttcctcgtg
      121 agcggcgacc cgcggcctgc ggtggagagc gtcaagcagc acttgcgcgt ctacccgctc
      181 gccgccgagg cggacccgcc gccgatgacc ttcatcgacg tctccggaga gccattcaac
      241 acgattgccg ccagcgacgc ttcgctcttc gatgacgtcg cgcaggtggt ccaggatgag
      301 ccactggagg cggtcgacgc ggagacgcgc ggcctgctcg cgtccgtcgg cattcggaag
      361 ggaacgccgt tcgcgcctaa cgcacgcatg cagcgcatcc tggccgaggc ggccgcagtc
      421 ggcaacgcga ccgctcgcgc gctgcttttc gacacacgcg atcccgacgc ctccttttac
      481 ccgcacagcg cctgggagac ggcctggatc ggcggctggg atttctcgcg cgacggcgta
      541 ctcgacctcg acgcgcggac gcgtctgttc tacgtgggct ggggcgtgac cccggcgatg
      601 accgtgcaga tggtcggcat cggctcccag tacgccgtgg ccaatcgcga tgcggccggg
      661 cagtacctcg acggcgcgaa gagctaccgg ctgcacctgc cgcctaacat tccggcgaag
      721 gacttctggt cgatcctcgt ttacgacccg cagacgcgct cgatgctgca gaccgaccag
      781 cgtttcccga gcctcagcag tcaatcagag agcgtcgtca ccaacccgga cggctcggtg
      841 gatgtctact tcggcccgga gtcgcgcacc ggcaaggagg caaactggat ccagactatc
      901 cccggcaagg gttggtacgt cggcctacgc ctctatgggc cgctcgagcc gtggttcgac
      961 aagacctggc ggcccggcga gatcgagctg gtcgactagg ctgagaggga gtgaccgtgc
     1021 tctcggaaac cgatctgatc atcctctggc gcgcagcgct ggccgccgct ctcggcctcc
     1081 tcattggctg ggagcggcag gtcaccggtt cggccatcaa ggcccgtacg atcgggctcg
     1141 ccgcgctgac ggccgccagc ctaacggcgc tcggtcacga gatcttcgcc accggcaccg
     1201 atcgcatcgt gcagggcatc gtgaccggca tcggctttct cggtgcgggc gtgatcatcc
     1261 acggcacgag cggtgaggtg cgcggcctaa cgacggcggc caccatgtgg gcaatgaccg
     1321 gtgtcggcct ggccgtcggc tctggacacg agctgctcgg cgtgctgctc gctgtgctca
     1381 tctacgtcat catcgcatcg ggggaatggc ctgtcctcac gtggctccgc cggcgatcct
     1441 cggggacggc ggccgaagca gccaaccagc gcctcgggcc agcgtctccg gtcgaggtag
     1501 gcgccatgcc tggcagtgag aacgggccgt tgtcgaggaa gaccgcgtcc acagcgacgg
     1561 agcaccgatg atgcttctgc cggacacgtt aggcgcgatg ttgggcgggc cgggaagaat
     1621 gcgcttcctc ctgcagccac tcatcgccat cgccctgggc atccgggacg gccggcggga
     1681 cgcagccgcc gggcgacctc cctacgggtt cgctgtcctc ttcgtgcacg gcacgcgcaa
     1741 ggaagaggtg atgacggggc tcaggacgct ggccaagccg ctcgtcgtcg ccgtgctgct
     1801 cgacgcgatc ctgcagtacg tcatcctccg ctcggtccgg gtctggcacg cgctgctggc
     1861 cggcacgatc ctgatcgcgc tgccttacgc ggccgcgcga gggctgacga accggtacgt
     1921 gcagcaccgc cgcccgcgcc ggccagacgc gcaacccggc caactagcgc ggccgcgtca
     1981 gtagccgacc gccatcccgt ccttgcgcgg atcgctcgcc gccgcgtagc ccctgggcag
     2041 tcgcacgatc gcctgcgctc cgccgaacgc gatcggtggc tgctcgatga gcacatggcc
     2101 catctcggtg agcgttgcgc gcacggcgtc ggttatcggc gcctcgagcg cgacgcgcac
     2161 cccgtcgtaa t
//
LOCUS       DASSYW010000397         2004 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1511730, whole genome shotgun sequence.
ACCESSION   DASSYW010000397 DASSYW010000000
VERSION     DASSYW010000397.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2004)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2004)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2004
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1511730"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..612
                     /locus_tag="VFN38_06355"
     CDS             <1..612
                     /locus_tag="VFN38_06355"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF013509.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HET9011418.1"
                     /translation="GVPQTDEEKTLYAVGLVMARSLRQFDMNPAEVEFIRRAIADALA
                     GKPAVGLDEWGPKIQALVNERGARIVAREKEAAAAYLAKAAAAAGAVKTESGIVYTET
                     TAGTGVSPTAADRVKVHYRGTLTNGTEFDSSYSRNEPAVFPLGGVIRCWTEGVQKMKV
                     GGKARLVCPSDLAYGDRGNEEIPGGAALIFEIELLEISAAPGN"
     gene            729..>2004
                     /locus_tag="VFN38_06360"
     CDS             729..>2004
                     /locus_tag="VFN38_06360"
                     /inference="COORDINATES: protein motif:HMM:NF019135.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component regulator propeller
                     domain-containing protein"
                     /protein_id="HET9011419.1"
                     /translation="MLRRTLVLLALCCAAQSRATAGPVTRGLDDFTVRTWNENDGLSV
                     SRITTITQDHDGYLWLGTDAGLVKFDGVRFVPVTDLGGVKLPVAPIPALLSASDRSLW
                     IGTVGPYGLARLRHGRITQYGVDRGLRPGYVITLLEDRDGVLWAGNASGLFRFDGDRW
                     HQVTDPALSGSSVLALHQSRDGSLWVATRSSGVRRHGSDGAFALMDTFDIASNAWQGF
                     SEDERGAVWISDFRQGFRRVGAKPSRNTTPRGWGVQLLHDRRGNFWVATRGQGLWRVR
                     EGADGTPSVELLTRHHGLATEAVQCVFEDREGNVWVGTQAGLQRLTPHRVTPVTDLPI
                     ARATAITPDGSIWIGNTRGLTRFTPAGRRHYGEAEGLPGSVVLATQVDRAGVLWVSTE
                     RGIARFANEHFSPLVVRSGTRIPRIFSLVHDGS"
BASE COUNT          302 a          698 c          713 g          291 t
ORIGIN      
        1 ggtgttccac aaaccgacga agaaaaaacc ctctatgccg tcggcctggt gatggcccgc
       61 tcgctgcggc agttcgacat gaacccggcg gaagtcgagt tcatccggcg cgccatcgcc
      121 gacgccctgg ccggcaagcc cgcggtgggg ctcgacgagt ggggcccgaa gatccaggcg
      181 ctggtcaacg agcgcggcgc gcgtatcgtg gcgcgggaaa aggaagccgc cgcggcgtat
      241 ctcgcgaagg ccgcggccgc ggccggcgcc gtgaagaccg aatcggggat cgtctacacc
      301 gagacgacgg ccggcacggg cgtctcgccc acggcggccg accgcgtgaa ggtgcactac
      361 cgcggcacgc tgaccaacgg caccgagttc gacagctcct actcgcgcaa cgagcccgcg
      421 gtctttccgc tcggcggcgt gatccgctgc tggaccgagg gcgtgcagaa gatgaaggtg
      481 ggcggcaagg cgcgcctggt ctgcccctcg gacctcgcct acggcgatcg gggcaacgag
      541 gagattcccg gcggtgccgc gctgatcttc gaaatcgagc tcctggaaat ctcggccgcg
      601 cccggcaatt gatccgctga cgcctcgatg gggccggtct gaagaccggc ggctacaaaa
      661 cgcgactacc ccgttgtagg tagacgcgcg gtcggttgac ctggggcaga atctcggtct
      721 cccgaaccat gcttcgacga acgctcgtcc tgctggcgct gtgctgtgcg gcgcagtcgc
      781 gcgccaccgc cggccccgtc acacgcggtc tcgacgactt caccgtccgc acctggaacg
      841 agaacgacgg cctgtcggtg agccggatca ccaccatcac gcaggatcac gacggctacc
      901 tctggctcgg caccgacgcc ggcctggtga agttcgacgg cgtgcggttc gtgcccgtca
      961 ccgatctcgg cggcgtgaag cttccggtcg cgccgatccc cgcgttgctc agcgcgtcgg
     1021 atcgcagcct gtggatcggc accgtggggc cgtacggtct cgcccgcctg cggcacggcc
     1081 gcatcacgca gtacggcgtc gatcgcggcc tgcgtcccgg ctacgtgatc acgctgctcg
     1141 aggaccgcga cggcgtgctg tgggcgggga acgcctcggg gctcttcagg ttcgatggcg
     1201 atcgctggca ccaggtgacc gatcccgcgc tctcgggctc cagcgtgctg gcgctgcacc
     1261 agtcacgcga cggcagcttg tgggtggcga cgcgatcgtc cggcgtccgg cggcacggca
     1321 gcgacggcgc gttcgcgctg atggacacct tcgacatcgc cagcaacgcc tggcaggggt
     1381 tcagcgaaga cgaacgcggc gcggtctgga tcagcgactt ccgccaggga ttccggcgcg
     1441 tcggcgccaa gccgtcgcgc aacacgacgc cgcgcggctg gggcgtgcag ctgctccacg
     1501 atcggcgcgg caatttctgg gtggcgacgc gcgggcaggg gctgtggcgc gtccgcgagg
     1561 gcgccgacgg cacaccgtcg gtggagctcc tcacgcgaca ccacgggctc gccaccgagg
     1621 ccgtgcagtg cgtgttcgag gatcgcgaag gcaacgtgtg ggtgggcacg caggcggggc
     1681 tgcagcggct gacgccgcac cgcgtcacgc ccgtcacgga cctcccgatc gcgcgggcga
     1741 cggcgatcac gccggacggc agcatctgga tcggcaacac gcgcggcctc acgcgcttca
     1801 cgccggcggg acggcggcac tacggagaag ccgaggggct gccgggctcc gtcgtcctgg
     1861 ccacgcaggt ggatcgcgcg ggcgtgctct gggtgtccac cgaacgcggc atcgcgcgct
     1921 tcgcgaacga acacttctcg ccgctggtcg tccgctcggg caccaggatt ccgcgcatct
     1981 tctccctcgt ccacgacggg tcct
//
LOCUS       DASSYW010000398         4365 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_890038, whole genome shotgun sequence.
ACCESSION   DASSYW010000398 DASSYW010000000
VERSION     DASSYW010000398.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4365)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4365)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4365
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_890038"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1730)
                     /locus_tag="VFN38_06365"
     CDS             complement(<1..1730)
                     /locus_tag="VFN38_06365"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HET9011420.1"
                     /translation="MNPIARASRRSATALLVALAASALWSSAGAQLTRRGIVAERDVR
                     RLLTTLAADSMEGRATGTRGSARAATFIAEEMRRMGLEPAGDSGYFQRVPVAVTTQSR
                     TMPNGTVVTRTRPTLFPSFAALDSVPVERRRTAVNVVGLIRGSDPVLRDSVVLVDAHY
                     DHLGVGAPVGGDSIYNGADDDASGVVAVLESARAMAAGPAPKRTVLFVATTGEEVGLL
                     GTRWFIDHPVVPLSRLVANLEIEMIGRPDSLAGGPGRAWLTGYERSTMGPTFAAAGLP
                     VVADRRLDQQFFMRSDNIAFAQKGIPAHTLSSYNMHGDYHRPSDDASGVDFEHMTAVV
                     RATAAATRLLADGPAPQWNPGGRPTVALAPRPTTPTPLPVNPPQLQAATPAERLGRYT
                     TVRLAPDTTSLTRWERRMLPLLVDAAREMHGVYWTQAFGSRDSLLRNIPQADVRRLAE
                     INVGPWDRLDDNAPFVPGTGPKPKGANFYPRDMTREEFERETAGGGARADSLKSLYTM
                     VRRDASGRLAAIPYSRFFSAANERAAIKLRQAASLAEDAGLRRYLTLLATSLTTDRYR
                     PSDLAWMDMKR"
     gene            1885..2466
                     /locus_tag="VFN38_06370"
     CDS             1885..2466
                     /locus_tag="VFN38_06370"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HET9011421.1"
                     /translation="MIQRRTRNRIALFAVPLAIGLVFGLGALRTPATDGTLTLEASIG
                     AKKLTVRKDGEIVKQYDVAVGKDGHPTPTGQFSIQKIVWNPAWVPPDAKWARGKSAKA
                     PGHPANPMKLVKIFWKEPDYYIHGTGDLESLGSAASHGCLRMDPDEAGEVALMVMENA
                     GQFRDWDWVKGILHIGEQRTVRLATPTPILVAP"
     gene            2547..2810
                     /locus_tag="VFN38_06375"
     CDS             2547..2810
                     /locus_tag="VFN38_06375"
                     /inference="COORDINATES: protein motif:HMM:NF016141.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HET9011422.1"
                     /translation="MDLLTWVIVGLVAGVLASLVMGGTGYGIIGDIIIGIVGAFVGGW
                     LFRSLGVTSPMGGLAGVIFVAFIGAIVLIFILRLIRGGRSRRV"
     gene            complement(3033..3533)
                     /locus_tag="VFN38_06380"
     CDS             complement(3033..3533)
                     /locus_tag="VFN38_06380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011423.1"
                     /translation="MAGAPLTIRLARRRDGAVVFELRRADGTTTWQKREGPTAEFFAV
                     HDLTHYAVETELGVRRAFYGLVAEGWALSDFGTPWPRGPLPAEALPAEVIVGCFDTAR
                     AAHEPLTAEACNGTVAGYFATAGLPPPAPLTEEALGRVRARLSDLVWRWHAVAPGQSL
                     ELHFPG"
     gene            complement(3538..4194)
                     /gene="can"
                     /locus_tag="VFN38_06385"
     CDS             complement(3538..4194)
                     /gene="can"
                     /locus_tag="VFN38_06385"
                     /inference="COORDINATES: protein motif:HMM:NF007756.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004089 - carbonate dehydratase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0015976 - carbon utilization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbonate dehydratase"
                     /protein_id="HET9011424.1"
                     /translation="MTDIPELFAKNRAWAAAMIRNDPGFFSRLIAQQAPKYLWIGCSD
                     SRVPANEIVGLLPGEMFVHRNVANVVVHTDLNCLTVMQYAVDVLKVEHILVTGHYGCG
                     GVRAALDDRRYGLIDNWLRHVQDVAQQHEAELAGLAGEELVDRLCELNVAEQVLNTAR
                     STVVQDAWDRQQPLSIHGCIYGLHDGIMRDLNATVSNLPEVGALAHRLHAGTYPSAVG
                     "
BASE COUNT          642 a         1479 c         1610 g          634 t
ORIGIN      
        1 cgcttcatgt ccatccacgc gaggtcgctc ggccggtagc ggtcggtggt gagcgaggtc
       61 gccaacaggg tcaggtagcg gcgcaggccg gcgtcctccg ccaggctggc ggcctggcgc
      121 agcttgatgg cggcgcgctc gttggcggcc gagaagaagc gcgagtacgg gatggcggcc
      181 aggcggcccg acgcatcacg ccggaccatc gtgtacaggg acttcaggct gtcggcgcgg
      241 gccccgccgc cggccgtctc gcgctcgaac tcctcccgcg tcatgtcccg cgggtagaag
      301 ttcgccccct tgggcttcgg tccggttccc gggacgaagg gcgcgttgtc gtcgaggcgg
      361 tcccatggcc ccacgttgat ctcggccagc cgccgcacat cggcctgcgg gatgttccgc
      421 agcagggagt cccggctgcc gaacgcctgc gtccagtaga cgccgtgcat ctcgcgcgcg
      481 gcatccacca gcagggggag catgcggcgc tcccagcgcg tgaggctggt cgtgtccggc
      541 gccagccgca ccgtggtgta gcggcccagc cgctcggccg gagtggcggc ctggagctgt
      601 ggcgggttca cgggcagggg cgtcggcgtc gtgggtcgcg gcgccagcgc caccgtggga
      661 cggccgcccg gattccactg cggggcgggc ccgtcggcca gcagccgcgt cgcggcggcg
      721 gtggcgcgga ccaccgccgt catgtgctcg aagtcgaccc cggaggcgtc gtcgctcggc
      781 cggtgatagt cgccgtgcat gttgtacgac gacagcgtgt gcgccgggat ccccttctgc
      841 gcgaaggcga tgttgtcgct ccgcatgaag aactgctggt cgagccgccg gtcggcgacg
      901 acgggaaggc ccgccgcggc gaaggtcggg cccatcgtgg agcgctcgta gccggtgagc
      961 caggcacggc ccggcccccc ggcgagcgaa tccggccggc cgatcatctc gatctcgaga
     1021 ttcgcgacga ggcgcgacag tggcacgacg gggtggtcga tgaaccaccg cgtgccgagc
     1081 aggcccacct cctcgccggt cgtcgccacg aacaggacgg tgcgcttcgg cgcgggaccg
     1141 gcggccatgg cgcgcgccga ctccagcacg gccacgacgc cggaggcgtc gtcgtccgcg
     1201 ccgttgtaga tcgagtcgcc tcccaccggc gcgcccacgc cgaggtggtc atagtgggca
     1261 tccaccagca ccacggagtc gcgcagcacc ggatcgctgc cgcggatcag gcccaccacg
     1321 ttcaccgcgg tgcggcggcg ctccaccggc accgagtcga gggcggcgaa gctggggaag
     1381 agcgtcggcc gggtacgggt caccaccgtg ccgttcggca tcgtgcggga ctgcgtggtg
     1441 accgccaccg ggacgcgctg gaagtagccg ctgtcgccgg ccggctcgag acccatgcgc
     1501 cgcatctcct cggcgatgaa ggtggcggcc cgggcggagc cacgggtgcc ggtcgcgcgg
     1561 ccctccatcg aatcggctgc gagcgtggtg agcaggcggc gaacgtcgcg ctcggcgacg
     1621 attccgcggc gggtgagctg cgcgccggcg gagctccaga gggcggacgc ggccagggcc
     1681 acgagcagcg ccgtcgcgga acgacgcgag gcgcgagcga tcgggttcat caggagaggc
     1741 gggaaagagg aaggtgtact cgaaagttcc gtccgatgcg acaatatcgc tcccggggag
     1801 cgggcgctac aggccagagg ccgtggaacg tggcttgccc atgtgtttac aactccaatt
     1861 ccgccaccct cacgacacgg tcgcatgatc cagagacgta cacgcaacag gatcgctctg
     1921 ttcgccgtcc ccctcgccat cggcctcgtc ttcgggctgg gcgccctccg cacccccgcc
     1981 acggacggca cgctgaccct ggaggccagc atcggcgcca agaagctgac ggtgcgcaag
     2041 gatggggaga tcgtgaagca gtacgacgtg gcggtgggca aggacggcca ccccacgccc
     2101 accggccagt tcagcatcca gaagatcgtc tggaacccgg cctgggttcc ccccgacgcc
     2161 aagtgggccc gcggcaagtc cgccaaggca cctggtcacc cggccaatcc gatgaagctc
     2221 gtgaagatct tctggaagga gccggactac tacatccacg gcaccggcga cctcgagtcg
     2281 ctgggctccg cggcctcgca tggctgcctc cggatggacc ccgacgaggc gggggaggtg
     2341 gcgctcatgg tgatggagaa cgccgggcag ttccgggatt gggactgggt gaaggggatc
     2401 ctgcacatcg gcgagcagcg cacggtccgg ctcgcgaccc ccactccgat cctggtcgcg
     2461 ccctgaccgg gaaaaccaac ctcgtccatg gcatgtgagt tgccgcgttt tgcgggctct
     2521 ccattccccc tcctgaggaa catgacatgg atctgctcac ctgggtcatc gtcgggctgg
     2581 tggccggcgt gcttgcctcg ctggtgatgg gcgggacggg ctacggcatc atcggcgaca
     2641 tcatcatcgg gatcgtgggc gcgttcgtgg gcggctggct gttccgcagc ctcggcgtca
     2701 cctcgcccat gggcgggctg gcgggggtga tcttcgtcgc cttcatcggc gccatcgtgc
     2761 tgatcttcat cctgcggctg atccgcggag gacgaagccg ccgggtgtga ctgcggtcct
     2821 ccgttctctg cgtccgctgt agatcgcacg cagtccccag cgccctccgt ggctcgaatg
     2881 caggtgactg ctcgaaccgc ggaggactct gagggcgcgg aggacgacga acggcgggac
     2941 gacgagttgg gcgtgaatca ccttccgctc cacgaccggc ggttcgggca ttcgcatcgt
     3001 caggccgcgc gaacggtccc cgggcccgac gctcaaccgg gaaagtgcag ctcgagcgac
     3061 tggcccggcg cgaccgcgtg ccagcgccac acgaggtcgg acaggcgcgc acgcacgcgg
     3121 cccagcgcct cttcggtgag cggtgccggc ggcggcaggc cggcggtggc gaagtagccg
     3181 gcgaccgtcc cgttgcacgc ctcggcggtg agcggctcgt gcgcggcgcg agcggtatcg
     3241 aagcagccga cgatgacctc cgccgggagc gcctccgcgg gcaggggtcc gcgcggccat
     3301 ggcgtgccga agtccgacag agcccacccc tcggcgacga gaccgtagaa cgcgcggcgg
     3361 acaccgagct cggtctcgac ggcgtagtgc gtgaggtcgt gcacggcgaa gaactcggcc
     3421 gtcggtccct cgcgcttctg ccaggtggtc gtgccgtcgg cgcggcgcag ctcgaacacc
     3481 acggcgccgt cgcggcgccg ggcgaggcgg atggtgagcg gcgcccccgc caccggctca
     3541 gccgacggcg gaggggtagg tgccggcgtg caggcggtgg gcgagcgcac ccacctcggg
     3601 gagattcgac acggtggcgt tcaggtcgcg catgatgccg tcgtgcaggc cgtagatgca
     3661 gccgtggatc gagagcggct gctgccggtc ccacgcatcc tgcaccacgg tggagcgtgc
     3721 cgtgttgagc acctgctccg cgacgttcag ctcgcacagg cggtcgacca gctcctcgcc
     3781 ggcgagcccc gccagctcgg cctcgtgctg ctgggcgacg tcctggacgt ggcgcagcca
     3841 gttgtcgatg aggccgtagc gccggtcatc gagcgccgcg cgcactccgc cgcagccgta
     3901 gtggccggtg acgaggatgt gctccacctt gagcacgtcc accgcatact gcatcacggt
     3961 gaggcaattg agatcggtgt gcaccacgac gttggccacg ttgcggtgca cgaacatctc
     4021 tccgggcagg aggcccacga tctcgttcgc cggcacccgg ctgtcggagc agccgatcca
     4081 caggtacttg ggcgcctgct gggcgatgag ccgcgagaag aacccgggat cgttccggat
     4141 catcgcggcc gcccaggctc gattctttgc gaacagttcc gggatatcgg tcatgcgcgg
     4201 ggacgggcga ggcgaccgac ggagatcaat cggccgaggt gaaggtgatg tcggtgtcga
     4261 tcggcttgcc gtggcgccag acgccggtgc cgctgcgcgg agcggtcacg acctcgaagc
     4321 gtacctcgag gtcctggggc gcgtcggcga aggtgggccg caggt
//
LOCUS       DASSYW010000399         2408 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1462109, whole genome shotgun sequence.
ACCESSION   DASSYW010000399 DASSYW010000000
VERSION     DASSYW010000399.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2408)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2408)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2408
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1462109"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2408)
                     /locus_tag="VFN38_06390"
     CDS             complement(<1..>2408)
                     /locus_tag="VFN38_06390"
                     /inference="COORDINATES: protein motif:HMM:NF037660.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HET9011425.1"
                     /translation="LADDRNALGHALNVLAAARWREGDLEQAQRLFQDALQRGTSTTD
                     PRLHVDVTTNLGSLAKIRGDFREALRYYQDALAHGRRHSLLDNIVGTLNNLGIANMEL
                     GRLDAAEDAFTEALTIANALGGLSLRIELEVNFAMLAIERRDFEEAKRRCDQGMSLAA
                     HLGDSRANAEAEKVYGIIARETGDLVAAEQHLHRARTMGAAVRDLALEGDASRELAEL
                     YGRLGRNRETLQALNRAHVCFTMLRARHELADVGRRMARLEGDFLDVVRKWGESIESK
                     DVHTQGHCERVADLAGALAAKAGLDETSLFWFRIGALLHDVGKLIIPADVLNRAGQLN
                     EEEWALVRQHPEAGERMLADVQFPWDVSPMVRSHHERWDGKGYPDGLAREAIPLAARI
                     LCVADVYDALTTERSYKRAFSHIEAMEIMRREVGRQFDPELFVKFEELVRRGAVRTPP
                     AAQRAMPARSTGAIGAVMVSEEDDLTGALVRRAFVNVTAAVLAERRRTGAPLSLLVVD
                     VDQFKAVNDTYGHLTGDDALRLVVGVIQEQLRPGQYVGRYAGDEFVVLLPGYDAASAR
                     VFAEEIRRTTAALPIPPREPTGQPMSVTLSIGVATAPVHGETFESLFTSADRALFEAK
                     RGGRDTVVVASTGNEGPPQLSFNRFVGRTSELRALVSALDESGRGGPQGRLVIGEAGV
                     GKSTLVRQLLPEVRLRGAALVTGRALETENRPLYGPWAEVVLGLHEMGLAPARPWPLL
                     ERLVPALHGAGGPALPLTLDPGHGHQLLQELVSFLRMTSEARPLTLVLEDMHWADTAS
                     WDAL"
BASE COUNT          340 a          902 c          816 g          350 t
ORIGIN      
        1 cagcgcgtcc cagctcgcgg tgtccgccca gtgcatgtcc tcgagcacga gcgtgagcgg
       61 tcgcgcctcg ctcgtcatgc gcaggaacga gacgagctcc tgcagcagct gatggccgtg
      121 ccccgggtcc agcgtcaggg gcagcgcggg cccaccggcg ccgtgcagcg cgggcaccag
      181 gcgctccagc aacggccacg gtcgcgccgg cgccagtccc atctcgtgca ggccgagcac
      241 gacctccgcc cagggaccgt agagcgggcg attctcggtc tccagcgccc gacccgtcac
      301 cagcgccgcg ccgcgcagcc ggacttccgg cagcagctgc cgcaccagcg tggacttccc
      361 caccccggcc tcgccgatga ccaggcggcc ctgcggtccc ccgcgcccgc tttcgtcgag
      421 cgccgacacg agggcccgca gctcgctcgt gcggcccacg aaccggttga acgagagctg
      481 cggcggcccc tcgttccccg tgctggccac caccacggta tcacgcccgc cccgcttcgc
      541 ctcgaacagc gcgcgatcgg ccgacgtgaa gagcgactcg aacgtctcgc cgtgcaccgg
      601 cgcggtggcc acgccgatcg agagcgtgac cgacatcggc tgcccggtcg gctcgcgtgg
      661 cgggatcggc aacgcggccg tcgtgcggcg gatctcctcg gcgaagacgc gcgccgatgc
      721 ggcatcgtag ccgggcagga gcaccacgaa ctcgtcgccg gcgtagcggc cgacgtactg
      781 accgggccgc agctgctcct ggatcacgcc cacgacgagg cgcagcgcgt cgtcgccggt
      841 gaggtggccg tacgtgtcgt tcaccgcctt gaactggtcc acgtccacca cgagcagcga
      901 cagcggcgcg cccgtgcgcc ggcgctcggc cagcaccgcc gcggtgacgt tcacgaacgc
      961 ccggcggacc agcgcacccg tgagatcgtc ctcctcggag accatcacgg cgccgatggc
     1021 gcccgtgctc cgggccggca tggcgcgttg tgcggcgggt ggcgtgcgca cggctccgcg
     1081 gcgcacgagc tcctcgaact tcacgaacag ctccggatcg aactgcctcc ccacctcgcg
     1141 acgcatgatc tccatcgctt cgatgtggga gaacgcgcgc ttgtagctgc gctccgtcgt
     1201 cagcgcgtca tagacgtcgg ccacgcacag gatgcgcgcc gccaggggaa tcgcctcgcg
     1261 cgcgagccca tccgggtagc ccttgccgtc ccagcgctcg tgatggctgc gcaccatcgg
     1321 cgagacgtcc cacggaaatt gcacgtcggc gagcatccgc tcccccgctt cggggtgctg
     1381 gcggacgagc gcccactcct cctcgttcaa ttgccccgcc cgattgagaa cgtcggcggg
     1441 gatgatcagc ttgcccacgt cgtgcagcag cgcgccgatc cggaaccaga agagcgacgt
     1501 ctcgtccagt cccgccttgg ccgccagcgc gccggccaga tccgccacgc gctcgcagtg
     1561 gccctgggtg tggacgtcct tcgactcgat cgactcgccc cacttgcgca cgacgtcgag
     1621 gaagtcgccc tcgaggcgcg ccatgcggcg ccccacgtcg gccagctcgt gccgcgcacg
     1681 cagcatggtg aagcagacgt gcgcccggtt cagcgcctgg agcgtctcgc ggttgcggcc
     1741 gagccgtccg tacagctcgg ccagctcgcg gctcgcatcg ccttccagcg cgaggtcgcg
     1801 gacggctgca cccattgtgc gcgcgcgatg caggtgctgc tcggcggcca cgaggtcgcc
     1861 cgtctcgcgg gcgatgatgc cgtagacctt ttccgcctcc gcgttggcgc gcgagtcgcc
     1921 gagatgcgcc gccagcgaca tgccctgatc gcagcggcgc ttcgcctcct cgaagtctcg
     1981 ccgctcgatg gcgagcatgg cgaagttgac ctcgagctcg atgcgcagcg acagtccgcc
     2041 gagcgcgttc gcgatcgtca acgcctcggt gaacgcatcc tcggccgcat cgaggcgccc
     2101 gagctccatg ttggcgatgc cgaggttgtt cagcgtgccg acgatgttgt cgagcagcga
     2161 atgacgccgg ccgtgcgcga gcgcgtcctg gtagtagcgg agagcctcac ggaagtcgcc
     2221 gcgaatcttg gcgagggagc cgagattcgt cgtgacgtcc acgtgcaacc gcggatcggt
     2281 cgtgctcgtg ccgcgctgga gcgcgtcctg gaagagccgt tgcgcctgct ccaggtcacc
     2341 ttcgcgccag cgggcggccg cgaggacgtt gagggcgtga cccagcgcgt tccggtcgtc
     2401 cgccagct
//
LOCUS       DASSYW010000400         2904 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1014858, whole genome shotgun sequence.
ACCESSION   DASSYW010000400 DASSYW010000000
VERSION     DASSYW010000400.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2904)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2904)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2904
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1014858"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..502)
                     /locus_tag="VFN38_06395"
     CDS             complement(<1..502)
                     /locus_tag="VFN38_06395"
                     /inference="COORDINATES: protein motif:HMM:NF026042.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011426.1"
                     /translation="MSAPASKPETKSGHTFRRFKDGDHEWRSAQEQIFKADETDKCPT
                     YVHKTPPCQASCPSGEDIRGWLNIVRGVEKPPKGALMQGYAFQRLTDANPFPSMMGRV
                     CPAPCQTGCNRNHVEDYVGINAVEQYICDYALSQNFAFEAGPDTGKRVAIVGGGPAGL
                     SAAYQLR"
     gene            complement(525..2015)
                     /locus_tag="VFN38_06400"
     CDS             complement(525..2015)
                     /locus_tag="VFN38_06400"
                     /inference="COORDINATES: protein motif:HMM:NF024581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HET9011427.1"
                     /translation="MAAFETPALGEYPVIPLVLEGAMAHSKPFVAKPEHQQGLGFPGT
                     LVPGWEKAAVDKLGELVSKSRALQVFLDACVKCGACTDKCHYYLGTGDPKNMPVARQD
                     LLRSVYRRYYTFAGKHFPRLVGARDMTKSVLDDWYAYYHQCSQCRRCSVFCPYGIDTA
                     EVSMAARDIMDSVGLGQKYSNEIIGKVHKIGNNLGLPEPALRDTLDGLEEDVKEATGV
                     DVRFPLDEKGAEVLLVAPSADFFAEPHIDGLIGYAKVFHAAGISWTLSSHASEAANFS
                     LFIGNHDNLQKVAQRIRDAALELGVRRIVVGECGHAWRVAYSFWNTLIGPFDFLDPRY
                     PAPQHICEVTHDLIRRGAITLDKSANADKVVTFHDSCNVSRASRMGDVPGGQFAIPRE
                     IIRACVDRFVDMAPETIGETTFCCGGGGGLLTDDLVELRVKGALPRMQALRQVVDEHG
                     VNYMAAICAICKSQFTKVLPYYDHPMDMIGSVHGLVSNAIVLGPKP"
     gene            complement(2017..2766)
                     /locus_tag="VFN38_06405"
     CDS             complement(2017..2766)
                     /locus_tag="VFN38_06405"
                     /inference="COORDINATES: protein motif:HMM:NF014695.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="respiratory nitrate reductase subunit gamma"
                     /protein_id="HET9011428.1"
                     /translation="MSALTVLYALLFYAATVVLVAGVAYRSWVYARTPQPLKIPIPPA
                     PTTRRGVALRLLVEVTLFRALFRSNKWIWLLGWTFHVALLVVLLRHLRYFTEPVWTWV
                     ALIQPLGVYAGFAMLAGLAGLWARRFLVDRVRYISAPSDHLMLALLVAIAASGLAMKY
                     VAHTDIVALKAFILGLMAFEWHPLPADPVLLVHLTLVAALMIVFPVSKLLHAPGVFFS
                     PSLNQVDDAREQRHTAGWSAQIGHDVRPAGR"
BASE COUNT          461 a          963 c         1012 g          468 t
ORIGIN      
        1 ggcgcagctg gtaggccgcc gacaggcccg ccggaccgcc gcccacgatc gctacgcgct
       61 tgccggtgtc gggaccggcc tcgaaagcga agttctgcga cagcgcgtag tcgcagatgt
      121 actgctcgac cgcgttgatg ccgacgtagt cctcgacgtg attgcgattg cagccggtct
      181 ggcacggtgc cgggcacacg cgccccatca tcgaggggaa cgggttggcg tcggtgagcc
      241 gctggaacgc gtacccctgc atgagcgcgc ccttcggcgg cttctcgacg ccgcgcacga
      301 tgttgagcca gccgcgaatg tcctcgcccg acgggcagct cgcctggcag ggaggcgtct
      361 tgtgcacgta ggtcgggcac ttgtcggtct cgtcggcctt gaagatctgt tcctgcgccg
      421 agcgccattc gtggtcgccg tccttgaacc ggcgaaacgt gtgtccgctc ttcgtctcgg
      481 gcttgctggc aggtgccgac atcgctatct ccgtttgcgc cggttcacgg cttgggcccc
      541 agcacgatcg cgttgctcac gaggccgtgc acgctgccga tcatgtccat cggatggtcg
      601 tagtagggca gtaccttggt gaactggctc ttgcagatgg cgcagatcgc ggccatgtag
      661 ttgacgccgt gttcgtccac cacctggcgc agcgcctgca tgcgcggcag cgcgcccttg
      721 acgcgcagct cgaccaggtc gtcggtgagc agcccgccgc cgccgccgca gcagaacgtg
      781 gtctcgccga tggtctcggg cgccatgtcg acgaaccggt cgacgcacgc gcggatgatc
      841 tcgcgcggga tggcgaactg cccgccgggt acgtctccca tgcgcgaagc gcgcgacacg
      901 ttgcaggaat cgtggaacgt caccaccttg tcggcgttgg cgctcttgtc gagcgtgatc
      961 gccccgcggc ggatgagatc gtgggtgact tcgcagatgt gctgcggcgc cgggtagcgc
     1021 gggtcgagga agtcgaacgg cccgatcagc gtgttccaga agctgtacgc gacgcgccac
     1081 gcatggccgc actcgccgac cacgatgcgc cgcacgccga gctccagcgc agcgtcgcgg
     1141 atgcgctgcg ccaccttctg caggttgtcg tggttgccga tgaacagcga gaagttggcc
     1201 gcctcggacg cgtgcgacga cagcgtccag gagatgccgg cggcgtggaa gaccttggcg
     1261 tagccgatca gcccgtcgat gtgcggctcg gcgaagaagt cggcgctggg cgcgacgagc
     1321 agcacctcgg cacccttctc gtccagcggg aacctgacgt ccacgccggt cgcttccttc
     1381 acgtcctcct cgaggccgtc gagcgtgtcg cgcagcgccg gctcgggcag gccgaggttg
     1441 ttgccgatct tgtggacctt gccgatgatc tcgttcgagt acttctggcc caggccgacg
     1501 ctgtccatga tgtcgcgtgc ggccatcgag acctcggccg tgtcgatgcc gtagggacag
     1561 aacaccgagc agcgccggca ttgcgagcac tggtggtagt acgcgtacca gtcgtcgagg
     1621 accgacttgg tcatgtcgcg cgccccgacc agccgcggga aatgcttgcc cgcgaacgtg
     1681 tagtaccggc gatagaccga gcgcagcagg tcctggcgcg cgaccggcat gttcttcgga
     1741 tcgccggtgc cgaggtagta gtggcacttg tcggtgcagg cgccgcactt gacgcacgcg
     1801 tccaggaaca cctggagcgc gcgcgacttc gacacgagct cgcccagctt gtcgacggcg
     1861 gccttctccc agccgggcac cagcgtgccc gggaaaccca gtccctgctg atgctcgggc
     1921 ttggcgacga acggcttgct gtgcgccatc gccccctcga gcaccagcgg gatcaccggg
     1981 tactcgccga gcgcgggcgt ttcgaaggcg gccacgtcaa cgccccgccg gccgaacgtc
     2041 gtggccgatc tgcgccgacc agccggcggt gtggcgctgc tcgcgcgcgt cgtcgacctg
     2101 gttgaggctc gggctgaaga acacgccggg ggcgtgcagc agcttgctga ccgggaagac
     2161 gatcatcagc gccgccacca gcgtcaggtg gaccagcagc accggatcgg cgggcagcgg
     2221 atgccattcg aaggccatca ggccgaggat gaatgccttg agcgcgacga tgtcggtgtg
     2281 cgcgacgtat ttcatcgcta gcccactcgc cgcgatggcc accagcagcg cgagcatcag
     2341 gtggtccgac ggggcgctga tgtaccgcac gcgatcgacc aggaagcgtc gcgcccaaag
     2401 cccggcgagg ccggccagca tcgcgaatcc cgcgtacacg ccgagcggct ggatcagcgc
     2461 cacccaggtc cagaccggct cggtgaagta gcgcaggtgg cgcagcagca ccaccaggag
     2521 cgcgacgtgg aacgtccacc cgaggagcca gatccacttg ttggatcgga acagggcacg
     2581 gaacagcgtg acctcgacca gaaggcgcag cgcgacgccg cggcgcgtgg tcggcgccgg
     2641 cgggatggga atcttcagcg gctgcggcgt ccgcgcatag acccagctcc tgtaggccac
     2701 gccggcgacg agcacgacgg tggccgcgta gaagagcagc gcgtagagga cggtcagcgc
     2761 cgacaatgat cgctccggcg tacggccgcg gcgggcggct ttagacgcaa ccggtcggct
     2821 tcggcaaccc cgcgtacttg cacgcctgct tggcggggcc gtacgggaac agctcgtaga
     2881 ggtacttgct gttgcccttg tcgg
//
LOCUS       DASSYW010000401         3265 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1603292, whole genome shotgun sequence.
ACCESSION   DASSYW010000401 DASSYW010000000
VERSION     DASSYW010000401.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3265)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3265)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3265
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1603292"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1077)
                     /locus_tag="VFN38_06410"
     CDS             complement(<1..1077)
                     /locus_tag="VFN38_06410"
                     /inference="COORDINATES: protein motif:HMM:NF020892.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HET9011429.1"
                     /translation="MSTYFLTTAIDYANGEPHVGHAYEKIGADVIARYRRLRGERVHF
                     LIGMDEHGQKVEQTAAQQGVTPQALVDALADTFCAMWTRLGISYDQFIRTTDRMHRDG
                     VKALIERIFERNPDDFYEKAYEGLYCVGCESFKQDAEIVDGKCVLHPTRTLERVQERN
                     WFFRLSRYEEFLRRLLTERPQSLQPESRRNEMLALIDRGLEDVSASRSRLQWGIPFPK
                     PLSSGETQTTYVWFDALPNYLTATGFPQGEWEARWPAQLHIVGKDITRFHAIIWPAML
                     EAAQVPLPDRVWGHGFVLLGGERFSKSAGVKLDLNEAIDRFGPDAFRYFLLREVPFDN
                     DGTFSWERFEERYTADLANALGNLA"
     gene            complement(1078..2280)
                     /gene="ricT"
                     /locus_tag="VFN38_06415"
     CDS             complement(1078..2280)
                     /gene="ricT"
                     /locus_tag="VFN38_06415"
                     /inference="COORDINATES: protein motif:HMM:NF041131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="regulatory iron-sulfur-containing complex
                     subunit RicT"
                     /protein_id="HET9011430.1"
                     /translation="MSVLVEVAFKGNRKEFFFWAADEAPPRATAVIVDADRGEDLGRV
                     HAVGGEAEFRSAKVPHGLFGAPATRPVKRIASAEDVRRHAELRASDDEARRKAMERVK
                     ANALVMKMTDAEWQWDRKKLTFYFTAEKRVDFRTLVRELASMFRTRIELKQIGVRDEA
                     KRLDGIGRCGRQYCSASWLPELRPVNLGVAKDQRLSLNPSQISGACGRLMCCLRYEHD
                     FYVQSRRKYPKEGKIVKTAAGEEKVVANDIFRERVTLRSPEGEMRTILLAELRDEMAA
                     AGDPLTGMLEAAARETIVTPAPDDLDEPIDLDAAVTEERPIVRMAPPPRSAPRPPAAP
                     APSRPAPSTAAPDPATPAAAPGAEGEKRTQRRRGRRGGRRNRPSGGTTPPTTPDAPHA
                     GDNGSDGA"
     gene            complement(2282..3244)
                     /locus_tag="VFN38_06420"
     CDS             complement(2282..3244)
                     /locus_tag="VFN38_06420"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit alpha"
                     /protein_id="HET9011431.1"
                     /translation="MATATLEFEKPIFELEKQIDELKKLADEQQLDVGKEIAPLEAKL
                     VELREEIYKSLTPLQRVQVARSNKRPLTEDYLRLCFTDFIELHGDRAFREDAAIIGGW
                     ARLDGETVMVIGHQRGRDTKENLKRNFGMPHPEGYRKALRLMKLAEKFHVPVITFIDT
                     PGAWPGLGAEERGQSEAIARNLFEMSLLETPIIATVIGEGGSGGALALGVADRVNMLE
                     NAVYSVISVEGAAAILWKDGKLENRERAATALRITAPDLFELRVIDEIIPEPPGGAHA
                     NHDATAAALQEVLLRQLDDLRRLKPDKLTRRRREKFLRMGQYVE"
BASE COUNT          433 a         1141 c         1131 g          560 t
ORIGIN      
        1 cgccaggttg cctaacgcat tcgccaggtc ggccgtgtag cgctcctcga accgctccca
       61 cgagaaggtg ccgtcgttgt cgaagggcac ctcgcgcagc aggaagtagc ggaaggcatc
      121 gggcccgaag cggtcgatcg cctcgttcag gtcgagcttg acccccgccg acttgctgaa
      181 ccgctcgccg ccgaggagga cgaatccgtg tccccacacg cggtcgggca gcggcacctg
      241 ggccgcctcg agcatggccg gccagatgat ggcgtgaaag cgggtgatgt ccttgcccac
      301 gatgtgcagc tgcgccggcc agcgcgcctc ccactcgccc tgcgggaagc cggtggccgt
      361 gaggtagttc gggagcgcgt cgaaccagac gtaggtcgtc tgcgtctcac ccgagctgag
      421 cggcttgggg aaggggatgc cccactggag ccgcgaccgg ctggcggaga cgtcctcgag
      481 cccgcggtcg atgagcgcga gcatctcgtt gcggcgactc tccggctgga gggactgcgg
      541 ccgctccgtg aggaggcggc gcaggaactc ctcgtagcgg ctgagccgga agaaccagtt
      601 gcgctcctgc acccgctcga gcgtgcgcgt ggggtgcagt acgcacttgc cgtccacgat
      661 ctcggcgtcc tgcttgaacg actcgcagcc gacgcagtac agcccttcgt acgccttctc
      721 gtagaagtcg tccgggttgc gctcgaagat gcgctcgatg agcgccttca cgccgtcccg
      781 atgcatccgg tccgtcgtcc ggatgaactg gtcgtaggag atgccgagcc gcgtccacat
      841 cgcgcagaag gtgtcggcga gcgcgtcgac gagggcctga ggcgtgacgc cctgctgcgc
      901 cgcggtctgc tccaccttct ggccatgctc gtccatcccg atcaggaagt ggacacgctc
      961 gccccggagc cggcggtacc gcgcgatgac gtcggcgccg atcttctcgt acgcgtggcc
     1021 cacgtgcggc tcgccgttgg cgtagtcgat cgcggtggtg aggaagtacg tgctcaatta
     1081 cgctccgtcg gagccgttgt cgcccgcgtg tggcgcgtcg ggcgtcgtgg gcggggtggt
     1141 tcccccactc gggcgattgc ggcggccacc gcgccggcca cgccgccgct gggtgcgttt
     1201 ctctccctcc gcgcccggcg ctgcggcggg cgtggccgga tcgggcgccg cggtgctcgg
     1261 cgccgggcgc gagggggcag gcgccgcggg agggcgcggg gcgctccgcg gtggcggcgc
     1321 catgcgcacg atggggcgct cttccgtgac tgccgcatcg aggtcgatcg gctcgtccag
     1381 gtcgtccggt gccggcgtca cgatagtctc gcgcgccgcc gcctcgagca tgccggtgag
     1441 cggatcaccc gcagcggcca tctcgtcgcg cagctcggcg aggaggatcg tgcgcatctc
     1501 gccctcgggc gaccgcaggg tgacgcgttc gcggaagatg tcgttggcga cgaccttctc
     1561 ctcgcccgcc gccgtcttca cgatcttccc ttccttggga tacttgcgcc ggctctgcac
     1621 gtagaagtcg tgctcgtagc gcaggcagca catcagccgt ccgcacgcgc cggagatctg
     1681 cgacggattg agcgagagcc gctggtcctt ggccacgccg aggttcaccg gccggagctc
     1741 gggcagccac gacgccgagc agtactgtcg tccgcagcgg ccgatgccgt cgaggcgctt
     1801 cgcctcgtcg cgcacgccga tctgcttcag ctcgatgcgc gtgcggaaca tcgacgccag
     1861 ctcgcgcacc agcgtccgga agtccacgcg cttttccgcg gtgaagtaga aggtgagctt
     1921 cttccggtcc cactgccact ccgcgtccgt catcttcatg acgagggcgt tcgccttgac
     1981 gcgctccatc gccttgcggc gggcctcgtc gtcgctggcg cggagctcgg catgacgccg
     2041 cacgtcctcc gccgaggcga tccgcttcac cggccgggtg gctggcgcgc cgaacagccc
     2101 gtgcggcacc ttggccgacc tgaactcggc ctcgccgccg acggcgtgca cgcgcccgag
     2161 gtcctccccg cggtcggcgt cgacgatcac cgccgtggcg cgcggtggcg cctcgtcggc
     2221 cgcccagaag aagaactcct tgcggttgcc cttgaacgcg acctcgacga gtacgctcac
     2281 gctactcgac gtactgcccc atccgcagga acttctcgcg gcgacggcgg gtgagcttgt
     2341 cgggcttgag gcggcgcagg tcgtcgagct gccggaggag cacctcctgc agtgcggcgg
     2401 cggtggcgtc gtggttcgcg tgcgctccac ccggcggctc ggggatgatc tcgtcgatca
     2461 cgcgcagctc gaagaggtcg ggcgccgtga tgcggagcgc cgtggcggcg cgctcgcggt
     2521 tctccagctt gccgtccttc cacaggatcg cggcggcgcc ttccacgctg atcaccgagt
     2581 agaccgcgtt ctccagcatg ttcacgcggt cggcgacgcc gagcgccagc gcgccgcccg
     2641 agccaccctc gccgatcacc gtggcgatga tcggcgtctc gaggaggctc atctcgaaca
     2701 ggttgcgggc gatggcctcg ctctgtcccc gctcttcggc gccgagtccc ggccaggcac
     2761 ccggcgtgtc gatgaaggtg atgaccggca cgtggaactt ctcggccagc ttcatcaggc
     2821 gcagcgcctt gcggtagccc tcggggtggg gcatgccgaa gttgcgcttg aggttctcct
     2881 tggtgtcccg gccacgctga tggccgatga ccatcaccgt ctcgccatcc aggcgcgccc
     2941 agccgccgat gatcgccgcg tcctcgcgga aggcgcgatc accgtgcagc tcgatgaagt
     3001 cggtgaagca cagccggaga tagtcttcgg tgagggggcg cttgttgctg cgcgccacct
     3061 gcacccgctg gagcggcgtg aggctcttgt agatctcctc acgcagctcc acgagcttgg
     3121 cctcgagcgg ggcgatctcc ttgcccacgt ccagctgttg ctcgtcggcg agcttcttca
     3181 gctcgtcgat ctgcttctcc agctcgaaga tcggcttctc gaactccagg gtcgcagtcg
     3241 ccatccgtgt cagctcccgc gcacg
//
LOCUS       DASSYW010000402         2526 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1789897, whole genome shotgun sequence.
ACCESSION   DASSYW010000402 DASSYW010000000
VERSION     DASSYW010000402.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2526)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2526)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2526
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1789897"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..231)
                     /locus_tag="VFN38_06425"
     CDS             complement(<1..231)
                     /locus_tag="VFN38_06425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011432.1"
                     /translation="MIPLTALPHPVARGDSRTSRMISRASTAEAVVGRVSALVVSAAH
                     SRLGSGDRTPRRSLAVVLTLAFASMGRLVAWAL"
     gene            complement(307..1524)
                     /locus_tag="VFN38_06430"
     CDS             complement(307..1524)
                     /locus_tag="VFN38_06430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HET9011433.1"
                     /translation="MDDALYFSEQHLAVREMVRQFARDEVAPVAAKLDADSIFPWENV
                     RKMGELGLLGVPWSEDLGGAGLDLLSYMITIMELAKVDASTGLTVSAHTTLGTSPIVH
                     FGTEEQKRRYVPFLASGKVLGGFGLTEPDAGSDAGGTRTTAVRHGNCYRLNGTKRFLT
                     HGSVGEIFIVTAVTDPAQGTRGISSFILTKHTNDLAKVRDLGVGHEPSLPAMPGFRAG
                     KKEDKLGWRASDTAELIMEDVEVPAENLLGEEGQGFVNFMRTLDAGRIGIAALSLGIA
                     EGAYEEAVRYASMRKQFGKPIAEFQGISFQLADMATEIEAGKHLMFHAAWLAQHKKPF
                     SKEAAMAKLFCSELAMRATTKAVQVFGGYGYTKDYPVERMMRDAKICEIGEGTSEIQR
                     LVISRHILKELAG"
     gene            complement(1597..>2526)
                     /locus_tag="VFN38_06435"
     CDS             complement(1597..>2526)
                     /locus_tag="VFN38_06435"
                     /inference="COORDINATES: protein motif:HMM:NF012779.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HRDC domain-containing protein"
                     /protein_id="HET9011434.1"
                     /translation="AEIAGSLPGKVSDREVESALRLLIQAGAIKSEPESGGRVFVRLL
                     ATAERIKRELGASDAARIGLLRTLWRVAGNTLYDGATIDLDALPSGVGGAVGAMPVLD
                     ALEQTQFLEWHRLGGGDRITNPKRPLSAYPLDWSALDRRRRAELAKLEAVQQYAYATG
                     CRRGFVLRYFGDPAAGKDCGGCDNCLGTHDGSRRGANATPARPLKPGEKKKSRIKAAV
                     DARGEAAELVTSPADAQLLERLRALRSGIAREDKVPAYVVFPDRTLMEMAVRRPKSLF
                     ALGEIKGVGPMKIEKYGERFLTLLRAADDTEAA"
BASE COUNT          370 a          861 c          906 g          389 t
ORIGIN      
        1 caacgcccac gccacgaggc gtcccatgga cgcgaaggcg agggtgagga cgaccgccaa
       61 tgaccggcga ggcgtgcgat ctcccgagcc cagtcgggaa tgcgcggcgg aaacgacgag
      121 cgcgctgaca cggccgacga ctgcctcggc cgtgctggcg cgcgatatca tccggctggt
      181 gcgcgagtcg ccgcgcgcca ccggatgcgg aagagcagta aggggaatca ctgctgaata
      241 gctagcgacc gatcgaggac ggcgcaacgc gccggcccgg gacgagggca ctgcgccgcc
      301 ccggcatcat cccgcgagct ccttcaggat gtgccgtgag atcaccagac gctggatctc
      361 cgacgtccct tcgccgatct cgcagatctt ggcgtcgcgc atcatgcgct ccaccggata
      421 gtccttcgtg tagccgtagc cgccgaacac ctgcaccgcc ttcgtcgtcg cgcgcatggc
      481 gagctccgag cagaagagct tggccatcgc ggcctccttg ctgaacggct tcttgtgctg
      541 ggcgagccag gcggcgtgga acatcaggtg cttgccggcc tcgatctcgg tcgccatgtc
      601 ggcgagctgg aacgagatgc cctggaactc ggcgatcggc ttgccgaact gcttgcgcat
      661 gctcgcgtag cggacggctt cctcgtacgc gccttcggcg atgcccagcg acagcgcggc
      721 gatgccgatg cggccggcgt cgagggtgcg catgaagttc acgaacccct gcccttcctc
      781 gccgagcagg ttttcggccg gcacctccac gtcctccatg atcagctcgg cggtgtcgga
      841 ggcgcgccag cccagcttgt cctccttctt gccggcgcgg aagccgggca tcgccggcag
      901 cgacggctcg tggccgacgc ccaggtcacg caccttcgcg agatcgttcg tgtgcttcgt
      961 gaggatgaac gagctgatgc cgcgcgtgcc ctgcgcggga tcggtcacgg cggtgacgat
     1021 gaagatctcg cccacgctgc cgtgcgtgag gaaccgcttg gtgccgttga gccggtagca
     1081 gttgccgtga cgcaccgccg tggtgcgcgt gccgccggcg tcggagccgg cgtcgggctc
     1141 ggtgagaccg aagccgccga gcaccttgcc gctcgcgagg aaggggacgt atcgccgctt
     1201 ctgctcctcg gtgccgaaat ggacgatggg cgaggtaccg agcgtggtgt gcgcggagac
     1261 ggtgaggccg gtggaggcgt cgaccttggc cagctccatg atcgtgatca tgtagctcag
     1321 gaggtcgagc ccggcgccgc cgagatcttc cgaccagggc acgccgagca ggccgagctc
     1381 ccccatcttc cggacgttct cccacggaaa gatcgagtcg gcgtcgagct tcgcggccac
     1441 cggtgccact tcgtcgcggg cgaactggcg aaccatctcg cgcacggcga ggtgctgctc
     1501 ggagaagtag agggcgtcgt ccatgtctgg aagatagggg ctggacgagg gaggcgcagg
     1561 gcgaacgtgg gcgcccgctc gggaagcggg tcggggttac gccgcctccg tgtcgtccgc
     1621 ggcgcgcagc agtgtgagga accgctcgcc gtacttctcg atcttcatcg ggcccacgcc
     1681 cttgatctcg cccagggcga acagcgactt gggacggcgg acggccatct ccatcagcgt
     1741 ccggtcgggg aagacgacgt acgccgggac cttgtcctca cgcgcgatgc cgctccggag
     1801 cgcgcggagg cgctcgagca gctgggcgtc agcggggctg gtgaccagct ccgccgcctc
     1861 gccgcgcgcg tccacggccg ccttgatgcg cgacttcttc ttctcgccgg gcttgagggg
     1921 ccgcgccggg gtggcgttgg cgccacggcg cgacccgtcg tgcgtgccga ggcagttgtc
     1981 gcacccgccg cagtccttgc ccgccgccgg atcgccgaag tagcgcagca cgaagccgcg
     2041 gcggcagccg gtggcgtacg cgtactgttg caccgcctcg agcttggcca gctccgccct
     2101 gcggcggcga tcgagcgccg accaatccag cggataggcc gagagcggcc gcttggggtt
     2161 ggtgatgcgg tcgccgccgc cgaggcggtg ccactcgaga aactgggtct gctcgagcgc
     2221 gtcgagcacg ggcatcgcgc caaccgcgcc ccccacgccg gacgggagtg cgtcgagatc
     2281 gatcgtggcg ccgtcgtaga gcgtgttgcc cgcgacgcgc cagagcgtgc gcaggaggcc
     2341 gatcctggcg gcgtcgctcg cgcccagctc gcgcttgatg cgctcggcgg tggcgagcag
     2401 gcgcacgaac actcggccgc ccgactccgg ctccgacttg atggcccccg cctggatgag
     2461 gaggcgcaag gcggactcca cctcgcgatc gctcaccttg ccggggaggc tgccggcgat
     2521 ctcggc
//
LOCUS       DASSYW010000403         3184 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_174515, whole genome shotgun sequence.
ACCESSION   DASSYW010000403 DASSYW010000000
VERSION     DASSYW010000403.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3184)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3184)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3184
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_174515"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..518
                     /locus_tag="VFN38_06440"
     CDS             <1..518
                     /locus_tag="VFN38_06440"
                     /inference="COORDINATES: protein motif:HMM:NF013936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HET9011435.1"
                     /translation="SLGAGLPAAAQVHAHPTAPGQRERIGIPASIRMEHEEIHAALTK
                     ATSAPGRVGAAARELAAVLHPHFVREEQIALPPLGLLAPLSRGEFSASMRDVLPMTHS
                     LRAELPRMLEEHRAIRAATTKLGEEARTAGNTTVVRLTEQLKLHAQSEEELFYPAAVL
                     VGDLVRARMSR"
     gene            845..1504
                     /locus_tag="VFN38_06445"
     CDS             845..1504
                     /locus_tag="VFN38_06445"
                     /inference="COORDINATES: protein motif:HMM:NF028519.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SdrD B-like domain-containing protein"
                     /protein_id="HET9011436.1"
                     /translation="MRVPMVILALAATPFLADVSAAQGKAVAKGKTRDECSKPGLRTG
                     HESIDWILKHFDKSCPPAPAPTPTPTPSPDIVGDTSSPVLEPEPAPAPTPAPAPAPDS
                     TATGTRVTGTVYIDSDWNYVPNPGEPGLGGWTVSLLLNGVATMTTTTDGNGAFTFKDV
                     TVGSYSVCVTPKPGFAQWTAPSQYVACPSGMGYSASVTKYDLNVIFEGLDFGYYDTTA
                     P"
     gene            1963..>3184
                     /locus_tag="VFN38_06450"
     CDS             1963..>3184
                     /locus_tag="VFN38_06450"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF013206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HET9011437.1"
                     /translation="MLSTARSLVVCLVLVAACAPPPPLASSGPDVGKRAVAERGMVAS
                     GNGYASDAGLAMLERGGNAVDAAVATAFALGVVEPMMSGLGAGGGAVIWNQAAGRADY
                     VDFYSAAGAVIDTGLPSLRGSATPRGVGVPGAVAGLLSMQARFGRLTRADVLAPAIRL
                     AAEGHTANSLLSRMVSADTGKLGRHAGARRIFLANGRPVRAGDPIVQPELAATLRLIA
                     EQGAGAFYSGPLAQAFVATMRAGGSTLTEADFAGYQPRWERPLCGTYHGRVVLTAAAP
                     QSGMQVLEALNLLEPLDLPALGLPSRVPAAFDALVGALRVAVTDRDAWVGDAHHVAVP
                     QAGISSKAFAATRRGAMTEPAKGRLTPGDPWAADRAAPEAACTPYAPAGAATGPRVAA
                     LGTPDEGQLAETTHL"
BASE COUNT          453 a         1170 c         1108 g          453 t
ORIGIN      
        1 tgtcgctggg ggcgggactt cctgctgctg cgcaggtgca cgcccatccc acggcccccg
       61 ggcagcggga acgcatcgga atccccgcct cgatccgcat ggagcacgag gagattcacg
      121 cggcgctcac gaaggccacg agcgcgccgg gtcgcgtcgg cgcggccgcg cgcgagctcg
      181 ccgcggtcct ccatccacac ttcgtccgcg aggagcagat cgcgctgccg ccactgggcc
      241 tgctcgcgcc gctgtcgcgc ggcgagttct cggcatccat gcgcgacgtg ctcccgatga
      301 cccactcgct gcgcgccgag ctaccgcgga tgctggagga gcatcgtgcg atccgcgcgg
      361 ccacgacgaa gctcggtgag gaggcccgca cggccggcaa cacgacggtg gtgcggctga
      421 ccgagcagct gaagcttcac gcacagagcg aggaggagct gttctatccg gcggcggtgc
      481 tcgtcggcga tctcgtgcgc gcgcgcatgt cgagatgaag tcgtgcccgg ggccgccgcg
      541 gtacgccggc ggcgctgccc ggagtggaaa gtggccggag cgccgccgcg catgccggct
      601 ccggggtccg cggcccggcc gtccattgtg acggccgggc cgttctcgtt gtgaccaaag
      661 gagttacggc cgtgccgcag actgcgagaa acatcgcgtt ttgcgaccac gaaaaatggt
      721 cataacccat tgcgcgacaa cgagttagac tcgtgacgca ccgcacagag cgccgttgcg
      781 ccgcggtcca tattgtcccc cgaagtccaa gtggcaatta cgccccgtac aacaggagaa
      841 cgctatgcgt gttcccatgg tcattctggc tctggccgcg accccctttc tggccgatgt
      901 ctcggccgcc cagggcaagg ccgtcgccaa ggggaagacc cgggatgagt gctcgaagcc
      961 gggtctccgt accggtcacg agtccatcga ctggatcctg aagcacttcg acaagagctg
     1021 cccgccggct ccggctccca cgccgacgcc gacgccctcg ccggacatcg tgggcgacac
     1081 gtcgagcccg gttctggagc ccgagcccgc tccggcgccg acgcccgctc ccgcgcccgc
     1141 gccggactcc accgcgaccg gcacccgcgt gacggggacg gtctacatcg actccgactg
     1201 gaactacgtg ccgaacccgg gcgagccggg cctcggtggc tggacggtgt cgctgctgct
     1261 gaatggcgtc gcgacaatga cgaccaccac cgacggcaac ggcgcgttca ccttcaagga
     1321 cgtgacggtc ggcagctact cggtgtgcgt gacgcccaag cccggcttcg cccagtggac
     1381 cgcgccttcg cagtatgtcg cgtgcccgag cggcatgggg tactcggcga gcgtcacgaa
     1441 gtacgacctc aacgtgatct tcgaggggct cgacttcggc tactacgata cgaccgcacc
     1501 ctgatccacg gcggtgagag atgacgacgg gccccggcgc agtgccgggg cccgtcgtcg
     1561 tcgcgcaccc tcatgcgctc gccggctcga ggggatgcac ctggcccagc gcgcactacc
     1621 ccgccacgat gcgagcaggg gcggccttcg cgagaaggcc gcccctgttc gttcgatgcc
     1681 gccgccgagc gactagctgt cgcagcagca gcagccactg cacttgccgc agcagggacc
     1741 agcaccacat ccgcagctgc aggtgcactt ggggtcgtcg cagcagcagg ccgaatcgta
     1801 cgatgtgctc atcagctcct ccctgaaccg ttcccggaaa tgtaggctcc tccgggtacg
     1861 ccgccaatgg cgcggcggca gggacgacac aacgtaccgc cgcgcgccgc cgtacttcct
     1921 cacgtcactg cgtcctgctc ctcccctcgt tccgtcgtcc cgatgctctc cacagcgcgc
     1981 tcgctcgtcg tctgcctggt cctcgtcgct gcctgtgcgc ctcccccacc tctcgcctcg
     2041 agtggcccgg atgtcgggaa gcgcgcggtc gccgagcgcg gcatggtcgc cagcgggaat
     2101 ggctacgcga gcgacgccgg cctggccatg ctggagcgcg gcggcaacgc ggtggacgcc
     2161 gccgtcgcca cggcattcgc gctgggggtc gtggagccga tgatgagcgg cctcggggcg
     2221 gggggcggcg cggtgatctg gaaccaggcg gcgggtcgcg ccgactacgt tgacttctac
     2281 agcgccgccg gcgccgtgat cgacaccgga ctcccgtcgc tgcgcgggag tgccacgccc
     2341 cgcggagtcg gggtgcccgg cgccgtggcc ggcctcctct ccatgcaggc gagattcggc
     2401 cggctcaccc gggccgacgt cctcgcgccg gccatccgcc tggcggcgga ggggcacacc
     2461 gcgaactcgc tgctctcccg catggtctcg gccgacacgg gaaagctcgg gcgccacgcc
     2521 ggcgcgcgac ggatcttcct ggcgaacggt cgtcccgtgc gcgccggcga ccccatcgtg
     2581 cagccggagc tcgcggccac cctgcggctg atcgccgagc agggagccgg ggcgttctac
     2641 agcggtccgc tggcccaggc gttcgtggcg acgatgcgcg cgggagggag cacgctcacc
     2701 gaggccgact tcgccggcta tcagccgcgc tgggagcgcc cgctctgcgg cacctatcac
     2761 gggcgcgtgg ttctcaccgc cgccgcgccg cagtccggca tgcaggtcct cgaggcgctc
     2821 aacctgctcg agccgctcga tctccccgcg ctcgggcttc cgagtcgcgt gcccgccgcg
     2881 ttcgacgcgc tggtgggcgc cctgcgtgtc gccgtcaccg accgggatgc ctgggtgggt
     2941 gacgcacacc acgtggccgt gccgcaggcg ggaatctcgt cgaaggcctt cgccgcgaca
     3001 cgacgggggg cgatgaccga gcccgcgaag ggacggctga cgcccggcga tccgtgggcg
     3061 gcggaccgcg cggcgccgga agcggcgtgc acgccctacg cgcccgccgg cgcggcgacg
     3121 ggaccccgcg tcgcggcgct cggcacgccg gacgaggggc agctcgccga gaccactcac
     3181 ctgt
//
LOCUS       DASSYW010000404         2394 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1195124, whole genome shotgun sequence.
ACCESSION   DASSYW010000404 DASSYW010000000
VERSION     DASSYW010000404.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2394)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2394)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2394
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1195124"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1530
                     /locus_tag="VFN38_06455"
     CDS             <1..1530
                     /locus_tag="VFN38_06455"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HET9011438.1"
                     /translation="SLVDASAAIVWTSDAAGAFTSQQESWQASTGQDQTQYSGWGWAE
                     AIHPDDRDRVQALWTDTLAQPRAADTEVRIWNAPTQSYRWYSSRVVPRRGADGAVEEW
                     VGACTDIHERRLAEIQLRESEERARLALDIAKQADREKDDFLALLAHELRNPLAPIRT
                     AVQLLKMRKQPDAEDHRLHGVIDRQVQHLVRMVDDLLDVSRVLRGKVELRREPIDIAD
                     AIAIAAETSRPLIDTQRQQLTLDLPPHAVTVHGDAVRLSQVIANLLNNASKYSGVGAT
                     IHLTASQAEGQVVIQVRDSGAGIPGDVLPRVFEPFVQADRSLERSRGGLGIGLTLVKK
                     IVELHNGQVSAESAGLGQGSVFTIRLPAHAGAAASAPVTEQAPAGAFPARVLVVDDNV
                     DAAESLAMLLQSDGHTVTVVHNGVDAVQRAEVWQPDIAVLDVGLPGMNGYEVASALRQ
                     RGESCPELIAVTGYGQAADTKRALAAGFRFHLVKPVDARDLTSAIARCAVTRQSRRAD
                     A"
     gene            complement(1538..2113)
                     /gene="efp"
                     /locus_tag="VFN38_06460"
     CDS             complement(1538..2113)
                     /gene="efp"
                     /locus_tag="VFN38_06460"
                     /inference="COORDINATES: protein motif:HMM:NF001810.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HET9011439.1"
                     /translation="MASLIEAIDIKRKMYFEFEGAPYVCVDVEVSKPTARGGQTLVRL
                     KMRNLITRAVFDKTFKAGEKFAEPDLSTSEASYLYSDGDGFHFMDQESFETLTLGTDV
                     VGDDRMFLTDNMLVQLNKLEGRPFGLQLPTIVELTISSTEPAVRGDTASGGATKAATL
                     ETGLEIRVPLFIKEGEKVKVHTETREFAGRA"
     gene            complement(2113..>2394)
                     /locus_tag="VFN38_06465"
     CDS             complement(2113..>2394)
                     /locus_tag="VFN38_06465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011440.1"
                     /translation="KWEGDEFVVDTLGFNDKSWLDDGGHPRSEEMKVTERFRRKDYGH
                     LEIEFTFNDPKAYTKPWSVTVPFVLLPDTDIIENICENEKDVEHIFFKK"
BASE COUNT          376 a          798 c          838 g          382 t
ORIGIN      
        1 tcgctcgtgg acgccagcgc ggccatcgtg tggacgtccg atgccgcggg cgccttcacg
       61 tcccagcagg agtcgtggca ggcctcgacc gggcaggacc agacgcagta ttcgggatgg
      121 ggctgggccg aggcgattca ccccgacgac cgcgatcgcg tgcaggcgct ctggaccgac
      181 acgctggcgc aaccgcgcgc ggcggacacc gaagtacgaa tctggaacgc gcccacgcag
      241 tcctaccgct ggtacagctc gcgcgtggtg ccgcgccgcg gcgccgacgg ggccgtggag
      301 gagtgggtgg gcgcgtgcac cgacatccac gagcggcggc tggcggagat ccagctgcgc
      361 gagagcgagg agcgcgcgcg cctggcgctc gacatcgcga agcaggccga tcgcgagaag
      421 gacgacttcc tggcgctgct cgcgcacgag ctgcgcaatc cgctggcgcc catccgcacg
      481 gccgtgcagc tgctgaagat gcgcaagcag ccggacgcgg aagaccaccg gctgcacggg
      541 gtgatcgacc gccaggtgca gcacctcgtg cggatggtgg acgacctgct cgacgtgtcg
      601 cgcgtgctgc gcggaaaagt ggagctgcgc cgcgagccga tcgacatcgc ggacgcgatt
      661 gcgattgccg ccgaaacgtc gcgtccgctc atcgacacgc aacgccagca gctgacgctc
      721 gatctcccgc cccatgcggt cacggtgcac ggcgacgccg tgcgcctgtc gcaggtcatc
      781 gccaacctgc tgaacaacgc gagcaagtac tcaggagtgg gcgcgaccat ccatctcacc
      841 gcgtcgcagg cggaaggcca ggtggtgatc caagtacgcg actccggcgc cggcatcccc
      901 ggcgacgtgc tgccgcgcgt gttcgagccg ttcgtgcagg ccgaccggtc gctcgagcga
      961 tcgcgcggcg gcctcggcat cggactcacg ctcgtcaaga agatcgtgga gctgcacaac
     1021 ggccaggtgt cggcggagag cgccggtctg ggacagggga gcgtcttcac catccggctg
     1081 ccggcgcacg cgggcgccgc ggccagtgcg ccggtcaccg agcaagcgcc cgccggcgcg
     1141 tttccggcgc gtgtgctcgt ggtggacgac aacgtggacg cggccgagag cctggcgatg
     1201 ctgctgcagt cggacggcca caccgtgacc gtggtgcaca acggcgtgga cgccgtgcag
     1261 cgcgccgagg tgtggcagcc cgacatcgcc gttctcgacg tggggctgcc cggcatgaac
     1321 ggctacgagg tggcgagcgc gctccgccag cgcggcgaga gctgccccga actgattgcc
     1381 gtcaccggct acgggcaggc cgccgacacg aagcgcgcgc tcgcggcggg gttccgcttc
     1441 cacctggtga agccggtgga cgcgcgcgat ctcacgagcg ccatcgcccg ctgcgcggtc
     1501 acgcggcagt cgcgccgcgc tgacgcctga cgcgaagcta ggcgcgtccg gcgaactcgc
     1561 gggtttccgt gtgcaccttc accttttcgc cttccttgat gaagagcggc acccggattt
     1621 cgaggccggt ctcgagcgtg gcggccttgg tggcgccgcc gctggcggta tcgccgcgca
     1681 ccgcgggctc ggtggacgag atcgtgagct cgacgatcgt cggcagctgc aggccgaacg
     1741 gccgcccctc gagcttgttc agctgcacca acatgttgtc ggtcaggaac atgcggtcgt
     1801 cgcccacgac gtccgtgccg agcgtcagcg tctcgaagct ctcctgatcc atgaagtgga
     1861 agccgtcgcc gtcggaatac aggtacgacg cctccgacgt ggacaagtcc ggttcggcga
     1921 acttctcgcc cgccttgaag gtcttgtcga agaccgcgcg ggtgatcagg ttgcgcatct
     1981 tcaggcggac gagcgtctgg ccgccgcgcg ccgtgggctt ggaaacttcg acgtccacgc
     2041 acacgtaggg tgcgccttcg aactcgaagt acatcttccg tttgatatcg atcgcttcga
     2101 tgagtgaggc cattatttct tgaagaagat gtgctcgacg tccttctcgt tctcgcagat
     2161 gttctcgatg atgtcggtgt cgggcagcag cacgaaggga acggtgaccg accacggctt
     2221 cgtgtaggcc ttggggtcgt tgaacgtgaa ctcgatctcg aggtggccgt agtccttgcg
     2281 ccggaagcgc tcggtgacct tcatctcctc gctgcgcggg tggccgccgt cgtcgagcca
     2341 gctcttgtcg ttgaagccga gcgtgtcgac cacgaactcg tcgccctccc actt
//
LOCUS       DASSYW010000405         2118 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_889967, whole genome shotgun sequence.
ACCESSION   DASSYW010000405 DASSYW010000000
VERSION     DASSYW010000405.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2118)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2118)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2118
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_889967"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..987
                     /locus_tag="VFN38_06470"
     CDS             <1..987
                     /locus_tag="VFN38_06470"
                     /inference="COORDINATES: protein motif:HMM:NF013226.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prenyltransferase"
                     /protein_id="HET9011441.1"
                     /translation="AFTGFYPLLAEDLADLDPVARFLYSARSVILVISFQAALLAGLL
                     AATDRRFAPLPFLLVVLGYVVLHAISNLSNDYFGARRGHDTDDSPRRRYTVHPLLSGA
                     VSSRLLVSGLLVLAAIAGAIGVYFVALRGRAAVALVAVGALLLWAYDAAPRALKELGL
                     GEVAAFLVWGPLMIAGGYYVIAGQPSGAALLASVPYGLGVMSILVGKHIDQRAFDEGQ
                     HQRTLPVLLGERRARALNRASVAGMYLAVAIGIAVGAVTPFALLVLLAAPRALRALRV
                     MSAPAPAEPPAGYVGWPLWYHRVCLVHNRAFGWLYVLGLAAGALLPGSRLWR"
     gene            complement(995..1198)
                     /locus_tag="VFN38_06475"
     CDS             complement(995..1198)
                     /locus_tag="VFN38_06475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011442.1"
                     /translation="MHWLEGVLMAAVGFIPWLIASGRFPSDPQRRAELERKMAIVRNK
                     GVMRAAAVVLWVIGGAAILGFVR"
     gene            complement(1345..1983)
                     /locus_tag="VFN38_06480"
     CDS             complement(1345..1983)
                     /locus_tag="VFN38_06480"
                     /inference="COORDINATES: protein motif:HMM:NF021511.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2238 domain-containing protein"
                     /protein_id="HET9011443.1"
                     /translation="MIRRTEAIALLALGAASLALSAIGVDDRTTWLLEVFPLFIAVPL
                     LLATARRFPLTPLAYRLIFLHALILMVGGHYTYAKVPLGFWAQDVFHFARNHYDRLGH
                     FAQGFVPAIITREILLRRSPLERGKWLFFLTTCVSLSVSACYEFVEWGAALLGGASAD
                     AFLGTQGDVWDTQWDMFMALIGAIVAQLLLARMHDRQLAQLPAPAQRVRAAA"
BASE COUNT          280 a          789 c          743 g          306 t
ORIGIN      
        1 gccttcacgg gcttctaccc gctgctcgcc gaggacctcg ccgacctcga cccggtcgcg
       61 cgcttcctct actcggcgcg cagcgtcatc ctcgtcatct ccttccaggc ggcgctgctc
      121 gccggcctgc tggccgcgac cgaccgccgc ttcgcacctc tccccttcct gctcgtcgtc
      181 ctcggctacg tcgtcctgca cgcgatcagc aacctgtcga acgactactt cggcgcgcgg
      241 cgcgggcacg acaccgacga ctcgccgcgc cgccgctaca cggtgcatcc gctactcagc
      301 ggcgccgtca gctcgcggct gctggtgagc gggctgctcg tgctggcggc catcgccggc
      361 gcgatcggcg tctacttcgt ggcgctgcgc ggccgggcgg cggtggcgct cgtcgccgtc
      421 ggcgcgctcc tcctctgggc ctacgacgcg gcgccgcgcg ccctcaagga gctcgggctc
      481 ggcgaggtcg ccgcgttcct cgtgtggggg ccgctcatga tcgccggcgg ctactacgtg
      541 atcgccggcc agccctcggg cgccgcgctg ctcgcgtcgg tcccgtacgg tctcggcgtc
      601 atgtccatcc tcgtcggcaa gcacatcgac cagcgcgcct tcgacgaggg acagcatcag
      661 cggacgctgc ccgtgctgct cggcgagcgc cgggcgcgcg ccctcaaccg ggcgtcggtc
      721 gccggcatgt acctcgcggt cgcgatcggg atcgccgtcg gcgcggtgac gccgttcgcc
      781 ctcctcgtcc tcctcgccgc gccgcgcgcc ctgcgcgccc tgcgggtgat gtcggcgccg
      841 gcgcccgccg agccgccggc ggggtacgtc ggctggccgc tctggtacca cagggtctgc
      901 ctggtccaca accgcgcctt cggctggctc tacgtcctcg ggctcgccgc cggcgcgctc
      961 ctgcccggct cccggctctg gcgctagccg gccgctacct gacgaacccc aggatcgcgg
     1021 cgcctccgat cacccagagc acgaccgccg cggcacgcat cacccccttg ttcctgacga
     1081 tcgccatctt ccgctccagc tccgctctcc gctgcggatc cgagggaaac cgaccggacg
     1141 cgatcagcca cgggatgaag ccgacggcgg ccatcagtac gccttccaac cagtgcatgg
     1201 gatctccttt cgggcggtga ggtgacgtgc ggcgcggggg gcatcagagg acgcgtacgc
     1261 ccgacccggg caacagggcg gcgcttccac gtgcccggcc caacgtgcag ggcccgcctg
     1321 tcgcgcgagc acgatcacct ctcctcaggc cgcggcccgc acccgctgcg ccggcgccgg
     1381 cagctgcgcg agctggcggt cgtgcatccg ggcgaggagt agctgggcga cgatggcgcc
     1441 gatgagggcc atgaacatgt cccactgcgt gtcccacacg tcgccctgcg tgccgagaaa
     1501 tgcgtcggcc gacgcgccgc cgaggagggc cgcgccccac tcgacgaact cgtagcaggc
     1561 gctcacgctc agggagacgc aggtggtgag gaagaagagc cacttgccgc gctcgagagg
     1621 cgagcggcgg aggaggatct cgcgcgtgat gatcgccgga acgaacccct gcgcgaagtg
     1681 gccgagcctg tcgtagtggt tgcgcgcgaa gtggaagacg tcctgcgccc agaagccgag
     1741 ggggaccttg gcgtaggtgt agtgcccgcc gaccatgagg atgagggcgt gcaggaagat
     1801 caggcggtaa gcgaggggcg tcagcgggaa gcgccgcgcg gtcgcgagga ggagcggcac
     1861 cgcgatgaag agcgggaaga cctcgagcag ccaggtcgtg cggtcgtcca ccccgatcgc
     1921 cgagagcgcg agagaggcgg ctccgagggc gagcagggcg atcgcttccg tgcgtcggat
     1981 catggcccgg gacgagcggg acgatgcgcc gcaaccgttc gcagggcatc cacggtctcg
     2041 tcgtcgaagc gcgagacggc gccgatccgc tcgagtagcg ccacctgcgt cgcgatctcc
     2101 tcgcgcaccg ccggctcc
//
LOCUS       DASSYW010000406         5774 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1221678, whole genome shotgun sequence.
ACCESSION   DASSYW010000406 DASSYW010000000
VERSION     DASSYW010000406.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 5774)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5774)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5774
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1221678"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..865)
                     /locus_tag="VFN38_06485"
     CDS             complement(<1..865)
                     /locus_tag="VFN38_06485"
                     /inference="COORDINATES: protein motif:HMM:NF013775.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase"
                     /protein_id="HET9011444.1"
                     /translation="MPSYKAFPPSWGPLRIPLSSRRAALAGLSLYSACRPRALLAQRT
                     AWVSVALLGPRALTGRSAPWDPIPPAEWQALEEAWRAEFGAFDEIAGYQRTDPTRGGV
                     AMLLLNAGRAVAFVKARRGDDASLAREVWATQAAWRAPLRSFRVAEPLGSGEVAGWTF
                     AAFAPLPARPHQPPAHPPLHSIVAELDQVLDALPRSAATPANWRPMHGDFTPWNLRQT
                     DGRALYLVDWEDVSWAPPGADEVLYRATAAALNHQPAQPVHAPEAIAFWRARIAARCG
                     DQRDQRLRAGIL"
     gene            complement(867..2105)
                     /locus_tag="VFN38_06490"
     CDS             complement(867..2105)
                     /locus_tag="VFN38_06490"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024968.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HET9011445.1"
                     /translation="MKVLLVHNEYQQLGGEDQVFDDDGRLLEEHGHVVSRYTVHNDTI
                     RGMTRLQLARTTVWSTHAYRALRDLVRRERPDVAHFHNTLPLVSPAGYYAVRGEGVPV
                     VQTLHNYRLLCPNALLFRDGHPCEECVGKAVPWPAVQHACYRQSTAATAAVATMLTLH
                     RAAGTWRRRVDLYATPSEFTRRKFIEGGLRAEHVVVKHNVLHPDPGVGPGDGGYVAFV
                     GRLVKEKGVLTMLAAWERWALGDALPLVIVGDGPLAPDVARAAERIPGVSWMGRRPSA
                     EVQAVLARARCLLLPSEWYETFGRVVAEAFAAGTPAVVSSGGAHSELVEHGRTGLVFR
                     PGDADDLARRLREELQHAQGFGRMRAAARAEYVAKFGGAANVRTLLDIYTRAIARHAA
                     DTPRRWRTSTFAGVQTGGEG"
     gene            complement(2102..3547)
                     /locus_tag="VFN38_06495"
     CDS             complement(2102..3547)
                     /locus_tag="VFN38_06495"
                     /inference="COORDINATES: protein motif:HMM:NF016800.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HET9011446.1"
                     /translation="MLVAAALVGGFSAGSPVLPSVVLAAVAGLAARGVARRYPAGALA
                     AAVFAVLIAATKFRMRDPMASLEGELDSQVVLELALFAIAGCFVAGALLGGDRNRPQR
                     WRELRPSGVEWMLVAYVLLALGSVLWSSAPMLTAVRATELAVVLLLGVALRRVRGPDN
                     VLDAIGAPLLVYVLGCAVLAKLFSWADGTRVDYFGFARFSWFAVHPIKAATAAAVAIL
                     YLVVDLSFAEDRSRLRRLGVPAWSLLLPLLVVLALTKSRGPLLALAASVAVLMFLRHG
                     SRLGGALLFAAGAGLLLLVAVTGLTPSDLVARLGAEGGPLSTLLLRGQTANEVSGLTG
                     RTELWHSAGQIIAANWAIGVGYQGSRAMLLAVDAWAAYAHNAFLQTLLDLGVVGTLLL
                     WIPLSLPLFSGSLRDPAVEHAVLHRRAAALTMTVFLLVNSVSSESFAAAPGLEIMLAV
                     GCILAVGRRTPHAAVARRLLAPAPRLAMGGS"
     gene            complement(3586..4440)
                     /locus_tag="VFN38_06500"
     CDS             complement(3586..4440)
                     /locus_tag="VFN38_06500"
                     /inference="COORDINATES: protein motif:HMM:TIGR00696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WecB/TagA/CpsF family glycosyltransferase"
                     /protein_id="HET9011447.1"
                     /translation="MSPTSELAALTATAGTRTPRVNVLGVGVSAINMELALATIGGWV
                     EGGTPHYVCVSGVHGVIESQRSASLRHIHNAAGLVTPDGMPLVWIGRVVVGPHVDRVY
                     GPDLMLACCERFVSRGYRHFLYGGAPGVPEQLAARLQARMPGLIIAGTYSPPFGAISP
                     EQDEDIVRMINEAEPDLVWVGLSTPKQERWMHEHRARLSAPVLLGVGAAFDFHAGLKR
                     QAPRWMQRNGLEWLFRLLSEPRRLGRRYLVNNPQFVWLLLRQVLGLSSYELTDGVGAA
                     PHATGRME"
     gene            complement(4424..5461)
                     /locus_tag="VFN38_06505"
     CDS             complement(4424..5461)
                     /locus_tag="VFN38_06505"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HET9011448.1"
                     /translation="MNAVNTAGSKRILVTGAGGFIGHHLVSFLVQRGYWVRGVDLKYP
                     EFGATDAHEFKILDLRRWENCLEATRGVDEVYALAADMGGMGFISSHHAEILHNNLLI
                     STHTLDAARENGVDRYLYTSSACVYPEYRQTDANVTPLKEEDAYPAQPQDAYGWEKLV
                     TERLCTHYREEYGMETRIVRFHNIFGPQGTWRGGREKAPAAMCRKVALAKLTGNNEVE
                     IWGDGEQTRSFCFIDDCVVGIYKLMQSSYPYPLNLGQDRLVTINQLADLVADAASMRI
                     AKRHVDGPMGVRGRNSDNTLLRQVLGWEPQISLEEGLARTYAWIEEQVEQDLEERPVV
                     AAAEAGYVAHV"
     gene            complement(5522..>5774)
                     /locus_tag="VFN38_06510"
     CDS             complement(5522..>5774)
                     /locus_tag="VFN38_06510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011449.1"
                     /translation="LVFDTPPVNVLADAALLAVQSDGVILVARAGSTPSDALAFAVEQ
                     LRIAGAPVLGALLNDIDLREDTYEGTYRYYPRQTGAPAP"
BASE COUNT          963 a         2044 c         1958 g          809 t
ORIGIN      
        1 gcagaatccc cgcgcgcaat cgctggtccc gctgatcgcc acatcgcgcg gcgatgcgcg
       61 cacgccagaa tgcgattgcc tccggtgcgt gcaccggctg ggcgggctga tggttcagcg
      121 ccgccgccgt ggcgcggtag agcacctcgt ccgcgcccgg gggagcccag ctgacatcct
      181 cccaatccac caggtagagt gcacgcccgt ccgtctgacg cagattccag ggtgtgaagt
      241 caccatgcat cggtcgccag ttcgcgggtg tcgccgccga gcgcggcaac gcgtcgagca
      301 cctggtccag ctcggccacg atagagtgga gagggggatg cgcgggcggc tgatgcggcc
      361 gcgcggggag cggcgcgaac gcggcgaagg tccagccagc gacctcgccg ctgcccagag
      421 gctcggcgac cctgaacgag cgtagaggcg cacgccacgc ggcctgcgtc gcccagactt
      481 ctcgagcgag ggacgcgtcg tcaccacgcc gcgccttcac gaaggcaacg gctcggcccg
      541 cgttcaggag gagcatcgcc acgccgcccc gggtcggatc ggtgcgctga taccccgcga
      601 tctcgtcgaa cgcgccaaac tcagcgcgcc aggcctcctc gagcgcctgc cactccgcgg
      661 gcgggatcgg gtcccaaggc gcactccggc cggtgagcgc acgtggcccg agcagtgcca
      721 cgctcaccca cgccgtgcgc tgcgccagca gagcgcgcgg ccggcacgcg gaatagagag
      781 agagaccagc gagcgcagca cggcgcgacg agagcgggat gcgcaatggt ccccagctcg
      841 gcgggaacgc cttgtacgac ggcatctcag ccctctcccc cggtttgtac acccgcgaac
      901 gtgctcgtgc gccagcgccg cggcgtgtcc gcggcgtgtc gcgcgatcgc acgcgtgtag
      961 atgtcgagga gagtcctcac attcgctgcc cccccgaact ttgccacgta ctccgcgcgc
     1021 gcggcggctc gcatgcggcc gaaaccctgc gcgtgctgca gctcctcgcg cagccggcgg
     1081 gcgaggtcgt ccgcgtcgcc cggccggaag accagcccgg tacgtccgtg ttcgaccagc
     1141 tcgctgtgtg cgcccccgct gctcaccacc gcgggcgtgc ccgcggcgaa ggcctcggcg
     1201 accacgcggc cgaaggtctc gtaccactcc gatgggagca agaggcagcg cgcacgcgcg
     1261 agcacggcct gcacctcggc ggatggtcgc cggcccatcc agctgacacc ggggatgcgc
     1321 tccgcggcgc gcgccacgtc cggcgcgagc ggcccgtccc cgacgatcac gagcggcagt
     1381 gcgtctccga gcgcccagcg ctcccacgcg gcgagcatgg tcagcacgcc cttctccttg
     1441 acgagccgcc cgacgaaggc cacgtacccg ccgtcgccgg gaccgacgcc cggatcgggg
     1501 tggagcacgt tgtgcttcac caccacatgc tccgcgcgga gcccgccctc gatgaacttg
     1561 cgccgcgtga actccgacgg cgtcgcgtag aggtccacgc ggcggcgcca cgtgccggcc
     1621 gcacggtgca gggtgagcat cgtcgccact gcagcagtgg cggcggtgct ctggcggtag
     1681 cacgcgtgct gcaccgccgg ccacggtact gccttgccga cacactcctc acacgggtgt
     1741 ccgtcgcgga agaggagcgc attcgggcag agcagccggt agttgtggag cgtctgcacc
     1801 acgggcacgc cctctccccg taccgcgtag tagccagccg gtgacacgag cggcagcgtg
     1861 ttatggaagt gtgcgacatc ggggcgctcg cggcggacga gatcgcgcag tgcgcggtac
     1921 gcgtgcgtgc tccacacggt ggtgcgtgcg agctggagtc gcgtcatgcc gcggatggta
     1981 tcgttgtgca ccgtgtagcg cgacacgacg tgtccgtgct cctccagcag ccgcccatcg
     2041 tcgtcgaata cctgatcctc gccgccgagc tgctggtact cgttgtggac cagaaggact
     2101 ttcatgatcc tcccatcgcc aggcgaggcg ccggtgcgag gagtcgtctg gccactgcag
     2161 cgtgaggcgt gcggcgaccc accgcgagga tgcacccgac agcgagcatg atctccagcc
     2221 caggggccgc cgcgaagctc tcgctgctca ccgagttgac gaggaggaac acggtcatag
     2281 tgagcgccgc cgcgcggcga tgaagcaccg cgtgctctac cgcggggtca cgcagcgagc
     2341 cgctgaacag cggcagcgac agggggatcc agagcagcag cgtccccacc acgccgaggt
     2401 cgaggagcgt ctgcaggaag gcgttgtgcg cgtatgccgc ccaggcgtcc accgcgagca
     2461 gcatcgcgcg cgagccctgg taacccacgc cgatcgccca gtttgccgcg atgatctgcc
     2521 cggccgagtg ccagagctcc gtgcgccctg tgagcccgga gacctcgttc gcggtctgcc
     2581 cgcggaggag aagcgtggag agcggcccgc cctccgcccc aagtcgtgcg acgaggtcgc
     2641 tgggggtgag acccgtcact gccacgagga gcagaagacc ggcgcccgcg gcgaagagca
     2701 acgcgccgcc cagccggctc ccatggcgaa gaaacatgag cacggccacg gaggccgcga
     2761 gggcgaggag cggcccgcgc gacttcgtca gcgcgagcac cacgagcagc ggcagcagaa
     2821 gactccacgc cggcacgccg aggcggcgaa gccgcgagcg gtcctcggcg aacgagaggt
     2881 ccacgaccag gtagaggatc gcgacggctg cagccgtcgc ggccttgatc gggtgcaccg
     2941 cgaaccagct gaagcgggcg aagccgaagt agtccactcg ggttccatcc gcccatgaga
     3001 acagcttcgc gagcacggca cacccgagga cgtagacgag gagcggtgcc ccgatcgcgt
     3061 cgagcacgtt gtcggggcca cgcacccgcc gcagcgccac tcccagcagc aacacaacgg
     3121 cgagctccgt ggcacggact gcggtgagca tcggcgcgga ggaccagagc accgagccta
     3181 acgcgagcag cacataagcg acgagcatcc actccacacc cgagggccgc agctctcgcc
     3241 accgctgcgg gcgattgcgg tcgccgccga gaagcgcgcc cgccacgaag caaccggcaa
     3301 tggcgaagag tgcgagctcc agcaccacct gactgtccag ttcaccctcc agcgacgcca
     3361 tcgggtcccg catgcggaac ttcgtcgcag cgatgaggac tgcgaacacc gccgcggcga
     3421 gcgctccggc cgggtagcgg cgtgccacgc cgcgcgccgc aagcccggct acggcggcga
     3481 gcaccacgct gggcagcacc ggcgatcccg cactgaagcc accgaccaga gcggccgcga
     3541 ccagcacggc agcggctccg ggccaacgcg cggccgcatc gcgcgtcact ccattctccc
     3601 tgtcgcgtgc ggtgccgccc cgacaccgtc ggtcagctcg tacgacgaga gtccgagcac
     3661 ctggcggagg aggagccaga cgaactgcgg attgttcacg agatatcgcc ggccgagacg
     3721 ccgtggctca ctgagcagcc gaaagagcca ttcgagcccg ttgcgctgca tccagcgtgg
     3781 cgcctgtcgc ttgagtcccg cgtggaagtc gaacgccgcg cccacgccga gcaacactgg
     3841 cgcagacagg cgcgcgcggt gctcatgcat ccagcgctcc tgcttcggcg tgctcaggcc
     3901 cacccagacc aggtcaggct cggcctcgtt gatcatgcgc acgatatcct cgtcctgctc
     3961 gggcgagatg gcgccgaagg gcggcgagta cgttcccgcg atgatcagac cgggcatgcg
     4021 ggcctggagc cgcgccgcga gctgttccgg taccccgggt gcaccaccgt agagaaagtg
     4081 cctgtaacca cgtgacacga agcgctcgca acaagcgagc atgagatcgg gtccgtagac
     4141 acggtccacg tgtggaccaa cgacgacccg accgatccag acaagcggca tcccgtcggg
     4201 agtgacgagc cccgccgcgt tgtgaatgtg cctcagcgac gccgagcgct ggctctcgat
     4261 cacgccgtgt acgcccgaga cgcagacgta gtgtggcgtg cccccctcga cccagccacc
     4321 aatcgtcgcc agcgcgagct ccatattgat cgcgctcacc cccacgccga gcacgttcac
     4381 gcgcggcgtg cgcgtacctg ccgtggcggt gagcgccgcc agctcagacg tgggcgacat
     4441 accccgcttc ggccgccgcg acgaccggcc gctcctcgag atcctgttcg acctgctcct
     4501 cgatccacgc gtaggtcctg gcgagaccct cctcgagcga aatctgcggc tcccagccga
     4561 gcacctggcg cagcaacgtg ttgtcggagt tgcgaccgcg cacacccatc ggcccgtcaa
     4621 cgtgccgctt ggcgatcctc atcgaagccg cgtccgcgac caggtccgcg agttggttga
     4681 tcgtcaccaa ccggtcctgg ccgaggttca gcggatacgg gtagctcgac tgcatcagct
     4741 tgtagatgcc gaccacgcag tcgtcgatga agcagaacga ccgggtctgc tcgccgtcgc
     4801 cccatatctc gacctcgttg ttccccgtca gcttcgcgag agcgaccttg cgacacatcg
     4861 cagccggcgc cttctctcgc ccgccccgcc acgtgccttg cggcccgaag atgttgtgga
     4921 agcggacgat ccgcgtctcc atcccgtact cttcacggta gtgcgtacag aggcgctcag
     4981 tgaccagctt ctcccatcca taagcgtcct gcggctgcgc ggggtaggcg tcctcctcct
     5041 tcagcggcgt cacgttcgca tcggtctgcc ggtactcggg atatacgcag gcggaggatg
     5101 tgtacaggta gcggtctacc ccgttctcgc gcgccgcgtc gagcgtgtgc gtgctgatga
     5161 gcaggttgtt gtgcaggatc tcggcgtggt ggctcgagat gaagcccata ccacccatgt
     5221 cggccgcgag tgcgtaaacc tcgtccacgc cacgcgtcgc ctcgaggcag ttctcccagc
     5281 gccgaaggtc gaggatcttg aactcgtggg cgtcggtcgc gccgaactcc gggtatttca
     5341 agtcgacgcc gcgcacccag tatccgcgct gcacgaggaa gctcacgagg tggtgaccga
     5401 tgaagccgcc ggcgccggtg acgagtatgc gcttcgagcc agctgtgttg accgcgttca
     5461 tgatacctcc tgtggggcga cttgtggtcg cagtagtgag cgagggaagt gagggggtac
     5521 gtcagggcgc cggggcgcct gtctggcggg ggtagtaccg gtaggtgcct tcgtacgtgt
     5581 cctcgcggag atcgatgtcg ttcaggagcg cgccgagtac cggcgcgccg gcgatgcgga
     5641 gctgctcgac cgcgaacgcg agcgcatcgg atggggtgct gccggcacgc gcgaccagga
     5701 tcacgccgtc gctctgcaca gcgaggagcg ccgcatcggc gagcacgttc accggtggcg
     5761 tatcgaacac gagc
//
LOCUS       DASSYW010000407         2400 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_706485, whole genome shotgun sequence.
ACCESSION   DASSYW010000407 DASSYW010000000
VERSION     DASSYW010000407.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2400)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2400)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2400
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_706485"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1780)
                     /locus_tag="VFN38_06515"
     CDS             complement(<1..1780)
                     /locus_tag="VFN38_06515"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HET9011450.1"
                     /translation="MRAVRLRLLAALALVGLAPAVLVAQQATIVSGVVTGEAGQPLPS
                     VQVAIPALGVGAISREDGRYSFTVPAERATGSATLVARRIGLQQKTATITLGQGPVTQ
                     NFVLAASVSQLEGLVVTALGQTRERSQLGTAVQSVTSEQLNTTHDPNIVNQLAGKVSG
                     VVITGAGTQGGSVNVRVRGFTSITGNNNPLYIVDGVPISNDGRGGDPSGASTLSNGRD
                     FGSAISDINPEDVENISVLKGPNAAALYGSRAANGVVLITTKKGGNNKVSTQITASNT
                     WDRPSILPDYQNLYGQGSGGQFRYVDGQGGGVQDGNDQSFGPKLDGRLIDQFTGPQQP
                     WVAHPDNVSSFFNTGQTRNGNIAFSGGSDRTAARLSLGGENVSGIIPNSFLRKVTALA
                     NGSLNVTDKITATGALNYVRNTGQNRPGVGYNSGILEQFVWFGRQVDTEVLKQKLYDA
                     DGNLFNWNYNYHNNPYWLQYENPEQDVRDRTIVSGSLAWRPTDWLSATLRSGTDFFRY
                     NIDQQFAAGNLNFSDPSYAGAFSYLRDVSNENNTDLLLVANRQVASRLTLNATVGGNV
                     RQQSSSTEGVATSGISVPNIYNVSKAA"
     gene            complement(2125..>2400)
                     /locus_tag="VFN38_06520"
     CDS             complement(2125..>2400)
                     /locus_tag="VFN38_06520"
                     /inference="COORDINATES: protein motif:HMM:NF014171.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TrkA C-terminal domain-containing protein"
                     /protein_id="HET9011451.1"
                     /translation="PPSTLIEVDARAPAGDELRAYFVSDQLAVAGATLAEIPFPEGAA
                     VSMLERAGALIAPSGATRIEPGDYVYVIAPVEHRPHVELLFGRPEEH"
BASE COUNT          343 a          777 c          863 g          417 t
ORIGIN      
        1 tcgcggcctt cgacacgttg tagatgttcg gcaccgagat gcccgaggtg gcgacgccct
       61 ccgtggagga ggactgctgg cggacgttgc cgcccaccgt ggcgttgagc gtcagccggc
      121 tcgccacctg gcggttcgcc acgagcagca ggtcggtgtt gttctcgttg ctcacgtcgc
      181 gcaggtacga gaacgcgccc gcgtagctcg ggtcggagaa gttcaggttc ccggcggcga
      241 actgctggtc gatgttgtag cggaagaagt cggtgcccga ccggagcgtg gcgctgagcc
      301 agtcggtggg acgccaggcg agcgagccgc tcacgatcgt gcggtcgcgg acgtcctgct
      361 ccgggttctc gtactggagc cagtacgggt tgttgtgata gttgtagttc cagttgaaca
      421 ggttgccgtc cgcgtcgtac agcttctgct tcagcacctc ggtgtccacc tggcgaccga
      481 accagacgaa ctgctcgagg atgccggagt tgtagccgac gcccgggcgg ttctggccgg
      541 tgttgcggac gtagttcagc gcgccggtcg ccgtgatctt gtcggtcacg ttgagcgagc
      601 cgttggccag cgccgtcacc ttgcgcagga acgagttcgg gatgatgccg gacacgttct
      661 cgccgcccag cgacaggcgc gccgcggtgc ggtcactgcc gccgctgaag gcgatgttgc
      721 cgttgcgggt ctgtcccgtg ttgaagaagc tcgacacgtt gtcggggtgc gccacccacg
      781 gctgctgcgg accggtgaac tggtcgatca gccggccgtc cagcttcggg ccgaagctct
      841 ggtcgttgcc gtcctgcacg ccgccgccct ggccgtccac gtagcggaac tggccgcccg
      901 agccctggcc atacaggttc tggtagtcgg gcaggatcga ggggcggtcc cacgtgttgc
      961 tcgcggtgat ctgcgtggag accttgttgt tgccgccctt cttggtcgtg atgagcacga
     1021 cgccgttggc cgcgcgcgag ccgtacagcg cggcggcgtt ggggcccttg aggacggaga
     1081 tgttctcgac gtcttccggg ttgatgtcgg agatcgcgct tccgaagtcg cggccgttcg
     1141 acagcgtcga ggcgccggac ggatcgccgc cgcggccgtc gttcgagatc ggcacgccgt
     1201 cgacgatgta cagcgggttg ttgttgccgg tgatggaggt gaagccgcga acgcggacgt
     1261 tcaccgagcc accctgcgtg cccgcaccgg tgatcacgac gccggacacc ttgccggcga
     1321 gctggttcac gatgttgggg tcatgggtgg tgttgagctg ctcgctcgtc accgactgca
     1381 cggcggtgcc gagctggctc cgctcgcggg tctggccgag cgccgtgacg acgagccctt
     1441 cgagctggct caccgaggcg gcgagcacga agttctgggt cacgggaccc tgaccgaggg
     1501 tgatcgtcgc ggtcttctgc tgcagtccga tgcggcgtgc gaccagggtc gcgctgccgg
     1561 tcgcccgctc cgcgggcacg gtgaagctgt agcgcccgtc ctcacgagag atggcgccga
     1621 cgccgagcgc cgggatggcg acctgcaccg acggaagcgg ctggcccgcc tcaccggtga
     1681 cgacgccgga cacgatagtt gcctgctgcg ccacgagcac tgcgggggcg agccccacaa
     1741 gcgccaatgc ggcgaggaga cggagacgaa cggctctcat ctggtcctct tctctgttgg
     1801 gtggtgcgtt cgaggcgcat gcggacgagc tcgtcgcgct gcggcctcgg tagacgggtt
     1861 cgacggcgcc cggactggct ccgacggcga tgccgactac ggcgccgggc acgcaaccgc
     1921 gtgcccgggg tgatcgatcc tgcggttccg gtggagccaa cgatttagga ctcgaacatc
     1981 gagtctgtca aggattccac gaatcgcagg ggtggacccg gctttcgtgg ggtcggtcac
     2041 attcgccccc agcggcagaa ctcgacgggg cgcgagccgg actctgcaat ttctacggat
     2101 ggggccgcca aggaagtacg cggctcagtg ctcctccggc cggccgaaca gcagctccac
     2161 atgaggccgg tgctccaccg gggcgatcac gtacacgtaa tccccaggct cgatgcgcgt
     2221 ggcccccgac ggcgcgatca gcgcgccggc gcgctccagc atgctcaccg ccgccccctc
     2281 cgggaagggg atctccgcca gcgtcgcccc ggcgaccgcg agctggtcgg acacgaaata
     2341 cgcccggagc tcgtctcccg ccggcgcccg ggcgtccacc tcgatcagcg tggacggcgg
//
LOCUS       DASSYW010000408         2932 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_369349, whole genome shotgun sequence.
ACCESSION   DASSYW010000408 DASSYW010000000
VERSION     DASSYW010000408.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2932)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2932)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2932
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_369349"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..565
                     /locus_tag="VFN38_06525"
     CDS             <1..565
                     /locus_tag="VFN38_06525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011452.1"
                     /translation="IGFPGAPGFLASTLAAIVIIAFWALATSSRSNNGEPVERPERVP
                     QLYGYTVCLVVLLWSITSTITVVESVLTLSAPEYRSGRDYVGIEPSVSSFEAFRTTYE
                     RSRRMMGGDPRVATAPDTLTDAELHRRYDALRADRIQRNTVEARRSLIASFLSLLIAS
                     VLFAFHWRWLKRTGNAPAFGGTSRIDI"
     gene            complement(865..1512)
                     /locus_tag="VFN38_06530"
     CDS             complement(865..1512)
                     /locus_tag="VFN38_06530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011453.1"
                     /translation="MKASAMIVLLVGVGACATPNMSRGSSSMSFFLTSNGPGLGADLG
                     GLDGADAYCRRLAESVGVADRTWRAYLSTQASGDRAAVNARDRIGTGPWYNAKGVRVA
                     NDVADLHSANNALSKANSITEKGDVVNGRGDQPNRHDILTGSQLDGTAFAAGADKTCS
                     NWTARGAGNAQVGHHDRQGGGDNPTSWNSAHQSSGCSQENLRSTGGDGLFYCFAL"
     gene            1745..1939
                     /locus_tag="VFN38_06535"
     CDS             1745..1939
                     /locus_tag="VFN38_06535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011454.1"
                     /translation="MILLTEQIADRIRPLCQGMPETELQALAAGMARVEHKYATAESP
                     RYGYPFPAVPSPLAPVVRIS"
     gene            1968..>2932
                     /locus_tag="VFN38_06540"
     CDS             1968..>2932
                     /locus_tag="VFN38_06540"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HET9011455.1"
                     /translation="MAAPADLSKLRINRDAPPPTVRRAFGRNAIIFGLALVILGATAF
                     VLRSRGAPTVQVVTATAGSGSGAPAGGATTVTANGYVVARTKASVSAKTAGRLAYLGV
                     SEGSYVKRGNVIARLDNADLQAAVAQAQANVASADASVIEATSDRDQLEREAGRLRDI
                     RKSNPTLVSTQDLEAAASRATQAGARLAAALARKRSAEAGLRMAQANDENTIIRAPFT
                     GTVLRKDAEVGEVVAPSVGGGLTRGAVVTMADLSTLEVEVDVNEAYIGRIASGRPARI
                     TLDAYPDTSFRGMVRQVVPTADRQRATVQVKVTIDDHDPRILPEMG"
BASE COUNT          427 a         1059 c          965 g          481 t
ORIGIN      
        1 aatcggcttt cccggtgcgc ccggctttct cgccagcacc ttggccgcca tcgtcatcat
       61 cgcgttctgg gcgctggcca cgtccagtcg ctcgaacaat ggagaacccg tggaacgtcc
      121 cgagcgcgtc ccgcagctct acggctacac cgtctgcctc gtcgtcctgt tgtggtcgat
      181 cacgagcacg atcaccgtcg tcgagagcgt gctcacgctg agcgcgccgg agtatcgctc
      241 ggggcgcgac tacgtgggaa tcgagccctc ggtgagctcg ttcgaagcgt tccgcacgac
      301 ctacgagcgc tcgcggcgga tgatgggcgg cgacccgcgc gtcgcgaccg cgccggacac
      361 cctcaccgac gcggagctgc accgccgcta cgacgccttg cgcgcggacc gcatccagcg
      421 caacacggtg gaggcgcgcc gctcgctcat cgccagcttc ctctcgctgc tcatcgcctc
      481 ggtgctgttc gccttccact ggcgctggct caagcgcacc ggcaatgcgc ccgcgttcgg
      541 gggcacgtcg cgcatcgaca tctgacggca actgctccac cgcggaatgc acggaccgag
      601 cgcagcgagg gacctgcact gcatttgcac cgcggaggaa cgcagaggga cgcagaggac
      661 ggcaactgct tttcaccaca ggggacacgg aggtgcacgg aacagcaact acgaaggaat
      721 gggcgagtgc tttcctgtgt cctccgtgcc gttcctgtgc cctccgtgta tcagctcttg
      781 ccatcctgtg agaagtgtcc cgagcggcct tcctccgcgt acctccgcgt cctccgcggt
      841 gaaagaggca gttccccaac ctcgctacag cgcgaagcag tagaacagcc cgtccccgcc
      901 ggtggagcgg aggttctcct ggctgcaccc gctcgactgg tgcgcggagt tccacgacgt
      961 agggttgtcg ccgcccccct ggcggtcgtg atgtcccacc tgcgcgttcc ccgcgccgcg
     1021 cgccgtccag ttgctgcacg tcttgtccgc gccggcggcg aaggcggtgc cgtcgagctg
     1081 cgagccggtg aggatgtcgt gccggttcgg ctggtcgccg cgcccgttca cgacgtcgcc
     1141 cttctcggtg atcgagttgg ccttgctcaa cgcgttgttc gcactgtgca ggtcggccac
     1201 gtcgttcgcg acacgcaccc ccttggcgtt gtaccacggc cccgtcccga tccggtcgcg
     1261 cgcgttcacg gccgcgcggt cgcccgacgc ctgggtgctg agataggccc gccaggtccg
     1321 gtcggccacg cccaccgatt ccgcgaggcg cctgcagtac gcgtcggcgc cgtcgagtcc
     1381 tccgagatcg gcgccgagcc ccgggccgtt gctcgtgagg aagaagctca tgctcgagct
     1441 tcccctgctc atgttcggcg tcgcgcacgc accgaccccc accagcagca cgatcatcgc
     1501 tgaagctttc atggccgatc tccggttcac ggttggcggt gaagttgccg cggcccggcg
     1561 ccgtccgcca gctggaatgt gcgttccgtc acgaagcgtg gcgtacctta tgcaatcctc
     1621 gaggcagaga ccgccgaccg cgtcggggtc cgcctatgcc cgccgacccg attcgtcgac
     1681 ccgctcccaa ggtcgatttt tttttgccgt tcgaggtgcc gttgccgtga cgacctgccc
     1741 gcgagtgatc ctgctgaccg aacagattgc ggatcgcatc cgtccactct gccagggcat
     1801 gccggagacc gagcttcagg cgctcgccgc ggggatggcg cgggtggagc acaagtacgc
     1861 gaccgccgag tctccgcggt atggctaccc ctttcccgct gtgccctcac ctctcgcgcc
     1921 cgtcgtccgg atttcgtagg ttcggggtcc cctccccgtt cggacgtatg gccgcgcccg
     1981 ccgacctctc caagctgcgc atcaaccgcg acgctccgcc gccgacggtg cgccgcgcgt
     2041 tcggccgcaa cgcgatcatc ttcgggctcg cgctcgtcat ccttggcgcg acggcgttcg
     2101 tcctccggtc gcgtggtgcg ccgacggtgc aggtcgtgac cgccaccgcc ggaagtggca
     2161 gcggcgcgcc ggccggtggc gccaccacgg tcacggcgaa cggctacgtc gtcgcccgca
     2221 ccaaggcgtc ggtctcggcc aagacggccg gacgactcgc ctacctcggc gtgagcgaag
     2281 gctcgtacgt gaagcgcggc aacgtcatcg cgcggctcga caatgccgat ctccaggcgg
     2341 cggtcgcgca ggcgcaggcg aacgttgcgt cggccgacgc cagcgtgatc gaggcgacga
     2401 gcgatcgcga ccagctcgaa cgtgaagcgg gccgtctgcg cgacatccgg aagagcaacc
     2461 cgacgctcgt gtcgacgcag gatctcgagg cggccgcgag ccgggcgacg caggccggtg
     2521 cccgcctcgc cgccgcgctc gcgcgcaagc ggagcgccga agccgggctg cggatggcgc
     2581 aggcgaacga cgagaacacg atcatccgcg cacccttcac gggcacggtg ctgcgcaagg
     2641 atgccgaagt gggcgaagtg gtggcgccat ctgtgggagg tgggctcacg cgcggcgccg
     2701 tcgtgacgat ggccgacctc tccacgctcg aggtcgaagt ggacgtcaac gaagcctaca
     2761 tcggccgcat cgccagcggt cgtcccgctc ggatcacgct cgacgcctat cccgacacgt
     2821 cgtttcgcgg catggtccgc caggtcgtcc ccaccgccga ccgccagcgc gcgacggtgc
     2881 aggtgaaggt gacgatcgac gaccacgatc cgcgcatcct gccggagatg gg
//
LOCUS       DASSYW010000409         2054 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_529780, whole genome shotgun sequence.
ACCESSION   DASSYW010000409 DASSYW010000000
VERSION     DASSYW010000409.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2054
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_529780"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2024)
                     /locus_tag="VFN38_06545"
     CDS             complement(<1..2024)
                     /locus_tag="VFN38_06545"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HET9011456.1"
                     /translation="MATAFIHSKLTPLFIVASTALGALAVAALPREEEPQIIVPMVDV
                     FVEMPGATAADVEQRVTRPMEQLLWEVPGVEYVYSTSSPGQSMVVVRFTVDEPQEAAL
                     VRLNQKLAANADRIPPGVIGPIVKPRSIDDVPILAVTVWSPRYGDDQLRSLAVQLREA
                     IAEVDDVSEVTIIGGRPRQIRVDIDPARLSAYDLDPLAVQQAIARTNVRGTAAGPVGG
                     DVITGLEAGSRLRTADDVRSTVVSSVRGRPVFVRDVAAVADGDAEPTSYVTFQSKASG
                     AQPAVTIAVAKRKGTNATDVAHRVVKKLDTLKGSLVPTDVHLTITRDYGETAAEKSNE
                     LLWHMLLAVLSVSALLWAVLGRREAAVVLIAIPVTLALTLFLFYLYGYTLNRITLFAL
                     IFSIGILVDDAIVVVENLVRHARMRGQERGGLAAIAIRAVDEVGNPTILATLAVVAAI
                     LPMAFVRGLSGPYLRPIPVGASAAMVFSLVVAFVVTPWAAVRLLQPAAHRDRGEEDFL
                     TRLYRRVMGPLIASGRRRAIFLAGVAALLLAAVALVPLELVTVKMMPFDNKSEFQVII
                     DMPEGTALETTARAASALASAALDEETVVNVQQYVGVSAPYNFNGLVRHYFLRRAPHL
                     ADLQVNLVPKDERSAQSHEVAGRMRERLLPIARQLGATIQVAEVPPGPPVL"
BASE COUNT          339 a          714 c          704 g          297 t
ORIGIN      
        1 agcacgggcg gacccggcgg cacctccgcc acctggatgg tcgcgccgag ctgtctcgcg
       61 atcggcagca gccgctcgcg cattcgccct gccacctcgt ggctctgcgc cgagcgctcg
      121 tctttcggca cgaggttcac ctggagatcg gcgaggtgcg gagcgcgcct cagaaagtag
      181 tgccgcacga gcccgttgaa gttgtagggc gccgacacgc cgacgtactg ctggacgttg
      241 accaccgtct cctcgtcgag ggccgcggac gccagcgccg aggcggcgcg cgctgtcgtc
      301 tccagcgccg tgccctcggg catgtcgatg atgacctgga attcgctttt gttgtcgaac
      361 ggcatcatct tcaccgtcac caactcaagc gggacgagcg ccacggccgc cagcagcagg
      421 gccgcgacgc cggccaggaa gatcgcccgc ctccgaccgc tggcgatgag cggccccatc
      481 acccggcgat agagccgcgt gaggaaatcc tcttcgccgc gatcgcggtg cgcggccggc
      541 tggagcagcc ggacggcggc ccacggcgtc acgacgaagg cgaccaccag cgagaagacc
      601 atggccgccg acgcgccgac aggaatcggc cgcaagtagg gtcccgacaa tccgcggacg
      661 aacgccatcg gcaggatcgc cgcgaccacg gcgagtgtcg cgaggatcgt ggggttgccc
      721 acctcgtcga cggcgcgaat cgcgatggcg gccagaccgc cccgctcctg gcccctcatc
      781 cgcgcgtggc ggaccaggtt ctccaccacg acgatcgcgt cgtcgaccag gatgccgatg
      841 gagaagatca gcgcgaagag ggtgatccgg ttcaaggtgt agccgtagag atagaacagg
      901 aagagcgtca gggcgagggt gaccggaatg gcgatcagca cgaccgcggc ctcgcggcgg
      961 ccgaggaccg cccacagcaa cgccgacacc gagaggacgg cgagcagcat gtgccacagc
     1021 agttcgttgc tcttctcggc ggcggtctca ccgtagtcac gagtgatcgt gaggtgcacg
     1081 tccgtcggca cgagcgagcc cttgagcgtg tcgagcttct tgacgacgcg gtgggcgacg
     1141 tcggtggcgt tggtcccttt ccgcttggcg acggcgatgg tgaccgccgg ttgcgcgccg
     1201 gacgccttcg actgaaacgt gacatacgac gtcggctcgg cgtcgccatc ggcgacggcc
     1261 gccacgtcgc gcacgaacac gggacgcccg cgcacggagc tcaccacggt gctgcgcaca
     1321 tcgtcggccg tgcgcaggcg gctgcccgcc tcgaggcccg tgatcacatc gcccccgacc
     1381 gggcccgccg cggtgccgcg cacgttggtg cgggcgatcg cctgctgaac cgcgagcgga
     1441 tcgagatcgt acgccgacag ccgcgccggg tcgatgtcga cgcgaatctg gcgcggccgc
     1501 ccgccgatga tggtcacttc cgacacgtcg tcgacttcgg cgatggcctc acgcagctgg
     1561 acggcgagcg atcgcagttg atcgtcgccg tagcgcggcg accacaccgt cacggccagg
     1621 atcggcacat cgtcgatcga gcgcggcttg acgatcggcc cgatgacgcc tggcggaatg
     1681 cggtcggcat tcgccgccag tttctgattg aggcgaacga gcgcggcttc ctgcggctcg
     1741 tccaccgtga agcggacgac gaccatcgac tgcccgggac tcgaggtcga gtagacgtat
     1801 tccacgccgg gcacttccca gagcagctgc tccatcggac gcgtgacgcg ctgttcgacg
     1861 tccgccgccg tcgcccccgg catctcgacg aacacgtcga ccatcggcac gatgatctgc
     1921 ggctcctcct cgcgcggcag cgccgccacc gccagggcac caagcgctgt cgaggccacg
     1981 atgaagagcg gcgtcagctt tgagtggatg aacgccgtgg ccatccggcc ggctgcgccg
     2041 taggtcctgg tcat
//
LOCUS       DASSYW010000410         2246 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_475126, whole genome shotgun sequence.
ACCESSION   DASSYW010000410 DASSYW010000000
VERSION     DASSYW010000410.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2246)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2246)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2246
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_475126"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..700)
                     /locus_tag="VFN38_06550"
     CDS             complement(<1..700)
                     /locus_tag="VFN38_06550"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HET9011457.1"
                     /translation="MTRRQSGAIVCAAAVLACEPCTAQPAIDELRIIAPAAPGGGWDQ
                     TGRAMQQALQRAGLVRIAPVENVPGAAGTIGLARFIGAEAGRSDVVLVSGLIMLGGIV
                     THRAPVTLHDVTPLARLTGEYEVIAVPVSSPFRTLRDLLDAFKARPESISWGGGSAGG
                     SDQILAGLVADAVGVSPSRVNYIAFSGGGESLAAILGGQVSVGINGLAEFAPQIEAGT
                     LRPLAISSAERLPGV"
     gene            complement(736..1782)
                     /locus_tag="VFN38_06555"
     CDS             complement(736..1782)
                     /locus_tag="VFN38_06555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011458.1"
                     /translation="MSVRTAVKSDAVKDARRFVKRIREALTRHSIRVLRPLSPDAIAK
                     RQKRLNSSRAGRVFLRACAIARHPWEYWLRRREARRLASAAAPVFIDPAAGFSRFTMA
                     DFDVLPRVVEVARTIYRERRHSLAARRTTSRKPEFLEEMLTDDDLRRYPEFVRFCLSA
                     PVVQAVTAYLGTLPVLRRVGLLLSSPADTNADSRLYHLDPEDFRQVKVFVNVFDVTPD
                     HGPLTWLPGHVSDAVLKGVWRRQKQTGERLDQFRRWSDDEIAAHAARTDLEQLTGPAG
                     TGAFVDASRCLHFGSRITPGATRLVFYAQYLRYHFAYPTDRNRFDAPRAADDPLLARL
                     LAPGRGRTPYSASA"
     gene            1922..>2246
                     /locus_tag="VFN38_06560"
     CDS             1922..>2246
                     /locus_tag="VFN38_06560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011459.1"
                     /translation="MLRPVLTLFLCLVTASAHAQWVNYPTPGLPRGKDGKVLLAAPMP
                     RAKDGKPDLSGVWHVQPTGLAEMKRLFGNDVDALDVPGMEAHTISKYGISVLIDFKPG
                     DSPLRK"
BASE COUNT          360 a          801 c          770 g          315 t
ORIGIN      
        1 ccacgcccgg cagccgctcg gcgctggaga tggcgagcgg ccggagcgtg ccggcctcga
       61 tctgcggcgc gaactcggcg aggccgttga tccccacgga gacctggccg cccaggatcg
      121 cggccagcga ctcgccgcct cccgagaacg cgatgtagtt cacgcgcgac ggcgacactc
      181 cgacggcgtc ggccaccagg cccgccagga tctgatcgct gccgccggcc gacccaccgc
      241 cccaggagat cgactccggc cgcgccttga acgcatcgag cagatcgcgc agcgtgcgga
      301 acggcgacga tacgggaacc gcgatgactt cgtattcgcc cgtgaggcgc gccagcggcg
      361 tgacgtcgtg cagcgtcacc ggcgcccggt gcgtcacgat gccgccgagc atgatcagcc
      421 ccgacacgag caccacgtcg ctgcggcccg cctcggcgcc gatgaagcgc gcgagcccga
      481 tggtgccggc ggctccggga acgttctcca ccggcgcgat gcgcacgagc ccggcgcgtt
      541 gcagcgcctg ctgcatcgcg cgccccgtct gatcccagcc gccgccgggc gcggcgggcg
      601 cgatgatgcg cagctcgtcg atcgcgggct gcgcggtgca cggttcacag gcaagaaccg
      661 ccgccgcgca tacgatcgct ccgctctgcc gacgcgtcat ggacgcgcct actctacccg
      721 gaacggctgc gcgctctacg cggacgcgct gtacggcgtg cggccgcgcc ccggcgcgag
      781 cagccgcgcc agcagcggat cgtccgccgc ccggggcgcg tcgaacctat tgcggtctgt
      841 cgggtacgcg aagtggtagc ggaggtactg cgcgtagaac acgagccgcg tcgcaccagg
      901 cgtgatgcgg ctcccgaagt gcaggcagcg cgaggcgtcc acgaacgcgc ccgtgccggc
      961 cggccccgtc agctgctcga ggtcggtgcg cgcggcatgc gccgcgattt catcgtccga
     1021 ccagcggcgg aactggtcga gccgctcgcc tgtctgcttc tgacgccgcc acacaccttt
     1081 gagcacggcg tcgctcacgt gaccgggcag ccacgtcaac ggaccatgat ccggcgtcac
     1141 gtcgaagacg ttgacgaaga ccttgacctg ccggaagtcc tccgggtcga ggtgatagag
     1201 acggctgtcg gcattggtgt cggccggcga cgacagcagc aagcccacgc ggcgcagcac
     1261 cggcagcgtg ccgaggtagg cggtgaccgc ctgcacgacg ggcgccgaca ggcagaaccg
     1321 gacgaattcc ggataccggc ggagatcgtc gtcggtgagc atttcctcga ggaactccgg
     1381 cttcctcgag gtggtgcggc gcgcggccag gctgtgacgc cgttcccggt agatcgtcct
     1441 cgccacttcg acgacccgcg gcaacacgtc gaaatccgcc atcgtgaagc gtgaaaatcc
     1501 ggcggccgga tcgatgaaca ccggcgccgc cgcggacgcg agacggcgtg cctcccggcg
     1561 gcgcagccag tactcccagg gatggcgtgc gatggcgcat gcgcgcagga acacacgccc
     1621 ggcgcgcgag ctgttcagcc gcttctggcg cttggcgatc gcgtcgggtg aaagcggcct
     1681 gaggacacgg atcgagtggc gcgtcagcgc ctcgcggatg cgtttgacga agcgtcgcgc
     1741 gtctttgacg gcgtcggact tgacagcggt tcggacagac atggcccccc acgttcgatc
     1801 gagcccgcac gggaggggac cgcgcgcgcc agcttcattc tacgagcccg taccgcgatc
     1861 caaatctcga ccatccgatc gagcggttga ccttcggcag gcatctgatt acagtcgccc
     1921 cgtgcttcgc cccgtcctca cgctgttcct gtgtctggtc accgcgtcgg cccatgctca
     1981 gtgggtgaac taccccacgc cgggactgcc gcgcggcaag gacggcaaag tcctgctcgc
     2041 cgcgcccatg ccgcgcgcga aggatggcaa gcccgacttg tcaggtgtgt ggcacgtcca
     2101 gccgaccggg ctcgctgaaa tgaagcggct cttcggcaac gacgtggacg cgctcgacgt
     2161 ccccggcatg gaagcgcaca ccatctcgaa gtacggcatc agcgtgctga tcgacttcaa
     2221 gccgggcgac agccccctgc gcaagg
//
LOCUS       DASSYW010000411         2159 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1474837, whole genome shotgun sequence.
ACCESSION   DASSYW010000411 DASSYW010000000
VERSION     DASSYW010000411.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2159)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2159)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2159
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1474837"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..570)
                     /locus_tag="VFN38_06565"
     CDS             complement(<1..570)
                     /locus_tag="VFN38_06565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011460.1"
                     /translation="MTTPAPPTLTTAGQFAVDRTDAAGGASQRRLLILGGLSGVAAGL
                     LFFGVQAAIPWDHDLPLELPRWEAVLGFWMILAVAPFAIAFAYALSRLIAWERDGALN
                     QLGFVFAVVAFSVLAVTQSFQNAVSIVLTDEMKAEGSGPEAWDRIYAGLNALDLGTDL
                     AWDLFLGLWLLCIGVAMFRHSRLGARWAVP"
     gene            complement(659..1054)
                     /locus_tag="VFN38_06570"
     CDS             complement(659..1054)
                     /locus_tag="VFN38_06570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011461.1"
                     /translation="MKVAEIIPLADTWGMHGDVGWGWMALMMAVMVLFWGAVIFGVVW
                     LIRSVAGGGPSPSGETPVSRETAVQILERRFAEGALTLEDYRARRDVLVNGTAEPNAA
                     ASTTRRGRPLTQDAQEVTKEPESPGARRW"
     gene            complement(1068..1385)
                     /locus_tag="VFN38_06575"
     CDS             complement(1068..1385)
                     /locus_tag="VFN38_06575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011462.1"
                     /translation="MALAGVGVLAARALAPRLHARLMAGCERMFEQLPDTFPPKRMLR
                     GIEEIRANSARTLALLEAREQRGEAATHRAAPPTRKGALRHGRNEEGDLAALGATARG
                     ADA"
     gene            complement(1412..>2159)
                     /locus_tag="VFN38_06580"
     CDS             complement(1412..>2159)
                     /locus_tag="VFN38_06580"
                     /inference="COORDINATES: protein motif:HMM:NF015155.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MMPL family transporter"
                     /protein_id="HET9011463.1"
                     /translation="TEALRTLRARILPATIGTLPGASYAVTGGTAGSADSNALLKRSW
                     PRVFAFVLTFAFLLLLVSFRSLVIAAKAILLNLLSVCAAYGVLVAAFQYGWAESILGF
                     RSNGGIASWLPIFMFVILFGLSMDYHVFILSRIREAFDRGLTTEDAVAHGIMTTAGVV
                     TSAALVMVGVFSIFITLPILDVKQAGFGLAVAVLIDATIVRAVLLPATMKLLGDWNWY
                     LPRWLNWLPELEHTEKPPFTRALASGPSWR"
BASE COUNT          368 a          730 c          744 g          317 t
ORIGIN      
        1 cgggacggcc cagcgggcgc cgagacggct gtggcggaac atggccacac cgatgcagag
       61 caaccagagg ccgaggaaga gatcccaggc caggtccgtg ccgaggtcga gcgcgttgag
      121 cccggcgtag atccggtccc aggcctcggg gccggatcct tcggccttca tctcgtcggt
      181 gaggacgatg gagacggcgt tctggaagct ctgtgtcacc gcgaggacgc tgaatgcaac
      241 gacggcgaac acgaagccga gctggttgag cgctccgtcg cgctcccacg cgatcagccg
      301 cgaaagcgcg taggcgaacg cgatcgcgaa gggcgccacc gcgaggatca tccagaaccc
      361 cagcaccgcc tcccagcggg gcaactcgag cggaagatcg tgatcccagg ggatcgccgc
      421 ctgcacgccg aagaacaaga ggcctgcggc gaccccggac aaacctccga gaatcagcag
      481 ccgccgctga ctcgctccgc cggcggcgtc cgttctgtcc acggcgaact ggccagccgt
      541 cgtcagcgtg ggtggggcgg gggttgtcat tcccacacct ccttggaagg tccgaccgcg
      601 tttgaaggcg tcgctgacgc gactacttgc accgcgggag cttggtcagg tgcggcggtc
      661 accacctgcg ggcccctggc gactccggtt ctttggtcac ttcttgcgcg tcttgcgtaa
      721 gaggtcgccc tcggcgtgtc gttgaggcag cagcgttcgg ttcggcggtc ccgttgacga
      781 gcacgtctcg gcgcgcgcgg tagtcctcca gcgtgagtgc gccttcggcg aagcgccgtt
      841 cgaggatctg gacggcggtc tccctgctga cgggcgtttc cccggagggc gacggaccgc
      901 cgcctgcgac gctgcggatg agccaaacga cgccgaagat gacggcgccc cagaagagca
      961 ccatcacggc catcatcaag gccatccagc cccagccaac gtcgccgtgc atcccccacg
     1021 tgtcagccaa gggaatgatt tctgcgacct tcatcggtct cgcctcccta cgcgtctgct
     1081 cctcgggcgg tcgcgccgag tgcggcgaga tcgccttcct cgttcctgcc gtggcgcagc
     1141 gcaccctttc tggtcggcgg agccgcgcgg tgcgtcgcgg cctcgcccct ctgttcgcgc
     1201 gcctccagca gcgcaagcgt ccgcgcgctg ttcgcgcgga tctcctcgat gccccgcagc
     1261 atccgcttgg gcggaaaggt gtcgggcagc tgctcgaaca tgcgctcgca gcccgccatc
     1321 aggcgcgcgt gcagtctcgg tgcaagcgca cgcgccgcca gcacgccgac gccggcgagt
     1381 gccacaccaa tcgctcgccg tcgcatcccc gtcacctcca gctcggtccg ctcgccaacg
     1441 cacgggtgaa gggtggcttc tcggtgtgct cgagctcggg cagccagttg agccagcggg
     1501 gcaggtacca gttccagtcg ccgagcagct tcatcgtcgc ggggagcagc acggcacgga
     1561 cgatggtggc gtcgatgagg acggcgaccg cgagcccgaa gccggcctgc ttcacgtcga
     1621 ggatcggcag ggtgatgaag atcgagaaca caccgaccat caccagcgcg gcgctggtga
     1681 cgacgccggc agtagtcatg atcccgtggg cgacggcgtc ctcggtcgtc aagccgcggt
     1741 cgaacgcttc ccggatacgg ctgaggatga agacgtggta gtccatcgag aggccgaaga
     1801 ggatcacgaa catgaagatc ggcagccacg aggcaatgcc gccgttggag cggaagccga
     1861 ggatgctctc ggcccagccg tattggaagg cggccacgag cacgccgtag gcggcgcaga
     1921 cggagagcag gttgagcagg atcgccttgg ccgcgatcac gagcgagcgg aacgagacaa
     1981 gcaggagcag gaatgcgaag gtcaggacga acgcgaagac ccgcggccag gaccgcttga
     2041 gcagcgcgtt gctgtccgcc gaacccgcgg tgccgcccgt gaccgcgtag ctcgctccgg
     2101 gtagcgtccc gatcgtcgcc ggcaggatcc gcgcgcgtag cgtccgcagc gcctcggtc
//
LOCUS       DASSYW010000412         3604 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1073271, whole genome shotgun sequence.
ACCESSION   DASSYW010000412 DASSYW010000000
VERSION     DASSYW010000412.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3604)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3604)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3604
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1073271"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            84..1397
                     /locus_tag="VFN38_06585"
     CDS             84..1397
                     /locus_tag="VFN38_06585"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD/NAD(P)-binding oxidoreductase"
                     /protein_id="HET9011464.1"
                     /translation="MRRIVILGAGTAGTIMANRLRRLFAREVADGRTRITAVDADDRH
                     LYQPGLLFLPFGLLEPDQLVKPTRPLVHRHVELRRAPIDRVDVERSEVHLLGQAPLPY
                     DVLIVATGTRIVPGETEGLTGPGWRERMFDFYTVEGATALRDALARFEGGRIVVDIVE
                     MPIKCPVAPLEFAFLADWYFRKRGIRDRVDLTYVTPLDGAFTKPACSASLTHLLGEKG
                     IRLETEFSAGRVDGTTGRLISWDDREIPFDLLVSVPVHMGAEYVGRSPGLGDDMGFVL
                     TDPRTLQASAAPNVFAIGDATNVPASKAGSVAHFEAEILADNVRRFLAGEPLLPDFDG
                     HANCFIETGFERALLIDFNYDVEPLPGAFPIPALGPMRLLRETRLNHLGKLAFRWVYW
                     NVLLPGHDIPGVGPRMSMRGKRPGTPPFITQTPKGGQAVPAGSMP"
     gene            1394..1708
                     /locus_tag="VFN38_06590"
     CDS             1394..1708
                     /locus_tag="VFN38_06590"
                     /inference="COORDINATES: protein motif:HMM:TIGR03342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TusE/DsrC/DsvC family sulfur relay protein"
                     /protein_id="HET9011465.1"
                     /translation="MSTTIANVQLDVDAEGFLQKPEQWNEAIGEEIARGAGLPELTDR
                     HWLVIRFMRERFLSTGQAPSIRTLGKESGVPVKELYQLFPKGPAKLAAKIGGIPKPHG
                     CI"
     gene            1720..2187
                     /locus_tag="VFN38_06595"
     CDS             1720..2187
                     /locus_tag="VFN38_06595"
                     /inference="COORDINATES: protein motif:HMM:NF025066.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsrE/DsrF/DrsH-like family protein"
                     /protein_id="HET9011466.1"
                     /translation="MSDTIEKVSIIVSKGSFEGIYPALIMANGARMEGIEANVFFTFF
                     GMDAINRKHYAQLKVATVGNPGLHIPTMVGGLPGMSTFVTRQMEKKLAELDIPPVPEF
                     VTLLADSGARLFACKASVDMFDLSRDDFIEELEAIITVGEFYQLAAGGQIIFT"
     gene            complement(2202..3290)
                     /locus_tag="VFN38_06600"
     CDS             complement(2202..3290)
                     /locus_tag="VFN38_06600"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HET9011467.1"
                     /translation="MNAIFFTGFPGFLGSELLPRVLERAADAEAVCLVQPKYAALAAQ
                     RLEQLVRLHPSLAGRARIVEGDITAPGLGLGDSAALEARVVEIFHLAAIYDLSVGRDV
                     ATRVNVEGTRNMLAFARRCGALRRFHYVSTCYVSGRYPGLFTEDMLEESQSFNNFYEE
                     TKYLAEVEVQRAMRAGLPATIYRPAVVVGDSTTGATQKYDGPYFVMQWLLRQPSLAIM
                     PVVGDTRSTRFNVVPRDFVVDAIAYLSGRPESLGRVYQLADPEPATVDEMLTEIGRTT
                     GRTMIRVPLPLSLAKTTIDRVPGVYRLMRIPSSAIDYFVLPTTYATTHAQHDLRGSGI
                     TCPPFRSYADRLVGFVRAHPEVSASAMA"
     gene            complement(3299..>3604)
                     /locus_tag="VFN38_06605"
     CDS             complement(3299..>3604)
                     /locus_tag="VFN38_06605"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HET9011468.1"
                     /translation="VWSRSTAHAVRVARRLQAGTVNVNESYAASWTATSAPIGGMKES
                     GVGRRHGAEGILKYTEAQTVAIQRGMPLAPPRFVAERTYAAMMPRLLRAMRWIPGLR"
BASE COUNT          553 a         1281 c         1222 g          548 t
ORIGIN      
        1 ccgctgacgc gcgcggacgg cgcgggtcat tatagaacca tatggtcact cagtatttca
       61 ccacgacccg cggagggacc tccatgcggc gcatcgtgat cctcggagcc ggcacggccg
      121 gcaccatcat ggccaaccgg ctgcggcgcc tgttcgcccg cgaggtcgcc gacggccgca
      181 cgcgcatcac tgccgtggac gccgacgacc gccaccttta ccagccgggg ctgctctttc
      241 tccccttcgg cctcctggag ccggaccagc tcgtgaagcc cacgcggccg ctcgtgcatc
      301 ggcacgtcga gctccggcga gcgccgatcg accgggtgga cgtcgagcgc agcgaggtgc
      361 acctgctcgg acaggccccc cttccctacg atgtcctcat cgtcgccacc ggcacgcgca
      421 tcgtgcccgg ggagacggag ggcctcaccg gacccggctg gcgcgagcgc atgttcgact
      481 tctacaccgt ggagggtgcc accgcgctgc gcgacgcact ggcgcgcttc gagggtggcc
      541 gcatcgtggt ggacatcgtg gagatgccca tcaagtgccc cgtcgcgccg ctggagttcg
      601 cgttcctcgc cgactggtac ttcaggaagc gcggcatccg cgaccgcgtc gacctcacct
      661 atgtgacccc gctcgacggc gcattcacca agccggcctg ctcggcgtcg ctcacccatc
      721 tgctgggcga gaagggcatc cggctcgaga ccgagttcag cgccggccgg gtggacggga
      781 cgacaggccg gctgatctcg tgggacgacc gcgagatccc gttcgacctc ctcgtctcgg
      841 tgccggtaca catgggcgcc gagtacgtgg ggcgatcacc cgggctcggc gacgacatgg
      901 ggttcgtcct gaccgatcca cgcaccctgc aggcgtcggc ggcgccgaac gtgttcgcca
      961 tcggcgacgc caccaacgtg cccgcgtcca aggcggggtc ggtcgcgcac ttcgaggccg
     1021 agatcctcgc cgacaacgtg cggcgcttcc tcgccggcga gccgctcctc ccggacttcg
     1081 acggacacgc caactgcttc atcgagacgg gcttcgagcg ggcactgctg atcgacttca
     1141 actacgacgt cgagccgctg cccggcgcct ttccgattcc ggcgctgggg ccgatgcgcc
     1201 tgctccggga gacgcgtctc aaccacctcg gcaagctcgc gttccgctgg gtctactgga
     1261 acgtgctgct gccgggccac gacatcccgg gcgtcggacc gcgcatgtcg atgcgcggca
     1321 agcgtccggg caccccgccg ttcatcaccc agacaccgaa gggcgggcag gccgtgcccg
     1381 ccgggagcat gccatgagca ccacgatcgc gaacgtgcag ctcgacgtcg atgccgaagg
     1441 cttcctgcag aagccggagc agtggaatga agccatcggc gaggagatcg cgcgcggcgc
     1501 cggcctgccg gagctgaccg accggcactg gctggtgatc cgcttcatgc gcgagcgctt
     1561 cctctccacc ggccaggcgc cgtccatccg gacgctcggc aaggagtcgg gcgtgccggt
     1621 gaaggagctg taccagctct tccccaaggg tcccgcgaag ctcgcggcga agatcggcgg
     1681 catccccaaa ccccacggct gcatctgagc ggaggcacca tgtcggacac gatcgagaag
     1741 gtctccatca tcgtctcgaa gggctccttc gaggggatct accccgcgct catcatggcc
     1801 aacggcgccc gcatggaagg gatcgaggcc aacgtcttct tcaccttctt cgggatggat
     1861 gcgatcaacc ggaagcacta cgcgcagctc aaggtcgcga ccgtgggcaa tccggggctg
     1921 cacatcccga cgatggtcgg cggactgccg gggatgtcga cgttcgtcac gcgccagatg
     1981 gagaagaagc tggcggagct ggacatcccg cccgtgccgg agttcgtgac gctcctcgcc
     2041 gattcggggg ccaggctgtt cgcctgcaag gcgtcggtcg acatgttcga tctctcgcgc
     2101 gacgacttca tcgaggagct cgaggcgatc atcaccgtcg gggagttcta ccagctcgcg
     2161 gccggcgggc agatcatctt cacctgaccg cgcgcgcaag ctcacgccat cgccgacgcg
     2221 ctcacttccg ggtgtgcccg cacgaatccc acgaggcggt cggcgtagct gcggaagggc
     2281 gggcaggtga tgccgctccc ccgcaggtcg tgctgggcgt gggtggtggc gtaggtcgtc
     2341 gggagcacga agtagtcgat cgcgctcgac ggaatgcgca tgagccggta caccccgggc
     2401 acgcggtcga tcgtcgtctt ggcgagcgag agcggcaggg gcacgcggat catggtgcgt
     2461 cccgtcgtgc ggccgatctc cgtcagcatc tcgtccaccg tggccggctc cgggtcggcg
     2521 agctgataca cgcggccgag cgactcgggc cgcccgctga ggtacgcgat ggcgtccacg
     2581 acgaagtcgc gcgggaccac gttgaaccgc gtgctacgcg tgtcgcccac cacgggcatg
     2641 atggccagcg agggctgccg gaggagccac tgcatgacga agtacgggcc gtcgtacttc
     2701 tgcgtcgcgc cggtggtgct gtcgcccacc accaccgccg gccggtagat cgtcgcgggg
     2761 agtccggcgc gcatggcgcg ctgcacttcc acctcggcga ggtacttcgt ctcctcgtag
     2821 aagttgttga acgactgcga ctcctcgagc atgtcctcgg tgaacaggcc cgggtagcgc
     2881 ccgctcacgt agcaggtgct cacgtagtgg aagcgccgca gcgcgccgca gcggcgcgcg
     2941 aaggccagca tgttccgcgt cccctccacg ttcacgcgcg tcgcgacgtc gcgccccacc
     3001 gacaggtcgt agatggcggc gagatggaag atctcgacga cgcgcgcctc cagcgcggcg
     3061 ctgtcgccca ggccgaggcc cggcgcggtg atgtcgcctt ccacgatccg cgcgcggccg
     3121 gcgagcgacg gatgcagccg caccagctgc tccagccgct gggcggcgag ggccgcgtac
     3181 ttcggttgca cgaggcacac cgcctcggca tccgcggcgc gctcgaggac gcgcggcagc
     3241 agctcgctgc cgaggaagcc gggaaatccc gtgaagaaga tggcgttcat gacagtcctc
     3301 accgcagtcc gggtatccag cgcatcgccc gcagcagccg cggcatcatc gccgcgtacg
     3361 tgcgctcggc gacgaatcgc ggcggagcga gcggcatccc gcgctggatc gcgaccgtct
     3421 gcgcctcggt gtacttgagg atcccctcgg cgccgtgccg gcgcccgacc cccgattcct
     3481 tcatgccgcc gatcggcgcc gacgtggccg tccagctggc cgcgtagctc tcgttgacgt
     3541 tcacggtgcc cgcctggagc cggcgcgcca cccgcaccgc gtgggcagtg ctccgcgacc
     3601 agac
//
LOCUS       DASSYW010000413         2492 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_368479, whole genome shotgun sequence.
ACCESSION   DASSYW010000413 DASSYW010000000
VERSION     DASSYW010000413.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2492)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2492)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2492
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_368479"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..475
                     /locus_tag="VFN38_06610"
     CDS             <1..475
                     /locus_tag="VFN38_06610"
                     /EC_number="1.17.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl
                     diphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0016114 - terpenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HET9011469.1"
                     /translation="GDTIRVSLTPKPNGDRTEEVLVAQQILQSLGLRSFAPQVTACPG
                     CGRTTSSFFQHMAEDIQTFLREQMPVWRTTRPGVETMNVAVMGCVVNGPGESKHANLG
                     ISLPGTFEEPKAPVYVDGKLFTTLKGDHIVQEFLVILEEYVARTYPAPALAGTTS"
     gene            complement(500..1117)
                     /locus_tag="VFN38_06615"
     CDS             complement(500..1117)
                     /locus_tag="VFN38_06615"
                     /inference="COORDINATES: protein motif:HMM:NF024724.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HET9011470.1"
                     /translation="MTRGYSDRINHAFAFAAKHHDRQVRKGTRLPYLTHPANVAVILT
                     RYDQDEQTVVSGILHDVIEDCVRDGYTRDMLEQRIGDKFGPEVLDTVLAVTERQVDEE
                     GIELSSEERKDDYLARLAAASERARWVCAADKIHNGSAILADLHRTLDPDTVWSRFNV
                     GRLGTVRWYRRVYERLREIGFDAPIMAELRDVAEELEQAGAATPR"
     gene            complement(1213..1707)
                     /locus_tag="VFN38_06620"
     CDS             complement(1213..1707)
                     /locus_tag="VFN38_06620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0033745 - L-methionine-(R)-S-oxide
                     reductase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HET9011471.1"
                     /translation="MAEETLDLRGLPKPEAYRQLDEQVRAVLAGVDDEIAAMATISAL
                     VHHAFGHLWTGFYRVVTPGSLLRVGPYQGTLGCLEIRVGRGVCGTAAAERRTVVVPDV
                     SAFPGHITCDARSRSEIVVPILDGRGELLAVFDIDSEHPDAFDDDDRVGLERIAAWFA
                     TAPG"
     gene            complement(1720..2157)
                     /locus_tag="VFN38_06625"
     CDS             complement(1720..2157)
                     /locus_tag="VFN38_06625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011472.1"
                     /translation="MGFMWADTLLAAERAHVIRLLAWGAGSAFVGSALLAWLYLGRRR
                     SALLEHFGIQTAAWGTVELALGAVAWSSLGYRDLAAATRLDRLLWLNVGLAGGYVLVG
                     LTLLLVGWRTGRRLGLMGAGLAVVVQGTALALLDLLLAGQISR"
BASE COUNT          410 a          899 c          836 g          347 t
ORIGIN      
        1 cggcgacacg attcgcgtgt cgctcacccc caaaccgaac ggcgatcgaa cagaggaagt
       61 cctggtagca caacagatcc tccagtcgct cggccttcgc agcttcgcgc cgcaggtgac
      121 cgcgtgcccc ggatgcggac ggacgacgtc cagcttcttc cagcacatgg cggaagacat
      181 ccagacgttc cttcgcgagc agatgcccgt ctggcgcacc acgcgtcccg gcgtggaaac
      241 catgaacgtc gcagtcatgg gctgcgtggt gaacggcccc ggcgagtcga agcacgcgaa
      301 cctcggcatc tcgctgccgg gcacgttcga ggagccgaag gcgccggttt acgtggacgg
      361 caagctgttc acgacgctca agggcgacca catcgtgcag gagttcctcg tcatcctcga
      421 ggaatacgtg gcgcggacgt atccggcgcc ggcactcgcc ggcacgacga gctagcgacg
      481 acgggccagc gacgacgggc tagcgcggcg tcgcggcgcc ggcctgctcc agctcctccg
      541 ccacgtcgcg cagctccgcc atgatcggcg cgtcgaaccc gatctctcgc aggcgctcgt
      601 acacgcggcg ataccaccgc acggtgccca gccgccccac gttgaagcgc gaccacacgg
      661 tgtccgggtc cagcgtccgg tggaggtcgg cgaggatcgc gctgccgttg tggatcttgt
      721 cggcggcgca gacccagcgc gcccgctcgg aggcggcggc gagccgcgcg agatagtcgt
      781 ccttgcgctc ctcgctcgac agctcgatcc cctcttcgtc cacctgccgc tccgtcacgg
      841 ccagcacggt gtcgagcacc tccggaccga acttgtcacc gatccgctgc tcgagcatgt
      901 cgcgcgtgta tccgtcgcgc acgcagtcct cgatcacgtc gtgcaggatc cccgacacga
      961 ccgtctgctc gtcctggtcg tagcgcgtca ggatcacggc gacgttcgcc ggatgcgtca
     1021 ggtacgggag gcgcgtcccc ttgcggacct gtcggtcgtg gtgcttcgcc gcgaaggcga
     1081 aggcatggtt gatccgatcg gaatagccgc gggtcatggt cacgtcagac tacgacaggg
     1141 agcggagagg cgctggacgc agggcgaaag atactgcgga cggcgcggcg gtgcagcgtg
     1201 gtcgcgatct gctcatccgg gcgccgtcgc gaaccaggcg gcgatccgct ccagtccgac
     1261 gcggtcgtca tcgtcgaagg cgtcgggatg ttcggagtcg atgtcgaata ccgcgagcag
     1321 ctcgcctcgt ccatcgagga tcggcacgac gatctccgag cgtgagcgcg catcgcaggt
     1381 gatgtggccc ggaaacgcgc tcacgtccgg caccaccacc gtacgccgct cggccgccgc
     1441 ggttccgcag acgccgcggc ccacccggat ctccaggcac cccagggtgc cctggtacgg
     1501 tcccacgcgc aggagcgacc cgggggtgac cacgcggtag aagcccgtcc acaggtgccc
     1561 gaaagcatgg tggacgagcg cgctgatggt ggccatcgcg gcgatctcgt catccacgcc
     1621 ggcgagcacg gcgcgcacct gctcgtcgag ctggcggtag gcctccggct tcggcagccc
     1681 tcgcaggtcc agcgtctctt cagccatggg cgaccctcgt catctcgaga tctgcccggc
     1741 gagcagcagg tccagcagcg ccagggcggt accctggacc accaccgcga ggccggcacc
     1801 catcagcccg agccggcggc ccgttcgcca gcccaccaga agcagggtga ggcccaccag
     1861 cacatagccg ccggccaacc cgacgttcaa ccacagcagc cggtcgagcc gagtggccgc
     1921 ggcaagatcc cgatacccga gcgacgacca ggcgaccgcg ccaagcgcca gctccaccgt
     1981 accccacgcg gccgtctgga tgccgaagtg ctcgagcagt gcggagcggc gccggcccag
     2041 gtagagccag gcgagcaggg cactgcctac gaaggcactg cccgctcccc acgccagcag
     2101 ccggatgaca tgagcccgct cggcggcgag cagggtgtcc gcccacatga atcccatgcg
     2161 gcaaagtagc ggagtggacg acgaggagca gtcggggaat cgccgaaccg gctggccgcg
     2221 cccgggggct cgctcccgcg ctagcgtggc cagggcgact tgcccgctga tcgagcactc
     2281 cgcacgcggc gggcggcttg cctggacgcc gagtccgcgg cggaatacgc gggtcggcgg
     2341 ccgtggcccg gaatctgtct ctccatgcag cgatggcgat cgcctcgcca cggccgcacc
     2401 cgacccgccc agaactcgct gacactgaga tgaccgttcc ttccttcgcc gcggacagct
     2461 tcgcgcgctg ggtcgccgcc gccggcgcga tt
//
LOCUS       DASSYW010000414         3692 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_253007, whole genome shotgun sequence.
ACCESSION   DASSYW010000414 DASSYW010000000
VERSION     DASSYW010000414.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3692)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3692)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3692
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_253007"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1115)
                     /locus_tag="VFN38_06630"
     CDS             complement(<1..1115)
                     /locus_tag="VFN38_06630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011473.1"
                     /translation="MRHTLRTLAVLLLLGFGRAPAAVTQETHTVAASPRPMTPEDVIA
                     LRTVNDPQLSPDGKWVAYTVSRLDLEQNAADADIWLASTLGEFPSRLTTSRKNDSSPR
                     WSPDGKRIAFISAREEKPQIFLMPAFGGEPERLTEHKGGVRQIAWSPDGKSIAFVADQ
                     EPTPEEEKRIKEKDDAIVVDTNYKFNRLWVLDVATRKARLLATGDAVASDPQWSPDGT
                     MLAFTSNPTPRADDQSVTDVWVVPVSGGAARRLVTNAGSDHWPRWSPDGTQIAYVTSA
                     GIDVRQLQLAVMPAAGGAPRMVAPSFLYQPGAPAWSGDGRTLYFSAPVRTTTQLFAVP
                     AAGGIPRALTELRGVITGTSFARDGRSVAFTMADARRP"
     gene            1257..1961
                     /locus_tag="VFN38_06635"
     CDS             1257..1961
                     /locus_tag="VFN38_06635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011474.1"
                     /translation="MSHPPLHSCRPVRALALLCSLALAACGDGSGLLGVSGSADAATV
                     RFVNASASSLDLATAGVVAASNANIAPGSGVACFSVADPVAPGLSVRQSGTSADLTGF
                     APLLARGGRYTLVAYPGASGFIQFATVPNVSLLVAGRSALRVFNGSSSLGVVDVHVTA
                     PGAALVSPSVTGVGYGAASGTFDVSAGTIQVRLTSSTTAAVLFDSGSLTLEAGKVYTL
                     VVSSATSAALLVPDCI"
     gene            complement(2116..>3692)
                     /locus_tag="VFN38_06640"
     CDS             complement(2116..>3692)
                     /locus_tag="VFN38_06640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HET9011475.1"
                     /translation="TAQRARMRLAPLALLIGLSTRLTAQQPAPSRPPFDVTETSIADI
                     HAAMRAGTLTCRELVTGYLERIAAYDRNGPALNSLIVVNPAALAVADSLDRRARGGRL
                     AGALHCIPIIVKDNFETNDLPTTAGSLSLEGMRPARDAFMVRRIREAGAIVLAKSNMA
                     EFAFTPFETVSSILPGYTKNPYALDRVTAGSSGGSAAAVAASLGEAALGTDTGNSIRG
                     PSAHQALVGIRSTMGLTSRDGVAPLNLASDIAGPMARTVADAVAIFQVVAGEDAADTV
                     TARSRGRRAADYTTSLKRDALRGARIGVLRQAYERPGTDPEVVRVFTAAVDDMRRQGA
                     VVVDSAMVAGLDERLRALTGSCNQFKFDLEAWLARQGDRAPVHTVAEILKSRRFHPTI
                     QPRLEAAQAESLPPARNPGCRDRDEFRAWLRTAVTGMMDSLRLDALVYPTWSNPPRLI
                     GDLNTPAGDNSQLFSPSTGFPAITVPMGYTRGQLPAGVTLFGRAWSEPTLIALAYSYE
                     HATRHRRPPASAPPLR"
BASE COUNT          472 a         1319 c         1334 g          567 t
ORIGIN      
        1 ggccgccgcg catcggccat cgtgaaggcc acgctgcggc cgtcgcgcgc gaagctcgtc
       61 cccgtgatca ccccgcgcag ctcggtgagc gcgcgcggga tcccccccgc ggccggcacg
      121 gcgaacagct gcgtcgtcgt ccgcaccggt gcggagaagt acagcgtgcg gccgtcgccc
      181 gaccatgccg gcgcaccggg ctgatacagg aaggagggtg cgaccatccg aggcgcgccg
      241 ccggccgcgg gcatcaccgc cagctggagc tggcgcacgt cgatccccgc gctggtgacg
      301 tacgcgatct gcgtcccgtc gggcgaccag cgcggccagt ggtcggagcc cgcgttcgtc
      361 accagccgcc gcgccgcgcc ccccgacacc ggcacgaccc agacgtccgt gacgctctgg
      421 tcgtcggcgc ggggcgtcgg gttggacgtg aaggcgagca tcgtcccgtc gggcgaccac
      481 tgcggatcgc tcgccaccgc gtcacccgtc gcgagcagcc gcgcctttcg cgtcgccacg
      541 tccagcaccc agagccggtt gaacttgtag ttcgtgtcca cgacgatggc gtcgtccttc
      601 tccttgatgc gcttctcctc ttcgggcgtc ggctcctggt cggcgacgaa agcgatcgac
      661 ttcccgtccg gcgaccaggc gatctgccgc acgccgccct tgtgctccgt gagccgctcc
      721 ggctctcccc cgaacgcggg catcaggaag atctgcggct tctcctcgcg tgccgagatg
      781 aacgcgatgc gcttgccgtc gggcgaccag cgcggcgagc tgtcgttctt cctgctcgtc
      841 gtgagccggc tcggaaactc gccgagcgtc gacgcgagcc agatgtcggc gtcggcggcg
      901 ttctgttcga gatccagccg gctcaccgtg tacgcgaccc acttgccgtc gggggagagc
      961 tgcgggtcgt tcaccgtccg cagcgcgatg acgtcctcgg gtgtcatcgg cctcggcgac
     1021 gcggccaccg tgtgggtctc ctgcgtgacg gcggccgggg cgcggccgaa gccgaggagg
     1081 agcaggacgg cgagagtgcg cagggtgtgt cgcatcacgt ggcgtcggga gggagaggag
     1141 ggagcacaaa cttccctctc cactcccgcc ggggcaagcc gcattacgcc actcgcgcag
     1201 cggcgggcag cgggttcatc ttttgctcca tggctcgtcg tctccctgga ggtcccatgt
     1261 cgcacccacc gcttcattcg tgccgtcccg tccgcgccct ggcgctcctc tgcagcctcg
     1321 ccctggcggc ctgcggcgac ggaagcggcc tccttggcgt gagcggctcc gccgacgcgg
     1381 cgacggtccg cttcgtcaac gcctccgcca gctcgctcga tctcgccacg gcgggagtgg
     1441 tggcggcgtc gaacgcgaac atcgccccgg gcagcggcgt cgcctgcttc tccgtcgccg
     1501 atcccgtcgc tcccggactc tcggtgcgcc agtccggcac ttcggcggac ctcaccgggt
     1561 tcgcccctct cctcgcccgc gggggacgct acacgctggt ggcctatccc ggggcgtcgg
     1621 gtttcatcca gttcgccacc gtgccgaacg tgtcgctcct ggtggccggc cgcagcgcgc
     1681 tccgcgtctt caatggctcc tcgtcactcg gcgtggtgga cgtccacgtc accgcgcccg
     1741 gcgccgcgct ggtgtccccg tccgtcaccg gcgtgggcta cggcgccgcg tcgggtacct
     1801 tcgacgtgag cgccggcacc atccaggtgc ggctcacgag ctccaccacg gcggcggtgt
     1861 tgttcgactc gggcagcctc accctcgagg cgggcaaggt gtacaccctc gtggtgtcga
     1921 gcgccaccag cgcggcgctg ctcgtgccgg actgcatata gatcggcgcg cgggtcgagg
     1981 ggatccacgt ttggcgtttg gcgttcgccg tggtccgtct tgcgtttcac cgcgtcgttg
     2041 aacgcgaaac ggacgacggc acacggcaca ctccaaacgt ggattccccg taagctttcc
     2101 cgaagcctgt tgatgtcagc gaagcggtgg cgccgacgca ggcggtcttc gatgccgggt
     2161 cgcatgctcg taggagtagg ccagggcgat cagcgtcggc tcgctccacg ctcggccgaa
     2221 cagcgtcacc cccgccggaa gctggccgcg ggtgtagccc atcggcacgg tgatcgccgg
     2281 aaagccggtg ctcggcgaga agagctggct gttgtcgccg gcgggggtgt tcaggtcgcc
     2341 gatgagccga ggcgggttgc tccaggtggg gtagacgagc gcgtcgagcc gcagggagtc
     2401 catcatgccc gtgacggccg tgcgcagcca ggcgcggaac tcgtcgcggt cgcggcagcc
     2461 cgggttgcgc gcggggggaa gcgactcggc ctgcgccgcc tccagccgcg gctggatcgt
     2521 cgggtggaag cggcgcgact tgaggatctc ggccacggtg tgcaccggcg cacgatcgcc
     2581 ctgccgcgcg agccacgcct cgaggtcgaa cttgaactgg ttgcacgagc cggtgagagc
     2641 gcggagacgc tcgtcgagac cggcgaccat cgccgaatcg acgaccaccg cgccctgccg
     2701 gcgcatgtcg tccaccgcgg cggtgaacac gcgcacgacc tcgggatcgg tgcccgggcg
     2761 ttcgtacgcc tggcgcagca cgccgatgcg cgcgccgcgc agcgcgtccc gcttcagcga
     2821 cgtcgtgtag tcggcggccc gccggccgcg cgagcgtgcc gtcaccgtgt cggcggcgtc
     2881 ctctcccgcg acgacctgga agatcgccac cgcgtcggcg accgtgcgcg ccatgggacc
     2941 ggcgatgtcg gacgcgaggt tcagcggcgc cacgccgtcg cggctcgtga gccccatcgt
     3001 cgagcggatg ccgacgagcg cctggtgcgc cgaggggccg cgaatggagt tgccggtatc
     3061 ggtgccgagc gccgcctcgc cgaggctcgc cgccacggcg gcggccgacc cgccgctgga
     3121 gcccgcggtc acccggtcga gcgcgtacgg gttcttcgtg taaccgggga ggatcgagct
     3181 caccgtctcg aacggcgtga acgcgaactc cgccatgttc gacttcgcga gcacgatcgc
     3241 gccggcttcg cggatgcggc gcaccatgaa ggcgtcccgc gccggccgca tcccctcgag
     3301 cgagagcgac cccgccgtcg tcggcaggtc gttcgtctcg aagttgtcct tcacgatgat
     3361 cgggatgcag tggagggcgc ccgcgagccg tccgccgcgg gcgcgccggt cgagcgagtc
     3421 ggccaccgcg agcgccgccg gattcaccac gatgagcgag ttgagcgccg gcccgtttcg
     3481 gtcgtacgcg gcgatgcgct ccaggtagcc cgtcaccagc tcgcggcagg tgagggtgcc
     3541 ggcgcgcatg gccgcgtgaa tgtcggcgat cgacgtctcg gtgacgtcga acggcggtcg
     3601 ggacggcgcg ggctgctggg ccgtgagccg cgtggacagg ccgatgagga gggcgagtgg
     3661 ggcgaggcgc atgcgggccc gctgggctgt gg
//
LOCUS       DASSYW010000415         2233 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1492730, whole genome shotgun sequence.
ACCESSION   DASSYW010000415 DASSYW010000000
VERSION     DASSYW010000415.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2233)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2233)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2233
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1492730"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..416
                     /locus_tag="VFN38_06645"
     CDS             <1..416
                     /locus_tag="VFN38_06645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011476.1"
                     /translation="RRMLATAPYTRAQREPLAPAERACPWCCSSIPQNAKKCHACAEW
                     VVGTSGGIAAAVLRLLALLWAGLTLLAAAGLWTMGQGIVRWVWMHAVDPAITPQVVTL
                     LLYAVIAVVLLKGLMVSVGLGLLARLAPRRPRWWS"
     gene            complement(514..1932)
                     /locus_tag="VFN38_06650"
     CDS             complement(514..1932)
                     /locus_tag="VFN38_06650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TldD/PmbA family protein"
                     /protein_id="HET9011477.1"
                     /translation="MSKSLYHLADAEFLSEEQARALAHRILSFATADETRVNITSGWS
                     GNTRFAGNEITTSGGTTNTTVTVTSTLGRRRASSSTNILDDESLKRTVELAERLAKLS
                     PEDPEAMPELGTQAYAPVTGYFARTAELTPETRAAAARRTIDTAEAEGTGEGRLFVAG
                     FLQANAGASAVATSRGLFAYHRSSSADLSTTVRTPDATGSGWASAGARDWGLLDPAAL
                     GRAAARKAVASRKPSAIEPGLYTVVLEPQAVSDIMPQLIGAFNARANDEGRGTFSKAG
                     GGTRLGEKIADERVTIYSDPADPDLLAQPFDASGFPLRRVVYIENGILKNFSYDRYWA
                     QQKGVTPTTGGGGGGGGGGGGGGFGGGGGGGLKFVGGTQSTDELIAGTARGILVTHFF
                     YIRFLDPRTVLLTGLTRDGTFLIENGKVTRPLKNFRWNESPLFMLNKLDAIGRAERTA
                     AGQVMPSLKVRDFNFTSLSDAV"
     gene            complement(1932..>2233)
                     /locus_tag="VFN38_06655"
     CDS             complement(1932..>2233)
                     /locus_tag="VFN38_06655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="metallopeptidase TldD-related protein"
                     /protein_id="HET9011478.1"
                     /translation="KNRGSWSIDHQRYNFQFSGQAYYEVKGGKITGMLKDVAYQANTP
                     AFWNSMDMIGGVKSYWLGGSFGDGKGEPSQSNSVSHGCPPARFRGVNIVSTGRGE"
BASE COUNT          291 a          798 c          774 g          370 t
ORIGIN      
        1 gacgccggat gctggccacg gccccgtaca cccgcgcgca gcgcgagccg ctcgcccccg
       61 ccgagcgtgc ctgtccctgg tgctgctcgt cgatcccgca gaacgcgaag aagtgccacg
      121 cctgcgccga gtgggtggtc ggcacctcgg gggggatcgc cgccgcggtg ctccgcctgc
      181 tcgcgctcct ctgggcgggg ctcaccctgc tcgcggcggc gggactgtgg acgatgggcc
      241 aggggatcgt ccgctgggtg tggatgcacg cggtcgatcc cgccatcacg ccgcaagtcg
      301 tcaccctgct gctctacgcc gtcatcgccg tcgtgctgct caaggggctg atggtgagcg
      361 tgggactcgg cctgctcgcc cggctcgccc cgcggcggcc gcggtggtgg agttgaacgg
      421 tgaacggtga acggtgaacg gtgaacggtg cggcggtcgg gcggtcgggc agttaccgtc
      481 caaccgccga accgcccaac cgcctcaccg ttctcagacc gcgtccgaca gcgaggtgaa
      541 gttgaagtcc cgcaccttga gcgacggcat cacctggccc gccgccgtcc gctccgcccg
      601 cccgatcgcg tcgagcttgt tgagcatgaa gagcgggctc tcgttccagc ggaagttctt
      661 caacggccgc gtgaccttgc cgttctcgat caggaaggtg ccgtcgcggg tgaggccggt
      721 gagcagcacc gtgcgcggat cgaggaagcg gatgtagaag aagtgcgtga cgaggatccc
      781 tcgcgccgtg ccggcgatca gctcgtcggt gctctgcgtt ccgcccacga acttgagccc
      841 cccgccgccg ccgccgccga acccgccgcc gccacctccc ccgccacctc ccccgccccc
      901 gcccgtcgtc ggggtcacgc ccttctgctg cgcccagtag cggtcgtacg agaagttctt
      961 caggatgccg ttctcgatgt acacgacccg gcggagaggg aagccgctcg cgtcgaacgg
     1021 ctgcgccagc aggtcgggat cggccgggtc ggagtagatg gtcacccgtt cgtcggcgat
     1081 cttctccccc agccgggtgc caccccccgc cttgctgaag gtgccgcgcc cttcgtcgtt
     1141 cgcgcgcgcg ttgaaggcgc cgatgagctg cggcatgatg tcggacaccg cctggggctc
     1201 gagcaccacc gtatacagcc cgggctcgat cgccgacggc ttgcggctcg cgaccgcctt
     1261 cctcgccgcc gcgcgcccga gcgcggcggg atcgagcagc ccccagtcgc gcgcgccggc
     1321 gctcgcccac cccgaaccgg tggcgtcggg agtgcgcacg gtggtggaga gatcggccga
     1381 gctgctgcgg tggtaggcga acaggccgcg gctcgtggcc acggcgctcg ccccggcgtt
     1441 ggcctgcagg aagccggcga cgaacagccg cccctctccg gttccttccg cttcggccgt
     1501 gtcgatcgtc cgacgtgccg cggcggcgcg cgtctccggc gtcagctcgg cggtgcgcgc
     1561 gaagtagccg gtcaccggcg cgtacgcctg cgtcccgagc tccggcatcg cctcggggtc
     1621 ctcggggctc agcttcgcga gccgctcggc cagctccacc gtgcgcttca ggctctcgtc
     1681 atcgaggatg ttggtggacg acgatgcccg ccggcggccg agggtggagg tgacggtgac
     1741 ggtggtgttg gtggtgcccc cgctcgtcgt gatctcgttg ccggcgaagc gggtgttgcc
     1801 gctccagccg ctcgtgatgt tcacgcgcgt ctcgtcggcc gtggcgaacg agaggatccg
     1861 gtgcgccagc gcccgtgcct gctcctccga caggaactcg gcgtcggcca ggtgatagag
     1921 ggacttcgac atcactcgcc cctcccggtg ctgacgatgt tcacgccgcg gaagcgggcg
     1981 ggcgggcagc cgtggctcac cgaattcgat tgcgacggtt cacccttgcc gtcgccgaac
     2041 gagccgccga gccaatacga cttcacgccc ccgatcatgt ccatcgagtt ccagaaagcg
     2101 ggggtgttcg cctgatacgc gacgtccttc agcatgccgg tgatcttgcc tcccttcact
     2161 tcgtagtatg cctgccccga gaactggaag ttgtagcgct ggtggtcgat ggaccacgac
     2221 ccgcggttct tga
//
LOCUS       DASSYW010000416         3542 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1507032, whole genome shotgun sequence.
ACCESSION   DASSYW010000416 DASSYW010000000
VERSION     DASSYW010000416.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3542)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3542)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3542
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1507032"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1449)
                     /locus_tag="VFN38_06660"
     CDS             complement(<1..1449)
                     /locus_tag="VFN38_06660"
                     /inference="COORDINATES: protein motif:HMM:NF014589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyltransferase C-terminal
                     domain-containing protein"
                     /protein_id="HET9011479.1"
                     /translation="MSDFVYVLGVPNFANYEASASLIRVPRAGGDVAYISIAEDRLTR
                     TKHTYAFPLRGIQYCLEVFGLESLEQIDFIYTDYARLPRWMNSGPGYRKLEHDYLKLR
                     LRYPRERIRVLDHHDAHAGAAFHLSPFDEAAVLVVDSLGSRLNTQTLYHFTDAGARVI
                     ERGDIWGIGRLYSLITGSVLPYGPEKGFGKTMGLAPYGAVHPGPVLDFKARDHGMSSD
                     YSAFFSRPPLPRIVAKDVRRCEDREQVLDPYFARAAYDVQQECERQMVRMAEYAYEKT
                     GSRNLCIAGGTALNGLANARVLQRSRFESVWIPPGCSDTGLSLGLALWGYFQDVTDGR
                     SEDRRLRGKAKASMTTPYTGRSYAREPIARMLDQYGIAYTSAEPEAVAPHIAAGKVIG
                     WFEGGSEFGPRALGHRSILADPRDPGMKDTLNRRVKFREPYRPYAPSVLAEHAREWLD
                     LQADSPFMLMVVDVHEDKRAQVPAITHVDHTTR"
     gene            1494..3077
                     /locus_tag="VFN38_06665"
     CDS             1494..3077
                     /locus_tag="VFN38_06665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011480.1"
                     /translation="MKILFFGRHFTYFRNFESVLRGLAERGHHIHLAADRDESTGGLQ
                     LVQTLAATYPNLTYGEAPPRAADDNAWVANHLRLGLDYLRYQHRIFDNAPTLRNRAKD
                     RTPAVFLTLGRMAQTFGEPVRRLFAGIVRRLERYVPEDPAIGEFISSHAPDVVLITPL
                     INLGSSQIEYQRAARRLGIPTALCVWSWDHLSSKALIRDAPDRVFVWNDVQRREALDL
                     HGLPADRIVVTGAQNFDQWFNRQPSRGRADFCAHVGLPGDRPFVMYACSTLFDHSPPE
                     AKLVVEWIRQLRASRLPHLQNVGILVRPHPSRMFEWDDIDLSTMGPTVLWGRNPLDPV
                     SKADYFDSMYHSAAVVGLITSAFIEAGIVGREVHTVLDPEFEDNQLGTVHYHYLTNTA
                     GGLLIVGRGWDEHLQQLDATLARPRQDVMKPFIKAFVRPHGLEVAATPRFVEQVEAMA
                     GLQIQPARRDALAFVWRRAIDRLRAARHDERYDRWILSERELGVKLRNKEHREKKMRE
                     HHAARKARQAAEKARKAVH"
     gene            3093..3473
                     /locus_tag="VFN38_06670"
     CDS             3093..3473
                     /locus_tag="VFN38_06670"
                     /inference="COORDINATES: protein motif:HMM:NF039360.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HET9011481.1"
                     /translation="MNIRLALATGLLLTSVARLSAHHVVSQFFDTSKLVTLQGTLTRV
                     DWREPHVILRLETRNGNGSPVSWSVETRNPQGLAQAGLNRDAFKVGDRFSATVCVAKD
                     GTRWAVTHEISRPGTPAGVGVGGC"
BASE COUNT          582 a         1233 c         1178 g          549 t
ORIGIN      
        1 gcgcgtggtg tggtccacgt gcgtgatggc ggggacctgc gcgcgcttgt cctcgtgcac
       61 gtccacgacc atcagcatga aggggctgtc ggcctgcagg tccagccact cacgtgcgtg
      121 ttcggcgagg acgctcgggg cgtaaggacg atacggctct cggaacttca cccgccggtt
      181 gagcgtgtcc ttcatgccgg gatcgcgcgg gtcggccagg atggatcgat gtcccagcgc
      241 ccgcggcccg aattcggatc cgccctcgaa ccagccgatc accttcccgg ccgcgatgtg
      301 cggcgccacc gcctcgggct cggccgacgt gtaggcaatc ccatactgat cgagcatccg
      361 cgcgatcggc tcgcgcgcgt acgagcgccc ggtatacggc gtcgtcatcg aggccttcgc
      421 cttcccacgt agccgccggt cttcagaccg gccgtccgtt acgtcctgga aatagcccca
      481 caacgcgagc cccagcgaca gccccgtatc ggagcacccc ggcgggatcc agacgctctc
      541 gaatcgcgac cgctgcagca cgcgggcgtt ggccagcccg ttcaacgcgg tgccgcccgc
      601 gatacagaga ttgcggctgc cggtcttctc gtaggcgtac tccgccatcc ggaccatctg
      661 ccgctcgcac tcctgctgca cgtcgtaggc ggcgcgcgcg aaatacggat ccagcacctg
      721 ctcgcggtcc tcgcagcggc ggacgtcttt cgcgacgatc cgcggcagcg gcgggcggct
      781 gaagaacgcg ctgtagtccg acgacatccc gtgatcgcgc gccttgaagt cgagcacggg
      841 gccgggatgc accgcgccgt acggcgccag ccccatcgtc ttgccgaacc ccttctcggg
      901 tccgtacggc agcaccgatc cggtgatgag cgagtagagc cgcccgatgc cccagatgtc
      961 gccgcgctcg atgacccgcg cgccggcgtc cgtgaagtga tagagcgtct gcgtgttgag
     1021 ccgcgagccg agcgaatcca cgacgagcac cgcggcctcg tcgaacggcg agagatgaaa
     1081 ggcggcgccc gcatgggcgt cgtgatgatc gaggacgcgg atgcgctcgc gcggatagcg
     1141 gaggcgcagc ttcaggtagt cgtgttcgag cttgcgatag ccgggcccgc tgttcatcca
     1201 gcgcggcagc cgcgcgtagt cggtgtagat gaagtcgatc tgctccagcg attcgaggcc
     1261 gaagacctcc aggcagtact gaatgccgcg gagcggaaac gcgtaggtgt gcttcgtccg
     1321 cgtgagccgg tcttccgcaa tcgagatata cgcgacgtcg ccgccggcac gcggcacgcg
     1381 aatcaacgat gcgctggctt catagttggc gaagttcgga acacccagga cgtagacgaa
     1441 gtcggacaat cgctccctcg gccggccagt gtagcaagat agactagaca cccgtgaaga
     1501 tcctcttctt cgggcggcac tttacctact ttcgaaactt cgagtcagtg ctgcgcggcc
     1561 tcgccgagcg tggccatcac attcacctcg ccgcggaccg cgacgaatcc accggcggcc
     1621 tgcaactggt ccagacgctg gccgccacgt atccaaacct gacgtatggg gaggcgccgc
     1681 cgcgggccgc cgacgacaac gcgtgggtgg cgaatcacct gcgtctcggc ctcgactacc
     1741 tgcgctacca gcaccggatc ttcgacaacg cgccgacgct gcgcaatcgc gccaaggatc
     1801 ggacgccggc ggtcttcctg acgctcggcc ggatggcgca gacgttcggg gaaccggtgc
     1861 gccgcctctt cgccggcatc gtccgccggc tggaacgcta cgtcccggag gaccccgcga
     1921 tcggcgagtt catctcgtcg cacgcccccg acgtagtgct gatcacgccg ctcatcaacc
     1981 tcgggtcgtc gcagatcgag tatcagcgcg ccgcgcggcg tctgggcatc cccaccgcgc
     2041 tctgcgtctg gagctgggat cacctgtcga gcaaggcgct catccgcgac gcgccggatc
     2101 gcgtgttcgt ctggaacgac gtgcagcgcc gggaggcgct ggacctgcac ggtctgccgg
     2161 ccgatcgcat cgtcgtgacc ggagcgcaga acttcgacca gtggttcaac cgccagccgt
     2221 cacgcggccg ggccgatttc tgcgcgcacg tcgggctgcc cggcgatcgg ccgttcgtga
     2281 tgtacgcctg ctcgacgctc ttcgatcaca gcccgcccga ggcgaagctg gtggtcgagt
     2341 ggatccgtca gctgcgcgcc agccgcctgc cccacctgca gaacgtgggc atcctcgtgc
     2401 ggccgcaccc gtcgcggatg ttcgagtggg acgacatcga cctgagcacc atggggccga
     2461 cggtgctgtg ggggcgcaat ccgctcgacc ccgtctcgaa ggccgactac ttcgattcga
     2521 tgtaccacag cgcggcggtg gtggggctca tcacgagcgc cttcatcgaa gccggcatcg
     2581 tcggtcgcga agtgcacaca gtgctcgacc ccgagttcga ggacaaccag ctcggcacgg
     2641 tgcactacca ctacctgacc aacaccgccg gcggcctgct catcgtcggc cgcggctggg
     2701 acgagcacct gcagcagctc gacgccacgc tggccaggcc cagacaggac gtgatgaagc
     2761 cgttcatcaa ggcgttcgtg cgcccgcacg gcctggaggt ggcggccacg ccgcggttcg
     2821 tcgagcaggt cgaagccatg gcggggctcc agatccagcc ggcacggcgc gacgccctgg
     2881 cattcgtctg gcggcgggcc atcgaccgcc tgcgcgccgc gcgccacgac gagcgctacg
     2941 accgctggat cctgtcggaa cgcgagctgg gtgtgaagct gcggaacaag gagcatcgcg
     3001 aaaagaagat gcgcgaacat cacgcggctc gaaaggcacg ccaggcggcc gagaaggccc
     3061 ggaaagcggt acactgaggg cccagtacct cggtgaacat ccgcctggct ctcgccacgg
     3121 ggctgctcct gacatcggtc gcgaggctct ccgcgcatca cgtcgtctcg cagttcttcg
     3181 acacgtcgaa gctggtgacg ctgcagggca cgctgacccg cgtcgactgg cgcgaaccgc
     3241 acgtcatcct gcggctggag acgcggaacg gcaacggctc tcccgtcagc tggagcgtcg
     3301 aaacccggaa cccgcagggt ctggcgcagg ccgggctcaa tcgcgacgcg ttcaaggtgg
     3361 gcgaccggtt cagcgccacc gtgtgcgtgg ccaaggacgg gacccgctgg gcggtgacgc
     3421 acgagatcag ccggccgggc accccggccg gcgtcggcgt cggcggctgc tagcccttcg
     3481 acctgctacc cgacgacgcc ggccgcggcg atgtgcttcc tcgtcgcgat agcgccgccc
     3541 ca
//
LOCUS       DASSYW010000417         2490 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1685681, whole genome shotgun sequence.
ACCESSION   DASSYW010000417 DASSYW010000000
VERSION     DASSYW010000417.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2490)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2490)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2490
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1685681"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1380
                     /gene="rny"
                     /locus_tag="VFN38_06675"
     CDS             <1..1380
                     /gene="rny"
                     /locus_tag="VFN38_06675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004521 - RNA endonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease Y"
                     /protein_id="HET9011482.1"
                     /translation="GKEEVMRLREEAEQELRGRRGIVEQEERRINERESALERKAEAV
                     EQRDREIGRRASDFGRREKLVQTREEELEKLVAEERRRLEQMAGMSAQDAKNELIRRL
                     EEEAQADAANSLREIREGARRNAEREAKKIVALAIQRIAADTTAETTVSAVALPNDEM
                     KGRIIGREGRNIRAFELATGVDVIIDDTPDTVVVSCFDPIRREVARLALEKLVSDGRI
                     HPGRIEEVVNKSKKEVDAAIIETGEQAAYNTGVHGLHPELIKLIGRMKWRTSYGQNIL
                     QHSQEVAHLAGIMAAELGLDVAMAKRGALLHDVGKVLTHEHEGTHVQLGVEMATKYGE
                     HPLVVNCIAAHHDDVPHESEVSVLVQAADSISGSRPGARREAFETYVKRLEGLERIAS
                     SYKGVERVFAIQAGREIRVVVVPDDVDDGRMTTLSEEIARRIEAELQYPGQIKVVLIR
                     ETRAVDFAR"
     gene            1382..2278
                     /gene="folD"
                     /locus_tag="VFN38_06680"
     CDS             1382..2278
                     /gene="folD"
                     /locus_tag="VFN38_06680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004488 - methylenetetrahydrofolate
                     dehydrogenase (NADP+) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HET9011483.1"
                     /translation="MLSAGARLIDGAALAKRIRAEVARDVAALGARGVIPGLAVVLVG
                     EDPASAVYVGAKEKASREAGMAGETIRLPADSTQAQLLALVDRLNQDERVHGILVQMP
                     LPKQIDPDTVIRHIRPDKDVDGFHPVNVGKLLIGHTDGFAPCTPAGVQRMLMEYGVET
                     RGAECVVIGRSTIVGKPMAALMVQPGAGADATVTICHSRTRDLASHTRRADILIVAAG
                     RPRMVTADMVKPGAVVIDVGMNRVPDATTKSGTRLAGDVDFEGVRHVASLITPVPGGV
                     GPMTIAMLLHNTVRAASRTLAS"
     gene            2275..>2490
                     /locus_tag="VFN38_06685"
     CDS             2275..>2490
                     /locus_tag="VFN38_06685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011484.1"
                     /translation="MTRRRAAGTRTEPLPAAPSLFDAVEPAPPYAEVGDAFPGASPAS
                     AIAVSTLTQTVKDVVEGAFMPLWVRGEV"
BASE COUNT          404 a          846 c          940 g          300 t
ORIGIN      
        1 ggcaaggaag aggtgatgcg gctccgcgag gaggccgagc aggagctgcg aggccggcgc
       61 gggatcgtgg agcaggagga gcggcggatc aacgagcgcg agagcgccct ggaacggaag
      121 gccgaggcgg tggagcagcg cgaccgcgag atcggccggc gcgccagcga tttcggccgt
      181 cgcgagaagc tcgtccagac gcgggaggag gagctcgaga agctcgtcgc cgaggagcgc
      241 cggcgtctgg agcagatggc cggcatgtcc gcccaggacg ccaagaacga gctgattcgg
      301 cgcctggagg aggaggccca ggccgatgcc gccaactccc tgcgcgagat ccgagagggg
      361 gcgcgccgca atgccgagcg cgaggcgaag aagatcgtcg cgctcgccat ccagcgcatc
      421 gccgccgaca ccaccgccga gaccaccgtg tccgcggtgg cgctcccgaa cgacgagatg
      481 aaggggcgca tcatcggccg cgaggggcgg aacatccgcg ccttcgagct ggcgaccggt
      541 gtggacgtga tcatcgacga cacgccggac accgtggtgg tgtcgtgctt cgaccccatc
      601 cgccgcgagg tggcccggct ggcgctggag aagctcgtct ccgacggccg catccatccc
      661 ggccggatcg aggaggtcgt caacaagtcc aagaaggaag tggacgccgc catcatcgag
      721 acgggcgagc aggcggcgta caacaccggc gtccacggcc tgcacccgga gctcatcaag
      781 ctgatcgggc gcatgaagtg gcgcaccagc tacgggcaga acatcctcca gcattcgcag
      841 gaggtggccc acctggccgg catcatggcc gcggagctcg ggctcgacgt ggcgatggcc
      901 aagcgcggcg ccctgctgca cgacgtgggg aaggtgctca cccacgagca cgagggcacc
      961 cacgtgcagc tcggcgtcga gatggcgacg aagtacggcg agcacccgct cgtcgtgaac
     1021 tgcatcgccg cgcatcacga cgacgtgccg cacgagagcg aggtgtcggt gctcgtccag
     1081 gcggccgact ccatctccgg ctcgcggccc ggcgcgcggc gcgaggcgtt cgagacgtac
     1141 gtgaagcggc tcgaggggct cgagcgcatc gcctccagct acaagggagt cgagcgcgtg
     1201 ttcgccatcc aggcggggcg ggagatccgt gtggtcgtcg tgccggacga cgtggacgac
     1261 ggccgcatga ccacgctgtc cgaggagatc gcgcgccgca tcgaggccga gctccagtac
     1321 ccgggacaga tcaaggtcgt gctcatccgc gagacgcggg cggtggactt tgcccgctga
     1381 cgtgctgagc gcgggcgccc ggctcatcga cggggcggcg ctcgcgaagc ggatccgggc
     1441 ggaggtcgcg cgcgacgtcg cggcgctcgg cgcgcgcggc gtcatccccg gcctggccgt
     1501 cgtcctcgtc ggggaggacc cggcgagcgc ggtgtacgtc ggtgccaagg agaaggcctc
     1561 gcgggaagcg ggcatggcgg gggagacgat ccgcctgccg gccgacagca cccaggcgca
     1621 gctgctcgcc ctcgtcgacc ggctcaacca ggacgagcgg gtccacggca tcctcgtgca
     1681 gatgccgctg ccgaagcaga tcgatcccga cacggtgatc cggcacatcc ggcccgacaa
     1741 ggacgtcgac ggcttccacc ccgtgaacgt cggcaagctg ctcatcggcc acaccgacgg
     1801 cttcgcgccg tgcaccccgg cgggcgtgca gcgcatgctc atggaatacg gtgtggagac
     1861 gcgcggggcg gaatgcgtgg tgatcggacg gagcaccatc gtcggcaagc cgatggccgc
     1921 gctgatggtg cagcccggcg ccggcgccga cgcgaccgtc accatctgtc acagccgcac
     1981 gcgcgacctc gcgtcgcaca cgcgccgcgc cgacatcctg atcgtggcgg cggggcgtcc
     2041 gcgcatggtc acggccgaca tggtgaagcc gggcgcggtg gtgatcgacg tggggatgaa
     2101 ccgcgtgccc gacgccacga cgaagagcgg cacccgcctc gcgggggacg tggacttcga
     2161 gggggtgcgt cacgtggcct cgctcatcac gccggtgcca ggcggggtgg ggccgatgac
     2221 gatcgccatg ctgctgcaca acacggtgcg cgccgcgtcg cgcacgctcg cctcgtgacg
     2281 cgccgccgcg ccgccgggac gcgcaccgag ccgctccccg cggcgccctc gctgttcgac
     2341 gccgtcgagc ccgcgccgcc gtacgccgag gtgggcgacg cgtttcccgg cgccagcccc
     2401 gcgtcggcga tcgccgtctc gaccctcacc cagaccgtga aggacgtggt ggagggggcg
     2461 ttcatgccgc tgtgggtgcg cggcgaggtg
//
LOCUS       DASSYW010000418         3865 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_780233, whole genome shotgun sequence.
ACCESSION   DASSYW010000418 DASSYW010000000
VERSION     DASSYW010000418.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3865)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3865)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3865
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_780233"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..442
                     /locus_tag="VFN38_06690"
     CDS             <1..442
                     /locus_tag="VFN38_06690"
                     /inference="COORDINATES: protein motif:HMM:NF017394.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="nitrous oxide reductase accessory protein NosL"
                     /protein_id="HET9011485.1"
                     /translation="CARTSGPVPIAYGKADCEVCRMRISDERYGGEVVTLKGKVHQFD
                     SIECLASYVAASEPVAEARSIYVSDFERPGHLLPVAGALFVRRGGSGSPMGAGLLAVA
                     AQGDTAGVRARFGGELLTWSQVRALAASGALRPATGAPATPRAS"
     gene            444..1694
                     /locus_tag="VFN38_06695"
     CDS             444..1694
                     /locus_tag="VFN38_06695"
                     /inference="COORDINATES: protein motif:HMM:TIGR04247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrous oxide reductase family maturation
                     protein NosD"
                     /protein_id="HET9011486.1"
                     /translation="MRRPLLLGLLVCTASPVRAARAQERGEVTVSPAGPVRTVAAALA
                     LVRTGGRVVVEAGTYREPEIVVTRSVEIVGRGRPVLDGQGTHGILTIAADDVTVRGLR
                     LTRVGSSFVEDRAALRVRDARACVIRDNEIDDAFFGIYLANVTGCRLEGNVLQASNRR
                     ETTSGNGIHLWSSRGIVIADNRVTGFRDGIYFEFVRDTEVSRNVSEGNLRYGLHFMYS
                     DDCRYVGNAFRRNGSGVAVMYTHRVVMTDNRFESNWGSAAYGLLLKEISDARLERNLF
                     ARNTTGLVADGANRLVADRNDFVENGWAVKLEASTVDGELTRNNFIANSFDVATNSRE
                     PSTRMRGNYWDAYRGYDLNRDGVGDVPFRPVRLFSMIVERHEPALILLRSGFVELLDA
                     AERVLPALTPATLADAQPAMRRIR"
     gene            1691..2401
                     /locus_tag="VFN38_06700"
     CDS             1691..2401
                     /locus_tag="VFN38_06700"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HET9011487.1"
                     /translation="MIVATQLRKRFGAVEVLRGVDLRIARGRVTAIVGPNGAGKTTFI
                     KALLGLTRPDSGTLTFFGAPVAGDDAYRARIGYMPQIARFPENLTGHELLALLRDLRG
                     NPPVDERLLERFTLGDALRKPLRVLSGGTRQKINAAAAFLFAPPCYVLDEPTAGLDPI
                     AAGMLKERIREERAAGNTVILTTHIMSEIDELADDVVFLLDGRVAFSGALSALKRSAG
                     HDHLERAIAELMTREAVA"
     gene            2398..3267
                     /locus_tag="VFN38_06705"
     CDS             2398..3267
                     /locus_tag="VFN38_06705"
                     /inference="COORDINATES: protein motif:HMM:NF024091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HET9011488.1"
                     /translation="MTTQLAPDVASFAPALAGAGEPEVRPAGVIGKVARYQARDVARS
                     RWLAAYALFFALVTEALLRFAGADARSILSLATVVLYVVPLVTLVFGTIYLYNAREFI
                     ELLLAQPVARGRLFNGLYLGLALPLALAVAVRVGGPFLLHGLAAPGQGAMLGALLGVA
                     VALTGIFTAIAFCIALWADDRLKGLGTAIGVWMLGAIVYDGLVLAAVAAFADYPLERP
                     LLVLILANPIDLARVVMLLQLDVSALMGYTGAVFQQFLGGLTGTLAAAAALALWLAAP
                     LALGLRTFRRKDF"
     gene            3331..3783
                     /locus_tag="VFN38_06710"
     CDS             3331..3783
                     /locus_tag="VFN38_06710"
                     /inference="COORDINATES: protein motif:HMM:NF012355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /protein_id="HET9011489.1"
                     /translation="MMKSTRRAGLSALVLGVALLAGACSKEGAREGEQKGEEKREAQG
                     EAKGEGHGKVIVVEAYSDSAGNYFKPADFEVHRGDTIRFTLKSGVHNVHFLADSNPGK
                     TGLPPASDMLQIPGQTYDLPITLSEGRYYYQCDPHAALGMKGHIKVED"
BASE COUNT          533 a         1366 c         1406 g          560 t
ORIGIN      
        1 ctgtgcgcgc accagcggtc cggtgccgat cgcgtacggc aaggccgact gcgaggtgtg
       61 ccggatgcgg atcagcgacg agcggtatgg cggcgaggtg gtgacgctga agggcaaggt
      121 gcaccagttc gactccatcg aatgtctcgc cagctacgtg gcggcgtcgg agccggtggc
      181 ggaggcgaga tcgatctacg tgagcgactt cgagcggccc gggcacctgc tgcccgtggc
      241 gggcgcgttg ttcgtgcggc gcggcggcag cggaagcccc atgggggccg gcctgctggc
      301 ggtggccgcg cagggcgaca ccgcgggcgt gcgcgcccgg ttcggcggcg agctgctgac
      361 ctggagccag gtgcgcgccc tcgcggcgag cggtgcgctg cgaccggcga ccggcgcgcc
      421 ggccaccccg cgcgcgtcgt agcatgcggc gtcctctcct cctcggcctg ctcgtctgca
      481 ccgcgagccc ggtgcgggcg gcgcgcgcgc aggagcgcgg cgaggtgacg gtctcgcccg
      541 ccggcccggt acgcaccgtg gccgccgcgc tcgcgctcgt gcgcaccggc ggccgggtcg
      601 tcgtggaggc gggcacctac cgcgagccgg agatcgtcgt cacgcgctcc gtggagatcg
      661 tgggacgggg ccgtcccgtg ctcgacgggc aggggacgca cggcatcctc acgatcgccg
      721 cggacgacgt gacggtgcgg gggctgcgcc tcacgcgggt gggctccagc ttcgtcgagg
      781 accgcgcggc gctgcgggtg cgcgacgcgc gcgcctgcgt gatccgcgac aacgagatcg
      841 acgacgcctt cttcggcatc tacctggcca acgtcacggg atgccgcctg gagggcaacg
      901 tgctgcaggc ctccaaccgg cgcgagacga cgtcgggcaa cggcatccac ctctggtcgt
      961 cgcgcggcat cgtcatcgcc gacaaccggg tgaccggctt ccgcgacggg atctacttcg
     1021 agttcgtgcg cgacaccgag gtgtcgcgca acgtgagcga ggggaacctg cgctacgggc
     1081 tgcacttcat gtattccgac gactgccgct acgtgggcaa cgccttccgc cgcaacggct
     1141 cgggggtggc cgtgatgtac acccaccgcg tggtgatgac cgacaaccgc ttcgagtcca
     1201 actgggggag cgccgcgtac gggctgctgc tgaaggagat cagcgacgcg cgcctggagc
     1261 ggaacctgtt cgcccgcaac accacggggc tcgtggccga cggggccaac cggctcgtgg
     1321 ccgaccgcaa cgacttcgtg gagaacggct gggcggtgaa gctggaggcg agcacggtgg
     1381 acggggagct cacgcggaac aacttcatcg ccaacagctt cgacgtcgcc acgaacagcc
     1441 gcgagccgtc gacgaggatg cggggcaact actgggatgc gtaccgcggc tacgacctga
     1501 accgggacgg cgtgggcgac gtgcccttcc ggccggtccg cctcttctcg atgatcgtcg
     1561 agcggcacga gccggcgctg atcctcctgc gcagcggatt cgtggagctg ctcgacgccg
     1621 ccgaacgggt gctgccggcg ctcacgccgg cgacgctcgc cgatgcccaa cccgccatgc
     1681 ggaggatccg atgatcgtcg cgacccagct gcgcaagcgc ttcggcgcgg tggaggtgct
     1741 gcgcggggtg gacctgcgga tcgcccgggg ccgcgtcacg gccatcgtgg ggcccaacgg
     1801 cgcgggcaag accaccttca tcaaggcgct cctcgggctc acccgccccg attccggcac
     1861 cctcaccttc ttcggcgccc cggtggccgg cgacgacgcc taccgcgcgc gcatcggcta
     1921 catgccgcag atcgcgcgct tcccggagaa cctcaccggc cacgagctgc tggcgctgct
     1981 gcgcgacctg cgcggcaatc cgccggtgga cgagcggctg ctggagcggt tcaccctggg
     2041 cgacgcgctg cggaagccgc tgcgggtgct gtcggggggc acgcgccaga agatcaacgc
     2101 cgcggcggcc ttcctgttcg ccccgccctg ctacgtgctg gacgagccga cggccggcct
     2161 ggatccgatc gcggcgggaa tgctcaagga gcgcatccgc gaggagcgcg cggcgggcaa
     2221 caccgtgatc ctcaccaccc acatcatgag cgagatcgac gagctggccg acgacgtggt
     2281 gttcctgctg gacgggaggg tggcgttcag cggcgcgctg tcggcgctga agcgctcggc
     2341 gggccacgac cacctggagc gcgcgatcgc cgagctgatg acgcgcgagg cggtggcatg
     2401 acgacccagc tcgcccccga cgtcgcgtcg ttcgcgccgg cgctggccgg tgccggcgag
     2461 ccggaggttc ggcccgccgg cgtgatcggc aaggtggcgc gctaccaggc gcgcgacgtc
     2521 gcccggagcc gctggctcgc cgcgtacgcc ctcttcttcg ccctcgtcac cgaggcgctc
     2581 ctgcggttcg ccggggcaga cgcgcggtcg atcctcagcc tggcgacggt cgtgctgtac
     2641 gtcgtgccgc tcgtgacgct ggtgttcggc accatctacc tgtacaacgc gcgcgagttc
     2701 atcgagctgc tgctcgcgca gccggtggcg cgcgggcggc tgttcaacgg gctgtatctc
     2761 gggctggccc tccccctcgc gctggcagtc gccgtccgcg tgggcggccc cttcctgctg
     2821 cacggcctcg ccgcgccggg acagggcgcg atgctcggcg cgctcctcgg cgtcgccgtc
     2881 gccctcaccg ggatcttcac ggccatcgcc ttctgcatcg cgctgtgggc cgacgaccgg
     2941 ctgaaggggc tcggtaccgc gatcggcgtg tggatgctcg gcgccatcgt gtacgacggg
     3001 ctggtgctcg ccgcggtggc ggcgttcgcg gactacccgc tcgagcggcc gctgctcgtc
     3061 ctcatcctgg ccaacccgat cgacctcgcg cgggtcgtga tgctcctgca gctcgacgtc
     3121 tcggcactga tgggctacac gggcgccgtg ttccagcagt ttctcggcgg cctcacgggc
     3181 accctcgcgg cggcggccgc gctggcgctc tggctcgcgg cgccgctggc gctcgggctg
     3241 cgcaccttcc gccgcaagga tttctagcgc gaccatccac ggaggcgcgc acggcgcgcc
     3301 tccctcaatg caaccaggag agttttcgag atgatgaagt caacccgccg cgccggcctg
     3361 tcggcgctcg tgcttggcgt ggcgctgctg gccggcgcct gttccaagga aggcgcgcgc
     3421 gaaggcgagc agaagggcga ggagaagcgg gaggcgcagg gcgaggcgaa gggagaaggc
     3481 cacggcaagg tgatcgtcgt ggaggcgtac agcgactccg cgggcaacta cttcaagccc
     3541 gccgacttcg aagtgcatcg cggcgacacg atccgcttca ccctcaagtc gggcgtccac
     3601 aacgtccatt tcctcgccga ctccaacccc ggcaagacgg ggctcccccc cgccagcgac
     3661 atgctccaga tccccggcca gacgtacgac ctgccgatca ccctgagcga ggggcgctac
     3721 tactaccagt gcgaccccca tgccgcgctg ggcatgaagg gtcacatcaa ggtggaggac
     3781 tgaacccgct cgccggcgcc gttacggctt cttcaccggc accgacttgc ctcgctgggt
     3841 gtcagacggc ggcacgagca gcgga
//
LOCUS       DASSYW010000419         3582 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_426401, whole genome shotgun sequence.
ACCESSION   DASSYW010000419 DASSYW010000000
VERSION     DASSYW010000419.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3582)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3582)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3582
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_426401"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..301
                     /locus_tag="VFN38_06715"
     CDS             <1..301
                     /locus_tag="VFN38_06715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011490.1"
                     /translation="SHAVLKRPRAGDFRVQEEHGGSAEVLAPAPMIVAAASHVLSAAG
                     QMGTGSLYARVDGCIVRDAFMLMELELIEPTLYLGTSPAAADRLADALLARLPRP"
     gene            348..743
                     /locus_tag="VFN38_06720"
     CDS             348..743
                     /locus_tag="VFN38_06720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011491.1"
                     /translation="MTRSRKWLVAAWIFTAINVLGIGPALYMREGSHTLIHVVLALLG
                     MLAIQRLSSGGSDVRLGGTLAGRPSEISDRLTNLEQSVDAVAIEIERVGEGQRFMTRF
                     FTEQGLPRTPANAEPPKPGPPPAPSRHQD"
     gene            827..2629
                     /locus_tag="VFN38_06725"
     CDS             827..2629
                     /locus_tag="VFN38_06725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011492.1"
                     /translation="MSSLTTSRIVAGLVIGAAVIGVALFFSFAQALFYALFSDIGNRS
                     RALRDLVLDRNEAFVDQRLADFWAAREIEPRAPVVSELSRLSDAVESVGAPQVRVIAD
                     AERKIGMHLNALRSIQQPESLDTVSDRERLIESVSGTSLFSLGFLVLFTIAIGAVNSF
                     LLAIFFREVIGSYRVLPYPLPDLQASNLIALIIFVAEVATGWAIYRSGDRQTRPERAK
                     AAGAGFFAVIPWIMLGVLAIVELAAYSTLSLRVNLAQRLRLDAAGFVYPIAQYFLAFL
                     GIGLTLLLAYLGHAIAEGIAERRRSVLARQIITSLRRGKSNALAQVQQLRLLIERIRE
                     TTTHFPTTIVDDFMGQLGVAERREQVLQVVERFAMQALNAPNAFTSADVRSSYGRRVR
                     TRSQIWGDLILSATLALTLLLTGVLTASEVVSFLQEIGRDGPMWRFIAWAGGFAAPLT
                     LIGLGALGWNLARGLRYANPAAAALPARRGQMVLWWAVIFAGVAATVTLVAVAIAITF
                     GRYPFVFGGLAVLQAGILIGFAGFLDRGAVAILHLLQLAWLAAARVGALLLAGLASLL
                     ELLCFMLRIIVRLLAIPGDVLRGRAFEPSASVAR"
     gene            2626..3471
                     /locus_tag="VFN38_06730"
     CDS             2626..3471
                     /locus_tag="VFN38_06730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011493.1"
                     /translation="MSRAVRHGKVPVPALVTIGVVAVLAVLVARPGSHPRTETSQAVR
                     ADSTMVSDSAQVASPNLPAPAGQSDPPVGEFYYLVDVSASTKDVGEGSAFAEGISLLQ
                     PIFASLREMKEISPQRHRVATIGAMSLRPAPRCDIYVAAQTLFSADDNAALATRAMGA
                     CDREFRALTPEPHTDISGALVNAGLSLQGKRKALRGIMLITDLEEDTAPGTVPGRPDL
                     RGTCVAVFTLVTPASARDPQLLNARTSEWTNKLRGWGARNVYSANARGFDATDLRNFF
                     QSCEG"
BASE COUNT          482 a         1291 c         1234 g          575 t
ORIGIN      
        1 cagtcacgcc gtgctcaagc gcccgcgcgc gggcgacttc cgcgtgcagg aggagcacgg
       61 cggcagcgcg gaggtgctcg cgccggcgcc catgatcgtc gcggcggcga gccacgtcct
      121 ctccgccgcc gggcagatgg gcaccggatc gctctatgcc cgcgtcgacg gctgcatcgt
      181 gcgcgatgcc ttcatgttga tggagctcga gctgatcgag ccgacgctgt acctcggcac
      241 ctcgcccgcg gccgccgatc gcctggccga cgccctgctg gcacgcctcc cccgcccatg
      301 aaacaccgga tatcgccccg cgtacggtta atcatcggag gaccccaatg acacggtcca
      361 ggaagtggct cgtggcggcg tggatcttca ccgccatcaa cgtgctcggc atcggccccg
      421 cgctctacat gcgcgaggga tcccacaccc tgatccacgt ggtgctggcg ctactcggca
      481 tgctcgccat ccagcgcctg tcgtccggtg ggagcgacgt gcgcctcggc ggcacgctcg
      541 ccggccgccc gagcgagatc agcgaccgcc tcaccaacct cgagcagtcg gtcgacgccg
      601 ttgcgatcga gatcgagcgt gtgggcgaag gccagcgctt catgacgcgc ttcttcaccg
      661 agcagggact cccgcggacg ccggccaacg ccgagccgcc caagcccgga ccgccccccg
      721 caccctcccg gcaccaggac tgagcccgcc gtgaccgcct ctcgcggcga ggcgtcctat
      781 tgtataggtc tcggcgcacg gccaaggagg cattctggaa tcgctcgtgt catcgctgac
      841 caccagccgc atcgtggccg gcctcgtgat cggcgccgcc gtgatcggcg tcgccctctt
      901 cttctccttc gcgcaggcgc tcttctacgc cctgttctcc gacatcggga accggtcgcg
      961 cgcgctgcgc gacctcgtcc tcgaccgcaa cgaggcgttc gtggaccagc gcctcgccga
     1021 cttctgggcg gcgcgcgaga tcgagccgcg cgcaccagtc gtctccgagc tctcccgcct
     1081 gagcgacgcc gtggagtcgg tgggcgcgcc gcaggtgcgc gtcatcgccg acgccgagcg
     1141 caagatcggc atgcacctca acgcgctgcg cagcatccag cagccggaga gcctcgacac
     1201 ggtgtcggat cgcgagcggc tgatcgagtc ggtgagcggg acgtcgctgt tcagcctcgg
     1261 ctttctcgtc ctgttcacga tcgccatcgg cgcggtcaac tccttcctcc tcgccatctt
     1321 cttccgcgaa gtgatcggca gctaccgcgt gctgccgtat ccgctccccg acctccaggc
     1381 gtcgaatctc atcgcgctca tcatcttcgt ggccgaagtg gccacggggt gggcgatata
     1441 tagaagtggc gaccgccaga cgcgtcccga gcgcgcgaaa gccgccggcg ccggtttctt
     1501 cgccgtcatc ccgtggatca tgctcggcgt gctcgccatc gtggagctgg cggcgtactc
     1561 cacgctgtcg ctgcgcgtga acctcgccca gcgcctgcgc ctcgacgccg ccggcttcgt
     1621 ctatcccatc gcgcagtact tcctcgcctt cctcggcatc ggcctcaccc tgctcctcgc
     1681 gtatctcggc cacgcgatcg cggaagggat cgccgagcgg cggcggtcgg tgctggcgcg
     1741 gcagatcatc acgtcgctgc ggcggggcaa gagcaacgcg ctggcgcagg tgcagcagct
     1801 ccgtctgctg atcgagcgca tccgcgagac gacgacgcac ttcccgacga cgatcgtcga
     1861 cgacttcatg gggcagctcg gggtcgccga gcggcgcgag caggtgctcc aggtggtgga
     1921 acggttcgcc atgcaggcgc tcaacgcgcc gaatgccttc acgtcggccg acgtgcgcag
     1981 ctcgtacggc aggagggtgc gcacgcgaag ccagatctgg ggcgacctga tcctctcggc
     2041 gacgctcgca ctgacgctgc tgctcaccgg cgtgctcacg gcctcggagg tggtgtcgtt
     2101 cctgcaggag atcgggcggg acggcccgat gtggcgcttc atcgcgtggg ccggcggctt
     2161 cgcggcgccg ctcacgctga tcgggctggg cgcgctcggc tggaacctcg cgcgcgggct
     2221 gcgctacgcg aacccggcgg cggcagcgct gccggcgcga cgcggacaga tggtgctctg
     2281 gtgggccgtc atcttcgccg gtgtggccgc cacggtgacg ctcgtcgcgg tcgcgatcgc
     2341 catcaccttc gggcgctatc cgttcgtctt cggcggacta gctgtgctcc aggcggggat
     2401 cctgatcggc ttcgccggct tcctcgaccg cggcgcggtc gcgatcctgc atctgctcca
     2461 actcgcctgg ctggcggcgg cgcgcgtggg cgcgctgctg ctggcggggc tggccagcct
     2521 tctcgagctc ctgtgcttca tgctgcgaat catcgtgcgc ctgctcgcca tccccggtga
     2581 cgtcctgcgc ggtcgcgcct tcgagcccag cgcgtcggtg gcccgatgag ccgcgccgtg
     2641 cgacacggca aggtgccggt gcccgcgctg gtgacgatcg gcgtcgtcgc ggtgctggcg
     2701 gtgctcgtcg cgcgtccggg gagccatccg agaacggaaa cgtcccaggc cgtccgtgcg
     2761 gactcgacga tggtgagcga ctcggcacag gtcgcgtcgc ccaacctgcc cgcgccggcg
     2821 gggcagagcg atccgccggt gggcgagttc tactatctgg tggacgtctc ggcgtcgacg
     2881 aaggacgtgg gcgaagggag cgcgttcgcg gaggggatct cgctcctcca gccgatcttc
     2941 gcgtcgctgc gtgagatgaa ggagatctcg ccgcagcggc atcgcgtggc gacgatcggc
     3001 gcgatgagcc tgcggccggc gccgcgctgc gacatctacg tcgccgcgca gacgctgttc
     3061 agcgccgacg acaacgccgc gctcgcgacg cgggcgatgg gggcgtgcga tcgcgagttc
     3121 cgcgcgctca cgccggagcc gcacacggac atcagcgggg cgctggtgaa cgccggcctg
     3181 tcgctccagg ggaagcgcaa ggcgctgcgc gggatcatgc tgatcacgga cctggaggag
     3241 gacaccgcac cgggcaccgt tccgggccgc ccggacctcc gcggcacctg cgtcgccgtg
     3301 ttcacgctgg tgacgccggc gtcggctcgc gatccgcagc tgctcaacgc gcggacgagc
     3361 gaatggacga acaagctgcg cgggtggggc gcccggaacg tgtactccgc gaacgcgcgc
     3421 ggcttcgacg ccacggacct caggaacttc ttccagtcct gcgaagggta gcacgcgggt
     3481 ctgctttcga tcgtgcgtcc ggtcgcggac attcccgccg ccggcgggac tcgacgccgc
     3541 aaactgccgc ggcgcgagac gccggctctg ggaacgcccg ct
//
LOCUS       DASSYW010000420         2246 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_814257, whole genome shotgun sequence.
ACCESSION   DASSYW010000420 DASSYW010000000
VERSION     DASSYW010000420.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2246)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2246)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2246
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_814257"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2246)
                     /locus_tag="VFN38_06735"
     CDS             complement(<1..>2246)
                     /locus_tag="VFN38_06735"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HET9011494.1"
                     /translation="VGQDVLADPFTAISAIPAATSAVRDMTDVRMEVPRFLAEKCTGC
                     AQCWTQCPDAAIPGLVSEPEAVLATAVGFAQKRGPVDRLRPILKPLGAELRRTVGAGE
                     FRGMRDALARAWETVAPKLNLDAAKRGALDEELRLVSEALDGIQLARSGTFWDNPERK
                     QAGSGGLLSITINPEACKGCNLCVEVCPDGALEAVRQDDSIVAALRDRWAFWQKLPDT
                     PQRFLTVSDIDEGIGVLPTLLLRKDSYRSMAGGDGACMGCGEKTAVHLIVSSIEAMMR
                     PRVERYVAELDRTIARLDTKARELLASDAELEALLPSGDAPLQVPLETTKRRELDRIR
                     GVLRDLKALRWRYVEGPGGQGRASMAMANSTGCSSVWASTFPYNPYPFPWANHLFQDS
                     PSLAIGVFEGHMRKMADGFAQVRRARAILDDEYDAERTERELGELDWRTFTDDEFAMC
                     PPIIAMGGDGAMLDIGFQNLSRLMASGKPIRVVVLDTQVYSNTGGQACTSGFTGQVSD
                     MAWYGADQHGKTEMRKELALIALAHRGVFVHQSSQASASHLMAGVLRGLQKRRPAVFN
                     IYTPCPVEHGLADDMAQHAARLALESRAFPYLTFDPDAGRTWAECLTLDGNPSVEDDW
                     PTYTLEYVDESGTAQSMELPLTIADWAATETRFRKHFKPVRGAAPADGRELCPFHEYL
                     ALSPDERADRTPFIYVLDAAKRLDRWTVSAEIVGLAEERQLHWAQLRELAGLTVAEPT
                     RERVRATM"
BASE COUNT          314 a          838 c          761 g          333 t
ORIGIN      
        1 ccatcgtggc acgcacccgc tcgcgcgtcg gttccgccac agtcagcccc gccagctcgc
       61 gaagctgcgc ccagtgaagc tgccgctcct ccgccagccc gacgatctcc gcgctcaccg
      121 tccaccggtc gagccgcttc gcggcgtcca gcacatatat gaaaggcgtc cggtcggcgc
      181 gctcgtcggg ggagagcgcc aggtattcgt ggaaggggca cagctcacgc ccgtcggccg
      241 gcgccgcgcc gcggaccggc ttgaaatgct tccggaagcg cgtctccgtg gccgcccagt
      301 cggcgatcgt gagcggcagc tccatcgact gcgcggtccc gctctcgtcc acgtactcca
      361 gcgtgtacgt cggccagtcg tcctccaccg atgggttgcc gtcgagagtc aggcactcgg
      421 cccacgtgcg gccggcgtcc ggatcgaacg tgagatacgg gaaggcgcgg ctctcgagcg
      481 ccaggcgcgc ggcatgctgc gccatgtcgt cggcgagacc atgctccacc ggacagggcg
      541 tgtagatgtt gaacacggcg ggccggcgct tctggagccc ccggagcacg ccggccatca
      601 ggtgcgaggc ggacgcctgc gaggactggt ggacgaacac gccgcggtgc gcgagggcga
      661 tcagcgccag ctccttgcgc atctccgtct tgccatgctg gtccgcgccg taccacgcca
      721 tgtccgagac ctggccggtg aagccgctcg tgcacgcctg gcccccggtg ttggagtaca
      781 cctgggtgtc gagcaccacc acccggatcg gctttccgga ggccatcagc cgcgagaggt
      841 tctggaagcc gatgtcgagc atcgccccgt cgccgcccat ggcgatgatg ggcggacaca
      901 tcgcgaactc gtcgtcggtg aaggtgcgcc agtcgagctc ccccagctcg cgctcggtgc
      961 gctcggcatc gtattcgtcg tcgaggatgg cccgcgcgcg ccgcacctgg gcgaagccgt
     1021 cggccatctt gcgcatgtgg ccctcgaaca cgccgatggc cagcgacggg ctgtcctgga
     1081 agaggtggtt cgcccacggg aacgggtacg ggttgtacgg gaaggtgctg gcccacaccg
     1141 atgagcagcc ggtgctgttg gccatcgcca tcgacgcgcg cccctgcccg cccgggccct
     1201 ccacgtagcg ccagcgcagc gccttgaggt cgcgcagcac gccgcgaatg cggtcgagct
     1261 cccgccgctt cgtcgtctcg aggggcacct gcagcggtgc gtcgcccgag gggagcagcg
     1321 cctccagctc cgcatccgac gcgaggagct cgcgcgcctt cgtgtccagc cgggcgatgg
     1381 tccggtcgag ctccgccacg taccgctcca cgcgcggccg catcatggcc tcgatgctgg
     1441 agacgatcag gtgcacggcg gtcttctccc cgcagcccat gcacgcgccg tcgcccccgg
     1501 ccatcgaccg gtagctgtcc ttcctcagca gcagcgtcgg aagaacgccg atcccctcgt
     1561 cgatgtcgga cacggtgagg aaccgctgcg gcgtgtcggg gagcttctgc cagaaggccc
     1621 agcggtcacg cagcgccgcc acgatgctgt cgtcctgccg caccgcctcg agcgcgccgt
     1681 cggggcacac ctccacgcag aggttgcatc ccttgcaggc ctcgggattg atggtgatcg
     1741 agaggagccc gcccgagccg gcctgcttgc gttccggatt gtcccagaag gtgccggagc
     1801 gcgcgagctg gattccgtcc agcgcctcgg acacgagccg cagctcctcg tccagcgcgc
     1861 cccgcttcgc ggcgtcgagg ttgagcttcg gcgccaccgt ctcccacgcc cgcgccagcg
     1921 cgtcgcgcat gccccggaac tcgccggccc ccaccgtgcg ccgcagctcg gcgcccagcg
     1981 gcttcaggat gggccggagc cgatcgacgg gaccgcgctt ctgggcgaac cccaccgccg
     2041 tggccagcac ggcctccggc tcgctcacca gcccggggat ggcggcatcc ggacactgcg
     2101 tccagcactg cgcgcagccg gtgcacttct cggccaggaa gcgcggcacc tccatccgca
     2161 cgtcggtcat gtcgcgcacc gcgctcgtcg ccgcggggat ggcgctgatc gcggtgaacg
     2221 gatcggccag cacgtcctgg cccacc
//
LOCUS       DASSYW010000421         3768 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1824629, whole genome shotgun sequence.
ACCESSION   DASSYW010000421 DASSYW010000000
VERSION     DASSYW010000421.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3768)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3768)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3768
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1824629"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..967)
                     /locus_tag="VFN38_06740"
     CDS             complement(<1..967)
                     /locus_tag="VFN38_06740"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HET9011495.1"
                     /translation="MVHLRAITAVILAGSVVGADTKGLVIDTGAFTVFVENMDRSLAF
                     YHDVFEMEVPPLPDTGARPYNPPNPGLFAFFDIPGAKERHQSARVAGIRTTVEAMEIQ
                     QVGHKTVPLRIQDPGNATLVLMVRNVDATLARVTKAGYPVVTTGGTPVALDDGTRAVV
                     VRDVDNRFIELRQPPSIPASAPAHNIVDIHVMLTVADLPRTTRVYRDVFGFTVEGERT
                     AFVPDRPTQLLSGLKDAKARWARAKARDSQMWLEFIEFSGVDRTPLKMKIQDRGATRL
                     QLRTQNIEAVVEAARRAGLTIATQGGKATPIPPNFLGALIADPNNF"
     gene            1001..2602
                     /locus_tag="VFN38_06745"
     CDS             1001..2602
                     /locus_tag="VFN38_06745"
                     /inference="COORDINATES: protein motif:HMM:NF012363.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylesterase/lipase family protein"
                     /protein_id="HET9011496.1"
                     /translation="MIRVPSRRAFVKDAAAWLAVAQTAQWASLAAAEGPGVVAPTSAG
                     RVRGTVNSGINVFKGIPYGGPTNGKNRFMPPLKPLPWTGVRDALAYGPTAPQALGRAR
                     RGVPPEGEDCLVLNVFTPALGSGRRPVMVWLHGGGFSYGTGSDAILEGSNLARTGDVV
                     VVTINHRLNVFGYTYVGEAGGDDFAASGAAGMLDIVAALEWVHDNIDRFGGDPNVVTI
                     FGQSGGGRKVATLMAMPSAKGLFHRAIIESGAVLRLTEKADAVRTTELLMTQLGLSKG
                     QVRQLQDVPMTRLLEAYDAISAKVPTREPGQTANSPTVDGKAIPAHPWDPAGPALSSR
                     IPLMIGWARTEETLYDRPTPETLALDEAGLRKRASARLGENPERVIAAFREAHPDATP
                     WDLWILIATDHPRGTYSRETARRKAAQKAAPAYLYRFDWETPEGGGHMRSPHTVEIPF
                     VFSNIAIAGPLISKMPEAYDLAKKVSASWVAFARTGDPNVSGLPKWPAYDATSRETML
                     FNNTSRVEKDPDRGPRLVMEKLLKL"
     gene            complement(2599..>3768)
                     /locus_tag="VFN38_06750"
     CDS             complement(2599..>3768)
                     /locus_tag="VFN38_06750"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HET9011497.1"
                     /translation="LTNQVVLIAGEKITAVGPAASVSIPAGARVIDLSRATVLPGLID
                     AHTHMFNDPVQGWSPEKMTLMAVSNLQADLYSGITSARDMGSHSNGYADVDVRDMINE
                     GEIDGPRFQVAGRGIVWGAQPQKPGTTPNPRSAIVVRSAEEGRAAVREHIEKKVDHIK
                     LYPGGAYSFSPTGEDLYQTQYPLDVLTAIIDETHKSGRKAGCHVYGGEGLQNAITAGC
                     DTIEHGYGLRQPQLDEMARKGIAYDVTFARYSSPYMDDNDAKSTGGKYRIVPIYERAM
                     KMAIATPKLAVLFGTGVDGTYFPHGTNTVELEKLVKQGGMTTVRAIQTATVTNATMMG
                     WQNEVGSIAVGKFADLAAVSGDPLADITELQRVRFVMKGGKVIRNDLPGAPTGTR"
BASE COUNT          557 a         1261 c         1316 g          634 t
ORIGIN      
        1 agaagttgtt cggatccgcg atgagggcgc cgaggaagtt cggtggaatc ggcgtggcct
       61 ttccgccctg cgtggcaatc gtcagaccgg cccgcctggc cgcttcgacg accgcttcga
      121 tgttctgcgt gcggagctgc agccgcgtgg cgccgcggtc ctgaatcttc atcttcagcg
      181 gggtgcgatc gacgccgctg aactcgatga actccagcca catctgcgag tcccgcgcct
      241 tcgcacgggc ccagcgcgcc ttcgcgtcct tcaggccgct caagagctgc gtcggccgat
      301 cgggcacgaa ggccgtccgt tcgccttcca ccgtgaagcc gaagacgtcg cgatacaccc
      361 gggtggtccg cggcagatcg gccacggtga gcatcacgtg gatgtccacg atgttgtgcg
      421 ccggggcgga cgcggggatc gacggcggct ggcggagctc gatgaagcgg ttgtccacgt
      481 cgcggacgac caccgcgcgc gtgccgtcgt cgagcgccac cggtgtgccg ccggtcgtga
      541 cgacggggta accggccttg gtgacgcgcg cgagcgtggc gtccacgttc cgcaccatca
      601 gcaccagcgt ggcgttgcct ggatcctgga tgcgcagcgg cacggtcttg tgcccgacct
      661 gctggatctc catcgcttcc acggtggtgc ggatgccggc gacgcgcgcc gactggtgcc
      721 gctctttggc gcctgggatg tcgaagaagg cgaagagccc gggattggga gggttgtagg
      781 ggcgcgcgcc cgtgtccggc agcggcggca cctccatctc gaagacgtcg tggtagaagg
      841 ccagcgagcg gtccatgttc tcgacgaaca ccgtgaaggc gcccgtgtcg atgacgagcc
      901 ctttggtgtc ggcgccgacg acgctgccgg ccaggatgac cgccgtgatt gccctgaggt
      961 gcaccatgcc tgtattctcg cgcagcgcga ggagggtgga atgatacgcg tccccagccg
     1021 gagagctttc gtcaaagacg ccgcggcgtg gctcgcggtc gctcagaccg cccagtgggc
     1081 cagcctggcc gcggccgaag ggcccggcgt cgtcgcgcct acttctgccg gccgcgttcg
     1141 cggcaccgtc aactccggca tcaacgtgtt caagggcatt ccgtacggcg gtccgaccaa
     1201 cggcaagaac cgcttcatgc cgccgctcaa gccgctgccg tggaccggcg tgcgcgatgc
     1261 gctcgcgtac ggacccaccg ccccgcaggc gctcggccgc gcgcgccgcg gcgtgccgcc
     1321 ggagggcgag gactgtctcg tgctgaacgt cttcacgccg gcccttggca gcggtcggcg
     1381 gccggtgatg gtctggctgc acggcggcgg cttctcgtac ggcaccggct ccgacgccat
     1441 tctcgaaggc agcaatctgg cgcgcaccgg cgacgtcgtg gtcgtcacga tcaaccatcg
     1501 gttgaacgtg ttcggctaca cctacgtcgg cgaagcggga ggggacgact tcgccgcgtc
     1561 gggcgccgcc gggatgctcg acatcgtcgc ggcgctcgaa tgggtgcacg acaacatcga
     1621 ccgcttcggc ggcgatccca acgtcgtgac catcttcggc cagtccggcg gcggccggaa
     1681 ggtggcgacg ctgatggcga tgccgtcggc gaaggggctg tttcaccggg cgatcatcga
     1741 aagcggcgcc gtgttgcgcc tgaccgagaa ggccgacgcg gtgcgcacca ccgagctgtt
     1801 gatgacacag ctcggcctgt cgaaagggca ggtgcgccag ctgcaggacg tgccgatgac
     1861 gcgcctgctc gaggcgtacg acgcgatctc ggcgaaggtc cccacacgcg agcccggcca
     1921 gacggcgaat tctccgacgg tggacggcaa ggccattccg gcgcatccgt gggatcccgc
     1981 aggacccgcg ctgtcgtcgc gcattccgct gatgattggg tgggctcgca ccgaggaaac
     2041 gctgtacgac cggccgacgc cggaaacgct ggcgctcgac gaggcgggac tgcgaaagcg
     2101 ggcgagcgcg cgactgggcg agaatcccga gcgcgtgatc gcggccttcc gcgaggcgca
     2161 tccggacgcg acgccctggg acctctggat cctgattgcg accgatcacc cgcgcggcac
     2221 ctactcgcgc gagaccgccc ggcgcaaggc ggcgcagaag gccgcgcccg cctatcttta
     2281 tcgcttcgac tgggagacgc cggagggcgg cggccacatg cgatcgccgc acacggtgga
     2341 gattccgttc gtcttcagca acatcgcgat cgccggccca ctcatctcga agatgcccga
     2401 ggcctacgac ctggcgaaga aggtgagcgc gtcgtgggtg gcgtttgcgc gcacggggga
     2461 tccgaacgtg tccggcctgc cgaagtggcc ggcctacgat gccacgtcgc gcgaaacgat
     2521 gctcttcaac aacacgagcc gcgtcgagaa ggatcccgat cgcggcccgc gtctggtgat
     2581 ggagaagctg ctgaagctct aacgcgtgcc ggtgggggct cccggcaggt cgttgcgaat
     2641 gaccttgccg cccttcatca cgaagcggac gcgctgcagc tcggtgatgt cggccagcgg
     2701 atcgccggac acggccgcca ggtccgcgaa cttgccgacg gcgatcgacc cgacctcgtt
     2761 ctgccacccc atcatcgtgg cgttggtaac cgtggccgtc tggatggcgc gcactgtcgt
     2821 catgccgccc tgcttgacca gcttctcgag ctcgacggtg ttcgtgccgt gcgggaagta
     2881 ggtgccgtcc acgccggtgc cgaacagcac ggcgagtttc ggagtggcga tcgccatctt
     2941 catggcgcgc tcgtagatcg ggacgatccg gtactttccg ccggtgctct tcgcgtcgtt
     3001 atcgtccatg tacggcgagc tgtagcgcgc gaaggtcacg tcgtaggcga tccccttcct
     3061 ggccatttcg tcgagctggg gctgccgcag gccgtagccg tgctcgatgg tgtcgcaccc
     3121 cgcggtgatc gcgttctgca gcccctcgcc gccgtacacg tggcaccccg ccttgcggcc
     3181 gctcttgtgc gtctcgtcga tgatggccgt cagcacgtcg agggggtact gcgtctggta
     3241 caggtcctcg ccagtcgggc tgaaggagta ggcaccgcct ggatacagct tgatgtgatc
     3301 gaccttcttc tcgatgtgct cgcggaccgc cgcgcgcccc tcttcggccg agcggaccac
     3361 gatggccgag cgcgggttgg gcgtggtgcc aggcttctgc ggctgagcgc cccacacgat
     3421 gccgcggccc gccacctgga agcgcgggcc gtcgatctcg ccctcgttga tcatgtcgcg
     3481 cacgtccacg tccgcgtagc cgttgctgtg cgagcccatg tcgcgtgccg acgtgatgcc
     3541 gctatacagg tcggcctgca ggttcgagac cgccatgagc gtcattttct ccggcgacca
     3601 cccctgcacg gggtcgttga acatgtgcgt gtgcgcgtcg atgagcccgg gcagcacggt
     3661 ggcgcggctc agatcgatga cgcgcgcgcc ggccggaatg ctgactgacg ccgcggggcc
     3721 gacggcggtg atcttctcgc cggcgatcag caccacctgg ttggtcag
//
LOCUS       DASSYW010000422         2088 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_699780, whole genome shotgun sequence.
ACCESSION   DASSYW010000422 DASSYW010000000
VERSION     DASSYW010000422.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2088)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2088)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2088
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_699780"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1527..2051
                     /locus_tag="VFN38_06755"
     CDS             1527..2051
                     /locus_tag="VFN38_06755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011498.1"
                     /translation="MTRRITAAAAASIVALGVAGAASADSGHSAKTYEASLAAVNPAA
                     TTAGLATVAGRAQLVDGKKRNKVSLHMRNLAAGTMYLWHVHEGSCAATGAPVAGWSYR
                     TQVGGNGTLTSSESGNANTKGKSATFNADPPKSYSVNVHVSAATNGLPAGTIIACGDL
                     TTSMAGGKNKPKTP"
BASE COUNT          329 a          711 c          749 g          299 t
ORIGIN      
        1 catggatctg caactcgtcg ccgagtccgg cctccttgcc gctcaccgtc agcgtgtcgc
       61 cgtcgcggct gatgctgaaa gcgttgttga tgaagtgcgg actgccggcg agggcggccg
      121 gtgcggccag ggccgcggcg gcgataacac cgagggctac caacaggatc cttcgcatgg
      181 ggctctcctc tcggggtgtc ctcccgtgga tcccctgccg ctactgcgat gggttccggc
      241 ccgctcgcgc cgcagggaac gcgcgcctgg ctcgggccat cgagggggac tgcggctgcg
      301 ggcggtgcga ccggcgggca cgtcagcctc ctgcgtgatc gtgaggagct gtgttcgcca
      361 cgtgaacatc gaccgtcgcc gcagtcaagg gtgaggttcg tgctgcgggc agcctcatgg
      421 cgctcgggcg gacctgccag gaacaagccc atcgtgacct gtcagcgata tgacgcggaa
      481 aaccgctatc ccttcgaggt gtcgcctcgc cacctcggcg tgagcggtat ccatgacggc
      541 gacggcgacg gcgacggcga cggcgatggc gacgaggctg gcgctcggca cccgggatac
      601 ccactccgat gccggacgcc gatcgtcgcg tcgccagttc cgagccgatc tgcggcgcgg
      661 gtctgcatgc ggcaccggcg gcggctccgc gggcgatcgc tgggactcga ccgaacgcgc
      721 ggtcgggcgt agggtcggtc cgttctcttc cgaatggagg ccgggaatgt tcgcgcgtgt
      781 cgcgaggttc gagggtggcg aggcggaggc attgcggcgc tctgccaagg aggtcaacga
      841 ggccgccggc gagggccgcc gcccggcgtc ccggcggtcg ggttctcatg ctcatcgaca
      901 ccgagtctgg tcggagtctc ggtatcggcc tgttcgagac cgaggaggat ctcccgcaag
      961 ggcgacgccg cgctgagcga gatgagcccg agcagcgcgg acgtcggtac gcggacctcg
     1021 gtggagacct acgcggtggg cgccgacctt cgtatgcccg cgcgcgccgc gtagtcacgc
     1081 gcggcgccac gccgggggtt tacgcacgag gcgccgcatg cgaaagagcg cgacggtggc
     1141 actcacctgc cagtgatcta gctgggcgag gggcacccct acgccgtcgc ggtcccggag
     1201 tccggcgtcg tggtggtccg caaaggcgcc gggacgcctg ggcggcacgc acgctccgcc
     1261 ggggaagcag gcgcgagctc ggcgcgggtc tgcacgaccg cgtgtcgcgc gagcgggcca
     1321 acgggcgccc aacagggcct catggaccaa agggcgctgg cgttgctcgg cggtagcact
     1381 cgacatcgtc caggcagttg ctctacctct tcgagcgctg ctcacccgac cgcgcacaac
     1441 gccaagcttc caaccatcga tccgatcggt gggtgggtta gtcagacgag acgcatctcg
     1501 gactgaacga ccacaggagg gaattcatga cccgccgtat caccgccgcc gcggcggcgt
     1561 cgatcgtcgc gctgggcgtc gccggcgcag cgagcgccga cagcggtcac tccgccaaga
     1621 cctacgaggc ttcgctggcc gccgtcaatc ccgccgccac caccgccggc ctggcgaccg
     1681 tcgcgggcag ggcgcagctg gtcgacggta agaagcgcaa caaggtcagc ctgcacatgc
     1741 gcaatctcgc cgccggcacg atgtatctgt ggcacgtgca cgagggcagc tgcgccgcca
     1801 ccggcgcacc ggttgccggc tggagctacc gcacgcaggt cggggggaac gggacgctga
     1861 cgtccagcga gtccggcaac gcgaacacga agggcaagtc ggcgacgttc aacgccgatc
     1921 cccccaagag ctactccgtg aacgtgcacg tctcggcggc caccaacggc ctccccgcgg
     1981 gcacgatcat cgcctgcggt gacctgacta cgagtatggc cggcggcaag aacaagccca
     2041 agacgccgta gcactccgac tacagcctgc gcgtttgatc gcggcagc
//
LOCUS       DASSYW010000423         3588 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1572370, whole genome shotgun sequence.
ACCESSION   DASSYW010000423 DASSYW010000000
VERSION     DASSYW010000423.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3588)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3588)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3588
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1572370"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1012)
                     /locus_tag="VFN38_06760"
     CDS             complement(<1..1012)
                     /locus_tag="VFN38_06760"
                     /inference="COORDINATES: protein motif:HMM:NF012492.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HET9011499.1"
                     /translation="MTPRPGTDAPLPIDDVLASLRDALDTHRGVVLQAPPGAGKTTRV
                     PLALLDAPWLAGRRLVMLEPRRLAARAAARRMALTLGEPAGETIGFRVRGETRVSART
                     RIEVVTEGVLTRMLQSDPSLEGIGVLVFDEFHERSVHADLGLALALQAQELLRPDLRL
                     LVMSATLDGDAVAALLGDAPVVTSGGRAHPVDVRYLGRRDDQRIEGAVASAVRRALAS
                     GEGSVLAFLPGAGEIRRTLELLDDGSLPLDVRLHPLYGDLPSEAQDAAIAPARPDERK
                     VVLATSIAETSLTIDGVSVVVDSGVSRVPRFSPRSGMTRLETVRVSRASAEQRCGRAG
                     RTA"
     gene            1070..1273
                     /locus_tag="VFN38_06765"
     CDS             1070..1273
                     /locus_tag="VFN38_06765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011500.1"
                     /translation="MGKFEVFRSTQVTTDCDECGGRVDLIKGGVCVRCRRILCYRHLH
                     GSFVRRLLTDLGAATLCVRCRAR"
     gene            1275..1991
                     /locus_tag="VFN38_06770"
     CDS             1275..1991
                     /locus_tag="VFN38_06770"
                     /inference="COORDINATES: protein motif:HMM:NF012900.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HET9011501.1"
                     /translation="MDAAAALLRGANGGVRVKICCIATPAEADLAISSGADALGLVSA
                     MPSGPGPIPEADIATIVRHVARRAATVLLTSRQDASSIAAQLDRIAPTVVQLVDELPE
                     RAYDALRASHPDVVLMQVIHVRDAASVREAARVAPHVDAILLDSGNPNAAVKELGGTG
                     RVHDWTISRAIRDAVHVPVFLAGGLRASNVAEAIAAVRPFGVDVCSGVRVDGRLDADA
                     VHRFIAAARGVTPTPTGGER"
     gene            1988..2473
                     /locus_tag="VFN38_06775"
     CDS             1988..2473
                     /locus_tag="VFN38_06775"
                     /inference="COORDINATES: protein motif:HMM:NF016130.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF411 domain-containing protein"
                     /protein_id="HET9011502.1"
                     /translation="MNETKVTRRELLASLAGSITAALALTTLLPATARGDGTPKITVY
                     KDPSCGCCTKWVEHLRAAGFSPAVQDRSDMDELKDSLGVPARLRSCHTAVAGKYVIEG
                     HVPAADIKRLTMRAPKGIVGVAVPDMPAGAPGMEMPGRRDRYDVIAFFANGTTSVFAR
                     H"
     gene            2536..3249
                     /locus_tag="VFN38_06780"
     CDS             2536..3249
                     /locus_tag="VFN38_06780"
                     /inference="COORDINATES: protein motif:HMM:NF022750.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3108 domain-containing protein"
                     /protein_id="HET9011503.1"
                     /translation="MPSVATAQRDAEVAEREPIPFRVGEQLVYQVKYGRLPIGRASMS
                     VLGIEDVRGRPSYHVAFRLDGGLPGLQVHDSYESWLDTATLASRRHVQEIREVRYRRT
                     TRYEIYPEEQKYRENDEDSLRASVSSPLDEGSFVYFIRTVRVPVGQTREFHQYFKPDR
                     NPVVIRALRRDTVEVPSGRYPTVVVRPSIRARGLFAEDGEAELWFSDDSRRMLVQLRS
                     RFAGFSLSLYLTEVRSGVP"
     gene            3306..>3588
                     /locus_tag="VFN38_06785"
     CDS             3306..>3588
                     /locus_tag="VFN38_06785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011504.1"
                     /translation="MRPQPMPTTDPTDSAHPTALHQQLCAAITRRSLVMFDYADLIRV
                     VEPHRYGVNSAGHLMLSGWLRAGYSRSDPAGGWRNYLVRDIQSFQVLDAP"
BASE COUNT          536 a         1268 c         1245 g          539 t
ORIGIN      
        1 gggcggtccg ccccgcacgg ccacaccgct gctccgccga cgcacgcgac actcgcaccg
       61 tctccagccg agtcatcccc gatcgtgggg agaagcgcgg cacgcgcgat acgccgctgt
      121 ctaccaccac gctcacgcca tcgatcgtca ggctcgtctc ggcgatggac gtcgcgagca
      181 ccaccttgcg ctcgtccggg cgcgcaggcg cgatggcggc gtcctgcgcc tcggacggca
      241 ggtcgccgta cagcggatgc agccgcacgt ccaggggcag ggatccgtcg tcgagcagct
      301 cgagcgtgcg acggatctcg ccggcgccgg gcaggaaggc gagcacgctc ccttccccgc
      361 tcgcgagcgc acgccgaact gcggatgcca ccgcaccctc gatgcgctgg tcgtcgcgcc
      421 ggccgagata ccggacgtcc acgggatgcg cccggccgcc actggtgacc acgggcgcgt
      481 cgccgagcag cgcggcgacc gcatcgccat ccagcgtcgc ggacatgacg agcagccgca
      541 gatcggggcg caacagctcc tgcgcctgga gcgcaagcgc gaggccgaga tcggcgtgca
      601 cgctgcgctc gtggaactcg tcgaacacca gcaccccgat cccctcgagc gacgggtccg
      661 actggagcat ccgcgtgagc acgccctcgg tgaccacttc gatgcgcgtg cgcgccgaca
      721 cccgcgtctc gccgcgcacg cggaaaccga tcgtctcccc cgcgggctcg ccgagcgtga
      781 gggccatgcg ccgcgcggcg gcgcgggcgg cgagtcgtcg cggctcgagc atgacgagac
      841 gccgtccagc gagccatggc gcatcgagga gcgccagggg cacgcgcgtc gtcttgcccg
      901 cacccggcgg cgcctggagc accacgccac gatgcgtgtc gagcgcatca cggagcgatg
      961 cgagcacgtc gtcgatcggc aggggcgcgt cggttccagg gcgaggcgtc atgcgcggaa
     1021 atctatcctg cgctgttccg cggccgccgc ggacaccaga ttgtaccgca tgggaaagtt
     1081 cgaggtattc cgcagcacgc aggtcacgac ggattgtgac gaatgcggcg ggcgggtgga
     1141 tctgatcaag ggcggggtgt gcgtgcgctg ccggcgcatc ctctgctacc ggcacctgca
     1201 cggatcgttc gtgcgccgac tcctcacgga tctcggcgcc gccaccctgt gcgtgcgctg
     1261 tcgtgcgcgc tgacatggat gcggccgctg cgctcctgcg cggcgccaac ggcggtgtcc
     1321 gggtgaagat ctgctgcatc gccacacccg ccgaggccga tctcgccatc tcctccggcg
     1381 ccgacgcgct cgggctggtg tcggcgatgc cgagcggccc ggggcccatc ccggaggccg
     1441 acatcgccac catcgttcgc cacgtggcgc ggagagccgc caccgttctc ctcacctcgc
     1501 gccaggatgc gtcgagcatc gccgcgcagc tcgaccgcat cgcgcccacc gtggtgcagc
     1561 tcgtggacga gctgccggaa cgggcttacg acgcgctgcg tgcgtcgcat ccggacgtgg
     1621 tgctcatgca ggtgatccac gtccgtgacg ccgcgtccgt ccgcgaagcg gcgcgtgtgg
     1681 caccgcatgt cgacgcgatc ctcctcgact ccgggaatcc caacgccgcc gtgaaggagc
     1741 tcggaggtac cggacgcgtc cacgactgga cgatcagccg cgccatccgc gacgccgtgc
     1801 acgtgccggt gttccttgcg ggcggactgc gcgcgagcaa tgttgccgag gcgatcgctg
     1861 cggtgcgacc tttcggtgtc gacgtgtgca gcggcgtgcg cgtcgacgga cgactggatg
     1921 ccgacgccgt gcaccgcttc atcgccgccg cgcgtggcgt gacgccgacg ccgactggag
     1981 gggaacgatg aacgaaacga aggtcacgcg tcgcgagctg ctcgcgtcgc tcgcaggctc
     2041 catcaccgcc gcgctggcgc taaccacgct gctgccggcc accgcgcgcg gcgacggtac
     2101 gccgaagatc acggtgtaca aggaccccag ctgcggctgc tgcaccaagt gggtcgagca
     2161 cctgcgggcc gccggattct cgcccgcggt ccaggaccgg tccgacatgg acgagctcaa
     2221 ggacagcctc ggcgtgccgg cgcgacttcg gtcgtgtcat accgccgtcg ccggcaagta
     2281 cgtgatcgaa ggtcacgtcc ccgccgcgga catcaagcgg ctgaccatgc gcgcgccgaa
     2341 gggcatcgtc ggcgtggccg tgcccgacat gcccgcgggc gccccgggga tggagatgcc
     2401 cggacgccgt gaccggtacg acgtgatcgc ctttttcgcc aacgggacga cgtcggtgtt
     2461 cgcgcggcac tgatgcagcc ggcgtggcgc cgcggttcgc ttttcgcagg agcacttggc
     2521 gtcgcgctcg cgggcgtgcc gtcggtcgcc acggcgcaac gcgatgcgga agtggcggag
     2581 cgggaaccga ttccgtttcg cgtcggtgag cagctggtgt accaggtgaa atacggccgc
     2641 ctgccgatcg gccgggcgag catgtcggtg ctcggcatcg aggatgtgcg tggacggccg
     2701 tcgtatcatg tcgcgttccg tctcgacggc gggttgcccg ggctgcaggt gcacgacagc
     2761 tacgagagct ggctggacac cgcgacgctt gcctcgcggc ggcatgtgca ggagattcgc
     2821 gaggtgcgct atcggcgcac gacgcgctac gagatctatc ccgaggagca gaagtaccgg
     2881 gagaacgacg aggattcgtt gcgggcgagc gtctcgtcgc cgctggacga aggatcgttc
     2941 gtgtacttca tcaggacggt gcgcgtcccc gtcgggcaga cgcgcgagtt ccaccagtac
     3001 ttcaagcccg atcggaaccc ggtagtcata cgggcactcc ggcgcgacac ggtcgaggtg
     3061 ccgtccgggc ggtacccgac cgtcgtcgtg cgtccgtcca tccgtgcgcg cggactgttc
     3121 gccgaggatg gtgaggccga gctctggttc agcgacgact cgcgtcgcat gctcgtgcag
     3181 ctgcgcagcc ggttcgccgg cttctccctc tcgctctatc tcaccgaggt acgttcgggc
     3241 gtgccgtgac gcaccggtgc gccggtccgc ttctcgcagc gagtccaggc atcccatatt
     3301 cgtcgatgag gcctcagccg atgcccacga ccgatccgac cgacagcgcg caccccaccg
     3361 ccctgcatca gcagctctgt gccgcgatca ccaggcgctc gctcgtgatg ttcgactacg
     3421 cagacctgat ccgcgtcgtc gaaccacatc gctacggggt gaacagcgcc ggccatctca
     3481 tgctcagcgg atggctgcga gccggctaca gccgatccga tccggcgggc ggatggcgca
     3541 actacctcgt gcgagacatc cagtcattcc aggtgctgga cgcgccct
//
LOCUS       DASSYW010000424         2586 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1442085, whole genome shotgun sequence.
ACCESSION   DASSYW010000424 DASSYW010000000
VERSION     DASSYW010000424.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2586)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2586)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2586
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1442085"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..739)
                     /locus_tag="VFN38_06790"
     CDS             complement(<1..739)
                     /locus_tag="VFN38_06790"
                     /inference="COORDINATES: protein motif:HMM:NF014671.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory
                     sulfurtransferase FdhD"
                     /protein_id="HET9011505.1"
                     /translation="MRVERAFDRHIGSAEIERVGDGSRRRERDELAVEEPLEIRVDGE
                     PLAVTMRTPGEDEELAAGFLAGEGLIAGPGDVVSAGPSEDLAANVVEVRTRAGLRRDP
                     GGERRFYLSSSCGVCGKGALEFVAQAAPPSPPSEPLTEAVVLAVPEAARRAQSAFDRT
                     GGLHATALFDAAGELLVVREDVGRHNAMDKAIGSMLLAGRFPLAGLYACLSGRASFEL
                     VQKASLAGLAGIVAVGAPSTLAASLAND"
     gene            791..>2586
                     /locus_tag="VFN38_06795"
     CDS             791..>2586
                     /locus_tag="VFN38_06795"
                     /inference="COORDINATES: protein motif:HMM:NF013927.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0017000 - antibiotic biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin acylase family protein"
                     /protein_id="HET9011506.1"
                     /translation="MRRGIKGGVAALICALVAVPAAEARVRKAGSVLPPGQSGFVPLS
                     GVPSGTGSPHLTDQTALFVGFGFKDYGFNQPGDSESPKPGVTIVRDSSYGVPAVTAGS
                     DSDAWFGAGYAAAQDRLFQLELFRRATRGRLAEILGKGYLEMDIKARRDFYTDGELDQ
                     QLARLPPQLRARFDSYRDGINAWIAKTRSDPSLLPGEFAAVGEPTGPRDWEVRDSAAI
                     GVYLARTVPSDDGEELNNLRALRQLGATNFDKLLPIRTKGQIATVPAANGAFPSQPGR
                     TLRQERAAYKATRGWQADVELPVEKKETAAAKARQSFIGIGRHGGSNMWAIRSKGRTA
                     SLFNGPQLGFQIPELFIELEIHAPGLDVRGATAPGVPVLGLGHNDHVAWGITSGLSDD
                     DDLYVEKLTAPERYRYKGQDREMSCRDEKFDYRPPPTSVLDLDPGSAGAGSQTERICR
                     TVHGPVQERAGGNAFARRYAIWGREVDSLEGLSMVNAAKSIKDVERGVAKLTWNENLM
                     AADDRGNIGYWHPGLLQVKPRGFDERLPYPGTGEAEWRGLLPVSKRPHVVNPKQGYLF
                     NWNNMPSTGWTQGDAPARERLAGPLHRAGWLER"
BASE COUNT          379 a          975 c          928 g          304 t
ORIGIN      
        1 ggtcgttcgc aagcgaggcc gcgagcgtgg aaggagcccc caccgccact atcccggcga
       61 gcccggcgag gctggccttc tggaccagct cgaacgacgc gcggccgctc aggcacgcat
      121 acagcccggc gagcgggaac cgcccggcta gcagcatcga cccgatcgcc ttgtccatcg
      181 cgttatggcg gcccacgtcc tcgcgcacca cgagcagctc gcccgcggcg tcgaacagcg
      241 ccgtggcgtg aaggccgccg gtgcggtcga acgcgctctg ggcgcgccgt gcggcctcgg
      301 gcacggccag caccaccgcc tccgtgagcg gctcggacgg cggcgagggc ggcgcggcct
      361 gcgccacgaa ctcgagcgcg cccttcccgc acaccccgca cgacgagctg aggtagaagc
      421 gccgctctcc tccggggtcg cggcggagcc cggcgcgcgt gcgcacctcc accacgttcg
      481 cggcgaggtc ctcgctcggc cccgccgaga cgacgtcgcc ggggccggcg atcagcccct
      541 cccccgccag gaagccggcg gcgagctcct cgtcctcgcc cggggtgcgc atggtcacgg
      601 ccagcggctc gccgtccacg cggatctcga gcggctcctc cacggccagc tcgtcgcgct
      661 cgcgccggcg cgagccgtcc ccgacgcgct cgatctcggc gcttccgata tgtcggtcga
      721 acgctcgctc cacgcgcaca tggtgactat cggctcgcga gcagcacagc gcgggtaggc
      781 tcccgcgccg atgcggaggg ggatcaaagg gggggtggcg gcgctgatct gcgctctggt
      841 cgccgtgccg gcggcggagg cgcgcgtgcg caaggcgggc agcgtgctcc cgcccggcca
      901 gtcgggcttc gtgccgctga gcggcgtgcc gtccggcact gggtcgccgc acctcaccga
      961 ccagaccgcg ctgttcgtcg gattcggctt caaggactac ggcttcaacc agcccggcga
     1021 cagcgagtcg cccaagccgg gcgtgacgat cgtgcgcgac tcgagctacg gcgtgcccgc
     1081 cgtcaccgcc ggcagcgaca gcgacgcctg gttcggggcg ggctacgcgg cggcccagga
     1141 ccggctgttc cagctcgagc tgttcaggcg cgccacgcgc ggccggctgg ccgagatcct
     1201 cggcaagggc tacctcgaga tggacatcaa ggcgcggcgc gacttctaca cggacggcga
     1261 gctcgaccag cagctcgcgc ggctgccccc ccagctgcgc gcgcggttcg actcctaccg
     1321 cgacgggatc aacgcctgga tcgcgaagac gcgcagcgac ccgagcctgc tccccggcga
     1381 gttcgccgcg gtcggtgagc ccaccggccc gcgcgactgg gaggtgcgcg actcggcggc
     1441 gatcggcgtg tacctcgcgc gcacggtgcc gagcgacgac ggcgaggagc tgaacaacct
     1501 gcgcgccctg cgccagctcg gcgcgaccaa cttcgacaag ctgctgccga tccgcacgaa
     1561 ggggcagatc gccaccgtcc cggccgcgaa cggcgcgttc ccctcgcagc ccggccgcac
     1621 gctgcgccag gagagggcgg cctacaaggc cacgcggggg tggcaggcgg acgtggagct
     1681 gccggtggag aagaaggaga ccgccgcggc caaggcgcgc cagagcttca tcggcatcgg
     1741 gcgccacggc ggctcgaaca tgtgggcgat ccggagcaag ggcaggaccg cgtcgctgtt
     1801 caacggccca cagctcgggt tccagatccc ggagctgttc atcgagctcg agatccatgc
     1861 gccggggctc gacgtgcgcg gcgccaccgc gcccggggtg ccggtgctcg gcctcggcca
     1921 caacgaccac gtcgcgtggg gcatcacctc gggcctgagc gacgacgacg acctctacgt
     1981 cgagaagctc accgccccgg agcgctaccg ctacaagggc caggaccgcg agatgagctg
     2041 ccgcgacgag aagttcgact accggccgcc gcccacctcg gtgctcgacc tcgaccccgg
     2101 ctccgccggc gccgggtcgc agacggagcg catctgccgc accgtccatg gccccgtgca
     2161 ggagcgcgcc ggcgggaacg cgttcgcgcg ccgctacgcc atctggggcc gcgaggtgga
     2221 cagcctcgag gggctctcga tggtgaacgc cgcgaagagc atcaaggacg tggagcgcgg
     2281 cgtggccaag ctcacctgga acgagaacct gatggccgcc gacgaccggg gcaacatcgg
     2341 ctactggcac cccggcctgc tccaggtcaa gccgcgcggc ttcgacgagc ggctgcccta
     2401 cccgggcacg ggcgaggcgg agtggcgcgg cctgctgccc gtgtcgaagc gcccgcacgt
     2461 ggtgaacccg aagcagggct acctcttcaa ctggaacaac atgccgtcca ccggctggac
     2521 ccagggcgac gcgcccgcgc gcgagcgcct cgcgggcccg ctccaccgcg ccggctggct
     2581 cgagcg
//
LOCUS       DASSYW010000425         2379 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_961135, whole genome shotgun sequence.
ACCESSION   DASSYW010000425 DASSYW010000000
VERSION     DASSYW010000425.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2379)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2379)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2379
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_961135"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..163)
                     /locus_tag="VFN38_06800"
     CDS             complement(<1..163)
                     /locus_tag="VFN38_06800"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HET9011507.1"
                     /translation="MIRFFNVTKHYAKTGTAVHDVSLHVGKGEFVFLTGPSGAGKTTL
                     LKMVYMEERP"
     gene            complement(160..1311)
                     /locus_tag="VFN38_06805"
     CDS             complement(160..1311)
                     /locus_tag="VFN38_06805"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HET9011508.1"
                     /translation="MAGPIITTPGEPAERRRVERRGNSRVGDLTLPEVRRILITTLLG
                     AIVLGLFFWMVKSVVVAAILGLIIGFYIRPLHLRLLPRLGNANLSAIVTLLLVILPVL
                     LVLAYSYSEMADVVSYAATHQDEIVTKVDAAMKRVPFFNDARFSSSLGNMVVSATAFG
                     ARLPVILKAAVKDFSISATIFLFTAFYILIEAEKVGTYIASKIPPRYAELRGALETNV
                     RGVLYGAIYSTLLTQTMKSLIILFMNLAFGVPLAGALAVISFIIGFFPIVGSWSVYVP
                     VAIWLVIFRDAVGSAIAMIVIGTLVNTVFISTYLRPKIAAERSKVLNFYWMFVALITG
                     VYTFGLAGILLGPILIGLLKAVIDTVTARSSWQILELDDVEDAPAMRQA"
     gene            complement(1311..>2379)
                     /locus_tag="VFN38_06810"
     CDS             complement(1311..>2379)
                     /locus_tag="VFN38_06810"
                     /inference="COORDINATES: protein motif:HMM:NF013237.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HET9011509.1"
                     /translation="PLVQSASYVQEVGTSEGLRYPRYGNTPNAEIVQRRLAALEKAEA
                     GLLLSSGMAATACALLALLRPGDHVLACRWIYGGTMTLLTQEFASLGIQVTLADPLES
                     RAWRKRLKKETRAIFIESPVNPTCRVLDLKPISHIAQAEGLALVVDSTFASPVNFRPI
                     EHGADVVIHSTTKYLNGHHDMVGGAVLGTASYVEEVRQKMMLWGGAPDPFACWLLERG
                     LKTLDVRVRRQNENAMRIAQWCADRKEVKVVHYPGLPTHPDHQIAPAQMSGFGGMLAL
                     ELAGGGRGAERFIRKLRLIRHAPSLGGVDSLVSEPRHNSHAHLSAEERARLGIPDGFL
                     RLSIGIEDADDLIADIEQALH"
BASE COUNT          394 a          799 c          819 g          367 t
ORIGIN      
        1 tcggccgctc ctccatgtag accatcttca gcagcgtggt cttgccggcg ccgctgggcc
       61 ccgtgaggaa cacgaactcg cccttgccga cgtggagcga gacatcgtgg accgcggtgc
      121 cggtcttcgc gtagtgcttg gtgacgttga agaaccggat catgcctgcc gcatcgcggg
      181 cgcgtcctcc acgtcgtcca gctccaggat ctgccagctc gagcgcgccg tcaccgtgtc
      241 gatgaccgcc ttgaggagcc cgatcaggat ggggccgagc aggatgcccg ccagcccgaa
      301 ggtatagacg cccgtgatca acgccacgaa catccagtag aagttcagca ccttcgaccg
      361 ctcggcggcg atcttcggcc gcaggtacgt cgagatgaac acggtgttca cgagcgtccc
      421 gatgacgatc atcgcgatcg ccgagcccac cgcgtcgcgg aagatcacga gccagatcgc
      481 gaccggcacg tagacgctcc acgagccgac gatggggaag aacccgatga tgaacgagat
      541 cacggccagc gcgccggcga gcggcacgcc gaacgccagg ttcatgaaga ggatgatcag
      601 cgacttcatc gtctgcgtga gcagcgtcga atagatcgcg ccgtagagca cgccccgcac
      661 gttcgtctcg agcgcgccgc gcagctcggc gtaccgcggc gggatcttgc tggcgatgta
      721 cgtgccgacc ttctccgcct cgatcaggat gtagaaggcg gtgaagagga agatcgtcgc
      781 cgagatggag aagtccttca ccgccgcctt gaggatgacg gggaggcgcg cgccgaacgc
      841 cgtggcggag acgaccatgt tgccgagcga gctgctgaag cgcgcgtcgt tgaagaaggg
      901 cacccgcttc atcgcggcgt ccaccttcgt gacgatctcg tcctggtgcg tcgcggcgta
      961 ggagacgacg tccgccatct cgctgtagct gtacgccagc accagcagca ccggcaggat
     1021 caccagcagc agcgtgacga tcgccgacag gttggcgttg ccgagccgcg gcagcagccg
     1081 caggtgcagc gggcggatgt agaacccgat gatgaggccg aggatcgcgg ccaccacgac
     1141 ggacttcacc atccagaaga agagccccag cacgatcgcg ccgagcagtg tcgtgatgag
     1201 gatccggcgc acctcgggca acgtgaggtc gccgacgcgc gagttgccgc gccgctccac
     1261 gcgccgccgc tcggccggtt ctcctggtgt cgtgatgatc ggaccagcca tcagtgcagt
     1321 gcctgctcga tgtcggcgat gaggtcgtcg gcatcctcga tgccgatgct cagtcgcagg
     1381 aagccgtccg ggatgcccag ccgggcgcgc tcctcggcgg aaaggtgtgc gtgcgagttg
     1441 tgccgcggct cgctcacgag ggagtctaca ccgccgaggc tcggcgcgtg ccggatcaac
     1501 cgcagcttgc ggatgaaccg ctccgccccg cggccgccgc cggccagctc cagcgcgagc
     1561 atgccgccga acccgctcat ctgcgccggg gcgatctggt ggtccggatg ggtgggcagg
     1621 ccggggtagt gcacgacctt gacctccttg cggtcggcgc accactgggc gatccgcatg
     1681 gcgttctcgt tctgacgccg gacgcgcacg tcgagcgtct tgagcccgcg ctcgagcagc
     1741 cagcaggcga acggatcggg cgcgccgccc cacagcatca tcttctggcg cacctcctcc
     1801 acgtacgagg cggtgcccag cacggcgccg cccaccatgt cgtggtgccc gttcaggtac
     1861 ttcgtcgtcg agtggatcac cacgtcggcg ccgtgctcga tcgggcggaa gttcaccggg
     1921 ctcgcgaacg tggagtccac gacgagcgcg agcccctccg cctgggcgat gtggctgatc
     1981 ggcttgaggt cgagcacccg gcacgtcggg ttgaccggcg actcgatgaa gatcgcgcgc
     2041 gtctccttct tgaggcgctt gcgccacgcg cggctctcga gcgggtcggc gagcgtgacc
     2101 tggatgccca gcgaggcgaa ctcctgcgtg agcagcgtca tcgtgccgcc gtagatccag
     2161 cggcaggcga gcacgtgatc gccggggcgc agcagggcga ggagcgcgca cgcggtggcg
     2221 gccatgccgc tcgacaacag gaggcccgcc tccgccttct ccagcgcggc gaggcggcgc
     2281 tggacgatct cggcgttcgg cgtgttgccg tagcgggggt agcgcagccc ttcgctcgtg
     2341 ccgacctcct gcacgtagct cgcactctgc acgagcggc
//
LOCUS       DASSYW010000426         2279 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_999096, whole genome shotgun sequence.
ACCESSION   DASSYW010000426 DASSYW010000000
VERSION     DASSYW010000426.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2279)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2279)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2279
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_999096"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..412
                     /locus_tag="VFN38_06815"
     CDS             <1..412
                     /locus_tag="VFN38_06815"
                     /inference="COORDINATES: protein motif:HMM:TIGR04178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="exosortase/archaeosortase family protein"
                     /protein_id="HET9011510.1"
                     /translation="VAEACSGLRSLTALISLGVLLGGIALRHPLSRVLLIAIAIPVAI
                     LINGVRVFLTGFLVFFVSPELGQGFMHTTEGWLLFVTAFAALGVFALVLRWVERRLMG
                     HEDGPLPPSDDADAPPAGLLPDSGSSYAQASANA"
     gene            405..1079
                     /locus_tag="VFN38_06820"
     CDS             405..1079
                     /locus_tag="VFN38_06820"
                     /inference="COORDINATES: protein motif:HMM:NF023410.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EpsI family protein"
                     /protein_id="HET9011511.1"
                     /translation="MRDRIRWAPGLVLAAGCILMGAGSTQHQVPPAAPLTSLPTEIGG
                     YKGRDEVVPEDQRQVAGMSDYVMRIFSRDSSDIFSVYVGYYDYQVQGKTIHSPKNCLP
                     GAGWETMQESTARVTTGGRTYPVKRYLLANGGARAMVYYWYQGRGRIEANEYRVKWDL
                     LRDAALRGRTEEALVRVVVPVAPPADRSPAAEAAVLADADRIAVTAAERMIPEVDRVM
                     PRAAGA"
     gene            1091..2248
                     /locus_tag="VFN38_06825"
     CDS             1091..2248
                     /locus_tag="VFN38_06825"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HET9011512.1"
                     /translation="MPESVSGAAPRVRVLLVGPSLDILGGQAVQAARLLAHLRDLPGL
                     EVGFLAVNPRLPGPLRLLQRVKYLRTVVTSVAYVASLLREVPRWDVVHAFSASYWSFL
                     LAPLPAMAVAKLYGKRVVLNYRSGEAADHLARAGRTAVPAMRRLADVIAVPSGYLVTV
                     FGRFGLRARSIFNFVDLGGIPWRERAAPPRPHFLSNRNFEPLYNVACVLRAFQRIQAE
                     VPEARLTVAGYGSQDGALRALAGELALRNVEFTGRVPPERMPALYDAADVYLNAPDID
                     NMPNSVIEAYAAGLPVVTTDAGGIPYIVRHGETGLMVPRGDDAALAAAALRLLREPEL
                     ARGLARRAREECVAKYTWDAVRHEWADLYAGLAPRAAAAVTGNVAAQGVRG"
BASE COUNT          274 a          896 c          773 g          336 t
ORIGIN      
        1 cgtcgccgag gcgtgcagcg gactccgctc gctcaccgcc ctcatcagcc tcggcgtcct
       61 gctcggcggc atcgcgctcc gccacccgct gagccgcgtg ctcctgatcg ccatcgcgat
      121 ccccgtcgcc atcctgatca acggcgtgcg cgtcttcctg accggcttcc tcgtcttctt
      181 cgtcagtccg gagctgggcc agggcttcat gcacaccacc gaggggtggc tgctcttcgt
      241 caccgccttc gccgcgctcg gcgtcttcgc gctcgtgctg cgctgggtcg agcggcgcct
      301 gatgggccac gaggacggcc cgcttcctcc ctcggacgac gccgacgcgc cccccgcggg
      361 cctgcttccg gactccggtt cctcctacgc ccaggcgagc gccaatgcgt gaccgaattc
      421 gctgggcacc ggggctcgtc ctcgccgccg gctgcatcct catgggcgcc ggcagcacgc
      481 agcaccaggt gccccccgcc gcccccctca ccagcctccc gaccgagatc ggcggctaca
      541 aggggaggga cgaggtggtg ccggaagacc agcggcaggt cgccgggatg tcggattacg
      601 tgatgcgcat cttctcgcgc gactcctccg acatcttcag cgtctacgtc ggctactacg
      661 actatcaggt gcaggggaag acgatccact cccccaagaa ctgcctgccc ggcgccggct
      721 gggagacgat gcaggagagc accgcccgcg tgacgaccgg cggacgcacc tatccggtga
      781 agcgctacct gctcgccaac ggcggggcgc gcgccatggt ctactactgg taccaggggc
      841 gcggccgcat cgaggcgaac gagtacaggg tgaagtggga cctcctgcgc gacgcggccc
      901 ttcgcggacg caccgaggag gcgctcgtcc gcgtcgtcgt ccccgtcgct ccccccgccg
      961 accgctcgcc ggcggcggag gccgccgtcc tcgccgacgc cgaccggatc gccgtgacgg
     1021 ccgccgagcg gatgatcccg gaggtggacc gggtgatgcc gcgcgccgcc ggcgcctgag
     1081 cggcggagcg atgcccgagt cggtgtccgg cgccgccccc cgcgtgcgcg tcctcctcgt
     1141 cgggccgtcg ctcgacatcc tcggcggaca ggcggtgcag gcggcgcggc tcctcgccca
     1201 cctgcgcgac ctgccgggac tcgaggtcgg cttcctcgcc gtcaatccgc gcctcccggg
     1261 cccgctccgg ctgctgcagc gggtgaagta cctgcgcacc gtcgtcacct cggtcgccta
     1321 cgtggcttcc ctgctgcgcg aggtgccgcg atgggacgtc gtccacgcct tctcggcgtc
     1381 gtactggtcg ttcctcctcg cccccctccc ggcgatggcg gtcgcgaagc tctacggaaa
     1441 gcgcgtcgtt ctcaactacc ggagcggcga ggccgccgac catctggcgc gcgccggccg
     1501 caccgcggtg ccggcgatgc gccgcctggc cgacgtcatc gccgtgccgt cgggctatct
     1561 ggtgacggtc ttcgggcgct tcggactgcg cgcccgttcg atcttcaact tcgtggacct
     1621 cggcggcatc ccctggcgcg agcgcgccgc cccgccgcgt ccacacttcc tcagcaaccg
     1681 gaacttcgag ccgctctaca acgtggcctg cgtgctgcgc gccttccagc gcatccaggc
     1741 cgaggtgccc gaggcgcgac tgacggtggc cggctacggg tcgcaggacg gggcgctgcg
     1801 cgccctcgcc ggcgagctcg cgctccgcaa cgtggagttc accggacgcg tgccccccga
     1861 gcggatgccg gccctctacg acgcggccga cgtctacctc aacgctcccg atatcgacaa
     1921 catgccgaac tcggtgatcg aggcgtacgc ggccggcctc ccggtggtga ccaccgacgc
     1981 cggcggcatc ccctacatcg tgcgccacgg cgagacgggg ctgatggtgc cgcgagggga
     2041 cgacgccgcg ctcgccgccg ccgcgctccg cctgctccgc gagcccgagc tcgcccgcgg
     2101 gctggcgcgg cgggcgcggg aagagtgcgt cgcgaagtac acctgggacg ccgtccgcca
     2161 cgagtgggcc gatctctacg ccggcctcgc gccgcgcgcg gcggccgccg tcaccggcaa
     2221 cgtcgccgct cagggggtcc gtggctgagc cgacgcgtcc cgcgcgctcc ccctcgggg
//
LOCUS       DASSYW010000427         2479 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_815151, whole genome shotgun sequence.
ACCESSION   DASSYW010000427 DASSYW010000000
VERSION     DASSYW010000427.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2479)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2479)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2479
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_815151"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1236)
                     /locus_tag="VFN38_06830"
     CDS             complement(<1..1236)
                     /locus_tag="VFN38_06830"
                     /inference="COORDINATES: protein motif:HMM:NF012562.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011513.1"
                     /translation="MPLTLDYTNMMAPPIDGGITQAEWRDAGARFASAHAGVTALHAG
                     GTLGFLDLPDDGALHRQTLDYVARARARSGAAALTDVVVLGIGGSALGPIALRTALRP
                     PQWNLLDDAARGGHPRLHVLDNVDPANIAALLTRLDLGKSLFIVTSKSGGTAETMAQY
                     LVVRGRLAAALGDAAAKERLVFVTDPEKGALRAIARAEGIAALDIPSNVGGRFSVLTP
                     VGLLPAALMGIDTGALLAGAAAMRTRCASATLGANIAGTFAALQHLADTTHGRHVQVL
                     MPYSDALRDMAAWFVQLWAESLGKHRTTGDAGVGPTPLAALGATDQHSQVQLFMEGPP
                     DKTVTFIGVTQGSSDVEIPALHADIPELAYLGGHQLGELLDIERRATAGALARRGRPN
                     MTLTLERVDPFHVGELLMLL"
     gene            complement(1244..2020)
                     /locus_tag="VFN38_06835"
     CDS             complement(1244..2020)
                     /locus_tag="VFN38_06835"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HET9011514.1"
                     /translation="MRLTFLGTGTSFGVPQLGCGCAVCRSPDPRDERSRVGAAVETDA
                     GAVLLIDTPPELRLQLVRAQLARVDAVLYTHGHADHTHGIDDLRAITARRDVHLPMYG
                     AADTLDELARKFAYIFDDNIRPLPGTSKPQGRAIPMAGGETVRIADVDVTAVPVPHGA
                     VTVFAYRIGPLAYVTDAKSVPADALALLRGARVLVVNALFRQPHPSHLSLGEALRVAG
                     EVGAERTYLTHLTHDNFHADLEAELPAGVAPAFDGLTITV"
     gene            complement(2049..>2479)
                     /locus_tag="VFN38_06840"
     CDS             complement(2049..>2479)
                     /locus_tag="VFN38_06840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="pyruvate kinase alpha/beta domain-containing
                     protein"
                     /protein_id="HET9011515.1"
                     /translation="IVEIEKHPRIGGAEDREVRETAVSTEHAIAAAATSAVRSLAAPA
                     LIVFTKSGFSARVVASHRPGVPILVLTDQERTYRQLALVWGVIPCLVPHCDTYWDMVK
                     LALDAVRSRGLARPGDRVVVTAGVPFDVPGTTNLMKVETV"
BASE COUNT          336 a          896 c          916 g          331 t
ORIGIN      
        1 caggagcatc agcagctcgc ccacgtggaa gggatccacc ctctccagcg tcagcgtcat
       61 gttgggccgc ccgcgccgcg cgagcgcgcc ggcggtggcg cggcgctcga tgtcgagcag
      121 ctcgccgagc tggtgcccgc ccagatacgc gagctccggg atgtcggcgt ggagggccgg
      181 aatctcgacg tccgacgacc cctgcgtcac cccgatgaaa gtgaccgtct tgtcgggcgg
      241 tccctccatg aacagctgaa cctggctgtg ctggtcggtg gcgccgagcg cggcgagggg
      301 ggtcggcccc actcccgcgt cccccgtcgt gcgatgcttg ccgaggctct ccgcccacag
      361 ctgcacgaac caggcggcca tgtcgcgcag cgcatcgctg tacggcatca gcacctggac
      421 gtggcgcccg tgcgtcgtgt cagcgaggtg ctggagcgcg gcgaaggtgc cggcgatgtt
      481 cgccccgagc gtcgccgagg cgcaccgcgt ccgcatcgcc gccgcgccgg ccagcagcgc
      541 accggtgtcg attcccatca gggccgcggg gaggagaccg acgggagtga gcacgctgaa
      601 ccgcccgccc acgttcgacg ggatgtcgag cgccgcgatc ccctcggccc tcgcgatcgc
      661 gcgcagcgcc cccttctcgg ggtcggtgac gaacacgagc cgctccttcg ccgcggcgtc
      721 gcccagggcc gcggcgaggc gcccacgcac gacgaggtat tgcgccatcg tctcggccgt
      781 cccgcccgac ttcgacgtca cgatgaagag gctcttcccg aggtcgagcc gcgtgagcag
      841 cgcggcgatg ttggccggat ccacgttgtc gagcacgtgc aggcgcgggt ggcccccgcg
      901 cgccgcgtcg tcgagcaggt tccactgcgg cggacgcagc gccgtgcgca gggcgatcgg
      961 ccccagcgcg gagccgccga tcccgagcac gacgacgtcg gtgagggcgg cggcaccgga
     1021 ccgtgcgcgc gcacgcgcca cgtagtccag cgtctgccgg tgcagcgcgc cgtcgtcggg
     1081 caggtcgagg aatccgagcg taccgccggc atgcagcgcc gtgaccccgg catgcgccga
     1141 ggcgaagcgc gcgccggcgt cgcgccattc cgcctgggtg atgccgccgt cgatcggcgg
     1201 ggccatcatg ttggtgtagt cgagcgtgag cggcatgagg cggttagacg gtgatcgtca
     1261 ggccatcgaa cgccggcgca acgccggcgg ggagctcggc ctcgaggtcg gcgtggaagt
     1321 tgtcgtgcgt gaggtgggtc aggtacgtgc gctccgcgcc cacctcgccg gcgacgcgca
     1381 gcgcctcccc caggctcagg tgcgaggggt gcggctggcg gaacagcgcg ttcacgacga
     1441 gcacccgcgc cccgcgcagc agggccagcg cgtcggccgg caccgacttc gcatccgtga
     1501 cgtaggcgag cggcccgatg cggtatgcaa ataccgtgac agccccgtgc ggcaccggca
     1561 ccgccgtcac gtccacgtcg gcgatgcgca ccgtctcgcc gcccgccatg gggatggccc
     1621 gcccctgcgg cttcgaggta ccgggaaggg gacggatgtt gtcgtcgaag atgtaggcga
     1681 acttcctcgc cagctcgtcg agggtgtccg ccgcgccgta catcggcagg tgcacgtcgc
     1741 gccgcgcggt gatcgcgcgc aggtcgtcga tgccgtgggt gtgatcggcg tggccgtgcg
     1801 tgtacagcac cgcgtccacg cgggcgagct gggcgcgcac gagctgcagc cgcagctccg
     1861 gcggcgtgtc gatgagcagc accgcgccgg cgtcggtctc caccgccgcc cccacgcggc
     1921 tgcgctcgtc gcgcgggtcg ggcgagcggc acaccgcgca gccgcagccc agctgcggca
     1981 cgccgaagct cgtgcccgtg ccgaggaagg tgagcctcac gccgctcggc tggcgggcag
     2041 gcccgtcgtc ataccgtctc gaccttcatc aggttggtcg tgcccggcac gtcgaacggc
     2101 acgccggcgg tgaccacgac gcggtcgccg gggcgcgcca gcccgcgcga gcgcacggca
     2161 tcgagggcca gcttcaccat gtcccagtag gtgtcgcagt ggggcacgag acaggggatg
     2221 accccccaca ccagcgcgag ctggcggtag gtccgctcct ggtcggtgag cacgaggatg
     2281 gggacgcccg gccggtgcga cgccacgacc cgtgcggaga agccgctctt ggtgaacacg
     2341 atcagcgccg gcgcggccag gctccgcacc gccgacgtcg ccgccgccgc gatggcgtgc
     2401 tcggtggaca cggcggtctc gcgcacctcc cggtcttcgg cgccgccgat gcgcggatgc
     2461 ttctcgatct ccacgatga
//
LOCUS       DASSYW010000428         2164 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1700121, whole genome shotgun sequence.
ACCESSION   DASSYW010000428 DASSYW010000000
VERSION     DASSYW010000428.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2164)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2164)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2164
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1700121"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            163..867
                     /locus_tag="VFN38_06845"
     CDS             163..867
                     /locus_tag="VFN38_06845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011516.1"
                     /translation="MTPRLHLPALGRRDRRALLLGAWIVVPVLLATVVVRPVVATLLE
                     LRDSVERERMLLGRELRLVSDASRDRELLRITERALNDAAPRLFGGSEPVTASAELAR
                     YVRSQATASGLVLEQTETETVFDDVPPIGGTSGGGPSGTGADTATRPLRVSIRAHGGT
                     VAIVDFLEAMEDGPRLVRVERIGVSRGVTGGVPERGALTFTATITGLARSGFRVGGTA
                     GAAPMRAAPVREGGTQ"
     gene            864..1367
                     /locus_tag="VFN38_06850"
     CDS             864..1367
                     /locus_tag="VFN38_06850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011517.1"
                     /translation="MRRRVPDLLPLASMIALGGGTILFVAALWSALRLDPLPAAADDR
                     PNGELVLAGGARGMGTDSASSLVALASDPFSPDRRLPDEPSDESAARRDTVPVAPADS
                     VRLLGTVVRGSSGFAVCQLSGDTPRIVHLGERLGGLTLLSLGQGRAVFRAPNGTRLEL
                     SLSQPGT"
     gene            1369..>2164
                     /locus_tag="VFN38_06855"
     CDS             1369..>2164
                     /locus_tag="VFN38_06855"
                     /inference="COORDINATES: protein motif:HMM:NF015891.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="secretin N-terminal domain-containing protein"
                     /protein_id="HET9011518.1"
                     /translation="MTSTIRRLLPLALLAVLLPEGGALPAGAQQPVVPPGARATPQGV
                     LIDLQDTEVRSVITALAEAAGINVTFGDLPARRITLRMRQPVPVDSVRPLLRSIAEAN
                     GLRVTDSGGLLRFEGIAPPQPVAVAPQALPGAVQLYVYRLRHARAARLAATLQAIFGG
                     GAVSDVATTGPIPLSQRLRDQQIPSLRLDTLNRGRVEVMPVAPGLSGRVQSQVQIVPD
                     ENTNSLLVRASAADWEVVRQAIQVVDLRPLQALIEVLIAEVRRTRDF"
BASE COUNT          247 a          839 c          771 g          307 t
ORIGIN      
        1 gctcgaggga tcggcgacgc gcgccgcgct ggtgttcgac gccctggggc gcattcccgg
       61 cgtgcaggcc gtgcgtccgg agggagcgat ccgccaggac gtcacggccc gcggcgccgc
      121 gacggagcgc ttcgtgttgt cggcgcgact cggagggcag ccatgacacc gcgcctgcac
      181 ctcccggcgc ttggccggcg cgaccggcgc gcgctcctgc tcggagcctg gatcgtcgtg
      241 ccggtgctgc tcgccacggt cgtcgtccgg ccggtcgtcg cgaccctgct cgagcttcgc
      301 gactccgtgg agcgcgaacg catgctcctg gggcgcgagc tccgcctggt gtcggacgcc
      361 tctcgcgatc gggagctgct ccgcatcacg gagcgcgcgc tgaacgacgc ggcaccgcgc
      421 ctgttcggcg gatcggagcc cgtgaccgcc tccgcggagc ttgcccggta cgtccgctcc
      481 caggcgaccg cgagcggcct cgtgctggag cagaccgaga cggagacggt gttcgacgat
      541 gtgccgccga tcggcggcac gagcggcggc ggcccgtcgg gcaccggcgc cgacacggcg
      601 acccggccac ttcgcgtcag cattcgcgcg cacggcggaa cggtggccat cgtcgacttc
      661 ctggaggcga tggaagatgg tccccggctg gtgcgcgtcg agcggatcgg agtcagccgc
      721 ggcgtcacgg gcggcgttcc cgagcggggg gcgctcacct tcaccgccac catcaccggc
      781 ctcgcgcgca gcggcttccg cgtcgggggc accgccggcg ccgccccgat gcgtgctgcg
      841 cccgttcgcg aaggaggcac gcaatgagac gtcgcgtgcc cgacctgctt ccactcgcct
      901 ccatgatcgc gctcggcgga gggacgatcc tcttcgtcgc ggcactctgg agcgcgctgc
      961 gcctcgaccc gttgccggcg gctgccgacg accgcccgaa cggtgagctc gtcctcgccg
     1021 gcggcgcgcg cggcatgggc accgacagcg catcctccct cgtggcgctc gccagcgacc
     1081 cgttcagccc cgatcggcgg ctgcccgacg agccgtcgga cgagtcggcg gcgcgtcgtg
     1141 acaccgtgcc cgtcgcgccg gcggattcgg tgcgcctgct gggcaccgtc gtccgcggca
     1201 gcagcggctt tgcggtgtgc cagctctccg gcgacacgcc gcgcatcgtc cacctcggcg
     1261 agcgcctcgg cgggctcacc ctcctctcgc tcgggcaggg ccgcgccgtc ttccgcgccc
     1321 cgaacggcac gcggctcgag ctctcgctct cgcaaccggg gacctgacgt gacctccacc
     1381 attcgccgcc tgctcccgct cgcgctgctc gccgtgctgc tccccgaggg cggcgccctc
     1441 cctgccgggg cgcagcagcc cgtggtgccg ccgggcgcgc gcgccactcc gcagggagtg
     1501 ctcatcgacc tgcaggatac ggaggttcgc agcgtcatca ccgcgctcgc cgaagccgcg
     1561 gggatcaacg tcaccttcgg cgatctcccg gcacgacgga tcacgctccg gatgcggcag
     1621 ccggtgccgg tggacagcgt gcgccccctg ctgcgctcca tcgccgaagc caacggcctg
     1681 cgggtcaccg acagcggggg cctgcttcgc ttcgagggca tcgccccgcc gcagcccgtc
     1741 gccgtggccc cgcaggcact ccccggtgcc gttcagctgt acgtctaccg gctccgccac
     1801 gcgcgggccg cacgccttgc cgccaccttg caggcgatct tcggcggagg cgccgtgtcc
     1861 gacgtcgcca cgacgggtcc gatcccgctg tcgcagcggc tgcgggatca gcagatcccg
     1921 tcgctgcggc tcgacacgct caaccgcggc cgcgtcgagg tgatgccggt cgctcccggg
     1981 ctctccggcc gcgtgcagag ccaggtgcag atcgtgcccg acgagaacac gaactcgctg
     2041 ctcgtccgcg cgtcggccgc cgactgggag gtggtgcgcc aggccatcca ggtggtggac
     2101 ctgcgcccgc tgcaggcgct gatcgaggtg ctcatcgccg aggtgcggcg cacccgcgac
     2161 ttcg
//
LOCUS       DASSYW010000429         2279 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_790588, whole genome shotgun sequence.
ACCESSION   DASSYW010000429 DASSYW010000000
VERSION     DASSYW010000429.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2279)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2279)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2279
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_790588"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            24..932
                     /locus_tag="VFN38_06860"
     CDS             24..932
                     /locus_tag="VFN38_06860"
                     /inference="COORDINATES: protein motif:HMM:NF013324.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="slipin family protein"
                     /protein_id="HET9011519.1"
                     /translation="MLTVIPPSANAVVPSGTRVNFLSVLVTLGVTSVGVGALLLAGSI
                     PAVVGAAVLGVLLGTAPQVARQWERAVVLRLGRFDGLRGPGLFWRIPFVDSVTAWVDQ
                     RVITSPFAAEETLTSDTVPVNVDAVLFWMVHDAEKAALEVQNYPQAVSWAAQTALRDI
                     IGRTSLADLLHGRERIESELQELIDNRCMPWGVAVQAVEMRDIIIPANLQDAMSREAQ
                     ATREKRARIILGEAEVEIATLFEEASHVYQKNPTALQLRAMNILFEGIKQKGALMIVP
                     SNAVQEMGLGGMIGAAAMQQQGIKAP"
     gene            complement(954..>2279)
                     /locus_tag="VFN38_06865"
     CDS             complement(954..>2279)
                     /locus_tag="VFN38_06865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011520.1"
                     /translation="IAIAESTPDTGARRATLERAYSDARRIALTDVDRQRSRDAMLAA
                     VALRLGRADDVRALFARLSDIMDLRLVVATAAGRTDGLPMVRELAPRVVRAGRAIRDS
                     TAREVYLVTLWPMLKESGGRPFADSLLPEATWRAEHPRDLRAMMDSAKRVDTSASVAA
                     MRAIEAGDFAEARRQAERIPLNDRLARRAGLLAEMAWGSYMGHGDTARTYLREARAAL
                     LAAPRDSAVFDERALRIASHQFWLGDNDEGVRTLDLVRNPDEASYVVSQWGTSTMSGL
                     TARKLRAYADRVRSRKMRDLVLLHAVTPYLVARSASDSDAAWGLALADSIGTPVFRRE
                     AQRAVANHALERRDSTDARRRIVALLRDPLADAALRDGDLRRSLVADLVRAGGWRDAL
                     DWARLPSAPAVRARRLLGVAAILQQQLDQRSGNHMLVISNGPDWCRDEF"
BASE COUNT          334 a          785 c          833 g          327 t
ORIGIN      
        1 gtgcgacttc cgggagagga gccatgctca ccgtcatccc tccgtccgcc aacgccgtgg
       61 ttccttccgg cacgcgcgtc aacttcctct ccgtgctcgt gacgctcggc gtcacgtcgg
      121 tcggcgtcgg agcgctgctg ctcgccggca gcatcccggc cgtcgtcggt gcggcggtgc
      181 tcggggtgct gctcggcacg gcgccccagg tggcgcggca gtgggagcgc gccgtcgtgc
      241 tgcgactcgg ccgcttcgac ggactgcgcg gtcccgggct gttctggcgg atccccttcg
      301 tcgacagcgt cacggcgtgg gtggaccagc gcgtcatcac gagcccgttc gcggcggagg
      361 agacgctgac gtcggacacc gtgccggtga acgtcgacgc cgtgctcttc tggatggtgc
      421 acgacgccga gaaggccgcg ctcgaggtgc agaactatcc gcaggcggtg agctgggccg
      481 cgcagaccgc gctgcgcgac atcatcggcc gcacctcgct cgcggatctg ctgcacgggc
      541 gggagcggat cgagagcgag ctccaggagc tgatcgacaa ccgctgcatg ccgtggggtg
      601 tggcggtgca ggcggtggag atgcgcgaca tcatcatccc ggcgaacctc caggacgcga
      661 tgtcacgcga ggcgcaggcg acgcgcgaga agcgggcgcg catcatcctc ggcgaagccg
      721 aggtggagat cgccacgctg ttcgaggagg cgtcgcacgt ctaccagaag aaccccaccg
      781 cgctccagct ccgcgcgatg aacatcctct tcgaggggat caagcagaag ggcgcgctga
      841 tgatcgtgcc gagcaacgcg gtgcaggaga tggggctcgg cgggatgatc ggcgcggcgg
      901 cgatgcagca gcaggggatc aaggcacctt aggcggtgcg gctcgtccct gactcagaat
      961 tcatcgcggc accagtccgg accgttcgag atgacgagca tgtggttgcc gctgcgctgg
     1021 tcgagctgct gttgcaggat cgcggcgacg ccgagcaggc gccgcgcacg cacggcgggc
     1081 gcggacggaa ggcgcgccca gtcgagcgcg tcacgccagc caccggcccg cacgagatcg
     1141 gcgacgagac tgcgacggag atccccgtcg cggagcgccg cgtcggccaa cggatcgcgc
     1201 aggagtgcca cgatgcggcg ccgtgcgtcc gtcgagtccc tccgctccag ggcgtgattg
     1261 gcgacggcac gctgcgcttc ccgacgaaag accggcgtgc cgatcgagtc ggcgagggcg
     1321 agcccccacg cggcatcgga gtcgctcgct gatcgtgcca ccaggtaggg agtcacggcg
     1381 tgcaggagga cgaggtcgcg catcttccgg ctccgcaccc ggtcggcgta cgcgcgcagc
     1441 tttcgcgcgg tcagcccgga catggtggat gtgccccact ggctgacgac gtacgacgcc
     1501 tcgtccggat tgcgcaccag gtcgagcgtc cgcacccctt cgtcgttgtc gccgagccag
     1561 aactggtggc tggcgatgcg cagtgcgcgt tcgtcgaata ccgcggaatc gcggggtgcg
     1621 gcgagcagcg cggcgcgcgc ttcacgcagg tacgtgcgcg ccgtgtcgcc atgtcccatg
     1681 tacgagcccc aggccatctc cgcgagcagc ccggcgcgcc tggcgaggcg atcgttcaac
     1741 gggatgcgct cggcctgccg ccgcgcctcg gcaaagtcgc ctgcctcgat cgcccgcatc
     1801 gccgccacgg aggccgaggt gtcgaccctc ttcgcgctgt ccatcatcgc gcgcaggtcg
     1861 cgcggatgct cggcacgcca cgtggcttcc gggagcagcg aatccgcgaa gggtcggcca
     1921 cccgactcct tcagcatcgg ccagagcgtc accaggtaca cctcgcgcgc ggtgctgtcg
     1981 cgaatggcgc ggccggcccg cacgacgcgt ggcgccagct cccgcaccat cggcaagcca
     2041 tccgtccggc cggcggccgt cgccacgacg agccggaggt ccatgatgtc cgagagccgc
     2101 gcgaacaggg cgcgaacgtc gtccgcccgg ccgagtcgca gtgcgacggc ggcgagcatc
     2161 gcgtctcgcg agcgttggcg gtcgacgtcg gtcaaggcga tccggcgcgc gtccgagtat
     2221 gcgcgctcga gggtcgcacg ccgggcgccg gtgtctggcg tcgactcggc gatggcgat
//
LOCUS       DASSYW010000430         2398 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_414757, whole genome shotgun sequence.
ACCESSION   DASSYW010000430 DASSYW010000000
VERSION     DASSYW010000430.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2398)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2398)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2398
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_414757"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..441
                     /locus_tag="VFN38_06870"
     CDS             <1..441
                     /locus_tag="VFN38_06870"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HET9011521.1"
                     /translation="GAFFVFFRYAGLGLAMRATAIDQEAAMARGISVRRVFAASWAIS
                     AGVAALAGITLAAGPARLNPGIGYIALAAFPAMILGGLDSPAGAVLGGMIIGITQVLT
                     QGYQPEYAAWLGNNFHAVMPYLVMVLILMVRPYGLFGTKEVTRV"
     gene            441..1544
                     /locus_tag="VFN38_06875"
     CDS             441..1544
                     /locus_tag="VFN38_06875"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HET9011522.1"
                     /translation="MHSSANAAMSLDYGDEIRLFRLTGRKVTIAVLLVAGLVLPFRMT
                     DFQSSVMIYAGIAAVGAMGLNLLTGYTGQISLGQAAFLGIGAYTAAYVGGQLGWPLAL
                     WLPTAALFGAAVGAVIGPFALRLRGNYLAIVTLGLVFVAQHVFESWTSVTGGLNGTTV
                     DAPVAVGPVDFAQLHLFGRELSRDQGFFYLVWILVAVVALTSKNIARSRAGRALQAVR
                     DRDVAAEAVGVRLARYKVLAFVLSSSLAAVGGGLLGAYQQFVSPGDFGLLVSITYVAI
                     VVIGGAGLITGPILGALFVTVVPRVIEELSARDWIPFVTTDATGNGLISVFSLNQAIF
                     GVLIIVFLVLEPRGLTAIWLRIRAYFKAWPFSY"
     gene            1563..>2398
                     /locus_tag="VFN38_06880"
     CDS             1563..>2398
                     /locus_tag="VFN38_06880"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HET9011523.1"
                     /translation="MKTSNVRKGPLLVVLFVVLALVAAACGGGDDDSATATTSAGQTG
                     KTLSAVDGFDGTTINLGVLVPLSGLPAIIGKPLVAGQQTYWDYLNKEKGGVAGKYPVK
                     LLTEDTQYDTSLTVQKYNKLKNDVVLFSQVMGTPHNLALLPLLKKDDVVVSPASQDAL
                     WVREQQLLPIIEPYQIDVINGMDYYLNEGGGEGKKVGAIIQNDVYGEAGLEGLKYAAD
                     NMGFEIVASPRFKLGDTDFTAQINELRSKGAEMVWAVALPSEFTGILGTAARLGYEPQ
                     WIA"
BASE COUNT          351 a          843 c          794 g          410 t
ORIGIN      
        1 ggcgccttct tcgtgttctt ccgctacgca ggtctcgggc tcgccatgcg cgccaccgcg
       61 atcgaccagg aggcggcgat ggcgcgcggc atcagcgtcc gccgcgtctt cgccgcgtcg
      121 tgggcgatct cggcgggtgt cgccgcgctc gccggcatca cgttggcggc ggggccggcg
      181 cgactgaacc ccggcatcgg ctacatcgcg ctggccgcct tcccggcgat gatcctcggt
      241 ggactcgact caccggcggg cgcggtgctc ggcgggatga tcatcggcat cacgcaggtg
      301 ctgacccagg gctaccagcc ggagtacgcc gcgtggctcg gcaacaactt ccacgccgtc
      361 atgccctacc tggtcatggt cctcatcctc atggttcgcc cgtacggcct cttcggcacc
      421 aaggaggtga cccgggtctg atgcacagct ccgcgaacgc cgccatgtcc ctggactacg
      481 gcgacgagat ccgcctcttc cgcctgacgg gccgaaaggt gaccatcgcc gtgctgctcg
      541 tcgccggcct cgtgctcccg ttccgcatga cggacttcca gagctcggtg atgatctatg
      601 cgggcatcgc cgcagtcggc gccatgggcc tcaacctcct cacgggctac accgggcaga
      661 tctcgctcgg ccaagccgcc ttcctcggca tcggcgcgta caccgcggcg tacgtcggcg
      721 gccagctggg atggccgctg gcgctgtggc tgccgacggc cgcgctgttc ggcgccgccg
      781 tgggtgccgt gatcggcccg ttcgcgctcc gtctgcgcgg caactacctc gccatcgtga
      841 cgttggggct cgtgttcgtc gcccagcacg tgttcgagag ctggacctcc gtcaccggcg
      901 ggttgaacgg caccaccgtg gatgcgcccg tcgccgtggg cccggtcgac ttcgcgcagc
      961 tccacctgtt cggccgcgag ctcagccgcg atcagggctt cttctacctc gtgtggatcc
     1021 tcgtcgccgt cgtcgcgctg acgtcgaaga acatcgcccg cagccgcgcc gggcgcgcgc
     1081 tccaggccgt gcgtgaccgc gacgtcgccg ccgaggccgt cggcgtccgt cttgctcggt
     1141 acaaggtgct cgccttcgtg ctctcgagct ccctcgctgc ggtcggcggc gggctgctcg
     1201 gcgcctatca gcagttcgtg agcccgggtg acttcggact cctcgtctcg atcacctacg
     1261 tcgcgatcgt cgtcatcggc ggcgccggcc tgatcacggg gccgatcctc ggtgcgctgt
     1321 tcgtcaccgt cgtgccgcgc gtcatcgagg agctcagcgc gcgcgactgg atcccgttcg
     1381 tgacgaccga tgccaccggc aacggcctga tcagcgtctt ctcgctgaac caggcgatct
     1441 tcggggtgct gatcatcgtc ttcctcgtgc tcgagccgcg cggcctcacc gcgatctggc
     1501 ttcgcatccg cgcctacttc aaggcgtggc cgttctcgta ctgacaagga aagggacccg
     1561 acatgaagac aagcaacgtg cgcaagggtc cgttgctcgt cgtgctcttc gtggtgctcg
     1621 ccctcgtggc cgcggcgtgc ggcggcggcg acgacgactc cgcgaccgcg acgacgagcg
     1681 ccggacagac cggcaagacg ctcagcgccg tcgacggctt cgacggcacg acgatcaacc
     1741 tcggcgtgct cgtgccgttg agcggcctgc ccgccatcat cggcaagccg ctcgtggcgg
     1801 gccagcagac gtactgggac tacctcaaca aggagaaggg tggcgtcgcc ggcaagtacc
     1861 cggtgaagct cctgacggag gacacgcagt acgacaccag cctgacggtg cagaagtaca
     1921 acaagctgaa gaacgacgtc gtgctcttct cgcaggtgat gggcacgcct cacaacctgg
     1981 cgctgctccc cttgctgaag aaggacgacg tggtcgtgtc gcccgcgtcg caggacgcgc
     2041 tgtgggtgcg cgagcagcag ctgctcccga tcatcgagcc ctaccagatc gacgtgatca
     2101 acggcatgga ctactacctc aacgagggcg gcggtgaggg caagaaggtc ggcgccatca
     2161 tccagaacga cgtgtacggc gaggccggac tcgagggact gaagtacgcc gccgacaaca
     2221 tgggcttcga gatcgtcgcg tcgccccgct tcaagctcgg cgacacggac ttcacggccc
     2281 agatcaacga gctgcgcagc aagggcgcgg agatggtgtg ggcggtcgcc ctgccgtcgg
     2341 agttcaccgg catcctcggc acggccgcac gactcggcta cgagccgcag tggatcgc
//
LOCUS       DASSYW010000431         2919 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_483185, whole genome shotgun sequence.
ACCESSION   DASSYW010000431 DASSYW010000000
VERSION     DASSYW010000431.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2919)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2919)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2919
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_483185"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1423
                     /locus_tag="VFN38_06885"
     CDS             <1..1423
                     /locus_tag="VFN38_06885"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HET9011524.1"
                     /translation="YFPGAVVKGNVLIGGDSALYPRDNQFPVSLAAARAMAWPAAGAD
                     VEALNRTALRVASPRLRLGEAPRPGAASTVPAGEPARSDPGTGVVVVFWGALFLIGYV
                     YAGYPFVAWLRARLWPHPDCRASIEPTVTIVVVAHNEETCIEARIENLLALDYPADRR
                     QILIGSDGSTDDTVARAKRLAQDGVWVVAFKHWRGKAAVLNQLVRRARGEIVLFADAR
                     QTFDPQVLRRLVACFADERVGAVSGELMLTDSTGTPMGRGASFYWRYEKFIRVHEGKA
                     GSTVGATGAIYAIRRALFRSIPNDTILDDVLIPMRIVQQGYSVQFAQEARAYQAVSRT
                     TQQEYVRKVRTIAGQFQLFAREWWLLNPFQNSLWFETISHKGMRLLLPVFHLALFAAN
                     LELSRVPFYGAVFALQTLFYAAAIAGHERRFAARRPIFISVPYAMCCMLWATVAAFHR
                     FLMNGQQATWEQAPVTAARASRT"
     gene            complement(1395..>2919)
                     /locus_tag="VFN38_06890"
     CDS             complement(1395..>2919)
                     /locus_tag="VFN38_06890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011525.1"
                     /translation="GQTANLGPLFAADHPLSWSTGEGWYFSATRPNALYVLDGARLQR
                     YDVSSHTLETAFDASSQFGADKYLWQAHSSADDRVHSATLRQTSTYEMLGCVVYSEST
                     GRVSWFPKKGDFDECQIDRSGRWVVIKENVDGLNGEDNRVVDLQTGTEQVLTDPNGAS
                     GHSDMGFGYLVAEDNFNRLPGAVRRWNLSLDMRGGQPATVTGQGDLVYQLSSWSTGVG
                     HIAFGNAQSGRPIEQQAACASNASRERLPRVNEIVCFKLDGSLQTLVIAPNLTDLNAA
                     GGGADDYSKLPKGNIDVTGEYFIWTANAASGRLDAFLVRIPSFSGSSTSTAPPPASSP
                     TPAPAPTPTPPPATTPSPTAEAVTWTSLVNVTATTGELRKTGGCAGCPDAGAASTQTI
                     ASGDGELTFVAGDTQALRAIGLSTGNTGTGPEEIVFGLRVQNGRVEVRESGAYRAERA
                     LAAGDVLKVTLRAGTVSYLLNGTAFYTSAVTPAYPLLVDTSLFDMGGTFTSVTLARP"
BASE COUNT          423 a          997 c         1012 g          487 t
ORIGIN      
        1 ctacttcccg ggcgccgtcg tgaagggcaa cgtcctgatc ggcggcgatt cggcgctata
       61 cccacgcgac aaccagttcc ccgtgtcgct cgccgcggca cgcgcgatgg cctggccggc
      121 cgccggcgcc gacgtcgagg ccctgaatcg taccgctctg cgcgtggcga gcccgcgact
      181 ccggctcggc gaggccccgc gccccggcgc cgcgagcacc gtgccggccg gggagccggc
      241 gcgttcggac ccggggaccg gcgtcgtcgt cgtgttctgg ggcgcgctct tcctcatcgg
      301 ctacgtctat gccggatatc cgttcgtcgc ctggctgcgg gcgcggctct ggccgcaccc
      361 cgactgtcgc gcgtcgatcg agccgacggt cacgattgtc gtcgtggcgc acaacgaaga
      421 gacgtgcatc gaggcgcgga tcgagaactt gctggcgctg gactatccgg ccgaccggcg
      481 tcagatcctc atcgggtccg acggctcgac cgacgacacc gtggccaggg cgaagcgcct
      541 ggcgcaggac ggcgtgtggg tcgtcgcctt caagcactgg cgcggcaagg cggcggtgct
      601 gaatcagctg gtgcgccgcg cgcggggtga aatcgtgctc ttcgccgacg cgcgccagac
      661 gttcgacccg caggtgctgc gacgcctcgt cgcgtgcttt gccgacgaac gcgtgggcgc
      721 ggtgagcggc gagctgatgc tcaccgacag caccggcacg ccgatgggtc gcggcgcctc
      781 gttctattgg cgctacgaga agttcatccg agtgcacgaa gggaaggccg gatcgaccgt
      841 cggtgccacc ggcgccatct acgcgatccg gcgggcgctc ttccgctcga tccccaacga
      901 cacgatcctc gacgacgtgc tcatcccgat gcgcatcgtg cagcagggct actcggtgca
      961 gttcgcacag gaggcgcggg cgtatcaggc ggtatcgcgc acgacgcagc aggagtacgt
     1021 gcggaaggtg cggacgatcg ccggccagtt tcaactcttc gcgcgcgagt ggtggctgct
     1081 gaacccgttc cagaactcgc tctggttcga gaccatctcg cacaagggga tgcgcctgct
     1141 gctgccggtc ttccacttgg cgctcttcgc cgccaacctc gagctgtcac gggtgccgtt
     1201 ctacggcgcc gtcttcgcgc tgcagacgct gttctacgcc gccgccattg cggggcacga
     1261 gcggcgcttc gcggcgcgcc gcccgatctt catcagcgtg ccctacgcaa tgtgctgcat
     1321 gctgtgggcg acggtcgccg cgttccaccg cttcctcatg aacgggcagc aggcgacgtg
     1381 ggagcaggcg cccgttacgg ccgcgcgagc gtcacggacg taaacgtgcc gcccatgtcg
     1441 aacagcgacg tatccaccag cagcggatac gccggcgtga cggcgctcgt gtagaacgcc
     1501 gttccgttca gcaggtaact gaccgttccc gcccgcaggg tgaccttcag cacgtcaccc
     1561 gccgcgaggg cccgctccgc cctgtaggcg ccgctctcgc ggacctccac ccgcccgttc
     1621 tgcacccgca atccgaagac gatctcttcc ggcccggttc cggtgttgcc ggtactgagg
     1681 ccgatggcgc ggagcgcctg cgtgtcaccc gcgacgaagg tcagttcacc gtcgcccgag
     1741 gcgatcgtct gcgtcgaggc ggcacccgcg tcgggacagc ccgcgcagcc gccggtcttg
     1801 cgcagttcac cggtggtggc cgtgacgttg acgagcgacg tccaggtcac cgcctccgcg
     1861 gtgggcgaag gtgtcgtggc cgggggcggt gttggagtgg gtgccggcgc tggagttgga
     1921 ctcgaggcgg gaggcggagc cgtggacgtg gacgaaccgg agaacgacgg gatgcggacc
     1981 aggaacgcgt cgaggcggcc cgacgccgca ttggcggtcc agatgaaata ctcgccggtg
     2041 acgtcgatgt tgcccttcgg cagcttcgag tagtcgtccg cgccgccacc cgcggcgttg
     2101 agatccgtca ggttcggcgc gatcaccagc gtctgcagcg agccatccag cttgaagcag
     2161 acgatctcgt tgacgcgcgg cagccgttcg cggctggcgt tgctggcgca cgccgcctgc
     2221 tgctcgatgg gccgccccga ctgcgcgttg ccgaaggcga tgtgtccgac gccggtggac
     2281 cacgacgaga gctggtagac cagatcgccc tgacccgtga ccgtggcggg ttgtccgccg
     2341 cgcatgtcga gcgacaggtt ccagcggcgc accgcgcccg gcaaccgatt gaagttgtct
     2401 tcggccacca ggtagccgaa gcccatgtcg gagtgaccgc tggcgccatt gggatccgtc
     2461 aacacttgct cggttcccgt ctggagatcg acgacgcggt tgtcttcgcc gttgaggccg
     2521 tccacgttct ccttgatcac gacccagcgg ccgctgcgat cgatctggca ctcgtcgaag
     2581 tcgcccttct tggggaacca cgagacgcgc cccgtgctct cgctgtagac gacgcatccg
     2641 agcatctcgt aggtggacgt ctgccggagc gtggcggagt gcacgcgatc atcggcgctc
     2701 gaatgcgcct gccacaggta cttgtcggcg ccgaactggc tgctcgcgtc gaacgccgtt
     2761 tccagcgtgt ggctcgagac gtcgtagcgc tggagccgcg ccccgtcgag gacgtagagc
     2821 gcgttcggcc gggtggcgct gaaataccac ccctcgccgg tactccagct cagcgggtga
     2881 tcggccgcga aaagaggccc gagattggcg gtctggccg
//
LOCUS       DASSYW010000432         3151 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_978067, whole genome shotgun sequence.
ACCESSION   DASSYW010000432 DASSYW010000000
VERSION     DASSYW010000432.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3151)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3151)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3151
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_978067"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            217..>3151
                     /locus_tag="VFN38_06895"
     CDS             217..>3151
                     /locus_tag="VFN38_06895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011526.1"
                     /translation="MIASRRLLAAAMLAAAPALSAQQLDSTTFAAMRWRMIGPHRGGR
                     TVGAVGVPGQPNVFYIGVNNGGVWKSTDYGRVWRPIFDGQPTGSVGAIAVAPSDPNVL
                     YVGSGEGLQRPDLSTGDGIYKSTDAGAHWTHLGLRDGQQIPAVIVDPRNPDRVFAAVL
                     GHPYGPNAERGIFRSLDGGASWTKVLYRDENTGAFDVAFDPADANTVYAVLWPGRQAP
                     WEIGGSFQLAGSGLFKSSDGGTTWRELTRGLPSQADGLGRIGLATSASRAARLYAIVD
                     APKLGGLYRSDDAGESWARVNTDNRLWGRGSDFAEVRVDPKNPDVLYVANVVTWKSTD
                     GGRTFTAFRGAPGGDDYHRVWINPDDPRVILLASDQGAIVTVNGGDTWSSWYNQPTAQ
                     FYHVTADNAFPYRLCGGQQESGSACVASRGDDGQITFRDWHPAGLEEYGYAAPDPLDP
                     DIVYGGKVTRWDRRTGDVQQVGPKPLRAADYRVVRTQPIVFSGADPRALYFASNVLWR
                     TRDGGRHWAQISPDLTRPSSAAPANLGAFGAVDPEKGKHRGVIYTIAPSYRDAATVWV
                     GTDDGLIHVTRDGGAHWRDVTPPALRDRPWAKISLMDASHFDAGTAYAAVNTFRLDDL
                     RPHIFRTHDGGASWTEIVSGLPNGDIVNVVREDPARRGLLYAGTERAVYFSLDDGDHW
                     TSLRLNMPATSIRDLVIKDDDIAVATHGRSFWILDDVTPLRTVHPATLSNDVALFAPQ
                     RATRVRWNRNTDTPIPQEEPAGDNPPDGAILNYWLRSSTGPVTLDILDASGALVRRFS
                     SADSVESPVPGRNIPDYWIRPPQRLSASAGMHRFVWDLRYLAPAVQRFEYPIAAIYRN
                     TPREPRGPWALPGTYTVRLTANGRTVSQPLVVRMDPRVKTPAAGLARQFALASELAAA
                     IGRSASAGRAAAAAAGTTPGAGRTPAADSLSRITGELAQLYGVVEGSDAAPTPQTEAA
                     AADRLR"
BASE COUNT          475 a         1180 c         1036 g          460 t
ORIGIN      
        1 aagctgcgcc agacgacctc gacgtcgccg gcatgctcga actgccggag cgcgcgctcg
       61 aaacggcgct tgccgacgta acaccacgga caggcgatgt ccgaccagat ctcgactttc
      121 atgggcgacg agcggggaag atgatcgacg gcgatgttga cgaatcgcga gcatgcagga
      181 atgattcccg actcgcctcc tgcaccggag tcattcgtga tcgcgtcacg tcgcctgctc
      241 gccgccgcca tgctcgcggc tgcacccgcc ctctccgcgc agcagctcga ttccaccacc
      301 ttcgccgcca tgcgctggcg gatgatcggg ccgcatcgcg gtggacgtac cgtcggcgcc
      361 gtgggcgtgc ccggtcagcc caacgtcttc tacatcggcg tcaacaacgg cggcgtctgg
      421 aagagcaccg actacggccg cgtctggcgc cccatcttcg acggccagcc caccggctcc
      481 gttggcgcca tcgccgtcgc gccctcggat ccgaacgtgc tctacgtcgg cagcggcgaa
      541 gggctccagc gccccgacct ctccaccggg gacggcatct acaagtccac cgacgccggc
      601 gcccactgga cccacctcgg cctgcgcgac ggtcagcaga tccccgccgt catcgtcgat
      661 ccgcgcaatc ccgaccgcgt cttcgccgcg gtgctcggac atccgtatgg gccgaatgcc
      721 gaacgcggga tcttccgctc gctcgacggc ggcgcgagct ggacgaaggt gctgtacagg
      781 gacgagaaca ccggcgcctt cgacgtcgcc ttcgatcccg ccgacgcgaa caccgtgtac
      841 gcggtgctct ggccgggacg tcaggcaccg tgggagatcg gcggctcctt ccagctcgcc
      901 ggcagcggcc tcttcaagtc gagcgacggt ggcaccacct ggcgcgagct cacccgcggt
      961 ctcccgtcgc aggccgatgg acttggccgc atcgggctcg cgacctcggc gagtcgcgcc
     1021 gcgcgtctct acgcaatcgt ggacgcgccg aagctcgggg gcctgtatcg gtcggacgat
     1081 gcgggcgaga gctgggcgcg cgtcaatacc gacaaccggc tgtgggggcg cggatcggac
     1141 ttcgccgagg tgcgcgtcga cccgaagaat ccggacgtcc tctacgtcgc gaacgtcgtc
     1201 acgtggaagt ccaccgacgg cggccgaacc ttcaccgcct ttcgcggcgc gcccggcggc
     1261 gacgactatc accgggtctg gatcaacccc gacgatccgc gcgtgatcct gctcgcgtcc
     1321 gatcagggcg cgatcgtcac cgtgaacggc ggtgacacct ggagctcgtg gtacaaccag
     1381 cccaccgcgc agttctatca cgtcaccgcc gacaacgcct ttccgtatcg gttgtgcggt
     1441 ggccagcagg agagcggctc cgcctgcgtg gcgagccgcg gcgacgacgg gcagatcacc
     1501 ttccgcgact ggcatcccgc cggcctcgag gagtacggct acgcggcccc cgatcccctc
     1561 gaccccgaca tcgtgtacgg cggcaaggtc acgcgatggg accgccgcac cggcgacgtc
     1621 cagcaggtcg gaccgaagcc gcttcgcgct gccgactatc gcgtcgtgcg cacgcagccg
     1681 atcgtcttct ccggcgctga tccaagagcg ctgtacttcg cgtcgaacgt gctgtggagg
     1741 acgcgcgacg ggggacggca ctgggcgcag atcagtcccg atctcacccg tccgtcctcg
     1801 gccgctcccg ccaacctcgg cgccttcggc gcggtggatc cggagaaggg caagcatcgc
     1861 ggcgtgatct acacgatcgc accctcgtat cgcgatgccg ccaccgtgtg ggtcggcacg
     1921 gacgacgggc tcattcacgt gacgcgcgac ggcggcgcgc actggcgcga cgtcacgccg
     1981 cccgcgctcc gcgatcgtcc gtgggcgaag atctcgctga tggacgcctc ccacttcgac
     2041 gccggcaccg cgtacgccgc ggtgaacacc ttccgactcg atgacctgcg cccgcacatc
     2101 ttccgcaccc atgacggcgg cgcgagctgg acggagatcg tgtccgggct cccgaacggc
     2161 gacatcgtga acgtggtgcg ggaggatcca gcgcgccgtg ggctgctcta cgccggcacc
     2221 gagcgcgcag tctatttctc gctggacgac ggcgaccact ggacgtcgct ccggctcaac
     2281 atgcccgcga cgtccatccg cgatctcgtg atcaaggacg acgacatcgc cgtggccacg
     2341 catgggcgct cgttctggat cctcgacgac gtcacgccgc tgcgcaccgt gcatccggcg
     2401 acgctctcga acgacgtcgc gctcttcgcg ccgcagcgcg ccacccgcgt gcgctggaac
     2461 cgcaacaccg atacgccgat cccgcaggag gagccggcgg gcgacaatcc gcccgacggc
     2521 gccatcctga actactggct gcgctccagc accgggcccg tcacgctcga catcctcgac
     2581 gcgtcgggtg cgctggtccg ccggttcagc agcgccgact ccgtggagtc gccggtcccg
     2641 ggccgcaaca tccccgacta ctggatccgt ccaccgcagc gtctctcggc gagtgccggc
     2701 atgcaccgct tcgtgtggga cctgcgctac ctggctccgg cggtccagcg cttcgagtat
     2761 cccatcgccg cgatctaccg gaacacgccg cgcgagccgc gcggcccatg ggccctgccg
     2821 ggcacctaca ccgtgcggct cacggcgaac ggtcgcaccg tgtcgcagcc gctcgtcgtg
     2881 cgcatggatc ctcgagtgaa gacgcccgcc gccgggctcg cgaggcagtt cgcgctggcg
     2941 tcggagctgg cggccgcgat cggtcgttcg gcgagcgctg gtcgcgccgc ggccgccgcc
     3001 gcgggcacca cgcccggcgc ggggcggacg ccggccgcgg acagcctcag ccgaatcacc
     3061 ggagagctcg cccagctcta cggcgtggtc gagggctccg atgcggcgcc cacgccgcag
     3121 acggaagccg cggcagccga tcgcctgcgc g
//
LOCUS       DASSYW010000433         6053 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_846178, whole genome shotgun sequence.
ACCESSION   DASSYW010000433 DASSYW010000000
VERSION     DASSYW010000433.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 6053)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6053)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6053
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_846178"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1660)
                     /gene="nuoL"
                     /locus_tag="VFN38_06900"
     CDS             complement(<1..1660)
                     /gene="nuoL"
                     /locus_tag="VFN38_06900"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF005141.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HET9011527.1"
                     /translation="MLLQHAADAMQAGGHPLSGTAAEYVWLLPLLPLLGFLLNGLLSL
                     ASAYRAGPGDPGAGHDAAHGHDAAPAHGAGAGAHGDDHHPVVRHRFATLTSLIGPGVL
                     ALSFLLAVAIFAALRGAGGGEMHAPFVQRYFSWMPVGDLQIDAAFQLDQLSKVMVLII
                     TGVGTLIHIFSVGYMQDDPGYPRFFAYLNLFVFFMLVLVLGANYPVLFVGWEGVGLCS
                     YLLIGFWFSEKANADAGKKAFIVNRVGDFGLLIAMFMLFANLGTLDFVGIAAAAPGQL
                     VFGGALVTAICLFMFLGCAGKSAQIPLYVWLPDAMAGPTPVSALIHAATMVTAGVYLI
                     ARSNFLFALAPAAGLTVVLIGALTAIFAASIGLKQWDIKKVLAYSTVSQLGYMFIGVG
                     SGAYVAGVFHLMTHAFFKALLFLGSGSVIFAMHRAYHHTGNHDDAQDMRNMGGLKKYM
                     PTTWLLMWAATLAIAGIPPFSGFFSKDEILGSVFLRAHEHSTLADARWLGIPGSVVLY
                     ACYVMGVAAAFMTAVYMTRMMLYTFHGPNRTGDRERDHLHEAPWV"
     gene            complement(1660..1953)
                     /gene="nuoK"
                     /locus_tag="VFN38_06905"
     CDS             complement(1660..1953)
                     /gene="nuoK"
                     /locus_tag="VFN38_06905"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HET9011528.1"
                     /translation="MLAESLFFSAVLFVIGVVGVLTRRNAIIVFMCVELMLNAVNLTF
                     VAFAQVYGVAGQVFVFFVMTVAAAEAAVGLAIIIALFRHRQTVNLSNINLLKG"
     gene            complement(1943..2500)
                     /locus_tag="VFN38_06910"
     CDS             complement(1943..2500)
                     /locus_tag="VFN38_06910"
                     /inference="COORDINATES: protein motif:HMM:NF012709.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HET9011529.1"
                     /translation="MTHNALPLFYVFHFYLFGIIAIVSAIAFVTRKSPVSAALWLVTT
                     MFCLAAMYVLLDAQFIGAMQVLVYAGAIMVVFLFVIMLLNLGHPSELADARGLWWKLA
                     AGLLGLALLAQVFALTRARLPEALTLPEGALASEFARSGAIAPLAGPLFNEYLLAFEL
                     TSVLLLAAVVGAVVLGKRKERSRAR"
     gene            complement(2500..2997)
                     /locus_tag="VFN38_06915"
     CDS             complement(2500..2997)
                     /locus_tag="VFN38_06915"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit I"
                     /protein_id="HET9011530.1"
                     /translation="MSIGVKVVQRPTEQTSYVRATLTGMAHTLKHMLNPEKVTTQYPE
                     QKESISKRWRGTHRMLTTEDGKAKCVACGLCPTVCPANCIKLVPGEDEKGNRYPLLFE
                     IDEFRCIFCGYCQEVCPEEAIHVGRHYENAEYSREGFVYDLERLMAQTHPVAELWDPM
                     DPKGE"
     gene            complement(2997..4280)
                     /gene="nuoH"
                     /locus_tag="VFN38_06920"
     CDS             complement(2997..4280)
                     /gene="nuoH"
                     /locus_tag="VFN38_06920"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoH"
                     /protein_id="HET9011531.1"
                     /translation="MTPAAALLQIAGPTTEPGFGFWIAATVVKLIAIFTLYMLGAALL
                     TLAERKISAWMQDRHGPNRVGKGWLQPIADGVKNFVKEETYPDAANLPLFILAPVISF
                     IPAMITWAVIPFGAPWGSRWGLMEMVLAPLPIGFLFILAISSLGVYGIVLAGWSSNNK
                     YALLGSIRSSAQMVSYEISMGMATIPVLLLAGNVSLSRIVNQQAFETWNVINLTVAFF
                     IFLVAAFAETNRLPFDLPEAESELITGYHTEYSAMKFSLFFIAEYCNMITASALMATL
                     FFGGWDIPFTLWDNLAPHTGLKTLLTMGAFATKTLFFLFLFMWIRWTLPRFRYDQLMS
                     LGWKFMLPLALAYIVVIAGLIVLLQYLGFAQGSWPFHLGLAMLNIVAVIVLFMILDRG
                     RVISPASSRLDQYEVARLRAIGARPARPLLPETGD"
     gene            complement(4277..5632)
                     /locus_tag="VFN38_06925"
     CDS             complement(4277..5632)
                     /locus_tag="VFN38_06925"
                     /inference="COORDINATES: protein motif:HMM:NF012602.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HET9011532.1"
                     /translation="MEGQVVHVHSEKALEARKGVLEMLLINHPLDCPICDQAGECELQ
                     DYTYQEGRAEGRYRDPKRFNPVEDFGGDVMYVANRCILCTRCVRYMDDVAHDPVLAVV
                     ERGDRALIGKAEGHDLTHPWAGNVVDLCPVGALLSKDSLNKARAWDLDRSAGICPNCS
                     QGCNMIVETRDNQVVRLRPRPNDDVNKYFMCDHGRLNYRWMNRSDRVDAPLVRERGVL
                     ATADWELALRAAAQLLAGKRAFVLASPNLSNEALFLLAKLVRKTGGTGAFRVNTGPEA
                     PLPGVEDLALRADRAANGRGAELLGFARSDTPLDGMQAGDVLIVADEELAGVDAAAAA
                     KAGAMIVVGTTLPAWARHGANVVLPIANCVEEEGTFTNLRGRVQRFLQAKAAPGLARP
                     SYFVLGDLLAAMGEGQGYWTAASAFDALAASVPGFAGMSYDTLALRGALAPDAVTGAR
                     A"
     gene            5640..>6053
                     /locus_tag="VFN38_06930"
     CDS             5640..>6053
                     /locus_tag="VFN38_06930"
                     /inference="COORDINATES: protein motif:HMM:NF016750.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011533.1"
                     /translation="MAHDPVLSVIERGDRALIGKAEEHDLTHPWAGNVVDLCPVGALL
                     SKDSLNKARAWDLDRSASVCPNCSQGCNMIVETRDNQVVRLRPRPNEQVNKFFMCDHG
                     RLNYRWMNRPDRVESPMVRQNGALATAEWEVALRSA"
BASE COUNT         1055 a         1984 c         2162 g          852 t
ORIGIN      
        1 tgacccaggg cgcctcgtgc aggtggtcgc gctcgcgatc gcccgtgcgg ttcggcccgt
       61 ggaaggtgta gagcatcatg cgcgtcatgt agaccgcggt catgaaggcc gcggccacgc
      121 ccatcacgta gcaggcgtac aggacgacgc ttccgggaat gccgagccac cgcgcgtcgg
      181 cgagcgtgga atgctcgtgc gcgcgcagga acacggagcc gaggatctcg tccttggaga
      241 agaagccgga gaagggcggg atgccggcga tggcaagcgt cgccgcccac atcagcagcc
      301 aggtggtggg catgtacttc ttcaggccgc ccatgttgcg catgtcctgc gcgtcgtcat
      361 ggttgccggt gtggtgatac gcccggtgca tggcgaagat cacggacccg gagccgagga
      421 agagcagcgc cttgaagaag gcgtgggtca tgaggtggaa cacgccggcc acgtacgccc
      481 ccgagcccac gccgatgaac atgtagccga gctgggagac ggtggagtac gcgaggacct
      541 tcttgatgtc ccactgcttg agcccgatcg aggcagcgaa gatcgccgtc agggcgccga
      601 tcagcacgac ggtgaggccg gccgcgggcg ccagcgcgaa caggaagttg ctgcgggcga
      661 tgaggtacac gcccgccgtc accatcgtcg cggcatggat aagggccgag acgggggtcg
      721 gaccggccat cgcgtcgggg agccagacgt agagcgggat ctgggcgctc ttgccggcgc
      781 agccgaggaa catgaacagg cagatggcgg tgacgagcgc gccgccgaag acgagctgtc
      841 cgggcgccgc cgcggcgatg ccgacgaagt cgagcgtccc gaggttggcg aacagcatga
      901 acatcgcgat cagcagcccg aagtcgccga cgcggttcac gatgaacgcc ttcttgccgg
      961 cgtcggcgtt ggccttctcg ctgaaccaga agccgatgag caggtacgag cagagcccca
     1021 ccccctccca cccgacgaac agcacggggt agttggcgcc gagcaccagc acgagcatga
     1081 agaagacgaa caggttcagg tacgcgaaga agcgcgggta cccggggtcg tcctgcatgt
     1141 agccgacgct gaagatgtgg atcagcgtcc cgacgccggt gatgatgagc accatcacct
     1201 tcgacagctg gtcgagctgg aacgcggcgt cgatctggag gtcgccgacc ggcatccagc
     1261 tgaagtagcg ctggacgaag ggcgcgtgca tctcgccgcc ccccgccccg cgcagcgcgg
     1321 cgaagatggc gacggcgagg aggaaggaga gggcgaggac gcccggcccg atcaggctgg
     1381 tgagggtggc gaagcggtgc cgcaccaccg gatggtggtc gtcgccgtgc gccccggcgc
     1441 ccgcgccatg cgcgggcgcc gcgtcgtggc cgtgcgccgc gtcgtggccc gcgcccgggt
     1501 cgcccgggcc ggcccgatag gcgctggcga gggacagcag cccgttgagc aggaagccga
     1561 ggagcggaag gagcggcagg agccacacgt actccgccgc cgtcccgctg agcggatgcc
     1621 cacccgcctg catcgcgtct gctgcatgct ggaggagcat cagcccttga ggagattgat
     1681 gttcgacagg ttgaccgtct ggcggtggcg gaacagcgcg atgatgatcg ccagcccgac
     1741 ggccgcttcc gcggccgcca ccgtcatgac gaagaagacg aacacctggc cggccacgcc
     1801 gtagacctgc gcgaacgcga cgaaggtgag gttcacggcg ttgagcatga gctccacgca
     1861 catgaacacg atgatggcgt tgcggcgggt cagcacgccg acgacgccga tcacgaacag
     1921 gacggcactg aagaacagcg actcagcgag cacgggaacg ctccttccgc ttgccgagca
     1981 ccacggcgcc gacgacggcg gcgagcagga gcacgctcgt gagctcgaac gccagcaggt
     2041 actcgttgaa caggggcccg gcgagcgggg cgatcgcccc cgaccgggcg aactccgacg
     2101 ccagggcgcc ctcgggcagc gtgagcgcct cgggcaggcg cgcccgcgtg agcgcgaaca
     2161 cctgggccag cagggcgagc ccgaggaggc cggcggccag cttccaccag aggccgcgcg
     2221 cgtcggcgag ctcggacggg tgcccgaggt tgagcagcat gatgacgaag aggaacacca
     2281 ccatgatcgc cccggcgtag accagcacct gcatcgcccc gatgaactgg gcgtcgagca
     2341 gcacgtacat cgccgccagg cagaacatcg tggtcacgag ccacagcgcc gccgacaccg
     2401 ggctcttccg ggtcacgaag gcgatcgccg acacgatggc gatgatcccg aacaggtaga
     2461 agtggaagac gtagaacagc ggaagagcgt tgtgcgtcat cactccccct tcgggtccat
     2521 ggggtcccac agctcggcca ccggatgggt ctgggccatc aggcgctcca ggtcgtacac
     2581 gaacccttcg cggctgtact cggcgttctc gtagtgccgg cccacgtgga tcgcctcctc
     2641 cgggcacacc tcctggcagt agccgcagaa gatgcagcgg aactcgtcga tctcgaacag
     2701 cagcgggtag cggttgccct tctcgtcctc gccgggcacc agcttgatgc agttggccgg
     2761 acagaccgtg gggcacaggc cgcaggcgac gcacttcgcc ttgccgtcct cggtggtcag
     2821 catgcggtgg gtgccgcgcc accgcttgct gatcgactcc ttctgctcgg gatactgcgt
     2881 ggtgaccttc tccgggttga gcatgtgctt cagcgtgtgc gccatccccg tgagggtggc
     2941 gcgcacgtag ctcgtctgtt ccgtcggtcg ctggacgact ttcacaccga tggacatcag
     3001 tctccggtct cgggaaggag tgggcgggcc ggccgcgcgc cgatggcgcg gagccgggcg
     3061 acctcgtact ggtcgagccg cgaggaggcc gggctgatga cccgcccccg gtcgaggatc
     3121 atgaagagga cgatgacggc gacgatgttg agcatcgcga ggccgagatg gaacggccac
     3181 gagccctggg cgaagccgag gtactggagc aggacgatca ggccggcgat caccacgatg
     3241 tacgccagcg cgagcggcag catgaacttc cagccgagcg acatgagctg gtcgtagcgg
     3301 aagcgcggca gcgtccagcg gatccacatg aagaggaaca ggaagaacag cgtcttcgtg
     3361 gcgaaggcgc ccatcgtgag gagcgtcttg agcccggtgt gcggcgcgag gttgtcccac
     3421 agcgtgaacg ggatgtccca cccgccgaag aacagcgtcg ccatcagcgc gctcgccgtg
     3481 atcatgttgc agtactcggc gatgaagaac agcgagaact tcatcgcgct gtactcggtg
     3541 tgatagccgg tgatgagctc cgattccgcc tccggcaggt cgaacggcag ccggttggtc
     3601 tcggcgaacg cggcgacgag gaagatgaag aacgcgaccg tgaggttgat gacgttccag
     3661 gtctcgaacg cctgctggtt cacgatgcgg ctcagcgaca cgttgccggc cagcaggagg
     3721 acgggaatgg tggccatccc catggagatc tcgtaggaga ccatctgggc gctggaccgg
     3781 atgctgccga gcagggcgta cttgttgttg gacgaccagc cggcgagcac gatgccgtac
     3841 acgccgagcg acgagatggc gaggatgaag aggaagccga tgggcagcgg cgccaggacc
     3901 atctccatca gcccccaccg cgagccccac ggcgccccga acgggatcac cgcccaggtg
     3961 atcatcgccg ggatgaacga gatcaccggc gccaggatga acaggggcag gttggccgcg
     4021 tcggggtacg tctcctcctt cacgaagttc ttcaccccgt cggcgatcgg ctggagccag
     4081 cccttgccga cgcgattcgg gccgtgccgg tcctgcatcc acgccgagat cttgcgctcg
     4141 gcgagggtga gcagcgcggc gccgagcatg tacagggtga agatggcgat gagcttcacg
     4201 acggtggcgg cgatccagaa gccgaacccg ggctccgtgg tgggaccggc gatctggagg
     4261 agcgcggcgg cgggcgtcat gcgcgcgctc ccgtcaccgc gtccggtgcc agcgcgcccc
     4321 ggagggcgag ggtgtcgtac gacatgccgg cgaagccggg caccgacgcg gccagcgcgt
     4381 cgaacgccga cgccgccgtc cagtacccct gcccctcgcc catcgcggcg agcaggtcgc
     4441 cgaggacgaa gtagctgggc cgcgccagac cgggcgccgc cttggcctgg aggaagcgct
     4501 gcacccggcc gcggaggttc gtgaaggtcc cctcctcctc cacgcagttg gcgatcggca
     4561 gcacgacgtt cgccccgtgc cgcgcccacg cgggcagggt ggtgccgacg acgatcatcg
     4621 cgccggcctt cgccgctgcg gcggcatcga cgccggcgag ctcctcgtcc gcgacgatca
     4681 gtacgtcgcc ggcctgcatc ccgtccagcg gggtgtcgct tcgcgcgaag ccgagcagct
     4741 cggcgccgcg cccgttggcg gcgcggtcgg cgcgcagcgc gaggtcctcg acgcccggca
     4801 gcggcgcctc aggacccgtg ttcacgcgga aggcaccggt gcccccggtc ttgcgcacca
     4861 gcttcgcgag gaggaagagc gcttcgttgg acaggttggg cgacgcgagc acgaaggcac
     4921 gcttgccggc gaggagctgc gccgccgcac ggagcgcgag ctcccagtcg gcggtggcga
     4981 gcacgccgcg ctcacgcacc agcggcgcgt ccacgcggtc cgaccggttc atccagcggt
     5041 agttcagccg gccgtggtcg cacatgaaat acttgttcac gtcgtcgttg ggccgcggcc
     5101 gcaaccggac cacctggttg tcgcgcgtct cgacgatcat gttgcagccc tgcgagcagt
     5161 tggggcagat gcccgccgac cggtcgaggt cccaggcgcg cgccttgttg agcgagtcct
     5221 tgctcagcag cgcgcccacc gggcacaggt ccaccacgtt gcccgcccac gggtgggtga
     5281 ggtcgtgccc ctcggccttc ccgatcagcg cgcggtcgcc gcgctccacc acggcgagca
     5341 cgggatcgtg cgcgacgtcg tccatgtacc ggacgcagcg cgtgcagagg atgcaccggt
     5401 tggcgacgta catgacgtcg ccgccgaagt cctccaccgg gttgaagcgc ttgggatcgc
     5461 ggtagcggcc ctcggcgcgt ccttcctgat acgtgtaatc ctggagctcg cactcgcccg
     5521 cctggtcgca gatcgggcaa tcgagcgggt ggttgatgag cagcatctcg agcacgccct
     5581 tccgcgcctc gagcgccttc tcggagtgca cgtgcaccac ctgcccttcc atcaccgtcg
     5641 tggcgcacga tccggtgctg tcggtgatcg agcgcggcga ccgcgcgctg atcggcaagg
     5701 ccgaagagca cgacctcacc catccgtggg cgggcaacgt ggtggacctc tgcccggtgg
     5761 gcgcgctgct gagcaaggac tcgctcaaca aggcgcgcgc gtgggatctg gaccgctcgg
     5821 ccagcgtgtg cccgaactgc tcgcaggggt gcaacatgat cgtcgagacg cgcgacaatc
     5881 aggtcgtgcg cctgcggccg cgccccaacg agcaggtcaa caagttcttc atgtgcgatc
     5941 acggccgact caactaccgg tggatgaatc gccccgaccg tgtggagtcg ccgatggtgc
     6001 gccagaacgg cgcactggcg acggccgagt gggaggtcgc gctgcgctcg gcg
//
LOCUS       DASSYW010000434         2341 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_201425, whole genome shotgun sequence.
ACCESSION   DASSYW010000434 DASSYW010000000
VERSION     DASSYW010000434.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2341)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2341)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2341
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_201425"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..772
                     /locus_tag="VFN38_06935"
     CDS             <1..772
                     /locus_tag="VFN38_06935"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HET9011534.1"
                     /translation="SGGRLVTTMSRGFLPAFWDQFGVPQERLLGRFQETLRVWRAALA
                     GEKVDVEGEFWGATRGRLAPPPYQTGGWPIWGGGNASAAAVRRSAEYGAAWTCDPMPM
                     TREAWESTVGVYRERAGELGKEPFVVLMRDGWVADTVEQAAEVFGEHFVRIARFYRRT
                     GNLRRHPGMATDDDITVASVTPHLVMGDAQTCIERLVRLHEDLGVDYVVFCCRLTTGP
                     SMAAAREQILRFGEEVVAPIHARYPAPDHPAIPEACRW"
     gene            760..1485
                     /locus_tag="VFN38_06940"
     CDS             760..1485
                     /locus_tag="VFN38_06940"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HET9011535.1"
                     /translation="MPVVNRLDGRVALVTGAAGGIGRAIVARLASEGAYVVANDLEEA
                     EVDGAGAFVRGSVAEDAAAIVAGAGDRLDILVNNAGVVRDAPLHRMSDDDWRLVHDVG
                     LYGAFAMSRAAAPLLREPAEHHRKVVNMASNVALHGAPGTANYAAAKAGLIGFTRSLA
                     REWARRRVNVNAIAPGLIAGTAMTGAKPAELIARVEAQIPLGRAGTPEDVAACVAFLA
                     SPDSDFMTGQVLELSGGLEVPQA"
     gene            complement(1657..>2341)
                     /locus_tag="VFN38_06945"
     CDS             complement(1657..>2341)
                     /locus_tag="VFN38_06945"
                     /inference="COORDINATES: protein motif:HMM:NF017771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DUF899 domain-containing protein"
                     /protein_id="HET9011536.1"
                     /translation="KEKQHTRARDALATERRRMPWLAVEKEYKFDGPDGAASLLDLFD
                     GRRQLIVYRAFFEPGVHGWPEHACVGCSNVADQVGHPAHLNARDTTLAFVSRAPQEDI
                     ARVKARMGWEHIPWYTLTDDFDADFGVGEWHGTNAFIRDGDRVYRTYFVDKRGDEALG
                     STWSYLDITALGRQETWEDSPVGYPQTPTYEWQNWHDAYDDAGPSDDWREQIERGIQA
                     TTSAGRGGR"
BASE COUNT          295 a          825 c          879 g          342 t
ORIGIN      
        1 gtcgggcggc cggctggtga cgacgatgtc acgcggtttc ctgccggcgt tctgggacca
       61 gttcggcgtc ccgcaggaac ggctgctcgg gcgcttccag gagacgctgc gggtgtggcg
      121 cgccgcgttg gcgggggaga aggtcgacgt cgaaggcgag ttctggggcg cgacccgcgg
      181 gcgcctggcg ccgccgccgt accagacggg cgggtggccg atctggggtg ggggcaacgc
      241 gtcggcggcc gcggtgcggc gctccgccga gtacggcgcg gcgtggacct gcgatccgat
      301 gccgatgacc cgcgaggcgt gggagtcgac cgtcggcgtc taccgcgagc gagcggggga
      361 gctcggcaag gagccgttcg tcgtgctgat gcgcgacggc tgggtggcgg acacggtcga
      421 gcaggccgcc gaggtgttcg gcgagcactt cgtccggatc gcgcgcttct accgcaggac
      481 cgggaacctg aggcgccacc cgggcatggc gaccgacgac gacatcaccg tggcgagcgt
      541 cacgccgcac ctggtcatgg gcgacgccca gacgtgcatc gaacggctcg tccggctgca
      601 cgaggacctt ggcgttgact acgtggtctt ctgctgccgg ctgaccacag ggccgtcgat
      661 ggcggcggcg cgcgagcaga tcctgcgctt cggcgaggag gtcgtggcgc cgatccacgc
      721 gcgctatccg gccccggacc acccggcgat cccggaggca tgccggtggt gaaccgcctg
      781 gacggccgcg tcgcgctggt gaccggcgcc gcgggtggca tcggccgcgc gatcgtcgcc
      841 cggctcgcgt ccgagggtgc ttacgtagtc gcgaacgatc tggaggaggc cgaggtcgac
      901 ggtgccgggg cgttcgtgcg cggcagcgtc gccgaggacg ccgcggcgat cgtcgccggc
      961 gccggcgatc gcctcgacat cctcgtcaac aacgccggcg tggtccgcga cgccccgctg
     1021 caccgcatga gcgacgacga ctggcggctc gtccacgacg tcggcctcta cggcgcgttc
     1081 gcgatgtcac gcgccgccgc gccgctcctg cgcgagccgg ccgagcacca tcgcaaggtg
     1141 gtcaacatgg cgtccaacgt cgccctccac ggggcgccgg gcactgccaa ctacgccgcg
     1201 gccaaggcgg gcctgatcgg cttcacccgt tcgctcgcgc gcgaatgggc gcgccgccgg
     1261 gtcaacgtca acgcgatcgc ccccggcctg atcgccggca ccgcgatgac cggcgccaag
     1321 ccggccgagc tgatcgcgcg cgtggaagcg cagatcccgc tcggccgggc gggcacgccg
     1381 gaggacgtcg ccgcgtgcgt ggcgttcctg gcgtcgccgg actccgactt catgacgggc
     1441 caggtgctcg agctcagcgg cgggctggag gtgccccagg cgtgatcagc ccgctctcgt
     1501 aggccaggat cacggcctgg acgcggctgt gcaggcctcg cttgcaccgc gctgcggccg
     1561 cccgcgatca gcagcggggc tgcaggccgg gttcaccgat ggtatcgccg cgatgaccga
     1621 cgccacgatg gcgctcggca tcctgatcgc ctcacctcac cgccctcctc ggccggcgct
     1681 cgtggtggcc tggatcccgc gctcgatctg ctcccgccag tcgtcggacg gcccggcatc
     1741 gtcgtacgcg tcatgccagt tctgccactc gtacgtcggg gtctgcgggt agcccaccgg
     1801 cgagtcctcc cacgtctcct ggcgcccgag cgcggtgatg tcgaggtagc tccacgtgct
     1861 gcccagcgcc tcgtcaccgc gcttgtcgac gaagtaggtc cggtagacgc ggtcgccgtc
     1921 gcggatgaac gcgttggtgc catgccactc gccgacgccg aagtcggcat cgaagtcgtc
     1981 ggtgagcgtg taccacggga tgtgctccca gcccatccgc gccttgacgc gggcgatgtc
     2041 ctcctgcggc gcgcgcgaga cgaacgcgag cgtggtgtcg cgcgcgttga ggtgggcggg
     2101 gtggccgact tggtcggcga cgttggagca gccgacgcac gcgtgctcgg gccagccgtg
     2161 gacgccgggc tcgaagaacg cgcggtagac gatcagctgg cgccggccgt cgaacaggtc
     2221 gagcaggctc gccgcgccgt cgggcccgtc gaacttgtac tccttctcga cggccagcca
     2281 cggcatgcgc cggcgctcgg tggccagcgc gtcgcgcgcc cgcgtgtgct gcttctcctt
     2341 g
//
LOCUS       DASSYW010000435         3641 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1394926, whole genome shotgun sequence.
ACCESSION   DASSYW010000435 DASSYW010000000
VERSION     DASSYW010000435.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3641)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3641)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3641
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1394926"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..234)
                     /locus_tag="VFN38_06950"
     CDS             complement(<1..234)
                     /locus_tag="VFN38_06950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011537.1"
                     /translation="MHLPGTLDGLQRETQLRIAGRARQLFDGMAVAIAAPKVHAPVDA
                     GRVPLQHLLDEADVLEELTPIERPDEAQAGNEVR"
     gene            235..>3641
                     /locus_tag="VFN38_06955"
     CDS             235..>3641
                     /locus_tag="VFN38_06955"
                     /inference="COORDINATES: protein motif:HMM:NF021596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucoamylase family protein"
                     /protein_id="HET9011538.1"
                     /translation="MKAPSDPAAHVGYHLIGAGRYSFERSIAWRPDLPQWLRRACFAW
                     ATPIYLGTIAAGTATLVAVAVEYAARHGWQGPALGAVALLALVPASELVIQLLQRVIG
                     YLIPPRRLPRIELDEVPVSARTMVIVPTLFDSVQRVEDLLAHLEVQALGNMDPRIHFA
                     LLSDFTDAGAETEPDDTAILAAARAGVEALNGRHRTSDGEDRFYLFHRARQWNAREGR
                     WMGWERKRGKIEEFNRLLRGDTSTSFTLVVGDVSILPDVKYCITLDSDTRLPRGAACE
                     LIGIIVHPLNRASFDPRVGRVTSGYGVLQPRVSVTFMSAAGSRFARLYSGHTGVDPYS
                     SAVSDTYQDLFAEGIFTGKGLYDVDAFSAALEDSVPENALLSHDLFEGLHARVALVSD
                     VEVVDDYPSSVLSHARRQHRWVRGDWQILFWLFPFVPSRRGLKRNPLTAIGRWKILDN
                     LRRSLVAPALLALLVAGWLVLPGRPGAWTAIVLGVAASQLLPFLARLLIGPGRSQSVP
                     VFLANLRDDVITAVAQIFLMLALLAFHAADAVHAITVTLTRVVVTKRRLLEWETAAST
                     ASRTAGLVGGRGLRRFVVDMISSPIIAAVVGLAILVWRRDALAVAAPFLLLWAGAPAL
                     AYRLSLPVRPRVRALRDDERARLRWTARATWRYFEVFVTEADGWLPPDNFQEGEGGEA
                     GRVARRTSPTNIGMTLLSTMAAHDLGYLTTDRLLYRLDATLRTVEGLERYQGHLLNWY
                     DTSSRAPLLPRYVSTVDSGNLAAALLTIAQGLEELAQRPQTVAQRLEGLADAAALLQR
                     ASSSTSRPETRQALSTVNSVARAMTKAVAVAVAGAGGAAATLHSYAPELEQASAELER
                     RAGEEEELADVLYWSRTVLDALASLETEPAVTPGACEALVARARGFVDAMRFEFLYER
                     RRRLFAIGYRLADADGPGRFDASFYDLLASEARLASFIAIAKGDVPQSHWFHLGRLVT
                     SVNGQATLVSWGGTMFEYLMPQLLMRSFAGTLLDQSCHAALRRQIDYGQQRRVPWGVS
                     ESAYAFTDRDGVYQYRAFGVPGLGLRRGLVDDLVIAPYATLLASQMDPAAAVANLEQL
                     TLLGAEGRYGFYESVDYNPRGRGVDLSADTLERPMVVRAYFSHHHGMS"
BASE COUNT          486 a         1265 c         1281 g          609 t
ORIGIN      
        1 gcgaacctca ttaccagcct gcgcttcatc gggacgttcg attggagtga gttcttcgag
       61 cacgtcagcc tcgtcgagca ggtgctgcag cgggacccgg ccggcgtcta cgggcgcatg
      121 gactttcgga gccgcgatcg ctaccgccat gccgtcgaag agctggcgcg cccttccggc
      181 gattcgcaac tgcgtctcgc gctgaagacc gtcgagcgtg cccggcaggt gcatgtgaaa
      241 gcgcccagcg atccggcggc gcacgtcggc taccacctca ttggcgccgg gcggtattcg
      301 ttcgaacgga gcatcgcgtg gcggccggac ctcccgcagt ggctgcggcg ggcgtgcttc
      361 gcgtgggcca cgccgatcta cctcgggacc atcgcggccg ggacggcgac gctcgtggcg
      421 gtggccgtcg agtatgccgc gaggcacggc tggcagggtc ccgcactcgg cgcggtcgcc
      481 ctcctggcgt tggtaccggc cagcgagctg gtgatccagc tgctgcagcg cgtcatcggc
      541 tatctcatcc cgccgcggcg tctcccacgc atcgagctgg acgaggtgcc agtgtcggcg
      601 cgaacgatgg tgatcgtccc gaccctcttc gacagcgtcc agcgcgtcga ggacctgctc
      661 gcgcatctgg aagtgcaggc gctgggcaac atggatccgc gcatccattt cgcgctcctc
      721 agtgacttca ccgatgccgg cgccgagacg gagccggacg acacggcgat cctggccgcg
      781 gcccgcgccg gggtagaggc gctgaacggc cggcatcgta cgagcgacgg ggaagaccgc
      841 ttctatctct tccaccgtgc gcggcagtgg aacgcccgcg aagggcgctg gatgggatgg
      901 gagcgaaaac gcggcaagat cgaggaattc aaccgcctcc tccgcggcga cacctccacc
      961 agcttcacgc tcgtcgtcgg cgacgtctcg attcttccgg acgtgaagta ctgcatcacg
     1021 ctggacagcg atacgcggct gccgcgcggg gccgcctgcg agttgatcgg catcatcgtg
     1081 cacccgctga accgcgccag cttcgatccc cgcgtcggcc gcgtcacgag cggctacggg
     1141 gtactccagc cgcgcgtcag cgtgaccttc atgtcggcgg cgggctcgcg cttcgcccgg
     1201 ctgtactcgg ggcacaccgg tgtggatccg tactcgtcgg cggtgtccga tacctatcag
     1261 gacctgtttg ccgagggcat cttcaccggg aaggggctct atgacgtgga tgcgttcagt
     1321 gccgccctcg aggattcggt tcccgagaac gcgctgctct cgcacgacct gttcgagggg
     1381 ctccacgccc gcgtcgcgct cgtctcggac gtcgaggtgg tggacgacta cccgtcgagc
     1441 gtgttgtcgc acgcgcggcg tcagcaccgc tgggtgcgcg gcgactggca gatcctcttc
     1501 tggctcttcc cgttcgtgcc gtcccggcgc gggctcaaac gaaatccgct cacggccatc
     1561 gggcgctgga agattctgga caatctgcgc cgcagcctcg tggccccggc gctcctggcg
     1621 ctgctggttg cgggctggct ggtgctgccc gggcgccccg gcgcgtggac ggcgatcgtg
     1681 ctgggcgtgg ccgcgtcgca actgctgccg ttcctggcgc gcctgctgat cgggcccggg
     1741 cgctcgcaat cggtgccggt gttcctcgcc aacctgcgcg acgacgtcat cacggcggtg
     1801 gcccagatct tcctcatgct cgcgctgctg gcgttccacg ccgccgacgc ggtgcacgcc
     1861 atcaccgtga cgctgacgcg cgtggtggtg acgaagcgcc ggctcctcga gtgggaaacc
     1921 gccgccagca ccgcctcgcg caccgccggt ctcgtgggcg gccgcggact ccgccgcttc
     1981 gtggtcgaca tgatctcgag cccgatcatc gcggccgtcg tcgggctcgc gatcctcgtc
     2041 tggcggcgcg acgcgctggc ggtggccgcg cccttcctgc tgctgtgggc gggagctccc
     2101 gccctggcct accggctcag cctgcctgtc cgcccgcgcg tccgcgcgct gcgagacgac
     2161 gagcgcgcgc gtctgcggtg gacggcacgc gcgacgtggc gctacttcga ggtgttcgtc
     2221 accgaagctg acggctggct gccgccggac aacttccagg agggcgaggg cggcgaagcc
     2281 ggtcgcgtcg cgcggcggac ctcgccgacc aacatcggca tgacgctgct ctcgacgatg
     2341 gcggcgcacg atctcggata cctgaccacc gatcgcctgc tgtatcgcct ggatgccacg
     2401 ttacggacgg tcgaaggtct cgagcgctat caggggcacc ttctcaactg gtacgacacg
     2461 tcttctcgtg cgccgctcct tccgcgctac gtgtccaccg tcgacagcgg caatctggcg
     2521 gcggcgctgc tcacgatcgc gcaggggctg gaggaactgg cgcaacggcc gcagacggtg
     2581 gcgcaacggc tggagggtct ggcggacgcg gcggcgctgc tgcagcgcgc gtcgtcctcc
     2641 acgtcgcggc cggaaacacg gcaggccctc agcacggtga acagtgtcgc gcgcgcgatg
     2701 acgaaggccg tggctgtggc cgtggccggc gccggtggcg cggcggcgac gctgcactcg
     2761 tacgcgccgg agctcgagca ggcctcggcg gagttggaac ggcgcgccgg cgaagaggaa
     2821 gagctcgccg acgtgctgta ctggtcccgc acggtgctcg atgcgctcgc gtcgctcgaa
     2881 accgaaccgg cggtcacgcc gggggcgtgc gaggccctgg tcgcgcgcgc ccgcggcttc
     2941 gtggacgcca tgcggttcga gttcctctac gagcgccgcc gccgtctgtt tgcgatcggc
     3001 taccggctcg ccgacgccga cggtccgggc cggttcgatg cctcgttcta cgatctgctg
     3061 gcgtcggagg cgcggctggc gagcttcatc gccattgcca agggcgacgt tccgcagagc
     3121 cactggttcc acctgggacg gctggtgacg agcgtgaacg gccaggcgac gctggtctcg
     3181 tggggcggca ccatgttcga gtacctgatg ccgcagctgc tgatgcgcag cttcgccggc
     3241 acgttgctcg atcaaagctg ccacgcggca ctccggcgcc agatcgacta cggccagcag
     3301 cggcgggttc cgtggggcgt ttcggagtcg gcctacgcgt tcacggaccg cgacggggtc
     3361 tatcagtacc gcgcgttcgg cgtgccaggt ctcgggctcc gccgcggcct ggtggacgat
     3421 ctcgtcatcg cgccgtatgc cacgttgctg gccagccaga tggatcccgc cgcggcggtc
     3481 gccaacctcg agcagctgac cctgctcggc gccgaggggc ggtacgggtt ctacgaatcc
     3541 gtggactaca acccgcgcgg ccgcggcgtg gacctctcgg cggacaccct cgagcggccg
     3601 atggtcgtcc gggcctactt ctcgcatcac cacggtatgt c
//
LOCUS       DASSYW010000436         2597 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1382461, whole genome shotgun sequence.
ACCESSION   DASSYW010000436 DASSYW010000000
VERSION     DASSYW010000436.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2597)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2597)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2597
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1382461"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..769
                     /locus_tag="VFN38_06960"
     CDS             <1..769
                     /locus_tag="VFN38_06960"
                     /inference="COORDINATES: protein motif:HMM:NF012928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase family protein"
                     /protein_id="HET9011539.1"
                     /translation="EVIATAGTEKDATVTAVAYGKRLGKTVIVVNDAPGFYTTRTLSA
                     YMNEAGRLLDEGASIESIDKALTDFGFPVGPITLLDEVGIDVGGKVGQVLFDAFGARM
                     APSESLRRVVESGRTGRKGKKGFYQYDDAGTKNAVDATVYQLLPGGATRIELDPVEMQ
                     QRCVLAMVNEAARCLEEGVLRSARDGDVGAVFGIGFPPFRGGPFRYVDALGAGRVVDE
                     LQALNDRFSGRFEPAAVLVDHARGKKRFYPAQGHPLP"
     gene            869..1411
                     /locus_tag="VFN38_06965"
     CDS             869..1411
                     /locus_tag="VFN38_06965"
                     /inference="COORDINATES: protein motif:HMM:NF019265.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HET9011540.1"
                     /translation="MESSDAALVTRVLHGDVNAYGALVSRYRDRYARYAIHMLGNRED
                     AEEALQDAFTRAYRSLARCEEPERFGAWLFRILVNRCRTSGARRVRRGQTFVHDEGAL
                     MKASQEHPAEQTMWREEIERALGELSADQREAFLLKYVEELGYDEMAEITGVGVSALK
                     MRVMRACDRLRTLLREVHSG"
     gene            1404..1952
                     /locus_tag="VFN38_06970"
     CDS             1404..1952
                     /locus_tag="VFN38_06970"
                     /inference="COORDINATES: protein motif:HMM:NF027875.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoamylase early set domain-containing protein"
                     /protein_id="HET9011541.1"
                     /translation="MAEWGRTTLELIVEELQQPVRLDESFERRVMVRVRRLYAQRRHR
                     GVRGWLGVASQVTHHPGWAAALAAGVVAVVTLGVLRSRPQTSPSGVPLAPVQFVLVAP
                     TAHSVAVVGDFNDWGLNDTALVATNHQGVWSVTAPVPAGVHRYAFVVNGKEWVADPSA
                     PRSAGDDFGLPSSALVVEDSTK"
     gene            1949..2566
                     /locus_tag="VFN38_06975"
     CDS             1949..2566
                     /locus_tag="VFN38_06975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011542.1"
                     /translation="MTTRPIRGLMTFALVCATFAQAGAQDPRIGNKLDAPSRAALRAL
                     IDSARVQGLPVEPLYEKMDEGQAKGADGPRIVAAVRNLTLEMASAHRALGTVATTDEI
                     KAAASAMHAGVPAVELGKIKKQSGLRRSLTMPFTVLADIVSRGVPVEAGVNAIRSLVG
                     AGAKDADLSKFQRNVSVDIDQGAPPAAAAETRAKAVPATKPDEQQ"
BASE COUNT          404 a          815 c          967 g          411 t
ORIGIN      
        1 cgaggtcatc gcgacggccg ggacggagaa ggacgccacg gtcacggcgg tcgcgtacgg
       61 caagcggctg ggcaagacgg tgatcgtcgt caacgacgcg cccggctttt acacgacgcg
      121 cacgttgtcg gcgtacatga acgaggcggg gcgcctgctc gacgagggcg cgtccatcga
      181 gtcgatcgac aaggcgctca cggacttcgg tttccccgtc ggtccgatca cgctgctgga
      241 tgaggtcggc atcgacgtcg ggggcaaggt ggggcaggtg ctcttcgacg ccttcggcgc
      301 gcgcatggcg ccgagcgaat cgctgcggcg ggtcgtcgaa tccgggcgga cggggcggaa
      361 ggggaagaag ggcttctatc agtacgacga cgcgggcacg aagaacgcgg tggatgcgac
      421 ggtgtaccag ctgcttcctg gaggagccac ccgcatcgag ttggatccgg tggagatgca
      481 gcagcggtgt gtgctggcga tggtgaacga ggccgcgcgc tgtctcgagg agggggtgct
      541 ccgctctgct cgcgacggcg acgtcggggc ggtgttcggg atcgggttcc cgccatttcg
      601 gggcggcccc ttccggtacg tggacgcgct cggggcggga cgggtggtgg acgagctcca
      661 ggcgctgaac gatcgctttt cggggcggtt cgagccggcg gcggtgctgg tggaccatgc
      721 gcgcgggaag aagcgcttct atccggcgca ggggcacccc ctcccgtaga tttcccgtaa
      781 tctggacggg cgctgcgccg aaggtcgtaa ttgtgatggt ggacggaccc tactgtgacg
      841 gtgtgatttg agagaaggtc cagacggtat ggagagctcg gacgcagcac tcgtgactcg
      901 ggtgctgcac ggcgatgtga atgcgtacgg cgcgctcgtc tccaggtacc gggaccggta
      961 cgcccgctac gcgattcaca tgctgggcaa ccgggaggac gccgaggagg cgctccagga
     1021 cgcctttacg cgcgcctatc ggtcgctggc gcgctgcgag gagcccgaac ggttcggtgc
     1081 ttggctcttc cgcatccttg tgaatcgctg tcgcaccagc ggggcacggc gcgtgcgtcg
     1141 agggcagacg ttcgtgcacg acgaaggcgc cctgatgaaa gcttcgcagg agcatccggc
     1201 ggagcagacg atgtggcggg aagagatcga gcgggcgctc ggagagctga gcgccgacca
     1261 acgggaagcg ttcctgttga agtacgtgga agagctgggg tatgacgaaa tggcggagat
     1321 taccggcgtt ggtgtgtccg ccttgaagat gcgtgtgatg cgcgcctgcg atcggctgcg
     1381 caccctgttg cgggaggttc acagtggctg agtggggacg gacgacactc gagctcatcg
     1441 tcgaagagct ccagcagccc gtgcgactcg acgagtcgtt cgagcggcgc gtgatggtgc
     1501 gggtgcggcg cctgtatgcg cagcgccgcc accgcggcgt gcgcggctgg ctgggcgtcg
     1561 cgtcgcaggt gacgcatcat cccggctggg ccgcggccct cgccgccggc gtcgtcgccg
     1621 tcgtcacgct cggcgttttg cgctcccgtc cgcagacatc tccgtcgggc gtcccgctgg
     1681 cgcccgtgca gttcgtgctc gtcgcgccca cggcgcacag cgtggcggtg gtgggcgact
     1741 tcaacgactg ggggctcaac gacaccgcgc tcgtcgccac caaccatcag ggtgtgtgga
     1801 gcgtcacagc gcctgtgccc gctggcgtgc accgttacgc cttcgtcgtg aatggcaagg
     1861 agtgggtggc cgatccgagc gccccgcgtt ccgcgggcga cgacttcggc ctgcccagca
     1921 gcgcactcgt cgtcgaggac agcaccaaat gaccacccgg ccgatccgtg ggttgatgac
     1981 cttcgctctc gtctgcgcga cgttcgcgca ggccggcgcc caggatcccc gcatcggcaa
     2041 caagctcgac gctccatcgc gcgccgccct gcgggcgctc atcgattcgg cgcgcgtcca
     2101 ggggctgccg gtggagccgc tctacgagaa gatggatgaa gggcaggcga agggcgccga
     2161 cgggccgcgc atcgtcgccg ccgtccgcaa cctcacgctc gagatggcca gcgcgcatcg
     2221 cgcgctcggc accgtcgcca ccaccgacga gatcaaggcg gctgcctcgg ccatgcacgc
     2281 cggcgttccc gccgtggagc tggggaagat caagaagcag agcggcctgc ggcgctcgct
     2341 caccatgccc ttcaccgtgc ttgccgacat cgtgtcgcgc ggcgtgccgg tcgaagcggg
     2401 ggtgaacgcg atccgctccc tggtcggcgc cggtgccaag gatgcggacc tcagcaagtt
     2461 ccagcggaac gtgagcgtcg acatcgatca gggcgcccct cccgccgccg ccgccgagac
     2521 gcgagccaag gcggttcccg ccacgaagcc cgacgagcag caatgacgga tggcgggatg
     2581 acggatggcg ggatgac
//
LOCUS       DASSYW010000437         2525 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1594734, whole genome shotgun sequence.
ACCESSION   DASSYW010000437 DASSYW010000000
VERSION     DASSYW010000437.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2525)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2525)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2525
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1594734"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..341
                     /locus_tag="VFN38_06980"
     CDS             <1..341
                     /locus_tag="VFN38_06980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011543.1"
                     /translation="LLQGVRFVKDNRLLPRGFDKAAAGADIAVRGEAAADPDFSGGGD
                     RVRYAIDVGNRAGPFTVTVELLYQPIAYRWAQNLKTYQGDEPRRFVAYYDALADESAT
                     TVAQATAQIR"
     gene            353..718
                     /locus_tag="VFN38_06985"
     CDS             353..718
                     /locus_tag="VFN38_06985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011544.1"
                     /translation="MISAAVRRNVNPVGSLDIGGDAVTVHLHRPSRPSHSGVAALDHP
                     AQGTRDQKQVQRPVDPRVVDRVRGEFREMPGFSPTLAQAARMFAIPADECVRVLTTLV
                     REGFLRCAPDGQYRIMSRG"
     gene            734..2020
                     /locus_tag="VFN38_06990"
     CDS             734..2020
                     /locus_tag="VFN38_06990"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014414.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclopropane-fatty-acyl-phospholipid synthase
                     family protein"
                     /protein_id="HET9011545.1"
                     /translation="MSTQLQPESAPGLHPGAGPGIADLDAESGRLSTGLDRWVGARVQ
                     RSIEAASVRLVLWDGSCSYPAGRRSIGDLVVRDRGTLFGLAWNPDLWFAEAYMTGRMR
                     VRGQLEPVVEALSRFAPSTPSWRERLIARFSLNTLRASRHNVQHHYDLGNAFYERWLD
                     RELVYTCAYFADPEMSLEAAQRAKLDLVCRKLRLRPGDRVVEAGCGWGALALHMARHY
                     GAKVRAFNVSGEQLAYARERAAREGLTGQVEFIDDDYRNVTGTVDVFVSVGMLEHVGR
                     RHLATLAEVITRTVRRDGGRGLLHFIGRDVAQPLNTWIRRRIFPGAYTPTLGEVTSTV
                     LAPAGMSIIDVENLRLHYARTLAHWGERFAAARDDVRQRYGDEFARGWELYLAGSEAA
                     FATGWLQLYQIVFSPREAAPPSWTRADLYDSRGLRA"
     gene            2017..>2525
                     /locus_tag="VFN38_06995"
     CDS             2017..>2525
                     /locus_tag="VFN38_06995"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HET9011546.1"
                     /translation="MIDCDALVVGGGPAGSTCARTLVNAGLNVVVADRARFPRDKVCA
                     GWLTPRVFSLLELDPAEYRATGLTLEEIDAFRTGVIGGATIETRYGGIVSYAIRRCEF
                     DHFLLRRSGAQVLDDTPIATFARHGGAWIVNDRIRTPIVVGAGGHFCPVARYLRGAAD
                     TSQPVVAKEA"
BASE COUNT          356 a          898 c          856 g          415 t
ORIGIN      
        1 ggctcctgca gggggtgcgc ttcgtcaagg acaaccggct gctgccgcgg ggattcgaca
       61 aggcggcggc cggcgccgac atcgccgtac ggggcgaggc tgcggccgac ccggacttct
      121 ccggcggcgg cgaccgcgtc cgctatgcca tcgacgtcgg caatcgtgcg ggccccttca
      181 cggtcaccgt cgagctgctc tatcagccga tcgcctaccg atgggcccag aatctcaaga
      241 cctaccaggg cgacgagccg cgccggttcg tggcgtacta cgatgcgctc gccgacgaat
      301 cagcgaccac ggtcgcacag gccaccgcac agattcgctg aaaatttgcc cgttgatctc
      361 ggctgcggtc cgtcgtaatg tgaaccctgt cggctctctc gatatcggag gtgatgccgt
      421 gacagtccat ctacaccgtc cctcccgccc gtcccattcc ggggtcgcag cgctcgacca
      481 ccccgctcaa ggtacgcgcg atcagaagca ggttcagcgc cccgtcgatc cgcgggtcgt
      541 cgatcgcgtg cgcggcgagt tccgtgaaat gccgggcttc tcgccaacgc tggcacaggc
      601 ggcgcggatg tttgcgattc ccgcggacga gtgcgtgcgt gtgctcacga cgctggtgcg
      661 cgaagggttc ttgcgatgcg cccctgacgg gcaatatcgc atcatgtcac gaggctgaag
      721 ggcgcgtgcg gccatgagca cgcaattgca gccggaatcg gcacccggtc tccaccccgg
      781 tgcggggccg ggaatcgcgg acctggatgc ggagagcggg cggctctcga ccggcctcga
      841 tcgatgggtc ggggcgcgcg tgcagcgatc gatcgaggct gcgtcggtgc ggctggtcct
      901 ctgggacggc agctgcagct accccgcagg ccgccgcagc atcggcgatc tcgtcgtccg
      961 cgaccgcggc acgctgttcg gcctcgcctg gaacccggac ctgtggttcg ccgaggccta
     1021 catgaccggt cgcatgcggg tgcgcgggca gctcgagccg gtggtcgaag cgctctcgcg
     1081 tttcgcgccg tcgacgccgt cctggcgcga gcgcctcatc gcccgcttct cgctcaatac
     1141 gctgcgcgcc tcgcgccaca acgtccaaca tcactacgac ctcggcaacg cgttctacga
     1201 gcgctggctc gaccgtgagc tcgtctatac ctgtgcctat ttcgccgatc cggagatgtc
     1261 gctggaggcg gcgcagcgcg ccaagctcga cctcgtgtgc cgcaagctgc ggctccgccc
     1321 cggcgatcgc gtcgtcgaag ccggctgcgg ctggggcgcc ctggcgctgc acatggcccg
     1381 gcactacggc gccaaggtcc gcgcgttcaa cgtctcgggc gagcagctcg cgtacgcgcg
     1441 cgaacgcgcc gcgcgcgaag gtctgaccgg ccaggtcgag ttcatcgacg acgactatcg
     1501 aaacgtgacc ggcaccgtgg acgtgttcgt gtcggtgggc atgctcgagc atgtcggccg
     1561 gcgtcacctc gcgacgcttg ccgaggtaat cactcgcacc gtcaggcgtg acggtggccg
     1621 tggcctcctg cacttcatcg ggcgcgacgt ggcgcagccg ctgaacacct ggattcggcg
     1681 ccggatcttt cccggcgcgt acacgcccac gctcggcgag gtgacctcga cggtgctcgc
     1741 gccggccggc atgtcgatca tcgacgtcga gaaccttcga ctgcactacg cgcgcacgct
     1801 cgcacattgg ggcgagcgct tcgccgcggc gcgcgacgac gtgcgtcagc gctatggcga
     1861 cgagttcgcg cgcggctggg agctctatct cgcaggctcg gaagccgcgt tcgccaccgg
     1921 ctggctgcag ctctatcaga tcgtcttctc gccgcgcgag gcggcgccgc cgtcgtggac
     1981 gcgcgccgac ctctacgact cgcgcggcct gcgcgcgtga tcgactgcga cgcgctcgtc
     2041 gtcggcggcg ggcctgccgg ctccacctgc gcgcgcaccc tcgtgaacgc cgggctgaac
     2101 gtcgtcgtcg ccgaccgcgc gcgttttccg cgcgacaagg tctgcgccgg gtggctcacg
     2161 ccgcgtgtct tcagcctcct cgagctcgat cccgccgaat accgcgccac cgggctgacg
     2221 ctggaggaga tcgatgcgtt ccgcaccggc gtcatcggcg gcgcgaccat cgagacgcgt
     2281 tacggcggca tcgtcagcta cgcgatccgg cggtgcgagt tcgaccactt cctgctgcgc
     2341 cgatcgggcg cgcaggtcct cgatgacacg ccgatcgcga cattcgcacg ccacggcggc
     2401 gcatggatcg tgaacgaccg catccggacg ccgatcgtcg tcggcgccgg cggtcacttc
     2461 tgtccggtcg cgcggtatct gcgcggcgcg gccgacacca gtcagccggt cgtcgccaag
     2521 gaagc
//
LOCUS       DASSYW010000438         2321 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1106160, whole genome shotgun sequence.
ACCESSION   DASSYW010000438 DASSYW010000000
VERSION     DASSYW010000438.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2321)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2321)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2321
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1106160"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..964
                     /locus_tag="VFN38_07000"
     CDS             <1..964
                     /locus_tag="VFN38_07000"
                     /inference="COORDINATES: protein motif:HMM:NF012562.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011547.1"
                     /translation="KSGGTAETMAQYLVVRRHLVQALGEAAAKERLVLVTDPAKGALR
                     AIAKSEGIPALEIPANVGGRFSVLTPVGILPAALMGIDTGELLAGAADMRTRCASGTL
                     AKNIAGTFAALQYLADTRHGRHVQVLMPYSDALRDMAAWFVQLWAESLGKHRAPGDAG
                     VGPTPLAALGATDQHSQVQLFMEGPPDKTVTFIGVEQGASDVEIPALHADIPELAYLG
                     GHRLGELLDIERRATAGALARRGRPNMTLSMERVDAFAVGELLMLLELATAYAGQLYG
                     VNAFDQPGVELGKQFTYAMLGRADADAARQEWNLLPKSDPSRVI"
     gene            1071..>2321
                     /locus_tag="VFN38_07005"
     CDS             1071..>2321
                     /locus_tag="VFN38_07005"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0016832 - aldehyde-lyase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphate aldolase"
                     /protein_id="HET9011548.1"
                     /translation="MHDIDTLNTLFGDAVTVTDGHVTVSRPDALATPKMDELIRTAVF
                     GEPVAREYARWLVWEVGQQAGVRPSSIHDLYMARGRNEIHGFTVPAINVRGASYDTAR
                     SIFRTALAMKAGAFILEIARSEIAYTEQRPAEYVAVMIAAALREGWRAPIFIQGDHFQ
                     VNHKKYAVAPTPEVDAVKALVREAVGAGFYNIDIDTSTLVDLSKPTHLEQQRLNYEVG
                     IDILKDVRSVEPKGVTISVGGEIGEVGTQNSTVEELEAYMDGFVKALPKGMAGLSKIS
                     VQSGTSHGGVVLADGSIADVALDLDTLERLSKVARDKYGLAGAVQHGASTLPDTAFNN
                     FPKRETAEIHLATNFQNMLYDEMPGALRNEIYAWLRENAKDERKPTDTDEQFFYKTRK
                     KALGPFKRRLWDLPEDVKRTVAKAY"
BASE COUNT          386 a          803 c          818 g          314 t
ORIGIN      
        1 caagtcgggg ggcacggcgg agaccatggc gcagtacctc gtcgtccggc ggcacctggt
       61 gcaggcgctg ggagaggccg cggcgaagga gcggctcgtg ctggtgaccg atccggccaa
      121 gggtgccctc cgcgccatcg cgaagagcga ggggatcccg gcgctggaga tccccgccaa
      181 cgtcggcgga cggttcagcg tgctcacccc cgtgggcatc ctgccggcgg cgctgatggg
      241 gatcgacacg ggcgagctgc tcgccggcgc ggccgacatg cgcacgcggt gcgcatccgg
      301 cacgctcgcg aagaacatcg ccggcacgtt cgccgcgctg cagtacctcg cggacacgcg
      361 gcacggacgc catgtccagg tcctcatgcc ctacagcgac gcgctgcgcg acatggccgc
      421 ctggttcgtg cagctctggg cggaaagcct gggcaagcat cgcgcgccgg gtgacgccgg
      481 ggtgggcccc acgccgctcg ccgcgctcgg cgcgaccgac cagcacagcc aggtccagct
      541 cttcatggag ggtccgcccg acaagaccgt caccttcatc ggcgtggagc agggggcgag
      601 cgacgtcgag atcccggccc tgcacgccga catcccggag ctcgcgtatc tgggcgggca
      661 tcgcctgggc gagctgctcg acatcgagcg gcgcgccacc gccggcgcgc tggcccgccg
      721 cggtcggccg aacatgacgc tgtcgatgga gcgcgtcgac gcgttcgccg tcggcgagct
      781 gctcatgctg ctcgagctgg cgacggcgta cgcgggacag ctgtacggcg tgaacgcctt
      841 cgatcagccc ggcgtggagc tgggcaagca gttcacctac gcgatgctcg gccgggccga
      901 cgccgacgcg gcgcggcagg agtggaatct gcttcccaaa tccgatccca gccgggtgat
      961 ctgagtcacc cgcgcgcggc cttgcgaccc ccgccgcgcg cggcgagctt gactctctcc
     1021 ccacgctccc gctccgccga cccaggcgga tgcacttatg tgaggctgcc atgcacgaca
     1081 tcgacaccct gaacaccctg ttcggcgacg ccgtcaccgt gacggacggc catgtgaccg
     1141 tctcgcgccc cgacgcgctc gccacgccga agatggacga gctgatccgc accgcggtct
     1201 tcggcgagcc ggtggcgcgc gagtacgcgc gctggctggt ctgggaggtc ggacagcagg
     1261 cgggcgtgcg cccgtcctcc atccacgacc tctacatggc gcgcgggcgc aacgagatcc
     1321 acggcttcac cgtgccggcc atcaacgtgc gcggcgcctc gtacgatacc gcccggtcga
     1381 tcttccgcac cgcgctggcg atgaaggcgg gcgcgttcat cctcgagatc gcccgctccg
     1441 agatcgccta cacggagcag cggccggcgg agtacgtggc cgtgatgatc gccgccgcgc
     1501 tccgcgaggg atggcgcgcg ccgatcttca tccagggcga ccacttccag gtgaaccaca
     1561 agaagtacgc ggtggcgccc acgcccgagg tggatgcggt gaaggccctc gtgcgcgaag
     1621 ccgtgggggc ggggttctac aacatcgaca tcgacacctc cacgctggtg gacctgagca
     1681 agccgaccca cctcgagcag cagcggctga actacgaggt cgggatcgac atcctcaagg
     1741 acgtccgctc ggtggagccc aagggcgtga cgatctccgt gggcggcgag atcggcgagg
     1801 tggggacgca gaactccacc gtcgaggagc tcgaggccta catggacggc ttcgtcaagg
     1861 cactgccgaa ggggatggcg gggctgtcga agatcagcgt gcagagcggc acatcccatg
     1921 gcggcgtcgt gctggccgac ggctcgatcg ccgacgtggc cctcgacctc gatacgctgg
     1981 agcgcctcag caaggtcgcg cgcgacaagt acgggctcgc cggcgcggtg cagcacggcg
     2041 cgtccacgct gccggacacc gcgttcaaca acttccccaa gcgggagacg gcggagatcc
     2101 atctcgcgac gaacttccag aacatgctgt acgacgagat gccgggcgcg ctgcgcaacg
     2161 agatctatgc ctggctgcgc gagaacgcga aggacgagcg caagccgacc gacaccgacg
     2221 agcagttctt ctacaagacg cgcaagaagg cgctgggacc cttcaagcgt cggctgtggg
     2281 atctgccgga ggacgtgaag cggaccgtgg cgaaggcgta c
//
LOCUS       DASSYW010000439         3519 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1447762, whole genome shotgun sequence.
ACCESSION   DASSYW010000439 DASSYW010000000
VERSION     DASSYW010000439.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3519)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3519)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3519
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1447762"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(106..693)
                     /locus_tag="VFN38_07010"
     CDS             complement(106..693)
                     /locus_tag="VFN38_07010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011549.1"
                     /translation="MHRHAARLRTIVLLSSALALAACADAPVASRALAPSAASRDVVA
                     STPNAAAGSLAGMDRVNLTIPTQFHAQNPCAGGRFGEIVVFTGDQHLVFFESSMSNGH
                     LNTKIHWNAEGVTGIGQYTGFQYNATGVTQDHTVTDATLPYTTTMINNYHIIGQGQAT
                     NMDLHETMHVTVDANGNVSAWVTDYNFSCHGDRTF"
     gene            883..2421
                     /locus_tag="VFN38_07015"
     CDS             883..2421
                     /locus_tag="VFN38_07015"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HET9011550.1"
                     /translation="MTLTPRIASAVGPVVALDADSVVPLYEQLYQGLRTAIVEGRLRR
                     GSRMPGTRMLADDLGISRNTATLAYDQLSAEGYLERRQRGGTFVARVLPDRLLLSRRA
                     PAPLVVTRHQTSARTLSARGAALAGIALPSSVNTRIAPRAFRPGVPALDAFPVALWAR
                     LSARYWRRLDRPALAYGHSAGHQPLREAIAQHLAVARGVRCTSDQVIIVGGSQQALDL
                     TMRLLLDPHDTVWLEDPGYLGARAAFTAAEARIVPVPVDDEGLIVSAGERLAPDARMV
                     FVSPAHQHPTGAVMSAARRHALLRWAHRADAWIIEDDYDSEIRYRGRPQPALQGVDGD
                     GRVIYVGTFSKTLFPALRLGYVVVPTRLVDAFRMARLVADRHSSIVEQAVLAEFITGG
                     HYARHVRRMRALYAERQDALLDAARTHLGGLVDVRPTDAGMDVVAWLPPGVDDRAVER
                     AALDVGVEARPLSPFSQAPLERGALLLNFAGYEPGALRAAMKLLAVVVATAVQAAELL
                     SAVG"
     gene            complement(2418..>3519)
                     /locus_tag="VFN38_07020"
     CDS             complement(2418..>3519)
                     /locus_tag="VFN38_07020"
                     /EC_number="1.1.5.-"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016901 - oxidoreductase activity, acting
                     on the CH-OH group of donors, quinone or similar compound
                     as acceptor [Evidence IEA];
                     GO_function: GO:0070968 - pyrroloquinoline quinone binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HET9011551.1"
                     /translation="KNQRPAFAGQTRTCGVRSNVAFDVTVVATGLAKPWSVEPLPGGD
                     FLVTEKPGRLRIVSRSGAIGEPISGVPAVDPRGQGGLLDVALSPTFATDRTIFWSFTE
                     PRDGGNGTSVARGTLAPDRKSLRDVRVIFRVLPTWNNNMHFGSRLAFGPDGMLYVTDG
                     ERSSNATRPYAQRLDSHLGKISRIRPDGSVPPDNPFVGRADAKPEIWSVGHRNVQAAA
                     FDPRGQLWAIEHGTNGGDELNRIEKGKNYGWADVGYGVEYSGAPLPGPTAKEGTEQPV
                     YYWDPVIAPSGAQFYTGDLFPAWKNSLFIGALREQRLVRLTIENGRVTGEEHLLTDRG
                     HRIRDVKQGPDGALYVVTDDDNGELWRIAPKR"
BASE COUNT          469 a         1215 c         1276 g          559 t
ORIGIN      
        1 gaatatgccg ctgtgaccgc gctcggccag ctcgggttgg gcgagtcgat ctcgtccgcg
       61 ggatcaggga agcccgaccc cgcggacgtt tcatgcgtcg agcgatcaga aggtgcggtc
      121 gccgtggcag gagaagttgt agtccgtcac ccaggcgctg acgttgccgt tggcgtcgac
      181 ggtgacgtgc atcgtctcgt gcagatccat gttcgtcgcc tggccctgcc cgatgatgtg
      241 gtagttgttg atcatcgtcg tggtgtacgg cagcgtcgca tccgtgacgg tgtggtcctg
      301 cgtcacgccc gtggcgttgt actggaagcc ggtgtactgg ccgatgccgg tcacgccttc
      361 ggcgttccag tggatcttgg tgttgaggtg gccgttgctc atggagctct cgaagaacac
      421 caggtgctgg tcgccggtga acaccacgat ctcgccgaaa cggccgccgg cgcaggggtt
      481 ctgggcgtgg aactgggtgg ggatcgtgag gttcacgcga tccatgccgg cgagcgatcc
      541 ggctgcggcg ttcggcgtcg acgcgacgac gtccctggag gcagcgctgg gcgcgagcgc
      601 acgcgacgcc accggcgcgt cggcgcaggc ggcgagggcg agggcggacg agagcaggac
      661 aatggtgcgc aggcgtgcgg cgtgacgatg catgacgaag acctctgcgg gagacggaga
      721 cgcgcgacct cgtgtcgcga tcgcggagcc tagggacgtc ggattccgcg caacagcacc
      781 agatcgcgcc cgccggacgg ggccagaaac atccactttc acgacgccgt acgggtccag
      841 cagtcgagtc gtacggcgac cgcatcgtca ggaccgcgca ccatgacgct cacaccgcgc
      901 atcgcatcgg ctgtcggacc cgtcgtcgca ctggacgcgg attccgtggt gccgctgtac
      961 gagcagctgt atcaggggct gcgcacggcg atcgtcgaag ggcggttgcg gcgcgggtcg
     1021 cgcatgccgg gcacgcgcat gctcgccgac gacctgggca tctcccgcaa cacggcgacg
     1081 ctcgcgtacg accagctgtc ggccgaaggc tacctcgagc gccggcagcg gggcggcacc
     1141 ttcgtcgcgc gcgtgctccc ggatcgcctc ctgctctcgc gccgcgcgcc ggcgccgctc
     1201 gtcgtcacgc ggcaccagac gtcagcgcgc acgctctcgg cgcgcggcgc ggcgctggcc
     1261 ggcatcgcgc tgccgtcgtc ggtgaacacg cgcatcgcgc cgcgggcctt tcggccgggc
     1321 gtgccggcgc tcgacgcctt tcccgtcgcg ctctgggcgc gcctgtccgc gcgctactgg
     1381 cgccgcctcg atcgtccggc gctcgcgtac ggccattccg ccggacatca gccgctgcgc
     1441 gaggcgatcg cccagcatct cgccgtcgcg cgcggcgtgc gctgcacgag cgaccaggtg
     1501 atcatcgtgg gtggatcgca gcaggcgctc gacctcacca tgcggctcct gctcgatccg
     1561 cacgacaccg tgtggctcga ggatcccggc tacctgggtg cgcgcgcggc cttcacggcg
     1621 gcggaagcgc gcatcgtacc ggtgccggtg gacgacgaag ggctcatcgt gtcggcgggc
     1681 gaacggctcg ctcccgacgc gcggatggtg ttcgtgtcgc cggcgcacca gcaccccacc
     1741 ggggcggtca tgagcgcggc acgccggcac gccctgctcc gctgggcgca tcgcgccgac
     1801 gcgtggatca tcgaggacga ctacgacagc gagatccggt atcgcggtcg accacagccg
     1861 gccctccagg gcgtggacgg cgatggtcgg gtgatctacg tcggcacctt cagcaagacg
     1921 ctctttcccg ccttgcgact cggctacgtc gtcgtcccga cgcgcctcgt ggacgcgttc
     1981 cggatggcgc gactcgtcgc cgaccggcac tcgtccatcg tggagcaggc ggtgctggcc
     2041 gagttcatca ccggtggaca ctacgcgcgg cacgtgcgcc gcatgcgtgc gctgtatgcc
     2101 gagcggcagg acgccctgct cgatgcggcg cgaacgcatc tgggcggact ggtcgacgtg
     2161 cgccccaccg acgcgggcat ggacgtcgtc gcgtggctgc caccgggcgt ggacgaccgc
     2221 gccgtggagc gggccgcgct cgacgtcggt gtcgaggcgc ggccgctgtc acccttctcg
     2281 caggcgccgc tcgagcgcgg cgcgctgctg ctcaacttcg ccggctacga gcccggtgcg
     2341 ctgcgcgcgg cgatgaagct gctcgccgtc gtcgtggcga ccgccgtcca ggcggcggag
     2401 ctgctgtcgg ccgtcggcta acgcttcggc gcgatccgcc acagctcgcc gttgtcgtcg
     2461 tccgtcacga cgtagagcgc gccgtcgggc ccctgcttca cgtcgcggat ccgatgaccc
     2521 cggtcggtga gcaggtgctc ctcgccggtg acgcggccgt tctcgatcgt cagccgcacc
     2581 agccgctgct cgcgcagcgc gccgatgaac aggctgttct tccacgcggg aaagagatcg
     2641 cccgtgtaga actgcgcgcc ggagggggcg atcaccggat cccagtagta gactggctgc
     2701 tccgtccctt ccttcgccgt cggtccgggg agcggcgcgc ccgaatactc cacgccgtag
     2761 cccacgtcgg cccagccgta gttcttcccc ttctcgatgc gattgagctc gtcgccgccg
     2821 ttggtgccgt gctcgatcgc ccagagctgc ccgcgtggat cgaacgcggc ggcctgcacg
     2881 ttccggtgcc ccaccgacca gatctccggc ttcgcgtcgg ctcggccgac gaacgggttg
     2941 tcgggcggca cgctgccgtc gggacggatc cgactgatct tgccgaggtg gctgtcgagg
     3001 cgctgcgcgt aggggcgcgt ggcgttggac gagcgctcgc catcggtgac gtagagcatg
     3061 ccgtccggcc cgaaggcgag gcgggaaccg aagtgcatgt tgttgttcca ggtcggcagc
     3121 acgcggaaga tcacgcgcac atcgcgcagg ctcttgcggt cgggcgccag cgtgccgcgg
     3181 gcgacgctcg tgccgttgcc gccgtcgcgc ggttcggtga agctccagaa gatcgtgcgg
     3241 tcggtggcga aggtggggct gagcgcgacg tcgagcagcc cgccctgtcc gcgcggatcc
     3301 accgcgggca cgccggagat cggctcgccg atcgcgccgc tgcgcgacac gatgcgcaag
     3361 cggcctggct tctccgtgac caggaagtcg ccgccgggca gcggctccac cgaccacggc
     3421 ttggcgagcc cggtcgcgac gacggtgacg tcgaaggcga cgttggagcg cacgccgcag
     3481 gtgcgcgtct gaccggcaaa ggccggccgc tggttcttc
//
LOCUS       DASSYW010000440         3200 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_628312, whole genome shotgun sequence.
ACCESSION   DASSYW010000440 DASSYW010000000
VERSION     DASSYW010000440.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3200)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3200)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3200
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_628312"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(69..596)
                     /locus_tag="VFN38_07025"
     CDS             complement(69..596)
                     /locus_tag="VFN38_07025"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HET9011552.1"
                     /translation="MHPHDERPYSFCPMCGGALEPRAIKQNEPERLVCVRCGFVFYLD
                     PKVAVGTIITDGGGRIALVKRAIEPGYGKWVYPGGYVDRGELVHDAAVREAREESGLI
                     VRLGRLINVYSYPGRAPVVIVYEAAIIGGALCADDECLEAQFFEPHEIPWDELAFPST
                     HDALREYLGALTARR"
     gene            620..1168
                     /gene="def"
                     /locus_tag="VFN38_07030"
     CDS             620..1168
                     /gene="def"
                     /locus_tag="VFN38_07030"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: protein motif:HMM:TIGR00079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042586 - peptide deformylase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HET9011553.1"
                     /translation="MSILKVARMGHPVLRQTARSITPSDLKDPMMQRLINDMIDTMHE
                     YHGVGLAAPQIHEDLRLFVALLDDDPGSDSEAVVLVNPEIVPLSENKAEGWEGCLSIP
                     DIRGMVPRYTDVLVRALDRTGKKVELTLKGFPARVAQHETDHLDGVLFFDRMTSMQSL
                     TFLDEYSRYHSKNDDGEDEDEV"
     gene            1175..2725
                     /locus_tag="VFN38_07035"
     CDS             1175..2725
                     /locus_tag="VFN38_07035"
                     /EC_number="2.1.1.148"
                     /inference="COORDINATES: protein motif:HMM:NF014560.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050797 - thymidylate synthase (FAD)
                     activity [Evidence IEA];
                     GO_process: GO:0006231 - dTMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent thymidylate synthase"
                     /protein_id="HET9011554.1"
                     /translation="MAGTATIETGAPVVTLRTAPRVPFDGAIAAARTCYSPRVIGANE
                     VTDSQRDTIGALTFDAGHHTVYQHANFEFGLENISRQFVWTFLHSYPFYNSEQSSQRY
                     VKLREARAFVPPITGEALSVYEQAIVKAWDRYEELSALLKDDAFAILKELRYVRPTTN
                     PERLKGIEKDSVKRAIETARYVVPIGAFTSMVHTVSGIVLHRLQRMMHTGDAPHEARV
                     VISEMVRLVKEWDPLFFEKVGAGVIEPADVTETTFPKPRAGGDAYAAQFDARLNGRWS
                     RLRDASLNAEEIVAESVRSVFGLTAEEMNDDEALDRVMNPARNRYRLDILNVSYHSPL
                     MRALHHATYVFEKRLSHTADSQDQRHRMVPASRPLLTFADTARPDFITPRLIAANPRA
                     NAVYEQAMADAWAAKNRLLALGVPLEFALYVLPNAKTLRFVESGSLLALLHKWTLRTC
                     FNAQEEIYLASMDELEQVRAAHPRIGRHIGPPCVIRNGLISPRCTEGSHFCGVPVWKD
                     FPAAVRRL"
     gene            2722..>3200
                     /locus_tag="VFN38_07040"
     CDS             2722..>3200
                     /locus_tag="VFN38_07040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HET9011555.1"
                     /translation="MNVAAWLVHLYTASGFVLAFLAAKAAIDHDFRTAFFYLSAQVFV
                     DATDGVLARAARVSERLPWFSGSKLDDLVDYLTYVFVPALIVWRALLVIDPWTTIVPS
                     AMLLSSGYGFSHMKAKTTDHFFTGFPSYWNIVVLYLLLLQLSPDVNAVILLGFAAMV"
BASE COUNT          529 a         1111 c         1031 g          529 t
ORIGIN      
        1 cgcatcttct tccatgccca gccggccgac catgcgccat gcgccaccac gaaagtcgcc
       61 atcggtggtc agcgcctggc ggtcagggcc cccaggtact cgcgcagcgc gtcgtgcgtg
      121 ctgggaaagg caagttcgtc ccaggggatt tcatggggct cgaagaactg tgcctccagg
      181 cactcgtcgt cggcgcacag tgcgccgccg atgatggccg cctcgtagac gatcaccacc
      241 ggcgcgcggc cgggatacga gtagacgttg atcaggcggc caaggcggac gatcagcccg
      301 ctttcctcgc gcgcctcgcg cacggcggcg tcgtgcacca gctcgccacg gtccacgtag
      361 ccgccgggat acacccactt gccgtagccg ggctcgatgg cgcgcttcac cagcgcgatg
      421 cggccgccgc cgtccgtgat gatcgtgccg accgccactt tcgggtcgag atagaagacg
      481 aacccgcacc gcacgcacac gagccgctcc ggctcgttct gcttgatcgc gcgcggctca
      541 agtgcgccgc cgcacatcgg gcagaaactg tacggccgtt cgtcgtgagg atgcatcgcg
      601 cggcctataa tcttccttca tgtcgattct gaaagtcgcg cgcatgggcc acccggtcct
      661 gcgacagacc gcccgctcca tcaccccgtc ggatttgaaa gatcccatga tgcagcggct
      721 catcaacgac atgatcgaca ccatgcacga gtaccacggc gtcgggctgg cggcgccgca
      781 gattcacgag gatttgcggc tgttcgtggc cctgctcgac gacgatcccg gcagcgacag
      841 cgaagcggtc gtgctggtga accccgagat cgtgccgctg tccgagaaca aggccgaagg
      901 ctgggaaggg tgcctcagca tcccggacat ccgcggcatg gtaccgcgct acaccgatgt
      961 tctcgtccgc gcgctcgacc gcacgggcaa gaaggtggag ctgaccctca agggtttccc
     1021 ggcgcgcgtg gcgcagcacg agaccgacca tctcgacggc gtgctgttct tcgaccgcat
     1081 gacgtcgatg cagtcgctca ccttccttga cgagtactcg cgctaccact cgaagaacga
     1141 cgacggcgaa gacgaagacg aggtgtagga agacgtggcg ggcactgcaa ccatcgagac
     1201 cggagcgccg gtcgtcacgc ttcgcacggc gccgagggtg ccgttcgacg gcgcgattgc
     1261 cgccgcgcgc acctgctact cgccgcgcgt catcggcgcc aacgaggtca ccgacagcca
     1321 gcgggacacg atcggcgcgc tcacgttcga cgccggccac cacacggtct accagcacgc
     1381 caacttcgag ttcgggctcg agaacatctc gcggcagttc gtctggacgt tcctgcactc
     1441 gtacccgttc tacaactccg agcagtcgag ccagcgctac gtgaagctgc gcgaagcgcg
     1501 cgcgttcgtg ccgcccatca cgggcgaggc gctgtcggtc tacgagcagg ccatcgtcaa
     1561 ggcgtgggac cgctacgagg agctgtcggc gctcctcaag gacgacgcct tcgccatcct
     1621 gaaagagctg cgctacgtcc gcccgaccac caaccccgaa cggctgaagg gtatcgagaa
     1681 ggattcggtg aagcgcgcca tcgagaccgc gcgctacgtg gtcccgatcg gggcgttcac
     1741 ttcgatggtc cacaccgtgt cgggcatcgt gctgcaccgg ctgcagcgga tgatgcacac
     1801 gggcgacgcg ccccacgaag cgcgcgtggt catctcggag atggtccgcc tggtaaaaga
     1861 atgggacccg ctcttcttcg agaaggtcgg cgcgggcgtc atcgagccgg ccgacgtcac
     1921 ggagaccacg ttcccgaagc ctcgtgccgg cggcgacgcc tacgcggcgc agttcgacgc
     1981 gcggctgaac ggccgctggt cgcgcctgcg cgacgcctcg ctgaacgccg aggagatcgt
     2041 ggcggagtcg gtgcgctccg tcttcggcct caccgccgag gagatgaacg acgacgaggc
     2101 gctcgaccgc gtgatgaacc cggcgcgcaa ccgctatcgc ctcgacatcc tgaacgtctc
     2161 gtaccattcg ccgctgatgc gggcgctgca tcacgccacc tacgtgttcg agaagcgcct
     2221 cagtcacacc gcggactcgc aggaccagcg ccaccgcatg gtgccggcgt cgcgcccgct
     2281 gctcacgttt gccgacacgg cgcggccgga cttcatcacg ccgcgcctga tcgccgccaa
     2341 cccgcgcgcc aacgcggtgt acgaacaggc catggcggac gcgtgggcgg ccaagaaccg
     2401 gctgctggcg ctcggagtgc cgctcgagtt cgcgctctac gtgctgccga acgccaagac
     2461 gctgcggttc gtcgagtcgg gatcgctgct ggcgctgctg cacaagtgga cgctgcgcac
     2521 ctgcttcaac gcgcaggagg agatctacct ggcgtcgatg gacgagctcg aacaggtgcg
     2581 cgccgcgcat ccgcgcatcg ggcgccacat cggcccgccg tgcgtgatcc gcaacgggct
     2641 catctcgccc cgctgcaccg aggggtcgca cttctgcggc gtgccggtgt ggaaagattt
     2701 cccggccgcc gtccgacggc tgtgaacgtc gcggcctggc tggtccatct ctacaccgcc
     2761 agcggcttcg tcctcgcgtt tctcgcggcc aaggcggcca tcgaccacga cttccggacg
     2821 gccttcttct acctgtcggc gcaggtgttc gtggatgcga cggacggcgt gctcgcgcgc
     2881 gccgcgcgcg tatccgagcg gctgccgtgg ttcagcggat cgaagctcga cgacctggtg
     2941 gactacctca cctacgtctt cgtgcccgcg ttgatcgtgt ggcgcgccct gctcgtgatc
     3001 gatccgtgga ccaccatcgt cccgtctgcc atgctgctat cgagcggcta cggcttcagc
     3061 cacatgaagg cgaagacgac cgatcacttc ttcaccggct tcccgtcgta ctggaacatc
     3121 gtggtgctgt acctgctgct gctgcagctg tcgccggacg tgaacgcggt gatcctgctc
     3181 gggttcgcgg cgatggtgtt
//
LOCUS       DASSYW010000441         3333 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_589818, whole genome shotgun sequence.
ACCESSION   DASSYW010000441 DASSYW010000000
VERSION     DASSYW010000441.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3333)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3333)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3333
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_589818"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..615)
                     /locus_tag="VFN38_07045"
     CDS             complement(<1..615)
                     /locus_tag="VFN38_07045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HET9011556.1"
                     /translation="MRRLVPATALLLLAAVSAQGQSTTTADAARSGAVRAAGEAPRPA
                     SDSLFRHARRLVAEGNGVAGRSLVDSLLRAADPATPAYGDALYWHGALAPTAAEAERD
                     YRRVIVEYPLAYYADDALLAIAELEQARGDRAGALAHLQRFVKEHPSSPGRGIAALGA
                     ARLAFEQRDTTLGCSMIAAARSSAPASDVELRNQIEYHGRPCAGV"
     gene            complement(641..1693)
                     /gene="holA"
                     /locus_tag="VFN38_07050"
     CDS             complement(641..1693)
                     /gene="holA"
                     /locus_tag="VFN38_07050"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR01128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HET9011557.1"
                     /translation="MASAGEKALHAALKKRAFDPVYFLFGEDDYLKDARTRELVEAAV
                     DPATRDFNLELRRGNELDAETLDALLGTPPMLAERRVVVVRDVDKLKKDARALLLRYL
                     DRPAPDVVLVLVAPAGAKADKPIADRSTAVEFAPLTGDRLPRWVAYHAETVLGRPITP
                     DAVALLLEAVGAGLSQLAVELEKLASFAADTIDERAVAEVVGVRRGESVGALLDAVAA
                     KDASAALALVPGVLQQPKTNAVSIVMSLTTQTLAMAYGAAARASGTPSRALFNEYMAL
                     LKESGAFPGRPWGEAVTAWARNTDRWSVSELDAALSALLSADSALKETRLSSDEQLLT
                     SLVLALCGAGSTRRAA"
     gene            complement(1772..2314)
                     /locus_tag="VFN38_07055"
     CDS             complement(1772..2314)
                     /locus_tag="VFN38_07055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011558.1"
                     /translation="MNCREFRHNHDAFIDDTLSGDELEAMARHRDYCAACSRLDTRVR
                     RALLVAHNLPTIQPSARFAERLQLRLAQERALVAAARASRGAITDSRWRPLSVSAYAA
                     MAAGILAAAGLAAALSGMGREQQAIRLAPVVATLPEMEPSTLATPAMVASMPTGMTVW
                     PALYVAQQAPWHFASDAVGR"
     gene            complement(2508..3143)
                     /locus_tag="VFN38_07060"
     CDS             complement(2508..3143)
                     /locus_tag="VFN38_07060"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HET9011559.1"
                     /translation="MADVAMKRVAQTGQTIREQLRAMDDAEVVTSFLGGEERAFQELV
                     ERYQTRLLNFIYRTIGDREKAEDLVQEVFIRVYRHLHRFDRSKKFSTWAYTIASNLAK
                     NELRNRSRNPLVLFQTMKGNWDDDDRPLQFEDATARPDDLYRKRHLRELVAETVAKLP
                     EHHRQVFVLRELEGKSYEEIAEITDCNLGTVKSRLNRARNAFAEIIEPWVD"
BASE COUNT          491 a         1174 c         1156 g          512 t
ORIGIN      
        1 gacgccggcg cacgggcggc cgtggtactc gatctggttc cgcagctcga cgtccgacgc
       61 cggcgcggag gaccgggcgg cggcgatcat cgagcagccg agcgtcgtgt cgcgctgctc
      121 gaacgcgagc cgcgctgcac cgagcgccgc gatgccgcgc cccgggctgg acggatgctc
      181 cttcacgaac cgctggagat gtgccagggc gcccgcccga tcgccgcgcg cctgctccag
      241 ctccgcgatc gcgagcagcg cgtcgtccgc atagtaggcg agcggatact ccacgatcac
      301 ccggcggtag tcgcgctccg cttcggccgc cgtcggcgcg agcgcgccat gccagtacag
      361 cgcgtcgccg tacgcgggcg tcgccggatc ggcggcgcgc agcagggagt ccacgagcga
      421 gcgacccgcg accccatttc cctcggccac cagccggcgg gcatggcgga agagcgagtc
      481 gcttgccggg cggggcgcct cgccggccgc gcgcaccgcg ccggaccgcg ccgcgtcggc
      541 ggtggtggtg gactggccct gcgccgaaac ggcggcgagc agcaggaggg cggtggcggg
      601 gacgagacgg cgcatcggca gatttggagg atacgcgcgg tcaggccgcg cggcgcgtcg
      661 agcccgcgcc acacagcgcg agcacgagcg aggtgagaag ctgctcgtcc gaggagaggc
      721 gcgtttcctt gagcgccgag tcggccgaca gcagcgccga gagcgccgca tccagctcgg
      781 acacgctcca ccggtcggtg ttccgggccc aggcggtgac cgcctcgccc catggccgtc
      841 cgggaaacgc gccgctctcc ttgagcagcg ccatgtattc gttgaacagc gcgcgcgacg
      901 gcgtgccgct cgcccgcgcc gctgcaccat acgccatcgc gagcgtctgc gtggtgaggc
      961 tcatcacgat ggagaccgcg ttcgtcttgg gttgctggag cacaccgggc acgagggcga
     1021 gcgccgcgga cgcatccttc gccgccactg cgtcgagcag cgcgcccacc gattccccac
     1081 ggcgcacgcc caccacctcg gccaccgcgc gctcgtcgat cgtgtcggcg gcgaagctcg
     1141 cgagcttctc gagctccacg gcgagctggg acaggccggc gccgaccgct tccagcagca
     1201 gtgccaccgc gtcgggggtg atcggccggc cgagcaccgt ttcggcgtgg taggccaccc
     1261 acctgggcag ccggtcgccc gtgagggggg cgaactccac cgcggtgctg cggtcggcga
     1321 tcggcttgtc ggccttcgct cccgccgggg cgacgaggac cagcaccacg tccggcgccg
     1381 gacgatcgag gtaccgcagg agcagcgcgc gcgcgtcctt cttcagcttg tccacgtcgc
     1441 gcacgaccac cacgcggcgc tccgccagca tcgggggcgt gccgagcagc gcgtcgagcg
     1501 tctcggcgtc cagctcgttg ccgcggcgca gctcgagatt gaagtcgcgc gtcgccgggt
     1561 ccaccgccgc ctccacgagc tcgcgcgtgc gcgcgtcctt caggtagtca tcctctccga
     1621 agaggaagta gaccggatcg aaggcgcgct tcttcagcgc ggcatgcagt gctttttccc
     1681 cggcggacgc catgcgggaa atataggagt ccgggcgtcg agcgtgagac gggatggcgg
     1741 cgggaggagg cctccctcgg gcctcctgcc cctatcgtcc cacggcgtcg ctggcgaagt
     1801 gccagggagc ctgctgcgcg acgtacaggg ccggccacac cgtcatgccg gtgggcatcg
     1861 acgccaccat cgccggggtc gcgagggtgg agggctccat ctcggggagc gtggcgacga
     1921 cgggggccag gcggatggcc tgctgttcgc gacccatgcc ggagagcgcc gcggcgagcc
     1981 ccgctgccgc gaggatcccg gctgccatcg ccgcgtatgc gctgacggac aggggccgcc
     2041 accggctgtc ggtgatggcc ccgcgcgacg cccgtgcggc ggcgacgagc gcacgttcct
     2101 gcgcgaggcg aagctgcaac cgctcggcga accgcgccga cggctggatc gtcggaagat
     2161 tgtgcgccac gagcaacgcg cgccggacgc gggtgtcgag tcgcgagcac gccgcgcaat
     2221 agtcacggtg ccgcgccatc gcctccagct catcgccgct cagcgtgtcg tcgatgaagg
     2281 catcgtgatt gtggcggaac tcccgacagt tcatggggcg gtggcagtgg tgatggggcg
     2341 tgtcatcggc tgccctgcgt acccctcggg gcgagggggt gttccccgcg agacggtgat
     2401 cagtgaatgg tgaacggttt gcgcgccgca caaatagaga tcgggcaccc ggcgttcgcc
     2461 agagtgcccg attcccatct tgccgccgtt caccgaccac tggccgttca gtctacccag
     2521 ggctcgatga tctcggcgaa cgcgttccgc gcgcggttca gccgcgactt caccgtgccg
     2581 aggttgcagt ccgtgatctc ggcaatctcc tcgtacgact tcccctccag ctcgcgcagg
     2641 acgaacacct ggcggtgatg ctccggcagc ttcgccaccg tttcggccac cagctcgcgc
     2701 aggtgccgct tgcggtagag gtcgtccggt cgcgccgtgg catcctcgaa ctgcagcggc
     2761 cgatcgtcgt cgtcccagtt ccccttcatc gtctggaaga gcacgagcgg gttccgcgac
     2821 cggttccgca gctcgttctt cgccaggttg gaggcgatgg tataggccca ggtggagaac
     2881 ttcttcgatc gatcaaagcg atggaggtga cggtagacgc ggatgaacac ctcctgaacg
     2941 aggtcctccg ccttttcccg gtccccgatc gtgcgataga tgaagttcag caggcgcgtc
     3001 tgataccgct ccacgagttc ctggaaggcg cgctcctccc cgcccagaaa cgacgtgacg
     3061 acttccgcat cgtccatcgc gcgaagctgt tcgcggatcg tctggcccgt ctgggcgacc
     3121 cgcttcattg cgacgtcagc catgttctca acccccagtg ccttacgtaa gagatacgct
     3181 tcgacgatgc agattcgatt cagcgctcct tggtctcttg ttcccgcccc tgtaaaggca
     3241 gatggcatgc ccaggccggc ccgatcgcat cctgatcgta agctgcccag ccacaacatc
     3301 ttacggacac tgctcacgtc gctcggccac gct
//
LOCUS       DASSYW010000442         2335 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_762433, whole genome shotgun sequence.
ACCESSION   DASSYW010000442 DASSYW010000000
VERSION     DASSYW010000442.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2335)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2335)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2335
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_762433"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1325)
                     /locus_tag="VFN38_07065"
     CDS             complement(<1..1325)
                     /locus_tag="VFN38_07065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HET9011560.1"
                     /translation="MPTTEERFKLVSDFTVRGDQVHAVPELVDGLRRGDPHQVLLGVT
                     GSGKTFTMAQVVAEVNRPTLVMAHNKTLAAQLFQEFRRFFPENAVEYFVSYYDYYQPE
                     AYVPATDSYIEKEATVNDEIDRMRLSATRSLFERRDVIIVASVSCIYGLGSPEAYYGM
                     VLPLEKGQRIERDDILRKLVEIQYERNDVEFGRGTFRVRGDIVEVVPSYEEHALRIGL
                     FGDEVDELAWFDPLTGKVLKRIEKVSVFPKSHFVTSRDRTKLAVESIKAELAERRGFL
                     ESEGKLLEAQRLHQRTMFDLEMMREIGYCHGIENYARHLTGRAPGEPPPTLLDYLPDD
                     ALVIVDESHQTVPQIRGMFFGDRSRKEVLVSYGFRLPSALDNRPLNFEEWERRVPQVV
                     FVSATPGPYELSKAQGVVVEQVIRPTGLMDPPIEIRPVKGQVDDLLQEIR"
     gene            complement(1459..>2335)
                     /locus_tag="VFN38_07070"
     CDS             complement(1459..>2335)
                     /locus_tag="VFN38_07070"
                     /inference="COORDINATES: protein motif:HMM:TIGR03436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HET9011561.1"
                     /translation="AAGVFAAQQPVFRAETDLVTVGVTVRDRTGGPIRDLDQADFTVT
                     EDGRAQTITYFARGDQENGAVETHVGLLLDTSSSMGADIELARKAAVRFLNTVSDAVD
                     MTLVDFDTEVRVTRYTQQDFPRMVERIRSRKQLGNATALYDALGVYLDGAAEADGRTV
                     LVIFTDGGDTRSSIPFKDVMDLLRATDVTVYSVGFLEHQPSSVRTEQRVRLTQMAEET
                     GGEAIFPLSMKEIESAYDRVVAGIRAQYTLGYTSSNTARDGRWRRVEVKVARTARTRD
                     LRVLTRKGYFAPFVK"
BASE COUNT          364 a          793 c          772 g          406 t
ORIGIN      
        1 cggatctcct gaagcagatc gtccacctgc cccttgaccg gccggatctc aatcggcgga
       61 tccatcagac cggtgggccg gatcacctgc tccaccacga cgccctgcgc cttcgacagc
      121 tcgtacggac cgggcgtggc ggagacgaac accacctgcg gcacccgccg ctcccactcc
      181 tcgaagttga gcgggcggtt gtcgagcgcc gacgggaggc ggaagccgta cgacaccagc
      241 acttccttgc gcgatcggtc gccgaaaaac atgccgcgga tctgcgggac cgtctggtgg
      301 ctttcgtcca cgatcaccag cgcgtcgtcc ggcaggtagt cgagcaaggt cggcggcggc
      361 tcgcccggcg cgcgccccgt gaggtggcgg gcgtagttct cgatgccgtg gcagtagccg
      421 atctcgcgca tcatctcgag gtcgaacatc gtgcgctggt ggagacgctg cgcctcgagc
      481 agcttgcctt ccgattcgag aaagccgcgc cgctcggcga gctccgcctt gatcgattcc
      541 accgccagct tcgttcggtc gcgcgacgtg acgaagtgcg acttcggaaa caccgacacc
      601 ttctcgatcc gcttcagcac cttgccggtg agcggatcga accaggccag ctcgtccacc
      661 tcgtcgccga agaggccgat gcgcagcgcg tgctcctcgt aggacggcac gacctcgacg
      721 atgtcgccgc gcacgcggaa ggtgccgcgg ccgaattcca cgtcgttgcg ctcgtactgg
      781 atttccacca gcttgcgcag gatgtcgtcg cgctcgatgc gctgcccctt ctcgagcggc
      841 agcaccatcc cgtagtacgc ctcgggcgag cccaggccgt agatgcacga cacgctggcc
      901 acgatgatga cgtcgcgccg ctcgaagagc gaccgggtcg ctgacaggcg catgcggtcg
      961 atttcgtcgt ttaccgtggc ctccttctcg atgtacgagt cagtggccgg cacgtaggct
     1021 tcgggctggt agtagtcgta gtagctgacg aaatactcga cggcgttctc gggaaagaag
     1081 cgccggaact cctgaaagag ctgggcggcc agcgtcttgt tgtgagccat caccagcgtg
     1141 ggccggttca cctcggccac cacctgcgcc atggtgaacg tcttgccgga gccggtgacg
     1201 ccgagcagca cctggtgcgg atcgccgcgc cgcagcccgt cgacgagctc gggcaccgcg
     1261 tgcacctgat cgccgcgcac ggtgaagtcg ctgaccagct tgaatcgttc ttccgtcgtg
     1321 ggcatatacg gcacggcccg tcggggtcgg gccaatcccg aatcttacag cgaggctccg
     1381 ccacatacaa aagagtggct ccgcctcgct gtatcgttgt ctattttggc gccaggcagg
     1441 tgtgcgtccg tggcggcgct atttcacgaa gggggcgaag tagcccttgc gcgtgaggac
     1501 gcggaggtcg cgggtgcgcg cggtgcgcgc caccttcacc tcgacgcggc gccaccgccc
     1561 gtcgcgggcg gtgttggagg acgtgtagcc gagcgtgtat tgcgcgcgga tgccggccac
     1621 cacccggtcg taggcgctct cgatctcctt catggacagc gggaagatgg cttccccgcc
     1681 cgtctcctcg gccatctgcg tcaggcgcac gcgctgctcg gtgcgaaccg acgagggctg
     1741 gtgctcgaga aagcccaccg agtacaccgt cacgtcggtg gcgcgcagca ggtccatgac
     1801 gtccttgaac gggatcgagc tgcgggtatc gccgccgtcg gtgaagatga ccagcaccgt
     1861 ccggccgtcg gcctcggcag cgccatcgag gtagacgccg agcgcgtcgt agagcgccgt
     1921 cgcgttgccc agctgctttc gcgaccggat gcgctccacc atgcgcggga aatcctgctg
     1981 ggtgtagcgg gtgacgcgca cctcggtgtc gaagtccacc agcgtcatgt ccacggcgtc
     2041 gctgaccgtg ttgaggaacc gcacggccgc cttgcgcgcc agctcgatgt cggcgcccat
     2101 gctgctgctc gtgtcgagca gcagccccac gtgggtttcg acggcgccgt tctcctggtc
     2161 gccccgcgcg aagtaggtga tggtctgcgc gcggccgtcc tcggtcaccg tgaagtcggc
     2221 ctggtccaga tccctgatgg ggccgccggt gcgatcccgc accgtgacac ccaccgtcac
     2281 caggtcggtt tcggcgcgaa ataccggctg ctgcgcggca aacacacctg cggcc
//
LOCUS       DASSYW010000443         2193 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1288027, whole genome shotgun sequence.
ACCESSION   DASSYW010000443 DASSYW010000000
VERSION     DASSYW010000443.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2193)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2193)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2193
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1288027"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..213
                     /locus_tag="VFN38_07075"
     CDS             <1..213
                     /locus_tag="VFN38_07075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011562.1"
                     /translation="PLGHRAIGCRHRSDLRQHGARIVGLCTARASGLLLADVLAHRGA
                     FLRREYARRFAGCSGALGGSLGGLVR"
     gene            complement(242..1090)
                     /locus_tag="VFN38_07080"
     CDS             complement(242..1090)
                     /locus_tag="VFN38_07080"
                     /inference="COORDINATES: protein motif:HMM:NF025053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase 2C domain-containing
                     protein"
                     /protein_id="HET9011563.1"
                     /translation="MIDTDTAVALDAFGLTDRGLVRDGNEDHFLIARVNKSIDVRQTS
                     LPSAAVTHEFGNAPGGYLLAVADGVGGRPEGEQASERTLSAMLSYMGRAASCFQSLET
                     SEEHDLLEKLEEVVRGVHAALLAEYGGVTSKLPATTLTLVLLAWPRAYHVQVGDSRAY
                     VRRGGRLQRLTRDQNLGEFMVSLGAWTDEQARMASTAETLSSAIGGSELEPVVGLIDL
                     APGDSLLLCTDGLTKHVSDDEIARALAQSESAEATSRKLLSDALAAGGTDNVTVLVLR
                     TTPAAG"
     gene            complement(1087..1599)
                     /locus_tag="VFN38_07085"
     CDS             complement(1087..1599)
                     /locus_tag="VFN38_07085"
                     /inference="COORDINATES: protein motif:HMM:NF012255.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rab family GTPase"
                     /protein_id="HET9011564.1"
                     /translation="MLQKKICMVGMFGTGKTCLVQRYVHSLFSVKYLTTVGVKIDRRE
                     VQASGQPVMLMLWDLEGRDEVRNINPSYLKGAHGVLYVVYGTRRDTFDKLFEIRDLVT
                     KTVGAVPSVVALNKSDLMDQWQLANADDKRLATEGLFALRTSAKSGANVEAAFQHLAD
                     ATTAPTGAPR"
     gene            complement(1599..>2193)
                     /locus_tag="VFN38_07090"
     CDS             complement(1599..>2193)
                     /locus_tag="VFN38_07090"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HET9011565.1"
                     /translation="VVARARQTLAAPASATTALVGDTLRVAGSAMVDWLRRLRVAPPI
                     GGVAHLDYSTVKATLPARIGDLRRRVEATRVLFDPGSARVTDAEAAKVRALAESMRRL
                     ADSAAAIDASVRVDLVGRTDPTGTDATNQSLANLRVDAVIRRLRESGVPGAMLNGRPV
                     ATAQPLPAADAAEQARINRSVSFEPVVFIGSQAPRGP"
BASE COUNT          296 a          789 c          739 g          369 t
ORIGIN      
        1 ccgctcggcc atcgcgcgat cggctgccgg catcgcagcg atcttcgcca gcacggcgct
       61 cgtatcgtcg gcctttgtac cgcccgcgcg agcggccttc tgctcgcgga cgtgctcgcg
      121 catcgcggcg cgttcctccg ccgtgaatac gctcgacgat tcgccggttg cagcggtgcg
      181 cttggcggtt cgctgggtgg tcttgttcgc tgatttcttt gctgccatgt gtcttcgcct
      241 gctagcccgc cgcgggcgtc gtgcgcagca ccagcaccgt gacgttgtcg gtgccgcccg
      301 cggcgagcgc atcgctcagc aacttccggc tcgtcgcctc cgccgactcc gattgcgcca
      361 gcgcacgcgc gatctcgtcg tccgagacgt gcttggtgag gccgtcggtg cagagcagca
      421 ggctgtcacc gggcgcgaga tcgatcagcc ccacgaccgg ctccaactcg ctcccaccga
      481 tcgcgctcga cagcgtctcc gccgtcgagg ccatgcgcgc ctgctcgtcg gtccacgcgc
      541 cgagcgacac catgaactcg ccgaggttct ggtcgcgcgt gagccgctgc agtcgtccgc
      601 cgcgccgaac gtaggctcgg ctgtccccca cctgcacgtg gtaggcacgc ggccacgcga
      661 gcagcaccag cgtcagcgtc gtcgcgggaa gcttggacgt gacgccgcca tactcggcga
      721 gcagcgcggc gtgcaccccg cgcaccactt cctcgagctt ctcgaggagg tcgtgctcct
      781 cgctcgtctc cagcgactgg aagcacgagg cggcccgccc catgtacgac agcatcgctg
      841 agagcgtgcg ctcgctggcc tgttccccct ccggacggcc gccgacgccg tcggccacgg
      901 cgagcaggta gccgcccggc gcgttcccga actcgtgcgt gaccgcggcc gacgggaggc
      961 tcgtctgccg cacgtcgatc gacttgttca cgcgcgcgat caggaagtga tcctcgtttc
     1021 cgtcgcgtac gagcccgcga tcggtcagac cgaaggcatc cagcgcgacg gcggtgtcgg
     1081 tgtcgatcat cggggtgctc cggtgggcgc ggtggtggcg tcggcgagat gctggaaggc
     1141 cgcttcgacg ttggcgccgc tcttggcgct ggtgcggagc gcgaacagcc cctcggtcgc
     1201 cagtcgcttg tcgtccgcgt tggcgagctg ccactgatcc atgaggtcgg acttgttcag
     1261 cgccacgacg ctcggcacgg cgccgacggt cttcgtcacc agatcgcgaa tctcgaacag
     1321 cttgtcgaac gtgtcgcgcc gggtgccgta cacgacgtag agcacgccgt gcgcgccctt
     1381 gaggtagctc ggattgatgt tccgcacctc gtcgcgcccc tcgaggtccc acagcatgag
     1441 catcaccggc tggccgctcg cctgcacctc gcgccggtcg atcttgaccc ccaccgtggt
     1501 gaggtatttg accgagaaca acgagtggac gtagcgctgc acgagacagg tcttcccggt
     1561 cccgaacatg ccgaccatgc agatcttctt ctgcagcatc acggccccct gggtgcttgc
     1621 gatccgatga ataccaccgg ctcgaacgag acgcttcgat tgatgcgcgc ctgctccgcg
     1681 gcgtcggcgg ccgggagtgg ctgtgccgtc gccacgggtc gaccattgag catcgcgccc
     1741 gggacacccg attcgcgcag gcgccggatg accgcgtcga ctctcaggtt cgcgagcgac
     1801 tgattggtcg cgtccgttcc ggtgggatcg gtgcggccga cgaggtccac gcgcaccgag
     1861 gcgtcgatcg ccgccgcgct gtcggccagc cggcgcatcg actccgccag tgcacgcacc
     1921 ttcgccgctt cggcgtcggt cacgcgcgcc gagccggggt cgaacaggac gcgtgtcgcc
     1981 tcgacgcggc ggcgcaggtc accgattcgc gccggcagcg tcgccttgac ggtcgagtag
     2041 tcgagatgcg cgacgccacc gatgggcgga gcgacgcgga gtcgccgcag ccaatcgacc
     2101 atcgcactgc cggcgacgcg cagcgtgtcg ccgacgagcg cggtcgtcgc cgaggctggc
     2161 gctgcgagcg tctggcgcgc ccgcgcgacg acc
//
LOCUS       DASSYW010000444         2787 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_147458, whole genome shotgun sequence.
ACCESSION   DASSYW010000444 DASSYW010000000
VERSION     DASSYW010000444.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2787)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2787)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2787
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_147458"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..333)
                     /locus_tag="VFN38_07095"
     CDS             complement(<1..333)
                     /locus_tag="VFN38_07095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011566.1"
                     /translation="MRAPARLLLALLAATPLALPAALPAQDTARTAIARDLERLAASE
                     SIAGLPPADSVTRGPRTVPAGTTVRGAVVARGPVLVAGRVEGTVVSLAGDVDVARGGV
                     ITGDAIAVG"
     gene            complement(335..919)
                     /locus_tag="VFN38_07100"
     CDS             complement(335..919)
                     /locus_tag="VFN38_07100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011567.1"
                     /translation="MNHRHLLPNEIDLLVDGEAGFGVAPLRAHILECRDCRERLDEAR
                     VVVDALECLPHFAPDSRLADRVMAQVPVFVPAHVAARDSVRRWLPQSAAARGAALAAG
                     TTVAGALTLAMIWLATRGDAVLFMSGLLGERIRGAVVVGARELVLALLGESALTALQA
                     TGAVGASLVLFGFLLTAVGTVAGIRRLATAGRRA"
     gene            complement(987..1589)
                     /locus_tag="VFN38_07105"
     CDS             complement(987..1589)
                     /locus_tag="VFN38_07105"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HET9011568.1"
                     /translation="MLRTLDLANLPDADVVALALEGREAAHRELIKRYERPVFSLVFR
                     MVRDRELAEDLTQDTFVKVLSHLDRYRADFKFSSWLFKIANNVAIDHLRRRQLDTVSM
                     DGSPHAVSAEAVESTRFDVADTTENALDEMEARELGSAIERAIARLRPEYRSCIMLRH
                     VEGRSYEEIASTLDLPLGTVKTYIHRARHELRRALEHTRE"
     gene            1719..2468
                     /locus_tag="VFN38_07110"
     CDS             1719..2468
                     /locus_tag="VFN38_07110"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone/menaquinone biosynthesis
                     methyltransferase"
                     /protein_id="HET9011569.1"
                     /translation="MHEPGVEERRAEAAAEGGAEKRAYVRTVFEQIAPRYDLLNHLLS
                     FNVDRLWRRRALRALGWTRAPEGRYLDVCAGTLDVGVQLSRQRGFRGFIVGADFAVPM
                     LRAGIGKASASVLAPVAADAQQLPLRDGSMDGATVAFGIRNVASLDAALREVHRVLAP
                     GATFVILEFTTPRWRLVRLLYHFYFHRLLPFIGGVVSGHRTAYRYLPQSVAHFPAEPE
                     LARRMTAAGFDDVRWTSLSLGIAAIHSGRRR"
     gene            2465..>2787
                     /locus_tag="VFN38_07115"
     CDS             2465..>2787
                     /locus_tag="VFN38_07115"
                     /inference="COORDINATES: protein motif:HMM:NF024258.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase family protein"
                     /protein_id="HET9011570.1"
                     /translation="MTAAGARLVGLISDTHGLVRARVHEALAGVELILHAGDVGGDEV
                     LDELQLIAPVLAVYGNTDAPGQPRLAESIERTIGGVSIHVSHGHEVGSPTPARLLARY
                     EAQVIV"
BASE COUNT          372 a          957 c         1091 g          367 t
ORIGIN      
        1 ccccacggcg atggcatcgc cggtaatcac gccgccgcga gcgacgtcga cgtcaccggc
       61 caggctcacg acggtgccct ccacgcggcc ggcgacgagg acgggtcccc gcgcgaccac
      121 cgcgccgcgc accgtggtgc cggcggggac ggtgcggggg ccgcgggtga cgctgtcggc
      181 ggggggcagg ccagcgatgg actcgctcgc ggcgaggcgc tccaggtcgc gcgcgatcgc
      241 cgtgcgcgcg gtgtcctgcg cgggcagggc ggcgggcagg gcgaggggcg tggcggcgag
      301 gagcgcgagc aggaggcggg cgggcgcgcg catcctacgc gcgccgcccg gccgtggcca
      361 gccgccggat tcccgccacc gtcccgacgg cggtgagcag gaagccgaag agtacgaggg
      421 aggcacccac cgccccggtc gcctggaggg cggtcagcgc cgattcgccc agcagggcga
      481 gcacgagctc ccgggcgccc accaccaccg cgccgcggat ccgctcgccc agcagcccgc
      541 tcatgaagag cacggcgtcg ccacgggtgg cgagccagat catggccagg gtgagggcgc
      601 cggccaccgt ggtgcccgcc gcgagggcgg cgccacgcgc cgccgccgac tgcgggagcc
      661 agcggcgcac cgagtcccgg gccgccacgt gggcgggcac gaacacgggc acctgagcca
      721 tcacccggtc ggccaggcgg gagtccgggg cgaaatgggg caggcactcc agcgcgtcca
      781 cgacgacgcg cgcttcgtcg aggcgctcgc gacagtcgcg gcactcgagg atgtgcgcac
      841 gcagcggggc gacgccgaac ccggcttcgc cgtcgaccag caggtcgatc tcgttgggga
      901 gcaggtgtct gtgattcatg gtctcgtacc cttgtacggg ccggggagga ccggggtttc
      961 acccccgatc ggggtcgatt cgggggtcat tcgcgggtgt gctccagcgc acggcgaagc
     1021 tcgtgccgcg cgcgatggat ataggtcttg accgttccca gggggaggtc cagggtggag
     1081 gcgatctcct cgtaggagcg gccctcgacg tgccgcagca tgatgcacga acggtactcg
     1141 gggcggagcc gggcgatggc ccgctcgatg gccgaaccga gctcccgggc ctccatctcg
     1201 tccagggcgt tctcggtggt gtcggccacg tcgaaccggg tggactcgac cgcctcggcc
     1261 gagacggcgt ggggcgagcc gtccatgctc acggtgtcga gctggcgccg gcgcaggtga
     1321 tcgatcgcca cgttgttggc gatcttgaac agccacgacg agaacttgaa gtccgcgcgg
     1381 tagcggtcga ggtgcgagag caccttcacg aaggtgtcct gcgtgaggtc ctcggccagc
     1441 tcgcgatcgc gcaccatgcg gaagacgagc gagaagaccg gccgctcgta tcgcttgatc
     1501 agctcccgat gcgccgcctc gcgcccctcg agagcgaggg cgacgacgtc ggcatcggga
     1561 aggttcgcga ggtcgagggt tcggagcaca gcggggtggc ggggccgccg cgaggatgcg
     1621 accaggtggg gtgcgcggct cgggaaaagt acgcgtcgcc actcgtgcaa tccagccgcg
     1681 cgcttgcctg gcctttcgcc gccggcgagg tttcacggat gcacgagcca ggggtcgagg
     1741 agcgccgcgc cgaggcggcg gcggaggggg gggcggagaa gcgcgcgtac gtgcgcaccg
     1801 tgttcgagca gatcgcgccg cggtacgatc tgctgaatca cctgctcagc ttcaacgtcg
     1861 accggctgtg gcggcgccgc gccctgcggg cgctcgggtg gacgcgcgcg ccggaggggc
     1921 gctatctcga cgtctgcgcg ggcacgctcg acgtgggcgt gcagctctcg cggcagcgcg
     1981 gcttccgcgg cttcatcgtc ggcgcggact tcgccgtgcc gatgctgcgc gccggcatcg
     2041 ggaaggcgtc cgcgagcgtg ctcgcgccgg tcgcggccga tgcgcagcag ctgccgctgc
     2101 gcgacgggag catggacggc gcgacggtgg cgttcgggat tcgcaacgtc gcgtcgctgg
     2161 acgccgcgct gcgcgaggtg caccgcgtgc tcgcgccggg cgcgacgttc gtcatcctcg
     2221 agttcacgac gccccggtgg cggctcgtgc gcctgctgta ccacttctac ttccaccggc
     2281 tgctgccctt catcggcggc gtggtgagcg gtcatcgcac cgcctaccgc tatctcccgc
     2341 aatcggtggc gcactttccc gccgagcccg agctggcgcg gcgcatgacg gcggcggggt
     2401 tcgacgacgt gcgctggacc tcgctgtcgc tggggatcgc cgcgatccac tcgggacgcc
     2461 ggcgatgacc gcggcgggcg cgcggctggt cggactgatc tccgacaccc acggcctggt
     2521 gcgcgcgcgc gtccacgagg cgctggcggg ggtggagctg atcctccacg ccggcgacgt
     2581 ggggggcgac gaggtgctcg acgagctgca gctcatcgcg ccggtgctcg cggtgtacgg
     2641 caacaccgac gcgccgggcc agccgcggct cgccgagtcg atcgagcgca ccatcggcgg
     2701 ggtgtcgatc cacgtgagcc acggccacga ggtggggagc cccacgccgg cgcggctgct
     2761 cgcgcgctac gaggcgcagg tgatcgt
//
LOCUS       DASSYW010000445         3695 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1292204, whole genome shotgun sequence.
ACCESSION   DASSYW010000445 DASSYW010000000
VERSION     DASSYW010000445.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3695)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3695)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3695
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1292204"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..616
                     /locus_tag="VFN38_07120"
     CDS             <1..616
                     /locus_tag="VFN38_07120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011571.1"
                     /translation="EGHYKLTRRTLEALIEFRSPAGVITKGPMIVRDKLLLAKLCEID
                     GSSVVVSVPCSDDAVTARLEPGTAPPRQRLRAVRELLDAGVNAGVLMSPIVPGISSKP
                     RLIEKTVKDAAAAGVPIVGSNVMHLQGGTREHFTAWLSREFPHLVAGYRDLYKKDYAP
                     ASYCTEVKKVVKAARTKHGPDSRDIRAARSGSGRPADIAGSTKV"
     gene            complement(613..2904)
                     /locus_tag="VFN38_07125"
     CDS             complement(613..2904)
                     /locus_tag="VFN38_07125"
                     /inference="COORDINATES: protein motif:HMM:NF019344.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit"
                     /protein_id="HET9011572.1"
                     /translation="MDDFDIAQSKIGESAQRVVDRAVDETRRREHGEVTSEHLFLAFA
                     QLEWDTFSEVMRDLSLNPHEIVQALEDHLHSLLGGDVRKPRVAAAAKDVMKMAFHHAS
                     RAGRQTIESSDLFVALFEESRGASASVPVAIIRQHGVEPDALVSKIATRMRDHELREE
                     QFRKRFELPPFLRNFATNLNLLARQDRIPPVFGRDPEIQQVLEILSHRERSNSVMLVG
                     EPGVGKTAIVEGLARRIEFEPDTIPARLRDCQIVNLQMNSIVAGTMLRGMFEDRLHNV
                     IREVKERPNLVLFIDEAHTMVGAGSAIGAPADAANIFKSVLSRGEVRIIGATTRGEYK
                     EYIQEDEALARRFRTVNVPEPTIEETRRILNNLKPRLERLYSVRMLDEAIDAALDLSP
                     RYERHLRLPDKVIGWLDTASVRTEIDKRWEVTAADVVDVVSHTTGIPKDMVFRDVGDR
                     LKGIEQQLGKRVIGQEKAVEAVARRLTLNKGPLKDGFDRPDGVLLFLGPTGVGKTELA
                     KACAEFLFGDEKKMIRIDMSEYQDGGLSVDKLIGMPRGIVGSERGGILTNQLRDNPCS
                     VVLLDEVEKASPTLLNLFLQAFDEGWLTDGRGKRVYLSDAIVIMTSNAGSEHFRKLEN
                     SLGFRSGQVATTQVQNEIHRELERRFSPEFRNRIDQVVVFDPLTQDQVRAITEKYLEE
                     VTATLRKSEKCLVVEPGVVDALVTEGYSMANGARFLKRVIDDRIKLPLSQKWKEASSF
                     RATLEDGVIVVQPVAQRLHKRSA"
     gene            3323..3679
                     /locus_tag="VFN38_07130"
     CDS             3323..3679
                     /locus_tag="VFN38_07130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011573.1"
                     /translation="MYFPVYPTAQFLAAYDAGRSQRYLLYGTTATFAELVAWYRVQLN
                     DKGDQVFREPPTHVFEVGRFREETMAFPPGVTVKDWTWGGSQGYPNPKPGAQPARYPT
                     IIMIVPPPPAATPAKK"
BASE COUNT          600 a         1272 c         1191 g          632 t
ORIGIN      
        1 cgaggggcac tacaagctca cgcggcgcac gctcgaggcg ttgatcgagt ttcgcagccc
       61 ggccggcgtc atcaccaagg ggccgatgat cgtccgcgac aaattactgc tcgccaagct
      121 gtgcgagatc gacggctcga gcgtggtggt gagcgtgccg tgcagcgacg acgccgtgac
      181 ggcacgcctc gagcccggaa cggcgccgcc gcggcagcgc ctgcgcgccg tgcgcgagct
      241 gctcgacgcg ggcgtcaacg ccggcgtgct catgagcccg atcgtgcccg gcatctcgtc
      301 gaagccgagg ctgatcgaga agacggtcaa ggacgccgcg gccgccggcg tcccgatcgt
      361 gggctcgaac gtcatgcacc tgcagggcgg tacgcgtgag cacttcacgg catggctgtc
      421 gcgcgagttc cctcacctgg tggcgggcta ccgggacttg tacaagaagg actacgcgcc
      481 ggcctcgtat tgcaccgagg tcaagaaggt ggtgaaagcc gcccgtacaa agcacggacc
      541 ggactctcgc gatatccgag cagcccggtc cggttctggt cgccccgcag atatcgcggg
      601 atctaccaaa gtctaggcac ttcgcttgtg cagccgctgt gcgaccggct gcaccacgat
      661 gacaccgtcc tccagcgtgg cgcggaagct cgaggcctcc ttccacttct ggctcaaggg
      721 cagcttgatg cggtcgtcga tcacgcgctt caggaagcgc gcgccgttgg ccatgctgta
      781 gccctcggtc acgagcgcgt ccacgacgcc cggctccacc accaggcact tttcggactt
      841 ccgcagcgtg gcggtcactt cctcgagata cttctcggtg atcgcgcgca cctgatcctg
      901 cgtcagcgga tcgaacacca ccacctggtc gatgcggttg cggaactccg ggctgaagcg
      961 gcgctccagc tcgcggtgaa tctcgttctg cacctgcgtc gtcgccacct ggcccgaacg
     1021 gaacccgaga ctgttttcca gcttgcggaa gtgctcggag ccggcgttcg acgtcatgat
     1081 gacgatcgcg tccgacagat acacgcgctt gccgcgcccg tcggtgagcc agccttcgtc
     1141 gaacgcctgc aggaacaggt tcaacagcgt cgggctcgcc ttctcgacct cgtcgagcag
     1201 caccaccgag cacgggttgt cgcgcagctg gttcgtgagg atgccgccgc gctcgctgcc
     1261 gacgatgccg cgcggcatgc caatcagctt gtccaccgac agtccaccgt cctgatactc
     1321 ggacatgtcg atgcggatca tcttcttctc gtcgccgaac aggaactcgg cgcacgcctt
     1381 ggccagctcg gtcttgccga ccccggtcgg gccgaggaac agcagcacgc cgtcgggacg
     1441 atcgaagccg tccttcagcg gacccttgtt cagcgtcaga cgcctcgcca cggcttcgac
     1501 ggccttctcc tggccgatca cgcgcttgcc gagctgctgc tcgatcccct tcaggcggtc
     1561 gcccacatcg cggaagacca tgtccttggg gatgccggtg gtgtgcgaca cgacgtccac
     1621 gacgtcggcc gcggtcactt cccagcgctt gtcgatctcg gtccgcaccg acgccgtgtc
     1681 gagccagccg atcaccttgt cgggcaggcg gagatgccgc tcgtagcgcg gcgacaggtc
     1741 gagcgcggcg tcgatcgcct cgtcgagcat gcgcacggaa tacagacgct cgagccgcgg
     1801 cttgaggttg ttgaggatcc gcctggtctc ctcgatggtc ggctccggca cgttcaccgt
     1861 gcggaagcgg cgcgccagcg cctcgtcttc ctggatgtat tccttgtact cgccgcgggt
     1921 cgtggcgccg atgatgcgga cttcgccgcg cgacagcacc gacttgaaga tgttggcggc
     1981 gtccgccggg gcgccgatcg ccgagcccgc gcccaccatc gtgtgcgcct cgtcgatgaa
     2041 caggaccagg ttcggccgct ccttcacctc gcggatgacg ttgtggaggc ggtcctcgaa
     2101 catgccgcgc agcatggtgc cggcgacgat gctgttcatc tgcaggttga cgatctgaca
     2161 gtcgcgcagc cgcgcgggaa tcgtgtcagg ttcgaactcg atgcgccgcg ccagcccttc
     2221 gacgatggca gtcttgccga cgccgggctc accgaccagc atcacggagt tcgaccgttc
     2281 gcggtgcgag agaatctcga gcacctgctg aatctcggga tcgcgtccga agacgggcgg
     2341 aatcctgtcc tgccgcgcga gcaggttcag gttggtcgcg aagttgcgca ggaacggcgg
     2401 cagctcgaag cgcttccgga actgctcctc gcggagctcg tggtcgcgca tgcgcgtggc
     2461 gatcttcgac acgagcgcgt ccggctcgac gccgtgctgg cggatgatgg ccaccggcac
     2521 cgacgccgac gcaccgcggc tctcttcgaa cagggcgacg aacaggtccg acgactcgat
     2581 cgtctggcgg ccggctcggc tcgcgtgatg aaacgccatc ttcatcacgt ccttcgccgc
     2641 ggcagccaca cgcggcttcc gcacgtcgcc gccaagaagg ctgtgcaggt gatcttcgag
     2701 cgcctgtacg atctcgtgcg ggttcaggct gaggtctcgc ataacctcgg agaaggtgtc
     2761 ccactccagc tgagcgaacg cgagaaacag gtgctcgctc gtcacctcac catgctctcg
     2821 gcgacgggtt tcatcgaccg cgcggtcaac gacccgctgg gcggattcgc ctatcttgct
     2881 ttgagcgatg tcaaagtcgt ccacgacgtc atcgcctcct ggaccctaac ggctgagggg
     2941 cctgccaggg ttcagagcaa gagacaggcc agaaccgagg ggggtgacgg tgcccagatc
     3001 aggggacatg ctcttgcacg aggtgccaaa actcgtccct gggccaaccc tggattcgag
     3061 ggctcgtata atggcgtgaa tgccgcgttg ggtgggttct ttggggctcg tcctgggatt
     3121 gtggacggtg gccgccgccg cccagacccc gcaacccttc ccccgcccag gcgaaacccg
     3181 gactcaggca cctgcggcta gaccggcggc gccagccccg accgccactg cgccgacacc
     3241 tgccgccgga caattggcgc ctgctgtcgc ccagtcggca ccagccgcac cctcggatcc
     3301 agccgctccg cgccccgacg aggtgtattt cccggtctac ccgacggcgc agttcctggc
     3361 cgcgtacgac gcaggacgca gtcagcggta cctgctatac ggcaccaccg ccaccttcgc
     3421 ggagctcgtg gcctggtacc gcgtccagtt gaacgacaag ggcgatcagg tgttccgcga
     3481 gccgccgacg cacgtgttcg aggtcggccg cttccgcgaa gagacgatgg cgttcccgcc
     3541 cggcgtcacg gtgaaggact ggacgtgggg cggatcgcag ggctatccga atccgaagcc
     3601 gggcgcgcag cccgcgcgct atccgacgat catcatgatc gtcccgccgc cgcccgccgc
     3661 aactcccgcg aagaagtaac tcacctgtcc gcgcc
//
LOCUS       DASSYW010000446         3070 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1568979, whole genome shotgun sequence.
ACCESSION   DASSYW010000446 DASSYW010000000
VERSION     DASSYW010000446.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3070)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3070)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3070
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1568979"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(14..289)
                     /locus_tag="VFN38_07135"
     CDS             complement(14..289)
                     /locus_tag="VFN38_07135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011574.1"
                     /translation="MSTQLLVSVTLAGVGVIALGIAVGYERAMQRHRQPGITYSQVTL
                     RRDGGWRRADLFTDTGLRYQRRASTFGLTGAVLLLASLLAYVLLARR"
     gene            complement(464..2068)
                     /locus_tag="VFN38_07140"
     CDS             complement(464..2068)
                     /locus_tag="VFN38_07140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HET9011575.1"
                     /translation="MATPFRDVAAQSFPTDDPVLKRIWAIGMDSSHTTELAGALLDSI
                     GPRLAGSPGQKSAQNWLVKTYTSWGIDAKNERYGTWRGWRRGHSHVDLVSPRVRTLEA
                     TMVGYSPGTGGKDVTASTIVLPRFADSTEFVRWLPQAKGKLVLVSAPQPTCRPTADWT
                     EFGTAASRARMDSLRTKVAQEWSNPNVRGTGYSLALAGGGLGKRLDEAGVAGVITSRP
                     TNAVGTRSIFETYNTASPTLSVSCEDYGLVFRLTEHGSNPRIRMNLDAEQLGEQPMSN
                     TIATVKGSEKPNEYVMLSAHFDSWDGGSGATDNGTGTITMLEAMRILRQVYPNPKRTI
                     VAGHWTGEENGLVGSKAFREDHPEIVKGLQALFNQDNGTGRIVRMDASGLVDGDVHLR
                     SYLAKLPTEFQQQITYGGPGVPSGGGSDNASWACAGLPGFSLGSLGWNYGNETWHTER
                     DTYDKIVFDDLKANATLAAMLVYLASEDSTIIGRERVDIVKAVAEQRARFIAANPNGA
                     RIAGQDGPPTWPECGVAPRKTNPRLK"
     gene            2256..>3070
                     /locus_tag="VFN38_07145"
     CDS             2256..>3070
                     /locus_tag="VFN38_07145"
                     /inference="COORDINATES: protein motif:HMM:NF025719.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase dimerization/phospho-acceptor
                     domain-containing protein"
                     /protein_id="HET9011576.1"
                     /translation="MATSRSTPYADNTGTPRLATVLAGELRAARTEVVRRWLDRIVAR
                     VQIDQNAVFPTDELLDHVPLLVDGIAAYLESCGVSVDEQLSVEAKAMELGALRHAQGF
                     DAYQILKEHEILAGIIFAFMGESLARVNPADAPAADVALVWRRAAEAIDEVRQATMTH
                     FLRVSAEQVRQREERLRRFNRMVSHELKNRVGAIRGASALLAEPWLEPSQRERFLRII
                     AQNGEGLQRVLENLTALSRLEGESRQHRNVLLPAAAAEVVRQLRDAAKLGNVQV"
BASE COUNT          451 a         1040 c         1083 g          496 t
ORIGIN      
        1 atggcgcgcc acgtcaacgt ctggcgagga gcacatacgc caggagcgac gccagcaaca
       61 gtacggcgcc cgtgagaccg aacgtggagg cgcggcgttg atatcgaagc ccggtgtcgg
      121 tgaagaggtc ggcccggcgc cagccgccgt ctcttcgcag cgtcacctgc gagtacgtga
      181 tgccaggctg ccggtggcgc tgcattgcgc gctcgtaccc gacggcgatg ccgagcgcga
      241 tgacgccgac tccggcgagg gtgacactga cgagcagttg ggtggacacg ggatcagcgc
      301 tagccacggt gcctgcgcgg gtgatgggtg agggacgaat cggcggcaca tgactcgtcc
      361 cggcaaactc ggcgctggtg gatcgggcgc atgactgtcg gatcgcggtg ctgaaagggg
      421 agcgctctcg cgctcccctt tcggccttca cgaatccgcg gtcctacttg agccgcggat
      481 tcgtcttcct cggcgccact ccgcactccg gccacgtggg cggaccatcc tgtcccgcga
      541 tccgcgcgcc gttcgggttg gcggcgatga agcgtgcccg ctgctccgcc accgccttca
      601 cgatgtccac ccgctcacgg ccaataatcg tcgaatcttc gctggccaga tagacgagca
      661 tcgccgccag cgtcgcattc gccttcaggt cgtcgaacac gatcttgtcg tacgtgtcgc
      721 gctccgtgtg ccaggtctcg ttgccgtagt tccaacccag cgagccgagt gagaagccgg
      781 ggaggccagc gcaggcccac gacgcattgt cgctgccgcc accgctcggc acaccggggc
      841 cgccgtaggt gatctgctgc tggaactccg tcgggagctt cgcgagatag ctccgcagat
      901 ggacgtcgcc gtccacgagg ccgctcgcat ccatgcgcac gatgcgcccg gtgccgttgt
      961 cctggttgaa cagcgcctgc agtcccttca cgatctcggg atgatcctcg cggaaggcct
     1021 tcgagccgac gaggccattc tcctcacccg tccagtgccc cgccacgatc gtgcgcttgg
     1081 ggttcggata cacctgacgc aggatacgca tcgcctcgag catcgtgatc gtgccggtgc
     1141 cgttgtccgt cgcgcccgag ccgccgtccc acgagtcgaa gtgcgcggag agcatcacgt
     1201 attcgttcgg cttctcgctc cccttcaccg tcgcgatcgt gttcgacatc ggctgctcgc
     1261 cgagctgctc ggcgtcgagg ttcatgcgga tcctggggtt gctgccgtgc tccgtgagcc
     1321 ggaagacgag cccgtagtcc tcgcacgaga cgctcagcgt gggcgacgcg gtgttgtacg
     1381 tctcgaagat cgagcgcgta cccacggcgt tggtgggacg cgaggtgatc acgccggcga
     1441 cgcccgcttc gtcgagccgc ttgcccaatc cgccgccggc gagcgccagg ctgtagccgg
     1501 tgccccgcac gttcgggttg ctccactcct gcgcgacctt cgtgcgcaga ctgtccatcc
     1561 gcgcgcgcga cgccgcggtc ccgaactcgg tccagtcggc ggtgggacga caggtgggct
     1621 gcggggcgct cacgagcacg agcttcccct tcgcctgcgg cagccagcgc acgaactcgg
     1681 tgctgtcggc gaagcgcggc agcacgatcg tgctggcggt gacgtccttg ccgccggtgc
     1741 cggggctgta gcccaccatc gtcgcctcga gggtgcgcac gcgcgggctc acgaggtcca
     1801 cgtgcgaatg gccacgacgc cagccacgcc aggtgccgta gcgctcgttc ttcgcgtcga
     1861 tcccccagct cgtgtacgtc ttcacgagcc agttctgcgc gctcttctgc ccgggcgagc
     1921 cggcgaggcg cgggccgatg gagtcgagca gcgcgccggc gagctccgtc gtgtgcgagc
     1981 tgtccatgcc gatcgcccag atgcgcttga gcaccgggtc gtcggtcggg aagctctgcg
     2041 cggcgacgtc gcggaacgga gtggccatca aaagggttac agcgacggca gcgggaaggc
     2101 gtcgaatcat cggcgtggcg gtgagggtgg cgcgggtctc tgtcccgcac ccagagatac
     2161 ggcacggagg ggcgggacgc tggcggggtc tattctcccg gcgggcacta ctctatagta
     2221 ggcgcaggat cacacccggg gcaggaagga caccgatggc taccagccgt tccacgccgt
     2281 atgccgacaa cacggggacg ccgcgcctcg ccaccgtgct cgcgggcgag ctgcgcgcgg
     2341 cgcggacgga ggtggtgcgc cgctggctcg accgcatcgt cgcgcgcgtg cagatcgacc
     2401 agaacgccgt cttcccgacg gacgagctgc tcgaccacgt gcccctgctc gtggacggca
     2461 tcgcggccta cctggagtcg tgcggcgtgt cggtggacga gcagctcagc gtggaggcga
     2521 aggcgatgga gctcggcgcc cttcgtcacg cgcaggggtt cgacgcctac cagatcctga
     2581 aggagcacga gatcctcgcc gggatcatct tcgccttcat gggcgagtcg ctggcgcgcg
     2641 tcaatccggc ggatgccccg gcggccgacg tggcgctcgt gtggcggcgg gccgccgagg
     2701 cgatcgacga ggtacgtcag gcgacgatga cgcacttcct gcgcgtctcg gccgagcagg
     2761 tgcggcagcg cgaggagcgg ctgcgccggt tcaaccgcat ggtgtcgcac gagctgaaga
     2821 accgcgtcgg cgcgatccgc ggcgcgtccg cgctgctcgc cgagccgtgg ctggagccga
     2881 gccagcgcga gcgcttcctg cgcatcatcg cgcagaatgg tgaggggctg cagcgcgtgc
     2941 tcgagaacct cacggcgctc tcgcggctcg agggagagtc gcgccagcat cgcaacgtgc
     3001 tgctccccgc ggcggcggcc gaggtggtgc ggcagctgcg cgacgcggcg aagctcggca
     3061 acgtgcaggt
//
LOCUS       DASSYW010000447         4113 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_536247, whole genome shotgun sequence.
ACCESSION   DASSYW010000447 DASSYW010000000
VERSION     DASSYW010000447.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4113)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4113)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4113
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_536247"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..733)
                     /locus_tag="VFN38_07150"
     CDS             complement(<1..733)
                     /locus_tag="VFN38_07150"
                     /inference="COORDINATES: protein motif:HMM:TIGR00654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhzF family phenazine biosynthesis protein"
                     /protein_id="HET9011577.1"
                     /translation="MSFHYYLTDVFTDRPFGGNQLAVFPDAGDIPEQLLLPIAREFNF
                     SEVTFVYPAADARNTRRVRIFTPGGEIPFAGHPTVGTAFVLFASGELRADCREVTIVL
                     EEGVGAVPVVVRFPESGGLTPEFGQLSVAKLPEVVPPSPRIATLAEALSLDAGDFLGG
                     DYEPEAVSCGIPFLIVPLRSRDAVRRARVRLDVWERSLKGTPGSEMMVFALDPERPGT
                     DLRSRVFVPGLNITEDPATGSASACL"
     gene            complement(905..1654)
                     /locus_tag="VFN38_07155"
     CDS             complement(905..1654)
                     /locus_tag="VFN38_07155"
                     /inference="COORDINATES: protein motif:HMM:NF012401.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HET9011578.1"
                     /translation="MRSPLWHLAREAGAIDRRRFLALGGGSVAAALLAACNSKGPASA
                     ERLLRYAERKNEGVERWLLRHDSMDNARASAVAAGPRFPSYYIAPAVPVWDTTVRGPW
                     LLEVSGAVRRPLRLSLDDMQRLPSVSQRVNHYCVEGWTAVATWTGVRVSELARLAGAT
                     PAARYVDFQSFDDGYHESWDIESATHPQTLVAYGMDGHLLAPAHGAPARLHSPVKLGY
                     KNTKYLTKVVFLPERNGGYWSDQGYEWYGGT"
     gene            complement(1654..2427)
                     /locus_tag="VFN38_07160"
     CDS             complement(1654..2427)
                     /locus_tag="VFN38_07160"
                     /inference="COORDINATES: protein motif:HMM:NF013460.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HET9011579.1"
                     /translation="MSSPAPPRIVKRHHWVVRLTHWLSFVAITIMVGSGLRIFNAYPK
                     FARKGETFCCYPFEGKPIPRFLTFGGWLAGARNWHFAMMWLLVATGLLYLGFLFLHGE
                     WRDLAPRRGDARDAWEMVKFYLFARRDHPRQGKHNALQKGAYAAMPVVAAVIVLSGLA
                     IWKPVSLGWLTSLFGGYVWARYWHFVGMAVLVLLVAGHVFMVFAVDPYSIRSMITGRY
                     DERLSPEARNARPFYPLRPPHPADDGAPPPALSTTSGDA"
     gene            complement(2557..>4113)
                     /locus_tag="VFN38_07165"
     CDS             complement(2557..>4113)
                     /locus_tag="VFN38_07165"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HET9011580.1"
                     /translation="HHDAPVAGSVVLGGCGPDDGGTGVNASRAEISRFLWTLERAALA
                     ARWAHASAPPGVAIPARDSVLEEHQVSCPARARMTNPRPEFPVAPGVSSYELVASFVV
                     DSAGRPEPSTLRTLPGSDPRFVASFEETLPIWRYLAGRRAGHRVRQRVHVAVPFRRWN
                     AVTPSATAAVPVAPAGDGSDRVAIGPLRGESWSGAATEAREYVFDLIDARKAAAWADS
                     VTPYLRPDGRLPRGCYDGTCSFAVGEAEGAGIMLAVDARREGGVKYHLVLVGCNGGLG
                     AGYDVTGDEARSLVGSVRAAARVAAARPHRAPRVGAPRHAHEVACPAYDLVKAKSSPQ
                     AWEFQGWKSGEMVVARFTVDTAGKVDPRSVRTLPGPSRAAVDSLGYLLRTVRFQPAVF
                     GGRKVPQIVHWAIPIDVTPGDPQSPNPDLDMLADADYGWLGGPLRSADGYPVAGARVT
                     LTRSVGPRDRLPLPYEATSNEQGYYVIPAVLPGEYRLEIRAPGYPPLMPRLVTVNAEY
                     HTQLELVLER"
BASE COUNT          618 a         1444 c         1527 g          524 t
ORIGIN      
        1 cgaggcaggc cgacgccgag ccggttgccg ggtcttccgt gatgttgagg ccggggacga
       61 agacgcggga gcggaggtcg gtgcccggcc gctcgggatc gagggcgaag accatcatct
      121 ccgagcccgg cgttcccttg agcgaccgct cccacacgtc gagccgcacc cgcgcccggc
      181 gcaccgcgtc gcggctgcgc agcggcacga tcaggaaggg gattccgcag gacacggcct
      241 cgggctcgta gtcccctccc aggaagtccc cggcgtcgag cgagagcgcc tcggcgaggg
      301 tcgcgattct gggcgacggc ggcacgacct cggggagctt ggccaccgag agctggccga
      361 actccggcgt cagcccgccg ctctcgggga atcgcaccac caccggcacc gcgccgaccc
      421 cctcctcgag gacgatcgtc acctcccggc aatcggcgcg cagctcgccg ctggcgaaca
      481 gcacgaaggc cgtccccacg gtgggatggc cggcgaacgg gatctcgccc cccggcgtga
      541 agatccgcac gcgccgcgtg ttgcgcgcat cggccgccgg atagacgaac gtcacctcgg
      601 agaagttgaa ctcccgcgcg atcggcagga gcagctgctc ggggatgtcc cccgcgtccg
      661 gaaagaccgc cagctggttg ccgccgaagg ggcggtcggt gaagacgtcg gtgaggtagt
      721 agtgaaagga catgggaagg gcgaggagcg tgagtcgtga gatggctgcc gggcaagact
      781 aagtgcgcga gatgcgagat ggaacgacgc cgccgcggcg gaggggacgg cgcacgcggg
      841 ccatcgcacg tctcagcctc cgcgtgggac aacccgccat ctcatgtctc acgccattcg
      901 acctctacgt tccgccatac cactcgtacc cctggtcgct ccagtatccg ccgttccgct
      961 cggggaggaa cacgaccttc gtcaggtact tcgtgttctt gtagcccagc ttgacgggcg
     1021 aatggagacg cgccggggcg ccgtgggcgg gggcgaggag gtgaccgtcc atgccgtagg
     1081 cgacgagcgt ctgcgggtgc gtcgcgctct cgatgtccca gctctcgtgg tagccgtcgt
     1141 cgaacgactg gaagtccacg tagcgcgccg ccggcgtcgc tccggcgagg cgcgccagct
     1201 cgctcacccg cacgccggtc caggtggcga ccgccgtcca cccctccacg cagtagtggt
     1261 tgacgcgctg cgatacgctc ggcagccgct gcatgtcgtc gagcgagaga cgcagcggcc
     1321 gtcgcacggc gcccgacacc tcgagcaacc agggcccgcg gaccgtggtg tcccagaccg
     1381 gcaccgccgg cgcgatgtag tagctcggga agcgcgggcc ggcggcgacc gcggaggcgc
     1441 gcgcgttgtc catcgagtcg tggcgcagga gccagcgctc caccccctcg ttcttgcgtt
     1501 cggcgtagcg cagcagccgc tcggcggacg ccggcccctt cgagttgcag gcggcgagca
     1561 gtgccgccgc caccgacccg ccgccgagcg cgagaaagcg ccggcggtcg atcgctcccg
     1621 cctcgcgggc caggtgccag agaggggatc gcatcaggcg tcgccgctcg tcgtcgagag
     1681 ggcaggcggc ggcgcgccgt cgtcggcggg gtgggggggg cgcaggggat agaaggggcg
     1741 ggcgttgcgc gcctcggggg agaggcgctc gtcgtagcgg ccggtgatca tcgagcggat
     1801 cgagtacggg tccaccgcga agaccatgaa gacgtggccg gcgacgagca gcacgagcac
     1861 cgccatcccc acgaagtgcc agtagcgggc ccacacgtag ccgccgaaga gcgacgtcag
     1921 ccagcctaac gacacgggct tccagatggc gagccccgag agcacgatga ccgcggcgac
     1981 caccggcatc gccgcgtagg cgcccttctg cagcgcgttg tgcttcccct gacgcgggtg
     2041 atcgcgccgc gcgaagaggt agaacttcac catctcccag gcgtcgcgcg cgtcgccgcg
     2101 gcgcggcgcg aggtcccgcc actcgccgtg gagaaagagg aagccgaggt agaggagccc
     2161 cgtcgccacg aggagccaca tcatcgcgaa gtgccagttg cgcgcgccgg ccagccagcc
     2221 gccgaaggtg aggaacctcg gaatgggctt cccctcgaag ggatagcagc agaaggtctc
     2281 tcccttccgc gcgaacttcg ggtaggcgtt gaagatccgg agccccgacc cgaccatgat
     2341 cgtgatcgcg acgaagctga gccagtgcgt gagacgcacg acccagtgat gacgcttgac
     2401 gatgcggggc ggcgcgggag aggacatcgg caggacgggc gggaatcggg tggagacgga
     2461 gggcgcgccc ggcgcgccgg gcgcgatccg tccgccctca ggtaggcgcg cccgagggcg
     2521 atagttcccc gcggcgcgcc cgccagggtc ccgtcgtcaa cgctccagca cgagctccag
     2581 ctgcgtgtga tactcggcgt tgacggtcac gagtcggggc atgagcggcg ggtagcccgg
     2641 cgcccggatc tcgagcctgt attcgccggg cagcaccgcg gggatgacgt agtagccctg
     2701 ctcgttgctc gtcgcctcgt aggggagggg aagccggtcg cgcggcccca cgcttcgtgt
     2761 cagcgtcacg cgggcgcccg cgacgggata tccgtcggcg gagcggaggg ggccacccag
     2821 ccacccgtag tccgcgtccg cgagcatgtc gaggtcgggg ttcggcgact gcggatcgcc
     2881 cggcgtgacg tcgatcggaa tggcccagtg cacgatctgc ggcaccttcc gccccccgaa
     2941 gacggccggc tggaagcgca ccgtgcgcag gaggtagccg agcgagtcca cggcggcgcg
     3001 actcggcccg ggaagtgtcc ggacgctgcg tgggtccacc ttgccggccg tgtccacggt
     3061 gaagcgcgcg acgaccatct ccccggactt ccagccctgg aactcccacg cctgcggcga
     3121 cgacttcgcc ttcacgaggt cgtaggcggg gcacgcgacc tcgtgggcgt ggcgtggggc
     3181 gccgacgcgg ggagcgcggt gcggtcgagc cgcggcgacc cgcgccgccg cgcgcacgga
     3241 gccgacgagc gaccgcgcct cgtcgccggt gacatcgtag cccgcgccaa ggccgccgtt
     3301 gcagccgacg aggacgaggt ggtacttcac tccgccttct cgccgtgcgt ccacggcgag
     3361 catgattccc gcgccctcgg cttcgcccac ggcgaagctg cacgttccgt cgtagcagcc
     3421 gcgcggcagc cgaccgtcgg gacgcaggta cggggtcaca ctgtccgccc atgccgcggc
     3481 cttccgggcg tcgatgaggt cgaagacgta ctcgcgcgct tcggtggccg cgccgctcca
     3541 gctctcgccg cggagcggcc cgatcgccac gcggtcgctc ccgtcgccgg ccggcgccac
     3601 cgggacggcg gccgtcgcgc tcggcgtgac ggcgttccag cggcggaagg gcacggccac
     3661 gtgcacgcgc tgcctgacgc ggtggccggc gcgccggccg gcgaggtagc gccagatcgg
     3721 gagggtctcc tcgaagctgg cgacgaagcg cggatcgctg cccggcaggg tgcgcagcgt
     3781 ggagggctcg ggtcggcccg cgctgtccac gacgaagctc gccacgagct cgtagctcga
     3841 gacgccgggc gccaccggaa actccggtcg gggattcgtc atccgcgccc gcgccgggca
     3901 gctcacctga tgctcttcga ggaccgagtc ccgggccggg atcgcgaccc cgggcggggc
     3961 cgacgcgtgc gcccagcgcg cggccaacgc ggcgcgctcg agcgtccaga gaaagcgcga
     4021 gatctcggcg cggctggcgt tgacccccgt gcctccatcg tcggggccgc agccgccgag
     4081 gaccacggat ccggcgaccg gcgcgtcgtg gtg
//
LOCUS       DASSYW010000448         2161 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_861764, whole genome shotgun sequence.
ACCESSION   DASSYW010000448 DASSYW010000000
VERSION     DASSYW010000448.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2161)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2161)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2161
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_861764"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..630
                     /locus_tag="VFN38_07170"
     CDS             <1..630
                     /locus_tag="VFN38_07170"
                     /inference="COORDINATES: protein motif:HMM:NF012673.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HET9011581.1"
                     /translation="ILGEEFGEAGDPSARRWLIDPIDGTKTFVRGVPLWGTLIGVMQG
                     DDVLAGAVYCPAVDEMVVAAVGEGCWWNGSRTAVSRETDLSRSTILATAMRFADAPER
                     ERRWSSLAAEVAVARTWGDCYGYLLVATGRAELMVDHLMSPWDAAALVPVVREAGGEF
                     SDWDGRVTPFGNGALATNGVLAATLRARLGVPWAGGGRPMGAAGDDPHA"
     gene            623..1258
                     /gene="hisIE"
                     /locus_tag="VFN38_07175"
     CDS             623..1258
                     /gene="hisIE"
                     /locus_tag="VFN38_07175"
                     /EC_number="3.5.4.19"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004635 - phosphoribosyl-AMP
                     cyclohydrolase activity [Evidence IEA];
                     GO_function: GO:0004636 - phosphoribosyl-ATP diphosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphoribosyl-AMP
                     cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE"
                     /protein_id="HET9011582.1"
                     /translation="MPNVATLDLESLDFAKGGGLVSVVVQDATTGAVLMTAFADREAL
                     ERTIETGQMHFRSRSRGLWHKGATSGNTQRVVSLEGDCDGDAVLARVIPAGPACHTGT
                     TSCFPATSAKTDALADLDATIVARLSLGDDGSANGGHPSYTRRLASDRNLRLKKLGEE
                     CAELIVACADADRARMTEEAADLLYHAMVALRTAGVSLDDVRRTLAARHRV"
     gene            complement(1285..>2161)
                     /locus_tag="VFN38_07180"
     CDS             complement(1285..>2161)
                     /locus_tag="VFN38_07180"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HET9011583.1"
                     /translation="REQMIAGVRQRGDSPDALVSFMADSFAFSGHPYARSTLGTERSL
                     SRLTVAGLRRYHDEQIVKSRLLVAIVGNVPRAQIEQLVARTLGTLPNGTYAWTLPDIV
                     PGRAAGFAIEPRALPTNYLLGYYLGPPAGSKDYQALRVAAAVLSGQLFAEIRSRRNLT
                     YAVDAPFVERAIASGGLYVTTVSPDTTLALMREQIAALQQGTIDHEALERLVQQFITE
                     YFLNNETNAEQANFLARAQLYRGDFRIADRFVDELRQVSPEDVQRVARQYMRDVRFAY
                     VGDSLRLSAQTMKGF"
BASE COUNT          333 a          701 c          761 g          366 t
ORIGIN      
        1 attctcggcg aggagttcgg cgaggccggc gatccgagtg cacgccgctg gttgatcgac
       61 ccgatcgacg ggacgaagac ctttgtgagg ggcgtgccac tgtggggcac gctcatcggc
      121 gtcatgcagg gtgatgacgt cctcgctggc gccgtgtact gtcccgctgt cgacgagatg
      181 gtcgtcgccg ccgtcggtga gggatgctgg tggaacgggt cacgcacggc tgtgtcgcga
      241 gagaccgacc tgtcccgctc gacgattctc gcgacagcta tgcggttcgc cgacgcgccg
      301 gagcgcgagc gtcggtggtc gtcgctcgcc gccgaggtcg ccgtcgcgcg aacgtggggg
      361 gactgttacg ggtacttgct ggtggcgacc gggcgggcgg aactcatggt cgatcatctc
      421 atgtcaccgt gggacgccgc ggctctcgtc cccgtcgttc gtgaggcggg cggtgagttc
      481 agcgactggg acggccgcgt cacgccgttc gggaacggcg cgttggccac caacggcgtt
      541 cttgctgcca cgctgcgcgc tcggctcggc gtgccgtggg cgggcggtgg tcggcccatg
      601 ggcgcggcgg gagacgatcc gcatgcctaa cgtcgccacg cttgacctcg agtcgctcga
      661 tttcgcgaag ggcggcggac tcgtctcggt cgtcgtgcag gatgccacca cgggagccgt
      721 gctcatgacc gcgttcgccg accgggaagc gctcgagcgc accatcgaaa cggggcagat
      781 gcactttcgc tcgcgctccc gcgggctctg gcacaagggt gcgacgagcg gcaacaccca
      841 gcgtgtggtc tccctcgaag gcgattgcga tggcgacgcc gtgctcgccc gcgtgattcc
      901 ggccgggccg gcctgtcata cgggaacgac gtcgtgcttt cccgcgacat cggcgaagac
      961 cgacgcgctc gccgacctcg acgccacgat cgtggcgcgt ctgtcgttag gcgacgacgg
     1021 ttccgccaac ggcgggcatc ccagctacac tcgccggctc gccagcgacc ggaacctgcg
     1081 cctcaagaag ctcggcgagg agtgcgccga gttgatcgtc gcctgcgccg acgcggatcg
     1141 cgcgcgcatg accgaagagg cagccgatct cctctaccac gcgatggtcg cgttgcgcac
     1201 cgccggtgtg tcgctcgatg acgttcgacg gacgctcgcg gcgcgccacc gggtgtgacc
     1261 accgcacgct gcaatcgagc cgcctcagaa gcctttcatg gtctgggccg atagccgcag
     1321 ggagtcgccg acgtaggcaa atctcacgtc gcgcatgtat tgccgggcaa cacgctggac
     1381 gtcctccggg ctcacctgac gcagctcgtc gacgaaccgg tcggcgatgc ggaagtcgcc
     1441 gcgatacagc tgcgctcgcg ccagaaagtt cgcctgctcg gcgttcgttt cgttgttcag
     1501 gaaatactcg gtgatgaact gctgcacgag gcgctcgagg gcctcgtggt cgatggtgcc
     1561 ctgttgcagg gcagcgatct gctcgcgcat gagcgccagc gtcgtgtccg gtgaaacggt
     1621 ggtgacgtac aaccctcccg acgcgatagc ccgctcgacg aacggtgcgt cgactgcgta
     1681 cgtgagattg cggcgggatc ggatctccgc gaagagctgc ccggagagca ccgccgccgc
     1741 cacgcgaagg gcctggtagt ccttgctgcc ggcggggggc ccgaggtagt agccgaggag
     1801 gtagttcgtc ggcagcgctc tcggttcgat cgcgaaccca gcggcccgcc cgggcacgat
     1861 gtcgggcaag gtccaagcgt aggtgccgtt aggcagcgta cccagcgtcc gggcgacgag
     1921 ttgttcgatc tgtgcacgtg ggacgtttcc gacgatcgcc acgagcaggc gcgacttcac
     1981 gatctgctca tcatgatacc ggcgaaggcc cgcaaccgtc agccgcgaca gcgaccgttc
     2041 ggtgcctaac gtgcttcggg catacggatg gccggagaac gcgaagctgt ccgccatgaa
     2101 cgagacgagc gcatccgggc tgtcgccgcg ctgacgcaca ccagcgatca tctgttctcg
     2161 t
//
LOCUS       DASSYW010000449         2704 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_442419, whole genome shotgun sequence.
ACCESSION   DASSYW010000449 DASSYW010000000
VERSION     DASSYW010000449.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2704)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2704)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2704
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_442419"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            101..886
                     /locus_tag="VFN38_07185"
     CDS             101..886
                     /locus_tag="VFN38_07185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011584.1"
                     /translation="MTALPHRALSLALAIALVASPAAGAQWGRSPLPRSRADVLLDAG
                     LWPQAEEAYYAQSRVRPRAPAPRAALGRYLAMKGAVLPGTILIEEALKFGLDSTMARA
                     LLKPWKSVMEWRAIATIRADSVVRVRPPRDSTALFQLPLPPRPAADGTPRTSYRDTVW
                     ADVVPRLIGSDSLYTRSPRVGLELIEALVPSLDTATMRLTLHADAKSANRSTGLRFPL
                     LRDAKDVRVLMTSGRILSLPAALRELAPKWWQVDLLHGMLIVR"
     gene            complement(917..1378)
                     /locus_tag="VFN38_07190"
     CDS             complement(917..1378)
                     /locus_tag="VFN38_07190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HET9011585.1"
                     /translation="MTTAHTSAADWRAHLIDDDAGIARLLDRTHRIAVLGIKTAETHQ
                     PAYYVPQYAQRAGYEIVPVPVYYPDVTQILGEPVHRRVADVPGRVDMVNVFRRPKDIP
                     AHVDDIIAARPASVWFQLGIRHDESAERLARAGIDVVQDRCLLVELQNVGK"
     gene            1491..2636
                     /locus_tag="VFN38_07195"
     CDS             1491..2636
                     /locus_tag="VFN38_07195"
                     /inference="COORDINATES: protein motif:HMM:NF027964.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="saccharopine dehydrogenase C-terminal
                     domain-containing protein"
                     /protein_id="HET9011586.1"
                     /translation="MRMLVLGAGLQGSACAYDLLQNPAVTQVRLADLRFDHLPTFLAP
                     HSGPRLLPTTLDVRDRQAVLAVMRESDAVMSAIPYYFNLQLAECAVEAGVHFCDLGGN
                     TEIVFQQKALAEKAKAKKVTVVPDCGVAPGMVNIFAEYGIRQLDAVESVRIYVGGLPQ
                     HPEPPLNYQIVYSLEGVLDYYTTLSWVVREGKRAQVVALSERETVPFPKPLGDLEAFH
                     TAGGLSTMAWRYEGKIPTMEYKTLRYPGHAELMESIRSLGLLDLEPVDVKGQKVIPRD
                     VFVSVVGPKLTKPTGKDVLALRVTVKGTKAGQPATRQFDLIDRYDEQHGISAMMRTTG
                     YSLSITGQMQVRGEVAPPGVWTPDECMPAKEYIAELRKRGMDVRETQ"
BASE COUNT          388 a          953 c          943 g          420 t
ORIGIN      
        1 aggctcgggc gacgatcccg ttgcccgggc gcttccccac ccgtcctgct tccatgagct
       61 tcgatcccga ccatctcctg ctcgcgcgca tccggcagcc atgaccgcgc tgccgcatcg
      121 tgcgctgtcg ctggcgctcg ccatcgccct ggtggcgtcg cccgccgcgg gcgcccagtg
      181 gggccgttcg cccctcccgc gctcgcgcgc cgacgtgctg ctcgacgccg gcctctggcc
      241 gcaggccgag gaagcctact atgcgcagtc gcgcgtgcgt ccgcgtgcgc cggcgccgcg
      301 ggcggcactc ggccgctatc tcgccatgaa gggcgccgtg ctgcccggga ccatcctcat
      361 cgaggaggcg ctcaagttcg ggctcgactc caccatggcg cgcgcgctgc tcaagccgtg
      421 gaagtccgtg atggagtggc gcgccatcgc gaccatccgc gccgactccg tggtgcgcgt
      481 gcgcccgccg cgcgactcta ccgcgctctt ccagctgccg cttcccccgc ggcccgcggc
      541 cgacggcacg ccgcgcacga gctatcgcga taccgtgtgg gccgacgtcg tgccgcgact
      601 catcggatcg gacagcctct acaccaggtc gccgcgcgtc ggcctcgagc tgatcgaggc
      661 gctggtgccg tcgctcgaca cggccacgat gcgcctcacc ctgcacgccg acgcgaagtc
      721 cgcgaaccgc tcgaccggcc tgcgctttcc gctgctccgc gacgcgaagg acgtgcgcgt
      781 cctgatgacg tcgggccgca tcctctccct gcccgccgcc ctgcgcgagc tcgcgccgaa
      841 atggtggcag gtggatctcc tgcacgggat gctgatcgtg cggtgagcgg cgcgtcgcgg
      901 ccgtccgccg gccgcgctac ttgcccacgt tctggagctc caccagcagg cagcggtcct
      961 gcacgacgtc gatgcccgcg cgtgccagcc gctccgcgga ctcgtcgtgc ctgatgccga
     1021 gctggaacca caccgacgcc ggcctggccg cgatgatgtc gtcgacgtgt gcggggatgt
     1081 cctttggccg gcggaacacg ttcaccatgt ccacgcggcc aggcacgtcc gcgacccggc
     1141 gatgcaccgg ctcgccgagg atctgggtca cgtcgggata gtagaccggc acgggcacga
     1201 tctcgtagcc ggcgcgctgc gcatactgcg ggacgtagta cgccggctgg tgcgtctcgg
     1261 ccgtcttgat gccgagcacc gcgatgcgat gcgtgcggtc gagcaggcgc gcgatcccgg
     1321 cgtcgtcgtc gatgagatgg gcccgccaat cggccgctga agtgtgggct gtcgtcatgc
     1381 cgcaccgtgt tgcagggacc gtgcgcgcca cgcggttggc cggaccgcgc gccccgcggt
     1441 tagatttgac ggctcgacct cgccacgacc gtcacggaga aatcgtcctg atgcgaatgc
     1501 tcgtcctcgg cgcgggcctg caaggctccg cgtgcgcgta tgacctgctg cagaatccgg
     1561 ccgtgaccca ggtccggctc gccgacctgc ggttcgacca tctgccgacc tttctcgccc
     1621 cgcactccgg gccgcgcctg ctgcccacga cgctcgacgt gcgcgaccgc caggccgtgc
     1681 tcgccgtgat gcgcgagtcg gacgcggtga tgagcgccat tccctactac ttcaacctcc
     1741 agctcgccga atgcgcggtg gaggccggcg tgcacttctg cgatctcggc ggcaacaccg
     1801 agatcgtgtt ccagcagaag gcgctcgcgg agaaggcgaa ggcgaagaag gtcaccgtcg
     1861 tgccggattg cggcgtcgcg ccgggcatgg tgaacatctt cgccgaatac ggcatccgcc
     1921 agctcgacgc ggtggagtcc gtgcgcatct acgtcggcgg gctcccgcag catccggagc
     1981 cgccgctcaa ctaccagatc gtgtactcgc tggaaggggt gctcgactac tacacgaccc
     2041 tgtcgtgggt ggtgcgcgag ggcaagcgcg cgcaggtggt ggcgctctcc gagcgcgaga
     2101 cggtgccgtt ccccaagccg ctcggcgatc tcgaggcgtt tcacaccgcc ggcggcctgt
     2161 cgaccatggc gtggcggtac gaggggaaga tcccgacgat ggagtacaag acgctccgct
     2221 acccggggca cgccgagctg atggagtcga tccgctcatt gggcctgctg gacctggagc
     2281 cggtggacgt gaaggggcag aaggtgattc cccgcgacgt cttcgtcagc gtcgtcggcc
     2341 cgaagctcac caagcccacg ggcaaggatg tgctcgcgct ccgcgtgacg gtgaaaggca
     2401 cgaaggcggg ccagccggcg acgcggcagt tcgacctcat cgaccggtac gacgagcagc
     2461 acgggatcag cgccatgatg cgcacgaccg gctactcgct ctccatcacc gggcagatgc
     2521 aggtgcgcgg cgaggtcgcc ccgccgggcg tgtggacccc cgacgaatgc atgccggcga
     2581 aggagtacat cgccgagctg cggaagcggg ggatggatgt tcgggaaacg cagtgaggct
     2641 gtgaagcggt gaggcggtga ggcggtgagg cggtgaagcg gtgaagcggt gaagcggtga
     2701 agcg
//
LOCUS       DASSYW010000450         2668 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_903710, whole genome shotgun sequence.
ACCESSION   DASSYW010000450 DASSYW010000000
VERSION     DASSYW010000450.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2668)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2668)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2668
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_903710"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..738)
                     /locus_tag="VFN38_07200"
     CDS             complement(<1..738)
                     /locus_tag="VFN38_07200"
                     /inference="COORDINATES: protein motif:HMM:NF020893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HET9011587.1"
                     /translation="MIHHLGQLIGDYGYVIVGLFIFFEGLAVPFPTDTTVVTAAAFAA
                     HGRLSLAMIFVVSTMSAAGGTTVAFLAGRRGGTFFDRHSRRVHPRVLQRTGAFFDRHG
                     GTAVIVGRFIPIARMLISPMAGLSTMSLLRFSLFNLTGAALWSAVFCAVGFLFGQHPP
                     SFGPGLARAALIVTIGLALLVTVAVAGGWLVEGSDAAWRAEGTLWHRLLSTAPLRWLA
                     AHSPRARAFLFRRFSPADYLGLNLTLGL"
     gene            831..1511
                     /locus_tag="VFN38_07205"
     CDS             831..1511
                     /locus_tag="VFN38_07205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011588.1"
                     /translation="MIQASPAQAPTPPLPPAIPGGTIVSSRVLNNSPMSAQEVAALRA
                     RREVLSDQLRSADGRRRELSRLVKNATGADKAGLEQRIGVLDARLARLENDIDETGKL
                     LASAPAALASTREPQTFNFGPASQNKMQDVTPIVAIIAVFAIFPIALSIARNIWRRGS
                     RPAPAELDRESALRLERMEQAMDAIAVEIERVSEGQRFVTRLLGEQRVAQPVAEPVAL
                     PPSERSRL"
     gene            complement(1544..1792)
                     /locus_tag="VFN38_07210"
     CDS             complement(1544..1792)
                     /locus_tag="VFN38_07210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011589.1"
                     /translation="MTDSAESGQPTHAGSAAARVRVYVDGDGTRWQVSERPFADYDRR
                     RGLSLIFASDAAVRRVREYPADWYTLSDDELHALSWKA"
     gene            1938..>2668
                     /locus_tag="VFN38_07215"
     CDS             1938..>2668
                     /locus_tag="VFN38_07215"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF019846.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HET9011590.1"
                     /translation="MPTFRDHFAFAARSYAAFRPHYPAALFDWLAGASPRRERAWDCG
                     TGSGQAAVGLATHFDVVVATDPSLQQLGSAQRARGVEYLAMPAESAALADASVDLVAV
                     AQALHWFDRPRFFGEVDRVLRPGGMLAVWSYGLLAITPAIDAVLHALYVHTLGDYWPS
                     ERALVDSGYAGIDLPYPELTTPHFSMQASWELQDLEGYLSTWSAVGRYRAVTGADPLQ
                     PLHHALASAWGSERRLAVRWPLVVRA"
BASE COUNT          425 a          939 c          919 g          385 t
ORIGIN      
        1 gagccccagc gtgagattga gaccgagata gtccgccggc gagaagcggc ggaacaggaa
       61 ggcgcgcgcc cgcggcgagt gcgcggcgag ccagcggagc ggtgccgtgc tcaggagtcg
      121 gtgccagagg gtgccctcgg ctcgccatgc ggcatcgctt ccttccacga gccacccgcc
      181 cgcgaccgcg acggtgacga gcagcgcgag tccgatggtg acgatgagcg cggcgcgtgc
      241 gagcccgggg ccgaatgagg gcggatgctg cccgaacaga aaccccaccg cgcagaacac
      301 cgcggaccac aacgcggcgc ccgtcaggtt gaacagcgag aagcggagga ggctcatcgt
      361 ggacagcccg gccatgggcg agatgagcat gcgcgcgatc ggaatgaagc gtcccacgat
      421 caccgcggtt ccgccatgcc ggtcgaagaa ggccccggtg cgctggagca ccctggggtg
      481 cacgcgccgc gaatgacggt cgaagaaggt gccgccgcgc cgaccggcga ggaacgccac
      541 ggtggtgcca cccgccgcgg acatggtgga cacgacgaag atcatcgcca gcgaaagccg
      601 gccatgcgcc gcgaacgccg ccgccgtcac caccgtggtg tcggtgggga agggaacggc
      661 gagcccctcg aagaagatga acaggccgac gatgacgtag ccgtagtcgc cgatcagctg
      721 gccgagatgg tggatcatgg cttcggtgcg ggcaaccgtc tggcccgatg ggtcgtccta
      781 cggtagatac ttcctgacac cagcccgctc gactctccgt agatagacgc atgatacaag
      841 cttcccccgc gcaggcgccc accccgccgc tcccgcccgc catcccgggc ggaacgatcg
      901 tctcgtcgcg cgtgctgaac aactcaccga tgagcgccca ggaagtcgcc gcgcttcgag
      961 ccagacggga ggtgctgtcc gaccagcttc ggtccgccga cggccgtcgc cgcgagctct
     1021 cgcgacttgt caagaacgcc accggcgcgg acaaggccgg gctcgagcag cgcatcggcg
     1081 tgctcgacgc gcgcctggcc cgactcgaga atgacatcga cgagaccggc aagctgctcg
     1141 cctcggcgcc cgcggcgctc gcctccacgc gcgagccaca gaccttcaac ttcggaccgg
     1201 cgtcgcagaa caagatgcag gacgtgacgc cgatcgtggc gatcatcgcc gtgttcgcga
     1261 tcttcccgat cgcgctgtcc atcgcgcgca acatctggcg tcgtggctcg cgtcccgcgc
     1321 cggccgagct cgaccgggag tcggccctgc gactcgagcg gatggagcag gccatggacg
     1381 cgatcgccgt ggagatcgag cgcgtgtccg aaggtcagcg cttcgtgacg cgtctcctgg
     1441 gcgagcaacg cgtcgcacaa ccggtggccg agccggtcgc cctgcccccg agcgagcgct
     1501 cgaggctctg agcgcgccgt cagcctgagt ggcgctggtc cgctcaggcc ttccagctca
     1561 gtgcgtgcag ctcgtcgtcg ctcagggtgt accagtccgc gggatactcg cgcacgcggc
     1621 gcaccgcggc atcgctggcg aagatcaggg agagcccgcg tcgccggtcg tagtcggcga
     1681 agggacgctc cgacacctgc caccgcgtac cgtcgccatc cacgtagaca cgtacccgcg
     1741 cggccgcgct acctgcgtgc gtcggctggc cgctctcggc ggaatcggtc atctcgttgg
     1801 aggcatcgtg gggaggtggc gggcccgggc gtgccgagcg aagcgctcaa gctcgctttg
     1861 aacgtcccgc gagtcaatcg ttgtacgata gtacgcgatc ggcccgagca cagttccacg
     1921 gatcacgcct ctgcctcatg cccacctttc gcgaccattt cgccttcgcc gcgagatcgt
     1981 acgccgcctt ccggccgcac taccccgctg cactgttcga ctggctggcg ggcgcatccc
     2041 ctcgtcgcga acgagcgtgg gattgcggga ccggcagcgg gcaggccgcc gtggggctcg
     2101 ccacccactt cgacgtggtg gtcgccaccg acccgagcct gcagcagctg ggcagcgccc
     2161 agcgggcgcg cggtgtcgag tacctggcca tgcccgcgga gtccgcggcg ctcgccgacg
     2221 ccagcgtgga tctcgtggcg gtcgcgcagg cacttcactg gttcgatcga ccgcgcttct
     2281 tcggtgaagt ggatcgagtg ctgcgccccg ggggcatgct cgcggtgtgg agctacggac
     2341 tcctcgcgat cacaccggcg atcgacgccg tgctgcacgc gctgtacgtg cacaccctgg
     2401 gtgactattg gccgtccgag cgcgcactcg tggacagcgg gtatgccggc atcgacctgc
     2461 cctatcccga gctgacgacg ccgcacttct ccatgcaggc gagctgggag cttcaggacc
     2521 tcgagggcta cctctccacc tggtcggccg tcggccgcta ccgcgctgtc acgggggccg
     2581 atccgctcca gcctcttcac cacgcgctcg catccgcgtg ggggtcggag cgacgtctgg
     2641 ccgtgcgatg gccgctcgtc gtgcgagc
//
LOCUS       DASSYW010000451         2577 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_427697, whole genome shotgun sequence.
ACCESSION   DASSYW010000451 DASSYW010000000
VERSION     DASSYW010000451.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2577)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2577)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2577
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_427697"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..319
                     /locus_tag="VFN38_07220"
     CDS             <1..319
                     /locus_tag="VFN38_07220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011591.1"
                     /translation="EHRHIAFGVRFLKEMVESDSRYGKIVQRRIEELVPRAVHVFVPP
                     YVDSASDFVSYDWHSSHIYGYAYRKLKRRMAVLGLEAPPAEELMPGAIASPEESRAAG
                     APV"
     gene            389..1306
                     /locus_tag="VFN38_07225"
     CDS             389..1306
                     /locus_tag="VFN38_07225"
                     /inference="COORDINATES: protein motif:HMM:NF025736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HET9011592.1"
                     /translation="MRKTSALRRFALAAAVVGAVVPPLRSRFNLPRPVVSAVAWQSPV
                     ALALALPRTRARDAGIYALQMWAYFAHYAMPADDEEEIARRLRVSYPVRFDTALGRGA
                     TPTLRLQRLLGRQGEVRPHDTFLSAVHWAWFIVPHGTAAYVLLKDRDQYPRAASQIAA
                     VFDLGLIGYWAVPTAPPWWAGSNGHMPHVRRIMIEAGERFWGRLWGPLYDSLQGNPFA
                     AMPSLHFATSVMAAHVLSDTGRAQGVVGWTYAATLGFALVYLGEHYVLDLLVGLGLAE
                     AVRRGIPAVAPLFASLEDGLRNLEPAGGS"
     gene            1306..2529
                     /locus_tag="VFN38_07230"
     CDS             1306..2529
                     /locus_tag="VFN38_07230"
                     /inference="COORDINATES: protein motif:HMM:NF015651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase transmembrane
                     domain-containing protein"
                     /protein_id="HET9011593.1"
                     /translation="MADDRVEEVVERDPLDPTLDTGELQAEELVSEDQDFEERGRELL
                     TRRRVISLVLAVALMVVAIYIVFPKVVGIEGAVLDRVGDATWYWVVLALPFNVLAFVA
                     YAMLFRGVLGVGGRGDEPDDEVRRRLDMRVSYQITMSGYLATILFSAAGAGGVALTYW
                     ALRKAGMPRGRAACRMVAFLALLYTVYLASLVIFGTLLRVGVLPGDDPVGGTIVPAAL
                     AAVALVILALVSIIPGDVERRIWRYSSGRGRVPRFAARIARVPAVVATGVRTALAYIR
                     HPKRSANALVGAVGWWAGNIGVLWASFQAFGVDVPVGVLIQGFFVGMVANLAPSPAGG
                     VGTVDAGLIGSFVLFGIPADEVFPAVLLFRAIGFALPIPLGIWGYIGLRRTVRRWAEE
                     DRGATIQSKVSAETR"
BASE COUNT          312 a          894 c          951 g          420 t
ORIGIN      
        1 cgagcaccgc cacatcgcgt tcggcgtcag gttcctcaag gagatggtgg agtccgacag
       61 ccgctacggg aagatcgtgc agcgccggat cgaggagctc gtgccgcgcg cggtgcacgt
      121 cttcgtgccg ccgtacgtgg acagcgcgag cgacttcgtc tcctacgact ggcactcgtc
      181 gcacatctac ggctacgcct accgcaagct caagcggcgg atggcggtgc tcgggctcga
      241 ggcgccgccg gcggaggagc tgatgccggg ggcgatcgcc tcgcccgagg agtcgcgcgc
      301 ggccggcgcg cccgtctagc gatggccatc tagcgggagc ccgtcgcggc cgagtccgac
      361 cggtccccgg acctatactc gcggcgcctt gcgtaagacg agcgccctac gccgcttcgc
      421 gctcgccgcc gcagtggtcg gcgcggtcgt gccgccgctc aggtcgcgct tcaacctgcc
      481 gcgcccggtg gtgtccgcgg tggcatggca gtcgccggtc gcgctcgcgc tcgcgctgcc
      541 tcgcacgcgc gcgcgcgacg cgggcatcta tgcccttcag atgtgggcct acttcgccca
      601 ctacgcgatg cccgccgacg acgaggagga gatcgcgcgg cgcctgcgcg tgagctaccc
      661 ggtgcggttc gacaccgccc tcgggcgagg cgcgacgccc accctgaggc tccagcgact
      721 gctcggccgc cagggcgagg tgcgcccgca cgacacgttc ctctcggccg tgcactgggc
      781 gtggttcatc gttccccacg gcaccgcggc ctacgtgctg ctcaaggacc gcgaccagta
      841 cccgcgcgcg gcgtcgcaga tcgcggccgt gttcgacctc ggcctgatcg gctactgggc
      901 ggtgcccacc gcgccgccgt ggtgggccgg cagcaacggc cacatgcccc acgtgcgccg
      961 gatcatgatc gaggcgggcg agcggttctg gggaaggctc tggggcccgc tttacgattc
     1021 gttgcaggga aacccgttcg ccgcgatgcc ttcgctccac ttcgccacgt cggtaatggc
     1081 cgctcacgtg ctgtcggaca ccggccgcgc gcagggcgtc gtgggctgga cgtatgccgc
     1141 cacgctcggc ttcgcgctcg tctacctcgg cgagcactac gtcctcgacc tgctcgtggg
     1201 gctcgggctg gccgaggcgg tgcgccgggg gatccccgcg gtcgcgccgc tgttcgcctc
     1261 gctcgaggac ggcctgcgga acctggagcc ggccggggga tcgtgatggc ggacgatcgg
     1321 gtggaggagg ttgtggagcg cgacccgctc gacccgacgc tcgacaccgg cgagctccag
     1381 gcggaggagc tcgtctcgga ggaccaggac ttcgaggagc gcggcaggga gctgctcacc
     1441 cgccgacgcg tgatcagcct cgtgctggcg gtggcgctga tggtggtggc catctacatc
     1501 gtcttcccga aggtggtggg catcgagggc gccgtgctcg accgcgtcgg cgacgccacc
     1561 tggtactggg tggtgctcgc gctgccgttc aacgtgctcg cgttcgtcgc ctacgcgatg
     1621 ctgttccgcg gagtgctcgg tgtgggcggc cgcggcgacg agcccgacga cgaggtccgg
     1681 cgccggctcg acatgcgggt ctcgtaccag atcacgatgt cgggctacct ggccacgatc
     1741 ctgttctcgg cggcgggcgc gggcggggtg gcgctcacgt actgggcgct ccgcaaggcc
     1801 gggatgccgc gcggccgagc ggcctgccgc atggtggcgt tcctcgcgct cctctacacg
     1861 gtctacctcg cgtcgctcgt gatcttcggg acgctgctgc gagtgggcgt gctgccgggc
     1921 gacgacccgg tgggcggaac gatcgtgccc gcagcgctcg ccgccgtcgc gctcgtgatc
     1981 ctcgcgctcg tgtccatcat cccgggcgac gtggagcgcc gcatctggcg ctacagctcg
     2041 ggtcgtgggc gcgtgcccag gttcgccgcg cgcatcgcgc gcgtgccggc cgtggtggcc
     2101 acgggcgtgc gcaccgcgct cgcctacatc cgccacccga agcggagcgc caacgcgctc
     2161 gtgggcgcgg tgggctggtg ggccggcaac atcggcgtgc tgtgggcgag cttccaggcg
     2221 ttcggggtcg acgtgccggt cggcgtgctc atccagggct tcttcgtcgg gatggtggcc
     2281 aacctggcgc cgtcaccggc cggtggcgtc ggtacggtgg acgcgggcct gatcggctcg
     2341 ttcgtcctgt tcggcatccc cgcggatgag gtgttccccg ccgtgctgct gttccgggcc
     2401 atcgggttcg cgctaccgat tccgctcgga atctggggct acatcgggct ccggcgcacc
     2461 gtccggcgct gggcggagga ggatcgcggc gctactatac aaagtaaagt gagtgcggag
     2521 accagatgag caacggcata gagaacgtca tcatcatcgg cagcggccct gccgggt
//
LOCUS       DASSYW010000452         3302 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_405569, whole genome shotgun sequence.
ACCESSION   DASSYW010000452 DASSYW010000000
VERSION     DASSYW010000452.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3302)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3302)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3302
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_405569"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..656
                     /locus_tag="VFN38_07235"
     CDS             <1..656
                     /locus_tag="VFN38_07235"
                     /EC_number="2.4.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008479 - tRNA-guanosine(34) queuine
                     transglycosylase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HET9011594.1"
                     /translation="DRCRAEFERLVREDPIPGWHEQALFPIVQGGIHAGLRAEAARAI
                     RDMGDWTGFGIGGLSVGEPKPEMYRILEAVHDTLPLDRPRYLMGVGFPEDLVEGVRRG
                     VDLFDCVAPTRMGRNGAVFTTDGRLNIKRAEFRTDRRPLDPECDCAACRRFSRAYIRH
                     LYLSDEILGLRLLSLHNVHFLVSLMRRARGALLDGTFHGWSEAWLRRYHSRTVPASV"
     gene            653..1024
                     /gene="yajC"
                     /locus_tag="VFN38_07240"
     CDS             653..1024
                     /gene="yajC"
                     /locus_tag="VFN38_07240"
                     /inference="COORDINATES: protein motif:HMM:NF014725.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HET9011595.1"
                     /translation="MIHQGFSAALLALQFGGAGGSMAPFLLQIVAIFGIFYFLIIRPQ
                     QAQKKKHEEALRNIKRGDRIVTFGGIIGEVVHVKETVEGGAKSGMEDEVTIKSAESRL
                     IVERGRIARIVGVSAGVPARA"
     gene            1035..1601
                     /gene="def"
                     /locus_tag="VFN38_07245"
     CDS             1035..1601
                     /gene="def"
                     /locus_tag="VFN38_07245"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: protein motif:HMM:NF001159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042586 - peptide deformylase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HET9011596.1"
                     /translation="MGILDIRVLGDPILRQVTTPVAGVTDELRRLIADMFDTMHHARG
                     IGLAAPQVGRTERLAVADVDDERFVLINPVVVEHEGRAKGEEGCLSIPDLYADVERPK
                     TVTVRALDENFQPYEIEATDLLARCIQHEIDHLDGKLFIDYLSVLKRTAALAKWKLEQ
                     GKYPGYIRRVSLETADDLREHEHLEEEL"
     gene            1602..2555
                     /gene="fmt"
                     /locus_tag="VFN38_07250"
     CDS             1602..2555
                     /gene="fmt"
                     /locus_tag="VFN38_07250"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR00460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004479 - methionyl-tRNA formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HET9011597.1"
                     /translation="MRVLFWGTPDFAAPALRALLGEGFDVAGVVTQPDRPVGRSRSRL
                     EPSAVKLVALADGLPVLQPEKPRGAEFMAQVRALEPDVSVVVAYGHILPREVIDLPPH
                     GTLNIHASLLPALRGAAPIQAAIRDGLGETGVTIMQMVPRLDGGPILLQARTPVLADE
                     TAGELTLRLSELGALALIESLALLEMGRATPQPQDEAKATYAPKLTRETARVDWTRSA
                     HEVGGHVRAYDPKPGAWGRINGVEVKLFGARTAPRGGNREPGDVIAIGAEGMLIACGG
                     GAVRIVAVQPSGKRRLSPLDWANGRGVAVGDRFDTGAAPPA"
     gene            2563..3228
                     /locus_tag="VFN38_07255"
     CDS             2563..3228
                     /locus_tag="VFN38_07255"
                     /inference="COORDINATES: protein motif:HMM:NF014622.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HET9011598.1"
                     /translation="MPIRQPDLRTPDAVPRVHVVTTDEVVTRADFIDVACGVMGVLGP
                     RGALHLRANRATGARLQALGESLSAAQRVTGAWLVVNDRVDVALVVRARGAQLTSHSL
                     TAADARRAAPALAIGASVHGVAEGVEAAQDGADWLVAGRVFAPVTHPGEDGRGMEFVE
                     GLVAAVRVPVIAIGGVRPKHCRALRLAGVHGIAVIRGIWDAPNAERAASDYLSCYEDA
                     GVA"
BASE COUNT          450 a         1167 c         1232 g          453 t
ORIGIN      
        1 tcgaccgctg ccgcgccgag ttcgagcggc tggtgcgcga ggatccaatc cccggctggc
       61 acgagcaggc gctctttccc atcgtgcagg gggggatcca cgccggcctg cgcgccgagg
      121 cggcgcgcgc gatccgcgac atgggcgact ggacggggtt cggcatcggc gggctctcgg
      181 tcggcgagcc gaagccggag atgtaccgca tcctggaggc ggtgcacgac accctgcccc
      241 tcgaccgtcc gcggtacctg atgggcgtcg gctttccgga ggacctcgtc gagggggtgc
      301 gtcgcggggt cgacctgttc gactgcgtgg cgcccacgcg gatggggcgc aacggcgccg
      361 tcttcaccac cgacggccgg ctgaacatca agcgggccga gttccggacg gaccgccgcc
      421 cgctggatcc ggagtgcgac tgcgcggcct gccgccgctt ctcgcgcgcc tacatccgcc
      481 atctctacct gtccgacgag atcctcgggc tgcgcctcct ctcgctgcac aatgtacatt
      541 tcctcgtgtc gctgatgcgg cgggcgcgcg gcgccctcct cgacggcacc tttcacggct
      601 ggagcgaggc ctggctccgg cgctaccact cccgcaccgt tccggcatcc gtatgatcca
      661 tcagggattc tccgccgcct tgctcgccct gcagttcggc ggcgccggcg gcagcatggc
      721 gcccttcctc ctccagatcg tcgccatctt cggcatcttc tacttcctca tcatccgtcc
      781 gcagcaggcg cagaagaaga agcacgagga ggcgctgcgg aacatcaagc gcggcgaccg
      841 catcgtcacc ttcggcggca tcatcggcga ggtcgtgcac gtgaaggaga cggtggaagg
      901 cggcgcgaag agcgggatgg aggacgaggt cacgatcaag tcggccgagt cgcgcctcat
      961 cgtggagcgc ggccgcatcg cgcgcatcgt cggcgtgagc gccggcgtgc cagccagggc
     1021 ctgagcgggg cgacgtgggc atcctcgaca tccgcgtcct cggcgatccg atcctccggc
     1081 aggtcaccac gccggtggcc ggggtcacgg acgagctgcg ccggctgatc gccgacatgt
     1141 tcgacacgat gcatcacgcg cgcggcatcg ggctcgccgc gccgcaggtg gggcgcacgg
     1201 aacgcctcgc cgtcgccgac gtggacgacg agcgcttcgt gctgatcaac cccgtggtcg
     1261 tcgagcacga ggggcgcgcg aagggcgagg aaggatgcct gtcgatcccg gacctctacg
     1321 ccgacgtcga gcggccgaag acggtgaccg tccgcgcgct ggacgagaac ttccagccat
     1381 acgagatcga ggccaccgac ctgctggcgc gctgcatcca gcacgagatc gaccacctcg
     1441 acggcaagct gttcatcgac tacctgagcg tcctgaagcg cacggccgcc ctcgcgaagt
     1501 ggaagctcga acagggcaag tatcccggct acatccgccg cgtgtcgctc gagacggccg
     1561 acgaccttcg cgagcacgag cacctggaag aggagctcta ggtgcgggtc ctcttctggg
     1621 ggacccccga cttcgccgcc cccgcgctga gggcactgct cggcgaaggc ttcgacgtgg
     1681 cgggcgtggt gacccagccg gacaggccgg tgggccggtc gcgctcccgc ctcgagccct
     1741 cggcggtgaa gctggtcgcg ctggccgacg ggctaccggt gctccagccc gagaagccgc
     1801 gcggcgcgga gttcatggca caggtccggg cgctcgagcc cgacgtcagc gtcgtggtcg
     1861 cgtacggcca catcctgccc cgggaggtga tcgacctgcc cccgcacggg acgctgaaca
     1921 tccacgcgtc gctcctcccc gcgctccgcg gcgccgcccc catccaggcc gccatccgcg
     1981 acgggttggg cgagacgggg gtgaccatca tgcagatggt acccaggctc gacgggggcc
     2041 ccatcctcct gcaggcgcgt accccggtgc tggccgacga gacggccggc gagctgacgc
     2101 tgcggctgag cgagctggga gcgctggccc tgatcgagtc gctcgcgctg ctcgagatgg
     2161 ggcgcgccac gccgcagccg caggacgagg cgaaggccac ctatgcgccc aagctcaccc
     2221 gcgagacggc gcgggtggac tggacgcggt cggcccacga ggtggggggc cacgtccgcg
     2281 cctacgaccc caagccgggc gcgtggggga ggatcaacgg cgtcgaggtc aagctgttcg
     2341 gcgcccgcac cgcgccgcgc ggcggcaatc gcgagcccgg cgacgtgatc gccatcggcg
     2401 ccgaggggat gctgatcgcg tgcggcggcg gcgcggtgcg gatcgtggcg gtgcagccgt
     2461 cgggcaagcg ccggctctcg cccctcgact gggcgaacgg ccgcggcgtg gcggtcggcg
     2521 accgattcga caccggcgcg gcccctcccg cgtagggaga gcgtgcccat ccgccagccg
     2581 gacctccgga cgcccgacgc cgtaccgcgc gtgcatgtcg tgacgaccga cgaggtcgtg
     2641 acgcgcgcgg acttcatcga cgtcgcgtgc ggcgtgatgg gggtgctggg cccccgcggc
     2701 gcgctgcacc tgcgcgccaa ccgggccacc ggggcgcggc tgcaggcgct gggcgagtcg
     2761 ctctcggcgg cccagcgggt cacgggggcc tggctcgtgg tgaacgaccg cgtggacgtc
     2821 gcgctggtcg tgcgggcgcg gggcgcccag ctcaccagcc actcgctcac cgccgcggac
     2881 gcgcggcgcg ccgcccccgc gctggccatc ggggcgagcg tgcacggcgt ggccgaaggg
     2941 gtggaggcgg cgcaggacgg cgcggactgg ctcgtggcgg gccgggtgtt cgccccggtc
     3001 acccatccgg gcgaggacgg ccgcggaatg gagttcgtcg aggggctcgt cgcggcggtg
     3061 cgggtgccgg tgatcgccat cggcggggtg cggcccaagc actgccgcgc gctgcggctg
     3121 gcgggggtgc acggcatcgc cgtcatccgt gggatctggg acgcgccgaa tgccgaacgg
     3181 gcggccagcg actatctttc ctgttatgaa gacgccggtg ttgcatgagc tgcctgcggc
     3241 gctgacggcc gacgccgcgc cgcgcgtccg cggcggtgag cgagtggctg gtgagctggg
     3301 cg
//
LOCUS       DASSYW010000453         2414 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_661782, whole genome shotgun sequence.
ACCESSION   DASSYW010000453 DASSYW010000000
VERSION     DASSYW010000453.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2414)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2414)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2414
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_661782"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..191)
                     /locus_tag="VFN38_07260"
     CDS             complement(<1..191)
                     /locus_tag="VFN38_07260"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HET9011599.1"
                     /translation="MELGLEGRVALISGASRGLGYAIARELALEGASVALVARGRDAL
                     EEAATALAAELGPGGSKRVL"
     gene            complement(191..>2414)
                     /gene="fdhF"
                     /locus_tag="VFN38_07265"
     CDS             complement(191..>2414)
                     /gene="fdhF"
                     /locus_tag="VFN38_07265"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR01591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009326 - formate dehydrogenase complex
                     [Evidence IEA];
                     GO_function: GO:0008863 - formate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_process: GO:0015942 - formate metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="formate dehydrogenase subunit alpha"
                     /protein_id="HET9011600.1"
                     /translation="SPWIEERTPNQGSTCVKGRFGTDFVLHRDRLTTPLVRRGWIREG
                     GRWRFDASGAEAARWPRRGGPWESIGGEGRTTKRRPKMNPLNTAPTGPSTLGDPRDRV
                     ATPAAWYEPFREATWEEAMEITAQQLERLRDERGPESLAVFASAKCSNEENYLLQRLF
                     RGALGTNNVDHCTRLCHSSSVSAMQRAMNTSAASGSMREVEHVSDVIFILGANTTESH
                     PVFGAAIKRALKRGATLIVADPRKIELASRADVHLQMLPGTDVALLNAMLNHVLALGL
                     EDRAFLAARTHDFDLVRQAVAPYTPEAAETITGVPAALIRRAAELYARGPNSATLWAM
                     GLTQHRTGTDIVTALLNLILGCGMIGRWGAPMMPIRGQNNVQGASDVGAIPMVYTDYQ
                     PVDDPAIRRVFAEAWDLPAERLSLTPGLKVTQIVGANSPVRGMYIMGENPIVSDPDVA
                     HAEEWFRDLEFLAVQDLFLTETARYADVVLPGGSFAEKDGTYVNTERRIQLARKAVEP
                     PGKARADIDILLDLSRRLHLPTPFRDAADVMDEIARVTPSWRGVSHARLADAAGLQYP
                     VPDASHPGTDFLFADRFPTDDGIARMVPVEFLPPAEMPDASFPFMLNTGRQMYHWHTG
                     TMTRRSHALDAREPTPIVELSPADAEEIGVRDGDAVIVRSRRGEIRIAVRLSERVARR
                     QVFIPMHYREAAANLLTNPALDPYAGIPEFKVCAVRVERAAVTAEATADGSARVAAHA
                     "
BASE COUNT          314 a          900 c          846 g          354 t
ORIGIN      
        1 agcacgcgct tcgagccccc cggacccagc tcggcggcga gtgcggtcgc ggcctcctcc
       61 agcgcgtctc gcccccgcgc gacgagcgcc accgacgcgc cctcgagcgc cagctcgcgg
      121 gcgatggcgt agccgagccc ccgcgacgcg ccgctgatca gcgctacccg tccctccagt
      181 ccgagctcca tcaggcgtgc gcggcgaccc gcgcgctccc gtcggccgtc gcctccgccg
      241 tcaccgccgc ccgctcgacg cgcacggcgc acaccttgaa ctccgggatc ccggcgtatg
      301 ggtcgagggc cgggttggtg agcaggttgg ccgccgcctc gcggtagtgc atcgggatga
      361 agacctgccg gcgcgcgacg cgctcggaga gccgcaccgc gatccggatc tcgccgcgcc
      421 gcgagcggac gatcacggcg tcgccgtcgc gcaccccgat ctcctccgca tcggcgggcg
      481 acagctcgac gatcggcgtc ggctcgcggg catcgagggc gtgggagcgc cgcgtcatcg
      541 tcccggtgtg ccagtggtac atctgccgtc ccgtgttgag catgaagggg aagctcgcgt
      601 cgggcatctc ggccggggga aggaactcca ccggcaccat gcgcgcgatg ccgtcgtcgg
      661 tcgggaagcg gtcggcgaac aggaagtcgg ttcccggatg cgacgcgtcg ggcaccggat
      721 actgcaggcc ggcggcgtcc gccagccgcg catgcgagac tccgcgccac gacggcgtga
      781 cccgcgcgat ctcgtccatc acgtccgccg cgtcgcggaa gggcgtcggc aggtgcaggc
      841 ggcgcgacag gtcgagcagg atgtcgatgt cggcccgcgc cttcccgggc ggctcgaccg
      901 ccttccgcgc cagctggatg cgccgctccg tgttcacgta ggtgccgtcc ttctcggcga
      961 acgagccgcc cggcaggacg acgtcggcgt agcgtgccgt ctcggtgagg aagaggtcct
     1021 gcacggccag gaactcgagg tcgcggaacc actcctcggc gtgcgccacg tccgggtcgg
     1081 agacgatcgg gttctcgccc atgatgtaca tcccccgcac cggactgttg gcgccgacga
     1141 tctgcgtgac cttgagcccc ggcgtcagcg acagccgctc cgcgggcagg tcccacgcct
     1201 cggcgaacac gcggcggatc gccggatcgt ccaccggctg gtagtcggtg tagaccatcg
     1261 ggatcgcccc gacgtcgctc gccccctgca cgttgttctg gccgcggatc ggcatcatcg
     1321 gcgcccccca ccgcccgatc attccacagc cgagaatcag gttgagcagc gcggtgacga
     1381 tgtcggtgcc ggtgcggtgc tgggtcagtc ccatcgccca cagcgtcgcc gagttcgggc
     1441 cccgggcata gagctcggcc gcccggcgga tcagcgccgc cggaacgccg gtgatcgtct
     1501 ccgccgcctc cggcgtgtag ggcgcgaccg cctgccgcac gaggtcgaag tcgtgcgtgc
     1561 gggcggccag gaaggcacgg tcctcgagcc ccagcgcgag cacgtggttg agcatcgcgt
     1621 tgagcagcgc gacgtcggtg ccgggcagca tctggaggtg cacgtccgcc cggctggcga
     1681 gctcgatctt tcgtgggtcg gcgacgatca gcgtcgctcc gcgcttgagc gcccgcttga
     1741 tcgccgcccc gaacaccggg tgcgactcgg tggtgttcgc gccgaggatg aagatgacgt
     1801 ccgagacgtg ctccacctcc cgcatcgacc ccgaggcggc gctcgtgttc atcgcgcgct
     1861 gcatcgcgct caccgacgac gagtgacaga ggcgcgtgca gtgatcgacg ttgttggtac
     1921 ccagcgcacc gcggaagagg cgctgcagga ggtaattctc ctcgttggag cacttggccg
     1981 aggcgaacac ggcgaggctc tccggccccc gctcgtcgcg cagccgctcg agctgctgcg
     2041 ccgtgatctc catcgcctcc tcccaggtcg cctcgcggaa gggctcgtac catgccgccg
     2101 gggtcgcgac gcggtcgcgc gggtcgccga gcgtggacgg gccggtcggc gccgtgttca
     2161 gcggattcat cttcggccgc cgcttcgtgg tccgcccctc accgccgatg ctctcccacg
     2221 gaccgccgcg gcgcggccag cgcgcggcct cggccccgct cgcgtcgaac cgccagcgcc
     2281 ccccctccct gatccagccc cgtcgcacga gcggtgtcgt caggcggtcc cggtgcagca
     2341 cgaagtccgt gccgaagcgc cccttcacgc acgtggagcc ctggttcggc gtgcgctcct
     2401 cgatccacgg gctt
//
LOCUS       DASSYW010000454         2870 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1713559, whole genome shotgun sequence.
ACCESSION   DASSYW010000454 DASSYW010000000
VERSION     DASSYW010000454.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2870)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2870)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2870
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1713559"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..692)
                     /locus_tag="VFN38_07270"
     CDS             complement(<1..692)
                     /locus_tag="VFN38_07270"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HET9011601.1"
                     /translation="MTRQEIGILLLLLVLCAIVATASPQFLSVVNLQNVARLVGTYGF
                     FSIGVGNVIITGGIDLSVGSICALLGVLLSMMLVEWHWPPAVALAAVLALGGALGAAH
                     GLLITRLGLQPFIVTLCGLLLYRGAARYVADDSTKGFGTGEGFEWVRALASGSVGGVP
                     MPFVVMIVVAAMAWVLLHRSVYGRHLFAVGHNAEAARYSGVGTKTVVAWAYALSGVLA
                     AVSAVIIAFYTNS"
     gene            complement(717..2225)
                     /locus_tag="VFN38_07275"
     CDS             complement(717..2225)
                     /locus_tag="VFN38_07275"
                     /EC_number="7.5.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HET9011602.1"
                     /translation="MTTGPRLKMSGISKRFPGVVALDRVDLTVAAGEIVGLVGENGAG
                     KSTLMKVLSGVHRADSGVIAIDGVPATLHGPADAARLGIAIIHQELELIETLDAAGNV
                     YLGREPHRGGPLRLLDRRRMEADTERHLARIGARIPAGTLVRRLSTAQQQFVAIARAL
                     SMNARILVLDEPTASLGSAEAERLHAVLRDLRGHGTAIVYISHRLREIEALADGAVVL
                     RDGRNAGVLPRGEITRDRLVQLMVGRTLEQAPRRPLEPAAGAALAIRLQLEGVRTGRY
                     PSAEVSLTAYAGEVLGVAGLIGAGRSELAEAICGVGTRRAGRVLLDGQPVAIHSPRDA
                     IRAGICLVPEDRRRRGVIGAMSVRENISLPALGSYARLGIVRRGAEARAADDIARMLT
                     VKASSNNAAVATLSGGNQQKVALGKWVARGPRVIVFDEPTQGVDVGAKAEIHRLVRRL
                     ADEGAAVIMISSDMEEIVAESDRVAVMHEGRITGILDRAACTPESIMQLAVA"
     gene            2291..>2870
                     /gene="galT"
                     /locus_tag="VFN38_07280"
     CDS             2291..>2870
                     /gene="galT"
                     /locus_tag="VFN38_07280"
                     /EC_number="2.7.7.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008108 - UDP-glucose:hexose-1-phosphate
                     uridylyltransferase activity [Evidence IEA];
                     GO_process: GO:0006012 - galactose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="galactose-1-phosphate uridylyltransferase"
                     /protein_id="HET9011603.1"
                     /translation="MAAHRQNRPWQGETAVTSDTRPPAYVEDCYFCPGNVRVSGARNP
                     DYQSVFVFDNDHPCVGADAPQRLEPPPGMYRNAPATGLARVVCYTPKHNSTLAELPAD
                     EITALIEAWREQYQELSSRSDIRHVLIFENKGEVVGVSNPHPHGQIYATNFVFKTIET
                     EVVASRRFYDEHRRVLFQEILRSEQADGRRILF"
BASE COUNT          466 a         1047 c          959 g          398 t
ORIGIN      
        1 gagttggtgt agaaggcgat gatgaccgcg gacaccgcgg caaggacgcc cgacaaggcg
       61 tacgcccacg ccacgaccgt cttcgtgccg acgcccgaat agcgggccgc ctcggcgttg
      121 tggccgacgg cgaagaggtg ccgcccgtac accgagcgat gcagcagcac ccaggccatc
      181 gccgccacga caatcatcac gacgaacggc atcggcacgc cgcccacgct tcccgacgcg
      241 agcgcccgca cccactcgaa gccctcgccg gtgccgaacc ctttggtgga atcgtcggcg
      301 acatagcggg cggcgccgcg gtacagcagc agaccgcaca gcgtgacgat gaacggctgc
      361 agccccaggc gcgtgatcag caggccgtgc gcggcgccca gggcgccgcc gagcgccagc
      421 accgcggcca gcgccacggc gggcggccag tgccattcga cgagcatcat cgacagcagc
      481 accccgagca gcgcgcagat cgaccccacc gagaggtcga tgccgccggt gatgatgacg
      541 ttgccgacgc cgatgctgaa gaagccgtag gtgcccacca gcctggcgac gttctgcagg
      601 ttcacgacgc tcaggaattg cgggctggcc gtggccacga tggcgcacag caccagcaac
      661 agcaggagaa tgccgatctc ttgtctggtc atgtcgaagt cgcggcgcgc cgccgctcag
      721 gctaccgcca gttgcatgat cgattcgggc gtgcacgccg cgcggtcgag aatccccgtg
      781 atgcgcccct cgtgcatcac cgccacgcgg tcgctctcgg cgacgatctc ctccatgtcg
      841 ctgctgatca tgatcacggc ggcgccctca tcggcgagcc gccggacgag ccggtgaatc
      901 tcggccttcg ctcccacgtc cacgccttgc gtgggctcgt cgaacacgat gacacgcggg
      961 ccgcgggcca cccacttgcc caacgccacc ttctgctggt tgccgccgct gagcgtcgcc
     1021 accgcggcgt tgttcgacga cgccttcacg gtcagcatgc gggcgatgtc gtcggcggct
     1081 cgcgcctcgg cgccgcgtct gacgatgccc agccgggcgt acgagccgag cgccggcagg
     1141 ctgatgttct cgcgcacgct catcgcgccg atgacgccgc gccggcgccg gtcctccggc
     1201 accaggcaga tcccggcgcg aatggcgtcg cgcggcgagt gaatcgcgac gggttggccg
     1261 tcgagcagca cacgcccggc gcgccgcgtc cccacgccgc agatcgcctc ggccagctcg
     1321 gagcgcccgg cgccgatcag gcccgcgacg ccgaggacct cccccgcgta ggcggtcagc
     1381 gacacctcgg ccgacgggta ccgcccggtg cggacacctt cgagctgcag ccgtatcgcc
     1441 agggcggcgc ccgcggcggg ctccagcggc cggcgtgggg cctgctcgag ggttcggccg
     1501 accatcagct ggaccagtcg atcgcgcgtg atctcgccgc gcggcaacac gccggcgttg
     1561 cggccgtcgc gcagcaccac cgcgccgtcg gcaagcgcct cgatctcccg caaccggtgc
     1621 gagatgtaca cgatggcggt gccgtgcccc cgcagatcgc gcagcaccgc atgcagccgc
     1681 tcggcttcgg ccgaccccag gctggcggtc ggctcgtcga gcaccaggat gcgggcgttc
     1741 atcgacagcg cgcgggcgat cgccacgaac tgctgctgcg cggtggacag ccgccgaacg
     1801 agcgtgcctg ccgggattcg cgcgccgatt ctggcaaggt gccgctcggt gtccgcttcc
     1861 atcctccgtc gatcgagcag ccgcagcggt ccgccacggt gcggctcgcg gccgagatag
     1921 acgttgccgg ccgcgtcgag cgtctcgatc agctcgagct cctgatggat gatggcgatg
     1981 cccagacgcg ccgcgtcggc ggggccgtgc agggtggccg gcacgccgtc gatcgcgatg
     2041 acgcccgagt cggcgcgatg cacaccgctc agcaccttca tcagcgtgga cttgccggcg
     2101 ccgttctcgc cgaccagccc gacgatctcg ccggcggcca ccgtgaggtc cacccgatcg
     2161 agcgccacga cgccgggaaa ccgcttcgaa atgcccgaca tcttgagccg aggaccggtc
     2221 gtcaatggtg agctccgatg cggtggcgtg ggaacagcga tggcaccctc ttcgcgagga
     2281 gtgggtcatc atggccgctc atcgccagaa ccgtccgtgg cagggggaaa ccgccgtgac
     2341 atccgacacg cggccaccag cctacgtcga ggactgctac ttctgtcctg gcaacgtgcg
     2401 cgtgagcggc gcgcgcaacc cggactacca gtcggtgttc gtcttcgaca acgatcatcc
     2461 ctgtgtcggc gcggacgcgc cccaacggct cgagccaccg cccggcatgt atcggaacgc
     2521 gccggcgacg ggactggcgc gcgtagtgtg ctacacgccg aagcacaaca gcacgctggc
     2581 cgagttgccg gccgacgaga tcacggcgct gatcgaggcg tggcgcgaac aatatcagga
     2641 gctcagctcg cgctccgaca tccggcacgt gctcatcttc gagaacaaag gcgaagtcgt
     2701 cggcgtgtcg aacccccatc cgcacgggca gatctacgcg accaacttcg tcttcaaaac
     2761 catcgagacc gaagtcgtgg cgagccggcg cttctacgac gagcaccgcc gcgtgctctt
     2821 ccaggagatc ctgcggtccg agcaggcgga tggccgccgc attctgttcg
//
LOCUS       DASSYW010000455         2580 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1566082, whole genome shotgun sequence.
ACCESSION   DASSYW010000455 DASSYW010000000
VERSION     DASSYW010000455.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2580)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2580)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2580
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1566082"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..196)
                     /locus_tag="VFN38_07285"
     CDS             complement(<1..196)
                     /locus_tag="VFN38_07285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011604.1"
                     /translation="MDAAPSQAAATAALPAVAPRLPTDRWRAAEVAFWLVALTAFFVF
                     PNHRVLGSQILITGLFAVSLD"
     gene            complement(180..1046)
                     /locus_tag="VFN38_07290"
     CDS             complement(180..1046)
                     /locus_tag="VFN38_07290"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015658 - branched-chain amino acid
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HET9011605.1"
                     /translation="MIGNLAGVLFDGVAYGSLLFIISIGLSVTMGLMNFVNLAHGAFA
                     MLGGYVCVLLMTRAGVPFLATLPAAFVVSAAAGIVLERLLYQRLYRAAHLDQVMFSIG
                     LVFMAVAATTYFFGPSQQPVRLPEFLRGQVHVLGLDLSAYRIFLIAIVAALTVALHLL
                     LVRTRFGAQVRASVDNAVASAGLGINVNRVFAVTFALGSGLAGLGGGLGVDVLGLDPT
                     FPLKYMVYFLFVVATGGAGTIKGGLVAAMILGVCDVAGKYYVPQVGSFIIYFLMVTLM
                     ILFPAGLYGRRA"
     gene            complement(1153..2448)
                     /locus_tag="VFN38_07295"
                     /pseudo
     CDS             complement(1153..2448)
                     /locus_tag="VFN38_07295"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
     gene            complement(2388..>2580)
                     /locus_tag="VFN38_07300"
     CDS             complement(2388..>2580)
                     /locus_tag="VFN38_07300"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HET9011606.1"
                     /translation="DWAPTHQHEEMAALVPGARLVVIEGCGHMSPMERPREVAEAMLA
                     WLRSHTHPYPRTQAPATAH"
BASE COUNT          434 a          879 c          876 g          391 t
ORIGIN      
        1 ggtcgagcga aacggcgaac aaaccggtaa tcaggatctg gctgccgagc acgcggtggt
       61 tcgggaacac gaagaacgcc gtgagcgcga ccagccagaa ggcgacttcg gccgctcgcc
      121 agcggtcggt gggcaggcgc ggagcgaccg ccggcagcgc cgccgtggcg gctgcctgac
      181 taggcgcggc gtccatagag gccggccggg aagagaatca tcagcgtcac catcaggaaa
      241 tagatgatga aggagccgac ctgcggcacg taatacttgc cggcgacgtc gcagacgccg
      301 aggatcatcg ccgcgacgag tccgcccttg atcgtgcccg cgccgccggt cgcgacgacg
      361 aacaggaagt acaccatgta cttgagcggg aacgtcggat cgagcccgag cacgtcgacg
      421 ccgaggccgc cacccagccc cgcgagcccc gagccaagcg cgaaggtgac ggcgaaaacg
      481 cggttcacgt tgatgccgag gcccgcggac gccaccgcgt tgtcgacgga tgcgcgcacc
      541 tgggcgccga agcgcgtgcg aacgagcagc agatggagcg ccaccgtcag cgccgccacg
      601 atggcgatca ggaagatgcg gtaggcactc aggtcgagcc cgagcacatg cacctgcccg
      661 cgcaggaact cgggcaggcg caccggctgc tgcgacgggc cgaagaaata cgtcgtcgcc
      721 gcgacggcca tgaacacgag gccgatcgag aacatcacct ggtcgaggtg cgcggctcgg
      781 tagaggcgct ggtagagcag ccgctcgagc acgataccgg ccgccgcgga cacgacgaac
      841 gcagccggga gcgtcgcgag gaacggcacg cccgcgcgcg tcatcagcag cacgcagacg
      901 tagccgccca gcatggcgaa cgcgccgtgc gcaaggttga cgaaattcat cagccccatc
      961 gtcaccgaca gcccgatgct gatgatgaac agcaggctgc cgtacgcgac gccgtcgaac
     1021 agcaccccgg cgagatttcc gatcatgcct cgcgcacctg gctcaagccg aagcggacgg
     1081 cgaccgacgg gccgcccctg ggtcgccgcg ccccctgggg gagacgcgcg cgagcgcgct
     1141 tcgggcgcag cctcagttac ccggatcctt cgcgttctcg aacttgtcga attcgacgtt
     1201 ccatggcttg ccgttgacca tcttcacttc gcgcaggtag acggtctgga tcggctgcct
     1261 cgtggcggga tcgatcgaga gcgggccgcg cggactcgtc cacttcatgc ccttcatcgc
     1321 ctcgaccagc tgctcgcccg tcgcgttcgg acccgccttc ttgagcgctt cgtagatgag
     1381 gtgcatgccg tcgtagccgc cgaccgagtg gaaattcgga cgcatcccgt tgttcgcctt
     1441 catgaacgcg tcgacgtacg ccttgttctc gggcgagtcg tgggcggccg agtagtggaa
     1501 cgacgtgatg actccgacgg ccggcgcgcc catcgcttcc agcaggtcgt cgtcggtcac
     1561 gtcgcccgtg ccgatcagct tgacgcccgc ctgcttgagg ccgcgctcgt cgaactgctt
     1621 catcacggcg agcccctcgc ccgaaggcac gaacacgaac agcgcgtccg gcttcgcgtc
     1681 cttcgcgcgc tgcaggaacg gcgcgtagtc cggattgcgc agcggcgtgc gcacggcctc
     1741 gacgatctcg ccgcccaacg ccttgaattt ctcggcgaac gtcttctcgg aatcgaggcc
     1801 cggcgcgtag tccgtcacca gcgagaacac gcgcttgatc ttgttcttct acgcccaggt
     1861 cgcgatcggc gcggtgttct gcggcagcgt gaagccggtg cgcacgatga acggcgagcg
     1921 ctgcgggatg acctgcgtgc cggccgccat cacgaccatc ggcaccttcg cctccgtcgc
     1981 gacgggcgct gcggcgagcg caagcggcgt gagcccgaag cccgcgagca cgctgacctt
     2041 gtcctgcacg acgagctcct gcgcgatgcg cttggtcgtc tcgggcgcga gaccggtgtc
     2101 gtccttgacg atgagctcga tcttgcgtcc cgcgaccgtg tcgccgttct tcgccatgta
     2161 caggcgcgcc gccgcctcga tctgcttgcc cgtcgatgca aacgggccgg tcagcggcag
     2221 gatcagcccg atcttgaacg gatcggcggc aagcgcggtg ccggcgaacg cgccgagcgc
     2281 cgcggcgacc gcgaggccct ggagcgcgcg gcggcgcgag gtgcggtgcg gatggttcat
     2341 cgattcctcc ttgtcggtgg gttgaattcg agcgtcgtgc cgatgcttca gtgcgcggtc
     2401 gccggagcct gggtccgcgg ataggggtgt gtgtgactgc gcagccatgc gagcatcgcc
     2461 tccgcgacct cgcgcggccg ctccatcggc gacatgtggc cgcagccttc gatcacgacg
     2521 agccttgcgc cgggaacgag cgccgccatc tcctcgtgct gatgcgtcgg cgcccagtca
//
LOCUS       DASSYW010000456         2720 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_295866, whole genome shotgun sequence.
ACCESSION   DASSYW010000456 DASSYW010000000
VERSION     DASSYW010000456.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2720)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2720)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2720
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_295866"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..375)
                     /locus_tag="VFN38_07305"
     CDS             complement(<1..375)
                     /locus_tag="VFN38_07305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011607.1"
                     /translation="MLRNVRARVLVWVGFGLCAAVGGQGLLAGQPQAPQEAPPPRPIN
                     ESADPILKPFRWRQIGPAVMGGRVDDIAVDESNPSVIYVGYATGGVWKTTNNGTTWGP
                     IFDEYPVSSIGDIEIAPSNPNII"
     gene            complement(505..1020)
                     /locus_tag="VFN38_07310"
     CDS             complement(505..1020)
                     /locus_tag="VFN38_07310"
                     /inference="COORDINATES: protein motif:HMM:NF015944.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LemA family protein"
                     /protein_id="HET9011608.1"
                     /translation="MTLSGCSYNRFTSQEEAIKTAQSEVQNQLQRRNDLIPNLVETVK
                     GYASQERDIFTAIAESRARMMNAKTPDEQIEAANAQTAALGRLLVVVENYPQLKSDAN
                     FQRLMDELAGTENRIAVARQRYNDAAREYNTLRRSFPSNVTAKMFGFKEYKYYEAPPE
                     AQKLPKVDFSR"
     gene            complement(1264..2058)
                     /locus_tag="VFN38_07315"
     CDS             complement(1264..2058)
                     /locus_tag="VFN38_07315"
                     /inference="COORDINATES: protein motif:HMM:NF016424.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TPM domain-containing protein"
                     /protein_id="HET9011609.1"
                     /translation="MIALAALLAISSTPASAQTPPLLTAPVNDFANVIDPASERELER
                     RILALQKATTDVVAVATVPTFKPAGSIDEYAVKMFENGGRGIGMKGKDNGLLIVVAVD
                     DRRVKVEVGYGLEGYVTDGYAGQTIRELMLPAFKTGQYGQGLVAGTTRLINRVAEQQG
                     VTLTDVPPSPSVQQPRQQPDGGGFPFGLIVFVIILILMMSRRRRRRRRHWGVGPWSGW
                     NSGVGPFGGGGFGGGFGGFGGGGGGGGGFGGFGGGRSGGGGASGGW"
     gene            complement(2121..>2720)
                     /locus_tag="VFN38_07320"
     CDS             complement(2121..>2720)
                     /locus_tag="VFN38_07320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011610.1"
                     /translation="RALHGLALVESLTFDDLQQLVPLAMGWQKLGLAVPLILPHHEFL
                     RTLDAFPLEYGNIIANHVVLAGDTPFGDARVSDADRRRGCEREAKSHVIHLREGFLET
                     GGDARRVADLIAASAAPFRSVLDNIIRLEHGSSSRADLDDEELAREAAAVIGVSAPLV
                     VEVLAAPRGSSTVADPSALFARYLDASERVWRFVDGWTS"
BASE COUNT          423 a          935 c          920 g          442 t
ORIGIN      
        1 gatgatgttc gggttcgacg gggcgatctc gatgtcgccg atcgacgaga ccgggtactc
       61 gtcgaagatc ggcccccagg tcgtgccgtt gttcgtggtc ttccacacgc cgccggtggc
      121 gtagccgacg tagatcacgg atggattgct ctcgtcgacg gcgatgtcgt cgacgcggcc
      181 gcccatgacc gccggcccga tctgtcgcca gcggaaaggc ttcaggatgg gatcggcgga
      241 ctcgttgatc ggacgcggcg gcggtgcctc ctgcggcgcc tgcggctgtc cggcgagcag
      301 gccctggccg cccacggccg cacagaggcc aaagccgacc cacacgagca cacgggcgcg
      361 cacgtttcgc agcattccac cttctccttg gttgctgtgg tctgcgccgg gcgatgcggt
      421 ccgcggcctt ggccgcggcc gcccgcgccg gctaccccga tggcaggatt gtaggcgaac
      481 ttacgccgaa gcgcgggaga tcgcttaccg gctgaaatcg accttcggca gtttctgcgc
      541 ctcgggcggc gcttcgtagt acttgtactc cttgaaaccg aacatcttcg ccgtcacgtt
      601 ggacgggaag ctgcggcgca gcgtgttgta ctcgcgcgcc gcatcgttgt agcgctgccg
      661 cgcgaccgcg atgcggttct ccgtgcccgc gagctcgtcc atcaggcgct ggaagttcgc
      721 atccgacttg agctgcggat agttctcgac gacgacgagc aggcggccga gggcggcggt
      781 ctgcgcgttg gccgcctcga tctgttcgtc gggcgtcttg gcgttcatca tccgcgcgcg
      841 cgactcggcg atagccgtga agatgtcgcg ctcctggctc gcatagccct tgaccgtctc
      901 gacgaggttg gggatcaggt cgttgcggcg ctgcagctgg ttctgcactt ccgactgcgc
      961 cgtcttgatc gcttcttcct gggacgtgaa ccggttgtag gagcagccgg acaatgtcat
     1021 cgccaccaac acaacggcgg cggctcgcag gggaggggta gaaagcatga cacagtctcc
     1081 agtcgttggt cgtcggtcgt cagtcggtcg tcagtcgtca gtcggtcgtc agtcgtcagt
     1141 cgtcactcgt caagtcggtc cttgctgatt gcgtgccaat caacaatgac aaatcgtccc
     1201 tgatcgattc aatcctcaat cacaagtctt caatcacgaa atcatgagcg ctcgccgaca
     1261 ggctcaccat ccgccggaag cgccgccgcc gcccgagcgg ccgccgccga agccgccgaa
     1321 cccgccgccg ccaccaccgc cgccgccaaa acccccgaag ccgccgccaa agccgccgcc
     1381 gccgaacggg ccgacgccgc tgttccagcc gctccacggg ccgacgcccc agtggcgccg
     1441 ccgccgccgc cggcggcgcg acatcatcag gatgagaatg atgacaaaga cgatgagccc
     1501 gaacgggaag ccgccgccat ccggttgctg ccgcggctgc tgcacggagg gcgacggcgg
     1561 cacgtccgtc agcgtcaccc cctgctgctc ggccacgcgg ttgatcaacc gcgtcgtgcc
     1621 ggcgacgagc ccctggccgt actggccggt cttgaacgcc ggcagcatca actcgcggat
     1681 cgtctgcccg gcgtagccat cggtcacgta gccctcgagg ccgtagccca cctcgacctt
     1741 gacgcgccga tcgtcgacgg cgacgacgat gagcagcccg ttgtccttcc ccttcatgcc
     1801 aattccgcgg ccgccgttct cgaacatctt caccgcgtac tcgtcgatcg aacctgccgg
     1861 cttgaacgtc ggcacggtgg cgacggcgac gacgtcggtg gtggctttct gcagcgccag
     1921 gatgcggcgc tcgagttccc gctcgctggc cgggtcgatg acgttggcga agtcgttgac
     1981 cggagcggtg aggagcggcg gcgtctgtgc ggatgccggc gtggaggaga tggcgagcag
     2041 cgcggcgagc gcgatcacgg cgagccgcgc gcgcggccgc gagccatgcc tcgcgaaccc
     2101 gcgactcccg ccgggagcgg tcacgacgtc cacccgtcga cgaaccgcca cacccgctcg
     2161 ctcgcgtcga gatagcgggc gaagagcgcg gacgggtccg cgaccgtcga cgatccgcgc
     2221 ggcgcggcga ggacttcgac gacgagcggc gccgagacgc cgatcaccgc ggccgcctcg
     2281 cgcgcgagct cttcgtcgtc gaggtccgcc cgggaggacg agccgtgctc gaggcggatg
     2341 atgttgtcga gcacgctccg gaatggcgcc gcggaggcgg cgatgagatc cgcgacgcgc
     2401 ctcgcgtcgc cgccggtctc gagaaacccc tcgcgaaggt ggatgacgtg actcttggct
     2461 tcgcgctcgc agccgcgccg ccggtctgca tcggacacgc gcgcatcccc gaacggcgtg
     2521 tcgccggcga gcaccacgtg gttggcgatg atgttgccgt actcgagcgg aaaggcgtcg
     2581 agggtccgca gaaattcgtg gtgcggcagg atcaacggca ccgccaggcc gagcttctgc
     2641 caccccatcg cgagcgggac gagctgctgg agatcgtcga acgtcaggct ctcgacgagc
     2701 gcaaggccgt gcagggcgcg
//
LOCUS       DASSYW010000457         4526 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1234540, whole genome shotgun sequence.
ACCESSION   DASSYW010000457 DASSYW010000000
VERSION     DASSYW010000457.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4526)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4526)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4526
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1234540"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1171
                     /locus_tag="VFN38_07325"
     CDS             <1..1171
                     /locus_tag="VFN38_07325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011611.1"
                     /translation="GGDITPPSEPPPYAAPTAMAVLGRGDFAPQRTTAEVAVRGTTAY
                     TTTWGNSAAVASVFYIWDVAGDVPALLDSVKVENATTLGDVAISDDGSLLVIATERAG
                     GGLAIYDLADPRHPTPVARYITANTTAGVHTAEIGRVNGKLYGFLSIDPTPTQAARIV
                     IVDLSVPAAPVEVYTRPIGTPYVHDTFVRDGLLYLALWNDGVAIWDIGGGGRGGSPAA
                     PIELGRVRTANGEVHNIWWLKDPVTNVTRYAFIGQEGPGSVGVSSSGDVHVVDVSVPS
                     TPREVAFYSVTGAGTHNFSVDEANGILYAAYYEGGVRALDVRGDLGTCLDSQRSSPDG
                     ATFLCDLRKMGREIAVGLVDRPTPVFVWGVQYLDGAVYASDMLNGLWKLRAASRP"
     gene            1271..2902
                     /locus_tag="VFN38_07330"
     CDS             1271..2902
                     /locus_tag="VFN38_07330"
                     /inference="COORDINATES: protein motif:HMM:TIGR00225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HET9011612.1"
                     /translation="MLRPRTAAVASLLLIPMVAGGFFLQQTPPRATPRLFDQVMSIVA
                     SRYVDSLQSGEVFEKAARGLVRELNDPYSELLAPRQSEEFNRSTGGRYGGVGMLLEEQ
                     KVGNGTSIVVSRIFPHTPAENGGVHEGDRIVRVDSLPTADAKIDKVSDALRGIAGTSV
                     EVTFQRPGVAEPVKLSFRRAIIHVPAVPYATMVGDQIGYIPLQTFNENTADEVEAAAA
                     KLVALGARGLVLDLRDNGGGIVEQALAVSSLFLRAGQPIVNVRSRNAPDEIARATSDQ
                     LSSQPPLVILTDGGTASASEIVAGALQDHDRALVLGTTSYGKGLVQSLFPLDEGYALK
                     ITTGKWYTPSGRSIHRERKLLADGRYVEARPDSLETESQKKARPVYRSDAGRTVYGGG
                     GITPDVIVPDDTLLTTEQEFLRSLAPKAQPFVTALNQYAFELKPVAARDFTITPAWRA
                     ELRRRLDVAGITIDQKYEPAATRILDRELDRRLSRLVLGDAGARQRSVGEDHQLARAL
                     ALLSGARSQEALFAAGRASPRTAAGLAAPLKPDRR"
     gene            2916..3524
                     /locus_tag="VFN38_07335"
     CDS             2916..3524
                     /locus_tag="VFN38_07335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011613.1"
                     /translation="MGAEARATLRIGRQSFEGMALLETDELRFRGDTRLRIALRDVSL
                     VSALDGTLRIEHANGIASFVLGDAAAVWAEKIRSPRTLADKLGVTRGMRVAVIDVADT
                     EVLADLAAKGAELVTGSVPQDVPLVLFRVDRPSQLAMLGALAQRIARNGAIWVVHPRG
                     DAAVADLVIFAAAREAGLTYTKVVRFSEHDTAEKLVIPRAAR"
     gene            3560..4279
                     /locus_tag="VFN38_07340"
     CDS             3560..4279
                     /locus_tag="VFN38_07340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011614.1"
                     /translation="MTESRVASAAEPTITPHALVVPRTARYYTLGPTHGFPRELWFVC
                     HGYGQLAGRFLRQFAPLDDGTRLVVAPEALSRFYLDPIPQRRNDPSPRIGASWMTRED
                     RGAEIADYVAYLERLSAEIRHPLAGAAPRIVVLGFSQGTATVSRWLAASELRVDQLVL
                     WAGTIPPELDLSSWSARLHGAAITLVVGDRDELATPAAVTADAERLSAAGVAFTVLRY
                     DGNHSIDPAALTRLAEGFAGR"
     gene            complement(4301..>4526)
                     /locus_tag="VFN38_07345"
     CDS             complement(4301..>4526)
                     /locus_tag="VFN38_07345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011615.1"
                     /translation="YEHVVIVRAVSERRGPAAVAATLYEETDASRAARAKLSEQLRMA
                     PAAFIYEDKGRPTKRDRREIDRFRDERRHD"
BASE COUNT          629 a         1651 c         1614 g          632 t
ORIGIN      
        1 cggcggtgac atcacgccac cgtcggagcc tcccccgtac gccgcaccca ccgccatggc
       61 ggtgctcggt cgcggtgact tcgcgccgca gcgcaccacc gccgaggtcg cggtgcgcgg
      121 cacgacggcc tacacgacca cctggggaaa cagcgccgcc gtcgcgagcg tgttctacat
      181 ctgggacgtc gcgggcgacg tgccggccct gctcgattcc gtgaaggtgg agaacgcgac
      241 caccctcggc gacgtcgcca tctccgacga cggatcgctg ctcgtgatcg ccaccgagcg
      301 cgccggaggc gggctggcga tctacgacct ggccgacccg cgtcacccca ccccggtcgc
      361 ccgctacatc acggccaaca ccacggccgg ggtgcacacg gccgagatcg ggcgggtgaa
      421 cgggaagctc tacggcttcc tctccatcga cccgaccccg acccaggcgg cgcggatcgt
      481 catcgtggat ctcagcgtac ccgccgcgcc ggtggaggtg tacacccggc cgatcggcac
      541 tccgtacgtg cacgacacct tcgtccgcga cggactcctc tacctcgcgc tctggaacga
      601 cggagtcgcc atctgggaca tcggcggggg tggacggggc ggcagccccg ccgcgccgat
      661 cgagctcggt cgggtgcgca cggcgaatgg agaggttcac aacatctggt ggctcaagga
      721 cccggtcacg aacgtcacgc gctacgcctt catcggccag gagggacccg gctcggtggg
      781 cgtctcctcc tcgggcgacg tgcacgtggt ggacgtgagc gtgccgagca cgccgcgcga
      841 agtggcgttc tacagcgtga ccggggccgg aacgcacaac ttctcggtgg acgaagcgaa
      901 cgggatcctg tacgccgcgt actacgaggg cggcgtgcgg gcgctcgacg tccggggcga
      961 cctcggcacc tgcctcgatt cgcagcggtc cagccccgac ggcgcgacct tcctctgtga
     1021 cctgcgcaag atggggcggg agatcgccgt cggcctggtc gatcgaccca cccccgtgtt
     1081 cgtctggggg gtccagtacc tcgacggggc ggtttatgca tccgacatgc tgaacggact
     1141 ctggaagctt cgcgcggcga gccggccctg accccccggc ggccgtctgg ccggggccac
     1201 cggttccgtt agattcctct caccgggcgc acccccctgc gcccggctct tcccctcgag
     1261 gtcgaaggca atgctccgtc cacgcaccgc ggccgtcgct tcgctgctcc tcatcccgat
     1321 ggtcgccggg gggttcttcc tccagcagac ccccccgcgt gcgaccccgc gcctgttcga
     1381 ccaggtgatg tcgatcgtcg cgagccggta cgtggattcg ctgcagagcg gcgaggtgtt
     1441 cgagaaggcg gcccgggggc tggtgcgcga gctcaacgat ccctacagcg agctgctcgc
     1501 gccgcgacag agcgaggagt tcaaccggag cacgggcggc cggtacggcg gggtgggcat
     1561 gctgctcgag gagcagaagg tggggaacgg caccagcatc gtcgtgtcgc gaatcttccc
     1621 gcacacgccc gcggagaacg gcggcgtgca cgagggcgac cggatcgtgc gcgtggattc
     1681 gctccccacc gcggacgcga agatcgacaa ggtgtccgac gcactccgcg gcatcgccgg
     1741 cacgagcgtg gaggtcacct tccagcggcc cggcgtggcc gagccggtga agctgtcgtt
     1801 ccggcgcgcc atcatccacg tgccggcggt gccgtacgcc acgatggtgg gcgaccagat
     1861 cggctacatc ccgctgcaga cgttcaacga gaacacggcc gacgaggtcg aggccgcggc
     1921 ggcgaagctg gtggcgctgg gcgcccgcgg gctcgtgctc gacctgcgcg acaacggcgg
     1981 gggcatcgtg gagcaggcgc tcgccgtgag ctcgctcttc ctccgcgccg gccagcccat
     2041 cgtcaacgtg cggtcgcgca acgcgccgga cgagatcgcc cgcgcgacga gcgaccagct
     2101 gtcgtcgcag ccgccgctcg tcatcctcac cgacggtggc acggcgtccg cgagcgagat
     2161 cgtcgcgggc gcgctccagg accacgatcg cgcgctggtg ctcggcacga cgagctacgg
     2221 caaggggctg gtccagtcgc tcttccccct cgacgaaggc tacgcgctca agatcacgac
     2281 ggggaagtgg tacaccccga gcgggcgcag catccatcgc gaacggaagc tgctcgccga
     2341 cggccgctac gtggaggcgc gtccggattc gctcgagacg gagtcgcaga agaaggcgcg
     2401 ccccgtctac cgctccgatg cggggcgcac cgtgtacggc gggggcggga tcacccccga
     2461 cgtcatcgtg cccgacgaca ccctgctcac cacggagcag gagttcctcc gctcgctcgc
     2521 gcccaaggcg cagccgttcg tgacggcgct gaaccagtac gcgttcgagc tgaagccggt
     2581 ggcggcgcgg gacttcacca tcacgccggc gtggcgcgcg gaactgcggc gccggctcga
     2641 cgtcgccggc atcacgatcg accagaagta cgagccggcg gcgacccgga tcctcgatcg
     2701 cgagctcgat cggcgcctga gccgcctggt gctcggcgac gcgggcgccc gccagcggtc
     2761 cgtgggcgag gaccatcagc tggcgcgcgc gctggcgctg ctctcggggg cgcggtcgca
     2821 ggaagcgctg ttcgccgcgg gccgcgcctc gccacgcacg gcagcgggcc tcgccgcgcc
     2881 gctgaagccg gaccgtcggt aggatcgcgg tctccatggg cgccgaagcg cgggcgacgc
     2941 tgaggatcgg gcggcagtcg ttcgagggga tggcgctgct cgagaccgac gagctgcgct
     3001 tccgcgggga tacccggctg cgcatcgcgc tgcgcgacgt ctccctcgtg agcgcgctgg
     3061 acggcacgct gcggatcgag cacgccaacg gcatcgcctc gttcgtgctc ggcgacgcgg
     3121 ccgcggtgtg ggccgagaag atccgctcgc ctcgcacgct cgccgacaag ctgggggtga
     3181 cacgcggaat gcgcgtggcg gtgatcgacg tcgccgacac cgaggtcctc gcggatctcg
     3241 ccgccaaggg ggccgagctc gtgacgggga gcgtgccgca ggacgttccg ctcgtgctct
     3301 tccgcgtcga ccggccgtcg cagctcgcga tgctcggcgc gctcgcccag cgcatcgcgc
     3361 gaaacggcgc gatctgggtg gtgcacccgc ggggcgacgc ggccgtcgcc gacctcgtga
     3421 tcttcgccgc cgcccgcgag gctggcctca cctacaccaa ggtggtacgc ttctcggagc
     3481 acgacacggc ggagaagctc gtcatcccgc gcgcggcgcg ctgagcgtca ccggacccgg
     3541 tcgagcagcc cagccatcca tgaccgaatc acgcgtcgcc agcgccgctg agccgacgat
     3601 cacgccgcat gcgctcgtcg tgccgcgcac ggcgcgctac tacaccctcg gacccacgca
     3661 cggctttccg cgcgagctct ggttcgtgtg ccacggctac ggacagctcg ccggccgctt
     3721 cctgcggcag ttcgcgccgc tcgacgacgg cacccgcctg gtggtggcgc ccgaagcgct
     3781 gtcgcgcttc tatctcgatc ccatcccgca gcgccgcaac gatccctcgc cgcgcatcgg
     3841 cgcgagctgg atgacgcgcg aggaccgcgg cgcggagatc gccgactacg tggcgtatct
     3901 cgagcgcctc tcggccgaga tccggcatcc cctcgccggg gccgcgccgc gcatcgtcgt
     3961 gctcgggttc tcgcagggca cggcgacggt gagccgctgg ctggcggcga gcgagctgcg
     4021 cgtcgaccag ctggtgctct gggcgggcac gatcccgccg gagctcgatc tctcctcgtg
     4081 gtccgcccgc cttcacggcg cggcgatcac gctggtggtc ggagaccgtg acgagctggc
     4141 gacgccggcg gcggtgacgg cggacgccga gcggctctcg gcggcgggcg tcgcgttcac
     4201 cgtgctgcgc tacgacggga accactccat cgatcccgcg gcgctgacgc ggctggccga
     4261 gggcttcgcc ggccggtgag cgggcggcgc ggcgcgcgcc tcagtcgtgc cggcgctcgt
     4321 cgcggaagcg atcgatctcg cgccggtccc gcttcgtcgg ccgccccttg tcctcgtaga
     4381 tgaacgcggc cggcgccatg cgaagctgct ccgagagctt cgcccgggcc gcgcggctcg
     4441 cgtcggtctc ctcgtacagc gtcgccgcca cggcggcggg gccgcggcgc tccgagacgg
     4501 cgcggacgat cacgacgtgc tcgtac
//
LOCUS       DASSYW010000458         2634 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1805661, whole genome shotgun sequence.
ACCESSION   DASSYW010000458 DASSYW010000000
VERSION     DASSYW010000458.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2634)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2634)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2634
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1805661"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1152
                     /locus_tag="VFN38_07350"
     CDS             <1..1152
                     /locus_tag="VFN38_07350"
                     /inference="COORDINATES: protein motif:HMM:NF024180.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAT domain-containing protein"
                     /protein_id="HET9011616.1"
                     /translation="SYVWVLDRQSLQTYRLAPRAEIEQAARHAYELVTSRATNVPRET
                     AAARARRIAASDAALPAALRRVSDLVLAPITAFPTTTRLLVVADGALQYLPFEMLPAP
                     RRAQAPPLVVDFEITALPSASTLAVHRTQLARRPMPTKGVAVFADPVFTASDARVQLT
                     ASRVASAAPAASDAQTRLLTQTDDTATPGFGNIARLRFTDDEAKAILAAAQGRQNLSA
                     IGFDATKAAAVDQGLGAYRYLHFATHGFLDTARPSLSAIALSLVGPDGTPQEGFLRAH
                     ELYNLNLSADLVVLSACETGLGKEIRGEGLIGLTRAFMYAGAARVIVSLWSVCDRATS
                     SLMSRLYREMLRNGRTPAASLRAAQLALRSDARWRHPYYWAAFTIQGDL"
     gene            1362..>2634
                     /locus_tag="VFN38_07355"
     CDS             1362..>2634
                     /locus_tag="VFN38_07355"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HET9011617.1"
                     /translation="MARRISLIVAALICLSSGVAGAQERFGGLAGTVTDETKGALPGT
                     TVTATNVETGAQRVVVSSADGSYRVPDLEPGRYSVAFELDTFQKVVMNDVLVLLGRTV
                     GVDAQMKVGGIQEALTVTADSAKQLDLTKVTLAHNITAEEFDRLPKARSFQGLALTAP
                     GVNAGEIEGGLQVNGASAAENQFTVDGVAINSLIYGNSRQNTVFEYLQEVQVKTGGID
                     AEYGGALGGVVSAVTKSGGNTFSGETHYYYIGSALSAGPFKRLQLDPNTLATAAYYQD
                     EKQSNNQSEFGGSLGGPIVKDKLFFFGSVSPRVVRRTNEYLFSAGTEPGEISQKQTAW
                     QGFGKVTYAANKVHANASLLMTPTRSEGRLPAYDGTGTNWLTTSAAANQAETTRGFEG
                     DQNNFSSNVDIWLRNNSYLSARAGYFYDAYKD"
BASE COUNT          459 a          922 c          844 g          409 t
ORIGIN      
        1 agctacgtct gggtgctcga tcgccagagc ctgcagacct atcgcctcgc gccacgagcg
       61 gagatcgagc aggccgcgcg tcacgcgtac gagctggtga cgagccgcgc gacgaacgtg
      121 ccgcgcgaaa cggcggccgc acgcgcccgg cggatcgcgg cgtcagacgc cgccctgccg
      181 gccgcgctcc ggcgcgtcag cgatctcgtc ctggcgccga tcaccgcctt ccccacgacc
      241 actcgcctgc tcgtcgtggc cgacggagcc ttgcaatacc tgccgttcga gatgctgccg
      301 gctccacgcc gcgcgcaggc gccgccgctc gtcgtggact tcgagatcac ggcgctcccg
      361 tcggcgtcca cgctcgccgt gcaccgcacg cagctcgcgc ggcgtcccat gcccacgaag
      421 ggcgtcgccg tgttcgccga tccggtcttt accgcctcgg acgcgcgcgt gcagctgacc
      481 gcgtcccgtg tcgcgtccgc ggcgccggcg gcctcggacg cgcaaacgcg cctgctgaca
      541 caaacggacg acaccgccac gcccggcttc ggcaacatcg cgcgcttgcg cttcaccgac
      601 gacgaggcga aggcgatcct cgcggcggcg cagggacgac agaatctgtc ggccatcggg
      661 ttcgacgcca ccaaagctgc cgccgtggac cagggcctgg gcgcgtatcg ctatctccat
      721 ttcgccacgc acggcttcct cgacaccgcg cgcccgtcgc tctcggccat cgcgctgtcg
      781 ctcgtcggtc cagacggcac gccgcaggag ggcttcttgc gcgcccacga gctgtacaac
      841 ctgaatctct cagccgatct cgtggtgctg agcgcctgcg agaccgggct cggcaaggag
      901 attcgcggcg aggggttgat cggcctcacg cgcgcgttca tgtatgcggg cgcggcgcgc
      961 gtgatcgtca gcctgtggag cgtctgcgat cgcgcgacgt cgtcgttgat gagccggctc
     1021 taccgcgaga tgcttcgcaa cggacggaca ccggcggcgt cgctgcgcgc ggcgcagctc
     1081 gcgctgcgat cggacgcgcg atggcgtcac ccgtactact gggccgcgtt caccatccag
     1141 ggcgatctgt gacgaaatgt agacttctga atccagaatt ctgaattcca tccaattctt
     1201 cgtcccagac ttcattcgtc acacgcgtta aacaccgctc gatcaccact cgtcccttcg
     1261 cccggcagac ccgtcactcg tcccaacggc aggctttttt cttcttgctg tccgtttaga
     1321 tgtggtcgtg tgtccggcgc gcgtgccggg aggagtggac gatggcaaga cggatctccc
     1381 tgattgtcgc ggcgctgatc tgcctgagct cgggcgtggc aggcgcgcaa gagcgattcg
     1441 gcggactggc tggcaccgtg acggacgaaa cgaaaggtgc ccttcccggc accacggtga
     1501 cggcgaccaa tgtcgagacc ggcgcccagc gcgtggtggt cagtagcgcc gacggcagct
     1561 accgcgtgcc cgatctcgaa ccgggccgct actcggtggc cttcgagctc gacaccttcc
     1621 agaaggtggt gatgaacgac gtgctcgtcc tcctgggccg gacggtgggc gtggacgccc
     1681 agatgaaggt cggcggcatc caggaagcgt tgacggtcac ggccgactcg gccaagcagt
     1741 tggacctcac gaaggtgacg ctcgcgcaca acatcacggc cgaagagttc gaccgcctgc
     1801 caaaggcgcg cagcttccaa ggtctggcgc tgacggctcc cggcgtcaac gccggtgaga
     1861 tcgaaggcgg cctccaggtg aacggcgcca gcgcggcgga gaaccagttc acggtggacg
     1921 gcgtggcgat caacagcctc atttacggca actcgcgcca gaacacggta ttcgaatacc
     1981 tgcaggaagt gcaggtgaag accggcggca tcgacgccga atacggcggc gcgctcggcg
     2041 gcgtcgtaag cgcggtcacc aagtccggcg gcaacacctt cagcggcgaa acgcactact
     2101 actacatcgg cagcgcgctc agcgccggcc ccttcaagcg tctccagctc gacccgaaca
     2161 cactcgcgac ggcggcctac taccaggacg agaagcagtc gaacaaccag agcgaattcg
     2221 gcggctcgct cggcggcccg atcgtcaagg acaagctgtt cttcttcggg tccgtgtcgc
     2281 cgcgggtcgt ccgccgcacc aacgaatatc tgttttcggc gggcaccgaa ccgggcgaga
     2341 tcagccagaa gcagaccgcc tggcagggct tcggcaaggt cacctacgcg gccaacaagg
     2401 tgcacgccaa cgccagcctg ctcatgacgc ccacgcgctc cgagggacgt ctgccggcct
     2461 atgacggcac cggaaccaac tggctcacga cgtcggccgc cgccaatcag gcggaaacga
     2521 cgcgcggctt cgaaggcgat cagaacaact tcagctcgaa cgtggacatc tggctgcgca
     2581 acaacagcta cctgagcgcg cgcgccggct acttctacga cgcctacaag gaca
//
LOCUS       DASSYW010000459         2548 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1682344, whole genome shotgun sequence.
ACCESSION   DASSYW010000459 DASSYW010000000
VERSION     DASSYW010000459.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2548)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2548)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2548
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1682344"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..444
                     /locus_tag="VFN38_07360"
     CDS             <1..444
                     /locus_tag="VFN38_07360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011618.1"
                     /translation="RLLKRGIVPLVGGGRSRLSVVHGANVADGMVRAAATDAAGGRAY
                     NLSNDFDVTVEQFFRLGCAGLGVRMRTVPVPIAVARGGIGLFHLVAPLLFGSRFSMVS
                     SASLDFISRDNPFTSERARRELGWDPPVRPEEGVPEAFRWWATHN"
     gene            complement(523..723)
                     /locus_tag="VFN38_07365"
     CDS             complement(523..723)
                     /locus_tag="VFN38_07365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011619.1"
                     /translation="MKRLALVAAVLVIAACSTKETPKADTAAPAMAPAPAMTDTGMKM
                     DSAAAKIDTSAKKADSAAKKTP"
     gene            1060..>2548
                     /locus_tag="VFN38_07370"
     CDS             1060..>2548
                     /locus_tag="VFN38_07370"
                     /inference="COORDINATES: protein motif:HMM:NF012602.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HET9011620.1"
                     /translation="MTTAAPSPNFEIARDGVVRGACPHDCPDTCATLVTVQEGRAVRI
                     AGDPAHPVTQGFLCAKVNRYVERTYHAERLTTPLRRVGAKGEGRFEPITWDAALDEIA
                     ARLGDIARSADGPQAILPYSYAGTMGMVQGESMDRRFFHLLGASKLDRTICSMAGTVG
                     MRMTVGANVGADSEGVPESDLVLLWGTNTLTANPHLWPFVMQAKARGAPIVCIDPIRT
                     RTAAQCDEWLAIRPGTDGALALGMMHVLFAAALEDRDFLERYTLGHEQLRARAADWTP
                     ARTAAVTGLSEREIVSLGERYGRAKAAFIRVNYGLQRHAGGGMAVRNIACLPAITGHW
                     RRPGGGVQLSTSANFQFDRAAIARPDLGPPVRTINMIRLGDALTRRDAGVGGPPVRAL
                     VVYNSNPAAVAPERTTVLRGLAREDLFTVVLEHFQTDTADYADVLLPATTQLEHEDLH
                     KAYGHHYASLNRPSIAPLGEALPNTEIFRRIACRMGMRDGHFRDDD"
BASE COUNT          364 a          924 c          869 g          391 t
ORIGIN      
        1 cgcctgctga agcgcggcat cgtgcccctc gtgggcggcg ggcggtcgag gctctcggtg
       61 gtccacggcg ccaacgtggc cgacggcatg gtgcgcgcgg cggccaccga tgcggcgggg
      121 ggacgcgcct acaatctctc caacgacttc gacgtcacgg tggagcagtt cttccggctc
      181 ggctgcgcgg ggctgggcgt ccgcatgcgg acggtgcccg tcccgatcgc ggtggcgcgc
      241 ggggggatcg gtctcttcca cctcgtcgcg cccctgctgt tcggcagccg cttcagcatg
      301 gtgagctcgg cctccctcga cttcatctcg cgcgacaacc cgttcacctc cgagcgcgcg
      361 cggcgcgagc tcggctggga tccaccggtg cgtcccgagg agggggtgcc ggaggccttc
      421 cgctggtggg ccacccacaa ctagtcgcgc gagccgccga cgcgaaaacg gggcgccgca
      481 ctcgaaagtg cgacgccccg tccgactccc gtgatccgaa gattacgggg tcttcttcgc
      541 ggcggaatcc gccttcttcg cggacgtgtc gatcttggcg gcggcggaat ccatcttcat
      601 gccggtgtcc gtcatggccg gggccggagc catggccggg gcggcggtgt cagccttcgg
      661 ggtctccttc gtgctgcagg cggcgatgac gagcacggcg gcgacaaggg ccaggcgctt
      721 catgtaattc tcctgagtag gtcttggtgt gtatgacgcg tttggtccgt gcacgcgact
      781 gcggtgccgg ccttcagcgt ggggaaactt agatttcccg gaagcgctgt caagagcgga
      841 tcgatcacgc caagtgacga tggcccaaca gttttactcg gcgtgcaacg ggatcggggc
      901 accaccggtt tgccgtcggg tccgtcccga ggaccgccat atgtttgcac gcgcccggta
      961 acccgcgacc tggtaacgag ttaccacgat cctccagaat cgtcagtggc ctcgcggatt
     1021 ccgcggcagt agcttgcgac tcattccgcc ttcctcccga tgaccaccgc cgccccctcg
     1081 ccgaatttcg agattgcgcg cgacggcgtc gtgcgcggtg cctgcccgca cgattgcccg
     1141 gacacctgcg ccacgctcgt cacggtgcag gagggtcgtg ccgtccggat cgccggcgac
     1201 cccgcccatc ccgtgacgca gggcttcctc tgcgccaagg tgaaccgcta cgtcgagcgg
     1261 acctatcacg ccgagcggct caccacgccg ctgcgccgcg tgggcgccaa gggggagggc
     1321 cgctttgagc ccatcacctg ggacgccgcg ctcgacgaaa tcgcggcgcg cctcggtgac
     1381 atcgcgcgct cggccgacgg cccgcaggcg atcctgccct actcctacgc cggcacgatg
     1441 ggcatggtgc agggcgagtc catggaccgc cgcttcttcc acctgctcgg cgcatcgaaa
     1501 ctggaccgca cgatctgctc gatggccggc accgtcggca tgcgcatgac ggtgggcgcc
     1561 aacgtgggcg ccgacagcga gggggtgccg gagagcgatc tcgtgctcct gtgggggacg
     1621 aacaccctca ccgcgaatcc gcacctctgg cccttcgtga tgcaggcgaa ggcgcgcggc
     1681 gcgccgatcg tctgcatcga cccgatccgc acccgcacgg ccgcgcagtg cgacgaatgg
     1741 ctcgcgatcc gcccgggcac ggacggcgcg ctggcgctcg gcatgatgca cgtgctgttc
     1801 gccgccgcgc tggaagatcg cgacttcctc gagcgctaca cgctcggcca cgagcaactc
     1861 cgcgcgcgcg ccgccgactg gacgccggca cgcaccgccg cggtcaccgg gctgtccgaa
     1921 cgggagatcg tctcgctcgg cgagcggtac ggtcgcgcca aggcggcgtt catccgcgtg
     1981 aactacgggc tgcagcgaca cgccggcggc gggatggcgg tgcgcaacat cgcctgcctg
     2041 cccgcgatca ccggccactg gcgccggccc gggggcggtg tccagctctc gacctcggcc
     2101 aacttccagt tcgaccgcgc cgcgatcgcg cgtccggacc tcgggccgcc ggtgcgcacg
     2161 atcaacatga tccggctggg tgacgcgctc acgcgccgcg acgccggcgt gggcggcccg
     2221 ccggtgcgag cgctcgtcgt gtacaacagc aacccggcgg cggtcgcgcc ggagcgcacc
     2281 accgtgctgc gcggcctcgc gcgcgaggac ctgttcaccg tcgtgctcga gcacttccag
     2341 accgacaccg ccgactacgc ggacgtgctg cttcccgcga cgacgcaact cgagcacgaa
     2401 gacctgcaca aggcctacgg ccaccactac gcgtcgctga accggccgtc catcgcgccg
     2461 ctcggcgaag cgctccccaa caccgagatc ttccgccgca tcgcgtgccg gatggggatg
     2521 cgcgacgggc acttccgcga cgacgacc
//
LOCUS       DASSYW010000460         2594 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_179701, whole genome shotgun sequence.
ACCESSION   DASSYW010000460 DASSYW010000000
VERSION     DASSYW010000460.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2594)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2594)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2594
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_179701"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            149..646
                     /locus_tag="VFN38_07375"
     CDS             149..646
                     /locus_tag="VFN38_07375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011621.1"
                     /translation="MPLVPFETLPDSARVWVFGSDRPLSDEATEILMKAVEDHIAEWK
                     AHGEPLTAAYEWRFGRLLVVGVDQRTAGASGCSIDGLFRVLQGLEPQLGARLVGGGRV
                     FYRDSNGEVQSVERHELKSLRESGAIRENSVVFDTSLTDLGSLREGFERPARKSWAAG
                     MLALN"
     gene            complement(849..1478)
                     /locus_tag="VFN38_07380"
     CDS             complement(849..1478)
                     /locus_tag="VFN38_07380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011622.1"
                     /translation="MAEVLPLFGFYLQPAVGGRVLGYRFWREFADIERAWAIKIAPFD
                     RYRTIDVVRAVVDSGRTDLALYTGNDDAIVPDLVTPFPAGDGAPRRIVGGLLGQWAVW
                     THAAVMLLERVRRTRAASSVDASLLREGAALTDANAAIFDAANGFAGCIPGIHEVLRR
                     QGLLRGRWCLDPHEELSRGQAEEIERVLARHPELTDDEFVSERLEGWLS"
     gene            complement(1496..1795)
                     /locus_tag="VFN38_07385"
     CDS             complement(1496..1795)
                     /locus_tag="VFN38_07385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011623.1"
                     /translation="MAASDRARALRASLGAGVVIPAHPLALTADRRLDERHQRALTRY
                     YIDAGAGGLAVGVHTTQFAIRLPEHGLYRPVLALAAETARSWMSSARWARRATRS"
     gene            complement(1782..>2594)
                     /locus_tag="VFN38_07390"
     CDS             complement(1782..>2594)
                     /locus_tag="VFN38_07390"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HET9011624.1"
                     /translation="AAASLEAHGVETVSADLLAPRELAALPDAPNVIFMAGQKFGTTG
                     NPATTWAMNAAVPAFVAERYAGARTVVFSTGNVYPLTPPGRGGSRETDPPAPVGEYAF
                     SCLARERLFTAAAARHRSPVAIVRLNYAHDLRYGVLTDLALRVARGEPIDLAMGFVNV
                     IWQGDANAFALAALTATATPEPFIVNVAGPEVHRVADLARALGSRLDVEPVLVGTEGT
                     DALLSDASRMRALLDHTLLPVETLLEWVASWVRRGGPLLGKPTSFERRDGRF"
BASE COUNT          407 a          903 c          917 g          367 t
ORIGIN      
        1 ggcgaaagcg atcgtcgaga ggctcggcat cgatggtgcg ttgtactctg gaagcgggac
       61 gacgggcgcg agtatcttaa gcggtgacaa tcgcgcgcgc cgagtacgtc gcgcgccgtc
      121 ccatccgccg accacggagc ctcgtcccat gccgctcgtt cccttcgaga ccctgcccga
      181 ttccgcccgc gtgtgggtgt tcggcagcga ccggccactc tccgacgagg cgaccgagat
      241 cctgatgaag gcggtcgagg accacatcgc cgaatggaag gcgcacggcg agccgctgac
      301 cgcagcgtac gaatggcggt tcggacgact gctggtggtc ggggtggacc agcgcaccgc
      361 tggtgcttcg ggctgctcga tcgacgggct gttccgcgtg ctccaaggcc tcgagccaca
      421 gctgggcgcg cgcctcgtgg gcggcggccg ggtgttctat cgcgacagca acggcgaggt
      481 ccagtcggtc gagcgccacg agctcaagtc cctgcgcgag tccggcgcga tccgggagaa
      541 cagcgtcgtg ttcgacacga gcctcaccga cctgggctcg ctgcgcgaag gattcgagcg
      601 gccggcgagg aagagctggg cggctggcat gctggctctg aactgagtag gcactgcagt
      661 actcggtact ctgtaccacc gaggtaccca gacccgcgcg acgagcctca cgaattcatc
      721 gctgagcgct cgaccgggac gctccgattc gggcgtttcg ctgcagagac ctgaccgggc
      781 attcgtggga ccggtatgcc agtctgcgta cgtcggttgt acggagtaca cagtacagcg
      841 gtgctctctc acgagagcca cccctccaac cgctccgaga caaactcgtc atccgtcagc
      901 tccggatgcc gtgcgagcac tcgctcgatc tcttccgcct gtccgcgtga cagctcttcg
      961 tgtggatcca ggcaccacct gccgcgcagc agtccctggc ggcgcagcac ctcgtggatt
     1021 ccggggatgc agccggcgaa cccgttcgcg gcgtcgaaga tcgccgcgtt cgcgtcggtg
     1081 agcgcggcgc cctcgcgcag gagcgacgca tcgacgctgc tcgccgcgcg cgtccgtcgc
     1141 acccgctcga gcagcattac ggcggcgtgc gtccacactg cccactggcc gagcagcccg
     1201 cccacgatgc ggcgaggcgc accgtcgccg gcggggaagg gcgtcacgag atccggcacg
     1261 atcgcgtcgt cgttgccggt gtagagcgcg aggtctgttc ggccggagtc gaccaccgcg
     1321 cgtacgacgt cgatggtccg atagcgatcg aacggtgcga tcttgatcgc ccacgcccgc
     1381 tcgatgtcgg cgaactcgcg ccagaagcga tatccgagca cgcggcctcc gaccgccggc
     1441 tgcagataga agccgaacag gggcagcacc tcggccacgg cgcggcagtg cgcgatcagc
     1501 tccgcgtcgc tcgcctcgcc cagcgcgccg aggacatcca gctccgcgcc gtctccgccg
     1561 cgagcgcgag caccggacga tagaggccgt gctccggcag ccggatcgcg aactgcgtgg
     1621 tgtgcacgcc gacggcgagc ccgcccgcgc cggcgtcgat gtagtagcga gtgagcgcac
     1681 gctgatgacg ctcgtcgagc cgacgatccg ccgtgagggc gagcggatgc gccgggatca
     1741 ccacgccagc gccgagcgac gcgcgcaacg cgcgcgcgcg atcagaagcg gccatcacgt
     1801 cgttcgaagc tcgtcggctt gccgagcagc ggcccgcctc tgcgcaccca cgacgccacc
     1861 cactcgagca gcgtctcgac cgggagcagt gtgtggtcga ggagtgcacg catgcgcgat
     1921 gcgtcgctca gcaacgcgtc cgtcccctcg gtgccgacga gcacgggctc gacgtccaga
     1981 cgcgagccga gcgcgcgcgc gaggtcggcg acccggtgga cctcgggccc ggcgacgttg
     2041 acgatgaacg gctcgggcgt ggccgtcgcc gtcagtgcgg cgagcgcgaa ggcgttcgcg
     2101 tcgccctgcc agatgacgtt gacgaacccc atcgcgagat cgatcggctc gccgcgcgcg
     2161 acgcgtagcg cgagatcggt gagcacaccg tagcgcagat cgtgcgcgta gttgagccgc
     2221 acgatggcga ccggcgagcg atggcgggcc gccgccgcgg tgaagagccg ctcgcgggcg
     2281 agacaggaga aggcgtattc ccccaccggc gcgggcggat ccgtctcgcg cgagccgccg
     2341 cgcccgggcg gcgtgagcgg atacacgttt ccggtcgaga acacgacggt acgcgcgccc
     2401 gcgtagcgtt cggcgacgaa cgccggcacg gcggcgttca tcgcccacgt ggtggccgga
     2461 ttcccggtgg tgccgaactt ctgccccgcc atgaagatca cgttgggcgc gtccggcagc
     2521 gcggcgagct cccgcggcgc gaggaggtcc gcactgaccg tctcgacgcc gtgcgcctcg
     2581 agcgacgcgg cggc
//
LOCUS       DASSYW010000461         2246 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_554236, whole genome shotgun sequence.
ACCESSION   DASSYW010000461 DASSYW010000000
VERSION     DASSYW010000461.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2246)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2246)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2246
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_554236"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            329..1432
                     /locus_tag="VFN38_07395"
     CDS             329..1432
                     /locus_tag="VFN38_07395"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HET9011625.1"
                     /translation="MLTGVKILDLSRVLAGPLCTMMLGDLGASVLKVERPEGGDETRG
                     WGPPFDARGESAYFLSVNRNKLGLGLDLDVAADVALLRALAAEADVVVENFRAGTLER
                     RGVGHEALREANPSLVWCTISGFGAGSSRPGYDFVVQAESGWMSITGEPDGAPMKHGI
                     ALADVLAGKDAAVAILAALVARARTGRGRLVQVSLAATAEAALVNVAQNALVSGAPAA
                     RWGNAHANLVPYQLFDAEDRALVIAVGSDAQWTACARALELETLGAEPALRTNAGRLA
                     ARARVVGAIAERVRSRPASVWLERLGREGVPSGIVRSVLEVLADRDGSALTGMPPSVP
                     GAIRRPPPRLGEHSALVRARGWQAFADDGESPR"
     gene            1494..2135
                     /locus_tag="VFN38_07400"
     CDS             1494..2135
                     /locus_tag="VFN38_07400"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HET9011626.1"
                     /translation="MATRIERSGGVGTLSCARTSRYSIVVRTTEPEQLVDQDDSDQRI
                     IQRVLAGNRDDFTMLITRYSDPLYRHALCMTGSPDVAEDILQLSFIKAYQHLAEVRGR
                     FDAWVFRIVANGCKDWLKNIRRSHLSYDEDDQPSGFATPEEELDRTELRSDLDMALSS
                     LPASLREAFVMKHVEGRSYEEMADLLGTTVGALKMRVHRAREALQALLEEKYA"
BASE COUNT          346 a          707 c          806 g          387 t
ORIGIN      
        1 gtccgcgacg tggggctggc gcggccggag cggccggcat ttcctcggtc gtctcgtcct
       61 tgtccaccat gtcccggtcc gttcccgtgc tccaggggag ggactccccg tttcatttga
      121 aggccgcgcg tcgacgcgct aacttggcca cccgcgctgc aaggcccggt ttgtggcggc
      181 aagtatatga tttttcgaca gctacgcaag gttcgctgac acactgcgcg agcgtttttt
      241 cgccgtcgga ccggccgttt ttcccagtgc gcgcaggttt ccagccgctc agatgcataa
      301 catcatcgcg acaccatagg gatatacaat gctcacaggt gtcaagattc tcgatctgag
      361 ccgagttctg gccggaccgc tgtgcacgat gatgctcggc gatctggggg catcggtcct
      421 gaaggtcgag cggccggaag gcggggacga gacccgcggc tggggtcctc ccttcgacgc
      481 gcggggagag agcgcctact tcctgagcgt caatcggaac aagctgggcc tcggcctgga
      541 cctcgatgtc gcggccgacg tcgccctcct tcgcgcgctg gccgccgagg cggacgtggt
      601 ggtggagaac ttccgcgcgg gaacgctgga gcgacgcggc gtgggtcacg aggcgctgcg
      661 ggaggcgaac ccgtccctgg tctggtgcac catcagcgga ttcggcgcgg gctcgagccg
      721 tcccggctat gacttcgtgg tgcaggcgga gagcggatgg atgtcgatca ccggcgagcc
      781 ggacggtgcc ccgatgaagc acgggatcgc gctcgccgac gtgctcgccg gcaaggatgc
      841 cgcggtggcg attctggcgg cgctcgtggc gcgagcgcgg acggggcgcg gccgtctggt
      901 gcaggtctcg ctcgccgcga ccgccgaggc ggcgctggtg aacgtcgcgc agaacgcgct
      961 ggtctcgggt gcgccggccg cacgatgggg caacgcgcat gcgaacctcg tcccctatca
     1021 gctgttcgac gcggaggatc gcgcgctggt gatcgcggtg gggagcgatg cgcagtggac
     1081 ggcgtgcgca cgcgcgctcg agctggagac gctcggcgcg gagcccgcgc tgcgcacgaa
     1141 cgccggccgg ctcgcggcgc gcgcgcgcgt ggtgggagcg atcgccgagc gcgtgcggtc
     1201 gcggccggcg tcggtgtggc tcgagcggct cggacgcgaa ggcgtgccga gcgggatcgt
     1261 gcggtccgtg ctcgaggtgc tggcggaccg ggacgggtcg gcgctcacgg gcatgccgcc
     1321 cagcgttccg ggcgcgatcc ggcgcccgcc gccgcgcctt ggcgagcatt ccgcgctggt
     1381 gcgcgcacgg gggtggcagg cctttgctga cgacggagaa tcaccgcggt gacgagcgat
     1441 tttcaggggg aaatcggctg ttactgcggc cctcgccgac tcgtcttttg cacgtggcga
     1501 cccggattga gcgatctggc ggggtgggta ccctgtcctg cgcgcgaact tcgcgttact
     1561 cgatcgtcgt gaggacgacg gagccagaac agctcgttga tcaggacgac tctgatcaac
     1621 gcatcattca gcgcgtgctc gcgggcaacc gcgacgactt taccatgctg atcactcggt
     1681 acagtgatcc gctgtatcgc cacgcgctct gcatgacggg aagcccggat gtcgcggaag
     1741 acatcctgca gctgtccttc atcaaggcgt accaacacct tgctgaggta cgaggccgtt
     1801 tcgacgcctg ggtgttcagg atcgtcgcca acggctgcaa ggactggctg aagaatatcc
     1861 gtcgctccca tctcagctac gacgaggacg atcagccctc gggcttcgcg acgccggaag
     1921 aagagctgga ccggaccgag ctgcgcagcg acctggacat ggcgctttca tcactgccgg
     1981 cttcgctgcg cgaagccttc gtgatgaagc acgtggaagg gcgctcgtac gaggagatgg
     2041 cagacctgct gggaactacg gtcggtgcgc tcaagatgcg cgtccatcgc gcgcgcgaag
     2101 cgctccaggc cttactggag gagaaatacg cctaatgttc catgacctgc attccgatgg
     2161 cctgggtgac ggccacaagc gggagcgctc ggaacagtcg gagcgtccac tcgccgatcg
     2221 cgaagtcccg cttggtccgc cacgct
//
LOCUS       DASSYW010000462         2169 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1825863, whole genome shotgun sequence.
ACCESSION   DASSYW010000462 DASSYW010000000
VERSION     DASSYW010000462.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2169)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2169)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2169
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1825863"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1312)
                     /locus_tag="VFN38_07405"
     CDS             complement(<1..1312)
                     /locus_tag="VFN38_07405"
                     /inference="COORDINATES: protein motif:HMM:NF039587.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5916 domain-containing protein"
                     /protein_id="HET9011627.1"
                     /translation="MSVPAAEAAERSSTHAATRAAAPAIRLDGDLSDPAWRDAGVISE
                     FIQREPAEGAPPTYRTEARVVFDDAALYIGVRAFDGDPDRILAFLTRRDSDSASDWIR
                     VLIDSSHDRRTAYEFMVNPAGVKRDMYYFNDNNNDESWDAVWDVAVQRTPDGWSAEFR
                     IPYSQLRFSSGEDATLGFAISREVGRLRETSTWPLLPRGASGYVSSFGELSGVVRPAG
                     GKRLEVAPYVLGQVRTVPEQPGNPLLNTPDPGGTIGLDMKYRVSRALAFTGTVNPDFG
                     QVEADPAEVNLSAFETFFNERRPFFVEGSGAYQFDCDDCSIFYSRRIGRTPRGAPDAT
                     GGYEVHPGQSTILGAGKLTGRVGDFSVGTLAAVTQEEHAQLAIGDARFTQPVEPQTFY
                     SVTRVRREFADQSSLGLILTSANRGHTDVLDFLADSAVTGGLDYD"
     gene            complement(1384..2076)
                     /locus_tag="VFN38_07410"
     CDS             complement(1384..2076)
                     /locus_tag="VFN38_07410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011628.1"
                     /translation="MITVLAFFVCACTMDSRAAHAQPLPNGRTDVMAAVGDSFKLLLI
                     EHGIRISFQEKTRKELGGPFWSDYQRSVKVPQQWDDTDAWYVNYVGHPIHGAAAGYNW
                     LDHGPDGAVPFGRSSRYWSAKGRATAWAAAYSLQFEVGPLSEASIGNVGMRSETTGWV
                     DHVVTPLGALGLMVAEDAVDRYVTEWIEGRVRNRIVRASVRVALNPARALSNGAAGRA
                     PWHRTGRPLLWR"
BASE COUNT          354 a          749 c          746 g          320 t
ORIGIN      
        1 agtcgtagtc caggccgccg gtcaccgcgc tgtccgccag aaaatcgagc acgtcggtgt
       61 ggccgcgatt cgcgctcgtg aggatcaggc cgagcgacga ttgatccgcg aactcgcgcc
      121 ggacgcgcgt gaccgagtag aacgtctgcg gctccaccgg ctgggtgaag cgggcgtcgc
      181 cgatcgcgag ctgcgcgtgc tcttcctgcg tcacggcagc cagcgtgccc actgaaaaat
      241 cgccgacgcg gccggtgagc ttgccggcgc cgaggatggt ggactgcccc ggatgcacct
      301 cgtagccgcc cgtcgcgtcc ggagcgccgc gcggcgtgcg cccgatgcgg cgggaataga
      361 agatcgaaca gtcgtcgcag tcgaactgat aggcgcccga cccctcgacg aagaacggcc
      421 ggcgctcgtt gaagaacgtc tcgaacgccg acaggttcac ttcggcgggg tcggcttcca
      481 cctgcccgaa gtccgggttg acggtgccgg tgaacgcgag cgctctcgac acccggtatt
      541 tcatgtcgag tccgatcgtc cctcccgggt ctggtgtgtt caggagcggg ttgcccggct
      601 gctctggcac cgtgcgaacc tggccgagga cgtacggcgc cacctcgagt cgtttgccgc
      661 ccgccgggcg cacgacgccc gacagctcgc cgaacgacga gacgtagccg ctggcgccgc
      721 gcggcagcag cggccaggtg gacgtctcgc gcaggcggcc cacctcgcgg gaaatggcaa
      781 aacccagcgt cgcgtcctcg ccgctgctga atcgcagctg tgagtacgga atgcggaact
      841 cggccgacca gccgtcgggc gtgcgctgca ccgccacgtc ccacacggcg tcccagctct
      901 cgtcgttgtt gttgtcgttg aagtagtaca tgtcccgctt cacgccggcg gggttcacca
      961 tgaactcgta cgcggtgcgc cgatcgtgag acgaatcgat gaggacgcga atccagtcgg
     1021 acgccgaatc gctgtcacgc cgcgtcagga acgccaggat gcgatcggga tcgccgtcga
     1081 acgcgcggac gccgatgtag agggccgcgt cgtcgaacac gacgcgcgcc tcggtgcggt
     1141 aggtaggagg cgcaccctcg gccggctcgc gctgaatgaa ctcggaaatc acgccggcgt
     1201 cgcgccacgc cgggtccgac aggtcgccgt cgagacggat ggccggtgcg gcggcgcgcg
     1261 tcgcggcatg ggtggagctg cgctcggccg cttcggcggc gggcaccgac acggctccgg
     1321 ccaggccaca ggccagcaga gcacccgcca cccaccgagg cgcccgcact gggcgattag
     1381 acgctaccgc cagagcagcg gccggccggt ccgatgccat ggcgcgcggc cggcggcacc
     1441 gttcgagagc gcccgcgccg ggttgagggc gacgcgcacc gaggcgcgga cgatccgatt
     1501 gcgcacgcgg ccctcgatcc actccgtgac atagcggtcc acggcgtcct ccgccaccat
     1561 caacccgagc gcgccgagcg gtgtgacgac gtggtccacc catcccgtgg tctctgaacg
     1621 cattccgacg ttgccgatcg aggcttcgct gagcggtccg acctcgaact gcaggctgta
     1681 ggcggccgcc caagccgtgg cccgcccctt ggcggaccag tatcgcgacg agcgcccgaa
     1741 tggcacggcc ccgtcgggac cgtgatcgag ccagttgtaa cctgccgccg cgccgtgaat
     1801 cggatgaccg acgtagttca cgtaccaggc gtcggtgtcg tcccactgtt gcggcacctt
     1861 gaccgagcgc tggtagtcgc tccagaacgg tccgccgagc tccttacgcg tcttctcttg
     1921 aaaggaaatg cggatcccgt gctcgatgag gagcagcttg aacgaatcgc cgaccgcagc
     1981 catgacgtcg gtgcggccgt tgggaagcgg ctgggcgtgc gcggcacgag aatccatcgt
     2041 gcacgcgcac acgaagaacg cgagaactgt aatcactgcc cgcgtcggac gacgcgggac
     2101 gcacccgggg gagactgtgt ccgtcgtcta ccaacgcggc tcagagcgtc gactcggtcc
     2161 gcgccctcc
//
LOCUS       DASSYW010000463         2338 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1477989, whole genome shotgun sequence.
ACCESSION   DASSYW010000463 DASSYW010000000
VERSION     DASSYW010000463.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2338)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2338)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2338
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1477989"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1262
                     /locus_tag="VFN38_07415"
     CDS             <1..1262
                     /locus_tag="VFN38_07415"
                     /inference="COORDINATES: protein motif:HMM:NF020892.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HET9011629.1"
                     /translation="TTDQLHRDGVKALIERIFERNPGDFYEKAYEGLYCVGCEAFKQD
                     AEIVDGKCALHPTRTLERVQERNWFFRLSRYQDFLRRLLTERPDFLQPESRRNEMLAL
                     LERGLDDVSASRSRLQWGIPFPRPLSSGEVQTTYVWFDALPNYLTATGFPQGGWSSRW
                     PAQLHVVGKDIIRFHSIIWPAMLEAAQLPLPERVWGHGFVLLGGERFSKSAGVRLDLD
                     EAIDKYGADAFRYFLLREIPFDADGSFSWERFEDRYNSDLANAWGNLASRVISMVERY
                     CDGIVPAGARTDVDTRDAAELVEYHQAMDGTRGFLLHEALRLIWQSVVRGNEYVDRQA
                     PWKLAKDPATRSELETTLASLVRQLARQAVLVAPFMPEKAQELWTQLGATRPLANQRF
                     HMLPTLDATGWQVRKGEPLFPKEKPAA"
     gene            complement(1294..1950)
                     /locus_tag="VFN38_07420"
     CDS             complement(1294..1950)
                     /locus_tag="VFN38_07420"
                     /inference="COORDINATES: protein motif:HMM:NF015944.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LemA family protein"
                     /protein_id="HET9011630.1"
                     /translation="MTRRWLALVLPLALSACGYNRIQSLDEQANAAQGQIEVQLQRRA
                     ELIPNLVATVKGLANQELAVFGEVARARGGLLNAVQSKDPEQMAQANAQVNGALGRLL
                     AVAEAYPQLKSDQGFLKLQDELAGTANRIATSQTDYNGAVQQYNAYIRQFPAVLTAKM
                     TGAKEKKYFQVTNPQNRESPTVDFGTPGSPATSAPAAGPSAPAPAPVTPPAGAAPAKP
                     "
     gene            complement(2100..>2338)
                     /locus_tag="VFN38_07425"
     CDS             complement(2100..>2338)
                     /locus_tag="VFN38_07425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011631.1"
                     /translation="VLFRAVLRLHGESPPAENVATATRVGALAGFDPAPFLRAVRHVR
                     GEARLAGPESGQVLGGYIAAIERLRSHLDQFTAP"
BASE COUNT          362 a          810 c          805 g          361 t
ORIGIN      
        1 gcaccaccga ccagctccat cgcgacggcg tgaaggcgct gatcgagcgc atcttcgagc
       61 ggaatcccgg cgacttctac gagaaggcgt acgaggggct gtactgcgtc ggctgcgagg
      121 cgttcaagca ggacgccgag atcgtggacg gcaagtgcgc gctgcatccg acgcgcacgc
      181 tcgagcgcgt gcaggagcgc aactggttct tccggctcag ccgctaccag gacttcctgc
      241 ggcgcctgct cacggagcgg ccggacttcc tccagcccga gagccggcgc aacgagatgc
      301 tcgcgctcct cgagcgcggg ctcgacgacg tgtcggccag ccggtcgcgc ctgcaatggg
      361 ggatcccctt ccccaggccc ctcagctccg gcgaggtgca gacgacctac gtctggttcg
      421 acgcgctccc gaactacctc accgccaccg gctttccgca gggcggctgg agctcgcgct
      481 ggcccgcgca gctgcacgtg gtgggcaagg acatcatccg cttccactcc atcatctggc
      541 ccgcgatgct ggaggcggcg cagctcccgc ttcccgagcg cgtgtggggc cacggcttcg
      601 tgctcctcgg tggcgagcgg ttcagcaagt cggccggtgt gcggctcgac ctcgacgagg
      661 cgatcgacaa gtacggcgcc gacgccttcc gctatttcct gctgcgcgag atccccttcg
      721 acgccgacgg cagcttctcg tgggagcggt tcgaggatcg gtacaacagc gacctcgcga
      781 acgcgtgggg gaatctcgcg agccgcgtca tctcgatggt cgagcgatac tgcgacggaa
      841 tcgtgcccgc cggcgcacgc accgacgtcg acacgcgcga cgcggccgag ctcgtggagt
      901 accatcaggc gatggacggg acgcgcggat tcctgctgca cgaggcgctg cggctcatct
      961 ggcagagcgt ggtgcgcggc aacgagtacg tcgaccggca ggcaccgtgg aagctcgcca
     1021 aggatccggc aacacgatca gagctcgaga cgacgctcgc ctcgctcgtg cgtcagctcg
     1081 cgcgacaggc ggtgctcgtc gcgccgttca tgcccgagaa ggcgcaggag ctgtggacgc
     1141 agctcggcgc cacgcgtccc ctcgccaacc aacgcttcca catgctcccg acgctcgacg
     1201 ccaccggatg gcaggtgcgg aagggcgagc cgctctttcc aaaggaaaag ccggccgcgt
     1261 gagcggccgg ctcgtgtttc ctccgggcga acgtcagggc ttcgcgggcg ccgcaccagc
     1321 cggcggcgtg accggcgccg gcgccggcgc ggacggtccg gccgcgggcg cgctcgttgc
     1381 cggcgatccc ggcgtcccga agtccaccgt cggcgactcg cggttctgcg ggttcgtgac
     1441 ctggaaatac tttttctcct tcgctcccgt catcttcgcc gtgagcacgg cggggaactg
     1501 acggatgtag gcgttgtact gctgcaccgc cccgttgtag tccgtctgcg aggtcgcgat
     1561 gcggttggcg gttcccgcca gctcgtcctg tagtttcagg aatccctgat cgctcttgag
     1621 ctgcggatac gcctccgcca ccgcgagcag ccggccgagc gcgccgttga cctgcgcgtt
     1681 cgcctgcgcc atctgctccg ggtccttgga ctgcacggcg ttgagcagac cgccgcgcgc
     1741 gcgcgcgacc tcgccgaaca cggccaactc ctggttggcc aaccccttca ccgtcgccac
     1801 gagattgggg atcagctcgg cgcgccgctg cagctggacc tcgatctgtc cctgagcggc
     1861 gttcgcctgc tcgtcgagcg actggatcct gttgtacccg cacgcgctaa gcgcgagggg
     1921 gagcacgagt gcaagccagc gacgtgtcat gagagccgtt cctgagaggg ctgatgaaat
     1981 cgcgacgtgc ctcggcccgc aatcgggccg catggcacgg aacgcatccc ggacgcccag
     2041 tgcgtccgga gtggagcggg cggcgacgac gccgccacgg agagcacgca aggagcgcat
     2101 catggagcgg tgaactgatc gagatggctg cgcagacgtt cgatggcggc gatgtaacca
     2161 ccgaggacct gccctgattc gggccccgcg agccgcgcct cgccgcgcac gtggcgcacc
     2221 gcacgaagga atggcgccgg atcgaagccg gcgagcgcgc cgacgcgagt cgccgtggcg
     2281 acgttctccg ctggcgggct ttcgccgtgc agtcgaagaa cggcgcggaa gaggacca
//
LOCUS       DASSYW010000464         2499 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1750346, whole genome shotgun sequence.
ACCESSION   DASSYW010000464 DASSYW010000000
VERSION     DASSYW010000464.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2499)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2499)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2499
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1750346"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1549)
                     /locus_tag="VFN38_07430"
     CDS             complement(<1..1549)
                     /locus_tag="VFN38_07430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011632.1"
                     /translation="MTRRDRLAMATVALLALAATITSIGHDYTFDDVYIIRNNARVHE
                     LGKIWRLFGQTYWPAQLGADGYRPLVMSLFTIQFVAGNSAPWVLHLGNILLAIAAALS
                     VYWCARAILPPAGSWVAGALFAVHPVHVEVTGNMVGQSELLVAIFLSLAVGHYIRARR
                     GGLLGVRDAAIVLGLFVLGLLSKEHAIVLPVLLVAAELTVINDRRWKLFAPEARDARL
                     LALCFALLIAVWLYVRSVVQMNLTGFVPYPVFQVLKMDMFDRFAMMMTEIPRIAQLLV
                     FPTRLSGDYSPGEVLIPQGFELVELPGIFICIAVVALAFALRRRAPAASFGLAWLILS
                     YLPVSNILVATGFITAERTLFFPSIGVVLVAGAGFEWLRGSERTLLQRRAAAVGVALL
                     LALGVARSIDRQRVWKNNDVFFDQLVLDAPNGYRAHFLRGRQVGSHTQLRQTELEYKH
                     AIRLFPYDVSMTLVIASDYHRAGMCGPAVALLRWTYSVEPSITDGRYEFGDCLAKMGL
                     WSESRSAA"
     gene            complement(1546..2349)
                     /locus_tag="VFN38_07435"
     CDS             complement(1546..2349)
                     /locus_tag="VFN38_07435"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HET9011633.1"
                     /translation="MTTPRLPSAHLTPSMGVPALTKLTLAAKPRELTPLDPAKMRLSV
                     LIPIYNERNTIETILDRVHASPVRKEIICVDDCSTDGTRERLQELQAAGYIHKLILQP
                     QNRGKGAAIRTALAASTGEIVIVQDADLEYDPQDWPALLQPIIDGKADACFGSRFLGG
                     PHRVLYYWHSVGNTILTTFCNMLVNLNLTDMETCYKAVRGELARDLKLTSDRFGFEPE
                     ITARLAQRDARIYEVPISYAGRTYAEGKKINWRDGIAAFWHMLRFGLTR"
BASE COUNT          430 a          810 c          880 g          379 t
ORIGIN      
        1 gggcggcgct gcgcgattcg ctccacagcc ccatcttcgc caggcagtcg ccgaattcgt
       61 accggccgtc ggtgatcgac ggctccaccg agtaggtcca ccgaagcagc gccaccgcgg
      121 gtccgcacat cccggcacga tgatagtccg aggcgatcac gagcgtcatg gacacgtcgt
      181 acgggaagag acggatcgcg tgcttgtact cgagctccgt ctggcgaagc tgggtgtgcg
      241 agcccacctg gcgaccgcgc aggaagtgcg cgcgatagcc gttgggcgcg tcgagcacga
      301 gctggtcgaa gaacacatcg ttgttcttcc agactcgctg ccggtcgatg cttcgcgcga
      361 cgccgagcgc caggagcagc gccaccccga cggcggcggc gcgccgctgc agcagcgtcc
      421 gttcgctccc gcgcagccac tcgaagcctg cgcccgccac cagcaccacg ccgatgctgg
      481 gaaagaagag cgtgcgctcg gccgtgatga agcccgtcgc gacgagaatg ttgctcaccg
      541 gcaggtagct gaggatgagc cacgcgaggc cgaagctcgc cgcgggagcc cggcgccgca
      601 gcgcgaaggc cagcgcgacc acggcgatgc agatgaagat gccgggcagc tcgaccaact
      661 cgaagccctg cgggatcagc acttcgcccg gcgagtagtc gccgctcagg cgcgtcggga
      721 agacgaggag ctgtgcgatg cgcggaatct ccgtcatcat catcgcgaac cggtcgaaca
      781 tgtccatctt cagcacctgg aagacggggt acggcacgaa cccggtgagg ttcatctgca
      841 cgaccgagcg tacgtacagc cagacggcga tgagcagcgc gaagcagagc gcgaggagcc
      901 gcgcgtcacg cgcttccggc gcgaagagct tccatcggcg gtcgttgatc accgtgagct
      961 ccgccgccac gagcagcacg ggcagcacga tggcgtgctc cttcgagagc agtccgagca
     1021 cgaacagacc gaggacgatc gccgcatcgc gcaccccgag cagtcccccg cgtcgggcgc
     1081 ggatgtagtg gcccacggcg agcgacagga agatcgcgac gagcagctcg gactgcccca
     1141 ccatgttgcc ggtgacttcc acgtgcaccg ggtgcacggc gaacagcgcg cctgccaccc
     1201 acgatccggc cggcggcagg atggcgcgcg cgcaccagta caccgagagt gcggccgcga
     1261 tggccagcag gatgttgccc aggtgcagga cccacggcgc gctgtttccc gccacgaact
     1321 ggatggtgaa cagcgacatc acgagcggtc gatagccgtc ggcgccgagc tgcgccggcc
     1381 agtacgtctg tccgaacagc cgccagatct tgcccagctc gtgcacgcgg gcattgttcc
     1441 ggatgatgta gacgtcgtcg aaggtgtagt cgtggccgat gctcgtgatc gtcgcggcga
     1501 gcgcgaggag ggccacggtc gccatggcga gccgatcgcg acgtgtcatc gcgtgagtcc
     1561 gaagcgcagc atgtgccaga acgcggcgat cccgtcgcgc cagttgatct tcttcccttc
     1621 ggcgtatgtg cgcccggcgt atgagatggg cacctcgtag atacgggcgt cccgctgcgc
     1681 cagccgcgcc gtgatctcgg gctcgaagcc gaagcggtcc gacgtgagct tgaggtcgcg
     1741 cgccagctcg ccccgcaccg ccttgtagca cgtttccatg tcggtgaggt tcaggttcac
     1801 cagcatgttg cagaaggtgg tgaggatggt gttgccgacg gagtgccagt agtagagcac
     1861 gcggtgcggg ccgcccagga accgtgagcc gaagcacgcg tcggcctttc cgtcgatgat
     1921 cggctgcagc agcgccggcc agtcctgcgg gtcgtattcc aggtcggcgt cctgcacgat
     1981 cacgatctcg cccgtgctcg cggcgagcgc ggtccggatc gccgcaccct tgccgcggtt
     2041 ctgcggctgc aggatgagct tgtggatgta gccggccgcc tgcagctcct ggagccgttc
     2101 gcgcgtgccg tcggtggagc agtcatccac gcagatgatc tccttccgca ccggcgacgc
     2161 gtgcacgcga tcgaggatcg tctcgatcgt gttccgctcg ttgtagatgg gaatgagcac
     2221 ggacaggcgc attttcgccg gatcgagcgg cgtgagctcc cgcggcttgg cggcgagcgt
     2281 gagcttcgtg agcgccggca cgcccatcga tggcgtgagg tgggcggagg ggagacgagg
     2341 cgtggtcatt tcggtaggac ggaataggcg acgccgccgg gaaagtccgc gcgcagcgcg
     2401 agcggcgggg tcggcgaatg aacgagatgg tccgccgcat cgacggtctt gcggcttccg
     2461 acgatcaccg tgcgcacggg atacgcggcg aggatgggc
//
LOCUS       DASSYW010000465         2690 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_534416, whole genome shotgun sequence.
ACCESSION   DASSYW010000465 DASSYW010000000
VERSION     DASSYW010000465.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2690)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2690)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2690
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_534416"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..297)
                     /locus_tag="VFN38_07440"
     CDS             complement(<1..297)
                     /locus_tag="VFN38_07440"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015022.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016758 - hexosyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0030259 - lipid glycosylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HET9011634.1"
                     /translation="MTMPQERFRTILIMAAGTGGHIFPGLAIAAELEKRGWTVHWMGT
                     PWGMENRIVGEVGYPMTTVNISGVRGKGLAAWVFLPFRILVGFCQATFALFRIRP"
     gene            complement(294..1442)
                     /gene="ftsW"
                     /locus_tag="VFN38_07445"
     CDS             complement(294..1442)
                     /gene="ftsW"
                     /locus_tag="VFN38_07445"
                     /inference="COORDINATES: protein motif:HMM:TIGR02614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative lipid II flippase FtsW"
                     /protein_id="HET9011635.1"
                     /translation="MLYNPARRQSSLDPALIWSAALLASIGLVMVYSASIAMAEAERF
                     TGFRPGYFLTRHSVYMAIGLAFAAALFRVPVWLWQKAAPWLFLAGSLALVAVLIPGLG
                     REVNGARRWIPLGLATFQPSEVMKLLVVLYAADYTVRKAAFMDDFRKGFLPMFAVMTL
                     IAALLLREPDFGALVVVTAIAMAVLFLGGLNWRLFAGLAALLAVAFCALIVSSPYRLQ
                     RILGFMDPWSDAYGKGYQLSHSLIAFGRGEWTGVGLGASVEKLFYLPEAHTDFLLAVI
                     AEELGFAGVAAVITLFLFLVHRAFAVGRQAASLERYFAALVAQGIGVWLAVQSFINMG
                     VNMGLLPTKGLTLPLLSFGGTGIVMSCLAIAILLRIDYESRYLMKGRA"
     gene            complement(1442..>2690)
                     /gene="murD"
                     /locus_tag="VFN38_07450"
     CDS             complement(1442..>2690)
                     /gene="murD"
                     /locus_tag="VFN38_07450"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR01087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008764 -
                     UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HET9011636.1"
                     /translation="RAAPPGLAQVRSGYPQVDARTGPFDQALLEGVDTVVASPGVALR
                     EPVLAAAAARGLPVVGDVEIFAREVRAAGKARVIGITGTNGKSTVTALAGEMGRIAGL
                     RTVVAGNIGEPVLDALDEHPDAQLYVIELSSYQLETTASLALEAAAMLNLTQDHMDRY
                     DSMADYARAKERIFRHADRRIVNRDDAWSRAMGDASSFSFGLGEPRNDNEWGLDATRA
                     RILRGKDEVLELGDMALTGLHNAANAMAAHALGTALELPPWALTQALREFAGLPHRVE
                     LVARAKGISFYDDSKGTNVGASVAALEGFRERVVLIAGGDGKGQDFAPLLPAVKAHAR
                     AVVLIGRDAPALAATLVEANVPLANATSMDEAVEASYALAHKGDAVLLSPACASFDMF
                     RNYEHRGDVFAAAARAIAERDGP"
BASE COUNT          432 a          945 c          960 g          353 t
ORIGIN      
        1 gggccggatg cggaacaacg cgaaggtggc ctggcagaag ccgaccagga tccggaaggg
       61 caggaacacc cacgcggcga gccccttgcc gcgcaccccg ctgatgttca ccgtggtcat
      121 ggggtagccg acctcgccca cgatccggtt ctccatgccc cagggcgtgc ccatccagtg
      181 gacggtccag ccgcgcttct cgagctccgc ggcgatcgcc agccccggga agatgtggcc
      241 cccggtgccc gcggccatga tgaggatcgt gcggaatctt tcctggggca tcgtcatgcg
      301 cgccccttca tcaggtagcg gctttcgtag tcgatgcgca gcaggatcgc gatcgcgagg
      361 cagctcatca cgatgccggt gccgccgaag gacagcagcg gaagcgtgag gcccttggtc
      421 ggcagcagcc ccatgttcac gcccatgttg atgaacgact gcaccgcgag ccacacgccg
      481 atgccctgcg ccaccagcgc cgcgaagtag cgctcgaggc tcgccgcctg gcgcccgacc
      541 gcgaacgcgc ggtggacgag gaagaggaag agcgtgatca cggctgccac gccggcgaag
      601 cccagctcct cggcgatcac cgccagcagg aagtcggtgt gcgcctccgg aagatagaag
      661 agtttctcga ccgaggcgcc caggcccacg ccggtccatt cgccgcggcc gaacgcgatc
      721 agcgagtgcg acagctggta gcccttcccg tacgcgtcgg accacgggtc catgaagccg
      781 aggatgcgtt gcagccggta gggcgacgag acgatgagcg cgcagaacgc cacggcgagc
      841 aacgccgcga ggccggcgaa caggcgccag ttgaggccgc ccaggaagag caccgccatg
      901 gcgatcgcgg tcaccacgac cagcgcgccg aaatccggct cgcgcagcag cagcgcggcg
      961 atgagcgtca tcaccgcgaa catgggcagg aatcccttgc ggaagtcgtc catgaaggcg
     1021 gccttgcgca ccgtgtagtc ggccgcgtag agcaccacca ggagcttcat cacctcggaa
     1081 ggctggaagg tcgcgagccc gagcgggatc cagcgccgcg cgccgttcac ctcgcggccg
     1141 aggccgggga tgaggacggc cacgagcgcc agcgagcccg cgaggaaaag ccacggcgcc
     1201 gccttctgcc acagccacac cggcacgcgg aagagcgccg ccgcgaacgc gaggccgatg
     1261 gccatgtaga ccgaatggcg cgtgaggaaa tagccggggc ggaacccggt gaagcgctcc
     1321 gcctccgcca tggcgatcga ggccgaatac accatcacca gcccgatgga ggcgagcagc
     1381 gccgccgacc agatgagggc gggatcgagg ctcgactggc gccgggcggg gttgtagagc
     1441 atcagggccc gtccctctcg gcgatggcgc gcgccgcggc ggcgaacacg tcgccccggt
     1501 gctcgtagtt gcggaacatg tcgaagctcg cgcacgcggg cgagagcagc accgcgtcgc
     1561 ccttgtgggc gagcgcgtag gaggcctcga ccgcctcgtc catcgaggtg gcgttggcga
     1621 gcgggacgtt ggcctcgacc agcgtggcgg cgagcgccgg ggcgtcgcgc ccgatcagca
     1681 ccacggcgcg cgcatgcgcc ttcaccgccg gcagcagcgg cgcgaagtcc tggcccttgc
     1741 cgtcgccgcc cgcgatcagc accacgcgct cgcggaagcc ttcgagcgcc gccaccgatg
     1801 cgccgacgtt ggtgcccttc gaatcgtcgt agaaggagat gcccttggcg cgcgccacga
     1861 gctccacgcg atgcggcagc cccgcgaact cgcgcagcgc ctgcgtgagc gcccacggcg
     1921 gcagctccag cgccgtgccg agcgcgtggg cggccatcgc gttggcggcg ttgtgcaggc
     1981 cggtgagcgc catgtcgccc agctcgagga cctcgtcctt gccgcgcagg atgcgcgcgc
     2041 gcgtggcgtc caggccccac tcgttgtcgt tgcgcggctc gcccaggccg aacgagaacg
     2101 agctcgcgtc gcccatggcg cggctccacg catcgtcgcg gttcacgatg cggcggtcgg
     2161 cgtggcggaa gatgcgctcc ttggcgcgcg cgtagtcggc catggagtcg tagcggtcca
     2221 tgtggtcctg cgtgaggttc agcatcgcgg ccgcctcgag cgcgaggctc gccgtggtct
     2281 cgagctggta gctcgacagc tcgatcacgt agagctgcgc gtccgggtgc tcgtcgagcg
     2341 cgtccagcac cggctcgccg atgttgccgg cgaccaccgt gcgcaggccg gcgatgcgtc
     2401 ccatctcgcc ggcgagcgcg gtcacggtgg acttgccgtt ggtgccggtg atgccgatca
     2461 cccgcgcttt tcctgccgcg cggacttcac gggcgaagat ctcgacgtcg ccgaccaccg
     2521 ggaggccgcg ggccgccgct gcggcgagga ccggctcgcg cagcgcaacg cccggactcg
     2581 caacgaccgt gtccactcct tccagtaggg cttggtcgaa gggtcccgtc cgggcgtcga
     2641 cctgcgggta tcccgatcgg acctgcgcca gcccgggagg cgccgcgcgg
//
LOCUS       DASSYW010000466         2131 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_358958, whole genome shotgun sequence.
ACCESSION   DASSYW010000466 DASSYW010000000
VERSION     DASSYW010000466.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2131)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2131)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2131
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_358958"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2131
                     /locus_tag="VFN38_07455"
     CDS             <1..>2131
                     /locus_tag="VFN38_07455"
                     /inference="COORDINATES: protein motif:HMM:NF013491.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="PEP/pyruvate-binding domain-containing protein"
                     /protein_id="HET9011637.1"
                     /translation="DVEFPRDGRIVRDAGLEFARRVRERQPDVPIMLQSTRVENQWQA
                     RDAGASFLLKGSSTLLHQLRRFMVDQLGFGDFVFRTPDGREVARARDLRELEERLVTV
                     PGQSPAYHGERNHFSNWFKARTEFALADRLRPRKVSDFATVEDLRQELLRAIHEYRRD
                     TSRGAVVDFDSAAFDRDTAFSRIGRGSLGGKARGLAFVDTLLLKSGVGQRFPAINITV
                     PQAVVLATDLFDDFLERNDLRDLGLESADDHEIERRFVAADLPPAAERDLASLVATTP
                     YPLAVRSSSLLEDSQYQPFAGIYATYMLPNDHDRADVRLRQLLTAIKRVYASTFSRAA
                     KRYLDETPYRLEEEKMAVVLQRVVGGRHGQRFYPDVTGVARSHNFYPLAPMRQEDGLA
                     AVALGLGETVVTGGACFRFCPRYPRHIVQFSSVQDTLTNAQRDFFALELGRGSSTPFA
                     PALFDLEAAEEDGTLAAVGSTFSPENDVVYDGISRPGVRLVTFAPMLKHGLFPLAELV
                     EALLQMCVEGTGVPVEVEFAVHLHAQVPEFGVLQLRPLGRVREVHEPDLPTVARHRLI
                     CASDAALGHGVIDGVRDLVVIDAHRFDRLRTREIARAVAQFNADLTARRRPYVLIGVG
                     RWGSADPLLGVPVTWDQIAGARAIVEAGFADFRVTPSQGSHFFQNLAAGNIGYFTVNP
                     EVGDGFVDWDWLAAQPAVTETEFVRHVR"
BASE COUNT          304 a          723 c          748 g          356 t
ORIGIN      
        1 cggatgtcga gtttccccgc gacggccgca tcgtgcgcga cgcggggctc gagttcgcgc
       61 ggcgggtgcg cgaacggcag cccgacgtgc cgatcatgct ccagtcgacg cgggtcgaga
      121 accagtggca ggcgcgcgac gcgggcgcgt cgttcctgct caagggatcc tcgacgctgc
      181 tgcaccagct gcggcgcttc atggtggatc agctcggctt cggcgatttc gtgttccgga
      241 cgcccgacgg ccgggaggtg gcgcgcgccc gcgacctgcg tgagctcgaa gagcgcctgg
      301 tcaccgttcc cggccaaagc ccggcctacc acggcgagcg caaccacttc tcgaactggt
      361 tcaaggcacg caccgagttt gccctcgccg atcggctgcg gccgcgcaag gtctcggact
      421 tcgccaccgt ggaggatctg cggcaggagc tgctgcgcgc catccacgag taccgtcgcg
      481 acacgagccg cggcgccgtc gtcgatttcg acagcgcggc gttcgatcgc gacaccgcgt
      541 tcagccgcat cggccgcggg tcgcttggcg gcaaggcccg gggcctcgcc ttcgtcgaca
      601 cgctcctgct gaagtcaggc gtcggccagc ggttcccggc gatcaacatc acggtgccgc
      661 aggcggtggt gctggcgacc gatctgttcg acgactttct cgagcggaac gatctccgcg
      721 accttgggct ggagagcgcc gacgaccacg aaatcgagcg gcgcttcgtc gcggccgatc
      781 tgccgccggc ggccgaacgc gatctggcgt cgttggtcgc gaccacgccg tacccgctcg
      841 cggtccgctc gtcgagcctg ctcgaggact cgcagtacca gccgttcgcc ggcatctatg
      901 cgacctacat gctgccgaac gatcacgacc gggccgacgt ccggctgcgc cagctgctca
      961 cggcgatcaa gcgggtctac gcctcgacat tcagccgcgc ggccaagcgc tacctcgacg
     1021 agacgccgta ccgcctcgaa gaagagaaga tggcggtggt gctgcagcgc gtggtcggcg
     1081 ggcggcatgg acagcgtttc tatccggacg tcaccggcgt cgcgcggtcg cacaacttct
     1141 atccgctggc gccgatgcgc caggaggacg gcctcgccgc cgtcgcgctc ggactcggcg
     1201 aaaccgtggt gaccggcggc gcctgcttcc ggttctgtcc acggtatccg cgtcacatcg
     1261 tgcagttctc gtcggtgcag gacacgctga ccaacgcgca gcgggacttt ttcgcgctcg
     1321 agctcggccg cggcagctcg acgccgttcg cgcccgcact gttcgacctc gaggcggcgg
     1381 aggaggacgg cacgctggcg gccgtcggct ccaccttttc accggaaaac gacgtcgtct
     1441 acgacggcat ctcgcggccg ggcgtcaggc tcgtgacgtt tgcgccgatg ctgaaacacg
     1501 gcctgttccc gctggcggag ctcgtcgagg cgctgctcca gatgtgcgtg gaggggacgg
     1561 gtgtgccagt ggaagtcgag ttcgccgtgc atctccatgc tcaggtgccc gagtttggcg
     1621 tcctgcagtt gcgaccgctg gggcgcgtgc gcgaggtgca tgaaccggat ctgccgacgg
     1681 tggcgcgcca ccggttgatc tgcgccagcg acgcggcgct cggacacggc gtcatcgacg
     1741 gcgtccgcga cctcgtggtg atcgacgccc accgcttcga tcggttgagg acgcgtgaga
     1801 tcgcgcgagc cgtcgcgcaa ttcaacgccg acctgacggc gcggcggcgg ccgtacgtgc
     1861 tgattggcgt cggccgctgg gggtcggccg atccgctgct cggcgtgccc gtgacctggg
     1921 atcagattgc cggcgcgcgc gcgatcgtcg aggccgggtt cgcagacttt cgcgtcacgc
     1981 cgtcacaggg aagtcatttc tttcagaatc tggcggcggg caacatcggc tacttcaccg
     2041 tgaatccgga ggtcggcgac ggcttcgtcg attgggactg gctggcggca cagccggcgg
     2101 tgacggagac cgaattcgtc cggcacgtgc g
//
LOCUS       DASSYW010000467         3194 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_229282, whole genome shotgun sequence.
ACCESSION   DASSYW010000467 DASSYW010000000
VERSION     DASSYW010000467.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3194)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3194)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3194
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_229282"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..356
                     /locus_tag="VFN38_07460"
     CDS             <1..356
                     /locus_tag="VFN38_07460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011638.1"
                     /translation="LPAFAATATAADRAPLQPGGGATSCVPRTPTGAGGALECGTLFE
                     AMKWEKRIETIFSGYAQWFQDSRGWGDLPVGTPTMWPVPFQEMDARREAFYNSLAGPQ
                     WISAGSSYGFGAGNR"
     gene            358..873
                     /locus_tag="VFN38_07465"
     CDS             358..873
                     /locus_tag="VFN38_07465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011639.1"
                     /translation="MTRHASHHRGTPRSTLASARRTGVWAAVLATSVSSLAGCYATHP
                     LTTAPVPGTTVVLDLNDRARVQLGDRIGPSAASIEGVVQPAGDSGYVINISSVKYLNG
                     QTNQWSGERFTLSPTLVTQAWQREFSRSRTMSLGLGIAAAIAAIVLKTDFLSKTGGGQ
                     PTNPPPPTGGT"
     gene            923..1768
                     /locus_tag="VFN38_07470"
     CDS             923..1768
                     /locus_tag="VFN38_07470"
                     /inference="COORDINATES: protein motif:HMM:NF025702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4397 domain-containing protein"
                     /protein_id="HET9011640.1"
                     /translation="MRFSRLSLLPLALIAAAACHDDSVSVNTRPPLGGVRFVNAVPDG
                     GPVDIRMVDQVEWSANSVSDNTACCGLPFRGGTIHWATEAKARHIRVFPTDSSLAVTT
                     QILHDTTITIEANKNITLMLVGSRAAGGKVSFVTIDDNPGAVPATQIATRLVNAGSTA
                     QPGSASGYITATASTPLPASATFPTVAPRSASAYVLRNTGAFAFQATPAGDNTTIWAA
                     SSAPTGAPADGLIGATAGATGGGSAFSAYLFPRSVAGTAAPQSAAFQVPALVYFVDLV
                     PAPPK"
     gene            complement(1839..2210)
                     /locus_tag="VFN38_07475"
     CDS             complement(1839..2210)
                     /locus_tag="VFN38_07475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011641.1"
                     /translation="MSVLRLLTALAFIGTAACAPATASAGNDTPPRGDSKTVTEAELA
                     VATQLNLYDYVAAERPRWLRVSRGLPLVIYVEDTRLGGPSTLKTLTTNTVRMLRYYEA
                     SAAQAKFSGRDIGTVIQVIIK"
     gene            2406..2810
                     /locus_tag="VFN38_07480"
     CDS             2406..2810
                     /locus_tag="VFN38_07480"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HET9011642.1"
                     /translation="MHTGEPALPPILVVDDNHDNAEIIRQYLEIRGYPISVAHNGDEA
                     LALYETVKPALVLLDVMMPGRDGWEVCRIMKQHPTLGHKVRVIMVTALDAWDDKREAL
                     QLGADDYVEKPFDLPTLAKTVQRNLDQMRVAS"
     gene            2847..>3194
                     /locus_tag="VFN38_07485"
     CDS             2847..>3194
                     /locus_tag="VFN38_07485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011643.1"
                     /translation="MSESVLLTDTDDATVRQAVAQLDGWRADLRTAADLPGALAEPGV
                     RAVLLTTTEPTELRAGIEQAHLRGVPVLVGCADEAQRRRAVELKAEEWFLLPATADEI
                     AARTWSAVARGTGL"
BASE COUNT          475 a         1127 c         1119 g          473 t
ORIGIN      
        1 gcctgcctgc cttcgccgcg acggccaccg cggccgatcg cgcaccgctg cagccgggcg
       61 gcggcgcgac gtcgtgcgtg ccgcgcacgc cgaccggtgc gggcggcgcg ctggagtgcg
      121 gcaccctgtt cgaggcgatg aagtgggaga agcgcatcga aacgatcttc tccggctacg
      181 cgcagtggtt ccaggactcg cgtggatggg gcgatctgcc cgtggggacg ccgacgatgt
      241 ggccggtgcc cttccaggag atggatgctc gccgcgaggc cttctacaac tcgctcgcgg
      301 gtccgcagtg gatctcggcc ggcagcagct acggcttcgg cgcggggaat cgctgagatg
      361 acgcggcacg cctcccacca ccgtggcact ccgcgctcga cgctcgcgtc ggcacggcgc
      421 accggcgtgt gggcggccgt gctggcgacc agcgtctcgt cgctcgcggg ctgctacgcg
      481 acgcatccgc tgacgacggc gccggtgccc ggaacgacgg tcgtgctgga tctcaacgat
      541 cgcgcccggg tgcagctggg ggaccgcatc ggtccctcgg ccgccagcat cgaaggggtc
      601 gtgcagccgg caggcgacag cggctacgtg atcaacatct cttcggtgaa gtacctgaac
      661 ggccagacca atcaatggtc gggggagcgt ttcacgctct cgccgactct cgtgacccag
      721 gcgtggcagc gcgagttctc ccggtcgcgc acgatgtccc tcgggctcgg tatcgcggcg
      781 gcgatcgcgg cgatcgtgct caagacggac ttcctcagca agacgggagg cggacagccg
      841 accaatccac ctcccccgac cggtggcacc tgagcacgcc cttgccccgc acctccactt
      901 cacgactcaa ggccacactc ccatgcgttt ttcccgactc tcgctgctgc cgctggctct
      961 gatcgccgct gcggcctgcc acgacgatag cgtctcggtc aacacccgac cgccgctcgg
     1021 tggcgtgcgg ttcgtcaatg ccgttcccga cggcggcccg gtcgacatcc ggatggtcga
     1081 ccaggtcgaa tggtcggcca actccgtctc ggacaacacg gcgtgctgcg gcctgccgtt
     1141 tcgcggtggc accatccact gggcgacgga agccaaggcg cggcacatcc gcgtcttccc
     1201 gaccgattcg agcctggcgg tgacgacgca gatcctgcac gacacgacga tcacgatcga
     1261 ggcgaacaag aacatcaccc tcatgctcgt gggcagccgg gcggcgggtg gcaaggtgag
     1321 cttcgtgacg atcgacgaca atccgggcgc cgtgccggcg acgcagatcg ccacgcggct
     1381 cgtgaacgcg ggcagcacgg cgcagcctgg gagcgcatcc ggctacatca cggcgacggc
     1441 gtcgacgccg ctgccggcgt cggcgacctt ccccacggtg gcaccccgtt ccgcgtccgc
     1501 ctacgtgctt cgcaacaccg gcgcgttcgc cttccaggcc acaccggcgg gcgacaacac
     1561 gacgatctgg gccgcctcct cggccccgac gggcgcgccc gccgacggtc tgatcggcgc
     1621 aacggcgggt gccacgggtg gcggcagcgc cttctcggcg tatctgttcc cgcggtcggt
     1681 cgccggaacc gcggcgccgc agtcggcggc gttccaggtg ccggcgctcg tgtacttcgt
     1741 cgatctcgtc ccggcgccgc cgaagtaggc ctttcgaggt catgttgacg aggggcgggt
     1801 ccgcatgcgg gcccgcccct cttcaccttt ggccggcgct acttgatgat gacctggatg
     1861 acggtcccga tgtcccgccc gctgaacttc gcctgggctg ccgaggcttc gtagtagcgc
     1921 agcatgcgga cggtgttcgt cgtgagcgtc ttcagcgtcg aggggccgcc gaggcgggtg
     1981 tcttcgacgt agatgaccag ggggagaccg cggctgacac ggagccagcg tggacgctcg
     2041 gcagcgacgt agtcgtagag gttgagctgc gtggcgaccg ccagctcggc ttcggtcacc
     2101 gtcttggaat cgccgcgggg cggagtgtcg ttgccggcgc tggcagtggc gggagcgcag
     2161 gcggcggtcc cgatgaacgc gagggcggtg agcaggcgaa ggacggacat gagccgaaca
     2221 tcgccccggc gccctccgga cgccagcccg ccgccgcgcc gcgacccgct cgacagccgg
     2281 tcccccttcc agaaacgggt gttcgaacgc tcggggagtc cacggattgg cccccgactt
     2341 gccctgaata tccggacgca ctccgtccgg gggtgcccaa ggccgtggac gcaggagagt
     2401 attcggtgca cactggggag cccgcgctgc cgccaatcct ggtggtggat gacaatcacg
     2461 acaacgcgga gatcatccgg cagtacctgg agatccgcgg ctacccgatc tccgtcgcgc
     2521 acaacggaga cgaagcgctc gcgctgtacg agacggtgaa gcctgccctc gtgctgctcg
     2581 acgtgatgat gcccgggcgc gacgggtggg aggtgtgccg catcatgaag cagcacccga
     2641 cgctcggcca caaggtgcgc gtcatcatgg tgacggccct cgacgcgtgg gacgacaaac
     2701 gcgaggcgct gcagctcggc gccgacgact acgtggagaa gccctttgat ctgccgacgc
     2761 tcgccaagac tgtgcagcgc aacctcgacc agatgcgcgt cgcgtcgtag cgacgcggcg
     2821 cgtcccgcca ccaccccgcg ggacgcgtga gcgagtcggt cctcctcacc gatacggacg
     2881 acgcgacggt ccgccaggcg gtcgcccagc tcgacgggtg gcgcgccgac ctgcgcaccg
     2941 ccgccgacct tcccggcgcg ctcgcggagc cgggggtacg tgccgtgctc ctgacgacca
     3001 cggagcccac ggagctccgg gccggcatcg agcaggcgca cctgcgcggc gttcccgtgc
     3061 tcgtcggctg tgcggacgag gcacagcgcc gccgcgccgt ggagctcaag gccgaggagt
     3121 ggttcctgct gccggcgacc gccgacgaga tcgcggcgcg cacctggtcc gccgtcgcgc
     3181 gaggcaccgg actg
//
LOCUS       DASSYW010000468         2815 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_702907, whole genome shotgun sequence.
ACCESSION   DASSYW010000468 DASSYW010000000
VERSION     DASSYW010000468.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2815)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2815)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2815
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_702907"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2257
                     /locus_tag="VFN38_07490"
     CDS             <1..2257
                     /locus_tag="VFN38_07490"
                     /inference="COORDINATES: protein motif:HMM:NF019911.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PEGA domain-containing protein"
                     /protein_id="HET9011644.1"
                     /translation="HEAFGRVRAVERLDARSSTIVIISDHVRGVRLSEVLAGARKRGI
                     PLEYSAATWLIRQLVSAMAALHDSGPGVCHGAISPERLVVTPDGRLVVVEYVLGRALE
                     EMHFSWERYWRELGIALPRPIGLSRFDQTADVTQMAAVALALLLARPLTGDEYPHKIA
                     DVLDSATARQIDSSDPLPAALRTWLRRALHIEPRAAFASAIEAQTELDRVLDVQDAAG
                     RLSLRSFLSRYAAAMALERQMASQPKPEPVPMPVEAPKAPVAIETTVAPVPVEPVPAP
                     LMAEVPVPELVATVAPEAEPSVFAAPVALAHDDEDDVPVPALFGSSTSATEEAEAEPE
                     VDVPFMPPPAPPLTASVTPFTPRASAFAAATAEKAAPEVRMPLPESGPWANPGPESVP
                     SATTKEPDMPRIDKPMFEPAPVQPPVRESVRSKAGRPAWQSPWAVAAVLVLIAVSTGV
                     TFLGGGKTPAPAATPASTGTLEIGTNPDGIAVFIDGTNRGNTPLTVNLAAGAHVVELV
                     TDTDRRQVPVTMKAGTHMSHFIEMPKAAAGGVGDLMVRTNPSKANVTVDGKPYGQSPV
                     TVKGLTAGKHRVTLENESGSFADDVVIEAGATASLVVPMTKPSAGANVSGWIAINAPA
                     DLQVFEGGRLVGSSRTDRIMVAVGRHELEMVNEALGYRSTRTVDVAAGQVVSVRPDWP
                     KGTLAVNALPWAEVSIDGERVGETPIGSVSVPIGTHDIVFRHPELGERRTTATVTTGA
                     ATRVSMDMRAK"
     gene            2254..>2815
                     /locus_tag="VFN38_07495"
     CDS             2254..>2815
                     /locus_tag="VFN38_07495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011645.1"
                     /translation="MKALKTWLVAAGALLAAVAVASAQAPAPSSSLAAARTLYASAEY
                     GGALDMLNGLVSETPAGPERQAIDLYRALCFVAVGNSAEASKVIEAMIAQDPLYRPAA
                     DDVPPRLRSAFTDARRRMLPAIVQQNYVSAKASFDKKDYDKAAKGFTQVLAGLNDPDI
                     ENVAAQPPLSDLKMLATGFHDLAAKAA"
BASE COUNT          416 a         1010 c          989 g          400 t
ORIGIN      
        1 ccacgaggcg ttcgggcgcg tgcgcgccgt cgaacggctc gacgcgcgca gctctacgat
       61 tgtcatcatc tcggatcacg tgcgcggcgt gcgcctgtcg gaagtgctcg cgggggctcg
      121 taagcggggg attccgctcg agtactcggc ggcgacgtgg ctgattcgtc agctggtgtc
      181 cgccatggcc gcgttgcacg acagcgggcc cggtgtgtgc cacggcgcca tctcgcccga
      241 gcgcctcgtc gtgacgcccg acgggcgcct ggtcgtcgtg gaatacgtgc tcgggcgggc
      301 gctcgaggaa atgcatttct cgtgggagcg ctactggcgc gagctcggca tcgcgctgcc
      361 gcgccccatc gggctgtcgc ggttcgatca gacggccgac gtgacgcaga tggccgccgt
      421 ggcgctggcc ctgctgctgg cgcgtccgct caccggcgac gagtatccgc acaagattgc
      481 cgacgtgctc gacagcgcca ccgcgcgcca gatcgacagc tcggatccgc tgcccgccgc
      541 gctgcgcacc tggctgcgcc gggcgctcca catcgagccg cgcgcggcgt tcgcgtcggc
      601 catcgaagcg cagaccgagc tcgatcgcgt cctcgacgtg caggatgccg ccggccgtct
      661 ctcgctccgt tcgttcctgt cgcgctatgc ggcggcgatg gcgctcgagc gccagatggc
      721 ctcgcagcca aagcccgagc cggtgccgat gcccgtcgag gcgcccaaag ctccggtagc
      781 gattgaaaca acggtggcac ccgttcccgt cgagccggtc cccgcgccgt tgatggccga
      841 ggtcccggtg cccgaactcg tcgccaccgt ggcgcccgag gccgagccga gcgtgtttgc
      901 ggcgcccgtg gcgctggcgc acgacgacga ggacgacgtc cccgtgcccg ccctctttgg
      961 ttccagcacg tcggcgaccg aagaggccga ggccgaaccg gaagtagacg tcccgttcat
     1021 gcccccgccg gcgccgcctc tcaccgcgtc cgttacgccg ttcaccccgc gcgcctcggc
     1081 cttcgcggcc gcgacggcgg aaaaggcagc ccccgaggtg cggatgccgc tgcccgagtc
     1141 tggcccgtgg gcgaacccag gccccgaatc cgtaccgtcc gcgacgacga aggaacccga
     1201 catgccgcgc atcgacaagc ccatgttcga gcccgcaccg gtgcagccgc ccgtgcgtga
     1261 gtccgtccgc tccaaggccg gccgtccggc gtggcagagc ccgtgggccg tggccgcggt
     1321 gctggtgctg atcgccgtct cgaccggcgt gaccttcctg ggcggcggta agaccccggc
     1381 gcccgcggcg acgccggcga gcaccggcac gctggagatc ggcaccaatc ccgacgggat
     1441 tgccgtgttc atcgacggca ccaaccgggg caacacgccg ctcaccgtca accttgcggc
     1501 cggcgcgcac gtcgtcgagc tcgtcaccga cacggaccgc cgccaggtgc ccgtgacgat
     1561 gaaggccggc acgcacatgt cgcacttcat cgagatgccg aaggcggcgg ccggcggcgt
     1621 cggcgatctg atggtgcgca cgaatccgtc gaaggccaac gtcacggtgg acggcaagcc
     1681 gtatggccaa tcgccggtga cggtgaaggg gctcaccgcg ggcaagcacc gcgtcacgct
     1741 cgagaacgag tcgggcagct tcgcggacga cgtcgtgatc gaagccggcg ccacggcgtc
     1801 gctcgtcgtg ccgatgacga agccgtcggc gggcgccaat gtctccggtt ggattgcgat
     1861 caacgcgccg gcggacctgc aggtcttcga aggcggccgt ctcgtgggca gcagccgcac
     1921 cgaccgcatc atggtggccg tcggccgcca cgaactcgag atggtcaacg aggcgctcgg
     1981 ctaccgctcc accagaaccg tggacgtcgc ggcgggccag gtggtctcgg tgcggccgga
     2041 ctggccgaag ggcacgctcg cggtgaacgc gctgccgtgg gccgaggtgt cgatcgacgg
     2101 cgaacgcgtg ggcgagacgc cgatcggcag cgtgtcggtg ccgatcggca cgcacgacat
     2161 cgtcttccgt catcccgaac tgggcgagcg ccgcaccacg gccaccgtga ccacgggcgc
     2221 cgcgacgcgc gtcagcatgg acatgagggc gaaatgaagg ctctgaagac ctggctcgtc
     2281 gcggccggcg cgctgctggc cgctgttgcg gtggcatcgg cgcaggcacc ggcgcccagc
     2341 tcgtcgctgg ccgccgcgcg cacgctctac gcgtcggccg agtacggcgg ggcgctcgac
     2401 atgctcaatg ggctggtgtc ggaaacgccg gccggacccg agcgccaggc catcgatctc
     2461 tatcgcgcgc tgtgcttcgt ggccgtcggc aactcggccg aggcgtccaa ggtcatcgaa
     2521 gcgatgatcg cgcaggatcc gctctaccgc cccgcggccg acgacgtgcc gccgcgcctg
     2581 cggtccgcgt tcaccgatgc ccgccgcagg atgctgcccg ccatcgtgca gcagaactac
     2641 gtgtcggcca aggcgtcgtt cgacaagaag gactacgaca aggcggccaa aggcttcacg
     2701 caggtgctgg ccggcctgaa cgatcccgac atcgaaaacg tggcggcgca gccgccgctg
     2761 tcggatctga agatgctcgc caccgggttc cacgatctcg ccgccaaggc cgcgg
//
LOCUS       DASSYW010000469         2322 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_335056, whole genome shotgun sequence.
ACCESSION   DASSYW010000469 DASSYW010000000
VERSION     DASSYW010000469.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2322)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2322)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2322
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_335056"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..377)
                     /locus_tag="VFN38_07500"
     CDS             complement(<1..377)
                     /locus_tag="VFN38_07500"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HET9011646.1"
                     /translation="MADQVQETVQGDGYAVSSLDAMGDGPGFRKVRKEVGVTAFGINA
                     IVLPEGYVTGRHLHEEQEEVYIVHRGRIEMEFGDGSKHVLGEGGVARVDASTIRRTAN
                     VGEGEAIVIVAGGKDGYVGRDGKL"
     gene            complement(554..>2322)
                     /locus_tag="VFN38_07505"
     CDS             complement(554..>2322)
                     /locus_tag="VFN38_07505"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="bifunctional polysaccharide
                     deacetylase/glycosyltransferase family 2 protein"
                     /protein_id="HET9011647.1"
                     /translation="GSHVVEEPDIVRRLHDDGFELGNHTFGHADLSRIPEWRRALQLG
                     LTDNAIAGATGLRTRLVRPPYSATPDAVTPAQASAFRDVEKRGYLVALSDFDGRDWER
                     PGVDAIVRAITPPGREGGIVLLHDGGGDRSQTVAALERAVPRLRARGFRFVPLSEIAG
                     VTRAQAEPKASRWEGIRGSMLLGTLEVARFITDVITFLLLPIAFLALARILLLVALAR
                     RHVRAARLAERDPSFAPPVSILVPAYNEAVGIERAVRSLAASEYPDFEIVVVDDGSDD
                     GTGQLVERLELENVHVIHQPNGGKHAALNRAVAAARHDILVTVDADTVFEPETLRLLV
                     QAFRDEEVGAVSGNTKVGNRGGLLGRWQHIEYVMGFNLDRRLYDVLRCMPTVPGAIGG
                     FRRAALADAGGVSGATLAEDTDLTLAIGRAGWRVVYEEEARAWTEAPGSLSALWRQRY
                     RWSYGTMQAVWKHKGAITHRDQWRVGRLGIPYLVLFQIALPLLAPLIDVFAVYGIVFL
                     DPVPVVGYWLAFNVLQLGIGWYAFRLDRESPRPLWAMPLQQFVYRQLMYLVVIESVLS
                     AIAGTRIRWQQMERTGDVEVAR"
BASE COUNT          333 a          870 c          806 g          313 t
ORIGIN      
        1 agcttgccgt cgcgcccgac gtagccgtcc ttgccgccgg cgacgatcac gatcgcctcg
       61 ccctcgccta cgttcgccgt ccgcctgatc gtggacgcgt caacgcgcgc gacgccgccc
      121 tcgccgagca cgtgcttcga gccgtcgccg aactccatct cgatccggcc gcggtgcacg
      181 atgtagacct cctcctgctc ctcgtgaagg tggcgccccg tgacgtagcc ctcgggaagc
      241 acgatggcgt tgatgccgaa agcggtgacg ccgacctcct tgcggacctt gcgaaagccc
      301 ggtccgtcgc ccatcgcgtc gaggctcgaa accgcgtagc cgtcgccctg aaccgtctcc
      361 tgcacctggt cagccatgcc gcgcctccgt cgtcgggaac ccggcgcgga ccctacctgc
      421 ggcatctcgc gcagctagtg acatatcgca cgcaattgtg tacgatcacg gcctcggcgg
      481 tggccggtca ggggccgccg cagggcaagg caaagcgggc gtcccacggg gcgcccgccg
      541 actgttcggg cccctaccgc gccacctcga cgtcgccggt gcgctccatc tgctgccagc
      601 ggatccgcgt gcccgcgatc gcgctgagca ccgactcgat cacgacgagg tacatcagct
      661 gccggtagac gaactgctgg agcggcatcg cccacagcgg tcgcggcgac tcgcggtcga
      721 gccggaacgc gtaccacccg atcccgagct ggagcacgtt gaaggcgagc cagtagccga
      781 cgaccggcac cgggtcgagg aacacgatgc cgtacacggc gaacacgtcg atgagcggcg
      841 cgagcagcgg cagcgcgatc tggaacagca cgaggtacgg gatgccgagc cggccgacgc
      901 gccactggtc gcggtgcgtg atcgctccct tgtgcttcca gacggcctgc atcgtgccgt
      961 aggaccagcg gtagcgctgg cgccacagcg cgctcagcga ccccggcgcc tcggtccacg
     1021 cgcgcgcctc ctcctcgtac accacgcgcc agcccgcgcg gccgatggcg agcgtgaggt
     1081 cggtgtcctc ggccagcgtc gctcccgaca ccccgccggc gtcggccagc gccgcgcgcc
     1141 tgaagccgcc gatggcgccg ggcacggtgg gcatgcagcg cagcacgtcg tagaggcggc
     1201 ggtcgaggtt gaagcccatc acgtactcga tgtgctgcca gcggccgagc agcccgccgc
     1261 ggttgccgac cttggtgttg cccgacaccg cccccacttc ctcgtcgcgg aacgcctgca
     1321 cgagcagccg cagcgtctcg ggctcgaaca ccgtgtcggc gtccacggtc acgaggatgt
     1381 cgtgcctggc cgcggccacg gcgcggttca gcgccgcatg cttgccgccg ttcggctggt
     1441 ggatcacgtg cacgttctcg agctcgaggc gctccacgag ctgcccggtg ccgtcgtccg
     1501 acccgtcgtc caccaccacg atctcgaagt ccgggtactc gctcgcggcc agcgaccgga
     1561 cggcgcgctc gatgcccacg gcctcgttgt aggccggcac gaggatcgac accggcggcg
     1621 cgaacgacgg atcgcgctcg gcgagccgcg ccgcccgcac gtggcggcgc gcgagcgcga
     1681 cgagaaggag gatccgcgcg agcgcgagga aggcgatcgg cagcagcagg aacgtgatca
     1741 cgtcggtgat gaagcgcgcc acctcgagcg tgccgagcag catcgagcct cggatgccct
     1801 cccagcgcga cgccttcggc tcggcctgcg cgcgggtgac ccccgcgatc tccgacagcg
     1861 gcacgaagcg gaagccgcgc gcgcgcagcc gcggcaccgc gcgctcgagc gctgccacgg
     1921 tctgggagcg gtcgccgccg ccgtcgtgca gcagcacgat gcctccctcg cggccgggcg
     1981 gggtgatcgc gcgcacgatc gcgtccacgc cgggccgctc ccagtcgcgc ccgtcgaagt
     2041 ccgacagcgc gacgaggtag ccgcgcttct ccacgtcccg gaaggccgac gcctgcgccg
     2101 gggtgaccgc gtcgggcgtg gccgagtacg gcggccgcac gagccgcgtg cgcaggcccg
     2161 tggctccggc gatggcgttg tcggtgagac cgagctggag cgcccggcgc cactccggta
     2221 tccggctgag gtccgcgtgg ccgaaggtgt ggttgccgag ctcgaagccg tcgtcgtgca
     2281 ggcggcgcac gatgtccggc tcctcgacca cgtggctgcc ca
//
LOCUS       DASSYW010000470         2778 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_346053, whole genome shotgun sequence.
ACCESSION   DASSYW010000470 DASSYW010000000
VERSION     DASSYW010000470.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2778)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2778)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2778
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_346053"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..212
                     /locus_tag="VFN38_07510"
     CDS             <1..212
                     /locus_tag="VFN38_07510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="(2Fe-2S) ferredoxin domain-containing protein"
                     /protein_id="HET9011648.1"
                     /translation="REGLLFGPRRIKRGETPCLGVCAGGPIVVVYPDGIWYAGVTPAL
                     LERIVVEHLRDGRVVEEAVFHRHGG"
     gene            complement(217..528)
                     /locus_tag="VFN38_07515"
     CDS             complement(217..528)
                     /locus_tag="VFN38_07515"
                     /inference="COORDINATES: protein motif:HMM:NF013964.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease signature motif containing
                     protein"
                     /protein_id="HET9011649.1"
                     /translation="MRRERIFARDDYQCVYCGERFEPEALTVDHVQPKMRGGDRSGGN
                     LVTACGGCNARKGALRLSRFLHDDPVARAHFFALAARHVWPRILRTVAEELEQLGGRG
                     E"
     gene            552..857
                     /locus_tag="VFN38_07520"
     CDS             552..857
                     /locus_tag="VFN38_07520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011650.1"
                     /translation="MPSRRSLFDAAQRYLLEPDDEQLDRAGGDPPRLTTQAIQKVSMS
                     RSRERILANIDDMYREAFERAKAAGDDAQMATLDFAYRREQLYFEILLDVRDALERR"
     gene            complement(938..1915)
                     /locus_tag="VFN38_07525"
     CDS             complement(938..1915)
                     /locus_tag="VFN38_07525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HET9011651.1"
                     /translation="MVATNIWFWVGFVAFVLAMLALDLGVFNKTPHVVKAREAALWTS
                     IWVALALLFAGGLAWFVDHQTALTFLTGYVIEESLSVDNIFVIVLIFQYFAVPAKYQH
                     RVLFWGILGALVMRGVFIGVGAALLARFEWIIYIFGAILVVTGVRMAVKQDEEFDGEQ
                     NPVVKWVRRFLPVTHDYRGKHFFALENGRRHATPLFLVLVLVEATDLIFAIDSIPAIF
                     GITRDPFLVFTSNIFAVMGLRSLFFLLASVVTKFHLLKYGLAVILTFIGTKMLIEHWV
                     HIPIMVSLGVVLAVLVASIVASLVWPNARPASEGKTGSMFGTLPRSGPD"
     gene            2189..>2778
                     /locus_tag="VFN38_07530"
     CDS             2189..>2778
                     /locus_tag="VFN38_07530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HET9011652.1"
                     /translation="MPILRPAARCRAVRITVALTLASPTSARAMQQSATAPVPTIAPA
                     PAPLPALAIVNARVWTGDPRRPWADAILIRGERIETVGSSAEVKKRAGPSTRTLDARG
                     MMVTPGFVDAHVHFLDGGFALASVQLRDARTKAEFIERIRAFARSVPPGTWILNGDWD
                     HTSWGGELPARAWIDSVTPDNPVWINRLDGHMNLANS"
BASE COUNT          467 a         1020 c          894 g          397 t
ORIGIN      
        1 agcgggaggg tctgctgttc ggcccgcgcc ggatcaagcg cggggagacg ccgtgcctcg
       61 gcgtgtgcgc cggcgggccc atcgtcgtcg tgtatccgga cggcatctgg tacgccggcg
      121 tgacgccggc gctgctcgag cgcatcgtcg tcgagcacct gcgggacggg cgcgtcgtcg
      181 aggaggccgt cttccatcgt cacggcggct gaacggtcac tcgcctcgtc cgccgagctg
      241 ctccagctcc tcggccacgg tgcgcaggat ccgcggccac acgtgcctcg ccgcgagcgc
      301 gaagaaatgg gcgcgcgcca ccgggtcgtc gtgcaggaac cgggagagcc ggagcgcgcc
      361 cttcctcgcg ttgcaccccc cacacgccgt cactaggttc ccaccggagc gatcgccacc
      421 gcgcatcttc ggctgcacgt ggtccacggt gagcgcctcg ggctcgaagc gctccccgca
      481 gtacacgcac tgatagtcgt cgcgcgcgaa gatccgttcc cgtcgcaatg cacaaccccc
      541 tgcttccgtc catgccgtcc cgtcgctcgc tgttcgacgc ggcccagcgc tacctgctgg
      601 agcccgacga cgagcagctc gaccgtgccg gcggtgatcc gcctcgcctc accactcaag
      661 ccatccagaa ggtcagcatg tcccgctccc gcgaacgcat cctcgccaac atcgacgaca
      721 tgtaccgcga agccttcgag cgggccaagg ccgccggcga cgacgcccag atggcgacgc
      781 tcgacttcgc gtaccggcgc gagcagctgt acttcgagat cctgctcgac gtccgcgacg
      841 ccctcgagcg gcggtagtgt tgtcgtcctg atccgaaggc gaaggacctg cacgcaactg
      901 cacgcgcggg cccttcgctg cgctcaggac gacggtccta gtccggcccg ctccgcggca
      961 gcgtcccgaa catcgacccc gtcttcccct cgctcgccgg ccgcgcgttc ggccagacga
     1021 gcgaggcgac gatggacgcc accagcaccg cgagcaccac cccgagcgac accatgatcg
     1081 ggatgtggac ccagtgctcg atcagcatct tcgtgccgat gaaggtgagg atcaccgcca
     1141 gcccgtactt cagcaggtgg aacttcgtca ccacgctcgc gagcaggaag aagagcgacc
     1201 ggagccccat cacggcgaag atgttcgacg tgaagacgag gaacgggtcg cgcgtgatgc
     1261 cgaagatggc ggggatcgag tcgatcgcga agatcaggtc ggtcgcctcc accagcacca
     1321 gcaccaggaa cagcggcgtc gcgtggcgcc ggccgttctc gagcgcgaag aagtgcttgc
     1381 cgcgatagtc gtgcgtcacg ggaaggaacc gccgcaccca cttcacgacc gggttctgct
     1441 ccccgtcgaa ctcctcgtcc tgtttcacgg ccatgcgcac gccggtcacg acgaggatcg
     1501 cgccgaagat gtagatgatc cactcgaagc gcgccagcag cgccgcgccc acgccgatga
     1561 agacgccgcg catgacgagt gccccgagga tgccccagaa cagcacgcga tgctggtact
     1621 tcgccggcac ggcgaagtac tggaagatca gcacgatgac gaagatgttg tcgacgctga
     1681 gcgattcctc gatcacgtag ccggtgagga acgtcagcgc ggtctggtgg tcgacgaacc
     1741 acgcgagccc gccggcgaag agcagggcga gcgccaccca gatcgaggtc cacagcgcgg
     1801 cttcccgggc cttcacgacg tgcggcgtct tgttgaacac gccgaggtcg agcgccagca
     1861 tcgccagcac gaaggcgacg aacccgaccc agaaccagat gttggtggcg accatggagc
     1921 gcaggaccct cggaagcggt gagccggaaa cacgacgggc gagccactac ggcacggtcg
     1981 gtgtccgtag tggtctcgcc caaggctcga ctgcgccctt cagccgaccg gaggcgctcg
     2041 cgcgccccgt cttgacgatc ggctgctccg acgcgccgtt cccgagcgcg tcagccggct
     2101 actccccact gcgtatgaac gctcaccagt tgacgtccac ccgtcaagcg cccctttcgg
     2161 cgcgccggtc ggcgcgacag tctcccgcat gccgattctc cgccccgccg cgcgatgccg
     2221 cgccgttcgc atcaccgtcg cgctgacgct cgcgtcgccc acctccgccc gcgccatgca
     2281 gcagtccgca accgctcccg tgcccacgat cgcgcccgcg ccggcacccc tgccggcact
     2341 ggccatcgtg aacgcacgcg tgtggaccgg tgacccgcga cggccatggg ccgacgcgat
     2401 cctcatccgt ggtgagcgca tcgagactgt gggctccagc gcggaagtga agaagcgcgc
     2461 gggcccctcg accaggacgc tggacgcccg cggcatgatg gtcacgccgg gcttcgtgga
     2521 cgcgcacgtc cacttcctcg acggcgggtt cgccctcgcg tcggtgcagc tccgcgatgc
     2581 gcgcaccaag gccgagttca tcgagcgcat ccgtgccttc gcccgcagcg tgccccccgg
     2641 cacctggatc ctcaatggcg actgggacca cacgagctgg ggcggggagc tcccggcgcg
     2701 agcctggatc gactcggtga cgccggacaa cccggtctgg atcaaccgtc tcgacgggca
     2761 catgaacctc gcgaactc
//
LOCUS       DASSYW010000471         2274 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_681899, whole genome shotgun sequence.
ACCESSION   DASSYW010000471 DASSYW010000000
VERSION     DASSYW010000471.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2274)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2274)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2274
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_681899"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..336
                     /locus_tag="VFN38_07535"
     CDS             <1..336
                     /locus_tag="VFN38_07535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HET9011653.1"
                     /translation="GAGLGVIPGRVTLLRAVRVPQIGWNAVEPNPDDALFAAAPLPIA
                     YYANSYVCRPDDPAVVTAWTEHEGDRFPAAVRAGRAVGVQFHPEKSSTQGVRFLRAFL
                     DDARTTETK"
     gene            333..1046
                     /gene="hisA"
                     /locus_tag="VFN38_07540"
     CDS             333..1046
                     /gene="hisA"
                     /locus_tag="VFN38_07540"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003949 -
                     1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HET9011654.1"
                     /translation="MIAIPAVDLRDSACVQLVGGSYKEERIRLDNPVEVARSWAHFGF
                     ARVHVVDLDAATGRGSNLSIVRSILSELDVPVQVGGGIRSGDMVEELLEAGATNVIVG
                     TRALEEMEWLAGIAGAHPGEIIVACDVRERRVTTRGWVRTLPVDILDAVDELNSLPLG
                     GLLVTAVHREGQMQGTDLPLMEDVAEASHFPVYASGGVASMQDLRALEHRGIAGVVIG
                     MALYTGALDPVVVAGEFRE"
     gene            1072..1614
                     /locus_tag="VFN38_07545"
     CDS             1072..1614
                     /locus_tag="VFN38_07545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazoleglycerol-phosphate dehydratase"
                     /protein_id="HET9011655.1"
                     /translation="MTVVVRETKETTIRCEIVRGSGAAVVSTGEPFLDHMMVTFARYS
                     GLDITIQAKGDLAHHLIEDVAICVGAAVAGALPATAARYGDRTIPMDEALVHCALDLG
                     GRPFYRGPIPSSLYEHWMRSFSDNARATLHLRVLRGRDRHHVVEAAFKALGLAVRDAF
                     VDSGAVFSTKGGVALRVEEK"
     gene            1615..>2274
                     /gene="hisF"
                     /locus_tag="VFN38_07550"
     CDS             1615..>2274
                     /gene="hisF"
                     /locus_tag="VFN38_07550"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HET9011656.1"
                     /translation="MLTRRVIVCLDVKGGRVVKGTQFVNLRDVGDPVELASRYEREGA
                     DEIVFLDISASAEERGTLLDVARRTAERLFVPLTIGGGVRSADDVGRALRAGADKVSI
                     NSAAVARPEILMESAARFGAQCVVASIDAKRDDAGWRVYVKGGREATPLDAVAWAAEC
                     VRRGAGEILLTSIDRDGARTGYDIDLTRAVADAVDVPVVASGGAGSAAHVCEVLQRGH
                     AD"
BASE COUNT          335 a          746 c          834 g          359 t
ORIGIN      
        1 ggcgccggcc tcggtgtcat cccggggcgg gtcacgcttc tgcgcgcggt gcgcgtgccc
       61 cagatcggct ggaacgcggt ggagccgaat ccagacgacg cgctgttcgc ggccgcaccg
      121 ctcccgatcg cgtactacgc caacagctac gtctgcagac cggacgaccc tgcggtcgtg
      181 acggcgtgga ccgagcacga aggcgaccgc tttcccgcgg cggttcgagc aggacgcgcg
      241 gtcggcgtgc agtttcatcc ggagaagagc tccacccagg gggtgcggtt cctccgtgcc
      301 ttcctcgacg acgcccgcac gacggagacc aagtgatcgc cattcccgcg gtggacctgc
      361 gcgacagcgc ctgcgtgcag ctcgtgggcg gttcgtacaa ggaggagcgc atccgcctgg
      421 acaatccggt ggaggtcgcg cgctcgtggg cccacttcgg gttcgcccgc gtgcacgtgg
      481 tggatctcga tgcggcgacc gggcgcggct ccaacctttc catcgtgcgg tccatcctga
      541 gcgagctgga tgtgccggtg caggtgggcg gcggcatccg atcgggcgac atggtggagg
      601 agctgctcga ggcgggggcg acgaacgtca tcgtcggcac gcgcgcgctc gaggagatgg
      661 aatggctggc gggcatcgcc ggcgcacacc ccggggagat catcgtcgcc tgcgacgtgc
      721 gcgaacgtcg cgtgacgacg cgcggctggg tgcgcaccct tccggtcgac atcctcgacg
      781 ccgtggacga gctgaactca ctcccgctgg gcggcctgct cgtcaccgcc gtgcatcgcg
      841 aagggcagat gcagggcacc gatcttccgc tgatggaaga cgtggccgag gcatcgcact
      901 ttcccgtcta cgcctcgggc ggcgtggcgt cgatgcagga tctccgcgcc ctcgagcacc
      961 gcggcatcgc cggcgtcgtg atcggcatgg cgctctacac cggggcgctc gatcccgtcg
     1021 tcgtggcggg agagtttcgc gaatgacgtc catcacattt caggagctga catgaccgtc
     1081 gtcgttcgtg aaacgaagga gaccaccatc cgctgcgaga tcgtgcgcgg atcgggcgcg
     1141 gcggtcgtat cgaccggcga gccctttctc gatcacatga tggtcacctt cgcgcgctat
     1201 agtgggctcg acatcaccat ccaggcgaag ggcgacctgg cccatcatct catcgaggac
     1261 gtggcgatct gcgtcggcgc cgcggtggcc ggagcgctcc cggcgacagc agcacgctat
     1321 ggggatcgga cgatcccgat ggacgaggca ctcgtgcact gtgccctcga cctcggcggc
     1381 cgaccgttct accgtgggcc cattccaagc tcgctctacg agcactggat gcgctcgttc
     1441 agcgacaacg cgcgggccac gctacacctt cgcgtcctgc gcggccgcga tcgtcatcac
     1501 gtcgtcgagg cggcgttcaa ggcgctcggc ctcgccgtac gcgatgcgtt cgtggactcg
     1561 ggtgccgtgt tcagcaccaa gggcggtgtc gcgctgcgcg tcgaggagaa atagatgctc
     1621 actcggcgcg tgatcgtctg cctcgacgtg aaaggtgggc gtgtggtgaa ggggacgcag
     1681 ttcgtgaacc tgcgcgacgt cggcgatccg gtggagctcg cgtcacgcta cgagcgcgag
     1741 ggcgcggacg agatcgtgtt cctcgacatc tccgccagcg ccgaggaacg cggcacgctg
     1801 ctcgacgtgg cacgccgcac ggcggagcgg ctgttcgtgc cgctcacgat cggcggtggt
     1861 gtgcgctcgg ccgacgacgt gggacgcgcg ctgcgggccg gcgccgacaa ggtgagcatc
     1921 aactcggcgg cggtggcgcg gccggagatc ctcatggaat cggccgcgcg cttcggcgcg
     1981 cagtgcgtcg tcgcgagcat cgacgcgaag cgcgacgacg cggggtggcg cgtgtacgtg
     2041 aagggcgggc gcgaggcgac accgctcgat gccgtggcgt gggcggcgga gtgcgtgcgg
     2101 cgcggcgccg gggagatcct cctcaccagc atcgaccgcg acggagcgcg cacgggctat
     2161 gacatcgacc tcacccgtgc cgtggccgac gcggtggacg ttcccgtcgt ggcgtcgggt
     2221 ggggcgggaa gcgccgcaca cgtatgcgag gtgctgcagc gtggccacgc cgat
//
LOCUS       DASSYW010000472         2271 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_397086, whole genome shotgun sequence.
ACCESSION   DASSYW010000472 DASSYW010000000
VERSION     DASSYW010000472.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2271)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2271)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2271
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_397086"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..348)
                     /locus_tag="VFN38_07555"
     CDS             complement(<1..348)
                     /locus_tag="VFN38_07555"
                     /inference="COORDINATES: protein motif:HMM:NF024120.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl hydrolase family 28-related protein"
                     /protein_id="HET9011657.1"
                     /translation="MTMISGGRAGIRTAALALGLWATSISAAQPARTAAAQKTFDVTQ
                     YGATGRRGDSATKAIQDAIDACADAGGGVVYVPPGEYTTGAIRLKDNVDLHVQAGATL
                     FLSQDRAEFPAGSR"
     gene            532..1662
                     /locus_tag="VFN38_07560"
     CDS             532..1662
                     /locus_tag="VFN38_07560"
                     /inference="COORDINATES: protein motif:HMM:NF021427.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2130 domain-containing protein"
                     /protein_id="HET9011658.1"
                     /translation="MEQTIACPSCGTKFPLTETLRAEVEGALVREFDERLADERRRAG
                     EEAVRKAEKKLAQDLTCLKEQLQEQATELETARREELALRRRERELEKKAADLEVTVA
                     RTLDAERATLVAEAQRRLLEEHRLKDAEKEHQLADMRKQIEDLKRKAEQGSQQLQGEA
                     GEVELESILRASFPTDDISGIAQGVRGADVHHLVIDTRGCQCGAILWECKNAKNWSDA
                     WVPKLKDDQRAFRADVAVIVTASLPKGCTRFTMIDGIIVTDFACAGALAAVLRGHLLA
                     LARARSAATTKEEKLELLYRYLSGVEFRQRVEAVVEAFTSMRADLDQERRAAERQWAR
                     RAKQIDAVTFNISGMYGDLQALVPVLPPIPLLELPAAEEIEV"
     gene            1676..1987
                     /locus_tag="VFN38_07565"
     CDS             1676..1987
                     /locus_tag="VFN38_07565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011659.1"
                     /translation="MQLITARLCLDCDEVHDQPQCPACASSAYTYITRWIPAPERRAR
                     PRPATSPDAEVYRRLVGESSKPLGKAVRAGVLGVTAVGLFGWLWQTAGRAAEDRKKRK
                     E"
     gene            2010..>2271
                     /locus_tag="VFN38_07570"
     CDS             2010..>2271
                     /locus_tag="VFN38_07570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011660.1"
                     /translation="MTTISHYRLDGEIGRGGMGVVHRAVDTKLGRQVAIKVLPAHATS
                     DPERRRRFIQEARAASALNHPHMESRVKTAVFASAGLRCDVAP"
BASE COUNT          412 a          756 c          776 g          327 t
ORIGIN      
        1 gcgcgatccc gcggggaact ccgcacggtc ctggctcagg aacagcgtgg cgcctgcctg
       61 cacgtgaaga tcgacgttgt ctttcagccg gatcgcgcca gtcgtgtatt cgcccggtgg
      121 aacgtagacg acgccgccac ccgcgtccgc gcaggcatcg atcgcgtcct gaatcgcctt
      181 ggtggcgctg tcgccgcgcc tgccggtggc gccgtactgc gtcacgtcga acgtcttctg
      241 cgccgctgcc gttcgagcgg gttgcgcggc agatatcgag gtcgcccaca agccgagcgc
      301 cagtgccgcc gttctgatgc ccgcgcgacc gccggaaatc atcgtcatgg tgagcggatt
      361 atggcagtgc gcgaagcgct gtcaacgacc ctcccagctc ggcttcctgc ctccccagtg
      421 atcgcgctgc cccagcgaaa caaaaacgta tgaccagccc tgtcacgggt gattcgtacg
      481 ctcgttctcg cgcgggccga tcccagccgg cccggcggaa gcgaggaacc cttggagcag
      541 accatcgcct gtccatcctg cggaacgaag tttccgctga ccgaaacgct gcgtgcggaa
      601 gtcgaaggcg cgctggtgcg cgaattcgac gaaaggctcg ccgacgagcg ccgccgggcc
      661 ggcgaagagg ccgtccggaa agccgagaag aagctcgcgc aggatctgac gtgcctgaaa
      721 gagcagctgc aggaacaggc aaccgagctc gagaccgccc gccgcgagga actggcgctc
      781 cggaggcgcg agcgcgagct cgaaaagaaa gcagcggacc tcgaggtcac cgtcgcgaga
      841 acgctcgacg ccgagcgcgc gacgctcgtc gccgaagcgc agcggcggct gctcgaggag
      901 caccggctga aggacgcgga aaaagagcac cagctcgccg acatgcggaa gcagatcgaa
      961 gatctgaagc ggaaagccga acaggggtcg cagcagctcc agggcgaagc cggcgaggtc
     1021 gagctcgagt cgatcctccg ggcaagcttt ccaaccgacg acatctccgg catcgctcag
     1081 ggggtccgcg gcgcggacgt ccatcacctc gtcatcgaca cgcggggatg ccagtgcggc
     1141 gcgatcctgt gggagtgcaa gaacgcgaag aactggtcgg atgcctgggt cccgaaactg
     1201 aaggacgatc agcgcgcctt tcgcgccgac gtcgcggtca tcgtcacggc gtcgctgccg
     1261 aagggatgca cccgcttcac gatgatcgac ggtatcatcg tcaccgactt cgcgtgcgcc
     1321 ggcgcgctcg ccgcggtgct gcgcggccac ctgctcgcgc tcgcacgcgc gcgcagcgcg
     1381 gcaacgacga aagaggagaa gctcgaactg ctctaccgct acctgtccgg tgtcgagttc
     1441 cgccagcgcg tcgaggcggt cgtcgaggcg ttcacctcga tgcgtgcgga cctcgatcag
     1501 gaacgccgcg ccgccgagcg gcagtgggcg cgccgcgcga agcagatcga cgcggtcacc
     1561 ttcaacatct cgggcatgta cggcgacctg caggcactgg ttccggtgct cccgccgatc
     1621 ccgctgctgg aactgccggc agccgaggaa atcgaggtat aggtaaactg gacggatgca
     1681 gttgattacc gcacgcttgt gcctggactg cgacgaggtc cacgaccagc cgcaatgccc
     1741 ggcgtgcgcc tcgagcgcct acacctatat cacgcgctgg atccccgcgc cggagcggcg
     1801 ggcgcgccct cgaccggcga cctcgccgga cgcggaggtg taccgccgcc tggtcggcga
     1861 gtcgtccaag ccgctgggca aggccgtgag agccggcgtc ctgggcgtca cggccgtcgg
     1921 tctgttcgga tggctctggc agacggcggg ccgcgcggct gaggacagaa agaagaggaa
     1981 ggagtaatcc ccgtataatc acgcgtaccg tgacaaccat ctcgcactat cgtctcgacg
     2041 gtgaaatcgg gcggggcggg atgggggttg ttcaccgcgc ggtggacacg aagctgggtc
     2101 ggcaggtggc catcaaggtc cttcctgccc acgcgaccag cgatcccgaa cgccgccggc
     2161 ggttcatcca ggaagcgcgc gcggcgtcgg cgctgaacca cccgcacatg gagtcccgag
     2221 tcaaaacggc ggtgttcgca tcagccggcc tccgctgcga cgtggcgccg g
//
LOCUS       DASSYW010000473         5540 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1559955, whole genome shotgun sequence.
ACCESSION   DASSYW010000473 DASSYW010000000
VERSION     DASSYW010000473.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 5540)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5540)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5540
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1559955"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(82..870)
                     /locus_tag="VFN38_07575"
     CDS             complement(82..870)
                     /locus_tag="VFN38_07575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011661.1"
                     /translation="MMDNLAEKFERIGARLVVTRAARRRQPQPSRTAAKPFDLDVRRD
                     AKGEHFTLRVFDPAQEFRVLQANAAARHLLLYAPGAGPRDAGERFLCGHDERHWFVAA
                     VKDRVSNITAAKRSLLPDALKDAGLTPDDLARRHTAAFKRQGEWFFVPTDKDLSGKPI
                     LRGEPLLRGRNGKPHVASELVRFGGQMVVLSGGTEYTPEAFEAACAANPELRQRNARR
                     MVKDAEVYVRGPVRHRDHATLVLDGWHRVYVNGEALSENMSFYD"
     gene            complement(1072..1935)
                     /locus_tag="VFN38_07580"
     CDS             complement(1072..1935)
                     /locus_tag="VFN38_07580"
                     /inference="COORDINATES: protein motif:HMM:NF016302.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ERF family protein"
                     /protein_id="HET9011662.1"
                     /translation="MADATTTTERDEAPVTDRVAEALEQAQHFMDRPRADVLPPAEAP
                     KRPEVTLAIADMSAEVGELFAALAEAQGEFTEIERTLTAKIKTRSGPEYSYDYAPLSE
                     VLAAVRPALSKNGLALLQFPMARGGSGASVVVRTMLGHASGQWLRNDLTVGCVSTAPQ
                     DIGSAITYARRYGLQALLGVSPDYDDDGASATGREQTSAPREAPPVPEDAVRIASCAP
                     RNTSGGGKVYSIKTTTGAECFTEDEQLYQAAVAAMRAEQPVRLTTERRTSGQRQYWRL
                     LEIEATDSAKH"
     gene            complement(1969..2157)
                     /locus_tag="VFN38_07585"
     CDS             complement(1969..2157)
                     /locus_tag="VFN38_07585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011663.1"
                     /translation="METTPKVRGPRTLYRPKDTPAVSVSLTRLGKDILRAAAARLSCS
                     MSDVVETLLREHGGRVRG"
     gene            complement(2364..3179)
                     /locus_tag="VFN38_07590"
     CDS             complement(2364..3179)
                     /locus_tag="VFN38_07590"
                     /inference="COORDINATES: protein motif:HMM:NF014430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HET9011664.1"
                     /translation="METLEPIVRLDKDLKAAATTLSVVEARYLVDQYYVLQHDRIRAA
                     HQVRATAEAQEPHQLLQWVQTNTGVLEQNIKRALDAYTDSNIVGRWSKSIVGVGPVIA
                     AGLLAHIDVAQAPTVGHIWRFAGLDPTVTWGKGEKRPWNARLKTLCWKIGESFVKVSG
                     REGDFYGQLYLQRKAIEVERNEAKAFAAQAAASLAGKRYGADTQARKAYEQGMLPPAR
                     IHLRAERWAVKIFLAHWHAVAYRAKFGTDAPKPYVLAILGHADEIQVPNWPWA"
     gene            complement(3696..3872)
                     /locus_tag="VFN38_07595"
     CDS             complement(3696..3872)
                     /locus_tag="VFN38_07595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011665.1"
                     /translation="MIILTAVAGVAGALLWALATRVCRPRRWWHHALIAAVVLPLAVW
                     VAFVVLMVVLFPRP"
     gene            complement(3869..4276)
                     /locus_tag="VFN38_07600"
     CDS             complement(3869..4276)
                     /locus_tag="VFN38_07600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011666.1"
                     /translation="MKEVGMMRAMIGVVRDGIVNFHRRQAAGASRAHRVAALALGAWL
                     VAAPLTNLAAQSAASPSQRDCWGDYTRVLMEAWAEYDKCCYDTAYFNPANPNGSFWNM
                     MMARQGCRINYVMRAESAWFQFLACSAIPEWKP"
     gene            complement(4297..4704)
                     /locus_tag="VFN38_07605"
     CDS             complement(4297..4704)
                     /locus_tag="VFN38_07605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011667.1"
                     /translation="METQKETMMREVKVKKTDLLKVLRKNRAAHRQIFEEALVGYQEK
                     VVAALERSLAQARKGQRVAERFYIQQPQDQTAEYDKAIAMCEMSVDGELTLTSQEFEA
                     YVMDRWQWKDTFLRSNSLYSKMAADAIGGADEA"
     gene            complement(5131..>5540)
                     /locus_tag="VFN38_07610"
     CDS             complement(5131..>5540)
                     /locus_tag="VFN38_07610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011668.1"
                     /translation="GPGEPATPVMGAKGYALAAKSVPAVLPEDAPDPIGVQVLIYEYD
                     TRVRRSDPHGMTIRFEASSAAPIVRLQVGLDDGAPPVVVDFPTPRPPDGRYLRAVAFK
                     PVRNGTWTLTVRAVDEANRTGVATGSVPVVVEP"
BASE COUNT          781 a         2108 c         1648 g         1003 t
ORIGIN      
        1 ctcggataag gtgtcccacg agggggttca tcagcagtgt aggtgataac cctcgcagat
       61 tcgacccgag cgaccgttcc cttagtcgta gaacgacatg ttctccgaca gcgcctcgcc
      121 gttcacgtag acgcggtgcc agccgtccag cacgagcgtc gcgtggtcgc ggtgccgcac
      181 cgggccgcgc acgtagacct cggcgtcctt caccatgcgc cgcgcgttgc gctgccgcag
      241 ctccggattc gccgcgcacg ccgcttcaaa cgcctccggc gtgtactccg tgccgccgct
      301 cagcacgacc atctgcccgc cgaaccggac caactccgac gcgacgtgcg gcttgccgtt
      361 ccgcccgcgc agcagcggct cgccgcgcag gatcggcttg cccgacaagt ccttgtccgt
      421 cggcacgaag aaccactcgc cctgccgctt gaacgccgcc gtgtgccgcc gcgcgaggtc
      481 gtccggcgtc aggccggcgt ccttgagcgc gtccggcagc aggctccgct tcgccgccgt
      541 gatgttcgac acgcggtcct tgaccgcggc gacgaaccag tgccgctcgt cgtgcccgca
      601 caggaaccgc tcgcccgcgt cgcgcgggcc ggcgcccggc gcgtagagca ggaggtgccg
      661 cgcggcggcg ttcgcctgca gcacgcggaa ctcctgcgcc ggatcgaaca cgcgcagcgt
      721 gaagtgctcg cccttcgcgt cgcgccgcac gtcgaggtcg aacggcttcg ccgccgtccg
      781 actcggttgc ggttggcggc gccgcgccgc gcgcgtcacg acgaggcgcg ccccgatgcg
      841 ctcgaacttc tccgcgagat tgtccatcat cgttgccctc gcttcttcaa cggcgcagat
      901 aaggggtggc gacggccatg cctttcggct gccaattgct ctgccaactg agctactcgc
      961 gccgaaacgc gaggcgggac tcgaacccgc gacccactgg ttacaagata accgtcaatc
     1021 cgtcgacccg cgccgccttg cctccgtcaa atgactcgtt ctatcggtcg ttcaatgctt
     1081 ggctgaatcc gtcgcctcga tctccagcag ccgccaatac tgacgctgcc ccgaagtccg
     1141 acgctccgtc gtcagccgca ccggttgctc agcgcgcatc gccgcgacgg ccgcctgata
     1201 cagctgctcg tcctcggtga agcactcggc gccggtcgtg gtcttgatgc tgtagacctt
     1261 gccgccgccg ctcgtgttcc gcggcgcgca cgacgcgatc cgcaccgcgt cctccggcac
     1321 cggcggcgcc tcgcgcggcg ccgacgtctg ctcgcgcccg gtggcggacg cgccgtcgtc
     1381 gtcgtagtcc ggcgacacgc cgagcagcgc ctgcagcccg tagcgccgcg cgtacgtgat
     1441 cgccgagccg atgtcctgcg gcgccgtcga cacgcagccg accgtcaggt cgttccgcag
     1501 ccactggccg ctcgcgtgcc cgagcatcgt ccgcaccacc accgacgcgc ccgacccgcc
     1561 gcgcgccatc gggaactgga gcagcgccag cccgttcttc gacagcgccg gccgcaccgc
     1621 cgccagcacc tcgctgagcg gcgcgtagtc gtaggagtac tccgggccgc tgcgcgtctt
     1681 gatcttcgcc gtcagcgtcc gctcgatctc cgtgaactcc ccctgcgcct cggccagcgc
     1741 cgcgaacagc tcgccgacct ccgccgacat gtccgcgatc gccagcgtca cctccggccg
     1801 cttcggcgcc tcggccggcg gcagcacgtc ggctcgggga cggtccatga agtgctgcgc
     1861 ctgctccagc gcctccgcga cccggtccgt caccggcgcc tcgtcgcgct ccgtcgtcgt
     1921 cgttgcatca gccactgcgc gcctccggtt atacggttaa tggcccggtc agccgcggac
     1981 gcgcccgccg tgctcgcgca gcagcgtctc gacgacgtcg ctcatgctgc acgacagccg
     2041 cgccgccgcc gcccgcagga tgtccttgcc gagccgcgtc agcgacaccg acacggccgg
     2101 cgtgtccttc gggcgataca gggtccgcgg gccgcggacc ttgggtgtgg tctccatagg
     2161 accacctaat ataattaatt tcgccggcgg agtaaacccc gaagttcgcc ccgccggcgc
     2221 gctcggaaac aacggtgccc acgcggttca cggctcgctc ctgtagctcg gcaccctcca
     2281 ccaagtcggc tcgctcgtgt cacccggcgc tctccggggt gaacggctcg ctcacgtaac
     2341 acggtactct cttctggggc ggctcacgcc cacggccagt tcgggacctg gatctcgtcg
     2401 gcgtgcccga ggatcgccag cacgtacggc ttcggcgcgt ccgtgccgaa cttcgcgcgg
     2461 taggcgaccg cgtgccagtg cgcgaggaag atcttcaccg cccaccgctc ggcccggagg
     2521 tggatgcgcg ccggcggcag catgccctgc tcgtacgcct tccgcgcctg cgtgtcggcg
     2581 ccgtagcgct tccccgcgag gctcgccgcc gcctgcgccg cgaacgcctt cgcctcgttg
     2641 cgctcgacct cgatcgcctt gcgctgcagg tacagctgcc cgtagaagtc gccctcgcgc
     2701 ccgctcacct tcacgaacga ctcgccgatc ttccagcaca gcgtcttcag ccgcgcgttc
     2761 cacggccgct tctcgccctt gccccacgtc accgtcgggt cgagcccggc gaaccgccag
     2821 atgtggccga cggtcggcgc ctgcgcgacg tcgatgtgcg cgagcaggcc ggccgcgatg
     2881 accggcccga cgccgacgat cgacttcgac caccgcccga cgatgttgct gtcggtgtag
     2941 gcgtcgagcg cgcgcttgat gttctgctcc agcacgccgg tgttcgtctg cacccactgc
     3001 agcagctggt gcggctcctg cgcctcggcc gtcgcccgca cctggtgcgc ggcgcggatg
     3061 cggtcgtgct gcagaacata atattggtca acgaggtagc gcgcttcgac gacggacagc
     3121 gtcgtcgccg cggctttgag atccttgtcc agccttacga tcggttctag cgtttccata
     3181 ttcgtccctt cctaatcgcc tcaatggtgt gccgagacac accgtattcg ttgccgagat
     3241 caatcgatcg ttccgtaggt cgccgacgaa tctggtccac ttgaagctgc gtcaatttag
     3301 ccatgccgtg tcgttcgccg cgcgccgcca gctccggctg ccgtcgtagc ggatggtcgt
     3361 caccgtagag gtgtccatga cgatgccgcc ccttccgcat cttgtcgctc atgttcgctt
     3421 gagcgtctcc gagaaataga tgcgacaacc gaacgcacgg tggattgtcg catctgtgac
     3481 acacgtattt tcccgtcgga atctcgccgc gcttcgccgt ccacgcgacg cgatgaacag
     3541 ccatcggcat cggcgatatc cgtcgcctcg tgatcagacc atagcctgcc gtcgaccgcg
     3601 cgcctgtcca ttcaaggcat ccatttgctc gtttcttgac gcgttcgaga atcgtagcga
     3661 gcaatccttt ggcttgcgtt cgcgtcatcg ctctcctacg gcctcggaaa cagcaccacc
     3721 atcaggacca cgaacgccac ccacacggcg agcggcagca ccacggccgc gatcagcgcg
     3781 tggtgccacc accgccgcgg ccggcagacc cgcgtcgcga gtgcccacag gagggcgccc
     3841 gcgacgccgg ccaccgccgt caggatgatc acggcttcca ctccgggatc gccgagcagg
     3901 ccaggaactg gaaccacgcc gactcggcgc gcatgacgta gttgatgcgg cagccctgcc
     3961 gcgccatcat catgttccag aacgacccgt tcgggttggc cgggttgaag tacgccgtgt
     4021 cgtagcagca cttgtcgtac tcggcccacg cctccatcag cacgcgcgtg tagtcgcccc
     4081 agcagtccct ctgcgacggc gacgccgccg actgcgccgc gaggttcgtc agcggcgccg
     4141 ccaccagcca cgcgcccagc gccagcgccg cgacgcggtg cgcccgcgac gcgccggcgg
     4201 cctgccgccg gtggaagttc acgatcccgt ccctcacgac tccgatcatc gctcgcatca
     4261 taccgacctc cttcatcgtt gccgctcctc ctcgtgtcac gcctcgtcgg cgccgccgat
     4321 cgcgtccgcc gccatcttgg agtagagcga gttcgaccgc aggaacgtgt ccttccactg
     4381 ccagcggtcc atcacgtacg cctcgaactc ctgcgacgtc agcgtcagct cgccgtcgac
     4441 cgacatctcg cacatcgcga tcgccttgtc gtattcagcg gtttgatcct gcggctgctg
     4501 gatgtagaac cgctccgcca cgcgttgacc cttccgcgcc tgcgccagcg accgttccaa
     4561 cgccgccacc accttctctt gatacccgac cagggcctcc tcgaagatct gccggtgcgc
     4621 cgcgcggttc ttccgcaaca ccttgagcaa atccgttttc ttgaccttca cttcgcgcat
     4681 catcgtctcc ttttgggttt ccatatcgtt gcctgacgcg aaaaattaat taattttctc
     4741 gttgactgta tctgtctttg tgtcggtgtg tcggtcgatc gctcaatcaa tcggtcaatc
     4801 ggtcaatcgg tccatgactc tttcgatgta tcgatcaatc gttgattccg cgctcccata
     4861 tgtcggtgct cgctattttg tcggctcgtt ctgccacctc ggtgccgtct gtcactacga
     4921 ctcgctccct accccggcgc gctctcttgg agacggctcg ctctgcttgc ccggcgccct
     4981 catgggtgac gactcgctct gctactacgg tgctcactcg gcttcggctc gctcaccgtt
     5041 gatggcgcgc agttcccgtt tcggctcact ctatagacac ggtgccctcc cgttactcgg
     5101 ctcgctctgt catatcgtcg ctctcaaacc tcacggctcg accaccaccg gcacgctgcc
     5161 cgtcgcgacc ccggtgcggt tcgcctcgtc gaccgcccgc accgtcagcg tccacgtccc
     5221 gttccgcacc ggcttgaacg ccaccgcccg caggtagcgc ccgtccggcg gccgcggcgt
     5281 cgggaagtcc acgacgaccg gcggcgcgcc gtcgtcgagc ccgacctgaa ggcggacgat
     5341 cggcgccgcg ctcgacgcct cgaaccggat cgtcatcccg tgcgggtccg accgccgcac
     5401 gcgcgtgtcg tactcgtaga tcaggacctg gacgccgatc gggtccggcg cgtcctccgg
     5461 cagcaccgcc ggcacggact tcgccgccag cgcgtagccc ttcgcgccca tgaccggcgt
     5521 cgccggctcg cccggccccg
//
LOCUS       DASSYW010000474         3092 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1518595, whole genome shotgun sequence.
ACCESSION   DASSYW010000474 DASSYW010000000
VERSION     DASSYW010000474.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3092)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3092)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3092
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1518595"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..501
                     /locus_tag="VFN38_07615"
     CDS             <1..501
                     /locus_tag="VFN38_07615"
                     /inference="COORDINATES: protein motif:HMM:NF024110.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HET9011669.1"
                     /translation="LAAGAAAGRPGGAGMAGALADALPSLSLSTLVALLLFFVLGFVF
                     YASLFAAVGAMVNSQEDVQQASMPVMLLLVSSVIFMTPIMTNPGSGLARTMSLLPFSA
                     PILMPLRMTLIPVPWYEVAGSIAGVALACLAAIWMSARIYRVGLLMYGKRPSFAELAR
                     WVRYSN"
     gene            complement(578..1018)
                     /locus_tag="VFN38_07620"
     CDS             complement(578..1018)
                     /locus_tag="VFN38_07620"
                     /inference="COORDINATES: protein motif:HMM:NF023697.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3618 domain-containing protein"
                     /protein_id="HET9011670.1"
                     /translation="MAETPADVRRDIELTRNRISDTLQALEQKMNVAQIVKDNPWPAL
                     ALAVGAGVLLSGSKADVKAAAATVVATKGASSRLGGVLDDIVAQVVAGFHGAIEQKIE
                     GLAGDVRKAIGAPATRGGVPAQRSAVSSFGSTPDLTSSTIPRAD"
     gene            complement(976..1407)
                     /locus_tag="VFN38_07625"
     CDS             complement(976..1407)
                     /locus_tag="VFN38_07625"
                     /inference="COORDINATES: protein motif:HMM:NF018980.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HET9011671.1"
                     /translation="MAVDHGADGRRGLGALLRDLAEGSAELVRGEVRLARLELGTAAS
                     AAGRGTGFVAVGGVLLLLGTLATFTGLVLLIGDQWLPRDLYWVAALLFALICGVVAAW
                     FANRGRTMLSPAALAPHETVATLKEDKEWLKHPLTSGATSS"
     gene            complement(1417..2040)
                     /locus_tag="VFN38_07630"
     CDS             complement(1417..2040)
                     /locus_tag="VFN38_07630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011672.1"
                     /translation="MERNANDTFGSGTSGESTSGGFGGSTGSAGSANSPSSFGASGAG
                     SMGTAGGAGSMGSTGTSDASFSRDSATDASGFADRAKSAAGTAQEKLADVGSSVRDRA
                     GNLKNTLADALESGAEKLRAQGAGGGQIAGASATGGSMGMVGEGSRVSEATNQLAGGL
                     QASADWLRDADLDGLKSGVERQVKEHPGRTLAVAVGLGYLLGKAFRK"
     gene            complement(2236..2655)
                     /locus_tag="VFN38_07635"
     CDS             complement(2236..2655)
                     /locus_tag="VFN38_07635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrxA/BrxB family bacilliredoxin"
                     /protein_id="HET9011673.1"
                     /translation="MMYDERFVTPMRQELTRLGVEEMRTASDVDAKLKDAPGTTLVVV
                     NSVCGCAARNARPAVAAALRHEVKPDHLTTVFAGQDTDAVTRARSYFTGYPPSSPQIG
                     LLKDGQIVFMLERHQIEGRTADDIAKDLVGAFDKYCG"
     gene            complement(2714..>3092)
                     /locus_tag="VFN38_07640"
     CDS             complement(2714..>3092)
                     /locus_tag="VFN38_07640"
                     /inference="COORDINATES: protein motif:HMM:NF012393.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="co-chaperone GroES family protein"
                     /protein_id="HET9011674.1"
                     /translation="GIHSRRMIRNDKELIVVGDRVVVKVEEGEERTSVGLYLPSTAME
                     GQAVQGGTIMATGPGQPMPSFDAASGEEPWKEPVREMRFVPMQARRGDYALFFRKAAV
                     EITFEGERFLVVPQAAILALVRE"
BASE COUNT          393 a         1113 c         1074 g          512 t
ORIGIN      
        1 ctcgcggcgg gcgccgcggc gggacggccg ggcggggcgg ggatggccgg cgcgctcgcc
       61 gacgcgctcc cttcgctctc gctgtccacc ctcgtcgcgc tgctcctgtt cttcgtgctc
      121 ggcttcgtgt tctacgcgtc cctgttcgcc gcggttggcg cgatggtgaa cagccaggag
      181 gacgtgcagc aggcgtcgat gccggtgatg ctgctgctcg tctcgtcggt gatcttcatg
      241 acgccgatca tgacgaaccc gggcagtggc ctggcgcgca cgatgtcgct cctgcccttc
      301 tcggcgccca tcctgatgcc gctgcggatg acgctgatcc ccgttccctg gtacgaggtg
      361 gcgggttcca tcgccggcgt ggcgctggcc tgcctggcgg ccatctggat gtcggcgcgg
      421 atctaccgcg tggggctgct gatgtacggc aagcggccga gcttcgccga gctggcgcgc
      481 tgggtgcgct actccaactg acggtcggcg taaagacggg gcccgccgcg actgcggcgg
      541 gccccgtgtg cgtcccggca gcgaagcgac cggctcgtca gtccgcccgc gggatcgtcg
      601 atgaggtcag gtccggagtc gagccgaacg acgacacggc ggaccgctgc gccggcacgc
      661 cgccgcgcgt cgccggtgcc ccgatcgcct tcctcacgtc gcccgcgagc ccttcgatct
      721 tctgctcgat cgcgccatgg aagcccgcga ccacctgcgc gacgatgtcg tcgagcacgc
      781 cgcccaggcg gctgctcgcc cccttcgtgg cgacgaccgt cgcggcggcc gccttcacgt
      841 cggccttcga accgctgagc agcacgccgg ccccgacggc gagcgcgagc gccggccacg
      901 ggttgtcctt cacgatctgc gcgacgttca tcttctgctc cagcgcctgc agcgtgtccg
      961 agatccggtt gcgcgtcagc tcgatgtcgc gccggacgtc agcgggtgtt tcagccattc
     1021 cttgtcctcc ttgagggtcg cgaccgtctc atgcggcgcg agcgcggccg gcgagagcat
     1081 ggtgcgtccc cggtttgcga accaggcggc gacgacgccg cagatgaggg cgaacaggag
     1141 cgccgcgacc cagtagaggt cgcgcggcag ccactggtcg ccgatgagca gcacgaggcc
     1201 ggtgaaggtg gccagcgttc cgagcaggag cagcacgccg ccgacggcga cgaaccccgt
     1261 tccgcgcccc gcggccgagg cggccgtgcc gagctcgaga cgggcgaggc gaacctcgcc
     1321 ccgtacgagc tcggcgctcc cctccgcgag atcgcggagg agggcgccca ggccccggcg
     1381 gccgtcggca ccatgatcga ccgccatggg atcctcctac ttgcggaagg ccttgccgag
     1441 caggtagccg aggccgacgg ccacggccag cgtacggccc gggtgctcct tgacctggcg
     1501 ctcgacgccc gacttgaggc catcgaggtc ggcgtcgcgc agccagtcgg ccgaggcctg
     1561 gaggccgccg gcgagctgat tcgtcgcctc gctcacgcgg ctcccttcgc cgaccatgcc
     1621 catgctgccg cccgtggcgg aggcgccggc gatctgtccg ccgcccgcgc cctgcgcgcg
     1681 cagcttctcg gcgcccgact ccagcgcgtc ggccagggtg ttcttcaggt tgcccgcgcg
     1741 atcgcggact gaggagccga cgtccgccag cttctcctgc gcggtgcccg cggcgctctt
     1801 cgcgcggtcg gcgaagccgc tcgcgtcggt ggcgctgtca cgcgagaagc tcgcgtcgga
     1861 ggtgccggtg ctgcccatgc tgcctgcgcc gcccgcggtg cccatgctgc ctgcaccgct
     1921 ggcgccgaag ctcgagggcg agttggcgct gccggccgag ccggtgcttc cgccgaatcc
     1981 gccggaggtc gactcgccgc tggtgccgct gccgaaagtg tcgttcgcgt tgcgttccat
     2041 atccatctcc gccgtgtggg tccaggtgct gaggactgac accgagtgca gagtgtgtgc
     2101 cgttgaagac ggtaaggcgg tagggcggtt gggcggtgag gcggtggggc ggcaacgacg
     2161 aagggcacac cgaaccagcg ccggtgtgcc cttcctgccg ccttgccgcc ttaccgcctc
     2221 acggcctacc cgtcttcacc cgcagtactt gtcgaacgcg cccaccaggt ccttcgcgat
     2281 gtcgtccgcc gttcgcccct cgatctgatg gcgctcgagc atgaagacga tctggccgtc
     2341 cttgaggagg ccgatctgcg gggagctggg tggatacccg gtgaagtagc tccgcgcgcg
     2401 cgtcaccgcg tccgtgtcct gtccggcgaa cacggtggtg aggtggtcgg gcttcacctc
     2461 gtgccggagc gccgccgcca ccgccggccg ggcgttgcgc gccgcgcagc cacagacgga
     2521 gttcaccacc acgagggtcg tccccggggc gtccttgagc ttcgcgtcca cgtcggacgc
     2581 cgtgcgcatc tcctcgactc cgagccgggt gagctcctga cgcatcgggg tgacgaaccg
     2641 ttcatcgtac atcatgtagc cctctgagat atctgcggta tggatgattc ccgacgccgt
     2701 gggtcggcgt ggcctactcg cgcaccagcg cgaggatcgc cgcctggggc acgacgagga
     2761 agcgctcgcc ctcgaacgtg atctcgacgg cggccttgcg gaagaagagc gcgtagtcgc
     2821 cgcgccgtgc ctgcatcggg acgaagcgca tctcgcgtac cggctccttc cacggctcct
     2881 ccccggatgc cgcgtcgaag ctcggcatcg gctgcccggg ccctgtcgcc atgatggtgc
     2941 caccctgcac ggcctgccct tccatggccg tggagggcag ataaagcccc accgaggtgc
     3001 gctcctcgcc ctcttcgacc ttcacgacga cgcggtcgcc gacgacgatc agttccttgt
     3061 catttcggat catacgtctg gaatgtatcc ct
//
LOCUS       DASSYW010000475         2371 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_663026, whole genome shotgun sequence.
ACCESSION   DASSYW010000475 DASSYW010000000
VERSION     DASSYW010000475.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2371)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2371)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2371
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_663026"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..724)
                     /locus_tag="VFN38_07645"
     CDS             complement(<1..724)
                     /locus_tag="VFN38_07645"
                     /inference="COORDINATES: protein motif:HMM:NF013720.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011675.1"
                     /translation="MRDYQQIIEGAAIGEVGPTVQLAVAGNDRAAFLQGLLTNDVQAL
                     KPGGGCYAAWLTPQGRMLTDMHVLESDGMMLLDVPAAQAEATAARLEQFLFSEDVKLG
                     SLAGALTTVWVHGPQAAAALERSLDGASGLAAWAQYHHEHVGFAGESLVLARIDQLAV
                     PGFCAYLSATNRDALITALEAAGAWQVAPEAIAAARVEAGYPIFGSDMTADTIPLEAG
                     IEPRAISTSKGCYVGQEVIIRVL"
     gene            799..>2371
                     /locus_tag="VFN38_07650"
     CDS             799..>2371
                     /locus_tag="VFN38_07650"
                     /inference="COORDINATES: protein motif:HMM:NF014215.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HET9011676.1"
                     /translation="MFLRHCTWAFLLLLATGAQAQEAAPPSRGYTIFLRGAPIGREDV
                     TVRSDGSGLSIVSQGRMSVPSSITTRRAEVRYATDGTPQSFGLDATVNGGDVTATSTF
                     AGNVARTNGTQTGGPYSREHTISPQSVVLLPNSFFGAFEAVSRRLVNAPKDTELRAYI
                     LPQGETTVKLLSSAPERVQVGTDVFDVVHFDALWQIPGQTNLGLSITAMKDGSLVRFS
                     VPSQGLDVVRADVAASTSRSQVFSNPGDEAVTIPAVGFNIGATVTRPTSAAAGPRLPA
                     VILLTGAGINDRDGQSHGVPTNGQLAGAIAKAGYLVVRYDKRGYGQSGGRSESSTLAD
                     QAEDVRAVVRWLNDRKDVDPKRVAVVGHSEGAWVAMLAAGKERKLAAVVSLAGAGSTG
                     AELILTQQQKALEQSALSPQDRESRVAMQKQIHSAVISGKGWEGVPPQLRKEADTPWM
                     QSVLLFDPAKALEDVRQPILFVHGGLDHEVEPANAERLVEIARKESRSKSVELVVVRG
                     VNHLLTPAVTGEVKEY"
BASE COUNT          386 a          826 c          813 g          346 t
ORIGIN      
        1 gcagcacgcg gatgatcact tcctgcccca cgtagcagcc cttgctggtc gagatcgcgc
       61 gcggctcgat acccgcttcg agcggaatag tgtccgccgt catgtcgctg ccgaagatcg
      121 gatacccggc ctcgacgcgc gcggccgcga tggcctcggg cgccacctgc cacgcgcccg
      181 ccgcttcgag cgcggtgatg agcgcgtctc gattggtggc gctgaggtag gcgcagaagc
      241 cgggaacggc aagctgatcg atgcgcgcca gcaccagcga ctcgcccgcg aagccgacgt
      301 gctcgtggtg atactgcgcc caggccgcga gcccgctggc gccgtcgagc gagcgctcga
      361 gcgcggcggc cgcttgcggg ccgtgcaccc acaccgtggt cagggcgccg gcgagcgacc
      421 cgagcttcac gtcttcggag aacaggaact gctccaaccg ggcggctgtg gcctcggcct
      481 gcgccgccgg cacgtcgagc agcatcatgc cgtccgactc gaggacgtgc atgtcggtga
      541 gcatccggcc ttgtggtgtc agccacgccg catagcagcc gccgccaggc ttgagcgcct
      601 ggacgtcgtt ggtcagaagc ccttgaagaa aggccgcccg gtcgttgccg gccaccgcca
      661 actggaccgt gggtccaact tcgccaatcg ccgcgccttc aatgatttgc tggtaatccc
      721 gcaccctgcc taccctgccc actccgccta ctcagccacc cccgcgtcaa tgcgaaccgt
      781 ttgatacgat cggttcgcat gttcttacgg cattgtacct gggcgttttt gctgctgctc
      841 gctacggggg cccaggcaca ggaggcggcg ccgccgtccc ggggctacac catctttctg
      901 cggggcgccc cgattggccg cgaggacgtg acggtccggt cggacgggtc tggcctgtcg
      961 atcgtcagcc aggggcggat gtcggtcccc tccagcatca cgacgcggcg ggccgaagtg
     1021 cggtatgcca ccgacgggac gccgcagtcg ttcggcctcg acgccaccgt gaacggcggc
     1081 gacgtgacgg ccacctcgac cttcgcgggc aacgtggccc gcaccaacgg cacccagacc
     1141 ggcggaccct attcgcgcga gcacaccatc tcgccgcagt cggtcgtgct gctcccgaac
     1201 tcgttcttcg gcgccttcga agcggtgagc cggcgcctgg tgaacgcgcc caaagacacc
     1261 gagctccgcg cctacatcct gccgcagggc gagaccacgg tgaagctgct ctccagcgcg
     1321 cccgaacgcg tccaggtcgg caccgacgtc ttcgacgtcg tccacttcga cgcgctgtgg
     1381 cagatccccg gacaaacgaa cctcgggctc agcatcacgg cgatgaagga cggcagcctc
     1441 gtccgcttca gcgtgccgtc gcaggggctc gacgtggtgc gcgcggacgt ggccgcttcc
     1501 acgtcgcgat cgcaggtgtt ctccaacccg ggcgacgaag ccgtcacgat tccggccgtc
     1561 gggttcaaca tcggcgccac cgtgacgcgg ccgacaagcg ccgcagcggg ccccagatta
     1621 cccgccgtga tcctgctcac cggggccggc atcaacgatc gtgacgggca gtcgcacggc
     1681 gtgcccacca acggccagct cgcaggggcc atcgccaaag ccggctacct cgtggtgcgc
     1741 tacgacaagc gcggctacgg acagagcggc gggcgctccg agtcgtccac gctcgccgat
     1801 caggccgagg acgtgcgcgc ggtggtccgc tggctgaacg accgcaagga cgtggacccg
     1861 aagcgcgttg ccgtagtggg ccacagcgaa ggcgcgtggg tggccatgct ggcggccggg
     1921 aaggagcgca agctggcggc cgtggtgtcg ctcgcgggcg cgggcagcac cggcgccgag
     1981 ctcatactga ctcagcagca gaaggcactc gagcagtccg cgctgtcgcc gcaggaccgt
     2041 gagtcgcgcg tggcgatgca gaagcagatc cactccgcgg tgatctcggg caagggctgg
     2101 gaaggcgtgc cgccgcagct gcgcaaggaa gccgacacgc cgtggatgca gagcgtgctg
     2161 ctcttcgacc cggcaaaggc gctcgaggac gtgcggcagc cgatcctgtt cgtgcacggc
     2221 ggactcgatc acgaggtgga gccggccaac gccgaacgac tggtggagat cgcgcgcaag
     2281 gagagcagaa gcaagtcggt ggagctggtc gtggtgcgcg gcgtgaacca tctgctgacg
     2341 cccgccgtca ccggcgaagt caaggaatac g
//
LOCUS       DASSYW010000476         3986 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_652557, whole genome shotgun sequence.
ACCESSION   DASSYW010000476 DASSYW010000000
VERSION     DASSYW010000476.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3986)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3986)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3986
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_652557"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(6..818)
                     /locus_tag="VFN38_07655"
     CDS             complement(6..818)
                     /locus_tag="VFN38_07655"
                     /inference="COORDINATES: protein motif:HMM:NF013718.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HET9011677.1"
                     /translation="MRSIGIAAVLFALTTQVAGAQVTDTTGRDKTFLTRRDLLTSGIA
                     LGATALLSRYDDDIALAARQTRFQSPSMTKFALNVSKVNETTLTLGGILVYGIGRLTK
                     QQTVTDIALHATESVVLASVASQIIRGPLGRSRPYVTNDTNQYDFSFFGGFRRGEDGF
                     RHRSFPSIHTSSGMAVATVLTMELHRRHAGATPFVAPVLFAAGMLPGLVRIQLDQHWA
                     SDVFAGAFMGVFAGYKVVSYSHSHPDNRFDRTLLKFSVVPTANGPAVTFSPF"
     gene            1013..1387
                     /locus_tag="VFN38_07660"
     CDS             1013..1387
                     /locus_tag="VFN38_07660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011678.1"
                     /translation="MGYRVFRDSKGVEWQTWDVVPQLAERRAAERRRAERAAPPESVA
                     AERRRMRERRVTAGRRPLLSAGLDGGWLCFEAPVEKRRLTPIPADWLRCDDECLERYC
                     RQAKPARTSIAIDISTLGDLRN"
     gene            1425..2579
                     /locus_tag="VFN38_07665"
     CDS             1425..2579
                     /locus_tag="VFN38_07665"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HET9011679.1"
                     /translation="MLLILALAQGAALVLLLHRLLPGRRRRPPVAPGGVVPEGTTVSV
                     VVATLNEARRIQPCLDGLVAQGALVREILVVDSGSADGTADLVRAAARRDPRIRLLRD
                     EPLPAGWVGKVWALEHGLVHARGEWVLGIDADTAPHPDLAAGAVRAAIANRYDAVSFA
                     PRFRIESAGERWLQPALLVTLVYRFGAAGADADPERVMANGQCFLARRDVLLAAGGYR
                     SARASFCDDVTLARHLARAGRRVGFLDGSRLYDVRSYTSAREVWREWGRSLDLKDAST
                     AWRQWADVIFLVLVQGVPLPALLALALLASSGQPLGDGARLVGLLSSVTLGVRLLLQR
                     ALAPSYARTGVAFWLSPLSDPLAALRILLSTLRTPTQWRGRSYAPFLSAR"
     gene            2576..3436
                     /gene="hemQ"
                     /locus_tag="VFN38_07670"
     CDS             2576..3436
                     /gene="hemQ"
                     /locus_tag="VFN38_07670"
                     /EC_number="1.3.98.5"
                     /inference="COORDINATES: protein motif:HMM:NF008913.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_process: GO:0006785 - heme B biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogen peroxide-dependent heme synthase"
                     /protein_id="HET9011680.1"
                     /translation="MTDPTDPRADRPRAHPPETTEGWYALHQVFAWNRTALRTIPDAA
                     LSTQKAQAERTLASLAAPSGGGWSAVVPLIGNRSDVMLVHFRPTLDELGAAQRDLAAL
                     PLFDVLVPTYTFLSVTEAGLYHASAQLAAAATARGGTVGDETYRAEMEKRVAGERANA
                     HVQRRLFPVQPPEMPYVCFYPMSKRRVPGQNWYALTLEERSRLMMAHGMTGRGYAGRV
                     VQVISGAIGFDAWEWGVTLFAGDPLSFKKIVTDMRFDEVSAEYAEFGDFYVGKTTSAA
                     EWLGLVIPHE"
     gene            complement(3545..>3986)
                     /locus_tag="VFN38_07675"
     CDS             complement(3545..>3986)
                     /locus_tag="VFN38_07675"
                     /inference="COORDINATES: protein motif:HMM:NF045040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011681.1"
                     /translation="GSFVAGRAKRTVSKPSFTQVHAELKDEAESVAEIINDLALAVEA
                     ILVKHGKAVIEQQFHQLRLANAAIDIYMAVATLSRTTWEIERAGSVEAAAAELDCARV
                     FIPAAMRRARRNIRALKANQDARLKAIAERALDTADLAPRSPTD"
BASE COUNT          556 a         1417 c         1391 g          622 t
ORIGIN      
        1 accgatcaaa aaggcgaaaa ggtcaccgcc ggtccgttcg ccgtgggcac gacggagaac
       61 ttgagcagcg tgcgatcgaa gcggttgtcc ggatgcgagt ggctgtacga caccaccttg
      121 tagccggcga acacccccat gaacgcgccg gcgaacacgt cgctcgccca gtgctggtcg
      181 agctggatgc gcacgaggcc gggcagcatg cccgccgcga acagtaccgg cgccacgaac
      241 ggcgtcgcgc cggcatggcg gcgatgaagc tccatcgtca gcaccgtggc gaccgccatc
      301 cccgacgacg tgtgaatcga ggggaacgag cgatgccgga atccgtcctc gccgcgccgg
      361 aagccgccga agaaggaaaa gtcgtactgg ttcgtgtcgt tcgtgacgta tggacgcgaa
      421 cggccgaggg gtccgcggat gatctggctc gccacgctcg cgagcaccac cgattccgtc
      481 gcgtgcagcg cgatgtccgt cacggtctgc tgcttcgtga gccgcccgat gccgtagacg
      541 aggatgccgc cgagcgtgag cgtcgtctcg ttcaccttgc tcacgttgag cgcgaacttc
      601 gtcatgctcg ggctctggaa gcgcgtctgg cgcgcggcga gcgcgatgtc gtcgtcgtag
      661 cgcgagagca gcgccgtcgc gcccagcgcg atgcccgacg tgagcaggtc gcggcgggtc
      721 aggaaggtct tgtcgcggcc ggtggtgtcg gtgacttgcg cgcccgcaac ctgggtcgtg
      781 agcgcgaaca ggacggcggc gatgccgatg gaacgcaaac agtggctcct gtgtggggag
      841 agggtggtcg gtggcgccca tgcaccggcc gtgccgccca aatttccgtc attttcccgt
      901 cagcttttat cacatattgg caccatccct gccttatgaa cgtgtggcag gcaggacgta
      961 gcgggcgcga ccacacgcgc gagcggcgtc tgccgagatg gggaggacag acatgggcta
     1021 tcgtgtcttc agggattcga agggcgtcga gtggcagacg tgggatgtcg tcccgcagct
     1081 ggccgagcgg cgcgcggccg agcgccgacg agcggagcgc gccgcacccc ccgagtcggt
     1141 cgccgctgaa cggcgccgga tgcgcgagcg tcgcgtgacg gccgggcgac gtccgctcct
     1201 gagcgcgggg ctcgacggcg ggtggctctg cttcgaggcg ccggtcgaga agcgccgcct
     1261 cactcccatc ccggcggact ggctccgctg cgacgacgag tgcctcgagc gctactgccg
     1321 ccaggccaag ccggcacgca cgtcgatcgc catcgacatc tctaccctgg gcgacctgcg
     1381 caactagcgc ctccgtccgt cgccgcgccc gcctaccttt aggcgtgctc ctgatcctcg
     1441 cgctggcgca gggcgccgcg ctcgtactgc tgctgcaccg cctgctcccc ggccgccgac
     1501 gccggccacc ggtcgcaccc ggcggcgtcg tgccggaggg cacgacggtg agcgtcgtcg
     1561 tggcgaccct gaacgaggcg cgccgcattc aaccctgcct cgacggcctc gtcgcccagg
     1621 gcgcgctcgt gcgcgagatt ctcgtcgtcg acagcggcag cgccgacggc accgccgatc
     1681 tcgtgcgcgc ggccgcacgg cgtgatcccc gcatccgcct gctgcgcgac gagcccctgc
     1741 cggccggctg ggtggggaag gtctgggccc tcgagcacgg cctcgtgcac gcacgaggcg
     1801 agtgggtgct cggcatcgac gccgacacgg ccccgcatcc ggacctcgcc gccggcgccg
     1861 tgcgcgcggc gatcgccaac cgctacgacg ccgtctcgtt cgcgccgcgc ttccgcatcg
     1921 agtccgcggg cgagcgctgg ctccagccgg cgctgctcgt cacgctcgtc taccgcttcg
     1981 gtgccgcggg ggcggacgcg gatccggagc gcgtgatggc caacggccag tgcttcctcg
     2041 cgcgccgcga cgtgctgctc gccgccggcg gctatcgctc ggcgcgcgcc tccttctgcg
     2101 acgacgtgac cctcgctcgc catcttgcgc gcgccggccg gcgcgtcgga ttcctcgacg
     2161 gctcgcggct ctacgacgtg cgctcgtaca cctcggcgcg cgaggtctgg cgcgagtggg
     2221 ggcgctcgct cgatctcaag gatgcatcga ccgcgtggcg gcagtgggcc gacgtgatct
     2281 tcctcgtgct cgtgcaggga gtgccgctgc cggcgctcct cgccctcgcg ttgctggcgt
     2341 cgtccggtca gcccctcggc gacggcgcac ggctcgtcgg actgctctcg agcgtgacgc
     2401 tcggcgtgcg gctcctgctc cagcgcgccc tcgcgccgtc gtacgcgcgc accggcgtgg
     2461 ccttctggct gtcaccgttg tccgatccgc tcgcggcgct ccgcatcctc ctcagcacgc
     2521 tgcgcacgcc gacgcagtgg cgcggccgca gctacgctcc atttctttcc gcccgatgac
     2581 cgacccgacc gatcctcgcg ccgaccgtcc gcgcgcgcat ccccccgaaa ccaccgaagg
     2641 gtggtacgcg ctgcaccagg tgttcgcctg gaaccggacc gcgctgcgca ccatccctga
     2701 cgccgcgctc tcgacacaga aggcacaagc ggagcggaca ctcgcgtcgc tggccgcacc
     2761 gagtggcggg ggatggtcgg cagtggtgcc gctgatcggc aaccgatccg acgtgatgct
     2821 cgtgcacttc cgccccaccc tcgacgagct cggcgccgcg cagcgcgacc tcgccgcgct
     2881 gccgctcttc gacgtgctcg tgcccacgta caccttcctg agcgtgacgg aggcggggct
     2941 ctaccacgcc agcgcgcaac tcgcggcggc agcgacggcg cgcggcggca ccgtgggcga
     3001 cgagacctac agggccgaga tggagaagcg cgtcgccggg gaacgggcga acgcccacgt
     3061 gcagcgccgg ctctttccgg tgcagccgcc cgagatgccg tacgtctgct tctacccgat
     3121 gtccaagcgc cgcgtgccgg ggcagaactg gtatgccctc accctggaag agcggagccg
     3181 cctgatgatg gcgcacggca tgaccggccg cggctacgcg gggcgggtgg tgcaggtgat
     3241 cagcggcgcg atcggcttcg acgcgtggga gtggggggtg actctcttcg ccggcgatcc
     3301 gctgtcgttc aagaagatcg tcaccgacat gcggttcgac gaggtcagcg cggagtatgc
     3361 ggagttcggg gacttctacg ttgggaagac gacatccgcg gctgagtggc tcggtcttgt
     3421 catcccgcac gagtgagcgt agcgagcaag tgtcgggatc tactcgcctc tcgtcgaacc
     3481 cggcttcggc gtagggaagg tagagcctga cactcgctgc gctcgtgcgg gatgacagcg
     3541 accgtcagtc cgtcggcgac ctcggggcca ggtccgcggt gtccagcgcc cgctcggcga
     3601 tcgccttgag ccgcgcatcc tggttcgcct tcagcgcccg gatgttgcgc cgcgcgcggc
     3661 gcatcgcggc gggaatgaac acccgcgcgc aatccagctc cgcggcagcg gcctccaccg
     3721 accccgcgcg ctcgatctcc cacgtcgtcc gtgagagcgt ggcgaccgcc atgtagatgt
     3781 cgatcgcggc gttggcgagg cggagctggt ggaactgctg ctcgatcacc gccttgccgt
     3841 gcttgaccag aatcgcctct accgcgaggg cgagatcgtt gatgatttcg gccaccgact
     3901 cggcctcgtc cttcagctcg gcatgcacct gggtgaacga cggcttgctc accgtgcgct
     3961 tggcgcgccc ggcgacgaac gacccg
//
LOCUS       DASSYW010000477         2040 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_316139, whole genome shotgun sequence.
ACCESSION   DASSYW010000477 DASSYW010000000
VERSION     DASSYW010000477.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2040)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2040)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2040
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_316139"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..409)
                     /locus_tag="VFN38_07680"
     CDS             complement(<1..409)
                     /locus_tag="VFN38_07680"
                     /inference="COORDINATES: protein motif:HMM:NF026042.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HET9011682.1"
                     /translation="MPPVRTMRPVYVDRLPPCNHACPAGENIQAWLAEAQAGRYRQAW
                     ETLVRDNPMPAVHGRVCYHPCEDACNRKDVDEAVSVHAVERFLGDLAQANGWTLQPDQ
                     PPSGRRVLVVGAGPSGLSAAWHLARRGHEVVIYE"
     gene            655..1488
                     /locus_tag="VFN38_07685"
     CDS             655..1488
                     /locus_tag="VFN38_07685"
                     /inference="COORDINATES: protein motif:HMM:NF015682.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011683.1"
                     /translation="MSARRLIRDAIVGAVLLTAPAAAQQPAEKTIPDKVQLFIPYKDY
                     SAEDNARVLEAYKYLRVADVSDGMDVVGLQNVGLVTPEIHALWKDTERFTHRVAGIAV
                     TARYVPTNRREPRMDDKTISTWYSTITSEAFMKVLTPGSILVIDAMEDGESRSIGSSN
                     IMSWKKLGMVGLVTSGGLADTDEIINEKVPVYFRRLARGIRPGRNELESVNRPVTIGG
                     VLVRPGDVVVADGDGVVVVPRERAMDVAEAALPFLDNIGRERYIRETGKNPWAKKPPG
                     K"
     gene            complement(1543..>2040)
                     /locus_tag="VFN38_07690"
     CDS             complement(1543..>2040)
                     /locus_tag="VFN38_07690"
                     /inference="COORDINATES: protein motif:HMM:NF024122.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IB family phosphatase"
                     /protein_id="HET9011684.1"
                     /translation="ISARTSRPIVARLAFAGRSAADLRARGRQYARDILPGVVRPLAL
                     ERIDWHKRQGDTVVVVSASLGAYVTPWCESVGVTAICTELDERHGVLTGRYAGGECSG
                     PAKVRRIRERYDLDRYPVIYAYGDTDEDREMLGLAHEKYYRWQKLGDGAMLSSRHPAS
                     ARVRP"
BASE COUNT          339 a          667 c          730 g          304 t
ORIGIN      
        1 cctcgtagat cacgacctcg tgtccgcgac gtgcgaggtg ccaggccgcc gagagtccgc
       61 tcggacccgc gcccaccacg agcacccgcc gaccggaagg aggctgatcg ggctgaaggg
      121 tccacccgtt ggcctgcgcc agatcaccca ggaagcgttc gacggcgtgg acgctgacgg
      181 cctcgtccac gtctttccgg ttacaggcgt cctcgcaggg gtgatagcag acccggccgt
      241 gcaccgccgg catcggattg tcgcggacga gcgtctccca cgcctggcgg tagcgcccgg
      301 cctgtgcctc ggcgagccag gcctggatgt tctcccccgc cgggcacgcg tggttgcacg
      361 gcggcaggcg atcgacgtag accgggcgca tcgtacgcac tggcggcatg ggcgggttgt
      421 ccttcgggcg gggaagagca actggcgagc cagcgatcga tcgcgagatg ccgccgtcag
      481 tcgggcaatt tcacgacggc cgtgcgggga tggcgcggaa aagtccgcga tggtgtgaaa
      541 gaacccgcgg tcgtcgccga cgctatggcg acgctatgat gtcgccagcc gttgaaggcc
      601 gcgtcgcggt cgcacgaacg tcagccgtta ccgcggcctc gtgcaggagg gcctatgagc
      661 gcgcgaaggc tgatccggga tgcgattgtc ggcgctgtgc tgttgacggc gccggcggcg
      721 gcgcagcagc cggcggagaa gacgatcccc gacaaggtcc agctcttcat cccctacaag
      781 gactactcgg ccgaggacaa cgcgcgggtc ctcgaggcct acaagtacct tcgcgtcgcc
      841 gacgtctccg acggcatgga cgtggtcggc ctgcagaacg tcggtctcgt cactcccgag
      901 atccacgcgc tctggaagga caccgagcgg ttcacgcacc gtgtcgccgg catcgcggtg
      961 acggcgcggt acgtgccgac gaaccgccgc gagccgcgca tggacgacaa gacgatcagc
     1021 acctggtaca gcacgatcac gtcggaggcg ttcatgaagg tgctgacgcc gggctcgatc
     1081 ctggtgatcg atgcgatgga ggacggcgaa tcgcggagca tcggctcgtc gaacatcatg
     1141 agctggaaga agctcgggat ggttggactg gtgacgagcg gcgggctcgc ggacaccgac
     1201 gagatcatca acgagaaggt gccggtctat ttccgccgtc tcgcacgcgg catccggccg
     1261 gggcgcaacg agctggagtc ggtgaaccgg cccgtgacga tcggcggcgt gctcgtccga
     1321 ccgggtgacg tggtcgttgc cgacggtgat ggcgttgtcg tcgtgccgcg cgagcgggcg
     1381 atggacgtgg ccgaggcggc gctgccgttc ctcgacaaca tcggccgcga gcgttacatc
     1441 agagagacgg gaaagaatcc gtgggcgaag aagccgcccg ggaaatagcg gcgatctcgt
     1501 gccccgcctg ccggcgccgg gcgcggcaga tgcattcacg attcacggcc tgacccgcgc
     1561 cgacgcggga tgcctggacg agagcatcgc gccgtcgccg agcttctgcc agcggtagta
     1621 cttctcgtgc gcgagtccga gcatctcgcg atcctcgtcc gtgtcgccat aggcgtagat
     1681 gacgggatag cggtcgaggt cgtagcgctc gcgaatgcgc cgcactttgg ccggacctga
     1741 gcactcgccg ccggcatagc ggcccgtcag cacgccatgg cgctcgtcga gctcggtgca
     1801 gatcgccgtg acgccgaccg actcgcacca cggcgttaca tatgcgccga gcgacgccga
     1861 cacgacgacc accgtatcgc cctgacgttt gtgccagtcg atgcgttcga gcgcgagcgg
     1921 ccggacgacg ccgggcagga tgtcccgcgc gtactgccgg ccccgcgcgc gcaggtccgc
     1981 ggcgctgcgc ccggcgaagg cgagacgggc gacgatcgga cggctcgtgc gcgccgaaat
//
LOCUS       DASSYW010000478         2898 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1351467, whole genome shotgun sequence.
ACCESSION   DASSYW010000478 DASSYW010000000
VERSION     DASSYW010000478.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2898)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2898)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2898
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1351467"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..266
                     /locus_tag="VFN38_07695"
     CDS             <1..266
                     /locus_tag="VFN38_07695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011685.1"
                     /translation="LGLQVNLRVEQEVTKTLQLVAGLYTRLGHRVSDDPELHHMLQPL
                     DVKAIERDLLEQIEAATSQRHHNTMLDDPPPGPSVEPRNSVLR"
     gene            391..807
                     /locus_tag="VFN38_07700"
     CDS             391..807
                     /locus_tag="VFN38_07700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011686.1"
                     /translation="MKRLLVLALSLALGFTATACSDSTGPGASLAGTYSLQTINGQPL
                     PVVVENSASLYSEVVLAQLTINANGSYNSLPRYRDTYPGQAPVLVDETFTGYWTLSGD
                     RLVLTEDGYPNDPTYGTVSNNRITLSDFGFTLVYVR"
     gene            complement(889..>2898)
                     /gene="acnA"
                     /locus_tag="VFN38_07705"
     CDS             complement(889..>2898)
                     /gene="acnA"
                     /locus_tag="VFN38_07705"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003994 - aconitate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aconitate hydratase AcnA"
                     /protein_id="HET9011687.1"
                     /translation="GSTATDLVLTVTEMLRKKKVVGKFVEFYGPGLSHLSLADRATIA
                     NMAPEYGATMGFFPVDDETLKYLRLSGRSEQHVALVEAYTKAQGLFRTDATPDPVFTD
                     SIELDLGTVVPSLAGPRRPQDRVPLSKAAAMYKESLAADLEKIATPAGAVAAHRKATA
                     VSAEPELAKALIREDGEGGDQPQHEAVSCTFNGQTFNLKHGAVVIAAITSCTNTSNPG
                     VMLAAGLLARNAVKKGLSVKPWVKTSLAPGSKVVTDYFNAAGVTPYLDKLGFNLVGYG
                     CTTCIGNSGPVPEPIAKAIEDGKLFVASVLSGNRNFEGRVNPLTRYNYLASPPLVVAY
                     ALAGRMDLDITREPIGIGTDGPVFLRDIWPSAQEVQDEVMKSVKQEFFRTQYADVFKG
                     DEHWQGLQVPKGETYAWQPDSTYVKNPPYFEGITMTPPGVTPIAGAKALAMLGDSITT
                     DHISPAGNIPAASPAGAWLLAHGVAKKDFNSYGARRGNHEVMMRGTFANIRLRNEMAP
                     GTEGGWTATEPGGTPTFIYDAAMEYAKTKTPLVIIAGKEYGTGSSRDWAAKGTVLLGV
                     RAVIAESFERIHRSNLVGMGVLPLEFTNGETRQSLGLTGFERFDIQGLDASLAPRRQL
                     TVNATAKDGTVKSFKVLCRIDTPEELNYYKNGGILPYVLRSLARK"
BASE COUNT          429 a         1005 c          968 g          496 t
ORIGIN      
        1 agctggggct gcaggtcaat ctccgggtgg agcaggaggt gacgaagacg ctgcagctcg
       61 tcgccggcct ctacaccagg ctcgggcacc gcgtgagcga cgaccccgag ctgcaccaca
      121 tgctccagcc cctggacgtg aaggcgatcg agcgcgacct gctcgagcag atcgaggcgg
      181 ccacgtcgca acggcatcac aacacgatgc tggacgatcc acctccggga ccctcggtgg
      241 agccgcgaaa ctcggtgctg cgctgacatt cgatggctgg tcagggacga ccgggcactt
      301 ccggtcgtcc atgaggtatc acgctgtaac cgtcgcgtcc ggttcgtgtc cggacttctc
      361 ccatcgtacc cgaacagagg agatctcctc gtgaaacgcc ttctcgtcct cgccctgtcc
      421 ctcgcgctcg gcttcaccgc cacggcctgc tccgactcca ccgggccggg tgcgtcgctc
      481 gccggcacgt actcgctgca gaccatcaac ggccagccgc tgccggtggt ggtggagaac
      541 agtgcctcgc tctactccga ggtggtgctg gcgcagctca ccatcaacgc caacggcagc
      601 tacaacagcc tcccccggta ccgcgacacc tatccgggcc aggcgcccgt gctggtggac
      661 gagaccttca ccggctactg gacgttgagc ggcgaccgcc tcgtgctgac cgaggatgga
      721 taccccaacg atcccaccta cgggacggtc tcgaacaacc gcatcaccct gagcgatttc
      781 ggcttcacgc tggtgtacgt ccgataacgt gggcgcaaca gtgacgaagg gagtgaccgc
      841 atcgcgcggt cactcccttc gtcacatcgc cgtgcggcgt gccgcggatc acttccgcgc
      901 gagcgagcgc agcacgtagg gcaggatccc accgttcttg tagtagttca gctcctccgg
      961 ggtgtcgatg cggcagagca ccttgaacga cttcaccgtg ccgtccttcg cggtggcgtt
     1021 cacggtgagc tgccggcgcg gcgcgagcga ggcgtcgagc ccctggatgt cgaagcgctc
     1081 gaagccggtg agcccgagcg actgccgcgt ctcgccgttc gtgaactcca gggggagcac
     1141 gcccatgccg acgaggttgg agcggtggat gcgctcgaag ctctcggcga tcaccgcgcg
     1201 gaccccgagg aggaccgtcc ccttggccgc ccagtcgcgc gacgatccgg tgccgtactc
     1261 cttgcccgcg atgatcacga ggggcgtctt cgtcttcgcg tattccatcg ccgcgtcgta
     1321 gatgaacgtg ggcgtgccgc cgggctccgt cgccgtccac ccgccctcgg tgccgggcgc
     1381 catctcgttg cgcaggcgga tgttggcgaa ggtgccgcgc atcatcacct cgtggttgcc
     1441 gcggcgggcg ccgtacgagt tgaagtcctt cttcgcgacg ccgtgcgcca gcagccacgc
     1501 cccggcgggg ctcgccgcgg ggatgttgcc cgccggcgag atgtggtccg tcgtgatgga
     1561 gtcgccgagc atcgccagcg ccttcgcgcc ggcgatcggc gtcacgccgg gcggcgtcat
     1621 cgtaatcccc tcgaagtacg ggggattctt cacgtaggtc gaatcgggct gccaggcgta
     1681 cgtctcaccc ttggggacct gcagcccctg ccagtgctcg tcacccttga agacgtcggc
     1741 gtactgggtg cggaagaact cctgcttcac gctcttcatg acctcgtcct gcacctcctg
     1801 cgcgctcggc cagatgtcgc gcaggaacac cgggccgtcg gtgccgatgc cgatgggctc
     1861 acgggtgatg tcgagatcca tccggccggc gagcgcatac gcgacgacga gcggtggcga
     1921 cgcgaggtag ttgtagcggg taaggggatt gacgcgcccc tcgaagttgc ggttgcccga
     1981 caggacgctc gccacgaaca gcttgccgtc ctcgatcgcc ttggcgatgg gctccggcac
     2041 gggacccgag ttgccgatgc aggtcgtgca gccgtagccc acgaggttga agccgagctt
     2101 gtcgaggtac ggggtgacgc ccgccgcgtt gaagtagtcg gtgaccacct tggagcccgg
     2161 cgcgagcgag gtcttcaccc acggcttcac gctgagcccc ttcttcaccg cgttccgcgc
     2221 cagcaggccg gcggccagca tcacccccgg gttcgaggtg ttcgtgcaac tcgtgatcgc
     2281 cgcgatcacc accgcgccgt gcttcaggtt gaacgtctgg ccgttgaagg tgcaggagac
     2341 cgcctcgtgc tgcggctggt cccctccctc gccgtcctcg cggatcagcg ccttcgcgag
     2401 ctcgggctcg gcgctcaccg cggtcgcctt ccggtgcgcc gccacggcgc cggcgggggt
     2461 ggcgatcttc tccaggtccg ccgcgagcga ctccttgtac atcgcggccg ccttgctcag
     2521 cggcacgcgg tcctgcggac gacgcgggcc ggcgaggctg ggcaccaccg tgcccaggtc
     2581 gagctcgatg gagtcggtga acaccgggtc gggggtcgcg tcggtgcgga agagcccctg
     2641 ggccttcgtg tacgcctcca cgagggcgac gtgctgctcg ctgcgcccgc tcaggcgcag
     2701 gtacttcagc gtctcgtcgt ccacggggaa gaagcccatc gtcgccccgt actcgggcgc
     2761 catgttcgcg atcgtcgcgc gatcggcgag cgagaggtgg ctcaggccgg ggccgtagaa
     2821 ctcgacgaac ttccccacca ccttcttctt gcgcagcatc tcggtcacgg tgagcacgag
     2881 gtccgtggcc gtggagcc
//
LOCUS       DASSYW010000479         3230 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1602362, whole genome shotgun sequence.
ACCESSION   DASSYW010000479 DASSYW010000000
VERSION     DASSYW010000479.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3230)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3230)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3230
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1602362"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2426
                     /locus_tag="VFN38_07710"
     CDS             <1..2426
                     /locus_tag="VFN38_07710"
                     /inference="COORDINATES: protein motif:HMM:NF027637.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="zinc-dependent metalloprotease"
                     /protein_id="HET9011688.1"
                     /translation="NGRQTAAAQAPGDTAGRGAGGPAAPRPYNRVITADARTRRGMFS
                     AHRVGDKLYFEIPSRELGKDMLFVGRYARAAAANPTLPGGQFGEYGGDQFAEETLRWE
                     RNGNRVILRAPSFTITADTGLAVYRAVQAANYAPIVATFNVEAFGPDSAAVIDVTRLF
                     TTSIPELQAIRGQVDATRSFVERAIAFPDNVEIEATQTGVIQQPGAQPAPGGAPRPAS
                     SVLAHWSLVRLPEQPMMPRRFDERVGFFSERYVDFGAEQRAANRRYITKYRLECSDRK
                     VGDLCYPKKPITYYVDPNTPEKWQKWVRQAILDWQPAFEAAGFKDGIIAGDVPANDPD
                     WSPEDVRHTVIRWLPSTTENAQGPHVHDPRTGEILNGSVRMFQNVLNLQRDWYFTQAA
                     QVDPRARTWPMPDSLMGRLLEFVVAHEIGHTLGLQHDQIGSSTYPADSVRSASWVKKM
                     GHSPSIMDYSRFNYVAQPEDAIPLEDIVPRVGPYDKFAIMWGYKPIPGARTPDEERPT
                     LESWARMQDTIPWYRFSANNEYGAFGTQSEAVGDADPVKSTTLGFKNIERVIGYVPAA
                     ATERGEDNSDLREIYDRTVGQWATEANHVATMIGGGTVQYKSGSQTGPVYVTLPRARQ
                     AEAVRFLNDRVFATPTYLVKPEIAARIEAGGMINRINNAQSRVLNTVFDDGRLNRLLE
                     NEAVASNRADVYSLSNLLDDVRRGVWSEAYTGRAADAFRRELQNDYLTIINNKLNPQP
                     ESPQVTAQRQQFGIPRVLASDDAKSQLRGTLVQLRSDLRSARSGDRATQLHFQGAIKR
                     IDDILDPKK"
     gene            complement(2540..2926)
                     /locus_tag="VFN38_07715"
     CDS             complement(2540..2926)
                     /locus_tag="VFN38_07715"
                     /inference="COORDINATES: protein motif:HMM:TIGR02436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four helix bundle protein"
                     /protein_id="HET9011689.1"
                     /translation="MQNPANLEVFTHARALAVAVYRASAHFPSNEKFGLTTQMRRAAI
                     SVGSNIAEGCGRSGDRELVNFLHIALGSATELEFQALVAGDLEFLAADAAAEMLEEIR
                     RAKKMLSRLITALRSRIRTERPGKRQ"
BASE COUNT          542 a         1199 c         1030 g          459 t
ORIGIN      
        1 ccaacggccg tcagaccgcc gccgcccagg cgccgggcga caccgccggc cgcggcgccg
       61 gcggccccgc ggccccccgc ccctacaacc gcgtcatcac cgccgacgca cgcacccgcc
      121 gcgggatgtt ctcggcgcac cgcgtggggg acaagctcta cttcgagatc ccgtcgcgtg
      181 agctcggcaa ggacatgctg ttcgtcggcc ggtacgcccg cgccgccgcc gccaacccca
      241 cgctccccgg cggccagttc ggcgagtacg gcggcgacca gttcgccgaa gagacgctgc
      301 gctgggagcg caacggcaac cgcgtcatcc tccgcgcccc ctcgttcacc atcaccgccg
      361 ataccggcct cgccgtgtac cgcgccgtgc aggcggccaa ctacgcgccc atcgtcgcga
      421 ccttcaacgt cgaggccttc ggccccgaca gcgccgccgt catcgacgtc acgcgcctgt
      481 tcacgacgag catccccgag ctccaggcca tccgcggcca ggtggacgcc acgcgctcgt
      541 tcgtcgagcg ggcgatcgcc ttccccgaca acgtggagat cgaggccacc cagacgggcg
      601 tcatccagca gcctggtgcc cagcccgccc cgggcggcgc cccccgtccc gcgtcgagcg
      661 tgctcgcgca ctggagcctc gtgcggctcc ccgagcagcc gatgatgccg cgccggttcg
      721 acgagcgcgt cggcttcttc tccgagcgct acgtggactt cggcgccgag cagcgcgccg
      781 cgaaccgccg gtacatcacc aagtaccgtc tcgagtgcag cgaccggaag gtcggggacc
      841 tctgctaccc gaagaagcca atcacgtatt acgtggatcc caacacgccg gagaagtggc
      901 agaagtgggt gcgccaggcg atcctcgact ggcagcccgc gttcgaggcc gccggcttca
      961 aggacggcat catcgccggc gacgtgccgg ccaacgatcc cgactggtcg cccgaggacg
     1021 tgcgccacac cgtgatccgc tggctcccca gcaccaccga gaacgcgcag ggcccgcacg
     1081 tgcacgaccc gcgcaccggc gagatcctca acggctccgt gcgcatgttc cagaacgtgc
     1141 tgaacctcca gcgcgactgg tacttcacgc aggcggcgca ggtggatccg cgcgcccgca
     1201 cctggccgat gcccgattcg ctgatgggcc gcctgctgga gttcgtcgtc gcccacgaga
     1261 tcggccacac cctcggcctc cagcacgacc agatcggcag ctccacgtac ccggccgaca
     1321 gcgtgcgcag cgcgagctgg gtgaagaaga tgggccacag cccgagcatc atggactact
     1381 cgcgcttcaa ctacgtggcg cagccggaag acgcgatccc gctcgaggac atcgtgccgc
     1441 gcgtcggccc gtacgacaag ttcgccatca tgtggggtta caagccgatc ccgggcgctc
     1501 gcacgccgga cgaggagcgc ccgacgctcg agagctgggc gcgcatgcag gacaccattc
     1561 cctggtaccg cttctcggcc aacaacgagt acggcgcctt cggcacgcag agcgaggcgg
     1621 tgggcgacgc cgatccggtg aagtccacca cgctcgggtt caagaacatc gagcgcgtga
     1681 tcggctacgt gcccgcggcg gccaccgagc gcggcgagga caactccgac ctcagggaga
     1741 tctacgaccg cacggtgggg cagtgggcca ccgaggcgaa ccacgtcgcc acgatgatcg
     1801 gcggcggcac cgtgcagtac aagtcgggga gccagaccgg ccccgtctac gtcacgctgc
     1861 cgcgcgcgcg gcaggcggag gcggtgcgct tcctgaacga ccgcgtgttc gccacgccga
     1921 cctatctcgt gaagcccgag atcgcggcgc ggatcgaggc gggcgggatg atcaaccgca
     1981 tcaacaacgc gcagtcgcgc gtgctgaaca ccgtgttcga cgacgggcgc ctcaaccgcc
     2041 tgctggagaa cgaggccgtc gcgtcgaacc gcgccgacgt ctattccctg agcaacctgc
     2101 tcgacgacgt gcgccgcggg gtgtggagcg aggcgtacac cgggcgcgcg gccgacgcct
     2161 tccgccgcga gctccagaac gactacctca cgatcatcaa caacaagctg aacccgcagc
     2221 cggagagccc gcaggtcacg gcgcagcggc agcagttcgg catcccgcgc gtgctggcga
     2281 gcgacgacgc caagtcgcag ctccgcggca cgctggtgca gctccggagc gacctccggt
     2341 cggcccgttc cggcgaccgc gcgacgcagc tgcacttcca gggcgccatc aagcggatcg
     2401 acgacatcct cgatcccaag aaataggaaa acgggaggac gggaagacgg gatgaccgga
     2461 tgaccggatg accgaatgac cggaaggacg gagggggcgc atcggacagt ccggtgcgcc
     2521 ccttccgcta ttcctgctgc tactggcgct tccccggtcg ctcggttcgt attcgacttc
     2581 tcagcgccgt gatcaggcgg gagagcatct tcttcgcgcg gcggatctct tcgagcatct
     2641 ccgcagcggc atcggcggcg aggaattcca gatcacccgc aaccagcgcc tggaattcca
     2701 gctcggtggc cgatccgagc gcgatgtgca ggaagttcac gagctcccgg tcaccgctcc
     2761 gcccgcatcc ttcggcgatg ttcgaaccga cggagatggc agctcggcgc atctgcgtcg
     2821 tgagcccgaa cttctcgttg gaggggaagt gcgccgaggc gcgatacacc gccacggcca
     2881 gcgccctcgc gtgcgtgaag acttccaggt tggcaggatt ctgcatggag gaggtttacc
     2941 gcccgcccgc cctggatccg tcatcgaatc gttgcaccag ggattggaac cacgcgactg
     3001 gacggaatgc ttccgggcgg aacgatgaaa ggcaccccga accagtccgg tgtgcctttc
     3061 tccgtcatcc cgtcttcccg tcctcccgtc ctcccgtcct cccgtcttcc cgtcttcccg
     3121 tcctcccgtc ttcccgtctt cccgtcttcc cgtcctcccg tcagaccgcc tctctccgcg
     3181 gctgctccga gctgcccgag agcgacacga tgcgcgcctg ggtgcggatc
//
LOCUS       DASSYW010000480         2643 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_60428, whole genome shotgun sequence.
ACCESSION   DASSYW010000480 DASSYW010000000
VERSION     DASSYW010000480.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2643)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2643)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2643
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60428"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(366..590)
                     /locus_tag="VFN38_07720"
     CDS             complement(366..590)
                     /locus_tag="VFN38_07720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011690.1"
                     /translation="MGLSRHRVRAAFALDAMTAILAVFILDGAVAGVAAFAAMLGFIF
                     ACIAALRQPNADLGGRTDRTGLAGWIGHWF"
     gene            complement(669..1766)
                     /locus_tag="VFN38_07725"
     CDS             complement(669..1766)
                     /locus_tag="VFN38_07725"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HET9011691.1"
                     /translation="MTSVPRPQLLTPDRRAPTMARVAVWLLVLVLVGCGGGRAEPPLA
                     TRLQRTLDRERTMQHIPGAAAAVVAGGRVVWVGASGLADVRRRVPVSRDTRFAIASVT
                     KPFVAGLVVHLAATGVLDLDDPLSRWVPRFPGARRITLRQLLDQTSGLDDYVGEGRFV
                     AAERRRGPEFAWAPRELLRYVPSPLAAPGERWNYSNANYLLLGLVVERATHRRIGPQL
                     PDAFVFQPQERPAGEVAVGYFDGRPTRNDPFVPSREIASSAWSSGNLLASAGDLARVA
                     DDLLRAAPRRGMTRWVKAFGDAPEYGLGLMHIRLAGQDAWGHSGDIYGFHADLWYLPS
                     ADVTVVALVNRNLQDGRRHLVEALARAAAGE"
     gene            complement(1763..>2643)
                     /locus_tag="VFN38_07730"
     CDS             complement(1763..>2643)
                     /locus_tag="VFN38_07730"
                     /inference="COORDINATES: protein motif:HMM:NF024948.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF4129 domain-containing protein"
                     /protein_id="HET9011692.1"
                     /translation="LVHGAAGIDMPRAHASTAAGATAIVACVVLLAAMARRRVERAPD
                     ANGVRTAAVVAALTMLVAVAAIASNEPVRHFAPEAPQPGPDELERIGVIGSGFPVPGA
                     LAPEVYPPDCCGLDTGPDLSWVPVVMTAAGLVGLLAAAVLLVPQLLRWRPRRARLRWR
                     RRRRRRSGERPATEPAVIGSSPAAAEPDAEAARRILDAALEPLHEPTDPRAAVIEAYA
                     RMEQILASRELGRRIPGAPREYLTRVLRQQGMPEHSLASLTELFEEARFSAHPIPTSA
                     SARARSELKTALARLP"
BASE COUNT          409 a          960 c          921 g          353 t
ORIGIN      
        1 gaagctgtca acacgaagcc ggggtgcaag ccagtcgtca ggtcacgcgt cagagccaaa
       61 ttctgcgcct cgccaaggcc gaatcccgtc gaaattggac cccggattgg accccgtgcc
      121 cagatgccac cagacggcag actgcggcat ttagcagggc ttttctgcga tcggggagac
      181 aggatttgaa cctgcgaccg cccggccccc agccggagcg atccaggcgt acctactgct
      241 cttcagcgct cgtgggccat ctgggttgag ctgagttggt ctcggttgcg ctcagtttgt
      301 tccccggatt gaaccccgcg gggatcgctc ctgcctcggc gagcaagaac ctacgtgtga
      361 ttcgtctaga accagtggcc gatccacccg gcgaggccgg tccgatcggt gcgcccaccc
      421 aagtcggcat tcggttggcg cagtgcggcg atgcaggcga agatgaaccc aagcatcgcc
      481 gcaaacgccg ccacgcctgc gactgcgccg tcaaggatga acaccgcaag gatcgccgtc
      541 atcgcgtcca gagcgaaagc ggcgcgtaca cggtgacggc tcagacccac gcgggcgact
      601 cctcgagtgc gtacgccgtc agacaacgag cccgctccgc gttcgcctgg gagcggcacg
      661 tcggcgggtc attcgcccgc cgccgcgcgc gccagcgcct cgaccaggtg ccggcggccg
      721 tcttggagat tgcggttgac gagcgcgacg acggtcacat cggccgacgg taggtaccag
      781 aggtcggcgt ggaagccgta gatgtcgccg ctgtggcccc aggcgtcctg gccggcgagc
      841 cggatatgca tgagcccaag cccgtactcg ggcgcgtcgc cgaacgcctt cacccagcgc
      901 gtcatccctc gacggggcgc cgcgcgcagc aggtcgtctg cgacgcgcgc aaggtcgccg
      961 gcgctcgcca gcaggttgcc cgacgaccac gcgctgctcg cgatctcccg gctggggacg
     1021 aacgggtcgt tgcgggttgg gcgcccgtcg aagtagccga ccgccacctc gccggccgga
     1081 cgctcctgcg gctgaaagac gaacgcatcc ggcaactgcg gtccgatgcg gcggtgtgtc
     1141 gcccgctcga cgaccagccc gagcagcagg tagttggcgt tggagtagtt ccagcgctcg
     1201 cccggcgccg ccaacggcga cgggacgtag cgcagcagct ctcgcggcgc ccacgcgaac
     1261 tccggaccgc gacgccgctc ggcggccacg aaacgcccct cgcccacgta gtcgtcgagt
     1321 cccgaggtct gatcgagcag ctggcgcagc gtgatccggc gggcgcccgg aaagcgcggc
     1381 acccagcggc tgagcgggtc gtccaggtcg aggacgccgg tggcggcgag gtgcaccacc
     1441 agtccggcga cgaacggctt ggtcacgctc gcgatggcaa accgcgtgtc ccggcttacc
     1501 ggcactcgcc ggcgcacgtc cgccaacccg ctcgcgccca cccagaccac gcgcccacca
     1561 gcgaccaccg cggcggcggc gcccgggatg tgctgcatgg ttcgctcgcg gtcgagggtt
     1621 cgctgcagcc gcgtggcgag cggcggctcg gcacgcccgc caccgcagcc gacaagaacg
     1681 aggaccagca gccacaccgc gactcgcgcc atggtgggag cccgacgatc cggagtgagc
     1741 agctgcggcc gtggcaccga cgtcacggga gcctcgccag cgcggtcttc agctcgctgc
     1801 gcgctcgggc cgacgccgag gtcgggatcg gatgcgcact gaaccgtgcc tcctcgaaga
     1861 gctcggtgag gctcgccaac gagtgctcgg gcattccctg ctggcgcagc actcgcgtga
     1921 ggtactcgcg gggcgcccca gggatacgcc ggccgagctc ccgcgacgcg aggatctgtt
     1981 ccatccgcgc gtatgcctcg atcacggccg cgcgcgggtc ggtcggttcg tgcagcggtt
     2041 ccagcgcggc gtcgagtatt cgccgcgccg cctcagcgtc gggctcggcc gcagcgggcg
     2101 atgacccgat cacggctggc tccgtcgccg gcctctcgcc gctgcgcctg cgccgccttc
     2161 gcctccacct caggcgagcc cgcctcggcc gccatcgcag gagctgtggc acgagcagga
     2221 cggcggcggc gagcagcccg acgaggccgg ccgcggtcat gaccaccggc acccagctca
     2281 ggtcaggtcc ggtatccagg ccgcagcagt ccggtgggta gacctccggc gccagggcgc
     2341 ccgggaccgg gaagcccgag ccgatgaccc cgatgcgctc gagctcgtcg ggaccgggct
     2401 ggggtgcctc cggagcgaag tggcgaaccg gctcgttgct ggcgatggcc gcgacggcga
     2461 cgagcatcgt caacgccgcg acgacggcag ccgtccggac cccattcgca tcgggtgctc
     2521 gctcgacacg ccgacgtgcc atcgccgcga ggaggacgac gcacgcgacg atcgccgtag
     2581 ctccggccgc cgtcgacgcg tgcgcgcgcg gcatgtcgat gccggcagcc ccatgcacca
     2641 gca
//
LOCUS       DASSYW010000481         4478 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1755330, whole genome shotgun sequence.
ACCESSION   DASSYW010000481 DASSYW010000000
VERSION     DASSYW010000481.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4478)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4478)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4478
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1755330"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(19..768)
                     /locus_tag="VFN38_07735"
     CDS             complement(19..768)
                     /locus_tag="VFN38_07735"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone/menaquinone biosynthesis
                     methyltransferase"
                     /protein_id="HET9011693.1"
                     /translation="MHESPVDERHAETAAAGGAEKRAYVRTVFEQIAPRYDLLNHLLS
                     FNVDRWWRRRALRALEWKRAPCGSYLDLCAGTLDVGAQLSRQQAFGGFVIGADFAVPM
                     LAAGAGKAPATVVAPVAADAQQLPLRDASLDGAIVAFGIRNVASLDVALREVHRVLAP
                     GARFVVLEFTTPRSPIVRLVYHAYFHRLLPFVGGLISGHRTAYRYLPQSVAHFPAEPE
                     LADRMRAAGFDDVRWTSLSFGIAAIHSGRRT"
     gene            897..1499
                     /locus_tag="VFN38_07740"
     CDS             897..1499
                     /locus_tag="VFN38_07740"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HET9011694.1"
                     /translation="MLRALDLANLPDADVVALALEGRDAAHRELIKRYERPVFSLVFR
                     MVRDRELAEDLTQDTFVKVLSHLDRYRSDFKFSSWLFKIANNVAIDHLRRRQLDTVSM
                     DGSPHAMTAEAIESTRFDVADSTENALDEMEAKELGSAIERAIARLRPEYRSCIMLRH
                     VEGRSYEEIASTLDLPLGTVKTYIHRARHELRRALEHTRE"
     gene            1567..2151
                     /locus_tag="VFN38_07745"
     CDS             1567..2151
                     /locus_tag="VFN38_07745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011695.1"
                     /translation="MNHRHLLPNEIDLLVDGEAGFGVAPLRAHTLECEDCRARLDDAR
                     IVVDALESLPHFAPDSRLADRIMAQVPVFVPAHVAARDSVRRWLPTSAAARVAAVAVG
                     TTAAGALTLAMLWLATRGDAVLFVSGLLGDRVRSAVAGAARDLMVALLGESALSALQA
                     TGAVGTSLLILGFLLTAAGTVAGIRRLATAGRRA"
     gene            2153..3244
                     /locus_tag="VFN38_07750"
     CDS             2153..3244
                     /locus_tag="VFN38_07750"
                     /inference="COORDINATES: protein motif:HMM:NF016408.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymer-forming cytoskeletal protein"
                     /protein_id="HET9011696.1"
                     /translation="MRAATSLLVVLAAALPLPVLGALRAQDSSRASLVRDLDRLAKAE
                     SIGNLPSPDSVSRGPRTIAAGSTVRGTVVARGPVLVAGRVDGSVVSLAGDVTVAKGGV
                     VTGDALAVGGRVIAEGEVDGEMRAMSALPTTLPRAAGAADLRTPVARTYDALRLVAGT
                     FGVLLIIAVGVLLFAGPNLDEVVATLERRFGRAFWVGLLGQVLILPALVVLVVALAVS
                     VIGILLIPFAIVAYAIAIAGLVTLGFLAVARLVGGAVRSSSRDTTPRSRALAALAMGL
                     AIFCVLWVVAAALTWAPLAATVVRAAAVAVTWTAMTLGLGAAMLSRAGTHRLVVTGAR
                     PAELASWQTPTPLTGVVAARRPAASVGQR"
     gene            3241..4116
                     /locus_tag="VFN38_07755"
     CDS             3241..4116
                     /locus_tag="VFN38_07755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="LiaF domain-containing protein"
                     /protein_id="HET9011697.1"
                     /translation="MNRRITAFPMVAVAVALVLTARPLHAQAPLWRTVLLSRQLRDTQ
                     PQRIRVKYGAGKLELRGTPDPLLYAMRLRYDERRAAPLHRYDAEQHSTVLGLESIGSG
                     LPASRGDRDDESGELNLALPTGVPLELDLELGGTKSALELGGLALRSLRLECGATDGA
                     VVFSTPNRARMRDMEIDVGAADFSAVMLGNANAEQVRVRGGVGVIDLDFGGTWTQDMN
                     VAARLAVGKLTLRIPSDVGVRLEVQRVAAGFEHEGFVKRDDAWYSDNYDTARYKLRLR
                     AETYFGQIDIQRGTR"
     gene            complement(4148..>4478)
                     /locus_tag="VFN38_07760"
     CDS             complement(4148..>4478)
                     /locus_tag="VFN38_07760"
                     /inference="COORDINATES: protein motif:HMM:NF042701.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SAM hydroxide adenosyltransferase"
                     /protein_id="HET9011698.1"
                     /translation="LDALGPPFGEPIIRRTPEATRRADGIIEGTVIAIDRFGTAVTNL
                     MARRGGVIMVDGRTLPLSRSYSDVGGGELVALVGSSGLVEIAQRDGSAAAHLRLTRGS
                     GVLLLPS"
BASE COUNT          598 a         1694 c         1545 g          641 t
ORIGIN      
        1 tgaggtgcgg cggtgggttc acgtccgtcg cccggagtgg atggccgcga tcccgaacga
       61 cagcgacgtc cagcgcacgt cgtcgaatcc cgccgcgcgc atccggtccg ccagctccgg
      121 ctcggccgga aagtgcgcca ccgactgcgg caggtagcga tacgccgtgc ggtgcccgct
      181 gatcaacccg ccgacgaagg gcagcagccg gtggaagtat gcgtgataga cgagtcggac
      241 gatcggcgag cgcggcgtcg tgaactcgag caccacgaaa cgcgcgcccg gcgcgagcac
      301 ccgatgcact tcgcggagcg ccacgtccag ggaggcgacg ttgcggatcc cgaacgccac
      361 gatggcgccg tccaggctcg cgtcgcgcag cggaagctgc tgcgcgtccg ccgccaccgg
      421 tgccacgacc gtcgccggcg ccttgcccgc cccggccgcc aacatcggca cggcgaagtc
      481 cgcgccgatc acgaacccgc cgaaggcctg ctgcctcgag agctgggcgc cgacgtcgag
      541 ggtaccggcg cagaggtcca gataacttcc acacggcgcg cgcttccact ccagcgcgcg
      601 caacgcgcgg cggcgccacc atcggtcgac gttgaagctc aacaggtggt tgagcagatc
      661 gtagcgcggc gcgatctgct cgaacaccgt gcgcacgtac gcgcgcttct cggctcctcc
      721 cgcggccgcc gtctcggcgt gccgctcgtc caccggcgat tcgtgcatcg cggaaagctc
      781 gtcggcggca ggaaaccggg caagcgcaac tggattgcgt tcgccacggc gcgtagcttt
      841 cccgcagccg cgccttccgt ccgccgcagc gcgcgcggca tccccgccac cctgctgtgc
      901 tacgagccct cgacctcgcg aatcttcccg atgccgacgt ggtggccctc gccctcgagg
      961 gccgcgacgc ggcacatcgg gaactgatca agcggtacga gcggcccgtc ttctcgctcg
     1021 tcttccgcat ggtgcgcgat cgcgagctgg ccgaggacct cacccaggac accttcgtca
     1081 aggtgctctc gcacctcgac cggtatcggt ccgacttcaa gttctcctcg tggctcttca
     1141 agatcgccaa caacgtcgcg atcgatcacc tgcgccggcg ccagctcgac acggtgagca
     1201 tggacggctc gccccacgcc atgacggcgg aggcgatcga atccacccgg ttcgacgtcg
     1261 ccgacagcac cgagaatgcg ctcgacgaga tggaggccaa ggagctcggc tcggccatcg
     1321 agcgggccat cgcccgcctc cgccccgagt accgttcctg catcatgctc cggcacgtcg
     1381 aaggccggtc gtacgaggag atcgcgtcca ccctcgacct tcccctgggg acggtcaaga
     1441 cctacatcca ccgcgcccgg catgagcttc gccgtgcgct ggagcacacc cgggaatgac
     1501 cttccgaccg accccgatcg ggggtgaaac cccgtcccac ccgggaccgt acatcggtac
     1561 gagaccatga atcacagaca cctgctcccc aacgagatcg acctgctggt cgacggcgag
     1621 gccggcttcg gcgtcgcccc gcttcgtgcg cacaccctcg agtgcgagga ctgccgggcg
     1681 cggctggacg acgcgcgcat cgtcgtggat gcgctggaga gcctgcccca cttcgcgccg
     1741 gactcccgcc tggccgaccg gatcatggcc caggtccccg tgttcgtccc ggcgcacgtg
     1801 gcggcgcgag actcggtccg tcgatggctc cccacgtccg cggcggcccg ggtcgccgcc
     1861 gtggctgtcg gcaccaccgc cgccggcgcg ctcaccctcg ccatgctgtg gctggccacg
     1921 cgcggcgacg cggtgctctt cgtgagcggg ctgctgggtg atcgcgtccg gtccgccgtg
     1981 gcgggggcgg cgcgcgacct catggtcgcg ctcctgggcg agtccgcgct gagcgcactg
     2041 caggcgacgg gcgcggtcgg cacctccctg ctcatcctgg ggtttctcct caccgccgcc
     2101 ggcacggtgg cgggcatccg gcggctggcc acggcagggc ggcgcgccta ggatgcgcgc
     2161 cgccacgagt cttctcgtcg tcctggccgc ggcactcccg ctcccggtgc tgggcgcgct
     2221 tcgcgcccag gacagcagtc gcgccagcct cgttcgcgac ctcgaccgcc tcgccaaggc
     2281 agaatcgatc gggaatctcc cgtcgcccga cagcgtcagc cgcggccccc gcaccatcgc
     2341 ggcgggtagc acggtgcgcg gcacggtggt cgcccgcggc cccgtcctcg tcgccggccg
     2401 cgtggacggc agcgtcgtga gcctcgccgg agacgtcacg gtggcgaagg ggggggtcgt
     2461 gaccggcgac gccctggcgg tcggcggtcg ggtgatcgcc gagggcgagg tggacggcga
     2521 gatgcgcgcc atgagcgcgt tgccgaccac actcccgcgc gccgccggcg cggccgacct
     2581 ccgcaccccg gtcgcccgca cctacgacgc gctgcgtctc gtcgccggca cgttcggggt
     2641 gctgctcatc atcgccgtcg gcgtgctcct cttcgccggc ccgaatctcg acgaagtggt
     2701 cgccaccctg gagcggcgct tcggccgcgc attctgggtc ggcctgctcg gccaggtgct
     2761 gatcctcccg gcgctcgtcg tgctcgtggt cgcgctggcg gtgagcgtca tcggcatcct
     2821 gctcatcccc ttcgccatcg tcgcctacgc catcgcgatc gccgggctgg tcacgctcgg
     2881 gttcctcgcg gtggcccgtc tggtcggcgg cgcggtccgg tcctcgtccc gcgataccac
     2941 gccgcgttcg cgtgcgctcg cggccctggc catggggctc gcgatcttct gcgtgctctg
     3001 ggtggtcgcg gccgcgctca cctgggcgcc gctcgctgcc acggtcgtgc gcgccgcggc
     3061 ggtggccgtc acctggacgg cgatgacgct cggcctcggc gccgccatgc tgtcccgcgc
     3121 cggcacgcat cgcctcgtcg tcacgggcgc gcggcccgcg gagctggcgt cgtggcagac
     3181 gccgacgccg ttgaccgggg tcgtcgccgc gcgccggccg gcggcctccg tggggcaacg
     3241 atgaaccgcc gcatcacggc gttcccgatg gtcgccgtcg ccgtcgccct cgtgctcacg
     3301 gctcgaccgc tgcacgcaca ggcgccgctg tggcgaaccg tgctgctctc gcgccagctc
     3361 cgtgatacgc agccgcagcg catccgcgtg aagtacggcg ccgggaagct ggagctgcgg
     3421 ggcacgccgg atccgctgct ctacgccatg cgcctgcgct acgacgagcg gcgcgccgcc
     3481 ccactccatc gctacgacgc cgagcagcac agcaccgtgc tcggactgga gtccatcggc
     3541 agcggactgc ccgcgtcccg cggcgatcgg gacgacgagt ccggtgagct gaacctcgcg
     3601 cttcccaccg gcgtgcccct cgagctcgac ctcgagctgg gcggcacgaa gtcggcgctc
     3661 gagctcgggg ggctcgccct gcgctcgctg cgcctcgagt gcggcgccac cgacggcgcg
     3721 gtcgtcttct ccacgcccaa ccgcgcgcgg atgcgcgaca tggagatcga cgtcggcgcc
     3781 gccgactttt ccgccgtgat gctcggcaac gccaacgcgg agcaggtgcg cgtgcgaggc
     3841 ggggtggggg tgatcgacct cgatttcggc gggacgtgga cgcaggacat gaacgtcgcc
     3901 gcccggctgg cggtgggcaa gctgacgctc cgcatcccca gcgacgtcgg cgtacgcctc
     3961 gaggtgcagc gcgtcgccgc aggcttcgag cacgagggat tcgtcaagcg cgacgacgcc
     4021 tggtattccg acaactacga cacggcgcgc tacaagctcc ggcttcgcgc cgagacgtac
     4081 ttcggacaga tcgacatcca gcgcggcacg cgctgaccgg cggcgcggcg cggaagggcc
     4141 gcgtcagtca cgaggggagg agcaggacgc cgctgccgcg cgtgagccgc agatgcgccg
     4201 cggcgctgcc gtcgcgctgc gcgatctcca ccagcccgct ggagcccacg agagccacga
     4261 gctcgccacc gcccacgtcg gagtaggagc gcgagagcgg cagcgtcctt ccatccacca
     4321 tgatcacgcc gccgcgacgc gccatcaggt tcgtcaccgc ggtcccgaag cggtcgatcg
     4381 cgatcacggt gccctcgatg atgccgtcgg cgcgacgcgt cgcctccggc gtgcgccgga
     4441 tgatcggctc accgaacggg ggacccagcg cgtcgagc
//
LOCUS       DASSYW010000482         2432 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_66208, whole genome shotgun sequence.
ACCESSION   DASSYW010000482 DASSYW010000000
VERSION     DASSYW010000482.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2432)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2432)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2432
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66208"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..420)
                     /locus_tag="VFN38_07765"
     CDS             complement(<1..420)
                     /locus_tag="VFN38_07765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011699.1"
                     /translation="MRVVIAKKLLSTVGGSETFARALARELRATGHDVRLVGMRPAWV
                     RPAMTTTSNMTLLPVRGGKLGAAIDGLFPTTLVRDDDLRKAVRGAEVVHSIAREWASA
                     LERAARAEGAAFVETPLVHPGQPFSGDGAPDVARYRRD"
     gene            complement(430..1572)
                     /locus_tag="VFN38_07770"
     CDS             complement(430..1572)
                     /locus_tag="VFN38_07770"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HET9011700.1"
                     /translation="MRILFTKRTFAPMGGSESLTYQFATRLAARGHDVRVVCGQAFDD
                     RARYTENGVDVVQVKPRGGLLGMVADASTLVDLMRVDELARYAEDRDLIHNVGREYLD
                     SSLRVAEELDLPIVLTPLAHPGQFHGGDTSSDFERYRRASAITTMTEWERGWYASHGI
                     DPYRVVMTGMGPNASRSRDGAGFRARHGIPADAPIVLFIGRRERYKGFIHVLDSADLV
                     WRTHPDTRFVFIGVPGFYGAMVDEFARYTDERIVAIEKASGAEKSAALDACALYAMPS
                     LHETFGIGYLEAWLHEKPVIGGDIPPLREVITHGTDGLVERQKVEDIAAAVTALLDDA
                     GLRQRMGRAGAAKLAERWDWDRVMDRVEDAYTHAASSHITAAEALA"
     gene            complement(1626..2153)
                     /locus_tag="VFN38_07775"
     CDS             complement(1626..2153)
                     /locus_tag="VFN38_07775"
                     /inference="COORDINATES: protein motif:HMM:NF025637.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HET9011701.1"
                     /translation="MAVIDANVLVLNLDFQPLNVCNVRRAVVLLAKEKATVIEQNGHI
                     VTSERLRFPSPSVIRLAYHVKRPRPVVKLTRKEVLQRDDHTCQYCGKRGNDLTLDHVM
                     PRHRGGQHTWENVVAACRSCNHKKGGRTLAESKMQLLRMPKRPPATPTYLYASYVRGG
                     ERSWAKFIGLDEAAS"
     gene            2193..>2432
                     /locus_tag="VFN38_07780"
     CDS             2193..>2432
                     /locus_tag="VFN38_07780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003247145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011702.1"
                     /translation="MAPSQNGSNGHGPTGTWTLKTGLAQMLKGGVIMDVVTAEHAKIA
                     EDAGAVAVMALERVPADIRATGGVARMSDPEKILEI"
BASE COUNT          383 a          836 c          828 g          385 t
ORIGIN      
        1 gtcgcgccgg tatcgggcca catcgggcgc gccatcgccg gagaacggct gtcccggatg
       61 cacgagcggg gtctccacga aggccgcccc ctcggcgcgt gcggcgcgct cgagcgccga
      121 cgcccattcg cgcgcgatcg agtgcacgac ctccgccccg cgaacggcct tccgcaggtc
      181 gtcgtcgcgc acgagcgtcg tggggaagag tccgtcgatc gccgccccca gcttcccgcc
      241 tcggaccggc agcagggtca tgttcgacgt ggtcgtcatg gccggccgta cccaggcggg
      301 ccgcatgccg acgagcctca catcgtgtcc ggtcgcgcgc agctcacgag cgagcgcgcg
      361 cgcgaatgtc tcggacccgc cgacggtgga gagcagcttc ttcgcgatga cgacgcgcac
      421 gcgcgcagcc taggcgagcg cctcggccgc cgtgatgtgc gaactcgccg cgtgcgtgta
      481 cgcgtcttcg acgcggtcca tgacgcggtc ccagtcccag cgctcggcca acttcgcggc
      541 gcccgcccgt cccatgcgct ggcgaagccc ggcgtcgtcg aggagcgccg tgaccgccgc
      601 ggcgatgtcc tcgaccttct ggcgctcgac gaggccatcc gtgccgtgag tgatcacctc
      661 acggagcggc gggatgtcgc cgccgatcac cggcttctcg tggagccagg cctcgaggta
      721 gccgatgccg aacgtctcgt ggagcgacgg catcgcgtac agagcgcacg cgtcgagagc
      781 cgcggacttc tctgcgcccg acgccttctc gatcgcgacg atccgctcgt cggtgtagcg
      841 cgcgaactcg tcgaccatcg cgccgtagaa gccggggaca ccgatgaaca cgaaccgcgt
      901 gtctggatgc gtgcgccaca ccaggtccgc ggagtcgagc acatgaatga agcccttgta
      961 gcgctcgcgg cgtccgatga agaggacgat cggcgcgtcc gcggggatgc cgtgtcgcgc
     1021 gcggaagccg gcgccatcgc gcgagcgtga ggcgttcgga cccatgcccg tcatcacgac
     1081 tcggtatggg tcgatgccat gactcgcgta ccagccgcgc tcccactccg tcatcgtcgt
     1141 gatcgcgctc gcgcgccggt agcgctcgaa gtccgaggac gtgtcaccac cgtggaactg
     1201 tccggggtgc gcgagcggcg tgagcacgat gggtaggtcg agctcctcgg cgacacgaag
     1261 actcgagtcg aggtactcac gtccgacgtt gtggatcagg tcgcggtcct cggcgtatcg
     1321 cgccaactcg tcgacgcgca tgagatcgac gagcgtcgac gcgtcggcca ccatcccgag
     1381 aaggccaccc cgcggcttca cctgcacgac gtcgacgccg ttctcggtgt atcgcgcccg
     1441 gtcgtcgaac gcctggccgc acaccacacg cacgtcgtgg ccccgagcgg cgagccgcgt
     1501 cgcgaactgg taggtgaggc tctccgagcc acccatcgga gcgaacgttc gcttggtgaa
     1561 gaggatccgc atcgcgttgc tccattgcac ggcccctgcc ggaccgggcg cgaggacgag
     1621 acgacctagg aggcggcttc gtccagaccg atgaacttcg cccagctgcg ctcgccgcca
     1681 cgcacgtatg acgcgtacag atacgtaggg gtggcgggcg gacgcttggg catgcgcagc
     1741 agctgcatct tggactcggc aagcgtgcgc ccgcccttct tgtgattaca cgagcggcag
     1801 gccgccacga cattctccca ggtgtgctga ccgccgcggt gtcggggcat gacgtggtcg
     1861 agggtcaggt cattgccccg cttgccgcag tactggcagg tgtggtcgtc ccgctggagg
     1921 acctccttgc gggtgagctt caccaccggc cgcgggcgct tgacgtgata cgcaaggcgg
     1981 atgaccgacg gcgacgggaa cctgagtcgc tcgctggtca cgatgtggcc gttctgctcg
     2041 atgacggtcg ccttttcctt ggcaagcagc accacagcgc gccggacgtt gcacacgttc
     2101 agcggctgga agtccaggtt gagcactagg acattcgcgt cgatgaccgc catgttcaga
     2161 ttctagggtc cgcgcggtac gattgggtgt ctatggcgcc ctcccagaac ggttccaacg
     2221 gccacggacc caccggcaca tggaccctca agaccggtct cgcgcagatg ctcaaaggcg
     2281 gcgtgatcat ggacgtcgtc accgccgagc acgcgaagat cgctgaggat gccggtgcgg
     2341 tcgcggtgat ggcgctcgag cgcgttcccg ccgacattcg cgcgaccggc ggcgtcgcgc
     2401 gcatgagcga cccggaaaag atcctcgaga tc
//
LOCUS       DASSYW010000483         2551 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_318949, whole genome shotgun sequence.
ACCESSION   DASSYW010000483 DASSYW010000000
VERSION     DASSYW010000483.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2551)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2551)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2551
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_318949"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..833)
                     /locus_tag="VFN38_07785"
     CDS             complement(<1..833)
                     /locus_tag="VFN38_07785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HET9011703.1"
                     /translation="MRILTPFAMAFEGVGIALDALRSNKVRAGLTIMGVALGVFVVVA
                     MSSIVQGINESFRRDVEAAGPTSFFVYRRPIGGFNVCDGTDETCPERRNPAITMDEVA
                     TLERLPTIRAVTAHIGTGASFKYKDKVIPSAGMEVYTPNWTEIDGGDIYPGRSFTYAE
                     NATGAKVVLVNDKLAEQLFGQSDPIDKTIMIDDVQFKVIGFYHYTASPMGTPTSAGGG
                     DSPKAIVPFESARRHLNLWMRGNNLIVKPHTGVSTQEAVDDVIAALRAHRGLRARAPN
                     N"
     gene            complement(837..2075)
                     /locus_tag="VFN38_07790"
     CDS             complement(837..2075)
                     /locus_tag="VFN38_07790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HET9011704.1"
                     /translation="MPFHEAVRLALQQIRVQKLKSFFTLLGVMIGVMFLIAVVSIVTG
                     MGKYMEEDFAGRLLGANTFTLRRFPWFGNNVTQEQWMEWQRRPRVYHSDVDVVRNALP
                     SGTRYAVESSENLYASTPYARPRQIDAHAVEGDYFAIKKYDLSSGRIFTQQEAELGTP
                     VVVIGDEVAKYFFPGLTPIGRELRIGGIPYAVIGVIEHQGNLFGISLDKTAFAPFMSP
                     LHRLTNPRGDIDGLLVQAPNDIMMNEAMETTREVLRGHRRLRPGVEDNFVMETSASAL
                     ASFEKVKSVMTIAGTALPAIGLVVGGMVIMNIMLVAVAERTREIGIRKSLGARRKDIL
                     RQFLVESATLSTMRALLGIGLGILSAKVISWNTPLPAAVAPWSLVVATMLGLGVGVIS
                     GMYPARKAARLDPIDALRAE"
     gene            complement(2137..>2551)
                     /locus_tag="VFN38_07795"
     CDS             complement(2137..>2551)
                     /locus_tag="VFN38_07795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HET9011705.1"
                     /translation="FDVYNKIFGTFFLVMVVLSAVGLIVGGVGVIAIMMISVTERTRE
                     IGVRKALGATRGTILFQFLVEAVTMTGIGAIIGLVLGTLAALLIKHTTPVAASVPPLA
                     VVAALASSCVTGVLFGMLPAAKAAKLDPVAALRFE"
BASE COUNT          407 a          870 c          871 g          403 t
ORIGIN      
        1 aagttgttcg gcgcgcgcgc gcgcaggccg cggtgcgcgc gcagggcggc gatcacgtcg
       61 tccaccgcct cctgcgtgct gacgccggtg tgcggcttca cgatcaggtt gttgccgcgc
      121 atccagagat tgaggtgccg ccgcgccgac tcgaacggca cgatcgcctt gggcgagtcg
      181 ccgccccccg ccgacgtcgg ggtacccatc gggcttgccg tgtagtggta gaagccgatc
      241 accttgaact gcacgtcgtc gatcatgatc gtcttgtcga tcggatcgga ctggccgaac
      301 agctgctcgg cgagcttgtc gttcacgagc accaccttgg cgccggtggc gttctccgcg
      361 taggtgaagc tccgtccggg atagatgtcg ccgccgtcga tctcggtcca gttgggcgtg
      421 tacacctcca tgccggcgct cgggatgacc ttgtccttgt acttgaacga cgcgcccgtg
      481 ccgatgtgcg ccgtgacggc gcggatcgtc ggcaggcgct cgagcgtcgc cacctcgtcc
      541 atcgtgatcg ccggattgcg ccgctcgggg caggtctcgt cggtgccgtc gcatacgttg
      601 aagccgccga tcgggcgccg gtacacgaag aacgacgtcg gccccgccgc ttcgacgtcg
      661 cgacggaacg actcgttgat cccctgcacg atcgacgaca tggccacgac cacgaacacg
      721 ccgagggcga cgcccatgat ggtgaggccg gcgcggacct tgttggagcg cagcgcgtcg
      781 agcgcgatgc cgacgccctc gaacgccatc gcgaacggag tgagaatccg catggcctac
      841 tccgcgcgca gcgcgtcgat ggggtcgagg cgcgccgcct tgcgcgccgg atacatgccc
      901 gagatgacgc ccacgcccag gcccagcatc gtcgcgacga cgagcgacca gggcgccacg
      961 gcggccggca gcggtgtgtt ccacgagatg accttggcgc tcaggatccc gaggccgatg
     1021 ccgagcagtg cccgcatcgt gctgagggtg gcgctctcga cgaggaactg gcgcaggatg
     1081 tccttccgcc gcgccccgag ggacttccgg atgccgatct cgcgcgtccg ctccgcgacg
     1141 gccacgagca tgatgttcat gatcaccatg ccccccacga cgagcccgat ggcgggcagc
     1201 gcggtgccgg cgatcgtcat cacgctcttg accttctcga acgacgcgag cgcggacgcc
     1261 gacgtctcca tgacgaagtt gtcctcgacc cccgggcgca ggcgacggtg tccgcgcagc
     1321 acctcgcgcg tcgtctccat cgcctcgttc atcatgatgt cgttcggcgc ctgcacgagc
     1381 agcccgtcga tgtcgccgcg cgggttggtg aggcggtgca ggggcgacat gaacggcgcg
     1441 aacgccgtct tgtcgagcga gatcccgaac aggttgccct ggtgctcgat gacgccgatc
     1501 accgcgtacg ggatgccgcc gatgcgcagc tcgcggccga tcggggtgag ccccgggaag
     1561 aagtacttgg ccacctcgtc gccgatgacg acgaccgggg tgccgagctc cgcctcctgc
     1621 tgcgtgaaga tccggccgct cgacaggtcg tacttcttga tggcgaagta gtcgccctcc
     1681 acggcgtggg cgtcgatctg ccgaggccgg gcgtacggcg tgctcgcgta caggttctcc
     1741 gagctctcca cggcgtagcg ggtgccgctc ggcagggcgt tgcgcaccac gtccacatcc
     1801 gagtggtaca cgcgcgggcg ccgctgccac tccatccact gctcctgcgt cacgttgttc
     1861 ccgaaccagg ggaagcggcg gagcgtgaag gtgttcgccc cgaggagccg gccggcgaag
     1921 tcctcctcca tgtacttgcc catgccagtg acgatggaga cgacggcgat gaggaacatg
     1981 acgccgatca tgacgccgag cagcgtgaag aagctcttga gcttctgcac gcggatctgc
     2041 tggagcgcga gccggacggc ttcgtggaag ggcatgcggg ggggctggag gggggttccc
     2101 cgggcctacg acatgggcgg cgcgaaagtg tcagcgctac tcgaacctga gcgccgccac
     2161 cggatccagc ttggccgcct tggcggcggg cagcatgccg aacagcaccc ccgtcacgca
     2221 gctcgacgcg agggccgcca cgacggcgag ggggggcaca ctcgccgcga ccggggtcgt
     2281 gtgcttgatc agcagggcgg cgagcgtccc cagcaccagg ccgatgatcg cgccgatccc
     2341 ggtcatcgtc accgcctcca cgaggaactg gaacaggatg gtgccgcgcg tcgccccgag
     2401 cgccttccgg accccgatct cgcgggtccg ctcggtgacg gagatcatca tgatcgcgat
     2461 cacccccacg ccgcccacga tcaaccccac ggccgagaga acgaccatca cgaggaagaa
     2521 cgtgccgaag atcttgttgt agacgtcgaa c
//
LOCUS       DASSYW010000484         2242 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_115833, whole genome shotgun sequence.
ACCESSION   DASSYW010000484 DASSYW010000000
VERSION     DASSYW010000484.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2242)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2242)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2242
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_115833"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..209)
                     /locus_tag="VFN38_07800"
     CDS             complement(<1..209)
                     /locus_tag="VFN38_07800"
                     /inference="COORDINATES: protein motif:HMM:NF012789.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HET9011706.1"
                     /translation="MMDIATEDPLLDGLNPAQREAVLHVDGPLLVLAGAGSGKTRVLT
                     HRIAWLVQSDIARPGEILAITFTNKA"
     gene            complement(206..1348)
                     /locus_tag="VFN38_07805"
     CDS             complement(206..1348)
                     /locus_tag="VFN38_07805"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HET9011707.1"
                     /translation="MRRGAPELLVGLVLAILLASYVVYTQRVVRELRREALRSSRMYA
                     RVFRAQSDTSEGAGTQALFDLSKSIVEQGVPLIVTDSGGRPTAQANLPADVAADDAKV
                     RAYVRELDRQNAPVVDSLVGRIHYGNPPLVKWLRVIPGVQAVTAFVLLLAAVSIVRAR
                     GNAERERVLAGMARESAHQLGTPLSSLAGWIELLEEGATDARSRAAMEHMRGDLERLD
                     RVAHRFERIGRERRREQVDLHALVDRITSYFRARVPTLAHQVAIEVAAHTEPVSVVGD
                     PVLLEWALEVLVKNSVDALAGRGGRIAVSAQRRQGGGAMLTVADDGPGIPRDLRARIF
                     EPGFSTNQSGWGIGLSLARRIVEENHGGTLRLVSSDRGATFEIILP"
     gene            complement(1352..>2242)
                     /gene="serS"
                     /locus_tag="VFN38_07810"
     CDS             complement(1352..>2242)
                     /gene="serS"
                     /locus_tag="VFN38_07810"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004828 - serine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006434 - seryl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HET9011708.1"
                     /translation="WGEARPSAGVRPHWEIAGAQGLLDLERGAKISGSGFPVFRGAGA
                     RLVRALMSYFLDLHTGQHGYEEVWPPTLVNRASMTGTGQLPKFEDDAYRIADDDLFLI
                     PTAEVPVTNLYRDEILDGDTLPRGFTAYTPCFRREAGSAGKDTRGILRVHQFDKVELV
                     RYSAPEDSNAQLELMLGHAEAALRGLGLPYRVKLLAAGDTGFSSAKTYDLEAWAAGVG
                     AWLEVSSASCFTDFQARRANIRYRPAKGEKPRFVHTLNASALAFPRTIACILEHYQQP
                     DGSVVVPDVLRPYLGTDRLG"
BASE COUNT          323 a          779 c          836 g          304 t
ORIGIN      
        1 gccttgttcg tgaaggtgat ggccaggatc tcgccggggc gggcgatgtc ggactgcacg
       61 agccaggcga tgcggtgggt caggacgcgc gtcttgcccg agcccgcgcc cgcgagcacg
      121 agcagcgggc cgtccacgtg cagcacggcc tcgcgctgcg cgggattgag cccgtcgagc
      181 agcggatctt cagtcgcgat atccatcatg gcaagataat ctcgaacgtg gcgccgcggt
      241 cgctcgagac caggcgcagc gtgccgccgt ggttctcctc gacgatgcgg cgcgcgaggg
      301 agagcccgat cccccatccg ctctggttcg tggagaagcc gggctcgaag atgcgggccc
      361 gcaggtcgcg cggaatgccg ggcccgtcat cggcgacggt gagcatcgct cccccgccct
      421 gccggcgctg cgccgagacg gcgatgcgcc ccccccggcc ggccagggcg tccacggagt
      481 tcttgacgag cacctcgagg gcccactcga ggagcaccgg gtcgccgacg accgagacgg
      541 gctcggtatg agcggccacc tcgatggcca cctggtgcgc cagcgtcgga acgcgcgcgc
      601 ggaagtagct ggtgatgcga tccaccagcg cgtgcaggtc cacctgctcg cggcgccgct
      661 cgcgcccgat ccgctcgaag cgatgggcca cccggtcgag ccgctccaga tccccgcgca
      721 tgtgctccat cgcggcccgg ctccgggcgt cggtggcccc ctcctccagg agctcgatcc
      781 acccggcgag gctggagagg ggagttccga gctggtgcgc cgactcccgc gccatgccgg
      841 ccagcacccg ctcgcgctcg gcgttgccgc gggcgcgcac gatggacacc gcggcgagca
      901 ggaggacgaa ggcggtgacc gcctggaccc cggggatcac ccgcagccac ttcacgagcg
      961 gcggattgcc gtagtggatc cgccccacga gcgaatcgac cacgggggcg ttctgccggt
     1021 cgagctcgcg cacgtaggcg cgcaccttcg cgtcgtcggc ggcgacgtcg gcggggaggt
     1081 tcgcctgggc ggtgggacgc ccgccgctgt cggtgacgat gaggggaacc ccctgctcga
     1141 cgatgctctt ggagaggtcg aacagggcct gggtgccggc gccctcgctg gtgtcgctct
     1201 gcgcccggaa gacgcgggcg tacatccggc tggagcggag cgcctcgcgc cgcagctcgc
     1261 gcacgacgcg ctgggtatag accacgtacg acgcgagcag gatcgccagg acgaggccga
     1321 cgagcagctc gggagcgccg cggcgcatcg gtcagcccag ccggtcggta cccagatacg
     1381 gacgcagcac gtcggggacg acgacggagc cgtccggctg ctggtagtgc tcgagaatgc
     1441 aggcgatggt gcgcgggaag gcgagcgccg acgcgttcag cgtgtgcacg aagcgcggct
     1501 tctcgccctt ggccggccga tagcggatgt tggcgcgccg cgcctggaag tcggtgaagc
     1561 agctggccga gctgacctcc agccacgcac cgacgccggc ggcccacgcc tccaggtcgt
     1621 acgtcttggc gctggagaag ccggtgtcgc cggcggccag cagcttcacc cggtacggca
     1681 ggccgagtcc gcgcagcgcg gcctccgcgt ggccgagcat cagctccagc tgcgcgttgg
     1741 aatcctcggg cgcggagtag cggacgagct ccaccttgtc gaactggtgg acgcggagga
     1801 tgccgcgcgt gtccttgccc gccgaaccgg cttcgcgccg gaagcagggg gtgtacgcgg
     1861 tgaatccgcg cggcagggtg tcgccgtcga ggatctcgtc ccggtagagg ttcgtcaccg
     1921 ggacttccgc cgtcgggatg aggaagagat cgtcgtcggc gatccggtag gcgtcgtcct
     1981 cgaacttggg cagctggccg gtgcccgtca tgctcgcgcg attcaccagc gtgggcggcc
     2041 agacctcctc gtagccgtgc tggccggtgt gcaggtcgag aaagtagctc atcagcgcgc
     2101 ggacgagccg ggcgccggcg ccgcgaaaga cggggaaccc cgagccgctg atcttggcgc
     2161 cccgctcgag gtcgagcagg ccctgcgcgc cggcgatctc ccaatggggg cgcacgccgg
     2221 ccgacggccg cgcctcgccc ca
//
LOCUS       DASSYW010000485         2662 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1099212, whole genome shotgun sequence.
ACCESSION   DASSYW010000485 DASSYW010000000
VERSION     DASSYW010000485.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2662)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2662)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2662
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1099212"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(2..1057)
                     /locus_tag="VFN38_07815"
     CDS             complement(2..1057)
                     /locus_tag="VFN38_07815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="YbhN family protein"
                     /protein_id="HET9011709.1"
                     /translation="MCIAFPSRSRRPTSTAAGPPIDARLSRTGSVALRLALVALAAWA
                     LRRELAGVHPGELLRHFAGYGWRHAALALGGTAASFATLGVLERLAIRYASRRARVPG
                     GAALATSFVAHAFSQSVGLALLTGAAVRLRAYARFRLDAAAVARVSAFVTLSVTLGLL
                     ACGAVALLGTSQPLRVAGASLPGRPIGLALALLAAAYLAWSVIATRDVVGRGRWRLRR
                     PNPRVAFAQLALAAVDWLLTGTVLFALLPAGSGVGYGELLRAYLVAQTAGMASHIPGA
                     AGVLELAVLALVATGNEARRAPVIAALVMFRVVYYLLPLLLAMAVAAIGELARRRARM
                     RMPALVPAVAIPVRRVG"
     gene            complement(1142..2521)
                     /locus_tag="VFN38_07820"
     CDS             complement(1142..2521)
                     /locus_tag="VFN38_07820"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HET9011710.1"
                     /translation="MVARAPFHSVTSSLALGFALFAGACSSSDKAGAAADSATIAAAT
                     ANACPGDNAGLTLPAGFCATVFADSIVHGRHVAVASNGDVYITLEGTRPSPEKEIAGV
                     AKQEQAASVAALRDTNRDGRADIVARLAGRGNTGIALANGYLYVDEGTRIVRYARPDS
                     QLLPTAKPEVIVQGIPLDPGHRARNFAIGTDGSLYLNVGSATNSCQQKDRGNESPGID
                     PCTELRTRAGIWKFDANRTNQRFSPAARYATGIRNGMGIAFGPDGKLYATQHGRDQLN
                     ANWPKVFPTTKYSAENPAEELMQVNQGDDFGWPYCYYAVEPKKLVDAPEYGGDGQRSA
                     RCSDKKEPAAVFPGHWAPMSLLFYSGSSFPAKYKDGAFIAFHGSWNRAPEPQEGYRVV
                     FQPMSNGTASGNYETFANGFAGVTPAELQPGTAKHRPTGLATGPDGALYVTDDLGGRV
                     YRITHGGTK"
BASE COUNT          382 a          937 c          998 g          345 t
ORIGIN      
        1 ctcaaccgac acgtcgcacc gggatcgcca ccgcggggac gagcgcgggc attcgcatcc
       61 tggcccggcg ccgtgccagc tccccgatgg ccgcgaccgc catggccagc aggaggggca
      121 ggaggtagta gaccacgcgg aacatcacca gcgcggcgat gaccggcgct cgccgagcct
      181 cgttcccggt ggcgacgagc gcgaggaccg cgagctccag caccccggcg gcgccgggga
      241 tgtggctcgc catgcccgcc gtctgcgcca cgaggtaggc gcgcagcagc tcgccgtagc
      301 ccaccccgga gccggcgggc agcagggcga agagcacagt gccggtgagc agccagtcca
      361 cggcggcgag cgcgagctgc gcgaacgcca cgcgtgggtt cggccgccgg agccgccacc
      421 gtccgcggcc cacgacgtcg cgcgtcgcga tgacgctcca cgcgagatac gccgcggcga
      481 gcagggcgag cgcgagaccg atcggccggc cgggcagcga agcgccggcg acgcgcagcg
      541 gctggctggt gcccagcagc gcgacggcgc cgcacgcgag caggccgagg gtgaccgaca
      601 gggtgacgaa ggcgctcacg cgcgctaccg ccgcggcgtc cagccggaag cgcgcgtacg
      661 cgcgcagccg taccgccgcg ccggtgagca gcgccagccc gaccgactgg ctgaaggcgt
      721 gcgcgacgaa ggaggtggcc agcgcggcgc cccctggcac tcgcgcccgg cgactcgcgt
      781 agcggatcgc gagtcgctcg agcacgccga gcgtcgcgaa gctggccgcg gtgccgccga
      841 gtgcgagcgc ggcatgacgc cagccgtagc cggcgaaatg gcgcagcagc tcgcccggat
      901 gcaccccggc gagctcgcgt cgcagcgccc acgccgccag cgcgacgagt gcgaggcgca
      961 gcgcgaccga cccggtccgg gaaaggcgag cgtcgatggg cggaccggct gcggtggacg
     1021 tgggacggcg agagcgggag ggaaaggcaa tgcacatgcc atgtcccccc gaatggcgaa
     1081 ccggccacca ctgccccgga gcagtgatgg ccggctcgca cgcagcaccc acggggaagt
     1141 gctacttcgt tccgccgtgg gtgatgcggt acactcgtcc gcccaggtcg tcggtcacgt
     1201 acagcgcgcc gtccggaccg gtggcgagcc cggtgggccg atgcttcgcc gtgcccggct
     1261 ggagctcggc cggcgtcacg ccggcgaagc cgttggcgaa ggtctcgtag ttcccgctcg
     1321 ccgtgccgtt cgacatcggc tggaacacca cgcggtagcc ctcctgcggc tccggcgcgc
     1381 gattccacga gccatggaac gcgatgaacg cgccgtcctt gtacttcgcc gggaagctcg
     1441 agccgctgta gaacagaagc gacatcgggg cccaatgccc ggggaacacg gcggccggct
     1501 ccttcttgtc cgagcaccgg gccgaccgct gcccatcgcc gccgtactcc ggcgcgtcga
     1561 cgagcttctt cggctccacc gcgtaatagc agtatggcca gccgaagtca tcgccctggt
     1621 tcacctgcat cagctcctcg gccgggttct ccgcgctgta cttggtggtg gggaagacct
     1681 tgggccagtt ggcgttcagc tgatcgcgcc cgtgctgggt ggcgtacagc ttcccgtccg
     1741 gcccgaaggc gatgcccatg ccgttgcgga tgccggtggc gtagcgcgcg gccggggaga
     1801 agcgctggtt cgtcctgttc gcgtcgaact tccagatgcc ggcgcgggtc cggagctcgg
     1861 tgcagggatc gatgccgggc gactcgttgc cgcggtcctt ctgctggcag ctgttggtgg
     1921 ccgagccgac gttgaggtac agggagccgt cggtgccgat cgcgaagttg cgggcgcgat
     1981 ggccgggatc cagcgggatc ccctgcacga tgacttccgg cttcgccgtg ggcagcagct
     2041 gggagtcggg ccgcgcgtag cgcacgatgc gggtgccctc gtccacgtac aggtagccgt
     2101 tcgcgagcgc gatgcccgtg ttccccctgc cggccagccg cgccacgatg tcggcgcgtc
     2161 cgtcgcggtt ggtgtcgcgc agcgcggcca ccgaggcggc ctgctcctgc ttcgcgacgc
     2221 cggcgatctc cttctcgggc gaggggcggg ttccctcgag cgtgatgtac acgtcgccat
     2281 tggaggcgac ggcgacgtgg cggccgtgca cgatgctgtc ggcgaacacc gtggcgcaga
     2341 agccggcggg cagggtgagg ccggcgttgt cgcccgggca ggcgttggcg gtggcggcgg
     2401 cgatcgtcgc cgaatcggcg gcggcccccg ccttgtcgct gctgctgcag gcgccggcga
     2461 acagcgcgaa ccccagcgcg agcgaggacg tgacgctatg gaatggtgcg cgtgcgacca
     2521 cggacggttc tcctggtgag gtgcacggct tctggcggca agatctgcac cgcgcccgcc
     2581 gcgcgcacaa acgatgcact cggcacctcg ccgagggaac cgccggacgc gccggctggg
     2641 tccctcggcg ccaccaagca cg
//
LOCUS       DASSYW010000486         2379 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_761208, whole genome shotgun sequence.
ACCESSION   DASSYW010000486 DASSYW010000000
VERSION     DASSYW010000486.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2379)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2379)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2379
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_761208"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..275)
                     /locus_tag="VFN38_07825"
     CDS             complement(<1..275)
                     /locus_tag="VFN38_07825"
                     /inference="COORDINATES: protein motif:HMM:NF012899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011711.1"
                     /translation="MIVCKFGGTSVGDADAIARTASIIAGRRDRQPVVVVSALGGATN
                     QLLQIAEQAAKGQLIGALRAVEGLRDRHLTQTQRLLAGDAADEVSTEL"
     gene            complement(272..1345)
                     /gene="asd"
                     /locus_tag="VFN38_07830"
     CDS             complement(272..1345)
                     /gene="asd"
                     /locus_tag="VFN38_07830"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004073 - aspartate-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HET9011712.1"
                     /translation="MTPRAPASRIPVAVLGATGAVGQTFIRLLADHPWFQLAELAASE
                     RSAGKCYVDAARWIGDAMPEQVRGMTVLPCDPRQIRSPLVFSALDASVAGEVELAFAR
                     AGRLVLSNAKNFRMDDDVPLVIPEVNADHLALLEVQRAKRGWSGGIVTNANCASIMAV
                     MALAPLHEAFGISRLFVATMQAGSGAGYPGVPSLDILGNVIPFISGEEHKIETEICKM
                     LGRRTDTRIEAADIRISAHANRVAVENGHTVCLSVDFGTHVGADAALEALREWRGDAS
                     ARDLPSSPERALVVTDLADRPQPRRDVGAGRGMTVTVGRVREDPLFDVKLVAMGHNTI
                     RGAAGASVLNAELLVATGQAGTT"
     gene            complement(1342..>2379)
                     /locus_tag="VFN38_07835"
     CDS             complement(1342..>2379)
                     /locus_tag="VFN38_07835"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HET9011713.1"
                     /translation="LVFPSFRLTGYFPRMTDVVALAAELLALQSSTGSEGPAVDFVSR
                     WLVSRGWNVTTQEVSKGRANVWASRSGGGVTFSTHLDTVPPYLPPRLEGSRLYGRGAC
                     DAKGIAAAMMCAAERLSAAGEKRIDLLLVVGEEKGSDGARAANHLAATSRFLVNGEPT
                     ESKLASGAKGSQRVVVRTRGRAAHSAYAELGVSAIEPMLALLPTIKSLPLPIDPVLGE
                     TTVNIGTIRGGTEANIIPALCESELMFRLVSDVAPLREAVKRWADGKAELEWGSYIPA
                     QHFHTIPGFDVAPVAYTSDIPLLSRWGTPLLFGPGSIHVAHTTEEYIDVEELRGAVDA
                     YERIARTVLAA"
BASE COUNT          353 a          851 c          841 g          334 t
ORIGIN      
        1 agctcggtcg acacttcgtc ggccgcgtcg ccggcgagca ggcgctgcgt ctgggtgagg
       61 tgccgatcgc gcagcccttc caccgcccgc agcgcgccga tgagctgccc cttggccgcc
      121 tgctcggcga tctggaggag ctggttcgtc gccccgccca gcgcgctcac caccaccacc
      181 ggctgccgat cgcgccgtcc ggcgatgatc gacgccgttc gcgcgatcgc gtccgcgtcg
      241 ccgaccgacg taccgccgaa cttgcagacg atcacgtcgt gcctgcctga cccgtggcga
      301 cgagcagctc cgcgttcagc accgacgcgc cggcagcgcc gcgaatcgtg ttgtggccca
      361 tggccaccag cttcacgtcg aacaggggat cctctcgcac gcgaccgacg gtgaccgtca
      421 tgccccgccc cgcgccgacg tcgcgccgcg gctgggggcg gtcggcgagg tcggtcacga
      481 cgagcgcacg ctcgggcgag ctgggaagat cgcgcgcgct cgcgtcgcca cgccattcac
      541 gaagcgcctc gagcgcggcg tcggcgccca cgtgcgtgcc gaagtcgacg gagaggcaca
      601 ccgtgtgacc gttctccacc gcgacgcggt tcgcatgcgc gctgatgcgg atgtccgccg
      661 cttcgatccg ggtgtccgtg cggcggccga gcatcttgca gatctccgtc tcgatcttgt
      721 gctcctcgcc gctgatgaac gggatcacgt tgccgaggat gtccagcgac ggcacgccgg
      781 gatagccggc gccggagccc gcctgcatgg tggcgacgaa caaccggctg atgccgaacg
      841 cctcgtgcag gggcgccagc gccatgaccg ccatgatcga cgcgcagttg gcgttggtca
      901 cgatgccgcc gctccagccg cgcttcgcgc gctgcacctc gaggagcgcc agatgatcgg
      961 cgttcacctc gggaatgacg agcggcacgt cgtcgtccat gcggaagttc ttggcgttgc
     1021 tcagcacgag ccgccccgcc cgcgcgaacg cgagctccac ctcgccggcc accgaggcat
     1081 cgagcgcgga gaagacgagc ggcgaacgga tctgtcgcgg gtcgcagggg aggaccgtca
     1141 tcccccgcac ctgctcgggc atcgcgtcgc cgatccagcg cgccgcatcc acgtagcact
     1201 tccccgccga gcgctccgac gcggccagct cggcgagctg gaaccagggg tggtcggcga
     1261 gcagccggat gaaggtctgg ccgacggcgc ccgtcgcgcc gagcacggcg acggggatgc
     1321 ggctggccgg cgcgcgcggg gtcatgcggc gagcaccgtg cgcgcgatgc gctcgtaggc
     1381 gtccaccgcg ccgcgcagct cctcgacgtc gatgtactcc tccgtcgtgt gcgccacgtg
     1441 gatggatccg ggaccgaaca acagcggcgt gccccagcgg ctgagcagcg ggatgtccga
     1501 cgtatacgcc accggcgcca cgtcgaagcc ggggatcgtg tggaagtgct gcgcgggaat
     1561 gtacgagccc cactcgagct ccgccttgcc gtccgcccag cgcttcaccg cttcgcgcag
     1621 cggcgcgacg tcgctcacca ggcggaacat cagctcggat tcgcagagcg ccggaatgat
     1681 gttggcttcg gtgccgccgc gaatggtgcc gatgttcacc gtcgtctcgc cgagcacggg
     1741 atcgatgggg agaggcagcg acttgatcgt cgggagcagg gcgagcatcg gctcgatggc
     1801 cgaaacgccg agctccgcgt aggcggagtg ggcggcgcgg ccgcgggtgc gcacgaccac
     1861 gcgctgcgag cccttggcgc cggaggccag cttgctctcg gtcggctcgc cgttcaccag
     1921 gaagcggctc gtcgcggcga ggtggttcgc ggcgcgtgcg ccgtcggagc ccttctcctc
     1981 gccgaccacc agcagcaggt cgatccgctt ctcgccggcc gcgctgagtc gctccgccgc
     2041 gcacatcatc gcggcggcaa ttccctttgc gtcgcaggcc ccgcgaccgt agaggcgact
     2101 accctcgagc cgtggcggca gatagggcgg caccgtgtcg agatgcgtgg agaaggtcac
     2161 gcctccaccg gagcgcgacg cccagacgtt ggcgcggccc ttggagacct cctgcgtcgt
     2221 gacgttccag ccgcgcgaca ccagccagcg cgagacgaaa tccacggccg gcccctcgga
     2281 gccggtggac gattgcaagg cgagcagctc cgcagcgagc gcgacgacgt cggtcatgcg
     2341 cggaaagtag ccggtgagac ggaacgacgg gaagacgag
//
LOCUS       DASSYW010000487         3326 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_147947, whole genome shotgun sequence.
ACCESSION   DASSYW010000487 DASSYW010000000
VERSION     DASSYW010000487.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3326)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3326)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3326
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_147947"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..616
                     /locus_tag="VFN38_07840"
     CDS             <1..616
                     /locus_tag="VFN38_07840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011714.1"
                     /translation="LNSLFGLRHCGRRLKLREHASAYGQMGRCLSPCLGDLDPNLYRR
                     RLDEALSPFTGAGDRGEGLLEKIEEQMAEASRARHYERAAVLLRRRERMAGVLARLGG
                     LVQATHARSRLAVAPHPSKQRFDAFWIVAGRVVDWGPLPEADELRERTRAALELRPPP
                     HRPAVVSPEDVDEIRIVHTWLAAHDPPQLPLDDDAPAAVLDWLR"
     gene            781..3326
                     /gene="fdh"
                     /locus_tag="VFN38_07845"
                     /pseudo
     CDS             781..3326
                     /gene="fdh"
                     /locus_tag="VFN38_07845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012632235.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase"
BASE COUNT          534 a         1180 c         1181 g          431 t
ORIGIN      
        1 gctcaactcg ctgttcgggc tgcgccactg cggccgcagg ctcaagctgc gcgagcacgc
       61 gtccgcgtac ggccagatgg gccgctgcct ctcgccctgc ctcggcgacc tcgacccgaa
      121 cctctaccgc cgccggctcg acgaggcgct ctccccgttc accggcgcgg gcgaccgcgg
      181 cgaggggctg ctcgagaaga tcgaggagca gatggcggag gcgtcccgcg cgcggcacta
      241 cgagcgcgcc gccgtgctgc tgcgccggcg cgagcggatg gcgggcgtgc tcgcgcggct
      301 cggcgggctg gtgcaggcca cccacgcgcg ctcgcggctg gccgtggcgc cgcatccgtc
      361 gaagcagcgc ttcgacgcct tctggatcgt cgccgggcgc gtggtggact gggggccgct
      421 gcccgaggcg gacgagctgc gcgagcggac ccgcgcggcg ctcgagctgc ggccgccgcc
      481 gcaccggccc gccgtggtgt cgcccgagga cgtggacgag atccggatcg tgcacacctg
      541 gctcgccgcg cacgacccgc cgcagctgcc gctcgacgac gacgcgccgg ccgccgtgct
      601 cgactggctc agatagcggc gtactttcgc ggggaccctg gtagacaggc agcaatgcgc
      661 cccaagctgt tcgagcggat ccgcgagctg cccctggtgg ggcgcgtggc ggactggggg
      721 atgggcccgt cggcggtgtc gcgcaacacg aagcgcgccg gcagcaggat cgcggggctg
      781 aaggtgaccg agtcgatctg cccgtactgc gcggtgggct gcagccagct cgtgtacacg
      841 cgcgacggcg agctgatcga cgtggagggc aatccgcgct ccccgatcaa ccagggcacg
      901 ctctgcccga agggctcggc cacccgccag ctcgtccaac agcccggccg gctgacgaag
      961 gtgctctacc gccccccgcg cggcaccgag tgggaggaga tcccgctcga ccaggcgatg
     1021 gacatgatcg ccgagcgcgt ggtggccgcg cgcgagaacg gctggcagga ccgcgacagc
     1081 cgcggctggg gcgtcgatcg cacgatgggc ttcgcccacc tcggcggcgc gacgctcgac
     1141 aacgaggaga actacctgat caagaagctc ttcaccgcga tgggcgcggt gcaggtggag
     1201 aaccaggcgc gcatatgaca ctcctccacg gtgcccggtc tgggcacctc gctagggcgc
     1261 ggaggcgcca ccaacaccca gcaggacatg cagaactccg actgcatctg gatccagggc
     1321 tccgcgctca tggaggcgca tcccgtgggc gcgcgctggg cgctgaaggc gcgtgagcgc
     1381 ggcgcgaaga tcatccacgt ggacccgcac ttctcacgca cgagcgcgat ggcggacaag
     1441 cacgtgcaga tccgcgccgg caccgacatc gcgttcgtcg gcgggctgat ccgccacgtg
     1501 atcgagaccg agtcgtactt ccgcgactac gtcgtgaact acacgaacgc gggcacgatc
     1561 gtgggcgaga agttcgagga caccgaggac ctcgagggct tcttctccgg cttcgacccc
     1621 gagaccggcg agtacgaccg ctgcacgtgg atgtacgagg gcggcgaggt ggccgcgtcg
     1681 gccggcgtgc gcgagcactc cacgcaggcg ttctccgaga agaccggcgc ggggatgatg
     1741 accggcgcgg tgaagagcga cgagacgctc caggatccgc gctgcgtctt ccagctcctg
     1801 aagaagcatt actcgcgcta cacgcccgag atggtggagc ggatctgcgg cgtgccgcag
     1861 gacgacttcc tggaggtggc cgagacgctg atcgccaact cgggccgcga gcgcaccacg
     1921 atgctcgcgt acgcgctcgg ctggacgcag cacacctcgg gcgtgcagat gatccgcgcg
     1981 ggcgccgtgc tccagctgct gctcggcaac atcggccgcc ccggcggcgg catcatggcc
     2041 atgcgcgggc acgcctcgat ccagggctcc accgacatcc ccactctcta cgacctgctg
     2101 cccggctacc tcccgatgcc gcgcgcgagc gaggacgacc agacgctcga ggactacatc
     2161 gcgaagggcg gcgcgaaccg cggctggtgg tcgcacttcg acaagtacgt cgtgtcgctg
     2221 atgaaggcgt acttcggcga cgccgccacc gaggagaacg gctacgggtt ccagcacatc
     2281 ccgaagatca ccggcaacca ttcgcactac ccgaccatgc tgcgcgcgtt cgacggcgcg
     2341 ctcgacgggc tgttcgtgat gggccagaac cccgcggtgg ggtcgcagca cgccggcctc
     2401 cagcggcgcg cgctcgcgaa cctcaagtgg ctcgtggtgc gcgacctcgc cgacatcgag
     2461 acctcgcgct tctggctcga cggccccgag atccgcagcg gcgagctgcg caccgaggac
     2521 atcgagaccg aggtgttcct catgccggcc gcgagccacc tcgagaagga gggccacttc
     2581 acgaacaccc agcggctgct ccagtggcgc gacaaggcgc tcgacccgcc cggcgacgcc
     2641 cgctccgagc tgcacttcat gtaccacctc ggcaagcgcg tgaaggagca ctacgcgggc
     2701 tccgagcgcg agcgcgactg gccgatccgc aacctcgcgt gggactaccc cgagcacggg
     2761 ccgcacgccg agccgagcgc cgaggacgtg ctgcgcgaga tcaacggcta cgaggtggag
     2821 tcggggcgaa acctgtccgg cttcaccgag ctgaagaacg acggctccac cgcgtgcggc
     2881 tgctggatct actcgggctg cttcgccgac ggcgtgaacc agacgcgcag gcgcgacccg
     2941 ggcgacctcg actcggaggg cggctgggtg tcgcccgagt gggcgtgggc gtggcccgcc
     3001 aaccgccgca tcctctacaa ccgcgcgtcc gccgaccccg acggcaagcc ctggtcggag
     3061 cgcaagaagt acgtctggtg ggacgaggac gagggcaagt ggaccggcta cgacgtgccc
     3121 gacttcccgg tggacaagcg gcccgactac gccgcgcccg acgacgccga ggggatggac
     3181 gcgatctcgg gcgacgaccc gttcatcatg atgggcgacg ggcgcgcgtg gctctactcg
     3241 ccgagcggtc tgctcgacgg cccgatgccg acccactacg agccgctcga gtcgccggtc
     3301 gcgaacctgc tctatcccga ggtcgg
//
LOCUS       DASSYW010000488         2691 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_901263, whole genome shotgun sequence.
ACCESSION   DASSYW010000488 DASSYW010000000
VERSION     DASSYW010000488.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2691)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2691)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2691
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_901263"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..813
                     /locus_tag="VFN38_07850"
     CDS             <1..813
                     /locus_tag="VFN38_07850"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF013252.4"
                     /note="catalyzes the ATP-dependent formation of a
                     phosphodiester at the site of a single strand break in
                     duplex DNA; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA ligase"
                     /protein_id="HET9011715.1"
                     /translation="SLRGLGRGLVLDGELLAMDPANPRRARPFAALQRRLGRKSPTPA
                     MMAEVPAGFVAYDILAFSAVLVIERPWRERRGMLEALSWSEGASFVAPYALIGTESEI
                     EAAFDAARTGGNEGLIAKDPGSPYTPGRRGKSWIKLKRALATLDVVVTGVERGHGRRN
                     EVLSDYTFAVRASETDPTLLNVGKAYNGLTDLEIAELTERFRAITIEQFGRFHAVRPE
                     VVLEVAFDIVQKSARHKAGYALRFPRIVRVRDDKPPAEIDTLQRVRELAGDR"
     gene            complement(853..2541)
                     /locus_tag="VFN38_07855"
     CDS             complement(853..2541)
                     /locus_tag="VFN38_07855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011716.1"
                     /translation="MTARARNALHRPVFIGAVSIVTFVASLVALIVVPQQAKRAANAI
                     RPAAAARPDTIPTMSSLLVAERQVASADSAIVATRAELTALIAATAAVSATDTTVTGE
                     VISPAARSLRDTLTADIAELDRLLTRADNAPLLSSYRALAEAAPMRGDAQVKLLLGSL
                     VEIERERESYNAVGGVDPVFVALTARANELGRNIQALVAGRRSSMQRELATLSPPPSA
                     AASALAARPLPDTMSAIYRRDTARTVAAEVANRLARERAELQRLDAREERARELANVG
                     ASPAAMLAAALVFGAMLGFGVAFFDEVRRPRVADSYEIERATGVSVLGVIKPLPPSPE
                     RGRRAADRNGPPYLDPGADGHQLIYLTIATAGTDVVMLTVVGDNPAVSAIVAINFAAI
                     AAQEARATLLVDTEAEDTVETALRLPASPGVMGLIEGKVSWPEAIRPARTGRDRTIDV
                     VSSGHGVLPLEELKELFQRDIARLSRRYDAVVLVSAIDQVSMGLPTALPIPDVVFCAR
                     TGQTPVAELKKALEEIAMAGCRVRGVVLWDAPDPALLEQQPSAAQEQRQPATVG"
BASE COUNT          366 a          932 c         1005 g          388 t
ORIGIN      
        1 tcgctgcgcg gcctcggccg cgggctggtg ctcgacggcg agctcctcgc gatggatccg
       61 gcgaaccctc gacgcgcccg tccattcgcc gcgctgcagc gccggctcgg tcggaagtcg
      121 cctaccccgg cgatgatggc cgaggtgccg gcgggcttcg tggcgtacga catcctcgcg
      181 ttcagcgccg tgctggtgat cgagcgtccg tggcgggaac ggcgcggcat gctggaagcg
      241 ctgtcatgga gcgagggcgc gtcgttcgtc gctccctatg cgctgatcgg cacggagtcg
      301 gagatcgagg ccgcgttcga tgcggcgcgg acggggggta acgaggggct catcgcgaag
      361 gaccccggtt cgccctacac gcccgggcgg cgggggaaga gctggatcaa gctcaagcgc
      421 gccctcgcca cgctcgacgt cgtggtcacc ggggtggaga gggggcacgg gcgccgaaac
      481 gaggtgctct ccgactacac cttcgccgtg cgcgcctccg agaccgatcc caccctgctg
      541 aacgtgggga aggcgtacaa cggcctcacc gacctggaga tcgccgagct gaccgagcgc
      601 ttcagggcga tcaccatcga gcagttcggc cgctttcacg cggtccgtcc cgaggtcgtg
      661 ctcgaggtcg ccttcgacat cgtgcagaag tcggcacgcc acaaggcggg ttacgccctg
      721 cgctttccgc gcatcgtacg tgtccgcgac gacaagccgc ccgcggagat cgacacgctg
      781 cagcgggtgc gcgagctcgc gggcgaccgc taggcggtcg cggcccgcgc ggccaaccgg
      841 gtggcgtacc ggtcagccca cggtcgccgg ctggcgctgc tcctgcgccg cggagggctg
      901 ctgctcgagc agtgcggggt cgggagcgtc ccagagaacg acaccgcgta cccggcagcc
      961 ggccatcgcg atctcctcga gcgccttctt gagctccgct accggcgtct gtccggtgcg
     1021 ggcacagaac accacgtcgg gtatcgggag agcggtgggc agccccatgc tcacctggtc
     1081 gatggcgctc accagcacca ccgcgtcgta gcggcgcgac aagcgggcga tgtcccgctg
     1141 gaacagctcc ttcagctcct ccaggggcag cactccgtgg ccgctcgaca cgacgtcgat
     1201 cgtccggtcc cggccggtgc gcgcggggcg gatcgcttcc ggccagctca cctttccttc
     1261 gatcagcccc atgacgcccg ggcttgccgg gaggcgcagc gccgtctcca ccgtgtcttc
     1321 cgcctcggtg tccacgagca gggtggcacg cgcctcctgc gcggcgatgg cggcgaagtt
     1381 gatcgccacg atcgccgaga cggcggggtt gtcgcccacc accgtgagca tcaccacgtc
     1441 ggtgccggcc gtggcgatgg tcagatagat cagctgatgg ccgtcggctc ccgggtcgag
     1501 atagggcggt ccattgcgat cggcggcgcg ccgaccacgc tccggtgaag ggggcagggg
     1561 cttgatcact cccagcacac tgacgccggt ggcgcgctcg atctcgtagg agtcggccac
     1621 tcgcggccgt cgcacttcgt cgaagaaggc gacgccgaag ccgagcatgg cgccgaacac
     1681 cagtgcagcg gcgagcatgg cggcgggcga agcgcccacg ttcgccagct cccgcgcgcg
     1741 ctcctcgcgc gcgtccagcc gctggagctc ggcccgctcg cgcgcgagcc ggttggccac
     1801 ctccgccgcg acggtgcgtg cggtgtcgcg gcggtagatc gccgacatcg tgtcgggcag
     1861 cggtcgcgcc gcgagcgccg acgccgccgc cgagggggga ggcgacagcg tcgcgagctc
     1921 gcgctgcatg gagctccgcc gcccggcgac gagtgcctgg atgttgcgtc cgagctcgtt
     1981 ggcgcgcgcc gtgagggcga cgaacacggg atccaccccg cccaccgcgt tgtagctctc
     2041 acgctcgcgc tcgatctcca ccagtgagcc gagcagcagc ttcacctgtg cgtcgccgcg
     2101 catcggtgcg gcctccgcca gcgcccggta cgaggagagc aggggcgcgt tgtcggctcg
     2161 cgtgagcagt cgatcgagct cggcgatgtc ggcggtgagc gtgtcgcgaa ggctgcgcgc
     2221 cgcgggactg atcacttcgc cggtgacggt ggtatcggtg gcggacaccg cggcggtcgc
     2281 ggcgatgagt gcggtgagct ccgcccgcgt cgccacgatc gccgaatcgg cggaagcgac
     2341 ctgtcgctcg gccacgagca gcgagctcat ggtcggaatg gtgtcggggc gtgcggcggc
     2401 ggccgggcgg atggcgttcg ccgcgcgctt cgcctgctgc ggcaccacga tcagcgcgac
     2461 gagcgacgcc acgaaggtga cgatgctgac ggcgccgatg aacacggggc gatgcagcgc
     2521 gttgcgggcg cgcgcggtca tccacgcggc gcgagaaggc gacggcgggc tggcacgctt
     2581 gcgggcgggg cggcggcgcg gactcatggt gcctgtggtg cgtgactcgg ggtgacgacc
     2641 cttcgggccg ggtgctggcg ctccccccta gcgcacgtga tgggccacgg c
//
LOCUS       DASSYW010000489         2410 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1594562, whole genome shotgun sequence.
ACCESSION   DASSYW010000489 DASSYW010000000
VERSION     DASSYW010000489.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2410)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2410)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2410
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1594562"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..313)
                     /locus_tag="VFN38_07860"
     CDS             complement(<1..313)
                     /locus_tag="VFN38_07860"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HET9011717.1"
                     /translation="MAMAGPPFDILLVEDNPADVRLTQEAFRDARVPNRLHVARDGVE
                     ALSMLRDATGAVPRPDLILLDLNLPRKDGREVLQDIKQDEALRHIPVVILSTSQSEHD
                     VA"
     gene            complement(320..1447)
                     /locus_tag="VFN38_07865"
     CDS             complement(320..1447)
                     /locus_tag="VFN38_07865"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HET9011718.1"
                     /translation="MGWGRSRDAAPGVDPEPKSPASTERLFRLVVESSPSGVVMVDRR
                     GVIVLVNRETERLFGYTREELIGQSIELLVPRRFRHSHPDMRQGFLADPQARAMGAGR
                     DLFGVHKDGSEIPVEIGLNPIEVEEGLFVMASVIDIAPRKQVEAELRRSNEELERFAY
                     VVSHDLQEPLRTVSSYVQLLSNRYHDRLDADAVDFIDFAVGGARRMQQLIADLLTFSR
                     VGTRGAPLEPTGMQAVYENALASLRAALDESKATVTADPLPTVVADAGQLAQLLTNLL
                     GNALKFRGDRPPHVHVGATRAGRMWTITVQDNGIGIAPEYFERIFVIFQRLHSREEYP
                     GTGVGLAICKRIVERHGGRIWVESTSAQGARFSFTLPAVAE"
     gene            complement(1395..>2410)
                     /locus_tag="VFN38_07870"
     CDS             complement(1395..>2410)
                     /locus_tag="VFN38_07870"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HET9011719.1"
                     /translation="VGSGPRMIGATAAWQRAVEQATLAARSDARVLLIGESGTGKELV
                     ARALYRTGPRRQQPFVVVNCSAVVEALFESELFGHVKGSYTGATETTPGLFELADGGT
                     IFLDEVGELPLTVQAKLLRVLETGDVQRVGATAPRRVDVHVLAATNRDLLAEVAAKRF
                     RSDLYYRINVVELTVPPLRDRREDIPYLVAAFVRDAASRLRKPLLGLTPAAERQLMAR
                     AWDGNVRELRNTIERACILAEGGWVTERELKQSGSRLPSVAASVPIPSPAAGHGFADG
                     DDVKLSARERDHIRQVLERSGGNKMAAARALGLDRRTLYRRLDRYGLGSIARRGARRG
                     SGA"
BASE COUNT          345 a          851 c          843 g          371 t
ORIGIN      
        1 gggcgacgtc gtgctcggac tgcgacgtgc tgaggatcac gacggggatg tggcgcagcg
       61 cctcgtcctg cttgatgtcc tgcagcacct cgcgcccgtc ctttcgcggc aggttgaggt
      121 ccagcaggat caggtcgggg cgtggcacgg cgccggtggc gtctctcaac atgctgagcg
      181 cctcgacgcc gtcgcgcgcc acatgaagcc ggttcggcac gcgcgcgtcc ctgaaggcct
      241 cctgggtgag tcggacgtcc gccgggttgt cctcgacgag caggatgtcg aagggggggc
      301 cggccattgc catgtcatct cactccgcca ccgccggcag ggtaaacgaa aaccgggcgc
      361 cctgcgcgga tgtcgactcg acccagatgc ggcccccgtg acgctcgacg attcgcttgc
      421 agatggccag ccccacgccg gtgcccgggt attcctcccg ggagtgcagc cgctggaaga
      481 tgacgaagat gcgctcgaag tactcgggcg cgatgccgat gccgttgtcc tgcacggtga
      541 tcgtccacat ccggccggca cgcgtcgcgc ccacgtggac gtgcggcggc cggtcgccac
      601 ggaacttgag ggcattgccc aggaggttcg tgaggagctg cgccagctgg ccggcgtccg
      661 cgaccacggt gggcagcgga tcggccgtga cggtggcctt cgactcgtcc agcgccgcgc
      721 gcaggctggc cagcgcgttt tcgtagacgg cctgcatgcc ggtgggctcg agtggcgccc
      781 cgcgggtgcc gacgcgtgag aaggtcagca ggtccgcgat cagctgctgc atccgccggg
      841 cgccgccgac ggcgaagtcg atgaagtcca ccgcatcggc gtccaggcgg tcgtgatacc
      901 ggttcgacag cagctgcacg tagctcgaca cggtgcgcag cggctcttgc agatcgtgcg
      961 agaccacgta ggcgaagcgc tcgagctctt cgttcgagcg gcgcagttcc gcctcgacct
     1021 gcttccgcgg ggcgatgtcg atcaccgacg ccatcacgaa gagcccttcc tcgacctcga
     1081 tcgggttgag gccgatctcg acggggatct cgctgccgtc cttgtgcacc ccgaacaggt
     1141 ctcgcccggc gcccatggcg cgtgcctggg gatcggcgag gaacccttgc cgcatgtcgg
     1201 ggtgactgtg ccggaaccgg cggggcacca gcagctcgat cgactgtccg atgagttcct
     1261 cgcgcgtgta gccgaagagc cgttcggtct cgcggttcac cagcacgatg acgccgcggc
     1321 gatccaccat caccacgccg ctcggcgagg actccaccac gagccggaac agccgctcgg
     1381 tggacgctgg gcttttaggc tccggatcca cgcctggcgc cgcgtctcgc gatcgacccc
     1441 agcccatatc gatccaaccg gcggtagagg gtgcgccggt cgagccccaa cgcgcgggcg
     1501 gcggccatct tgttcccgcc ggatcgctcg agcacctggc ggatgtggtc gcgctcgcgc
     1561 gccgagagct tcacgtcgtc gccatcggcg aatccatggc cagccgcggg ggacggaatc
     1621 ggcacgctgg cggccaccga cgggaggcgc gacccgctct gtttcagctc gcgctcggtc
     1681 acccagccac cctcggccag gatgcacgcc cgctcgatcg tgttccgcag ctcgcggacg
     1741 ttgccgtccc aggcgcgcgc catcagctgg cgctccgcgg ccggcgtgag gccgagcagc
     1801 ggtttgcgca gccgggaggc ggcgtcccgc acgaacgcgg cgaccagata cggaatgtcc
     1861 tcacgcctgt cccgcagcgg cggcacggtg agctccacca cgttgatgcg gtagtagagg
     1921 tcgctccgga agcgctttgc ggccacctcc gccagcagat cgcggttggt ggcggcgagc
     1981 acgtgcacgt ccactcgccg cggcgcggtg gcgccgacgc gttgcacgtc gccggtctcg
     2041 agcacgcgga ggagcttggc ctgcaccgtg agcggcagct cgcccacttc gtcgaggaag
     2101 atcgtgccgc cgtcggccag ctcgaacagg ccgggcgtgg tttccgtggc gccggtgtac
     2161 gaccctttga cgtggccgaa aagctcgctc tcgaacagcg cttccacgac cgcggagcag
     2221 ttgacgacga cgaacggctg ctggcgccgc gggcccgtgc ggtagagtgc gcgcgcgacg
     2281 agctccttgc ccgtgcccga ttcgccgatc agcagcacgc gcgcgtccga ccgggccgcg
     2341 agcgtggcct gctccaccgc ccgctgccac gccgccgtcg ccccgatcat ccgggggccg
     2401 ctgcccacca
//
LOCUS       DASSYW010000490         2535 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1808221, whole genome shotgun sequence.
ACCESSION   DASSYW010000490 DASSYW010000000
VERSION     DASSYW010000490.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2535)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2535)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2535
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1808221"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            167..1624
                     /locus_tag="VFN38_07875"
     CDS             167..1624
                     /locus_tag="VFN38_07875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011720.1"
                     /translation="MFEDQRPDTGTGTRDAAARRRERWLRIAAALVPVAATATAWFVN
                     HWTDAIPRGDIVQITHSRAFEGQPSLAPDGRAIAYRCDARGNGDICVASIDGRDVVNL
                     TADSPQDESEPAFSPDATTIAFRTGRSGIAVIARAGGPITRITPTGQNPAWTPDGRAL
                     VYADETVPGRDFMGGITEGWRVDLDSKARRRIAASDFHQPAVSPAGRRIAFWGRASMP
                     QNRRRLTSTRGDLWTVAVDGGAPQRVTFSPAVESSPMWSHDGRFLYYVANVNGSSAIW
                     RIRIDERSGRTTGAPEIVPTPYSQPLFLTRSADGRRVAWSDARPVNRIMRVAFDADAR
                     RTRGTPTEITPGGPEWEDSEVEVELQVAAPADPQAGAPPAGGEFPGHWSGDRRMFAGT
                     SNGAVWIYSAETRSYAQLRTGEHPVWLLDNRRVLFASAGALYMGDAVLRISREILSIP
                     DHQLDMPWLSRDNRFLYFAGNGLDANVWVMTVTNQ"
     gene            1697..2089
                     /locus_tag="VFN38_07880"
     CDS             1697..2089
                     /locus_tag="VFN38_07880"
                     /inference="COORDINATES: protein motif:HMM:NF019491.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Dabb family protein"
                     /protein_id="HET9011721.1"
                     /translation="MLNSVVKAALVVLLAGPLAFPAMAFASQNQKKPVRHIVVFKYKA
                     GTTPEQIAEVTTAFRALAKTIPGITGFEDGVNNSPEKRNLGFTHVYMVTFEDATARDA
                     YLPHAEHKKFGQLLGKLGVVEDVFVVDF"
     gene            2146..2331
                     /locus_tag="VFN38_07885"
     CDS             2146..2331
                     /locus_tag="VFN38_07885"
                     /inference="COORDINATES: protein motif:HMM:NF021758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rdx family protein"
                     /protein_id="HET9011722.1"
                     /translation="MPRASSLGARISSELGIEPVLVRGERGVFDVFVGDKVIFSKHAE
                     GRFPREDEVLESIRALR"
     gene            2355..>2535
                     /locus_tag="VFN38_07890"
     CDS             2355..>2535
                     /locus_tag="VFN38_07890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011723.1"
                     /translation="MRPDILGVCAVAGAVAVAQPLAQAQRPAASASRAAGPAAKPAMA
                     AMMDAADPALFRGLRY"
BASE COUNT          404 a          873 c          876 g          382 t
ORIGIN      
        1 gggaagactt gcggcgcaac cgcgagaacg gctgggcact cttcgggctg cagcaggcgc
       61 tcgagcgcca gggcaaggcc gacgaggcgg cggttgcgaa ggcacggttc gcgaaagcgt
      121 ggtcccgcgc cgacatcacc ctgacgtcgt cgcgtttctg acggccgtgt tcgaggacca
      181 gcggccggac acgggcacgg gcacgcggga cgccgccgcg cggcggcgtg agcgatggct
      241 gcgcatcgcg gcggcgctcg tgccggttgc ggccaccgcc actgcctggt tcgtcaacca
      301 ctggaccgat gcgatcccgc gcggcgacat cgtgcagatc acgcactcgc gcgcgttcga
      361 agggcagccg tcgctggcgc cggacggccg cgcgatcgcg tatcgctgcg atgccagggg
      421 caacggcgat atctgcgtcg cctccatcga cggccgcgac gtcgtcaatc tcactgccga
      481 ctcgccgcag gatgaaagcg agcccgcctt ttcgcccgac gctacgacga tcgcgttccg
      541 caccggccgg agcggcatcg cggtcatcgc ccgtgccgga ggccccatta cccgcatcac
      601 gccgaccggc cagaacccgg cctggacgcc ggacggccgg gcgctcgtct acgccgacga
      661 aaccgtgccg ggacgcgact tcatgggcgg catcacggaa ggctggcgcg tcgacctcga
      721 ctcgaaagcg cgccggcgca tcgccgccag cgatttccat caaccggcgg tctcgcccgc
      781 cggcaggcgc atcgcgttct ggggacgcgc gtcgatgccg cagaaccggc ggcggctgac
      841 gagcacccgc ggcgacctgt ggacggtcgc ggtggacggc ggcgcgccgc agcgggtcac
      901 gttcagcccg gccgtcgaat ccagtccgat gtggtcgcac gacgggcgct tcctctacta
      961 cgtggcgaac gtcaacggct cctcggcgat ctggcgcatt cgcatcgacg agcggagcgg
     1021 ccggacgacg ggcgcgccgg agatcgtgcc gacgccgtat tcgcagccgc tctttctcac
     1081 gcgctccgcc gacggccgcc gcgtcgcctg gtcggacgca cggccggtga accggatcat
     1141 gcgcgtggcc ttcgacgccg acgcacgccg gacgcgcggg acgccgacag agatcacccc
     1201 gggcggtccc gaatgggagg acagcgaggt cgaggtcgaa ctgcaggtgg cggcgccggc
     1261 cgacccgcag gcgggtgcgc cgcctgcggg cggcgagttc cccgggcact ggtccggcga
     1321 ccgcaggatg ttcgccggca catcgaacgg cgccgtctgg atctattcag ccgagacccg
     1381 atcgtacgca cagctgcgga ccggcgagca tcccgtctgg ctgctcgaca atcgccgcgt
     1441 gctgttcgcg tcggccggcg cgctctacat gggcgacgcg gtcctgagga tctcgcgtga
     1501 aatcctctcc atccccgatc atcagctcga catgccgtgg ctgtcccgcg acaaccggtt
     1561 cctgtatttc gccggcaacg ggctggacgc caacgtgtgg gtaatgacgg tcacgaacca
     1621 gtagccgagc gcacccgacg atgaccgggt gcggtcgatt acaatggccg cggacgttcg
     1681 tcgattcgga ggacacatgc tcaacagcgt cgtcaaagcc gcgctcgtcg ttctgctcgc
     1741 cggtccgctg gcattccccg cgatggcctt cgcctcacag aatcagaaaa agccggttcg
     1801 tcacatcgtc gtcttcaaat acaaagcggg gaccaccccc gagcagatcg cggaggtgac
     1861 gacggccttt cgtgcgctgg ccaagacaat ccccggcatc accggcttcg aggacggcgt
     1921 caacaacagt cccgagaagc ggaaccttgg cttcacgcac gtgtacatgg tgaccttcga
     1981 ggacgccacg gcgcgcgacg cctatctgcc gcacgcggag cacaagaagt tcggccagct
     2041 gctcggcaag ctcggcgtcg tcgaggacgt gttcgtggtc gacttctgat tgaggaggac
     2101 ggactcgtga ccgtcacgat caagtactgc gtgcgttgaa actacctgcc tcgcgcctcc
     2161 agtctggggg ccaggatctc gagcgagctc ggcatcgagc ccgtgctcgt gcgcggcgag
     2221 cgcggcgtgt tcgacgtgtt cgtcggcgat aaggtgatct tctcgaagca cgcggagggg
     2281 cggttcccga gagaggacga agtcctcgag tcgatccggg ccctccgctg atcccaacgt
     2341 tggagcagta acagatgcga cccgacattc tgggagtgtg tgccgtggcc ggcgcggtgg
     2401 cggtggcgca gccgttggcg caggcgcagc ggccggccgc gtccgcctct cgtgcagccg
     2461 gtcccgcggc gaagccggcg atggccgcca tgatggacgc tgccgatccg gcgctcttca
     2521 ggggcctccg ctacc
//
LOCUS       DASSYW010000491         2140 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1321204, whole genome shotgun sequence.
ACCESSION   DASSYW010000491 DASSYW010000000
VERSION     DASSYW010000491.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2140)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2140)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2140
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1321204"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1422)
                     /locus_tag="VFN38_07895"
     CDS             complement(<1..1422)
                     /locus_tag="VFN38_07895"
                     /inference="COORDINATES: protein motif:HMM:NF024491.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine/phosphatidylglycerophosphate/
                     cardiolipin synthase family protein"
                     /protein_id="HET9011724.1"
                     /translation="MSSEARPLPRPLVAAASVDRAEWLIDNADAYAALVSAIRHAHDF
                     IWISQLALDADCEAYGVGSADGTTTIVGELLAASRRGVAVRVLLNASLLLDTAKPLRA
                     HLEKAGADARRFRVRGVSRFPQLLHAKLVLVDAEVALLIGSPFANGYWDDARHAPVDH
                     RRPMRELAGRPVHDVSTRITGPSVATFSATFAALWNDAEDTIDGDEEDLVVAGHPTAL
                     TDSPMRIVRTAPGHGPMEILPALLEGIAGAEWLVYIEHQYLSARPVVDALVQALARRR
                     TLEVVVLLNQNPDVTAYRGWQNARLRESGLLEHPRVGLFTLWTSAVEAGRQRRQLNQV
                     FVHSKVVAIDDRWLLVGSANLDGVSLHSYGDDFSSRLGRRIFRGVRNFDVGAIIDVED
                     GGDALEQVRSLRARLWKEHLGGSFHEIGARPREGWLPLWRSVARRNAAELGKGRRAHF
                     LDGPFILPYSTRSTPRAQLADVGV"
     gene            complement(1412..>2140)
                     /locus_tag="VFN38_07900"
     CDS             complement(1412..>2140)
                     /locus_tag="VFN38_07900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011725.1"
                     /translation="TTAFVANAFSQSIGLALLTGAAVRVRAYARRGVDTAAVARISAF
                     VTLTVTLGLLACGAIAFLASRAPLRVLRVTLPVHPLGLVLGLTVLAYLSWSLLAVRDQ
                     VGRGRWQLRRPRPRAALAQLLLASADWLLTGTVLFAVLPSSMGLEYAALLRAYLVAQT
                     AGMMSHVPGGAGVFEAVMLTMLATGAATQRAGLVAALVMFRVVYYLLPLLVALGVAAV
                     AELRPRRARRIAPPTLTRELAHVE"
BASE COUNT          348 a          752 c          764 g          276 t
ORIGIN      
        1 cacgcccacg tcggcgagct gggcgcgcgg cgtcgagcgc gtgctgtacg gcaggatgaa
       61 cggaccgtcg agaaagtgcg cacgacgtcc cttgccgagc tcggcggcgt tgcggcgcgc
      121 aacggagcgc cacagcggca accagccctc cctcggtcgc gcgccgatct cgtggaagga
      181 gccgcccaga tgctccttcc agagccgcgc gcggagcgaa cgcacctgtt cgagcgcgtc
      241 gccgccatcc tcgacgtcga tgatcgcgcc gacgtcgaag ttgcggacgc cgcggaagat
      301 ccgccggccg agccggctgg agaaatcgtc gccgtaggag tgcagcgaca ctccgtccag
      361 gttcgcgctg ccgacgagca gccagcggtc gtcgatcgcg acgaccttgc tgtgcacgaa
      421 gacctggttg agctgacgac gttgacggcc tgcttccacc gccgacgtcc acagcgtgaa
      481 gagccccacc cgcgggtgct cgagcagccc cgattcgcgc agccgcgcgt tctgccatcc
      541 gcggtacgcc gtgacgtccg ggttctggtt caggagcacc accacttcga gcgtgcgacg
      601 gcgcgcgagg gcctgcacga gcgcatcgac gacgggacgc gcgctcaggt actgatgctc
      661 gatgtagacg agccactccg cgccggcgat cccttcgagc agtgcaggga gaatctccat
      721 cgggccgtgg cccggcgccg tgcgcacgat gcgcatcggc gaatcggtca gcgccgtcgg
      781 atgcccggcc accacgagat cctcctcgtc gccatcgatc gtgtcttccg cgtcattcca
      841 cagcgcggcg aatgtcgcgc tgaacgttgc caccgaaggc cccgtgatcc gggtggagac
      901 gtcgtgcacc ggccgcccgg cgagctcgcg catcgggcgc ctgtggtcga cgggcgcgtg
      961 gcgggcgtcg tcccagtagc cgttcgcgaa tggcgagccg atgagcagcg caacctcggc
     1021 atcgacgagc accagcttcg catggagcag ttgcgggaag cggctcacac cgcggacgcg
     1081 gaaacgccgg gcgtcggcac ccgccttttc gagatgggcg cgcagcggct tcgccgtgtc
     1141 gagcagcagg ctcgcgttga gcagcacgcg cacggcgact ccgcgccggc tcgccgccag
     1201 cagttcgccg acgatcgtcg tggtgccgtc cgcgcttccg acgccgtacg cctcgcagtc
     1261 cgcatcgagt gcgagctgcg agatccagat gaaatcgtgc gcatggcgga tcgccgacac
     1321 gagcgccgcg tacgcgtcgg cgttgtcgat cagccattcg gcgcgatcga ccgacgccgc
     1381 tgcgacgagc ggtcgtggaa gcggcctcgc ctcactcgac atgcgcgagc tcccgtgtca
     1441 gcgtcggcgg cgcgatgcga cgggcacgtc tcggccgcaa ctcggcgacg gcggccacgc
     1501 cgagcgcgac gagtagcgga aggagatagt agacgacccg gaacatcacg agcgcggcga
     1561 cgagcccggc acgttgcgtg gcggcacccg tggcgagcat ggtcagcatc accgcctcga
     1621 acactccggc gccgcccggc acgtggctca tcatgccggc ggtctgggcc acgagatacg
     1681 cgcggagcag cgccgcgtat tcgaggccca tgctggacgg cagcacggcg aacagcacgg
     1741 tgcccgtgag cagccaatcg gccgaggcga ggagcagttg cgccagcgcg gcgcgcggcc
     1801 gggggcgacg aagctgccag cgcccccggc cgacctggtc gcggaccgcc agcagactcc
     1861 aggacaggta cgcgagcacg gtcagcccga gcacgagtcc cagtgggtgc acgggaagcg
     1921 tgacgcgaag gacccgcagc ggcgcccggc tcgcgaggaa ggcgatcgcg ccgcaggcga
     1981 gcagtccgag cgtcaccgtg agcgtgacga aggcgctgat ccgcgcgacc gctgcggtat
     2041 cgactccgcg ccgcgcgtag gcccgcacgc gcacggcggc gcccgtgagc agtgcgaggc
     2101 cgatcgactg gctgaaggcg ttcgcgacga acgccgtcgt
//
LOCUS       DASSYW010000492         3251 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1735279, whole genome shotgun sequence.
ACCESSION   DASSYW010000492 DASSYW010000000
VERSION     DASSYW010000492.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3251)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3251)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3251
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1735279"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..300
                     /locus_tag="VFN38_07905"
     CDS             <1..300
                     /locus_tag="VFN38_07905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011726.1"
                     /translation="GAGGEWYLLLTGDKENNRRFIVKATPGGIHYAGSWRVTGEKDNR
                     FSPDEFSIERMDAPGRQAVLERLRPALAGTGWEKKIGGGKAGDAGGARSTGKSEE"
     gene            425..1453
                     /gene="tdh"
                     /locus_tag="VFN38_07910"
     CDS             425..1453
                     /gene="tdh"
                     /locus_tag="VFN38_07910"
                     /EC_number="1.1.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008743 - L-threonine 3-dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006567 - threonine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonine 3-dehydrogenase"
                     /protein_id="HET9011727.1"
                     /translation="MRALLKATTGPGFVLRDVPRPQIRDDEVLIQVRRAGVCGTDVHI
                     YDWDAWAQGRCRPPFTVGHEFAGDVVEVGRLVTDVKEGDRVTAEGHIVCGRCHLCRTG
                     NAHVCPNTRIIGVDRDGCFADFIAMPATNVWHLDDAVSFEIGGIHDPMGNAFHTALTN
                     TEVPGSTVLVTGCGPIGIFAVGICKAAGASRIIASDVNQTRLALAKTMGAHDTVTPAE
                     AEQAVRTATSGLGVDVVLEMSGVPSAIHQAFALVRVGGRVQMLGIPAKPMEVNFATEI
                     IFKGITVYGVVGRRMYDTWIQMTQFLRSGQFDPSPVITHRFPLERFDDAIAAIKGGEA
                     GKVVFEIA"
     gene            1689..2777
                     /locus_tag="VFN38_07915"
                     /pseudo
     CDS             1689..2777
                     /locus_tag="VFN38_07915"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0008890 - glycine C-acetyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycine C-acetyltransferase"
     gene            complement(2785..3105)
                     /locus_tag="VFN38_07920"
     CDS             complement(2785..3105)
                     /locus_tag="VFN38_07920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011728.1"
                     /translation="MSSILPDAPHFETPVYGTVFAERAAVVRRLKEGDQLILVPDPPG
                     VDDPSVWVHAPGGDVVGHLSPDINAWMAPRMLGGARYGARVRSVGEPDTASWKRLVIA
                     VRRV"
BASE COUNT          514 a         1071 c         1202 g          464 t
ORIGIN      
        1 ggtgcgggag gggagtggta cctcctcctc accggcgaca aggagaacaa ccgccggttc
       61 atcgtcaagg cgacgcccgg cggcattcac tacgccggct cgtggcgggt gacgggcgag
      121 aaggacaatc gcttctctcc cgacgagttc tcgatcgagc ggatggacgc gcccggccgc
      181 caggcggtgc tcgagcgcct ccggcccgcg ctcgccggca ccggctggga gaagaagatc
      241 ggcggtggaa aggcgggcga tgccggcggc gcgaggtcga cgggaaagtc ggaggagtga
      301 gcgggcggtt ccctcgagcg cgctcgatcc ggacttccat cgcgcgagac gacccgcgag
      361 gtttcggcac gccgcgcggg cgatgcggcg ttcgagtcca cttcaagcag agagcgaggc
      421 gcctgtgaga gcgctgttga aggctacgac cggtcccggc ttcgtcctac gcgacgtgcc
      481 gcgaccgcag atccgggacg acgaggtcct catccaggtg cgccgcgcgg gggtgtgcgg
      541 caccgacgtc cacatctacg actgggatgc ctgggcgcag ggccgatgcc gcccgccgtt
      601 caccgtgggg cacgagttcg ccggcgacgt ggtggaagtc gggcgcctcg tcaccgacgt
      661 gaaagagggg gaccgcgtga cggcggaggg ccacatcgtc tgcgggcgct gccacctctg
      721 ccgcaccggg aacgcccacg tctgccccaa cacgaggatc atcggggtgg accgcgacgg
      781 ctgcttcgcc gacttcatcg cgatgccggc gaccaacgtg tggcacctcg acgacgcggt
      841 gtcgttcgag atcggcggca tccacgaccc gatgggcaac gcgttccaca cggcgctgac
      901 gaacaccgag gtcccaggct cgacggtact ggtgaccggg tgcgggccga tcgggatctt
      961 cgcggtcggg atctgcaagg ccgcgggcgc gtcgcggatc atcgcgagcg acgtcaacca
     1021 gacgcggctc gcgctggcga agacgatggg ggcgcacgac acggtgacgc cggccgaggc
     1081 cgagcaggcg gtgcggacgg cgacgagcgg gctgggtgtg gacgtcgtgc tggagatgtc
     1141 gggcgtgccg agcgcgatcc accaggcgtt cgcgctcgtg cgggtcggcg ggcgcgtgca
     1201 gatgctgggc atcccggcga agccgatgga ggtgaacttc gccacggaga tcatcttcaa
     1261 ggggatcacc gtctacggcg tggtcggccg ccggatgtac gacacctgga tccagatgac
     1321 ccagttcctg cgctccgggc agttcgaccc gtcaccggtg atcacccacc gattcccgct
     1381 ggagcggttc gacgacgcca tcgccgccat caagggggga gaggcgggca aggtggtgtt
     1441 cgagatagcg tgaaggcggc aaggcgatag gctggtttgg cggtaaggcg gtaaggcagg
     1501 cagacggtca gcagcggact gccgaccgct caaccgcccg actgccgagc ggttccacac
     1561 attcatcgac catgacactc aattccaact tcaccgccgg cctggaagcg aagctgcagc
     1621 agctgcggga cgagaaggtg tacaagcggc tcaactacct cgattcgccg cagggcgcgc
     1681 gggtgcggat ggaggggcgc ggcgaggtgc tcatcctgtc gtcgaacaac tacctcggcc
     1741 tgtccaacga gcgggcggtg gtggaggcgg ggatcgaggg gctcgagcgc ttcggtgccg
     1801 gcaccggcag cgtgcgcttc atctgcggca ccttcaccgt gcaccgggac ctcgaggagg
     1861 cgctggcgcg cttcgtcggc accgaggcgt cgatgtcgta cgtgtcggcc tggaacgcca
     1921 atgaaggact gacggcgacg gtggtcgagg agggtgactt cgtcgtgtcc gacgcgctga
     1981 accacgcgtc gatcatcgac tcgatccgcc tggcgaaggc gatcacgaag tgccagacgg
     2041 cggtgtacaa gcacgccgat ctcgacgacc tgcgggccaa gctcgcggcg gcgcgcggcg
     2101 ccaagcggcg gctcgtctgg agcgacggga tcttctccat ggaagggtcg atcgcccctc
     2161 tccccgacct cctccagatc tgccgcgacc acgatgccgt gctgatcatc gacgattcgc
     2221 acgcgacggg ggtgctgggg aagacgggcc gcggcgtcgc ggagcacttc ggcgtgctgg
     2281 gcgaggtgga catcatcacg tagaccctcg gcaaggcgct gggcggcgcg gcgggcggat
     2341 tcgtcgccgg ctcgtcggcg ctctgcgact acctcacgca gcggtcgcgc ccgcagctgt
     2401 tctccaacgc gctccccccc accgtggcgg cgagcgcgct ggcggcggtg gagttcatcg
     2461 aggcgacgcc gcagcgcgtc gagaccctgc gcgagaacgc ccgctacttc cgcgagcgga
     2521 tcatcgaggc gggcttcgca cccctggccg gggagacgcc gatcatcccc atcatcgtcg
     2581 gcgagacttc ggcggcgatc cagatgagcg acatgctgct ggacgagggg gtgttcgtga
     2641 ccggcttcgg ctttccggtg gtgccgcagg gccaggcgcg gatccggtgc cagatctcgg
     2701 cggcccacac gcgggccgat ctggacgagg cggtggcggc gttcatcaag gtgggcaagc
     2761 ggctgaagct gatctgaccc gcggtcagac gcggcgcacg gcgatcacca gccgcttcca
     2821 gctcgcagtg tccggctcgc cgacgctgcg cacccgcgcg ccatagcgcg cgccgccgag
     2881 catgcgcggc gccatccacg cattgatgtc gggtgacagg tgtcccacca cgtcgccgcc
     2941 cggcgcgtgc acccagacgc tggggtcgtc cacccccggc gggtcgggga cgaggatgag
     3001 ctgatcgccc tccttgagcc ggcgtaccac cgccgcccgc tcggcgaaga cggtgccgta
     3061 gaccggcgtc tcgaagtgtg gcgcatcggg caggatggac gacatgggcg ccctccctgg
     3121 gtcgcggtgg aagccgggcg tcggccgcgg ggcgaggcgg ccgacgccgc taccatacgc
     3181 accggacgtt ccagaggcca ctgccggtcc gtgacgccgg gcccggcctc ttcgtcccca
     3241 gcatgagccc g
//
LOCUS       DASSYW010000493         2404 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_629605, whole genome shotgun sequence.
ACCESSION   DASSYW010000493 DASSYW010000000
VERSION     DASSYW010000493.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2404)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2404)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2404
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_629605"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1866)
                     /locus_tag="VFN38_07925"
     CDS             complement(<1..1866)
                     /locus_tag="VFN38_07925"
                     /EC_number="1.1.1.40"
                     /inference="COORDINATES: protein motif:HMM:NF015882.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004470 - malic enzyme activity [Evidence
                     IEA];
                     GO_function: GO:0004471 - malate dehydrogenase
                     (decarboxylating) (NAD+) activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent malic enzyme"
                     /protein_id="HET9011729.1"
                     /translation="MTKRDDALDYHARGRPGKIAVVPTKPLNNQRDLALAYSPGVAEP
                     CLEIQKNPEDVYKYTAKGNLVAVVTNGTAALGLGNIGALAGKPVMEGKANLFKQFSDL
                     DVFDLEVGSENPDDVIKFCQLLEPTVGGINLEDIKAPECFYIEETLRRTMGIPVFHDD
                     QHGTAIISGAALLNALEISGKDISKVRVVFSGAGAAAISTAEHYVRLGVKREHILMCD
                     RAGVIHDGRPEGDLDPYKARFVRKTSARTIADALVGADVFVGLSAAGAVTRDMVAQMA
                     NRPIIFALANPVPEITPEEVRSVRDDAIIATGRSDYPNQVNNVLGFPFIFRGALDVRA
                     TEINEEMKMAATRALATLAKQDVPDSVAALYGLRNVHFGPEYLIPFPFDPRVLLWVAP
                     AVAWAAVASGVAREFIDLEGYRDRLEVRLGRARGIMRGLINRAQRAPKRIVFPEGEEP
                     KIMRAASILVDDGIALPILLGNRERIEQLAEQHRIPLDEIAIEDPATSERREDYAHYM
                     WQLRKRKGLSLDEARRQLFNGNYFGSCMVARGDADALLSGVTMHYPETIRPALQVIGS
                     HPSAKLVSGMYMMVTERHVVFCADTTVNINPTAEQVAQIAYAASRITRTMGIVPRI"
     gene            complement(2110..>2404)
                     /locus_tag="VFN38_07930"
     CDS             complement(2110..>2404)
                     /locus_tag="VFN38_07930"
                     /inference="COORDINATES: protein motif:HMM:NF013143.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HET9011730.1"
                     /translation="FWNLFLYFTLGLVIAFAMQFAGVILVFNFLVLPAVTGLLLARSM
                     TGIFSVAVLSAVIAAVVGFSLSVPFDLPSGPAIITCSAALALLAWPTRLMQRR"
BASE COUNT          344 a          807 c          887 g          366 t
ORIGIN      
        1 gatgcgcggc acgatcccca tcgtgcgggt gatccggctc gccgcgtagg cgatctgggc
       61 cacctgttcg gcggtggggt tgatgttcac cgtggtgtcg gcgcagaaga cgacgtggcg
      121 ctcggtgacc atcatgtaca tgccgctcac gagcttggcg ctcgggtgcg agccgatgac
      181 ctggagggcg gggcggatcg tctccgggta gtgcatcgtc acgccggaga ggagggcgtc
      241 ggcgtcgccg cgcgccacca tgcacgagcc gaagtagttg ccgttgaaca gctgccggcg
      301 cgcctcgtcg agcgagaggc ccttccgctt gcggagctgc cacatgtagt gggcgtagtc
      361 ctcgcggcgc tccgacgtgg ccgggtcctc gatcgcgatc tcgtccagcg ggatccggtg
      421 ctgctcggcg agctgctcga tccgctcgcg gttgccgagc aggatgggca gggcgatgcc
      481 gtcgtcgacg aggatcgacg ccgcgcgcat gatcttcggc tcctccccct cggggaagac
      541 gatccgcttg ggggcgcgct gggcgcggtt gatgaggccg cgcatgatgc cgcgggcccg
      601 gccgaggcgc acctccagcc ggtcgcggta gccctcgagg tcgatgaact cgcgcgccac
      661 gccgctcgcc accgccgccc acgccaccgc gggggccacc cagaggagga cgcgcggatc
      721 gaacgggaag gggatcaggt actcgggccc gaagtgcacg ttgcggaggc cgtacagcgc
      781 cgccaccgaa tcgggcacgt cctgcttggc cagcgtcgcg agggcgcgcg tcgccgccat
      841 cttcatctcc tcgttgatct ccgtggcgcg cacgtcgagc gcgccccgga agatgaacgg
      901 gaagccgagg acgttgttga cctggttggg gtagtcgctg cgcccggtgg cgatgatcgc
      961 gtcgtcgcgc accgagcgca cctcctccgg cgtgatctcg gggacgggat tggcgagcgc
     1021 gaagatgatc gggcggttcg ccatctgcgc caccatgtcg cgcgtcacgg cgccggcggc
     1081 ggacaggccg acgaagacgt cggcgccgac gagggcgtcg gcgatggtgc gggcgctggt
     1141 cttccggacg aaccgcgcct tgtacggatc gaggtcgccc tccgggcgcc cgtcgtgaat
     1201 cacgccggcg cggtcgcaca tcaggatgtg ctcgcgcttg acgccgaggc gcacgtagtg
     1261 ctcggcggtg ctgatcgccg cggcgccggc gccggagaac acgacgcgca ccttggagat
     1321 gtccttgccc gagatctcca gcgcgttgag cagcgcggcg cccgagatga tcgccgtgcc
     1381 gtgctggtca tcgtggaaga cgggaatgcc catcgtccgg cgcagcgtct cctcgatgta
     1441 gaagcactcc ggcgccttga tgtcctcgag gttgatcccg cccaccgtcg gctcgagcag
     1501 ctggcagaac ttgatcacgt cgtccggatt ctcggagccc acctcgaggt cgaacacgtc
     1561 gaggtcggag aactgcttga acaggttcgc cttgccctcc atcaccggct tgccggcgag
     1621 cgcgccgatg ttgcccagcc ccagcgccgc ggtgccgttc gtgacgaccg cgacgaggtt
     1681 ccccttcgcc gtgtacttgt acacgtcctc ggggttcttc tggatctcga ggcagggctc
     1741 ggcgaccccc ggcgagtagg cgagggcgag gtcccgctgg ttgttgagcg gcttcgtggg
     1801 gacgacggcg atcttgccgg gccgtccgcg cgcgtgatag tcgagggcgt cgtcgcgttt
     1861 tgtcatgggc agacccgaaa ggtatcgcgg cgcctcgcgg atcgggactg ccggccggtg
     1921 cggatccggc cgatccgccc gccggtgaca tggcggggcc cgcggccgcg gcccgtgccg
     1981 aagtcgcagg tccggacgcg ggaggggccg gcccccggtc cggaggccgg ccccgcgcgg
     2041 tgcgatccgc gtcgacccgg tgtgcgccgc ggtgcggctt cgcgtcgcgc gccgcgccgt
     2101 tccgcgacgc tatcgccgct gcatcaggcg ggtcggccag gccaggagcg ccagcgccgc
     2161 ggagcaggtg atgatcgccg gtccggaggg caggtcgaac ggcaccgaca gcgagaaccc
     2221 cacgaccgcc gcgatgacgg cgctcaggac ggcgacgctg aagatccccg tcatgctgcg
     2281 cgccagcagc agccccgtca ccgccgggag gacgaggaag ttgaacacga ggatcacccc
     2341 ggcgaactgc atcgcgaacg cgatcaccag cccgagcgtg aagtagagga acaggttcca
     2401 gaac
//
LOCUS       DASSYW010000494         2326 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1192197, whole genome shotgun sequence.
ACCESSION   DASSYW010000494 DASSYW010000000
VERSION     DASSYW010000494.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2326)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2326)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2326
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1192197"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            162..1304
                     /locus_tag="VFN38_07935"
     CDS             162..1304
                     /locus_tag="VFN38_07935"
                     /inference="COORDINATES: protein motif:HMM:NF028011.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate cyclase regulatory domain-containing
                     protein"
                     /protein_id="HET9011731.1"
                     /translation="MSDTEEFESAGLLAGIDDPDKREQRLELLRHLRDDGFTIEELQE
                     AASSERLALLPVDRVLSTKGAKYTSADLAEESGISLDLLQQLWRALGFTEIDPSEKVF
                     GDADLEAVRSVAQFHAAGIDDEPLTLISQVIGSGMSRLSDAIRETVGEALLQPGDTEL
                     TVGTRYAAAIEHLVPLLTPVLGYVLTVHMKEQVKSNFIAQTEIDSGQFDNSRDITVCF
                     ADLVGFTRLGERVPPRELSDAARRLSDMALDVARSPVRLVKTIGDAAMLVSPEPEPMV
                     RAALELAARAEENEDVMPQLRVGLASGPAVPQSGDWFGPPVNLASRVSDIARPASVLV
                     TKPVRDALKDEFHWSFAGARKLKGVRDEVPLYRARPKTEEDEADDG"
     gene            1301..1540
                     /locus_tag="VFN38_07940"
     CDS             1301..1540
                     /locus_tag="VFN38_07940"
                     /inference="COORDINATES: protein motif:HMM:NF013691.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HET9011732.1"
                     /translation="MSAFVYLLRCADGSLYCGWSTDPERRLRQHQRGVASRYTSRRLP
                     VELVWTRECEDRSDALRQEAAIKRMPVAAKRALVG"
     gene            complement(1537..1725)
                     /locus_tag="VFN38_07945"
     CDS             complement(1537..1725)
                     /locus_tag="VFN38_07945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011733.1"
                     /translation="MKLRLEKALAQQSKCVESYKQSMGTPAERLEHVRLEAANLQVAL
                     CDRANRMFQHAPGRRAAR"
     gene            complement(1777..2235)
                     /locus_tag="VFN38_07950"
     CDS             complement(1777..2235)
                     /locus_tag="VFN38_07950"
                     /inference="COORDINATES: protein motif:HMM:NF021538.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2269 family protein"
                     /protein_id="HET9011734.1"
                     /translation="MDDFDTWLIAIHIFAAVIWVGGSFYVQLLAIRTKRTAPPAELAS
                     FAKNIEFLGTRTFIPASLILVIAGITLVSRDLFTLEGWVVFGLVVWALSFLSGAFFLG
                     PQSGKFGEELAERGPQPEVMARLDRLFLVSRVELTLLILVVFDMALKPGT"
BASE COUNT          387 a          767 c          868 g          304 t
ORIGIN      
        1 cggccagctg cgcgccacgc gcaactggat gcggatcggc cgcgagtggt ggttcgccga
       61 cgagccccag acggagctgg gccggcagga gtgggcctac ttcgagtcga agggcgagaa
      121 gcgggtgcga aagttcacgg cgcgcacgga gtagtggggc gatgagcgac acagaagagt
      181 tcgagtccgc gggactgctc gccggcatcg acgacccgga caagcgtgag cagcggctgg
      241 agctgctgag gcatctccgc gacgacggct tcacgatcga ggagctgcag gaggccgcga
      301 gcagcgagcg gctggcgctg ctcccggtgg accgcgtgct cagcaccaag ggcgcgaagt
      361 acacgagcgc cgatctcgcc gaggagtccg ggatctcgct ggacctgctc cagcagctct
      421 ggcgcgcgct cggcttcacc gagatcgacc cgagcgagaa ggtgttcggc gacgcggacc
      481 tcgaggcggt ccgctcggtc gcgcagttcc acgcggcggg tatcgacgac gagcccctca
      541 ctctgatcag ccaggtgatc gggagcggca tgtcgcggct cagcgacgcg atccgcgaga
      601 ccgtcgggga ggcgctgctc cagcccggcg acaccgagct caccgtgggc acgcgctacg
      661 ccgcggccat cgagcacctc gtgcccctgc tcacccccgt cctcggctac gtgctcacgg
      721 ttcacatgaa ggagcaggtg aagtcgaact tcatcgccca gaccgagatc gactcgggcc
      781 agttcgacaa ctcgcgcgac atcaccgtct gcttcgcgga cctggtgggc ttcacgcggc
      841 tcggggagcg ggtcccgcca cgcgagctga gcgacgccgc tcgccggctg agcgacatgg
      901 cgctggacgt ggcgcgcagt ccggtgcggc tcgtgaagac gatcggcgac gcggcgatgc
      961 tcgtctcgcc cgagcccgag ccgatggtgc gcgcggcgct cgagctggcg gcgcgcgcgg
     1021 aggagaacga agacgtgatg ccgcagctgc gcgtgggctt ggccagcggg cccgccgtgc
     1081 cgcagagcgg cgactggttc ggaccgcccg tgaacctcgc gagccgggtg agcgacatcg
     1141 cccggccggc gagcgtgctg gtgacgaagc cggtgcgcga cgcgctgaag gacgagttcc
     1201 actggtcgtt cgccggcgcg cgcaagctca agggagtgag ggacgaggtg ccgctctacc
     1261 gcgcgcgccc gaagaccgag gaggacgagg cggacgacgg atgagcgcgt tcgtctacct
     1321 gctgcgctgc gccgacggct cgctgtactg cggctggtcc accgaccccg agcgccgcct
     1381 tcgccagcac cagcggggag tggcgagccg ctacacgagc aggcggctgc cggtggagct
     1441 cgtctggacg cgcgagtgcg aggaccgctc cgacgcgctg cgccaggaag cggcgatcaa
     1501 gcggatgccg gtggccgcga agcgcgcgct ggtgggctag cgggcggcgc gccgcccggg
     1561 cgcgtgctgg aacatccggt tggcgcggtc gcacagcgcc acctgaaggt tggcggcctc
     1621 gaggcggacg tgctcgagcc gctcggccgg agtgcccatc gactgcttgt agctctccac
     1681 gcacttcgac tgctgggcga gcgccttctc cagtcgcagc ttcatcgtct ccggccccat
     1741 cgcgggcggg acattacgcg gaagcggcgg cgggcgctag gtgcccggct tcagcgccat
     1801 gtcgaagacg acgaggatca gcagcgtgag ctcgacccgc gagacgagga agagccggtc
     1861 gagccgcgcc atcacctccg gctgtggtcc gcgctccgcg agctcctccc cgaacttgcc
     1921 cgactggggc ccgaggaaga acgcgccgct gagaaacgag agcgcccaga cgaccaatcc
     1981 gaagaccacc cagccctcga gcgtgaagag gtcgcgtgac acgagcgtga tgccggcgat
     2041 aacgaggatc agcgaggctg gaatgaacgt gcgtgtgccc agaaactcga tgttcttggc
     2101 gaacgacgcg agctcagcgg gcggcgcggt gcgcttcgtc cggatagcca gcagctgcac
     2161 gtaaaacgaa ccgccgaccc agatgacggc ggcgaagatg tggatggcga tgagccatgt
     2221 gtcgaagtcg tccatgtgcg gtttctaacc gcggcgccgg acggtccggc ggccggggca
     2281 gccgcggcgg ggagggaggg agaagccccc gccgcggcca cgaatc
//
LOCUS       DASSYW010000495         2289 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_137214, whole genome shotgun sequence.
ACCESSION   DASSYW010000495 DASSYW010000000
VERSION     DASSYW010000495.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2289)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2289)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2289
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_137214"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1210)
                     /locus_tag="VFN38_07955"
     CDS             complement(<1..1210)
                     /locus_tag="VFN38_07955"
                     /inference="COORDINATES: protein motif:HMM:NF022773.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3131 domain-containing protein"
                     /protein_id="HET9011735.1"
                     /translation="MTLSRSLSRWPALAVLFVTLTAASSRCPADAPGAAPAGTGSGGR
                     DGSVARAQGTAVSIPTPPPSAPVTVSPEEQRDFMRQSARSAWNFVARSMSPGAGFVGA
                     TDTYPYMTVWDMASTLASIHSARQLGLITRPQYERAMHRSFSTIEKMPLYDKAAFNKL
                     YASNTGAMVDRRNARSEKGYGWSVLDHGRLLTWLKIVAANDTAYASRAQAIVARLDMN
                     RLVREGYLQGEDLNPADGRSRRYQEGRIGYEQYAAEGFALWGARAERALDFAANAKPV
                     MVYDQTVLADTRGDDLLTSEPFVMMGLELGWTSPTWRSLSLAVLAAQEARYKQTGIVT
                     MVSEDAIPDPPAYFYYYLLYHNGKPFVVTTPGGDIASSYPRWVSAKAAFGYHALAPSD
                     YTWKALQTVKW"
     gene            1496..2212
                     /locus_tag="VFN38_07960"
     CDS             1496..2212
                     /locus_tag="VFN38_07960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011736.1"
                     /translation="MANRTSTLALAALLAAVASLPAAAQSLATYGSAEVAGYGEGSLF
                     LGSTLGLPGGRGLSPFVSAYVQTYRYRNGLNSHATATAFAPAVGLSDGMPTGSVSGSL
                     GYNFTSTDVSNTPIVGLQGGNTGSLFSTLQANYWGDGNRAAQAIVSYAYRSQYVWSRL
                     RAAQRVGASPWFAGGEVVYQGTSHRYNQHRYQVGPTIEYRFTPSFRMGGAAGYKGGDN
                     NYPGTGYAQLNFLVLTDLGK"
BASE COUNT          349 a          775 c          795 g          370 t
ORIGIN      
        1 cccacttcac cgtctgcagc gccttccacg tgtagtcgct cggggccagc gcgtggtagc
       61 cgaacgcggc cttcgcgctc acccagcggg gatagctgga cgcgatgtcc ccgcccggcg
      121 tggtgacgac gaacggcttg ccgttgtggt agagcaggta gtagtagaag taggccggcg
      181 ggtcggggat cgcatcctcg ctcaccatcg tgacgatgcc ggtctgcttg tagcgcgcct
      241 cctgcgccgc gagcacggcc agcgagagcg agcgccacgt ggggctggtc cacccgagct
      301 cgagccccat catgacgaag ggctcgctgg tgagcaggtc gtcgccgcgg gtgtcggcga
      361 gcacggtctg gtcgtagacc atcaccggct tcgcgttcgc cgcgaagtcc agcgcacgct
      421 cggcgcgcgc cccccacagc gcgaacccct cggcggcgta ctgctcgtag ccgatgcgtc
      481 cttcctgata ccgccggctc cggccgtcgg cggggttcag gtcttcgccc tgcaggtagc
      541 cctcgcgcac gagccgattc atgtcgaggc gggccacgat ggcctgggcg cgggacgcat
      601 aggcggtgtc gttcgcggcg acgatcttca gccaggtcaa cagccggccg tggtcgagca
      661 ccgaccagcc gtaccccttc tcgctccgcg cgttgcggcg atccaccatc gcgccggtgt
      721 tcgacgcgta cagcttgttg aacgccgcct tgtcgtacag cggcatcttc tcgatggtgg
      781 agaaggagcg atgcatggcg cgctcgtact gcggccgggt gatgagcccg agctgccggg
      841 cggagtggat cgaggcgagg gtgctcgcca tgtcccacac cgtcatgtac gggtaggtgt
      901 cggtcgcgcc gacgaagccg gcgccgggcg acatgctgcg cgcgacgaag ttccacgccg
      961 agcgtgcgga ctgtcgcatg aagtcgcgct gctcttccgg gctcaccgtg acgggagcgg
     1021 aggggggcgg ggtggggatg gacacggccg tcccctgcgc gcgtgcgacg ctgccgtcgc
     1081 gtccgcctga gcccgtgccg gcgggtgccg ctccaggcgc atccgcgggg catcggctgc
     1141 tcgccgcggt gagcgtgacg aacagcaccg cgagcgcggg ccaacgtgac agggaccgtg
     1201 acagcgtcat cagggagatg cgaaggggaa tggacggttg cgtcgcgggg gcgcgaccgg
     1261 gagggtgatt agcaaatgat gcaccgcagc accggtgcga gcgccccgcg aagcgctaca
     1321 cgctcgagct cgccatatgt ccggggatgc ttctacgggg gcgatcgctc gccctgccgg
     1381 gcaagggaac tcggtcaccc gacaaactga tgggacagcc ggtacgcttt tggcataaag
     1441 ggcggtcaat cttccgagca tctcacagac tcttcgtact cttccgcact ttccaatggc
     1501 caatcgaact tcgactctcg ccctcgccgc gctgctggcg gcggtggcgt cccttcccgc
     1561 ggccgcgcag tcgctcgcca cttacggctc cgccgaagtg gctggctatg gtgaaggctc
     1621 gctctttctc ggctccacgc tcggacttcc gggcgggcgg gggctctcgc ccttcgtgag
     1681 cgcgtacgtg cagacgtacc gctatcgcaa tggcctgaac tctcacgcca ccgcgacggc
     1741 gttcgcgccg gccgtcggcc tgtccgacgg gatgcccacc ggctccgtct cgggcagcct
     1801 cggctacaac ttcacgagca cggacgtgag caacacgccg atcgtcggcc ttcagggcgg
     1861 caacaccggc agcctgttca gcacgctgca ggcgaactac tggggcgacg gaaacagggc
     1921 ggcgcaggcg atcgtgtcgt acgcgtatcg ctcgcagtac gtctggagcc gcctgcgcgc
     1981 cgcgcagcgg gtgggcgcca gcccgtggtt cgctggtggc gaggtggtgt accagggcac
     2041 cagccacaga tacaaccagc accgctacca ggtaggcccc accatcgagt accgcttcac
     2101 cccgtcgttc cggatgggag gcgcggccgg ctacaagggt ggcgacaaca actatcccgg
     2161 caccgggtac gcgcagctca acttcctcgt gctcaccgac ctgggcaagt aagcgcggcg
     2221 cggcagtcgc gacgcaggat gcagaagagg gcggaccggt tcacggtccg ccctctttcg
     2281 ttcccgctc
//
LOCUS       DASSYW010000496         3992 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_656644, whole genome shotgun sequence.
ACCESSION   DASSYW010000496 DASSYW010000000
VERSION     DASSYW010000496.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3992)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3992)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3992
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_656644"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1041
                     /locus_tag="VFN38_07965"
     CDS             <1..1041
                     /locus_tag="VFN38_07965"
                     /inference="COORDINATES: protein motif:HMM:NF013528.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DHH family phosphoesterase"
                     /protein_id="HET9011737.1"
                     /translation="FPVPSVVSIDLLAVPPARRAAIDALVPYLVSGRKVALSTHLNAD
                     GDGCGSESALARMLSAHGLTPRIVNPTPWPEMFDFLKGDDVDDQTPRGSKALKGIDLL
                     IVLDISDVKRLGVLTDSVRALTVPKLVIDHHIDSDEPAGPVVVADTAACATAELVYDL
                     AVVLGSTLTPAIARSLYTGMLTDTGGFRFSNTSPRCLAVAAQLLAAGVDPEDMYTRIY
                     ASAPAGRVRLMADVLGTLQVDESLGLAWLSMGPDALEKHTVRAEDLDGIVEHARSIAG
                     TRMALFFRDLGHNKVKVSFRSTGSTDVNAFARQFGGGGHAKAAGALITGGLGEVRDRV
                     VDAARKVLATMA"
     gene            1225..2319
                     /locus_tag="VFN38_07970"
     CDS             1225..2319
                     /locus_tag="VFN38_07970"
                     /inference="COORDINATES: protein motif:HMM:NF022077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mrp/NBP35 family ATP-binding protein"
                     /protein_id="HET9011738.1"
                     /translation="MSKPLQERLAAALSQIRNPRTGAGVYESQQLRDIATTVDGKVRA
                     TLQLDAADDPTLARQVRRAIESVAGVTDIQLEVRSGAAPARGRSLPVMDQTPTAPARP
                     AAPTPKHFPNLGKVIAISSGKGGVGKSTVAVNLAVALAQGGARVGLMDADIYGPNIPR
                     MMGVTGAPPVVNEKILPLEAHGVKLISLGMMIEPDQPAIWRGPIVMKIINQFLQDVAW
                     GQLDYLIVDMPPGTGDAQLSLVQATQVDGAVIVTTPQEVSVGDALRGVKMFQRVGVPV
                     LGIVENMSWYECPHCGKPSAIFGSGGGERLATSLELPLLGQVPLYPRVMEGGDGGLPI
                     VTADAGSSAARALIAIAGRVAGAIGAVPAA"
     gene            2324..3721
                     /locus_tag="VFN38_07975"
     CDS             2324..3721
                     /locus_tag="VFN38_07975"
                     /inference="COORDINATES: protein motif:HMM:TIGR00797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HET9011739.1"
                     /translation="MTLGGSLPVESHEGLAPVAITNEWEAAHLVADPLPRTIARVALP
                     AVASSLLMTLFFSVDTFWIGTRVGATGLAAASTAVFWIWLLVSIAEMVSVGLTAVASR
                     RYGEGRGSEAARIAGDALVLALVLGTLSGVAGLLLLPHLFAVMHTPPEVTALGMRYLG
                     TYLLGAPLIFGFFAVDAAFRAAGDTRTSFLLLSASVAVTLVLDPMLIVGWGPIPPLGI
                     SGAAIATVCTRAVAFALGLAIVGRRGVLRIGRPDWRVLGTVTRIGLPTAVTGVVFSLI
                     YVLVTRTATQFGTPALAALGIGHRVESWLFMIGVGFGAATAAIVGQNLGAGRSDRAAR
                     AGWISVGFCTLFGVVACVVELIAPRWFASIFSHDPAVITEAARYLRIAAISQLGICAE
                     IVLEGALGGAGYTLAPMLTSTAITASRIPIAAWAATRYGINGLWWTIALTALGRAVGM
                     MAIWRWGRWKRTSIA"
     gene            3732..>3992
                     /locus_tag="VFN38_07980"
     CDS             3732..>3992
                     /locus_tag="VFN38_07980"
                     /inference="COORDINATES: protein motif:HMM:NF014003.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent chlorinase/fluorinase"
                     /protein_id="HET9011740.1"
                     /translation="MTRIITLLTDFGTADGYVGEMKGVLATGAAGASLVDVAHDLSPQ
                     DVDGARLALARYWRKFPPGTVHVVVIDPGVGSDRAALAVESEG"
BASE COUNT          523 a         1409 c         1434 g          626 t
ORIGIN      
        1 ttccccgtcc cttccgtcgt gtccatcgac ctgcttgccg tcccgcccgc ccgccgagcc
       61 gcgatcgacg cgctcgtgcc gtacctcgtg tccgggcgca aggtcgcgct cagcacgcac
      121 ctcaacgccg acggcgacgg ctgcggctcg gagtcggcgc tggcgcgcat gctgtcggcg
      181 cacggcctga cgccgcgcat cgtgaacccg acgccctggc cggagatgtt cgacttcctc
      241 aagggcgacg acgtggacga tcagacgccg cgcggctcga aggccctcaa gggcatcgac
      301 ctcctgatcg tgctcgacat cagcgacgtg aagcggctgg gggtgctcac cgactcggtg
      361 cgcgcgctca ccgtgccgaa gctcgtgatc gatcatcaca tcgactccga cgagccggcc
      421 ggcccggtcg tcgtcgcgga caccgccgcc tgcgccacgg cggagctggt ctacgacctc
      481 gcggtcgtcc tcggctcgac gctcaccccg gccatcgcgc gatcgctgta tacgggcatg
      541 ctcacggata ccggcggctt ccgcttcagc aacacgtcgc cgcggtgcct cgcggtcgcc
      601 gcgcagctgc tggcagcagg cgtggacccg gaggacatgt acacgcggat ctatgcgtcg
      661 gcaccggcgg gacgcgtgcg cctgatggcc gacgtgctgg gcaccctgca ggtcgacgag
      721 tcgctcggcc tcgcctggct gtcgatgggc cccgacgcgc tggagaagca cacggtgcgc
      781 gccgaggacc tcgacggcat cgtggagcac gcgcgctcca tcgccggcac ccgcatggcg
      841 ctcttctttc gcgacctcgg ccacaacaag gtcaaggtga gcttccgcag caccggctcg
      901 acggacgtga acgcgttcgc gcggcagttc ggcggcggcg gccacgcgaa ggccgcgggg
      961 gcgctgatca ccggcgggct gggcgaggtg cgcgaccgcg tggttgacgc cgcgcggaag
     1021 gtgctggcga cgatggccta gcgacccccg ttcgtcacgc ccctgcggtg aggaacgcgg
     1081 gttacgcggc ttacacggat ttgcattttc tgctggccgt ccatctgcgt tcatccgcga
     1141 agtctccgaa atccgcgttc cccacggttt ccggggagaa caccgtagtc gtggggacag
     1201 cgacgacggg ctagatttga gggcatgtcc aagccccttc aggagcgcct cgccgccgcg
     1261 ctctcccaga taaggaatcc ccgcaccggc gccggtgtgt acgagagcca gcagctccgc
     1321 gacatcgcca ccacggtgga cggcaaggtc cgcgcgacgc tccagctcga cgccgccgac
     1381 gatccgacgc tggcgcgcca ggtgcgccgg gcgatcgaga gcgtggccgg cgtgacggac
     1441 atccagctgg aggtccgcag cggcgcggcg ccggcgcgcg gccggagtct gccggtcatg
     1501 gaccagacgc cgaccgcacc ggcgcgtccc gccgccccga caccgaagca ctttcccaac
     1561 ctcggcaagg tgatcgcgat ctcgtcgggc aagggcggcg tggggaagtc caccgtcgcc
     1621 gtcaacctcg ccgtcgcgct cgcacagggc ggtgcacgcg tcggactgat ggatgccgac
     1681 atctacgggc ccaacattcc gcgcatgatg ggcgtcaccg gcgcgccgcc ggtggtgaac
     1741 gagaagatcc tgccgctcga ggcgcacggc gtgaagctga tctcgctcgg catgatgatc
     1801 gagccggacc agccggcgat ctggcggggt ccgatcgtca tgaagatcat caaccagttc
     1861 ctccaggacg tggcgtgggg gcagctcgac tacctcatcg tcgacatgcc gcccggcacc
     1921 ggcgacgcac agctctcgct ggtgcaggcg acgcaggtgg acggggcggt gatcgtgacc
     1981 acgccgcagg aggtgagcgt gggtgacgcg ctgcgcggcg tgaagatgtt ccagcgcgtc
     2041 ggcgtgccgg tccttggcat cgtggagaac atgagctggt acgagtgccc gcactgcggc
     2101 aagccgagcg cgatcttcgg gtccggtggc ggcgagcgcc tcgcgacgtc gctggagctg
     2161 ccgctgctcg gccaggtccc gctctacccg cgcgtcatgg aggggggcga cggcggcctc
     2221 ccgatcgtga cggcggacgc aggatcgtcg gcggcgcgcg cgctcatcgc catcgccggt
     2281 cgcgtcgccg gggccatcgg cgccgtgccg gcggcctgac ggcatgacgc tcggcggatc
     2341 gctaccggtc gagtcgcacg agggactcgc gccggtcgcg atcacgaacg agtgggaggc
     2401 cgcacatctc gtcgccgatc cgctgccgcg caccatcgcg cgggtcgcgc tccccgccgt
     2461 ggcgtcgtcg ctgctgatga cgctgttctt ctcggtggac accttctgga tcggcacccg
     2521 cgtgggcgcc acggggctcg ccgccgcgtc gacggcggtg ttctggatct ggctcctcgt
     2581 gtcgatcgcc gagatggtga gcgtcggact caccgcggtg gcgtcgcgcc ggtatggcga
     2641 gggacgcggc tcggaggcgg cgcgcatcgc cggcgacgcg ctggtgctgg cgctggtgct
     2701 cggcaccctg tccggggtcg ccgggctgct cctgctgccc catctgttcg ccgtcatgca
     2761 cacgcccccc gaggtgaccg cgctcggcat gcgctacctc ggcacctacc tcctcggcgc
     2821 gccgctcatc ttcggcttct tcgccgtcga cgccgccttc cgcgccgcgg gcgacacacg
     2881 cacgtcgttc ctgctgctca gcgcctcggt ggccgtgacg ctcgtcctgg acccgatgct
     2941 gatcgtggga tggggcccga tcccgccgct gggcatttcg ggggcggcga tcgcgaccgt
     3001 ctgcacgcgc gccgtcgcct tcgcgctggg cctggcgatc gtcggccggc gaggcgtgct
     3061 ccggatcggg cgtccggact ggcgcgtgct cggcacggtg acgcgcatcg gactgcccac
     3121 ggcggtcacg ggcgtcgtgt tctcgctcat atacgtcctc gtgacgcgga cggccacgca
     3181 gttcggcacg ccggccctgg ccgcgctggg catcggccac cgcgtcgaga gctggctgtt
     3241 catgatcggc gtcgggttcg gcgccgcgac ggcggcgatc gtcgggcaga atctcggcgc
     3301 aggacgttcc gatcgcgcgg cgcgcgccgg ctggatctcg gtgggcttct gcaccctgtt
     3361 cggcgtcgtg gcgtgtgtcg tggagctcat cgcgccgcgc tggttcgcgt ccatcttcag
     3421 tcacgatccc gcggtgatca cggaggcggc caggtacctg cggatcgcgg cgatctcgca
     3481 gctcggcatc tgtgccgaga tcgtgctcga gggcgcgctg ggcggcgcgg gctatacgct
     3541 ggcacccatg ctcacgtcga cggcgatcac ggcgagccgc atcccgatcg ccgcgtgggc
     3601 cgcgacgcgc tacggcatca atggactctg gtggacgatc gcgctcacgg ccctgggtcg
     3661 cgccgtcggc atgatggcca tctggcggtg gggccgctgg aagcgtacct ccatcgcatg
     3721 acgggaatcc gatgacgcgc atcatcacgc tgctcaccga cttcggcacc gccgacggct
     3781 acgtgggcga gatgaagggc gtgctcgcga ccggcgcggc gggcgcctcg ctggtggatg
     3841 tggcgcacga cctgtctccg caggatgtgg acggcgcgcg cctggccctc gcgcgctact
     3901 ggcggaagtt cccgccgggc acggtgcacg tcgtcgtgat cgatccgggg gtcggcagcg
     3961 accgcgcggc gctggccgtc gagagcgaag gc
//
LOCUS       DASSYW010000497         2041 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1624122, whole genome shotgun sequence.
ACCESSION   DASSYW010000497 DASSYW010000000
VERSION     DASSYW010000497.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2041)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2041)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2041
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1624122"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..656)
                     /locus_tag="VFN38_07985"
     CDS             complement(<1..656)
                     /locus_tag="VFN38_07985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HET9011741.1"
                     /translation="MSSRGSSCSRLILGATLLLLACKDTTAPRVPGTMSARSAVTQAA
                     RAGTAVAESPAVLVLDQDAQPLGGVTVAFAVTAGGGTVTGSPATTDDAGVARLASWTL
                     GSDGTTNVVRATVGSMSTDFEATALVAASLEIVSTQSQQAKAGTQVPTAPAVRVLDQN
                     GQPLPGVTVSFAVITGGGTVSGASATTDASGIARLASWTLGSDGTTNVVRATVGSMST
                     "
     gene            984..1355
                     /locus_tag="VFN38_07990"
     CDS             984..1355
                     /locus_tag="VFN38_07990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011742.1"
                     /translation="MRLTPALLFTALVALGSTPARAQDAPASKDSTWVGKSIVLTRVG
                     NRSMAAACETLAQIDHFERERAHKWDDASIGCRFVLAGNFTAARVLEQSGAYLHVKFD
                     RLGFPPTYTLWVPRANFRPAA"
     gene            1449..>2041
                     /locus_tag="VFN38_07995"
     CDS             1449..>2041
                     /locus_tag="VFN38_07995"
                     /inference="COORDINATES: protein motif:HMM:NF014477.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0017013 - protein flavinylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HET9011743.1"
                     /translation="MPASLLSRFHLLASRPPRPPRHAFHYDFVLGTSLDLQVMARDPR
                     AVQRAERAVLGEVERLDGILSGWSAVSELARWCATSDVDVAVSPELAEVLATAQMWRA
                     RTSGAFDPGAGALAALLRANAPAPEIDVRRRALLDALRGPHWSVDRIAGTARRLGAHA
                     ISLDAIAKGYIVSRAAACARDVEGVAGVLLNIGGDVQ"
BASE COUNT          293 a          736 c          710 g          302 t
ORIGIN      
        1 tcggtcgaca tgctgccgac cgtggcgcgc acgacgttcg tcgtgccgtc gctgccgagc
       61 gtccagctcg cgagccgcgc gatacccgat gcatcggtcg tggccgacgc gccgctcacc
      121 gtgccgccgc ccgtgatgac ggcgaacgac acggtcacgc cggggagcgg ctgtccattc
      181 tggtcgagca cgcgaaccgc cggcgcggtc ggcacctggg tgccggcctt cgcctgctgg
      241 gactgcgtcg acacgatctc cagcgacgcg gcgacgaggg ccgtcgcctc gaagtcggtc
      301 gacatgctgc cgaccgtggc gcgcacgacg ttcgtcgtgc cgtcgctgcc gagcgtccag
      361 cttgcgagcc gcgcgacgcc ggcgtcgtcg gtcgtggcgg gacttccggt cacggtgccg
      421 ccacccgcgg tgacggcgaa ggccaccgtc acgccgccca acggttgcgc atcctggtcg
      481 agcacgagca ccgcgggcga ctcggccacg gcagtgccgg cgcgcgcggc ctgcgtgacg
      541 gcggagcggg ccgacatcgt gccgggcacg cgcggcgcgg tggtgtcctt gcacgcaaga
      601 aggagcagcg tcgcgccgag gatgaggcgc gagcaggaag atccacgaga cgacatgtcg
      661 ggcggcagca gggaggagga cgtgctcgag acgaaggcgt tcgcagtctg cggcccgtca
      721 cggcgccagg caaccctggc atgcagcgat tcgaggcttg atcttcgggc gtccggagtg
      781 tgtggaattg ttaagccgtt ctcaccacca acttccctgc ctcgcatgga tccctgcgcc
      841 gagctgacgc tgcgcatcat tcggctggtg caggaaaccg agtgcgtgac atggagcccg
      901 tggacgggtg acgaggtctc gcccccgatc gtgttcaggg agacgatttt cggccatcga
      961 ctccttccgc gaccggggta atcatgcgcc tcacgccagc acttctgttc accgcactcg
     1021 ttgccctggg atccacgccc gcgcgcgcgc aggatgcgcc ggcgagcaag gactccacct
     1081 gggttggcaa gtcgatcgtc ctcacccgcg tcggcaaccg ctccatggcg gcggcctgcg
     1141 agacgctcgc gcagatcgac cacttcgaac gcgagcgtgc gcacaagtgg gacgacgcgt
     1201 cgatcggctg ccgcttcgtg ctcgccggca acttcaccgc ggcacgcgtg ctggagcagt
     1261 cgggcgccta cctgcacgtg aagttcgatc gcctgggctt cccgcccacg tacacgctct
     1321 gggttccgcg cgccaacttc cgccccgccg cctgagctga cgcaagcgag gcaggcagcc
     1381 agctcgaacg ggccacgacg gtcgctgccg gcaacagctg gaacccgagc ggtgtaagca
     1441 gagataccat gccggcgtcc ctgctttccc gcttccacct gctcgcatcg cgcccgccgc
     1501 ggccaccgcg gcatgcgttc cattacgact tcgtcctcgg cacctcgctc gacctgcagg
     1561 tgatggcgcg cgatccacgc gccgtccagc gggccgagcg cgccgtgctc ggcgaggtcg
     1621 agcggctcga cggcatcctc agtggatggt cggccgtgag cgagctcgcc cgctggtgcg
     1681 cgacatccga cgtcgacgtc gccgtctcgc ccgagctggc tgaagtgctc gcgaccgccc
     1741 agatgtggcg ggcgcggacg agcggcgcgt tcgacccggg ggcaggggcg ctcgccgcac
     1801 tgctgcgcgc gaacgctcct gcgccggaga tcgacgtccg acggcgcgca ctcctcgacg
     1861 cccttcgcgg gccgcactgg agcgtcgacc gcatcgcggg caccgcacgg cgactcggcg
     1921 cgcacgccat ctcgctcgac gccatcgcga agggctacat cgtctcgcgc gccgccgcgt
     1981 gcgcgcgcga tgtcgaggga gtcgccggcg tgctcctcaa catcggcggc gacgtgcagc
     2041 a
//
LOCUS       DASSYW010000498         3476 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1821073, whole genome shotgun sequence.
ACCESSION   DASSYW010000498 DASSYW010000000
VERSION     DASSYW010000498.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3476)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3476)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3476
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1821073"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..250
                     /locus_tag="VFN38_08000"
     CDS             <1..250
                     /locus_tag="VFN38_08000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011744.1"
                     /translation="ISVPIIAIGMPLARAYARRLESKPPAAIPPEVSARLERIEQAVD
                     AIAIEMERVSEGQRFTTKLLAERTAPAAPAPTARPDGS"
     gene            261..1640
                     /locus_tag="VFN38_08005"
     CDS             261..1640
                     /locus_tag="VFN38_08005"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HET9011745.1"
                     /translation="MSSVLIVDDEPNIRRMVSALLASEGYEVRDAAEGAAGLQRIAES
                     CPDVVLLDLMIPGELDGLATLARLREAVPDVPVIMMSGKAGLSDAVKATKLGAFNFLE
                     KPLSPEGVLLALASALELRRVRREARALREDLGLAGEMIGRSPAMDRVREMIARVAPT
                     DARVLIMGESGTGKELVASAIHFGSARKERPFVRVNCAAIPRDLVESEMFGHEKGAFT
                     GATERRIGRFELAHTGTLFLDEVGDLGAEAQAKLLRAIEAREIERVGGGKPIRVDVRI
                     VSATNRDLTRAAAEGSFRDDLLFRLNVIPIEIPPLRERPDDIPALVAHFSALHRARTG
                     RHPPQWTPGALSLLAQYRWPGNVRELANIVERLAILHPGADVDERQVRAVLPVDVGAR
                     RADAPLPDPTLLDESLTDTLDSHERTLIVRALSAAGGNVAEASRRLRTDRANLYRRMR
                     RLGIPVGDE"
     gene            1751..3454
                     /locus_tag="VFN38_08010"
     CDS             1751..3454
                     /locus_tag="VFN38_08010"
                     /inference="COORDINATES: protein motif:HMM:NF013283.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BamA/TamA family outer membrane protein"
                     /protein_id="HET9011746.1"
                     /translation="MRTLVLALGLTALPALVSAQGGDTVRARAGLPRDVAREVVALYN
                     ATTTLRTADQTEIPAGRDVAGDVAVLNGPVVIAGHVAGRVLAINADVLLRPGARIEGD
                     LLVVGGEVEGSEGATIGGELRIYHPPLRYTMEGDRLVAQDEEPATEELWWRRFERMGR
                     DNANRLEIATAGVYNRVEGLPVRIGPVLYRDQGWGHVRFAANAILRTGSSFSSSTPDV
                     GHLLLGEVRIGRRFGATLGGRLHDQVDGVESWQLSNAEVGLASFLFHRDYRDYYGRHG
                     GQLYASLRATENADLTLSYGDERWRSREARDPPTLLNNGLAWRPNPTMDAGLFHLANL
                     TLRIDTRNDTFNPWAGWYLLADYERGSGTIEVPGAVSTGVGAAPAGPVQYQRAFVDLR
                     RYNRINPTSALNLRIVLGGWMSGDPLPLERRLSIDGPGTVPGFDFRSGGVNDVGTCAT
                     SSAPPGRPAQCERIGLAQLEYRSDLRISFSSDAGGAPRTRFRADGAWIFFADAGRGWL
                     VNAPGSTLNFGRHDFPPLSTYRTDIGAGLDFNLLGIYAAKALSAPREPMKVFLRVRHR
                     F"
BASE COUNT          481 a         1200 c         1333 g          462 t
ORIGIN      
        1 catctcggtc ccgatcatcg cgatcgggat gcccctcgcg cgcgcgtatg cgcggcgcct
       61 ggagtcgaag ccgccggcgg cgatcccgcc cgaagtgtcg gcgcggctgg agcggatcga
      121 gcaggcggtg gacgccatcg cgatcgagat ggagcgcgtc tccgagggcc agcgcttcac
      181 gacgaagctg ctggccgagc gaacggcgcc ggcggcgccc gcgccgacag cgcggccgga
      241 cgggagctga gggcgcgccg atgtcgagcg tcctgatcgt cgacgacgag ccgaacatcc
      301 ggcgcatggt gagcgcgctg ctcgccagcg agggctacga ggtgcgcgac gccgcggagg
      361 gcgccgccgg gctgcagcgg atcgccgaga gctgcccgga cgtcgtgctg ctcgacctga
      421 tgatcccggg agagctggac gggctggcga cgctcgcgcg gctccgcgag gcggtgcccg
      481 acgtgccggt gatcatgatg agcggcaagg ccgggctgag cgacgccgtg aaggcgacga
      541 agctcggcgc cttcaacttc ctcgagaaac cgctctcgcc cgagggggtc ctgctggcgc
      601 tggcctcggc gctcgagctg cggcgcgtgc ggcgggaggc tcgggcgctg cgagaggacc
      661 tcgggctggc cggggagatg atcggccgca gcccggcgat ggaccgggtg cgcgagatga
      721 tcgcgcgcgt ggcgccgacg gatgcccgcg tgctcatcat gggggagtcg ggcaccggca
      781 aggagctcgt ggcgtcggcg atccacttcg gcagcgcgcg gaaggaacgg cccttcgtgc
      841 gggtgaactg cgcggcgatc ccgcgcgatc tggtggagag cgagatgttc ggccacgaga
      901 agggcgcatt cacgggcgcg acggagcgcc gcatcggccg cttcgagctc gcgcacacgg
      961 gcacgctctt cctggacgag gtgggcgatc tcggcgccga ggcgcaggcg aagctgctgc
     1021 gggcgatcga ggcccgggag atcgagcgcg tgggcggcgg aaagccgatc cgggtggacg
     1081 tgcggatcgt gagcgcgacg aaccgggacc tgacgcgcgc cgcggcggag gggagcttcc
     1141 gcgacgacct cctgttccgg ctcaacgtga tcccgatcga gattccgccg ctgcgcgagc
     1201 ggccggacga catcccggcg ctggtggcgc acttctccgc gctgcaccgg gcgcgcacgg
     1261 ggcgccaccc gccgcagtgg acgccgggcg cgctgtcgct gctggcccag taccgctggc
     1321 cgggcaacgt gcgcgagctg gcgaacatcg tggaacggct ggccatcctg catcccggcg
     1381 ccgacgtgga cgagcgtcag gtgcgggccg tgctgccagt ggacgtcggc gcgaggcgcg
     1441 cggacgctcc cctgcccgac ccgacgctgc tggacgaatc gctgacggac acgctggaca
     1501 gtcacgagcg aacgctcatc gtgcgcgcgc tctcggccgc aggcggcaac gtggccgagg
     1561 cgtcgcgccg gctcaggacc gaccgggcga acctgtaccg ccgcatgcgg cgcctcggca
     1621 tccccgtcgg cgacgaatga gcggacgcgc gctccggcaa cctcctgccg ggccgcgggg
     1681 tatgtcaccg gatttccgcc gggggcgacg cgccggcggc cgtgctccaa ctccacccct
     1741 cccgaccttc atgcgaaccc tcgtcctcgc gctcggcctg acggccctgc cggcactcgt
     1801 gagcgcccag ggcggcgata ccgtgcgcgc ccgggccggg ttgccgcgcg acgtggcacg
     1861 cgaagtcgtc gcgctgtaca acgcgacgac gaccctgcgg accgccgacc agacggagat
     1921 cccggccggc cgcgacgtgg cgggggacgt cgcggtgctc aacggcccgg tcgtgatcgc
     1981 cggtcacgtg gcgggacgcg tgctggcgat caacgccgac gtgctgctgc gtccgggcgc
     2041 ccggatcgaa ggggacctgc tggtggtggg aggcgaggtg gaggggagcg agggcgccac
     2101 gatcgggggc gagcttcgca tctatcaccc gccgctgcgg tacacgatgg agggcgaccg
     2161 gctggtggcg caggacgagg agccggcgac cgaggagctg tggtggcgac gattcgagcg
     2221 gatgggacgc gacaacgcga accggctcga gatcgcgacg gcgggggtgt acaatcgcgt
     2281 cgaggggctg ccggtgcgca tcgggcccgt gctctaccgc gaccaggggt gggggcacgt
     2341 gcgcttcgcg gcgaacgcga tcctccgcac gggcagcagc ttctcctcgt cgacgccgga
     2401 cgtgggacac ctgctgctcg gggaggtgcg catcggacgg cggttcggcg ccacgctggg
     2461 cgggcggctt cacgaccagg tcgacggggt ggagtcctgg cagctcagca acgcggaggt
     2521 ggggctcgcg tcgttcctgt tccatcggga ctatcgcgac tactacgggc gccacggcgg
     2581 gcagctctac gcgtcgctgc gcgccaccga gaatgccgac ctcacgctct cgtacggcga
     2641 cgagcgctgg cgctcgcgcg aggcgcgcga tccgccgacg ctgctgaaca acgggctggc
     2701 gtggcgcccc aatccgacga tggatgcggg cctctttcac ctggcgaacc tcacgctgcg
     2761 gatcgacacg cggaacgaca cgttcaatcc gtgggcgggg tggtatctgc tcgccgacta
     2821 cgagcgcggc agcgggacga tcgaggtgcc gggcgccgtg tccaccggcg tgggcgcggc
     2881 gcccgccggc ccggtccagt atcagcgcgc cttcgtcgac ctgcgccggt acaaccggat
     2941 caatcccacc tcggccctca acctgcgcat cgtgctgggc gggtggatga gcggcgaccc
     3001 cctgcccctg gagcggcggc tgtcgatcga cggaccggga acggtgccgg gcttcgactt
     3061 ccgctccgga ggggtgaacg acgtgggcac gtgcgcgacg tcgagcgcgc cgccggggcg
     3121 tcccgcccag tgcgagcgca tcggcctcgc acagctggag taccggagcg acctgcggat
     3181 ctccttctcc agcgacgcgg gcggcgcacc gcggacgcgc ttccgcgccg acggggcgtg
     3241 gatcttcttc gccgacgcgg ggcgcggctg gctggtgaac gcgccgggca gcacgctcaa
     3301 cttcggccgc cacgactttc cgccgctctc cacgtaccgc acggacatcg gcgccggcct
     3361 cgacttcaac ctgctcggga tctacgccgc gaaggcgctc tcggcgccgc gcgagccgat
     3421 gaaagtcttc ctgcgcgtgc gtcaccgctt ctagggtgcc acgcctcccc ttttcc
//
LOCUS       DASSYW010000499         3668 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_377921, whole genome shotgun sequence.
ACCESSION   DASSYW010000499 DASSYW010000000
VERSION     DASSYW010000499.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3668)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3668)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3668
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_377921"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..843
                     /locus_tag="VFN38_08015"
     CDS             <1..843
                     /locus_tag="VFN38_08015"
                     /inference="COORDINATES: protein motif:HMM:NF017984.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix DNA-binding domain-containing
                     protein"
                     /protein_id="HET9011747.1"
                     /translation="AVDARWMLELLAPRIMRGAAGRHRQMELDDAAFRRTRAILGRAM
                     QDEPVLTRAAVYEALEMGGVPTTGQRGIHILRHLSMERMLCLGPHAGKQPTFVLFDAW
                     IGDSRRLDRDDALRTLAERYFVSHGPATLRDFVWWTGLTVAEAKVALHLARPALERVA
                     TDDDELWMSREPAAADEPDAPAHLLPGFDELLLGYKDRSASLAPRHAGLVVPGGNGVF
                     RATLVLGGRVCGTWTRSARDTEMQLEASPFGRLTAAEQRAFTAPAERYARFLGEAVTL
                     RWAD"
     gene            complement(968..2794)
                     /locus_tag="VFN38_08020"
     CDS             complement(968..2794)
                     /locus_tag="VFN38_08020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011748.1"
                     /translation="MLYRTRGTLGRLSLAAGMLATASCAGSSGGYGAPAPLPAVRTAS
                     TTDPRVTLRAGFADAGESALNMRLVSHSAKSSMLDGEGGARGLTFANSDLAFRGNYVY
                     QGNFSGFQIWDIANPARPVLRKTVVCGTGQGDPSIYGNLLFVSSEGTGNRTDCGTQGV
                     ADRVSMDRMVGVRIFDVSDIENPRKVIDIQTCRGSHTHTLVPDPTDPGVVYVYVAGSA
                     GVRPAEELPGCVDAPIDSANSARFRIEVIRVPLAHPEQAKIVSYARVFNDLTAARAHG
                     DAPGDVGAAPRRARPAGAEPRGGPNQCHDITVYPAVGLAGGACGGYGLLLDIRDPVNP
                     KRLQAVGDTNFAFWHSATFNNDGTKVLFTDEWGGGTSPKCRADDPIDWGGDAIFTIRD
                     GRLTQGAYFKLPAAQTRQENCVAHNGSLVPVPGRDIMVQGWYQGGVDVIDFTNAWHPV
                     EIAHFDRGPVDSTKLVTAGFWAGYWYNGHIIASEMARGLDIFELTPSEHLSQNEIDAA
                     KLVRFDTFNPQMQPKIVWPAAFPVVRSYLDQLVRGKGLAAARTSAIADALNAAEKLGG
                     ADRRAALTALASQLDGDAPGAADGARVRAMAAAVRDLANAGS"
     gene            complement(2812..3456)
                     /locus_tag="VFN38_08025"
     CDS             complement(2812..3456)
                     /locus_tag="VFN38_08025"
                     /inference="COORDINATES: protein motif:HMM:NF015658.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF305 domain-containing protein"
                     /protein_id="HET9011749.1"
                     /translation="MPFQRVRKRITVAFAFATLATLAGPAARAQASPAAAGGPRHTAA
                     DVRFMHDMIAHHAQALVMAAMAPTHGASPQVSLFCRKVLVSQRDEIELMQEWLRERGE
                     KVPDASAEHAHGAMHIEMGKDEHEMRMPGMLTPAQLRQLDEARGAEFDRLFLTFMIQH
                     HEGALTMVAKLFDSPGAGQTPEIFGIATGVDADQRAEIARMQDMLTTITGRAQK"
BASE COUNT          501 a         1279 c         1357 g          531 t
ORIGIN      
        1 gcggtggacg cgcgctggat gctggagctg ctggcgccga ggatcatgcg gggcgcggcg
       61 gggcgccacc ggcagatgga gctggacgac gcggctttcc ggcgcacccg cgccatcctc
      121 ggccgcgcga tgcaggacga gcccgtgctc acgcgcgccg cggtctacga ggcgctcgag
      181 atgggagggg tgccgaccac cggccagcgc ggcatccaca tccttcggca cctgtcgatg
      241 gaacggatgc tctgcctggg gccgcacgcc gggaagcagc ccaccttcgt gctgttcgac
      301 gcgtggatcg gcgactcgcg gcggctcgat cgcgacgacg ccctgcggac gctggccgag
      361 cggtacttcg tcagccacgg gccggcgacg ctgcgcgact tcgtgtggtg gaccgggctc
      421 acggtggccg aggcgaaggt cgcgctgcat ctggcgcggc ccgcactgga gcgcgtggcc
      481 accgacgacg acgagctgtg gatgtcccgc gagcccgccg cggcggacga accggacgcg
      541 cccgcccatc tgctgcccgg attcgacgag ctgctgctgg gctacaagga tcgcagcgcg
      601 tcgctcgcgc cccggcacgc cggcctcgtg gtgccgggtg gcaacggagt gttccgcgcg
      661 acgctcgtgc tcggcggccg ggtgtgcggg acgtggacgc ggtcggcgcg cgacacggag
      721 atgcagctcg aggcatcgcc cttcggtcgg ctgacggcag ccgagcagcg cgcgttcacc
      781 gcgccggcag agcgctacgc acgctttctc ggcgaggcgg tcaccttgcg atgggcggat
      841 tgagaaaggc cggcacgtcg cgctagcggg gcgacacgcg tagcgaatgc gcggaagcgc
      901 cgaacgggcg ggagggagcg atcgatccgc tccttcccgc ccgttcggtc acttcagcgg
      961 agccggctca ggatccggcg ttcgccaggt cccgcaccgc cgccgccatc gcccgcaccc
     1021 gcgcgccgtc cgcggcgccc ggcgcgtcgc cgtcgagctg cgacgccagc gccgtgagcg
     1081 cggcgcggcg atcggcgccg cccagcttct cggccgcgtt cagcgcatcg gcgatcgccg
     1141 acgtgcgcgc ggcggcgagg cccttgccgc gcacgagctg gtcgaggtac gaccgcacca
     1201 ccgggaaggc ggccggccac acgatcttcg gctgcatctg cgggttgaag gtgtcgaacc
     1261 gcacgagctt cgccgcgtcg atctcgttct gcgacaggtg ctcgctcggc gtgagctcga
     1321 agatgtcgag cccgcgcgcc atctccgacg cgatgatgtg gccgttgtac cagtagccgg
     1381 cccagaagcc cgccgtcacc agcttcgtcg agtccaccgg cccgcggtcg aagtgggcga
     1441 tctccaccgg atgccacgcg ttggtgaagt cgatcacgtc cacgcccccc tgataccagc
     1501 cctgcaccat gatgtcgcgg cccggcaccg ggacgagcga gccgttgtgc gccacgcagt
     1561 tctcctgcct ggtctgcgcc gccggcagct tgaagtaggc gccctgggtg agccgcccgt
     1621 cgcggatggt gaagatcgcg tcgccgcccc agtcgatggg atcgtcggcg cggcacttcg
     1681 gcgaggtgcc gccgccccac tcgtcggtga acagcacctt ggtgccgtcg ttgttgaagg
     1741 tggccgagtg ccagaaggcg aagttggtgt cgcccaccgc ctggaggcgc ttcgggttca
     1801 ccgggtcgcg gatgtcgagc agcaggccgt agccgccgca cgcgccgccg gcgaggccga
     1861 cggccgggta cacggtgatg tcgtggcact ggttgggacc gccgcgcggc tcggcgccgg
     1921 cggggcgggc gcggcgcggc gcggccccga cgtcacccgg cgcgtcgccg tgtgccctgg
     1981 ccgcggtgag gtcgttgaag acgcgcgcgt agctcacgat cttcgcctgc tcgggatgcg
     2041 ccagcggaac gcggatcacc tcgatgcgga agcgggcgct gttcgcggag tcgatggggg
     2101 catccacgca gccgggaagc tcctcggccg ggcgcacgcc cgccgagccg gcgacataga
     2161 cgtagacgac gccgggatcc gtggggtcgg ggacgagggt gtgggtgtgc gagccgcggc
     2221 aggtctggat gtcgatcacc ttgcgcggat tctcgatgtc ggagacgtcg aagatgcgca
     2281 cgcccaccat gcggtccatg ctgaccctgt cggcgacgcc ctgggtgccg cagtcggtgc
     2341 ggttgcccgt gccttccgat gagacgaaga gcaggttgcc gtagatggag gggtcgccct
     2401 ggccggtgcc gcagacgacc gtcttgcgca gcacggggcg ggcgggattg gcgatgtccc
     2461 agatctggaa gccgctgaag ttgccctgat agacgtagtt gccgcggaag gcgaggtcgg
     2521 agttggcgaa cgtcagcccg cgcgcgcccc cctcgccgtc gagcatgctc gacttggccg
     2581 agtgcgacac gagccgcatg ttgagcgccg actcgccggc gtcggcgaag cccgcgcgca
     2641 gcgtgacacg cgggtcggtg gtggacgcgg tgcggaccgc gggcagcggg gccggcgcgc
     2701 cgtagccgcc cgacgatccc gcgcacgacg cggtggccag cattccagcg gcgagcgaca
     2761 gccggcccag cgtccctcgg gtgcggtaca gcatcggact cggtacacgc ttcatttctg
     2821 tgctctcccc gtgatggttg tcagcatgtc ctgcatgcgc gcgatctcgg cgcgctggtc
     2881 ggcgtccacc cctgtggcga ttccgaagat ctccggcgtc tggcccgcac ccggcgaatc
     2941 gaacagcttc gccaccatgg tgagggctcc ctcgtggtgc tggatcatga aggtgaggaa
     3001 caggcggtcg aactccgcac cgcgcgcctc gtcgagctgc cggagctgcg ccggcgtgag
     3061 catccccggc atgcgcatct cgtgctcgtc cttccccatc tcgatgtgca tggcgccgtg
     3121 cgcgtgctcc gcgctcgcgt caggcacctt ctcgccgcgc tcccgcagcc actcctgcat
     3181 cagctcgatc tcgtcgcgct gcgacacgag gaccttgcgg cagaacaggc tcacctgcgg
     3241 gctggcgccg tgggtgggcg ccatggccgc catcacgagc gcctgcgcat ggtgggcgat
     3301 catgtcgtgc atgaaccgca cgtcggccgc ggtgtggcgc ggaccacccg ccgcggccgg
     3361 cgacgcctgg gcccgggcgg cgggaccggc gagagtggcg agcgtggcga aggcgaacgc
     3421 cacggtgatg cgcttgcgaa cccgctgaaa gggcacggac catcctccgg gaacatgagc
     3481 cggcacaggg gcggcacccg gcgggcgccg gacggcgtgt cgccgcccct gaacacatat
     3541 atggatgtac ggacaactcc actacggggc cagcccccga agcgctggcc cgccgggcgc
     3601 tggggcgcta tgctcgggtc gccacgagac ttccggtcag cgcctcccgc acccactcac
     3661 gccatgcg
//
LOCUS       DASSYW010000500         2499 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_67647, whole genome shotgun sequence.
ACCESSION   DASSYW010000500 DASSYW010000000
VERSION     DASSYW010000500.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2499)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2499)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2499
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_67647"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1367
                     /locus_tag="VFN38_08030"
     CDS             <1..1367
                     /locus_tag="VFN38_08030"
                     /inference="COORDINATES: protein motif:HMM:NF013698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HET9011750.1"
                     /translation="RGSLLEEGIVQRYPCVVVTRGVRRRNERLARLRAIVRPELAIVA
                     VDLASASQAAVVCDHDSVVLARRMFAGSAWAIDAILDWAQPIARAAGFAGVVVACEPT
                     GHRWKPLLERARARDVGLVCVQPLLVHRGREGEDFTRERSDYHDAAIIGRLAGELRCY
                     VPYALQGEWARLRHLGARRNGQLVVATGARQALRDLLECAWPGVLAVAAKPLESLTWR
                     AAMRVSTDPAVIAALGYETFAARVGEQLRTLGGRRRNHRIMRAVFAAAQAPDGLACER
                     RAACERAAFVLGDWERALAELAIVEARMICTLDALALRELCQSIDGLSAVGAAAILAE
                     TGDPDRFGGPRSWPKHAGICPRANESGTYRGQTKASGRGRPALRTAVWRAIWGLLPHN
                     AVYAARYEHLTTRTRNQLTDGQARAALGAALLRQLFVVVTRRVPWDPVIAAGRKEVQL
                     PQAA"
     gene            1585..2367
                     /locus_tag="VFN38_08035"
     CDS             1585..2367
                     /locus_tag="VFN38_08035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011751.1"
                     /translation="MRRRENPACPHTTTSALDKRVIGCSSEEQQQTAAARERALCKAE
                     AQLQRVQNGLGGRYYKTRKQVERRVAKIIATNIEGLITTTTGTRKGKPTLTWARDHDA
                     ITAAAQTDGIYALATNLPGARLTAGQLLRTYKAQQIIERRHRDYKQTLKVRPIFLHND
                     DRIYALTSIIGIALLIFGLIETELRKRLHDDEPLPGLLPEGRAAKPTGRNVLGAFQGL
                     GLTHTRTGIELDRLTHTQRRILELLEITPPWPEQTPAALALP"
BASE COUNT          381 a          937 c          863 g          318 t
ORIGIN      
        1 tccggggttc gcttctcgag gagggcatcg tgcagcggta tccctgtgtg gtggtgacgc
       61 gtggtgtgcg gcgtcgcaac gagcggctcg cgcggttgcg cgcgatcgtg cggccggagt
      121 tggcgatcgt ggccgtcgat ctggcgtcgg cgagtcaggc ggcggtggtg tgcgatcacg
      181 actccgtcgt gctcgcgcgg cggatgttcg cggggtcggc gtgggcgatc gacgcgatcc
      241 tcgactgggc gcagccgatc gcgcgcgcgg cggggttcgc cggcgtcgtg gtcgcgtgcg
      301 agccgaccgg gcatcgctgg aagccgctct tggagcgtgc gcgcgcgcgt gacgtggggt
      361 tggtgtgcgt gcagccgctg ttggtgcacc gcggccgcga gggcgaggac ttcacgcgcg
      421 agcgcagcga ctaccacgac gcggcgatca tcggccggct ggcgggcgag ctgcgctgct
      481 acgtgcccta tgcgttgcag ggggagtggg cgcggctgcg gcacttggga gcgcgccgca
      541 acgggcagct ggtcgtcgcg acgggcgcgc gccaggcgct gcgcgatctg ctggagtgcg
      601 cctggcccgg ggtgctcgcg gtcgcggcca agccgcttga gtcgctgacg tggcgcgccg
      661 cgatgcgcgt gtcgaccgat ccggccgtga tcgccgcgct cggctatgag acgttcgccg
      721 cgcgcgtcgg cgagcagctg cgcacgctcg gcgggcggcg ccgcaaccac cgcatcatgc
      781 gcgccgtctt cgccgccgcg caggcgcccg acgggctggc gtgcgagcgc cgcgccgcct
      841 gcgagcgcgc cgccttcgtg ctcggcgact gggaacgcgc gctcgccgag ctcgccattg
      901 tcgaggcgcg catgatctgc acgctcgacg cgcttgcgct gcgcgagctg tgccagagca
      961 tcgacggcct gtcggcggtc ggcgccgccg cgatcctcgc cgagaccggc gaccccgacc
     1021 gcttcggcgg gccgcgcagc tggcccaaac acgccggcat ctgcccacgc gccaacgagt
     1081 ccggaaccta ccgcggccag accaaggcct ccggtcgcgg ccggcccgcg ctgcgcaccg
     1141 ccgtctggcg cgcgatttgg ggcttgctgc cccacaacgc cgtctacgcc gcgcgctacg
     1201 agcacctcac cacgcgcacc cgcaaccagc tcacagacgg ccaagcacgc gccgcgctgg
     1261 gcgcagcgct gctgcgccaa ctgttcgtcg tcgtcacgcg ccgcgtcccc tgggacccgg
     1321 tgatcgccgc cggccgcaag gaggtacagc tgccgcaagc cgcctgacgt gcgatgctgg
     1381 cgggggcggg gcgaacccgc acttcccttg ggaacaaccc gcaggtgagc ctgggcgccc
     1441 cgcccgctcc cgacagaaag ctcgcatgag ggctgtcggg acgaacccgc ttggacgcta
     1501 ggtcgagccg cgggagcggg caggcacccg cccccatcgc cgacggcacc ttcccccctt
     1561 caccagccga cacccgcacc acccgtgcgc cgacgggaga accccgcctg cccgcacacc
     1621 acaacctccg cccttgacaa acgcgtcata ggctgctcat ccgaggagca acagcagacg
     1681 gccgccgccc gcgagcgcgc gctctgcaag gccgaagcgc agctccagcg cgtccagaac
     1741 gggctcggcg ggcgctacta caagacccgc aagcaggtcg agcggcgcgt cgcgaagatc
     1801 atcgccacca acatcgaggg cctgatcacg accacgacgg gcacgcgcaa gggcaagccg
     1861 acgctcacct gggcgcgcga ccacgacgcg atcaccgccg ccgcccagac cgatgggatc
     1921 tacgcgctgg cgaccaacct gcccggcgcg cgcctgaccg ccggccaact gctgcgcacc
     1981 tacaaggccc agcagatcat cgagcgccgc caccgcgact acaagcagac gctcaaggtc
     2041 cgcccgatct tcctgcacaa cgacgaccgc atctacgcgc tcaccagcat catcgggatc
     2101 gcgctgctga tcttcggtct gatcgagacc gagctgcgca agcgtctgca cgacgacgaa
     2161 ccgctacccg ggctgctacc cgaaggacgc gccgccaagc ccaccggacg caacgtgctc
     2221 ggcgccttcc aaggactcgg actcacccac acccgcaccg gcatcgagct cgaccgcctc
     2281 acccacaccc agcgccgcat cctcgagcta ctcgagatca cgccaccctg gccagagcaa
     2341 acgccggcag cgctagcact tccgtagtgc ggaaaacgcg gctagcccgg cgccgagaat
     2401 gcgttccgca ggcccgtgac ggcgaggcgt ggcgcgcgga tatccctcgc gccgctcgga
     2461 tctgccgctc tgaaaacgcg ctgaaaaggc aggaaaagg
//
LOCUS       DASSYW010000501         2192 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1361666, whole genome shotgun sequence.
ACCESSION   DASSYW010000501 DASSYW010000000
VERSION     DASSYW010000501.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2192)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2192)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2192
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1361666"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            183..1205
                     /locus_tag="VFN38_08040"
     CDS             183..1205
                     /locus_tag="VFN38_08040"
                     /inference="COORDINATES: protein motif:HMM:NF013073.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NlpC/P60 family protein"
                     /protein_id="HET9011752.1"
                     /translation="MRRIALLAACLVVLAPASGQAAKPKQSRSWAQAEIKLVVGRGMM
                     APSVAAFRPDAPLTQAALSELIAQLTDSEPQAVSAPTARVTMAQLDAQLVRAVGLGDE
                     AASFHQSAAAAGTRPPTRFGTEVVARLIGLRKNHPAGQDDLERLPSDVATRAEAAYSA
                     AQILRLSNWELHAVEDAAGVFALPELTAWQRKILTTAFGLIGYPYVWGGESESRLSPF
                     GPQPAGGFDCSGFAWRVYKLQKYPGAGRLADTLRGRTAAAMAGEVGPARRIRRARIAP
                     ADLLFFANGGPQAKPAAVDHMGIYIGNGWLVHSSRYGVALAPLEHWYDERLAWGRRPL
                     LEAGLG"
     gene            1485..>2192
                     /locus_tag="VFN38_08045"
     CDS             1485..>2192
                     /locus_tag="VFN38_08045"
                     /inference="COORDINATES: protein motif:HMM:NF044948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011753.1"
                     /translation="MQRLLPIVAPVCTLGLFSVAAAAISFASEPHSAAMLAGVAALLA
                     ASTLASHFPVPIEGPNAGGVSLSFVFAASAIVLFGWDAGVLVAFAAPALIQLVEHRPL
                     IRIAYNASVFAIAAFVAGHLVGLVEGEGTDVLIAKVAISATVQYAINLVLITLIVART
                     SRRPFLELIQASLRWTIVIFALMGSAALVLVVLWQRSPLLSVALFGPLLAIALYQRST
                     YRALRAMRLALTDPLTGL"
BASE COUNT          285 a          811 c          731 g          365 t
ORIGIN      
        1 actcgacgtt ctcgagcatg ccggccagcc gccagacgct ctcgtaggcc tgcggccgct
       61 cgtcggccga ggccagcgcc tggcggatcg ccgcctcgtg gtcggggggc ggctcgggac
      121 gaatctcgag ctccatcggt ccgagcctaa aggagcgact cgcagccgac gatgaccaag
      181 gtatgcggcg cattgccctg ctcgcagcct gtctggtcgt gctcgcgcct gcctcgggac
      241 aggccgcgaa gccgaagcag agtcgatcct gggcgcaggc cgagatcaag ctggtcgtcg
      301 gccgcggcat gatggcgccc agcgtcgccg ccttccggcc cgacgcgccg ctcacgcagg
      361 cagccctcag cgagctgatc gcacaactga cggacagcga gccgcaggcg gtgtccgccc
      421 cgacggcgcg cgtgacgatg gcccaactcg acgcgcaact cgtgcgggca gtggggctcg
      481 gagacgaggc cgcgagcttc caccagtcgg cggctgcggc cggcaccagg cctcccaccc
      541 gcttcggcac cgaggtcgtc gcgcggctga tcggcctccg caagaaccac cccgccggcc
      601 aggacgatct cgagcggctg ccctccgacg tcgcaacccg tgcggaggcc gcgtactcgg
      661 ccgcgcagat cctgcgcctg tcgaactggg agttgcacgc agtcgaagac gccgccggcg
      721 tgttcgcgct tcccgagctg acggcgtggc agcgaaagat cctgaccacc gcgttcggcc
      781 tgatcggcta cccctacgtc tggggcggcg agagcgagag ccggctgtcc ccgttcggtc
      841 cgcagcccgc cggcggcttc gactgctcgg gcttcgcgtg gcgcgtgtac aagctgcaga
      901 agtacccggg tgccggccgt ctcgccgaca ccctgcgggg acggacggcg gccgccatgg
      961 ccggcgaagt gggcccggca cgccgcattc gccgcgcgcg catcgccccg gccgacctgc
     1021 tcttcttcgc gaacggtggc ccccaggcga agccggccgc cgtcgaccac atgggcatct
     1081 acatcggcaa cggctggctc gtccactcct cgcgctacgg cgttgccctg gccccgctcg
     1141 agcactggta cgacgaacgc ttggcgtggg gtcgccgccc gctgttggag gccggcctcg
     1201 gctagccgct ggccggttct cgctcgaaaa tcgcactttc cacctgtgga taagttcacc
     1261 cgaatgggtg atggctgtgc tttccccgca ggcaacaatc gtcgcagtcg taagccatcc
     1321 actacgccat ggggaggcac cgcacatgct cgaatggcgc ccgcgcttga ttgccttgct
     1381 cgtcctggtc gtgctgctcg cactggccgc cgggtacggg ctcccgctcg ccgataactg
     1441 ggagtggtag ccgcctagtc caggggctgc cggggagcga ggacatgcag aggctgttgc
     1501 cgatcgtcgc gccggtctgc acgctcggcc tgttttccgt cgcggcggcg gcgatctcgt
     1561 tcgcgagtga gccgcactcc gccgcgatgc tcgcaggggt cgcggccctg ctcgccgcct
     1621 cgacgctcgc cagccacttc ccggtcccga tcgaggggcc gaacgccggc ggcgtttcgc
     1681 tctcgttcgt cttcgcagcg agcgcgatcg tcctcttcgg ctgggatgca ggcgtcctcg
     1741 tcgcgttcgc ggcgccggcg ctgatccagc tcgtcgagca ccgtccgctg atccgcatcg
     1801 cctacaacgc atccgtcttc gcgatcgccg ccttcgtcgc cggccatctg gtcggcctgg
     1861 tcgagggcga gggcaccgac gtgctgatcg cgaaggtcgc catctccgcc accgtccagt
     1921 acgcgatcaa cctcgtcctg atcacgctca tcgtcgcgcg cacctcgcgg cgcccgttcc
     1981 tcgaactgat ccaggcgagc ctccgctgga cgatcgtgat ctttgccctg atggggtccg
     2041 cagcgctcgt gctcgtggtg ctgtggcagc ggtctcccct cctctccgtc gcgctgttcg
     2101 gcccgctgct ggcgattgcg ctctaccagc ggtcgaccta tcgcgcgcta cgcgccatgc
     2161 gcctggcgct gacggacccc ctgacgggtc tc
//
LOCUS       DASSYW010000502         2566 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_424363, whole genome shotgun sequence.
ACCESSION   DASSYW010000502 DASSYW010000000
VERSION     DASSYW010000502.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2566)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2566)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2566
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_424363"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..933)
                     /locus_tag="VFN38_08050"
     CDS             complement(<1..933)
                     /locus_tag="VFN38_08050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011754.1"
                     /translation="MIASVLDLLAASSPEESVEVLVTWVGAVTLIRYRYALGRRRERS
                     ALEKRTGFLISALALLLLLRGFGWLSDDDRLLGALMLLPANTLPLAMTLFVEGLLRRH
                     VARWIKWLAVALTVAAVTTTIVVRSFSGTSPWPNYVLLASLLLMMGVLGLTLARRDRG
                     SLSRSENGLVRACLLVTLLALPLAATDFRFDVEWALPRLGTIGTLLFCYTLLRRPEEH
                     AHLAWWARDIGRLLLRAAIVCLLLFVALRTAPANLMAPLAALATTLVLAGAILNRLSE
                     TRGSRSEAALLRWLSRPPAKSLQGFVRELHHLPLT"
     gene            complement(930..1811)
                     /locus_tag="VFN38_08055"
     CDS             complement(930..1811)
                     /locus_tag="VFN38_08055"
                     /inference="COORDINATES: protein motif:HMM:NF013094.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008641 - ubiquitin-like modifier
                     activating enzyme activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ThiF family adenylyltransferase"
                     /protein_id="HET9011755.1"
                     /translation="MKELPPFSYAEMVTRNAGFVTPAEQQMLRHGRVFVCGVGGMGGA
                     ALQSLVRAGVGHFALADLDVFETSNLNRQVFATTDTLGHRKVAATCAALTRINPDVAL
                     TTYGPEWTDHLDEILPVHRVVINGMDDLAAGIALYRKAREHGATVIDAYTAPLPSVTV
                     VGPLDPRPEERLGFPTVGTDWRKLLPAQIDACKIAEAIYVMVHSSSAHHIDVALAADL
                     VAGRTTRPSFAPMVIETGTLMAFEAVKLLLGRESGVGHRGVFLNPWTLEVERPRTPPV
                     AWVRERIARRFLARMMA"
     gene            complement(1808..>2566)
                     /locus_tag="VFN38_08060"
     CDS             complement(1808..>2566)
                     /locus_tag="VFN38_08060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011756.1"
                     /translation="ITIVYDRAGLPVAFNALTLLDCELRGRPIEVLHLGLVMVDPAHR
                     AGGLSSVLYGLTAFLLFARRRLRPLWVSNVTQVPAVFGMVSESFDDVYPTPNADARQS
                     YDHLHLARQIMARHRHVFGVGPDATYDEQQAIIRNAYTGGSDNLKKGFDDAPKHRNDV
                     YNAACRTALDYDRGDDFLQLGQVTLGAARRFFTRSSPAVSPVAFTRTFALLALESLVA
                     PVLQWFAADTPMGDLRPALGGKRGTWDAGRGAQR"
BASE COUNT          404 a          823 c         1004 g          335 t
ORIGIN      
        1 ggtgagcggc aggtggtgca gctcgcgtac gaagccctgc agcgacttgg ccggcgggcg
       61 cgagagccag cgcaggagtg ccgcctcgct gcgcgagccc cgcgtctcgg acaggcggtt
      121 gaggatcgcc ccggcgagca cgagcgtggt ggcgagggcg gccagcggcg ccatgaggtt
      181 ggcgggcgcc gtgcgcaggg cgacgaagag caagaggcac acgatggccg cgcgcagcag
      241 caggcgaccg atgtcgcgcg cccaccaggc gaggtgggca tgctcttcgg ggcggcgcag
      301 cagcgtgtag cagaagagca gtgtgccgat ggtgccgagg cgcggcaggg cccattcgac
      361 gtcgaagcgg aagtcggtcg ccgcgagcgg gagggcgagc agggtgacga gcaggcaggc
      421 ccgaaccagc ccgttctcgc tgcgcgacag gctgccgcga tcgcgccggg cgagggtgag
      481 gccgagcacc cccatcatca gcaggaggga ggcgagcagg acgtaattgg gccacgggct
      541 cgtgccgctg aacgagcgca cgacgatcgt cgtcgtgacc gcggcgacgg tgagtgccac
      601 ggccagccac ttgatccagc gcgcgacgtg ccggcgcagc agcccctcga cgaacagcgt
      661 catggcgagg gggagcgtgt tcgccggcag cagcatgagc gcgccgagca gccggtcgtc
      721 gtcgctgagc cagccgaagc cgcgcagcag cagcagcagg gccagcgcac tgatgaggaa
      781 ccccgtgcgc ttctccagcg cgctccgttc gcggcggcgg ccgagcgcgt agcggtagcg
      841 gatgagggtc acggcgccga cccacgtcac cagcacctcc accgattcct cgggggagct
      901 ggcggcgagc aggtcgagga ccgatgcgat cacgccatca tccgcgcgag gaagcggcgc
      961 gcgatgcgtt cgcgcaccca cgccacgggc ggcgttcttg gccgctccac ctcgagcgtc
     1021 cacggattga ggaagacgcc gcggtgcccg acgccggact cgcggccgag caggagcttg
     1081 accgcctcga aggccatcag cgtccccgtc tcgatcacca tcggcgcgaa cgacgggcgc
     1141 gtggtgcgtc ccgccaccag gtccgcggcg agggcgacgt cgatgtgatg cgcggagctc
     1201 gagtgcacca tgacgtagat cgcctcggcg atcttgcagg cgtcgatctg ggcggggagc
     1261 agcttgcgcc agtcggtgcc gacggtgggg aagccgagcc gctcctcggg gcggggatcg
     1321 agcgggccga cgaccgtcac cgatggcagc ggggcggtgt aggcgtcgat gaccgtggcg
     1381 ccgtgctcgc gcgccttccg gtagagggcg atgccggcgg cgagatcgtc catcccgttg
     1441 atgacgacgc ggtgcacggg caggatctcg tcgaggtgat ccgtccattc agggccgtac
     1501 gtcgtgaggg cgacgtcggg gttgatgcgc gtgagggcgg cgcaggtggc cgcgactttc
     1561 cggtgcccga gtgtgtcggt cgttgcgaag acctgacggt tgaggttcga cgtctcgaag
     1621 acgtcgagat cggcgagggc gaaatggccg acgccggcgc gcacgagcga ctggagcgcg
     1681 gcgcccccca tgccgccgac gccgcagacg aacacacgcc cgtgccgcag catctgctgc
     1741 tccgccggcg tgacgaagcc ggcgttgcgc gtcaccatct cggcgtacga gaagggcggg
     1801 agctccttca tcgctgcgcc ccgcgtccag cgtcccacgt cccgcgtttt cccccgagtg
     1861 ccggacggag gtcacccatc ggcgtatcgg cggcgaacca ctggagcacc ggcgcgacga
     1921 gcgactcgag cgccagcagc gcgaaggtgc gggtgaaggc gacgggcgag accgccggcg
     1981 acgaccgggt gaagaagcgg cgcgcggcgc cgagcgtcac ctggccgagc tggaggaagt
     2041 cgtcgccgcg gtcgtagtcg agcgcggtgc ggcaggcggc gttgtagacg tcgttgcgat
     2101 gcttcggcgc gtcgtcgaag cccttcttga ggttgtcgga cccgccggtg tacgcgttgc
     2161 ggatgatcgc ctgctgctcg tcgtacgtgg cgtcggggcc gacgccgaag acgtgccggt
     2221 gccgcgccat gatctgccgc gcgagatgca ggtggtcgta gctctgccgc gcgtcggcgt
     2281 tcggcgtggg atagacgtcg tcgaagctct cgctcaccat gccgaacaca gcgggcacct
     2341 gggtgacgtt gctgacccag agcgggcgca ggcgtcgccg cgcgaagagg aggaaggcgg
     2401 tgagcccgta cagcacgctc gagagcccgc cggcgcggtg cgccgggtcc accatgacga
     2461 ggccgaggtg gagcacttcg atcgggcgtc cgcgcagctc gcagtcgagg agggtgagcg
     2521 cgttgaaggc gacgggcagg ccggcacgat cgtagacgat ggtgat
//
LOCUS       DASSYW010000503         3148 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1068668, whole genome shotgun sequence.
ACCESSION   DASSYW010000503 DASSYW010000000
VERSION     DASSYW010000503.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3148)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3148)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3148
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1068668"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..852
                     /locus_tag="VFN38_08065"
     CDS             <1..852
                     /locus_tag="VFN38_08065"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HET9011757.1"
                     /translation="SPCPVLAVAEDCCETPRTVVVAIDFSAASLHAARQALPLLSDGA
                     VVHLVHAWRRHIPPVPTTRTDPFDDAYEHALPARFDLARAALGRERSLVFLCTATEGD
                     AATVVLDAARTLRADLVVAGAQGHGVVERLLVGSVSTALLRGAACSVLVAPEPPPAER
                     TRLERHMTGTSTIRAPEEWAEVLDAFSRRNRSRRTALEIDDVSLGSQVQESGYTLLGA
                     TYDHHDRHVSLMFADPVHPEAHLTRTLGKVRSVAVSQSDGGDDGALCIESEQGSTLLT
                     FLDRPAG"
     gene            complement(860..1639)
                     /locus_tag="VFN38_08070"
     CDS             complement(860..1639)
                     /locus_tag="VFN38_08070"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HET9011758.1"
                     /translation="MSAVQSESSRPGLVPFGTLSEICRELASRPYARRGVPPAEVPIR
                     VMLVDDHTIVRSGLRALLRTWPDITIVAEATNGEEAIQIAKRVQPQVILMDLDMPRTD
                     GATATRAIADVAPNSRVLILTMYPERERLVSLLGLGARGYLTKDVADRDLAEAIRVVA
                     AGDVYVRPAVAREIAASEEPVPAALSESRAGFSRLSDRERTVVGLTARGFNGPEIGRQ
                     LGITAKTVDTYKQRIEQKLGLTHRTDYVRFALDAQLLNAGR"
     gene            1868..>3148
                     /locus_tag="VFN38_08075"
     CDS             1868..>3148
                     /locus_tag="VFN38_08075"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HET9011759.1"
                     /translation="MRPDVIAPPTSRHAALIPDVSSARTGPVTVAVGQTVDGTLRAGA
                     LVAHRLGRGIAVISVIEPAAVYLWNTPSVPIPPSYEEDRSLSRWSYLEEQMRAAAMDG
                     PTWSVEVFWGGISRTVARAAHDLRAPLIVMGLGRHRPVDRLLGGETALRTIRQADCPV
                     LAVSSDFDALPRVVAAGTDFSYASAHALRAALPLLAPNATVHLVHVWQPAARFDLIGT
                     PYDERYRHELPGRIVRFTAALDLPKGVTLRTHVLEGRPADRLLAIAEDVGAELIVVGR
                     HGRGVLERLLVGSVATRVLRGATRSVLVVPEPAPGARLQLSARHGATTNVIAREEWAS
                     FLDRFTRHFAGRIVALDVNDPSRGLRTQERGSVLFGASYDPRENRLEIILGEPNGRRR
                     HLTRVIPDPSDMSALLSPAGDEEGIHVLHGTGEIL"
BASE COUNT          418 a         1132 c         1125 g          473 t
ORIGIN      
        1 tcgccctgtc ccgtgctcgc ggtcgcggaa gactgctgcg aaacgccgcg caccgtcgtc
       61 gtggcgatcg acttcagcgc ggcgagcctg cacgccgcgc gacaggccct tccgctcctc
      121 tcggatggcg cggtggtgca cctggtgcac gcgtggcgca ggcacattcc tcccgtgccc
      181 acgacgcgga ccgatccgtt cgacgacgcg tacgagcatg cgctgccggc gcggttcgat
      241 ctcgcccgcg ccgcgctcgg ccgcgagcgc tcgctggtgt tcttgtgcac cgccacggag
      301 ggcgacgcgg cgacggtcgt gctggacgcc gcgcgcaccc tgcgcgcgga tctcgtcgtg
      361 gccggcgcac aggggcacgg ggtcgtcgag cggctgctgg tgggcagcgt gtccacggcc
      421 ctgctgcgcg gcgcggcctg ctccgtgctc gtcgcgcccg agccgccccc cgccgagcgg
      481 actcgtctgg agcgccacat gacgggcacc tccaccatcc gcgcccccga ggaatgggcg
      541 gaggtgctcg atgccttcag caggcgcaac cggtcgcgac gcacggcgct cgagatcgac
      601 gacgtgtcac tgggctcgca ggtccaggag agcggataca cgctgctcgg tgccacctac
      661 gaccatcacg accggcacgt gtcgctcatg ttcgccgacc cggtccatcc ggaggctcac
      721 ctcacccgca cgctgggaaa ggtccggagc gtggccgtgt cgcagagcga cggcggcgac
      781 gacggtgccc tctgcatcga gagcgagcag ggaagcacgc tcctcacctt cctggatcgt
      841 ccggccggat agcgcggcgc taccggccgg cgttcaggag ctgggcatcg agcgcgaaac
      901 gcacgtaatc cgtgcgatgc gtcaagccga gcttctgttc gatgcgctgc ttgtacgtgt
      961 cgacggtctt ggccgtgatg ccgagctggc gcccgatctc cgggccgttg aagccgcgcg
     1021 ccgtgaggcc cacgacggtg cgttcccggt cgctcaggcg gctgaagccc gcgcgacttt
     1081 cgctcagcgc cgcgggcacc ggctcctcgg acgcggcgat ctcccgcgcg accgccgggc
     1141 gcacgtagac gtcgccggcg gccaccacgc ggatcgcttc cgcgaggtcg cggtcggcca
     1201 cgtccttggt gagatagccg cgcgctccga ggccgagcag cgagacgagg cgctcccgct
     1261 ccgggtacat cgtgaggatg agcacgcgcg agttgggggc gacgtcggcg atggcgcgcg
     1321 tggcggtggc gccgtcggtg cgtggcatgt cgagatccat caggatcacc tgcggctgga
     1381 cccgcttggc gatctggatc gcctcttcgc cgttggtggc ctccgccacg atggtgatgt
     1441 ccggccaggt gcggagcagc gcgcgcagtc cggagcgaac gatcgtgtga tcgtccacga
     1501 gcatcacgcg aatcgggact tcggcgggag gaacgccgcg gcgggcgtac ggccgcgagg
     1561 cgagctcgcg acagatctcc gagagcgttc cgaacgggac gagcccgggc ctggacgatt
     1621 cactctggac ggcggacatc gcttcctcct gcgcacgctt gcgcggcctg agatgcgccc
     1681 gagtaccaag tctagagccg gaaccggcct gcactgtcgg cagaactcct cgatctacat
     1741 acggacaact cccgacgatc gtggcgccgc ggcgctgtcc gacattgcct gatgcctccc
     1801 cgcgcccccg cgggcgagcc tggtgatgga tcggcacgtc gcttctcctc tcgatcgcag
     1861 gtgtgccatg cgccccgacg tcatcgcccc tcccacctcg cgccacgccg cactgattcc
     1921 cgacgtctcg tccgcacgca cgggtccggt gaccgtcgcg gtcggccaga ccgtggacgg
     1981 cacgctccgg gcgggggcgc tcgtcgccca tcggctcggg cgcggcatcg cggtgatctc
     2041 ggtgatcgag cccgccgccg tgtatctctg gaacacgccg agcgtgccga tcccgcccag
     2101 ctacgaggag gatcgaagcc tgtcgcgctg gagctatctg gaagagcaga tgcgcgccgc
     2161 ggcgatggat ggacccacct ggtcggtcga ggtgttctgg ggcggcattt cgcggaccgt
     2221 cgctcgcgcc gcgcacgacc tgcgcgcgcc gctcatcgtg atgggactcg gccgccaccg
     2281 cccagtggac cgtctgctcg gcggggagac ggcactgcgc acgatccgcc aggccgactg
     2341 cccggtgctc gccgtgagct cggacttcga cgcgctgccg cgggtcgtcg cggccggcac
     2401 cgacttcagc tacgcgagcg cgcacgcgct gcgcgccgcg ctgccgctcc tcgcgccgaa
     2461 cgccacggtg catctcgtcc acgtgtggca gcccgccgcg cgcttcgatc tcatcggcac
     2521 accctacgac gagcgctacc ggcacgagct gcccgggcgc atcgtccgct tcacggccgc
     2581 gctcgacctg cccaagggcg tcacgctgcg cacgcacgtg ctggaaggac ggcccgccga
     2641 tcggctgctg gcgatcgccg aggacgtggg cgcggagctg atcgtggtgg gacggcacgg
     2701 gcgcggcgtg ctcgagcgcc tgctggtggg gagcgtcgcc acgcgggtgc tgcggggcgc
     2761 cacgcggtcg gtgctcgtcg tgccggagcc ggcgccgggc gcgcgactgc agctctcggc
     2821 gcgtcatggc gccacgacga acgtgatcgc gcgcgaggag tgggcgtcgt tcctggaccg
     2881 gttcacccgg cacttcgccg gccgcatcgt cgcgctcgac gtgaacgatc cgtctcgcgg
     2941 ccttcggacc caggagcggg gctcggtgct gttcggggcc tcgtacgacc cgcgggagaa
     3001 tcggctggag atcatcctcg gcgagccgaa cgggcggcgg cggcatctca cgcgcgtcat
     3061 ccccgatccg agcgacatgt cggcgctact ctcgccggcc ggcgacgagg aaggcattca
     3121 cgtgctgcac ggcacgggcg agattctc
//
LOCUS       DASSYW010000504         2262 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_850260, whole genome shotgun sequence.
ACCESSION   DASSYW010000504 DASSYW010000000
VERSION     DASSYW010000504.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2262)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2262)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2262
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_850260"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..201
                     /locus_tag="VFN38_08080"
     CDS             <1..201
                     /locus_tag="VFN38_08080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011760.1"
                     /translation="DGEPSAMTQAERQVLAARGVTGVRLSCQIQCTHDMTVRAISRLT
                     GSGRPDPGPTPATEITPPPVWS"
     gene            complement(205..1236)
                     /locus_tag="VFN38_08085"
     CDS             complement(205..1236)
                     /locus_tag="VFN38_08085"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HET9011761.1"
                     /translation="MRKPVVLITGAGGEIGHGLIERLAGQSPRAIVTLDVARLEPEIA
                     PKVNSEITGSILDRGLLERVLAEFQVELVFHLAALLSTRAEFTPVTAHKVNVEGTLNL
                     LEFAQREAESHGRPVVFMYPSSIAAYGLPDLATKTRAGKVKEDEWALPTTMYGCNKLY
                     CEQLGRYYAQFYKQLAAERASGRVDFRCVRFPGLISAVTMPSGGTSDYAPEMMHAAAK
                     GEPYECFVRPDTRIPFMAMPDGVNALLQLATAPRERLTRTAYNVSAFNPSAGEIRDVV
                     LQAFPGATISWDTDTKRQSIVDSWPADVDDSAARRDWGFAPRYDFQSAFSDYLIPLIK
                     ERYRKPAGA"
     gene            complement(1293..2171)
                     /locus_tag="VFN38_08090"
     CDS             complement(1293..2171)
                     /locus_tag="VFN38_08090"
                     /EC_number="3.4.21.105"
                     /inference="COORDINATES: protein motif:HMM:NF013827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HET9011762.1"
                     /translation="MFKRQRTGSVVCASCGSLVGVNDDKCYNCGRRNPGLWGFGPMLR
                     AFGNDLGFVALVVYGCTALYGLGLLLTVMLGGDVMGGGSPMSILSPDGRALFILGASG
                     YEPIFTFGRWWTILSAGWLHAGVLHIFFNLLWVRQLGPATADIYGPGRMVIIYTVAGA
                     AGFLLTALAAYFLWWMPIPFLRGSPLTVGASAPVFGLLAALVYYGRRGGSSMIRTEAM
                     GYATVFFVMGFIIPGVDNYAHAGGFLGRYLASVWLDPLKPERMDHLVIAAVCLGLTAL
                     SIIASVLTALPLLRLR"
BASE COUNT          409 a          746 c          785 g          322 t
ORIGIN      
        1 gacggagagc cgtcggccat gacgcaggcc gagcgtcagg tgctcgccgc acggggcgtc
       61 accggcgtcc gcctctcgtg tcagatccag tgcacgcacg acatgaccgt gcgcgcgatc
      121 tcgcgtctca ccggcagcgg ccgccccgat ccggggccga cgcccgccac ggagattacg
      181 ccgccgcccg tctggagctg agcgtcaggc ccccgccggc ttgcgatagc gctccttgat
      241 gagcgggatc agatagtcgc tgaatgcgga ctggaagtcg tagcgcggcg cgaagcccca
      301 atcgcgccgc gccgcggagt catcgacgtc ggccggccac gaatcgacga tgctctggcg
      361 cttcgtgtcg gtgtcccacg aaatggtcgc gcccggaaag gcctgcagca cgacgtcgcg
      421 aatttctccg gccgacgggt tgaacgcgct gacgttgtac gccgtccgcg tcaggcgctc
      481 gcgcggcgcg gtcgccagct ggagcagtgc gttgacgccg tcgggcatcg ccatgaacgg
      541 gatgcgcgtg tccggacgca cgaagcactc gtacggctcc cctttcgccg ccgcgtgcat
      601 catctccggc gcatagtccg aggtgccgcc ggacggcatc gtcaccgccg aaatcaatcc
      661 tggaaagcgg acacagcgga agtcgacgcg cccgctcgcg cgctccgccg cgagctgctt
      721 gtagaactgc gcgtaatacc gtccgagctg ctcgcagtag agcttgttgc acccgtacat
      781 cgtcgtcggc aacgcccatt cgtcttcttt caccttgccg gcgcgcgtct tggtcgcaag
      841 gtcgggaaga ccgtaggcgg caatggacga ggggtacatg aacacgaccg ggcggccgtg
      901 cgactcggct tcacgctgcg cgaactcgag caggttcaac gtcccttcga cgttgacctt
      961 atgggccgtc accggcgtga actcggcgcg cgtcgacagc agcgcggcga gatggaacac
     1021 gagctcgacc tggaactcgg cgagcacgcg ctcgagcaga ccgcgatcga gaatcgagcc
     1081 ggtgatctcg ctgttgacct tgggggcgat ctcgggctcg aggcgggcga cgtcgagggt
     1141 gacgatggcg cgcggcgatt gaccggcgag ccgctcgatc agcccgtgcc cgatctcgcc
     1201 gccggcgccg gtaatgagga cgacaggttt gcgcacgagg ggaaattata gtgcgcacat
     1261 cgcggcccgg cgggtgcgcg gcgctgggtc gcctagcgga ggcgtaggag cggcagcgcg
     1321 gtgagcaccg aggcgatgat cgagagcgcc gtcaggccga ggcagaccgc cgcgatcacg
     1381 aggtggtcca tgcgctccgg cttcagcggg tccagccaca ccgacgccag atagcggccg
     1441 aggaagccgc cggcgtgcgc gtagttgtcg acgccgggga tgatgaagcc catcacgaaa
     1501 aacacggttg catagcccat cgcttccgtc ctgatcatgg agctgccgcc gcggcgtccg
     1561 tagtacacga gcgcggcgag gagcccgaaa accggcgccg aggcgccgac ggtcagcggc
     1621 gatccgcgca ggaacgggat cggcatccac cagagaaagt acgcggcaag cgcggtgagc
     1681 aggaagccgg cggcgccggc aacggtgtag atgatcacca tgcgcccggg cccgtagatg
     1741 tcggcggtcg cgggtccgag ctggcgaacc cacagcaggt tgaaaaagat gtgcagtacg
     1801 ccggcgtgca gccagccggc gctcagaatc gtccaccagc gcccgaaggt gaagatcggc
     1861 tcgtagccgc tcgcgccgag gatgaagaga gcccggccgt caggcgagag gatcgacatc
     1921 gggctgccgc cgcccatgac gtcgccgccg agcatcaccg tgagcagcag cccgagtccg
     1981 tacaacgccg tgcagccgta gacgacgagg gcgacgaagc cgaggtcgtt gccgaacgcg
     2041 cgcagcatcg gcccgaaacc ccacagcccc gggttgcgcc ggccgcagtt gtaacacttg
     2101 tcgtcgttga cgccgacgag cgagccgcac gaggcgcaga cgacagagcc agttcgctgc
     2161 cgcttgaaca tccgtcaaag catataacat gcgttcgatc atgaaggtgc tcgtcaccgg
     2221 cggcaccggc tatctcggaa gcgcgatcgt gcgcggactc gc
//
LOCUS       DASSYW010000505         2197 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_6888, whole genome shotgun sequence.
ACCESSION   DASSYW010000505 DASSYW010000000
VERSION     DASSYW010000505.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2197)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2197)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2197
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6888"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1014)
                     /locus_tag="VFN38_08095"
     CDS             complement(<1..1014)
                     /locus_tag="VFN38_08095"
                     /inference="COORDINATES: protein motif:HMM:NF012593.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:dicarboxylase symporter family
                     transporter"
                     /protein_id="HET9011763.1"
                     /translation="MRARAFFTSIYGQVLVATIVGVAVGHYFPDTGTAMKPFGDAFIK
                     LVRMIVGPIIFCTVVAGIAGAGGLKGLGRTGLVTLIYFEIVTTAALLIGLLVVNVIKP
                     GAGMNVDPTTLDTTSITQYVSAGRAQTVTDTLLSIIPSSPVDAFARTDILQVLFFSVL
                     FGIALNALGEKGRPVTEGVDRLAQVLFRIVGMIMHVAPLGAFGAMAFTIGSFGVRTLA
                     QLGALIASFWLTCVLFVVVVLGIVARLTGFSLWRFVRYIREELFVAFGTSSSETVLPR
                     LMSRLEDAGVDRSIVGLVVPAGYSFNLDGTAVYLSMATVFIAQATNTPLDLRHQVTLL
                     VILL"
     gene            1131..2180
                     /locus_tag="VFN38_08100"
     CDS             1131..2180
                     /locus_tag="VFN38_08100"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HET9011764.1"
                     /translation="MDRRHFLTALPALALAPHVAAQAAPASLKVRGLSQLTLTVSDVA
                     RSLKFYQDIFGMPIQARQGTTLFLRIGNGPQFLALKQAAAGERPSISAFGMGVDDFSV
                     DRVVRVLAEHGVSRAAGTDGAFQPMTVRVVPRPGHTAASGPPPADVYVADPSGIVFQL
                     HDPGYCGGGGTNGTDCRTVEASPAKGLLAVRDMSHFTVGVSDQPKTVAFYQGLVGADI
                     QSYQGTAPSYGIGPGVHFLMFIGGGPGRGGAPPAAPRIDHACMAMTGFDPAAVTKTLT
                     GYGLKPMPNASREPLVTYISLRMPNRGGADGGTPELYLTDPDGLAIQLQDVTYCGGAG
                     FQGDVCPANPVPNAR"
BASE COUNT          384 a          791 c          721 g          301 t
ORIGIN      
        1 cagcagaatg acgagcagcg tcacctgatg cctgagatcg agcggcgtgt tggtggcctg
       61 cgcgatgaac accgtggcca tcgacagata cacggcggtg ccgtcgagat tgaacgaata
      121 gccggccggc accaccagcc cgacgatgct gcggtccacg ccggcgtcct cgagccgcga
      181 catcagccgc ggcagcacgg tttccgatga tgacgtgccg aacgcgacga acagctcctc
      241 acggatgtag cgcacgaagc gccacaggct gaagccggtc aggcgcgcca cgatgccgag
      301 gaccacgacc acgaacagga cacaggtcag ccagaagctg gcgatcagcg cgccgagctg
      361 cgccagcgtg cggacgccga acgagccgat ggtgaaggcc atggcgccaa acgcgccgag
      421 cggcgccacg tgcatgatca tgccgacgat ccggaacagc acctgcgcca gccgatcgac
      481 cccttccgtg accggcctcc ccttctcgcc gagcgcgttc agcgcgatgc cgaagagcac
      541 cgagaagaag agcacctgca ggatgtcggt gcgcgcgaac gcgtccaccg ggctcgacgg
      601 gatgatcgac agcagcgtgt cggtgaccgt ctgcgcgcga cccgcgctga cgtactgggt
      661 gatcgacgtg gtgtcgagcg tcgtggggtc cacgttcatc ccggcgcccg gcttgatgac
      721 gttcacgacc agcagcccga tcaggagcgc ggccgtcgtc acgatctcga aatagatcag
      781 cgtcaccagg ccggtgcggc cgagcccctt cagcccgccg gcgccggcaa tgcccgccac
      841 cacggtgcag aagatgatcg gcccgacgat catccgcacc agcttgatga aggcgtcgcc
      901 gaatggcttc atcgcggtgc cggtgtccgg aaagtagtgg ccgacggcga cgccgacgat
      961 ggtggccacg agcacctggc cgtagatgga cgtgaagaac gcccgtgcgc gcatcgggcg
     1021 atgctatccc atgcggtacg tagccgccgg tccttagacc ggccctcaat aaaccatcaa
     1081 attctccgaa ggcggaacga ccacgcggcg cgcggtctac gataccgccc atggatcgac
     1141 gccactttct caccgccctg cccgctctcg cgctcgcacc ccacgtggcc gcgcaagccg
     1201 cgcccgcctc gctgaaggtg cggggcctca gccagctgac gctcaccgtc tccgacgtcg
     1261 cccgttcgct gaagttctat caggacatct tcggcatgcc gattcaggcg cgacaaggca
     1321 ccacgctctt cctgcgcatc ggcaacgggc cgcagttcct ggcgctcaaa caggccgcgg
     1381 cgggcgagcg cccgagcatc agcgccttcg gcatgggcgt ggacgacttc tccgtcgatc
     1441 gcgtggtgcg cgtgctggcc gaacacggcg tgtcgcgcgc cgccggcacc gatggcgcgt
     1501 tccagccgat gaccgtgcgc gtcgtgccgc ggcccggaca caccgcggcg agcggaccgc
     1561 cgcccgcgga cgtctacgtc gcggacccga gcggcatcgt gttccagctg cacgaccccg
     1621 gctactgcgg cggtggcggc accaacggca ctgactgccg caccgtggaa gcctcgcccg
     1681 ccaaagggct gctggccgtg cgcgacatga gccacttcac cgtcggcgta tcggaccagc
     1741 ccaagacggt ggcgttctat caggggctcg tgggcgccga catccagtcc taccagggca
     1801 cggcgccgtc gtacggcatc gggcccggcg tccatttcct gatgttcatc ggcggcggcc
     1861 ccggccgcgg cggggcgccg ccggcggctc cgcgcatcga ccacgcctgc atggcgatga
     1921 ccggcttcga tccggcggcg gtgacgaaaa cgctgaccgg atacggcctc aagccgatgc
     1981 cgaacgcgtc gcgcgagccg ctcgtcacct acatctcgct ccgcatgccg aaccgcggcg
     2041 gcgccgacgg cggcacgccg gagctctacc tcacggaccc cgacggcctc gccatccagc
     2101 tgcaggacgt cacctactgc ggtggcgccg gcttccaggg cgacgtctgc ccggcgaatc
     2161 ccgtcccgaa cgcgcgctga gaggggaaga caacgca
//
LOCUS       DASSYW010000506         2274 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_942002, whole genome shotgun sequence.
ACCESSION   DASSYW010000506 DASSYW010000000
VERSION     DASSYW010000506.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2274)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2274)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2274
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_942002"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            69..578
                     /locus_tag="VFN38_08105"
     CDS             69..578
                     /locus_tag="VFN38_08105"
                     /inference="COORDINATES: protein motif:HMM:NF044751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011765.1"
                     /translation="MARVLPVVFRWARLRSGAFRFVSELAISYRRSRAVSEGRPRLRS
                     GPRAGDRLPDAPVMRDGRAAFLQQELAGAAFHLLLCGPVERWDATSIKKLIDEHGRLL
                     AVRHLARVADGPDVLMDADGEAMERLGLRQSGDVAQYLVRPDGYVAFRCGGRDLAAVR
                     QYLARWQAP"
     gene            complement(593..>2274)
                     /locus_tag="VFN38_08110"
     CDS             complement(593..>2274)
                     /locus_tag="VFN38_08110"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="sigma-54-dependent Fis family transcriptional
                     regulator"
                     /protein_id="HET9011766.1"
                     /translation="LNASVRRMRADDLDHKELLELDPEGGVIRFAGQRALLLDAVAMG
                     LLRKYLVENFGLLAARTVLTQFGFAHGWRMAEAMQAEFKWNSDDDWQRAGTRIHALEG
                     LFRVEAGSKGPLSKEGVTLLASYEAEQHLLHFGRSEVPVCWTICGLTSGYVSRSTGTE
                     ISVLEDRCVGKGDAACHLIGRTRQEWGDERAEELRFFEAKRLKECLDVSLDRVTETLK
                     AAERKLRAHHRALVRVAPGVDEPLGIVAKSSAMRQVVDLARRVARVDSTVLITGESGS
                     GKERIARLLHDQSTRAAGAFIAVNCGAITETLLESELFGHARGAFTGATVGRPGLFEA
                     ANGGTLLLDEVGEVSPGMQVKLLRALQEREIRRVGENSSRRVDVRVVAATNRDLAHGV
                     AGGAFRQDLYYRLKVVELHVPALRERRDDILPLARVLLADAALRMKRKISGLTPGAAD
                     QLLRYEWPGNVRELENAMERAVALARGTRVELEDLPEEIRHAFPTPVATRGTVRPLDD
                     VEKDYILAALELNGGNQTHTAAQLRIGAATLYRKLKAYGLIGRKRAARRRG"
BASE COUNT          299 a          834 c          779 g          362 t
ORIGIN      
        1 gggcgttcag cctcttcaca cgggtcatgt cggcgggccg tgtagcggcc tggattcggc
       61 gcacgatcgt ggcgcgggtc ctgcccgtgg tgttccgctg ggcccggctg cggtcggggg
      121 cattccgctt cgtctcggag cttgcgatct cataccgccg cagccgggcg gtctcggagg
      181 gcaggccgag gctgcggtcg gggccgcgcg ccggcgaccg gttgcccgac gcccccgtca
      241 tgcgcgacgg ccgagccgcg ttcctgcagc aggagctggc tggtgccgct tttcacctcc
      301 tgctgtgtgg tcccgtcgaa cggtgggatg ccacgtccat caagaagttg atcgatgaac
      361 acgggcgcct gctcgccgtg cgccatctgg cgcgcgtcgc cgacgggccc gacgtcctga
      421 tggatgccga cggtgaagcc atggaacgcc tcggcctgcg acagtccggg gacgtcgctc
      481 aatacctcgt gcgcccggac ggctacgtcg catttcgatg cggcggtcgc gatctcgcag
      541 ccgtgcgcca gtatctcgcc cgatggcagg caccctaggt cgcgcgacgg cgtcaacccc
      601 gcctgcgcgc cgcgcgcttg cgaccgatca ggccgtacgc cttgagcttg cgatagaggg
      661 tcgccgcgcc gatgcggagc tgcgccgcgg tgtgcgtctg gttgccgccg ttcagctcca
      721 gcgccgcgag gatgtagtcc ttctcgacgt cgtcgagtgg ccgcaccgtg ccgcgggtgg
      781 ccaccggcgt cggaaacgca tggcgaatct cctcgggcag gtcctcgagc tcgacccgag
      841 ttccgcgtgc gagcgccacc gcgcgctcca tcgcgttttc gagctcgcgc acgttgcccg
      901 gccactcgta acgcagcagc tgatcggcgg cgcccggcgt gaggccggag atcttgcgct
      961 tcatgcgcag cgccgcgtcc gcgagcagca cccgcgcgag cggcaggatg tcgtctcggc
     1021 gctcgcgcag cgcgggaacg tgcagctcga cgaccttgag ccggtaatag aggtcctggc
     1081 ggaaggcgcc gcccgcgacg ccgtgggcga gatcgcggtt ggtcgcggcc acgacgcgca
     1141 cgtcgacgcg tcggctggag ttctcgccga cccggcggat ctcccgttcc tgcagggccc
     1201 ggagcagctt gacctgcatg cccggcgaca cctcgccgac ctcgtcgagc agcagcgtcc
     1261 cgccgttcgc cgcctcgaac aggccgggcc ggccgacggt cgcgcccgtg aaggcgccgc
     1321 gcgcgtgccc gaacagctcg ctctcgagca gcgtctcggt gatggcgccg cagttgacgg
     1381 cgatgaacgc cccggccgcc cgcgtggact ggtcgtggag gagccgggcg atccgctcct
     1441 tgcccgagcc gctctcgccg gtgatgagca cggtcgaatc gaccctggcc acgcggcgcg
     1501 ccaggtcgac gacctgccgc atcgcggagc tcttggcgac gatccccagc ggttcgtcca
     1561 cgcccggcgc cacgcgcacg agcgcgcggt ggtgcgcgcg cagcttccgc tcggccgcct
     1621 tcaacgtctc tgtcacccgg tcgagcgaca cgtcgaggca ctccttcagc cgcttcgcct
     1681 cgaagaagcg cagctcctcg gcgcgctcgt caccccactc ctggcgcgtg cggccgatca
     1741 ggtggcaggc cgcgtccccc ttgcccacgc accggtcttc caggacggag atctccgtgc
     1801 ccgtgctgcg gctgacgtag ccgctcgtga gcccgcagat cgtccagcag accggcactt
     1861 cggagcgccc gaagtgcagc aggtgctgct ctgcttcgta cgaggcgagc agcgtcaccc
     1921 cctccttgga gagcggtccc ttgctgccgg cctccacgcg aaacaggcct tcgagcgcgt
     1981 ggatgcgggt gcccgcgcgc tgccagtcgt catcgctgtt ccacttgaac tccgcctgca
     2041 tcgcttcggc catgcgccag ccgtgcgcga agccgaactg ggtgagcacc gtgcgggccg
     2101 cgagcaggcc gaagttctcg accaggtact tgcgcagcag acccatcgcc accgcgtcga
     2161 gcagcaacgc gcgctgtccg gcgaaccgga tcacgccccc ctccgggtcc agctccagca
     2221 gctccttgtg gtccagatcg tccgcgcgca tgcgacggac gctagcattc aaat
//
LOCUS       DASSYW010000507         2335 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1579430, whole genome shotgun sequence.
ACCESSION   DASSYW010000507 DASSYW010000000
VERSION     DASSYW010000507.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2335)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2335)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2335
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1579430"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2304
                     /locus_tag="VFN38_08115"
     CDS             <1..2304
                     /locus_tag="VFN38_08115"
                     /inference="COORDINATES: protein motif:HMM:NF013713.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011767.1"
                     /translation="PLLAFAALELLTAVSALCVEPLLRAMQPVFASLYDGSAGSPVLQ
                     LTLRVGVAIAAVLVPATCMGGTLPVLAQLVAARAESLGVRAGGLYAVNTLGAALGALT
                     IPALLLPSLGATGALAAVVTTNVLIAAGALILARRPEARPPDAKAVRTVRREKGRSVR
                     SRTLGLAFVSGAITLGLEALATRAFSLVHENSVYSFATVVAVFLAGLAGGAALARAAL
                     RRGISARGLVAIGWASAGAWMVMLPAMFVRITGLDYIAGGRLLAHEAHLAALVVAALL
                     APSVLLGLALPALMQEEGEATRQGGRAVGAVLAANTGGAILGPLLAVFALAPATGLWT
                     AVSLLGALSIAGAAISSRGAGRAVRRMLAAAIAISTVTWLIVPPNSLPRIKLSGSDSL
                     LDLREGAFGSVAVVAHDGQRRIKLNNFYVLGGSAAAGDERLQGHIPLLLHSRPGRVVF
                     LGLGTGISLSAIRFHPVREALALELVPEVASAARDWFGEANLDVLQDPRVRVRAEDAR
                     SYVGATRERFDVVVGDLVVPWRRGESSLYTRDSFEAVRRVLAPGGLYCQWVPLYQISE
                     AEFDSIAASFLDVFPRTTLWRGDFSAGQAAVGLIGHTDPRGLDAALADARSRALAATP
                     DHRNPYLSDPAGLWLYFVGPLDPGEQQFRSAPRNRDGSPWVELASPRLHLRIEGGAAS
                     AFVGRPLQARLDRIRSLPLAGTAAASLRAEHLEWRDRGAEIWEASLLSFEGDNAGADR
                     LGLSALARLPAAIQAAVLGGPVPERSR"
BASE COUNT          265 a          825 c          832 g          413 t
ORIGIN      
        1 ccgctattgg cgtttgcggc gcttgaactc ctcaccgctg tctcagctct gtgcgtcgag
       61 ccgctcctcc gcgcgatgca gcccgtcttc gcgtcgctct acgacggttc ggccgggagc
      121 cctgttctcc aactgacgtt gagagtcggc gtcgcgatcg ccgcggtcct cgtgccggcg
      181 acctgcatgg gcggaacgct gcccgtgctt gcgcaactgg tcgcggcgag ggccgagtcc
      241 ctgggcgtcc gcgcgggtgg cctgtacgct gtcaacacgc tgggtgccgc gctcggcgcc
      301 ctcacgatcc cggctctcct gctgccgtct ctcggcgcca ccggtgcgct cgccgcggtc
      361 gtgacgacca acgtcctgat cgcggccggt gcgctgatcc ttgcgcggcg gccggaagcg
      421 cgaccgccgg acgccaaggc agttcgcacg gtccgacgag agaaggggcg gtcggtgcgc
      481 agccgcacgc tggggctggc gttcgtctcc ggcgcgatta cgttgggtct cgaagcgctg
      541 gcgacgcgcg ctttttcgct cgtgcacgag aactccgtgt actcgtttgc gaccgtcgtc
      601 gccgtgttcc tcgccggcct cgccggcggg gcggccctgg cgcgggcggc gctgcggcgt
      661 gggatcagcg cgcgcggact cgtcgccatc ggctgggcga gcgccggtgc gtggatggtg
      721 atgctgccgg cgatgttcgt gcgaatcact ggtctcgact acatcgcggg gggacggctc
      781 ctcgcgcacg aggcccatct tgccgccctc gtcgtggcgg cgctgctggc gccgagcgtc
      841 cttctgggcc tggcgctgcc cgcgctgatg caggaggaag gtgaggccac ccggcaaggc
      901 gggcgcgccg tgggcgccgt cctcgctgcc aacaccggcg gcgcgatcct gggaccgctt
      961 ctcgccgttt tcgcgctcgc gccggcgacc ggtctctgga ccgccgtcag tctcctcggc
     1021 gcgctctcga tcgcaggcgc ggcgatttca tcccgaggtg cgggccgcgc ggttcgccgg
     1081 atgctcgcgg ccgccatcgc gatttcgacc gtcacgtggc tgatcgtgcc gcccaactcg
     1141 ttgccgcgaa tcaagctctc cggcagcgac agcctgctcg atctgcgcga gggcgccttc
     1201 ggcagcgtcg ccgtcgtggc gcacgacggg cagcggcgca tcaaactgaa caacttctac
     1261 gtgctgggcg gcagcgccgc cgccggagat gaacgcctgc aggggcacat tccgctgttg
     1321 ctccattcgc ggcccgggcg cgtcgtcttc ctcggactcg gcaccggcat ctctctcagc
     1381 gcgatccggt ttcatccggt ccgcgaggct ctggccctgg agctcgtgcc cgaggtggcc
     1441 tccgcagcgc gcgactggtt cggcgaggcg aacctggacg ttctccagga tcctcgcgtg
     1501 cgcgtgcgcg cggaggacgc gcgcagctat gtcggagcga cgcgcgagcg cttcgacgtc
     1561 gtcgtcgggg atctcgtcgt cccgtggcgg cgtggcgaat cttcgctcta cacgcgggac
     1621 agcttcgaag cggtgcgacg cgtgctggcg cccggcgggt tgtactgcca gtgggttccc
     1681 ctctaccaga tttcggaggc cgaattcgac agcattgcgg cgtcgttcct cgacgtcttc
     1741 ccacgcacca cgctgtggcg aggggacttc agcgccggac aggcggcggt cggcttgatt
     1801 ggtcacacgg atccgcgcgg gctcgatgct gcgctggccg atgcccgctc gcgcgcgctc
     1861 gcggcaaccc cggaccaccg caatccctac ctctcggatc cggccgggct gtggctgtac
     1921 ttcgttggtc cgctcgaccc gggggagcag caattccggt cggcgccccg caaccgcgac
     1981 ggcagtccgt gggtcgagct cgcgagtccg cggctgcacc tccgcatcga gggcggagcc
     2041 gcgtcggcct tcgtcggccg gcccttgcag gctcgtcttg acaggatccg atcgcttccc
     2101 ttggcgggca cggcggccgc gtcgctccga gccgagcacc ttgaatggcg cgaccgcggc
     2161 gcggagatct gggaagcgtc gctgctgtcg ttcgagggag acaacgccgg cgccgacagg
     2221 ttgggcttgt cagcgctggc ccgcctgccc gccgcaatcc aggccgcagt gttaggaggt
     2281 ccggtcccgg agaggtcgcg ctgagggcat ctgcctcctg ccggatgtct ggcac
//
LOCUS       DASSYW010000508         4113 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1164805, whole genome shotgun sequence.
ACCESSION   DASSYW010000508 DASSYW010000000
VERSION     DASSYW010000508.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4113)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4113)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4113
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1164805"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1196)
                     /locus_tag="VFN38_08120"
     CDS             complement(<1..1196)
                     /locus_tag="VFN38_08120"
                     /inference="COORDINATES: protein motif:HMM:NF013560.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008241 - peptidyl-dipeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M2 family metallopeptidase"
                     /protein_id="HET9011768.1"
                     /translation="MKRTIMWGVAALAVAVASCRTPRQAPADTSDPATFLKDANDSLL
                     RLVIESQQAGWVAQTYITPDTEAIDARATAALATAQTGLAKRAATLPTASLSPDQLRQ
                     VTVLKNTLTMAAPEDAKEAEELAQLVSEMRGMYGRAKSCPAGASGDACLDVEGVTKVL
                     AESRDPKRVREVWEGWHAAAQPMKAKYTRFVELSNKGARTLGYADTGVMWRSRYDMEA
                     DAFSAEFERLWTQLRPLYQSLHAYVRTRLHAKYGDAVPAGGPIPAHLLGNIWAQDWSN
                     VFDLAKPAGAGSGVPLDSILKSRKVSAVDMTRYAEGFFVSLGMPKLPQTFWDRSLLVK
                     PRDRDVVCHASAWAINFVDDLRIKMCIDPTAEDFSTLHHELGHDYYFLAYNTLPPILR
                     DGANDG"
     gene            complement(1211..2629)
                     /locus_tag="VFN38_08125"
     CDS             complement(1211..2629)
                     /locus_tag="VFN38_08125"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HET9011769.1"
                     /translation="MIDPIRWWHSHNVRMRLTVWYVAAMVVVLAVYAGAIYTFVSRSV
                     SESLDQRLRADFFWAAASVDLDADGEVVMTTPQVDLLLEEEPWVQVWSASGGELLHGN
                     AEARRRPIAATQQLAATGQDRTATFDVGGVPMRVLSRRSYIGQSPVIVQVGRSEEPMW
                     QQMRDLLLVLLLGLPLAVGVAGLGGYVLARRALAPIEQMTERARSITAERLSDRLPVK
                     HPDDEMGRLASVFNETLARLEGSFAQMRQFTADVSHELRTPLTSIRSVGEVGLRGQRD
                     EHAYRGIIESMLEEVDRLAGLVDRLLTLSRAETGQAALSREIVHLQALAEEVVQHLSV
                     LAEEKQQQIVVERRAAPDALADKQVLRHALINLVDNAIKFTPRGGSVRIRISETPTSA
                     IFDVIDTGPGVPEAARAHIFDRFYRADESDGVHGAGLGLSIAKGAVEANGGRLTLEAS
                     TPAGSTFRITMPRVAPARRQAG"
     gene            complement(2626..3309)
                     /locus_tag="VFN38_08130"
     CDS             complement(2626..3309)
                     /locus_tag="VFN38_08130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013804409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HET9011770.1"
                     /translation="MRVLVVEDEQKVANALREGLEGEKYDVVVERTGEGAFFRVTTET
                     FDIILLDLGLPGRSGLEILTALRERGLKTPVLVLTARDSVQDRVSGLDGGADDYLVKP
                     FAFAELVARIRALVRRGRSADSPRLALADLDMDLVTRKVTRAARPIDLTVREFELLEY
                     LLRHHGQVVSREALARDVWRETARTTPLDNVIDVHIARLRRKVDVEPAVKLIHTVRGV
                     GFMLREGEP"
     gene            3481..4098
                     /locus_tag="VFN38_08135"
     CDS             3481..4098
                     /locus_tag="VFN38_08135"
                     /inference="COORDINATES: protein motif:HMM:NF013247.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class IV"
                     /protein_id="HET9011771.1"
                     /translation="MGFSLLETMRLERGLIVRRDRHVARAAGAAAELGFAWNVAAANA
                     ALDAAVSAHADGAWRTRLLVSRAGDATVECTPLVHDESRVWRVGLAAEPVDSGDPALR
                     VKTTRREIYERAKEARPDLDDVILWNERGEITESTIANVVAEIDNNWWTPPVSCGLLP
                     GVFRAAVIEADMVREHVITKDDLRRATRLWLINSLREWVKATLVS"
BASE COUNT          613 a         1466 c         1395 g          639 t
ORIGIN      
        1 aagccgtcgt tggcgccgtc acgcaggatc ggcggcagcg tgttgtaggc caggaagtag
       61 tagtcgtgac cgagctcgtg gtgcagcgtc gagaagtctt cggccgtcgg atcgatgcac
      121 atcttgatcc ggaggtcgtc cacgaaattg atcgcccatg cgctggcgtg gcacaccacg
      181 tctcgatcgc gcggcttcac caggagcgag cgatcccaga acgtctgcgg cagtttcggc
      241 atgccgagcg acacgaagaa cccttcggca tagcgggtca tgtccaccgc cgacaccttc
      301 cgggacttga gaatcgagtc cagcggtacg ccagaccccg cgcctgccgg cttcgcgaga
      361 tcgaagacgt tcgaccagtc ctgcgcccag atgttgccca gcaggtgcgc cggaatcggt
      421 ccgccagccg ggacggcgtc gccgtatttg gcgtgcagac gcgtccgcac gtaggcgtgc
      481 agcgattgat acagcggacg cagctgcgtc cagagccgct cgaactcggc ggaaaaagcg
      541 tccgcctcca tgtcgtagcg cgatcgccac atgacgcccg tgtcggcgta gcccagggtc
      601 ctggcgccct tgttcgagag ctcgacgaag cgggtgtact tcgccttcat cggctgcgcc
      661 gcggcgtgcc acccctccca cacctcgcgc acgcgcttgg ggtcgcggct ctcggccagc
      721 accttcgtga cgccctccac gtccaggcac gcgtcgccgg aggcgccagc ggggcacgac
      781 ttcgcgcgcc cgtacatgcc gcgcatctcg gagacgagct gggcgagctc ctccgcttcc
      841 ttcgcgtcct cgggcgccgc catcgtcagc gtgttcttga gcaccgtcac ctgacgcagt
      901 tgatccggcg acaacgacgc ggtcggcagc gtggcggcgc gcttggccag gccggtttgc
      961 gccgtcgcca acgcggcggt tgcccgtgcg tcgatcgctt cggtgtcggg cgtgatgtag
     1021 gtctgcgcca cccagcccgc ctgctgcgac tcgatcacga gacgcagcag cgagtcgttg
     1081 gcgtccttga ggaacgtggc gggatcggat gtgtccgcgg gcgcttggcg cggcgtgcgg
     1141 cacgatgcga ccgcaaccgc cagcgccgcg actccccaca tgatggttcg cttcatcgct
     1201 tctcccaatc tcaacccgct tgccgccgcg ccggagccac gcgcggcatg gtgatgcgga
     1261 acgtgctgcc cgccggagtc gacgcttcga gcgtcagccg gccgccgttg gcctccacgg
     1321 ctcctttggc gatcgacagg ccaagacccg ccccgtgcac gccgtcgctt tcgtcggcgc
     1381 ggtagaagcg gtcgaagatg tgggcgcggg cggcctcggg aacgcccggg ccggtgtcga
     1441 tcacgtcgaa gatcgccgag gtcggcgtct ccgaaatacg aatccgcacg ctgccgccgc
     1501 ggggcgtgaa cttgatggcg ttgtccacca ggttgatgag cgcgtgccgc agcacctgct
     1561 tgtccgcgag cgcgtccggc gcggcgcgcc gctcgacgac gatctgctgc tgcttctctt
     1621 cggccagcac gctgaggtgc tgcacgactt cctcggccag cgcctgcagg tggacgatct
     1681 cgcgcgacag cgccgcctgc cccgtctcgg cgcgcgacag cgtcagcaaa cgatccacga
     1741 ggcccgcgag gcgatcgacc tcctcgagca tgctctcgat gatgccgcga tacgcgtgct
     1801 cgtcgcgctg gccgcgcagc cccacctcgc cgacgctgcg gatcgacgtc agcggcgtgc
     1861 gcagctcgtg cgagacgtcg gcggtgaact gccgcatctg cgcgaagctc ccctcgagcc
     1921 gcgccagcgt ctcgttgaac accgacgcca gccgccccat ctcgtcgtcc gggtgcttca
     1981 ccggcaggcg gtccgacagc cgttcggcgg tgatcgagcg cgcgcgctcc gtcatctgct
     2041 cgatcggggc gagcgcgcgg cgcgccagca cgtagccgcc aaggcccgcc acgccgacgg
     2101 ccagcggcag gccgagcagc agcaccagca gcaggtcgcg catctgctgc cacatcggct
     2161 cttcggaccg ccccacctgc acgatgaccg ggctctggcc gatgtagctg cgccggctga
     2221 gcacgcgcat cggcacgccg ccgacgtcga acgtcgcggt gcgatcctga ccggtggccg
     2281 ccagctgctg cgtggccgcg atgggacggc ggcgcgcctc ggcgttgccg tggagcagct
     2341 cgccgccgct cgcgctccac acctgcaccc acggctcttc ttcgagcagc aggtccacct
     2401 gcggcgtggt catgacgacc tcgccgtccg cgtcgagatc gacgctggcc gcggcccaga
     2461 agaagtcggc gcgcaagcgc tgatcgagcg actcggagac gctgcggctc acgaacgtgt
     2521 agatggcgcc ggcgtagacc gccagtacca ccaccatggc ggcgacgtac cacaccgtca
     2581 gccgcatgcg gacgttgtgg gagtgccacc agcggatcgg atcgatcacg gctcgccttc
     2641 gcggagcatg aagccgacgc cgcgcacggt gtgaatcagc ttcacggccg gctccacgtc
     2701 caccttgcgg cgcagccgcg cgatgtggac gtcgatgacg ttgtcgagcg gcgtggtgcg
     2761 cgcggtctcg cgccacacgt cgcgcgccag cgcctcgcgc gacaccacct ggccgtgatg
     2821 ccgcagcagg tattcgagca gctcgaattc gcggaccgtg agatcgatcg gccgggcggc
     2881 gcgcgtcacc ttgcgcgtca ccaggtccat gtcgaggtcc gcgagcgcca gccgcggcga
     2941 gtcggcagag cggccgcggc gcaccagcgc gcggatgcgc gccaccagtt cggcaaacgc
     3001 gaacggcttc accaggtagt cgtcggcgcc cccgtcgagc ccgctcacgc ggtcctgcac
     3061 cgaatcacgc gccgtcagca ccagcaccgg cgtcttcagc ccgcgctcgc gcagcgccgt
     3121 caggatctcg aggccgctcc gccccggcag gccgaggtcc agcaggatga tgtcgaaggt
     3181 ctcggtggtc acccgaaaga acgccccttc gccggtgcgt tccaccacca cgtcgtactt
     3241 ctcgccttcc agcccttcac gaagggcgtt ggccaccttt tgttcatcct cgacgacgag
     3301 cacgcgcatg ccggacacga tccggattct agcgaggctc cgcctcgcta gaacgccgtc
     3361 taattgcccg ccctccgggc gggcgtagac gtctcgaacg gcaatgtcgc ggcttgcgtc
     3421 gttcgagaac ctcctcgcgg ccaacctttc tcgccgttcg agccgtctag aatgcgggcg
     3481 atggggttct cgctgctcga gaccatgcgg ctcgaacggg ggctgatcgt ccggcgcgac
     3541 cgccacgtgg cgcgggcggc cggtgcggcc gccgagctcg gattcgcgtg gaacgtggcc
     3601 gccgcgaacg cggcgctcga cgcggcggtg tccgcccatg cggacggcgc ctggcgcacg
     3661 cggctgctgg tgtcgcgggc cggcgacgcg acggtggagt gcacgccgct cgtgcacgac
     3721 gagtcgcgcg tgtggcgcgt gggcctggcc gccgaaccgg tcgactcggg cgatccggcg
     3781 ctccgcgtca agacgacgcg acgcgagatc tacgagcgcg ccaaagaagc gcggcccgac
     3841 ctggacgacg taatcctctg gaacgagcgc ggcgagatca ccgagtccac gatcgcgaac
     3901 gtcgtcgccg agatcgacaa caactggtgg acgccgcccg tgtcgtgcgg gctgcttccc
     3961 ggcgtcttcc gtgcggccgt gatcgaggcg gacatggtgc gtgagcacgt gatcacgaag
     4021 gacgatcttc gccgcgcgac gcgcctgtgg ctgatcaaca gcctgcgcga gtgggtcaag
     4081 gcgacgctgg tgtcttgagg ccggtctcaa gac
//
LOCUS       DASSYW010000509         2325 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_722699, whole genome shotgun sequence.
ACCESSION   DASSYW010000509 DASSYW010000000
VERSION     DASSYW010000509.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2325)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2325)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2325
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_722699"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..743)
                     /locus_tag="VFN38_08140"
     CDS             complement(<1..743)
                     /locus_tag="VFN38_08140"
                     /inference="COORDINATES: protein motif:HMM:NF021778.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YncE family protein"
                     /protein_id="HET9011772.1"
                     /translation="MPSPALRFSVGLTLCFVTACGGAASTSRAGETPRAAADVTNRLP
                     TGVRLDPAATQHRVGQMPLAMVDAPEGDRVVLLLNGWRDAGIQVVERGTGRVLQTLPL
                     PAAFLGLAFSPDGRALYASGGNGDVVYRFDWRDGSAALRDSVVLAQRARPRADGVRYP
                     AGLAFSRDGRWLYVAENLADSMAVVDVASGRVVQRVATDRYPYGVAVAPDGSVYVSNW
                     GGWHVSSFAPDSAGALRSTGRLFVGRHPSA"
     gene            832..2097
                     /locus_tag="VFN38_08145"
     CDS             832..2097
                     /locus_tag="VFN38_08145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011773.1"
                     /translation="MGFRRLRASATLLFTMLLGAPPTGAQHAPHGEHAAAQDREGTKV
                     MAQAIPLVTHAAPTPGGVSRTEVALTQTIVMAKTGRWRDRFAVEATLDAEGLTMPRGE
                     LTLGAFGEGFVDRRHPHTWLHELMLVSFAEAGPALFSVGVGRGFVPFGTDDPMVRPFV
                     KYPVNHHLAQILERGMATAAARIGFAALEVATFTGEEPQNPSSLPLARRFGDSWSVRA
                     TLFPAPGLELQSSHARVSSPEVPDGFGLDQRKRSVSARLGTQDGGRYALAEWARTVEH
                     DHARRLDAFAYESALLEVATPVGPVRGALRFEQTDRPEEERLSDPFRTARPATDLHIV
                     GVTRWRTATMNLTARPVTQGPVAGTFFIELARLSATSRDAVTTFDPATFYGGRGFWSL
                     TLGVRLRTGHGHDRMGRYGVASDPSRHGE"
BASE COUNT          348 a          820 c          825 g          332 t
ORIGIN      
        1 gccgagggat gacgccccac gaacaggcgc ccggtgctgc gcagcgcgcc ggccgagtcg
       61 ggcgcgaagc tgctgacgtg ccagccgccc cagttcgaga cgtacacgct tccgtcgggt
      121 gcgacggcca cgccatacgg ataccgatcg gtggccacgc gctggaccac ccgcccgctc
      181 gcgacgtcga ccaccgccat cgagtcggcc aggttctcgg cgacgtacaa ccatcggccg
      241 tcgcgagaga acgcgaggcc cgccgggtat cgtacgccat ccgcacgcgg gcgagcacgc
      301 tgcgccagca ccacgctgtc gcgcagcgcg gccgagccat cgcgccagtc gaaccggtag
      361 acgacgtccc cgttgcctcc ggaagcgtag agcgcgcgtc cgtcgggaga gaatgcgagg
      421 ccgaggaatg ccgcgggcag gggcagcgtc tggagcacgc gaccggtacc ccgctccacg
      481 acctggatgc cggcgtcgcg ccatccattg agcagcagca cgacgcgatc gccttcgggc
      541 gcgtctacca tcgcgagcgg catctgtccc acgcgatgct gcgtcgcggc cggatcgaga
      601 cgcacgccgg tgggaagtcg attggtgacg tcggcggcgg cgcggggtgt ctcgccggcg
      661 cgcgacgtgc tcgcggcgcc gccgcatgcc gtgacgaagc acagcgtgag tccgacgctg
      721 aaccggaggg cgggcgaagg catcgtcgat ggcggagggg gtggtcggtg cgagccgaaa
      781 agctatggag cgcgcgcgcg atccgcacca cccggcgatt agcttccgcc gatgggcttt
      841 cgccgtctcc gcgcgtccgc cacgctgctg ttcaccatgc tgctcggcgc gccgccgaca
      901 ggcgcgcagc atgcgccgca cggcgagcat gcggcggcgc aggaccgcga gggcacgaag
      961 gtgatggccc aggcgatccc actcgtgacg cacgccgcgc ccacgccggg cggggtgtcg
     1021 cgcaccgagg tggcgctgac ccagaccatc gtcatggcga agacaggtcg atggcgtgac
     1081 cggttcgccg tcgaggccac gctcgatgcc gaaggcctca ccatgcctcg cggcgagctg
     1141 actctcggcg cattcggcga gggcttcgtc gatcggcgcc atccgcacac ctggctccat
     1201 gagctgatgc tcgtgagctt cgctgaagcc ggaccggccc tgttctccgt cggcgtgggg
     1261 cgtgggttcg tgccgttcgg caccgacgac ccgatggtgc gtccgttcgt gaagtatccc
     1321 gtcaaccacc atctcgcgca gatcctcgag cgcggcatgg cgaccgctgc tgcacgcatc
     1381 gggttcgccg ccctcgaggt ggccacgttc acgggcgagg agccgcagaa cccttcctcg
     1441 ctgccgctcg cgcgccgatt cggcgactcg tggtcggtgc gcgccacact gtttcccgct
     1501 ccagggctcg agctccaatc gagtcatgcg cgagtgtcct cgcccgaggt acccgacggc
     1561 ttcggtctcg atcaacgcaa gcgcagcgtg tcggcacgcc tcggcacgca ggacggcggt
     1621 cgatacgcgc tggccgagtg ggcccgcacc gtcgaacacg atcatgcgcg tcgcctggac
     1681 gccttcgcct atgagagcgc actgttggag gtcgccacgc cggtcggccc ggtgcgcggg
     1741 gcgctgcggt tcgaacagac cgatcgcccg gaggaagagc gcctgtccga cccattccgg
     1801 acggcacgac cggcgaccga ccttcacatc gtgggcgtca cgcggtggcg cacggcgacg
     1861 atgaacctca ccgcgcggcc ggtgacgcag ggtccggtgg ccgggacttt cttcatcgag
     1921 ctggcgcggc tgtcggccac gtcgcgtgac gccgtgacga ccttcgatcc ggccacgttc
     1981 tatggcggcc gaggcttctg gtcgctcact ttgggcgtgc gcctgcggac cggccatgga
     2041 cacgaccgca tggggcggta cggcgtcgca tccgatccgt ctcgacatgg agagtagagt
     2101 ggggaaaacg ccgatgattg caggcgacgc gggccacgtc gcgtcgctcg ggacgaggag
     2161 ttgagcatgg cgcgaatcac gagtcgatca gcgagcgtcg caacgacgtc cgccctcctg
     2221 ctcgccctgg ccgcgtcctg tggcggcgac gagcccagcg caccctccgc cacgccggag
     2281 ggacgcggtg atttccggcc cgcccgcacg acggcggagg tcgcg
//
LOCUS       DASSYW010000510         2203 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1205740, whole genome shotgun sequence.
ACCESSION   DASSYW010000510 DASSYW010000000
VERSION     DASSYW010000510.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2203)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2203)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2203
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1205740"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..451)
                     /locus_tag="VFN38_08150"
     CDS             complement(<1..451)
                     /locus_tag="VFN38_08150"
                     /inference="COORDINATES: protein motif:HMM:NF024206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HET9011774.1"
                     /translation="MRVGAFVGVAVLALSVSIAAAAKSPVADAAMSGDAAAVQKLLTQ
                     KADVNAPQVDGGTALHWAVYRDDLELADILLRAKANVKAANRVGMTPLAMAALYGRPA
                     MIDRLLKAGADAKELSANGETTVMLAARNGNPAAVKLLIEAGADVNAR"
     gene            complement(504..1907)
                     /locus_tag="VFN38_08155"
     CDS             complement(504..1907)
                     /locus_tag="VFN38_08155"
                     /inference="COORDINATES: protein motif:HMM:NF019222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1552 domain-containing protein"
                     /protein_id="HET9011775.1"
                     /translation="MFITKKHIPRRTFLQGAGVTLALPLLESMIPAGTALAQTAAAPT
                     PRFVGIFYPHGMAPGYWEPKAEGALPEKLPYILESLEKYKDQTTVMTGLWSQSAEPPE
                     GTTGSDHWVAAAYHTGIKPRKTAGSDATVGSATIDQMIARKIGQDTLLPSLQLAVEDP
                     NSSSSNCGEGYSCSYTNSISWVELPTPEMETVPRTSPLPMELNPQVVFERLFGSGSTP
                     EIRAERMKQSRSILDALTKELGGLRGQLGASDVRTVNQFTDEIREIERRIQLAAKASG
                     DVPTLDLPPGIPEQFDEHVRLHTKLLALAFKADITRVATLLGARDLTSRAYQFPKSTL
                     FPDGGTSVSFHGGSHHQDDPVQVRRYATLNRYHVSTLAYLAEELKSTPDGDGNLLDRS
                     LIMYGTNMGNSNQHQHYDVAHLLVGGLNGKLKGNRHLAYERKTVPTGNLLLSVLQMYG
                     INAEKQGDSTGLLPKLT"
     gene            complement(1907..>2203)
                     /locus_tag="VFN38_08160"
     CDS             complement(1907..>2203)
                     /locus_tag="VFN38_08160"
                     /inference="COORDINATES: protein motif:HMM:NF019253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1585 domain-containing protein"
                     /protein_id="HET9011776.1"
                     /translation="QVTGPTSLREWILKTYSHQFVEVAAEKLLVYGLGRGAEYQDMPL
                     VRSLARDAPANGNRFSALVLGVVKSRPFQMNTKTGPAPAANTASIATTQGKGAN"
BASE COUNT          302 a          758 c          746 g          397 t
ORIGIN      
        1 cgcgcgcgtt cacgtcggcg cccgcctcga tgagcagctt caccgccgcc ggattgccgt
       61 tgcgcgcggc aagcatcacg gtcgtctcgc cgttggcgct gagctccttg gcgtcggcgc
      121 ccgccttgag caggcggtcg atcatggcgg gcctgccgta cagcgccgcc atcgcgagcg
      181 gcgtcatgcc cacccggttg gcggccttca cgttcgcctt ggcgcgcagc aggatgtcgg
      241 cgagctcgag gtcgtcgcga tacaccgccc agtgcagcgc cgtgccgccg tccacttgcg
      301 gggcgttcac gtccgccttc tgggtgagca gcttctgcac cgccgccgcg tcgccgctca
      361 tcgcggcgtc ggcgaccggg ctcttggcgg cagccgcgat cgacacgctc agcgccagca
      421 cggcaacacc gacgaacgca ccaaccctca tgtggtctcc tgcaaatggc cggcggggct
      481 gaagccccgc cctacgccgc gccctacgtg agctttggaa gaagcccggt gctgtcgccc
      541 tgcttctcgg cgttgatgcc atacatctgg agaacgctca acagcaggtt gcccgtcggc
      601 accgtcttcc gctcgtaggc gaggtggcga ttgcctttga gcttgccgtt caggccgccg
      661 accagcaggt gcgccacgtc gtagtgctgg tgctggttcg agttgcccat gttggtgcca
      721 tacatgatga gcgaccgatc cagcaggttg ccgtcgccgt ccggagtgga cttcagctcc
      781 tcggccagat acgccagcgt ggacacgtga tagcggttca gcgtcgcgta gcggcgtacc
      841 tgcaccgggt cgtcctggtg gtgcgagccg ccgtggaagc tcacgctggt gccgccgtcg
      901 gggaagagcg tcgacttcgg gaactggtag gcgcggctgg tcaggtcgcg cgcgccgagc
      961 agcgtggcca cgcgcgtgat gtccgccttg aacgccagcg ccagcagctt ggtgtgcagc
     1021 cggacgtgct cgtcgaactg ctccgggatg cccggcggca ggtcgagcgt cggcacgtcg
     1081 cccgacgcct tcgcggccag ctggatgcgg cgctcgatct cgcggatctc gtcggtgaac
     1141 tggttcaccg tgcgcacgtc ggaggcgccg agctgcccgc gcagcccgcc cagctccttg
     1201 gtgagtgcgt cgagaatgct gcggctctgc ttcatgcgct cggcgcgaat ctccggtgtc
     1261 gagccgctgc cgaacaaccg ctcgaagacg acctgcgggt tgagctccat cggcaacggg
     1321 ctcgtgcgcg gcaccgtttc catttccggc gtcggcagct cgacccacga gatcgagttc
     1381 gtgtacgagc agctgtagcc ctcgccgcag ttgctcgagc tcgagttcgg atcctcgacc
     1441 gcgagctgca gcgacggcag cagcgtgtcc tgcccgatct tgcgggcgat catctggtcg
     1501 atcgtcgcgc tgccgacggt ggcatccgag cccgcggtct tccgcggctt gatgccggtg
     1561 tgatacgccg cggccaccca gtgatccgaa ccggtcgtgc cctcgggcgg ctcggccgac
     1621 tgcgaccaca ggccggtcat caccgtcgtc tggtccttgt acttctccag cgactcgagg
     1681 atgtacggca gcttctcggg cagcgcgcct tcggctttcg gttcccagta gcccggggcc
     1741 atcccgtgcg gatagaagat gcccacgaag cgcggcgtcg gtgccgccgc ggtctgcgcc
     1801 agcgcggttc ccgccggaat catcgattcg agcagcggca acgcgagggt gacgcccgcg
     1861 ccttgcagga acgtccgccg cggaatgtgc tttttcgtga tgaacatcag ttggctccct
     1921 taccctgggt cgtcgcgatc gacgcggtgt tggcggccgg cgccggcccc gtcttggtat
     1981 tcatctggaa cggccggctc ttgacgacgc cgagcaccag cgccgagaag cggttgccgt
     2041 tcgcaggcgc atcccgcgcg agcgagcgca cgagcggcat gtcctgatac tccgcgccgc
     2101 ggccgagacc gtagacgagc agcttttccg ccgcgacctc gacgaactgg tgcgagtagg
     2161 tcttgaggat ccactcgcgc aggctcgtgg gtccggtcac ctg
//
LOCUS       DASSYW010000511         2094 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1240558, whole genome shotgun sequence.
ACCESSION   DASSYW010000511 DASSYW010000000
VERSION     DASSYW010000511.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2094)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2094)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2094
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1240558"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..370)
                     /locus_tag="VFN38_08165"
     CDS             complement(<1..370)
                     /locus_tag="VFN38_08165"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HET9011777.1"
                     /translation="MSTLDFRLGDGSLGRTTTGSPTEGEDYATPPPARVLLVDDRPEN
                     LLALEALLEPLGLLTVRANSGEDALRRVLVEDFAVILLDVQMPGTDGIETARLIKARD
                     RSRTTPIIFLTALDRDRRRAS"
     gene            673..1086
                     /locus_tag="VFN38_08170"
     CDS             673..1086
                     /locus_tag="VFN38_08170"
                     /inference="COORDINATES: protein motif:HMM:NF012355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /protein_id="HET9011778.1"
                     /translation="MWNGRLAASALCVAALLGSAACGGGGYGGGSSSKTSNPTGPNVA
                     AAGTVTVGSTAFSPTSITVATGGTVRWNWNTCSGGDIYGAGQTCVAHNVTFDDGPASA
                     TQETGSFTRTFPNAGTFPYHCTIHGLAMSGRVVVQ"
     gene            complement(1138..1629)
                     /locus_tag="VFN38_08175"
     CDS             complement(1138..1629)
                     /locus_tag="VFN38_08175"
                     /inference="COORDINATES: protein motif:HMM:NF019499.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vitamin K epoxide reductase family protein"
                     /protein_id="HET9011779.1"
                     /translation="MTYRMSIALASLVSGIVALYLHLWKLGIFGALACGSGGCEYVQG
                     SRYGWFLGVDVALIGAVGYAAVVVVAVLGTLRRWEDARWPTLALMALIFPAVAFTLRL
                     KWAEFIVLRSFCPWCAVSAVTITLCTALVLLDWRRLKRDAAEYGDTDDRDVDARDEVA
                     SGV"
     gene            1897..>2094
                     /locus_tag="VFN38_08180"
     CDS             1897..>2094
                     /locus_tag="VFN38_08180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011780.1"
                     /translation="MLRSPSDLRRLAAAVALLCAPVRSAFAQAPAGADSATRARSSRD
                     SAQALEPVRVTVLRTPFDLSRA"
BASE COUNT          304 a          742 c          769 g          279 t
ORIGIN      
        1 gcgaggcgcg ccggcggtcg cggtcgagcg ccgtgaggaa gatgatcggc gtcgtccgcg
       61 agcggtcgcg ggccttgatg aggcgcgccg tctcgatccc gtcggtgccc ggcatctgga
      121 cgtcgagcag gatgacggcg aagtcctcga ccagcacgcg gcggagcgcg tcctcccccg
      181 agttggcccg cacggtgagc aggccgagcg gctcgagcag cgcctcgagc gcgagcaggt
      241 tctccgggcg gtcgtccacc aggagcacgc gcgccggcgg gggggtggcg tagtcctcac
      301 cctccgtggg gcttccggtc gtggtccgcc cgagagatcc atcgccgagc cggaagtcta
      361 gcgtggacaa ggtcttggag tggcggacac gaggatgggt gaccacggtg gaagggagcc
      421 ggggtctggc gctggagacc atgtcctgca aggagcgggc gcgcgacgcg ctctccttgc
      481 cccgccgcgc atggtggcgt cgcacgggcg ccgagctctc ctctcgccgg cggcgggaat
      541 agaacgcctc gatccgccgt ctgctcgttc cgggtggccg ggcgcgacgg agcgagtagc
      601 cgctcccgtc gcggcgcccg cagaatcgcc gcgtccgcca ccggattcgc gcggctcatc
      661 gaggagggaa ccatgtggaa cggacgattg gccgcgtcgg cgctgtgcgt cgcggcgctc
      721 ctgggaagtg ccgcctgtgg cggagggggg tacgggggag gatcctcgtc gaagacctcg
      781 aaccccaccg gaccgaacgt cgccgccgcg gggaccgtga cggtcgggag caccgccttc
      841 agcccgacgt cgatcactgt cgccacgggg ggcaccgtgc gctggaactg gaacacctgc
      901 tcggggggcg acatctacgg cgcgggacag acgtgcgtgg cgcacaacgt caccttcgat
      961 gacgggccgg cgtccgctac ccaggagacg gggagcttca ctcgcacctt tccgaacgcc
     1021 ggcaccttcc cgtatcactg cacgatccac ggcctcgcca tgtcggggcg cgtggtggtg
     1081 cagtagtcgg cgaggcgagc cgccggagct gacgccggcg gcccggacgc cgctgactca
     1141 gacgcccgag gcgacctcgt cgcgggcgtc cacgtcgcgg tcgtccgtgt cgccgtactc
     1201 cgccgcgtcg cgcttcaggc ggcgccagtc gagcagcacg agggcggtgc agagtgtgat
     1261 cgtcaccgcc gacacggcgc accagggaca gaacgaccgc aggacgatga actcggccca
     1321 cttgagccgc agcgtgaagg cgacggcggg aaagatgagg gccatcaggg cgagcgtcgg
     1381 ccagcgcgcg tcctcccacc gccggagcgt gccgaggacg gcgacgacga cgacggccgc
     1441 gtagccgacc gcgccgatga gcgcgacgtc cacgcccagg aaccagccat agcggctgcc
     1501 ctgtacgtac tcgcatcccc ccgagccgca ggcgagcgcg ccgaagatgc cgagcttcca
     1561 gaggtgcagg tagagcgcga cgatccccga gacgaggctc gccagcgcga tggacatccg
     1621 ataggtcatg gacgcgagtg gtgcagggaa gaggcccgcg cgacggggag ccggtccggg
     1681 gactcttccg gtggcggcgt cgccggtgca cagtattcta gcgccgtgcc ccgggctcgc
     1741 gaaccagccg agcgcgccgc gtgttgatcc cgggttcgct cggggccgta ggcgacggcg
     1801 ccattcgacc gtagaatccc tgctggccgg cgcacgacat ccccagcgtg cgcccgaagg
     1861 acttcaggac accggggctc tcccaccccc ctcgtgatgc tccgttcacc ttcggatctc
     1921 cgccgcctcg ccgcggccgt cgccctgctc tgtgctccgg tccgctcggc gttcgcccag
     1981 gcccccgccg gcgccgacag cgcgacccgc gcgcgttcgt cgcgcgacag tgcgcaggcc
     2041 ctcgagccgg tgcgcgtcac cgtgctccgc actccattcg acctctcgcg cgcg
//
LOCUS       DASSYW010000512         2309 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_142766, whole genome shotgun sequence.
ACCESSION   DASSYW010000512 DASSYW010000000
VERSION     DASSYW010000512.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2309)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2309)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2309
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_142766"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1182)
                     /locus_tag="VFN38_08185"
     CDS             complement(<1..1182)
                     /locus_tag="VFN38_08185"
                     /inference="COORDINATES: protein motif:HMM:NF019121.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011781.1"
                     /translation="MRIAFTHNLRLSDSEDEAEFDSAETVDAIAAGLRAGGHEVEKIE
                     VTGPASRLAERIESFSPDLIFNTAEGRRGRAREAFYPALFEELGFPYTGSDAYVLTVT
                     LDKWLTKMVLAQKGIDTPRARLVTPEELRRVKDPGTLGLALPVIVKPNYEGSSKGIGD
                     EAVVRDARALAEVLPHALRAYPNGVLVEEFVAGTDVTVPFLEGRGDEGVLLPVDYLVD
                     PSARSRFNLYDYRLKSADASKVSVRCPPDLPRDVVSRLRAISKMAARALGMRDLGRID
                     FRVGEDGRLYLLEVNALPSLEPGASLYAAAAREGLDFGETLSAIVESAALRQGLVVKP
                     GARRRRPADPLRIGFTFNVKRVDSKGGNDAEAEYDAPETIDSIRDALESHGHQVMLFE
                     AT"
     gene            complement(1199..>2309)
                     /locus_tag="VFN38_08190"
     CDS             complement(1199..>2309)
                     /locus_tag="VFN38_08190"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HET9011782.1"
                     /translation="ARARAAGAALVVVDDAPSSDRLAAAIYGGARAYLPRAQLELLGR
                     VAAAAAARRHGEALGVKIVEALGKHGILTSADRSRAPAPQRDVDVQLIADATTPKPHG
                     AVVPTGHEVLVVDDEAVVLTVLREALRRGGYRVTTAASAEEAIDLMHKRRFDLVLTDK
                     NLPGASGLDVLRSARNLNPAPAIVLITGYSSFDSAVEALDIGAHDYIEKPIRDVEDLR
                     FRIRRALSRRDEQLARPKPTRTAGRAGRVLLVEVEGQRRQLLAEYLGKNHHVTAAKDG
                     DEALELLKHAHFDLVLADRHLPGGSGLRVIEHAQRLLPHCASVLYTAYPSYDSVQEAF
                     AVGVDAYLVRPNDDLKKLGEKVAEALGGRGGILLG"
BASE COUNT          329 a          867 c          776 g          337 t
ORIGIN      
        1 ggtcgcctcg aacagcatca cctggtggcc gtggctctcc agcgcgtcgc gaatcgagtc
       61 gatggtctcg ggcgcgtcgt actcggcctc ggcgtcgttg ccgcccttcg aatccacccg
      121 cttgacgttg aaagtgaagc cgatgcgcag gggatcggcg gggcgccgcc ggcgcgcgcc
      181 cggcttcacc accagcccct ggcgcagggc cgcgctctcg acgatcgcgc tcagcgtctc
      241 gccgaagtcc agcccctcgc gcgccgcggc ggcgtacagg ctggcgcccg gctccagcga
      301 cggcagcgcg ttgacctcca gcaggtagag gcgcccgtcc tcgcccacgc ggaagtcgat
      361 gcggccgaga tcgcgcatgc ccagcgcgcg cgccgccatc ttcgagatcg cgcgcagccg
      421 cgacacgacg tcgcgcggga gatcgggcgg gcagcgtacc gacaccttgc tcgcgtccgc
      481 cgatttcagg cggtaatcgt agagattgaa gcggctgcgc gccgacggat cgaccaggta
      541 gtcgaccggc agcagcacgc cctcgtcgcc gcgcccctcg aggaacggca ccgtcacgtc
      601 ggtgccggcc acgaactcct cgaccagcac gccgttcgga tacgcgcgca gggcgtgcgg
      661 cagcacctcg gcgagcgcgc gcgcatcgcg caccaccgct tcgtcgccga ttcccttcga
      721 ggacccttcg tagttgggct tgacgatgac gggcagcgcc aggcccagcg tccccggatc
      781 cttcacgcgc cggagctcct cgggcgtcac cagccgcgcc cgcggcgtgt cgatcccctt
      841 ctgcgccagc accatcttgg tgagccattt gtccagcgtc accgtcagga cgtacgcgtc
      901 cgacccggtg tagggaaacc ccagctcctc gaacagcgcc gggtagaacg cctcgcgcgc
      961 gcgcccgcgc cgtccctcgg cggtgttgaa gatcaggtcc gggctgaacg attcgatccg
     1021 ttcggccaga cgcgacgcgg ggccggtgac ctcgatcttc tcgacctcgt ggccgcccgc
     1081 gcgcagaccg gccgcgatcg cgtccaccgt ctcggcgctg tcgaactcgg cttcgtcctc
     1141 gctgtctgaa aggcgcaggt tgtgtgtgaa agcgatccgc ataaaacgac gatgcccctc
     1201 aacctagcag gattccacca cggccgccga gcgcttccgc caccttctcg cccagcttct
     1261 taagatcgtc gttgggccgc accagatacg cgtcgacgcc gaccgcgaac gcctcctgca
     1321 cggagtcata cgacgggtac gccgtgtaca gcaccgacgc gcagtgcggc agcaggcgct
     1381 gcgcgtgctc gatgacgcgc agcccggagc cgcccggcag gtggcgatcg gccagcacca
     1441 gatcgaagtg cgcgtgcttg agcaactcca gcgcctcgtc gccatccttg gcggccgtca
     1501 cgtggtgatt cttgcccagg tactccgcca gcagttgccg ccgctggccc tcgacctcga
     1561 cgagcagcac gcgtcccgcg cggcccgcgg tgcgcgtcgg cttcggccgc gccagctgct
     1621 cgtcccgccg cgacagcgcc cgccggatgc gaaagcgcag gtcctcgacg tcgcggatcg
     1681 gcttctcgat gtagtcgtgc gcgccgatgt ccagggcctc cacggccgaa tcgaacgagc
     1741 tgtaaccggt gatgagcacg atcgcgggcg cgggattgag gttgcgtgcg gagcgcagca
     1801 cgtcaagacc cgacgcaccg ggaaggttct tgtccgtcag caccaggtcg aagcgccgct
     1861 tgtgcatgag gtcgatggct tcctcggcgg acgccgcggt cgtcacccgg tagccgcccc
     1921 ggcgcagcgc ctcgcgcagc acggtcagca cgacggcctc gtcgtcgacg acgagcacct
     1981 cgtgcccggt cgggacgacc gcgccgtgcg gcttcggcgt ggtggcgtcg gcgatcagct
     2041 ggacgtccac gtcgcgctgg ggcgccggcg cccggctgcg atcggcgctg gtcaggattc
     2101 cgtgcttgcc cagcgcctcg acgatcttca cgcccagggc ttccccgtgg cggcgcgccg
     2161 cggccgcggc cgccacccgc cccagcagct ccagctgggc gcgcggcagg tacgcgcgcg
     2221 cgccgccgta gatcgcggct gccagccgat ccgacgaagg ggcgtcgtca accaccacca
     2281 gcgcggcgcc ggcagcccgc gcgcgggcc
//
LOCUS       DASSYW010000513         2246 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1700726, whole genome shotgun sequence.
ACCESSION   DASSYW010000513 DASSYW010000000
VERSION     DASSYW010000513.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2246)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2246)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2246
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1700726"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..906
                     /locus_tag="VFN38_08195"
     CDS             <1..906
                     /locus_tag="VFN38_08195"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HET9011783.1"
                     /translation="WNVTTAERFAGGDGPCGSRLEPGVAGRTALTLRVQTGCDERCSY
                     CIIPSTRGAGRSKPLGVIREAVARAAAAGYREFAITGVHLGSYGRDLADGTSLLSLAR
                     ELAHWPGDMLFRLSSLEPMDCSRELVDLVAASPRLAPHFHLPLQHAADEMLAAMRRPY
                     TLATYRTLVDAIRERMPHASIGSDVIVGFPGETERHAAALVDYLETSPLTHVHVFPYS
                     HRPGTEASGFDGMPPSPVVRARGAAVRAISERLSRTFRASQAGTVRRALVVDDGTAAV
                     TDNYLRVSLEVARGRNEWIDVAIPS"
     gene            954..1256
                     /locus_tag="VFN38_08200"
     CDS             954..1256
                     /locus_tag="VFN38_08200"
                     /inference="COORDINATES: protein motif:HMM:NF017088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042314 - bacteriochlorophyll binding
                     [Evidence IEA];
                     GO_process: GO:0019684 - photosynthesis, light reaction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PRC-barrel domain-containing protein"
                     /protein_id="HET9011784.1"
                     /translation="MVHRLSLIQGFHVHATDGHIGHVDDFLMEETSWQIRYLVVDTSN
                     WLGGKWVAVSPSSVKRIDWSNREVHVSLTRAEIRDSPNMEEAQVPSYELVPRFVIM"
     gene            complement(1260..>2246)
                     /gene="rlmN"
                     /locus_tag="VFN38_08205"
     CDS             complement(1260..>2246)
                     /gene="rlmN"
                     /locus_tag="VFN38_08205"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: protein motif:HMM:TIGR00048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016433 - rRNA (adenine) methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HET9011785.1"
                     /translation="RWIWRHGITSLAGMTDLPRRLREELATAATIVTPVIVHHAHSED
                     GTQKFVLRLADGRQIESVFIPDTPSMTFCVSTQVGCAMACGFCLTGKMGLVRNLTPGE
                     IAGQVRVLAKATGLLEKPFNIVLMGMGEPLHNYENTMKALRMLHEEQGLSISPRRVTL
                     STVGIVPGLERLAREPLMPNLAISLHATTEEQRTALVPPNRKYSLASLLETCRKFPLK
                     KRARITFEYVLLSGVNDSPEDARRLAKLLAGMKAKVNLIPLNAAPGIEFERPSDERVE
                     RFAQILADRHMTVSVRKSRGRDIRAACGQLIVEGGTKKSAGQQMALLIDGLR"
BASE COUNT          342 a          745 c          776 g          383 t
ORIGIN      
        1 tggaatgtga ccaccgccga gcggtttgcc ggcggcgatg gtccgtgcgg cagccggctg
       61 gagcccggcg tcgccggccg gacggcgttg acgctgcgcg tgcagaccgg ctgtgacgag
      121 cggtgcagct actgcatcat cccgagcacg cgcggcgcgg ggcgctcgaa gccgctcggc
      181 gtgatccgcg aagccgtggc acgcgccgcc gccgcgggat atcgcgagtt cgcgattacc
      241 ggcgtccatc tcggatcgta tggacgagac ctcgcggacg gtacgtcctt actgtcgctc
      301 gcgcgggagc tcgcgcactg gcccggcgac atgctctttc gattgagttc gctcgagccg
      361 atggactgca gccgcgagct cgtcgatctc gtggccgcgt cgccgcgtct cgcgccgcat
      421 ttccatctgc cgctgcagca cgccgccgac gagatgctcg cggccatgcg ccggccgtac
      481 acgctcgcga cgtatcgcac gctcgtcgac gcgatccgcg agcggatgcc gcacgcgtcg
      541 atcggctccg acgtgatcgt cgggttcccg ggtgagacgg agcgtcacgc ggcggcgctg
      601 gtggactatc tggaaacgtc gccgctcacg cacgtgcacg tgtttccgta ctcgcatcgt
      661 ccaggcaccg aggcgagcgg attcgacggc atgccgccgt ctccggtcgt gcgcgcgcgc
      721 ggcgccgcgg tgcgcgccat cagcgagcgc ctctcgcgca cgttccgcgc gtcgcaagcc
      781 ggcacggttc ggcgtgcgct cgtcgtcgac gacggtaccg ccgcggtgac cgacaactat
      841 ctgcgcgtct cgctcgaggt ggctcgcggg cgcaacgagt ggatcgacgt cgcgatccct
      901 agctgagcag cgcatcgaaa ctgagcagcg catcgcgggg ctaagatcgg cccatggtgc
      961 accgactgag tctcatccag gggtttcacg tgcacgcgac ggacggccac atcggccacg
     1021 tagacgactt cctcatggaa gagacgtcgt ggcagatccg ctatctcgtc gtggatacga
     1081 gcaactggct cgggggcaag tgggtggcag tctccccctc gtcagtcaag cgcatcgact
     1141 ggtcgaatcg cgaggttcac gtgtcgctga cgcgcgcaga gattcgcgac agccccaata
     1201 tggaagaagc gcaggtgccg tcgtacgagc tggtcccgcg cttcgtgatc atgtagggct
     1261 tacctaagac cgtcgatcag cagcgccatc tgctgaccgg cgctcttctt ggtgccgccc
     1321 tcgacgatga gctgaccgca ggcggcgcgg atgtcgcggc cgcggctctt gcgcaccgac
     1381 accgtcatgt gacggtcggc gaggatctgc gcgaagcgct ccacgcgttc gtccgacggg
     1441 cgttcgaact cgatgcccgg cgcggcgttg agcggaatca gattcacctt cgccttcatt
     1501 cccgccagca actttgcgag gcgacgcgcg tcttcgggcg aatcgttcac gcccgagagc
     1561 agcacgtact cgaacgtgat gcgcgcgcgc ttcttgagcg gaaacttgcg gcacgtttcg
     1621 agcagcgatg ccagcgagta cttgcgattg ggcggcacga gcgcggtgcg ctgctcttcg
     1681 gtggtcgcgt gcagcgagat cgcgaggttc ggcatgagcg gttccctggc cagccgctcg
     1741 aggcccggca cgatgccgac ggtggagagt gtgacgcgcc gcggcgagat ggacagaccc
     1801 tgctcctcgt ggagcatgcg cagcgccttc atcgtgttct cgtagttgtg gagcggctcg
     1861 cccatcccca tcagcacgat gttgaacggc ttctcgagga gcccggtcgc cttggcgagc
     1921 acgcgcacct gcccggcgat ttcacccggc gtgaggttgc gcaccagccc catcttgccg
     1981 gtcaggcaga agccgcacgc catcgcgcag ccgacctgcg tggagacgca gaaggtcatc
     2041 gacggggtgt cggggatgaa caccgactcg atctgccggc catcggccag gcggagcacg
     2101 aacttctgcg tgccgtcctc ggaatgggcg tggtggacga tgacgggggt gacgatggtg
     2161 gcggccgtgg ccagctcctc gcgcagcctg cggggcaggt cggtcatgcc cgccaggctg
     2221 gtgatcccgt gccgccaaat ccaccg
//
LOCUS       DASSYW010000514         2286 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_881686, whole genome shotgun sequence.
ACCESSION   DASSYW010000514 DASSYW010000000
VERSION     DASSYW010000514.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2286)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2286)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2286
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_881686"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..970
                     /locus_tag="VFN38_08210"
     CDS             <1..970
                     /locus_tag="VFN38_08210"
                     /inference="COORDINATES: protein motif:HMM:NF023425.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050825 - ice binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ice-binding family protein"
                     /protein_id="HET9011786.1"
                     /translation="AGGTAGTFNNTVRATSGGISGFATVNVTPVLATLTVQPNPANVF
                     TFNTQQFAVTARDANGNVIPTPSVVWSVVNGGGTIDANTGLFTAGGTTGTFTNTVQAT
                     SGTVSGNATVNVNSTAPAPIVNLGAAAPNGVMAGTAFTCVNLGTINADIAISPGSTVT
                     GFPPCVITGVQHLADAQAAQAQIDLTNAYNTLAGLPCPPANMIVADLGGTTKPAGVYC
                     SATSIGVTGNLILDGGGDPNATFVFQAGTGLTTAGNIILINGAQAKNVYWQVGSSATI
                     GTASQWKGNILALTSITLVDNANLIGRALARNGAVSLGTNNTITLP"
     gene            1065..1775
                     /locus_tag="VFN38_08215"
     CDS             1065..1775
                     /locus_tag="VFN38_08215"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HET9011787.1"
                     /translation="MVGLAALAWAVPAAAQQRGTMEFGAFGSAATFDEALSLKTGYGG
                     GGRIGMFLDPRWSIEFEDAEMRASRPNGLADVNVGILSGRLVAVPIQSGMLSLLVGAG
                     AGVSTETNFLHSYGVDALVGAKFAFNDKVALRVDGVWDWLANEDWKSYKSVRVGLSMY
                     RHPRPEIRTVTVVTPAPPPTIVRVDSVSASEIARLRASEAALRTLRDSIAANPPAGCL
                     PCRAVPERSIPMRKDVKP"
     gene            1888..2151
                     /locus_tag="VFN38_08220"
     CDS             1888..2151
                     /locus_tag="VFN38_08220"
                     /inference="COORDINATES: protein motif:HMM:NF013677.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HET9011788.1"
                     /translation="MRPSKFTDEEIVQALRQVRAGTPAVQVCRTLGITQTTFYRWRKK
                     YEHAEGGELRELALLREENRKLRQIVAHLLLDSRRGTEIRRRK"
BASE COUNT          387 a          798 c          796 g          305 t
ORIGIN      
        1 cgccggtggc accgcgggca ccttcaacaa caccgtgagg gcgacgagcg gcgggatctc
       61 cggattcgcc accgtcaacg tcactccggt gctggcgacg ctcaccgtgc agccgaaccc
      121 cgccaacgtc ttcaccttca acacgcagca gttcgccgtg acggcacgtg acgcgaacgg
      181 gaacgtcatt ccgaccccgt cggtcgtgtg gtcggtcgtg aacggcggcg gcaccatcga
      241 cgcgaacacg ggtctgttca ccgccggcgg caccaccggg accttcacca acaccgtgca
      301 ggcgaccagc ggcacggtct ccggcaatgc cacggtgaac gtgaactcga cggccccggc
      361 gccgatcgtc aatctcggcg cggccgcccc gaacggcgtc atggcgggta cggcgttcac
      421 gtgcgtgaac ctcggcacca tcaacgccga catcgccatc agcccgggca gcacggtgac
      481 cggcttcccg ccgtgcgtca tcacgggcgt gcagcatctg gccgacgccc aggcggcgca
      541 ggcgcagatc gacctgacca acgcgtacaa cacgctggcc ggtctcccct gtcccccggc
      601 gaacatgatc gtcgcggacc tgggcggcac gaccaagccg gcgggggtct actgctcggc
      661 caccagcatc ggcgtgacgg gcaacctgat cctcgatggc ggcggcgacc cgaatgcgac
      721 cttcgtcttc caggccggca ccgggctcac caccgcgggc aacatcatcc tgatcaatgg
      781 cgcccaggcc aagaacgtgt actggcaggt gggcagctcc gccacgatcg gcacggcgtc
      841 gcagtggaag ggaaacatcc tcgccctgac gagcatcacg ctggtggaca acgcgaacct
      901 gatcggccgc gccctggcgc ggaacggcgc ggtctcgctg ggcaccaaca acaccatcac
      961 gctgccatga cgccggcgac cgccggggcc ggacgaccgt ccggccccgg catcgctccg
     1021 gccacgtagt cttcaaggag aatcacatgt caatcagggc actaatggtt ggactcgcgg
     1081 cgttggcgtg ggccgtgcca gccgcggcgc agcagcgcgg cacgatggag ttcggcgcgt
     1141 tcggcagcgc ggcgaccttc gacgaggcgc tcagcctcaa gaccggctac ggcgggggcg
     1201 ggcgcatcgg catgttcctc gatccgcgct ggtcgatcga gttcgaggat gcggagatgc
     1261 gggcgagccg gccgaacggg ctggccgacg tgaacgtcgg gatcctgtcc ggccgactcg
     1321 tggcggtccc catccagtcg ggcatgctgt cgctcctcgt cggggcgggg gcgggcgtct
     1381 ccaccgagac gaacttcctg cacagctacg gcgtggacgc gctggtgggc gcgaagttcg
     1441 cgttcaatga caaggtcgcg cttcgcgtgg acggcgtgtg ggactggctc gcgaacgagg
     1501 actggaagtc gtacaagagc gtgcgcgtgg ggctcagcat gtaccggcac ccgcggccgg
     1561 agatccgcac cgtgaccgtc gtcaccccgg caccgccgcc gacgatcgtc cgggtggatt
     1621 cggtgagcgc atcggagatc gcgcgcctgc gcgcgtccga ggccgcgctc cgcaccctgc
     1681 gtgactcgat cgccgcgaac ccgccggccg gctgcctgcc ttgccgcgcc gtcccggagc
     1741 ggagcatccc gatgcggaag gacgtgaagc cgtagcgatg acggccgggg ctgaacatca
     1801 gcccagcgag gagccgtcgg gcacgcactc gtgcgtgccc ggcgtcccca cgatcatggt
     1861 accgacgcgg gatgggggtc tcgatggatg cgaccaagca aattcactga cgaggagatc
     1921 gtgcaggcgt tgcggcaggt gagagccgga acgccagccg tgcaggtctg tcgaacgctg
     1981 ggcatcacgc agactacctt ctaccgctgg cgcaagaagt acgagcatgc cgagggtggc
     2041 gagctccggg agctcgcact gctccgcgag gagaacagga agctcaggca gatcgtcgcc
     2101 cacctgctgc tcgacagccg gcggggaacg gaaatccgac gcaggaagta ggacgagcag
     2161 gggccccggc gcacgcgccg gggccccttc gcttcctcag gcgcgccgcc gctgcggccg
     2221 ccgcgcgtcg gacggcgatg cgccggcgcc cggcggacac gccggcgccg agcggagcac
     2281 cgacag
//
LOCUS       DASSYW010000515         2129 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_607167, whole genome shotgun sequence.
ACCESSION   DASSYW010000515 DASSYW010000000
VERSION     DASSYW010000515.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2129)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2129)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2129
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_607167"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1241)
                     /locus_tag="VFN38_08225"
     CDS             complement(<1..1241)
                     /locus_tag="VFN38_08225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011789.1"
                     /translation="MKLRNLWLVAGAAASLAAFTACQPDKTLSVENVDQPDVARAFAT
                     ADGIEAILRSGFSQIFGATHATTTAILPAALVLSFENYGSVANFGMNLRASIPRTPID
                     NNRGNVTASESFRDFQQLSLRGRTIANAIKALDKLVANNGSLGSPAQNLRARSFGFFA
                     LGLANGEMALMYDSVGVSMPSMETIDVPALAAYGDAMTVALQQLDSALVLANAARTAT
                     GTNGFPLPVTWLKTAQPTSVDDFIRIVRSTKARLRAGVARTPTERAAVNWAEVVNDAA
                     AGITANVQLELDNGNGWGASWLNQAAVFQGWHNMTPYIVGMADTSSGYANWLATDRSQ
                     RTPFLILTPDKRFPQGDTRAAQQAASPAATAVLPTVYFRNRPAGEDSPGDAWGNSFYD
                     YVRFRHYRQQSQIGPWLWMTKA"
     gene            complement(1333..>2129)
                     /locus_tag="VFN38_08230"
     CDS             complement(1333..>2129)
                     /locus_tag="VFN38_08230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011790.1"
                     /translation="DCSQLPGTFASQCGGAGSQFQKNGDGFIVWTGGLDLGQGITNNA
                     WNASLNPGTLANPTAPWATRAVWGMPIQLRDSTNNVAQVALGNATPDWHGGLSSNFSL
                     GKFSAYGLLDGSFGRKVWNEGYHWALGDFMSGSVDQGGKSVEDAKPIGYFYRAGPSAQ
                     GGGSTGVGGLYNVLGPTNESVEDASYVKLREVSVNYNIGAVGGQGNWTVGLVGRNLHT
                     WTKYRGYDPEVGRSADTQLGNAALVGIDYFTFPNLRTFTLQVSTAF"
BASE COUNT          310 a          736 c          730 g          353 t
ORIGIN      
        1 gccttcgtca tccagagcca cggtccgatc tgactctgct gccgatagtg ccggaagcgc
       61 acgtagtcgt agaacgagtt gccccacgca tcgccgggtg aatcctcgcc cgccgggcga
      121 ttgcggaaat acacggtggg cagcaccgcc gtcgccgccg gcgacgccgc ctgctgcgcc
      181 gcgcgggtgt caccctgcgg gaaccgcttg tccggcgtca ggatcaggaa gggcgtccgc
      241 tggctccggt cggtcgcgag ccagttggcg tagccgctcg acgtgtccgc catgcccacg
      301 atgtaggggg tcatgttgtg ccacccctgg aacaccgccg cctggttcag ccacgacgcg
      361 ccccacccgt tgccgttgtc cagttcgagc tgcacgttcg ccgtgatgcc ggccgcggcg
      421 tcgttgacga cttcggccca gttcaccgcc gcccgctcgg tgggcgtgcg cgccacgccg
      481 gcgcgcagcc gcgccttggt cgagcgcacg atccttatga agtcgtcgac gctcgtcggc
      541 tgggccgtct tcagccaggt gaccgggagc gggaatccat tcgtgccggt cgccgtgcgc
      601 gccgcgttgg cgagcaccag cgccgaatcg agctgctgca gcgcgacggt catcgcgtcg
      661 ccgtacgcgg cgagcgccgg cacgtcgatc gtctccatcg agggcatcga gacgccgacg
      721 gagtcgtaca tcagcgccat ctcgccgttc gccagcccga gcgcgaagaa gccgaacgaa
      781 cgcgcgcgga ggttctgcgc cggcgagccg aggctgccgt tgttggccac gagcttgtcg
      841 agcgccttga tcgcgttggc gatggtgcgc ccgcgcagcg acagctgctg gaagtcgcgg
      901 aagctctccg acgccgtcac gttgccgcga ttgttgtcga tcggcgtgcg cgggatgctg
      961 gcgcgcaggt tcatgccgaa gttcgcgacc gagccgtagt tctcgaacga gagcacgagc
     1021 gcggcgggaa ggatcgccgt cgtcgtggca tgcgtcgcgc cgaagatctg gctgaagccg
     1081 ctgcgcagga tcgcctcgat gccgtcggcg gtcgcgaatg cgcgcgccac gtccggctgg
     1141 tcgacgttct cgaccgagag cgtcttgtcg ggctgacagg ccgtgaaggc ggcgagcgat
     1201 gcggcagccc ccgcgaccag ccacaggttt ctcagtttca tctaatgccc cgaaggttgc
     1261 gccgtgggtg ccgccgccga agcggcggca ccgggcgagt gcgtgagtgg gtcggtcagg
     1321 tgcgccgcag gatcagaacg ccgtcgatac ctgaagcgtg aacgtgcgca ggttcgggaa
     1381 ggtgaagtag tcgatgccga cgagcgccgc gttgcccagc tgcgtatcgg cggaccgtcc
     1441 cacttccgga tcgtagccgc ggtacttggt ccaggtgtgc aggttgcggc cgacgagacc
     1501 gaccgtccag ttcccctgcc cgcccaccgc gccgatgttg tagttcaccg acacctcgcg
     1561 gagcttcacg tagctggcgt cttcgaccga ctcgttcgtc ggaccgagga cgttgtacag
     1621 accgcccacc cccgtgctgc cgccgccctg tgccgacggg cccgcgcggt agaagtagcc
     1681 gatcggcttc gcgtcctcga cgctcttgcc gccctggtcc acggagccgg acatgaagtc
     1741 gccgagcgcc cagtggtagc cctcgttcca caccttgcgg ccgaacgagc cgtcgagcag
     1801 cccgtatgcg ctgaacttgc cgaggctgaa gttcgacgac agcccgccgt gccagtccgg
     1861 cgtcgcgttg cccagcgcca cctgcgccac gttgttcgtg gagtcgcgaa gctggatcgg
     1921 catcccccac accgcacgcg tcgcccacgg cgcagtcggg ttggccagcg tgccggggtt
     1981 gagcgaggcg ttccaggcgt tgttcgtgat gccctgaccc agatcgagcc cacccgtcca
     2041 cacgatgaag ccgtcgccgt tcttctggaa ctgcgagccc gcgccaccgc actggctggc
     2101 gaacgtgccc ggcagctgcg agcagtcgg
//
LOCUS       DASSYW010000516         2271 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_349923, whole genome shotgun sequence.
ACCESSION   DASSYW010000516 DASSYW010000000
VERSION     DASSYW010000516.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2271)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2271)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2271
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_349923"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..736
                     /locus_tag="VFN38_08235"
     CDS             <1..736
                     /locus_tag="VFN38_08235"
                     /inference="COORDINATES: protein motif:HMM:NF019229.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="CRTAC1 family protein"
                     /protein_id="HET9011791.1"
                     /translation="RNNRDGTFTDMTEKAGLRGKAIYAMGSNFGDLDNDGWLDFYVGT
                     GNPDLRSVIPNRMFHSVGGTRFEEVTLPGGFGHLQKGHAVAFADLDRNGYEDVYEVIG
                     GAYEGDTYTSVLVENPGWPDTAWITLELEGRTANRSAVGAEVELDVVDAAGATRAIWR
                     TVGNGGSFGSNPLQLHVGLGRATRVKAVHVHWPDKARTVTSYADLSVRSAYRIVQGEA
                     PVLLKRPPVPFRKVKTSAPPMAHSQP"
     gene            complement(725..>2271)
                     /locus_tag="VFN38_08240"
     CDS             complement(725..>2271)
                     /locus_tag="VFN38_08240"
                     /inference="COORDINATES: protein motif:HMM:NF017745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF885 domain-containing protein"
                     /protein_id="HET9011792.1"
                     /translation="REAAAFLSRANAIDTTSLTAGERVSLAILGRGLSEEVEGNRFGQ
                     RTVLFTTYYGWHTGFADIGTTHPFRDRADYEAYVARLAAYPRYNRGAIETTRAALAGS
                     FAQPCAPFAGYERTIAGVMDSVPEKSRFLDPFARRPSSIAESDWASLHARAVAAVRDS
                     VYPAYRALLDFYRADYAPHCRSAAGISTTPNGSAYYAFRVRRETTTELTPEEVYQLGL
                     REVARIGAEMDSVARAAGYADRKTYVAHLRTDPAYYPKSAAELLATASVLTKRIDGEM
                     PRYFGRLPRLPYTVKPIPDAVAPGVTAAYYGRGSLEGGRPGIYWVNTSKLDQRPYYEL
                     TSLTLHESVPGHHQQISIAQELDLPVFRRYGTSFAAFTEGWGLYAERLGIEMGLYDTP
                     EKQMGRLSYEMWRACRLVVDPGIHVKGWTREQAIEYMLAQTALSRGNVEAEVNRYITW
                     PGQATAYKVGELRIRELRTQAERQLGARFDLRGFNDAVLENGPVPLDVMEAQVKRWIA
                     SRLSRL"
BASE COUNT          347 a          755 c          826 g          343 t
ORIGIN      
        1 tcgcaacaac cgcgacggca ccttcaccga catgacggag aaggcggggt tgcgtggcaa
       61 ggcgatctac gcgatgggct ccaacttcgg cgacctggac aacgacggct ggctggactt
      121 ctacgtcggc acggggaacc cggatctgcg ctcggtgatc ccgaaccgga tgttccacag
      181 cgtgggcggc acgcgattcg aggaggtgac gctgcccggt gggttcgggc acctccagaa
      241 gggacatgcc gtggccttcg ccgatctcga tcgcaacggg tacgaggacg tgtacgaggt
      301 gatcggcggc gcgtacgagg gcgacaccta cacgagcgtg ctggtcgaga atcccggctg
      361 gcccgacact gcgtggatca cgctcgagct cgaaggcagg acggcgaatc gctcggcggt
      421 cggcgcggag gtggagctgg atgtcgtgga cgccgccggc gcgacccgcg cgatctggcg
      481 gacggtgggg aacggcggat ccttcggctc gaacccgctg cagctgcacg tggggctggg
      541 gcgcgcgact cgcgtgaagg cggtgcacgt gcactggccc gacaaggcgc gcaccgtgac
      601 gtcgtacgcc gacctgtcgg tgcgcagcgc gtatcgcatc gtgcagggtg aggcgccggt
      661 gctgttgaag cgcccgccgg tgccgttcag gaaggtgaag accagcgcgc cgccgatggc
      721 tcattcacag ccgtgacagg cgcgaggcga tccaccgctt cacctgcgct tccatcacgt
      781 ccagcggcac ggggccgttc tccagcaccg cgtcgttgaa gccgcgcagg tcgaaccgcg
      841 cgccgagctg ccgctcggcc tgcgtgcgaa gctcgcggat gcgcagctcg cccaccttgt
      901 acgccgtcgc ctggccgggc caggtgatgt agcggttcac ctccgcttcc acgttgccgc
      961 gggaaagcgc agtctgggcc agcatgtact cgatcgcctg ctcgcgcgtc cagcctttca
     1021 cgtggatccc cggatccacg acgagccgac aggcgcgcca catctcgtag ctcaggcgtc
     1081 ccatctgctt ctccggcgtg tcgtacagcc ccatctcgat gccgagccgc tcggcgtaca
     1141 gcccccaccc ctccgtgaag gcggcgaagg aggtgccgta gcggcggaag acgggaaggt
     1201 cgagctcctg cgcgatggag atctgctggt gatggccggg caccgactcg tgcagcgtga
     1261 gcgacgtgag ctcgtagtac ggccgctgat cgagcttgct cgtgttcacc cagtagatcc
     1321 cgggacgtcc gccctcgagc gagcccctgc cgtagtaggc cgccgtgacg ccgggcgcca
     1381 ccgcgtcggg gatcggcttc accgtgtacg gaaggcgcgg cagccggccg aaatacctcg
     1441 gcatctcccc gtcgatccgc ttcgtgagca ccgacgccgt ggcgaggagc tcggcggcgc
     1501 tcttcggata gtacgcgggg tcggtgcgca ggtgcgcgac gtacgtcttg cgatccgcgt
     1561 agccggcggc gcgtgccacc gaatccatct cggcgccgat gcgcgccacc tcgcgcaggc
     1621 cgagctgata cacctcctcg ggcgtcagct ccgtcgtcgt ctcgcggcgg acgcggaagg
     1681 cgtagtacgc cgagccgttc ggcgtggtgg agatgccggc ggccgagcgg cagtgcggcg
     1741 cgtagtcggc gcggtagaag tcgagcaggg cgcgatacgc cgggtatacc gagtcgcgca
     1801 ccgcggccac ggcgcgcgcg tgcagcgacg cccagtccga ctcggcgatc gacgacggcc
     1861 gccgcgcgaa gggatccagg aagcgcgatt tttccgggac gctgtccatc acgccggcga
     1921 tcgtgcgctc gtagccggcg aacggcgcgc agggctgggc gaagctgccg gcgagggcgg
     1981 cgcgcgtcgt ctcgatcgcg ccgcggttgt agcgtgggta ggcggcgagt cgcgccacgt
     2041 acgcctcgta gtcggcgcgg tcgcggaagg gatgcgtcgt cccgatgtcg gcgaagccgg
     2101 tgtgccagcc gtaataggtg gtgaacagca ccgtgcgctg cccgaagcga ttcccttcga
     2161 cctcctccga caacccacgg ccgaggatgg cgagcgacac ccgctcgccc gcggtgagcg
     2221 acgtcgtgtc gatcgcgttg gctcgggaga gaaatgcggc cgcctcgcga g
//
LOCUS       DASSYW010000517         2032 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1179617, whole genome shotgun sequence.
ACCESSION   DASSYW010000517 DASSYW010000000
VERSION     DASSYW010000517.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2032)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2032)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2032
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1179617"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..510)
                     /locus_tag="VFN38_08245"
     CDS             complement(<1..510)
                     /locus_tag="VFN38_08245"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HET9011793.1"
                     /translation="MLPVGEEFEGYVVDATLGRGGYATVYRAHRRAEPNRAVALKVLD
                     VHHRGEDQTARLRREFEFAHQLENRHVITVYQHGVGWLTMELVDGGTAAVLTERKDQL
                     AALAQIADALDYIHQRGIVHCDVKPSNILVSQDFSRAVLIDFGVAHTVAETVGRRHAQ
                     LEASLSYTAP"
     gene            595..1557
                     /locus_tag="VFN38_08250"
     CDS             595..1557
                     /locus_tag="VFN38_08250"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: protein motif:HMM:NF002870.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0050515 - 4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase activity
                     [Evidence IEA];
                     GO_process: GO:0016114 - terpenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HET9011794.1"
                     /translation="MSNGSTASEWVPTGSVTVRVPGKVNLYLAVGDRREDGYHELTTV
                     FHAVSLLDEVTVRNADVLSLELAGEGAESLPADERNLAWQAAELMAEHVGRAPDVAIT
                     VEKSIPVAGGMAGGSADAAAVLVAINSLWELGVPRRDLHALAARLGSDVPFALHGGTA
                     LGTGRGEELATVLARSTFHWVLAFADGGLSTPAVFAEIDRLRESADRSLPSPLEDPEP
                     VLAALASGDPSALAPLLGNDLQPATLSLDPGLRRTLRAGVEAGALAGIVSGSGPTCAF
                     LCPSSTSAVDIGAELAGAGVCRTVRVASGPVQGARVVPAPTPQM"
     gene            1814..>2032
                     /locus_tag="VFN38_08255"
     CDS             1814..>2032
                     /locus_tag="VFN38_08255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011795.1"
                     /translation="MSRFTDKMYRSARNATTGMVTGEPHEPVRHTWGEVHERARRIAG
                     GLAAAGIAHGDAVGVLAGFPVEIAPTAQG"
BASE COUNT          297 a          674 c          716 g          345 t
ORIGIN      
        1 cggtgccgtg taggacagcg aagcctcgag ttgcgcatgc cgccttccta cggtctctgc
       61 gacggtgtgg gcgacaccga agtcgatcag cacggcgcgg gaaaagtctt gcgagacaag
      121 tatgttggac ggtttcacat cgcagtgcac gattccgcgc tgatggatgt agtccagggc
      181 gtcggcgatc tgtgccagcg cggccagctg gtccttccgc tccgtcagga cggccgccgt
      241 gccgccgtcg accagttcca tggtgagcca gccgacgccg tgttgataga cggtgatgac
      301 atggcgattc tcgagttgat gcgcgaactc gaattccctt cgaagccgcg cggtttggtc
      361 ctcgccgcgg tgatggacgt cgagaacctt gagcgccaca gcgcgattcg gctcggcccg
      421 gcggtgtgcc cggtacacgg tggcgtatcc gccccgtccc agggtggcgt cgacgacgta
      481 accttcgaac tcctcgccga cgggaagcac ggtcccagcc taggacgcgt gtccggcccc
      541 gctttctcac ggcatgacta cttctgtgca gcgtctcggc gctagggtcg tgccgtgtcc
      601 aacggcagca ccgcctccga gtgggttccc accgggtcgg tcaccgtgcg ggtgcccggc
      661 aaggtcaacc tgtacctggc cgtcggcgat cggcgcgagg acggctatca cgagctgacc
      721 accgtcttcc acgccgtctc gctgctcgac gaggtcaccg tccgcaacgc cgacgtgctt
      781 tcgctggagc tggcggggga gggcgcggag tcgctacccg ccgacgagcg gaacctggcg
      841 tggcaggccg ccgagttgat ggccgagcac gtcggccggg ctcccgacgt cgcgatcacc
      901 gttgagaagt cgatccccgt cgcgggcggt atggcgggcg gcagcgccga cgcggcggcg
      961 gtgctggtcg cgatcaactc cctttgggag ctcggcgtgc cgcgccgcga cctgcacgca
     1021 ctggccgccc ggttgggcag cgatgtgccg ttcgccctgc atggcggcac tgcgctgggc
     1081 accgggcgcg gcgaggagct ggcgaccgtg ctggccagga gcacctttca ctgggtactg
     1141 gcgttcgccg acggcggcct gtccacccct gccgtgttcg ccgagatcga ccggcttcgc
     1201 gagtcggccg accggagcct gccgtcgccg ctggaggacc ccgagcccgt gctggccgcc
     1261 ctggcctcgg gcgatccctc cgccctagcg ccgctgctgg gcaacgatct gcagccggcg
     1321 acgctgagcc tcgatccggg tctgcgccgg acgctgcggg ccggtgtgga ggcaggcgcc
     1381 ctggccggga tcgtgtccgg ctcgggcccg acgtgcgcgt tcctgtgccc ctcgtccacg
     1441 tcggcggttg acatcggcgc cgaactggcc ggagccggag tgtgtcgcac ggtgcgggtg
     1501 gccagcggtc cggttcaggg cgcgcgggtg gttcccgccc ccacgccgca gatgtgacac
     1561 gagcctcatt tactgcatta gtttggtagt tacttaagag ttgcttaaga tgagcgacgg
     1621 tgaaaactag cggtctagaa acgggcgcga atactgccgc cgccggacat tccggtgggc
     1681 gggcgttccg tcctagcgaa tcaccgaatc gagacttaat cgcgctccaa atgtgtgcgc
     1741 gcctacgtga aagcgtcgtc taccgggcgg agcattacac actggcattt gcgggagacc
     1801 cgaggaggct gtcgtgagca gattcaccga caagatgtac cgcagcgccc gtaacgcgac
     1861 tacgggcatg gtcaccggtg aaccgcacga acccgtccgc cacacctggg gtgaggtgca
     1921 cgagagggcc cgccggatcg ccggtggcct tgccgcagcg ggcatcgcgc acggagacgc
     1981 cgtcggcgtg ctggcgggct tccccgtgga gatcgcgccg accgcccagg gt
//
LOCUS       DASSYW010000518         2692 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_36857, whole genome shotgun sequence.
ACCESSION   DASSYW010000518 DASSYW010000000
VERSION     DASSYW010000518.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2692)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2692)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2692
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36857"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..917
                     /gene="ispE"
                     /locus_tag="VFN38_08260"
     CDS             <1..917
                     /gene="ispE"
                     /locus_tag="VFN38_08260"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: protein motif:HMM:TIGR00154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050515 - 4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase activity
                     [Evidence IEA];
                     GO_process: GO:0016114 - terpenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HET9011796.1"
                     /translation="RGARAVQVAAQAKVNLRLRILARETTGFHQLETLFLRLQLADTV
                     RVRRTSAARSLDVSGEADPAALGPTERNLAWRAAVAYADVAGWSDGFAIELEKRIPIG
                     GGLGGGSADAGAVLRAMDAMAARPVGEAALLRIAFTLGADVPFVTSSHAYALAWGRGE
                     RLLALKPPPRRPVVLLVPSFRVETKEAYGWLEAPRASSMPVGDATGVLKPSALASWKQ
                     IAAMAVNDFEPVVGTRHPEITALVNGLREMGCAPAMLSGSGSVVFGVHPGENLGVRFV
                     DAGADGETAVHAVVTSSADSVEPVVSLD"
     gene            943..1013
                     /locus_tag="VFN38_08265"
     tRNA            943..1013
                     /locus_tag="VFN38_08265"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:975..977,aa:Gln,seq:ttg)
     gene            1074..2027
                     /locus_tag="VFN38_08270"
                     /pseudo
     CDS             1074..2027
                     /locus_tag="VFN38_08270"
                     /inference="COORDINATES: protein motif:HMM:NF025165.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004749 - ribose phosphate diphosphokinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0006015 - 5-phosphoribose 1-diphosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009156 - ribonucleoside monophosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009165 - nucleotide biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
     gene            2220..>2692
                     /locus_tag="VFN38_08275"
     CDS             2220..>2692
                     /locus_tag="VFN38_08275"
                     /inference="COORDINATES: protein motif:HMM:TIGR00731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0008097 - 5S rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25"
                     /protein_id="HET9011797.1"
                     /translation="MASASLSAEMRNDRGKGVARKLRAAGRVPGVVYGHGREPQSLSL
                     VARDLDKLLSQIAAGSTVIELTLGRATTKTLIREIQRHPFKKQILHIDFMELVAGEKV
                     IVDIPLVFVGVPEGVRLCGALLEQIVHSIEVNVDPSSIPNHIDVDVTNLAMGHSL"
BASE COUNT          425 a          909 c          937 g          421 t
ORIGIN      
        1 tgcgaggggc gcgcgccgtg caggtggccg cgcaggccaa ggtcaacctt cgcctgcgca
       61 tcctcgcccg ggagacgacc gggttccatc agctcgagac gctgttcctg cggctccagc
      121 tcgccgacac ggtccgcgtg cgacgtacga gcgcggcgcg ctcgctcgac gtctcgggcg
      181 aggcggatcc ggcggccctc ggccccaccg agcggaatct cgcctggcgg gccgccgtgg
      241 cctatgcgga cgtcgcgggt tggagcgacg gcttcgccat cgagctcgag aagcggattc
      301 ccatcggcgg cgggcttggt ggcggcagcg cggacgccgg cgcggtgctg cgcgcgatgg
      361 acgccatggc ggctcgcccc gtcggcgagg cggcgctgct gcgcatcgcc ttcacgctcg
      421 gtgcggacgt ccccttcgtc acctcgtcgc atgcgtacgc gctcgcgtgg ggacgcggcg
      481 agcgactcct cgccctcaag ccgccgccgc ggcggcccgt cgtgctgctc gtcccctcgt
      541 tccgtgtcga gacgaaggag gcgtacggat ggctcgaggc gccgcgggcg tcctcgatgc
      601 ccgtcggcga cgcgaccggc gtcctcaagc cgagcgcgct ggcctcgtgg aagcagatcg
      661 ccgcgatggc cgtgaacgac ttcgagccgg tggtcggcac ccggcatccg gagatcacgg
      721 cgctcgtgaa cgggctgcgc gagatgggct gcgcgcccgc gatgctgagc ggctcgggct
      781 cggtggtgtt cggcgtgcac ccgggcgaga acctcggcgt ccggttcgtg gacgccggcg
      841 ccgatggcga gaccgccgtg cacgccgtcg tcacgagctc cgccgattca gttgagccgg
      901 tcgtctcgct cgactaggtt tgagggctga gatcggccag cttgcccctt cgtccaatgg
      961 caggacagtg gcctttggag ccacgaatct tggttcgaat ccaagagggg caatcggcgc
     1021 cagccgtcgg gtttgaccaa gtcgctgtcc cacattactt tacaaggctc tgcatggacg
     1081 ggctcgccgt accggcgcac gggttcaagc tgttggcggg cacgggcaac cgcccgctcg
     1141 ccgaggagat cgccaggcag ctcggcatcg acctctgcaa gctgacctgc acgcggttcg
     1201 ctgatggcga gatcttcgtg cggatcgatg agaacgtccg cggcaacgac gtcttcatcg
     1261 tgcagccgac gaacgcgccg gccgagaaca tcatggagct gctgctcctg atcgacgcgg
     1321 cgcggcgggc cagctcggcg cgcatcaccg tggtgatgcc gtactagggc tattcgcggc
     1381 aggaccgcaa ggaccagccg cgggtggcga tcggcgccaa gctcatggcg aacatgatca
     1441 tgagcgccgg cgccgatcgc gtgctcggaa tcgattttca tcagcaccag ctgcaggggt
     1501 tcttcgacat ccccgtcgat catctctacg cgatgccggt gctgagcgga tacttcaagc
     1561 ggaagcagtt gaaggaagtg gtcatcgtgg cacccgacgt cggggcggcc aagatggcgc
     1621 gcggattcgc gaagcggctg gacgcctccc tggcgatcat cgacaagcga cgcccgcgcg
     1681 cgaacgtgag cgaggtggtg aacgtggtcg gcgaggtgga ggggcgggat tgcatcctcg
     1741 ccgacgacat gatcgatacg gcgggcacgg tctgcgaggc ggcacgcgcc ctcacgcgcc
     1801 tcggcgcccg ggacgtgtac gtctgcgcca cgcacggcct gctcagcggg ccggcggtgg
     1861 agcggatcac cgactcgccg atcaaggaag tggtgatcac ggacacgatt ctcacgccgc
     1921 cggagaagcg gttcgagaag ctgaccgtgc tgtcggtggg cgagctgttg agcaaggcga
     1981 tccgctatac gcacgccgag cagtcggtga gctcgatgtt cgactagatt gtcgtcctga
     2041 gcgaggcgaa ggacctgcac gtgcgggtcc ctcgccatgg gctcgggacg acacgaagga
     2101 ccccgcgatt cgccgccagt gggcggcacc ggcatggtag ggcggacgca gccgcctgag
     2161 agtagcaccg ggatcgcggt tcgctgcagt cgaagacgct tcacgaagga catcagcaca
     2221 tggcatccgc atccctcagc gccgaaatgc gcaacgaccg cggcaagggc gtcgcgcgca
     2281 agctccgcgc ggccggccgc gttcccggcg tcgtgtacgg ccacggccgc gagccgcagt
     2341 cgctctcgct cgtcgcccgt gatctcgaca agctcctctc gcagatcgcc gccggcagca
     2401 cggtcatcga gctcacgctc ggccgcgcca ccaccaagac gctcatccgc gagatccagc
     2461 ggcacccgtt caagaagcag atcctccaca tcgacttcat ggagctcgtg gccggcgaga
     2521 aggtcatcgt cgacatcccg ctcgtgttcg tcggcgtgcc cgagggcgtt cgcctctgcg
     2581 gcgccctgct cgagcagatc gtgcacagca tcgaggtcaa cgtcgatccg tccagcatcc
     2641 cgaaccacat cgacgtcgac gtcaccaacc tcgccatggg gcactcgctc ca
//
LOCUS       DASSYW010000519         2509 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_628042, whole genome shotgun sequence.
ACCESSION   DASSYW010000519 DASSYW010000000
VERSION     DASSYW010000519.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2509)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2509)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2509
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_628042"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..418
                     /locus_tag="VFN38_08280"
     CDS             <1..418
                     /locus_tag="VFN38_08280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="secretion protein HlyD"
                     /protein_id="HET9011798.1"
                     /translation="SVAAAGAMASLIPADTRLQAQLFAPSSAIGFVRPAQTVMLRYQA
                     FPYQKFGHQSGRVVQVSKAPLQPSEVAAMPLAGVAASSEPLYRITVQLDRQDVAAYGA
                     PQALAPGMQLDADVVLDRRRLIEWIFEPVLGIAGRV"
     gene            415..>2509
                     /locus_tag="VFN38_08285"
     CDS             415..>2509
                     /locus_tag="VFN38_08285"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase domain-containing ABC transporter"
                     /protein_id="HET9011799.1"
                     /translation="MSTASPLDALSLFGARRRLPMILQTEGAECGLACLAMIAARHGF
                     DSDLATLRRRFSVSMKGATMADLVRVAGQLQLNPRAVRVEMEHLPQLELPCVLHWDLN
                     HFVVLKEIVGGKAVIHDPARGVRRLPMEEVSRHFTGIALELTPEADFRPGVEKQTVGL
                     RQLLGRVSGLKRSLAQIFLLALALEAFVLLTPFYLQWVVDGVLVSNDRDLLVTLGIGF
                     GLLVLIQVGAGAIRSWAVLHLSSTLNLQWLGNVFAHLMRLPVSWFDRRHTGDVMSRFG
                     AVQRIQKTMTTSFVEAVLDGLLVVVTLGMMLIYSGTLAAIALASVVAYGVLRRVFFRP
                     QREATEEAIVFDAKRSTHFLESLRGVQSIKLFNRQADRQARFMNLVVDAMNADLVTRK
                     LDLLFGVLQKLLFGVERVAVIWVGALLVLDHKFSVGMLFAFLAYREQFALRVGALIDK
                     AIDIKMLRLEGERLADIVLAEPEPVADAVAARLGEGTPTLEAVDVGFTYSASEEPVLR
                     RINLRIEPGDAVAIVGPSGCGKTTLLKCLLGIHAPQAGRIRVGGIDLQQLGLREWRDM
                     VGTVMQEDQLFAGSIIDNITFFDVNADTAWAEQCARVAAIADEIEAMPMGWHTLVGDM
                     GTSLSGGQRQRILLARALYKRPKFLFLDEVTSALDVEREREVNAAIRQLDITRVIVAH
                     RPETIASAGRVIVLQE"
BASE COUNT          352 a          875 c          866 g          416 t
ORIGIN      
        1 gagcgtcgcc gcggcggggg cgatggcgag cctgatcccg gccgatacgc gcctgcaggc
       61 gcagctcttc gcgccctcga gcgcgatcgg cttcgtccgg cctgcgcaga cggtcatgct
      121 tcgctaccag gccttcccgt accagaagtt cggccaccag agcggccgcg tcgtgcaggt
      181 gtcgaaggcg ccgctgcagc cctccgaggt cgcggcgatg cctctggcgg gcgtcgcggc
      241 ctcgtccgag ccgctctacc gcatcaccgt gcagctcgac cgccaggatg tggccgcgta
      301 cggcgcgccg caggccctgg cgcccggcat gcagctcgac gccgacgtcg tgctcgaccg
      361 ccgccgcctg atcgagtgga tcttcgagcc cgtgctcggc atcgcgggcc gggtatgagc
      421 accgcttcgc ccctcgacgc gctgagcctg ttcggcgcgc gccgacgact gccgatgatc
      481 ctgcagaccg agggcgccga atgcggcctc gcctgcctcg cgatgatcgc cgcgcggcac
      541 ggcttcgaca gcgacctggc aacgctgcgc cggcgcttct cggtctcgat gaagggcgcg
      601 acgatggccg acctggtccg cgtcgccggc cagctgcagc tgaacccgcg cgcggtccgc
      661 gtcgagatgg agcacctgcc gcagctcgag ctgccgtgcg tgctgcactg ggacctgaac
      721 cacttcgtcg tgctcaagga aattgtcggg ggcaaggcgg tcatccacga cccggcccgg
      781 ggcgtgcgcc ggctgccgat ggaggaggtc tcgcgccact tcaccggcat cgccctcgag
      841 ctcacgccgg aggccgactt ccgccccggg gtcgagaagc agacggtggg gctgcgccag
      901 ttgctcggcc gggtgagcgg cctgaagcgc tcgctcgcgc agatctttct cctcgccctc
      961 gccctcgagg ccttcgtcct gctcacgccg ttctacctgc aatgggtcgt cgacggcgtg
     1021 ctggtgagca atgaccgcga cctgctcgtc accctgggga tcggcttcgg cctcctggtg
     1081 ctgatccagg tgggcgccgg agccatccgg tcctgggcgg tgctgcacct ctcgtcgacg
     1141 ctcaacctgc agtggctcgg caatgtcttc gcgcacctga tgcgcctgcc ggtgagctgg
     1201 ttcgatcgcc gccacaccgg ggacgtgatg tcgcgcttcg gcgccgtcca gcgcatccag
     1261 aagacgatga ccacgagctt cgtcgaggcg gtgctcgacg gcctgctggt cgtcgtcacg
     1321 ctcgggatga tgctgatcta cagcgggacg ctcgcggcga tcgccctcgc cagcgtcgtc
     1381 gcctacggcg tgctgcgccg cgtgttcttc cggccgcagc gcgaggcgac cgaggaggcg
     1441 atcgtcttcg atgccaagcg ctcgacgcac ttcctcgagt cgcttcgcgg cgtgcagtcg
     1501 atcaagctct tcaaccgcca ggccgaccgg caggcgcggt tcatgaacct cgtcgtcgac
     1561 gcgatgaacg ccgacctcgt gacgcgcaag ctcgacctgc ttttcggcgt gctgcagaag
     1621 ctgctgttcg gggtcgagcg ggtggcggtg atctgggtcg gcgcgctgct cgtgctcgac
     1681 cacaagttct cggtcgggat gctgttcgcc ttcctcgcct accgcgagca gttcgcgctg
     1741 cgcgtcggcg ccctgatcga caaggcgatc gacatcaaga tgctgcgcct ggaaggcgag
     1801 cggctcgccg acatcgtgct ggccgagccc gagccggtgg ccgacgcggt cgcggcacgg
     1861 ctcggcgaag ggacgccgac actcgaggcc gtcgacgtcg gcttcaccta ttcggcgagc
     1921 gaagaaccgg tcctgcgcag gatcaacctg cgcatcgagc ccggcgacgc ggtggcgatc
     1981 gtgggtccct caggctgcgg caagactacc ttgctgaagt gtcttctcgg catccacgcg
     2041 ccgcaggccg gccgtatccg tgtcggcggc atcgacctgc agcagctggg cctgcgcgag
     2101 tggcgcgaca tggtcggcac cgtgatgcag gaagaccagc tcttcgccgg ctcgatcatc
     2161 gacaacatca ccttcttcga cgtcaacgcc gatacggcct gggcggagca atgcgcgagg
     2221 gtggcggcga tcgccgacga gatcgaggcg atgccgatgg gctggcacac cctggtcggc
     2281 gacatgggga cgagcctttc gggggggcag cgccagcgca tcctcctcgc gcgcgcgctc
     2341 tacaagcggc cgaaattcct tttcctcgac gaggtgacga gcgcgctgga cgtcgagcgc
     2401 gagcgcgagg tcaacgccgc gatccgccag ctcgacatca cccgggtcat cgtcgcgcat
     2461 cgaccggaaa ccattgcttc ggcggggcgg gtgatcgtgc tgcaggaag
//
LOCUS       DASSYW010000520         2405 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1295648, whole genome shotgun sequence.
ACCESSION   DASSYW010000520 DASSYW010000000
VERSION     DASSYW010000520.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2405)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2405)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2405
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1295648"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..618
                     /locus_tag="VFN38_08290"
     CDS             <1..618
                     /locus_tag="VFN38_08290"
                     /inference="COORDINATES: protein motif:HMM:NF015566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HET9011800.1"
                     /translation="LVSVPQAMLARPVVAGAVAGWLAGDVEAGLRVGVLFELFALDVL
                     PVGAVRYPDYGPATVAATALATDSPWQFALGVSAALGLVLAVLGGFSLSAVRRANARG
                     IQRNSAALAAGESGAIRRLQYASLARDAARAGGLTALGLACAWVMAEPVAGMDRSTGL
                     GLTLVALGCALSAAIGGAIRSAGRGPRLRWLGAGALVGLLTAALR"
     gene            615..1349
                     /locus_tag="VFN38_08295"
     CDS             615..1349
                     /locus_tag="VFN38_08295"
                     /inference="COORDINATES: protein motif:HMM:NF015570.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS system mannose/fructose/sorbose family
                     transporter subunit IID"
                     /protein_id="HET9011801.1"
                     /translation="MNGGWRAWLRLFAVQGTWNYERMLGVGMGYAAEPLLDDLKTVDP
                     VRHTEAVVRSAEFFNCHPNLAGLALGATARAEYDGVPGAQITRLRTALCSPLGALGDQ
                     LFWAGLVPLLVAAALVGIVLGARWWAVLGFLVLYNAARVATGVWSLRTGLDAGMGVGG
                     AIAKSWISGAIERVAPAAGFAIGIAIPLVGDWYLKVIGWPGALGALAVAATGVAVTRW
                     FGAALTAVRFALLALVLLVLFRRVLP"
     gene            1346..1612
                     /locus_tag="VFN38_08300"
     CDS             1346..1612
                     /locus_tag="VFN38_08300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr family phosphocarrier protein"
                     /protein_id="HET9011802.1"
                     /translation="MIEREATIVNQDGLHARPAAKIVRLASTFNSEVELFKDGTAVNA
                     KSIMGVMMLAAECGSSITIRADGPDAEQAVNAIGQLVAEGFGEP"
     gene            1609..>2405
                     /locus_tag="VFN38_08305"
     CDS             1609..>2405
                     /locus_tag="VFN38_08305"
                     /inference="COORDINATES: protein motif:HMM:NF017346.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate-utilizing N-terminal
                     domain-containing protein"
                     /protein_id="HET9011803.1"
                     /translation="MSGSRVIRGIGVSPGVVVAPALIVQWDFPEVPDRAVRPDQVEDE
                     VTRLREAVEEVVAHLNDLGQKVLRRAGPEEARIFDAQILMAQDQEFLNSVEFLIRNNQ
                     LSAETAYEFKALELRNLWSGAARLRERLADLNAIQFRMISRLMGRSAAELGAISPDEH
                     VIVVAHELSPGLTVQLDREHVVGLVSEEGTRTAHAAILAHSLGIPAVMGAVGALARIP
                     DGTTLLLDGQSGVIVLDPTLDELEDAKTQVSRRNRLELQLEGIVDQPA"
BASE COUNT          301 a          825 c          908 g          371 t
ORIGIN      
        1 ctcgtgagcg tgccccaggc gatgctcgcg cggcccgtgg tcgcgggcgc ggtcgcggga
       61 tggctcgccg gcgatgtgga ggcggggctt cgcgtgggcg tgctgttcga gctgttcgcg
      121 ctcgacgtgc tgccggtagg cgcggtccgc taccccgact acggtccggc gaccgtcgcc
      181 gccaccgcgc tggcgaccga ctcgccatgg cagttcgccc tcggcgtgag cgcggcgctg
      241 ggactggtcc tcgcggtgct cggcggcttc agcctctcgg cggtgcgccg cgccaacgcg
      301 cgaggcatcc agcggaactc ggcggcgttg gccgccgggg agagcggcgc gatccggcga
      361 ctgcagtacg cctcgctcgc gcgtgatgcg gcgcgggccg gagggctgac cgccctgggg
      421 ctcgcctgcg cgtgggtgat ggcggagccg gtcgccggga tggaccgctc caccgggctg
      481 gggctcaccc tggtcgcctt aggctgcgcc ctgtcggcag ccatcggcgg agcgatccgg
      541 agcgccggcc gcggcccccg gcttcggtgg ctgggtgcgg gcgcgctggt cggtcttctc
      601 accgcggccc tgcgatgaac ggcgggtggc gcgcgtggct gcggctcttc gcggtgcagg
      661 ggacctggaa ctacgagcgg atgctgggcg tggggatggg ctacgccgct gagccgctgc
      721 tggacgacct gaagaccgtc gaccccgtgc ggcacacgga ggccgtggtg cgatcggcgg
      781 agttcttcaa ctgtcacccc aacctggccg gtctcgcgct cggcgccacc gcacgcgcgg
      841 agtacgacgg ggtgccaggt gcgcagatca cgagactgcg gaccgcgctc tgcagcccgt
      901 tgggggcgct gggcgaccag ctcttctggg ccggtctcgt gccccttctg gtcgccgccg
      961 cgctggtcgg catcgtgctc ggcgcgcgct ggtgggcggt gctcggattt ctggtgctct
     1021 acaatgcggc acgagtggcc accggagtgt ggtcgctccg cacgggactc gatgccggca
     1081 tgggggtggg cggcgccatc gcgaagtcct ggatctccgg cgccatcgag cgggtggccc
     1141 ccgccgccgg gttcgccatc ggcatcgcca tccccctggt cggcgactgg tacctaaagg
     1201 tcatcggctg gcccggcgct ctcggcgcgc tcgcggtggc cgcgacgggc gtggcggtga
     1261 cccggtggtt cggcgccgcc cttaccgcag tacgcttcgc gctcctcgcg ctcgtcctcc
     1321 tggtgctctt ccgccgggtg ctgccgtgat cgagcgagag gccaccatcg tgaaccagga
     1381 tgggctccac gcccggccgg cggccaagat cgtccgcctg gccagcacct tcaattccga
     1441 ggtcgagctg ttcaaggatg gcacggcggt gaacgccaag agcatcatgg gcgtcatgat
     1501 gctggccgcg gagtgcggca gctccatcac gatccgggct gacggccccg atgcggagca
     1561 ggcggtgaac gcgatcggcc agttggtggc ggaaggcttc ggagagccgt gagcggatca
     1621 cgggtcatcc ggggcatcgg cgtttcgccg ggcgtcgtcg tggcgcccgc gctgatcgtc
     1681 cagtgggact tccccgaggt ccccgaccga gccgtgcgtc ccgaccaggt ggaggacgag
     1741 gtcacgcgtc tgcgcgaggc cgtcgaggaa gtcgtcgccc acctgaacga cctgggccag
     1801 aaggtgctcc ggcgcgccgg ccccgaggag gccaggatct tcgacgcgca gatcctgatg
     1861 gcccaggacc aggagtttct caactcggtc gagttcctga tccggaacaa ccagctcagc
     1921 gcggagacgg cctacgagtt caaggcgctg gagctgcgga acctctggtc gggcgccgcg
     1981 cgcctgcggg agcggctggc cgatctcaac gccatccagt tccggatgat cagccgcctg
     2041 atgggacgga gcgccgccga gctcggcgcc atctctcccg acgagcacgt gatcgtggtg
     2101 gcgcacgagc tgtcgccggg gctgaccgtg cagctcgacc gggagcacgt cgtgggcctg
     2161 gtgagcgagg agggcacgcg caccgcccac gcggccattc tcgcccacag cctgggcatc
     2221 cccgccgtca tgggcgcggt cggtgccctg gcgcgtatac ccgacgggac cacgctgctg
     2281 ctggatggac agagcggcgt catcgttctc gacccgaccc tggacgagct cgaggacgcc
     2341 aagacccagg tcagccgccg gaaccggctc gagctccagc tcgagggcat cgtggaccag
     2401 ccggc
//
LOCUS       DASSYW010000521         2087 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_311850, whole genome shotgun sequence.
ACCESSION   DASSYW010000521 DASSYW010000000
VERSION     DASSYW010000521.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2087)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2087)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2087
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_311850"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(169..1287)
                     /locus_tag="VFN38_08310"
     CDS             complement(169..1287)
                     /locus_tag="VFN38_08310"
                     /inference="COORDINATES: protein motif:HMM:NF019896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-Ala-D-Ala carboxypeptidase family
                     metallohydrolase"
                     /protein_id="HET9011804.1"
                     /translation="MPVSDPQPTDDTSRISPLPTAERRASRARRRARRQISLTTVGVF
                     VAGALGVINFYHPGQPLLRPPFVSIAEAAAPAASPSANAFGKSGEVRVRFSLPDQAVE
                     YPIDVQGDPRSLAYQWVRVGDTLATAALRPLAGNVVAPSAPGFYRLALARTALDSASG
                     RARVTERRVVDGMTLAVLVPFSQKLGATLNGYRIGTYLAERLKGSSHDHPEGFVQVGE
                     EDVDLPLSKHLRLGDFVTHDAQDTWPRYAALNPQLLDKLELVLAEIASWRGDTANVNV
                     GVDVHSGFRTPLYNRTVKRSAKDSRHQYGDAADVTIDANGDGRYTAADTKLVVRAVEV
                     VEGRHPELTGGLGLYTSRRYSTPYVHIDARGTRARWHG"
     gene            complement(1287..>2087)
                     /locus_tag="VFN38_08315"
     CDS             complement(1287..>2087)
                     /locus_tag="VFN38_08315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011805.1"
                     /translation="RALADSLRGRSGKLRARFLIPGRDLVMAALDRVFGDSAHGQASV
                     LSVSDSASRRGFSFIPLLPFELKSGGRLASYRVGFWPAEKRVARSAAYENPEGFIQVT
                     PENQDTYVSEHFRLRDFLTHDQEGVWPKYLVLREDLVDKLELVIADLEAHGTPVRHMV
                     VMSGFRTPQYNARGVGRGGRAKDSRHQFGDAADVFVDNDGDGRMDDLNHDRRVDARDA
                     QVIINAVERVESAHPDLTGGAGRYRATRAHGPFAHIDTRGTRARWGSA"
BASE COUNT          292 a          721 c          767 g          307 t
ORIGIN      
        1 gagcgcaggg attcgagagt cgggagcggc tggcgctccc cgggatcact tcttacgcca
       61 ctccctcccc aatgttactc gggcgccccg ccgggcccag ggtgcgggga aaaaacagaa
      121 gggggccgca tcgcggcccc cttcgactcc cgctccccgg caggcgcctc acccgtgcca
      181 gcgggcgcgc gtcccccggg cgtcgatatg gacgtagggg gtgctgtagc ggcggctcgt
      241 gtagagcccg agtccccccg tcagctccgg gtgccgcccc tccacgacct ccacggcccg
      301 cacgacgagc ttcgtgtcgg ccgcggtgta gcggccgtcc ccgttggcgt cgatcgtgac
      361 gtcggccgcg tcgccgtact ggtgacggct gtccttcgcc gagcgcttga ccgtgcggtt
      421 gtagagcggc gtgcggaagc ccgaatggac gtccacgccg acgttcacgt tggccgtgtc
      481 gccgcgccag ctggcgatct cggcgagcac gagctcgagc ttgtcgagca gctgcgggtt
      541 gagcgcggcg tagcggggcc aggtgtcctg cgcgtcgtgg gtcacgaagt ctcccagccg
      601 caggtgcttg ctgagcggca ggtcgacgtc ttcctcaccc acctggacga agccttcggg
      661 gtggtcgtgc gagctcccct tgagacgctc ggcgaggtac gtcccgatcc gatagccgtt
      721 gagcgtcgcg ccgagcttct gcgagaaggg cacgagcacg gcgagcgtca tcccgtccac
      781 cacgcggcgc tcggtgacgc gcgcccgtcc gcttgcactg tcgagcgccg tgcgggccag
      841 cgcgagccgg tagaagccgg gcgccgacgg cgccacgacg ttgccggcca gagggcgcag
      901 cgcggcggtc gccaacgtgt cccccacccg cacccactga taggcgagcg agcgcggatc
      961 gccctgcacg tcgatcggat actcgaccgc ctggtccggc agggagaagc gcacgcgcac
     1021 ctcgccgctc ttgccgaagg cgttcgccga cgggctcgcc gccggcgccg ccgcctcggc
     1081 gatgctgacg aacggggggc gaaggagggg ctggcccggg tgatagaagt tgatgacacc
     1141 caacgcgccg gcgacgaaga cgccgaccgt ggtcaggctg atctgccggc gggcgcggcg
     1201 ccgagcgcgc gacgcccggc gctcggcggt ggggagagga ctgattctac tcgtgtcgtc
     1261 cgtgggctgc gggtcgctca cgggcatcac gcgctccccc agcgagcgcg ggtaccacgc
     1321 gtgtcgatgt gggcgaacgg accgtgggcg cgcgtcgcgc ggtagcgtcc agcgcccccc
     1381 gtcagatctg gatgcgcgct ttcgacccgc tcgacggcat tgatgatcac ctgcgcgtcg
     1441 cgcgcgtcga cgcggcgatc gtggttcagg tcatccatgc ggccgtcgcc gtcgttgtcc
     1501 acgaagacgt cagcggcgtc gccgaactgg tggcggctgt ctttcgctcg cccgccgcgc
     1561 ccgacgcccc gtgcgttgta ctggggcgtc cggaagccgg acatgacgac catgtggcga
     1621 acgggggtcc cgtgggcctc cagatcggcg atgacgagct ccagcttgtc gacgaggtcc
     1681 tctcgcagca cgagatactt cggccacacc ccctcctggt cgtgcgtcag gaaatcgcgg
     1741 aggcggaagt gctcggagac gtaggtgtcc tgattctccg gggtgacctg gatgaacccc
     1801 tcggggttct cgtaggccgc cgaccgcgcc acacgcttct cggcgggcca gaagcccacg
     1861 cggtagctgg cgaggcgccc gccgctcttc agctcgaagg ggaggagcgg aatgaaggag
     1921 aagccgcgac gcgaggcgct gtcgctgacg gaaagcacgc tcgcctggcc gtgggccgag
     1981 tcgccgaaga cgcggtcgag ggccgccatg accaggtcgc gcccggggat caggaagcgg
     2041 gcgcgcagct tgccgctgcg gccgcgcagc gagtcggcga gggcgcg
//
LOCUS       DASSYW010000522         2077 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_362675, whole genome shotgun sequence.
ACCESSION   DASSYW010000522 DASSYW010000000
VERSION     DASSYW010000522.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2077)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2077)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2077
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_362675"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(354..1658)
                     /locus_tag="VFN38_08320"
     CDS             complement(354..1658)
                     /locus_tag="VFN38_08320"
                     /inference="COORDINATES: protein motif:HMM:NF012385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HET9011806.1"
                     /translation="MSLPTRVLVVDALGARAGAVVELLAPAGYEAWHTPHPAAAPGSA
                     DLVLLSSDAVDPAAVRRLASALPDADLLLLVDEPPHPRTREALRAGTCDLVERAAGPD
                     ALLVAVERAAREGRNRRELAVLRARVGDEARRALVGSSPGMTLVRELAGRAAASRRTV
                     LVTGEPGAGKSTVARVVHDLSERAARPFVIARCEGVDAEALERDLFGADRPGLLHTAR
                     GGTLVLDEVGALPRALYARLAATLADGVVRRAGAPDGQPADVRIVLTARTSEDEPTVD
                     AGQLLGDRNVLPIALPPLRERRRDIPMLVRHFRERLGHERGSVLPPLGPDTMAPLLAH
                     HWPGNVRELEHWMERIALAAAGEAADHPRRAVVAPGAVFASLDAARLTLDALERKYIL
                     HVLAQEGGHQSRAAERLGIDRRTLYRKLKEYREDGVAVRVTG"
     gene            complement(1750..>2077)
                     /locus_tag="VFN38_08325"
     CDS             complement(1750..>2077)
                     /locus_tag="VFN38_08325"
                     /inference="COORDINATES: protein motif:HMM:NF013424.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="undecaprenyl diphosphate synthase family
                     protein"
                     /protein_id="HET9011807.1"
                     /translation="VAVDYSGRDAVLRAAAAMRGDAVTREGFSELLAHVDHDRLPARD
                     VDLVVRTGGEQRLSDFLLWECAYAELLFVKKMWPEFTADDLSQALADFRGRNRRFGLA
                     PEQVAS"
BASE COUNT          270 a          779 c          773 g          255 t
ORIGIN      
        1 cccgccgcca ggtaaccgag agccttcagc agctttcgca tcgggatcgt catcctcggg
       61 ccaccgcggg cccccggggg ttcaccagcg gcgcgccgaa gcgacgcgcc gtggccggcc
      121 gcggaccatg tccgcctgcg aggtgcgtcc cgcgggagcg cgcctcgccc ggtaaggccg
      181 acgtacggtt cctcgccggt tcaggattca gaggtccggg ccgccaccac tgtcggctgg
      241 caggtcggcg gtcgccgcgc cgttcgacct tcggggaccg tcatgtccgc ccgtgccctc
      301 cgccccgccg ggacgagggc ccgggccggg tgcgccctct ccggtgctgg tcgctatccg
      361 gtgacgcgca cggcgacgcc atcctcgcga tactccttga gcttgcgata gagcgtccgc
      421 cggtcgatgc cgagccgctc ggcggcgcgg ctctggtgtc caccctcctg cgcgagcacg
      481 tgcaggatgt acttccgctc cagggcgtcg agggtgaggc gcgccgcgtc gagcgacgcg
      541 aaaacggcgc cgggcgcgac caccgcgcga cgcggatgat ccgccgcctc gcccgcggcg
      601 gcgagggcga tgcgttccat ccagtgctcg agctcgcgga cgttgcccgg ccagtggtgc
      661 gcgagcagcg gtgccatcgt gtccggccca agtggcggca ggacgctccc gcgctcgtgc
      721 ccgaggcgct cgcgaaagtg tcgcacgagc atcgggatgt cgcgacgccg ctcgcgcaat
      781 ggcggcagcg cgatggggag cacgttgcgg tcgcccagga gctggcccgc atccaccgtg
      841 ggctcgtctt ccgaggtgcg cgcagtgagc acgatgcgca cgtccgccgg ctggccgtcc
      901 ggcgcgccgg cgcggcgcac gacaccgtcg gcgagggtgg ccgcgagccg ggcgtagagg
      961 gcgcgcggca gtgcccccac ctcgtcgagc accagcgttc ccccgcgggc cgtgtggagc
     1021 aggccgggac gatcggcgcc gaacaggtcc ctctccagcg cctccgcgtc gaccccttcg
     1081 cagcgcgcga tcacgaacgg acgggcggcg cgctcggaca ggtcgtgcac cacgcgggcg
     1141 accgtgctct tcccggcgcc cggctcgccg gtcaccagca cggtacgccg cgacgcggcg
     1201 gcgcgtcccg ccagctcgcg cacgagcgtc atgccgggcg agctgccgac cagcgcccgc
     1261 cgcgcctcgt cgccgacacg cgcgcgcagc acggcgagct cgcgacggtt ccgcccctcg
     1321 cgggccgccc gctccaccgc gacgagcagc gcatcggggc cggccgcgcg ctcgacgagg
     1381 tcgcaggtgc ccgcgcgcag cgcctcgcgc gtgcgcgggt gcgggggctc gtcgacgagc
     1441 aggagcaggt cggcgtccgg cagcgccgat gcgagacgcc tcacggcggc cgggtccact
     1501 gcgtcgctgg acagaagcac gagatcggcg ctgccgggtg ccgcggccgg gtgcggcgtg
     1561 tgccaggcct cgtaaccggc aggcgcgagc agctcgacga cggcaccggc acgcgcgccc
     1621 agggcgtcca cgacgagcac gcgcgtagga agggacatgc ggattggcga gtggggaatc
     1681 ctcgccagct gttatcgacc gccgcgcgcc ggatgttgat cggcgtgcag gacggcggtc
     1741 agcgcgacgt caggaggcca cctgctcggg cgccaacccg aatcgcctgt tgcggccgcg
     1801 gaagtccgcg agagcctggc tcaggtcgtc cgccgtgaac tccggccaca tcttcttcac
     1861 gaacagcagc tcggcgtagg cgcactccca gagcaggaag tcgctcagcc gctgctcgcc
     1921 gcccgtgcgc acgacgagat ccacgtcgcg cgcgggaagc cggtcgtggt ccacgtgggc
     1981 gagcagctcg gagaatccct cgcgcgtcac ggcatcgccg cgcatcgccg ccgcggcgcg
     2041 gagcacggcg tcgcgcccgg agtagtcgac ggcgaca
//
LOCUS       DASSYW010000523         3494 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_737540, whole genome shotgun sequence.
ACCESSION   DASSYW010000523 DASSYW010000000
VERSION     DASSYW010000523.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3494)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3494)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3494
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_737540"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..556
                     /locus_tag="VFN38_08330"
     CDS             <1..556
                     /locus_tag="VFN38_08330"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HET9011808.1"
                     /translation="IVAASDDPTASAMVQEAFSNTRFRVYTHDDIIGVELGGSLKNVM
                     AVATGICEGAGFGFNSRAALITRGLAEMTRLGAAIGARPATFAGLAGMGDLVLTCTGS
                     LSRNRAVGVAVGGGATLDAALAGKETVAEGVATTKSALALAEREGVEMPIVSMVHRVL
                     FDGLPAHEGVVELMGRELRAEQDA"
     gene            553..927
                     /locus_tag="VFN38_08335"
     CDS             553..927
                     /locus_tag="VFN38_08335"
                     /inference="COORDINATES: protein motif:HMM:NF024803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HET9011809.1"
                     /translation="MSAAEPVQEFFSIGEVCELTDLKPHVLRYWESQFRFLNPAKNRS
                     GNRVYQRREVELILLVKHLLYTEKYTIEGARQKVDEQRKGGDLRSAARAALTLQTLDA
                     LEAELKELLRSLSPDDSPPNRK"
     gene            929..1690
                     /gene="surE"
                     /locus_tag="VFN38_08340"
     CDS             929..1690
                     /gene="surE"
                     /locus_tag="VFN38_08340"
                     /EC_number="3.1.3.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR00087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008252 - nucleotidase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HET9011810.1"
                     /translation="MRFLITNDDGILAHGIECLIEAAEPLGEVFVVAPDREQSATSHS
                     LTLHHPLRPVRRSEHRWQVDGTPTDCVMLAVEALLPERPDFVLSGINHGQNMGEDVLY
                     SGTVAAAMEGLALGIPSIAFSFAGGDLRADLTYLKQQVAILTPLLAHLTSLPAFPSHT
                     LLNVNLPPVPADGVRGARLTRLGSRVYSGSLKPMRDPWDRDIFWIGGGSITWSGEDNS
                     DFRAIQDGYVSITPLHLDLTNYSMLDSAGTWWREP"
     gene            1699..2334
                     /locus_tag="VFN38_08345"
     CDS             1699..2334
                     /locus_tag="VFN38_08345"
                     /EC_number="2.1.1.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004719 - protein-L-isoaspartate
                     (D-aspartate) O-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate(D-aspartate)
                     O-methyltransferase"
                     /protein_id="HET9011811.1"
                     /translation="MGGARRRLVETLREKGIRDLAVLRAFDLTRRHEFVPTGVRHRAY
                     EDAPLPIGSGQTISQPSIHARYLELLALKGSERVLEIGTGSGYQTVLLSHLVAQIFTI
                     ERIAALYTMARDAIARAGAKNVSMLLGDGTVGWREYAPYDAILVSAGGPSVPQPLVDQ
                     LADGGRMLVPVGAMEEQTLKLVTRRGAAIETRDVAPVRFVPLLGTHGWEQQ"
     gene            2335..2610
                     /locus_tag="VFN38_08350"
     CDS             2335..2610
                     /locus_tag="VFN38_08350"
                     /inference="COORDINATES: protein motif:HMM:NF012911.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylphosphatase"
                     /protein_id="HET9011812.1"
                     /translation="MQTLHVRISGKVQGVGFRWFVREEARRLGLSGWVTNLPGGEVEV
                     RAGGERGSLERLRRALQVGPSGAQVERVDDVAGDHAGTLPYPFNIHR"
     gene            2612..3145
                     /locus_tag="VFN38_08355"
     CDS             2612..3145
                     /locus_tag="VFN38_08355"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: protein motif:HMM:NF002636.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003999 - adenine
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HET9011813.1"
                     /translation="MAAADLSARLTRALRDVPDFPRPGIVFKDITPVLADASLFAETT
                     AAMAAAARALGVTHVAGIESRGFIFAAPIALALGAGFIPIRKPGKLPWRSVGREYALE
                     YGSDRLEMHVDALPRGARVLLVDDVLATGGTAAAAAALIEEVDGSVVACSFLLAIGAL
                     QGAERLRAWPVQVLLAV"
     gene            complement(3221..>3494)
                     /locus_tag="VFN38_08360"
     CDS             complement(3221..>3494)
                     /locus_tag="VFN38_08360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011814.1"
                     /translation="FLKKNKELLPVDQDKEAKVRSTFSKAILGRPLSAIISYWQQQIF
                     SGGDSPPVEKGSDAEVLAFVRNNPKAVGYVAVGTDLGTGVRAVTVQ"
BASE COUNT          512 a         1188 c         1260 g          534 t
ORIGIN      
        1 catcgtcgct gcctccgacg acccgacggc gagcgcgatg gtgcaggagg cgttcagcaa
       61 cactcgcttc cgcgtctaca cgcacgacga catcatcggt gtggagctgg gcggctcgct
      121 caagaacgtg atggccgtgg cgacgggcat ctgcgagggg gccggattcg ggttcaactc
      181 gcgcgccgcc ctcatcacgc gcgggctcgc cgagatgacg cgactgggcg ccgcgatcgg
      241 cgcgcgaccg gccaccttcg ccgggctggc ggggatgggc gatctcgtgc tgacctgcac
      301 cgggtcgctc agccgcaacc gcgcggtggg cgtggccgtg ggcggcggcg ccaccctcga
      361 cgcggccctg gcagggaagg agacggtggc ggagggcgtg gccacgacga agagcgcgct
      421 cgccctggcc gagcgcgagg gggtggagat gccgatcgtc tcgatggtcc atcgcgtcct
      481 gttcgacggg ctgccggcgc acgagggtgt cgtggagctg atggggcgcg agctgcgcgc
      541 ggagcaggac gcatgagtgc cgccgagccg gtccaggagt tcttcagcat cggcgaagtg
      601 tgcgagctca ccgacctcaa gccgcacgtg ctccggtact gggaaagcca gttccgcttt
      661 ctcaacccgg cgaagaaccg ctcgggcaat cgcgtctacc agcgccgcga agtggagctc
      721 atcctgctcg tgaagcacct cctgtacacc gagaagtaca ccatcgaagg cgcgcgacag
      781 aaggtggatg agcagcgcaa gggcggagac ctgcgcagcg ccgcgcgcgc cgccctgacg
      841 ctgcagacgc tggatgcgct cgaggcggag ctcaaggagc tgctgcgctc cctctcgccc
      901 gacgactcgc cgccgaaccg gaagtagcat gcgctttctc atcaccaacg acgacggcat
      961 tctcgcgcac ggcatcgagt gcctcatcga ggcggccgag ccgctcggcg aggtgttcgt
     1021 cgtggcgccc gaccgcgagc agagcgcgac gagccactcc ctgacgctgc accatccgct
     1081 gcgccccgtg cgccgctccg aacaccggtg gcaggtggac ggcacgccca cggactgcgt
     1141 gatgctcgcc gtcgaggccc tgctgcccga gcgccccgac ttcgtcctca gcgggatcaa
     1201 ccacggccag aacatgggcg aggacgtgct gtactcgggc acggtcgccg ccgcgatgga
     1261 ggggctcgcg ctgggcatcc cgtccatcgc tttctcgttc gccggcgggg atctccgcgc
     1321 ggacctcacg tacctgaagc agcaggtggc gatcctgacg cccctgctgg cgcacctgac
     1381 gtcgctgccg gcgtttccct cgcacaccct gctgaacgtc aaccttccgc cggtgccggc
     1441 cgacggcgtg cgaggcgcgc gcctgacacg gctgggcagc cgggtctatt ccggctcgct
     1501 caagccgatg cgcgatccgt gggatcgtga catcttctgg atcggcggtg gctccatcac
     1561 ctggagcggc gaggacaact cggacttccg cgccatccag gacggctacg tctccatcac
     1621 gccccttcac ctcgacctca cgaactacag catgctggat tcagcgggga cgtggtggcg
     1681 ggaaccgtag aaggcgccat gggcggcgcg cggcgtcgtc tcgtggagac gctgcgcgag
     1741 aaaggcatcc gcgacctggc cgtgctgcgc gcgttcgacc tcacgcgtcg gcacgagttc
     1801 gtgcccaccg gcgtgcggca tcgtgcgtac gaggacgcac cgctgccgat cggcagtgga
     1861 cagacgatct cgcaaccgtc cattcacgca cggtatctcg agctgctcgc gctcaagggc
     1921 agcgagcgcg tgctggagat cggcacgggc tcgggctacc agacggtcct cctgtcgcac
     1981 ctcgtcgcgc agatcttcac gatcgagcgc atcgccgcgc tctacacgat ggcgcgcgac
     2041 gccatcgcga gggccggagc gaagaacgtg tcgatgctcc tgggcgacgg gaccgtgggc
     2101 tggcgcgagt acgcgccgta cgatgccatt ctcgtgagcg ccggcggtcc gtcggtgccg
     2161 cagcccctcg tggatcagtt ggccgacggc ggtcgcatgc tcgtgccggt gggcgcgatg
     2221 gaagagcaga cgctcaagct cgtcacgcgg cgcggcgccg cgatcgagac gcgcgacgtg
     2281 gcaccggtgc gcttcgttcc gctgctcggc acccacggtt gggagcagca gtaagtgcag
     2341 acgctgcacg tgcgaatcag cggcaaggtg cagggcgtgg gtttccggtg gttcgtgcgt
     2401 gaagaggctc ggcggctggg actgagtggt tgggtgacga acctgcccgg cggcgaggtc
     2461 gaggtccgcg ccggcgggga gcgcggctcg ctcgagcggc tccggcgagc gctgcaggtg
     2521 gggccgtcgg gcgcgcaggt ggagcgcgtc gacgacgtgg cgggcgatca cgccggcacg
     2581 ctgccgtacc cgttcaacat ccatcgctga cgtggccgct gccgatctct ccgcgcgcct
     2641 gacgcgcgcg ctccgcgacg tgcccgattt ccccaggccg gggatcgtct tcaaggacat
     2701 cactccggtg ctcgcggatg catcgctgtt cgccgagacg accgcggcca tggccgcggc
     2761 ggcgcgagcg ctcggagtca cgcacgtcgc ggggatcgag agccgcgggt tcatcttcgc
     2821 ggcgccgatc gcactcgcgc tcggcgccgg attcatcccg atccggaagc ccggcaagct
     2881 tccctggcgt tcggtgggcc gggagtatgc gctcgaatac ggcagcgatc gtctggagat
     2941 gcacgtggac gcgctgcccc ggggcgcgcg cgtcctgctg gtcgacgacg tgctggccac
     3001 gggaggtacc gccgccgccg cggccgcgct gatcgaggag gtggacggct cggtcgtcgc
     3061 gtgctcgttc ctgctcgcca tcggcgccct ccagggcgcc gaacgactgc gcgcgtggcc
     3121 ggtgcaggtg ctgctcgcgg tgtaggtcgc cccgaacgca gcacggcccc acgtgccggc
     3181 atcgacacat ggggccgtcc tgcctgccga acagcgcagg ctactgcacg gtcacggcgc
     3241 gcacgccggt gccgaggtcg gtgccgacgg ccacgtagcc gaccgccttg gggttgttcc
     3301 ggacgaaggc gagcacctcg gcgtcggagc ccttctcgac cggcggcgag tcaccgcccg
     3361 agaagatctg ctgctgccag tagctgatga tcgccgagag gggccggccg aggatcgcct
     3421 tgctgaaggt ggagcggacc ttggcttcct tgtcctggtc caccgggagg agctccttgt
     3481 tcttcttgag gaag
//
LOCUS       DASSYW010000524         3187 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1524843, whole genome shotgun sequence.
ACCESSION   DASSYW010000524 DASSYW010000000
VERSION     DASSYW010000524.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3187)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3187)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3187
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1524843"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..344)
                     /locus_tag="VFN38_08365"
     CDS             complement(<1..344)
                     /locus_tag="VFN38_08365"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HET9011815.1"
                     /translation="MPVRFSALVFASYLFVAAPLGAQQATVAAPVDTARADTAGAPRA
                     LERVRVTAARPHRYAARSTRSATRTDTPLRDIPQSATVLTREVLADQSVQSMADVVRY
                     MPGITMGLGEGHR"
     gene            complement(440..2407)
                     /gene="acs"
                     /locus_tag="VFN38_08370"
     CDS             complement(440..2407)
                     /gene="acs"
                     /locus_tag="VFN38_08370"
                     /EC_number="6.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003987 - acetate-CoA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0019427 - acetyl-CoA biosynthetic process
                     from acetate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase"
                     /protein_id="HET9011816.1"
                     /translation="MSDDLQVLLTEHRKFEPPAEFRADAALSSPAIYERGTANLERYW
                     GEEADKLEWMTRYSKVLDWKPPHAKWFVGGKLNVSVNCLDRHVRGPRRNKAALVFEGE
                     PGDRRTLTYWDLYIQVNQFANVLKSLGVKKGDRVAIYLPLIPEAAVAMLACARLGAIH
                     SVVFGGFSPESLRDRINDSECKVLVTADGGYRRGSVVPLKRNADKALEETPSIRHVVV
                     VQRRPGAAGDEAGAEMIEGRDHWWHRLMRAAPLWCEPEPMDAEDVLFILYTSGTTGKP
                     KGIVHTTAGYLVGAQTSTAQVFDLKEDDVFWCTADVGWVTGHTYLVYGPLANGATCAM
                     YEGAPDWPEKDRFWDICERFGVTILYTAPTAIRAFMKWGDHWPAKHDLSRLRLLGSVG
                     EPINPEAWMWYREHIGGNRCPIVDTWWQTETGSIVISPLPALTATKPGSATVPLPGYA
                     AAILDVRGKEITVGGGLLALTKPWPSMLRTIWGDAQRYVDTYFSKWPGHPELYFPGDG
                     AKRDEDGYFWILGRVDDVLNVAGHRIGTMEVESALVEHPAVAEAAVVGKTHELKGQAI
                     AAFVTLREGFRQSPALRDELRDFVGEKIGAIAKPDDVLFSADLPKTRSGKIMRRLLRD
                     IAEGRALGDTTTLADPNVVNSLKEMYEAQES"
     gene            2561..>3187
                     /locus_tag="VFN38_08375"
     CDS             2561..>3187
                     /locus_tag="VFN38_08375"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HET9011817.1"
                     /translation="MSVSAASAGMPIRATTSELTPAEVRRVIFASSLGTVFEWYDFYL
                     YGSLAAIISKQFFSGVNPTAGFIFALLAFAAGFAVRPFGAIFFGRLGDLVGRKYTFLV
                     TIMIMGLSTFIVGVLPNYASIGVAAPVILILLRLLQGLALGGEYGGAATYVAEHSPRG
                     KRGSYTSWIQTTATLGLFLSLLVILGCRILLGTPTFEAWGWRIPFLVSL"
BASE COUNT          455 a         1046 c         1134 g          552 t
ORIGIN      
        1 cggtgtcctt cgccgaggcc catcgtgatg ccgggcatgt agcggacgac gtcggccatg
       61 ctctggaccg actggtcggc gagcacttcg cgggtgagca cggtggccga ctgcgggatg
      121 tcgcgcagcg gcgtgtccgt acgggtggcc gagcgcgtgc tccgcgccgc gtagcggtgc
      181 gggcgggcgg cggtgacgcg tacgcgttcg agcgcgcgtg gggcgccggc ggtatcggcg
      241 cgggcggtat cgaccggggc ggcgacggtg gcctgctgcg cgccaagtgg tgcggcgaca
      301 aagagatagc tcgcgaacac gagcgcggaa aatcggacgg gcatggtggg gaacgcggag
      361 tgggtggtaa tcccgataac ttctatcggg attgatccat cctacccgca tcgcccacca
      421 tcgtcaagcg cgccgctgct cagctctcct gcgcctcgta catctccttc agcgagttca
      481 ccacgttggg atccgccagc gtcgtcgtgt cgcccagggc gcgtccctcg gcgatgtcgc
      541 gcagcaggcg ccgcatgatc ttgccggagc gcgtcttggg gaggtcggcg ctgaagagca
      601 cgtcgtccgg cttggcgatg gcgccgatct tctcccccac gaagtcgcgg agctcgtcgc
      661 ggagcgccgg cgactgccgg aatccttcac gcagggtgac gaaggcggcg atcgcctgcc
      721 ccttcagctc gtgcgtcttt cccacgaccg ccgcttcggc cacggcggga tgctcgacga
      781 gcgcgctctc gacctccatc gttccgatac gatgtcccgc gacgttcagc acgtcgtcca
      841 ctcggcccag gatccagaaa taaccgtcct cgtcgcgctt ggcgccgtcc ccggggaagt
      901 agagctcggg gtggccgggc cacttggaga aataggtgtc cacgtagcgc tgcgcgtcgc
      961 cccagatggt gcggagcatc gacggccagg gcttggtgag cgcgagcagc ccgccgccga
     1021 cggtgatctc cttgcctctc acgtcgagga tggcggcggc gtagccggga agcggcacgg
     1081 tcgcgctgcc gggcttcgtg gcggtgagcg ccggcagcgg cgagatgacg atcgagcccg
     1141 tctccgtctg ccaccaggtg tcgacgatcg ggcagcggtt gcccccgatg tgctcgcgat
     1201 accacatcca cgcttccggg ttgatcggct cgccgaccga gccgagcaga cgcaggcgcg
     1261 acaggtcgtg cttcgccggc cagtgatcgc cccacttcat gaaggcgcgg atggcggtgg
     1321 gcgcggtgta gaggatcgtc acgccgaagc gctcgcagat gtcccagaag cggtccttct
     1381 ccggccagtc gggcgcccct tcgtacatgg cgcacgtcgc gccgttcgcg agcgggccgt
     1441 acaccaggta ggtgtgcccg gtgacccacc cgacgtcggc ggtgcaccag aagacgtcgt
     1501 cctccttgag gtcgaacacc tgcgccgtgg aggtctgcgc gccgacgaga tagccggccg
     1561 tggtgtggac gattcccttc ggcttgccgg tcgtgcccga ggtgtagagg atgaagagca
     1621 cgtcttcggc gtccatcggc tcgggctcgc accagagcgg cgcggcgcgc atgaggcggt
     1681 gccaccagtg gtcgcgcccc tcgatcatct cggcgccggc ttcgtcgccc gccgcgccgg
     1741 ggcggcgctg caccacgacg acgtgcctga tggacggggt ttcctcgagc gccttgtcgg
     1801 cgttgcgctt gagcggcacg accgagccgc ggcgatagcc gccgtcggcg gtgacgagga
     1861 ccttgcactc cgagtcgttg atgcggtcgc gcagcgactc gggagagaac ccgccgaaca
     1921 ccacggagtg gatggcgccg agtcgggcgc aggcgagcat ggccacggcc gcctcgggga
     1981 tgagcggcag gtagatcgcc acgcgatctc ccttcttcac gccgagggac ttgaggacgt
     2041 tggcgaactg gttgacctgg atgtagaggt cccagtaggt gagcgtgcgg cgatcgcccg
     2101 gctcgccctc gaacacgagc gccgccttgt tgcgccgggg gccccgcacg tgccgatcga
     2161 ggcagttgac ggagacgttg agcttgccgc cgacgaacca cttcgcgtgc ggcggtttcc
     2221 agtccagcac cttggaatag cgcgtcatcc actcgagctt gtcggcctcc tccccccagt
     2281 agcgctccag gttcgcggtc ccgcgctcgt agatcgccgg cgaggagagg gccgcgtcgg
     2341 cgcggaactc ggccgggggc tcgaacttcc gatgttccgt gaggaggacc tggagatcgt
     2401 cggacatgat ctgcgctcgg ggatgaggaa cgatgacgac tgattctcgc agcgggtcgg
     2461 cgtggaagca acctccatga gccggccagc ggcgtcgctg attgacgaat cggcgccagc
     2521 gcgtacgcta tggccaatct tgcgaccttc gggaggggtg atgtccgtca gcgcagccag
     2581 tgccgggatg ccgattcgtg cgaccaccag cgagctgaca ccggccgagg tgcgacgcgt
     2641 gatcttcgcg tcgtcgctcg gcacggtgtt cgagtggtac gacttctacc tgtacggatc
     2701 gctggcggcg atcatcagca agcagttctt ctcgggcgtg aacccgacgg ccggcttcat
     2761 cttcgccctg ctggcgttcg cggccggatt cgccgtgcga ccgttcgggg cgatcttctt
     2821 cggccggctg ggtgatctcg tgggcaggaa gtacaccttc ctcgtcacga tcatgatcat
     2881 gggcctgtcg acgttcatcg tcggcgtcct gcccaactac gcctcgatcg gcgtggcggc
     2941 gccggtgatc ctcatcctgc ttcgcctcct tcagggactc gcgctggggg gcgagtacgg
     3001 cggcgcggcg acctacgtgg ccgagcactc gccgcggggg aagcgcggct cgtacacgtc
     3061 gtggatccag acgacggcga cgctcgggct cttcctgtcg ctgctcgtga tcctcggctg
     3121 ccgcatcctg ctcggcacgc cgacgttcga ggcgtgggga tggcgcatcc cgttcctcgt
     3181 gtcgctc
//
LOCUS       DASSYW010000525         2406 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1794775, whole genome shotgun sequence.
ACCESSION   DASSYW010000525 DASSYW010000000
VERSION     DASSYW010000525.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2406)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2406)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2406
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1794775"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..618
                     /locus_tag="VFN38_08380"
     CDS             <1..618
                     /locus_tag="VFN38_08380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HET9011818.1"
                     /translation="GIARVVAAFRDAAQRALAAGFQVIELHGAHGYLLHEFLSPLSNQ
                     RSDEYGGSFENRTRLFVEVTEAVRSVWPESLPLLARFSATDWVPGGWDVEQSIALARV
                     LAPLGVDLVDCSSGGIMPGVTIPIGPGYQVELAARIRREAPIPTAAVGLITGAAQADE
                     IVRSGKADMVFLARQLLRDPYWPLHSAKALGASVTWPVQYQRAVD"
     gene            764..1198
                     /locus_tag="VFN38_08385"
     CDS             764..1198
                     /locus_tag="VFN38_08385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011819.1"
                     /translation="MINHVRFAVVAAALSVAALSTNARAQDAHKPGGLNKVAHDVSNT
                     VKKAGRDTKAEVKRDASKTHNALTDAGNDTKAQLKRTTGIKGSQSHQPGGLNKVARNI
                     SKTSKKAASDAKAEKNRAKSEVHGELTETGKSVKDTTLKAKP"
     gene            1512..2132
                     /locus_tag="VFN38_08390"
     CDS             1512..2132
                     /locus_tag="VFN38_08390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011820.1"
                     /translation="MSTRFRRAGLLAAALLIGVSSACNTERASAPATVAAPASAPSRD
                     LVGGLLGTVTNTLKLTKATGLLRTTPLPAPITVTRTIGYWGGTLAIPEAGVTVVVPVG
                     ALSKDTQISMTARAGSLVAYDFEPHGVTFAKPLAFTQSLRGTNVSLLTVLQLKLGYYS
                     DPGLLGQTTAIVSELVSGVGSLLTWTFTAPIRHFSGYIVLTGFADE"
     gene            2165..>2406
                     /locus_tag="VFN38_08395"
     CDS             2165..>2406
                     /locus_tag="VFN38_08395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011821.1"
                     /translation="MNARQWARTGSTPFVPSVRHLGAGGLPAAIERGQALEHHGQRDD
                     ARRTYEQALRDGSASSSAEAAQLLRLVARTYLHDAD"
BASE COUNT          403 a          836 c          806 g          361 t
ORIGIN      
        1 ggaatcgcgc gcgtcgtcgc ggcctttcgc gatgcggcac agcgcgcgct cgccgcggga
       61 ttccaggtga tcgagctgca cggtgcccac ggctacctgc tgcacgagtt tctctccccg
      121 ttgagcaacc agcggtccga cgagtatggc ggcagcttcg agaatcgcac tcgcctcttc
      181 gtggaagtca cggaggcggt gcgcagcgtg tggccggaat cgctcccgct gctcgcgcgc
      241 ttctccgcga ccgattgggt gcccggcggc tgggacgtgg agcagtccat cgccctggcg
      301 cgcgtgctcg cgccgctcgg cgtggatctc gtcgactgct cgtcgggtgg gatcatgcct
      361 ggggtgacga ttcccatcgg acccggctac caggtggagc tcgcggcgcg catccgtcgg
      421 gaggcgccca ttccgacggc ggcggtgggg ctcatcaccg gcgccgcgca ggccgatgag
      481 atcgtgcgct ccgggaaggc cgacatggtg tttctcgcgc gccagctgct ccgcgatccg
      541 tattggccgc tgcactccgc caaggcgctc ggcgcgagcg tgacgtggcc cgtgcagtat
      601 cagcgtgcgg tggactgacg taacgatgcc cgaaggcgcg gaggctcgat gaacctcggg
      661 ccatcacgcc atcgcgccgt catgtccgcg tgtcatcgcg ccgtcaggca accgggccgc
      721 ggttttgcat tatcgggagg cattcacctc tcggaggacc tcgatgatca atcacgttcg
      781 ttttgcggtc gtcgcggcgg ccctgtcggt cgctgcgctc tcgacgaatg cccgcgcgca
      841 ggatgcgcac aagcccggcg gcctcaacaa ggtggcgcac gacgtcagca acacggtcaa
      901 gaaggcgggg cgcgacacca aggccgaagt gaagcgcgat gcgagcaaga cgcacaacgc
      961 gctcaccgac gcgggcaacg acacaaaggc gcagctcaag cggaccaccg gcatcaaggg
     1021 ctcgcagagc catcagccgg gcggcctcaa caaggtcgcg cgcaacatca gcaagacgtc
     1081 caagaaggcc gcgagcgacg cgaaggcgga gaagaacagg gccaagagcg aagtccacgg
     1141 cgagctcacg gagaccggca agagcgtcaa ggacacgaca ctcaaggcaa agccgtagca
     1201 ccaggatttg acacgagcgg gcggcacggc ggtgagcgtg ccgccgctcg tgcatcatca
     1261 tcgcgacagc tattaccagc gccgccctga ttcgcgcatt atgcatgagt tcgctgcaga
     1321 ctgcgatgca cacgacctga gcggctcgac cgcgagacag gcgatttgac cgcacttcgg
     1381 tcgacactct gacgtgaacc gcgcagcacc gagttgccgc cgggcagagt gacgagattc
     1441 ccgaaagtgt gagccatggc accgaggctg ccttgaggga gtcgtctccc tccccctcgg
     1501 agctcgtccc catgtcgacc cgtttccgcc gcgccggcct tctggccgca gcgctgctca
     1561 tcggcgtctc gtctgcctgc aacaccgagc gtgcatccgc gcccgcgacc gtcgccgcgc
     1621 ccgcttctgc cccgtcgcgc gacctggtcg gcggactgct cgggaccgtc accaacacgc
     1681 tcaagctcac caaggccacc ggtctgctgc gcacgacgcc gctgccggcc ccgatcacgg
     1741 tgacccggac gatcggctac tggggaggca cgctggccat tcccgaagcc ggcgtcacgg
     1801 tcgtcgtgcc ggtgggtgcg ctctcgaagg acacccagat ctcgatgacg gcgcgtgccg
     1861 ggtcgctggt cgcctacgac ttcgagccgc acggcgtgac cttcgccaag ccgctcgcct
     1921 tcacgcaatc gctgcgcggc acgaacgtct cgctgctgac cgtgctgcag ctcaagctcg
     1981 gctactactc cgatccgggc ctgctcgggc agacgacggc gatcgtctcc gagctcgtga
     2041 gcggcgtcgg cagcctgctg acctggacct tcacggcgcc gatcaggcat ttctccggct
     2101 acatcgtgct caccggattc gcggacgaat agggagagcg gacgcgagcg aacgggaggc
     2161 acgggtgaac gcgcgccagt gggcacgaac gggctccacg ccgttcgtgc cctcggtgcg
     2221 tcatctcggc gccggcggcc tgccggcggc gatcgagcgc ggtcaggcgc tcgagcacca
     2281 cgggcagcgc gacgacgcac gacgcaccta tgaacaggcg ctgcgcgacg gcagcgcgtc
     2341 gtcgtccgcc gaggcggcgc agctgctcag gctcgtcgca cgcacctacc tgcacgacgc
     2401 cgacta
//
LOCUS       DASSYW010000526         2414 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_751334, whole genome shotgun sequence.
ACCESSION   DASSYW010000526 DASSYW010000000
VERSION     DASSYW010000526.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2414)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2414)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2414
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_751334"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2123)
                     /locus_tag="VFN38_08400"
     CDS             complement(<1..2123)
                     /locus_tag="VFN38_08400"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HET9011822.1"
                     /translation="MESLVGSTISHYKILRKIGSGGMGVVYEAEDSRLGRRVAVKLLP
                     EATANDAGTLERFQREARAASALNHPGICTVHAIEQHERQHFIVMELLEGQTLAQRLG
                     KHAFEMGELLSLGIQIADALESAHSKGIVHRDLKPANLMVNARGQVKVLDFGLAKMGH
                     VPTAADPDEAHSQAETMMGAGHLTLAGTVMGTVYYMSPEQARGQLTDARTDLFSLGAV
                     LYQMATGALPFPGDTQPVVYEAILNRQPRPVEEINPSLPNALGAILEKALEKDRNLRY
                     QTATELKTDLLRLKRTIESGRQKVAELADSKSGAGKTAEKSIAVLYFENLSGVKEDEY
                     FRDGITEDIITELSKIRGMNVFSRPTVLVYRDRPATPSQIGQQLGAAYVLAGSLRRAG
                     NRLRITTQLVDTHTDFPLWSERYDREMKDVFEVQDEIAQKIAAALRIQLSPQEQEAIA
                     AKPTDNLQAYDLYLRGRSYARRLTRQDLEFALQMYENATTQDPNFALAYAAIANVCAY
                     YHAHYAREDVWIDRARAAAERAMELQPDVPEVMVAQAWILYAKSQYDEMTAIVRNVIA
                     HKRDCEGAYYLLLRGLYSSGRYQEVANVADEAIESSGTDYNVYVPIMNSLGALGKEEA
                     KRNIRHRSIQALEAHLRQVPEDARARVLCGGFYAAEGRNDDAVRETNLAMLLRPNEAM
                     IHYNAACTFCSMNKKAEALDALNKA"
BASE COUNT          359 a          750 c          862 g          443 t
ORIGIN      
        1 cacgccttgt tgagggcgtc gagtgcttcg gccttcttgt tcatcgagca gaaggtgcag
       61 gcggcgttgt aatggatcat cgcctcgttg ggccgcagaa gcatggcgag gttcgtttcg
      121 cgcacggcgt cgtcgttgcg cccctcggcg gcgtagaagc cgccacacag gacgcgggcg
      181 cgcgcgtcct ccggaacctg gcgcaagtgc gcctcgaggg cttgaatgga gcgatggcga
      241 atgttgcgct tcgcctcctc cttgccgagg gcgccgagcg agttcatgat cggaacgtac
      301 acgttgtagt ccgtgccgct cgattcgatc gcctcgtcgg cgacgttggc gacttcctgg
      361 tagcgtcccg atgagtagag gccgcggagc aacaaatagt aggcgccctc gcaatcgcgc
      421 ttgtgggcga tgacgttgcg cacgatggcg gtcatctcgt cgtactgcga cttggcatac
      481 aggatccagg cctgggcgac catgacctcc ggcacgtcgg gctgcagctc catggcccgc
      541 tcggcagcgg cgcgggcgcg atcgatccac acgtcctcgc gggcgtagtg cgcatggtag
      601 taggcgcaga cgttggcgat ggcggcgtag gcgagcgcga agttcgggtc ctgcgtcgtg
      661 gcgttctcgt acatctggag cgcgaactcg agatcctggc gcgtcaggcg ccgggcgtag
      721 ctgcggccgc ggagatagag atcgtaggcc tgcaggttgt cggtcggttt ggcggcgatg
      781 gcttcctgct cctgcggtga cagctggatg cgcagcgccg cagcgatctt ctgggcgatc
      841 tcgtcctgga cctcgaagac gtccttcatc tcgcggtcgt agcgctccga ccacagcggg
      901 aagtcggtgt gcgtgtcgac gagctgcgtc gtgatgcgga gccggttgcc ggcacggcgc
      961 aggctgccgg ccagcacgta ggcggcgccg agctgctggc cgatctgcga cggcgtcgcc
     1021 ggcctgtcgc ggtacacgag cacggtcggg cgcgagaaga cgttcatgcc gcggatcttc
     1081 gacagctccg tgatgatgtc ctcggtgatg ccgtcgcgga agtactcgtc ctccttgacg
     1141 ccgctcaaat tctcgaaata gaggacggcg atcgacttct cggcggtctt gcccgcgccg
     1201 ctcttcgagt ccgcgagctc ggccactttc tggcgcccgg actcgatggt gcgcttcaag
     1261 cgtaagaggt cggtcttgag ctcggtggcc gtttgataac gcaggttgcg gtccttctcc
     1321 agcgccttct cgagaatggc gccgagggcg ttcggcagcg acgggttgat ctcctcgacc
     1381 ggccgcggct ggcggttcag gatcgcttcg tagaccaccg gctgtgtgtc gcccgggaac
     1441 ggcagcgccc cggtcgccat ctggtagagc acggcgccga gcgagaagag gtccgtgcgc
     1501 gcgtcggtca gctggccgcg cgcctgctcc ggcgacatgt agtagaccgt tcccatgacc
     1561 gtgccggcga gcgtcaggtg ccccgctccc atcatcgtct ccgcttgcga atgggcctcg
     1621 tcggggtcgg cggccgtggg tacgtggccc atcttggcga gaccgaagtc gaggaccttg
     1681 acctggccgc gggcgttgac catgaggttc gccggcttga gatcccggtg cacgatgccc
     1741 ttcgagtgcg ccgactcgag ggcgtcggcg atctggatgc cgagcgagag cagctcaccc
     1801 atctcgaacg cgtgcttgcc aagacgctgg gccagcgttt ggccttcgag gagctccatg
     1861 acgatgaaat gctggcgctc gtgctgctcg atggcgtgca ccgtgcagat tccggggtgg
     1921 ttgagcgccg aggccgcgcg cgcctcgcgc tggaagcgct cgagcgtgcc ggcatcgttc
     1981 gcggtcgcct cggggagcag cttcaccgcg acgcgtcggc cgagacggct gtcctccgcc
     2041 tcgtagacga cgcccatccc accggaaccg atcttgcgca ggatcttgta gtgcgagatc
     2101 gtgctgccga ccagagactc catcgaagcg acatcctcct gttggccgct tgggcggcac
     2161 cggcgcgtgc attgccgaga ccgcggagcg gaagcggatg ttgcacggga gacggcagcg
     2221 cgcgctgaaa cgcgttcgag tctagcacac tctggagggg gcgaatcacg cggccagggc
     2281 gagacagaga tcgccgaact cgtgaccgcg atagccggcg gcttcggcat gccggtgtgc
     2341 ggcttcgagg agctcgccgg gcgcgaacgc ccgcagcagc gagaaatgac tggagtcggg
     2401 ctcgtggatg ccgg
//
LOCUS       DASSYW010000527         2293 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_793398, whole genome shotgun sequence.
ACCESSION   DASSYW010000527 DASSYW010000000
VERSION     DASSYW010000527.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2293)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2293)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2293
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_793398"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1413
                     /gene="hutH"
                     /locus_tag="VFN38_08405"
     CDS             <1..1413
                     /gene="hutH"
                     /locus_tag="VFN38_08405"
                     /EC_number="4.3.1.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR01225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004397 - histidine ammonia-lyase activity
                     [Evidence IEA];
                     GO_process: GO:0006548 - histidine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine ammonia-lyase"
                     /protein_id="HET9011823.1"
                     /translation="RANEVVSALVASNAVAYGVTTGFGKLSDVAIPRDRLDELQVNLI
                     RSHAAGVGALLPEREARAMMLLRANVIAKGYSGARPVLVDLLLGMLGAGLYPPIPEQG
                     SVGASGDLAPLAHLALALIGEGELFGGGERAAASALLARAGLAPVRLGPKEGITLING
                     TQAHTAIAALGVVDAHRLWQVAHLAGAMTLEALLGTPVAFDSRIQDARGQLGQAASAA
                     LLRSLLRDSEIRESHRDNDPRVQDSYALRCMPQVHGPVLDAIDFCAGVIGRELNAATD
                     NPLVFAETGELLSGGNFHGQAVAMALDFLAIAMTNLATMSERRIDRLVHPDLNQGLPP
                     FLSKDAGVNSGFMMAQVTAASLASECKVLSHPASVDTIPTDGNKEDVVPMAMGAAWKL
                     RRIVQNVRHVLAIELMCAAQGLDYRKPLRAGRGAEQGRALVRRLVAPLEQDRVLSSDI
                     AALAAAIEHGHFTTGIGGSA"
     gene            1410..>2293
                     /gene="hutU"
                     /locus_tag="VFN38_08410"
     CDS             1410..>2293
                     /gene="hutU"
                     /locus_tag="VFN38_08410"
                     /EC_number="4.2.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016153 - urocanate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006548 - histidine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urocanate hydratase"
                     /protein_id="HET9011824.1"
                     /translation="MTAVAPPATGARPVRAPRGAVISCKGWQQEAALRMLMNNLDPDV
                     AERPDELVVYGGTGRAARSWEAFDAIVASLRALEDDETLLVQSGKPVAVFRTHRGAPR
                     VLIANSNLVGRWATWEHFRELERRGLMMYGQMTAGSWIYIGSQGIVQGTYETFGAVAR
                     THFGGSLAGRLVVTAGLGGMGGAQPLAATMQGAVMLAFDVDESRIDKRLATGYCDAKA
                     RSLDEGLAMAEAARREGRAFSVGVVMNAAPALEELVRRGVAVDVLTDQTSAHDMLRGY
                     LPDGMSLDAAAALRESDPA"
BASE COUNT          304 a          830 c          852 g          307 t
ORIGIN      
        1 cgcgccaacg aggtcgtcag cgcgctcgtc gccagcaacg cggtcgccta cggcgtcacc
       61 accggcttcg ggaagctgtc cgacgtcgcc atcccgcgcg accgcctcga cgagctccaa
      121 gtgaacctga tccgaagcca cgccgccggg gtgggcgcgc tgctgccgga gcgcgaggcg
      181 cgcgcgatga tgctgctgcg cgccaacgtg atcgccaagg gctactccgg cgctcgtccc
      241 gtgctcgtcg atctcctgct gggcatgctc ggcgccggcc tctatccgcc cattccggag
      301 caggggagcg ttggcgcgag cggcgacctc gcgcccctcg cgcacctcgc gctcgccctc
      361 atcggcgagg gcgagctgtt cggcggaggc gagcgcgcgg ccgcctcggc gctgctcgcc
      421 cgcgccggcc tggcccccgt gcggctcggc cccaaggagg gaatcaccct catcaacggc
      481 acccaggcgc ataccgccat cgccgcgctc ggcgtcgtgg acgcgcaccg gctctggcag
      541 gtggcacacc tcgcgggcgc catgaccctg gaggcgctgc tcggcacccc ggtcgccttc
      601 gattcccgca tccaggacgc gcgcggccag ctcggccagg ccgcgagcgc ggcgctcctg
      661 cggtcgctgc tccgcgacag cgagatccgc gagtcgcacc gcgacaacga tccccgcgtc
      721 caggactcgt acgcgctgcg ctgcatgccg caggtgcacg gcccggtgct cgacgccatc
      781 gacttctgcg ccggcgtgat cggccgcgag ctcaacgcgg ccaccgacaa cccgctcgtc
      841 ttcgccgaga cgggggagct cctgagcggc ggcaacttcc acgggcaggc ggtggcgatg
      901 gcgctcgatt tcctcgccat cgcgatgacc aacctcgcca cgatgtcgga gcggcgcatc
      961 gaccggctgg tgcaccccga cctgaaccag ggtctccccc ccttcctctc gaaggatgcg
     1021 ggggtgaact cgggattcat gatggcgcag gtgacggcgg cgtcgctggc gagcgagtgc
     1081 aaggtgctct cgcacccggc cagcgtggac acgatcccga cggacggcaa caaggaggac
     1141 gtcgtgccga tggcgatggg ggcggcgtgg aagctgcgcc gcatcgtgca gaacgtgcgg
     1201 cacgtgctgg cgatcgagct gatgtgcgcg gcgcaggggc tcgactaccg caagccgctc
     1261 cgtgccggcc gcggcgcgga gcaggggcgc gccctggtgc gccgcctcgt ggcgccgctc
     1321 gagcaggacc gcgtgctctc gtcggacatc gcggcgctcg ccgcggcgat cgagcacggc
     1381 cacttcacca ccggcatcgg aggttcggca tgaccgccgt cgctcccccc gccaccggtg
     1441 cgcgcccggt gcgggcgcca cgcggcgcgg tgatctcgtg caaggggtgg cagcaggagg
     1501 ccgcgctgcg gatgctgatg aacaacctcg atcccgacgt cgccgagcgc cccgacgagc
     1561 tggtggtgta cggcggcacg ggacgggccg cgcggagctg ggaggcgttc gacgccatcg
     1621 tcgcgtcgct gcgcgcgctg gaggacgacg agacgctgct cgtccagagc ggcaagccgg
     1681 tcgccgtctt ccggacccat cgcggcgcgc cgcgcgtgct gatcgcgaac tccaacctcg
     1741 tgggccgctg ggcgacgtgg gagcacttcc gcgagctgga gcggcgcggc ctcatgatgt
     1801 acggccagat gacggccggc tcgtggatct acatcggctc gcaggggatc gtgcagggca
     1861 cctacgagac cttcggcgcg gtggcgcgca cccatttcgg cggctcgctg gccggccggc
     1921 tcgtcgtcac cgcggggctc ggcgggatgg ggggggcgca gccgctggcg gccaccatgc
     1981 agggagccgt catgctggcc ttcgacgtgg acgagtcgcg catcgacaag cggctggcca
     2041 cgggctactg cgacgcgaag gcgcggtcgc tcgacgaggg cctggcgatg gccgaggcgg
     2101 cgcggcgcga ggggcgggcg ttctcggtgg gggtggtgat gaacgccgcg cccgcgctgg
     2161 aggagctcgt gcgccgcggc gtcgcggtgg acgtgctcac cgaccagacc agtgcgcacg
     2221 acatgctgcg cggctacctc cccgacggca tgtcgctcga cgccgcggcg gcgcttcggg
     2281 agagcgaccc ggc
//
LOCUS       DASSYW010000528         2266 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1299342, whole genome shotgun sequence.
ACCESSION   DASSYW010000528 DASSYW010000000
VERSION     DASSYW010000528.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2266)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2266)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2266
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1299342"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..860)
                     /locus_tag="VFN38_08415"
     CDS             complement(<1..860)
                     /locus_tag="VFN38_08415"
                     /inference="COORDINATES: protein motif:HMM:NF013106.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase domain-containing protein"
                     /protein_id="HET9011825.1"
                     /translation="MSLRFPALVAVVVLATAPASPAQSTGEPWQIVPQPQTSLVFARD
                     GSLIGEIGRESRTSVAIRTLPKYVGQAFVAVEDHRFYQHDGVDLIGVAGAIKGKLLEG
                     ITGDNRGGASTITQQLVGNMHPDQIDRRDMGLGRKLREQAAAREMEKHYSKEQILEAY
                     INQINFGHGWYGIESAARHYFAKPAARLTLAEAATLAALPKSPVGYDPSRFPEKARVR
                     RNLILALMAQQGYVTTADAERAKAEPVVTDRGRGMAAPAEYFVDAVRQSLERGGVNLA
                     AGGYRIYTTA"
     gene            997..>2266
                     /locus_tag="VFN38_08420"
     CDS             997..>2266
                     /locus_tag="VFN38_08420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrilase-related carbon-nitrogen hydrolase"
                     /protein_id="HET9011826.1"
                     /translation="MAPFLTLALAQFQPKKGSYRDNLTRIAALIAQAATLEQRPRLIC
                     FPETALSGYFLEGGVREHAVTAGQLAADLHRLYQGPPIDVCVGFYEVWRNKLYNSAIY
                     LSLGEAVPLVRHVHRKVFLPTYGMFDEARFVEPGHEIRAFDTPWGRAAILVCEDVWHS
                     LSGNIAALDGAQLIIVPTAPPARGAWPREDGVPGPASVARWERLARDMADEHGLYVAL
                     AHLVGGEGGKQFPGSAMIAGPKGDLRVRGPLWEEALVVATLDLADVTRARADMPLIAD
                     LETMAPHLREALAKVDAATPHLLAFDGMEQLAAVMGDRGDTPGGRAAAKARSTTRMAA
                     STSVPVLAADPHVGPAPLEIDTEMVERWLVQFLRDEMGRRGFQKAVLGISGGVDSAVS
                     AALAVRALGAANVIGVRMPYRTSSTESLEHG"
BASE COUNT          327 a          786 c          814 g          339 t
ORIGIN      
        1 tccgcggtcg tgtagatccg gtagccgccc gcggcgaggt tcacgccgcc gcgctcgagc
       61 gactgtcgca ccgcgtcgac gaagtactcc gccggggccg ccatcccgcg tccgcggtcg
      121 gtgacgaccg gctcggcctt cgcccgctcg gcgtcggcgg tggtgacgta tccctgctgc
      181 gccatgagcg cgaggatcag gttgcgccgg acccgtgcct tctcgggaaa gcgcgacggg
      241 tcatacccca ccggcgactt ggggagcgcc gccagcgtgg ccgcctcggc cagcgtcagc
      301 cgcgccgccg gcttggcgaa gtagtggcgc gccgccgact cgatgccgta ccagccgtgg
      361 ccgaagttga tctggttgat gtacgcctcg aggatctgct ccttcgagta gtgcttctcc
      421 atctcgcgcg ccgccgcctg ttcgcgcagc ttgcggccga gacccatgtc gcgccggtcg
      481 atctggtcgg gatgcatgtt cccgacgagc tgctgcgtga tcgtgctcgc accgccccga
      541 ttgtcgccgg tgatcccctc gaggagcttg cccttgatgg cgcccgcgac gccgatgaga
      601 tccacgccgt cgtgctgata gaagcggtgg tcctccacgg cgacgaacgc ctgccccacg
      661 tacttgggca acgtgcggat ggcgaccgac gtgcgcgatt cgcgtccgat ctcgccgatg
      721 agcgagccgt cacgggcgaa gacgagcgac gtctggggct gtggcacgat ctgccagggc
      781 tcgccggtgg actgggcagg ggaggcgggc gccgtggcga ggacgacgac ggcgacgagg
      841 gctgggaatc gcaatgacat ggaacggaga tacacctgag gtccgaagcc ggttcgtgga
      901 agacgggaat cgtatcgttg acgatcggga gccgaccggg ggtaccgcaa agccggcgtt
      961 gccacgaacc catccacggc gcgaccttta ggcaccatgg cccccttcct cacgctcgcc
     1021 ctcgcgcagt tccagccgaa gaagggaagc tatcgggaca acctgacccg gatcgccgcc
     1081 ctgatcgccc aggcggcgac gctcgagcag cgaccgcggc tgatctgctt cccggaaacc
     1141 gcgctcagcg gctacttcct ggagggcgga gtgcgcgagc acgcggtgac cgccggccag
     1201 ctcgcggccg acctgcaccg gctctaccaa ggaccgccga tcgacgtctg cgtcgggttc
     1261 tacgaggtct ggcgcaacaa gctgtacaac agcgcgattt acctctcgct cggcgaggcg
     1321 gtgcccctgg tgcgccacgt ccaccggaag gtgttcctcc ccacctacgg catgttcgac
     1381 gaagcgcgtt tcgtggagcc ggggcatgag atccgcgcgt tcgacacgcc gtgggggcgc
     1441 gcggcgatcc tcgtctgcga agacgtatgg cactcgctct cgggtaacat cgcggcgctc
     1501 gacggcgcgc agctcatcat cgtgcccacc gcgccgccgg cgcgcggcgc ctggccgcga
     1561 gaggacggcg tgcccgggcc ggcgagcgtg gcgcgttggg agcgcctggc gcgcgacatg
     1621 gccgacgagc acggtctcta cgtcgcgctc gcgcacctgg tcggcggcga ggggggcaag
     1681 cagttccccg gcagcgcgat gatcgccggc ccgaagggcg acctgcgcgt ccggggcccg
     1741 ctgtgggagg aggcgctcgt cgtggcgacg ctcgacctcg ccgacgtgac ccgggcccgc
     1801 gccgacatgc cgctcatcgc cgacctcgag acgatggcac ctcacctgcg cgaggcgctg
     1861 gcgaaggtgg atgccgcaac accccacctg ctcgcgttcg acggcatgga gcagctggcg
     1921 gcggtgatgg gtgaccgcgg cgacacgccg ggtggccgcg ccgcggcgaa agctcgctcg
     1981 acgacgcgga tggcggcgtc cacatcggta ccggtgctcg cggctgatcc gcacgtgggc
     2041 cccgcgccgc tcgagatcga caccgagatg gtggaacgct ggctcgtgca gttcctgcgc
     2101 gacgagatgg gtcgtcgcgg cttccagaag gcggtgctcg gcatctccgg cggcgtggat
     2161 tccgccgtga gcgccgcgct cgccgtgcgc gcgctcggcg ccgcgaacgt gatcggcgtc
     2221 cgcatgccct accggacgtc gagcacggag agcctggagc acggtc
//
LOCUS       DASSYW010000529         5100 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1823888, whole genome shotgun sequence.
ACCESSION   DASSYW010000529 DASSYW010000000
VERSION     DASSYW010000529.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 5100)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5100)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5100
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1823888"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1603)
                     /locus_tag="VFN38_08425"
     CDS             complement(<1..1603)
                     /locus_tag="VFN38_08425"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HET9011827.1"
                     /translation="MSVITDFRYALRSLTRVKGLTITVVLTLALGIGANAAIFSVVRG
                     VLLRPLVNRDEDRLIYIRQSAPGMGTENVNFSVPEIRDLRASIRSLTAFGDFSTIEFT
                     MVGLGEPRVVRAGVVGGSYFDVMGLRPARGRLLGPSDDGPKADGAAVLTYRFWTTGLQ
                     SDPNVLGKVVRLGDRTATIVGILEPSIPYPAETEIIANVVTSPHHLDATMVDGRVHRM
                     TELFGRLAPGADLDGARAELRTAHASMVKSHPESYPASADFRIDATRLRDQIISPART
                     VLLVLLAASALVFVIACSNVANLILARSVRREGELAIRAALGASAGALRRTLLAESLL
                     LCGAGAILGVVIARPMVAVLAQYAARFSVRALDVTVDSSLLWVGAALSIAAAVLLAYV
                     PRLPSADSANGVAIANGSVRITAGTNRRLRAFAVVQIAASFVLLAGAGMLLMSLVALQ
                     RANTGMNMRNVLALNVPIVSYSRPPAQIAQFYREALRRIGEIPGVERVAVGTIVPWRD
                     AGTFGPGFQFSVAGYAKANGEEDPRG"
     gene            complement(1731..2222)
                     /locus_tag="VFN38_08430"
     CDS             complement(1731..2222)
                     /locus_tag="VFN38_08430"
                     /inference="COORDINATES: protein motif:HMM:NF019928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HET9011828.1"
                     /translation="MMTNAATLKITTPGDRELAMTRTFDAPARMVFKAFTTPELLTQW
                     LGVFGGWSLVRCEMDVRAGGTYRWEWSKPGVKVMGVSGVYREVVAPVRLVATEQFDDA
                     WYKGEALCTIEFIEEGGRTTVVQTMTYISKDVRDGVLQSGMETGITASYDKLAELLKV
                     VGS"
     gene            complement(2219..2611)
                     /locus_tag="VFN38_08435"
     CDS             complement(2219..2611)
                     /locus_tag="VFN38_08435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HET9011829.1"
                     /translation="MNSAESRLDATFAALADPTRRAILARLATGAASVTELSAPFAMS
                     QPAISKHLKVLERAGLIARGRDAQRRPRRLDAAPLAEATEWLEHYRRFWEQSFDRLDA
                     VLEQMKAAERRASPQRTRTQPRRSRSTR"
     gene            complement(2837..3358)
                     /locus_tag="VFN38_08440"
     CDS             complement(2837..3358)
                     /locus_tag="VFN38_08440"
                     /inference="COORDINATES: protein motif:HMM:NF017015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HET9011830.1"
                     /translation="MNMTTEQAVWLRDLYLKPLEIESATTARVLAAVPVAAGDYRPDP
                     ASRTAMDLLRHIAAADVRFVDTVIAGEFSLQNLIPATARTPAEIAEWYSASHAAARTA
                     LAAVDGDALVKPVNFRGMFTRPAVTYLQMGLHYTIHHRGQLSAYLRAMGAKVPSIYGE
                     SYDAAQARLAAGK"
     gene            3448..>5100
                     /locus_tag="VFN38_08445"
     CDS             3448..>5100
                     /locus_tag="VFN38_08445"
                     /inference="COORDINATES: protein motif:HMM:TIGR03436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HET9011831.1"
                     /translation="MSRRLTLFTAALLAYAATLAAQTSGQATPQRPDPDAPAPFRVSV
                     DVVAVDVQVIDRDGRPVPDLGPEKFSVTINGRRRRVVSAERIGSDMGEDGRSAAPRAI
                     ASVPARVIMIAVDCISFDATESRDVIQAVRQFVRQLSPDDMVGLSAYPNGPKVDPTRD
                     HDIVVRALDQVVGQRDLAEISQFHLRPSEIVDIMNELYRTGGGTVLDTVTRRECGGDP
                     PDPFCRSRLVTDVSGTALFYEGQGTASLGMLRTLVGQMTAFPGRKTMVLISGGMLVSD
                     TPGGRPDLSDMGIQIGKEAALANTAIYTLFLDLSVRKRFAAQTRAGDKGLDNWSRDSA
                     LLGRWLNQFSGAAGGALFNIAVGNAEPALARITTELSSYYLLGVEPAEEDRDGRTHDI
                     SVKTSHPNVTIRGRRWVTVPRRSGPAPAKASASGSKPEAGAAEPAAPAPSPPPARRVV
                     PADVQALADAYDRGAYDSVQKTLAQSTSVANTIRGFRMSDSPWPNDPRRTAVFALELA
                     FAGLRSESSDARDEGGRLLGEYHVRVRQPAGADEFECAWFITE"
BASE COUNT          792 a         1797 c         1758 g          753 t
ORIGIN      
        1 ggccgcgcgg atcctcctcg ccgttcgcct tcgcgtaacc cgcgaccgag aactggaacc
       61 ccggcccgaa ggtgccggcg tcgcgccacg gcacgatcgt cccgacggcg acgcgctcga
      121 cgcccgggat ctcgccgatg cggcgcagcg cctcccggta gaactgcgcg atctgcgccg
      181 gcggccgcga gtaggagacg atcggcacgt tcagcgccag cacgttgcgc atgttcatgc
      241 cggtgttcgc cctctgcagc gccaccaggc tcatgagcag catgccggcg cccgcgagca
      301 ggacgaacga cgccgcaatc tggacgacgg cgaacgcgcg caggcggcgg ttcgtgcccg
      361 ccgtgatccg gacgctgccg ttcgcgatgg cgacgccgtt cgcggaatcg gccgacggca
      421 ggcgcggcac gtaggcgagg agtacggcgg cggcgatcga cagcgccgcc ccgacccaca
      481 gcaggctcga atcgaccgtg acgtcgagcg cgcgcaccga gaaccgggcc gcgtactgcg
      541 ccagcaccgc caccatcggc cgcgcgatca cgacgccgag aatcgcgccg gcgccgcaga
      601 gcagcaggct ctcggcgagg agcgtccgcc gcagcgcgcc cgcgctcgcc ccgagcgccg
      661 cgcggatcgc cagctcccct tcgcggcgca ccgagcgcgc gagaatcagg ttcgccacgt
      721 tcgagcacgc gatgacgaag accagcgccg acgccgccag cagcacgagg aggaccgtgc
      781 gggcgggcga gatgatctga tcgcgcagcc gcgtcgcgtc gatgcggaag tcagcggacg
      841 ccggatagga ctcggggtgc gacttgacca tcgacgcgtg cgccgtccgc agctcggcgc
      901 gcgccccgtc gaggtcggcg cccggcgcga gccggccgaa gagctcggtc atgcggtgca
      961 cgcgcccgtc gaccatcgtg gcgtcgaggt ggtgcgggct ggtcacgacg ttggcgatga
     1021 tctcggtctc ggctgggtac ggaatcgacg gctcgaggat gccgacgatg gtcgcggtgc
     1081 gatcgccgag gcggacgacc ttcccgagca cgttcggatc gctttgcagc cccgtcgtcc
     1141 agaaacggta ggtcagcacc gccgccccgt ccgccttcgg gccatcgtcg gacggcccga
     1201 ggagacgccc gcgtgccggg cgcagtccca tcacgtcgaa gtacgacccg ccgacgaccc
     1261 cggcgcgcac gacgcgcggt tcgccgaggc cgaccatcgt gaactcgatg gtcgagaagt
     1321 cgccgaaggc ggtcagcgac ctgatgctcg cgcgcaggtc gcggatctcc ggcacggaga
     1381 agttgacgtt ctcggtgccc atccccggcg cgctctgacg gatatagatg agccgatcct
     1441 cgtcgcggtt gaccagcggc cgcaggagta cgccgcgcac gacgctgaag atcgcggcgt
     1501 tggcgccgat gccgagcgcc agtgtcaaca cgacggtgat cgtcaggcct ttgacacggg
     1561 tgagggagcg gagggcgtag cgaaagtcgg taatgacgct cataggtgtc ctgttacgcg
     1621 aacgcgtccc ggcctgtaat cgcaggcctc tcgcgctcta tctacaagtc gaagcagacg
     1681 gcccgaaatc gacagcgacg ccggagaaaa tcgtccggac cggccgtgct tcaggatccg
     1741 accaccttca gcagctcggc aagcttgtcg tagctggcgg tgatgcccgt ctccatgccc
     1801 gactggagga cgccgtcgcg cacgtctttg gagatatatg tcatggtctg gacgacggtc
     1861 gtccggccgc cctcctcgat gaactcgatg gtgcacagcg cttcgccttt gtaccacgcg
     1921 tcgtcgaact gctcggtggc gacgagtcgt acgggcgcga cgacctcgcg gtagacgccg
     1981 ctgacgccca tcaccttgac gccgggcttg ctccattccc atcggtaggt gccgccggcg
     2041 cggacgtcca tctcgcagcg gacgagcgac cagccgccga agacgccgag ccattgcgtg
     2101 aggagctccg gcgtcgtgaa cgccttgaag accatccggg cgggggcgtc gaacgtgcgc
     2161 gtcatggcga gctcgcgatc gcccggggtc gtgattttca acgtcgcggc atttgtcatc
     2221 atcgtgtgct cctgctcctg cgcggctgcg tgcgcgtgcg ctgcggcgag gcccgccgct
     2281 ctgcggcctt catctgctcg agaacggcat ccagccggtc gaagctctgc tcccagaagc
     2341 gccggtaatg ctcgagccat tcggtcgcct cggcgagcgg cgcggcgtcc agccggcgag
     2401 ggcggcgctg ggcgtcgcgg ccgcgcgcga tgaggccggc gcgctccagc actttcaggt
     2461 gcttggagat ggccggctgg ctcatcgcga acggcgcgga cagctcggtg acggacgcgg
     2521 cgcccgtggc gagccgggcg agaatcgccc ggcgggtcgg gtcggcgagg gcggcgaacg
     2581 tggcgtcgag ccgggactct gcgctgttca taactctccg gtttgattac ctaaaggtta
     2641 tataaccgat cggtctcgca ctgtcaaccg cggcggcccg gtcgaggtcg cgcaggggaa
     2701 caagacgagg tactgggcag gatggcgcgc cgagttcggc gacgtctgtc gcccgcgccg
     2761 gaccggtcgc tgatcgtcgc ctgcggggac gtccggatcg ccggccgcag gcaatgatca
     2821 gcgccgaggg acgcggctat ttccccgccg cgaggcgcgc ctgcgccgcg tcgtagctct
     2881 cgccgtaaat cgacggcacc ttcgcgccca tcgcgcgcag gtaggcgctc aattgtccgc
     2941 gatgatggat cgtgtagtgc agccccatct gcaggtacgt gaccgccggg cgcgtgaaca
     3001 tgccgcgaaa attcacgggc ttcaccagcg cgtcgccgtc gaccgccgcc agcgccgtgc
     3061 gcgccgcggc atggctggcc gaataccact ccgcgatttc cgccggcgtc cgcgcggtcg
     3121 cgggaatcag attctgcagg ctgaactcgc ccgcgatcac ggtgtcgacg aaccgcacgt
     3181 ccgcggccgc gatgtgcctg agcagatcca tcgcggttcg cgatgccgga tcgggacgat
     3241 agtcgcccgc cgcgactgga actgctgcca ggacgcgcgc ggtggtcgcg ctctcgatct
     3301 cgagcggttt cagatagagg tcacgcagcc acaccgcctg ttcagtggtc atgttcatga
     3361 ggactcctcg gcgcaccggc gcaaaagctc cgatagtaac aggccttgtg ataaggtagc
     3421 cgccagtccc ctctgcaggt cagtcagatg agtcgacggt tgacgctttt cacggcggcg
     3481 cttctggcgt atgcagccac gcttgctgcc cagacctccg gacaggcgac gcctcagcgc
     3541 ccggacccgg atgccccggc gccgttccgc gtctcggtcg acgtcgtcgc cgtcgacgtc
     3601 caggtcatcg accgcgacgg ccgtccggtc ccggatctcg gcccggaaaa gttctccgtc
     3661 acgatcaacg gccggcggcg gcgcgtcgtg tcggccgaac gcatcggcag cgacatgggc
     3721 gaagacggcc gctctgcggc gccgcgcgcc atcgcctcgg ttcctgcccg cgtcatcatg
     3781 atcgcggtcg actgcatcag cttcgacgcc accgaatcgc gcgacgtcat ccaggcggtg
     3841 cgccagttcg tgcgccagct ctccccggac gacatggtcg gcctctccgc gtatccgaac
     3901 ggcccgaagg tcgatcccac gcgcgaccac gacatcgtcg tccgcgcgct cgaccaggtc
     3961 gtcggccagc gcgatctcgc agagatcagc cagttccacc tgcgcccctc cgagatcgtc
     4021 gacatcatga acgagctgta tcgcaccggc ggcggcaccg tcctcgacac ggtcacccgg
     4081 cgcgagtgcg gcggtgatcc tccggatccg ttctgccgga gccggctggt caccgatgtc
     4141 agcggcaccg cgcttttcta cgaaggccag ggcaccgcga gcctcgggat gcttcgcacg
     4201 ctcgtcggcc agatgacggc gttccccggc cgcaagacga tggtcctgat cagcggcggc
     4261 atgctcgtca gcgacacgcc gggcggccgc ccggatctga gcgacatggg cattcagatc
     4321 ggaaaggaag ccgcgctcgc caacacggcg atctacaccc tgttcctcga cttgagcgtg
     4381 cgcaagcgct ttgcggcgca gacgcgcgcc ggcgacaagg gcctggacaa ctggagtcgc
     4441 gacagcgcgc tgctcgggcg ctggctgaac cagttctccg gcgccgccgg cggcgcgctc
     4501 ttcaacatcg cggtcggcaa cgccgagccg gcgctcgccc gcatcaccac cgagctctcg
     4561 tcctactacc tgctcggcgt cgagccggcg gaggaggacc gcgatggacg gacgcacgac
     4621 atctcggtga agaccagcca tccgaacgtg acgattcgcg gccggcgctg ggtgacggtg
     4681 ccgcggcgca gcggacccgc gccggcgaag gcttcggcct ccggcagcaa gccggaggcg
     4741 ggcgctgccg agccggcggc gccagcgcct tctccgccgc ccgcgcgccg cgtcgtcccg
     4801 gccgacgtgc aggcgctcgc cgacgcgtac gatcgcggcg cctacgactc ggtacagaag
     4861 acgctcgcgc aatcgaccag cgtcgcgaac acgatccgcg gcttccggat gtccgacagc
     4921 ccgtggccga acgacccgcg gcgcacggcc gtcttcgcgc tggagctcgc cttcgccggt
     4981 ctgcgcagcg agagcagcga tgcccgcgac gagggcgggc ggctgctcgg cgagtaccac
     5041 gtgcgcgtgc gccagccggc gggcgccgac gagttcgagt gcgcctggtt catcaccgag
//
LOCUS       DASSYW010000530         2286 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_700923, whole genome shotgun sequence.
ACCESSION   DASSYW010000530 DASSYW010000000
VERSION     DASSYW010000530.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2286)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2286)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2286
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_700923"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..496
                     /locus_tag="VFN38_08450"
     CDS             <1..496
                     /locus_tag="VFN38_08450"
                     /inference="COORDINATES: protein motif:HMM:TIGR01670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HAD hydrolase family protein"
                     /protein_id="HET9011832.1"
                     /translation="GIYLGATDGKPLEFKRYDIQDGLGIHLLQRAGVRVAIITGRVSE
                     SVRLRAAELGIDDVAQDAQAQKLPAFLGMLDRHGIAPSEAAFIGDDFPDMAVLRLVGL
                     PVAVANAVPEVKAACTMTLGRSGGQGAVREFAELLMKARGDWTSVTDRYVAERSLPLA
                     ELDR"
     gene            493..1458
                     /locus_tag="VFN38_08455"
     CDS             493..1458
                     /locus_tag="VFN38_08455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KpsF/GutQ family sugar-phosphate isomerase"
                     /protein_id="HET9011833.1"
                     /translation="MTPEQIVERGRRVVRLEREALATVEERLGESFARAVAMIAESKG
                     RVIVAGVGKSGLIGRKIAATLTSTGSPALFLHPVESAHGDLGIVGSEDVAILLSKSGE
                     SDELLVLLEHLQGLGVRTIAITGERSSGLARLCDVALDAWVREEACPHDLAPTTSTTA
                     ALALGDALAVALLEHKGFRREDFARLHPGGALGRRLVTLVDEVMLTEPLPVLPPGALL
                     RQAVVVLAEQRGIVLVADAERRLHGVLTAGDLTRLMEHETDILTEPVERIMTRSPRSA
                     RLGELASAVAYRMETHGIMAMPVLDGADRLAGVVHLHDLLRARVA"
     gene            1458..2006
                     /gene="lptC"
                     /locus_tag="VFN38_08460"
     CDS             1458..2006
                     /gene="lptC"
                     /locus_tag="VFN38_08460"
                     /inference="COORDINATES: protein motif:HMM:TIGR04409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter periplasmic protein
                     LptC"
                     /protein_id="HET9011834.1"
                     /translation="MRSVVALAACAVAALAACSRQGAAPPVKSGASMADSAEQVMYNV
                     HSLLTNDGIQRGEMFSDSVYIFDDNTRFELRRVRATFNTATGVKDGTMKGDRGRYNLR
                     QQVLEGFGNVVITTNDGKRLTSPHVRYNQASNEVSSDSAFTMVEPGDTLSGIGFRADP
                     QLTHVTVLKGARGRGSITLPGQ"
     gene            2075..>2286
                     /locus_tag="VFN38_08465"
     CDS             2075..>2286
                     /locus_tag="VFN38_08465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011835.1"
                     /translation="MPAPSGRCRLQLTADHALNSFKLPSGQLNVFTGGNVVIRCPAQG
                     LVLRSDSLESYGDEGRILFIGHADYS"
BASE COUNT          326 a          806 c          827 g          327 t
ORIGIN      
        1 cggcatctac ctcggtgcca ccgatggcaa gccgctcgag ttcaagcgct acgacatcca
       61 ggacggcctc ggcattcacc tcttgcagcg cgcgggcgtc cgcgtcgcca tcatcaccgg
      121 ccgggtgtcg gagagcgtgc ggctgcgcgc cgccgagctc gggatcgacg acgtggcgca
      181 ggacgcccag gcgcagaagc tgcccgcctt tctgggcatg ctggaccgcc acggcatcgc
      241 gccgtcggag gccgccttca tcggcgacga tttcccggac atggcggtgc tccggctcgt
      301 cggcctgccg gtggcggtgg ccaacgcggt gcccgaggtg aaggcggcgt gcaccatgac
      361 gctcggcagg agcgggggac agggcgcggt gcgcgagttc gccgagctgc tgatgaaggc
      421 gcgcggggac tggacgtcgg tcaccgaccg ctacgtcgcc gagcgctccc ttccgctcgc
      481 ggagctcgac cgatgacccc cgagcagatc gtggagcggg ggcgtcgcgt ggtacgcctg
      541 gagcgcgagg cgctcgccac cgtcgaggag cggctcggcg agtcgttcgc ccgcgccgtg
      601 gcgatgatcg ccgagtcgaa gggccgcgtc atcgtggccg gggtgggcaa gtcggggctc
      661 atcggccgca agatcgccgc gactctcacc tccacgggct cgccggcgtt gttcctccat
      721 ccggtggaaa gcgcgcacgg cgatctcggc atcgtcgggt cggaggacgt cgccattctc
      781 ctctccaagt ccggcgaatc ggacgagctc ctcgtcctgc tcgaacatct gcaggggctg
      841 ggggtacgga ccatcgccat caccggcgag cggagctcgg ggctggcgcg gctctgcgac
      901 gtggcgctcg acgcgtgggt gcgcgaggag gcgtgcccgc acgaccttgc gcccaccacg
      961 agcacgacgg ccgccctggc gctcggtgac gccctcgccg tggcgctgct ggagcacaag
     1021 ggcttccgtc gcgaggactt cgcccggctg catccgggcg gtgcgctggg ccggcggctg
     1081 gtcaccctgg tggacgaggt gatgctcacc gagccgctgc cggtgctgcc gcccggcgcg
     1141 ctgctgcgcc aggcggtggt ggtgctggcc gagcagcgcg gcatcgtgct cgtcgccgac
     1201 gcggagcggc ggctgcacgg cgtactcacc gcgggagacc tgacgcgact catggagcac
     1261 gagacggaca tcctcaccga gccggtcgag cggatcatga cgcgctcccc gcgcagcgcg
     1321 cggctcggcg agctggcgag cgcggtggcc tatcgaatgg agacgcacgg catcatggcg
     1381 atgccggtgc tcgacggggc cgaccggctc gccggcgtgg tccacctgca cgacctcctg
     1441 cgcgcgaggg tcgcctgatg cgctccgtcg tggcgctggc cgcgtgcgcc gtggcggccc
     1501 tggctgcgtg ctcccggcag ggcgccgccc cccccgtgaa gagcggcgcg tcgatggccg
     1561 acagcgccga gcaggtgatg tacaacgtgc actccctgct cacgaacgac gggatccagc
     1621 gcggagagat gttctccgac tcggtctaca tcttcgacga caacacccgg ttcgagctgc
     1681 gccgcgtgcg cgcgaccttc aacaccgcca ccggggtgaa ggacggcacg atgaagggag
     1741 accggggacg ctacaacctc cggcagcagg tgttggaagg gttcggcaac gtcgtgatca
     1801 ccacgaacga cggcaagcgg ctcacctcgc cgcacgtgcg ctacaaccag gccagcaacg
     1861 aggtgtccag cgacagcgcg ttcaccatgg tggagccggg cgacaccctg tccggaatcg
     1921 gcttccgcgc cgatccgcag ctcacccacg tcaccgtcct gaagggcgcg cgagggcggg
     1981 gcagcatcac cttgcccggg caatgaggat ggccggccga gcggcgcacc tcgcggtcct
     2041 cgcgcttctg cccgtcgtgg cgggggcgca gggcatgcct gcgccctccg gccgctgccg
     2101 gctgcagctc accgcggacc acgcgctgaa ctcgttcaag ctccccagcg gacagctcaa
     2161 cgtcttcacc ggcggcaacg tggtgatccg ctgtcccgcg caggggctcg tcctgcgctc
     2221 cgacagcctg gagtcgtacg gcgacgaagg gcgcatcctc ttcatcggcc acgccgacta
     2281 ttcgga
//
LOCUS       DASSYW010000531         2377 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1024694, whole genome shotgun sequence.
ACCESSION   DASSYW010000531 DASSYW010000000
VERSION     DASSYW010000531.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2377)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2377)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2377
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1024694"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..474
                     /locus_tag="VFN38_08470"
     CDS             <1..474
                     /locus_tag="VFN38_08470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011836.1"
                     /translation="RRAVFRAGRAGVALVAALGLLLLAAGLLAGSATASVELGRTARS
                     RSWAARAELETQRAIGLVLQGWDATLDSLPIGASVDRVVEPSAPSGPPVIVRARVRRL
                     SARTFAAVVTARVGVSGQAGARRARLLLQREASDSGSAAAAGVSTVPRWSVVDLR"
     gene            814..1860
                     /gene="pilM"
                     /locus_tag="VFN38_08475"
     CDS             814..1860
                     /gene="pilM"
                     /locus_tag="VFN38_08475"
                     /inference="COORDINATES: protein motif:HMM:TIGR01175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009297 - pilus assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus assembly protein PilM"
                     /protein_id="HET9011837.1"
                     /translation="MALFGRSKATIGLDIGSGLIKVAVIDHSKKEPELVRVSVVPLLA
                     DAIVEGEVRDPGIVAEAIQSALAAADVPKAKNVVTAVGGRDVIIKKIQIERVKEAQAR
                     ELMRWEAEQHVPFDMESVELDFQILDPDADGVEMSVLLVAAKRELIESKMRMLTDAGL
                     DGGVVDVDAFALHNAFEVNHPNAMDGIVALVNMGHEVTNINILENGIPILTRDIALGT
                     RRFREDLQRERGLDADEAQELIQGYDRSPHLDAVLESRGEEIAVGIERAAAFLASSSR
                     TGGQVKSVFTCGGGSRIPGLTDVLADRLRLKVQQANPLANLRIRDGAMDNLVTDEVAP
                     LLMLPIGLALRKRA"
     gene            1874..>2377
                     /locus_tag="VFN38_08480"
     CDS             1874..>2377
                     /locus_tag="VFN38_08480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011838.1"
                     /translation="MIEINLLPGTKKKSRRGGGGGGGGGGGSSLSMPKVDFAAWIESM
                     RERIREPWLIGAVVVCAAAAGLVGVFYVRQAARESTLEQALQKAVQDSTRFASVLRER
                     EMAEAKRDTVLRSLNLIRAIDDDRFVWPHVMDEVSRALPPYTWIVSLGFTGAGQGQQA
                     ITTVHTAG"
BASE COUNT          357 a          784 c          850 g          386 t
ORIGIN      
        1 cgtcgcgccg tattccgggc cggccgagcc ggcgtggcgc tcgtggcggc actgggcctg
       61 ctcctgctgg ccgccggcct tctggccggc agcgcaaccg cttccgtgga gctgggccgg
      121 accgcacgta gtcgcagctg ggcggcgcgt gccgagctcg aaacgcagcg ggcgatcggc
      181 ctcgtgctcc aggggtggga cgcgacgctc gattcgctgc cgatcggcgc gtccgtcgat
      241 cgagtggtgg aaccgtcggc gccgtccggt ccgccggtca tcgtgcgcgc ccgcgtgcgg
      301 cggctctcgg cgcggacctt cgccgccgtc gtcacggcgc gcgtcggcgt gtccgggcag
      361 gccggcgcgc ggcgggcgcg attgcttctc cagcgcgagg cgtccgattc cgggagtgcc
      421 gcggcggcgg gagtgtcgac ggtcccgcga tggtccgtcg tcgatctccg gtgacgcgcg
      481 acgccgccac cgacacgggt tccggccggc gccgcagtga cgcggggcac agagcggcgc
      541 tggtgcttgt taccatcggc ggagtcggtc gtgttttcgg tgttagtgac cgacgccggt
      601 cacgatggct gattccgccc cattcagctc ggggtggacg atgatgtaag tgcaggcaag
      661 gccgcggcat gcagtgctcg gcctagagca acttcgaaag caccgttgcg cgagatgttt
      721 tcggtcgcgc gcaccgactg tcccgccgtc ccacgcaccg ccgtgcccct gaaggtccct
      781 cctggggcgg tgcctcgctc tccgaacttc cccatggcct tgtttggtcg ctcgaaagcc
      841 acgatcggtc tcgacatcgg gtccggtctg atcaaggtcg cggtgatcga ccactccaag
      901 aaggaaccgg agctggtgcg tgtctccgtc gttcctctcc tcgccgacgc catcgtcgaa
      961 ggcgaggtga gggatcccgg catcgtcgcg gaagcgatcc aatcggcgct cgccgccgcg
     1021 gacgtcccca aggccaagaa cgtcgtgacc gccgtgggcg gtcgcgacgt gatcatcaag
     1081 aagatccaga tcgagcgcgt gaaggaagcg caggcgcgcg agctgatgcg ctgggaagcc
     1141 gagcagcacg tgccattcga catggagtcg gtggagctgg acttccagat cctcgatccc
     1201 gacgccgacg gcgtggagat gagcgtgctc ctcgtcgccg ccaagcgcga gctcatcgag
     1261 tccaagatgc gcatgctcac cgatgccggc ctggatggcg gcgtcgtgga cgtggacgcg
     1321 ttcgccctgc acaacgcctt cgaggtgaat cacccgaacg cgatggacgg catcgtggcg
     1381 ctcgtgaaca tgggccacga agtgaccaac atcaacattc tcgagaacgg catcccgatc
     1441 ctgacgcgcg acatcgcgct gggcactcgg cggttccgtg aagacctcca gcgcgagcgc
     1501 ggtctcgacg ccgacgaggc gcaggagctg atccagggct acgaccgcag cccgcacctg
     1561 gacgccgtgc tggagagccg gggcgaggaa atcgccgtcg gcatcgagcg ggcggccgcc
     1621 ttcctcgcct cgtcctcgcg taccggcggg caggtgaagt cggtgttcac ctgtggtggg
     1681 gggtcccgga ttcccggcct caccgatgtc ctcgccgacc ggctgcgcct caaggtgcag
     1741 caggccaatc cgctggccaa cctgcgaatc cgtgacgggg cgatggacaa tctcgtcacc
     1801 gatgaggtcg caccgctcct gatgctcccc atcgggttgg cgctgcgcaa gagagcatga
     1861 gccgagacgc cgaatgatcg aaatcaatct tctccccggc acgaagaaga agagccgcag
     1921 gggcggcgga ggcggtggtg gtggtggcgg cgggtcgagc ctgtccatgc cgaaggtgga
     1981 tttcgcggcg tggatcgagt cgatgcgcga gcgcattcgc gagccctggc tgatcggagc
     2041 cgtggtcgtg tgcgcggcag ccgccggcct cgtcggcgtg ttctacgtgc ggcaggccgc
     2101 gcgcgagtcc acgctggaac aggcgctcca gaaggcggtg caggattcga cgcgcttcgc
     2161 ttcggtgctg cgcgagcggg agatggcgga ggccaagcgt gacacggtcc ttcgctcgct
     2221 caacctgatc cgcgccatcg acgacgaccg cttcgtgtgg ccgcacgtga tggacgaagt
     2281 gagtcgcgcc ctgccgccgt acacctggat cgtgtcgctc ggcttcaccg gcgccggtca
     2341 gggccagcag gcgatcacca cggtgcacac tgcaggg
//
LOCUS       DASSYW010000532         3480 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_478324, whole genome shotgun sequence.
ACCESSION   DASSYW010000532 DASSYW010000000
VERSION     DASSYW010000532.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3480)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3480)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3480
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_478324"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..289
                     /locus_tag="VFN38_08485"
     CDS             <1..289
                     /locus_tag="VFN38_08485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HET9011839.1"
                     /translation="AIVFLDEPTGGVDPITRRQFWEMIYAAAARGTTVFATTHYMDEA
                     EYCDRISIMVEGRIAAMGTPEELKQQFGVDSVDEVFVRLARPSALAQAGAR"
     gene            292..1407
                     /locus_tag="VFN38_08490"
     CDS             292..1407
                     /locus_tag="VFN38_08490"
                     /inference="COORDINATES: protein motif:HMM:NF024091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HET9011840.1"
                     /translation="MALRTLALRAFMVKELRHILRDRQTLLILLLLPLAQVVVFGFAL
                     RTDVNDIRVAFVDPAPDHATSALRGRFAGNGRFRIVGTAATTAAIEPLVRRGDADVAI
                     VFEPGFAGRLAAGTPARLLLITDASDPNTGSRMQAQAGAVIAAYGAELGEGGRAVRIV
                     ARTRMRYNPTLESVNLFVPGLIALVLTLVSALMSAISLSREKERGTLEILLVSPLRPW
                     QIIVGKVMPYLLLAFANVVTALLAAWLVFRVPFRGSLLLLLLASLLYAMVGLALGVLI
                     AARTSSQRAAMLGAMVGTMLPSTLLSGMIFPIASLPDWLQPVTFVVPARWFIVISRGI
                     MLKGVGLASLWRELVVLALMLVLFLVAATRSFKARLA"
     gene            1410..2561
                     /locus_tag="VFN38_08495"
     CDS             1410..2561
                     /locus_tag="VFN38_08495"
                     /inference="COORDINATES: protein motif:HMM:NF024110.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HET9011841.1"
                     /translation="MRALRFLLRKEFLQIFRDRVIVGMLFVMPMVQLLLLANAATFEV
                     RSARLYVVDEDHSAMSRGVVERLTASGRFLLTAASPSLALGDDAMLNRRVDAILAVPA
                     GFERDVVRQRRGTVLLVLDAEDGAAAGVTQAYAGEILAGYSRELAAEVSPALATVGAR
                     DELPPLRGRPAIEVRRRGWYNAELEYRDFMVPGILVVLVTIIGTLLTAMNIVREKESG
                     TLDQLNVTPVTRSTFIAAKLIPLWSLALVALGLGLAVGHFVLGVPIRGSLLLVFFAAA
                     IYLVGALGIGLWVSTVAETQQQAMFVSYSIMLVYLLMSGIFTPVRGMPVWAQWIAQGS
                     PVMHFTQLMRAVLLKGAGVADVARELAMLAAIGGAVLTLAVRQYRKRAA"
     gene            complement(2604..>3480)
                     /locus_tag="VFN38_08500"
     CDS             complement(2604..>3480)
                     /locus_tag="VFN38_08500"
                     /inference="COORDINATES: protein motif:HMM:NF012343.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HET9011842.1"
                     /translation="YFLVISTPVGLHHQFQDPGIPASWKLFHTFLTMAISFPSLVTAF
                     TICASLEVAGRLRGGAGLFGWIRTLPWGNPVVSSVLCAMLLFLVGGFGGAVNAAYALN
                     SMVHNTAWIHGHFHTTVGSAAALTYMGAMYWLVPRITGRELSFRGTLARWQPFLWFVG
                     MLFFSIPSHVAGLMGLPRRVFTTDYAGAPQAAQWQGLTLASAAGGVILFISAMSFVAV
                     IGHTLLFGRRTAVARLVWADSLGMPDDGFRTTVWDRLGLWWAAAAVLVLVAYAIPLWD
                     ILHLTRYGSPGFKPF"
BASE COUNT          479 a         1187 c         1272 g          542 t
ORIGIN      
        1 cgcgatcgtc ttcctcgacg agcccaccgg cggcgtggac ccgatcacgc gccggcagtt
       61 ctgggagatg atctacgcgg cggccgcgcg cggcacgacc gtattcgcga ccacgcatta
      121 catggacgaa gcggagtact gcgatcgcat ctcgatcatg gtcgagggac gcatcgcggc
      181 gatggggacg cccgaagagc tgaagcagca gttcggcgtg gactcggtgg acgaggtgtt
      241 cgtgcggctc gcccgcccat cggcgctcgc gcaggcgggg gcgaggtagc catggctctc
      301 cggaccttgg cgctgcgggc gttcatggtg aaggagctgc gccacatcct ccgcgaccgt
      361 cagacgctgc tcatcctcct gctgctgccg ctggcccagg tggtggtgtt cggcttcgcg
      421 ctgcgcaccg acgtgaacga catccgggtc gccttcgtcg atcccgcgcc ggaccacgcg
      481 acgagcgccc tgcgcgggcg gttcgcgggc aacggccgct tccgcatcgt cggtaccgcc
      541 gcgacgacgg cggcgatcga gccgctcgtc cggcgcggcg acgcggacgt cgcgatcgtt
      601 ttcgagccgg gcttcgccgg ccggctggcg gcggggacgc cggcgcggct gctcctcatc
      661 accgatgcat cggacccgaa cacgggaagc cggatgcagg cccaggccgg cgcggtgatc
      721 gcggcctacg gggccgagct gggggagggg ggacgcgcgg tgcggatcgt ggcgcggacg
      781 cgcatgcgct acaacccgac gctggagagc gtgaacctct tcgtgccggg cctcatcgcg
      841 ctcgtcctca cgctcgtctc ggcgctgatg agcgcgatct cgctgtcgcg cgagaaggag
      901 cgcggcacgc tcgagatcct cctcgtctct cccctccgcc cctggcagat catcgtcggg
      961 aaggtgatgc cctacctgct gctcgcgttc gcgaacgtgg tcacggcgct gctcgcggca
     1021 tggctcgtct tccgggtgcc ctttcgcggg agccttctgc tgctgctcct cgccagcctc
     1081 ctctacgcga tggtggggct cgcgctcggc gtcctgatcg cggcacggac gtcgtcgcag
     1141 cgggcggcga tgctgggggc gatggtgggg acgatgctgc ccagcacgct gctctcgggg
     1201 atgatcttcc cgatcgccag cctgcccgac tggctgcagc cggtgacgtt cgtcgtcccg
     1261 gcgcgctggt tcatcgtgat ctcgcggggg atcatgctca agggggtggg gctggcgtcg
     1321 ctctggcggg agctcgtggt gctcgcgctg atgctcgtcc tcttcctcgt ggcggcgaca
     1381 cggagcttca aggcgaggct cgcctgacga tgcgagccct gcgcttcctc ctccggaagg
     1441 agttcctgca gatcttccgc gaccgcgtca tcgtgggcat gctgttcgtg atgccgatgg
     1501 tgcagctcct cctcctcgcg aacgcggcga cgttcgaggt caggagcgcg cgcctgtacg
     1561 tggtggacga ggaccacagc gcgatgtcgc gcggcgtggt ggagcgtctc acggcgtcgg
     1621 ggcgctttct cctcacggcc gcctcgccgt cgctggcgct gggtgacgac gccatgctga
     1681 atcgccgggt ggacgccatc ctcgccgtcc cggcggggtt cgagcgcgac gtcgtgcgcc
     1741 agcggcgggg gacggtgctg ctcgtcctcg acgccgagga cggggcggcg gcgggggtca
     1801 cgcaggcgta cgccggcgag atcctggcgg gctactcccg cgagctggcg gccgaggtga
     1861 gcccggcgct cgcgaccgtc ggcgcgcgcg acgagctccc acccctgcgc ggccggccgg
     1921 cgatcgaggt gcggcggcgc ggctggtaca acgcggagct cgagtaccgg gacttcatgg
     1981 tgccgggcat cctcgtggtg ctcgtcacga tcatcgggac gctgctcacg gcgatgaaca
     2041 tcgtgcgcga gaaggagtcg gggacgctgg accagctcaa cgtcacgccg gtcacccgct
     2101 cgaccttcat cgccgccaag ctgatcccgc tctggagcct ggcgctcgtg gccctcggcc
     2161 tcggcctcgc cgtcggtcac ttcgtgctcg gcgtccccat ccggggcagc ctcctcctcg
     2221 tgttcttcgc cgcggcgatc tacctcgtcg gcgcgctcgg catcggactc tgggtctcca
     2281 cagtcgccga gacgcagcag caggcgatgt tcgtgtcgta ctcgatcatg ctcgtctatc
     2341 tcctgatgag cgggatcttc acgccggtgc gcggcatgcc ggtgtgggcg cagtggatcg
     2401 cccagggcag tcccgtcatg cacttcacgc agctcatgcg ggccgtcctc ctcaagggcg
     2461 ccggagtggc ggacgtggcg cgcgagctcg cgatgctcgc cgcgatcggt ggggcggtgc
     2521 tgacgctcgc cgtgcgacag taccgcaagc gggcggcgtg agcgcggccg tcgtccgcgc
     2581 cgttcgctcg acgaacgtcg ccgtcagaat ggcttgaacc ccgggctccc gtagcgcgtg
     2641 aggtgcagga tgtcccagag gggaatggcg taggcgacga ggacgagcac cgcggccgcg
     2701 gcccaccaga ggccgagccg gtcccacacc gtcgtccgga agccgtcgtc gggcatgccg
     2761 agcgaatcgg cccagacgag gcgcgccacc gcggtgcggc gtccgaagag gagtgtgtgc
     2821 ccgatcaccg cgacgaacga catggcgctg atgaagagga tgacgccgcc ggccgccgac
     2881 gcgagggtga gcccctgcca ctgcgccgcc tgcggggcgc cggcgtagtc cgtcgtgaac
     2941 acccgccggg gaagtcccat cagccccgcg acgtggctcg ggatcgagaa gaagagcatc
     3001 ccgacgaacc agaggaaggg ctgccagcgg gcgagcgtgc cgcggaacga gagctcgcgg
     3061 ccggtgatgc gcggcacgag ccagtacatg gcgcccatgt acgtcagcgc ggccgcgctc
     3121 ccgaccgtcg tgtggaagtg cccgtggatc cacgccgtgt tgtggaccat cgagttgagc
     3181 gcgtaggccg cgttcaccgc gccgccgaag ccgccgacga gaaagagcag catcgcgcac
     3241 agcacgctcg acaccaccgg gttcccccag gggagggtgc ggatccagcc gaacagcccg
     3301 gcgccgccgc gcaggcgccc cgccacctcg agcgaggcgc agatcgtgaa cgccgtgacg
     3361 aggctcggga aggagatcgc catcgtcagg aacgtgtgga agagcttcca gctcgccggg
     3421 atgcccgggt cctggaactg gtggtgcagc cccaccggcg tcgagatgac gaggaagtag
//
LOCUS       DASSYW010000533         2250 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1232783, whole genome shotgun sequence.
ACCESSION   DASSYW010000533 DASSYW010000000
VERSION     DASSYW010000533.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2250)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2250)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2250
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1232783"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1027
                     /locus_tag="VFN38_08505"
     CDS             <1..1027
                     /locus_tag="VFN38_08505"
                     /inference="COORDINATES: protein motif:HMM:NF013717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="molybdopterin oxidoreductase family protein"
                     /protein_id="HET9011843.1"
                     /translation="LAGLWNVPVERIPTKRGLAYPDIIEAALDKKIRALWIIATNPVV
                     SFPNFGSLTQALEGLEFLVVQDGYHPTPTTEFAHLMLPAAIWGEKDGTYTNSERRVSR
                     VNKAVSPPGEARSDFDIFLSLAAVLGVKDEIFPGWSKPGDAFEEWKKVSAGRLCDYSG
                     MTYRAIEHHGGIQWPFPAGATDPDEPRRLYADGRFQTDDGKAKLIAADWEPFPEQPNA
                     EFPLVLNTGRTVEHWHTRTKTGKVPILERLSPNAWVEMNPRDARQLRLKPQDKVDVVS
                     RRGRVRGVELRVTETVAPGQIFVPFHYMEANANQMTQSAFDPFSREPNYKQSAVRVER
                     FVDGGAR"
     gene            1024..>2250
                     /locus_tag="VFN38_08510"
     CDS             1024..>2250
                     /locus_tag="VFN38_08510"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HET9011844.1"
                     /translation="MRRLVVVGNGMAGMNCLEQILKHEPRFTVTVFGDETHVNYNRIM
                     LSSVLAGEKAADDIVINGLDWYQKNDIELRLGVRIVDVDRDAKTVTGDDGSVTPYDVL
                     LLATGSSAFMPPIQGLDKDGVFVFRTLDDTRGLLERSGAGKKAIVIGGGLLGLEAARG
                     LQVQGCDVTVVHLMSTLMERQLDPDGGQYLLGKMEDLGVRVLLGRTTTAILGNGHVEG
                     VALSDDSVLEADLVVVAAGIRPNVDLAHKAKLLVNRGVVVNDHMETSADDIFAVGECV
                     EHRGVCYGLVAPLYDQAKVLAATMTGNKGPVYTGTVPAAKLKIMGVDVFSAGDWSEQN
                     AEPVRFEDRALGVYKKLTVREGKLAGVILVGDTSDSHRYMDWLRTDADISSQRRHLLF
                     PPPSADAGGEVASMSDA"
BASE COUNT          383 a          742 c          794 g          331 t
ORIGIN      
        1 gctggcgggg ttgtggaacg tcccggtgga gcgcattccg accaagcgcg ggctcgcgta
       61 tcccgacatc atcgaggcgg cgctcgacaa gaagatccgg gcgctctgga tcatcgccac
      121 caacccggtg gtctcgttcc ccaacttcgg ctcgctgacg caggcgctcg aggggctcga
      181 attcctggtg gtgcaggacg gctaccaccc gacgcccacc actgagttcg cccacctgat
      241 gctgccggcc gccatctggg gcgagaagga cggcacgtat accaactcgg aacggcgcgt
      301 gagccgtgtg aacaaggcgg tgtctccgcc cggcgaagcg cggtcggact tcgacatctt
      361 cctgtcgctc gcggccgtgc tcggggtgaa ggacgagatc ttcccgggct ggtcgaagcc
      421 gggcgacgcc ttcgaggagt ggaagaaggt gtcggccggc cggctctgcg actactcggg
      481 gatgacctac cgcgccatcg agcaccacgg cggcatccag tggcccttcc cggcgggtgc
      541 caccgatccc gacgagccgc gacgtctcta cgctgatggc cgcttccaga ccgacgacgg
      601 caaggcgaaa ttgattgccg ccgactggga gccgttcccc gagcagccga acgccgagtt
      661 cccgctcgtg ctcaacacgg gccgcacggt ggagcactgg cacacgcgca ccaagaccgg
      721 caaggtgccg atcctcgagc ggctgtcgcc gaatgcgtgg gtggagatga acccgcgtga
      781 cgcgcgccag ctgcgtctca agccgcagga caaggtggac gtggtgtcgc gccgcgggcg
      841 cgtgcgcggc gtcgaactgc gggtgaccga aacggtggcc ccggggcaga tcttcgtgcc
      901 cttccactac atggaagcca acgcgaacca gatgacgcag agcgcgttcg acccgttctc
      961 gcgcgagccc aattacaagc agtcggcggt ccgggtggag cgcttcgtcg acggaggtgc
     1021 gcgatgaggc gcctggtggt cgtcggcaac ggcatggcgg ggatgaactg cctcgagcag
     1081 atcctcaagc acgagccgcg cttcacggtg acggtcttcg gcgacgagac ccacgtcaac
     1141 tacaaccgga tcatgctctc gtcggtgctc gccggcgaga aggcggccga cgacatcgtc
     1201 atcaacgggc tcgactggta tcagaagaac gacatcgagc tgcgcctcgg cgtgcgcatc
     1261 gtcgacgtcg accgcgacgc gaagaccgtg accggcgacg acggcagcgt gacgccgtat
     1321 gacgtgctgc tgctcgcgac cggcagcagc gcgttcatgc cgccgatcca ggggctcgac
     1381 aaggacggcg tgttcgtctt ccgcacgctc gacgacacgc gcggcctgct cgagcgctcg
     1441 ggcgcgggca agaaggcgat cgtgatcggc ggcggcctgc tcgggctcga ggccgcgcgc
     1501 ggactgcagg tgcaggggtg cgacgtgacc gtcgtgcacc tgatgtccac gctgatggaa
     1561 cggcagctcg atcccgacgg cggccaatac ctgctcggca agatggagga cctgggcgtc
     1621 cgggtgctgc tgggccgcac cacgacggcg atcctgggca acggccacgt ggaaggcgtg
     1681 gcgctgtccg acgacagcgt gctcgaggcc gatctcgtgg tggtggcggc cggcatccgg
     1741 cccaacgtgg acctggcgca caaggcgaag ctcctcgtga accgcggcgt ggtcgtgaac
     1801 gaccacatgg agacgtccgc cgacgacatc tttgccgtcg gcgagtgtgt ggagcaccgc
     1861 ggcgtgtgct acggcctcgt ggcgccgctc tacgaccagg ccaaggtgct ggcggcgacg
     1921 atgacgggca acaagggccc ggtctacacc ggcacggtgc ccgccgcgaa gctcaagatc
     1981 atgggcgtcg acgtcttctc ggccggcgac tggagcgagc agaacgccga gccggtgcgc
     2041 ttcgaggatc gcgcgctcgg cgtctacaag aagctcacgg tccgcgaagg caagctcgcg
     2101 ggcgtcatcc tggtgggcga cacgtcggac agccatcgct acatggactg gctgcgcacg
     2161 gatgccgaca tctccagcca gcgccggcat ctgctcttcc caccgccatc cgccgacgcg
     2221 ggcggggagg tggcgtcgat gagcgacgcc
//
LOCUS       DASSYW010000534         2176 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_994846, whole genome shotgun sequence.
ACCESSION   DASSYW010000534 DASSYW010000000
VERSION     DASSYW010000534.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2176)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2176)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2176
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_994846"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..226
                     /locus_tag="VFN38_08515"
     CDS             <1..226
                     /locus_tag="VFN38_08515"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HET9011845.1"
                     /translation="DKFGTSVAQSLRVYSETLRTKRRQRAEEAAAKTGVKMVFPLVFC
                     IFPAIWVVTIGPAAIRFVTVLFPLMESTHR"
     gene            235..597
                     /locus_tag="VFN38_08520"
     CDS             235..597
                     /locus_tag="VFN38_08520"
                     /inference="COORDINATES: protein motif:HMM:NF014678.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF192 domain-containing protein"
                     /protein_id="HET9011846.1"
                     /translation="MPLIATDLDTGAVLASHVVVAATRATRTAGLMSRVSLDPGEALW
                     IVPSRGVHTCWMRFPIDVIALDDKGIIIDRVVNLQPWRIRLPRRGTAGVLELSAGTLD
                     AAGAHIGHRIEFAQGSNR"
     gene            603..1925
                     /locus_tag="VFN38_08525"
     CDS             603..1925
                     /locus_tag="VFN38_08525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011847.1"
                     /translation="MATATAPVVKPDVPAPPTPPNTIEETGLHADALNQLLLKTLVAG
                     EASGTGLSEKLRVPYAVLDSLIQHARIEKLVEVRGATGTGTAGYRYALTDLGRDRAGQ
                     FLDLCRYVGPAPVPIGQYNAYVRAAMAARPYLDRSLLSTGFSDLVVSTPMLDQLGPAV
                     NSGKALFLYGAPGNGKTVVAEGIGRALGGEMHMPFAIDVDGQVITMYDPVSHQKLGEG
                     ATAQSVIAAASHDRRWETIRRPVVVGGELTLEMLDLTFNPISKFYEAPIQLKANGGVF
                     VVDDFGRQRIPPRDLLNRWIVPLESRVDFLTLHTGRKFEIPFNVFIVFATNLKPESLA
                     DEAFLRRIPYKILAKNPTIDEYCRIFELNCRKRGLSFDPVMVEYLERKYYAPRGLQMR
                     ACHPRDLINHVVDICRYTQREPVISRELLDAACGSYFIEEAESQGHGE"
BASE COUNT          349 a          729 c          731 g          367 t
ORIGIN      
        1 cgacaagttc ggcacgagcg tggcacagtc gctgcgcgtc tattcggaga cgctgcgcac
       61 gaagcggcgg cagcgcgccg aagaggccgc ggcgaagacc ggcgtcaaga tggtcttccc
      121 gctggtcttc tgcatcttcc cggcgatctg ggtcgtgacg atcggccccg ccgccattcg
      181 gttcgtcacc gtgctcttcc cgctgatgga gagcacgcac cggtagccgc tgccatgccg
      241 ctgattgcga cagacctcga caccggtgcc gtgctcgcga gccatgtcgt cgtggccgcg
      301 acgcgggcga cgcgcaccgc cggcctcatg tcgcgcgtga gcctggatcc gggcgaggcg
      361 ctctggatcg tgccgagccg cggcgtgcac acgtgttgga tgcggttccc gatcgacgtg
      421 attgcactcg acgacaaggg catcatcatc gatcgcgtcg tcaacctgca gccgtggcgt
      481 attcgcctgc cgcggagggg aacggcgggc gtgctcgaac tcagcgcggg gacgctggac
      541 gcggcgggcg cgcacatcgg gcatcggatc gaatttgcgc aggggagtaa tcgatgacgc
      601 cagtggccac cgcaaccgcg cccgtggtga agccggacgt gccggccccg ccgacgccgc
      661 ccaacaccat cgaggaaacg ggtctgcatg ccgacgcgct caatcagctc ctgctgaaga
      721 cgctcgtcgc gggagaggca agcggcaccg gcctgtccga gaagctgcgt gtcccgtatg
      781 ccgtcctgga ttcattgatc cagcatgcgc gcatcgagaa gctcgtcgag gtccgcgggg
      841 caaccggcac ggggacggcg ggataccggt acgcgctgac ggacctgggc cgcgatcgcg
      901 ccgggcagtt tctcgatctc tgccgctacg tcggccccgc tcctgtgccg atcgggcagt
      961 acaacgccta cgtgcgcgcc gcgatggccg cgcgcccgta cctcgatcgc tcgctgctgt
     1021 cgaccgggtt ctcggacctc gtcgtgagca caccgatgct cgaccagctg gggccggcgg
     1081 tgaactccgg gaaggcgctg tttctctatg gcgcgccggg caacggcaag acggtcgtgg
     1141 cggaaggcat cggccgggcg ctcggcggcg agatgcacat gccgttcgcc atcgacgtcg
     1201 acggccaggt catcacgatg tacgacccgg tgagccacca gaagctcggc gagggcgcca
     1261 ccgcacagag cgtcattgcg gcggccagcc acgaccgcag gtgggaaacg attcgccggc
     1321 ccgtcgtcgt cgggggtgag ttgacgctcg agatgctcga cctcaccttc aatccgatct
     1381 cgaaattcta cgaggcgcca atccagctga aggccaacgg cggggtgttc gtggtcgacg
     1441 acttcggtcg gcagcgcatc ccgccgcgcg atctgctgaa ccgctggatc gtcccgctcg
     1501 agagccgcgt cgacttcctg acgctgcaca cggggcgcaa gttcgagatc ccgttcaacg
     1561 tgttcatcgt gttcgcgacg aacctgaagc cggagtcgct cgccgacgaa gcgttcctgc
     1621 gccgtatccc ctacaagatc ctggcgaaga acccgacgat cgacgagtac tgccgcatct
     1681 tcgagctgaa ctgccggaag cggggactct ccttcgatcc ggtgatggtc gagtatctcg
     1741 agcgcaagta ctacgctccg cgcggcctgc agatgcgcgc ctgccatccg cgcgatctca
     1801 tcaaccacgt cgtcgacatc tgccggtaca cgcaacgcga gccggtgatc tcgcgcgaac
     1861 tgctcgacgc cgcgtgcgga agctatttca tcgaggaagc ggaatcgcag gggcacggcg
     1921 aatgatgaag cgcctcgctc ttacgctgcc cgcgccattc gcgctctcgc cgtcgcgcgc
     1981 ggggcgcttc gcgcgcgccg atgtcgagcg gttgaccgat atcatgtccc gcgcgatcgt
     2041 cgtctgcctg ttctcgatga tggcggtccg cttcggcgcc gacttcgtga agacgggccg
     2101 gatgaccggc ctgctgctgc tcgtcagcga gatactcgtg gtcgtgctca ccgtgatgcg
     2161 gcggtcggcc gcggtc
//
LOCUS       DASSYW010000535         2065 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_757627, whole genome shotgun sequence.
ACCESSION   DASSYW010000535 DASSYW010000000
VERSION     DASSYW010000535.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2065)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2065)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2065
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_757627"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..642)
                     /locus_tag="VFN38_08530"
     CDS             complement(<1..642)
                     /locus_tag="VFN38_08530"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HET9011848.1"
                     /translation="MPVSVAGRPLADRGAGSAPVEDAARIAVVVPSYRVSRSVVDVVR
                     RIGPECAFIYVVDDACPEHSGQRVSDGCRDPRVRVIRHASNEGVGGAVMTGYRQALQD
                     GATIVVKLDGDGQMAPELLPSFVAPLLAGEADYAKGNRFFDLDGLSSMPSVRLWGNAI
                     LSIVSKLSTGYWNIVDPTNGYTAIHASVLRRLPLAKLSRGYFFETDVLFRLNTL"
     gene            complement(766..>2065)
                     /locus_tag="VFN38_08535"
     CDS             complement(766..>2065)
                     /locus_tag="VFN38_08535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011849.1"
                     /translation="LGLPGQLSVDSIIQLYEGRTLHFISFNPPLMSLLLGVLDRLGNA
                     PVGFVVLSQAMLSASSWLVFSQSGRITVPRFCLAAVVLLNPVVLIYVGIVWKDVLLAH
                     AVVLTYLLLASLHHRGKPMTPPLAALALLLLTVIVGARQQGLLFAVPAALWAAAIAGR
                     SKRARLLAAVAFLVIPFAANRLMDFYAAQSRANPQVDAVSTGWRILVQFDIAGILARK
                     GGLPADTPPALVDEFRRQALRYSPFRVDTLDSSAPAFWALDVTGASRLWRSAIVASPV
                     PYLRHRAAHFATLLGLSDMHACLPVYTGTAGPVVHPGVDGDLTALLGLSTAVRSVSYR
                     VRDFGQEQAGTPLFMHFAYAVVLVLVAVCLFVRREPVLLTLAVCALLYLASYSVVGIA
                     CDFRYAYALTVTATLLLAYACLNCGTSRKDRGEPFGARGS"
BASE COUNT          390 a          667 c          756 g          252 t
ORIGIN      
        1 cagcgtgttc aggcggaaga gcacgtcggt ctcgaagaag tagccccggc tgagcttcgc
       61 gagcggaagg cgtcgcagca cgctcgcgtg gatcgccgtg taaccgttcg tcgggtcgac
      121 gatattccag tagccggtgg agagcttcga cacgatggag aggatcgcat tgccccacag
      181 acggacggac ggcatcgacg agaggccgtc gaggtcgaag aaacgattgc ccttggcata
      241 gtcggcttcg ccggcgagca aaggggcgac gaaggacggc aggagctccg gcgccatctg
      301 accgtcgccg tcgagtttga cgacgatggt cgccccgtcc tgcagggcct ggcggtagcc
      361 cgtcatgacg gcgccgccca ccccctcgtt cgacgcgtgc cggatgacgc gaacgcgcgg
      421 gtcgcggcaa ccgtcggaca cccgctgtcc cgagtgctcc ggacaggcgt cgtcgacgac
      481 atagatgaac gcgcattccg gcccgatccg ccggacgacg tcgacgacgc tgcgagacac
      541 gcggtagctc gggaccacca ccgcgatccg ggccgcgtcc tcgaccggcg ccgagccggc
      601 gccccgatcg gcgagcggtc ggccggcgac ggacactggc atgtcaaggg acacggcgtg
      661 agcggtgagt tcgcatgccg gcggcgcagc gtacgcgcgc ggcggccggt cgtccatcgg
      721 cggagtttac gcgatcctgt gttccgcgcc gatgcgcgcc ggccgctacg atccgcgcgc
      781 cccgaagggc tcgccccgat ccttgcgcga cgtcccgcag ttgaggcatg cataggcgag
      841 gagcagcgtc gcggtcacgg tcagcgcata ggcgtaccgg aagtcgcacg cgatgcccac
      901 gaccgaatag cttgcgaggt agagaagtgc gcagacggcc agcgtcagca gcacgggctc
      961 ccgccgcacg aagaggcaga ccgcgacgag cacgagcacg accgcgtacg caaagtgcat
     1021 gaacaggggc gtgcccgcct gctcctggcc gaagtcccgg acccgatagg acacactcct
     1081 gacggcggtg gacaggccga ggagcgcggt gagatcgccg tcgacgcccg gatgaacgac
     1141 gggccccgcc gtgccggtgt acaccggaag acaggcgtgc atgtcggaga gtccgagcag
     1201 cgtcgcgaag tgcgcggcgc ggtgccgcag gtacgggacc gggctcgcga caatcgccga
     1261 acgccagagc cggctcgcgc ccgtgacgtc tagcgcccag aacgccggcg ccgagctgtc
     1321 gagggtgtcg acgcggaagg ggctgtagcg cagcgcctgc cggcgaaact cgtcgacgag
     1381 ggccggcggc gtgtcggccg gcagtccgcc tttgcgggcg aggatgcccg cgatgtcgaa
     1441 ttgcaccagg atgcgccacc ccgtcgatac tgcgtctacc tgcggattgg cgcggctctg
     1501 ggcggcgtag aaatccatca gccggttggc cgcgaaggga atgaccagga acgcgacggc
     1561 ggcgagcagc cgagcgcgct tcgaccgccc ggcgatcgcg gcggcccaga gtgccgccgg
     1621 aacggcgaag agcagcccct gctgccgcgc accgacgatg accgtgagga ggagcagggc
     1681 gagggccgcg agcggcggcg tcatcggctt ccctcggtga tggagcgacg cgaggagcag
     1741 ataggtcaat acgacggcgt gcgcgagcag gacgtccttc cagacgatac cgacatagat
     1801 caggaccacg ggattgagca ggacgacggc ggcaaggcag aagcgcggca cggtgatccg
     1861 acccgactgc gagaacacga gccaggacga cgcggaaagc atggcctggg agagcacgac
     1921 gaacccgacg ggcgcgttgc cgaggcgatc cagtacgccc agcagcaacg acatcagcgg
     1981 cggattgaac gaaatgaagt ggagcgtcct gccctcgtag agctggatga tcgaatccac
     2041 gctcagctgg ccaggcaggc cgagg
//
LOCUS       DASSYW010000536         2010 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1109869, whole genome shotgun sequence.
ACCESSION   DASSYW010000536 DASSYW010000000
VERSION     DASSYW010000536.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2010)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2010)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2010
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1109869"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1185)
                     /locus_tag="VFN38_08540"
     CDS             complement(<1..1185)
                     /locus_tag="VFN38_08540"
                     /inference="COORDINATES: protein motif:HMM:NF012876.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase dimerization/phospho-acceptor
                     domain-containing protein"
                     /protein_id="HET9011850.1"
                     /translation="MRLTQRLLIGSLLIIATLVTLVVAIIDGRLRTRLYEESAAEVLR
                     EARLVAAQWRPGLAVDSLANAAGAALGHRVTLIDSTGKVLGDSEFDPPELDELQNHLT
                     RPEVQSALRSGTGVSRRVSASAGDEELYAAVRSGSGFARVSVSAVSIQQLFARARRDV
                     IVAAALALALAFVLVWAFSRSVARPVVELRDVARALAAGDLQRRPSLAAPGEVGDLAS
                     AIHRLAEQLSSRLEALEAEEVRLAALTESLNEGVIAIDARQQVSQLNAQARYLLGLRD
                     SVPFPVSNLPRERGLREAIGTALSGQAVDAHEVQIGGRELSLTARPLAAGGAVIALFD
                     LTPVRRLETVRRDFVANASHELRTPLTVIGGFAETLLDDSLPNEQRQQFARTVLANTQ
                     RMQ"
     gene            complement(1229..1951)
                     /locus_tag="VFN38_08545"
     CDS             complement(1229..1951)
                     /locus_tag="VFN38_08545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HET9011851.1"
                     /translation="MTHATAGGERLLVVDDEPDIAALVTFHLIKAGYRVSTASNGPDA
                     IAQARQEHPVLIVLDLMLPGMSGYEVLEQLRADDSTRDVAVLMLTARKEEQDRIRGLS
                     LGADDYLTKPFSPQELVLRVGAILRRVAQAPQPSADVLRVGALQIDRGAHRVAVDGQD
                     VELTPTEYRLLVTLAERRGRVQARGHLLETVWEAAPDIQTRTVDMHVQRLRTKLGAAG
                     DLIETVRGFGYRLRAAGQSRSA"
BASE COUNT          303 a          722 c          697 g          288 t
ORIGIN      
        1 ctgcatgcgc tgcgtgttgg cgagcacggt gcgggcgaac tgctggcgct gctcgttagg
       61 cagcgagtcg tccagcagcg tctcggcgaa cccgccgatc actgtgagcg gcgtcctgag
      121 ctcgtgcgat gcgttcgcga cgaagtcccg gcgcaccgtc tcgaggcggc gcacgggggt
      181 gagatcgaac agcgcgatga ccgcgccacc cgcggcgagc ggcctcgctg tcagcgagag
      241 ctcccgcccg ccgatctgga cctcatgcgc gtcgacagcc tgccccgaga gggcagtgcc
      301 gatcgcctcg cgcaggccgc gctccctcgg caggttcgaa acggggaagg gcaccgagtc
      361 cctgaggccg agcagatacc gcgcctgcgc attcagctgc gacacctgct gccgcgcatc
      421 gatggcgatc actccttcgt tcagcgactc ggtgagcgcg gcgagccgca cctcttcggc
      481 ctcgagtgcc tcgaggcggc tgctcaactg ttcggcgagg cggtggatgg cgctcgcgag
      541 gtcgccgact tcgccgggcg ccgcgagcga cggacgccgc tgcaggtcgc cggccgccag
      601 cgcacgggcg acatcgcgca gctccacgac agggcgcgcg accgatcgcg agaacgccca
      661 cacgagcacg aacgccagcg cgagcgcgag cgccgcggcc acgatcacgt ctcgccgtgc
      721 ccgcgcgaac agctgctgaa tcgacaccgc gctgaccgac acccgcgcga acccgctccc
      781 agaccggaca gcggcataga gctcctcgtc gccggcggaa gcactgacgc ggcgagagac
      841 gccggtgccg ctccgaagcg cgctctggac ctcgggccgc gttaggtggt tctgcagctc
      901 atccagctcc ggcggatcga actccgagtc gccgagcacc ttgccggtcg aatcgatgag
      961 cgtgacgcgg tgcccgagtg ccgcgccggc ggcgttggcc agcgagtcca cggcgagtcc
     1021 cggccgccac tgcgccgcga cgagccgcgc ctcacggagc acctcggccg cgctctcctc
     1081 gtagaggcga gtgcgaagcc ggccgtcgat gatcgcgacg acgagcgtca cgagcgtcgc
     1141 gatgatcaac agcgatccga tgaggagccg ctgtgtgagc ctcaccggtt cgatccccgg
     1201 tggccgtcaa ccacgcgggg atcggtcgtc acgcactgcg tgactggccg gcggcgcgca
     1261 gccgatagcc gaaaccgcgc acggtctcga tcagatcgcc cgccgcgccg agcttcgtcc
     1321 gcaaccgctg cacgtgcatg tcgaccgtgc gcgtctggat gtcgggtgcc gcttcccata
     1381 cggtctcgag caagtggcca cgcgcctgca cgcgtccgcg ccgctcggcg agcgtcacga
     1441 gcaggcggta ctcggtgggc gtaagctcga cgtcctgccc atccaccgca acgcgatgcg
     1501 cgccgcggtc gatctgcagc gcgcccacgc gcagcacgtc ggccgacggc tgcggcgcct
     1561 gtgccacgcg cctgagaatc gcgccgacgc gcagcacgag ctcctgcggg ctgaacggct
     1621 tggtgaggta gtcgtccgcg ccgagcgaga ggccgcgaat tcgatcctgc tcttccttcc
     1681 gcgcggtcag catcagcacg gcgacgtcgc gcgtggagtc gtcggcgcga agctgctcga
     1741 gcacttcgta tcccgacatg cccggcagca tgaggtcgag cacgatgagc accggatgct
     1801 cctggcgcgc ctgcgcgatc gcgtcgggtc cgttcgacgc cgtcgacacg cggtagccgg
     1861 ccttgatgag atggaacgtg acgagggcgg cgatgtcggg ctcgtcgtcc acgacgagca
     1921 gtcgctcgcc tcccgcggtc gcgtgcgtca cgcggtccgt cctctcaacc gggtctggat
     1981 cttcgcgacg atcatctcga tggcgatggt
//
LOCUS       DASSYW010000537         2878 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_420743, whole genome shotgun sequence.
ACCESSION   DASSYW010000537 DASSYW010000000
VERSION     DASSYW010000537.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2878)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2878)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2878
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_420743"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2003)
                     /locus_tag="VFN38_08550"
     CDS             complement(<1..2003)
                     /locus_tag="VFN38_08550"
                     /inference="COORDINATES: protein motif:HMM:NF015155.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MMPL family transporter"
                     /protein_id="HET9011852.1"
                     /translation="MRRPVAVLVGAFLIGGVATALASQLKLKTAFSELLPSNDPGVVA
                     LTRTQKRLGDLSLLLIGIRSPDRDANLRYAEALTQKLHQLPPTVVNLATYHVRDVRAF
                     FEQNKWLYVSEEDLESIRDRLRSEISKRKNPLYVSLGEDEPIDSMRQRMEGKHGLDDR
                     FPGGVFTSQGAGGEYVWIAALPPGGLFVENAGEALLNAANELIKADPPARYHPDMKVE
                     PAGPIVTGIASRHAIERDIVSVTIFCIVVVAASIGLYFRRWRAIPLTGVPAAMGSVMA
                     FAVAELAFGYLNSSTAFLGSIIIGNGINYAIVLMSRYEEHRARGDEPEEALRCALGGT
                     WRGTLVASIAASAAYASLMVTSFRGFYQFGVMGATGAIFCWLATYSVLPAMLTLLDRR
                     ASAAGRQRAHAPLEFGFLATFLRRHAAAVSVSFAALGVLSVVGMRHFLSDPFEYDFRK
                     LNAKLETTDDAKKFSKNLNDMFGRWPSPTILLADAVDEVEPMKAAIRRQDKATPDKAE
                     VGQIVTIFDLLPGAPEVQRRKLDILAQIRKLTHDPALVVLNEQEKADLAKIDPSPELR
                     ELTPMDLPAIARRPFTEVDGSVGKVVLVYPPEEGISVWNGRDLLRIASVLQEIKLDNG
                     KVIETSGFAVVFGAMIRSVLHDGPIATVASLVAVMIIIIFTIRP"
     gene            complement(2174..>2878)
                     /locus_tag="VFN38_08555"
     CDS             complement(2174..>2878)
                     /locus_tag="VFN38_08555"
                     /inference="COORDINATES: protein motif:HMM:NF026018.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis C-terminal
                     domain-containing protein"
                     /protein_id="HET9011853.1"
                     /translation="AAEFITRVIANPRYLFDYIIAPVVSEALHMQDRARVRYNLALAT
                     RWVITACTPIAVTVIVLRAEILGLYGATFVAGTGPLIILAITNLIVGGLGLTPYALAM
                     GGRSRLFLINNLCAAAVNILLGLVLVPRMGLMGAAIAVLVSTGGFQVALTIETWMLER
                     VHPFTMSLVKPAAAALVAFAVEYALRAGLHAGPARVTAVITGGAVSYLAALLLLGLAP
                     EERDVVRKLVGRFRRR"
BASE COUNT          489 a          993 c          962 g          434 t
ORIGIN      
        1 gggcggatcg tgaagatgat gatgatcatg acggcgacca gcgacgcgac cgtggcgatc
       61 gggccgtcgt gaaggaccga tctgatcatc gccccgaaca ccaccgcgaa gcccgaggtc
      121 tcgatcacct tgccgttgtc gagcttgatc tcctggagca ccgaggcgat gcggagcaga
      181 tcgcgcccgt tccagacgga gatgccctcc tccggcgggt agaccagcac caccttgccg
      241 accgagccgt cgacctcggt gaagggacgc cgggcgatcg ccggcagatc catcggcgtc
      301 agctcgcgca gctcgggcga cggatcgatc ttcgccagat ccgccttctc ctgctcgttc
      361 agcacgacca gcgcggggtc gtgggtcagc ttgcggatct gcgccaggat atcgagcttg
      421 cgccgctgca cctcgggcgc ccccggcagc aggtcgaaga tcgtcacgat ctggccgacc
      481 tcggccttgt cgggggtggc cttgtcctgg cgccggatcg ccgccttcat cggctcgacc
      541 tcgtccaccg cgtcggcgag caggatcgtc ggcgagggcc agcggccgaa catgtcgttg
      601 aggttcttgc tgaacttctt cgcgtcgtcc gtcgtctcca gcttggcgtt cagcttgcgg
      661 aagtcgtact cgaacgggtc actgaggaag tgccgcatgc cgacgacgct gagcaccccg
      721 agcgccgcga aggacacgct gacggcggcg gcgtgccgcc gcaggaacgt cgccaggaag
      781 ccgaactcca gcggcgcgtg cgcgcgctgc cggcccgccg cgctggcgcg acggtccagc
      841 agcgtcaaca tcgcgggcag caccgaatag gtagccagcc agcagaagat cgcgcccgtc
      901 gcgcccatca ccccgaactg gtagaagccg cggaagctgg tcaccatcag tgacgcgtac
      961 gcggccgacg ccgcgatcga cgccaccagc gttccccgcc aggtgccgcc cagcgcgcag
     1021 cgcagcgctt cttccggttc gtcgccgcgg gcgcggtgct cctcgtagcg cgacatcaac
     1081 acgatcgcgt agttgatgcc gttgccgatg atgatcgacc ccaggaacgc cgtcgacgag
     1141 ttcaggtagc cgaacgccag ctctgcgacc gcgaacgcca tcaccgaccc catcgcggcc
     1201 gggacgccgg tcagggggat ggcgcgccag cgacggaaat agagaccgat cgacgccgcc
     1261 accaccacga tgcagaagat cgtgaccgac acgatgtcgc gctcgattgc gtgccggctc
     1321 gcgatgccgg tgacgatcgg gcccgccggc tcgaccttca tgtccgggtg ataccgcgca
     1381 ggcgggtcgg ccttgatgag ctcgttggcc gcgttcagca gcgcctcgcc cgcgttctcg
     1441 acgaacagcc cgcccggcgg cagcgccgcg atccagacgt actctccccc cgcgccctgg
     1501 ctggtgaaca caccgcccgg gaagcgatcg tccaggccgt gcttcccttc catgcgctgg
     1561 cgcatggagt cgatcggctc gtcctcgccc agcgacacgt acagcggatt ctttcgcttg
     1621 ctgatctcgc tgcgcagccg atcacggatc gattccagat cctcctcgga gacgtagagc
     1681 cacttgttct gctcgaagaa ggcgcgcacg tcgcgcacgt ggtacgtcgc caggttgacg
     1741 acggtgggtg gcaactggtg aagcttctgc gtcagcgcct ccgcgtagcg aaggttggcg
     1801 tcgcggtcgg gcgagcggat gccgatcagc agcagcgaca gatcacccag ccgcttctgc
     1861 gtgcgcgtca gagcgaccac gcctgggtcg ttgctgggaa gcagctcgga gaacgccgtc
     1921 ttcagcttca gctgagaggc gagcgcggtc gcgacgccgc cgatcaagaa ggcgcccacc
     1981 aagaccgcga cgggacggcg cacgagccag ccgtggtaac ggctgatccg gctgtggctc
     2041 ggggggacca tgcggccctt taacgtaaca gggaatccgt cggtggtggg cgtcgatcgt
     2101 gggccccggt gtcgaagtgt caaatattca acagggccga gcttcgattc accagctgcg
     2161 cgtgagcagg tcgtcagcgc cgccggaaac gtcccaccag ttttcgcacc acgtcccgct
     2221 cctcgggcgc gaggcccagc agcaacagcg ccgccaagta actgacggcg ccgcccgtga
     2281 tcaccgccgt gacgcgcgcc gggccggcgt gcaggccggc gcgcaacgcg tattcgaccg
     2341 cgaaggccac cagcgccgcc gccgcgggtt tcaccagcga catcgtgaac gggtgcacgc
     2401 gctcgagcat ccaggtctcg atcgtcagcg ccacctggaa gcctcccgtg ctgaccagga
     2461 cggcgatggc ggcccccatg aggcccatgc gcggaaccag caccagtccc agcaggatgt
     2521 tcaccgccgc cgcgcacagg ttgttgatca ggaacaggcg cgagcggccg cccatcgcga
     2581 gcgcgtaggg cgtcaggccc agcccgccga cgatcagatt ggtaatcgcg aggatgatca
     2641 gcggccctgt cccggccacg aacgtcgcgc cgtaaagccc caggatctcc gcccgcagta
     2701 cgatcaccgt gacggcgatg ggcgtgcacg cggtgatcac ccagcgggtc gccagcgcca
     2761 ggttgtagcg gacgcgcgcg cggtcctgca tgtgcagcgc ctccgagacc acgggcgcga
     2821 tgatgtagtc gaacaggtag cgcgggttgg cgatgacgcg tgtgatgaac tcggcggc
//
LOCUS       DASSYW010000538         2192 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1714180, whole genome shotgun sequence.
ACCESSION   DASSYW010000538 DASSYW010000000
VERSION     DASSYW010000538.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2192)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2192)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2192
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1714180"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1397
                     /locus_tag="VFN38_08560"
     CDS             <1..1397
                     /locus_tag="VFN38_08560"
                     /inference="COORDINATES: protein motif:HMM:NF036516.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011854.1"
                     /translation="LPVWSPGRYAKMDFAKNIQDFRATDAAGVPLPWTKTDGARWVVT
                     TGGRPARIRYRSFDNALSGTFSVLDTAHANWNGASLFMYVEGRKPAPVTLAITPPAGW
                     RVMNGDTRTAGQIEYRFENYDRLIDTPTEVAPALMVDSFVVDGAKYRTMVHHNGPAPA
                     GVRERFVRDVEKIVRYENRVFSVPPLDQYTFLFHIGYAGGDGMEHLYSTQVIDRRAWA
                     DSFAVLPGLGTAAHEYFHVWNVKRVRPAALGPFDYTREQYQPSLWVAEGWTQYYGIAA
                     LHRAGVTDLPQFYGAMAGVIRQNLTAPGRKEVSPRMASFHAPFWDGAVQQQPTNGSNT
                     FFSYYTAGAGRALYLDLHLRALSANRRSLDDVFNALKRRTWNAPNASYYLQGRGYTEL
                     DVERAATEVAGEDMHQWFERFVGGTEDPDYDALLARAGLRLVRGDQWRIEEVPDATPA
                     QRAIRDGWTSGRRS"
     gene            complement(1407..>2192)
                     /locus_tag="VFN38_08565"
     CDS             complement(1407..>2192)
                     /locus_tag="VFN38_08565"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HET9011855.1"
                     /translation="LLLWARHRDGSRWPSGRDWATALVSGALLLLGGNGAVVWAEQRV
                     PSGITALLVAVVPVWMVMLDWLRPGGRRPAPLVFAGLGLGLVGLGLLVGPDALRGGGE
                     IDVVGASVLLLGSLSWAVGSLFTQRAPRPSSANSGSGAQMIAGGICLVLVALGSGEAA
                     QLDLAHATARSLLGFAYLVTFGSLIGFTAYYYLLSHTTAAKAATYAYVNPVVAVLLGW
                     AFANEPVTSRTLVAAAVILAGVAIITVARDPGVSVPDEQRAAA"
BASE COUNT          350 a          820 c          750 g          272 t
ORIGIN      
        1 agctccccgt ctggtcgccc ggccgctacg ccaagatgga cttcgccaag aacatccagg
       61 acttccgggc gacggacgcg gcgggggtcc cgctgccgtg gacgaagacc gacggcgccc
      121 gctgggtcgt gaccaccggc ggccggccgg cgcgcatccg ctaccggtcg ttcgacaacg
      181 cgctgtccgg gaccttcagc gtcctcgata cggcgcacgc gaactggaac ggcgcgtcgc
      241 tcttcatgta cgtcgagggg cgcaagccgg caccggtgac gctcgccatc acaccccccg
      301 ctggctggcg cgtcatgaat ggcgacacgc gcaccgccgg ccagatcgag taccggttcg
      361 agaactacga tcggctcatc gacacgccca ccgaggtggc cccggcgctg atggtcgatt
      421 cgttcgtcgt ggacggggcg aagtatcgca cgatggtgca tcacaacgga ccggcccccg
      481 ccggcgtgcg cgagcgcttc gtgcgcgacg tcgagaagat cgtgcgctac gagaaccgcg
      541 tcttctccgt gccgccgctg gaccagtaca cgttcctgtt ccacatcggc tacgccggcg
      601 gcgacgggat ggagcatctc tactccaccc aggtgatcga ccggcgcgcg tgggccgaca
      661 gcttcgccgt gctccccggg ctcggcacgg ccgcgcacga gtacttccac gtgtggaacg
      721 tgaagcgcgt gcgccccgcg gcgctcggcc cgttcgacta cacccgcgag cagtaccagc
      781 ccagcctctg ggtcgcggaa ggctggacgc agtactacgg gatcgccgcc ctccaccggg
      841 ccggcgtgac ggatctgccc cagttctacg gcgcgatggc cggcgtgatc cgccagaacc
      901 tcaccgcccc ggggcgcaag gaggtctcgc cccgcatggc gtcgtttcac gcgccgttct
      961 gggacggtgc ggtgcagcag cagccgacga acggctccaa caccttcttc agctactaca
     1021 ccgccggcgc ggggcgcgcg ctctacctcg acctccacct ccgcgcgctg tcggcgaacc
     1081 gccgctcgct cgacgacgtg ttcaacgcgc tgaagcggcg cacctggaac gcgccgaacg
     1141 cgtcgtacta cctgcaggga cgcggctaca cggagctcga cgtcgagcgc gccgccaccg
     1201 aggtggccgg cgaggacatg caccagtggt tcgagcgctt cgtcggcggg accgaggatc
     1261 cggactacga cgcgctgctc gcacgggccg gtctgcgcct cgtgcggggc gaccagtggc
     1321 ggatcgagga ggtcccggac gccacgccgg cccagcgcgc catccgcgac gggtggacgt
     1381 cggggcgacg gagctgacgg aagccgtcag gccgccgcgc gctgctcgtc gggaacgctg
     1441 acccccgggt cgcgcgccac ggtgatgatc gccacgccgg cgaggatcac cgcggccgcg
     1501 accagcgtgc gcgacgtcac cggctcgttc gcgaacgccc agccgagcag caccgccacc
     1561 accgggttca cgtaggcgta ggtcgccgcc ttcgccgccg tggtgtgcga cagcaggtag
     1621 tagtaggcgg tgaacccgat caacgagccg aacgtcacga ggtacgcgaa gccgagcagc
     1681 gagcgcgccg tggcgtgcgc caggtcgagc tgcgccgcct cgccgctccc gagcgccacg
     1741 agcaccaggc agatcccgcc ggcgatcatt tgcgcgccgg atccgctgtt cgccgagctc
     1801 ggacgtggcg cgcgctgggt gaacagcgat cccaccgccc acgacagcga gccgaggagg
     1861 agcaccgacg cccccacgac gtcgatctct ccgccgccgc gcagcgcgtc ggggcccacc
     1921 aggaggccaa gaccgaccag gccgaggccc agcccggcga agacgagcgg tgcggggcgc
     1981 cgtccgccag gacggagcca gtccagcatc accatccaca ccggcaccac ggcgacgagc
     2041 agcgccgtga tccccgaggg aacgcgctgc tcggcccata cgaccgcccc gttgcccccg
     2101 agcagcagga gggccccgct caccagcgcc gtggcccagt cgcgccctga gggccagcgc
     2161 gacccatcac gatggcgtgc ccagagcagg ag
//
LOCUS       DASSYW010000539         2518 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_631486, whole genome shotgun sequence.
ACCESSION   DASSYW010000539 DASSYW010000000
VERSION     DASSYW010000539.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2518)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2518)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2518
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_631486"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1028
                     /locus_tag="VFN38_08570"
     CDS             <1..1028
                     /locus_tag="VFN38_08570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HET9011856.1"
                     /translation="RPDDSGVSPLARHDEWYHTPCPQCGARARRETDVSDTFLDSAWY
                     FLRYPSTDRDDVPFDRALTSRWLPVHSYIGGNEHAVLHLLYSRFVTMVLHDAGLVDFE
                     EPFTRFRAHGLIVREGAKMSKSKGNVVNPDQYIDEWGADAFRTYLMFLGPFEEGGDFR
                     DKGISGVKRFLDRLWRSVHDAERGRPADPEVLRKLHQTIRKVGDDVARLSYNTAIASM
                     MEYMNTMRAGERTPRLDEVRPLVQLVSPFAPHVAEELWSVMGGTTSVFDAGWPAFDPA
                     LVADERVTMAVQMGGKTRGTISVPRTASQDDAMAAVLADPALAKFLTGTPKRIVFVPG
                     RLVNVIV"
     gene            complement(1154..1699)
                     /locus_tag="VFN38_08575"
     CDS             complement(1154..1699)
                     /locus_tag="VFN38_08575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011857.1"
                     /translation="MRIPTLSLVLALGVALTAPAAAQVSGPGSVPVGNMYTPIFGGTA
                     GIAIPIGRLADDHAAGYTLGGLVEYGVTNQPYALRGELTYQRFSLKSGRTVGDDVNLW
                     SLGSTIVYKMQQSPMNTFVTGGNAIYTGTGLGTRPGANVGTGIEIPLTGFSATGEARL
                     HLMLADGRPVITLPLTVGVRF"
     gene            complement(1747..>2518)
                     /locus_tag="VFN38_08580"
     CDS             complement(1747..>2518)
                     /locus_tag="VFN38_08580"
                     /inference="COORDINATES: protein motif:HMM:NF014090.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="VIT1/CCC1 transporter family protein"
                     /protein_id="HET9011858.1"
                     /translation="DEALTLAKESAEHATTLNTIAGRTGEPWHRTGAGGFLRNVVYGF
                     NDGLTANFGLVAGVLGATATTSETYHHVIVAGIAGLIADALSMGSSGYLAAQSEREVH
                     AHEIAMERDEIALMPEIERDELALIYEAKGMDRDSAHRIATQVMADPEKMLAEQVQEE
                     LGISESATSPMREAWITGLATAIGALIPVLPFFMFSGPTAVIVSFAVSMLSHWLVGAA
                     RSVFTGRSVFRSGLDMFVVGLGVAVVGYYVGEWVGTLL"
BASE COUNT          402 a          835 c          909 g          372 t
ORIGIN      
        1 tccgcccgga cgattccggc gtgagcccgc tcgcgcggca cgacgagtgg tatcacacgc
       61 cctgcccgca gtgcggcgcg cgggcgcgcc gcgagacgga cgtgagcgac accttcctcg
      121 acagcgcgtg gtacttcctg cgctatccga gcacggaccg cgacgacgtg ccgttcgacc
      181 gcgcgctcac gtcgcggtgg ctcccggtgc acagctacat cggcgggaac gagcacgccg
      241 tgctgcacct gctgtactcg cgcttcgtga cgatggtgct gcacgacgcg gggctcgtgg
      301 acttcgagga gccgttcacc cgcttccgcg cccacgggct gatcgtgcgc gagggggcga
      361 agatgtcgaa gagcaagggg aacgtcgtga atcccgacca gtacatcgac gagtggggcg
      421 cggacgcttt ccgcacctac ctgatgttcc tggggccgtt cgaggagggg ggcgacttcc
      481 gggacaaggg aatctcgggg gtgaagcgct tcctcgaccg gctctggcgg tcggtgcacg
      541 acgccgagcg cgggcgcccc gccgacccgg aggtgctgcg caagctgcac cagacgatcc
      601 gcaaggtggg cgacgacgtc gcgcggctca gctacaacac cgcgatcgcg tcgatgatgg
      661 agtacatgaa cacgatgcgc gccggcgagc gcacgccgcg gctggacgag gtgcgcccgc
      721 ttgtgcagct cgtgagcccg ttcgcgccac acgtcgccga ggagctctgg tcggtgatgg
      781 gcggcacgac gagcgtgttc gacgccggct ggccggcgtt cgaccccgcg ctcgtggccg
      841 acgagcgggt gacgatggcc gtgcagatgg gcggcaagac ccgcggcacg atctcggtgc
      901 cgcggaccgc cagtcaggac gacgcgatgg cggcggtgct ggccgatccg gcgctggcga
      961 agttcctcac cgggacgccg aagcggatcg tgttcgtgcc ggggcggctg gtgaacgtga
     1021 tcgtgtagac ggtcaacggt gaacggtgaa cggtgaacgg tgatcggtaa ccatgaaggg
     1081 cacaccagcc tcaagccggt gtgcccttcc tgctgctacc gttcaccgat caccgcgaac
     1141 cgtcttcccc cctctagaac ctcactccca ccgtcagcgg cagcgtgatc accgggcggc
     1201 cgtcggcgag catgaggtgc aggcgcgcct cgcccgtggc ggagaagccg gtgagcggga
     1261 tctcgatgcc ggtgccgacg ttcgcgcccg gccgcgtgcc gaggcccgtg ccggtgtaga
     1321 tcgcgttgcc gccggtgacg aaggtgttca tcggcgactg ctgcatcttg tacacgatcg
     1381 tcgagccgag cgaccagagg ttcacgtcgt cgccgacggt gcggccggac ttgagcgaga
     1441 agcgctgata ggtgagctct ccgcgcagcg cgtacggctg gttggtgacg ccgtattcca
     1501 cgaggccgcc gagcgtgtag ccggcggcgt ggtcgtcggc gaggcgcccg atggggatgg
     1561 cgatccccgc ggtgccgccg aagatcggcg tatacatgtt gccgaccggg acgctgccgg
     1621 ggccggagac ctgggcggcg gccggcgccg tgagcgccac gccgagcgcg agaacgagag
     1681 aaagagttgg gatacgcatg cgacgaaggt tagcgcgggc catcggggcg ggcaacgcga
     1741 cgtggatcac aataacgtgc ccacccactc gccgacgtag taccccacga cggcgacgcc
     1801 gagaccgacg acgaacatgt cgagccccga gcggaacacg ctgcgtccgg tgaacacgga
     1861 gcgcgccgcg cccacgagcc agtgcgacag catcgacacg gcgaacgaca cgatcaccgc
     1921 cgtcggaccc gagaacatga agaaggggag caccgggatg agcgcgccga tcgccgtcgc
     1981 gagcccggtg atccatgcct cgcgcatcgg cgacgtggcc gactcgctga tgcccagctc
     2041 ctcctggacc tgctcggcga gcatcttctc gggatcggcc atcacctgcg tcgcgatgcg
     2101 atgcgccgag tcgcggtcca tccccttggc ctcgtagatc agcgcgagct cgtcgcgctc
     2161 gatctccggc atcagggcga tctcgtcgcg ctccatcgca atctcgtgcg cgtgcacctc
     2221 gcgctcgctc tgtgcagcga gatacccgct ggagcccatc gagagcgcgt cggcgatgag
     2281 gccggcgatg ccggcgacga tgacgtgatg gtacgtctcc gacgtggtgg ccgtggcgcc
     2341 gagcacgccg gcgacgaggc cgaagttggc ggtgagcccg tcgttgaagc cgtacacgac
     2401 gttgcgcagg aagccgccag cgccggtacg gtgccacggt tccccggtgc gcccggcgat
     2461 ggtgttgagc gtcgtggcgt gctccgccga ctccttcgcg agtgtcagcg cctcgtcg
//
LOCUS       DASSYW010000540         2376 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_666596, whole genome shotgun sequence.
ACCESSION   DASSYW010000540 DASSYW010000000
VERSION     DASSYW010000540.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2376)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2376)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2376
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_666596"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1316
                     /gene="lon"
                     /locus_tag="VFN38_08585"
     CDS             <1..1316
                     /gene="lon"
                     /locus_tag="VFN38_08585"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: protein motif:HMM:TIGR00763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HET9011859.1"
                     /translation="SLAKSIARAMNRKFVRLSLGGVRDEAEIRGHRRTYIGAFPGQII
                     QMMKKAGTQNPVFLLDEVDKMSMDFRGDPSAALLEVLDPEQNNAFLDHYLDVEYDLSS
                     VMFICTANVLHTIPQALRDRMEVLQLAGYTEQEKIEIARKFLSPKAIEGAGLTPANVT
                     FLPEAFSTIVQRYTREAGVRNLEREISSICRKIARKVVVEGKHFSEEITAEKVTEYLG
                     VPRYRPTVAEAENEVGIATGLAWTEVGGEILMAEATLMPGKGHLRLTGKLGDVMQESA
                     HAAMSYVRSKSDEFGIPKDFNRKTDVHVHIPEGAIPKDGPSAGITLATALISAIARVP
                     TRRDVAMTGEITLRGKVLPIGGVKEKVLAAHRAGLKTIVLPKDNEKDLADIPKNVLDT
                     LDVYMVETMDEVLKVALAGPLPALAAPAPAEAEVQPAISDDTITH"
     gene            1390..1719
                     /locus_tag="VFN38_08590"
     CDS             1390..1719
                     /locus_tag="VFN38_08590"
                     /inference="COORDINATES: protein motif:HMM:NF014036.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase"
                     /protein_id="HET9011860.1"
                     /translation="MKVLNADFVTSAARADGIPRDDLPHIAMAGRSNVGKSSLINALC
                     RARIARTSAAPGKTRLANFYRVLVEGGRGGPGTWGLYLVDLPGYGYARGGAEAAVELA
                     RVAEDYF"
     gene            1741..1998
                     /locus_tag="VFN38_08595"
     CDS             1741..1998
                     /locus_tag="VFN38_08595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011861.1"
                     /translation="MLLLVDARHPGLQADLDAASWLARMNTAVTLAATKVDKLSRNER
                     HRNLKVLETKFGMPALPISAASGEGMDELWRTIARLARPGQ"
     gene            2085..2141
                     /locus_tag="VFN38_08600"
                     /pseudo
     CDS             2085..2141
                     /locus_tag="VFN38_08600"
                     /inference="COORDINATES: protein motif:HMM:NF019139.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            2145..2376
                     /locus_tag="VFN38_08605"
                     /pseudo
     CDS             2145..2376
                     /locus_tag="VFN38_08605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017492510.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Rho termination factor N-terminal
                     domain-containing protein"
BASE COUNT          441 a          810 c          800 g          325 t
ORIGIN      
        1 cgtcgctcgc caagtcgatc gcgcgcgcga tgaaccgcaa gttcgtgcgc ctgtcgctcg
       61 gcggcgtgcg cgacgaggcc gagatccgcg gccaccgccg cacctacatc ggcgccttcc
      121 ccggccagat catccagatg atgaagaagg cggggacgca gaacccggtg ttcctgctcg
      181 acgaagtcga caagatgtcg atggacttcc gcggcgaccc gtcggccgcg ctcctcgagg
      241 tcctcgaccc cgagcagaac aacgcgtttc tcgaccacta tctcgacgtc gagtacgacc
      301 tgtcgagcgt gatgttcatc tgcacggcga acgtgctgca cacgatcccg caggcgctgc
      361 gcgaccgcat ggaggtcctg cagctcgccg gctacaccga gcaggagaag atcgagatcg
      421 cgcgcaagtt cctctcgccg aaggcgatcg agggcgccgg cctgacgccg gccaacgtca
      481 ccttcctgcc cgaggcgttc tcgacgatcg tgcagcgcta cacgcgcgag gcgggcgtcc
      541 gcaacctcga gcgcgagatc tcgtcgatct gccgcaagat cgcgcgcaag gtcgtcgtcg
      601 agggcaagca cttcagcgag gagatcaccg ccgagaaggt caccgagtac ctcggcgtgc
      661 cgcggtaccg cccgaccgtg gccgaggcgg agaacgaggt gggcatcgcc accggcctgg
      721 cgtggacgga ggtcggcggt gagattctga tggcggaagc gacgctgatg ccgggcaagg
      781 ggcacctgcg cctcaccggc aagctcggcg acgtcatgca ggagtcggcg cacgcggcca
      841 tgagctacgt ccgatcgaag tcggacgagt tcggaatccc caaggacttc aaccgcaaga
      901 ccgacgtgca cgtgcacatt ccggaaggcg cgattccgaa ggacggcccg tcggcgggaa
      961 tcacgctcgc gacggcgctg atttcggcga tcgcgcgcgt gccgacgcgc cgcgacgtcg
     1021 ccatgaccgg cgagatcacg ctgcgcggca aggtgttgcc gataggcggc gtgaaggaaa
     1081 aagtcctggc ggcgcaccgc gccggcctga agacgatcgt cctgccgaag gacaacgaga
     1141 aggatctggc ggacatcccc aagaacgtgc tcgacacgct cgacgtctac atggtcgaga
     1201 ccatggacga ggtgttgaag gtcgcgctgg ccgggccgct gccggcgctg gcggccccgg
     1261 cgcctgccga agcggaagtg cagcccgcca tctcggacga caccattacg cactgatccg
     1321 ctgttcgcgg cccgcggcgt gccgcccgga cacccggatg gcgagcggca gaccgcggac
     1381 cgcgacatct tgaaggtact gaacgccgac ttcgtcacga gcgccgcgcg cgccgacggc
     1441 attccgcgcg acgacctgcc gcacatcgcg atggcgggcc gctcgaacgt tggcaagtcg
     1501 agcctgatca acgcgctgtg ccgcgcccgg atcgcccgca ccagcgccgc gcccggcaag
     1561 acgaggctcg ccaacttcta tcgcgtcctc gtggaaggcg gtcgcggcgg gcccggcacg
     1621 tggggcctct acctcgtcga tctgccgggc tacggatacg cccggggcgg agccgaggcc
     1681 gccgtcgaac tggcgcgcgt cgccgaggac tacttctagg gatcgccatc gaccaccgcg
     1741 gtgctcctgc tggtcgacgc gcggcacccg ggactgcagg cggatctcga cgccgcgtcg
     1801 tggctggcgc ggatgaacac ggccgtcaca ctggcggcga cgaaagtcga caagctgtcc
     1861 cgcaacgagc ggcatcgcaa cctgaaagtg ctggaaacga agttcggaat gcccgccctg
     1921 cccatctcgg cagcgagcgg cgaaggaatg gatgaactgt ggagaacgat agcaagactg
     1981 gccagacccg ggcagtgagc gagaagaacc aggatcgcgg cgaggcgaag gccgcgacgg
     2041 cgacggcaga agctcccgcc gtcgagctcg gcacgctcaa ggagatgagc gtcaccgagt
     2101 tgacgaagat cgccaagcag ctcgacgtgc cgggcgccgg cggcatgcgc aaacaggagt
     2161 tgatcttcga gatcctccga tcgcgcgccg agaagagcgg cctgctcttc tccgaaggcg
     2221 tgctcgaaac cctgcccgac ggcttcggct tcctccgcgc tcccgactac aactaccttc
     2281 ccggcccgga cgacatctac gtctcgccgt cgcagatccg caagttcgat ctgcacaccg
     2341 gcgacaccgt ctcgggccag atccggccgc ccaagg
//
LOCUS       DASSYW010000541         3915 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_335473, whole genome shotgun sequence.
ACCESSION   DASSYW010000541 DASSYW010000000
VERSION     DASSYW010000541.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3915)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3915)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3915
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_335473"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..186
                     /locus_tag="VFN38_08610"
     CDS             <1..186
                     /locus_tag="VFN38_08610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011862.1"
                     /translation="VDAREFAEQVKTEGGFWVGRAELMSTHPTLPKRVAALIAAGANV
                     PSYTPVHADAPSWLTSA"
     gene            183..533
                     /locus_tag="VFN38_08615"
     CDS             183..533
                     /locus_tag="VFN38_08615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011863.1"
                     /translation="MIPARWTKPVPGDTGVGPLPPGRLRKLAPRQALQALALIAASFA
                     GGVGLARMLRSLGAPRAGGYLGWLVIATGLGFVIAVYAYRWEPKPAVRRAALGALWLV
                     GVMLAADLIRAALR"
     gene            562..942
                     /locus_tag="VFN38_08620"
     CDS             562..942
                     /locus_tag="VFN38_08620"
                     /inference="COORDINATES: protein motif:HMM:NF017007.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TM2 domain-containing protein"
                     /protein_id="HET9011864.1"
                     /translation="MTHSRLTPRVPPTDSTSMPDFAVRPTIQCHACGRAIDAEAVVCT
                     GCGVMQPAAKALDADRKILPVFLLAFLLGPFGAHRFFVGKLGTGLLMLFTLGGLGLWV
                     LVDLVLIITGNFSDKEGNRITEWT"
     gene            complement(961..2184)
                     /locus_tag="VFN38_08625"
     CDS             complement(961..2184)
                     /locus_tag="VFN38_08625"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0031071 - cysteine desulfurase activity
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SufS family cysteine desulfurase"
                     /protein_id="HET9011865.1"
                     /translation="MTTSRRGDFPLLAANPGLHYLDSAATSQKPRAVLDAIRHYYEHD
                     NANPHRGAYDLSARATERYHGARERIARFMGVADADCLLFTRGTTEALNLVATAWGPA
                     NVAAGDEIVVTGLEHHANFVPWQQLALARGARFLVCPLTTDQHVDLAALRAMVGPRTK
                     VVAFNHVSNALGTVNDVRAIAAIARGAGALAVCDGAQAAPHLRVAFDSLGVDFYAFSG
                     HKMCGPMGIGGLIGRRGILEAMSPYQFGGDMIEFVRDEHSTWNVLPHKFEAGTPNVAD
                     AVGLAAACDYLDAIGMDAVLEHERALVRLATERLQRIDGLRIYGPGAAERSGVVSFTV
                     RDIHPHDLATVLDQDGVCIRAGHHCAQPLMRRLGVSATARASFYLYSDEGDVDALVRS
                     LERAKVLFGAETVGS"
     gene            complement(2181..2525)
                     /locus_tag="VFN38_08630"
     CDS             complement(2181..2525)
                     /locus_tag="VFN38_08630"
                     /inference="COORDINATES: protein motif:HMM:NF025178.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HET9011866.1"
                     /translation="MSDFADVAAAADVPEGELLGVTLPDGVAVCLYNRGGVIGAVGGR
                     CTHAEFAMSDGVLRDDGTIECVWHGARFDCRTGEVRRHPAVDPLPVFPVRVERGRILV
                     GRATAGAGERSA"
     gene            complement(2518..2964)
                     /locus_tag="VFN38_08635"
     CDS             complement(2518..2964)
                     /locus_tag="VFN38_08635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SUF system NifU family Fe-S cluster assembly
                     protein"
                     /protein_id="HET9011867.1"
                     /translation="MSDLQELYQSIILDHNRRPKNYGALEGATTRRQDRNPACGDEIT
                     LELIVEDDVITDVRFTSEGCAVSRASASIMTQAVKGKTRAEAERLFRQFHELVTGKLK
                     PTPQEARGLGEMAAFSGVSRFPIRVKCASMAWHSLHKAISEGSSGE"
     gene            complement(2976..>3915)
                     /gene="sufD"
                     /locus_tag="VFN38_08640"
     CDS             complement(2976..>3915)
                     /gene="sufD"
                     /locus_tag="VFN38_08640"
                     /inference="COORDINATES: protein motif:HMM:TIGR01981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufD"
                     /protein_id="HET9011868.1"
                     /translation="LLEQHVGRITSMDAHTVTALNTAFINDGAVVHVSADVEVARPIH
                     LLFVSDEHAVNGVAQPRNLIVLDRFAKATVIESYVTVARGAGAYFTNAVTEATIGDGA
                     TLTHLKLQRESAQAFHVGTLDVRQARDSHLVSFSFATGAALSRTNIYTELRGDGCGAT
                     LNGLYLGDDEQHIDHQTRIEHVAPNCYSRELYKGILDGASHGVFNGKVFVHPAAQKTD
                     GKQTNNTLLLSERAKIDTKPQLEIFADDVKCTHGATVGRLDETSLFYMKSRGLNARTA
                     RELLTYAFAADVLETIACAEVREGLEAATLRRYAGV"
BASE COUNT          513 a         1398 c         1399 g          605 t
ORIGIN      
        1 gtggatgcgc gcgagttcgc cgagcaggtg aagaccgagg gtggcttctg ggtgggacgc
       61 gcggagctga tgtccacgca tcccacgctg ccgaagcgtg tcgccgcgct catcgcggct
      121 ggcgcgaacg tgccctcgta cacgccggtg cacgcggatg cgccgagctg gctgaccagc
      181 gcgtgatccc cgcacgctgg accaagccgg ttccgggcga caccggcgtc ggacccctcc
      241 cccctggccg gctgcgcaag ctcgccccgc ggcaggcgct ccaggcgctc gcgctgatcg
      301 cagcgtcgtt cgcgggagga gtgggcctgg ccaggatgct ccgcagcctg ggcgccccgc
      361 gcgccggagg ctacctcggg tggctggtga tcgcgacggg gctggggttc gtcatcgcgg
      421 tgtacgcgta tcgatgggag ccgaagcccg ccgtgcgccg cgcggcgctc ggcgcgctct
      481 ggctggtcgg cgtgatgctc gcggccgatc tcatccgggc ggcgctgcgc tgacggtgtc
      541 ggtggcggta cgcccaccgg gatgacacat tcccgcctca ccccgcgcgt cccgcctacc
      601 gacagcacct ccatgcccga cttcgccgtt cgtccgacga tccagtgtca cgcctgcgga
      661 agagccatcg acgcggaggc ggtcgtgtgc accggctgtg gcgtcatgca gccggccgcg
      721 aaggcgctcg acgccgaccg gaagatcctc ccggtgttcc tgctcgcgtt cctgctcggc
      781 ccgttcggcg cccaccgctt cttcgtcggg aagctcggca ccggcctgct catgctcttc
      841 acgctgggcg gcctggggct ctgggtgctc gtcgatctcg tgttgatcat cacgggcaac
      901 ttcagcgaca aggaagggaa ccggatcacg gagtggacct gatccgcccc tggtgacgcg
      961 ctagctcccg accgtttccg cgccgaacag caccttggcc cgctcgagcg agcgcaccag
     1021 cgcgtccacg tcgccctcgt cgctgtacag gtagaacgac gcgcgcgccg tggccgacac
     1081 gcccagccgc cgcatcagcg gctgcgcgca gtggtggccg gcgcggatgc agaccccgtc
     1141 ctgatcgagg accgtcgcga gatcgtgcgg gtggatgtcc cgcaccgtga agctcacgac
     1201 gccgctgcgc tcggccgcgc ccgggccgta gatgcgcagc ccgtcgatcc gctgcagccg
     1261 ctcggtggcc aggcgcacga gggcgcgctc gtgctcgagc accgcgtcca tgccgatcgc
     1321 gtccaggtag tcacaggccg cggcaaggcc cacggcgtcg gcgacgttcg gcgttcccgc
     1381 ctcgaacttg tgcggcagca cgttccaggt ggagtgctcg tcgcgcacga actcgatcat
     1441 gtcgccgccg aactggtagg gcgacatcgc ctcgaggatg ccgcggcggc cgatcaggcc
     1501 accgatcccc atcgggccgc acatcttgtg gccgctgaag gcgtagaagt ccacgccgag
     1561 cgagtcgaac gcgacgcgca ggtggggcgc cgcctgggcg ccgtcgcaca ccgccagcgc
     1621 gccggcgccg cgcgcgatcg ccgcgatggc gcggacgtcg ttcaccgtgc cgagcgcgtt
     1681 ggacacgtgg ttgaacgcga cgaccttcgt ccgcggaccg accatcgccc gcagggccgc
     1741 gaggtccacg tgctggtcgg tcgtgagggg gcagacgagg aaccgcgccc cccgcgccag
     1801 cgcgagctgc tgccagggaa cgaagttggc gtggtgttcc agccccgtga cgacgatctc
     1861 gtcgccggcc gcgacgttgg ccggccccca cgccgtggcc acgaggttca gcgcctcggt
     1921 ggtcccgcgc gtgaacagga ggcagtcggc gtcggccact cccatgaagc gggcgatgcg
     1981 ctcgcgggcg ccgtgatacc gctcggtggc gcgcgccgac aggtcgtagg cgccgcggtg
     2041 cggattggcg ttgtcgtgct cgtagtagtg gcggatcgcg tcgagcacgg cgcgcggctt
     2101 ctgcgaggtc gcggcggagt cgagatagtg caggccgggg ttcgcggcga gcagggggaa
     2161 gtccccgcgg cggctcgtcg tcatgcgctg cgctccccgg cgccggccgt ggcccgcccc
     2221 acgaggatgc ggccccgctc cacgcgcacg ggaaagacgg ggagcgggtc gacggcggga
     2281 tggcggcgca cctcgcccgt gcggcagtcg aaccgcgcgc cgtgccacac gcactcgatc
     2341 gtcccgtcgt cgcgcagcac gccgtcggac atcgcgaact cggcatgggt gcaccggccg
     2401 cccaccgctc cgatcactcc gccgcggttg tagaggcaca ccgccacgcc gtcgggcagg
     2461 gtgacgccga gcagctcgcc ctcgggcacg tcggccgccg cggcgacgtc ggcgaagtca
     2521 ctcaccgctc gagccctcgc tgatggcctt gtgcagggag tgccacgcca tgctcgcgca
     2581 cttcacccgg atcgggaagc gggacactcc gctgaacgcc gccatctcgc ccagcccccg
     2641 ggcctcctgc ggcgtcggct tgagcttccc cgtcaccagc tcgtggaact gccggaacag
     2701 ccgctcggcc tccgcgcgcg tcttcccctt caccgcctgg gtcatgatcg acgccgaggc
     2761 gcgcgacacg gcgcagcctt cggaggtgaa gcgcacgtcg gtgatgacgt cgtcctcgac
     2821 gatcagctcc agcgtgatct cgtcgccgca ggccggattg cggtcctgcc gccgcgtcgt
     2881 cgccccctcc agcgccccgt agttcttggg acgccggttg tgatcgagga tgatcgactg
     2941 gtagagctcc tggaggtcgg acacgggcgc tcggcctaca cgccggcgta gcggcgcagc
     3001 gtcgcggctt ccagcccctc gcgcacctcg gcgcacgcga tcgtctccag cacgtccgcc
     3061 gcgaatgcgt acgtgaggag ctcgcgcgcc gtccgggcgt tgaggccccg gctcttcatg
     3121 tagaagagcg acgtctcgtc cagtcgcccg acggtggcgc cgtgcgtgca cttcacgtcg
     3181 tcggcgaaga tctcgagctg cggcttggtg tcgatcttcg cccgctccga cagcagcagg
     3241 gtgttgttgg tctgcttgcc gtcggtcttc tgggccgccg ggtgcacgaa gaccttgccg
     3301 ttgaacaccc cgtgcgacgc gccgtccagg atccccttgt acagctcgcg gctgtagcag
     3361 ttgggcgcca cgtgctcgat gcgcgtctgg tggtcgatgt gctgctcgtc gtcgcccagg
     3421 tacaggccgt tgagcgtggc gccgcagccg tcgccgcgca gctcggtgta gatgttggtg
     3481 cgcgagagcg ccgcgccggt ggcgaagctg aacgacacga gatggctgtc gcgcgcctgg
     3541 cggacgtcga gcgtgccgac gtggaacgcc tgcgccgact cgcgctgcag cttcaggtgc
     3601 gtcagcgtgg cgccgtcgcc gatcgtcgcc tcggtgacgg cgttcgtgaa gtacgcgccg
     3661 gcgccgcgcg ccaccgtgac gtagctctcg atcaccgtcg ccttggcgaa gcggtcgagc
     3721 acgatgaggt tgcgcggctg ggccacgccg ttcaccgcat gctcgtcgct gacgaacagc
     3781 aggtggatcg gccgcgccac ctcgacgtcg gccgagacgt gcacgacggc cccgtcgttg
     3841 atgaacgccg tgttgagcgc cgtgacggtg tgcgcgtcca tcgaggtgat gcggccgacg
     3901 tgctgctcga ggagc
//
LOCUS       DASSYW010000542         2459 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1014627, whole genome shotgun sequence.
ACCESSION   DASSYW010000542 DASSYW010000000
VERSION     DASSYW010000542.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2459)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2459)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2459
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1014627"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..677
                     /locus_tag="VFN38_08645"
     CDS             <1..677
                     /locus_tag="VFN38_08645"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683412.1"
                     /note="an AccC homodimer forms the biotin carboxylase
                     subunit of the acetyl CoA carboxylase, an enzyme that
                     catalyzes the formation of malonyl-CoA, which in turn
                     controls the rate of fatty acid metabolism; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HET9011869.1"
                     /translation="HQKVIEEAPAPGMSDEARATVTGAAVKAARAVGYVGAGTVEFIA
                     DGSAGLKPDRIWFMEMNTRLQVEHPVTEMVTSFDLVKEQIRVAAGEHSSFQGDGRGLR
                     GHAIECRINAEDPYRGFQPSPGIITAYHPPGGPGVRVDTHVYAGYTVPPYYDSLLAKV
                     IVHGNDREEALSRMGQALDSFILEGITTTIPFLARVIRHPDFVAGKVDTRFLERESHL
                     LRPPEA"
     gene            674..1417
                     /locus_tag="VFN38_08650"
     CDS             674..1417
                     /locus_tag="VFN38_08650"
                     /inference="COORDINATES: protein motif:HMM:NF015962.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-phosphosulfolactate phosphatase"
                     /protein_id="HET9011870.1"
                     /translation="MKLDVLFTPAGLTLAEVQGRTAFVIDILRATTTMCAALGNGARA
                     ILPVASTEEALKLAQTLASDDVRLAGEKNCVRIEGFHLGNSPLEMTETAVRGRTLVVS
                     TTNGTRALLACQGAAAVHPTCAGNLSLAAERARETLEQDGAVLVVCAGRDNAFSLDDA
                     YAAGRLVTAVLGGSVKRRGLNDAALASLDLVRRYGERWERPLRRSRAGRELIRLGFAA
                     DVADAARLDAYPVLPAFHDRRVTLAAVPV"
     gene            1435..>2459
                     /locus_tag="VFN38_08655"
     CDS             1435..>2459
                     /locus_tag="VFN38_08655"
                     /inference="COORDINATES: protein motif:HMM:NF036827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HET9011871.1"
                     /translation="MLSPGDGGRRRRLGALTALVAGLFLGLTLLPVKVTGPVGGYIGH
                     ALWQLLGAGALGIPLLGIGLALAGFDRLGGLDMKRSAILIVGLSVLVPYVVGVLSDVS
                     PADLDADVGQRGFAARMVGLVPGFLAQVISGKIGVAGAVLLGFLALSALTLVTFAWHP
                     LQRLEADRRTGGPGDRVDSGTAGRRDGGTEVGAATGERRRKERKPKEEPAAAETAEES
                     GSVLAGLLPSRRPAVPPSRKRERKLEAPPAPAEESDTPPVDLLTAPAREDIDAGEAQL
                     DRLGQSLLETLRTFKVEGQISGRTTGPVVTQFEVVPGAGVKAGRIVALADDLAMSMRA
                     PSIRVAP"
BASE COUNT          347 a          855 c          916 g          341 t
ORIGIN      
        1 gccaccagaa ggtgatcgaa gaggccccgg cgcccggcat gtccgacgag gcccgcgcca
       61 ccgtgacggg ggccgcggtc aaggccgccc gggccgtcgg ctacgtgggc gccggcaccg
      121 tggagttcat cgccgacggg agcgccggcc tgaagccgga ccgcatctgg ttcatggaga
      181 tgaacacccg gctgcaggtg gagcatccgg tgaccgagat ggtcaccagc ttcgacctgg
      241 tgaaggagca gatccgggtg gcggcggggg agcatagcag cttccagggg gacggtcgcg
      301 ggctgcgggg ccacgcgatc gaatgccgga tcaacgccga ggacccctat cgcgggttcc
      361 agccttcacc gggcatcatc accgcgtatc acccgccggg cggccccggc gtccgggtgg
      421 acacccacgt gtacgccggc tacacggtgc cgccctacta cgactcgctg ctcgccaagg
      481 tgatcgtcca tgggaacgac cgggaagagg cgctgagccg gatgggtcag gcgctggaca
      541 gcttcatcct ggaaggcatc accaccacga tcccgttcct cgcccgggtg attcgccatc
      601 cggacttcgt ggccgggaag gtggacaccc gcttcctgga gcgggagtcg cacctgcttc
      661 gtccgccaga ggcatgaagc tcgacgtcct gttcacgccg gccggcctga cgctcgccga
      721 ggtccagggc cggacggcgt tcgtgatcga catcctccgg gccaccacca ccatgtgcgc
      781 tgccctcggc aatggggcgc gcgcgatcct gccggtggcc tccaccgagg aggcgctcaa
      841 gctcgcgcag accctcgcca gcgacgacgt ccgcctggct ggcgagaaga actgcgtgcg
      901 gatcgagggc ttccacctgg gcaacagccc gctggagatg accgagaccg ccgtgcgcgg
      961 tcggacgctg gtggtcagca ccaccaacgg aacccgggcg ctgctcgcct gccagggcgc
     1021 cgccgcggtg catcccacgt gcgccggaaa cctgagcctc gccgcggagc gggcgcggga
     1081 gacgctggag caggatggcg cggttctggt cgtgtgcgcc ggccgcgaca acgcgttctc
     1141 gctggacgac gcctacgcgg ccggccgtct cgtcacggcg gtgctcggcg gatcggtgaa
     1201 gcgacgcggt ctcaacgacg ccgcgctcgc gagcctggac ctggtgcgcc gctacggcga
     1261 gcgatgggag cggccgctac gccggagccg cgccggacgc gagctcatcc gactcggctt
     1321 cgccgcggac gtggcggacg cggcgcgact cgacgcctat cccgtgctcc cagcctttca
     1381 cgaccggcgg gtcaccctcg ccgcggtgcc ggtgtgaccg cgccgccctc accaatgctc
     1441 tcgcccggcg acgggggccg gcgacggcgg ctgggtgcgc tgaccgcgct ggtggcgggc
     1501 ctctttctcg gcctcacgct gctgccggtg aaggtcaccg gaccggtcgg cggttatatc
     1561 ggacacgcgc tctggcagct gctcggcgcc ggcgccctgg gcattccact cctggggatc
     1621 ggccttgcgc ttgcaggctt cgaccggctg ggcgggctgg acatgaagcg gtccgcgatc
     1681 ctcatcgtgg gcctcagcgt gctggtcccc tacgtcgtgg gcgtgctgag tgacgtgagc
     1741 ccggccgatc tcgacgccga cgtggggcag cgcgggttcg cggcccgcat ggtgggactc
     1801 gtgccgggat ttctggcgca ggtcatctcc ggcaagatcg gggtcgccgg cgccgtgctg
     1861 ctcggcttcc tcgctctgtc cgcgctcacg ttggtgacgt tcgcgtggca cccgttgcag
     1921 cggctggagg ccgaccggcg gacgggcgga ccgggggacc gggtggacag cgggacggcg
     1981 ggacggcgag acggcgggac ggaggttggc gctgccaccg gggagcggag gcgaaaggag
     2041 cggaagccga aggaagagcc tgccgcggcc gagaccgccg aggaaagcgg cagcgtactc
     2101 gccggcttgc tgccatcccg ccgccccgcc gtcccgccgt cccgcaagcg agagcgcaag
     2161 ctcgaggcgc cacccgcgcc cgccgaggaa tccgatacgc cgcccgtgga cctgctcacg
     2221 gccccggccc gcgaggacat cgatgccggc gaggcgcagc tggaccggct gggtcagtcg
     2281 ctgctcgaga ccctgcggac cttcaaggtc gagggccaga tctcggggcg gacgacgggg
     2341 ccagtggtga cgcaattcga ggtggtaccg ggagccggcg tgaaggcggg ccgcatcgtc
     2401 gccctggcgg acgacctggc catgtccatg cgggcgccgt ccatccgtgt ggcgccgat
//
LOCUS       DASSYW010000543         2840 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1640990, whole genome shotgun sequence.
ACCESSION   DASSYW010000543 DASSYW010000000
VERSION     DASSYW010000543.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2840)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2840)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2840
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1640990"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..281
                     /locus_tag="VFN38_08660"
     CDS             <1..281
                     /locus_tag="VFN38_08660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011872.1"
                     /translation="MGIFLAGLIAALAVLGLEQIDTTFHSVDELQQFTNLPVLAAIPR
                     LQTAAGPQWARVAVITASMLAGVVLVGTLSAHLARDNEPLVRLLVRGS"
     gene            295..1011
                     /locus_tag="VFN38_08665"
     CDS             295..1011
                     /locus_tag="VFN38_08665"
                     /EC_number="2.7.10.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004713 - protein tyrosine kinase activity
                     [Evidence IEA];
                     GO_function: GO:0004715 - non-membrane spanning protein
                     tyrosine kinase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CpsD/CapB family tyrosine-protein kinase"
                     /protein_id="HET9011873.1"
                     /translation="MRMQPSSSHAGATLALPGTFAAEQYQNLRLKVERLQQSRGVRVV
                     AITSPGTSDGKTLTSINLAVALARGPGARVLLIDADLRRPSVGSQLGLTDDGQGLATA
                     VGDGDVRLPDIVRTVEGVHGLSVLPGAPVSGDVHEVLRSPRFDQLLQDARGVYDFIVL
                     DTPPLVPVCDAAVMSRVVDGLLVVVAAHETTRKQLGEALSLLDEQKTLGLVFNGDRPR
                     TSKYDAYYRSAAGLKTGGYN"
     gene            1013..2005
                     /locus_tag="VFN38_08670"
     CDS             1013..2005
                     /locus_tag="VFN38_08670"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HET9011874.1"
                     /translation="MKPASLDVFVCPGCRGDLRLHSTVSDGGEVLDGDLTCRGCGAEY
                     PVTRGVPRFVSSGDYAGSFGHQWHWFREVQIDSLNRMSISEATLQSTTGWSDSDYRGR
                     RLLDAGVGAGRFAERAAAKGAEVFGIDLTPAVDAAYQNIGRRPNVHLAQADIFALPVR
                     RETFDLAYSIGVLHHTPNPPLAFTRVAETVAPGGKLAIYVYSRYGPAHRMSDAFRVVT
                     TRLPLRVVWTLSAAAVPLYYVHRLPVVGKAFRLALPISMEPHWRWRWLDTFDWYTPTY
                     QAKYLYPEVFRWFRDNGFEVVDLPDGPVRVTGVKRLPDGLQRDGIRKYSALVAS"
     gene            1965..>2840
                     /locus_tag="VFN38_08675"
     CDS             1965..>2840
                     /locus_tag="VFN38_08675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011875.1"
                     /translation="MTAFENTAPWWRPEARAAAAASPVVETGRTAFAGLLAFTFILIV
                     SPQAWFPVLGSLRIALVAAAVAIVAELLDRSMNRRPLHRTPTAFTLVMAIVSWAVVTL
                     PLSYWPGGSVAALTDHFLKAIAFFWLIATVVTTESRLRRFLWLLVLASLPLSYTALQN
                     FASGSFLRTPDGAVPRIAGYTMAGSGLAANPNDLALMINLLIPFAAALMVMSRRLLPR
                     LVAGGALLLGIAGVIVTFSRAGFLTLAAMGLVGLLALGRRRPLALLVAVVVLAMASTT
                     LPQGYFERLSTITDIE"
BASE COUNT          362 a          988 c         1006 g          484 t
ORIGIN      
        1 tcatgggcat cttcctggcc ggcctgatcg ccgcgctcgc cgtgctgggc ctcgagcaga
       61 tcgacacgac gttccacagc gtggacgaac tgcagcagtt cacgaatctg ccggtgctcg
      121 cggccattcc gcggctgcag acggcggccg ggccgcagtg ggcgcgtgtc gcggtcatca
      181 ccgcgtcgat gctcgcgggc gtcgtgctcg tgggcacgct gtcggcgcac ctggcgcggg
      241 acaacgagcc gctggtccgt ctgctggtgc gcggcagcta gcgggagacc tgacatgcgc
      301 atgcaaccat cgtcatcaca cgccggcgcg acgctggcgc tgcccggcac ctttgccgcc
      361 gagcagtacc agaacctgcg cctcaaggtc gagcggctcc agcagtcgcg cggcgtccgg
      421 gtcgtggcca tcacgagccc cggcacgagc gacggcaaga cgctgacctc gatcaatctg
      481 gccgtggcgc tggcgcgcgg tcccggcgcg cgcgtgctgc tcatcgacgc cgacctgcgc
      541 cgtccgtccg tcggctcgca actcggtctg accgacgacg ggcaggggct cgcgacggcc
      601 gtgggtgacg gcgacgtccg gctgcccgac atcgtccgga cggtcgaggg cgtgcacggg
      661 ctgtcggtgc tgcccggcgc accggtgtcg ggcgacgtgc acgaggtgct gcggtcgccg
      721 cggttcgacc agctgctgca ggacgcccgc ggcgtctacg acttcatcgt gctcgacacg
      781 ccgccgctcg tgccggtgtg cgacgcggcg gtgatgtcgc gcgtcgtgga cgggctgctc
      841 gtggtggtgg ccgcgcacga gaccacgcgc aagcagctcg gcgaggcgct gagcctgctc
      901 gacgagcaga agacgctcgg cctggtgttc aacggcgatc gtccccgcac gtcgaagtac
      961 gacgcctact acagatctgc ggccggtcta aagaccggcg gctacaactg acatgaagcc
     1021 agcctcgctc gacgtgttcg tgtgccccgg gtgccggggc gacctgcggc tccactccac
     1081 ggtctcggac ggtggggaag tgctggacgg cgatctcacg tgccgcggct gcggtgccga
     1141 gtatccggtg acgcgcggcg tgccgcggtt cgtcagctcg ggcgactatg ccggcagctt
     1201 cggccaccag tggcactggt tccgcgaagt gcagatcgac tcgctgaacc ggatgtcgat
     1261 ctcggaggcc acgctgcaat cgaccaccgg ctggtccgac agcgactacc gcggccggcg
     1321 cctgctcgac gccggcgtcg gcgccgggcg cttcgccgag cgcgccgccg ccaagggcgc
     1381 cgaggtgttc gggatcgatc tcacgccggc ggtcgacgcc gcgtatcaga acatcggccg
     1441 gcggcccaac gtgcacctgg cgcaggccga catcttcgcg ctgcccgtgc ggcgggagac
     1501 cttcgacctc gcctactcga tcggcgtgct gcaccacaca ccgaacccgc cgctggcgtt
     1561 cacccgcgtc gccgagacgg tggcgcctgg cggcaagctc gccatctacg tgtattcgcg
     1621 ctacggcccc gcgcaccgga tgtccgacgc gttccgcgtg gtgaccacgc ggctgccgct
     1681 gcgcgtggtg tggacgctgt cggccgcggc ggtgccgctc tactacgtgc accggttgcc
     1741 ggtggttggc aaggcgttcc gtctggcgct gccgatctcg atggagccgc actggcgctg
     1801 gcggtggctc gacacgttcg actggtacac gccgacctat caagcgaagt acctctaccc
     1861 ggaagtgttc cgatggttcc gcgacaacgg gttcgaagtg gtggacctgc ccgatggtcc
     1921 ggtgcgcgtg acgggagtca agcgcctgcc ggacggactg cagcgtgacg gcattcgaaa
     1981 atacagcgcc ctggtggcgt cctgaagccc gcgcggcggc cgccgcgtcc ccggtcgtcg
     2041 agaccggccg gacggcgttc gccggcctgc tggcgttcac cttcatcctg attgtgtctc
     2101 cgcaggcgtg gtttcccgtg ctcggcagcc ttcgcatcgc gctcgtggcg gccgccgtgg
     2161 cgatcgtcgc cgaactgctg gaccggtcga tgaaccggcg gccgctgcac cgcacaccga
     2221 cggcgttcac gctggtgatg gcgatcgtga gctgggcggt ggtcaccttg ccgctctcgt
     2281 attggccggg tggcagcgtg gcggcgctga ccgatcactt cctgaaagcg atcgcgttct
     2341 tctggctgat cgcgacggtc gtcaccaccg agagccggct gcgacggttt ctgtggctgc
     2401 tcgtgctggc gtcgctgccg ctgtcctaca ccgcgttgca gaacttcgcg tccggcagct
     2461 tccttcgcac gcccgacggc gccgtgccgc gcatcgccgg ctacacgatg gccggttcgg
     2521 ggctggccgc caatccgaac gatctggcgc tgatgatcaa cctcctgatt ccgtttgccg
     2581 ccgcgctcat ggtgatgtcg cgccggctgc tgccgcggct cgtggcgggg ggcgccctgc
     2641 tgctcggtat cgccggcgtg atcgtcacgt tctcgcgcgc cggcttcctg acgctcgcgg
     2701 cgatggggct ggtggggctg ctggcgctcg gacgccgccg gccgctcgcg ttgctggtgg
     2761 ccgtcgtggt gctggcgatg gcctctacca cgctgccgca gggctacttc gaacggctca
     2821 gcacgattac cgacatcgag
//
LOCUS       DASSYW010000544         2878 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_149765, whole genome shotgun sequence.
ACCESSION   DASSYW010000544 DASSYW010000000
VERSION     DASSYW010000544.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2878)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2878)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2878
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_149765"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1566)
                     /locus_tag="VFN38_08680"
     CDS             complement(<1..1566)
                     /locus_tag="VFN38_08680"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HET9011876.1"
                     /translation="MRARALRFALVALAVAAGSTTLPAQYSLTVNKDRLMNAQNEPQN
                     WLLMNGDYGSLRYSRLTQINRENVKNMRMVWAMALGGMQDVGQNGPENEMNPLIDNGF
                     MYTSDGWGTIYKIDARDGNRGKFAWVADPGVPHEGNTSRTRGIALWEDKVLANLLDGR
                     VIAINRENGEILWDKKVAGKNEFGGQERLSAAPLVADGKVLVQNGAGDAGTRGWVAAL
                     DVNTGNELWRWYTVPKPGEPGSETWKDDHNAWKTGGGGVWQTGSYDAAQNLYIFGTGN
                     PVPIYDPQFRPGDNLYTNSVVALNVATGKMAWYFQYTPSDSWDYDEAGVFMLYDTTIG
                     GRARKVVGHYARNGFFYTVDRTNGRFIAAEKYVNDLNWTKGIDPESGKPVDYNPKLDV
                     QVYNPEARALRGDPKKRTCPTWHGGVAHQPMAYNPVKKIAYGVGTEGCFSQNGAAVGV
                     LSKDGGIDNKTSQPRQYASDLYYGALTAFDAVGHKVIGKAVTDIEIRSGATATAGGLV
                     FTALQDGWVVAYND"
     gene            complement(1618..2730)
                     /locus_tag="VFN38_08685"
     CDS             complement(1618..2730)
                     /locus_tag="VFN38_08685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011877.1"
                     /translation="MSIAPRILAVEPDRSHAVALKRFVQSCVDADLLVVDSVAAAKAA
                     LSERLPQAVLVSELVSPDDDVDLTAFVRSRMPGRPVPILAVPAMGGDDAEMSAPPRGL
                     LRLIASGGSLTDAPRLQLARRQSALRHALQTVMDLPGTPAGAAAVTVGTHPRAPRWKG
                     DNIPWLSRVTMPLGLEVRLVNISRSGLLIESRGSFVAGQPAAFELHGRLRVVVPGRFV
                     RSTAVASDGVQLYHSAALFDDDLPLFAPLASGTHAGAVVTSDLGEVLAWVRGEARSGM
                     RAERIRAAFELSVQELVGARAVLICRAPAQADEPGDSVCLPVPTTDGSIAFLQAIYDT
                     ARPPSSHAFEQLQAAATLAADILEMETIARAADRRH"
BASE COUNT          430 a          960 c         1016 g          472 t
ORIGIN      
        1 gtcgttgtag gccacgaccc agccgtcctg cagggcggtg aagaccaggc cgccggcggt
       61 cgccgtcgca cccgagcgga tctcgatgtc ggtgacggcc ttgccgatca ccttgtggcc
      121 caccgcgtcg aacgcggtga gcgcgccgta atagaggtcg cttgcgtact gccgtggctg
      181 gctggtcttg ttgtcgatgc ccccgtcctt cgacagcacg ccgaccgcgg cgccgttctg
      241 cgagaagcag ccctcggtgc ccacgccata cgcaatcttc ttcaccgggt tgtaggccat
      301 cggctgatgc gcgacgccac cgtgccaggt cgggcacgtg cgtttcttcg gatcgcctcg
      361 cagcgcgcgt gcctcggggt tatagacctg cacgtcgagt ttcgggttgt agtcgaccgg
      421 ctttcccgat tccgggtcga tgcccttggt ccagttgaga tcgttcacgt acttttcggc
      481 ggcgatgaag cggccgttgg tgcgatcgac ggtgtagaag aatccgttgc gcgcgtagtg
      541 gccaaccacc ttccgcgccc ggccgccaat cgtcgtgtcg tagagcatga acacgccagc
      601 ctcgtcgtaa tcccacgagt cgctcggcgt gtactggaag taccacgcca tcttgccggt
      661 agccacgttc agcgcgacga cggagttggt gtagaggttg tcgccgggac ggaactgcgg
      721 gtcgtagatg gggacggggt tgccggtacc gaagatgtag agattctgcg ccgcatcata
      781 cgagccggtc tgccagacgc cgccgccgcc ggtcttccac gcgttgtgat cgtctttcca
      841 cgtctcgctg cccggctcac ccggcttggg caccgtgtac cagcgccata gctcgttgcc
      901 ggtgttgacg tcgagcgcgg cgacccagcc gcgcgtgcca gcgtcgccgg cgccgttctg
      961 gacgaggacc ttgccgtcgg cgacgagcgg cgcggccgag agtcgctcct gaccgccgaa
     1021 ctcgttcttt ccggcgacct tcttgtccca gagaatctcg ccgttctcac gattgatggc
     1081 gatgacgcgc ccgtcgagca ggttggccag gaccttgtcc tcccacagcg cgatgccgcg
     1141 cgtgcgtgag gtgttgccct cgtgcggtac gccggggtcg gcaacccagg cgaacttgcc
     1201 gcggttcccg tcgcgcgcgt cgatcttgta gatcgtgccc cagccgtcgc tcgtgtacat
     1261 gaacccgtta tcgatcagcg ggttcatctc gttttcgggg ccgttctgcc cgacgtcctg
     1321 catcccgccg agcgccatcg cccacaccat ccgcatgttc ttgacgttct cgcggttgat
     1381 ctgcgtgagc ctcgaatagc gcagcgagcc gtagtcgccg ttcatgagca gccagttctg
     1441 cggctcgttc tgggcgttca tcaggcggtc cttgttgacc gtcagcgaat attgcgcggg
     1501 aagcgtcgtg gacccggcgg cgacggccag ggcgacgagg gcgaaccgaa gggcgcgtgc
     1561 tctcatgcgc gccattgtag gccgggtggg ccaggtaggc caggtaggcc aggtgggtta
     1621 gtgacgccgg tcggcggcgc gggcgatcgt ttccatctcg aggatgtcgg cggccagcgt
     1681 ggcggcggcc tggagctgct cgaacgcgtg cgacgacggc gggcgggccg tgtcgtagat
     1741 cgcctggaga aaggcaatcg acccgtcggt cgtcggcacc ggcaggcaca ccgagtcgcc
     1801 aggttcgtcg gcctgcgccg gcgcgcggca gatgaggacg gcgcgcgcgc caaccagttc
     1861 ctggacgctc aactcgaacg cggcgcggat gcgttccgcg cgcatccccg accgcgcctc
     1921 gcctcggacc caggccagta cctcgccgag gtcgctggtg acgacggcgc cggcgtgcgt
     1981 gcccgacgcg agcggcgcga agagcggcag atcgtcgtcg aagagcgccg ccgagtgata
     2041 cagctggacg ccgtcggacg ccacggcggt gctgcgcacg aagcgtccgg gcacgaccac
     2101 gcggagccgg ccgtgcagct cgaacgccgc cggctgaccc gccacgaagc tgccgcgcga
     2161 ttcgatcagc aggccgctgc gcgagatgtt gacgagccgc acctcgaggc cgagcggcat
     2221 ggtgacgcgc gagagccagg ggatgttgtc gcccttccat cgcggcgccc tcgggtgggt
     2281 cccgacggtg acggcagcgg cgcccgccgg cgtgccgggc agatccatga cggtctgcag
     2341 cgcgtggcgc agcgccgact gacggcgcgc cagctgcagc cgcggcgcat cggtcagcga
     2401 accgccggac gcaatgaggc ggagcagccc gcgcggcggg gcggacatct cggcatcgtc
     2461 gccgcccatg gcagggaccg cgagaatggg cacggggcgt cccggcatcc gcgagcgcac
     2521 gaaggccgtg agatcgacgt cgtcgtccgg cgagaccagt tcggacacga gcaccgcctg
     2581 cggcaggcgc tccgacagcg cggccttggc ggcggccacc gagtccacga ccagcagatc
     2641 cgcgtcgaca cacgattgca cgaagcgctt cagcgccacg gcgtgggagc ggtccggctc
     2701 gacggcaagg atgcgagggg cgatcgacat cggtacgcgc gcggatggcg caagttgact
     2761 gccagcggcg gcctcgcgca tttcagcgga aatcgggcgc gataccgcga gaggcccgcg
     2821 cacgagtcgc ctggggggca gacaaagggg cgcttatccg gccccggcga gctaccat
//
LOCUS       DASSYW010000545         3344 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_19423, whole genome shotgun sequence.
ACCESSION   DASSYW010000545 DASSYW010000000
VERSION     DASSYW010000545.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3344)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3344)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3344
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_19423"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..404)
                     /locus_tag="VFN38_08690"
     CDS             complement(<1..404)
                     /locus_tag="VFN38_08690"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: protein motif:HMM:NF020132.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HET9011878.1"
                     /translation="MSHQQFSLSYARNCTVMKRALTIAGSDSGGGAGIQADLKTFAAH
                     GVYGTSAITAITAQNTLGVTAVHTVPADIVVAQIEAIASDIGTDAVKTGMLATAAIVE
                     AVAAAIQELDLPRVVVDPVMVAKGGSRLLDEEA"
     gene            404..976
                     /locus_tag="VFN38_08695"
     CDS             404..976
                     /locus_tag="VFN38_08695"
                     /inference="COORDINATES: protein motif:HMM:NF014669.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin transporter BioY"
                     /protein_id="HET9011879.1"
                     /translation="MLARLAPTALDRTIVRTGAVLIMTLLTVLAAQISVPLPFTPVPF
                     TLQPMLVLVGGAALGARLGATSQILYLALGIAGLPVFAASPMLPQGAPRLLGPTGGYL
                     MAYPIAAFVVGYLAKRGFDRRYWRSFLAMAVGLAMIFACGVIWLATFAAPGAGLSGAI
                     AAGFTPFVVADLAKLVIAAGILPTFWKFVR"
     gene            complement(1073..2986)
                     /locus_tag="VFN38_08700"
     CDS             complement(1073..2986)
                     /locus_tag="VFN38_08700"
                     /inference="COORDINATES: protein motif:HMM:NF013799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HET9011880.1"
                     /translation="MTPQNRPNNQLEVGELRERLRALGYLNAGVDRFVLAPAARRRSV
                     LGLAWGVSVRIGLIAALLLGPAAGIGVAIRLPGLIAGARDAVVIVVYLALIFGGAAAV
                     TSFLAAAGVTVLTRGVRAQTARRIGLGAGWAVGLACLAYLALWWNASGSVWSAPVRTL
                     VAIAAAVAVSLLIGHAVSLASLALLARERGAEDVAPPVLSLRATLMVAAAAFLGTSGV
                     LALSLVRDAPAKVPLFPVVPTGLRVVVIGIDGFDPQLRQGIADRLPVLTRLTRRAETA
                     RQANDTDPARVWTTVGTGMPSAAHGVSGFELRRVAGLGGTVRGDGTSGPISAMTGVTD
                     LLRLTRPTAISGVVRREKMFWEVAAEHGFDAAVVNWWATWPATNTRAIVISDRAALRL
                     ERGGAESAEIAPASLYEPLRKRWPDITRRARELEAALTANVAEPRIREVLSRSAVLDA
                     EQVLIARDPLLGTPDVLAVYLPGLDIAQHELLQSEDATSSASALASRVEAIRRYYVFL
                     DGLVDMLLRSGPGDVVGLVTHPGRVGNAAALVEFSGGPIDANVVIDRAPEGMPSLLDV
                     APTVLRLLGMPISRELPGRADHWPVTREFRERHPVQFVAGYGRYAVELPAQEGKPLDE
                     ETLERLRSLGYIR"
     gene            complement(2983..>3344)
                     /locus_tag="VFN38_08705"
     CDS             complement(2983..>3344)
                     /locus_tag="VFN38_08705"
                     /inference="COORDINATES: protein motif:HMM:NF012568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HET9011881.1"
                     /translation="ERIHRRKTGALFSAAATAGAMTAGGSLEQIAAVAAYAKNLGLAF
                     QIVDDLLDVEGDPAETGKAQRQDAKKTTFVSFSGADGARQLALELCETADASLEPFGR
                     RADRLRRLSAFVAGRRL"
BASE COUNT          540 a         1163 c         1109 g          532 t
ORIGIN      
        1 gcctcctcgt cgagcagtcg cgagccaccc ttggcgacca tcacggggtc gacgaccacg
       61 cgtggaaggt ccagctcctg gatggccgcg gccacggcct cgacaatcgc ggcggttgcc
      121 agcatgccgg tcttgacggc gtcggtcccg atgtcgctcg cgatggcttc gatctgtgca
      181 acgacgatgt cggccgggac cgtgtgcacg gcggtgacgc cgagggtgtt ctgggccgtg
      241 atcgctgtaa tcgcagacgt gccgtagacg ccgtgggcag cgaaggtctt caagtctgcc
      301 tggataccgg cgccgccgcc cgagtcgctg ccggcgattg tcagtgctct tttcattacg
      361 gtacaattcc tcgcatatga cagtgagaac tgctgatgcg acattgctcg cgcgcctggc
      421 gccgacggcc ctcgatcgca ccatcgtgcg gaccggcgcg gtgctgatca tgacacttct
      481 cacggtgctt gcggcgcaga tcagcgttcc gctgccgttt acaccggtgc cgttcacgct
      541 tcagccgatg ctggtgctag ttggcggcgc cgcgctcggc gcgcgactcg gcgcgacgag
      601 ccagatcctg tacctggcgc tgggcattgc cggactgccg gtcttcgcgg cttcccccat
      661 gctcccgcag ggcgcgccac ggctcctcgg tcccacgggt ggatacctga tggcgtatcc
      721 gattgccgca ttcgtggtgg gctacctcgc caagcgggga ttcgacaggc ggtactggcg
      781 gtcgtttctc gcgatggccg tagggctcgc gatgatcttc gcgtgcgggg tgatctggct
      841 ggcgacgttc gcagcgcccg gtgctggcct gagcggggcg attgcagccg gcttcacgcc
      901 gtttgtcgtt gcagatctcg cgaagctcgt gattgccgcg ggaattctgc cgaccttctg
      961 gaaattcgtg cgctaggcga caaccgccgt ctccaaacaa acgggggacc gccggtctaa
     1021 agaccggcgg ctaccgttcg tttgtccttt gtcctttgtc cttgacaggc tcttatcgga
     1081 tatacccgag gctcctcagc cgctccagcg tctcctcgtc gagcggtttg ccttcctgcg
     1141 ccggcaattc caccgcgtag cgtccgtaac ccgccacgaa ctgcacgggg tgcctctccc
     1201 ggaactccct cgtgaccggc cagtggtcag cccggccggg cagctcgcgg ctgatcggca
     1261 tacccagcag gcgcaagacg gttggcgcaa cgtcgagcag tgacggcatc ccttccgggg
     1321 cccggtcgat cacgacgttc gcatcgattg gtccgccgct gaactcaacg agtgcggccg
     1381 cgttcccgac gcggcccgga tgcgtcacca ggcccacgac gtcgcccggg ccgctgcgga
     1441 gcagcatgtc aacgagccca tcgagaaaga cgtagtagcg tcgaatcgcc tcgacccgcg
     1501 acgccaacgc cgacgccgag gacgtagcgt cctcgctttg aagcagttcg tgttgcgcga
     1561 tgtcaagccc aggaaggtag actgcgagga catccggcgt ccccagaagc gggtcacgcg
     1621 caatcagcac ctgctcggca tcgagcactg cggagcggct gagcacttcg cgaattcggg
     1681 gctccgccac gttggcggtc agggcagcct cgagttcccg cgctcgccgt gtgatgtctg
     1741 gccagcgttt acgcaacggt tcatagagcg aggcgggcgc gatctcagcg ctctccgccc
     1801 cgccacgttc gaggcgaaga gcggcccgat ccgaaatcac gatcgcacgc gtgttcgtgg
     1861 ccggccaggt ggcccaccag ttcacgaccg cggcgtcgaa gccatgctcc gctgcgactt
     1921 cccagaacat cttctcgcgc cggacgacgc cgctgatggc ggtggggcgt gtgaggcgga
     1981 gcaaatccgt gacgcccgtc atcgcggaga tcggcccgct ggtaccgtcg cctcgcacgg
     2041 tgccgccgag gcctgccacc cgtctcagct cgaagcccga gacaccatga gctgcagagg
     2101 gcatcccggt gccgacggtc gtccacacgc gcgcgggatc cgtgtcgttc gcttgccgag
     2161 cggtttcggc acgacgcgtc aagcgcgtca ggacgggcaa cctgtccgcg atcccttgac
     2221 gcaattgcgg atcgaagcca tcgattccga tcaccaccac gcggagtccc gtggggacaa
     2281 cgggaaacag cggcaccttc gcaggcgcgt cgcgcaccag cgagagcgcg aggaccccgc
     2341 tcgtgccgag gaaggccgcc gcggcgacca tgagggtcgc gcgcaacgac agcacgggtg
     2401 gcgcgacgtc ctcggcgcca cgctcgcgcg cgagcagcgc cagcgacgcg agcgagacgg
     2461 catggccgat cagcaaactg acagcgacgg cggccgcaat cgcgacgagg gttcggaccg
     2521 gtgcgctcca gacgctgccg ctcgcgttcc accagagtgc gaggtacgcg aggcacgcga
     2581 ggccgacggc ccacccggcg ccgagcccga tccggcgggc cgtttgcgcg cggacaccgc
     2641 gcgtaaggac cgtcacacca gccgccgcga gaaacgacgt aacggcggcc gcgccgccga
     2701 agatcagcgc cagatacaca acaatcacga ccgcgtcgcg cgcgcccgcg atcagtcccg
     2761 gcaaccggat ggccacgccg atgccggccg ctggtccgag caaaagcgcg gcgatcagcc
     2821 cgatacggac gctgacgccc cacgcaagtc ccaacaccga ccgccggcgc gcggccggcg
     2881 cgagcacgaa gcgatcgacg ccggcattca ggtaaccaag ggcacggagc cgctcgcgca
     2941 gctcgccgac ctcgagctgg ttgttcggac ggttttgggg ggtcacaaac gcctgcctgc
     3001 gacgaatgcc gacagccgac gcaggcgatc cgcgcgccgg ccgaacggct cgagcgacgc
     3061 gtcggcggtc tcacacagtt ccaacgcgag ctgacgcgcg ccgtcggcgc ccgagaacga
     3121 cacgaacgtc gtcttcttcg cgtcctgccg ctgcgccttg cccgtttcgg cgggatcccc
     3181 ttcgacatcc agcaggtcat cgacgatctg gaacgcgagc ccgaggttct tggcgtaggc
     3241 ggccacggcg gcgatctgct cgagcgaacc tccggcggtc attgcgccgg cggtcgccgc
     3301 cgcgctgaag agcgcgccgg tcttccgccg atggatgcgc tcca
//
LOCUS       DASSYW010000546         2374 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1681650, whole genome shotgun sequence.
ACCESSION   DASSYW010000546 DASSYW010000000
VERSION     DASSYW010000546.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2374)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2374)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2374
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1681650"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..932
                     /locus_tag="VFN38_08710"
     CDS             <1..932
                     /locus_tag="VFN38_08710"
                     /inference="COORDINATES: protein motif:HMM:NF017745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF885 family protein"
                     /protein_id="HET9011882.1"
                     /translation="RELKREQAAFRAAAERLAPGQDPQVTWLAVRRDHPPMGGVVHAA
                     RVITDSLTRFVRERGIASIPAGEHVVVKPAPPFDLGFASMHARPPLESAAVQSVFYIT
                     DASPDLPPAQREAWLERYNYASLSNTAAHEAMPGHWLHSIYMRDTPGKVRRIWIGLNP
                     FPQPSSGQDGWAHYAEQMVLDEGFGAGDPRLRMAQVSDALTRICRLLSGIRLHTREWS
                     LADAQRCFEQEAYVAAPAAKREAARGTYDPTYGGYFLGKRGLLALRADYAARRGAAFS
                     LREFHERVMRNGIAPIAAHRALMLPGDTASVIR"
     gene            complement(947..1366)
                     /locus_tag="VFN38_08715"
     CDS             complement(947..1366)
                     /locus_tag="VFN38_08715"
                     /inference="COORDINATES: protein motif:HMM:NF024092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HET9011883.1"
                     /translation="MPRPILLASIILTCVGATARAQSPADTMPVRVVERAIEAFKRKD
                     LDATFADYDTTFTYEILGDGKGQRRVRRADWVRQMKSDTSVVEFMNTWSITKIERGSR
                     GPWVFDIWTVRGPNGETMKHVDLFEVRNGKIVREIEG"
     gene            1682..>2374
                     /locus_tag="VFN38_08720"
     CDS             1682..>2374
                     /locus_tag="VFN38_08720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MIP/aquaporin family protein"
                     /protein_id="HET9011884.1"
                     /translation="MSPFLAELLGTAILIVLGDGVVANVVLARTKGQGSGWIVITAGW
                     AFAVTIAVYCVNAISGAHLNPAVTIALAAIGSFPWAKVPAYIAAQIIGGFIGAVIVWL
                     AYLPHFAATADAESKLAVFSTTPAIRQRYANLAAEVIGGFALVLALLAVLSPGNFVPG
                     SDLAKGFGPILVGVIVWAIGLSLGGPTGYAINPARDLGPRLAHAVLPIAGKGGSDWGY
                     AWIPIVGPIVGGV"
BASE COUNT          324 a          848 c          808 g          394 t
ORIGIN      
        1 agcgcgagct gaagcgcgag caggcggcct tccgtgccgc cgccgagcga ctcgcgccgg
       61 gacaggatcc gcaggtgacc tggctcgccg tgcgtcgtga ccatccgccg atgggcggcg
      121 tggtacacgc ggcgcgggtg atcaccgact cgctcacccg cttcgtgcgc gagcggggca
      181 tcgcatcgat cccggcgggc gagcacgtcg tcgtgaagcc tgccccgccc ttcgacctcg
      241 gcttcgcgtc gatgcacgcg cgtccgccgc tggagtcggc ggcggtgcag agcgtcttct
      301 acatcacgga tgcgtcgccc gacctgccgc cggcgcagcg ggaggcgtgg ctggagcgct
      361 acaactacgc gtcgctctcg aacaccgcgg cgcacgaggc gatgccggga cactggctgc
      421 actcgatcta catgcgcgat acgccgggca aggtgcgccg gatctggatc gggctcaacc
      481 cgtttccgca gccgtcgtcc gggcaggacg gctgggcgca ctatgccgag cagatggtgc
      541 tcgacgaggg attcggcgcg ggagatccga ggctgcggat ggcgcaggtg agcgatgcgc
      601 tgacgcggat ctgtcgcctg ctctccggca tccgcctgca cacgcgcgag tggtcgctcg
      661 ccgacgcgca gcggtgcttc gagcaggagg cgtacgtcgc cgcgccggcg gcgaagcgcg
      721 aggccgcgcg cgggacgtat gatcccacct acggcgggta ttttctcggc aagcgcgggc
      781 tgctggcgct gcgggccgac tacgccgcca ggcgcggcgc ggcgttcagc ctgcgcgagt
      841 tccacgagcg tgtgatgcgc aacggcatcg caccgatcgc ggcgcatcgg gcgctcatgc
      901 tgccgggcga cacagcctct gtgattcgct gacggccaga atctgtctag ccttcgatct
      961 ctcgcacgat cttgccgttt cgtacttcga acaagtcgac gtgcttcatg gtctcgccgt
     1021 tcggtccgcg caccgtccag atgtcgaaca cccatggccc gcgcgagccg cgttcgattt
     1081 tcgtgatgct ccaggtgttc atgaactcca cgacgctcgt gtctgatttc atctgtcgga
     1141 cccagtcggc gcgacgcacg cgtctctgcc ccttgccgtc gccgaggatc tcgtaggtga
     1201 aggtcgtgtc gtaatcggcg aacgtcgcgt ccaggtcctt tcgtttgaag gcctcgatcg
     1261 ctcgctcgac gacgcgcacc ggcatcgtgt ccgcgggcga ctgcgcgcgg gccgtggcgc
     1321 ccacgcaggt gaggatgatg ctcgcaagca ggatcggtcg tggcatgggg aggccctcca
     1381 gacgtaggtg cgcattcgcc gggaaccgcg ccgagctggt cggcggggcg tcttgaagct
     1441 acgagcaccg gtggacattg ccagcgcagg ctgtcggcac tccggtagcg tcagcccgac
     1501 gtcccacaaa cggcccgtcg ccgtacgccc gacggccatt cgcggcacgc ggcacggtag
     1561 ttcgcggcac gccgcacggc cgctcgcggc acggccgttc gccgcacgcc gcacggccgt
     1621 tgggaccact caccaaaccc cctcggccag tccatacttt cgcaccccca cctgcgagcc
     1681 catgtccccc ttcctggctg agctgctcgg caccgcgatc ctgatcgtcc tcggcgacgg
     1741 cgtcgtcgcc aacgtcgtgc tcgcccgcac caaggggcag ggctcgggct ggatcgtcat
     1801 caccgccggc tgggcgttcg ccgtcacgat cgccgtctac tgcgtgaacg cgatcagcgg
     1861 cgcgcacctc aacccggccg tgacgatcgc cctcgccgcg atcggcagct tcccgtgggc
     1921 caaggtgccg gcgtacatcg ccgcgcagat catcggcggg ttcatcggcg cggtgatcgt
     1981 ctggctcgcg tatctcccgc acttcgccgc cacggccgac gccgagtcca agctcgccgt
     2041 cttctccacg acgccggcga tccggcagcg ctacgcgaat ctcgcggccg aggtgatcgg
     2101 cggattcgcc ctcgtgctcg cgctcctcgc cgtgctgtcg ccgggcaact tcgtgccggg
     2161 ctccgacctc gcgaaggggt tcgggccgat cctcgtcggc gtcatcgtat gggccatcgg
     2221 gctgtcgctc ggcggaccga cgggttacgc gatcaacccg gcgcgcgacc tcggcccccg
     2281 gctcgcccat gccgtcctcc ccatcgcagg caagggcggc tccgactggg gctacgcgtg
     2341 gatcccaata gtcgggccga tcgtgggcgg ggtg
//
LOCUS       DASSYW010000547         3003 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1074567, whole genome shotgun sequence.
ACCESSION   DASSYW010000547 DASSYW010000000
VERSION     DASSYW010000547.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3003)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3003)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3003
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1074567"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            135..335
                     /locus_tag="VFN38_08725"
     CDS             135..335
                     /locus_tag="VFN38_08725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011885.1"
                     /translation="MATKLDKSIKRELEHNGKLYTITIAPDGVKVVEKGKRNGPHVSW
                     SSIISGDTTLNENLNISVDASR"
     gene            complement(339..614)
                     /locus_tag="VFN38_08730"
     CDS             complement(339..614)
                     /locus_tag="VFN38_08730"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HET9011886.1"
                     /translation="MRRYVEAGLADQRAGTALPFELLQVRRVDLKTSALNARSRAAIL
                     RLGATEEGTLRKHMINEDGSARDSVYFSITDDEWPRVRARLEEQLRR"
     gene            complement(627..758)
                     /locus_tag="VFN38_08735"
     CDS             complement(627..758)
                     /locus_tag="VFN38_08735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011887.1"
                     /translation="MNLAPPVLEGCVVRLVPLTLDHVEPLCAVGLDPSLWALTTVRV"
     gene            complement(755..1060)
                     /locus_tag="VFN38_08740"
     CDS             complement(755..1060)
                     /locus_tag="VFN38_08740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011888.1"
                     /translation="MRPHFLAFRRTLPGGMIVLVSLAIDTEGVVHGMLQVERRLDPTR
                     QLFDTAPIVARAEGTSKDDVLKKLRTLAENDAELAAKLAEWEALHPSHRKPGESYRP"
     gene            1184..1852
                     /locus_tag="VFN38_08745"
     CDS             1184..1852
                     /locus_tag="VFN38_08745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011889.1"
                     /translation="MKKVLVVDIGGSHVKLFRTGHRGRVKLPSGPTLTPREMVREVLD
                     ATDGWQYDVVTIGYPGPVVRGKVAREPINLGRGWTKFNFARAFGRPVRLINDAAMQAL
                     GSYRGRSMLFLGLGTGLGTTLVRNGVVVPLEVAHLPYRDGKTFEEFVGDAGLKALGRK
                     RWRRHVEIVVGLMLEALVADYAVLGGGNVRLLDELPPRTRRGNNANAFRGGERLWQDE
                     VTCT"
     gene            1849..>3003
                     /locus_tag="VFN38_08750"
     CDS             1849..>3003
                     /locus_tag="VFN38_08750"
                     /inference="COORDINATES: protein motif:HMM:NF020701.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011890.1"
                     /translation="MSDPTGNARRPAVGGPGNEPRWTSSAKSGVGTALDSRSRIWFTI
                     SHGIVDEVYYPRIDQANTRDFGFLVTGPNGFFSEEKRDTESTLHLLDAGVPGYRLVNR
                     CSQSRYEIEKTIITDPERAVLLQRVRFRALVGVPTDYRVFALIAPHIGNQGYGNDGWV
                     DSYKGIPMLFARRADVSLAVMCSVGWRAASAGYVGVNDGWRQVKKAGSLTDQFTEARD
                     GNVALTAEVGLEARHRQSDDPAVAEFVVALAFGGGPAEAAQRARMTLASQFDRVQASY
                     VRNWSRFHEHTHGPATSEKLTNPEESRRRAKSDLAAHAHESTKAHEEKPKHRERRKRT
                     PVEMPESVVDLYRMSAAVLAIHEDKSASGAMIASLSIPWGHSKGDHELGGY"
BASE COUNT          488 a         1013 c         1075 g          427 t
ORIGIN      
        1 gggttggaag ggacatagcg cacgagcggc gtcacgctct gccgatgtgc ccggtgtcac
       61 aacccccggc ctagcttcgc attccccact ccgatagctt cgccttcaga tacccaactc
      121 tccttcgagg aaccatggcg accaaactgg acaagtcgat caagcgcgag ctcgagcaca
      181 atggcaagct gtacacgatc acgatcgcgc ccgatggcgt gaaggtcgtg gagaagggca
      241 agcgcaacgg cccgcacgtc agctggtcgt cgatcatcag cggcgacacg acgctgaacg
      301 agaacctgaa catctcggtg gacgcgtcgc gctgagcctc agcgcctgag ctgttcctcg
      361 agccgggcgc gcacgcgggg ccattcgtcg tcggtgatcg agaagtacac ggaatcccgc
      421 gccgagccat cctcgttgat catgtgcttc cgcagcgtgc cctcctccgt ggcgccgagg
      481 cggaggatgg cggcgcggga gcgcgcgttg agcgcgctcg tcttgagatc cacgcggcgc
      541 acctgaagca gctcgaaggg gagtgccgtg ccggcgcgct ggtcggcgag ccccgcttcc
      601 acgtagcggc gcatgtcgtc ggcgttctag acgcgcaccg tcgtgagcgc ccagagcgag
      661 gggtccagcc ccacggcgca cagcggctcc acgtgatcga gcgtcaacgg caccaggcgc
      721 accacgcatc cctcgagcac cgggggggcg aggttcacgg ccggtaggac tctcccggct
      781 tgcggtgcga cgggtgcagc gcctcccact cggccagctt cgccgccagc tccgcgtcgt
      841 tctcggccag ggtgcgcagc ttcttcagga cgtcgtcctt ggacgtcccc tcggcgcgcg
      901 cgacgatcgg cgccgtgtcg aagagctgtc gggtgggatc gagccgtcgc tcgacctgga
      961 gcatcccgtg caccacgccc tcggtgtcga tcgcgaggga gacgagcacg atcattccac
     1021 cggggagggt gcggcggaag gccaggaagt gggggcgcat gatgcaaagc tcgtcggccc
     1081 ggcgcgctgg cgcaaaccgt gcgaacgcct cgcgccgtcg ggcgacatgt cgcatcctca
     1141 tgcacgtcgc cggtcccacc gttccccgtc gcccgctccc cccgtgaaaa aagtcctcgt
     1201 cgtcgacatc ggcggatcgc acgtgaagct gtttcgcacc gggcaccgcg gccgcgtgaa
     1261 gctcccatcc ggccccacgc tgacgccacg cgagatggtg cgcgaggtgc tcgacgcgac
     1321 ggacggctgg cagtacgacg tcgtgacgat cggctatccg ggacccgtcg tgcgcggcaa
     1381 ggtcgcccgc gagccgatca acctcgggcg gggctggacg aagttcaact tcgcccgcgc
     1441 cttcggccgt ccggtgcggc tgatcaacga cgcggccatg caggcgctcg gcagctaccg
     1501 cgggcggagc atgctcttcc tcggcctcgg cacggggctc ggcacgacgc tcgtgcgcaa
     1561 cggcgtggtg gtgccgctcg aggtggcgca cctgccgtat cgcgacggca agacattcga
     1621 ggagttcgtc ggcgacgcgg ggttgaaggc gctcggccgg aagcggtggc ggcggcacgt
     1681 ggagatcgtc gtcgggctga tgctcgaggc gctcgtcgcc gactatgcgg tgctgggcgg
     1741 cgggaacgta cgcctgctcg acgagctgcc cccgcgcacc cggcggggca acaacgccaa
     1801 cgccttccgt ggcggcgagc ggctgtggca ggacgaggtg acctgcacgt gagcgatccg
     1861 acagggaacg cgcggcggcc ggccgtcggc gggccgggca acgagccgcg gtggacctcg
     1921 agcgccaaga gcggcgtggg cacggcgctc gactcgcgca gccggatctg gttcaccatc
     1981 tcccacggca tcgtggacga ggtgtactac ccgcgcatcg accaggcgaa cacgcgcgac
     2041 ttcggctttc tcgtcacggg accgaacggg ttcttctcgg aggagaagcg cgataccgag
     2101 agcacgctgc acctgctcga cgccggcgtc cccggctatc ggctggtgaa ccggtgctcc
     2161 cagtcccgct acgagatcga gaagacgatc atcaccgatc cggagcgcgc agtgctgctg
     2221 cagcgcgtgc gctttcgcgc cctggtcggc gtgccgacgg actatcgcgt gttcgccctc
     2281 atcgcgccgc acatcggcaa ccagggctac ggcaacgacg gctgggtgga cagctacaag
     2341 ggcatcccca tgctgttcgc gcgtcgggcc gacgtgtcgc tcgccgtgat gtgcagcgtc
     2401 ggctggcgcg ccgcgagcgc ggggtacgtg ggcgtgaacg acggctggcg ccaggtgaag
     2461 aaggcgggct cgctgacgga ccagttcacc gaggcgcgtg acggcaacgt cgcgctcacg
     2521 gcggaggtgg ggctcgaggc caggcaccgg cagagcgacg atcccgcggt cgcggagttc
     2581 gtcgtcgccc tcgccttcgg gggcgggccg gccgaggcgg cccagcgggc gcggatgacg
     2641 ctcgcgtcgc agttcgaccg ggtgcaggcg tcgtacgtgc gcaactggtc gcgctttcac
     2701 gagcacaccc atggcccggc tacctcagag aagctgacga atcctgaaga gtcgcggcgg
     2761 cgcgccaaga gcgacctcgc ggcgcacgcg cacgagagca cgaaggcgca cgaggagaag
     2821 ccgaagcacc gggagcggcg gaaacgcacg ccggtggaga tgccggagag tgtggtcgat
     2881 ctgtaccgca tgagcgccgc agtgctcgcg atccacgagg acaagagcgc gagcggcgcc
     2941 atgatcgcca gcctctccat cccgtggggg cacagcaagg gcgaccacga gctgggcggc
     3001 tac
//
LOCUS       DASSYW010000548         2297 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1289724, whole genome shotgun sequence.
ACCESSION   DASSYW010000548 DASSYW010000000
VERSION     DASSYW010000548.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2297)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2297)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2297
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1289724"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            120..1889
                     /locus_tag="VFN38_08755"
     CDS             120..1889
                     /locus_tag="VFN38_08755"
                     /inference="COORDINATES: protein motif:HMM:NF037660.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat-containing protein
                     kinase family protein"
                     /protein_id="HET9011891.1"
                     /translation="MYALGVLLYVLLSGHHPAGRDVGSPATLLRAIVVTEPDRVSDSA
                     SSGDGAQDRARQRGTTATRLRRALRGDLDLIVAKALKKNPADRYASVTALADDLRRFL
                     RREAIAARPATVRYRTAMFVRRHAGSVAAAVLGALLVVGLIALHTTRLAAERDRAQRE
                     AAKALKVSELLMRVLTSADPYAPRAGSGEPTVRALLDAGAQQVQKELAGEPELRAEML
                     TAMGRTYRRLGVYDTAQQLLETALADGEKAFGAEDLHVGQTLQTLGVVLADKGDYVAA
                     GQSLERALRIQRNRLGPEHADVAVTLVELGRVYQDQGRNDRAETLQGEALEIRRRVLG
                     EEHRETAVSRNDLASVLRLNGHLSAAETLLRQALETNRKTRGEDHPNTATTMHDLAVV
                     EASRGNFHSAESLILQALPRQRKALGDRHPVVAASLNSLAHVLMQQRRYEEAAAALQE
                     ALAIARGALGRDHQLVAIYTINLGAVRLVERQPAAAEALLRAGLRVRSLAPGIVPSRR
                     RTFREDDWSLAATKSLLGASLAALGRQDEADALLLEARRDLDALPAARSAEMKAAIGR
                     LVELYLPWGRQERAAVSRALLGF"
     gene            2000..>2297
                     /locus_tag="VFN38_08760"
     CDS             2000..>2297
                     /locus_tag="VFN38_08760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011892.1"
                     /translation="MILPFIAGFAAAVQAQDRITPPAVPADIAVEDGYSPFLRGHAVG
                     TQNYICAPASTPSGRDWLFIGPQATVFDDYGQQILTHFQSTNAFNANAIEATWQH"
BASE COUNT          375 a          790 c          804 g          328 t
ORIGIN      
        1 gctggcgtag cgcgagcgcg gagacgagcg cgctctcgag ggaaataggc gcggcgatga
       61 cgccagagta cgccgccccc gagcagctgt ccggtggaga aatcacgacc gcgacggacg
      121 tgtacgcgct cggggtgctc ctgtatgtgc tgctgagcgg gcaccacccc gccggccgcg
      181 acgtcgggtc gcccgccacg ttgctgcgcg ccatcgtcgt caccgagccg gaccgcgtct
      241 ccgacagcgc ctcgtctggc gacggggcgc aggaccgggc gaggcagcgc ggcacgacgg
      301 cgacgcgcct gcggcgcgcg ctgcgcggcg atctcgacct cattgtcgcg aaggcgctca
      361 agaagaaccc cgccgaccgc tacgcgtcgg tgacggcgct cgcagacgat ctgcggcggt
      421 ttctgcgccg cgaggcgata gccgcacgcc ccgcgacggt gcgttaccgg actgcgatgt
      481 tcgtgcgccg tcacgccggc agcgtcgcgg cggccgtgct cggcgcgctg ctggtcgtcg
      541 gtctcatcgc gctccacacg acgcggcttg cagccgagcg cgatcgggcg cagcgcgagg
      601 ccgctaaagc gttgaaggtc agcgagctgc tcatgcgcgt cctcaccagc gccgacccgt
      661 atgcgcctcg cgccggttcc ggcgagccca cggttcgcgc gctgctcgat gccggggcgc
      721 agcaggtgca gaaagaactc gccggggaac ccgaactcag ggcggagatg ttgaccgcga
      781 tggggcggac ctatcgccgc ctgggggtct atgacacggc gcagcagctg ctcgaaaccg
      841 cgctcgccga cggagagaaa gcgttcggcg ccgaggacct gcacgtcggg cagacgctgc
      901 agacgctggg agtcgtgctc gcggacaaag gcgactacgt tgccgccggg cagagtctcg
      961 aacgtgcgct gcgcatccag cgcaatcgcc tcggacccga acacgccgat gtggccgtca
     1021 cgctggtaga gctcgggcgc gtctaccagg atcaggggcg caacgaccgc gccgagaccc
     1081 tccagggaga ggcgctggaa atcaggcggc gcgtgctcgg cgaggagcac agggaaaccg
     1141 cggtcagccg caacgatctc gcctccgttc tgcgcttgaa cggccacctc tccgctgccg
     1201 aaacgctgct caggcaggca ctggagacga atcgaaaaac gcgcggagaa gatcacccca
     1261 acacggcgac gacgatgcac gacctcgcgg tggtcgaggc gagccgtggg aatttccact
     1321 cggccgaatc gctgatcctt caggcgctcc cgcggcagcg gaaggcgctg ggcgacaggc
     1381 accccgtcgt cgcggcgtcg ctcaacagtc tggcgcacgt gttgatgcag cagcggcgct
     1441 acgaggaagc ggcggccgcc ctgcaggagg cgctggcgat cgcgcgcggc gcgctcggac
     1501 gcgatcacca gctggtggcg atctacacga tcaatctcgg cgcggtgcgg ctcgtcgagc
     1561 ggcagcccgc ggccgccgag gcgctccttc gcgcggggct gagagtccgc tcgctggccc
     1621 ccggaatcgt gccctcgcgg cgccgcacgt tccgcgagga cgactggagt ctcgcggcga
     1681 cgaaaagcct gctcggggcg tcgctcgcgg cactggggcg ccaggatgaa gcggatgccc
     1741 tcctgctgga agcacgccgg gatctggatg cgctgcccgc ggcgcgcagc gcggaaatga
     1801 aggccgccat cggccgcctc gtcgagctgt acctcccgtg gggccggcag gagcgcgccg
     1861 ccgtctcgcg ggccctgctc gggttttagc caagcgccgc tctcctgtcg tcttcctcct
     1921 ccggattccg attctccaga cagacactca cgtctactca cggaaggaga ccgacgccat
     1981 gtcttggaag agaagtgtgt tgatcctgcc gttcatcgcg ggcttcgcgg ccgcggtgca
     2041 ggcccaggat cgaattaccc cgccggccgt tccagcggac atcgctgttg aagatggata
     2101 ttcaccgttt ctgcgcggac acgcggttgg aacgcagaac tacatctgcg cgccggcgtc
     2161 gaccccgtcg ggccgggact ggctgttcat cggcccgcag gcgacggtgt tcgacgacta
     2221 cggccagcaa atcctgactc atttccagag cacgaacgcc ttcaacgcga acgccatcga
     2281 agccacgtgg cagcact
//
LOCUS       DASSYW010000549         3902 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_864062, whole genome shotgun sequence.
ACCESSION   DASSYW010000549 DASSYW010000000
VERSION     DASSYW010000549.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3902)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3902)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3902
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_864062"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(142..2118)
                     /locus_tag="VFN38_08765"
     CDS             complement(142..2118)
                     /locus_tag="VFN38_08765"
                     /inference="COORDINATES: protein motif:HMM:NF019351.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HET9011893.1"
                     /translation="MPLPVLVGCALLCAAPPPLAPRPPATPREVAVANDNRLPAGSLR
                     GGVLTLRLEVRSGVWRPESDSGGALEVQAFAESGGPLRIPGPLIRVPVGTEIRATLHN
                     TLRDSALVVHGLGNGSTHGDSGLRVAPGETRDVRFVVRKPGTFYYWGSTTGRGIEDRE
                     WLDSQLNGAIVVDPPGAPQNDRTFVLGMWIRSADSSGPAPRPRREILTINGKSWPFTE
                     RFTYAVGDSVRWRWINPTRSTHPMHLHGFYFRVDSRGDGVADSLLPADRRSLEVTELM
                     GVGQTMTMQWRAATEGNWVFHCHFAFHVSHHVVIDEPPPPGSDSGATHAAGTPMSSLA
                     AHTGMGHDDMARSRAPVAGPHRMAGLVLGLHVVRPGRPSYAATANNDAGAARPMRLTV
                     QMRAKRFGARPGYGFVLQDGASEAKGDSIDIPGSLLLLRRGEPVRITVVNRLRASTAV
                     HWHGLEIQSFPDGVPGWSGTPGRLLAPIAPGDSFVASFTPPRAGTFIYHTHADELEQM
                     RGGLYAPLVVTDSAHPFDPAVDKLVVVGGGGPPLTEDDPPPVFVNGSPEPAPLQLRVG
                     STYRLRLINIEPDWRVQFALTSDTALLRWRPIAKDGADLPPALAVEGPAFLLTGPGET
                     ADFEFTPTRSGALRLEVKSRVPGWYIPLPIVVRP"
     gene            2254..3312
                     /gene="queA"
                     /locus_tag="VFN38_08770"
     CDS             2254..3312
                     /gene="queA"
                     /locus_tag="VFN38_08770"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HET9011894.1"
                     /translation="MSDHLAPGTRTADFDFELPPHLVAQTPAARRDESRLMVVDRSRG
                     TIEHRRFRDLAEMIPAGDALVLNTTRVLRARLLGQRDSGAPAEVFLLKALPERGEGVF
                     EAMVRPGGKVRPGRVVHVAPELEVEVLEITDRRTRIVRLRTPLEVGAAIERFGHVPLP
                     PYIARGDEGGDVERYQTVYARETGSVAAPTAGLHFTPELLERLERRGVRRVDVLLHVG
                     AGTFKPVEVDDLAQHVMHEEWYDLPAAAAATLNATRDAGGAVWAVGTTSCRTLESAVG
                     EDGRFAARSGETRIFIRPPHRFRAVDKLVTNFHLPRSTLIMLVAAFAGYELTMRAYRE
                     AIDAGYRFYSYGDAMLLL"
     gene            3326..3751
                     /locus_tag="VFN38_08775"
     CDS             3326..3751
                     /locus_tag="VFN38_08775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011895.1"
                     /translation="MVSARRARVALAGALLLAGAGCVTTTTTAYLPTPGQPRLTVDDA
                     RDEIDALLRAECPRLMQEGKPSQVAHVTVDVSSAGDVASARLTTSSGDAQMDKIFGGV
                     AARLHFQASGEMKGPTAPGRLRMGYSCSGQAAVATIELL"
BASE COUNT          551 a         1364 c         1461 g          526 t
ORIGIN      
        1 cgatggacgc gtcctagcga ccgtcattct cactcgtcgc caacgagcga ggcgcgctcc
       61 cggtcgggaa gcgcgcctcg ctcatcatcc tccgcgcacg ttcgtctcga cggccggcga
      121 cgcgtcgcga ccgccgccgg atcagggtcg cacgacgatc ggcagcggga tgtaccagcc
      181 cggcacgcgc gatttcactt cgagccggag cgcgcccgac ctcgtcggag tgaactcgaa
      241 gtccgccgtc tcgcccggcc cggtgaggag gaacgcgggc ccctcgacgg cgagcgcggg
      301 gggcaggtcc gcgccgtcct tcgcgatcgg gcgccagcgc agcaacgccg tgtccgacgt
      361 cagcgcgaac tgcacgcgcc aatccggctc gatgttgatg aggcgcaggc ggtacgtgct
      421 tccgacgcgc agctggagcg gcgcgggctc ggggctgccg ttcacgaaga cgggaggcgg
      481 atcgtcttcg gtgagcggcg gtccgcctcc gccgacgacc accagcttgt ccaccgcggg
      541 atcgaagggg tgcgccgagt cggtgacgac gagcggtgcg tacagcccgc cgcgcatctg
      601 ctccagctcg tccgcgtgcg tgtgatagat gaacgtgccc gcgcgagggg gcgtgaagct
      661 ggcgacgaac gagtcgccgg gcgcgatcgg ggcgagcaac cgcccgggcg ttccgctcca
      721 gccgggcacg ccgtcgggga agctctggat ctccagtccg tgccagtgca ccgccgtgga
      781 cgcccggagg cggttgacga cggtgatccg caccggctcg ccgcgacgca gcaggaggag
      841 cgagcctgga atgtcgatcg agtcgccctt cgcttccgag gcgccgtcct gcagaacgaa
      901 tccgtagccg ggcctcgcgc cgaagcgctt cgcgcgcatc tgtacggtca ggcgcatcgg
      961 ccgcgcggcg ccggcgtcgt tgttggcggt cgcggcgtac gagggcctgc cgggccgcac
     1021 gacgtgcagg ccgagcacca gtcccgccat gcggtgcgga ccggcgacgg gcgcgcgcga
     1081 ccgcgccatg tcgtcgtgcc ccattccggt atgcgcggcc agggaagaca tcggcgttcc
     1141 ggcggcgtgg gtcgcgccgc tgtcgctacc cggcggcggg ggctcgtcga tcacgacgtg
     1201 gtgcgagacg tggaacgcga agtggcagtg gaagacccag ttcccctcgg tggccgccct
     1261 ccactgcatc gtcatcgtct ggccgacccc catcagctcc gtcacctcga gtgaccggcg
     1321 gtcggcgggg aggagcgagt cggcgacacc atcgccgcgg ctgtccaccc ggaagtagaa
     1381 gccgtgcagg tgcatcgggt gcgtgctgcg ggtcgggttg atccaccgcc agcggacgct
     1441 gtcgcccacc gcgtaggtga accgctcggt gaacggccac gactttccgt tgatcgtcag
     1501 tatctcgcga cgggggcgcg gcgccggtcc ggacgagtcg gcggaccgga tccacatgcc
     1561 gagcacgaag gtgcggtcgt tctgcggagc gccgggcgga tccaccacga tcgcgccgtt
     1621 gagctggctg tcgagccact cgcggtcctc gatcccgcgg ccggtcgtgc tcccccagta
     1681 gtagaaggtg ccgggcttcc tgacgacgaa gcgcacgtcc cgcgtctcgc cgggcgcgac
     1741 gcgcaggccc gagtcaccgt gcgtcgaccc gtttccgaga ccgtgcacga cgagcgcgga
     1801 atcgcgcagg gtgttgtgga gggtcgcgcg gatctcggtg ccgaccggta cgcgaatcag
     1861 cggacccggt atgcggagcg gcccgcccga ctcggcgaat gcctgcacct cgagcgcgcc
     1921 ccccgagtcg gactccgggc gccagacgcc ggagcgcacc tcgaggcgaa gggtgagcac
     1981 gccgccgcga agcgacccgg cggggaggcg gttgtcgttc gcgaccgcca cctcgcgggg
     2041 agtcgcgggc ggacgggggg cgagcggagg cggggcggcg cacaacagcg cgcagccgac
     2101 gagcacgggg agcggcatgg tacctccacc agcagggagg gacacctggc gctctacgtc
     2161 gggcgcgatg ggagcaggcg accacgttaa gagttttcca atgttcgtca aggaaacgcg
     2221 tggtcgcccc cggccgacga ttaacttgcg cgcgtgagcg atcacctggc cccgggcacc
     2281 cgcaccgccg acttcgactt cgagctcccg ccgcacctcg tcgcgcagac gccggccgcg
     2341 cggcgcgacg agagccgcct gatggtggtg gaccgctcgc gcggcacgat cgagcaccgg
     2401 cgcttccgcg acctggcgga gatgatcccg gccggcgacg cgctggtgct caacacgacg
     2461 cgcgtgctgc gggcgcggct gctcggacag cgcgactcgg gggcgccggc cgaggtcttc
     2521 ctgctcaagg cgctgccgga gcgcggcgag ggggtgttcg aggcgatggt gcggccgggc
     2581 ggcaaggtgc gccccgggcg cgtcgtgcac gtcgcccccg agctcgaggt cgaggtgctc
     2641 gagatcaccg accggcggac gcgcatcgtg cgcctgcgga cgccgctcga ggtgggcgcg
     2701 gcgatcgagc gcttcgggca cgtgccgctc cccccgtaca tcgcgcgcgg ggacgagggg
     2761 ggcgacgtcg agcgctacca gaccgtctac gcgcgcgaga ccggctccgt cgccgcgccc
     2821 acggcggggc tgcacttcac gccggagctg ctcgagcgac tggagcggcg cggcgtgcgg
     2881 cgggtggacg tgctgctgca cgtgggggcg ggcacgttca agccggtcga ggtggacgac
     2941 ctcgcccagc acgtgatgca cgaggagtgg tacgacctgc cggcggcggc cgcggccacg
     3001 ctgaacgcga cgcgcgacgc ggggggagcg gtctgggcag tcgggacgac gagctgccgc
     3061 acgctcgaga gcgccgtcgg ggaggacggt cgcttcgccg cgcggagcgg cgagacgcgg
     3121 atcttcatcc ggccgccgca ccgcttccgg gcggtggaca aactggtcac caattttcat
     3181 cttccgcgct ccaccctgat catgctcgtc gcggcgttcg ccggctacga gctcacgatg
     3241 cgcgcatacc gagaggcgat cgatgccgga taccggttct actcgtatgg cgacgccatg
     3301 ctgctcctct gagacggggc gcctcgtggt gagcgcgcgc cgcgcgcgcg tcgccctggc
     3361 cggcgcgctg ctgctcgccg gcgccgggtg cgtgacgacg acgacgaccg cctacctgcc
     3421 gacgcccggc cagccgcggc tgacggtgga cgacgcgcgc gacgagatcg acgccctgct
     3481 tcgcgccgaa tgtccgcgcc tgatgcagga gggaaagccg agccaggtgg cgcacgtcac
     3541 ggtggacgtg agctccgcgg gcgacgtcgc cagcgcgcgg ctgacgacgt cgagcggcga
     3601 cgcgcagatg gacaagatct tcggcggcgt cgcggcgcgc ctgcacttcc aggcctccgg
     3661 cgagatgaag ggcccgaccg cgcccggccg gctgcggatg ggctactcct gctccggcca
     3721 ggcggcggtg gcgacgatcg aactgctgta agcggggcgt gggacgcggg gcgcggggcg
     3781 cgatgtcctg cgagagcatc tcggcccaca cgctcgacag cgaaacacga taccgcatcc
     3841 cgcgccccgc accccgtttc ttcctgccac ccgtctcttg tccttcgact tcaccatcca
     3901 gt
//
LOCUS       DASSYW010000550         2069 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_657369, whole genome shotgun sequence.
ACCESSION   DASSYW010000550 DASSYW010000000
VERSION     DASSYW010000550.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2069)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2069)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2069
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_657369"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2069)
                     /locus_tag="VFN38_08780"
     CDS             complement(<1..>2069)
                     /locus_tag="VFN38_08780"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HET9011896.1"
                     /translation="KTGLPLAKAPLLARGQDDKTRATLTDEQGAFQLYLPPGAYTLRS
                     YYNLYHGVRMEHVRVARGAFTSARLVLDPIDVNQDIAVVEIEIPYRADTTTIAAQDQL
                     RKEARGIGEGMGAQQMSQQGAGDAAAAARRVVGVTIESNQLVIRGLGGRYVRVFLNGL
                     PIPNTDPDFPSVDLDLFPTTVIDNLNVQKVFLPEIPADFAGGVLDINTVSFPRKLLVS
                     ASVGGAYNSQTTGKGVHSYRGGGTDWLGFDDGTRGLPDAVKGVKLTPATIRGDGLPPA
                     ELDAAGRTFQNRWNTRTAAGLPQFGFNVTVGNSINFANKKRFGFLASLVYDYALERLV
                     GTSHPRPAISDTGELQAINSYRLESGNESVQLSAIGTASLDLGVDHSLTLLSLYNRSM
                     DDQTRFRTGTNADYGMGPYDNWQLRFLARTIWVNQLLGDHRNLGGTRLRLRWSTFYAL
                     GRRDEPDQRVVKYGFYSGGERRWIPTADRLWSDLNQTDVGATAQLRFPLWAEAWGTVG
                     GRIGQSDRDFSNRRFIYQMGRTPMPAAYTADPETLFSPENVGPLVTVLDFTKPNDSYT
                     ASQRNYAGFLMLETPIVGRLSASGGARLEVFEQTVQPRSPFAEDNTPEFLAMSRTNRT
                     DTNVLPGAALKYAVNDAMLLRAAYGLTVSRPQVRELAPYDYYDFLRDRKIIGNPDLKT
                     ATIHNAD"
BASE COUNT          303 a          676 c          735 g          355 t
ORIGIN      
        1 gtcggcgttg tggatcgtcg ccgtcttgag gtcggggttg ccgatgatct tccggtcgcg
       61 gaggaagtcg taatagtcgt agggcgccag ctcgcgcacc tgggggcggc tgaccgtcag
      121 gccgtaggcg gcgcgcagca acatcgcgtc gttgacggcg tacttcagcg ccgcgcccgg
      181 aagcacgttg gtgtccgtcc ggttcgttcg gctcatcgcc aggaactcgg gcgtgttgtc
      241 ctcggcaaac gggctgcgcg gctgcacggt ctgctcgaag acctcgaggc gcgcgccgcc
      301 cgacgccgac agccggccga cgatcggcgt ttccagcatg aggaagcccg cgtagttgcg
      361 ctgcgacgcc gtgtagctgt cgttcggttt ggtgaagtcg aggacggtca ccagcggccc
      421 gacgttctcc gggctgaaca gcgtctcggg atcggcggtg tacgccgccg gcatcggcgt
      481 ccgccccatc tgatagatga agcgccggtt cgaaaaatcg cgatcggatt ggccgatgcg
      541 cccgccgacc gtcccccagg cctcggccca cagcgggaag cgaagctggg cggtcgcgcc
      601 cacgtccgtc tgattgaggt cgctccacag acgatccgcg gtcgggatcc agcggcgctc
      661 gccgccgctg tagaagccgt acttgaccac gcgctggtcg ggctcgtcgc ggcggcccag
      721 cgcgtagaag gtgctccagc gcaggcgcag ccgcgtccca cccaggttcc ggtgatcgcc
      781 cagcagctga ttgacccaga tcgtgcgggc gaggaagcgg agctgccagt tgtcgtacgg
      841 ccccatgccg tagtccgcgt tggttccggt gcggaagcgg gtctggtcgt ccatgctgcg
      901 gttgtaaagg ctgagcagcg tcagcgagtg atcgacgccg aggtcgaggc tcgccgttcc
      961 gatcgccgac agctgcacgc tctcgttgcc ggactccagc cggtacgagt tgatcgcctg
     1021 cagctctccc gtgtccgaga tggcgggccg cggatggctg gtgccgacca gccgctccag
     1081 cgcgtagtcg tagaccagcg aggcgagaaa cccgaagcgc ttcttgttcg cgaagttgat
     1141 cgagttgccg acggtgacgt tgaaaccgaa ctgcggcagc cccgcggccg tgcgggtgtt
     1201 ccaccggttc tggaaggtcc ggcccgccgc gtccaactcg gcgggcggca gcccgtcacc
     1261 gcggatggtc gccggcgtca gcttgacgcc cttcacggcg tcgggcagcc cgcgcgtacc
     1321 gtcgtcgaag ccgagccagt cggtgccgcc gccccggtag ctgtggacgc cttttcccgt
     1381 ggtctgcgag ttgtacgctc cgcccacgct ggcgctgacc agcagcttgc gcggaaagct
     1441 gaccgtgttg atgtcgagaa cgccgcccgc gaagtcggcg gggatctcgg ggaggaacac
     1501 cttctggacg ttgaggttgt cgatgacggt ggtcggaaac agatccagat cgacgctggg
     1561 aaaatcggga tcggtgttcg ggatcggcag gccgttcagg aacacgcgca catagcggcc
     1621 gcccaggccg cggatgacca gctggttgct ctcgatcgtc acaccgacga cccggcgggc
     1681 ggccgccgcg gcgtcgcccg cgccttgctg cgacatctgc tgcgcgccca tgccctcgcc
     1741 gatgccgcgc gcctccttgc gcagctgatc ctgcgccgcg atcgtcgtgg tgtcggcgcg
     1801 ataggggatc tcgatctcga ccaccgcgat gtcctggttg acgtcgatcg gatccagcac
     1861 cagacgcgcg ctggtgaacg cgccgcgggc gacgcggacg tgttccatgc gcacgccgtg
     1921 atagaggttg taataggaac gcagcgtgta agctccgggc gggaggtaga gctgaaacgc
     1981 gccctgctcg tcggtgaggg tggcgcgcgt cttgtcgtcc tgcccgcgcg cgaggagggg
     2041 cgccttcgcc agcggcaacc ccgtcttgc
//
LOCUS       DASSYW010000551         2870 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_554963, whole genome shotgun sequence.
ACCESSION   DASSYW010000551 DASSYW010000000
VERSION     DASSYW010000551.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2870)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2870)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2870
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_554963"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..980)
                     /locus_tag="VFN38_08785"
     CDS             complement(<1..980)
                     /locus_tag="VFN38_08785"
                     /inference="COORDINATES: protein motif:HMM:NF024981.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bile acid:sodium symporter family protein"
                     /protein_id="HET9011897.1"
                     /translation="MRRAVDWFTAGMAIAVGLAWLFPDPGAPGGVLHPELLTKLGVAL
                     IFFLHGVSLSFAALKEGTMRWPLHLVVQSCTFLLFPIFGLALLWIAGDAIAPDLRLGF
                     FFLCALPSTVSSSVALTAAARGNVPAAVFNATLSSLIGVFITPLWVGWMLKSGGTSMP
                     MGAVVLDLVRWLVMPLVLGQLLRPLLGAWAARHRKRINVVDRLTILLLVYTSFCDSVK
                     RGVWSAHGPGPVLVTIAGALILFFAVMTVAGLACDALRFSPPDRIAAIFCGSKKTLAS
                     GVPMAQLIFAGRPGLGLILLPIMIYHPLQLLICGALANRWARRSDAGELEA"
     gene            complement(977..2191)
                     /locus_tag="VFN38_08790"
     CDS             complement(977..2191)
                     /locus_tag="VFN38_08790"
                     /EC_number="3.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF021778.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052689 - carboxylic ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lactonase family protein"
                     /protein_id="HET9011898.1"
                     /translation="MMPESPLSRRSFLSAAAAGALGLRAMRSCATGGAGGGGGSADRV
                     LYVGTYTTGGRSAGIYMLRMARETGALHGLEPVATTENPSFLAAVPSGRAIYAVNEVA
                     EYGGKPTGTVSAFARDPETGALTPLDRRSSQGAAPCYVTLDRGGRFLLVANYGGGSVA
                     VLPIRAGGGLGDATAVVRHAGHGADPKRQGAPHAHCIVPDPANRFLLVADLGLDRILV
                     YGFDERAGTLSPAPVAQGALAPGAGPRHLVFHPGGRAVYVTNELDSTVTTFRYHPDTG
                     ALDPVQTISTLDAPSAQRNAPADVHVHPSGRFLYLSNRGADGIAAFAIDPATFMLRPL
                     QHVSTEGAWPRNFALDPDGRFLLVANQRADAIVVLRVDGESGRLTSTGERIALPAPTC
                     IRFVDESAGAWR"
     gene            complement(2229..>2870)
                     /locus_tag="VFN38_08795"
     CDS             complement(2229..>2870)
                     /locus_tag="VFN38_08795"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HET9011899.1"
                     /translation="MMVLQQVVERVAGTTLDSLLAQRVFGPLGMRDTGFNPSESLKPR
                     IAPTEIQAFRGDQVWGVVHDENAWAMGGVSGHAGLFSSARDLAVFEQMMLDGGEYNGV
                     RILHPETIARWTARQRKDAARGLGWENPSPRSSAGRYFSPRSFGHTGFTGTSVWADPE
                     KQLFVVLLTNRVDPTRDNPRVGPLRRAIADAVQRAILDAPLRVWEAADTTTAR"
BASE COUNT          430 a          956 c         1138 g          346 t
ORIGIN      
        1 gcctcgagtt cgccagcgtc gctccgtcgc gcccagcgat tggccagggc gccgcagatc
       61 aggagctgca gcgggtggta gatcatgatc ggcagcagga tcagccccag ccccgggcgg
      121 ccggcgaaga tgagctgtgc catcgggacg ccggaggcga gcgtcttctt ggagccgcag
      181 aagatcgccg cgatccggtc ggggggggag aagcgcaggg cgtcgcaggc caggccggcg
      241 accgtcatca cggcgaagaa gaggatcagc gcgccggcga tcgtgacgag caccgggccc
      301 ggcccgtgcg ccgaccagac gccgcgcttc accgagtcgc agaaggaggt gtagacgagg
      361 aggaggatcg tcaggcggtc gacgacgttg atccgcttcc tgtggcgcgc cgcccacgcg
      421 ccgagcagcg ggcggaggag ctggccaagg acgagcggca tgacgagcca gcgcaccaga
      481 tcgaggacga ccgcccccat cggcatcgag gtgccgccgc tcttcagcat ccagccgacc
      541 cagagtggcg tgatgaagac gccgatcaga ctcgagagtg tcgcgttgaa gacggcggcc
      601 ggcacgttgc cgcgcgcggc ggccgtgagc gcgaccgacg acgagaccgt ggacgggagc
      661 gcgcagagga agaagaagcc gagccgcagg tcgggggcga tcgcgtcgcc ggcgatccag
      721 aggagggcga ggccgaagat cgggaagagg aggaaggtgc agctctggac gacgaggtgg
      781 agcggccagc gcatcgttcc ttccttgagc gcggcgaagg agagcgagac gccgtgcagg
      841 aagaagatga gcgccacgcc gagcttcgtg agcagctcgg ggtggaggac gccgcccggc
      901 gcgccggggt cggggaagag ccaggcgagc cccacggcga tcgccatccc cgccgtgaac
      961 cagtccacgg cgcgcctcat cgccacgctc ccgccgactc gtccacgaag cggatgcagg
     1021 tgggcgcggg gagggcgatc cgctctccgg tggacgtcag gcgcccgctc tcgccgtcca
     1081 cgcgcaggac gacgatggcg tcggcgcgct ggttggcgac gaggaggaag cggccgtccg
     1141 ggtcgagcgc gaagttgcgc ggccaggcgc cctcggtgga gacgtgctgc agggggcgga
     1201 gcatgaaggt cgccgggtcg atggcgaagg cggcgatgcc gtcggcgccg cgattcgaca
     1261 gatagaggaa gcggcccgag ggatggacgt ggacgtcggc gggcgcgttg cgctgcgcgg
     1321 acggcgcgtc gagcgtggag atcgtctgca ccgggtcgag ggcgcccgtg tcgggatgat
     1381 agcggaaggt ggtgacggtc gagtcgagct cgttcgtcac gtagacggcg cgtcccccgg
     1441 gatggaagac gaggtgccgc gggcccgcgc ccggcgccag cgcgccctgc gcgactggcg
     1501 ccggcgagag cgtgccggcg cgctcgtcga agccgtacac gagaatgcgg tcgagcccga
     1561 ggtcggcgac gaggaggaag cggttcgccg gatcgggaac gatgcagtgc gcgtgtggcg
     1621 cgccctgccg cttcggatcg gcgccgtggc ccgcgtgccg cacgaccgcg gtggcgtcgc
     1681 cgagtccgcc gccggcgcgg atcgggagca cggcgacgct cccgccgccg tagttcgcga
     1741 cgaggaggaa gcgtccgccg cgatcgagcg tcacgtagca gggcgcggca ccctgcgagg
     1801 agcgccggtc gagcggcgtg agggcgccgg tctccggatc gcgggcgaag gcgctcaccg
     1861 tgccggtcgg cttcccgccg tactccgcca cctcgttcac cgcgtagatg gcgcggccgc
     1921 tcgggacggc ggcgaggaag gaggggttct cggtggtggc caccggctcg agcccgtgca
     1981 gcgctcccgt ctcgcgcgcc atccgcagca tgtagatccc cgcgctgcgc ccgccggtgg
     2041 tgtaggtccc cacgtagagg acgcgatcgg cgctcccccc gccccctccc gcgccgccgg
     2101 tcgcgcagct ccgcatggcg cgcaggccga gcgcgccggc ggcggccgcc gagagaaagc
     2161 tgcggcgcga cagcggcgat tccggcatca tgcccgcgac gccgcgacgg cgtcccttcg
     2221 ctcggcggtc agcgcgccgt cgtcgtatcc gccgcttccc agacgcggag cggggcgtcg
     2281 aggatggcgc gctgcacggc gtcggcgatg gcgcggcgca gcgggccgac gcgcgggttg
     2341 tcgcgcgtgg ggtccactcg gttggtgagg aggacgacga agagctgctt ctcggggtcg
     2401 gcccagaccg aggtgcccgt gaagccggtg tggccgaagc tgcgcggcga gaagtagcgg
     2461 ccggcgctcg agcgcgggga ggggttctcc cagccgagcc cgcgcgccgc gtccttgcgc
     2521 tggcgcgcgg tccagcgggc gatcgtctcg gggtggagga tgcggacgcc gttgtactcg
     2581 ccgccgtcga gcatcatctg ctcgaagacc gcgaggtccc gcgcgctcga gaagagcccc
     2641 gcgtgtcccg acacgcctcc catcgcccag gcgttctcgt cgtgcaccac cccccagacc
     2701 tggtcgccgc ggaaggcctg gatctcggtc ggggcgatgc gcggcttgag cgactcgctc
     2761 gggttgaacc ccgtgtcgcg catgccgagc ggcccgaaaa cgcgctgggc gaggaggctg
     2821 tcgagcgtcg tgcccgcgac gcgctccacc acctgctgga gcaccatcat
//
LOCUS       DASSYW010000552         2062 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1681886, whole genome shotgun sequence.
ACCESSION   DASSYW010000552 DASSYW010000000
VERSION     DASSYW010000552.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2062)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2062)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2062
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1681886"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(36..959)
                     /locus_tag="VFN38_08800"
     CDS             complement(36..959)
                     /locus_tag="VFN38_08800"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HET9011900.1"
                     /translation="MTDDPRTGEGAAAPVVGVAPPGYRLPADLRLGEVRLQVADLERS
                     LAYYQQVLGLRVVRRGPASATLAAAGDDTPLVSLHERRGAAPAPPQGLIGLYHFAILL
                     PDRAALGRFVAHLATLGVPAGASDHLVSEALYLRDPDALGIEVYADRSRSAWRATGRQ
                     IRMTTAPLDLPALVSAAEGVPWDGMPAGTRMGHVHLHVGDLEEASRFYHAALGLDRMV
                     WDYPGALFLAAGGYHHHLGLNTWAGAGARPAGDDDARLLEWRLLLREPHAAEARASLE
                     AAGYAVSATDEGWRATDPWGTTLHVIGERAR"
     gene            complement(991..1434)
                     /locus_tag="VFN38_08805"
     CDS             complement(991..1434)
                     /locus_tag="VFN38_08805"
                     /inference="COORDINATES: protein motif:HMM:NF019301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HET9011901.1"
                     /translation="MANRSLLAATPSQQQLGIAILRIVTGAVFAMHGGQKLFVYGFAG
                     VTGAFTKMGIPMPGLMGPFIAVLEFFGGLALVIGLLTRLAALGLAFDMLGAILLVHLA
                     GGFFLPAGYEFALTLFAASLGLVLAGPGALSLDAAIVSRRDHTAP"
     gene            complement(1499..1726)
                     /locus_tag="VFN38_08810"
     CDS             complement(1499..1726)
                     /locus_tag="VFN38_08810"
                     /inference="COORDINATES: protein motif:HMM:NF023510.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3565 domain-containing protein"
                     /protein_id="HET9011902.1"
                     /translation="MKQPITGYHLDDEGHWVAELACGHGQHVRHDPPWQRRPWVITIE
                     GRVEHLGSELDCVRCDRGEPATPWPPGNQPA"
BASE COUNT          317 a          711 c          786 g          248 t
ORIGIN      
        1 cgaccgttcg ctcgcgatcg atgggcgaag ggtaatcagc gtgcccgctc gccgatgacg
       61 tgcagcgtgg tgccccacgg atcggtggcg cgccaccctt cgtcggtggc gctcacggca
      121 tagccggcgg cttcgaggct cgcccgcgcc tcggcggcgt gcggctcgcg aagcagcagc
      181 cgccactcca ggaggcgtgc gtcgtcgtcg ccggccgggc gcgcccccgc cccggcccag
      241 gtgttgagcc ccaggtggtg gtgatagccc cccgccgcca ggaagagcgc ccccggatag
      301 tcccacacca tccggtcgag gccgagggcc gcgtgataga agcgcgacgc ctcctcgaga
      361 tcgcccacat gcaggtgcac gtgacccatg cgagtgccgg cgggcatgcc gtcccacggc
      421 accccctccg ccgccgacac cagcgcgggg aggtcgagcg gcgcggtggt catgcggatc
      481 tgccttccgg tcgcacgcca ggcgctgcgc gaccggtcgg catagacctc gatgcccagg
      541 gcgtcggggt cgcgcaggta gagcgcctcg ctcacgaggt gatcggaggc gccggcgggg
      601 acgccgagcg tcgccagatg cgcgacgaag cggccaagcg ccgcgcggtc gggcagcagg
      661 atggcgaagt ggtacaggcc gatgagcccc tgcggcggcg ccggagccgc gccgcgccgc
      721 tcgtgcaggc tcacgagggg ggtgtcgtcg cccgccgcgg caagggtggc gctcgcgggg
      781 ccgcgtcgaa ccacgcgcag gccgagcacc tgctggtagt aggcgagcga ccgctcgagg
      841 tccgccacct ggaggcgcac ctcacccagc cggagatccg ccggcaggcg gtaacccgga
      901 ggcgcgacgc cgacgacggg cgccgcggcg ccctctccgg tgcgaggatc gtcggtcatt
      961 cgcgagctgc ctcaggcatg gggtgcgacc tcatggcgcg gtgtggtcac ggcgcgagac
     1021 gatggcggcg tcgagcgaga gcgctccggg tccggcgagc acgaggccca gcgaggcggc
     1081 gaagagcgtc agggcgaact cgtatccggc gggcaggaag aagcctccgg cgagatgcac
     1141 gagcaggatg gcgccgagca tgtcgaaggc gagacccagc gcggccagcc gggtgagcag
     1201 cccgatgacg agcgcgaggc cgccgaagaa ctccagcacc gcgatgaacg gtcccatcag
     1261 gcccggcatc gggattccca tcttggtgaa ggcgccggtg acgccggcga acccgtacac
     1321 gaacagcttc tgcccgccgt gcatggcgaa gacggcgccc gtcacgatgc ggaggatggc
     1381 gatgccgagc tgctgctggg acggggtggc tgcgaggagc gagcggttgg ccatcggagg
     1441 tctcccgtga gtgaatgggg tgagcgccgt gctgcatccc ggatgagcaa agacgtcgtc
     1501 acgccggttg attccctggc ggccacggcg tggccggctc cccgcgatcg cagcgcacgc
     1561 aatcgagctc tgagccgaga tgctcgacac gaccctcgat ggtgatcacc caggggcgcc
     1621 gctgccacgg gggatcgtgc cggacgtgct gcccatgacc acaggccagc tcggcgaccc
     1681 agtggccctc gtcatcgaga tggtagccgg tgatcggctg cttcatcgaa tgcgggatcg
     1741 caccgccgtg cggcgcgcac cggcaacggg gccgcaccgc gagacgtcgg aatcgttcat
     1801 cgtcccggaa ggaaacggga aatcatcggc cggggaagct caccggcggg gccgcgaaga
     1861 tgttcgcgcc tgcggctgcg ctgcgccagt cgcgcggccg ctcagcgggg tgcgtccgcc
     1921 tcggtcgcgg cgaacggggg gctcgcgccg gcacgccgct cggcgcgcca gcggcggtga
     1981 tcgtgcagga gcaggatgac gccggccacc gacatgaccg cgccgaggag cgcgaaccgc
     2041 cagtcccgca gggccgcgct ct
//
LOCUS       DASSYW010000553         2594 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1347160, whole genome shotgun sequence.
ACCESSION   DASSYW010000553 DASSYW010000000
VERSION     DASSYW010000553.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2594)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2594)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2594
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1347160"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            78..578
                     /gene="rimI"
                     /locus_tag="VFN38_08815"
     CDS             78..578
                     /gene="rimI"
                     /locus_tag="VFN38_08815"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: protein motif:HMM:TIGR01575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008999 -
                     peptide-alanine-alpha-N-acetyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HET9011903.1"
                     /translation="MPSDTLTIRRCVPTDLERVASIERASFSDPWSFETFSAALALRH
                     LRFLVAEEGGRGRGAQGLAGGGMPPLVGYVVALVMADEGEIADVAVAPAARRRGVARV
                     LMERMTAELMEEGVRALYLEVRESNVAARALYESLGFAQVGRRRGYYQHPSEDALLLR
                     RDLGPD"
     gene            722..1231
                     /gene="ssb"
                     /locus_tag="VFN38_08820"
     CDS             722..1231
                     /gene="ssb"
                     /locus_tag="VFN38_08820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HET9011904.1"
                     /translation="MSRSLNKVTLIGNLGNDPEVRSTTGGNRVATFSLATSRSWNDAS
                     GAKQEKTEWHRCVVWNTKSSQLADIVEKYVKKGDKLYVEGRIEYRQWQDKENQTRYST
                     EINVRELIMLGGGSGGGGRAAGGDFDAEANGARARSAAPAKAKSGAGGEDFEDFPGAL
                     ADEDDDLPF"
     gene            1496..>2594
                     /locus_tag="VFN38_08825"
     CDS             1496..>2594
                     /locus_tag="VFN38_08825"
                     /inference="COORDINATES: protein motif:HMM:NF013630.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HET9011905.1"
                     /translation="MKIPRLGWSLSAAALLTVGSAAVARAQDVRADSATHTVKRGDTL
                     WDLAQTYLGDPYLWPEIYRLNTDQIEDPHWIYPGEILRLPGRAEAAAIAAAADTSLVG
                     RPPVEEPEQPRRVAGPTIFAPRALPRPQRDVESAVPPARVPMGDVLRAPYFDDDNGPG
                     GAGRVLIGFDIPGIQKPNATTNFQLYDRVLMTPPAGSVAAERERFVAYVTGEYVENVG
                     TVVIPTAILQVVRPPREGDAAVVEVVQLYNQLNSDQRVIPLDTAGAGAFQVPEPVPAR
                     LAQTAKVRYIHRDKTVLPSLNYYVLFDLSARDGVRIGDEIQIFRPRTEVKSDIGPAMP
                     EIAIATGQVVRVTPFGATARITAQEQPAIRVG"
BASE COUNT          379 a          879 c          968 g          368 t
ORIGIN      
        1 tcctacggac ggctggccga agcgcaggtg aaatgggagg cggagcatgg ccggccgctt
       61 gccgcccggt gacgagcatg ccgagcgaca cgttgacgat ccgccggtgc gtgccgacgg
      121 atctggaacg ggtggcgtcg atcgagcggg cctcgttctc cgacccgtgg agcttcgaga
      181 ccttctccgc cgcgctggcg ctgcggcacc tgcgctttct cgtggcggag gagggagggc
      241 gggggcgcgg cgcgcagggg ctcgccgggg gtggcatgcc gccgctggtg ggctatgttg
      301 tggcgctcgt catggccgac gagggggaga tcgccgacgt cgccgtcgcg ccggcggctc
      361 gccgtcgtgg ggtcgcccgc gtcctgatgg agcggatgac cgcggagctg atggaggagg
      421 gggtgcgggc cctctatctt gaagtgcggg agtcgaacgt ggccgcgcgg gcgttgtacg
      481 agtcgctcgg cttcgcgcag gtggggcgcc ggcgggggta ctaccagcac ccttcggaag
      541 atgcgctcct gctcaggcgc gatctcgggc cggactgagg cggcgggccg gccgcggcac
      601 gcggggtcgc tggtggaagt gtcggtgttt tcagggatgt gtgcagcaaa tcggtgcgtg
      661 gcaactggac tttatcttta gcgtgtgggc gagtcatgga catcccgccc aggaggagtg
      721 tatgagccgg agcttgaaca aggtgacgct gatcggaaac ctcggcaacg atcccgaggt
      781 gcgctcgacc accgggggga accgcgtggc caccttctcc ctcgccacca gccggtcgtg
      841 gaacgacgcg agcggggcga agcaggagaa gacggagtgg caccgctgcg tggtgtggaa
      901 cacgaagagc tcgcagctcg ccgacatcgt cgagaagtac gtgaagaagg gcgacaagct
      961 ctacgtggaa gggcgcatcg agtaccgcca gtggcaggac aaggagaacc agacccgcta
     1021 ctccaccgag atcaacgtgc gcgagctgat catgctcggc ggcggatcgg gcggcggcgg
     1081 tcgcgctgcc ggcggcgact tcgatgccga ggccaatggc gcgcgcgcgc gctcggcggc
     1141 gccggccaag gcgaaatcgg gtgcgggcgg ggaggatttc gaggactttc ccggcgcgct
     1201 ggcggatgag gacgacgacc tgccgttctg accgcgcagg cgaccggcgt gcagcagggc
     1261 ggcgggcctc tccgaggttc gccgcccgtt ccacgtttcc ccctcgcgca ccgcgatggc
     1321 gcccggctcc ccgccgcggt gcggggcgac gggggcggct cgtcgcgaag tccgctggag
     1381 acccccggta tccccccggg aggtcagtcg tcctacggac aaggcccgcc accaccggtg
     1441 gggcctccgt cctttcccat gcgcctctcc gaggcgcagc agccctcgag cgcgtgtgaa
     1501 gattccccgt ctcggctggt cgctcagcgc cgccgctctc ctcacggtcg gttccgctgc
     1561 cgtcgcgcgc gcgcaggacg tgcgcgccga ttcggcgacg cacaccgtga agcgcggcga
     1621 caccctgtgg gacctcgcgc aaacctatct cggcgatccc tacctgtggc ccgagatcta
     1681 ccggctgaac accgaccaga tcgaggatcc gcactggatc taccccggcg agattctccg
     1741 cctcccggga cgcgccgagg cggcggcgat cgccgcggcc gcggacacga gcctcgtcgg
     1801 ccgcccgccg gtggaggagc cggaacagcc gcgtcgcgtc gccggcccca ccatcttcgc
     1861 gccgcgcgcc ctcccgcgtc cgcagcgtga cgtcgagagc gcggtgccgc cggcgcgggt
     1921 gccgatgggc gacgtgctgc gcgcccccta cttcgacgac gacaacggcc cggggggagc
     1981 ggggcgggtg ctcatcgggt tcgacatccc ggggatccag aagccgaacg ccacgacgaa
     2041 cttccagctc tacgaccggg tgctgatgac gccccccgcc ggcagcgtcg ccgccgagcg
     2101 cgagcggttc gtcgcgtacg tgacgggcga gtacgtggag aacgtgggca cggtcgtcat
     2161 cccgaccgcg atcctgcagg tcgtgcgtcc cccgcgcgag ggcgacgccg ccgtggtcga
     2221 ggtggtgcag ctctacaacc agctcaactc cgaccagcgc gtcatcccgc tcgacacggc
     2281 gggcgccggc gcgttccagg tgccggagcc ggtgccggcg cgcctggccc agacggccaa
     2341 ggtgcggtac atccaccgcg acaagaccgt cctgccgtcg ctgaactact acgtgctgtt
     2401 cgacctctcg gccagggacg gcgtccggat cggcgacgag atccagatct tccgcccgcg
     2461 caccgaggtg aagagcgaca tcgggccggc gatgccggag attgccatcg ccaccgggca
     2521 ggtggtgcgc gtcaccccgt tcggcgccac ggcgcgcatc acggcccagg agcagccggc
     2581 gatccgtgtg ggcg
//
LOCUS       DASSYW010000554         3351 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_203077, whole genome shotgun sequence.
ACCESSION   DASSYW010000554 DASSYW010000000
VERSION     DASSYW010000554.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3351)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3351)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3351
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_203077"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1229)
                     /locus_tag="VFN38_08830"
     CDS             complement(<1..1229)
                     /locus_tag="VFN38_08830"
                     /inference="COORDINATES: protein motif:HMM:NF015155.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MMPL family transporter"
                     /protein_id="HET9011906.1"
                     /translation="MVLTGGESPERPRPGAFARMVVRRRGRVALAWALAALLLLPFAA
                     GVERVLDVSARIDGSESAAVQRALAERFASPFARYAVLVASGLPSPDGEAGRRALARV
                     AAGVSATPGVTRVFSWLDARDTLFTPRGGGTYLLAGLAEEGGSADALVPGLRATARAL
                     EDSLRAEYPGVALRWTGEAALNFDLRRTSAAQAQRAELRALPLTLALLVVAFGTLAAA
                     VLPLGAGLLAIGVSLGAAALAARHLQLSILLQNVVSMLGLGLGVDYALLTVSRFREAL
                     AAGLDAEQAAAEAADRAGHTVAVSGAAVAVGFAALLTVPLNELRSVAVGGLLVTLASV
                     LVATTLLPGVLAWLGPRVDAGRLARRHRAASTPAAAWYGWASWVARHPLLVLALFGTP
                     VALLAWQARRLGTELPRG"
     gene            complement(1220..2218)
                     /locus_tag="VFN38_08835"
     CDS             complement(1220..2218)
                     /locus_tag="VFN38_08835"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HET9011907.1"
                     /translation="MKPTSGLRYQLDVFGGLRKRNTLYSRQRDMAAAPFPRLIQLQTI
                     NACNAACAMCPYPVFKDVFPRGRMDDALFDRVTDEIARHPEVKVFIPMLQNEPFLDRR
                     IFEKVKRFKATTGGRVRVELVTNGAFLTEENVAKIADSGLDVVDVSLDALSREVYGRV
                     RVGLDYDRVLAGVERLLAAKLPATSVFMRLVKVRDNVHEVRAFARAWRRRGVPVFMYT
                     ANNRAGAVAGFDETQRIPDAEIPLRSRVGRRLVRAWMGHCPIPFSSAYILHDGSMILC
                     AHDWGRRELLGNVRDASIAEIWNGERMREIRALVSERRYAEVPACAGCSLWKDGWF"
     gene            complement(2215..>3351)
                     /locus_tag="VFN38_08840"
     CDS             complement(2215..>3351)
                     /locus_tag="VFN38_08840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011908.1"
                     /translation="RGSGRTASIRVRRAGAGDNEALVALALACPMEGDVGLCVSRAPD
                     FFALNRLEGEAWEVACAEERETGAVVGCAAVAERRVWLHGAPAGVVYAYDLKVHPAHR
                     GGPAADALSRWVRDECERRGGPDVPVFLTILAGNASMERRTTGRVVGVPRFARFATVR
                     SHSITLLGRRRLREERTGLRIARARPADVEEMAALWETVARDRQLAPVLDAERLAAFA
                     ASAPGLGLESYRVARRRDGRIAGFAAFWDQSSFKQLRVTRYSPRLAAVRLAFNTLAPL
                     VRSAPLPPAGGALRHATAFNVCAPAGEPAVLRALVRDAHDDLRAEGYSLLTVGLDLRD
                     PLAAALDGLFAQPTDVHAYACSATGDYAGPALDARVLHHEIALV"
BASE COUNT          473 a         1257 c         1273 g          348 t
ORIGIN      
        1 ccgcgcggca gctcggtgcc gagccggcgc gcctgccagg cgaggagcgc gaccggcgtg
       61 ccgaagaggg cgaggacgag cagcggatgg cgcgccaccc acgatgccca gccgtaccac
      121 gcggcggccg gcgtggacgc ggcgcggtga cgccgcgcga gccgccccgc gtccacccgt
      181 ggacccagcc aggcgaggac gcccggcagg agcgtggtcg cgacgaggac gctcgccagc
      241 gtcacgagca gcccgccgac ggccaccgaa cgcagctcgt tcagcggcac ggtgagcagc
      301 gccgcgaacc ccaccgccac cgcggccccc gacacggcta ccgtatgccc cgcccggtcg
      361 gcggcttcgg cggccgcctg ctcggcgtcg agccccgccg ccagcgcctc gcggaagcgg
      421 ctcaccgtga gcagcgcgta gtccacgccg aggccgagcc cgagcatcga gaccacgttc
      481 tggaggagga tcgagagctg caggtgccgc gcggcgagcg ccgccgcgcc gagcgacacg
      541 ccgatcgcca gcaggccggc gcccagcggc agcaccgccg cggccagcgt cccgaaggcg
      601 acgacgagaa gggcgagagt gagcgggagg gcgcgcagct cggcgcgctg cgcctgggcc
      661 gcgctcgtcc ggcggagatc gaagttgagc gcggcttccc ccgtccagcg cagcgcgacg
      721 ccgggatact cggcgcgcag cgagtcctcg agcgcgcgcg cggtggcccg gagcccgggt
      781 acgagggcgt cggcggagcc gccctcctcg gcgagaccgg cgagcaggta ggtgccgccg
      841 ccgcgcggcg tgaagagcgt gtcgcgcgcg tcgagccagg agaatacgcg cgtcacgccc
      901 ggcgtcgccg acacgccggc ggccacccgc gcgagcgccc gccgtcccgc ctcgccgtcg
      961 ggcgacggca ggccgctcgc gaccagcacg gcgtagcgcg cgaacgggga cgcgaagcgc
     1021 tcggcgagcg cgcgctgcac cgccgccgac tcgctgccgt cgatccgcgc cgagacgtcg
     1081 agcacgcgct cgacgccggc cgcgaacggg agcagaagca gggcggcgag cgcccaggcc
     1141 agcgcgacgc gtccccggcg ccgcaccacc atgcgcgcga acgccccggg gcgcgggcgt
     1201 tccggcgact cgccgccggt cagaaccatc cgtccttcca gagcgagcag ccggcgcagg
     1261 cgggaacctc cgcgtagcgg cgctcgctga ccagggcgcg gatctcgcgc atgcgctcgc
     1321 cgttccagat ctcggcgatc gacgcgtcgc ggacgttgcc gagcagctcg cggcggcccc
     1381 agtcgtgggc gcagaggatc atcgagccgt cgtggaggat gtaggccgac gagaagggga
     1441 tcgggcagtg ccccatccag gcgcgcacga gccggcggcc gacgcgcgag cggaggggga
     1501 tctcggcgtc ggggatgcgc tgcgtctcgt cgaagccggc gacggcgccg gcgcggttgt
     1561 tcgccgtgta catgaagacc ggcacgccgc gccgccgcca ggcgcgggcg aaggcgcgca
     1621 cctcgtgcac gttgtcgcgc accttcacga ggcgcatgaa gacgctcgtc gcgggcagct
     1681 tcgccgcgag cagccgctcg acgccggcga ggacgcggtc gtagtcgagc ccgacgcgca
     1741 ccctgccgta gacctcgcgg ctcagcgcgt cgaggctcac gtccaccacg tcgagcccac
     1801 tgtcggcgat cttcgcgacg ttctcctcgg tgaggaaggc gccgttcgtc accagctcga
     1861 cgcggacgcg cccgccggtc gtcgccttga agcgcttcac cttctcgaag atgcgcctgt
     1921 cgaggaaggg ctcgttctgg agcatcggga tgaacacctt cacctccgga tgccgcgcga
     1981 tctcgtcggt cacccggtcg aacagcgcgt cgtccatccg cccccgcggg aagacgtcct
     2041 tgaagacggg gtacggacac atcgcgcagg ccgcgttgca ggcgttgatc gtctgcagct
     2101 ggatgagccg cggaaatggc gccgccgcca tgtcacgctg gcgcgagtac agcgtgttgc
     2161 gcttccgcag cccaccgaag acgtcgagct ggtagcgcag gccggaggtg ggcttcatac
     2221 gagcgcgatc tcgtgatgca gcacccgagc gtccagcgcc ggtcccgcgt agtcgcccgt
     2281 cgccgagcag gcgtaggcgt ggacgtcggt gggctgggcg aacaggccgt cgagcgccgc
     2341 ggcgagcggg tcgcggaggt cgaggcccac cgtgagcagg gagtagccct cggcgcgcag
     2401 gtcgtcgtgc gcgtcgcgca cgagggcgcg cagcaccgcg ggctcgccgg ccggcgcgca
     2461 gacgttgaac gccgtcgcgt ggcgcagcgc accgccggcg gggggaagtg gcgccgagcg
     2521 cacgagtggg gcgagcgtgt tgaaggcgag ccgcacggcg gccagccgcg gcgagtagcg
     2581 cgtcacgcgc aattgcttga acgacgactg gtcccagaac gcggcgaagc cggcgatccg
     2641 gccgtcgcgg cgccgcgcga cgcggtagct ctcgagcccc aggcccggcg ccgacgccgc
     2701 gaacgcggcc agccgttcgg cgtcgagcac cggcgcgagc tggcggtcgc gcgccacggt
     2761 ctcccacagc gccgccatct cctcgacgtc ggccggccgg gcgcgcgcga tgcgcagccc
     2821 cgtgcgctcc tcgcggagcc gccgccggcc gagcagggtg atcgagtgcg agcgcacggt
     2881 ggcgaagcgc gcgaagcgcg gcacccccac cacgcgcccc gtcgtgcgac gctccatcga
     2941 ggcgttgccg gcgaggatcg tcaggaagac ggggacgtcg ggcccgccgc ggcgctcgca
     3001 ctcgtcgcgc acccagcgtg agagcgcgtc ggcggccggc ccgccgcggt gcgcgggatg
     3061 gaccttgagg tcgtacgcgt agacaacgcc ggccggcgcg ccgtgcagcc agacgcgccg
     3121 ctcggcgacc gcggcgcacc ccaccacggc gcccgtctcc cgctcctcgg cgcaggccac
     3181 ctcccacgcc tccccctcga ggcggttgag cgcgaagaag tccggggcgc ggctgacgca
     3241 gagcccgacg tctccctcca tcgggcaggc gagcgcgagg gcgacgagcg cctcgttgtc
     3301 gccggcgccg gcccgacgca cgcggatgga cgccgtccgc ccgctgcccc g
//
LOCUS       DASSYW010000555         3862 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1325436, whole genome shotgun sequence.
ACCESSION   DASSYW010000555 DASSYW010000000
VERSION     DASSYW010000555.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3862)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3862)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3862
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1325436"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2571
                     /locus_tag="VFN38_08845"
     CDS             <1..2571
                     /locus_tag="VFN38_08845"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HET9011909.1"
                     /translation="IRIRGSNSISLSNEPLIILDGVRMDNTPESTAIDVGGQLPSRLN
                     DINSEEIESIEVIKGPAAAALYGTAASNGVIQITTKKGRVGKARWDTFAELGNLHNVD
                     DYPLNLRSYGKNAAGGLVTNCSLFSRTNGRTTACVAIDSTIGNNPIEAAGVYRDGNRR
                     IAGASAAGGADNLTYFVSGEYQKEQNIIQINNQQRANLRTNLRAQLAKNLDAQINIGY
                     VNSDLRRPQNDNNSFGVSAALLGGAADCRAGARGTGGALDHPGLCLSGTDTVSHGYFN
                     RGISPYDFFNIDVRQRVQRLTGGLTSNWTPLSWLAFNGTFGADINHRADTQELQPDVL
                     SVSANSLEGYRGVYRAIINNFTTSLNATATYDWSPSVKLTTSVGSQYVDAGFTRTDAF
                     GAKLLAGTGSLAGTNARFAVGELSQDVRTLGFLGREQIAWRDRAFLTVAARTDKNSAF
                     GANFQRVIYPSVSASWVLNEEPFFPSVGAISSLRVRAAIGSAGQNPGFLAAEQFYTPV
                     TAIVRGVDVPAFTVGGSGNPNLKPEKSTEVEGGFDLGLFGDRVGLEYTHYNKVTKDAL
                     VNVVLAPSLGSGTNRFQNLGQVRNLGDEALLRANVFDGRTVKFDMTVNGSWTSNRLVD
                     LGVDENGVPIPQFTGGFNTPPIFTAGLPLGAYYDRGLSYSDANGDGLIACPQGAGSPG
                     CEYTLADDPTYQGTPFPNVELSFSPALSVGRFVRVTATVDHRGGQKLYNLTGYYRNAV
                     FLNGAQVQTPNASNLAQQAAAYAAANEGVFTGFFEDASFTKLREVAISLTMPQSVAAR
                     LGAGTATLTLAGRNLHTWTKYSGIDPELNAGAQSNFTAADFLTTPQVRYLTARLALSF
                     "
     gene            2600..>3862
                     /locus_tag="VFN38_08850"
     CDS             2600..>3862
                     /locus_tag="VFN38_08850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011910.1"
                     /translation="MRVSRLTTRALLAAALASAAGLAACNQDKLLTVATPDVVLPQDI
                     AGAASLPSAYAAAIADFQVGYAGGYGGGPPALDLNEGIGQMTALLGDEFLNAETFSTR
                     VEVDRRATDDNNQTTLQTFQDLQRSRSTSDLVSSRFRQFLPNDPRGAEVQALSAYILV
                     LMGEAYCNGVPTSVVNADGTFSYGAPQTGVQLFTTALAKFDSAITLATSVGGTTALNL
                     ARIGKGRALIDLNRYAEADAAVAAVPSSFNYSIEHSENTGRQQNAIFSYNYLERRFTV
                     GNQEGGNGLPYVAAADPRVPTFHNTSNGGVGFDGETPLFLTTKFPERQAPTPLAIGAE
                     ARLIQAEAALKAGNLATFLTMLNAARASAPTYTPSGASTEQPLASPAPLTAADIPATP
                     AAREDLLFRERAFTLYLTSHRLGDKRRLI"
BASE COUNT          656 a         1443 c         1219 g          544 t
ORIGIN      
        1 atccgcatcc gcggctccaa ctcgatctcc ctctccaacg agcccctcat catcctcgac
       61 ggcgtgcgga tggacaacac gccggagtcg acggcgatcg acgtcggcgg gcagctcccg
      121 tcgcggctca acgacatcaa ctccgaggag atcgagagca tcgaagtgat caagggcccg
      181 gccgccgcgg cgctgtacgg gaccgccgct tccaatggcg tcatccagat cacgacgaag
      241 aagggacgcg tcggcaaggc gcgctgggat accttcgccg agctcgggaa cctgcacaac
      301 gtcgacgact atccgctcaa cctgcgctcg tacggcaaga acgcggcggg cgggctcgtc
      361 accaactgca gcctgttcag ccgcaccaac ggacgcacga ccgcctgcgt ggcgatcgac
      421 tccacgatcg gcaacaaccc gatcgaggcg gccggtgtgt accgcgacgg caatcgccgc
      481 atcgccgggg cgagtgcggc gggcggtgcc gacaacctca cctacttcgt gtcgggcgag
      541 taccagaagg agcagaacat catccagatc aacaatcagc agcgcgccaa cctgcgcacg
      601 aacctccgcg cgcagctggc caagaacctg gatgcgcaga tcaacatcgg ctacgtgaac
      661 agcgacctgc ggcggcccca gaacgacaac aactcgttcg gggtgtccgc ggcgctgctg
      721 ggcggggcgg ccgactgccg cgccggtgcc cgcggcacgg ggggcgcgct cgaccatccc
      781 ggcctgtgcc tctccgggac cgacacggtg agccacggct acttcaaccg cggcatctcg
      841 ccgtacgatt tcttcaacat cgacgtccgg cagcgcgtcc agcgcctcac cggcggattg
      901 acgagcaact ggaccccgct cagctggctc gccttcaacg gcaccttcgg cgccgacatc
      961 aaccaccgtg ccgataccca ggagctccag ccggacgtgc tctcggtgtc ggccaactcg
     1021 ctggaagggt atcgcggcgt gtaccgcgcg atcatcaaca acttcaccac gagtctcaac
     1081 gccaccgcca cgtacgactg gtcgccgtcg gtgaagctga cgacgagcgt cggatcgcag
     1141 tacgtcgatg ccggcttcac gcgcaccgat gccttcggcg ccaagctgct ggccggcacc
     1201 ggctcgctcg ccggcacgaa cgcccgcttc gcggtcgggg agctcagcca ggacgtgcgc
     1261 acgctcggct tcctcgggcg cgagcagatc gcctggcgcg accgggcatt cctcaccgtt
     1321 gccgcgcgca ccgacaagaa cagcgccttc ggcgcgaact tccagcgcgt gatctatccg
     1381 tcggtcagcg cgtcgtgggt gctcaacgag gagccgttct tccccagcgt gggcgccatc
     1441 tcctcgctgc gcgtgcgggc ggccatcggc tccgccggcc agaatcccgg cttcctcgcc
     1501 gcggagcagt tctacacgcc ggtcacggcg atcgtgcgcg gtgtggacgt gccggcgttc
     1561 accgtgggcg gctcgggcaa ccccaacctc aagccggaga agtccaccga ggtggaagga
     1621 ggcttcgacc tcggcctgtt cggcgatcgc gtgggcctcg agtacacgca ctacaacaag
     1681 gtcacgaagg acgcgctggt gaacgtggtg ctcgcgccgt cgctcggctc cggcaccaac
     1741 cgcttccaga acctcggtca ggtgcgcaac ctcggcgacg aggccctcct gcgcgccaac
     1801 gtgttcgacg ggcggacggt gaagttcgac atgaccgtca acgggtcgtg gacgtccaac
     1861 cggctcgtcg acctgggcgt ggacgagaac ggcgtgccga tcccgcagtt cacgggcggc
     1921 ttcaacacgc cgccgatctt cacggccggc ctgcccctcg gcgcgtacta cgatcgcggg
     1981 ctgtcgtaca gcgacgccaa cggcgacggg ctcatcgcct gtccgcaggg cgccggcagc
     2041 cccggctgcg agtacacgct ggccgacgac ccgacgtacc agggcacgcc cttcccgaac
     2101 gtggagctct cgttctcgcc cgcgctctcg gtgggacgct tcgtgcgcgt gacggccacg
     2161 gtcgatcatc gcggcgggca gaagctgtac aacctcaccg gctattaccg gaacgccgtc
     2221 ttcctcaacg gcgcgcaggt gcagacgccg aacgcctcga acctcgccca gcaggcggcg
     2281 gcgtacgcgg ccgccaacga gggcgtcttc accggcttct tcgaggatgc gtcgttcacc
     2341 aagctccgcg aggtcgccat ctcgctcacc atgccgcagt ccgtcgcggc acggctcggc
     2401 gccggcacgg ccacgctgac cctggccggg cgcaatctcc acacgtggac gaagtacagc
     2461 ggcatcgatc cggagctcaa cgccggcgcg cagtcgaact tcacggcggc cgacttcctg
     2521 accacgccgc aggtccggta cctcacggcg cgactcgcgc tcagcttctg agcggggcca
     2581 ctcacccatg acgaatccaa tgcgcgtctc cagactcacc acccgggccc tcctggccgc
     2641 cgcgctcgcg agcgcggcgg gcctcgcggc ctgcaaccag gacaagctgc tcaccgtggc
     2701 gacgcccgac gtcgtgctgc cccaggacat cgccggggcc gcctcgctgc cgagcgccta
     2761 cgccgccgcc atcgccgact tccaggtggg ctacgccggc ggctacggcg gtggtccccc
     2821 cgcgctcgac ctgaacgagg gcatcgggca gatgaccgcc ctccttggcg acgagttcct
     2881 caacgcggag accttcagca cgcgcgtcga ggtcgatcgt cgcgccaccg acgacaacaa
     2941 ccagaccacc ctgcagacct tccaggacct gcagcgatcg cgctccacgt ccgacctcgt
     3001 ctcgtcacgc ttccggcagt tcctgcccaa cgacccgcgg ggcgcggagg tgcaggcgct
     3061 ctcggcatac atcctcgtgc tgatgggcga ggcgtactgc aacggtgtgc cgacgagcgt
     3121 cgtgaacgcg gacggcacgt tcagctacgg cgcaccgcag accggcgtcc agctgttcac
     3181 cacggcgctc gccaagttcg actcggccat caccctcgcc acctccgtgg gcggcaccac
     3241 cgcgctgaac ctggcgcgga tcggcaaggg acgcgcgctg atcgatctca atcgctacgc
     3301 cgaagccgac gcggcggtcg ccgccgtccc gtcgtcgttc aactacagca tcgagcacag
     3361 cgagaatacg ggtcgccagc agaacgccat cttcagctac aactacctgg agcggcgctt
     3421 cacggtcggc aaccaggagg ggggcaacgg cctgccgtac gtcgccgcgg ccgatccgcg
     3481 cgtgcccacc ttccacaaca ccagcaacgg cggcgtggga ttcgacggcg agacgccgct
     3541 gttcctcacc accaagttcc ccgaacgcca ggccccgacg ccattggcga tcggcgcgga
     3601 ggcgcggctc atccaggcag aagcggccct gaaggcgggc aacctcgcca ccttcctgac
     3661 gatgctgaac gcggcgcgcg cctcggcgcc cacgtacacg ccgtccggcg cgtccaccga
     3721 gcagcccctg gcaagcccgg cgccgctcac ggcggccgac attcccgcca cgccggcggc
     3781 acgggaagac ctgctgttcc gggagcgggc gttcacgctc tacctcacga gccatcggct
     3841 gggcgacaag cggcggctca tc
//
LOCUS       DASSYW010000556         2231 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1441162, whole genome shotgun sequence.
ACCESSION   DASSYW010000556 DASSYW010000000
VERSION     DASSYW010000556.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2231)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2231)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2231
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1441162"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..442)
                     /locus_tag="VFN38_08855"
     CDS             complement(<1..442)
                     /locus_tag="VFN38_08855"
                     /inference="COORDINATES: protein motif:HMM:NF014873.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011911.1"
                     /translation="MATAPFSLTGYQDRLAQIDPAPIVGRVVRTVGLLIESSGPRASV
                     GSICEIAASSGPPLTVEVVGFQDNTLLTVPLGDTSGIRPGDRVVARNDVAAVPVGGAL
                     LGRVVDALGNPLDGATLNLPHRYPLRPAPLNPLMRDPVTKPIGTG"
     gene            complement(442..1116)
                     /locus_tag="VFN38_08860"
     CDS             complement(442..1116)
                     /locus_tag="VFN38_08860"
                     /inference="COORDINATES: protein motif:HMM:NF014196.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FliH/SctL family protein"
                     /protein_id="HET9011912.1"
                     /translation="MSSSAGVAAPVASWLETVADGAVPASGRRAAQRVAPGAATPLPV
                     LAGGAPAPVAVTPAQIEQEIFAKGFAQGQQSAAAAAQQETAALAKKLAATLDDLMRVR
                     NEMIRHTEKQMVQLALAVARRIVHREVSIDPNVLVTMMRVALERVSDSARVTVRLHPA
                     DHQSVAAALAEAGTSDQVTVTADGRLARGACRIESEYGDIDAGVDAQIQEIARALLGE
                     AKRPGT"
     gene            complement(1133..2146)
                     /gene="fliG"
                     /locus_tag="VFN38_08865"
     CDS             complement(1133..2146)
                     /gene="fliG"
                     /locus_tag="VFN38_08865"
                     /inference="COORDINATES: protein motif:HMM:TIGR00207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009433 - bacterial-type flagellum basal
                     body, C ring [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliG"
                     /protein_id="HET9011913.1"
                     /translation="MNIQTTMSGLRKAAIVALMIGEDASASIFKHLSEDEIETLLSEM
                     AALGRISSKMGEQVLEEFHQTAVAAEHVARGDIEFAKRVLVKSFGPDTARRMIDRVMR
                     AFQSNAGFASLERADPQQLSKFILGEHPQTIALILAHLQPANAAQLATLLPEELRVEV
                     LTRMASLEDISPDVVSRISSVIEVRLKALGGPSREQHGGVRAVAELFNRLERTVSTPV
                     LEAIEEARPELAVSIRNLMFVFDDLLHVDDNGMREIIQRADKKGLTVALKGASDEIRQ
                     RFFINMSKRAGEMLREEMEVLGAVRLRDVEKAQQEVVAIARKLEEEGLISTGAAAGEA
                     YVV"
BASE COUNT          309 a          806 c          751 g          365 t
ORIGIN      
        1 cccccgtccc gatcggcttg gtcaccggat cgcgcatcaa cgggttgagc ggtgccggcc
       61 gcaacggata ccggtgcggc agattgagcg tggcgccatc gagcgggttg ccgagcgcgt
      121 ccacgacgcg gccgagcagc gctccgccga cgggtaccgc cgccacgtcg ttgcgcgcga
      181 cgacgcggtc gcccggacgg atgccggacg tgtcgccgag cggcaccgtc agcagcgtgt
      241 tgtcttggaa gccgaccact tcgaccgtga gcggcggacc gctgcttgcc gcgatttcgc
      301 agatcgagcc caccgacgcc cgcggaccgc tggattcgat gagcaggccc actgtgcgca
      361 cgacgcggcc gacgatcggt gcggggtcga tctgggccag ccggtcctgg tagcccgtga
      421 gcgagaaggg ggcagtcgcc attacgtgcc gggcctcttc gcctcgccga gcagcgctcg
      481 cgcgatctcc tgaatctgcg catccacgcc ggcgtcgatg tcgccgtatt ccgattcgat
      541 gcgacaggcg ccgcgcgcca gccggccatc ggcggtcacc gtcacctggt cgctggtgcc
      601 ggcctcggcc agagccgcgg ccacactctg gtggtcggcg ggatggagac gcacggtcac
      661 gcgggcggaa tcgctcaccc gctcgagcgc cacgcgcatc atggtcacga gcacgttggg
      721 gtcgatcgac acctcgcggt gcacgatccg gcgggcgacc gccagagcca gctgcaccat
      781 ctgcttctcg gtgtgccgga tcatctcgtt gcgcacgcgc atcaggtcgt ccagggtggc
      841 cgcaagcttc ttggccaggg cggcggtttc ctgctgcgcc gcggcggccg ccgactgctg
      901 tccctgcgcg aaccctttcg cgaagatttc ctgctcgatc tgcgccggcg tcaccgccac
      961 gggagcgggc gcaccgcccg cgagcacggg caacggggtg gccgcaccgg gcgccacacg
     1021 ctgtgcggcg cggcggcccg acgccggcac ggcgccgtcg gcgacggtct ccagccacga
     1081 cgccacgggc gccgccacgc ccgcactgga agacactgcc aagcggcgcg ccttagacga
     1141 catacgcctc gccggcggcg gcgccagtgg agatcagccc ttcttcttcg agcttccgcg
     1201 cgatggcgac cacttcctgc tgcgccttct cgacgtcgcg caggcgcacg gcgcccagca
     1261 cttccatctc ttcgcgcagc atctcgccgg cgcgcttgga catgttgatg aagaagcgct
     1321 ggcggatttc gtcgctcgcg cccttgagcg cgacggtgag ccccttcttg tcggcgcgct
     1381 ggatgatctc gcgcatgccg ttgtcgtcca cgtgcagcag gtcgtcgaac acgaacatca
     1441 ggttgcggat cgacaccgcc agctccggcc gcgcttcttc gatcgcttcg agcaccggcg
     1501 tgctgaccgt gcgctccagc cggttgaaca gctcggccac cgcccggacg ccgccgtgct
     1561 gctcgcgcga cgggccgccg agcgccttga gacgcacctc gatcacgctc gagatccgcg
     1621 acaccacgtc gggcgagatg tcctccaggc tcgccatccg cgtcagcact tcgacgcgca
     1681 gctcctcggg cagcagtgtg gcgagctgcg ccgcgttggc cggctgcagg tgcgccagga
     1741 tgagcgcaat cgtctgcggg tgttcgccga ggatgaactt ggacagctgc tgcgggtcgg
     1801 cgcgctcgag cgaggcgaag ccggcgttcg actggaacgc ccgcatcacg cggtcgatca
     1861 tgcggcgagc ggtatctggt ccgaagctct tgaccagcac gcgcttggcg aactcgatgt
     1921 cgccgcgggc cacgtgctcg gccgccaccg ccgtctggtg gaactcctcg aggacctgct
     1981 cgcccatctt gctcgagatg cggcccaggg ccgccatctc gctgaggagc gtctcgatct
     2041 cgtcttcgga gaggtgcttg aagatgctgg cggacgcgtc ctcgccgatc atcagggcga
     2101 cgatcgcggc cttgcgcagg cccgacatcg tggtctggat gttcacctca ccgcacctct
     2161 tccttcatcc agctgcgcag caccttggcg acgtgctccg gttccttcat cgcgccgtcc
     2221 gccacgcgct t
//
LOCUS       DASSYW010000557         2266 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1680711, whole genome shotgun sequence.
ACCESSION   DASSYW010000557 DASSYW010000000
VERSION     DASSYW010000557.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2266)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2266)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2266
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1680711"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..244)
                     /locus_tag="VFN38_08870"
     CDS             complement(<1..244)
                     /locus_tag="VFN38_08870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011914.1"
                     /translation="MLVVVGLSIGVRLPTGQPPVERASEEPVSAEELVFLPMPASPTA
                     PAAAPSPATAIETIVRQRALPRAGGAAPGDTSSAALP"
     gene            778..1794
                     /locus_tag="VFN38_08875"
     CDS             778..1794
                     /locus_tag="VFN38_08875"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HET9011915.1"
                     /translation="MTASILPLRSPFPFAPKHPAALHRDGAHGQRAGQSLPPGTRLPG
                     EGTHYQIVRELGRGAAGTVYLARDVALHRTVAIKVLAAEHGCIESCERFRREARMAAQ
                     LAHPNIVPLFSFGESGGAMYIVMQYVSGGSLAERLRHESRLPAAEVRRILTDLGHALD
                     HAHRRGVVHRDVKPENVLLDAESGRAMLVDFGVATRPWWEVPHSELRRAFGTPAFMSP
                     EQALGDPSVDGRSDVYAVGVLGYAMLAGTLPFAGRDPMAVAARRLGGSARPLAELAPE
                     APAWLVATIERCMEPEAERRWPSALALLEALSDERSPRTTSRRATAAWLARTTASLRR
                     LLSR"
     gene            complement(1697..>2266)
                     /locus_tag="VFN38_08880"
     CDS             complement(1697..>2266)
                     /locus_tag="VFN38_08880"
                     /inference="COORDINATES: protein motif:HMM:NF012503.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016830 - carbon-carbon lyase activity
                     [Evidence IEA];
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-dependent decarboxylase"
                     /protein_id="HET9011916.1"
                     /translation="YLFHGDDSEERIWDQGIRSFQCSRRADVVKLWVALQRYGAAGIG
                     ALHDHLCDTARALHEEIAARADFEALHAPQSNILCFRYVGAGSRRARARLDDEALDAI
                     NRELRERYNRSGAGWITATNLAGRRVLRVTVMNPRTTRHHLRALLDGLAAEGSALVSA
                     RGAAAATPSSAPATPPSPDGSSSAGSARR"
BASE COUNT          274 a          850 c          858 g          284 t
ORIGIN      
        1 cggggagtgc ggcggacgac gtgtcgcccg gcgccgcgcc gcccgcgcgc ggcagggcgc
       61 gctgccgcac gatcgtctcg atcgccgtcg ccggcgacgg cgccgcggcc ggcgcggtgg
      121 gcgacgccgg catcggcagg aagacgagtt cctcggcgga cacgggctcc tcgctcgccc
      181 gctcgacggg cggctggccc gtcggcaggc gcacgccgat cgagaggccg acgacgacca
      241 gcatcagcag cgtcagcgca gaagcgagcg cccggacgcg ccacgaggtc gggggcgcgg
      301 cgagtgcggc cggcccgcgg atcgccgcgc gccgctcccg ccgcccgccc tccggcgcgg
      361 aaggcggcgc gggagagggg gagcggctct cgatcgtggg cagggtcgga cggctgatga
      421 cggcgtctcc gccggccgga gcggccggat ggtcgtggcg ttaggcgcgg ggatgcccgc
      481 ccgggaagtt cccccgggcc cgtgcgacga ggtccgcccc cgctggtacc cggcagcggg
      541 gcgtgtggat cgggcgccca cccgatgggg cggcaacgcc cgtaccgcgt cgccggaagc
      601 gcccgcactg tccgattccg ggacggagaa tgccggaatc ggacgcgccg ccgccgggcc
      661 gaaaatacaa cggcaaacct ttcaacgcgt tacggcatct cacgaatggt atcactctcg
      721 cctcgagtgg cccgtttccc cgcgcttcga cgcgccgcat ctctcgccgt tccgccgatg
      781 accgcctcca tcctcccgct acgctccccc ttccccttcg cgccgaagca tccggccgcg
      841 ctgcaccgcg acggtgcgca cggccagcgt gctgggcagt ccctgccgcc gggcacgcgg
      901 ctgcccgggg agggcacgca ctatcagatc gtgcgcgagc tcgggcgggg cgccgccggc
      961 accgtctacc tggcgagaga cgtcgcgctc caccgcacgg tggcgatcaa ggtgctggcc
     1021 gccgagcatg gctgcatcga gtcgtgcgag cgcttccgcc gcgaggcgcg gatggccgcc
     1081 cagctcgcgc acccgaacat cgtccccctc ttctccttcg gcgagagcgg cggcgcgatg
     1141 tacatcgtca tgcagtacgt gagcggcggc tcgctcgccg agcggctgcg tcacgagtcc
     1201 cgcctcccgg ccgccgaggt gcgccgcatc ctcaccgacc tcgggcacgc cctcgaccac
     1261 gcgcaccggc gcggcgtcgt ccaccgcgac gtgaagccgg agaacgtgct gctcgacgcc
     1321 gagagcggac gcgcgatgct ggtggacttc ggcgtcgcga cgcgtccctg gtgggaggtg
     1381 ccgcactccg agctgcgccg cgccttcggc accccggcct tcatgtcccc cgagcaggcg
     1441 ctcggcgatc cgagcgtgga cggacggagc gacgtctacg cggtcggcgt gctcggctac
     1501 gcgatgctcg ccggcacgct cccgttcgcc ggccgcgatc cgatggcggt cgcggcgcgg
     1561 cggctcggcg ggtcggcccg cccgctcgcg gagctggcgc cggaggcccc ggcctggctc
     1621 gtggcgacga tcgagcgctg catggagccg gaggccgagc ggcgctggcc gagcgccctc
     1681 gccctcctcg aggcgctcag cgacgagcgc tccccgcgga cgacgagccg tcgggcgacg
     1741 gcggcgtggc tggcgcggac gacggcgtcg ctgcggcggc tcctctcgcg ctgaccagcg
     1801 cgctcccctc ggcggccagc ccgtcgagca gggcgcgcag gtggtggcgc gtcgtgcgcg
     1861 ggttcatgac cgtcacgcgc agcacgcggc ggccggcgag attcgtcgcc gtgatccagc
     1921 cggcgccgga gcggttgtag cgctcgcgca gctcgcggtt gatcgcgtcg agcgcctcgt
     1981 cgtcgagccg ggcgcgagcg cgcctcgagc cggcgcccac gtagcggaag cagaggatgt
     2041 tcgactgcgg cgcgtggagc gcctcgaagt cggcgcgggc cgcgatctcc tcgtggaggg
     2101 cgcgcgccgt gtcgcagagg tggtcgtgga gcgcgccgat ccccgccgcg ccgtagcgct
     2161 gcagggcgac ccagagcttg acgacgtcgg cgcggcgcga gcactggaag ctgcggatcc
     2221 cctgatccca gatccgctcc tcgctgtcgt cgccgtgaaa gaggta
//
LOCUS       DASSYW010000558         2185 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_935344, whole genome shotgun sequence.
ACCESSION   DASSYW010000558 DASSYW010000000
VERSION     DASSYW010000558.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2185)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2185)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2185
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_935344"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            57..545
                     /locus_tag="VFN38_08885"
     CDS             57..545
                     /locus_tag="VFN38_08885"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HET9011917.1"
                     /translation="MAAAIAEAGDETKREIQNLRALIAELRPAALDELGLGPAIETLA
                     ERSAAGAGVEVSTRVSLGGGPTRLAPDTENAVYRVVQEALTNVVKHACASHVRVQVAR
                     ANGSVSVLVEDDGQGFDPAECSDGLGLVGMRERVELTGGQLEISSRPGEPTRVSARLP
                     VG"
     gene            complement(616..>2185)
                     /locus_tag="VFN38_08890"
     CDS             complement(616..>2185)
                     /locus_tag="VFN38_08890"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HET9011918.1"
                     /translation="LIRPLLSRVSTAYDEAGRVPGGWVALIFAGILLSAFATEEIGIA
                     VIFGAFIMGAIMPRHAGLTEDVTHRVEDFVVTLLLPLFFAYTGLRTDIGLLDRPILWG
                     ITLLLIAVAIFGKFFGAMIAARVTGWSWRGSAVIGTLMNTRGLTELIVLNLALEKGVI
                     SQALFAMLVIMALVTTFMAGPLLAFLDPKNDYGAPVEEELEEARRVSSFEAPDLVVPE
                     KSILIAPQTDSELEHLRALAEPLADSEPPRELIVARLVRPPRRASATGGLQTENKLLK
                     DATDEVTFARLDLMDKGIAARAVAFTSVDPGKDLVRLANTEEVDLLLMDGRRPLLGDG
                     VPRGDVGTVLREAECDVAVLVASENQGVLPTEEHGVLVPFGGAEHDWAALELGAWIAA
                     RTGVPLRMLGAASEGDDPTRVTRLLGDASLLVQQYAGISAEPVVAEGGREGVIAAARE
                     AGLLVIGLSERWRQEGLGATRSDIAKSAPAPTIFVRRGLRPGALAPRGDVTRFTWSSP
                     GAGSGDIRPGEPIA"
BASE COUNT          326 a          778 c          793 g          288 t
ORIGIN      
        1 tcgtcggatt gcggatgctg ctgtcctcgg cgcgccggtc cggatccgcg gaggagatgg
       61 ccgccgcgat cgccgaggcc ggggatgaga ccaagcgcga gatccagaac ctccgcgcgc
      121 tgatcgcgga gttgcgcccc gcggcgctcg acgagctggg actgggcccg gcgatcgaga
      181 ctctggccga gcgcagcgcc gcgggtgccg gggttgaggt gtccacccgc gtgtcgctcg
      241 gcggcggacc cacccggctc gcgccggaca cggagaacgc cgtctaccgc gtggttcagg
      301 aggcgctcac caacgtggtc aagcacgcgt gcgcatctca cgtgcgcgtg caggtggcgc
      361 gcgcaaacgg gtcggtcagc gtgctggtgg aggacgatgg ccagggcttc gatccggccg
      421 agtgctccga tggactgggc ctcgtgggca tgcgcgagcg tgtggagctg accggtgggc
      481 agctcgagat cagctcgcgg cccggcgagc cgacgcgggt gagcgcgcgc ctgccggttg
      541 ggtgaaatga agccggcggc gtctcgaccc tgagccccgc gctctgggcc gagcgccgcc
      601 ggcggtaagc gccgcttacg cgatcggctc cccgggcctg atgtcgcccg agcccgcacc
      661 tggtgacgac caggtgaagc gcgtcacgtc gccgcgcggc gccagcgccc cgggccgcag
      721 gccgcgtcgc acgaatatcg tcggtgccgg agcgctcttg gcgatgtccg accgcgtcgc
      781 gccgaggccc tcctggcgcc agcgctcgga gagcccgatc accagcagcc cggcctcacg
      841 ggccgcagcg atgacgccct cgcgaccacc ctcggccacg acgggctccg ccgagatgcc
      901 cgcgtactgc tggacgagca gcgaggcgtc tccgagcagc cgggtcacgc gggtggggtc
      961 gtcgccctcc gaggccgcgc ccagcatgcg caggggcacg ccggtgcggg cggcgatcca
     1021 ggcgccgagc tccagcgcgg cccagtcgtg ctccgcgcca ccgaacggaa cgagcacccc
     1081 gtgctcctcc gtcgggagca cgccctggtt ctcgctggcc acgagcacgg ccacgtcgca
     1141 ttccgcctcg cgcaacactg tgccgacatc gccgcgcggc acgccgtcgc cgagcagcgg
     1201 ccggcggccg tccatcaaga ggaggtccac ctcctcggtg ttcgccaagc ggaccaggtc
     1261 cttgccgggg tcgaccgacg tgaaggccac cgcgcgcgcc gcgatgccct tgtccatcag
     1321 atcgagccgc gcgaacgtga cctcgtcggt cgcgtccttg agcagcttgt tctcggtctg
     1381 gaggccgccg gtggcgctcg cgcgcctcgg cgggcgcacc agccgggcca cgatcagctc
     1441 gcgtggcggc tcggagtcgg caagcggctc cgcgagcgcc cgcaggtgct cgagctccga
     1501 gtcggtctgg ggagcgatga ggatcgactt ctccggcacc accaggtcgg gcgcctcgaa
     1561 gctcgacacc cgccgggctt cctccagctc ctcctcaacg ggcgctccgt agtcgttctt
     1621 cgggtcaagg aacgcgagca gcgggcccgc catgaaggtc gtgacgagcg ccatgatcac
     1681 gagcatcgcg aacagtgcct gggagatgac gcccttctcg agcgccaggt tgagcacgat
     1741 cagctcggtg aggccgcgtg tgttcatcag cgtgccgatg acggccgacc cgcgccagct
     1801 ccagccggtc acgcgcgcgg cgatcatcgc gccgaagaac ttgccgaaga tcgcgacggc
     1861 gatcagcagc agcgtgatgc cccagaggat cggccggtcg agcaggccga tgtcggtacg
     1921 caggccggtg taggcgaaga acagcggcag cagcagcgtg acgacgaagt cctcgacgcg
     1981 gtgggtgacg tcctcggtca gccccgcgtg gcgcggcatg atcgcgccca tgatgaacgc
     2041 gccgaagatg acggcgatgc cgatctcctc ggtggcgaac gccgacagca ggatgcccgc
     2101 gaagatcaac gcgacccagc cgcccggcac gcggccggcc tcgtcgtacg cagtcgacac
     2161 gcgcgagagc agcgggcgaa tcagc
//
LOCUS       DASSYW010000559         5530 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1235600, whole genome shotgun sequence.
ACCESSION   DASSYW010000559 DASSYW010000000
VERSION     DASSYW010000559.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 5530)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5530)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5530
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1235600"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            127..606
                     /locus_tag="VFN38_08895"
     CDS             127..606
                     /locus_tag="VFN38_08895"
                     /inference="COORDINATES: protein motif:HMM:NF015506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0031992 - energy transducer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HET9011919.1"
                     /translation="MPPVLSRRIRVLLLLLAGGISPACAENETTQKVAQAFQAGASGP
                     DEVPRMLNTELPFRYPAALYAQKVQGNVTLRLRIDRDGQVSADSTRIEESSGYAALDS
                     AAVKGSQELHFIPAKLRGEPMPVTILFPVYFRHPDAHALPGDTILKRDAVPPAGSGQ"
     gene            603..2024
                     /locus_tag="VFN38_08900"
     CDS             603..2024
                     /locus_tag="VFN38_08900"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HET9011920.1"
                     /translation="MSAPASPAAGVMRNTRPYDNVLDTIGWTPLIRLNRVTRGVRTPV
                     YGKAEFFNPGGSVKDRIGLPIIERAERDGSLKPGGTIVEGTSGNTGVGLAIAAALKGY
                     KCIFTMPDKMSQEKVRLLKAFGAEVIVTPTAVAPDHPDNYVMMAKRIAEETPNAILAN
                     QFYNQANPEAHYATTGPELWEQTEGRITHFVAAAGTGGTITGVGRYLKERNPKIQIVA
                     GDPHGSILAELWRSKGKHKIEGAPYKVEGIGQDKLPGTLDLAVVDDFRTVSDRDAFAM
                     ARRLTREEGLFVGGSAGLITHLALQVAREIDDPDALIVTFLCDTGERYLSKLFNDEWM
                     RENQLLEPDRVTLGDLLAHKGDGAPETLVSAVPGQLVRQALGLMRLHDVSQLPVLEGG
                     ECVGSVTEYALTQRGLESSRFLDAVVGEVMDEAFPVVDAAQHVESVQKLLSKATPAVL
                     VRQAGTIGGIVTRSDMLAYLMAR"
     gene            2120..3163
                     /locus_tag="VFN38_08905"
     CDS             2120..3163
                     /locus_tag="VFN38_08905"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008716 - D-alanine-D-alanine ligase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HET9011921.1"
                     /translation="MRITVLMGGTSSERDVSLASGLRIAEALRSRGHAVKTVDTAKGP
                     VTEDEERRLLAGGVVKTAPPTPEELARMKAESLTETTARLPKRGDCDVAFLALHGGSG
                     EDGTIQALLDLAGVPYTGSGHLASALAMDKDLSKHLLRAHGVRTADWLMAMDPGAPPS
                     TGDVERALGWPVIVKPSKQGSTVGLSIVKQPQELHAAITEAFKHDDEVMIERFIAGRE
                     LSAPVIGGEALPVGEIIPKHEIYDYECKYTPGMAEEIFPAPLSAAETTEVQTQARRAF
                     AALKLSGCARIDFRMTASGEFYCLEANTLPGMTATSLVPQGAAAAGISFPDLCERIAQ
                     LAVNPPRPGSAGR"
     gene            3160..3825
                     /locus_tag="VFN38_08910"
     CDS             3160..3825
                     /locus_tag="VFN38_08910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011922.1"
                     /translation="MNASRTKLPSQTAALAGIPAGIQAAGPWSGRRQLFVRFASEAET
                     ATIYTSEALKSELKRLAARSRYHSIVVAGRDPLAEVEYLAAAFRDGAPLPVMLDHDGQ
                     RPEALETLLRALALVQVCLSGTESDPAIERACASLALAADKGVNHALVIVPALETSDA
                     LLLRVVERAGGASGETAIIVHPTLESVSDPDRRWILWLERASQLHGDVRVLPRVPAPT
                     GMQ"
     gene            4010..4942
                     /locus_tag="VFN38_08915"
     CDS             4010..4942
                     /locus_tag="VFN38_08915"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF013827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HET9011923.1"
                     /translation="MANPTHYLEHDTPRLTRAVQVLVALNVAILFLQWTVVNDADLFA
                     TLGFRDTSLSRTLWSAVSYSFAHYGFWHLAVNMFALLTFGPRLESVMGTRAFTLYYLW
                     CGVGGAVAHLLFLRTGILVGATAAVLGVMYGYAQHWPDDQLALFGVVPVRAWTMIVVL
                     SVAGLTIGMTGAADLGSDRTLYLAHLGGLAFGWLYLRTPPAASIERLRQRISPAPDYQ
                     DEAPPRPIPRTLPRQRTQRDEVDEIVAQSKAIAAQQQPAARALVVPARTSGEMRVAEL
                     DRVLDKISARGLESLTLEERAVLDAMARRLRGEG"
     gene            5092..5490
                     /gene="queF"
                     /locus_tag="VFN38_08920"
     CDS             5092..5490
                     /gene="queF"
                     /locus_tag="VFN38_08920"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033739 - preQ1 synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preQ(1) synthase"
                     /protein_id="HET9011924.1"
                     /translation="MPRPDLLETFANPYPGRDYLIAMECPEFTSLCPLGGIEADAADL
                     KQLEGGAPDFATMHINYVPGELCVELKSLKLYLWSFRNDGIFYERAVNRILDDLADAV
                     KPRWMEVVGDFNIRGGIKSVITAHVGRRTG"
BASE COUNT          845 a         1866 c         2050 g          769 t
ORIGIN      
        1 cacgctcacg ccgctcgccg cgctgcagct ggtggccgag ctcgccgagc gcgcccgcac
       61 atgatccccc gccgcggccc gagggtgcgg atgcgcggac tccgcggcac gggctacatt
      121 ggtcgcatgc cgcccgttct ctcccgccgg atccgtgtgc tcctgctgct gctcgccggc
      181 ggcatctccc cggcctgcgc cgagaacgag acgacgcaga aggtggccca ggcgttccag
      241 gccggggcgt cggggcccga cgaggtgccg cggatgctca acaccgagct gccgttccgc
      301 tatccggctg cgctctacgc gcagaaggtg cagggcaacg tgacgctccg gctgcggatc
      361 gaccgcgacg gccaggtgag cgccgattcg acgcggatcg aggagtcgag cggatacgcc
      421 gctctcgact ccgcggccgt gaagggctcg caggagctcc acttcattcc cgccaagctg
      481 cgtggtgagc cgatgccggt gacgatcctc tttcccgtgt acttccgtca ccccgacgcg
      541 cacgcgctgc cgggcgacac gatcctgaag cgcgacgccg tgcccccggc cgggagcggc
      601 cagtgagcgc gcccgcgtcg cccgccgccg gcgtcatgcg caacacgcgc ccgtacgaca
      661 acgtcctcga cacgatcggg tggaccccgc tcatccggtt gaaccgggtc acccgggggg
      721 tgcggacgcc ggtgtacggg aaggcggagt tcttcaaccc gggcgggtcg gtgaaggacc
      781 ggatcgggct gccgatcatc gagcgcgccg agcgggacgg gtcgctcaag cccggcggga
      841 cgatcgtgga gggcacgagc ggcaacaccg gcgtggggct cgccatcgcc gccgcgctga
      901 agggctacaa gtgcatcttc acgatgccgg acaagatgtc gcaggagaag gtgcggctgc
      961 tgaaggcgtt cggagcggaa gtcatcgtca cgcccaccgc ggtggccccc gaccatccgg
     1021 acaactacgt gatgatggcg aagcggatcg ccgaggagac gcccaacgcg atcctcgcga
     1081 accagttcta caaccaggcg aaccccgagg cgcactacgc gacgaccggc cccgagctgt
     1141 gggagcagac ggaggggcgc atcacgcact tcgtcgccgc cgcgggcact ggggggacga
     1201 tcaccggcgt cggtcgctac ctgaaggagc ggaacccgaa gatccagatc gtcgccggcg
     1261 acccgcacgg gtcgatcctc gcggagctgt ggcgcagcaa ggggaagcac aagatcgagg
     1321 gcgcgccgta caaggtggag gggatcggcc aggacaagct gccgggcacg ctcgacctcg
     1381 cggtggtgga cgacttccgc acggtgagcg accgcgatgc cttcgccatg gcgcgccggc
     1441 tcacgcgcga ggaggggctg ttcgtgggcg ggtcggcggg gctgatcacg cacctcgcgc
     1501 tccaggtggc gcgcgagatc gacgatccgg acgcgctcat cgtgaccttc ctctgcgaca
     1561 cgggcgagcg ctacctctcg aagctgttca acgacgagtg gatgcgcgag aaccagctgc
     1621 tcgagccgga ccgcgtgacc ctcggcgacc tgctcgccca caagggtgac ggcgcgccgg
     1681 agacgctggt gagcgccgtg ccgggccagc tggtgcggca ggccctcggg ctgatgcggc
     1741 tgcacgacgt ctcgcagctc ccggtgctcg agggtggcga gtgcgtgggc agcgtgacgg
     1801 aatacgcgct cacccagcgc ggcctggaga gctcgcgctt cctggacgcg gtggtgggcg
     1861 aggtgatgga cgaggccttc ccggtggtgg acgcggccca gcacgtggaa tcggtccaga
     1921 agctgctgtc gaaggcgacg ccggcggtgc tggtgcgcca ggcgggtacg atcgggggca
     1981 tcgtgacgcg gagcgacatg ctggcgtacc tgatggcgcg ctgacgcgcg ccgtgaatgg
     2041 tgagcggtaa acggtaaacg gtcgcaccgg attcgcagtc accgatcccg gctccccgtt
     2101 cacgttcttt caaggaccaa tgcgcatcac tgttctcatg ggcgggacct cctccgagcg
     2161 cgacgtctcc ctggcttcgg ggctgcgcat cgccgaggcg ctgcgctcgc gcggccacgc
     2221 ggtgaagacc gtggacaccg cgaagggtcc cgtcaccgag gacgaggagc gccggctgct
     2281 cgccgggggg gtggtgaaga cggcgccccc cacgcccgag gagctggcgc gcatgaaggc
     2341 ggagtcgctc accgagacga cggcgcggct gccgaagcgc ggcgactgcg acgtcgcctt
     2401 cctggcgctg cacggcggca gtggcgagga cgggacgatc caggcgctgc tcgacctcgc
     2461 cggcgtgccg tacacgggca gcggccatct ggcgagcgcc ctcgcgatgg acaaggatct
     2521 ctccaagcac ctgctgcgcg cgcacggggt ccgcaccgcc gactggctca tggcgatgga
     2581 tccgggcgcg ccgccgagca cgggcgacgt ggagcgcgcg ctggggtggc cggtgatcgt
     2641 gaagccgtcc aagcagggat ccaccgtggg gctctcgatc gtgaagcagc cgcaggagct
     2701 gcacgccgcg atcaccgagg cgttcaagca cgacgacgag gtgatgatcg agcggttcat
     2761 cgccggccgc gagctgagcg ccccggtgat cgggggcgag gcgctgccgg tgggggagat
     2821 catcccgaag cacgagatct acgactacga gtgcaagtac acccccggga tggccgagga
     2881 gatctttccc gcccccctgt cggcggcgga gacgacggag gtgcagacgc aggcgcggcg
     2941 cgcgttcgcc gcgctcaagc tgagcgggtg cgcgcgcatc gacttccgga tgaccgcctc
     3001 gggggagttc tactgcctgg aggcgaacac gctgcccgga atgacggcga ccagcctcgt
     3061 accccagggg gcggcggcgg cgggcatcag cttccccgac ctctgcgagc gcatcgcgca
     3121 gctcgccgtg aaccctcccc gaccgggtag cgccggacga tgaacgcatc gcgcacgaag
     3181 ctgccgagcc agacggcggc gctcgcgggg atcccggccg gaatccaggc ggccggaccg
     3241 tggagcgggc gccggcagct gttcgtgcgc ttcgcgagcg aggcggaaac cgcgacgatc
     3301 tacacgtccg aggccctcaa gagcgagctg aaacggctcg ccgcgcggtc gcgctatcac
     3361 tcgatcgtcg tcgccgggcg cgatccgctg gcggaggtgg agtatctcgc cgcggcgttc
     3421 cgcgatggcg cgccgctccc cgtgatgctc gaccacgacg gccagcgtcc cgaggcgctg
     3481 gagaccctgc tgcgcgcgct ggcgctcgtc caggtgtgcc tgagcgggac cgagagcgat
     3541 ccggcgatcg agcgggcatg cgcgtcgctc gcgctggccg cggacaaggg ggtgaaccac
     3601 gccctcgtga tcgtaccggc cctggagacg agtgacgcgc tacttctgcg ggtcgtcgaa
     3661 cgagcggggg gcgcgagcgg ggagacggcg atcatcgtgc atcccacgct ggagagcgtc
     3721 agcgacccgg atcgccggtg gatcctctgg ctcgagcgcg cgtcgcagct ccacggcgac
     3781 gtccgcgtgc tgccacgggt gcccgcgccg acggggatgc agtaggggcc ggcacccggg
     3841 gcgcgcggcg gaggtgacgc gcgcccgcgc gcgggggtgg tggtggagtc gcaggagcgg
     3901 aactcgcaac gcgcgcgatg gttagtacgt tcaggtgatg gcggcttcgc caggcgcctc
     3961 catatcgtac agcagcagcg gcatcagtgg tgcacagcag cccggtccca tggcgaatcc
     4021 gacgcactac ctcgagcacg acacgccacg cctgacgcgg gcggtgcagg tgctggtcgc
     4081 gctcaacgtg gcgatcctgt tcctgcagtg gacggtcgtg aacgatgccg acctgttcgc
     4141 gacgctgggc ttccgggaca cgagcctgtc gcgcacgctg tggagcgccg tgtcgtacag
     4201 cttcgcgcac tacggcttct ggcatctggc cgtgaacatg ttcgcgctgc tcaccttcgg
     4261 gccgcggctc gagtcggtga tgggcacgcg cgccttcacg ctgtactacc tgtggtgcgg
     4321 ggtgggtggc gcggtggcgc acctgctgtt cttgcgcacg ggaatcctcg tgggggcgac
     4381 ggcggcggtg ctcggcgtca tgtacggcta tgcgcagcac tggcccgacg accagctcgc
     4441 gctgttcggc gtggtgccgg tgcgggcgtg gacgatgatc gtcgtgctct ccgtcgccgg
     4501 cctgacgatc ggcatgaccg gcgcggccga tctcggaagc gaccgcacgc tgtacctggc
     4561 gcacctgggc gggctggcgt tcggctggct gtatctgcgc acgccgccgg cggcgagcat
     4621 cgagcggctg cggcagcgga tctcgcccgc gcccgactac caggacgagg ccccgccgcg
     4681 ccccattccc cgcaccctcc cccgccagcg cacgcagcgc gacgaggtgg acgagatcgt
     4741 cgcgcagagc aaggcgatcg cggcgcagca gcagcccgcg gcgcgcgcgc tcgtggtgcc
     4801 ggcccggacg tcgggcgaga tgcgggtggc cgagctggac cgcgtgctgg acaagatctc
     4861 cgcgcgcggg ctggagagcc tgacgctcga ggagcgggcg gtgctcgacg cgatggccag
     4921 gcgcctgcgc ggcgaggggt agtaaagaaa gagccccccg gacttgccgg ggggcagtac
     4981 cgccaggccg ttctcccggc ggcatcggcc ggcccagagg ggaccggcac ttttccaaca
     5041 tacggagcat tccccgtgcc gcgctagggc acggcggtct acatttccgg catgccacgt
     5101 cccgacctgc tggagacctt cgccaacccc tatcccggac gcgattacct gatcgcgatg
     5161 gaatgtccgg agttcacctc gctctgcccg ctgggcggga tcgaggccga cgcggctgac
     5221 ctgaagcagc tcgagggggg ggcccccgac ttcgccacca tgcacatcaa ctacgtgccg
     5281 ggcgagctct gcgtcgagct gaagagcctc aagctctatc tctggagctt ccgcaacgac
     5341 ggcatcttct acgagcgggc ggtgaaccgg atcctcgacg acctcgccga cgcggtgaag
     5401 ccgaggtgga tggaggtggt gggggacttc aacatccgcg gcgggatcaa gagcgtgatc
     5461 acggcgcacg tcggccgccg gacggggtga cggccggcag gggagggtag tcccttcctc
     5521 gcaggccgcc
//
LOCUS       DASSYW010000560         2846 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1770394, whole genome shotgun sequence.
ACCESSION   DASSYW010000560 DASSYW010000000
VERSION     DASSYW010000560.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2846)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2846)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2846
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1770394"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..547
                     /locus_tag="VFN38_08925"
     CDS             <1..547
                     /locus_tag="VFN38_08925"
                     /inference="COORDINATES: protein motif:HMM:NF012402.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011925.1"
                     /translation="RVSLTVERLEDGEVSSYLVDELRDGDLLELRGPIGGWFTWSGSD
                     GGPLLLVAGGSGLAPLMAMIRHRAAAGSDAATRLLVSARGAGDLLFARELEELAAADP
                     ALDVSITLTRSPPAGWTGYARRVDLEMLRQVAFDPAERPRTFVCGPTAFVEQVAELLV
                     ALGHDPAGVKTERFGPSGGTA"
     gene            544..816
                     /locus_tag="VFN38_08930"
     CDS             544..816
                     /locus_tag="VFN38_08930"
                     /inference="COORDINATES: protein motif:HMM:NF040451.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6510 family protein"
                     /protein_id="HET9011926.1"
                     /translation="MSEDGIRLDGNAAAGPLSEAFAAEMTTAIGTCAGCGARAALGTT
                     HVYTGGPGTVLRCSSCESVLIRFARIRGTLNVEMRGVRRVELHPPQ"
     gene            902..2716
                     /locus_tag="VFN38_08935"
     CDS             902..2716
                     /locus_tag="VFN38_08935"
                     /inference="COORDINATES: protein motif:HMM:NF013739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HET9011927.1"
                     /translation="MGEGISRRRLLQDGAAVAAAATLGGALSAESAAARRKPRVPRSK
                     RGKRVAVLGGGMAGLAAAHELVERGFIVDVYERKALGGKARSIPVAHTASGGRKRLPG
                     EHGFRFFPGFYHHVPDTMRRIPFGNNAHGVWDNLVDATETKSPRTGGHADGTVFGVAP
                     DPNEARTPDGMRRILMDGLSGHGVPPNELAFFVERLMVFLTSSDERRYGQWEHVSWWD
                     FIQAEGKSEEYKKVIARGMTRAVVAAKERKASTRTIGNMGEAFVYCIMGRGNDGSADR
                     VLNAPTNEAWVDPWVALLRKRGVRFHVGHAVEALDVRRGRIDAARARDRHGRRRWIDA
                     DWFVSAMPAERARKLWSPKVLAIDPHLKAMDELFVDWMNGIQFYLRKPLNIVRGHMTF
                     MDAPWAVTALTQGQFWANRKFTRDYGDGSVVDCLSVDVSDWDTPGILYGKPAKRCTKQ
                     QVAKEVFAQIKEHLNDNGQDVLTDDMVHSWHLDPAIAWSKSRRRNSNDEPLLVNTVGT
                     WEKRPQARTKVPNLFLAGDYVQTDVDLATMEGANESGRAAVNALLDTAGSKADRVKMY
                     KLYDPPEFEAAKRADAELYRQGRPNALDQPLPTSLPSL"
BASE COUNT          417 a          981 c         1095 g          353 t
ORIGIN      
        1 gcgcgtatcg ctcaccgtcg agcggctcga ggacggcgag gtgtcgtcgt acctcgtgga
       61 cgagctgcgc gacggcgacc tgctcgagct ccgcgggccg atcggcggct ggttcacctg
      121 gagtggctcc gacggcggcc cattgctgct cgtcgcggga ggctcggggc tcgcgccgct
      181 gatggcgatg atccgccacc gcgccgcggc cggcagcgac gccgccacgc ggctgctcgt
      241 ctccgcgcgc ggcgccggcg acctgctgtt cgcgcgcgag ctcgaggagc tcgccgcggc
      301 cgaccccgcg ctcgacgtct cgatcacgct cacgcgcagc ccgccggcgg ggtggaccgg
      361 ctacgcgcgg cgcgtggacc tcgagatgct gcggcaggtg gcgttcgacc cggccgagcg
      421 cccgcgcacg ttcgtgtgcg ggcccaccgc gttcgtcgag caggtggcgg agctgctcgt
      481 cgcgctcggc cacgaccccg cgggcgtgaa gaccgagcgc ttcggaccga gtggagggac
      541 ggcatgagcg aggacggcat ccgcctcgac ggcaacgccg cggccgggcc gctgagcgag
      601 gcgttcgcgg cggagatgac cacggcgatc ggcacctgcg cggggtgcgg cgcgcgcgcc
      661 gcgctcggca cgacgcacgt ctacacggga gggccgggca cggtgctgcg ctgctcctcg
      721 tgcgagtcgg tgctgatccg cttcgcgcgc atccgcggca ccctcaacgt ggagatgcgc
      781 ggcgtgcgcc gcgtcgagct gcacccgccg cagtagccgg gcgcggcccg cccgatgttt
      841 gccgggcgcg ccaggaaggg aaactcgagg caggggacgc gggggctacc ggaggaggcg
      901 catgggcgag gggatctcga ggcggcggct gctgcaggac ggcgcggccg tggcggcggc
      961 tgcgacgctg ggcggcgcat tgtcggccga atccgcggcg gcgcggcgca agccgcgagt
     1021 gccgcgctcg aagcgcggca agcgggtggc ggtgctcggc ggcggcatgg cggggctggc
     1081 cgcggcgcac gagctcgtgg agcgagggtt catcgtggac gtgtacgagc gcaaggcgct
     1141 cggcggcaag gcccgcagca tcccggtggc ccacaccgcg agcggcggcc ggaagcggct
     1201 gccgggcgag cacgggttcc gcttcttccc cggcttctac caccacgtgc ccgacacgat
     1261 gcggcgcatc ccgttcggaa acaacgccca cggcgtgtgg gacaacctcg tggacgccac
     1321 cgagacgaag tcgccgcgca ccggcggcca cgccgacggc acggtgttcg gcgtcgcgcc
     1381 cgacccgaac gaggcgcgca cgcccgacgg catgcgccgg atcctgatgg acggcctcag
     1441 cggccacggc gtgccgccca acgagctggc cttcttcgtc gagcgcctga tggtgttcct
     1501 cacgagctcc gacgagcgcc gctacggcca gtgggagcac gtgagctggt gggacttcat
     1561 ccaggccgag ggcaagtcgg aggagtacaa gaaggtgatc gcgcgcggga tgacgcgtgc
     1621 cgttgtggcc gccaaggaac gaaaggcgag cacgcgcacc atcggcaaca tgggcgaggc
     1681 gttcgtgtac tgcatcatgg gccgcggcaa cgacgggtcg gccgaccgcg tgctcaacgc
     1741 gcccaccaac gaggcctggg tggacccgtg ggtggcgctc ctgcgaaagc gcggtgtgcg
     1801 cttccacgtg ggccacgcgg tggaggcgct cgacgtgcgc cgcggaagga tcgacgccgc
     1861 gcgtgcgcgc gaccgccacg gacgccggcg ctggatcgac gcggactggt tcgtgtccgc
     1921 catgccggcc gagcgcgcgc gcaagctgtg gtcgcccaag gtgctcgcga tcgacccgca
     1981 cctgaaagcg atggacgagc tgttcgtgga ctggatgaac gggatccagt tctacctgcg
     2041 caagccgctg aacatcgtgc gcggccacat gacgttcatg gacgcgccgt gggcggtcac
     2101 cgcgctcacc cagggccagt tctgggcgaa ccggaagttc acgcgcgact acggcgacgg
     2161 cagcgtggtg gactgcctgt cggtggacgt gtccgactgg gacacgccgg ggatcctcta
     2221 cggcaagccc gcgaagcgct gcaccaagca gcaggtggcg aaggaggtgt tcgcccagat
     2281 caaggagcac ctgaacgaca acggccagga cgtgctcacc gacgacatgg tccactcgtg
     2341 gcacctcgac ccggccatcg cgtggtcgaa gtcgcgccgg cgcaactcga acgacgagcc
     2401 gctgctcgtg aacacggtcg gcacatggga gaagcggccg caggcgcgca ccaaggtgcc
     2461 gaacctgttc ctcgccggcg actacgtgca gaccgacgtg gacctcgcga cgatggaggg
     2521 cgccaacgag tcgggccgcg ccgccgtgaa cgcgctgctc gacacggccg gctcgaaggc
     2581 ggaccgcgtg aagatgtaca agctctacga cccgcccgag ttcgaggccg cgaagcgcgc
     2641 ggacgccgag ctttaccggc agggccggcc gaacgcgctg gaccagccgc tgccgacgag
     2701 cctgccctcg ctgtgaccgc ggccacagcc gagcgtgcgg acgccgtggt ggtgggcgcg
     2761 cggccggcgg gcacggcggt ggcggccacg ctcgcccgtg ccgggcggag ggtggtggcg
     2821 ctcgaccgcg cgcgcttccc gtcgga
//
LOCUS       DASSYW010000561         3425 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_343640, whole genome shotgun sequence.
ACCESSION   DASSYW010000561 DASSYW010000000
VERSION     DASSYW010000561.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3425)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3425)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3425
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_343640"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..835)
                     /locus_tag="VFN38_08940"
     CDS             complement(<1..835)
                     /locus_tag="VFN38_08940"
                     /inference="COORDINATES: protein motif:HMM:NF024931.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium chelatase domain-containing protein"
                     /protein_id="HET9011928.1"
                     /translation="MLAAIRSAAVLGIDAYDVTVEVDVAPGLPQWIIVGLPASAVKES
                     RERVGAALVNAGFTVPPRRVTVNLAPADVKKEGTAFDLPIALGLLVGTGVLDPVRVES
                     CVIVGELGLDGSVRPVRGALSIARRVAASDDRAPRTLVLPEANVAEAALVHGLRLSAP
                     ATLAQVADWLRRGVLPAPTRRPAVAGAEDTLDIADVAGQEGAKRALTIAAAGAHGILL
                     IGPPGAGKTMLARRLPTILPALTNAEALEVTAVHSVAGMLDATTGVVSHRPFRAPHHS
                     IS"
     gene            1145..1534
                     /locus_tag="VFN38_08945"
     CDS             1145..1534
                     /locus_tag="VFN38_08945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HET9011929.1"
                     /translation="MPRPRKGFTLIELLVVIVIIGVLATIAIPKFTNTKAKAYPAAMK
                     SDLRNLAAAEEAFFADSLYYIAYGDTTKLRFVPSADVSTPSIIVGQGSWSATVTHSQM
                     LNYSCGIGVNTTNTIVPTAGDGEPACK"
     gene            complement(1566..>3425)
                     /locus_tag="VFN38_08950"
     CDS             complement(1566..>3425)
                     /locus_tag="VFN38_08950"
                     /inference="COORDINATES: protein motif:HMM:NF039587.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5916 domain-containing protein"
                     /protein_id="HET9011930.1"
                     /translation="TLDATVNPDFGQVEVDPAVVNLSDFETTFQEKRPFFVANSSAFS
                     FGGMNCFFCSNVSSLNVFYSRRIGRAPQLGSLARSQAKFTDVPDASTILGAAKITGRT
                     KRGLEVAMLEALTNKATARYVTAPGDPVLEREVEPMTNYFVGRVRQDFRKGDTRIGMI
                     TTLTNRFMSDSAERSRLRANAQLVGADVRHFWSKRTYSFWGQVAVTNVAGDTAAIRRT
                     QLASAHYFQRPDRKATSDGLFNVAYDPTRTSLQGYGFYARLAKESGDWLWETAQNWRS
                     PGFEVNDIAALGRTDYKWMQASVLRQWTRPTSWYRNAAAIVGGQQQFSYDGDRTDQQE
                     QIFGQITFPNYISASGFFINHPPTYDALRTRGGVVVKNSGYNYFSGSLNGDSRNRISW
                     DAGASHGRDITDDGWVGDGYATLIIKPRENVRVSVGPSYSRQVEPAQFVTNIDDPTNA
                     AFGGLRNVFAELDQHSFSMNTRVNATFSPTLTLELFAQPFLASGHYTNLKEYAAPRTG
                     DVLLYGRDIGTRAEERDSVGKLLRYRIDPDEAGAAAEFTVDNPDFNIRSLRGTAVVRW
                     EYRPGSTLFFVWTQERSGFDAFGDFDFRRDRSALFRDRPVNVFQVKASYWLGL"
BASE COUNT          538 a         1154 c         1196 g          537 t
ORIGIN      
        1 tggagatgga atggtggggg gcacgaaagg gacggtggct caccaccccg gtggtcgcgt
       61 cgagcatgcc ggccaccgaa tgcaccgcgg tgacctcgag cgcctcggcg ttcgtgagtg
      121 cggggaggat ggtgggcagg cggcgggcga gcatggtctt ccccgccccc ggcggcccga
      181 tgagcaggat gccgtgcgcg cccgccgccg cgatggtgag cgcgcgcttg gcgccctcct
      241 ggccggcgac gtcggcgatg tcgagcgtgt cctccgcgcc ggcgacggca gggcgccgcg
      301 tcggcgcggg gagcacgccc cgccggagcc agtcggccac ctgcgcgagg gtggccggcg
      361 ccgacagccg cagcccgtgc acgagcgccg cctcggcgac gttggcctcc ggcagcacca
      421 gggtgcgcgg cgcgcggtcg tccgaggcgg ctacacgccg ggcgatggac agcgcaccgc
      481 gaaccggacg caccgatcca tccagcccca gctcgcccac gatgacgcac gactccaccc
      541 gcaccgggtc gagcactccc gtgccgacca ggaggccgag ggcgatcggc aggtcgaacg
      601 ccgtgccctc cttcttcacg tcggccggcg cgaggttcac cgtgacgcgg cgcggcggta
      661 cggtgaagcc ggcgttgacg agcgccgcgc cgacgcgctc gcggctctcc ttcaccgcgc
      721 tcgccggcaa tcccacgatg atccactgcg gcaggccggg ggcaacgtcg acttccacgg
      781 tgacgtcgta ggcgtcgatc cccagcacgg cggcggaacg aatggcggcg agcacacgcc
      841 aagctgcacg gaggggagga gcgacgccgc gccgatccct tgcgcccgca tccattcgga
      901 tgccaattgc ggcgcacgtg gctgtcgcat tttcggcggt gttcgtgcag gacgcggcgg
      961 gacgatcgct gcacgagcga atcgagcgcc cgccgatcat catgcaagtg cttgtattac
     1021 aacagcttac ggcgacgcca ctcgccggcg gccacgtggc atcggcactg ctttagtatg
     1081 cccggaacga gcagcacctc gtcgcgacgg cgcgacgggg cacctacaag accggatcct
     1141 ttccatgcct cgtccgcgga agggcttcac cttgatcgag cttctcgtgg tgatcgtgat
     1201 catcggcgtg ctcgcgacga tcgcgatccc gaagttcacg aacacgaagg ccaaggcgta
     1261 tccggcggcg atgaagtccg acctccgcaa tctggcggcg gccgaggagg cgttcttcgc
     1321 cgactcgctc tactacatcg cgtacggcga cacgacgaag ctgcgcttcg taccgtcggc
     1381 cgacgtgagc acgccctcca tcatcgtggg ccagggatcc tggtcggcca cggtgacgca
     1441 ctcgcagatg ctgaactaca gctgcggcat cggcgtgaac acgaccaata ccatcgtccc
     1501 gacggcgggc gacggggagc ccgcctgcaa gtaggcgcgg gctcccggac caccgaccgg
     1561 accggtcaga ggcccagcca gtagctggcc ttcacctgga acacgttgac cgggcggtcg
     1621 cggaacagcg cggagcggtc gcgccggaag tcgaaatcgc caaaggcgtc gaagccggaa
     1681 cgctcctggg tccagacgaa gaacagggtg gagcccggtc ggtactccca gcgcacgacg
     1741 gccgtgccgc gcagggagcg aatgttgaag tccgggttgt ccacggtgaa ctcggcggcc
     1801 gccccggctt cgtcgggatc gatgcgatag cgcaggagct tcccgacgct gtcgcgttcc
     1861 tccgcccgcg tgccgatgtc gcgaccgtac agcagcacgt cgccggtgcg gggcgcggcg
     1921 tactccttca ggttcgtgta gtgcccgctc gcgaggaacg gctgggcgaa cagctcgagg
     1981 gtcagcgtcg gggagaaggt cgcgttgacc cgggtgttca tcgaaaagct gtgctggtcc
     2041 agctccgcga acacgttacg caggccgccg aaggcggcgt tggtggggtc gtcgatgttc
     2101 gtgacgaact gcgcgggctc cacctggcgc gaatacgagg gcccgacgct cacccggacg
     2161 ttctcgcgcg gcttgatgat gagcgtcgcg tatccgtcgc ccacccagcc gtcgtcggtg
     2221 atgtccctcc cgtgacttgc ccccgcatcc cagctgatcc gattgcgcga atcgccgttc
     2281 agcgagccgg agaagtagtt gtagcccgag ttcttcacca ccacgccgcc gcgagtgcgc
     2341 agcgcatcgt aggtgggagg gtggttgatg aagaatccgc tcgccgagat gtagttcggg
     2401 aaggtgatct ggccgaagat ctgttcctgc tggtcggtgc ggtcgccgtc gtagctgaac
     2461 tgctgctgtc cgccgacgat cgctgccgcg ttgcggtacc agctcgtggg cctcgtccac
     2521 tgccgcagca cgctggcctg catccacttg tagtcggtgc gccccagcgc ggcgatgtcg
     2581 ttcacctcga accccggact gcgccagttc tgcgccgtct cccagagcca gtcgccgctc
     2641 tccttggcca gccgggcgta gaagccgtag ccctgcagcg acgtgcgggt cgggtcgtag
     2701 gccacattga agaggccatc gctcgtggcc ttgcggtctg gacgctggaa gtagtgcgcg
     2761 ctggcgagct gggtccgccg gatcgccgcc gtatcccccg ccacgttcgt cacggcaacc
     2821 tggccccaga acgaatacgt gcgcttcgac cagaagtggc ggacgtcggc gcccacgagc
     2881 tgcgcgttgg cgcgcaggcg gctccgctcg gccgaatcgc tcatgaaccg gttcgtcagc
     2941 gtggtgatca tcccgatgcg ggtgtcaccc ttgcggaagt cctggcgcac ccggccgacg
     3001 aagtagttcg tcatcggctc cacctcgcgc tccaggacgg gatcgccggg cgccgtcacg
     3061 tagcgcgccg tcgccttgtt ggtgagcgcc tcgagcatgg cgacctcgag cccgcgcttc
     3121 gtgcggccgg tgatcttcgc cgcgccgagg atggtggagg cgtccgggac gtcggtgaac
     3181 ttcgcctgcg accgtgcgag gctgccgagc tgcggcgcgc ggccgatgcg ccgcgagtag
     3241 aagacgttga ggctcgagac gttgctgcag aagaagcagt tcatcccccc gaacgagaag
     3301 gccgaggagt tggcgacgaa gaaggggcgc ttctcctgga aggtcgtttc gaagtcggac
     3361 aggttcacga ccgctgggtc cacctccacc tggccgaaat ccgggttcac cgtcgcatcc
     3421 agggt
//
LOCUS       DASSYW010000562         2193 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_442440, whole genome shotgun sequence.
ACCESSION   DASSYW010000562 DASSYW010000000
VERSION     DASSYW010000562.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2193)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2193)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2193
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_442440"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..488)
                     /locus_tag="VFN38_08955"
     CDS             complement(<1..488)
                     /locus_tag="VFN38_08955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylhomocysteinase"
                     /protein_id="HET9011931.1"
                     /translation="MSTATSEQHAYDLAKAAGRVPYKVADLNLAEFGRKELRLAEGEM
                     PGLMAIRKRYEGKKPLAGARIMGSLHMTIQTAVLIETLTELGADVRWVSCNIFSTQDH
                     AAAAVVVGRPETGGTVANPRGIPVFAWKGETLDEYWWCTKEALMWPDGSGPTLIVDDG
                     GDA"
     gene            complement(506..1420)
                     /locus_tag="VFN38_08960"
     CDS             complement(506..1420)
                     /locus_tag="VFN38_08960"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HET9011932.1"
                     /translation="MSALSDQTRCRMLLLLERHELTVSELCAVLQMPQSSVSRHLKTL
                     ADDDWVASRRDGTSRFYSMPADDLDSGAKRLWPLIREQVVATSAAGQDDRRLKGVLTR
                     RRAKSQEFFASAAAGWDRLRQDLYGDGFYVSAVLGLIDPNLLVGDLGCGTGQLTETLA
                     PYVKQVVAVDASMDMLDAARARLDGATTNVDFRKGELESLPLKDGELDVAVLSLVLHY
                     SPAPAKTLAEAARVIRKGGRVLVVDMLPHEHEEYQQQMGHVWLGFSDKQMTRFLASAG
                     FADVRVRNLPADPDAGGPALFSAVAVKA"
     gene            1562..>2193
                     /locus_tag="VFN38_08965"
     CDS             1562..>2193
                     /locus_tag="VFN38_08965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011933.1"
                     /translation="MTRHLACSIAALLALASTESNARTAPPLASPNVEILVNGVPQTR
                     YAHEGRWYVEALKGREYAIRLRNPYPVRVAVALSVDGLNTIDARETSAKGARKWVLGP
                     YETVTISGWQTSASHARAFEFTTEERSYGQALGNTANLGIISAAFLRERTPVYSLNRD
                     RQERKAEAAPAAPPAAAERSQNKADADEYAATGMGRSRDHAVQQVWLDLE"
BASE COUNT          362 a          782 c          705 g          344 t
ORIGIN      
        1 gcgtctccgc cgtcgtcgac aatgagcgtg gggccggacc cgtcgggcca catcagggct
       61 tccttcgtgc accaccagta ctcgtcgagc gtctcgccct tccacgcgaa caccgggatg
      121 ccgcgcgggt tggccaccgt gccgcccgtc tccggacggc cgacgacgac cgccgccgcg
      181 gcgtgatcct gggtcgagaa gatgttgcac gagacccatc gcacgtcggc gccgagctcg
      241 gtcaacgttt cgatgagcac ggcagtctgg atggtcatgt gcaggctgcc catgatgcgg
      301 gcgcccgcga gcggcttctt gccctcgtag cgcttgcgga tcgccatgag gccgggcatt
      361 tcgccctcgg ccagccgcag ttccttccgg ccgaactccg ccagattcag gtccgccacc
      421 ttgtagggaa cgcgacccgc cgccttggcg aggtcgtatg cgtgctgttc gctcgttgct
      481 gtcgacattg cctgcttctc ctgtgttagg ccttcactgc cactgctgaa aagagcgccg
      541 ggccgcccgc gtcagggtcg gccggcaggt tccgcacgcg cacgtcggcg aagccggcgc
      601 tcgcgaggaa ccgcgtcatc tgcttgtccg aaaacccgag ccacacgtgg cccatctgct
      661 gctgatactc ctcgtgctcg tgcggcagca tgtcgaccac gagcacccgg ccgcccttcc
      721 gaatcacgcg agcggcctcc gccaacgtct tggccggcgc cggcgaatag tgcagcacca
      781 gcgacagcac cgcgacgtcg agctcgccgt ccttgagcgg caacgactcg agctccccct
      841 tgcggaaatc cacgttcgtg gtggcgccgt cgagacgcgc gcgcgccgcg tcgagcatgt
      901 ccatcgacgc gtccaccgcc acgacctgct tgacgtaggg cgccagcgtc tccgtgagct
      961 gcccggtgcc gcatccgaga tccccgacga ggagattcgg gtcgatcaac cccaggaccg
     1021 ccgacacgta gaacccgtcg ccgtagagat cctgccgaag cctatcccac cccgccgccg
     1081 cgctggcgaa gaactcctgc gacttcgccc gccgacgggt cagcacaccc ttgagccgcc
     1141 gatcgtcctg cccagcggcc gaggtagcaa ccacctgctc gcggatgagc ggccacagcc
     1201 gcttggcgcc cgaatcgagg tcgtcggccg gcatgctgta gaaccggctc gtcccgtcgc
     1261 gccgcgacgc cacccagtcg tcgtcggcca gcgtcttcag gtgccggctg acgctcgact
     1321 gcggcatctg cagaaccgcg cagagctcgg aaacggtgag ctcgtgccgc tccagcagca
     1381 gcagcatgcg gcaccgtgtc tggtcagaca gggccgacat gtggtcgagg atcggggcat
     1441 tcatgggcgt tttgggatgt atccgtaaat ccggatggaa tgataccaag ccgggctggt
     1501 tgcgtcaacc ccatccccgc aagaaccggc aacggcctcg ttctgagccc aggaggatgt
     1561 gatgacacga cacctggcct gctccatcgc cgcgctcctg gcgctggcgt ctaccgaatc
     1621 caacgctcga accgcgccgc cgctcgcctc tcccaacgtc gagattctgg tgaacggcgt
     1681 gccgcagaca cgctacgccc acgaggggcg ctggtatgtg gaagcgctga agggtcgcga
     1741 gtacgcgatt cgcctgcgca atccctaccc ggtgcgcgtc gccgtcgcgc tctcggtgga
     1801 cggcctcaac acgatcgacg cgcgcgagac cagcgcgaag ggcgcgcgca agtgggtcct
     1861 cggaccctat gaaacggtga ccatctccgg ctggcagacg agcgcgtcgc atgcgcgcgc
     1921 cttcgagttc accaccgagg agcgctcgta cggccaggcg ctcggcaata ccgccaatct
     1981 cggcatcatc tcggcggcgt tcttacgcga gcggacgccg gtgtattcgc tgaaccggga
     2041 ccggcaggaa cgcaaggccg aagcagcgcc ggcggcaccg cccgcggcgg cggagcgcag
     2101 ccagaacaag gcggacgccg acgagtacgc cgctaccggg atgggacgaa gccgcgatca
     2161 tgccgtccag caggtgtggc tcgatctcga gga
//
LOCUS       DASSYW010000563         2649 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_542285, whole genome shotgun sequence.
ACCESSION   DASSYW010000563 DASSYW010000000
VERSION     DASSYW010000563.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2649)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2649)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2649
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_542285"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            18..2003
                     /locus_tag="VFN38_08970"
     CDS             18..2003
                     /locus_tag="VFN38_08970"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HET9011934.1"
                     /translation="MRGAEPVAVISYGLWQDLGGDSAIIGKRFSIDGAQRTVVGVMPR
                     GFWFPSPAIRIWTARALDPEGRNGSYTFIGRTAPGADVASLAPHIARLTQVIGERFTY
                     AERADKTKDAWVKPLREELVGSMRPALFATLMAMVLILLIACVNVTALMLGQVEGRST
                     ELIVRSALGATRSRITQQLVVEALLIGLLAAAAGGGLASVAFPVLARSLPIGAWKEAA
                     TFDWTLFAVALVLAMLAVLLVVLVATMSLWRGDLRGGLSSSRTGGIEGRGGRLERGLV
                     VAEVALAMLIASGGALLVRSVTNLYAINPGVETNGVAVIDVLSDASLEPRRRIQKIDE
                     MIAALSELPGARSVAAALKIPLRGGGDSFGIGVEGEGDGERTFTYFRMVSPLYFETMG
                     IRLLEGRTFDVSDLAPPADSTVREIPVVINAALAATYFPGQNPIGRRLVGGLAVPQRI
                     IGIVADVAEANLTDGPEPTRYYMHAQAWFGKGGVLVIRTDRPEDAATLLPEARKTVER
                     VAPEFAVQGTTTMSRVFDAAVGPARQVMSLLSLLSGLALVLGAVGIYGVIAHFAARRK
                     RDWAIRVALGLPGSRVVTHVVRQGAVLAGVGIGLGALGAALLTRLLTSFLYGVSGVDP
                     IAFAAAGAALLLIGLVAAFIPARRAGTVDPAIVLREQ"
     gene            2000..2335
                     /locus_tag="VFN38_08975"
     CDS             2000..2335
                     /locus_tag="VFN38_08975"
                     /inference="COORDINATES: protein motif:HMM:NF015513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HET9011935.1"
                     /translation="MSAADFVPLGVLEEHILIAVFRTGDEAYGMQVRREIEQVTGRDL
                     AIGAVYSTLDRLEEKGLLSSRRALDGGPSRRRFSLSPAGARALAATRAMRDRLWEGVP
                     LQRLLHLAR"
BASE COUNT          361 a          873 c          944 g          471 t
ORIGIN      
        1 tccggaccgg cgatgatgtg cggggcgccg agccggtcgc cgtgatcagc tacggtctct
       61 ggcaggacct ggggggcgat tccgccatca tcggcaagcg cttcagcatc gacggcgccc
      121 agcgcaccgt cgtcggcgtg atgccgcggg gattctggtt cccttcgccc gcgatccgga
      181 tctggaccgc gagggcgctg gaccccgaag ggcgaaacgg gagctacacg ttcatcggcc
      241 gcaccgctcc gggcgctgac gtcgcctcgc tggcgccgca catcgcgcgc cttacccaag
      301 tgatcggcga gcggttcacg tacgccgagc gggcggacaa gaccaaggat gcgtgggtaa
      361 agccgcttcg cgaggagctg gtgggatcga tgcgaccggc gctgttcgcc accctcatgg
      421 cgatggtcct catcctgctc atcgcctgcg tgaatgtgac agcgctcatg ctggggcagg
      481 tcgaggggcg ctcaacggag ttgatcgtgc gatcggcact cggcgcgact cgctcgcgga
      541 tcacccagca gctcgtcgtg gaggcgctcc tcatcgggct gctcgcggcc gcggcgggcg
      601 gcgggctcgc gtcagtggct ttcccggtgc tggcccggtc actgccgatc ggggcgtgga
      661 aggaggccgc caccttcgac tggactctct ttgccgtcgc gctggtgctg gcgatgctcg
      721 cagtcctgct ggtggtgctg gtcgccacga tgtccctctg gcggggtgac ctgcggggcg
      781 ggctcagcag cagcaggacc ggtggcatcg aagggcgtgg cggccggctg gaacggggac
      841 tggtggtcgc ggaggtcgcg ctcgcaatgc tcatcgcctc cggcggggcg ctgctggtgc
      901 ggagtgtcac gaacctctat gcgatcaacc ccggcgtgga gacgaacggc gtggccgtga
      961 tcgacgtgtt gtcggatgcc agcctcgagc cgcgtcgcag aatccagaag atcgatgaga
     1021 tgatcgccgc cttgagcgag cttcccggcg cgcgatcggt cgcggccgcg ctcaagatcc
     1081 cgctgcgcgg tggcggtgac agtttcggca tcggcgtcga aggcgaggga gatggcgagc
     1141 gaaccttcac gtatttccgg atggtctcac cgctctattt cgagaccatg gggatccgcc
     1201 tgctggaagg ccgaaccttt gacgtctccg acctggctcc cccggccgat tcaacggttc
     1261 gtgagattcc cgtcgtgatc aacgcggcgc tcgcggcgac gtatttcccg ggccagaacc
     1321 cgatcggaag gcgactggtc ggcggcctcg cggtccccca acgcatcatt ggcatcgtgg
     1381 ccgacgttgc cgaagccaac ctgaccgatg ggcccgagcc gacgcggtac tacatgcacg
     1441 cacaggcctg gttcggaaag ggcggtgtgc tggtgatccg aaccgaccgt cctgaagatg
     1501 ccgccacgct cctcccggag gctcggaaga ccgtcgagcg cgtggcgccc gagttcgcgg
     1561 tgcagggcac cacgacgatg agccgcgtgt tcgatgccgc ggtgggaccg gcgcgccagg
     1621 tgatgtcgct gctctcgctc ctctcgggcc tggcattggt gctcggggcc gtcggcatct
     1681 acggcgtgat cgcgcacttc gctgcgcgcc gcaagcgtga ctgggcgatt cgcgtggcgc
     1741 tgggcttgcc cggctcgcgg gtcgtcaccc acgtggtgcg acaaggggcg gtcctcgcgg
     1801 gcgtcgggat cggtctcggc gcgctcggcg ccgcgctgct gacacggctc ctcacgtcgt
     1861 tcctgtatgg cgtgagcggc gtcgacccga tcgcgttcgc cgccgcgggc gcggcgctcc
     1921 tgctgatcgg cctcgtcgct gcattcattc cggcccggcg cgccggcacc gtggatcccg
     1981 cgatagtgct tcgcgaacaa tgagcgcggc cgatttcgtt cctctcggcg tgctcgaaga
     2041 gcacatcctc attgcggtgt tccggactgg cgatgaggcg tacggcatgc aggtgcgacg
     2101 cgagatcgaa caggtgacgg ggcgcgatct cgccatcggc gcggtctatt cgacgctcga
     2161 ccggctggag gagaagggat tgctctcttc ccggcgggcg ctcgacggtg gtccgtcgcg
     2221 gcggcggttc tcgctgagtc cggcgggagc ccgggccctc gcggcgacgc gcgcgatgcg
     2281 cgaccgcctc tgggagggcg ttcccctgca gcgcctgctc catcttgccc gatgacggcc
     2341 gctcctccgc gggcggcgta gacgccttgt agtctttcct cctacatcgc gattcgccgg
     2401 aatctcacct ctgtcctacc gaacgaccga tgccccgggt cacccgcgtt tcgtagcctt
     2461 cccctacact ttttccctcg gggagcgaac gatgcgcagc atgacgtggt tggggttggc
     2521 ggtgatggcg gttctggcgg cgtgcggcga tgacaacacg atcgagccgc caccgccgcc
     2581 gccacaggcg acggtgttca cggccaccgg tgacatcgcg gcgaaggtcg aggagtttcg
     2641 cacggccct
//
LOCUS       DASSYW010000564         3592 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_166288, whole genome shotgun sequence.
ACCESSION   DASSYW010000564 DASSYW010000000
VERSION     DASSYW010000564.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3592)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3592)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3592
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_166288"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1348)
                     /locus_tag="VFN38_08980"
     CDS             complement(<1..1348)
                     /locus_tag="VFN38_08980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011936.1"
                     /translation="MAERQKRARRSERVARTGRQGSATVGGGLPAIGLEAEFSTVIDG
                     VPQKPEDVFGSPRAIVRGPLVHRTGRSYHLPTGGALYFDTGVMEIATPMIEIARGCGA
                     RGTRSLWESLAFLRGELDAWEAETGREVRLVGFSAHYNVSFDVPRDEAKHGRSVEQLA
                     YLLTHLLAAPVMLLAANRRSTGVGVRPRGNRIEITADFTPDAALMAATATFIVAVVRE
                     VMTWPSYDLAQLDAREIPVVKSFVPVPHSSRKGWVAKYSCFPANPFTADVDGVRWTTR
                     AGERMSLRGMAGRTTRVFWPAIRALGDPLSLRLIAAVMRGRAPSLLELEDRPLAYDDV
                     GRLCTWNDLFPITLLPRSRYERVLSNAIAGRRVRMGGAWHRPVGMKGWTHVVFRRERD
                     GTRHVRSLDDMLMHLDAWDRSADRRLSDRRRSATGEGELERRRAERREQVADTLERR"
     gene            complement(1409..2044)
                     /locus_tag="VFN38_08985"
     CDS             complement(1409..2044)
                     /locus_tag="VFN38_08985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011937.1"
                     /translation="MATNVASFPLRLVDGRRLERQYRDALLPGGILCDNQGQARQLPR
                     YFYEVTSWEQASDTYLAPHFAVSEFIHTDVREAPPLRVFPRYIPCATALLALALEQFR
                     EAVGSYVYIGANGGYCSPRHARTGGASPHCWGTAANIYRVGDTYLDSHETIAKYAAIV
                     REVLPTAWTRPLGPESWKTDDHLHLDLGYVVSVPREAAGETYNVKLVGDPL"
     gene            complement(2044..2922)
                     /locus_tag="VFN38_08990"
     CDS             complement(2044..2922)
                     /locus_tag="VFN38_08990"
                     /inference="COORDINATES: protein motif:HMM:NF024748.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HET9011938.1"
                     /translation="MSSRAPAKPPVPPLDAPTELHARFAELETKSSARALAIAISDLE
                     SGARFAYHADRWFHAASTIKLAILVGVYGAIHRGDLLPQSRVHVRNRFLSAYDGSPYR
                     VRVDRDANAEVHREIGRTLRVAELAEHMITSSSNLATNLLLDLVGLDVLQQTLDGFGL
                     DGLDLRRGVEDELAFEHGINNRVTANGLVGLLKLIGEERAFSPTLSRQMVDVLHGQHF
                     KSGIPAGLPREARVAHKTGEISTIAHDAGLVYLPDRKPYALAVLTEWEPSTPGRSATI
                     AAASYLAYAALIGDRD"
     gene            3152..3337
                     /locus_tag="VFN38_08995"
     CDS             3152..3337
                     /locus_tag="VFN38_08995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011939.1"
                     /translation="MHEAFDPLTEVRAERFRALVAELMPKIRRVSPTLTDDQLRAAAE
                     LMAEYRLADEELGKNAL"
     gene            3342..>3592
                     /locus_tag="VFN38_09000"
     CDS             3342..>3592
                     /locus_tag="VFN38_09000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011940.1"
                     /translation="MSTPPRASPSVPPRSTSHSLVDTLVRHRDLLLEEWRRALVPADA
                     DSLRRGSAACDPMAHVVDALLADLERDVRDPMIAPESVFA"
BASE COUNT          532 a         1296 c         1225 g          539 t
ORIGIN      
        1 gccgccgctc gagcgtgtcc gccacctgct cccgccgctc ggcgcgacgg cgctcgagct
       61 ctccttcacc cgtggccgag cgccggcggt cggacagacg ccggtccgcg ctgcggtccc
      121 acgcgtcgag gtgcatcagc atgtcgtcga gcgaacggac gtgccgcgtc ccgtcccgct
      181 cgcgacggaa cacgacgtgg gtccatccct tcatgcccac cggccgatgc caggcgccgc
      241 ccatccgcac gcggcggccc gcgatcgcat tgctcagcac gcgttcgtac cgcgacctcg
      301 gcagcagcgt gatcgggaag aggtcgttcc acgtgcacag ccgaccgacg tcgtcatagg
      361 cgagcggacg gtcctcgagc tcgagcagcg acggggcacg cccgcgcatc accgccgcga
      421 tgagccgcag cgacagcgga tcgcccagcg cgcggatcgc cggccagaac acccgcgtcg
      481 tccgccccgc catgccgcgc agcgacatcc gctcgccggc gcgcgtcgtc cagcgcacgc
      541 cgtccacgtc cgccgtgaac ggattggccg ggaagcagct gtacttcgcc acccacccct
      601 ttcgcgagct gtgcggcacc ggcacgaagc tcttcacgac ggggatctcc cgcgcatcga
      661 gctgggcgag gtcgtagctc ggccacgtca tcacctcgcg gaccacggcg acgatgaacg
      721 tcgccgtcgc cgccatgagc gccgcgtcgg gggtgaagtc ggcggtgatc tcgatccggt
      781 ttccgcgtgg acggaccccg acgcccgtgg accgccggtt cgccgccagc agcatcaccg
      841 gcgccgccag caggtgcgtc agcaggtagg cgagctgctc gacgctccgc ccatgcttcg
      901 cctcgtcgcg cggcacgtcg aacgacacgt tgtagtgcgc gctgaatccc accagccgca
      961 cctcgcgccc cgtctccgcc tcccaggcgt cgagctctcc acgcaggaag gcgaggctct
     1021 cccacagcga gcgggtcccc cgtgcgccgc agccgcgcgc gatctcgatc atcggcgtcg
     1081 cgatctccat cacgccggtg tcgaagtaga gcgcgccgcc ggtgggcagg tgatacgacc
     1141 gacccgtgcg atgcacgagc ggaccgcgca cgatggcgcg cggcgagccg aacacatcct
     1201 ccggcttctg aggtacgccg tcgatcacgg tggagaattc ggcttcgagc ccgatggcgg
     1261 gcaggccgcc gcccacggtg gcggaaccct gccgccccgt gcgcgccacc cgctcgcttc
     1321 gccgtgcccg tttctgccgt tccgccatgt cttcgctgtc ctctggatgc aactcgctac
     1381 gctcggcccg cgccatcagt ggcggggttc acaacggatc gcccaccagc ttgacgttgt
     1441 acgtctcgcc cgccgcctcg cggggaacgg agaccacgta cccgagatcc aggtgcaggt
     1501 ggtcgtccgt cttccatgac tcggggccga gggggcgcgt ccaggccgtc ggcagcacct
     1561 cgcgcacgat cgccgcatac ttcgcgatcg tctcgtgcga atccaggtac gtatccccta
     1621 cacggtaaat gttggccgcc gtgccccagc aatgcggtga cgcacctccc gttcgcgcgt
     1681 ggcggggtga gcagtagccg ccgttggccc cgatgtagac gtacgagccc acggcctccc
     1741 ggaactgctc cagcgccagc gccagcagtg ctgttgcgca tgggatgtac cgcggaaaca
     1801 cgcgaagcgg cggggcctcc cgcacgtcgg tgtggatgaa ctcggagacc gcgaagtgcg
     1861 gcgcgagata cgtgtcgctc gcctgctccc aggacgtgac ctcgtagaag tagcgcggca
     1921 gctggcgcgc ctgcccctga ttgtcgcaga ggatgccgcc gggaaggaga gcgtcgcgat
     1981 actggcgctc gaggcgccgc ccatcgacca gccggagcgg aaaggacgcg acgttggtgg
     2041 ccatcagtcg cggtctccga tcagggcggc atacgccagg tacgacgccg cggcgatcgt
     2101 cgccgagcgg ccgggggtgg acggctccca ctcggtgagc acggccaggg cgtacggctt
     2161 ccggtccggc aggtacacca ggccggcgtc atgggcgatc gtcgagatct cgccggtctt
     2221 gtgggccacg cgcgcttcgc gcggcagccc cgccgggatg ccgctcttga aatgctggcc
     2281 gtgcaggacg tcgaccatct gccgcgagag cgtcggcgag aaggcccgct cctcgccgat
     2341 gagcttgagc agcccgacca ggccgttggc cgtgacccgg ttgttgatgc cgtgctcgaa
     2401 cgccagctcg tcttccaccc cgcgccggag atcgaggccg tcgaggccga agccgtccag
     2461 cgtctgctgg agcacgtcga gccccacgag atccagcagg aggttcgtcg ccaggttgct
     2521 gctggacgtg atcatgtgct cggcgagctc cgccacccgc agcgtccggc cgatctcgcg
     2581 gtgcacttcc gcgttggcgt cgcggtccac ccgcacccgg tacggcgacc cgtcgtaggc
     2641 gctcaggaac cggttgcgga cgtgcacccg cgactgcggc agcaggtcgc cgcgatggat
     2701 cgccccgtac acgcccacga ggatggcgag cttgatcgtg ctcgccgcat ggaaccagcg
     2761 gtcggcgtga taggcgaacc gggcgcccga ctccaggtcg ctgatggcga tggccagggc
     2821 gcgcgcgctg gatttcgtct ccagctcggc gaaccgggcg tggagctccg tgggggcgtc
     2881 gaggggcgga acggggggtt tcgcgggggc gcgggaggac atggcgggca gtgcaggagc
     2941 aaggcaggtg ccgtggatca cggtgcgtcg ggtcgccgca tcttcgctgg ttgtgacgcg
     3001 cgaagacaat ggcctgtgcc accgatcaca gggttcctgg cgtactcggc gatattttct
     3061 tgacgtacga atattccgtg accccacgat gacgcgtggc gtcctcactg tagctgcacc
     3121 tgggaccacc ccccgacgct gggagatggc aatgcacgaa gctttcgatc ccctgaccga
     3181 ggtcagggct gaacgattcc gcgcgctggt ggccgagctc atgcccaaga tcaggcgcgt
     3241 gagccccacc ctgaccgacg accagctgcg cgccgccgcc gagttgatgg cggaataccg
     3301 cctcgccgac gaagagctgg ggaagaacgc cctctagcgc catgtcgacg ccgccgcgcg
     3361 cctcgccgtc cgtcccccca cgcagcacgt cgcattccct cgtcgacacg ctggtgcggc
     3421 accgcgacct gctgctcgag gagtggcggc gcgcgctggt gcccgccgac gccgactcgc
     3481 tgcgccgtgg gagtgccgcc tgcgatccga tggcgcacgt cgtggacgcc ctgctcgccg
     3541 atctcgaacg cgacgtccgc gatccgatga tcgcgccgga gtccgtgttc gc
//
LOCUS       DASSYW010000565         2175 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_851704, whole genome shotgun sequence.
ACCESSION   DASSYW010000565 DASSYW010000000
VERSION     DASSYW010000565.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2175)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2175)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2175
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_851704"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..858
                     /locus_tag="VFN38_09005"
     CDS             <1..858
                     /locus_tag="VFN38_09005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011941.1"
                     /translation="GIAAKLASGATPAAVLGFDAVEHGARKGGSPKKSDDLVFNPLNP
                     RAARDNFLQGAVDILQALRVASIALTAASSPTGAAIVFDPGALAFFGHSQGSTSGEIA
                     LAWSGAAPAAVLSGAGAHLTSSLLDKTMPVNISSGMEFLIGETLEAEHPVMTIFQSFF
                     DRSDPLNYNPLIITRPPATIPSKHVYMSWGKGDTYTPRSTLEANARSLGLSPVGTVLE
                     PFDRDPIVRPVTANLTGGDTIKRTAAVFQYPADGYDGHFVATKNASAQTDWVAFLQSY
                     LATGTPAIP"
     gene            872..>2175
                     /locus_tag="VFN38_09010"
     CDS             872..>2175
                     /locus_tag="VFN38_09010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011942.1"
                     /translation="MKSTAATTLLLATVAGAALLSVRPAAAQAQEPSVVTTPPAATPP
                     AAPLSAAQLLAGADAAVDAGNLEQATALYDQIARNYPGAPEAGEARRALKILGARQIQ
                     PLPPGQAPAPGVTAVSPAAPPPAGTVGVVVRREPYSLLTSEKLRLSTWEKMDFGVTSF
                     LYGMSVGFSLTLAQNNGDQSVGPVALGAIAYTLGAVAYLNLGDPDRGDLPLALAITSF
                     LPTTTLLVANIASTNPDEKAVSLATGVVGLLSVPVAIVAARNLELDPGDTQLVRDAGF
                     WGLVLGTTGMLAFGGETRTEYNYTSYHEPSNRKLFTGSLIGLYGGLALGTVGAVSSEV
                     SLERVRVSTWGGYGGAVIGLLLGASSDSDKGAWTGITVGALGGLLITFLSTSSLDGIP
                     PDDATVARRTPRRPRLLPRWRDLAPAVAPVADANGGARTAFGV"
BASE COUNT          302 a          811 c          752 g          310 t
ORIGIN      
        1 ggcatcgccg ccaagctggc gtccggggcg acgcccgccg cagtgctggg gttcgatgcg
       61 gtcgaacatg gcgcgcgcaa gggcggctcg ccgaagaagt ccgacgatct ggtgttcaac
      121 ccgctcaacc cgcgcgccgc gcgcgacaat ttcctgcagg gcgccgtcga catcctccag
      181 gcgctgcgcg tcgcctcgat cgcgctgacg gcggcatcgt caccgaccgg cgcggcgatc
      241 gtgttcgatc ccggcgcgct cgcgttcttc gggcactcgc agggcagcac gtcgggggag
      301 atcgcgctcg cctggagcgg cgccgcgccg gcggcggtcc tttcgggcgc gggtgcgcac
      361 ctgacgtcgt cgctgctcga caagacgatg ccggtcaaca tctcgtccgg gatggagttc
      421 ctgatcggcg agacgctcga ggccgagcac ccggtgatga ccatcttcca gagcttcttc
      481 gaccggtcgg atccgctgaa ctacaacccg ctgatcatca cgcgaccgcc cgcgacgatt
      541 ccgtccaagc acgtctacat gtcgtggggc aagggcgaca cgtacacgcc acgctcgacg
      601 ctggaggcga acgcgcgctc gctcggcctg tcgccggtcg gcacggtgct cgagcccttc
      661 gaccgagatc cgatcgtgcg ccccgtcacg gcgaacctga cgggcggtga cacgatcaaa
      721 cggaccgccg ctgtgtttca atatccggcg gatggctacg acggtcactt cgtcgccacg
      781 aagaacgcgt cggcccagac cgactgggtg gcgttcctgc agtcgtacct cgccaccgga
      841 acgccggcca ttccatgacg agcgccgcgg catgaagtcg accgccgcca cgacgctgct
      901 gctcgccacc gtcgccggcg cggccctgct gtcggtgcgg cccgcagcgg cgcaagcgca
      961 ggagccgtcg gtggtcacga cgccgcccgc cgcgacgccg cccgccgcac cgctgtcggc
     1021 ggcgcagctg ctggcgggcg cggacgccgc ggtcgacgcg ggaaacctgg agcaagcgac
     1081 cgccctctac gaccagatcg cgcgcaatta cccgggggcg cccgaggcgg gcgaggcgcg
     1141 ccgcgcgctc aagatcctgg gggcccggca gatccagccg ctgccgcccg gacaggcgcc
     1201 cgcgccgggc gtgaccgcgg tgtcgccagc cgcgccgccg cccgccggca ccgtcggtgt
     1261 cgtggtccgc cgcgagcctt actcgctgct cacctcggag aagcttcgcc tcagcacctg
     1321 ggagaagatg gacttcggcg tcacgtcgtt cctgtacgga atgtccgtcg gcttctcgtt
     1381 gacgctcgcc cagaacaacg gcgatcagag cgtgggaccg gtcgcgctgg gcgcgatcgc
     1441 ctacacgctg ggcgccgtcg cctacctgaa cctcggcgat cccgaccgcg gcgatctccc
     1501 actggcgctc gccatcacct cgttcctccc cacgacgacg ctgctggtcg ccaacatcgc
     1561 cagcaccaat cccgacgaga aggccgtcag cctcgccacc ggcgtcgtcg gcctgctctc
     1621 ggtgccggtt gcgatcgtcg cggcacgcaa tctggagctc gatcccggcg acacgcagct
     1681 ggtgcgcgac gccggcttct gggggctggt gctgggcacc accggcatgc tggcgttcgg
     1741 cggcgaaacg aggaccgagt acaactacac ctcgtaccac gagccgtcca accgcaagct
     1801 gttcacgggc agcctgatcg gcctctacgg cggcctcgcg ctgggcaccg tcggcgcggt
     1861 gtccagcgag gtctcgctgg agcgcgtgcg cgtgtcgacc tggggcggct acggcggcgc
     1921 cgtcatcggc ctgctgctgg gcgcgtcgtc ggacagcgac aagggcgcgt ggaccggcat
     1981 cacggtgggc gccctgggcg gcctgctgat cacgttcctg tcgaccagca gcctcgacgg
     2041 catcccgccc gacgacgcga ccgtcgcgcg gcgcaccccg cgccggccgc ggctgctgcc
     2101 ccgctggcgg gacctggcgc cggcggtggc gccggtcgcc gacgcgaacg gcggcgcgcg
     2161 caccgcgttc ggcgt
//
LOCUS       DASSYW010000566         3338 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_279640, whole genome shotgun sequence.
ACCESSION   DASSYW010000566 DASSYW010000000
VERSION     DASSYW010000566.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3338)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3338)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3338
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_279640"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..569
                     /locus_tag="VFN38_09015"
     CDS             <1..569
                     /locus_tag="VFN38_09015"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HET9011943.1"
                     /translation="GIINGGRQLLEQVGEILTYARGAANQLTVTPARFDLRAVVSQIC
                     ALNESLASRKGLTLVSDVPSTLTPLVADREKVAHIVGNLLGNAIDFTPRGGRVWVKAH
                     ELTAGTEHECLVEVGDTGIGIDPEHHELVFREFAQVDASASRQHHGTGLGLTIARKLV
                     ELHGGRIWLESRLGEGSRFFFTIPYTAV"
     gene            596..958
                     /locus_tag="VFN38_09020"
     CDS             596..958
                     /locus_tag="VFN38_09020"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HET9011944.1"
                     /translation="MLVAEDNDLVAGAMRVLFEETGHRVSTTPSIVETVRVAMSDPVD
                     LLLLDLGLADGDGFDVLAQLTDRGAMPRVAVALTGRDEPDVVARCRAMGCADVLLKPV
                     PARHLVAKAREWLGRDRA"
     gene            1022..2272
                     /locus_tag="VFN38_09025"
     CDS             1022..2272
                     /locus_tag="VFN38_09025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011945.1"
                     /translation="MSSRIVTTLRVIAGAIVGAIVGSIIVLVIASAVAEALGRDGGGA
                     VGMIMMFYGVPLAILVGGILGGWAAGRGRSSGIFRFTAVTALALTGLAIMLAIALPKN
                     TPKPVVDVKGCTISPRIGSFAVSNDSRYVVVYDRYCSGGEGHTVNVSDVPTSQDSILG
                     PGNILVLAGDEKIEAATLAHQVDAYARIRDSLHMEIRFDHRAHVLSQASPVLGYEIDF
                     QPTIGLPLPAPQPPEMPAALKALIEAQRDSFAARDAAMAPPPPPVARVDPQQLVARRE
                     SLMARRQRPMEPWVSTDTDGCTIRKRYGYQPFAFTYVVYERICPTEPQRTINLSQVAP
                     SAPVNGPGNVLVLVNDEPARSDSAAVYIPVSITPRDARHVDIVYAGRFHPLSSGSLVQ
                     GVKFTFRADSNFRTPGPPVSTGGP"
     gene            complement(2256..2984)
                     /locus_tag="VFN38_09030"
     CDS             complement(2256..2984)
                     /locus_tag="VFN38_09030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcdA"
                     /protein_id="HET9011946.1"
                     /translation="MTEPASLGLALAFGAGLLSFVSPCVLPLIPSYLTFVTGVGFDDL
                     GTSRRAALIHALLFVLGFTLIFVALGASATILGRVLIAYRVWITRLGGALVVLFGLYL
                     LGLVKVSAFDRERRVHLANKPLGYLGTVLVGVAFGAGWTPCLGPILGAILTYTAAQAD
                     LSRGLPLLFAYSLGLALPFLLAAVAVERFLETVARVRPYLARIGQVSGALLVLVGVLM
                     MLDYFTLMASYLQAVTPAAIRDRL"
     gene            complement(3000..>3338)
                     /locus_tag="VFN38_09035"
     CDS             complement(3000..>3338)
                     /locus_tag="VFN38_09035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011947.1"
                     /translation="AQSDEGGLAAEVVVPNEVPALSAAEGRDLHVAPPAAPARYVVYT
                     ARYRLTLKGMDRGKWEMSVTEEADAPLVTVDAVVRGVSRRSGDADETVRLSGDEFRAA
                     LPATAQPARA"
BASE COUNT          528 a         1152 c         1199 g          459 t
ORIGIN      
        1 ggggcatcat caacggcggg cgccagctgc tcgaacaggt gggggagatc ctgacctacg
       61 cgcgcggcgc cgccaaccag ctcaccgtga ccccggcgcg gttcgacctg cgcgccgtgg
      121 tgtcgcagat ctgcgcgctc aacgagtcgc tcgcgagccg gaagggactg acgctggtct
      181 ccgacgtgcc gtcgacgctg acgccgctcg tggccgaccg cgagaaggtg gcgcacatcg
      241 tcggcaacct gctcggcaac gcgatcgact tcacgccgcg tggcggacgc gtgtgggtga
      301 aggcgcacga gctcacggcg ggcacggagc acgagtgcct cgtcgaggtg ggcgacacgg
      361 ggatcggcat cgatcccgag caccacgagc tggtgttccg cgagttcgcg caggtggacg
      421 cgagcgcgtc gcggcaacat cacggcacgg ggctcggcct cacgatcgcg cgcaagctgg
      481 tggagctgca cgggggccgc atctggctgg agagccggct cggcgaaggg agccgtttct
      541 tcttcaccat cccctacacg gccgtctgac gacgccgacg tcctcgctgc cgcacgtgct
      601 ggtggccgag gacaacgacc tcgtggccgg cgcgatgcgc gtgctgttcg aggagaccgg
      661 gcatcgcgtg tcgacgacgc cgtccatcgt cgagaccgtg cgcgtcgcga tgagcgatcc
      721 ggtggatctc ctcctgctcg acctcgggct cgccgacggc gacggattcg acgtgctcgc
      781 gcagctgacg gatcgcggcg cgatgccacg tgtcgcggtg gcgctcacgg gacgcgacga
      841 gcccgacgtc gtggcgcggt gccgcgcgat gggctgcgcc gacgtgctcc tcaagccggt
      901 gccggcgcgc catctggtgg cgaaggcgcg ggagtggctg gggcgcgatc gggcgtgacc
      961 gccccgtgac cggtgggtga ggcgggcagt cattcccggc cctccctccg cccggtcctc
     1021 catgtcctcc cgcatcgtca cgaccctgcg cgtgatcgcc ggcgcgatcg tcggcgccat
     1081 cgtgggttcg atcatcgtgc tggtcatcgc ctccgcggtc gcggaggcgc tcggccgcga
     1141 cggcgggggc gcggtcggca tgatcatgat gttctacggc gtgccgctcg ccatcctcgt
     1201 cggcgggatc ctcggcggct gggcggccgg ccgtggacgc tcttcgggca tcttccggtt
     1261 cacggccgtg acggcgctcg cgctcacggg gctcgcgatc atgctggcca tcgcgctgcc
     1321 gaagaacacg ccgaagccgg tggtggacgt caagggctgc accatcagcc cgcgcatcgg
     1381 ctcgttcgcc gtcagcaacg attcgagata cgtcgtggtg tacgatcgct attgcagcgg
     1441 cggagaaggg cacaccgtga acgtctcgga cgtccccacg tcgcaggaca gcatcctcgg
     1501 cccgggcaac atcctggttc tcgccggcga cgagaagatc gaagcggcga cgctcgccca
     1561 tcaggtcgac gcgtatgcga ggatccgcga ctcgctgcac atggagatca ggttcgatca
     1621 tcgcgcgcac gtgctgagcc aggcgtcacc cgtgctgggc tacgagatcg acttccagcc
     1681 gaccatcggg ctcccgctcc cggctccgca accaccggag atgcctgccg cgctcaaggc
     1741 actcatcgag gcgcagcggg actcgttcgc cgcacgtgac gcagccatgg cgccgccacc
     1801 gccaccggtc gcccgggtgg atccgcaaca gctcgtggcg agacgcgagt ccctgatggc
     1861 ccggcggcag cgcccgatgg agccatgggt gtccaccgac accgacggct gcaccatccg
     1921 caagcgctac gggtatcagc cgttcgcctt cacgtacgtg gtgtacgaac ggatctgtcc
     1981 caccgagccg caacggacga tcaatctgtc gcaggtggca ccctcggcgc cggtgaacgg
     2041 accgggcaac gtcctcgtgc tcgtgaacga cgagcccgcg agaagcgact cggccgccgt
     2101 ctacatcccc gtctcgatca ccccgcggga cgcgcgccac gtcgacatcg tgtacgccgg
     2161 tcgatttcac ccgctgagca gcggctcgct cgtgcagggc gtaaagttca ccttccgcgc
     2221 cgactcgaat ttccggacgc cgggcccgcc ggtctctaca ggcggtccct gatcgcggcg
     2281 ggggtgacgg cctggaggta cgacgccatg agcgtgaagt agtccaacat catcagcacg
     2341 ccgacgagca cgagcagcgc gccgctcacc tggccgatgc gcgcgaggta gggccgcacg
     2401 cgggcgacgg tctcgagaaa ccgctccacc gcgaccgcgg cgagcaggaa gggaagcgcg
     2461 aggcccagcg aatacgcgaa gagcagcggc aacccgcgcg acaggtccgc ctgcgccgcc
     2521 gtgtaggtga ggatcgcgcc gaggatgggc ccgagacagg gcgtccaccc cgcgccgaag
     2581 gcgacgccca cgagcaccgt gccgaggtag ccgagcggct tgttcgcgag gtgcacgcgc
     2641 cgctcgcggt cgaaggcgga gaccttcacg agaccgagca ggtacaggcc gaacagcacg
     2701 acgagcgcgc cgccgaggcg ggtgatccac acgcggtacg cgatgagcac gcggccgagg
     2761 atcgtcgccg aagcgccgag ggcgacgaag atgagcgtga agccgaggac gaacagcagc
     2821 gcgtggatca gcgcggcgcg gcgcgaggtg cccagatcgt cgaaccccac gccggtgacg
     2881 aaggtgaggt agctcgggat gagcggcagc acgcagggcg acacgaagct gagcagcccc
     2941 gcgccgaagg cgagggcgag accgagcgag gcgggttcgg tcatggggcg atcggcgcgc
     3001 tatgcgcgcg ccggctgggc ggtcgccggg agcgcggcgc ggaactcgtc gcccgaaagg
     3061 cgcaccgtct cgtcggcgtc gccggagcgg cgcgacacgc cgcgcacgac ggcgtccacg
     3121 gtcacgaggg gcgcgtcggc ctcctcggtc accgacatct cccacttgcc gcggtccatc
     3181 cccttcagcg tgaggcgata ccgcgcggtg tagacgacgt agcgcgcggg ggcggcggga
     3241 ggggcaacgt gcaggtccct cccttcggct gcgctcaggg caggcacttc gttcgggacg
     3301 acaacctcgg cagccaatcc gccttcatcg ctctgtgc
//
LOCUS       DASSYW010000567         2131 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_332070, whole genome shotgun sequence.
ACCESSION   DASSYW010000567 DASSYW010000000
VERSION     DASSYW010000567.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2131)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2131)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2131
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_332070"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(198..>2131)
                     /locus_tag="VFN38_09040"
     CDS             complement(198..>2131)
                     /locus_tag="VFN38_09040"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: protein motif:HMM:NF005122.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004748 - ribonucleoside-diphosphate
                     reductase activity, thioredoxin disulfide as acceptor
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="vitamin B12-dependent ribonucleotide reductase"
                     /protein_id="HET9011948.1"
                     /translation="RDGSVVDTVKARDLWRDIATAAWECGDPGLQYDTTVNAWHTSSG
                     TARINASNPCSEYMYLDDSACNLASLNLRKFVVAEGSPNAGEFDVESFRQAVATTIIG
                     QEIIVGNARYPTEKIAANSHRFRPLGLGYANLGALLMSRGLPYDSAPARAYAGAITSI
                     LTGWAYRTSAVISREVTGPFDGYAENREPFIGVMQKHRRAVDKIESTHVPANMMDAAR
                     DAWDQTLSIGKEFGYRNGQATVLAPTGTIGFMMDCDTTGIEPDIALIKYKRLVGGGMI
                     KIVNNTITEALAKLGYDEAQTKAIVEYIDTEETIEGAPGLKPEHLPVFDCAFRAANGT
                     RSIHFQGHIRMMAAAQPFISGAISKTVNLPADSTIEDVQDAYMESWKQGLKAVAIYRD
                     GCKRTQPLSTSKTDPGLGKAAAAVAEAPISGPPAAVRKKLPDERQSLTHKFSIAGHEG
                     YIHVGLYETGEPGEIFVKMAKEGSTISGLMDSFATAISLALQHGVPVRLLCDKFSRTR
                     FEPYGFTENPDIPRASSIMDYLFRYLASKFVKQDTPGAEAAPVEAAAAPATAEIQRVA
                     EVVAAAQTIEVVDDRRATPRNGHANGHKNGGSSSTGNGNYSFIARTDAPTCPECGSIM
                     IPNGSCHKCVNCGTTSGCS"
BASE COUNT          288 a          734 c          714 g          395 t
ORIGIN      
        1 ttgcgcgaac agcgcggcgg tcaggtcgcc catcgcgatc aatgcgaacg cgctctgacg
       61 ctcgacttcc gcgtagaaca ctctgcgaat gtgatcttcc acgtcgtgga tttccttcgt
      121 acgccgcggg ccctcaccct aaccctctcc cgcaagcggg agaggggatc agagcgccgc
      181 ggtgcgagtg gcgggaacta cgagcagccg ctggtggtgc cgcagttgac gcacttgtgg
      241 cagctcccgt tggggatcat gatcgatccg cattcggggc aggtgggcgc gtcggtgcgg
      301 gcgatgaagc tgtagttgcc gttgccggtg ctgctgctgc cgccgttctt gtggccgttg
      361 gcgtggccgt tgcgcggggt ggcgcgccgg tcgtccacga cctcgatcgt ctgggcggcg
      421 gcgacgacct cggcgacgcg ctggatctcc gcggtcgcgg gggccgcggc cgcttcgacc
      481 ggcgccgcct cggcccccgg cgtgtcctgc ttcacgaact tcgacgccag gtacctgaac
      541 aggtagtcca tgatcgagct ggcccgcggg atgtccgggt tctcggtgaa gccgtaaggc
      601 tcgaagcgcg tgcgcgagaa cttgtcgcac agcaggcgca ccggcacgcc gtgctgcaac
      661 gccagcgaga tcgccgtcgc gaagctgtcc atgaggcccg agatcgtcga gccctccttg
      721 gccatcttca cgaagatctc gcccggctcg ccggtctcgt acaggcccac gtggatgtag
      781 ccctcgtggc ccgcgatcga gaacttgtgc gtcagcgact gccgctcgtc gggcagcttc
      841 ttccggaccg ccgccggcgg tccgctgatc ggcgcctccg cgactgccgc agccgcttta
      901 cccaggcccg ggtcggtctt gctggtcgac agcggctgcg tccgcttgca gccgtcgcgg
      961 tagatcgcga ccgccttcag gccctgcttc cacgactcca tgtacgcgtc ctgcacgtcc
     1021 tcgatggtcg agtccgccgg caggttgacc gtcttcgaga tcgcgcccga gatgaacggc
     1081 tgcgccgccg ccatcatgcg gatgtgaccc tggaagtgga tcgaccgcgt tccgttcgcc
     1141 gctcggaacg cgcagtcgaa cacgggcagg tgctcgggct tcaggcccgg cgccccctcg
     1201 atcgtctcct cggtgtcgat gtactcgacg atcgccttcg tctgcgcctc gtcgtagccc
     1261 aacttggcca gcgcctcggt gatcgtgttg ttgacgatct tgatcatgcc gccgcccacc
     1321 agccgcttgt acttgatgag cgcgatgtcc ggttcgatac cggtcgtgtc gcagtccatc
     1381 atgaagccga tggtccccgt cggcgccagc accgtcgcct ggccgttgcg gtagccgaac
     1441 tccttgccga tcgacaacgt ctgatcccag gcgtcgcggg cggcgtccat catgttcgcc
     1501 ggcacgtgcg tcgactcgat cttgtcgacc gcgcggcgat gcttctgcat gacgccgatg
     1561 aacggctcgc ggttctcggc gtagccgtcg aacggtccgg tcacctcacg cgagatcacc
     1621 gcgctggtgc ggtacgccca gcccgtcagg atcgacgtga tcgcgcccgc gtaggcgcgc
     1681 gccggcgcgc tgtcgtaggg caggccgcgc gacatcagca gcgcgcccag gttggcgtag
     1741 ccgaggccca gcggccggaa gcggtgcgag ttcgccgcga tcttctcggt cgggtacctc
     1801 gcgttgccga cgatgatctc ctgaccgatg atcgtggtcg ccaccgcctg gcggaacgac
     1861 tcgacgtcga actcgccggc gttcgggctg ccttcggcga cgacgaactt gcgcaggttc
     1921 agcgacgcca ggttgcacgc cgaatcgtcg aggtacatgt actcgctgca cgggttggac
     1981 gcgttgatgc gcgccgtgcc cgacgacgtg tgccacgcgt tgacggtcgt gtcgtactgc
     2041 aggccggggt cgccgcactc ccacgccgcc gtggcgatgt cacgccacag gtcgcgcgcc
     2101 ttcacggtgt cgaccacgct gccgtcgcgc g
//
LOCUS       DASSYW010000568         3633 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_28260, whole genome shotgun sequence.
ACCESSION   DASSYW010000568 DASSYW010000000
VERSION     DASSYW010000568.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3633)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3633)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3633
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_28260"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..219)
                     /locus_tag="VFN38_09045"
     CDS             complement(<1..219)
                     /locus_tag="VFN38_09045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011949.1"
                     /translation="MRSSLSFTLVALTLVAATTPAVAQRRSFDDDAEWLANCRSGNWY
                     GDADRGRACEVRPVAVQLSGRSLEVDGRK"
     gene            398..772
                     /locus_tag="VFN38_09050"
     CDS             398..772
                     /locus_tag="VFN38_09050"
                     /inference="COORDINATES: protein motif:HMM:NF015898.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BlaI/MecI/CopY family transcriptional regulator"
                     /protein_id="HET9011950.1"
                     /translation="MDDIYFPPRELEVMSVLWRLGSATVTEVRDQLETGLAYTSVLSA
                     LQTLEEKGYVRHEPEGRAYRYYAVVGAERAGGSALARIRDAIFHGSAERMFAQLVSDR
                     KLGREELERMRRLLADRLKEEA"
     gene            769..2250
                     /locus_tag="VFN38_09055"
     CDS             769..2250
                     /locus_tag="VFN38_09055"
                     /inference="COORDINATES: protein motif:HMM:NF017390.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M56 family metallopeptidase"
                     /protein_id="HET9011951.1"
                     /translation="MSAGWLVYALVTGAAIALAASALDGLARARRWPTRWIWAGAMLA
                     TLGVVFSAAFARGDAGPVALPTPIASGAAASAAAQSSALVSLVRDVGAIVDSGLIVVA
                     AAAARWVPATPAGAAGVAWLLAVVAALATLGFVHVRLQRARRAWPSAELHGRRVLVAP
                     TEGPAVVGVVRPEIVVPRWLLARDAEEQRLVLAHEDEHVRARDHLLLGGACVAVALMP
                     WHPVAWWSLSRLRLGIELDCDARVLRRGVHARSYGEMLIDLAGQCSGFRVGATALADK
                     TSHLERRLLAMKPITKRFALVRSGALCGAAALSLVVACEARVPTSAEIQSMDVAGAER
                     TAARTGLIDAIHGVKTEFYVNGAKVTAAEAHAVPASDIATVDVRKGKGAGDASVISIR
                     TVATSAGGMKYRSASPDGAPSPAGVGLKGQHDKMMSSHDTFSGIVLIDGARADAAAFH
                     RLDPQDIVAVEIIKGDAAAQLSSEPAAKSGIVKVTTKGARKTG"
     gene            complement(2360..3487)
                     /locus_tag="VFN38_09060"
     CDS             complement(2360..3487)
                     /locus_tag="VFN38_09060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HET9011952.1"
                     /translation="MLSEDEIAFRDAVAGFAAEEVKPRVGAMERAGKVDPALVKQYFE
                     MGLMGIEVPEQYGGAGGSLMMVTLAVEEISKHDAAAAIVVDVQNTLVNYPINRYGSDA
                     LKAKYLPRLTSDTIGAYALSEPGSGSDAFGMTTRAVKKGDAWVLTGRKMWITNGAEAG
                     IYIVFANTDPAAGYKGITAFIVEREFKGFAVGKKEDKLGIRASSTTELILDGVEVPPE
                     NVLGPVGQGYKVAIETLNEGRIGIGAQMIGVSQGALAAATAYVKDRHQFGKALAEFQG
                     IQFQLAQARTETEAARLMVYNAARLKDAGQDISMEGAMSKLFSSQVAERVTSISLELF
                     GGYGYTTDYPAEKFYRDAKIGAIYEGTSNMQLNTIAKVMLK"
BASE COUNT          526 a         1249 c         1275 g          583 t
ORIGIN      
        1 ctttctgccg tcgacctcca gcgaccgacc gctcagctgc acggccacgg gacggacttc
       61 gcaggcgcgc ccgcgatcgg cgtcgccgta ccagttgccg ctgcggcagt tggccagcca
      121 ctccgcatcg tcgtcgaacg agcggcgttg ggcgacggcg ggcgtcgtcg cggcgaccag
      181 cgtcagggcg acgagagtga acgacaggga cgagcgcatc gggattctcc gggtgggcgt
      241 atccctgaga caacgcgatg cggccgacag ttggaccggc ccgacggtcg acgaacggcg
      301 gagtgcggtg cacggtcgtg cccgcgcagc tacggaaaaa gcagttgaca acggatccca
      361 gccgccgtat gctacggaag aacccgtagg agagaccatg gacgacatct actttccccc
      421 gcgcgagctc gaggtcatga gcgtcctctg gcgactcggt tccgccacgg tcaccgaggt
      481 ccgcgaccag ctcgagaccg ggctcgccta cacctccgtg ctctctgcgc tccagacgct
      541 cgaggagaag gggtacgtcc ggcacgagcc ggaaggccgc gcataccgct actacgcggt
      601 cgtcggcgcc gagcgcgccg gcggcagcgc gctcgcccgc atccgcgacg cgatcttcca
      661 cggctcggcc gagcggatgt tcgcgcagct cgtcagcgat cgaaagctcg gacgtgaaga
      721 gctggagcgc atgcgccggc tgctcgccga tcggctgaag gaggaagcat gagcgccggc
      781 tggctggtct acgcgctcgt caccggcgcc gcgatcgcgc ttgccgcgtc cgcgctcgac
      841 gggctggctc gcgctcggcg gtggcccacg cgctggatct gggccggcgc catgctggcc
      901 acgctgggcg tcgtgttcag cgcggcgttc gctcgcggtg atgccggacc ggtcgcgctt
      961 cccacgccga tcgcgagcgg tgcggcggcc agcgccgcgg cacagtcgtc ggccctggta
     1021 tcgctggtgc gtgacgtcgg cgcgatcgtg gactccgggc tgatcgtcgt ggcggccgcc
     1081 gccgcgcggt gggtaccggc gacgcccgcc ggtgcggccg gagtggcgtg gctcctcgcc
     1141 gtcgtcgcgg cgctcgcgac gctcggcttc gtgcacgtgc gactgcagcg cgcgcggcgc
     1201 gcctggccga gcgcggagct gcacggccgg cgcgtgctgg tggcgccgac ggaagggccg
     1261 gccgtggtcg gcgtcgtgcg cccggagatc gtggtgccgc gctggctcct ggcacgcgat
     1321 gccgaggagc agcggctcgt cctggcgcac gaggacgaac acgtgcgcgc acgcgatcac
     1381 ctgctgctcg gcggcgcgtg cgtcgccgtc gcgctgatgc catggcatcc ggtggcgtgg
     1441 tggtcgctgt cgcggctccg gcttgggatc gagctggatt gcgatgcgcg cgtgctgcgc
     1501 cgaggtgttc acgcgcggtc atacggagag atgctcatcg acctggccgg acagtgctcc
     1561 ggatttcggg tgggcgcgac cgcgctcgcc gacaagacct cgcacctcga aaggaggttg
     1621 ctcgccatga agccgatcac gaagcggttc gccctcgtcc gcagcggcgc gctgtgcggc
     1681 gccgccgccc tgtcactcgt cgtcgcctgc gaggcccgcg tccccacgtc ggccgagatc
     1741 cagtcgatgg acgtcgcggg cgccgagcgc accgccgcgc ggacgggatt gatcgacgcc
     1801 atccacggcg tgaagacgga gttctacgtc aacggcgcga aggtcacggc ggcggaggcg
     1861 cacgccgtgc cggcgagcga catcgcgacg gtggacgtgc gcaaggggaa gggggcgggc
     1921 gatgcatcgg tcatcagcat ccgcaccgtg gccacgagcg cgggcggcat gaagtatcgg
     1981 agcgcaagtc ccgatggcgc gccgtccccg gcgggggtgg ggctcaaggg gcagcacgac
     2041 aagatgatgt cgagccacga cacgttcagc ggcatcgtcc tcatcgacgg cgcgcgcgcc
     2101 gatgccgcgg cgttccaccg cctcgacccg caggacatcg tcgcggtgga gatcatcaag
     2161 ggcgacgcgg cggcccagct ctccagcgaa cccgcggcga agagcggcat cgtgaaggtg
     2221 acgacgaagg gcgcacggaa gacggggtga ccggggacgg gacgaccgga tgacgggatg
     2281 acgggaacgg tgaagggcac accatgcgga gtctggtgtg cccttcctgt catcccgtcc
     2341 atccgtcatc ccgtcatccc tatttcagca tcaccttcgc gatcgtgttg agctgcatgt
     2401 tgctcgtgcc ctcgtagatc gccccgatct tggcgtcgcg gtagaacttt tccgccggat
     2461 agtcggtggt gtagccgtac ccgccgaaca gctccagcga gatggacgtc acgcgctcgg
     2521 ccacctgcga ggagaagagc ttggacatcg ctccctccat ggagatgtcc tgacccgcat
     2581 ccttgagccg tgcggcgttg tagaccatga ggcgtgcggc ctccgtctcc gtccgtgcct
     2641 gcgcgagctg aaactggatg ccctggaact cggccagcgc ctttccgaac tgatgccgat
     2701 ccttcacgta cgccgtggcc gccgcgagcg cgccctggct gacgccgatc atctgggcgc
     2761 cgatgccgat gcgtccctcg ttgagcgtct cgatcgccac cttgtagccc tggcccacgg
     2821 gcccgaggac gttctccggc ggcacttcga caccgtcgag gatcagctcc gtggtgctgc
     2881 tcgcgcggat gccgagcttg tcctccttct tgccgacggc gaaccccttg aactcgcgct
     2941 cgacgatgaa cgccgtgatc cccttgtagc cggcggcggg atcggtgttg gcgaagacga
     3001 tgtagatccc cgcttcggcg ccgttggtga tccacatctt gcgccccgtg agcacccatg
     3061 cgtcgccctt cttcacggcg cgtgtggtca tgccgaaggc gtcggacccc gagcccggct
     3121 cgctcaacgc gtatgcgccg atcgtgtcgc tggtcagccg cggcagatac ttcgccttga
     3181 gcgcatcgct gccgtaccgg ttgatcgggt agttgacgag cgtgttctgc acgtcgacga
     3241 cgatcgcggc ggcggcgtcg tgcttgctga tctcctccac ggcgagggtc accatcatga
     3301 gcgagccgcc ggcgccgccg tactgctcgg gcacctcgat ccccatgagg cccatctcga
     3361 aatactgctt gacgagggcg gggtcgacct tgccggcgcg ctccatcgcg ccgacgcgag
     3421 gcttcacttc ctcggcggcg aacccggcga cggcatcgcg gaaggcgatc tcgtcttccg
     3481 acaggatggt gagcggcgcg gtggacgcag cttccgtcgc gcgctgagcc cctgaacttc
     3541 acctcgacga cgccgatgtc ctccgacacc gaagtctccc gtccgcccct caccattctt
     3601 tccgacgacg agaccgcgtt ccgcgacgcc gtc
//
LOCUS       DASSYW010000569         3157 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_46855, whole genome shotgun sequence.
ACCESSION   DASSYW010000569 DASSYW010000000
VERSION     DASSYW010000569.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3157)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3157)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3157
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_46855"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1529)
                     /locus_tag="VFN38_09065"
     CDS             complement(<1..1529)
                     /locus_tag="VFN38_09065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="BatD family protein"
                     /protein_id="HET9011953.1"
                     /translation="MIGLVLAAQLAIVARAPDTAVTCLPFEITVAARTPGASAPRVEL
                     PPSAILQLLRTRSASRVERDALGRETTLTEVTLLVAANATGRIAVPPLTVVANGAMGR
                     STPLSVDVRPAETATPLVLVRATLDAGEPRRADTLYVGQQVDYVVDVQLNETARDRLR
                     HNPTFFPPEMPAVLAYDLAPPAPVVRAGRRCFETLSYRRALFPLFPGTTTIPPATLSY
                     SLPLSTSFFSREESFELRTDSVGFVAVDPPAQGRPADYAGAVGVFQATSRLDEPSGRM
                     GDPVVLTLRLSGTGNVKLLPRPVITVDWATIALGDERVVVDTTSPRVRGTKEFDWLLT
                     PRRAGRLTVPPFHYPYFDPATRAYGVASADSSAFEVAAATLASADTGAVTRLPIRAVL
                     RPERAPPLASRPWYWALLLIAPVPATLRRVLVRRRRRSAHHTAARRLRALGAAKRPPS
                     PRELRRTYLDAIRERVPAVGAASLARLPLARLLRRAGVTESTAHAAEVVLERLDRAAF
                     SP"
     gene            complement(1537..>3157)
                     /locus_tag="VFN38_09070"
     CDS             complement(1537..>3157)
                     /locus_tag="VFN38_09070"
                     /inference="COORDINATES: protein motif:HMM:NF012321.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HET9011954.1"
                     /translation="PVLFVWLLRRNRVQRQRRLARLGALDVVRRLVPAVAFSGGRWRA
                     VRIALAAALAGLAIAGPRWGYERTTVRSTGVDLVFAVDASLSMMATDEKPSRLERVKQ
                     EIRRLRAMSPGDRVGLLAFAGKSYVLSPITVDGGALDLFLDNLDPSVVGQAGSSIAST
                     ITPGTNLLALTKSGADRALVVMTDGEGFELQDDVVAAAKRAAENNVSLVTVGFGTEQG
                     STIPIRENGTTTQKKDENGQVVVTHYKPDLLQAAALAANGTFIPAEATDKAARIKSAL
                     SKLRTQARTTQTGDNLTPRYQWFLLPAILLLWLDTILGGRHGRRRRRAASAETAVAAA
                     LLATVFLGGCTKSRDAFDGVAAYKAQDYQRAAALFKRAANEDKTPGSLYNYGTALLAM
                     DSTESAAEMLERAAEKADPETQYRARFNAGLAHLLRGLVAPGDSGSAELKLALADYKR
                     VLIQRPTDADAKWNYELALQQEKKGGGGGGGGQSDSSPAPAEQQPKPQPSLAQRQAEQ
                     LLGSAEREERDVQSKKQKQSRQEPPPGGKDW"
BASE COUNT          431 a         1125 c         1182 g          419 t
ORIGIN      
        1 ggcgagaagg cagcgcggtc gaggcgctcg agcacgacct ccgcggcgtg cgccgtggac
       61 tcggtgacgc ccgcgcggcg aaggagacga gccagcggca gccgggccag gctcgcggcg
      121 ccgacggcgg gcacgcgctc gcggatggca tcgagatagg tccgccgcag ctcacgcggc
      181 gacggtggtc gcttcgccgc gccgagggcg cggagacgac gcgcggcggt gtgatgcgcc
      241 gagcggcggc ggcgccggac gagcacgcgg cgcagcgtcg ccggcacggg ggcgatgagc
      301 aggagcgccc agtaccacgg acgcgaggcc agcggcggcg cccgctccgg ccggagcacg
      361 gcgcgaatgg gcagccgtgt cacggcgccg gtgtcggcgc tggcgagcgt ggccgccgcg
      421 acctcgaacg cgctcgagtc ggcggaggcg acgccgtagg cccgtgtcgc gggatcgaaa
      481 tacggatagt ggaatggcgg caccgtgagc cgtcccgcac gacgcggcgt caacagccag
      541 tcgaactcct tggtgccccg cacgcggggt gacgtcgtgt ccaccaccac gcgctcgtca
      601 cccagcgcga tcgtcgccca gtcgaccgtg atgaccgggc gcggcagaag cttcacgttg
      661 ccggtgcccg acaggcgcag cgtgagcacg accggatcac ccatgcgtcc cgacggttcg
      721 tcgagtcgcg acgtcgcctg aaagacaccc acggcgcctg catagtcggc ggggcgcccc
      781 tgcgccggcg gatcgacggc gacgaagccg acgctgtcgg tgcgcagctc gaagctctcc
      841 tcgcgcgaga agaacgacgt ggagagcggg agcgaatacg agagcgtggc agggggaatc
      901 gtcgtcgtgc ccggaaagag cgggaagagc gcgcggcggt acgagagcgt ctcgaagcag
      961 cggcggcccg cgcgcacgac cggcgccggc ggcgcgagat cgtacgcgag caccgccggc
     1021 atttcgggcg ggaagaacgt cggattgtgt cgcagtcgat ctcgcgccgt ctcgttgagc
     1081 tgcacgtcca ccacgtagtc gacctgctgg ccgacgtaca gcgtgtcggc ccgacgcggc
     1141 tcgccggcat cgagcgtggc gcgcacgagc acgagcggcg tggccgtctc ggccgggcgg
     1201 acgtcgacgg agagcggcgt cgagcgaccc atcgccccgt tcgcgaccac ggtgagcggc
     1261 ggcacggcga tgcggccggt cgcgttcgcc gcgacgagca gcgtgacctc ggtgagcgtc
     1321 gtctcgcggc ccagggcatc gcgctccacg cgcgaggccg agcgcgtgcg cagcagctgc
     1381 aggatcgcgc tcggcggcag ctccacgcgt ggcgccgacg cgccgggcgt gcgcgccgcc
     1441 acggtgatct cgaacggcag gcaggtgacc gccgtgtcgg gtgcgcgcgc gacgatggcc
     1501 agctgcgccg cgagcacgag gccgatcacg ggacggctac cagtccttgc cgcccggcgg
     1561 cggctcctga cggctctgct tctgcttctt gctctgcacg tcgcgctcct cccgctcggc
     1621 gctgccgagc agctgctcgg cctgccgctg cgccagggaa ggctgcggct tcggctgctg
     1681 ctcggccggc gcgggcgagg aatcggattg tccgccgccg ccaccgccgc cgcccttctt
     1741 ctcctgctgc agcgccagct cgtagttcca cttcgcgtcg gcgtcggtgg ggcgctggat
     1801 gagcacgcgc ttgtaatcgg cgagcgcgag cttcagctcg gccgatccgg agtcgcccgg
     1861 cgccacgagc ccacgcagca gatgcgcgag tccggcgttg aagcgcgcgc ggtactgcgt
     1921 ctccggatcg gccttctccg ccgcccgctc gagcatctcg gcggccgact cggtggagtc
     1981 catcgcgagc agcgcggtgc cgtagttgta gagggagccc ggcgtcttgt cttcgttcgc
     2041 ggcacgtttg aacagcgcgg cggcccgctg gtagtcctgc gccttgtacg ccgccacgcc
     2101 gtcgaacgca tcccggctct tcgtgcagcc gccgaggaag acggtcgcca ggagcgcggc
     2161 ggcgaccgcc gtctccgccg acgccgcgcg gcggcgccgc cggccgtgcc ggccgccgag
     2221 gatcgtgtcc agccacagca gcaggatggc ggggagcagg aaccactggt agcgcggcgt
     2281 gaggttgtcg cccgtctgcg tggtgcgcgc ctgcgtgcgc agcttcgaca gcgcgctctt
     2341 gatgcgcgcc gccttgtcgg tggcctcggc ggggatgaac gtgccgttcg cggcgagcgc
     2401 cgccgcctgg agcagatcgg gcttgtagtg cgtcaccacc acctggccgt tttcgtcctt
     2461 cttctgcgtc gtcgtgccat tctcgcgaat ggggatcgtg ctcccctgct ccgtgccgaa
     2521 gcccaccgtg acgaggctga cgttgttctc cgccgcccgc ttcgccgccg ccaccacgtc
     2581 gtcctggagc tcgaagccct cgccgtcggt catcacgacg agcgcgcggt cggcgccgct
     2641 cttggtcagc gcgagcagat tcgtccccgg cgtgatggtc gaggcgatgg agctgcccgc
     2701 ctgccccacg acgctcgggt cgaggttgtc gaggaagaga tcgagcgcgc cgccatccac
     2761 cgtgatcggc gagaggacgt agctcttgcc ggcgaaagcg agcagcccga cgcgatcgcc
     2821 cgggctcatc gcgcggaggc gccggatctc ctgcttcacc cgttcgagcc gcgacggctt
     2881 ctcgtccgtg gccatcatgg agagcgacgc gtccacggcg aacacgaggt cgacgccggt
     2941 ggagcgcacc gtcgtgcgct cgtagcccca ccgggggccg gcgatcgcga ggccggccag
     3001 cgcggcggcg agcgcgatgc gcacggcccg ccaccggccg ccgctgaacg ccaccgcggg
     3061 caccagacgg cgcacgacgt cgagcgcccc cagccgcgcg agacggcgct ggcgctgcac
     3121 gcggttgcgg cgcagcagcc agacgaagag caccggc
//
LOCUS       DASSYW010000570         2634 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1739691, whole genome shotgun sequence.
ACCESSION   DASSYW010000570 DASSYW010000000
VERSION     DASSYW010000570.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2634)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2634)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2634
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1739691"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2322
                     /locus_tag="VFN38_09075"
     CDS             <1..2322
                     /locus_tag="VFN38_09075"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HET9011955.1"
                     /translation="GATTAVFSVVRGVLLRPLPYRAPDRLVLFRADGPGVSRQALVTG
                     HELAAIKSRGDLFESIGVINESGGNLTEPDQMEAVTAASPSDNFLETLGLKPFLGRMV
                     SRQDIGPQWVTAVDISYELWQRRWQGDPTIVGKPIEINNIPMTIAGVLPPRFMLELGP
                     NVPISRRLDIWFPRGPGYDEGPTRSQTVIARLRGGVSLQTAQAEVNRSIAGVVAAHGA
                     DYRAGGVHLSMSSLEHEVGSDVRPALLALTGAVAFVLLVACANLMNLLLARACARTRE
                     LAIRAAIGASRRRLVAQLAAEGLLLGVVGAALGLIVAEWSVDGLLRLAPATLPRRDAI
                     AIDGVVAAFAVGTSLLCSLLFGLVPAWHATKIGVVDMIKQDPAQARHAGTTRGLLVAA
                     QLALSLMLLVGAGLMARAFVSMRSQPLGFDPSRALTMQIALQVQRFNAGSLEEAKQKR
                     LAFYHALADSTRQIPGVEQVGIGLFVPMSDGPMTMQFSLGPDQPARPAVGAIALAGFL
                     EALRVPLLAGRYFTPEDDNRLVAIVDRQLADEVWPRESALGRRMLLLRTTGEPTPVDI
                     VGVVNHVQLDGLRARSLPEIFVTYATRQYTGLNIVVRGANPMALAPAVEAAVQRLGPG
                     RPVHDIRLLEDYVADASADTRFALFVLGVFAVLATVLTAIGVYGVAAYATARRTREIA
                     VRLALGADRRRIVGLVVREGWLWTAGGLAAGVAGALLLSQYLRALLFAVGERDPLTFV
                     GVAAVLGAVALLATVVPAINALRVDPMLALRSE"
     gene            2357..2432
                     /locus_tag="VFN38_09080"
     tRNA            2357..2432
                     /locus_tag="VFN38_09080"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2390..2392,aa:Phe,seq:gaa)
BASE COUNT          361 a          893 c          906 g          474 t
ORIGIN      
        1 ggcgcgacca ccgcagtatt ctcagtggtg cgaggcgtcc tgctccgccc gctgccctat
       61 cgggcgcccg atcgcctcgt cctctttcgc gccgacggtc ccggcgtctc gcggcaggcg
      121 ctggtcaccg ggcacgagct cgcggcgatc aaatcgcgtg gcgatctctt cgaatccatc
      181 ggcgtcatca acgaatcggg cggcaacctc acggaacccg accagatgga agcggtgacc
      241 gccgcgtcgc cgagcgacaa ctttctcgag accctgggtc tgaagccgtt cctcggccgc
      301 atggtgtcgc gccaggacat cggcccgcag tgggtcaccg ctgtcgacat cagctacgag
      361 ctctggcagc ggcggtggca gggcgacccg acgatcgtcg gcaaaccgat cgagatcaac
      421 aacatcccga tgactatcgc gggcgtgctg ccgccgcggt tcatgctcga acttggaccg
      481 aacgtgccga tctcgcggcg gctcgacatc tggtttccgc gcggtcccgg atacgacgag
      541 ggaccgacgc gcagccagac tgtcatcgcg cggctgcgtg gcggcgtcag cctgcagacg
      601 gcgcaagccg aggtcaaccg ttcgatcgcc ggggtcgtcg ccgcccatgg cgcggactac
      661 cgcgccggcg gcgtgcacct ctcgatgtcg tcgctcgaac atgaagtcgg cagcgatgtg
      721 aggccggcgc tgctcgcgtt gaccggcgcg gtcgcgttcg tgctgctggt ggcgtgcgcc
      781 aatctgatga acctgctcct ggcgcgggcc tgcgcccgga cgcgagagct cgccattcgc
      841 gccgccatcg gcgcttcgcg ccgccggctc gtggcgcagc tcgccgcgga gggtctgctg
      901 ctcggcgtcg ttggcgccgc cctcggcctg atcgtcgcgg aatggagcgt cgatggtctg
      961 ctccggctcg caccggcgac gctgccgcgc cgcgacgcaa ttgccatcga cggtgtcgtc
     1021 gccgcgttcg ccgtcggcac gtcactgctc tgctcgctgc tcttcggcct cgtgcccgcg
     1081 tggcacgcga cgaagatcgg cgtcgtcgac atgatcaagc aggatcccgc gcaagcgcga
     1141 cacgcaggca cgacgcgcgg cctgctggtg gcggcgcagc tcgcgttgtc gttgatgctg
     1201 ctcgtcggcg cgggtctgat ggcgcgcgcg ttcgtcagca tgcgatcgca gccgctcggc
     1261 ttcgatccga gtcgggcgct gaccatgcag atcgcgctcc aagtgcagcg gttcaacgcc
     1321 ggatcgctgg aagaagcgaa gcagaaacgg ctcgcgttct accacgcgct cgcggattcg
     1381 acgcgccaga ttccaggcgt cgagcaggtc ggcatcggct tgttcgtgcc gatgagcgac
     1441 gggccgatga cgatgcagtt ttcgctcggt ccggatcagc cggcgcgccc ggcggtcggg
     1501 gctattgccc tggccggatt tctcgaggcg ctgcgcgtac cgctcctcgc cggccgctac
     1561 ttcacgccgg aggatgacaa tcgtctggtc gcgatcgtcg accgtcagct tgctgacgaa
     1621 gtctggccgc gggagtcggc gctcgggcga cgcatgctgc tcctgcgcac caccggtgag
     1681 ccgacgccgg tcgacatcgt gggcgtggtc aaccacgtgc agctcgatgg cttgcgtgcg
     1741 cgcagcctgc cggagatctt cgtgacttac gcgacgcggc aatacaccgg tctgaacatc
     1801 gtcgtgcgcg gcgcgaatcc gatggcgctt gcgccagcgg tggaggccgc ggtccagcgg
     1861 ctcgggccgg gtcggccggt gcacgacatt cgtctgctcg aggattacgt cgccgacgcg
     1921 tcggccgata cgcggttcgc gctgttcgtc ctcggcgtct tcgcagtgct ggcgacggtg
     1981 ctcaccgcga ttggcgtcta cggcgtcgcc gcctacgcga ccgcgcggcg cacgcgtgag
     2041 atcgccgtgc gcctggcgct cggcgcggat cggcgccgca tcgtcgggct ggtggtgcgc
     2101 gagggctggc tgtggaccgc cggcggcttg gcagccggcg tcgccggcgc gctcctgttg
     2161 tcgcagtacc tgcgagcgct gctcttcgcg gtcggcgaac gcgatccgct cacctttgtc
     2221 ggtgtcgccg cggtcctcgg cgcggtggcg ctcctggcga cggtcgttcc ggcgatcaac
     2281 gccctccgcg tcgacccgat gcttgctcta cgatctgagt gaacagtaca attggtggtt
     2341 cgagatggcc gccgtgggcg aggtagctca gttggtagag catacgactg aaaatcgtag
     2401 tgtcgacagt tcgattctgt ccctcgccac caccaactcg cgatcacggt gaaagttacc
     2461 cgcctcgcct tggtgaaggc ggctctcctg cccaggtgtt tatcccgcag attctccgag
     2521 ccgccacgtt gagagagcca tatcgacgcg gagatcgaca ggatctcgcc gaaggtcgcg
     2581 tttttccgcg ggagttcgct cgcgacggag caccagcccg ctcagctggc gttg
//
LOCUS       DASSYW010000571         2009 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1836129, whole genome shotgun sequence.
ACCESSION   DASSYW010000571 DASSYW010000000
VERSION     DASSYW010000571.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2009)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2009)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2009
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1836129"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..898
                     /locus_tag="VFN38_09085"
     CDS             <1..898
                     /locus_tag="VFN38_09085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="GMC oxidoreductase"
                     /protein_id="HET9011956.1"
                     /translation="AYIDTTTGRENHVRGRIVVVAASACESARILLNSKSSKFPQGLA
                     NSSGVVGRYLTDSTGANGGGYIPAMANSVPHNEDGANGAHLFMPWWGDNKKLDFPRGY
                     HIEVWGGLGAPGYGFMGGIQNYPGGGGYGKSLKDDYRKYYGATIGFSGRGEMIPNADT
                     YVELDPTVVDQWGIPVARFHWKFTDGEYNQVKHMQETFRALIAEMGGQVFSPMPGKEQ
                     NYGIAAGGQISHELGCVQMGANEKTSVLNSNCQAHDCRNLFVADGGPFVTQADKNPTW
                     TILALAWRTADYIAQQRKAGAL"
     gene            895..1542
                     /locus_tag="VFN38_09090"
     CDS             895..1542
                     /locus_tag="VFN38_09090"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025004.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate 2-dehydrogenase subunit 3 family
                     protein"
                     /protein_id="HET9011957.1"
                     /translation="MSDVSRRDALKLMGAVPLVGALDWSAPAIERATRMVQRLHEEGE
                     AAAYAPKFFNAHEWRTVRVLADMIIPKDERSGSATDARAPEFIDFMLMDAETGESSRV
                     SMRGGLAWLDNEMQHRFGKDFLSASDAQRRAVLDDIAYPRKAKPEYSAGVNWFNRFRS
                     NVGSAFFSSAMGWQDLRYMGNVFNPNWNGCPPEATRKLGVSYEEFDASLARSRKA"
     gene            1539..>2009
                     /locus_tag="VFN38_09095"
     CDS             1539..>2009
                     /locus_tag="VFN38_09095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HET9011958.1"
                     /translation="MTARRLGVGFVGSGFNARFHMLGWKGVRDADVLGVWSPNTKNAT
                     SAARYANELDVGRAGVYGSIAEMVADPAIDAIWLTGPNQARIENVQEICDAVVRGKGE
                     LKGIACEKPLARNVAEANEVVRLVKSAGLMHGYLEDQVFAPQVEAGRDLLWARGA"
BASE COUNT          362 a          663 c          696 g          288 t
ORIGIN      
        1 ggcctacatc gacaccacga caggccgcga aaatcacgtg cgcggccgca tcgtcgtggt
       61 ggccgcgagc gcctgcgaat cggcgcgcat cctgctcaac tcgaagtcgt cgaagtttcc
      121 gcagggcctc gcgaattcga gcggcgtcgt gggccggtac ctcaccgatt cgaccggcgc
      181 caacggcggc ggatacattc ccgcgatggc gaacagcgtg ccgcacaacg aagacggcgc
      241 caacggcgcg catctcttca tgccgtggtg gggcgacaac aagaagctcg atttcccgcg
      301 cggctatcac atcgaggtct ggggcggact tggcgcaccc ggttacggct tcatgggcgg
      361 catccagaac tatccgggcg gcggtggcta cggcaaatcg ctcaaggacg actaccgcaa
      421 gtactacggt gccacgatcg gcttcagcgg ccgcggcgag atgatcccca acgccgacac
      481 ctacgtggag ctcgatccca ccgtcgtgga ccagtggggc attcccgtgg cgcgcttcca
      541 ctggaagttc accgacggcg agtacaacca ggtgaagcac atgcaggaga ccttccgcgc
      601 gctgatcgcc gagatgggcg ggcaggtgtt cagcccgatg ccggggaagg agcagaacta
      661 cggcatcgcc gccggcgggc agatcagcca cgagctgggc tgcgtgcaga tgggcgccaa
      721 cgagaagacg tcggtgctga actcgaactg ccaggcgcac gactgcagga acctcttcgt
      781 cgccgacggc ggcccgttcg tcacgcaggc ggacaagaat cccacgtgga cgatcctcgc
      841 cctcgcgtgg cggacggcgg actacatcgc gcagcagcgc aaggcggggg ccctatgagc
      901 gacgtctcga gacgcgatgc gctgaagctg atgggcgccg tgcccctcgt cggggcactc
      961 gactggagcg cgccggccat cgagcgcgcg acgcggatgg tgcagcggct gcacgaggag
     1021 ggcgaagccg ccgcctacgc accgaagttc ttcaacgcgc acgagtggcg cacggtgcgc
     1081 gtgctcgccg acatgatcat cccgaaggac gagcgctccg gcagcgcgac cgacgccagg
     1141 gcgcccgagt tcatcgactt catgctgatg gacgcggaga cgggcgagtc gtcgcgcgtg
     1201 tcgatgcgcg gcggcctcgc gtggctcgac aacgagatgc agcaccgttt cggcaaggac
     1261 ttcctgagtg cgtccgacgc ccagcgtcgt gccgtgctcg acgacatcgc ctacccacgg
     1321 aaagcgaagc cggaatattc ggccggcgtg aactggttca accgcttccg ctccaacgtc
     1381 ggctcggcct tcttctccag cgccatgggt tggcaggatc tccgctacat gggcaacgtg
     1441 ttcaacccga actggaacgg ctgtcccccc gaggccacgc gcaagctcgg cgtgagctac
     1501 gaggagttcg acgcctccct cgcccgcagc cgcaaggcat gacggcacgg cgactcggcg
     1561 tcggcttcgt cggcagcggg ttcaacgccc ggttccacat gctgggctgg aagggagtgc
     1621 gcgacgccga cgtgctcggt gtgtggagtc ccaacacgaa gaacgccacc tcggcggcgc
     1681 gctacgccaa cgagctcgac gtcggccgcg ccggcgtgta cggctccatc gccgagatgg
     1741 tcgccgatcc ggcgatcgac gcgatctggc tcaccgggcc caatcaggcg cggatcgaga
     1801 acgtgcagga gatctgcgac gccgtcgtgc gcggcaaggg cgagctcaag gggatcgcct
     1861 gcgagaagcc gctcgcccgc aacgtggccg aagcaaacga ggtggtgcgg ctcgtgaagt
     1921 cggcggggct gatgcacgga tacctcgagg accaggtgtt cgcgccgcag gtggaggcgg
     1981 ggcgcgacct cctctgggcg cgcggcgcg
//
LOCUS       DASSYW010000572         3009 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_895852, whole genome shotgun sequence.
ACCESSION   DASSYW010000572 DASSYW010000000
VERSION     DASSYW010000572.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3009)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3009)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3009
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_895852"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(25..273)
                     /locus_tag="VFN38_09100"
     CDS             complement(25..273)
                     /locus_tag="VFN38_09100"
                     /inference="COORDINATES: protein motif:HMM:NF014087.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhbY family RNA-binding protein"
                     /protein_id="HET9011959.1"
                     /translation="MHVGHQGLTDTLFQTLDDALRTRELVKVALAKTTDVTAKDAAHQ
                     LAERMGADVVQTIGRTCTLFRENPDLKRKTGSPPPWRA"
     gene            complement(308..847)
                     /locus_tag="VFN38_09105"
     CDS             complement(308..847)
                     /locus_tag="VFN38_09105"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HET9011960.1"
                     /translation="MVLAGAPTLGRSAVSGDEAVSYLLTRELEIPVAGKTARQLQDTF
                     DEGRDGGRVHRALDILAPRGTAVLAADSGRVLRVKTNALGGNTIYTTDPQGRIVYYYA
                     HLDAYHEGLVEGLVIARGDTLGFVGTTGNAPRDTPHLHFQVMRMPPDGKYWDGEAINP
                     YPLFLLDAARNDSLVQGTR"
     gene            825..1004
                     /locus_tag="VFN38_09110"
     CDS             825..1004
                     /locus_tag="VFN38_09110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011961.1"
                     /translation="MGAPASTTRGADPADPRAGEDDEEEEGEGARAGDGYGAASWREQ
                     AVQAIAARSVKDLRM"
     gene            complement(1044..1955)
                     /locus_tag="VFN38_09115"
     CDS             complement(1044..1955)
                     /locus_tag="VFN38_09115"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone oxidoreductase"
                     /protein_id="HET9011962.1"
                     /translation="MSDPTPAAGEVIVRLEAVGVNFIDVYFREGLYRSALPFTPGSEG
                     AGIVVAVGSGVRDLTVGDRVASQGFVGAYAELARVRADRVVVLPEGMSTRDGAAAMLQ
                     GMTAHYLAASTHTLQAGDCCLVHAAAGGVGLLLCQIARRHGAFVIGTVSTEEKAALAR
                     AAGANETILYTKQDFVAEVKRITGGVGVQVVYDSVGATTFLKGLDCLAPRGLMVLFGQ
                     SSGPVDPIDPQLLNQRGSLFLTRPTLAHYVATPAELRWRAGEVLGWVHDGSLRLRIDR
                     ELPLARAAEAHRALEARATTGKVLLRP"
     gene            complement(2009..2443)
                     /locus_tag="VFN38_09120"
     CDS             complement(2009..2443)
                     /locus_tag="VFN38_09120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011963.1"
                     /translation="MTLTLSALHTAGAQNGAGLTITPGTEVRLTPRAPDAPRLRGRVV
                     VLERDTIVLRDGDSMSRAALGDLAALEVRGGEDKRRGFLIGAGIAGGITAVFGGIDAS
                     KGQISNDDLIGTLILNTLIGGLVGYAFAPKGWERIPLPSPAR"
     gene            complement(2476..2976)
                     /locus_tag="VFN38_09125"
     CDS             complement(2476..2976)
                     /locus_tag="VFN38_09125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011964.1"
                     /translation="MPSSSRSTRRGVAALLIALACAFTLAPRLHAQSDRLYVPVGTRV
                     RVVADSGERPFTGSVLRLTSDTLDVATGGGSVLTRLPTSRLTSIEVSEGRGRLKWGVA
                     GAGIGGLAGGMLGGAAGGRDDPTGLGAMAGFVAGGIMGVGLGAVVGAIVAPERWRRLS
                     LSGLVR"
BASE COUNT          434 a         1087 c         1080 g          408 t
ORIGIN      
        1 ctcacgaccc gcgattctcc ccgctcacgc tctccacggc ggaggcgatc cggtctttcg
       61 cttcaggtcc gggttctccc ggaacagcgt gcaggtccgg ccgatcgtct gcaccacgtc
      121 ggcccccatc cgttcggcca gctggtgggc ggcgtccttc gccgtcacgt cggtggtctt
      181 cgccagggcc accttcacca gctcgcgcgt gcgcagcgca tcgtcgagcg tctggaacag
      241 ggtgtcggtg aggccctgat ggcccacgtg caccagtggc gtcaggtggt gcgcttccgc
      301 gcgcagctca gcgcgttcct tggacgagag agtcattgcg tgcggcgtcg agaagaaaga
      361 gcgggtacgg gttgatcgcc tcgccgtccc agtacttccc gtcgggcggc atgcgcatga
      421 cctggaaatg caggtgcggg gtgtccctgg gcgcgtttcc cgtggtgccg acgaagccca
      481 gcgtatcgcc gcgcgcgatg acgagcccct cgaccagccc ctcgtggtac gcgtccagat
      541 gcgcatagta atacacgatc cgtccctgcg ggtcggtcgt gtagatggtg ttgccgccca
      601 gcgcgttggt cttgacgcgc aggacgcggc cgctgtcggc cgcgagcacg gccgtgccgc
      661 gtggcgccag gatgtcgagc gcccggtgca cgcggccgcc gtcgcgcccc tcgtcgaagg
      721 tgtcctggag ctgtcgcgcg gtctttccgg ccacgggaat ctccagctcg cgggtgagca
      781 ggtagctcac cgcctcgtca cccgacaccg ccgaccggcc gagcgtgggc gccccggcga
      841 gcaccacgcg cggcgccgac cccgcggatc cgcgcgcggg cgaggacgac gaagaggagg
      901 agggtgaggg agcgcgcgcc ggtgacgggt acggcgcggc gagctggcgc gagcaggccg
      961 tgcaggcgat cgcggcgagg agcgtgaagg atctgcgcat gtagactgac gagggtcgcg
     1021 cggcggcgtc acgcgcacga cgttcaggga cggagcagca ccttgcccgt ggtcgcgcgc
     1081 gcctccaggg cgcggtgcgc ctccgccgcg cgggcgagcg ggagctcgcg atcgatccgc
     1141 aaccgaagtg agccgtcgtg gacccagccg agcacctcgc cggcacgcca gcgcagctcg
     1201 gcgggggtgg ccacgtagtg cgcgagggtg ggccgggtga ggaagaggga gccgcgctgg
     1261 ttgaggagct gggggtcgat ggggtccacc ggcccgctgc tctgcccgaa cagcaccatc
     1321 agcccccgcg gcgcgagaca gtcgagcccc ttgaggaagg tcgtcgcccc caccgagtcg
     1381 tacaccacct gcacgcccac gccgccggtg atccgcttga cctcggccac gaagtcctgc
     1441 ttcgtgtaca ggatggtctc gtttgcgccc gccgcacgag cgagcgctgc cttctcctcg
     1501 gtggagacgg tgccgatgac gaaggcgccg tgacgtcggg cgatctggca gaggagcagc
     1561 cccactccac ccgccgccgc gtgcacgagg caacagtccc ccgcctggag ggtgtgggtg
     1621 gaggcggcga ggtagtgcgc cgtcatcccc tggagcatcg cggccgcgcc gtcgcgcgtg
     1681 ctcatcccct ccggcagcac gacgacgcgg tcggcgcgca cgcgggccag ctcggcgtac
     1741 gcgccgacga atccctgcga cgcgacacgg tcgcccacgg tcaggtcccg cacgccactg
     1801 ccgacggcga cgacgatgcc ggccccctcg ctgcccggcg tgaaggggag cgcgctcctg
     1861 tacagccctt cgcgaaagta cacgtcgatg aagttcacgc cgacggcttc gagccggacg
     1921 atgacctcgc ccgccgcggg cgttgggtcg gacacggtct cgagcctcag cacttcggga
     1981 ccaccatgct cgtggaccct gaccgccttc atcgcgccgg actgggcaac gggatgcgct
     2041 cccatccctt cggcgcaaac gcgtagccga ccaggccacc gatcagcgtg ttcaggatga
     2101 gcgtgccgat gagatcgtcg ttgctgatct ggcccttgct cgcgtcgatg ccgccgaaga
     2161 ccgcggtgat gccgccggcg atcccagcgc cgatgaggaa tccgcgccgc ttgtcctcgc
     2221 caccgcgcac ctccagcgcg gcgaggtcgc cgagggcggc gcgcgacatc gagtcgccgt
     2281 cgcgcagcac gatggtgtcg cgctcgagca cgacgacgcg gccgcgcagg cgcggggcat
     2341 caggagcccg cggcgtgagc cgcacctccg tccccggcgt gatggtcagc cccgccccgt
     2401 tctgtgcgcc ggcggtgtgc agggccgaca gcgtgagcgt cacgaccgcg agcgcgcggc
     2461 cacgagcagc acggctcatc gcacgagccc ggagagcgac agcctccgcc accgctccgg
     2521 cgccacgatc gcgccgacga cggcaccgag gcccactccc atgatgccgc ccgcgacgaa
     2581 gccggccatg gcgccgagac cggtgggatc gtcgcggccg ccggccgctc cccccagcat
     2641 gccgcccgcc agccccccga tgcccgcgcc agccactccc catttcagtc gtccgcgccc
     2701 ttcgctcacc tcgatggacg tcagccgcga cgtcgggagc cgcgtgagca cgctgccacc
     2761 gccggtggcg acgtcgagcg tgtcggaagt gaggcgcagc acgctgcccg tgaagggccg
     2821 ttcgccggag tcggcgacga cgcgcacgcg cgtgccgacg ggcacgtaca gcctgtcgct
     2881 ctgggcgtgc aggcgcggcg cgagcgtgaa ggcacaggcg agcgcgatca gcagcgcggc
     2941 gacgccgcgc cgagtggagc gggaggatga gggcatgcca taagatgcac ctgatactcg
     3001 gcggcgcca
//
LOCUS       DASSYW010000573         4066 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1096888, whole genome shotgun sequence.
ACCESSION   DASSYW010000573 DASSYW010000000
VERSION     DASSYW010000573.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4066)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4066)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4066
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1096888"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..618)
                     /locus_tag="VFN38_09130"
     CDS             complement(<1..618)
                     /locus_tag="VFN38_09130"
                     /inference="COORDINATES: protein motif:HMM:NF015094.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AarF/UbiB family protein"
                     /protein_id="HET9011965.1"
                     /translation="MRLVVILYRLLPLAIAFRRDFRRWFFFGDPAHRTDADHERRARR
                     LVAVLAELGPTFVKMAQLFAGRADLLAPVYARALTTLTDQVPMVPVAEVERIIVEEYG
                     APADELFERFDREPLAAASLGQVHRARYDGEEVVVKVLRPGVEALVAADVRASLRIVA
                     VVERWWPNPHVIGTRVVIEEFARRVAEEMDFRCEAAHAVAVRANFA"
     gene            638..1831
                     /locus_tag="VFN38_09135"
     CDS             638..1831
                     /locus_tag="VFN38_09135"
                     /inference="COORDINATES: protein motif:HMM:NF015411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4286 family protein"
                     /protein_id="HET9011966.1"
                     /translation="MPSTPLPRVALLGLGRMGHPMAARLLAAGLPLTVWNRGAARGAD
                     LVTQGARRARTPADAAYDADVVITMLADPAALEQVLSPPDGVLKTLKRGALFIDCSTV
                     GPTAARTAAEQCATRNASYVDAPVLGSVPAAEQGTLTIFAGGAADNVERARVVLSHLG
                     KEIIHVGDVGAASSLKLVMNLLVAGQTELMAEAFLLAERAGLSREIVTRALAGSVLSS
                     TFVGYKAPQLLERKFTPLFTTALLLKDVDLALELARSHALELPGVRATREAYGTAAVG
                     GRRDDDFSSVIASLERPRAEGEEPVLYEVTARVDDALAYDYERFMIETHIPDVVRTGC
                     FLRARLDQGGEGQYRAAYLAASQADVDRYLADFAPRLREHMNARFPTGVTLSRRVWTE
                     RMQWP"
     gene            complement(1839..2969)
                     /locus_tag="VFN38_09140"
     CDS             complement(1839..2969)
                     /locus_tag="VFN38_09140"
                     /inference="COORDINATES: protein motif:HMM:NF037131.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011967.1"
                     /translation="MSSTLPTDITDPVNARILAVSEDRIAGFLDDPFTEIARESGVPL
                     AVVLERLRGMLESGVIRRIRQTLMATNLAPGALVAWRVPTERLDEAFDFLAQRDPFSG
                     HVVIRSTDAETQGSVYRLWTTLKVPQGFSMQRHCELLASRIGADAFRIMPAKRLFALG
                     VGHVRRRGMEPGSRTDEPGQVIDTNIVELSDLEWRVLGPLKREFRPDELHPEPWRARA
                     GEAEVPYETFLAVARGLAERGVIGRFSTFLEHVKPSATGARVTRYNALFHWRVPAGRE
                     IEAGREVGRHHILTHAYWREGGPEFANVNIMAVAHGTEKAAVLLHKDAIDRHLVAADI
                     PVSYTNVFWGGRSEIKPSEIMPQAYEAWLREVGVDPDAMRDR"
     gene            complement(3081..3359)
                     /locus_tag="VFN38_09145"
     CDS             complement(3081..3359)
                     /locus_tag="VFN38_09145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011968.1"
                     /translation="MFFILSILVSFAVSMLAYAQARNFVTRRLRYVDAVQTALAPFIA
                     GIASAVVLWPIVALLPLVGVGTAISVGFAVGAGVAAGAREVRHSLPRY"
     gene            3487..3801
                     /locus_tag="VFN38_09150"
     CDS             3487..3801
                     /locus_tag="VFN38_09150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011969.1"
                     /translation="MITLRVTRHDRNELLLADCQSAVIPARGEVLQLDTVEADGSMSR
                     PSTLWRVVAVTVHVPSLHSSAPLDGSPLRVRTVEVSVLPDVSLLPALHHAEAKVLSES
                     RM"
     gene            3859..>4066
                     /locus_tag="VFN38_09155"
     CDS             3859..>4066
                     /locus_tag="VFN38_09155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011970.1"
                     /translation="MTRSSLSTSPDAIHDRPLRASGELQRVSNVLPEHLAAWQLPPQW
                     QWGAEGIWEDHRHFQELIDALGRSL"
BASE COUNT          592 a         1442 c         1436 g          596 t
ORIGIN      
        1 ggcgaagttg gcgcgcacgg cgaccgcgtg cgcggcctcg cagcggaagt ccatctcctc
       61 ggcgacacgc cgggcgaact cctcgatcac gacgcgcgtg ccgatgacgt gcgggttggg
      121 ccaccaccgc tcgacgacgg cgacgatgcg gagggacgcc cggacgtcgg ccgccacgag
      181 cgcctccacg ccggggcgga gcaccttgac gaccacttcc tcgccgtcgt agcgggcccg
      241 gtgcacctgc ccgagcgacg cggcggccag cggctcgcga tcgaaccgct cgaagagctc
      301 gtcggcgggg gcgccatact cctcgacgat gatgcgctcc acctccgcga ccggcaccat
      361 cggcacctga tcggtcagcg tcgtgagcgc gcgagcgtac acgggcgcga gcaggtcggc
      421 gcgccccgcg aagagctgcg ccatcttcac gaacgtcggg ccgagctccg ccagcacggc
      481 cacgaggcgc cgggcgcgcc gctcgtggtc cgcgtcggtc cggtgggccg gatcgccgaa
      541 gaagaaccac ctccggaagt cgcgccggaa cgcgatggcc agcggcagca gccggtaaag
      601 gatgacgacg aggcgcattt ctcgtttatt accccgcatg ccttccactc cgctccctcg
      661 cgtcgccctg ctcggcctcg gccggatggg ccatcccatg gccgcccgcc tgctggcggc
      721 cggcctgccg ctcaccgtct ggaaccgcgg cgccgcgcgc ggtgccgatc tcgtcacgca
      781 gggcgcacgc cgcgcccgga ctccggccga cgccgcctac gatgcggacg tcgtcatcac
      841 gatgctcgcc gacccggcgg cgctggagca ggtgctctcg ccgcccgacg gcgtgctgaa
      901 gacgctgaag cgcggcgcgc tgttcatcga ttgctccacc gtcggcccca ccgcggcgcg
      961 cacggcggcc gagcagtgcg ccacgcggaa tgcgtcgtac gtggacgcgc ccgtgctggg
     1021 tagcgtcccc gccgccgaac agggaaccct caccatcttc gccggcggcg cggccgacaa
     1081 cgtggagcgc gcgcgcgtcg tgctgtccca tctcggcaag gagatcatcc acgtcggcga
     1141 cgtcggcgcc gcgagcagcc tgaagctggt gatgaacctg ctggtcgccg ggcagacgga
     1201 gctgatggcc gaagcgttcc tgctcgccga gcgcgccggg ctgtcgcgcg agatcgtgac
     1261 ccgggctctc gccggatcgg tgctcagctc gacgttcgtg ggctacaagg cgccccagct
     1321 gctggagcgg aagttcacgc cgttgttcac gacggcgctc ctgctcaagg acgtcgacct
     1381 cgcgctcgag ctggcccgtt cgcacgcgct ggagctgccg ggggtgcgcg cgacgcgcga
     1441 ggcgtacggg accgcggcag tggggggacg gcgcgacgac gacttctcgt ccgtcatcgc
     1501 ctcgctcgag cggccgcgcg ccgagggaga ggagcccgtg ctgtacgagg tgacggcccg
     1561 cgtggacgac gcgctggcgt acgactacga gcgcttcatg atcgagacgc acattcccga
     1621 cgtcgtgcgc accggctgct tcctgcgcgc gcggctcgat cagggcggcg aggggcagta
     1681 tcgggcggcg tacctcgccg cctcgcaggc ggacgtcgac cgctatctcg ccgacttcgc
     1741 gccgcggctg cgcgaacaca tgaacgcgcg gttcccgacc ggcgtcacgc tctcgcggcg
     1801 tgtctggacc gagcggatgc agtggccgtg acgcgcggtc agcgatcgcg catcgcgtcg
     1861 gggtcgacgc ccacctcgcg gagccacgcc tcgtaggcct gcggcatgat ctcggacggc
     1921 ttgatctcgc tgcgtccgcc ccagaacacg ttggtgtagc tcacgggtat gtccgcggcg
     1981 acgaggtgcc ggtcgatcgc gtccttgtgc agcagcacgg cggccttctc ggtgccgtgc
     2041 gccacggcca tgatgttcac gttggcgaac tccggccccc cctcgcgcca gtaggcgtgc
     2101 gtgaggatgt ggtgccgccc gacctcgcgt cccgcctcga tctcgcggcc ggcgggcacg
     2161 cgccagtgga agagcgcgtt gtagcgcgtc acgcgtgccc ccgtggcgga tggcttcacg
     2221 tgctcgagga aggtggagaa gcggccgatc accccgcgct cggcgagtcc gcgcgccacg
     2281 gcgaggaagg tctcgtaggg aacctcggcc tcgccggctc gcgcacgcca cggctcgggg
     2341 tgcagctcgt cgggacggaa ctcgcgcttg agcgggccaa ggacgcgcca ctccaggtcg
     2401 gacagctcca cgatgttggt gtcgatcacc tggcccggct cgtccgtgcg gcttcccggc
     2461 tccatcccgc ggcgacgcac gtgtccgacg ccgagggcga acagccgctt ggcgggcatg
     2521 atgcgaaagg cgtcggcacc gatgcgcgac gcgagcagct cgcagtgccg ctgcatcgag
     2581 aagccctggg gcaccttgag ggtcgtccag agccgataga cggagccctg cgtctcggcg
     2641 tcggtgctgc ggatgacgac gtgccccgag aagggatcgc gctgcgcgag gaagtcgaac
     2701 gcctcgtcga gccgctcggt gggcacgcgc cacgccacca gcgcgcccgg cgcgaggttg
     2761 gtggccatga gggtctggcg gatgcgccgg atcacgccgc tctccagcat cccgcgcagg
     2821 cgttccagca ccaccgcgag cggcacgccg ctctcccgcg cgatctccgt gaacggatcg
     2881 tccaggaagc ccgcgatccg atcctcgctc acggcgagga tgcgcgcgtt gaccggatcg
     2941 gtgatgtcgg tggggagggt ggaggacatg gaggaaagat aacggatgcc cactggcccg
     3001 atggcccgaa acagaaaggg cacaccgatt acgttcggtg tgcctctctc gggcctccgg
     3061 gcgttcgcgc ctccgggcct tcagtacctc ggcagcgaat gcctcacttc gcgcgcaccg
     3121 gccgccacgc ccgcgccgac ggcgaacccg acgctgatgg cggtgccaac gccgaccagg
     3181 ggaaggagtg caacgatcgg ccacagcacg acggccgagg cgatgccggc gatgaatggg
     3241 gcgagcgcgg tctgcacggc gtcgacatag cgcaggcgtc gcgtcacgaa gttgcgcgcc
     3301 tgtgcgtacg cgagcatcga gaccgcgaac gacaccagaa tgctcaggat gaaaaacatg
     3361 gactcctcgt cgagtatggg tctggtgtgt cgtacgtcgt gcggtcgcac gagtttcatc
     3421 gcatgtctgg ctccgcgcga gcccgaccga tagcttcccg tcgacctctc ttcccgcagg
     3481 cgggccatga tcacgcttcg cgtcactcgt cacgatcgga acgagctgct gctcgcggac
     3541 tgccagagcg cggtcatccc ggcgcgcggc gaggttctgc agctcgatac ggtcgaggcc
     3601 gacggatcga tgagccggcc gagcactctg tggcgtgtcg tggcggtcac ggtgcacgtg
     3661 ccgtcgctcc actcgtcggc accgctcgac ggcagcccgc tgcgcgtgcg cacggtggag
     3721 gtgagcgtgc tgccggatgt ttcgctgctg ccggcgctgc atcacgcgga ggcgaaggtc
     3781 ctgtccgagt cacgcatgtg acggaagggt gaccctgccg acctgcctcc gaccgctgcg
     3841 gcccgctagc tttcgcgcgt gacccgctcc tccctgtcca cgtcgcccga cgcgatccac
     3901 gatcgcccgt tgcgtgcgtc gggcgagctg cagcgcgtca gcaacgtgct ccccgagcac
     3961 ctcgccgcct ggcagcttcc accgcaatgg cagtggggcg ccgaaggaat ctgggaggac
     4021 caccgtcact tccaggagct gatcgacgca ctggggcggt ccctct
//
LOCUS       DASSYW010000574         2030 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1477699, whole genome shotgun sequence.
ACCESSION   DASSYW010000574 DASSYW010000000
VERSION     DASSYW010000574.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2030)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2030)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2030
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1477699"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..670)
                     /locus_tag="VFN38_09160"
     CDS             complement(<1..670)
                     /locus_tag="VFN38_09160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011971.1"
                     /translation="MHPDVTALLAVQHDDLEIYELESRLVSLAPRLAAREKERGKVAG
                     ALERAQKTVDAEEARYREARGRIETHRQLMERSQRQYESVTSPREATAAMSQLEQTRR
                     MVEESERDAAQVQGRVNEMRHQVADLERQLAEVEGRQSEARASIDADRAAIERDIAEA
                     RRKRDQTARAVPRPVLSKYDRVRSRRRSETVFPLRGQSCSACDTAIPTQRRAAMAATG
                     ALEMC"
     gene            complement(763..>2030)
                     /locus_tag="VFN38_09165"
     CDS             complement(763..>2030)
                     /locus_tag="VFN38_09165"
                     /inference="COORDINATES: protein motif:HMM:NF024755.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="toprim domain-containing protein"
                     /protein_id="HET9011972.1"
                     /translation="FRGRLIFPIYDPAGHVVGFGGRLLGPGEPKYLNSPESPVFSKGK
                     LLYGLNWAKQAARRDERMLVVEGYFDAVRIIGAGVESVVAPMGTALTDDQAKLIRRYT
                     DRVYLLYDSDKAGLKATFRSGDELLRQGAAVQVVTLPEGEDPDSFVRANGARGLEAQL
                     ATSIDVFERKIQILERGGWFADLRKKRQALDRLLPTLRATSDPLTRDMYLGHASEAAG
                     VTRELLERELTAPARSRAGRPGRPAEAGVGEGHPAEPRGRPAPPPDITRVRRAERRRV
                     GGERTTAAERELTRVLLHRPAYLEQVIERVGAESFRDPDLRRIFAAMVEHGADAGFDV
                     LAAALSGDAVVVMQDLLEETGGLEHADEAVAGSLAAIHKGELARRMAEIDELMPLAAN
                     DEKDSLTQEKMQLVEELRSLGGGPWKQFR"
BASE COUNT          253 a          773 c          697 g          307 t
ORIGIN      
        1 cgcacatctc cagcgcgccg gtggcggcca tggcggcgcg gcgctgggtg gggatggccg
       61 tgtcgcacgc gctgcacgac tgtccgcgca gcgggaacac cgtctcgctg cggcggcgcg
      121 agcgcacccg gtcgtacttg gagaggaccg gccgcggcac ggcgcgggcc gtctggtcgc
      181 gcttgcggcg cgcctcggcg atgtcgcgct cgatcgcggc gcggtcggcg tcgatggagg
      241 cgcgcgcttc cgactggcgg ccctccacct cggccagctg ccgctccagg tcggcgacct
      301 gatggcgcat ctcgttcacc cgcccctgca cctgcgccgc gtcgcgctcg ctctcctcca
      361 ccatccgcct cgtctgctcc agctgcgaca tcgcggccgt cgcctcgcgg ggactcgtca
      421 cgctctcgta ctggcgctgg ctccgctcca tcagctgccg gtgcgtctcg atgcggccgc
      481 gcgcttcacg gtagcgggcc tcctcggcgt ccacggtctt ctgcgcccgc tccagggcgc
      541 cggccacctt gccccgctcc ttctcccgag cggcgagcct cggtgcgagc gacacgaggc
      601 gcgattcgag ctcgtagatc tccagatcgt cgtgctggac ggcgaggagc gcggtgacgt
      661 cgggatgcat ggcggggcga tgtgaacgtg tgaccgaaag accggaggac agagacgtcg
      721 caagggccgc tgctggatga taatactctc atgcaccctc ttctagcgaa actgcttcca
      781 gggaccgccg cccagtgagc gcagctcctc cacgagctgc atcttctcct gggtgagcga
      841 gtccttctcg tcgttcgccg ccagcggcat cagctcgtcg atctcggcca tgcgccgggc
      901 cagctcgccc ttgtggatgg ccgccaggct gccggccacc gcctcgtcgg cgtgctccag
      961 cccccccgtc tcctccagca ggtcctgcat cacgaccacc gcgtcgccgg acagcgccgc
     1021 ggcgaggacg tcgaagccgg cgtcggcgcc gtgctccacc atcgccgcga agatccggcg
     1081 caggtcgggg tcgcggaagc tctcggcgcc gacacgctcg atcacctgct cgaggtacgc
     1141 gggccggtgc agcagcaccc gcgtgagctc gcgctccgcg gcggtcgtgc gctccccgcc
     1201 cacgcggcgg cgctcggcgc ggcgcacccg cgtgatgtcc ggcggtggcg cggggcggcc
     1261 gcgcggctcc gccggatgcc cctcccccac gcctgcctcg gccggccggc ccgggcggcc
     1321 ggcgcgggac cgcgccggcg cggtgagctc gcgctccagc agctcgcgcg tcactccggc
     1381 cgcctcgctc gcgtgaccca ggtacatgtc acgcgtgagg ggatcgctgg tggcgcggag
     1441 cgtcgggagc agccggtcca gcgcctgacg cttcttgcgc aggtcggcga accagccgcc
     1501 acgctcgaga atctggatct tccgctcgaa cacgtcgatg gacgtcgcga gctgggcctc
     1561 cagcccccgc gcgccgttgg cacgcacgaa gctgtcggga tcctcgccct cgggcagggt
     1621 caccacctgc accgccgcgc cctgccggag cagctcgtcg cccgatcgga aggtggcctt
     1681 caaccccgcc ttgtccgaat cgtagagcag gtagacacga tcggtgtagc ggcggatgag
     1741 cttcgcctgg tcatccgtga gcgcggtgcc catcggggcc acgacgctct ccacgccggc
     1801 cccgatgatc cgcacggcgt cgaagtagcc ctccaccacg agcatgcgct cgtcgcgccg
     1861 ggcggcctgc ttcgcccagt tcaggccata gagcagcttc cccttgctga acaccggcga
     1921 ctcgggggag ttgaggtact tcggctcgcc cggcccgagg agccgtcccc cgaagcccac
     1981 cacgtggccg gccggatcgt agatcggaaa gatgagccgt ccgcggaagc
//
LOCUS       DASSYW010000575         2486 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_606514, whole genome shotgun sequence.
ACCESSION   DASSYW010000575 DASSYW010000000
VERSION     DASSYW010000575.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2486)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2486)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2486
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_606514"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            128..649
                     /locus_tag="VFN38_09170"
     CDS             128..649
                     /locus_tag="VFN38_09170"
                     /inference="COORDINATES: protein motif:HMM:NF019928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HET9011973.1"
                     /translation="MTNTAAPDIGTATQVYRVFIRATPQKIWDAITQPEWTQRFGYGL
                     REEYDLHPGGKYRGHATPEMRAMNFPETVTDGEVLESDPPRKLVVTWRMAMDPNMAKE
                     GFTRLTYEIMEGRDGVSRLSVIHDLTGTPGHAAMVAGDKQGPGEGGGWLWILSDLKSL
                     LENGAPMSTKKGW"
     gene            989..1657
                     /locus_tag="VFN38_09175"
     CDS             989..1657
                     /locus_tag="VFN38_09175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011974.1"
                     /translation="MTKHTTDSARRILAIGTLALLGSAGACKAKKAATPAAAAVAVDT
                     TPVAPEPEPVAVAPAPVVVAPVEEIRPRCDQFTIRDSGIGAIEIGDARDAIPKRCAVL
                     GDSIATDAADGNVVIGVNGVPVLVQVAENKVYRITLTDPQFRTEDGLGAGIPIAGMLE
                     LPGAVVLEGEHDLSVVVSAHCGLYFRITKPTTLPANAARWSDVVRAMPQGTPVERVVI
                     HGCR"
     gene            1812..>2486
                     /locus_tag="VFN38_09180"
     CDS             1812..>2486
                     /locus_tag="VFN38_09180"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HET9011975.1"
                     /translation="MRRHALILIALALPSLLAAQAPAVDAPRDGVMSAFESFSAIFGS
                     RLRTAFDSIPANRYDYRPTPPQQTIGYIAQHLEDANYALCERMGDLKHPRTAKDSLAD
                     TIKARWPKDTLVARLAASFRFCDAAMARIPTLSSGGQARTLLAFETDLAEHYAQLSGY
                     MRQLGMVPPSALPPKPRTAIDLPTSTLTPYVGVYRLDATQELEVTMRDGVLFVKSTGG
                     STVRLWA"
BASE COUNT          412 a          856 c          840 g          378 t
ORIGIN      
        1 gggagaagct gcactacctc aaccccgtgc ccatccggct catccacgat cgatggatcg
       61 acaagttcac cgagcgccgg gtgtcggcgc tcacggatct caagcgccaa ctggaggagg
      121 attccgcatg acgaacaccg ccgcgcccga catcggcacc gcgacgcagg tctaccgcgt
      181 cttcatcagg gccaccccgc agaagatctg ggacgcgatc acccagcccg aatggacgca
      241 gcgcttcggc tacgggctgc gcgaggagta tgacctgcat cccggcggca agtatcgcgg
      301 gcacgccacg cccgagatgc gcgccatgaa cttccccgag accgtcaccg acggcgaggt
      361 gctcgagtcc gatccgccgc gcaagctcgt cgtcacctgg cgcatggcga tggatccgaa
      421 catggcgaag gagggcttca cccgcctcac ctacgagatc atggaagggc gcgacggcgt
      481 gagccgcctg agcgtgatcc acgacctcac cggcacgccc ggtcacgcgg cgatggtcgc
      541 cggcgacaag cagggcccgg gcgagggcgg cggctggctg tggatcctca gcgacctcaa
      601 gtcgctgctg gagaacgggg cgccgatgtc gaccaagaaa ggctggtagc gtcccacccg
      661 cggcgcagct ggcccctcag tcgaaggtgg gacgcggatt gaacggatgg aacggaaagg
      721 gcaggatagt tcctcggtcg gcgtcgtcgc accaactcct tcaccggcga catcaaaggc
      781 atttgccttt gatgtcgcgg ggccggctct cggcgcgcgg agacccatgt gctcacggag
      841 cggatccggt ctttatccgt tccatccgtt cgatccgcgt tcacccttcg actgagtggc
      901 ccgttcaagg cgacgcaaaa tttgcctcca tcgcgccaac tcgtccttgc ttgtacgcca
      961 tcgaggcccg agaaaagcga gaatgaaggt gacgaagcac acaacggatt cggcgcgccg
     1021 aatcctggcg atcggcacgc tggccctgct gggatccgcg ggcgcctgca aggccaagaa
     1081 ggccgcgact ccggcggcgg ccgcggtcgc ggtggatacg acgcccgtcg cgcccgagcc
     1141 ggagccggtc gccgtggcgc cggcgcccgt cgtcgtcgcg ccggtggagg agatccggcc
     1201 gcggtgcgac cagttcacga tccgcgacag cggcatcggc gccatcgaga tcggcgacgc
     1261 ccgggacgcg atcccgaagc gatgcgccgt gctcggcgac agcatcgcga cggatgccgc
     1321 ggacgggaac gtcgtcatcg gcgtgaacgg cgtgccggtg ctggtgcagg tcgcggagaa
     1381 caaggtgtac cgcatcaccc tcaccgatcc gcagttccgc accgaggatg gcctcggcgc
     1441 ggggatcccc atcgcgggga tgctcgagct gccgggcgcc gtggtgctcg agggggaaca
     1501 cgatctctcg gtggtcgtga gcgcgcactg cgggctctac ttccggatca ccaagcccac
     1561 gacgctgccg gcgaacgccg cgcggtggtc ggacgtcgtg cgcgcgatgc cccagggcac
     1621 gccggtggag cgcgtggtga ttcacggctg ccgctgatcg cgctgtcgtc ctgagcgaag
     1681 cgaaggacct gcacgtgccg ttcgtcgctc cttgcgccgg gcgtcggtgg gggctccatt
     1741 ttcgctcgct ctcctcgcgt catggagccc ccgcctgcgc tccacgtgtc caccatgaga
     1801 tcgaatgttg catgcgccgt cacgccctga tcctgatcgc gctcgcgctt ccttcgttgc
     1861 tcgcggcaca ggcgccggcg gtcgacgcac cgcgggacgg cgtcatgtcg gccttcgaga
     1921 gcttcagcgc catcttcggc agccggcttc gaacggcgtt cgactcgatt cccgcgaacc
     1981 ggtacgacta ccggccgaca ccgccgcagc agacgatcgg ctacatcgcc caacacctcg
     2041 aggacgcgaa ctacgcgctc tgcgagcgga tgggagatct gaagcatccg cgcaccgcga
     2101 aggattcgct ggccgacacg atcaaggcgc ggtggcccaa ggacacgctc gtcgcgcggc
     2161 tcgccgcatc gttccgcttc tgcgacgcgg cgatggcgcg catcccgaca ttgagctccg
     2221 gtggacaggc gcgcacgttg ctggcgttcg agacggacct cgccgagcac tatgcacagc
     2281 tctcgggcta catgcggcag ctcgggatgg tcccgccgtc cgcgctgccg ccgaagccgc
     2341 gcacggcgat cgacctgccg acgtccacgc tcacgccgta cgtcggcgtc taccggctcg
     2401 acgcgacgca ggagctcgag gtcacgatgc gcgacggcgt gctgttcgtg aagtcgacgg
     2461 gaggatcgac ggtccggctc tgggcc
//
LOCUS       DASSYW010000576         3972 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_898426, whole genome shotgun sequence.
ACCESSION   DASSYW010000576 DASSYW010000000
VERSION     DASSYW010000576.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3972)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3972)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3972
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_898426"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            161..1291
                     /locus_tag="VFN38_09185"
     CDS             161..1291
                     /locus_tag="VFN38_09185"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HET9011976.1"
                     /translation="MRFLGLTAIACLLGLSLPLAQQPTGDTSQAKSRVDERLKALRQE
                     ADRLATQAKTLLGDVRKLEVQRDIRATEAQEAQRALDAAKDDLNDTTRRLELLEEQRL
                     RGLPDLKQQLVETYKRGRSGYLRLLLSAGDLRGFARATRAMTALTFRQERVIGDYHQT
                     VEALRAERTVLQGKTTALRTKDAAARRARGLAEKAVADRAALIDQIDSRRDLTAQYVG
                     ELQLARERLDQQITGIAGEHRAVAVPLAPFRGGLEWPVTGEVASRFGQPSGRQGAPLV
                     RSGMEIVAAEGTPVRAVHGGTVGYAEGYTGLGTLVILDHGGNNYSLYGYLLSLSVQRG
                     EVVEAGAEVGRVGPSPGGPPQLYFELRIDGRSVDPVQWLKPR"
     gene            1305..2492
                     /locus_tag="VFN38_09190"
     CDS             1305..2492
                     /locus_tag="VFN38_09190"
                     /inference="COORDINATES: protein motif:HMM:NF015531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HET9011977.1"
                     /translation="MTSRTRLWVLAVSTPLIAFAIIGGYLGRVLGAGKDDTFKQLPVF
                     EEVVSLVLNNYVEEVDVRQAMRGALKGLTDNLDPDSAYLTPDLMKAAESGQPAGPADV
                     GIVLTRQYYLRIVSVRDGSPAAKAGLRTGDFIRGINDKPTRDMSAFEGARLMTGSAGS
                     KVKLLMFRGNQAEPHDVVVTRERIAGPDLTSKMANATTGYVRVVDFTKETPAKVRQAF
                     ETLAKSGATKFVVDIRNTARGDIDDGIATARLFVPSGTLTVRQAKDQREEVKAAATDG
                     SLREPVALLVSQGTSGAAEVFAAALDGNDRAELVGEHTLGRAARQRLVKLPDGSGLLL
                     SNVRYLTPKNNAIHERGLAPDVEVDEPEVDFGAEPPAGDVTLDKAIDRLANPKPAETK
                     KAA"
     gene            2675..2947
                     /locus_tag="VFN38_09195"
     CDS             2675..2947
                     /locus_tag="VFN38_09195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015900354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HET9011978.1"
                     /translation="MNKQDLIGKIAKDTGSSKTAAAAAVDSLIDGITRSLKKGESITF
                     VGFGTFSTSQRKARTARNPQTGEAIKIAKRRVARFKAGKALKDAVR"
     gene            3061..3137
                     /locus_tag="VFN38_09200"
     tRNA            3061..3137
                     /locus_tag="VFN38_09200"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3095..3097,aa:Val,seq:gac)
     gene            3148..>3972
                     /locus_tag="VFN38_09205"
     CDS             3148..>3972
                     /locus_tag="VFN38_09205"
                     /inference="COORDINATES: protein motif:HMM:NF014839.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TGS domain-containing protein"
                     /protein_id="HET9011979.1"
                     /translation="MSQVTVTLPDGSSKAVSAGAPVRAVAEAISPRLAQAALAAVVDD
                     KLVDLTYPLAADAKVRIVTDKSPEALMLARHSTAHLMAAAVTNLFPAVQCGIGPPTDE
                     GFFYDFVVPRPFVPEDLEAIEAKMRELASQDFVYERQMWPRDEAKRFFGARGEPLKVQ
                     LIDEKTEGQSEVSVYTIKDKETFVDFCVGPHVPSTGKLKAFKLLTTSNAYWKGDAGNQ
                     PMQRLYGTAFLSEKELADHLKRIEEAKLRDHRKIGKDQKLFMFHQWAPGAPFWLPKG"
BASE COUNT          697 a         1368 c         1331 g          576 t
ORIGIN      
        1 cgcatcgagc ttcgcgatgg tcagcacgcc caccgggcgc gccagcgtgc gggtcgcatc
       61 gctgatggcc acaccgatgc gtcgttcgcc cacgtcgagt cctaccaccc gcaccctgac
      121 ccttatacta gcggcttcac ctcgggccga tagataggtc atgcgatttc tgggcctcac
      181 cgcgattgcg tgcctgcttg ggctctcgct gccgctcgcg cagcagccca ccggcgacac
      241 gtctcaggcg aagagccgcg tggacgagcg cctcaaggcg ctgcgccagg aagcggaccg
      301 cctggccacg caggccaaga cgctcctcgg cgacgtgcgc aagctcgagg tccagcgcga
      361 catccgggcc acggaggcgc aggaggcgca gcgcgcgctc gacgccgcca aggacgatct
      421 caacgacacg acgcgccggc tcgagctgct cgaagaacag cggctgcgcg gcctgcccga
      481 cctgaagcag cagctcgtcg aaacctacaa gcgcggacgc agcggctacc tgcggctact
      541 cctgtccgcg ggcgacctgc gcggcttcgc gcgcgccacg cgcgcgatga cggcgctcac
      601 cttccggcag gagcgcgtga tcggcgacta ccaccagacc gtggaggcgc tgcgcgcgga
      661 gcgcacggtc ctgcagggca agaccaccgc gctcagaacc aaggatgccg ccgcgcgccg
      721 cgcgcgtggg ctggccgaga aggcggtggc cgatcgcgcc gcgctcatcg accagatcga
      781 ttcgcgccgc gacctcacgg cacagtatgt gggcgagctc cagctcgcgc gcgagcggct
      841 ggatcagcag atcaccggca tcgccggaga acaccgggcc gtggccgtac cgctggcgcc
      901 gttccgcggc ggcctcgagt ggccggtcac gggcgaggtg gcgtcgcgct tcggccagcc
      961 gtcggggcgg caaggcgctc ccctggtccg cagcgggatg gagatcgtcg cggccgaggg
     1021 cacgcccgtc cgtgccgtcc acggcggaac cgtggggtat gccgagggct acaccgggct
     1081 cggcacgctg gtcatcctcg accacggcgg gaacaactac tcgctttacg gctacctcct
     1141 gtcgctgagc gtccaacggg gtgaggtggt ggaggccggt gcggaagtgg gacgggtggg
     1201 accctccccc ggcggaccgc ctcagctcta cttcgagctg cggatcgacg gccgttcggt
     1261 cgatcccgta caatggctga agccccgcta acgacaggat tttcatgacc tcacgcaccc
     1321 ggctctgggt tctcgcggtc tcgacgcccc tcatcgcctt cgccatcatc ggcggctatc
     1381 tcgggcgggt gctcggcgcc ggcaaggacg acaccttcaa acagctgccg gtcttcgaag
     1441 aggtcgtctc gctcgtcctc aacaactacg tcgaggaagt ggacgtgcgc caggccatgc
     1501 gtggcgccct caaggggttg accgacaacc tcgaccccga cagcgcgtat ctgacgccag
     1561 acctgatgaa ggcggccgaa agcggccagc ccgccggccc cgccgacgtg ggcatcgtcc
     1621 tcacgcggca gtattacctg cgcatcgtgt cggtgcgcga cggctcgccc gccgccaagg
     1681 ccggtctgcg cactggcgac ttcattcgcg gcatcaacga caagccgacg cgcgacatgt
     1741 cggcgttcga gggcgcgcgc ctgatgacgg gttccgccgg cagcaaggtg aagctgctga
     1801 tgttccgcgg caaccaggcc gagccgcacg acgtggtggt gacccgcgaa cgcatcgccg
     1861 gacccgacct gacgtcgaag atggccaacg cgacgaccgg ctacgtgcgc gtggtggact
     1921 tcaccaagga aacgccggcc aaggtgaggc aggcgttcga gacgctcgcc aagagcggcg
     1981 ccacgaagtt cgtggtggac atccgcaata ccgcgcgcgg cgacatcgac gacggcatcg
     2041 ccacggcgcg gctgttcgtc ccgtcgggca cgctgacggt gcggcaggcg aaggaccagc
     2101 gcgaagaggt gaaggccgcc gcgaccgacg gctcgctgcg cgagccggtg gcgctgctcg
     2161 tgagccaggg cacgtcgggt gcggccgaag tgtttgccgc ggcgctcgac ggcaacgacc
     2221 gcgcggagct cgtgggcgag cacacgctcg gccgcgccgc gcgccagcgt ctcgtgaagc
     2281 tgccggacgg cagcggcctc ctcctctcga acgtccgcta cctcacgccg aagaacaacg
     2341 cgatccacga gcgcggcctc gcgccggacg tcgaggtgga cgagcccgaa gtggacttcg
     2401 gcgccgagcc gcccgccggc gacgtgacgc tcgacaaggc gatcgatcgc ctcgcgaacc
     2461 ccaagccggc cgagacgaag aaggccgcct gatcgaatcc cgtggcaggc aggcaggtgg
     2521 ggagctaggc aggtaggagc tctccactgc gacgccctac ctgctcaccg gcccacctgc
     2581 ttaccctgcc tgacccgcgg ctctttcgtt gacagtgctg tgacgcgagc gtataaggcg
     2641 agcggtgcac ggttctgcac tcgaaggagc atgcatgaac aagcaagatc tgatcggcaa
     2701 gatcgccaag gacaccggct cgtcgaagac ggctgccgcg gcggcagtcg actccttgat
     2761 cgacggcatc acccgcagtc tgaagaaggg tgagtcgatc acgttcgtgg gcttcggcac
     2821 gttctccacc agccagcgca aggcgcgcac cgcgcgcaac ccgcagacgg gagaagccat
     2881 caagattgcg aagcgccgtg tcgcgcgctt caaggcgggc aaagcactca aggacgcagt
     2941 ccgctagctg caactcctcg cacttctccg acggaccatt ccccagatgg tccgttccgg
     3001 ccgaggtttg ttatactgtc ggttcggttt aacgcctgat ttcacagcag atagcagcat
     3061 aggcgcgtag ctcagctggt tagagcgcct ccctgacacg gaggaggtca gtggttcgag
     3121 tccacccgcg cctaccactt taggttcatg agccaggtca cagtcacact gccggatgga
     3181 tccagcaagg ctgtatccgc gggagcgcca gtgcgcgccg tcgcggaagc gatctctccg
     3241 cgcctggccc aggcggcgct cgcggcggtg gtcgacgaca agctcgtgga cctcacctac
     3301 ccgctcgcgg ccgacgcgaa ggtccgcatc gtcaccgaca aaagcccgga agcgctgatg
     3361 ctggcgcggc acagcaccgc ccatctgatg gccgccgcgg tgaccaatct cttccccgcc
     3421 gtccagtgcg gcatcggccc gcccaccgac gagggtttct tctacgactt cgtcgtaccg
     3481 cgcccgttcg tgcccgagga cctcgaggcc atcgaggcga agatgcgcga gctggcgtcg
     3541 caggacttcg tctacgagcg gcagatgtgg ccgcgcgacg aggccaagcg cttcttcggc
     3601 gcccgcggcg agccgctgaa ggtgcagctg atcgacgaga agaccgaggg gcagtccgag
     3661 gtgtcggtct acaccatcaa ggacaaagag accttcgtgg acttctgcgt cgggccgcac
     3721 gtgccgtcca ccggaaagct caaggcgttc aagctgctca ccacctcgaa cgcctactgg
     3781 aagggcgatg cgggcaacca gccgatgcag cggctgtacg gcaccgcgtt cctgtcggaa
     3841 aaggagctgg cggatcacct caagcggatt gaggaagcca agctgcgcga ccaccggaag
     3901 atcggcaagg accagaagct gttcatgttc caccagtggg ctccgggtgc gcccttctgg
     3961 ttgcccaagg gc
//
LOCUS       DASSYW010000577         3070 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_148832, whole genome shotgun sequence.
ACCESSION   DASSYW010000577 DASSYW010000000
VERSION     DASSYW010000577.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3070)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3070)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3070
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_148832"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..817
                     /locus_tag="VFN38_09210"
     CDS             <1..817
                     /locus_tag="VFN38_09210"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HET9011980.1"
                     /translation="YRARLAALAARIDAPGATAERDALRAELIALGKGLEQDLAELGA
                     LKDEAKSLVERWKALQASGAPAFTAERPVVADHIGASTFVEKGWSRISLGDYAGAEDS
                     LTKALALAPNNPQAESLLGWALMLQEKYDDALMQFQKVLMREPGNALARINVGYICLK
                     KRIFGEAIEHLSRAIRLDSDRKATLYAHFYLGLVYLERDMFEDAQTFFQKTIALGPNL
                     IEAYYELGRAFWFNGQKQEAVQTWRDGLAANKFNPWGKKCAEVLHTVEQGGEP"
     gene            835..1911
                     /locus_tag="VFN38_09215"
     CDS             835..1911
                     /locus_tag="VFN38_09215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011981.1"
                     /translation="MRRALGGAVLVVAAALAPATPPLQAQDDAPRRLDVGRFTAVFFP
                     SEELLARSLLAGAARNDSFPGLPRPRQRVLLAIAPDAARFRAWVGPYAPEWGVAVAFP
                     ESRRIVMQGRAAGSDAGDPQEVLRHELAHLALHERLGDRPPRWFDEGYASVAAHEWRR
                     DDVLAANVALALRGTPSLAQLDESFGRGSVAAQSAYALSYRAVTELASLDPERGLALL
                     FRYWEQNPSLDVAVRQAYGITLAGFEREFQIRTRRRYGGLALFADLSLLLLVASVLLL
                     PFIVLRRVRDRRRMRAMLAADAAAERAEEESALAALLGEVRDPPPAAPHVPGAGPAAT
                     SANAASERLPRPRPDGVSDDGTIA"
     gene            1945..2118
                     /locus_tag="VFN38_09220"
     CDS             1945..2118
                     /locus_tag="VFN38_09220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011982.1"
                     /translation="MPQIDTISPSRPLLWWGIALVTILLGYADLARGGMTIAPILLVA
                     GYCVLVPLAILRS"
     gene            2207..2280
                     /locus_tag="VFN38_09225"
     tRNA            2207..2280
                     /locus_tag="VFN38_09225"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2241..2243,aa:Val,seq:tac)
     gene            2423..>3070
                     /locus_tag="VFN38_09230"
     CDS             2423..>3070
                     /locus_tag="VFN38_09230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011983.1"
                     /translation="MTAVPSVASAQRQQAPGPDTKKVLVTTFRGDVEGGVRLADEIRN
                     RVGSDFSIRTLMPTSKKDINSTLEQSGYRADSALSANDIKELAKLVRADEIIDGSVTK
                     TAAGYRINARMFLPRDAALSQPLLTTESANLGDVAKQIVREYDAARKQLRDNQECENA
                     IRDKKLDVAIAAARKGIATYPKATLSRLCLASAFQQWKTTADSTRPWTDSVIAVTR"
BASE COUNT          440 a         1080 c         1092 g          458 t
ORIGIN      
        1 gtaccgggcg cggctcgccg cgctcgccgc gcgcatcgat gcaccgggag cgaccgccga
       61 gcgcgacgcg ctccgcgccg agctgatcgc gctggggaag gggctggagc aggatctcgc
      121 cgaactgggg gcgctgaagg acgaagccaa gtcgctcgtg gagcggtgga aggcgctcca
      181 ggcgagcggg gcgcccgcct tcaccgccga gcgccccgtc gtcgccgacc acatcggtgc
      241 gtccaccttc gtcgagaagg ggtggagccg gatctcgctc ggcgactatg ccggcgcgga
      301 ggactcgttg acgaaggcgc tcgcgctggc cccgaacaat ccgcaggccg agtcgctgct
      361 cggctgggcg ctgatgctcc aggagaagta cgacgacgcg ctgatgcagt tccagaaggt
      421 gctcatgcgg gagccgggca acgcgctggc gcgcatcaac gtgggctaca tctgcctgaa
      481 gaagcgcatc ttcggcgagg cgatcgagca cctctcgcgg gccatccgcc tcgactccga
      541 ccgcaaggcg acgctgtacg cgcacttcta tctggggctc gtgtacctgg agcgcgacat
      601 gttcgaggac gcgcagacct tcttccagaa gacgatcgcg ctggggccga acctcatcga
      661 ggcctactac gagctcggtc gggcgttctg gttcaacggc cagaagcagg aagcggtgca
      721 gacgtggcgc gacggcctcg cggcgaacaa gttcaatccg tggggaaaga agtgcgccga
      781 ggtgcttcac accgtggagc agggaggaga gccgtagcgg ctgcgcgcgg gcgggtgcgc
      841 cgcgcgctcg gcggcgccgt gctggtcgtc gcggccgcgc tggcgccagc cacgccgccg
      901 ctgcaggcgc aggacgatgc cccccgccgg ctggacgtgg ggcgcttcac cgcggtgttc
      961 ttcccgtccg aggagctgct cgcccgctcg ctgctggccg gcgcggcgcg caacgacagc
     1021 tttcccgggc tgccgcgccc ccggcagcgg gtcctgctgg cgatcgcccc ggatgcggcc
     1081 cggttccgcg cctgggtcgg cccgtacgcc cccgagtggg gggtcgccgt cgccttcccg
     1141 gagtcgcgcc gcatcgtcat gcaggggcgc gcggcggggt cggacgcggg cgatccgcag
     1201 gaggtgctgc gccacgagct ggcgcacctc gccctgcacg agcggctcgg cgaccggcca
     1261 ccccgctggt tcgacgaagg gtacgcgagc gtggccgccc atgagtggcg ccgcgacgac
     1321 gtgctggcgg cgaatgtcgc cctcgcgctc cgcggcaccc cctcgctcgc ccagctcgac
     1381 gagagcttcg ggcgcggctc ggtggcggcg cagtcggcct acgccctgag ctaccgtgcc
     1441 gtcaccgagc tcgcgtcgct cgacccggag cgcgggctcg ccctgctgtt ccgctactgg
     1501 gagcagaatc cctcgctcga cgtggcggtc cggcaggcgt acggcatcac cctggccggc
     1561 ttcgagcgcg agttccagat ccgcacgcgg cggcggtacg gggggctcgc cctgttcgcc
     1621 gacctgtcgc tgctcctgct cgtcgcgtcg gtgctgctgc tccccttcat cgtcctgcgg
     1681 agggtgcgcg acaggcggag gatgcgcgcc atgctcgcgg cggacgccgc ggcggagcgg
     1741 gcggaggagg agagcgcgct ggcggcgctg ctgggcgagg tgcgggaccc gcctcctgcg
     1801 gccccccatg tccccggtgc cggcccggcg gccacctccg cgaacgccgc gtcggagcgg
     1861 ttgccgaggc cgcgtcccga tggcgtaagc gacgatggga ccatcgcttg acacgcttcg
     1921 gagggggggg tacactactg cccgatgcct caaatcgata ccatctctcc gtcgcgaccc
     1981 ctcctctggt ggggaatcgc gctcgtcacg attctgctcg gctacgccga tcttgcccgc
     2041 ggcgggatga cgattgcacc gatcttgctc gtagcggggt actgtgtgct ggtccccctg
     2101 gcgatcctgc gctcctgacg tagcggttga tcgggcggcc acttcacaat ggatcgacac
     2161 ctggcgggcg cagccgacga cggcttcgct cgtgcgagcg ttcgccgggc gaatagctca
     2221 gttggttaga gcgcctgcct tacacgcagg atgtcggggg ttcgagtccc tcttcgccca
     2281 tgttgttccg cgccggttcc gcgattcggc ggaccctgcg ccagcggtcg gggtacgatc
     2341 gatcaacgct ttggaggtta cgactgtgaa ggcttcgcat cgctctgcgc tcacggccgc
     2401 tggactcgcc gcggtattcg ccgtgacggc cgttccgtcg gttgccagcg cccagcggca
     2461 gcaggctccc ggccccgaca ccaagaaggt gctcgtcacg acgttccgtg gggacgtcga
     2521 gggcggcgtg cggctggcgg acgagatccg caaccgcgtc ggcagcgact tcagcatccg
     2581 gacgctgatg ccgacgagca agaaggacat caacagcacg ctggagcagt cgggctaccg
     2641 tgccgactcg gccctcagcg ccaacgacat caaggagctg gccaagctcg tccgcgccga
     2701 tgagatcatc gacggcagcg tgacgaagac ggcggccggc taccgcatca acgcgcggat
     2761 gttcctgccg cgcgatgccg ccctgtccca gccgctgctc accaccgagt cggcgaacct
     2821 gggcgacgtg gccaagcaga tcgtccgcga gtacgacgcg gcccgcaagc agctccgcga
     2881 caaccaggag tgcgagaacg cgattcgcga caagaagctc gacgtcgcca tcgccgccgc
     2941 gcgcaagggc atcgccacgt atcccaaggc gaccctctcg cgcctctgcc tcgccagcgc
     3001 cttccagcag tggaagacga cggccgattc cacccggccg tggaccgact cggtgatcgc
     3061 cgtcacccgc
//
LOCUS       DASSYW010000578         2446 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1060552, whole genome shotgun sequence.
ACCESSION   DASSYW010000578 DASSYW010000000
VERSION     DASSYW010000578.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2446)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2446)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2446
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1060552"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1402
                     /gene="lon"
                     /locus_tag="VFN38_09235"
     CDS             <1..1402
                     /gene="lon"
                     /locus_tag="VFN38_09235"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: protein motif:HMM:TIGR00763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HET9011984.1"
                     /translation="GPILCLVGPPGTGKTSLGEAISTAIGRKFYRISVGGVRDEAEIR
                     GHRRTYVGAMPGLLIQAMRRVQVKDPVLMIDEIDKMSGGGPSGDPTAAMLEVLDPSQN
                     DEFVDHYLNLPFDLSGALFICTANNLFDIPAPLRDRMEVIRIAGYTVEEKVEIAWRYL
                     LPRLLEEHGISDKDIQFTDESLSFISNRYSREAGLRNFERNIAAIMRKRARRKAEGEE
                     GAWVIDADKVEEILGIPRYAVESADTVPEIGVVTGLAWTASGGDLMVIEALRMPGAGR
                     LTVTGQLGDVMRESVDAAFSYVRSRAAAIGIPDAAFKEFDVHVHLPAGAIPKDGPSAG
                     ITLTLAIASALSQRPVRRDVAMTGEVTLRGKVLEIGGVKEKVLAAYRAGLRQLIMPDS
                     NEKDLRDVPDEVKKQVAFTFVKTMDEVLRLALMEPTEDDAPPGERPARSTSPESYTSV
                     PVTKELDTEAAAVNAP"
     gene            complement(1389..>2446)
                     /locus_tag="VFN38_09240"
     CDS             complement(1389..>2446)
                     /locus_tag="VFN38_09240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011985.1"
                     /translation="KKFDEEMPAQELAGEEAAYKVLGLLPDSMDLRKFLLAVLNEQVI
                     GYYDPATKVLYVVEGADEQTVGITVTHELVHALQDQYINLDSIQKATSDNDRLTAAQA
                     VIEGQAQFEQLSIMLGGSDNVALRVGGRDKIREMIRENQSAMPVFATAPMMIQESLLF
                     PYLSGADFVARFKERRPGANPLTAMPRSTEQVLHTPAYFGETPDEPSVVALPAPRGAS
                     RTYENTLGEFGTRLFLYQHIRDEQDAARGAAGWDGDRYVVLQGAGGRGIVWASLWDTA
                     LEAAEFSDILTRATAKRTGAGEASVPGGASFAAKGRTTRIVARPVGDRTLIVYSDLPD
                     AMSGGVIDAAAIRVTAR"
BASE COUNT          368 a          830 c          884 g          364 t
ORIGIN      
        1 cggtccgatc ctctgcctcg tcggcccccc gggcaccggc aagacatcgt taggcgaggc
       61 gatctcgacg gcgatcgggc ggaagttcta ccgcatctcg gtcggcggcg tgcgcgacga
      121 agccgagatc cgcggccacc gccgcaccta cgtcggggcg atgccggggc tgctcatcca
      181 ggcgatgcgc cgggtgcagg tgaaggaccc ggtgctgatg atcgacgaga tcgacaagat
      241 gtccggcggg ggcccctcgg gcgatccgac cgccgcgatg ctcgaggtgc tggacccgag
      301 ccagaacgac gagttcgtgg atcactacct gaacctgccg ttcgacctct cgggcgcgct
      361 gttcatctgc acggcgaaca acctgttcga catccccgct ccgctgcgcg accggatgga
      421 ggtgatccgc atcgccggct acacggtgga ggagaaggtc gagatcgcgt ggcgctacct
      481 gctgccgcgg ctcctcgagg agcacggcat cagcgacaag gacatccagt tcaccgacga
      541 atcgctgtcg ttcatttcca accgctactc gcgcgaggcg gggctgcgca acttcgagcg
      601 caacatcgcg gcgatcatgc gcaagcgggc gcgccggaag gcggagggcg aggagggcgc
      661 gtgggtgatc gacgccgaca aggtggagga gatcctcggc atcccgcgct acgcggtgga
      721 gtcggcggac accgtgccgg agatcggggt ggtgacgggg ctggcgtgga cggccagcgg
      781 cggcgacctg atggtgatcg aggcgctgcg catgccgggc gcggggcgtc tcaccgtcac
      841 cggccagctt ggcgacgtga tgcgcgagag cgtggacgcg gcgttctcgt acgtccggtc
      901 gcgggcggct gccatcggca tccccgacgc ggcattcaag gagttcgacg tgcacgtgca
      961 tcttccggcg ggggcgatcc cgaaggacgg acccagcgct ggcatcaccc tcacgctcgc
     1021 catcgccagc gcgctgagcc agcggccggt gcggcgcgac gtcgccatga cgggcgaggt
     1081 gacgctgcgc ggcaaggtgc tcgagatcgg cggcgtgaag gagaaggtgc tggcggcgta
     1141 ccgcgccggc ctgcggcaac tcatcatgcc ggactccaac gagaaggacc tgcgcgacgt
     1201 gcccgacgag gtgaagaagc aggtcgcgtt caccttcgtg aagacgatgg acgaggtgct
     1261 gcgcctggcg ctgatggagc cgacggagga cgacgcgccg ccgggcgaac ggccggcgcg
     1321 ctccacttcg ccggagagct acacgtcggt gccggtgacg aaggagctcg acacggaagc
     1381 cgcggcggtc aacgcgccgt gacccggatg gcggcggcgt cgatgacgcc gccgctcatc
     1441 gcatcgggga ggtcgctgta cacgatcagg gtgcggtcgc ccacggggcg ggcgacgatg
     1501 cgcgtcgtgc gccccttggc ggcgaagctc gcgccgcccg gcacgctggc ttcgccggct
     1561 ccggtgcgct tcgccgtggc gcgggtgagg atgtcggaga actccgccgc ctccagcgcg
     1621 gtgtcccaca gcgacgccca gacgatcccg cggccgcccg ccccctgcag caccacgtac
     1681 cggtcgccat cccagccggc ggcgccgcgc gccgcgtcct gctcgtcgcg gatgtgctgg
     1741 tacaggaaca ggcgcgtccc gaactcgccc agcgtgttct cgtaggtgcg gctcgcgccg
     1801 cgcggcgccg gcagcgccac cacgctcggc tcgtccggcg tctcgccgaa gtacgccggc
     1861 gtgtggagca cctgctcggt ggagcgcggc atcgcggtga gcgggttggc cccggggcgc
     1921 cgttccttga agcgcgccac gaagtcggcg ccgctcaggt agggaaagag cagcgactcc
     1981 tggatcatca tcggcgcggt ggcgaacacc ggcatcgcgc tctggttctc gcggatcatc
     2041 tcgcggatct tgtcgcgccc ccccacccgc agcgccacgt tgtccgagcc gccgagcatg
     2101 atggagagct gctcgaactg cgcctgcccc tcgatcaccg cctgcgcggc ggtgaggcgg
     2161 tcgttgtccg acgtcgcctt ctggatcgag tcaaggttga tgtactggtc ctggagggcg
     2221 tgcacgagct cgtgggtgac ggtgatcccc accgtctgct cgtcggcccc ctccacgacg
     2281 tacagcacct tcgtcgccgg gtcgtagtag ccgatcacct gctcgttgag cacggcgagc
     2341 aggaacttcc gcaggtccat cgaatcgggc agcaggccga gcaccttgta ggcggcctcc
     2401 tcgccggcga gctcctgggc cggcatctcc tcgtcgaact tcttca
//
LOCUS       DASSYW010000579         3730 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_619109, whole genome shotgun sequence.
ACCESSION   DASSYW010000579 DASSYW010000000
VERSION     DASSYW010000579.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3730)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3730)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3730
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_619109"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..208
                     /locus_tag="VFN38_09245"
     CDS             <1..208
                     /locus_tag="VFN38_09245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011986.1"
                     /translation="GTVPGFPTSVVAFATDIPALPAWGRPYLFGPGSIHVAHRDDEHV
                     SLAELASAVERYESLVRAILATRA"
     gene            complement(234..1346)
                     /locus_tag="VFN38_09250"
     CDS             complement(234..1346)
                     /locus_tag="VFN38_09250"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HET9011987.1"
                     /translation="MSKRIALVLGGGGLKGFAHIGVLRALAERNIVPDVYAGTSIGAL
                     IAAAHLSGSSVEALAERAEALKRKDLFRLNHFGMLLDRMRAPSIYLEEPLRELVAGII
                     PDITFADLPKPLFVNSVDLDQGARVVWGLPGLQDVSVRDAVYASCALPGFFPPGRVGD
                     RTCIDGGVVDNLPVSMASHFADIIIAVDVGSSDASQSARAEGQGFATIYMRAATMMMH
                     ALQQFPLERWHGPPMVLIRPKLNDANWLSFTDTSSSIAQGYEAATRALERFDSYWERT
                     GCVFPRRRVQIDVDADRCTGCGTCVSLAPAVMGLDATRKAFPRTRVVEWSPADGGFVH
                     ECPTIAITATNVDRRASQTAATAEQSHDPTPSGAGG"
     gene            complement(1509..1889)
                     /locus_tag="VFN38_09255"
     CDS             complement(1509..1889)
                     /locus_tag="VFN38_09255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011988.1"
                     /translation="MLARSRNVFTLALALSVASVVIASPARAQDAALAPAPATTPVAP
                     QPATAPAPAGPTMEAAAVGVRHAPVTSSTTTAPRGGYGQPVALMVVGGAAVLVGLIIG
                     NGAGAAIAVGGAVIGLVGLYQYLQ"
     gene            2040..3671
                     /locus_tag="VFN38_09260"
     CDS             2040..3671
                     /locus_tag="VFN38_09260"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HET9011989.1"
                     /translation="MPTLRSLLSVVLLVTPVLAAAQPRPRVTTAEIDGHLRFLSSDLL
                     EGRAPATRGGRLAAEYIASQLRAAGVEPGVSGSYFQSVPIDIVAANPATIRAAASGRA
                     TGTLRYPEDVVIWAGSATGASDARGEVVFVGYGAAAPEYRWDDFKGTDLRGKILLVLV
                     NDPPATAGEPALFGGPAMTYYGRWTYKFEEAERRGAAGMLIVHTAERAGYPWHTVVGS
                     WAKEQRMLPRDPKLPAPLGVQGWITDSAAAALLKQAGLDLAALRGQAASRDFRPVATG
                     ISLDLHFDNAVQHLASENVVGVVRGRDARLGKEYVALSSHWDHHGIGPAVNGDSIYNG
                     ASDNASGVADLLAIARAAAAGPRPRRSLLFVFVTAEESGLLGSAYFARNPTVPAAQIV
                     ANLNLDGGNLLGRTRDLNVLGDTKSSLGPQLAAMIRPQGMRLSADLHPEAGHFYRSDH
                     FSFAKAGIPAVSIGAGTDVVGKPAGWGAQQNDDYTAHRYHQPSDAYRPDFDLAGAAQL
                     SEIVLRFAQQLANAPGVPTWNRDAEFRAARPAAQP"
BASE COUNT          525 a         1341 c         1374 g          490 t
ORIGIN      
        1 cggcaccgtg cccggctttc cgacgtcggt ggtggcgttc gccaccgaca tcccggcgct
       61 gccggcgtgg gggaggccgt acctgttcgg gccgggctcc atccacgtgg cgcaccggga
      121 cgacgagcac gtgtcgctgg cggagctggc cagcgcggtg gagcgctacg agagcctcgt
      181 tcgcgcgatc ctcgccacgc gcgcctgagg ccaggccggg aggcgagcgc gcctcaccct
      241 cccgcgccgc tcggggtggg atcgtggctc tgctccgccg tcgcggccgt ctgtgaggcg
      301 cggcggtcca cgttcgtcgc cgtgatcgcg atcgtcgggc actcgtgcac gaagccaccg
      361 tccgccggcg accattccac cacccgggtg cgcggaaacg ccttgcgggt cgcgtcgagc
      421 cccatcacgg cgggcgcgag cgacacgcag gtgccgcagc cggtgcagcg gtccgcgtcc
      481 acgtcgatct gcacgcgacg gcgcggaaac acgcaccccg tccgctccca gtacgagtcg
      541 aaccgctcca gcgcccgtgt cgccgcctcg tagccctgcg cgatgctgga cgacgtgtcg
      601 gtgaagctca gccagttcgc gtcgttcagc ttcgggcgga tgagcaccat cggcgggccg
      661 tgccagcgct cgagcgggaa ctgctgcagc gcgtgcatca tcatggtggc ggcgcgcatg
      721 tagatcgtcg cgaacccctg cccctcggcc cgcgcgctct gcgacgcgtc ggagctgccc
      781 acgtcgacgg cgatgatgat gtcggcgaag tgcgaggcca tggagacggg aaggttgtcc
      841 accacgcccc cgtcgatgca ggtgcgatcg cccacgcggc ccggagggaa gaagcccggc
      901 agggcgcacg acgcgtacac cgcgtcgcgc acggagacgt cctgcaggcc gggcagcccc
      961 cacaccacgc gcgcgccctg gtcgaggtcc accgagttga cgaacagggg cttcggcagg
     1021 tcggcgaagg tgatgtccgg gatgatgccc gcgacgagct cgcgtagcgg ctcctccaga
     1081 tagatggagg gcgcgcgcat gcggtcgagc agcatgccga agtggttgag ccggaacagg
     1141 tccttccgct tcagcgcctc cgcccgctcg gcgagggcct ccaccgacga cccgctgagg
     1201 tgcgcggcgg cgatgagcgc gccgatgctc gtgccggcat agacgtcggg aacgatgttc
     1261 cgttcggcca gggcgcgcag caccccgatg tgggcgaatc ccttcagccc gccgccgccg
     1321 aggacgaggg caatgcgttt gctcacgaac gagctccgtg aatgcgcgga gcgacatgtt
     1381 ccgcgcgcag cgaactggtc aagtggcgtg ccgccggtga cgggtatgga ggcgggaggg
     1441 gaggaaacga ccgcggggcg gacgcgccat cccggcgcat ccgccccgcc tgccgcgccg
     1501 gagccggcct actgaagata ctggtagaga ccgacgaggc cgatgaccgc gccgccgacg
     1561 gcgatcgccg cacccgcacc gttgccgatg atgagcccga cgagcacggc ggcgccgccc
     1621 accaccatca gcgccaccgg ctggccgtag ccgccgcgcg gggcggtcgt cgtcgaggag
     1681 gtgacgggag cgtgccgcac gccgaccgcg gccgcctcca tcgtcgggcc ggcgggcgcc
     1741 ggggccgtcg cgggctgcgg cgcgacgggc gtggtggccg gcgcgggagc gagtgcggcg
     1801 tcctgcgcgc gggccggcga ggcgatgacg accgacgcga cgctcagcgc cagggcgagc
     1861 gtgaagacgt tgcgggaacg agcgagcatg tcgaagtccg gtgcgggtag atcggcgtgg
     1921 cgacgtggga tcgtcgccgc gcggagaatg gtggcgcggt gaccgcgcgc ggtctagtct
     1981 tgcactgcgc cagcgatgca atgtactgac caccgttctc ccaatcgcgt aacgtgccga
     2041 tgccgaccct gcgctcgctt ctgtcggttg tgctcctggt cacgcccgtc ctcgccgcgg
     2101 cgcagccgcg cccgcgcgtc acgacagccg agatcgacgg gcacctccgc ttcctgagct
     2161 cggacctgct ggaggggcgc gcccccgcga cgcgcggtgg ccgcctggcg gcggagtaca
     2221 tcgcgagcca gctccgcgcc gccggcgtgg agccgggcgt gagtggcagc tacttccaga
     2281 gcgtccccat cgacatcgtc gcggccaacc cggcgacgat ccgcgccgcc gcctccggcc
     2341 gggccaccgg caccctccgc tatcccgagg acgtggtgat ctgggcgggg agcgcgaccg
     2401 gcgcgagcga cgcgcgcggg gaggtggtgt tcgtcgggta cggcgcggcg gccccggagt
     2461 accggtggga cgacttcaag ggcaccgacc tgcgcggcaa gatcctgctc gtcctggtga
     2521 acgacccgcc cgccacggcc ggcgagccgg cgctgttcgg ggggccggcg atgacctact
     2581 acggccgctg gacgtacaag ttcgaagagg cagagcggcg cggcgcggcc gggatgctca
     2641 tcgtgcacac cgccgagcgg gccgggtatc cctggcacac ggtggtcggc tcgtgggcca
     2701 aggagcagcg catgctgccg cgcgacccga agctgccggc accgctcggg gtgcagggct
     2761 ggatcacgga cagcgccgcc gccgcgctcc tgaagcaggc gggcctcgat ctcgccgcgc
     2821 tccgtggcca ggcggcgagc cgcgacttcc gcccggtggc caccggcatc tcgctcgacc
     2881 tgcacttcga caacgcggtg cagcacctcg cgtcggagaa cgtcgtgggg gtggtgcgcg
     2941 gccgcgatgc gcggctcggc aaggagtacg tcgcgctgtc gtcacactgg gaccatcacg
     3001 gcatcgggcc ggcggtgaac ggcgactcga tctacaacgg cgcgagcgac aacgcgtcgg
     3061 gggtggccga cctgctggcg atcgcccgtg ccgcggcggc ggggccccgg ccccggcggt
     3121 cgctcctctt cgtgttcgtc acggccgagg agtcgggcct gctcggctcc gcgtacttcg
     3181 cccggaaccc caccgtgcca gccgcgcaga tcgtcgccaa cctgaacctc gatggcggca
     3241 acctcctcgg ccgcacccgc gacctcaacg tgctgggtga caccaagagc tcactcggcc
     3301 cgcagctcgc cgcgatgata cgcccgcagg ggatgcgcct cagcgccgac ctgcacccgg
     3361 aggcggggca cttctaccgc tccgaccact tctccttcgc caaggcgggg atcccggcgg
     3421 tgtcgatcgg cgcgggcacc gacgtcgtgg gcaagccggc gggatggggc gcgcagcaga
     3481 acgacgacta tacggcgcat cgctaccacc agccgtccga cgcatatcgt cccgacttcg
     3541 acctcgccgg cgcggcgcag ctctcggaga tcgtgcttcg cttcgcgcag cagctggcga
     3601 atgcgcccgg cgttcccaca tggaatcgcg acgccgagtt ccgcgcggcg cgcccggcgg
     3661 cacagccgtg agcgtggacc agtcgcccac gcgggcgacg ggcgtcgacg cacggctggt
     3721 tcgcgccatc
//
LOCUS       DASSYW010000580         3168 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_405381, whole genome shotgun sequence.
ACCESSION   DASSYW010000580 DASSYW010000000
VERSION     DASSYW010000580.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3168)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3168)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3168
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_405381"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(163..1083)
                     /gene="bla"
                     /locus_tag="VFN38_09265"
     CDS             complement(163..1083)
                     /gene="bla"
                     /locus_tag="VFN38_09265"
                     /EC_number="3.5.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="subclass B3 metallo-beta-lactamase"
                     /protein_id="HET9011990.1"
                     /translation="MSFAMRRALVVAGGFAALTLTPPRGAEAQTTDSLRAGYSAAQCP
                     SCAEWNAPASPVRLHGNVYYVGTRGLSAILLTSDSGHVLIDAGLPESAEPIMAHIRAL
                     GFRVEDVKLIVNSHAHYDHAGGIAAIQRASGARVVASPSSAAVLRTGQAGRDDPQYGI
                     ALAFPAVTGTSVRVLADGDTLRVGPIALVAHFTPGHTPGGTSWSWHACEGAGCLDFVY
                     ADSQTPVSSDDFLFTRSTAYPTALRDFARGFEVLDQLRCDVLLTPHPSASRLWERIES
                     RRLEDPQGCRRYVAGARAALARRVAAESGK"
     gene            complement(1089..1337)
                     /locus_tag="VFN38_09270"
     CDS             complement(1089..1337)
                     /locus_tag="VFN38_09270"
                     /inference="COORDINATES: protein motif:HMM:NF025601.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4342 domain-containing protein"
                     /protein_id="HET9011991.1"
                     /translation="MEEIKVSGAKLKSTLKQLIREGNVRRVILRNGEGRTLLDMPLSV
                     GIAGAVLLPFWVAVGAVVALATDFTILVERDPDLPAKK"
     gene            1577..2308
                     /locus_tag="VFN38_09275"
     CDS             1577..2308
                     /locus_tag="VFN38_09275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011992.1"
                     /translation="MRVRAVVAIAVLLLPTQLQAQRRVPGIGRRGPAQPVPLSPQPAP
                     IARAIAYQRLHVSAESYPMISYVQAPNFAGDGRASSWTAFGMGARAEYRLTPHASATM
                     DLTSSVAGSPLIVQTAEIGTRLRPRVVDFDQRTFPFLDLRLAYISAYDRSLGAVTSDP
                     SGYPLPSGVVGARSSSGFGAVAGVGVEYALTHTFFITSAGSLVRSHMTSQDFSSSQAV
                     VPSFAMTSYRLTLGVRYNPVRMVMP"
     gene            complement(2289..2987)
                     /locus_tag="VFN38_09280"
     CDS             complement(2289..2987)
                     /locus_tag="VFN38_09280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011993.1"
                     /translation="MTLLPLHIVAGLTAIVTGYVAIAALKGARLHRRSGMIFVYAMLM
                     LGLTGAIMATLKSQPANIVGGIVALYMAATGVLTFHRRDAARPWIDAISLLAALGIAW
                     FSARFGLEASRSATHAINGVPAAPLFVFAGIALLAAAGDLRMLVTGGLRGRHLLARHL
                     WRMSFALFIATGSFFIGQAKVIPKPVRILPLLAVPAFLPLVLLFYWLVRVSLARRAFS
                     RASEPRDVPMASPS"
BASE COUNT          517 a         1059 c         1149 g          443 t
ORIGIN      
        1 catttgccgc aacctgaccg cttgcatgcc cgccgagtcg gcgaggccga aggcgccgat
       61 ggcggcggcg agcgccgcag cgtggtgcga atcccgcggg cttcggtcga cgcgttcatc
      121 gatgattccc cgtcgagaga cgaaaggctc ggcagcgtct gcctactttc cggactccgc
      181 ggccacgcgc cgcgcgagcg cggcccgcgc tccggctaca taccgcctgc acccctgagg
      241 atcctcgagc ctgcgcgact cgatgcgctc ccagagccgc gacgccgacg gatgcggcgt
      301 gagcagcacg tcgcagcgga gctggtcgag cacctcgaag ccgcgcgcga agtcccggag
      361 tgccgtcgga taggccgtgc tccgagtgaa aagaaagtcg tccgacgaca cgggggtctg
      421 gctgtccgcg tagacgaaat cgaggcaacc cgcgccctcg cacgcgtgcc acgaccagct
      481 cgtgccgccg ggagtgtgtc ccggggtgaa atgcgcgacg agtgcgatcg ggccgacgcg
      541 cagggtgtcg ccgtcggcga gtacgcgcac gctcgtgccc gtcaccgcgg gaaaagcgag
      601 ggcgatgccg tactgcggat cgtcgcggcc ggcctggccg gtgcgcaaca ccgcagcgct
      661 cgaggggctc gccaccactc gcgccccgga ggcccgctgg atcgcggcaa tgccacccgc
      721 gtgatcgtag tgggcgtgcg agttgacgat cagcttcacg tcctcgacgc ggaagccgag
      781 ggcgcggatg tgcgccatga tgggctcggc cgattcgggg aggccggcgt cgatcaggac
      841 gtgaccggaa tccgacgtga gcaggatcgc gctcaacccg cgcgtgccga cgtagtacac
      901 gttgccgtgc agacgcaccg gcgacgccgg ggcgttccat tcggcgcagc tcggacactg
      961 cgccgcggag tagccggcgc gaagcgagtc ggtggtctgg gcctcagcac cgcgcggcgg
     1021 cgtgagcgtg agggcggcga atccacccgc gacgacgagc gcacgccgca tcgcgaacga
     1081 cacgggtgtc acttcttggc cggcaggtcc ggatcccgct ccacgagaat cgtgaagtcg
     1141 gtcgcgagcg cgaccaccgc gccgacggcc acccagaagg ggagcagcac ggcgccggcg
     1201 atccccacgc tgagcggcat gtcgagcagc gtacggccct cgccgttgcg caggatgacg
     1261 cggcgaacat ttccctcgcg gatgagctgt ttcagcgtcg acttgagctt ggcgcccgat
     1321 accttgatct cttccatgac gaacgatgcc tccaggctcg acggcggcga gaggccaggt
     1381 agccgccgag gaaaagtgtg ccgaatggga acgcgagcag accgaggggg aacacgaatg
     1441 tgggacccac ccacgatccg aagctacgtc gggccgggga cctggaggag tgtcatcttg
     1501 cgcctctgcc cgaggggccc aagactgtag aggtagctcg tggacttctc aggacgtggg
     1561 acgtcaggag gtcgccatgc gtgtccgtgc cgtcgtcgcg atcgcggtgt tgctgctccc
     1621 gacccagctc caggcacagc gccgagtgcc ggggatcgga cgacgagggc cggcgcagcc
     1681 ggtgcccctc tccccgcagc cggcgccgat cgcgcgagcg atcgcctatc agcggctgca
     1741 cgtctcggcc gagagctatc cgatgatcag ctacgtgcag gcgccgaact tcgccggcga
     1801 cgggcgcgcg tcgtcgtgga cggcgttcgg gatgggcgcg cgcgccgagt atcggctcac
     1861 gccgcatgcg tcggcgacga tggatctcac gtcgtcggtg gccggcagcc cgctgatcgt
     1921 gcagacggcg gagatcggga cgcgactgcg cccgcgcgtc gtggacttcg accagcgcac
     1981 cttccccttc ctcgacctgc gcctcgccta catctcggca tacgaccgca gcctgggggc
     2041 cgtgacgtcc gatccctccg ggtatccgct cccgtcgggc gtcgtgggcg cccgctccag
     2101 cagcggattc ggcgccgtgg ccggcgtggg ggtggagtat gcgctcacgc acaccttctt
     2161 catcacgagc gcgggatcgc tggttcgaag ccacatgacg tcgcaggact tctcgagctc
     2221 gcaggcggtg gtgccgagct tcgcgatgac gtcgtaccgg ctcacgctgg gcgtgcggta
     2281 caatcccgtc aggatggtga tgccataggc acgtcacggg gctcgctcgc gcgcgagaac
     2341 gcccggcgcg cgagcgacac gcgcaccagc cagtagaaca ggagcacgag ggggaggaag
     2401 gcggggacgg cgagcagggg aaggatgcgc accggcttcg ggatcacctt cgcctggccg
     2461 atgaagaacg acccggtggc gatgaacagg gcgaaggaca tgcgccagag gtggcgggcg
     2521 aggaggtgcc gtccgcgaag cccaccggtc acgagcatgc gcaggtcgcc cgccgccgcg
     2581 aggagggcga tgccggcgaa gacgaagagc ggcgccgccg gcacgccgtt gatcgcatgc
     2641 gtggcgctgc gcgatgcctc gaggccgaat cgcgcgctga accaggcgat gccgagcgcc
     2701 gcgagcagcg agatcgcgtc gatccagggg cgcgcggcat cccggcggtg aaaggtgagc
     2761 acgcccgtgg ccgccatgta gagcgccacg atgccaccga cgatgttggc cggctggctc
     2821 ttcagggtcg ccatgatcgc gccggtgagc cccagcatca gcatggcgta gacgaagatc
     2881 atcccgctgc ggcgatgcag ccgcgcgccc ttgagggcgg cgatggcgac gtagccggtg
     2941 acgatggccg tgagtccggc cacgatgtgc agcggcagca gcgtcatgcg atcgagcctc
     3001 cggcggagtg gtccatggct cgattacggt ataactaagt ttctagtttc acttctccgc
     3061 gccggaggcc tggctcgggc caacatccag ggaaaccggg gctgcgccgg cgtcgtacgg
     3121 ccttcatggc cccgccggcg ccccgcttgg accgaaccgg gccagcgc
//
LOCUS       DASSYW010000581         3665 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1224276, whole genome shotgun sequence.
ACCESSION   DASSYW010000581 DASSYW010000000
VERSION     DASSYW010000581.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3665)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3665)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3665
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1224276"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..573)
                     /locus_tag="VFN38_09285"
     CDS             complement(<1..573)
                     /locus_tag="VFN38_09285"
                     /inference="COORDINATES: protein motif:HMM:NF015316.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein transport protein"
                     /protein_id="HET9011994.1"
                     /translation="MTLHRASRYTLALASLAMLALPAAAGAQAFGLNEIGSCALARGF
                     ATTAMPCDDGSSIYWNPGALPSHRGWTVYGGAAAISIKGDFIQDTTFRQWDADLSTAF
                     VPHLFVNYRGAGKLAYGVGVYVPYGLTSQWTDDFPGRFAAKKASLQTIYVQPNLSYQI
                     TPNWSIGGGPVFGHSTVELIQGVDLSQQIAK"
     gene            747..2339
                     /gene="aceB"
                     /locus_tag="VFN38_09290"
     CDS             747..2339
                     /gene="aceB"
                     /locus_tag="VFN38_09290"
                     /EC_number="2.3.3.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR01344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004474 - malate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malate synthase A"
                     /protein_id="HET9011995.1"
                     /translation="MPASRTPTLSIDAPTHPGADVILTAEALDFLGALHRDFDARRRE
                     VVAGRVARRRQLATHPAGAPLDFPAETAPIRAAAWQVAPAPADLDDRRVEITGPVDRK
                     MMINALNSGARVFMADLEDACSPTWSNVIDGQRNLMDAVRGTLALDVGGKAYRQHERA
                     ATLVVRPRGWHLEERHLRFEGRPASASLVDFGLYCFHNARESVERGSGPYFYLPKMEG
                     HLEARLWNDVFVAAQAALGIPRGTIRATVLIETLPAAFEMEEILYELREHAAGLNAGR
                     WDYLFSFIKTFRDRPDKLLPDRAQLTMTVPFMRAYSERLVQVCHRRGAHAIGGMAAFI
                     PSRKDAEVNARAIVRVQEDKERESGMGFDGTWVAHPDLVPVAGAVFDRVLGARPHQKE
                     VRREGVVVTGDQLIDATVPGGQVTEGGVRMNVEVALLYLESWLRGNGAVAIHNLMEDA
                     ATAEISRTQLWQWIRHGAEIDGAGTMTREYFQRVRAEELARLQGQADAVSRITDAAAL
                     LDALVLGDFEEFLTVVGYQVLE"
     gene            2336..2830
                     /locus_tag="VFN38_09295"
     CDS             2336..2830
                     /locus_tag="VFN38_09295"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HET9011996.1"
                     /translation="MSDGSFYITELRGLVEKESARLLGAPPDAVERRPTKGGWSAKEV
                     LGHLIDSATVNHQRFVRAQWQDLVFAAYAQEDWVQSQQYQSAPWIELVALWREYNRHI
                     ARVMAAIPQEVRLRQHRIHNLHEIAMNPAPKDEPATLDYLMRDYVDHLQHHLKQIDAR
                     IAGR"
     gene            complement(2913..>3665)
                     /locus_tag="VFN38_09300"
     CDS             complement(2913..>3665)
                     /locus_tag="VFN38_09300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9011997.1"
                     /translation="LSHEAPSRELGAAAAEGLDLSRGGGALRAEATRIGDGRDITGTF
                     AVLLEQQRPSGLPSATRSAVLGGFHTTLRQRDDDVRYEERLAFLSETGRTRDGAYVRQ
                     RVALIIGTAARTRPLTTVRLSYGSIGGGDGSATERFVVGGFDSPLVDSLYDARRVEAP
                     AYPLASATGSTFSAYRAGIPLAPVELFYSGVSTDSFRHPLRSFGAELRQRLPAIAALG
                     TPAVDVLTGVARAVDEPVKGAWRYYVTLAIRP"
BASE COUNT          567 a         1218 c         1331 g          549 t
ORIGIN      
        1 cttcgcgatt tgctgcgaga ggtccactcc ctggatcagc tcgaccgtcg agtggccgaa
       61 gacgggacca ccgccgatgg accagttggg cgtgatctgg tagctgaggt tgggctggac
      121 gtagatcgtc tggagcgagg ccttcttcgc ggcgaaccgt ccgggaaagt cgtcggtcca
      181 ctgggaggtg agcccgtagg ggacgtatac cccgactccg taggccagct tgccggcgcc
      241 ccgatagttg acgaagaggt gcggcacgaa cgccgtggac aggtcggcgt cccactggcg
      301 gaaggtcgtg tcctgaatga agtcgccctt gatggagatg gcggcggcgc cgccatagac
      361 cgtccagccg cgatggctgg gcagcgcgcc cgggttccag tagatgctcg agccgtcgtc
      421 gcacggcatg gccgtggtgg cgaagccgcg agcgagggcg cacgagccga tctcattgag
      481 cccgaatgcc tgcgcgccgg ccgcggccgg gagcgcgagc atggcgagcg atgccagcgc
      541 gagggtgtac cgtgaggcac ggtgaagcgt catctccatc ctcctgtggg gcgtccgggg
      601 gaagggccgg acgaacaagt gccgggtgca accgcggcgg ttcagtgtgt ggacgtcgag
      661 tccggtctga ctggtccggc agggcgctaa tataggatgc gtggcggcac tcgtcgctac
      721 cccccttcgc atccatttcg tccatcatgc ccgcgtcgcg cacgccaacc ctctcaatcg
      781 acgcaccgac gcatcccggc gcggacgtga ttctcaccgc ggaggcgctg gatttcctgg
      841 gcgcgctgca ccgcgacttc gacgcgcgcc ggcgcgaagt cgtggcgggt cgagtggcgc
      901 gccgacggca gctcgccacg catcccgccg gcgcgccgct cgactttccc gcggagacgg
      961 caccgatccg cgcggccgcg tggcaggtcg cgcctgcgcc cgcggacctg gacgaccgcc
     1021 gcgtcgagat caccggtccg gtggaccgga agatgatgat caacgccctg aactcggggg
     1081 cgcgcgtctt catggccgat ctcgaggacg cctgctcccc cacctggtcc aacgtcatcg
     1141 acggccagcg caacctgatg gacgcggtgc gcggcacgct cgcgctcgac gtcggcggca
     1201 aggcgtaccg ccagcacgag cgcgcggcga cgctcgtcgt acggccgcgc ggctggcatc
     1261 tcgaggagcg gcacctgcgt ttcgagggcc ggccggcctc ggcgagcctc gtggacttcg
     1321 ggctgtactg cttccacaac gcgcgggagt cggtcgagcg cggctcgggg ccctacttct
     1381 acctgcccaa gatggaaggg cacctcgagg cccggctgtg gaacgacgtc ttcgtcgccg
     1441 cgcaggccgc gctcggcatt ccccgcggga cgatccgcgc caccgtgctc atcgagacgc
     1501 tgccggcggc gttcgagatg gaggaaatcc tgtacgagct gcgcgagcac gccgccgggc
     1561 tcaacgcggg gcgctgggat tatctgttca gcttcatcaa gacctttcgc gaccgtcccg
     1621 acaagctgct ccccgatcga gcgcagctga cgatgacggt gccgttcatg cgtgcctatt
     1681 ccgagcggct cgtgcaggtc tgccatcggc gcggcgcgca cgcgatcggc gggatggcgg
     1741 cgttcattcc gagccggaag gacgccgagg tgaacgcgcg tgcgatcgtg cgcgtgcagg
     1801 aggacaagga gcgggaaagc ggcatggggt tcgacggcac gtgggtggcg catcccgatc
     1861 tggtgccggt cgcgggcgct gtgttcgatc gcgtgctcgg cgcgcgcccg caccagaagg
     1921 aggttcggcg ggagggcgtg gtcgtgaccg gtgatcagct gatcgacgcg acggtgccgg
     1981 gtggccaggt caccgagggc ggcgtgcgca tgaacgtcga ggtcgcgctg ctgtacctcg
     2041 aatcgtggtt gcgcggcaac ggcgcggtgg ccatccacaa cctgatggag gacgcggcga
     2101 cggcggagat ctcacgcacg cagctctggc aatggatccg gcacggcgcg gagatcgacg
     2161 gcgcggggac gatgacccgt gaatactttc agcgtgtgcg cgccgaggag ctggcgcggc
     2221 tgcagggtca ggccgatgcg gtgagccgca tcaccgacgc cgcggcgctg ctggacgcac
     2281 tcgttctcgg cgacttcgag gaatttctca ccgtagtggg ctaccaggta ctggaatgag
     2341 cgacggaagc ttttatatca ccgaactgcg cggcctcgtg gagaaggaat cggcgcgcct
     2401 gctcggcgca ccgcccgacg ccgtggagcg acgaccgacg aagggcggct ggtcggcgaa
     2461 ggaagtgctc ggccatctca tcgattccgc gaccgtgaac caccagcggt tcgtgcgggc
     2521 acagtggcag gatctcgtgt tcgcggcgta cgcgcaggag gactgggtcc agtcgcagca
     2581 gtatcagtcg gcgccgtgga tcgagctcgt ggcgctgtgg cgcgagtaca accggcacat
     2641 cgcgcgggtg atggcggcca ttccgcagga ggtgcgactc cggcagcacc ggatccacaa
     2701 cctccacgag atcgccatga atccggcacc gaaggacgag ccggcgacgc tcgactacct
     2761 gatgcgcgac tacgtcgatc acctgcagca ccacctgaag cagatcgacg cgcggatcgc
     2821 ggggcgttga actaccgtga ggcggtgagg cggtgaggcg atgaatccgt gcatggcgcg
     2881 tcacggcttc accgcctcac ggtctcaccg cctcacggcc gtatcgccag cgtcacgtag
     2941 taccgccacg cgcccttcac cggctcgtcc accgcgcgcg cgacgcccgt gaggacgtcc
     3001 actgccgggg tgccgagcgc cgcgatcgcg gggagccgct gtcgcagctc cgcgccgaag
     3061 cttcgcagcg ggtgccggaa ggagtcggtg ctgactccgg agtagaacag ctccaccggc
     3121 gcgagcggga ttccggcgcg gtaggcgctg aaggtggagc cggtcgcgct cgcgagcgga
     3181 taggccggcg cctcgacgcg acgcgcgtcg tagagcgaat cgacgagcgg cgaatcgaac
     3241 ccgcccacga cgaaccgttc ggtcgcgctg ccgtcgcccc caccgatgct gccgtaggac
     3301 aggcgcaccg tggtgagcgg ccgggtgcga gccgcggtgc cgatgatgag cgcgacgcgc
     3361 tgccgcacgt acgcgccgtc gcgggttcgt cccgtctcgc tgaggaacgc gagccgctcc
     3421 tcgtagcgca cgtcgtcgtc gcgctggcgc agcgtcgtgt ggaagccgcc cagcaccgcg
     3481 ctccgcgtcg cgctcggcaa tccggaaggt cgctgctgct cgagcagcac ggcgaaggtc
     3541 cccgtgatat cgcgcccgtc gccgattcgc gtcgcctcgg cccggagcgc tccgccgccg
     3601 cgcgacaggt cgagcccttc ggcggccgct gcgcccagct cgcgcgacgg cgcctcgtgc
     3661 gacag
//
LOCUS       DASSYW010000582         2462 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1513962, whole genome shotgun sequence.
ACCESSION   DASSYW010000582 DASSYW010000000
VERSION     DASSYW010000582.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2462)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2462)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2462
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1513962"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1791)
                     /locus_tag="VFN38_09305"
     CDS             complement(<1..1791)
                     /locus_tag="VFN38_09305"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HET9011998.1"
                     /translation="MALSLPQSTAQTEPASPPRRRSGDRRGRFFDNTKLILLGIVALV
                     GALAGLLALASRSASLAPDFLAEFVLYALSATDLTILVALVFVLARNIVKLVVERRRA
                     LPFARFRAKLVAALLGMTFIPAVLVLIVGSELIRNSVDRWFNAPMEQVLTSAQGIAAD
                     YYQEQQRVVSSFSLRLARRLAPLDVAAADPGVVQTAVQSDEPPDHVELVEVFSVAPAG
                     AGAPAIRSVARVQAEGLPAGTDASSAALAERAASSGAEAQTVDRLASGAEFIRSATPI
                     RASAQGPVRGVVIASHYLPRDFVDRARGMTSAFESYQQLRVLKGPVTRVYVSFFLMLT
                     LMILVGATWMGLYMAKRITRPVQLLATAAHEIGAGRFDYRVEIQSHDEFGSLAEAFNV
                     MAGDLATSREQLERSSVALERRHHDVESRRRYVETVLERIASGVVSVDAAGRIRTWNS
                     AARRLLGIDSDVSGQRAADVFGAPGLSPLGALLAESTTARDTRPQDVSITRDGRELHL
                     AVVLSPLRREDGSHDGVVVVFDDISPLIRAQKVAAWREVARRLAHEIKNPLTPIQLSA
                     ERLRRHFGQAPDATRALVEECASTIIAEVES"
     gene            complement(1793..2251)
                     /gene="nrdR"
                     /locus_tag="VFN38_09310"
     CDS             complement(1793..2251)
                     /gene="nrdR"
                     /locus_tag="VFN38_09310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016290273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0140110 - transcription regulator activity
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator NrdR"
                     /protein_id="HET9011999.1"
                     /translation="MKCPFCGHLGDKVVDSRESKEGEAIRRRRECLDCGRRFTSYERI
                     DEIAYMVIKKDGTRERFERQKLIAGLLKACEKRPVSIAAIEAVADKAEALLQERPDKE
                     IGTEEVGALVMDELKRLDKVAYVRFASVYRHFRDIGEFMSELKDLLATKE"
     gene            complement(2248..>2462)
                     /locus_tag="VFN38_09315"
     CDS             complement(2248..>2462)
                     /locus_tag="VFN38_09315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012000.1"
                     /translation="SYHEAYRFGMTTFFGASNSNAIAAAIVVHAISFVPVILLGLVFM
                     AQDGLSIGRLKEMAQSAPQEGVATNQ"
BASE COUNT          387 a          887 c          823 g          365 t
ORIGIN      
        1 cgactccact tcggcgatga tcgtgctcgc gcattcctcc accagggcgc gcgtggcgtc
       61 cggcgcctgg ccgaagtggc gccgcagccg ctcggccgaa agctggatcg gcgtgagcgg
      121 gttcttgatc tcgtgcgcca ggcggcgcgc cacctcgcgc caggccgcca ccttctgcgc
      181 gcgaatgagc ggggagatgt cgtcgaagac caccacgacg ccgtcgtggc tgccgtcctc
      241 gcgccgcagc ggcgacagca ccaccgccag gtgcagctcg cggccgtcgc gtgtgatgga
      301 gacgtcctgt ggccgtgtgt cgcgcgcggt cgtactctcc gccagcagcg cgcccaacgg
      361 gctgaggccc ggcgcgccaa agacatccgc cgctcgctgt cccgacacgt cggagtcgat
      421 gcccagcaat cggcgtgccg ctgagttcca cgtacggatg cggccggccg cgtccaccga
      481 cactacgccg ctcgcgatcc gttcgagcac cgtctcgaca tagcggcggc ggctctccac
      541 gtcgtggtgc cggcgctcga gcgccaccga cgagcgctcc aactgttcgc ggctggtcgc
      601 caggtcgccg gccatgacgt tgaacgcctc ggcgagcgag ccgaactcgt cgtggctctg
      661 gatctcgacc cggtagtcga accggccggc accgatttcg tgcgcggcgg tggcgagcag
      721 ctgcaccggg cgggtgatgc gcttcgccat gtacagcccc atccacgtgg caccgacgag
      781 gatcatcaac gtcagcatca ggaagaacga cacgtagacg cgcgtgacgg gacccttgag
      841 aacacggagc tgctggtagc tctcgaaggc gctcgtcatg ccgcgggcgc gatcgacgaa
      901 atcgcgcggc agatagtggc tggcgatcac cacgccgcgc accggcccct gcgcgctcgc
      961 gcggatcggc gtggccgagc ggatgaactc cgcgccgctc gccagtcgat cgaccgtctg
     1021 cgcctcggca cccgacgacg cggcacgttc cgccagcgcc gcggagctcg cgtccgtgcc
     1081 cgccgggagc ccctcggcct gcacgcgcgc caccgaccgg atcgcgggcg cgccggcgcc
     1141 cgccggggcc acgctgaaca cttcgaccag ctccacgtga tccggcggct cgtccgattg
     1201 caccgcggtc tgcacgacac ccggatcggc ggccgccacg tcgagcggcg cgagccggcg
     1261 cgccagccgc agcgagaacg acgagacgac gcgctgctgc tcctggtagt agtccgcggc
     1321 aatcccttgc gccgacgtca gcacctgctc catcggcgcg ttgaaccagc ggtccacgct
     1381 gttgcgaatc agctcgctgc cgacgatgag cacgaggacg gcggggatga acgtcatccc
     1441 gagcagcgcc gccacgagct tggcgcggaa ccgcgcgaac ggcagcgcgc gccgccgttc
     1501 caccacgagc ttgacgatgt tgcgcgccag aacgaagacg agcgccacca gaatggtgag
     1561 gtccgtcgcc gacagcgcgt agaggacgaa ctcggcgagg aagtcgggcg ccagcgaggc
     1621 cgagcggctg gccagggcca gcaggccggc gagcgcgccg accaacgcga cgatgccgag
     1681 cagaatcagc ttcgtgttgt cgaagaagcg gccccggcgg tcgcctgacc ggcgccgcgg
     1741 cggcgaagcc ggttcagtct gcgcggtcga ctgcggcagg gagagtgcca cgctactcct
     1801 tggtggcgag caggtccttc agctcgctca tgaactcccc gatgtcgcgg aagtgacggt
     1861 agacggacgc gaagcggaca tacgccacct tgtcgagccg cttcaactcg tccatcacga
     1921 gcgcacccac ttcctcggtg ccgatctcct tgtcgggacg ctcctgcagc agcgcctcgg
     1981 ccttgtcggc cacggcttcg atcgccgcga tgctcaccgg gcgcttctcg cacgccttga
     2041 gcaggccggc aatcagcttc tgccgctcga agcgctcgcg cgtgccgtcc ttcttgatca
     2101 ccatgtaggc gatctcgtcg atgcgctcgt agctcgtgaa ccgccggccg cagtcgaggc
     2161 attcacggcg gcggcggatc gcctcgcctt ccttgctctc gcgggagtcc acgaccttgt
     2221 cgccaagatg gccgcagaat gggcacttca ttggttcgtc gcgactcctt cctgaggggc
     2281 cgactgggcc atttccttca ggcgcccgat gctcaggccg tcctgcgcca tgaagaccag
     2341 ccccagcagg atcaccggca cgaacgagat cgcgtgcacg acgatcgccg ccgcgatggc
     2401 attgctgttc gacgccccga agaacgtggt catcccgaac cggtaggcct cgtggtagct
     2461 gc
//
LOCUS       DASSYW010000583         2079 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_608828, whole genome shotgun sequence.
ACCESSION   DASSYW010000583 DASSYW010000000
VERSION     DASSYW010000583.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2079)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2079)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2079
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_608828"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2016
                     /locus_tag="VFN38_09320"
     CDS             <1..2016
                     /locus_tag="VFN38_09320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HET9012001.1"
                     /translation="ERVFDTSRLTTAERWELVVTSAKEVGPSLFYSLLIITVSFIPVF
                     TLEGQEGRLFRPLALTKTFAMAAASLLSITLVPVLMGLFIRGTIRREDASPINRGMIR
                     FYRPVLRWALAHRGPVIVGAAVVLILTIIPYAKVGSEFMPPLDEGTILYMPTTLPGIS
                     VARARELLRVQDSIIKSFPEVASVFGKAGRATTATDPAGLDMIETTVALNPKSEWRAG
                     MTSDRLVAEMDAAVRMPGVTNAWTMPISGRIDMLATGIRTPVGVKLFGPDLATLERLG
                     REVENAVRSVRGTRSVFAERAMSGYYLDITIDRAAAARHGVNVGDVQSVIATAIGGMT
                     ITQTVEGRERYGVRVRYPQELRDTPERLAAVLVPTSHSIAGGGRPPAAGGAMPPGAAA
                     PSAMTGGRTTQVPLGQLARIEQVAGPMVVRTEGAIPTAWVYIDVVDRDIGTYVADARQ
                     MVERMVALPPGYTMAWSGQFEYMERAKRKMQLVIPATLAIVFLLLYFNFRSTTETLIV
                     MLSVPFTLVGGIWSLWALDYQWSVAVTIGFIALAGVAAETGVVMLVYLDHAWNDRVAS
                     GRRLTGADLHDAIMHGAVERVRPKMMTVASTMVGLLPILWGTGTGASVMKRIAVPMIG
                     GMVSSTILTLVVIPAVYSLWRERSLAEESRWDSTAARNSLYRIGLPM"
BASE COUNT          301 a          700 c          761 g          317 t
ORIGIN      
        1 gagcgcgtgt tcgacacctc gcgcctcacg acggcggagc gatgggagct cgtcgtcacc
       61 tcggcgaagg aggtgggccc gtcgctcttc tactcgctgc tcatcatcac cgtcagcttc
      121 atccccgtct tcaccctgga agggcaggag ggccggctgt tccgccccct cgcgctcacg
      181 aagaccttcg cgatggcggc ggcgagccta ctgtccatca ccctcgtgcc cgtgctcatg
      241 gggctgttca tccgcggcac gatccgccgc gaggacgcca gccccatcaa ccgcggcatg
      301 atccgcttct accgcccggt gctgcgctgg gcgctggccc atcgcgggcc ggtgatcgtg
      361 ggcgccgcgg tggtgctcat cctcacgatc atcccctacg cgaaggtggg gagcgaattc
      421 atgcccccgc tggacgaagg gacgatcctg tacatgccga cgacgctgcc ggggatcagc
      481 gtcgcccgcg cgcgcgagct gctgcgcgtg caggactcca tcatcaagtc cttccccgaa
      541 gtcgcgagcg tgttcggcaa ggctggccgc gcgaccacgg ccaccgatcc ggcggggctg
      601 gacatgatcg agacgacggt ggcgctgaac ccgaagagcg agtggcgcgc cgggatgacc
      661 tcggaccggc tcgtggccga gatggatgcg gcggtgcgga tgcccggggt gacgaacgcg
      721 tggacgatgc cgatcagcgg acggatcgac atgctcgcga ccggcatccg gaccccggtg
      781 ggcgtgaagc tcttcgggcc cgacctcgcg acgctcgagc gcctcggtcg cgaggtggag
      841 aacgcggtcc ggtcggtgcg cggcacgcga tcggtgttcg ccgagcgcgc catgagcggc
      901 tactacctgg acatcacgat cgaccgggcg gcggcggcgc gccacggcgt gaacgtcggc
      961 gacgtgcaga gcgtgatcgc cacggccatc ggcggcatga ccatcaccca gacggtggaa
     1021 gggcgcgagc gctacggggt gcgggtgcgc tatccgcagg agctgcgcga caccccggag
     1081 cgcctggcgg cggtgctcgt ccccacgagc cacagcatcg cgggcggggg gcggccgccg
     1141 gccgccgggg gcgcgatgcc tcccggggcg gcggcgcctt cagccatgac agggggccgc
     1201 acgacccagg tgcccctcgg ccagctcgcg cgcatcgagc aggtggcggg tccgatggtg
     1261 gtgcgcacgg agggcgcgat ccccaccgcg tgggtgtaca tcgacgtcgt ggaccgggac
     1321 atcgggacgt acgtggccga tgcgcggcag atggtggagc ggatggtggc gctcccgccc
     1381 ggatacacga tggcgtggag cggccagttc gagtacatgg aacgcgcgaa gcggaagatg
     1441 cagctcgtca tccccgccac cctcgcgatc gtgttcctgc tgctgtattt caacttccgc
     1501 agcaccacgg agacgctgat cgtgatgctg tcggtgccgt tcaccctcgt cggcggcatc
     1561 tggtcgctgt gggcgctgga ctaccagtgg tcggtggccg tgacgatcgg cttcatcgcg
     1621 ctcgccggcg tggcggccga gaccggcgtc gtgatgctgg tgtacctgga ccacgcctgg
     1681 aacgaccgcg tcgcatcggg caggcgcctc accggcgccg acctgcacga cgccatcatg
     1741 cacggcgcgg tggagcgggt gcggccgaag atgatgacgg tggcatcgac gatggtgggg
     1801 ctgctcccga tcctctgggg cacgggcacc ggggcgagcg tgatgaagcg gatcgccgtg
     1861 ccgatgatcg gcgggatggt gagcagcacc atcctcaccc tcgtcgtgat ccccgccgtc
     1921 tactcgctct ggcgcgagcg ctcgctcgcc gaggagagca ggtgggactc caccgcggcg
     1981 aggaattcct tgtaccgcat cggcttgccg atgtagccgt cgcagccggc ggcgcggatg
     2041 cgctcctcgt cgcccttcat ggcgagcgcg gtgagcgcg
//
LOCUS       DASSYW010000584         3975 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_952037, whole genome shotgun sequence.
ACCESSION   DASSYW010000584 DASSYW010000000
VERSION     DASSYW010000584.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3975)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3975)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3975
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_952037"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            185..619
                     /locus_tag="VFN38_09325"
     CDS             185..619
                     /locus_tag="VFN38_09325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012002.1"
                     /translation="MRDLIDLADERRTSRWASTTPHVTRILLVTAGLSVTGALLGGLA
                     ATLALVAIVTTTAFASHTLGTITSDMLLVAAVDGAAFGFFLGPIVAWLALRRVPLGVA
                     LIASTAGTVVGAIVGASVPFLGPILGAVAGFVGTALWLRTRG"
     gene            626..1132
                     /locus_tag="VFN38_09330"
     CDS             626..1132
                     /locus_tag="VFN38_09330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012003.1"
                     /translation="MAFEIDLRSPAPPERVLGAIRENLREWRESKIPHDVRKDGVLRV
                     VGDVEPPRFRMRFDRRWYWGEGGDPLVLAGEVVAAENGGSRVVARCGHPGYLKWVPLV
                     FVPLLAWSLFGRGGVAWAILVTAGVFLALAALGDRSVSRGDRNAAYLAERLQDAVAAA
                     SESSALPR"
     gene            1308..1565
                     /locus_tag="VFN38_09335"
                     /pseudo
     CDS             1308..1565
                     /locus_tag="VFN38_09335"
                     /inference="COORDINATES: protein motif:HMM:TIGR02118.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="EthD family reductase"
     gene            1600..2577
                     /locus_tag="VFN38_09340"
     CDS             1600..2577
                     /locus_tag="VFN38_09340"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HET9012004.1"
                     /translation="MSFRRIARRALTLATGALGLAVVHPASAQTPAREGWVVTPDSAR
                     LHYRIEGAAGDTIIAIHGGPGVDLESIAGDFAPLAHRHVVIFYDQRGTGRSTLPRDTT
                     TLNAAQQVRDLDAVRRFFGLSRVTLVAHSYGPLLAATFAIAHPDVVQRMVFFGPVPPR
                     RGDFWKRFAANVAPRMDSTANAAMREASQQLADSTLDARAACRAYWAVAMRPRLAEPA
                     RTLSLIKSDLCASDPAGIRYGLMTTNRLVMGSYGDWDLRAALASVLAPTLIVHGEQEA
                     IPMDLVTEWTTALPRARLFRVPSAAHFTYAERPELVWPEVERFLADGTH"
     gene            2592..3032
                     /locus_tag="VFN38_09345"
     CDS             2592..3032
                     /locus_tag="VFN38_09345"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HET9012005.1"
                     /translation="MTIKRMDNVGIVVESLDAVIPFFVELGLRLEGRATIEGEWAGRV
                     TGLGNQHVEIAMLVTPDGHSRLELSRFLTPAVVADHRDAPVNALGYLRVMFAVTDIDD
                     TLARLRKHGAQLVGEVVRYQDVYRLCYIRGPEGLLVGLAEELKA"
     gene            3109..3825
                     /locus_tag="VFN38_09350"
     CDS             3109..3825
                     /locus_tag="VFN38_09350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012006.1"
                     /translation="MTTDPDRRSRRDFVLDVGRLATAVAVTASVTPHTAQASVRSASV
                     PRSAGDWDLSWIDRLAGATDRAVFDWPDVGDPSDPTVLEIAERYLDGCTAVYGSRRHE
                     TRVILNIRHRAVPAALDDAAWERFALGAEYGVKDPASGKPAVRNPFWRHAASAVAAAP
                     EPYVLPTIEALLQRGAIVLVCDFALSHLASRLASRANRSADDVHRELRGAFVPGSYAV
                     PSGIFGLARAQNAGCAYMRA"
BASE COUNT          538 a         1375 c         1358 g          704 t
ORIGIN      
        1 ctcgcgcgcg gcgacgtgta cctcgtgtcg gtcggggatg caggccttca agtgggcacg
       61 aagggaccgc cggggagtgg ggtcgtcgcg atgagcgccc gtgcgcgctt cgtaaagctg
      121 tatcagcggc caggcacgac gggcatcagc accggttggt ggtaatggcc aactcgaggt
      181 gctgatgcgt gatctcatcg atctggctga cgagcgcagg acctcgcggt gggcgagcac
      241 cacgccgcac gtcacccgca tcctgctcgt cacggccggt ctcagcgtga cgggcgcgct
      301 cctcggcggg ctcgcggcaa cgctcgcgct cgtcgccatc gtcacgacga cggcattcgc
      361 ctcccatacc ctgggcacga tcacctccga catgctcctg gtagcggccg tcgacggtgc
      421 ggcgttcggc ttcttcctcg gaccgatcgt cgcatggctg gcgctgcgtc gcgttccgct
      481 cggcgtggcg ctgatcgcgt cgaccgcggg taccgtcgtc ggggccatcg tcggggcgtc
      541 ggtgccattc ctcggtccca tcctgggcgc cgtcgcgggg ttcgtgggaa ccgcgctctg
      601 gttgcgcacg cgcggatagc catccgtggc gttcgagatc gacctgcgca gtcctgcgcc
      661 gccggagcga gtgcttggcg ccattcgtga gaatcttcgc gagtggcgcg aatccaagat
      721 tccgcacgac gtacggaagg atggggtgct gcgggtagtt ggcgacgtcg aaccgccgcg
      781 attccgcatg agattcgatc gtcgctggta ctggggcgaa ggaggagatc cgctcgtcct
      841 cgcaggcgag gtggtcgccg ccgagaatgg cgggagccga gttgtcgcgc gatgtgggca
      901 tcccggatat ctcaagtggg tccccctcgt gttcgttccg ttgctggcgt ggagtctgtt
      961 tggtcgtggt ggcgtcgcct gggcgattct cgtcaccgcg ggtgtgtttc tcgccctcgc
     1021 agctctggga gaccggagtg tctcgcgcgg cgatcgcaat gcggcctatc ttgccgagcg
     1081 gttacaggat gcagtggcag ccgcgtcaga gtcctcggcg ctccctcgct gacgcgtcgc
     1141 cgcttcgagg atcgattgga atggcggatg tcccgcgcgt tccgctgctc ggctcgctcc
     1201 gacgcccaac cgcctgattg cagggaaatc gacatacgtg ggtaagcatc gtggccagaa
     1261 tgatcgtgat ctaccggacg ccgaagaatc cttaagcgtt cgatgcgcac tatttcggcg
     1321 tgcatgtgcc gctcgcgaat aagctgccgg gactcttgaa gtacgaggtg agtcgtagcc
     1381 cgatcatgac tcccgcgggt gatgccgagc cgtatctcgt cgggattctc cacttcgacg
     1441 acctggcggc ggtccgtcgt gccttcgcca cccccgaagg acaggcctgc gcggcggatc
     1501 ggcgcgtgct tgcgcccgac gacggcgacg tgcagatgta catcttcgac gccgccgagg
     1561 tgtagctccc tgcgcctcgc tcacccgcga gacacttcca tgtcgttccg ccggatcgct
     1621 cgacgcgcgc tgaccctcgc gacgggcgcg cttggcctgg ccgtcgtgca tcccgccagc
     1681 gcccagacgc ccgcccgtga gggctgggtc gtcactccgg actcggctcg gcttcactac
     1741 cgcatcgaag gcgcggccgg cgatacgatc atcgccatcc acggcggccc cggcgtcgac
     1801 ctcgagagca tcgccggcga cttcgcgccg ctcgcgcacc ggcacgtcgt gatcttctac
     1861 gatcagcgcg gcactggccg ctccaccctg ccgcgcgaca cgacgacgct gaacgccgcg
     1921 caacaggtgc gcgacctcga tgcggtgcgc cggttcttcg ggctgtcgcg cgtgaccctc
     1981 gtcgcgcact cgtacggccc gctcctcgcg gcgacgttcg cgatcgccca cccagacgtc
     2041 gtgcagcgga tggtgttctt cggccccgtg ccgccgcggc gcggcgactt ctggaagcga
     2101 ttcgccgcga acgtcgcgcc gaggatggac agcaccgcca acgccgccat gcgtgaggcg
     2161 tcgcaacagc tcgccgacag caccctggat gcgcgtgcgg cgtgtcgtgc ctactgggcc
     2221 gtcgcgatgc gcccccgcct cgccgagccg gcgcgcaccc tgtcgttgat caagtcggac
     2281 ctgtgcgcgt cggatccggc gggcatccgc tacggtctca tgacgacgaa ccggttggtg
     2341 atgggctcgt acggcgactg ggatctccgt gccgcgctcg cgagcgtgct cgcgcccacg
     2401 ctcatcgtgc acggcgagca ggaggcgatc ccgatggacc tcgtgacgga gtggacgacc
     2461 gcgctcccgc gcgcgcggct gttccgggtg ccgagcgccg cgcattttac gtatgccgag
     2521 cggccggagc tggtgtggcc ggaggtcgag cgtttcctcg ccgacggcac tcactgagtt
     2581 cgacatcgcc aatgactatc aagcggatgg acaacgtcgg catcgtggtg gaatccctcg
     2641 atgccgtcat ccccttcttc gtcgagctgg gcctgaggct cgaggggcgg gccaccatcg
     2701 aaggcgaatg ggccgggcgc gtcacggggc tggggaacca gcatgtggag atcgccatgc
     2761 tggtcacccc ggacggccac agtcggctcg agctgtcccg attcctcacc ccggccgtcg
     2821 tcgccgatca tcgcgacgct cccgtgaacg cgctcggcta cttgcgcgtc atgttcgcgg
     2881 taaccgacat cgacgacacg ctcgccaggc tccgcaagca tggcgcgcag ctcgtcggcg
     2941 aggtcgtccg gtatcaggac gtctatcggc tctgctacat ccgcggcccc gagggcctgc
     3001 tcgtcggcct cgccgaggag ctgaaggcat gagtcgagcg gtggatcccg gtcgccgtcg
     3061 tcgggcacga gtagcatcgg tcactttttc ccttcaccac atcccgtgat gaccaccgac
     3121 cccgatcggc gctcgcgccg cgatttcgtc ctcgacgtcg gccggctggc cacggccgtc
     3181 gccgtgaccg catccgtgac cccccacact gctcaggcat ccgtacgttc cgcctctgtg
     3241 ccgcgctcgg ccggcgactg ggacctgtcg tggatcgacc gactggccgg cgcgacggat
     3301 cgcgcggtgt tcgactggcc cgacgtcggc gacccgagcg atcccaccgt gctggagatc
     3361 gccgagcggt atctcgacgg ctgcaccgcc gtgtatggtt cgcggcggca cgagacgcgc
     3421 gtcatcctga acatccgcca tcgtgccgtg cccgccgcgc tcgatgacgc ggcgtgggag
     3481 cgtttcgcgc tcggcgcgga gtacggggtg aaggatccgg cctcgggcaa gccggcggtg
     3541 cgcaacccgt tctggcgaca cgctgcctct gcggtggctg ctgcgccgga gccatacgtg
     3601 ctgccgacga tcgaggcgct tctgcagcgc ggtgccatcg tgctcgtctg cgacttcgcg
     3661 ctaagccatc tggcatcgcg cctcgcgtcc agggcaaacc gttcggcgga cgacgtgcat
     3721 cgcgagctgc gcggcgcatt cgtgcccggc tcgtacgctg tgccctccgg catcttcggg
     3781 ctcgcgcggg cgcagaatgc ggggtgcgcg tacatgcggg cctgagcgtg acgtacgcgc
     3841 acacccagcg cagtcccatg ctgctcctgc tgctcggcgg cgccggcgcc ggcacgctag
     3901 cgtcgctcgc gtttcccggc gcgcgagtga tcccgttcgg cgcacggctc acgatcgccg
     3961 ccggcgcggc agcga
//
LOCUS       DASSYW010000585         2356 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_480537, whole genome shotgun sequence.
ACCESSION   DASSYW010000585 DASSYW010000000
VERSION     DASSYW010000585.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2356)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2356)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2356
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_480537"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..707
                     /locus_tag="VFN38_09355"
     CDS             <1..707
                     /locus_tag="VFN38_09355"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: protein motif:HMM:TIGR00121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004077 - biotin-[acetyl-CoA-carboxylase]
                     ligase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="biotin--[acetyl-CoA-carboxylase] ligase"
                     /protein_id="HET9012007.1"
                     /translation="RLGVPAALLFDQVGSTLDVAHRIAPGAASGTLVLADEQTAGRGR
                     HGRRWTSAPGAGIWLTLVERPTDVRALDVLSLRCGLYAAEALDAMAAARIGVKWPNDL
                     YVGDRKLAGILIETRWRGTAPDWVAIGFGLNVVTPDLSTGIGLRSGVARVDVLALLVP
                     ALRRAAAASGHLTDHELERWSTRDIAVGRVLDAPGPGRASGISRQGELLVADAAGTMV
                     PHRSGSLTFAESPACS"
     gene            698..1486
                     /locus_tag="VFN38_09360"
     CDS             698..1486
                     /locus_tag="VFN38_09360"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: protein motif:HMM:NF009855.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III pantothenate kinase"
                     /protein_id="HET9012008.1"
                     /translation="MLLTFDVGNSETTLGLFDGDTLRGHWRLTTDVPRTSDELGVLLR
                     GFLGGVEVALDAVHGVAIGSVVPRVTQPLADACRDWLAVRRVEVVDATSPLPITLAVD
                     EPRTVGADRIINTLVASRRYGRDAIVVDLGTATTFDCITKDAVFLGGVIAPGVRTSAE
                     TLFRRTSKLPATELVAPAHAIGRNTEDCIRAGVMFGAAESIDGVVRRIIAEWPGGERP
                     MVIATGGLAETFAPLCTCFDAVDPYLTLRGLVLAFDLLGTPGAK"
     gene            1675..1959
                     /locus_tag="VFN38_09365"
     CDS             1675..1959
                     /locus_tag="VFN38_09365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005858788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HET9012009.1"
                     /translation="MKISPLADRVVVKAAEDTEQMRGGLYIPDTAKEKPQQGEIIAAG
                     PGKYEDGKLVPMSVKVGDKVLYGKYSGTEITLDNEQYLILRESDVLAVVS"
     gene            1986..>2356
                     /locus_tag="VFN38_09370"
     CDS             1986..>2356
                     /locus_tag="VFN38_09370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TCP-1/cpn60 chaperonin family protein"
                     /protein_id="HET9012010.1"
                     /translation="MASKELHFNVDARAALKRGVDQLAEAVKVTLGPKGRNVVIDKKF
                     GAPTVTKDGVTVAKEIELSDPLENMGAQMVKEVATKTSDNAGDGTTTATVLAQAIFRE
                     GLKNVTAGSNPMAIKRGIDKAV"
BASE COUNT          359 a          794 c          845 g          358 t
ORIGIN      
        1 tgcggcttgg cgtgcccgcc gcgctgctgt tcgatcaggt gggctcgacg ctcgacgtcg
       61 cgcatcgcat cgcgccgggc gcggcgtcgg gcacgctggt gctcgccgac gagcagaccg
      121 cagggcgcgg gcgccatggg cggcgctgga cctcggcgcc gggtgcgggg atctggctca
      181 ccctcgtcga gcgtccaacg gacgtgcgcg cgctcgacgt gctctcgctc cgctgtggcc
      241 tgtacgccgc cgaggcgctc gacgcgatgg cggcggcgcg cataggcgtg aagtggccga
      301 acgatctgta cgtgggcgat cgcaagctcg ccggcatcct gatcgagacg cggtggcgcg
      361 gcaccgcccc cgactgggtg gcgatcgggt tcgggctcaa cgtcgtcacc cccgacctgt
      421 cgactggcat cggcctgcga tcgggcgtcg cgcgcgtcga cgtcctcgcg ctgctcgtgc
      481 cggcgctccg ccgcgcggcg gcggcgagtg gccatctcac cgaccatgag ctcgagcggt
      541 ggagcacccg cgacatcgcg gtcggccgcg tcctcgatgc gcccggcccc ggccgcgcgt
      601 cgggcatctc gcgccagggc gagctgctcg tcgccgacgc cgcgggcacg atggttccgc
      661 accgctccgg ctccctcacc ttcgccgaat cccccgcatg ctcctgacct tcgacgtcgg
      721 caactcggaa acgacgctgg gcctgttcga cggcgacacc ctgcgcggac attggcggct
      781 gacgacggac gtgccgcgca cgtcggacga gctgggcgtg ctcctgcgcg gctttctcgg
      841 cggcgtggag gtggcgctgg acgccgtgca cggcgtcgcc atcggctccg tggtgccgag
      901 ggtgacgcag cccctcgccg acgcgtgccg cgactggctc gcggtgcggc gcgtcgaggt
      961 ggtggatgcg acgtcgccgc tcccgatcac cctggcggtg gacgagccgc ggacggtggg
     1021 cgccgaccgc atcatcaaca ccctcgtcgc gagccggcgc tacgggcgcg atgccatcgt
     1081 ggtggacctc ggcacggcga cgaccttcga ttgcatcacc aaggacgccg tcttcctggg
     1141 cggggtgatc gcgccgggcg tgcgcacctc ggccgagacg ctcttccggc ggacctccaa
     1201 gctgccggcc accgagctgg tggcgccggc gcatgcgatc ggccgcaaca ccgaggactg
     1261 catccgggcc ggggtgatgt tcggcgcggc ggagtcgatc gacggtgtcg tgcgccggat
     1321 catcgccgag tggcccggtg gggagcggcc gatggtgatc gccaccggcg ggctggcgga
     1381 gaccttcgcg ccgctctgca cctgcttcga tgcggtggac ccgtacctga ccctgcgggg
     1441 gctggtgctg gcgttcgacc tgctggggac gcctggcgcc aaatagttgg cgctgaacga
     1501 tttacggcgc gcgtacgcat ttccgtccgg cccacttgcc tcgcgggagg ggcgtgcata
     1561 tcatccctcc tgttagcact cgaccgtgat gagtgctaag acaagtcgac attctttttc
     1621 accgtatttc gaagcggagg cgcattacct atggccacca agagcgcggc cggcgtgaag
     1681 atctcgccgc tggctgaccg ggttgtcgtg aaggcagccg aggacaccga gcagatgcgc
     1741 ggtggactct acatcccgga cacggcgaag gagaagccgc agcagggaga gatcatcgcc
     1801 gcgggaccgg gcaagtacga ggacggcaag ctcgtcccga tgtccgtgaa ggtcggcgac
     1861 aaggttctct acgggaagta cagcggcacc gagatcacgc tcgacaacga gcagtacctg
     1921 atcctccgcg agtccgatgt gctcgcggtg gtctcgtaat cactgccaac gcatagaggc
     1981 ataccatggc tagcaaggaa ctgcacttca acgtcgatgc gcgcgcagcc ctgaagcgcg
     2041 gcgtcgatca gctcgccgag gcggtgaagg tcaccctcgg gccgaagggc cggaacgtcg
     2101 tgatcgacaa gaagttcggc gccccgaccg tcaccaagga cggcgtgacg gtggcgaagg
     2161 agatcgagct gtcggatccg ctcgagaaca tgggcgcgca gatggtgaag gaagtcgcga
     2221 ccaagacgtc ggacaacgcg ggcgacggca cgacgaccgc cacggtgctc gcccaggcga
     2281 tcttccgtga agggctcaag aacgtcaccg ccggctccaa cccgatggcg atcaagcgcg
     2341 gcatcgacaa ggccgt
//
LOCUS       DASSYW010000586         4610 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_808041, whole genome shotgun sequence.
ACCESSION   DASSYW010000586 DASSYW010000000
VERSION     DASSYW010000586.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4610)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4610)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4610
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_808041"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(138..1409)
                     /locus_tag="VFN38_09375"
     CDS             complement(138..1409)
                     /locus_tag="VFN38_09375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HET9012011.1"
                     /translation="MRLLTPFSMAFEGVGIALDALRSNKVRAGLTIMGVALGVFVVVA
                     MSSVVRGINESFRRDVEAAGPTSFFVYRRPIGGFNSCDGTDETCPERRNPAITLDEVA
                     AIERLPSIRAVTAHIGTGAKFKYKDKLSRAGMEVYTPNWTEVDGGDIYPGRSFTYAEN
                     ATGAKVVLVNDKLAEQLFGDSDPIDKTIMIDDVQFRVIGFYHYTSSPMGTPTSAGGGD
                     SPKAIVPFESARRHLNLWMRGNNLIVKPHTGVSTQEAVDDVIAALRAHRGLRARAPNN
                     FDIVTQDRLWMIYNKLFGTFFVVGLALSSVGLLVGGIGVIAIMMISVTERTREIGVRK
                     ALGATKWTILWQFLVEAVTLTGIGASVGLALGILVAIGVRTAWPSIPASTSWGSVAAA
                     LGISAVTGVLFGMLPAVRAARLDPVAALRYE"
     gene            complement(1413..2651)
                     /locus_tag="VFN38_09380"
     CDS             complement(1413..2651)
                     /locus_tag="VFN38_09380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HET9012012.1"
                     /translation="MPFHEAVRLALQQIRVQKLKSFFTLLGVMIGVMFLIAVVSIVTG
                     MSKYVEEDFAGRMLGANTFTLRRYPWFGDNTTEAEWREWQKRPRVYQSDVALVRSALP
                     AGTRYAVESQETVWATSLYSRPRQVQAHAVEGDYFTIKKYDLSSGRIFTQQEAELGSP
                     VVVIGDEVAKFFFQGLNPIGRELRMGGLPYQVIGVIEHQGNLFGMSLDKTAFAPFNSP
                     LHRLTNPRGDIDGLMVQAPNDLMMNEAMETTREVLRGHRRLRPSVADNFVMETSASAL
                     ASFEKIKGVMTAAGTALPAIGLVVGGMVIMNIMLVAVAERTREIGIRKSLGARRKDIL
                     RQFLVESATLSTLGAVLGIALGILSAKIISWNTPLPAAVAPWSLVVATLLGTGVGILS
                     GMYPARKAARLDPIDALRSE"
     gene            complement(2777..4000)
                     /locus_tag="VFN38_09385"
     CDS             complement(2777..4000)
                     /locus_tag="VFN38_09385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HET9012013.1"
                     /translation="MSVLQQRIHGMGEGVTIALDSIRANKVRAGLTILGIAVGVFVVV
                     VISAAIHGINASVAKDFESTGPTTFFVSRFPITFEACDGTEDTCKWFRNPRLTLGDVE
                     ALEQLSSVRTAGARLDTSRPAAYKDKRAAGVQISGFTGNWQQIDGGGDIYPGRNFTAA
                     EAAGGDRVVVVNDQLATQLFGESDPMDKSIELGGIPFKVLGVYHYQASFLSGGNKPRA
                     IIPIEAARKHLKADFADIGIAVIPAATATRAEAIDEVIAAMRARHGLRPAVDNDFAII
                     TQDQLFDVYNKIFGAFFLVMVVLSAVGLIVGGVGVVAIMMISVTERTREIGVRKALGA
                     TRGTILWQFLVEAVTLTGIGAVIGLVLGTLVSVLIAKTTPIAASVPPLAVVAALLTSA
                     FTGVLFGTLPAAKAA"
     gene            complement(4004..>4610)
                     /locus_tag="VFN38_09390"
     CDS             complement(4004..>4610)
                     /locus_tag="VFN38_09390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HET9012014.1"
                     /translation="VAPHKSPINRYVNAHGVIDAIIVQTPSREGMLSAMETVRQVMRA
                     RHGLRLSQKDDFELETSDSALEFWNKIKSYLVIAGVALPAIGLVVGAIVIMNIMLVAV
                     AERTREIGIRKSLGARRRDIMSQFLVESATLSTVGAAFGVATGFAFAKLIAAVTPLPA
                     AVELWSVFVGVGIGAGVGIVAGAYPASRASRLDPITALRAE"
BASE COUNT          728 a         1532 c         1656 g          694 t
ORIGIN      
        1 ggtgagctcg acgtcgtcgc ggtgcgcggc gatggccagg atgtccacgg attgcatgga
       61 cggggaatag aggggatggc agggtgcgcg ggaggcggtt gggcggttgg gcggtaaccg
      121 cctcaccgcc tcaccgccta ctcgtaccgc agcgccgcca ccggatccag gcgcgcggcg
      181 cgcaccgcgg gcagcatgcc gaaaaggact cccgtcacgg cgctgatgcc gagcgccgcg
      241 gccacgctcc cccacgacgt cgaggccggg atcgacggcc acgcggtccg tacgccgatc
      301 gccaccagaa tgccgagggc gagccccacc gaggcgccga tgccggtgag cgtcaccgcc
      361 tcgacgagga actgccagag gatggtccac ttcgtcgccc cgagcgcctt gcgcacgccg
      421 atctcgcggg tgcgctcggt gacggagatc atcatgatgg cgatcacgcc gatgccgccg
      481 acgaggagcc ccaccgacga cagcgcgagg ccgacgacga agaaggtgcc gaacagcttg
      541 ttgtagatca tccacaaccg atcctgcgtg acgatgtcga agttgttcgg cgcgcgcgcg
      601 cgcaggccgc ggtgcgcgcg cagggcggcg atcacgtcgt ccaccgcctc ctgcgtcgac
      661 acgccggtgt gcggcttcac gatcaggttg ttgccgcgca tccagaggtt gaggtgccgg
      721 cgcgccgact cgaacgggac gatcgccttc ggcgaatcgc cgccgccggc cgacgtcggc
      781 gtgcccatgg ggctcgacgt gtagtggtag aagccgatga ccctgaactg gacgtcgtcg
      841 atcatgatcg tcttgtcgat cggatcggag tcgccgaaca gctgctcggc gagcttgtcg
      901 ttcaccagca cgaccttcgc gccggtcgcg ttctcggcgt aggtgaagct gcggccggga
      961 tagatgtcgc cgccgtccac ctcggtccag ttgggcgtgt acacctccat gccggcgcgc
     1021 gacagcttgt ccttgtactt gaacttcgcg ccggtgccga tgtgcgccgt gacggcccgg
     1081 atggagggga ggcgctcgat ggccgccacc tcgtccagcg tgatggccgg attgcgccgc
     1141 tcggggcagg tctcgtcggt gccgtcgcag ctgttgaagc cgccgatcgg ccgccggtac
     1201 acgaagaacg aggtggggcc ggcggcttcg acgtcgcgcc ggaacgactc gttgatgccg
     1261 cgcacgacgg acgacatcgc cacgacgacg aagacgccga gcgccacgcc catgatcgtg
     1321 aggccggcac gcaccttgtt cgagcgcagc gcgtcgaggg cgatgccgac cccctcgaac
     1381 gccatggaga atggtgtgag cagtcgcatc gcttactccg accgcagggc gtcgatgggg
     1441 tccaggcggg cggccttccg cgccgggtac atccccgaga ggatgccgac gcccgtgccg
     1501 agcagggtcg cgacgacgag ggaccagggg gcgacggccg cgggcagcgg ggtgttccag
     1561 gagatgatct tcgcggagag gatcccgagc gcgatgccaa gcacggcgcc gagggtgctg
     1621 agggtggcgc tctcgacgag gaactggcgc aggatgtcct tgcggcgcgc gccgagcgac
     1681 ttgcggatcc cgatctcgcg ggtccgctcg gcgaccgcga cgagcatgat gttcatgatg
     1741 accatgccgc cgaccaccag cccgatggcg gggagcgcgg tgccggccgc cgtcatcacc
     1801 cccttgatct tctcgaacga ggcgagcgcc gaggccgacg tctccatgac gaagttgtcg
     1861 gcgacgctcg gccgcaggcg acgatggccg cgcagcacct cgcgcgtcgt ctccatcgcc
     1921 tcgttcatca tcaggtcgtt gggggcctgc accatcagcc cgtcgatgtc cccgcgcgga
     1981 ttcgtgagcc ggtgaagggg cgagttgaac ggggcgaagg cggtcttgtc gagcgacatg
     2041 ccgaacaggt tgccctggtg ctcgatcacg ccgatcacct gatagggcag cccgcccatc
     2101 cgcagctcgc gcccgatggg attcagcccc tggaagaaga acttcgccac ctcgtcgccg
     2161 atcacgacga cgggggagcc aagctcggcc tcctgctggg tgaagatccg gccgctcgag
     2221 agatcgtact tcttgatcgt gaagtagtcg ccctccacgg cgtgggcctg gacctggcgg
     2281 ggccgcgaat agaggctggt ggcccagacg gtctcctggc tctccaccgc gtagcgcgtc
     2341 cccgcgggga gggcgctgcg cacgagcgcc acgtccgatt gatagacgcg cggccgcttc
     2401 tgccactcgc gccactccgc ctcggtggtg ttgtcgccga accaggggta ccggcgcagg
     2461 gtgaaggtgt tcgccccgag catgcggccg gcgaagtcct cctcgacgta cttgctcatc
     2521 ccggtgacga tcgagacgac ggcgatgagg aacatcacgc cgatcatgac gccgagcagg
     2581 gtgaagaagc tcttgagctt ctgcacccgg atctgctgga gggcgagccg gacggcctcg
     2641 tggaagggca tgctgagcgt ggctggaggg ggtgttgctc ggcctacggc gggcgcgccg
     2701 ggaaagtgtc aggccaccgg ccgtcgtact cggtgccggc gccttactcg tatcgcagcg
     2761 ccgccaccgg atccagctag gcggccttcg ccgccgggag cgtcccgaac aggacgcccg
     2821 tgaaggcgct cgtgaggagc gcggccacga cggccagggg cggcacgctg gcggcgatgg
     2881 gggtggtctt ggcgatcagc acggagacca gggtgccgag gacgaggccg atcaccgccc
     2941 cgatgccggt gagggtcacc gcctcgacga ggaactgcca gagaatcgtg ccgcgggtgg
     3001 cgccgagcgc cttgcggacg ccgatctccc gggtgcgctc ggtgaccgag atcatcatga
     3061 tcgcgaccac cccgaccccg ccgacgatga gcccgacggc ggacagcacg accatcacga
     3121 ggaagaaggc gccgaagatc ttgttgtaga cgtcgaacag ctggtcctgg gtgatgatgg
     3181 cgaagtcgtt gtccacggcg ggccgcagcc cgtgccgcgc ccgcatcgcc gcgatcacct
     3241 cgtcgatcgc ctcggcgcgc gtggcggtgg ccgcggggat caccgcgatg ccgatgtcgg
     3301 cgaagtccgc cttgaggtgc ttgcgggccg cctcgatggg aatgatggcg cggggcttgt
     3361 tgccccccga caggaagctc gcctggtagt ggtagacgcc cagcaccttg aacgggatcc
     3421 cgcccagctc gatcgacttg tccatcgggt cggactcgcc gaacagctgc gtcgccagct
     3481 ggtcgttcac gaccacgacg cgatcgcccc ccgcggcctc ggcggcggtg aagttgcggc
     3541 cgggatagat gtcgccgccg ccgtcgatct gctgccagtt gccggtgaag ccgctgatct
     3601 ggacgccggc cgcccgcttg tccttgtagg cggcggggcg cgacgtgtcg agccgcgcgc
     3661 ccgccgtccg caccgaggag agctgctcga gggcctcgac gtcgccgagg gtgagccgcg
     3721 ggttgcggaa ccacttgcag gtatcctccg tgccgtcgca cgcctcgaac gtgatgggga
     3781 agcgcgagac gaagaaggtg gtgggtcccg tgctctcgaa gtccttggcc acgctggcgt
     3841 tgatgccgtg gatggccgcc gagatgacga cgacgacgaa cacgccgacg gcgatgccga
     3901 gaatcgtgag gccggcgcgc accttgttgg cgcggatcga gtcgagggcg atggtgaccc
     3961 cctcgcccat gccgtggatg cgctgctgga ggacggacat cggctactcc gcgcgcaggg
     4021 cggtgatggg atcgagccgc gacgcgcggc tcgcgggata cgcgccggcg acgatcccga
     4081 ccccggcgcc gatgccgacc cccacgaaca ccgaccagag ctcgacggcg gcggggagcg
     4141 gggtgacggc ggcgatcagc ttggcgaacg cgaacccggt cgcgacgccg aaggcagcgc
     4201 cgacggtgct gagcgtcgcg ctctcgacga ggaactggct catgatgtcg cggcgccgtg
     4261 ccccgagcga cttgcggatg ccgatctcgc gcgtgcgctc ggccaccgcc accagcatga
     4321 tgttcatgat cacgatcgcg ccgacgacga gcccgatcgc cggcagcgcc acgcccgcga
     4381 tcaccaggta gctcttgatc ttgttccaga actcgagcgc cgaatcggag gtctcgagct
     4441 cgaagtcgtc cttctggctc agacgcagcc cgtggcgcgc gcgcatcacc tggcgcaccg
     4501 tctccatcgc gctgagcatg ccctcgcggc tgggcgtctg cacgatgatg gcgtcgatca
     4561 cgccgtgggc attcacgtag cgattgatcg gcgacttgtg cggcgcgacg
//
LOCUS       DASSYW010000587         2024 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_493118, whole genome shotgun sequence.
ACCESSION   DASSYW010000587 DASSYW010000000
VERSION     DASSYW010000587.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2024)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2024)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2024
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_493118"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..431
                     /locus_tag="VFN38_09395"
     CDS             <1..431
                     /locus_tag="VFN38_09395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HET9012015.1"
                     /translation="HDDALTKRAHDLLERVGLGDRGEHVPSELSGGEQQRVSIARALL
                     LQPELLLADEPTGNLDSRAGALVLRILREISSNEGHTVVMVTHDPSAAATSDRVVFLR
                     DGQIAGEVQGGSTERVAEFFTSLSATVEEVEPTPAGAASP"
     gene            428..>2024
                     /locus_tag="VFN38_09400"
     CDS             428..>2024
                     /locus_tag="VFN38_09400"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HET9012016.1"
                     /translation="MIASFDGIALRQLRTRRLRALLTAFGIVLGVGMVFAVLLLVGTI
                     RHTFDDLISSAWGSTDVVVVPKETGVIPQSALEKVRRVDGVEQAGPMLGGVFTRLDAG
                     GKAVKGRKGQMLVAGYDPGAPAYDFRYLQGRPVRSGAEVVLEQKWADEKNVTVGQSLP
                     VATPTGRVTLLVVGIFRFSSGLSFAGQGLAGMPIAELRALTATPTGFHQIAVRASDRA
                     DSEALRDRIAAAVGTAVEVKTPKALGADLTSELQALNVVLYFFSGVALFVGGFLILNS
                     FNMTVLQRVREIGMLRTLGATRGMIARSVLLEALVVGVIGSLLGLGLGALLCIGLAAL
                     MESIGVPVGDLYLTPAPVIAALVVGLIATAAGAFYPARRAARVPPIQAAQGTLETKRP
                     KRLRRALIGLALLAPGAVYGGTFWMSDSAGNGALAAITGVGATMLMFVGMAVMAPVVI
                     MPLVSALAAPLRRLFPVGGRLASDAARSNPARTAATAVALTIGLSVIVVNSSMSSSFL
                     GTISDQIDQSYARDFTVAPAGSTI"
BASE COUNT          246 a          727 c          747 g          304 t
ORIGIN      
        1 ggcatgacga cgctctcacg aagcgcgcgc acgatctgct cgagcgcgtc gggctcggcg
       61 accgcggcga gcacgtgccg tcggagctgt ccggcggcga gcagcagcgc gtgtcgatcg
      121 cgcgggccct gctgctccag ccggagctgc tgctcgcgga cgagcccacc ggcaacctcg
      181 actcgcgcgc gggcgcgctt gtgctgcgga tcctccgcga gatcagctcg aacgagggcc
      241 acaccgtggt gatggtcacg cacgacccct ccgccgccgc gacctccgac cgcgtcgtgt
      301 tcctccgcga cggccagatc gccggcgagg tgcagggcgg ctcgacggaa cgggtcgcgg
      361 agttcttcac gtccctctcg gccacggtgg aggaggtcga gcccaccccg gccggcgccg
      421 cgtcgccatg atcgcctcct tcgacgggat cgcgctccgg cagctccgga cgcgtcgcct
      481 gcgtgccctg ctcacggcct tcgggatcgt gctgggggtg gggatggtgt tcgccgtgct
      541 gctgctcgtc ggcacgatcc gccacacgtt cgacgacctg atcagctcgg cgtgggggag
      601 caccgacgtg gtcgtcgtgc cgaaggagac cggcgtgatc ccgcagtcgg cgctcgagaa
      661 ggtgcgccgg gtggacggcg tcgagcaggc gggcccgatg ctgggcggcg tgttcacgcg
      721 gctcgacgcg ggcgggaagg ccgtgaaggg gcgcaagggg cagatgctgg tggcgggcta
      781 cgaccccggc gctcccgcat acgacttccg ctacctccag ggccggccgg tgcgcagcgg
      841 cgccgaggtg gtgctggagc agaagtgggc ggacgagaag aacgtgacgg tggggcagtc
      901 gctgccggtt gcgacgccca ccggccgcgt gacgctgctc gtggtgggca tcttccgctt
      961 ctcgagcggg ctgtcgttcg cgggccaggg cctcgcgggg atgcccatcg ccgagctgcg
     1021 ggcgctcacg gccacgccca ccggcttcca tcagatcgcg gtgcgcgcat ccgaccgggc
     1081 cgactccgag gcgctccgcg acaggatcgc cgcggcggtg ggcaccgccg tcgaggtgaa
     1141 gaccccgaag gcgctcggcg ccgacctcac gagcgagctc caggcgctga acgtggtcct
     1201 ctacttcttc tcgggcgtcg cgctgttcgt cggcgggttc ctgatcctca actcgttcaa
     1261 catgaccgtg ctccagcgcg tgcgcgagat cggcatgctg cgcacgctcg gcgcgacgcg
     1321 cgggatgatc gcgcggtcgg tgctcctcga ggcgctcgtg gtcggcgtga tcggctcgct
     1381 gctcggactc ggcctgggcg cgctcctgtg catcgggctg gcggccctga tggagtcgat
     1441 cggcgtgccg gtcggcgacc tctatctcac cccggcgccc gtgatcgccg cgctcgtggt
     1501 gggactcatc gccacggcgg cgggcgcgtt ctacccggcg cgacgcgccg cgcgcgtgcc
     1561 tccgatccag gccgcgcagg gcacgctcga gacgaaacgg ccgaagcggc tccggcgcgc
     1621 gctgatcgga ctggcgctgc tcgccccggg cgcggtgtac ggcggcacgt tctggatgag
     1681 cgacagcgcc ggcaacgggg cgctcgcggc catcaccggc gtcggcgcca cgatgctgat
     1741 gttcgtcggc atggccgtca tggcgcccgt cgtgatcatg ccgctcgtga gcgcgctcgc
     1801 cgccccgctg cggcggctgt tcccggtcgg cggccggctg gcgtccgacg ccgcccgctc
     1861 gaaccccgcg cgcaccgcgg ccacggccgt cgcgctcacc atcgggctgt cggtgatcgt
     1921 ggtgaacagc tcgatgtcct ccagcttcct cggcacgatc tccgaccaga tcgaccagag
     1981 ctacgcgcgc gacttcaccg tcgccccggc cggaagcacc atcg
//
LOCUS       DASSYW010000588         2025 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1669128, whole genome shotgun sequence.
ACCESSION   DASSYW010000588 DASSYW010000000
VERSION     DASSYW010000588.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2025)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2025)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2025
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1669128"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..504)
                     /locus_tag="VFN38_09405"
     CDS             complement(<1..504)
                     /locus_tag="VFN38_09405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017979455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HET9012017.1"
                     /translation="MKPQQIRNFCIIAHIDHGKSTLADRLLESTATLTSKQMQAQVLD
                     SMDLERERGITIKSHAVRMQYRARDGQDYVLNLIDTPGHVDFSYEVSRSLAACEGAIL
                     LVDASQGVEAQTLANLYLALDQGLVLVPAVNKVDLPGALADDTVQQVVEVLGCKPDEV
                     LRVSAKTG"
     gene            complement(535..1128)
                     /locus_tag="VFN38_09410"
     CDS             complement(535..1128)
                     /locus_tag="VFN38_09410"
                     /inference="COORDINATES: protein motif:HMM:NF040144.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5683 domain-containing protein"
                     /protein_id="HET9012018.1"
                     /translation="MGGVRRQVWGVLVGILAAAPWTTVAAMPPVDGGGATAGVQLAAR
                     DWFGRPAVAGPERRWQQDKNPTVAMVSSFLIPGLGQLYNEREFWSLVAASVHFYFIGD
                     IVVEQRLTNRYNTLKNVPVDSLDAAAVAARKEAEVLYLLHRDNRIQSTWLLGLTLILS
                     GLQSYVDAHLFHFEATAPLQLEPSFGAVQGGVLRLRF"
     gene            complement(1143..1239)
                     /locus_tag="VFN38_09415"
     tRNA            complement(1143..1239)
                     /locus_tag="VFN38_09415"
                     /product="tRNA-Sec"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1203..1205),aa:Sec,seq:tca)
     gene            complement(1380..1760)
                     /locus_tag="VFN38_09420"
     CDS             complement(1380..1760)
                     /locus_tag="VFN38_09420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019239 - deaminase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rid family detoxifying hydrolase"
                     /protein_id="HET9012019.1"
                     /translation="MRRVVRTPEAPAAVGPYSQGIAAAPFVWTAGQVGLDPATGKLVP
                     GGIEAESRRTLQNIQAILASAGAGLEDVVKVTVFLTRMDDFAAMNRVYAEFFLDPPPA
                     RTTVAVQALPAGALVEIDALAFRP"
     gene            complement(1771..>2025)
                     /locus_tag="VFN38_09425"
     CDS             complement(1771..>2025)
                     /locus_tag="VFN38_09425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA];
                     GO_process: GO:1901135 - carbohydrate derivative metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HET9012020.1"
                     /translation="GYRKIVGNVEEVKARKGRIIAVVTEGDMEIVKKADHTIIVPETL
                     GLLTPILSVVPLQLLAYHIAVLRGCDVDRPRNLAKSVTVE"
BASE COUNT          327 a          698 c          680 g          320 t
ORIGIN      
        1 ccccgtcttg gcggaaacgc gcagcacttc gtccggcttg cacccgagca cctcgaccac
       61 ttgctgcacg gtgtcgtcgg ccagcgcgcc gggcaggtcg accttgttca ccgccggcac
      121 gaggacgagc ccctgatcga gcgccaggta gaggttggcc agcgtctgcg cctcgacgcc
      181 ctgggatgcg tccaccagca agatggcgcc ttcgcaggcg gccaggctgc gcgacacctc
      241 gtaggaaaag tccacgtgtc cgggcgtgtc gatgaggttg agcacgtagt cctggccatc
      301 gcgggcacgg tattgcatgc gcacggcgtg gctcttgatg gtgatgccgc gctcgcgttc
      361 gagatccatg gaatcgagca cctgcgcctg catctgcttc gacgtcaggg tggccgtgct
      421 ctccagcagc cggtcggcga gggtggactt gccgtggtcg atgtgggcga tgatgcagaa
      481 gttgcggatc tgctgcggct tcatggtgtc gtcgcgctct ccggggtcga ggaactagaa
      541 acgtaggcgc agcacgccgc cttggaccgc gccgaagctc ggctcgagct gcagcggggc
      601 ggtggcctcg aagtggaaga ggtgcgcgtc gacataggac tgcaggccgc tcaagatgag
      661 cgtcagtccc aacagccagg tgctctggat gcggttgtcg cggtgcagga ggtagagaac
      721 ctccgcttcc ttccgtgccg ccaccgccgc ggcatccagc gagtccaccg gcacgttctt
      781 cagggtgttg taccgattcg tcagtcgttg ctccaccacg atatccccga tgaagtagaa
      841 gtgcacgctc gccgccacca gcgaccagaa ctcgcgctcg ttgtacagct gccccagacc
      901 ggggatcagg aacgagctca ccatcgcgac cgtcgggttc ttgtcctgct gccagcgccg
      961 ctcggggccc gcgaccgccg ggcgcccgaa ccaatcgcgc gcggcgagct gcacccctgc
     1021 cgtcgccccg ccgccgtcga caggcggcat cgccgccacc gtcgtccacg gcgctgccgc
     1081 gagaatcccg acgaggacac cccagacctg tcgccgcacc ccgcccatga cactccgaat
     1141 gatggcggga acgtgtggga atcgaaccca cctcggatgg gattagcacc cgacaaaggg
     1201 tttgaagccc tcgaggccca ccaggaccta tccattccct tggctgccgt cgcgggcagg
     1261 cccgcgtgcg ccgggtcatg gtagggaacc cggccgcggc gccgcaagcg cggcgcccgg
     1321 cgggcggccg aatgccaccg catcgcagcg gcgcccgcca cgatcgcagc ggccaagact
     1381 cagggtcgaa acgccaaggc gtcgatctcc accagtgcgc ccgcgggcag cgcctgcacc
     1441 gcgacggtgg tgcgtgccgg tggcggatcc aggaagaatt ccgcatagac gcggttcatg
     1501 gcggcgaaat cgtccatgcg ggtgaggaac acggtcacct tcacgacgtc ctccaggccg
     1561 gcgccggcgc tcgccagaat ggcctggatg ttctgcagcg tgcggcgcga ctccgcttcg
     1621 atgccgcccg gcaccagctt ccccgtcgcc ggatcgaggc cgacctggcc ggccgtccac
     1681 acgaagggcg cggcggcgat gccctgactg tagggaccga ccgccgccgg ggcctctggg
     1741 gtgcgaacga cgcgtcgcat gcgacctcca ctactccacg gtgaccgact tcgccagatt
     1801 gcgcggccgg tcgacgtcgc agccgcgcag cacggcgatg tggtaggcga gcagctgcag
     1861 gggcacgacc gagaggatcg gcgtcaggag ccccagcgtc tcgggaacga tgatggtgtg
     1921 atcggccttc ttgacgatct ccatgtcgcc ttcggtgacg accgcgatga tgcgcccctt
     1981 gcgcgccttc acctcttcga cgttgccgac gatcttgcgg tagcc
//
LOCUS       DASSYW010000589         2420 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1614382, whole genome shotgun sequence.
ACCESSION   DASSYW010000589 DASSYW010000000
VERSION     DASSYW010000589.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2420)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2420)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2420
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1614382"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..456
                     /locus_tag="VFN38_09430"
     CDS             <1..456
                     /locus_tag="VFN38_09430"
                     /inference="COORDINATES: protein motif:HMM:NF024214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HET9012021.1"
                     /translation="LHVVVPPDAAARRAALDGLAAVLVEHPGRDAGLASSIRAGIAAL
                     PPEADAVVIALADQPLVSPDVVRRLCDRWRDGGVTAVAPRYRDGRGHPVLFGRSAFGA
                     LSALSGDSGARALLDSMRAELALVPVDASAPLDVDTPDALRRLAAVWRG"
     gene            527..1252
                     /locus_tag="VFN38_09435"
     CDS             527..1252
                     /locus_tag="VFN38_09435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012022.1"
                     /translation="MMRRSLTIASLFMLAAMPLAAQMKDHDPDKKAGGGTLPAGWTGR
                     TDKESAQLADAKFVAMGSGYHVTSGPAAIYWKDANNVTGPFTASATFTQTKAPMHPEA
                     YGLFFMGKNLTGANQSYAYLLVRGDGKVMVKHRAGKELHTIMDWTENAAVHKQDAAGK
                     ATNTVSVDASKPDSVRLSVNGTQVAALPGAHVGSTDGFVGLRVNHNLDVHVAEFTITP
                     KKATVGKAPAATKASKKVAQKKG"
     gene            1249..>2420
                     /locus_tag="VFN38_09440"
     CDS             1249..>2420
                     /locus_tag="VFN38_09440"
                     /inference="COORDINATES: protein motif:HMM:NF039587.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5916 domain-containing protein"
                     /protein_id="HET9012023.1"
                     /translation="MIALLLAAVLWGGGQQDVYNGRANQLHVRPPRQEESGTSVDGRL
                     DEPQWAHAALLTGFSQFSPTDGVPAEDSTEVLVWYSPTAIHFGIRAFEPHGAPRATLA
                     DRDRIGADDHVQILLGTFNDGRQATVFAVNPLGVQADGTLTESNQNLSNGFGGGALAR
                     TPADMSSDFVFQSRGEVTTTGYVIEVRIPFKSLKYQAADVQSWGLNVVRGVQHSGHED
                     SWAPARRAGLSFLAQSGVLEGLTGLRRGLVLDVNPEATQRTSGAAPAGPPTGWQYAAG
                     RPELGGNVRWGISNNLTLNGTVNPDFSQIESDAGQFVFDPRQALFFQEKRPFFLDGIE
                     QFTTPHSLIYTRTVVQPVGAVKLAGKLSGTSVAFLSAVDDVIGSASRTDHPVFNILR"
BASE COUNT          363 a          845 c          871 g          341 t
ORIGIN      
        1 ctccatgtcg tcgtgccgcc cgacgcggcc gcgcgccgcg cggcgctgga cggcctcgcg
       61 gcggtcctgg tggagcaccc ggggcgcgac gccggcctgg cgagctccat tcgcgccggc
      121 atcgccgcgc tgccgccgga ggcggacgcc gtggtcatcg cgctggcgga tcagcccctg
      181 gtgtcgcccg acgtcgtgcg gcggctgtgc gatcgctggc gcgatggtgg ggtgaccgcc
      241 gttgcgccgc gctaccgcga tggccgcggt catcccgtgc tgttcggccg atcggcgttc
      301 ggcgccctct ccgcgctcag cggagacagc ggcgcgcgcg ccctgctgga ctcgatgcgc
      361 gccgagctgg cgctcgtgcc ggtcgatgcc agcgcgcccc tcgacgtgga caccccggac
      421 gcgctgcgtc gtctggcggc ggtgtggcgg ggatgaacgg cttgcgagcg gacgtgtcgc
      481 ggggcagctt cgtgtcattg acacttcctc ttcaggagcg ccaccgatga tgcgccgttc
      541 gttgactatc gcctcgctgt tcatgctggc cgccatgccg ctggcggcac agatgaagga
      601 tcacgatccg gacaagaagg ctggcggcgg cacgctgccg gcgggatgga cgggccggac
      661 ggacaaggag agcgcccagc tggccgacgc gaagttcgtc gcgatggggt ccggctatca
      721 cgtgacgtcc ggtccggcgg cgatctactg gaaggacgcc aacaacgtga ccggcccgtt
      781 cacggcgtcg gcgacgttca cgcagaccaa ggcgccgatg caccccgagg cgtacggcct
      841 cttcttcatg gggaagaacc tgaccggcgc caaccagagc tacgcgtacc tgctcgtgcg
      901 cggcgacggc aaggtgatgg tgaagcatcg cgccgggaag gagctccaca cgatcatgga
      961 ctggacggag aacgccgcgg tgcacaagca ggacgccgcc ggcaaggcga cgaacacggt
     1021 gagcgtcgat gcgagcaagc cggactcggt gcggctgtcg gtgaacggca cgcaggtcgc
     1081 cgcgctcccg ggcgcgcacg tcggcagcac cgacgggttc gtcgggctgc gggtgaacca
     1141 caacctcgac gtgcacgtgg ccgaattcac gatcacgccg aagaaggcca ccgtgggcaa
     1201 ggcgcccgcg gcgacgaagg cctcgaagaa ggtcgcccag aagaaggggt gatcgcgctg
     1261 ctcttggccg ccgtcctctg gggcggcggc cagcaggacg tctacaacgg ccgcgcgaac
     1321 cagctgcacg tccgtccacc gcgccaggag gagtccggca cgtcggtgga cggtcgcctc
     1381 gacgagccgc aatgggcgca cgccgccctg ctgaccggct tctcgcagtt ctcgccgacc
     1441 gatggcgtgc ccgccgagga ttccaccgaa gtgctggtgt ggtattcgcc caccgcgatc
     1501 cacttcggca tccgcgcctt cgagccgcac ggcgcgccgc gcgcgacgct cgccgaccgc
     1561 gatcgcatcg gcgccgacga ccacgtgcag atcctgctcg gcaccttcaa cgacggccgc
     1621 caggcgacgg tgttcgccgt caacccgctg ggcgtgcagg ccgacggcac gctcaccgag
     1681 tcgaaccaga acctctccaa cggattcggc ggcggcgcgc tggcgcgcac accggcggac
     1741 atgagctccg acttcgtctt ccagtcccgc ggcgaggtga cgacgaccgg ctacgtgatc
     1801 gaggtgcgga tcccgttcaa gagcctgaag taccaggcgg ccgacgtgca gagctggggg
     1861 ctcaacgtcg tgcgcggcgt gcagcactcc ggccacgagg acagctgggc gcccgcccgg
     1921 cgggcgggcc tctccttcct ggcgcagtcg ggcgtgctcg agggactgac cggcctgcgg
     1981 cgcgggctcg tgctcgacgt caatccggag gcgacgcagc ggacgtccgg cgcggcgccg
     2041 gcgggcccgc cgacgggatg gcagtacgcc gcgggccgcc ccgagctggg ggggaacgtg
     2101 cggtggggga tcagcaacaa cctgacgctg aacggcacgg tcaatcccga cttctcgcag
     2161 atcgagtcgg acgccggcca gttcgtgttc gatccgcgcc aggcgctctt cttccaggag
     2221 aagcggccct tcttcctcga cggcatcgag cagttcacga cgccgcactc gctcatctac
     2281 acccggaccg tcgtgcagcc ggtgggggcc gtgaagctcg ccggcaagct ctcgggcacg
     2341 agcgtcgcct tcctcagcgc cgtggacgac gtgatcggat cggcgtcgcg cacggaccat
     2401 ccggtgttca acatcctgcg
//
LOCUS       DASSYW010000590         2848 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_723640, whole genome shotgun sequence.
ACCESSION   DASSYW010000590 DASSYW010000000
VERSION     DASSYW010000590.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2848)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2848)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2848
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_723640"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..744)
                     /locus_tag="VFN38_09445"
     CDS             complement(<1..744)
                     /locus_tag="VFN38_09445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012024.1"
                     /translation="MPVALALGLWAALPLSSGAQSADDLQQRIEGKRSTEQKLSADAA
                     TFGRIAARLARAIAIIERKRAAVQAQLDANERKLARIKADLLRERQRLARLKRRLIFS
                     RKVLARRLREMYVAGKPDLVTVVLNSRGFADLLERGEFLRRIRDQDEEIIQAVRRARD
                     ASHRATVRLAKLRVRQQRVTDAIRKQRDALASMGELLASRRADAERVRAARLAALHNV
                     RGSRRRLEKELSRLQGEQNQAMSHVGPGGP"
     gene            956..2401
                     /locus_tag="VFN38_09450"
     CDS             956..2401
                     /locus_tag="VFN38_09450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012025.1"
                     /translation="MRLLMMLPAALLALALAPAGAGAQLAAPAAVPHSVPAQPEVGME
                     DEALIFTPQADSIAAQWRTMGVDYVRIQAYWNALSPATKSRTIPAGFDPSNPNSPGYN
                     WAPLDAAIAAVRNNGMHVMLTLNQSNPRWASTQPSRTQASWMPNPTRFAQFVTAVGKR
                     YGQQVDRYLMLSEPNQLPFLAPQFTCRGRKCTPVAPHLARSLSNAGYTAIKAADPGAQ
                     VIVGELAPIGSPPSRTSGITPLLFLQQMGCVNTKFRPIRTGLCRGFKAVRGDGFGYHP
                     YVNTKTSPFTATRNKQLAKIGDMPRLLSWLDQLTRKRRLRASTGRFRVYLTEYGYITF
                     PPNRRYGVSQAKQSVFNAQSAYVVWLLRSRIKLLTQYEFNDDRTFPTGLRFNNGRPKT
                     AFFTFPTPFFIDTRRGLARARFWGQVRPDAQRSVAIQIKQGATFSTVATLSTDAGGYF
                     TRVMRAQRRATYRFQYVTLAGTTQTSQTFRT"
     gene            2420..>2848
                     /locus_tag="VFN38_09455"
     CDS             2420..>2848
                     /locus_tag="VFN38_09455"
                     /inference="COORDINATES: protein motif:HMM:NF017181.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M42 family peptidase"
                     /protein_id="HET9012026.1"
                     /translation="MATPDTLLELLTAPGPSGYETAPTAAWRERATAFAEVSGDTLGS
                     SLAAVPGTAGGPRLAVVGHIDEIGLIVTHVSDEGFLHFIGVGGWDAQILVGQRVELAT
                     RDGRVLGVIGKKPIHLLKEDDRKKVAEIKDLHIDIGAKDGD"
BASE COUNT          425 a         1079 c          938 g          406 t
ORIGIN      
        1 cgggccgccc gggccgacgt gcgacatcgc ctggttctgc tcgccctgca gtcgcgagag
       61 ctccttctcc aggcgcctgc ggctgccgcg cacgttgtgc agcgcggcca ggcgcgcggc
      121 gcggacgcgc tccgcgtcgg cgcggcggct ggccagcagc tcacccatcg acgccagcgc
      181 gtcgcgctgc ttgcggatcg cgtcggtgac ccgctgctgg cgcacgcgca gcttggccag
      241 gcgaacggtc gcccggtggg aggcgtcgcg cgcgcggcgg acggcctgga tgatctcctc
      301 gtcctggtcg cggatgcgcc gcaggaattc cccgcgctcg agcaggtcgg caaagccgcg
      361 cgagttgagg accacggtga cgaggtcggg cttgccggcg acgtacatct cccgcagccg
      421 ccgggcgagc accttgcgcg agaagatgag gcgccgcttg aggcgggcca gccgctggcg
      481 ctcgcgcagc aggtcggcct tgatgcgcgc gagcttgcgc tcgttggcat cgagctgggc
      541 ctggacggcc gcccgctttc gctcgatgat cgcgatcgcg cgcgccaggc gagcggcgat
      601 gcgcccgaat gtggcggcgt cggcggagag cttctgctcg gtggagcgct tgccctcgat
      661 gcgttgctgg aggtcgtccg cggactgcgc gcccgacgac agcggcagcg ccgcccacag
      721 cccgagcgcc agcgcgaccg gcacgagggc ggccaggagg gctcggatgc gacgcggacg
      781 tctcactgag gtacaggccg aacccgtggc tttgcagggg gaatcgaccg gccggccacg
      841 ctagcacgca cgcacggcca gccggcccgg tcgggcccga tccgatgttg ttatgaagac
      901 atcgcaccgc aactctcggc ccgcacgtgt tttctgtgcg aggatgcccc gctcgatgcg
      961 acttctgatg atgctccccg ccgccctcct ggcgctggcg cttgcgcccg ccggcgccgg
     1021 cgcgcagctg gccgctcctg ccgcggtccc ccattccgtg cccgcccagc cggaggtcgg
     1081 catggaggac gaggcgctga tcttcacccc ccaggccgac tccatcgccg cccagtggcg
     1141 cacgatgggc gtcgactacg tccgcatcca ggcgtactgg aacgcgctgt cgcccgcgac
     1201 gaagtcgcgt acgatccccg ccggcttcga cccgtccaac cccaacagcc ccggctacaa
     1261 ctgggctccg ctcgacgccg cgatcgccgc cgtgcgcaac aacggcatgc atgtgatgct
     1321 cacgctcaac cagtccaacc cgcggtgggc cagcacgcag ccgagcagga cccaggcgtc
     1381 atggatgcct aacccgaccc gcttcgccca gttcgtcacc gcggtcggca agcgctacgg
     1441 ccagcaggtc gaccgctacc tgatgctctc cgagcccaac cagcttccgt tcctcgctcc
     1501 ccagttcacc tgccgcggcc ggaaatgcac gccggtggcc ccccatctcg cgcgcagcct
     1561 gagcaacgcc ggctacacgg cgatcaaggc cgccgacccg ggcgcccagg tgatcgtcgg
     1621 cgagctggcg ccgatcggca gcccgcccag ccggacctcc ggtatcacgc ccctgctgtt
     1681 cctccagcag atgggctgcg tgaacaccaa gttccgcccg atccgtaccg ggctgtgccg
     1741 cggcttcaag gccgtccgcg gcgacggctt cggttaccac ccttacgtga acacgaagac
     1801 ctcgccgttc acagccaccc gcaacaagca gctggccaag atcggcgaca tgccgcgtct
     1861 gctcagctgg ctcgaccagc tcacccgcaa gcggcggctg cgcgcctcga cgggccgctt
     1921 ccgcgtgtac ctgaccgagt acggctacat cacgttcccg ccgaaccgca ggtacggggt
     1981 gtcgcaggcc aagcagtcgg tgttcaacgc ccagtcggcc tacgtggtgt ggctgttgcg
     2041 ctcgcggatc aagctgctca cgcagtacga gttcaacgac gaccggacct tcccgacagg
     2101 cctgcggttc aacaacggca ggcccaagac ggcgttcttc acgttcccaa ccccgttctt
     2161 catcgacacg cgccgcggcc tcgcccgcgc gcgcttctgg ggccaggtgc gccccgacgc
     2221 ccagcgcagc gtcgcgatcc agatcaagca gggcgccacg ttcagcaccg tggcgacgct
     2281 ctcgaccgac gccggcgggt acttcacccg cgtcatgcgc gcccagcgcc gcgccaccta
     2341 ccgcttccag tacgtcaccc tcgcaggcac cacccagacg agccagacct tccggaccta
     2401 gcgactaggc tgtcgcctca tggcgacgcc ggacacgctg ctcgagctgc tgaccgcccc
     2461 gggcccgtcg gggtacgaga cggcgccgac cgccgcctgg cgcgaaaggg cgacggcctt
     2521 cgccgaggtg agcggcgaca cgctcggctc ctcgctggcc gcggttcccg gcacggccgg
     2581 cgggccccgg ctcgcggtcg tcggccacat cgacgagatc ggcctgatcg tcacccacgt
     2641 ctccgacgag ggctttctcc acttcatcgg cgtcggcggg tgggatgcgc agatcctcgt
     2701 cggccagcgc gtcgagctcg cgacgcgcga cggccgggtc ctcggagtta tcggcaagaa
     2761 gccgatccac ctgctcaagg aggacgaccg caagaaggtc gccgagatca aggacctcca
     2821 catcgacatc ggggccaaag acggcgac
//
LOCUS       DASSYW010000591         3359 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1754094, whole genome shotgun sequence.
ACCESSION   DASSYW010000591 DASSYW010000000
VERSION     DASSYW010000591.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3359)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3359)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3359
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1754094"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            169..1584
                     /gene="mgtE"
                     /locus_tag="VFN38_09460"
     CDS             169..1584
                     /gene="mgtE"
                     /locus_tag="VFN38_09460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015095 - magnesium ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015693 - magnesium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HET9012027.1"
                     /translation="MTPPHNPEERPVGALLAPDILAMLEESPELIAAETEELHPADLA
                     DVAEALPFEEIPRFLATLPKDRAGSVLEYIDEELRANLLEAMSPEQAAELVSAMTPDE
                     RADVLEELDEEHAEDIVEEMPAEARRETEQLRRYEPDTAGGLMTTEFVSESASTTVEE
                     ALRKVRVIARSGRREAMHAIYTTETDGRLAGVLSLRELLAAPEGARLSDVAWSEVQSV
                     SPFADREEVARLITNYDLVVVPVVSESHHVIGVITVDDVIDAIQEEQTEDVQKFGGME
                     ALDEPYMQIGFFNMLKKRGGWLSILLISEMFTTVAMQHFDDELKKVAALILFVPLVMS
                     AGGNSGSQATSLITRAMALREISLRDWWRVALRELPTGLALGSLLGIIGVVRITLWQT
                     LGIFSYEPHWQLIAATIGLSLVGIVTFGSLAGSMLPFLLRRLGFDPASASAPFVATLV
                     DVTGLVIYFSVALLVLGGTLL"
     gene            1581..2489
                     /locus_tag="VFN38_09465"
     CDS             1581..2489
                     /locus_tag="VFN38_09465"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HET9012028.1"
                     /translation="MTGTPRPLSRATLLVLFSACCFGSIPVLITLATRSGARLVDILA
                     WRYLIAAALLVAVSGGVRAALAPGRRVWPVLVLAGGGQAAIAFVSLSALRYIPAATLT
                     FLFYTYPAWVTVMSAVRGAERITGRRAVALALSLIGIALMVGMPGAGGLHPIGALLAL
                     SSALLYAAYIPLIDRLGRGMPPAVTSLHASAGAALVLTVVALAQGGLAVRFAPIGWTM
                     IAVLAVFSTVLAFVAFLRGLSEIGPVRTAIVSTVEPFWAALLGSLVLRQGLGPRTLAG
                     GMLIAAAVIVLQLRGVRPGVVAEAHG"
     gene            2516..2722
                     /locus_tag="VFN38_09470"
     CDS             2516..2722
                     /locus_tag="VFN38_09470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heavy-metal-associated domain-containing
                     protein"
                     /protein_id="HET9012029.1"
                     /translation="MEPLHLTIEGMTCQHCVRAVDGRLRKTPGVEVTQVTIGSADLRF
                     DPTRTTVDDIAEAIADEGYTAFRA"
     gene            2825..>3359
                     /locus_tag="VFN38_09475"
     CDS             2825..>3359
                     /locus_tag="VFN38_09475"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HET9012030.1"
                     /translation="MSLYSVRSLATFAALASVGACASLSQKEKGAIIGASAGAAVGAA
                     VGNANGSTAKGAIIGAAVGGAAGAVIGHQMDQQAKEIKQGIPGAVVERVGEGLQVTFE
                     SGLLFPYDSDVLTAAAQQNLATLASSLDKYPNTDIIIVGHTDSNGSDNYNMTLSERRA
                     NAAVNYLVSRGVDRARLR"
BASE COUNT          474 a         1157 c         1197 g          531 t
ORIGIN      
        1 ccagttcgac cagaacgtgg ccgacatgcg ggcccgcatg gagcgcggcg gcggtcgtcc
       61 cgggggcgct ccgccgcagt aggtggattg tcggtgcgcc ttgtctcgca cacctcccgg
      121 cgcctacttt gacggctcgc cgcccgccgc cgccgtcgag gacgtgccat gacgccaccg
      181 cacaatcccg aggagcggcc cgtgggggcc ctcctcgctc cggacatcct ggcgatgctc
      241 gaggagtctc ccgagctgat cgccgcggag actgaagagc tgcatcccgc cgatctcgcc
      301 gacgtggcgg aggcactgcc gttcgaggag atcccgcgct tcctcgcgac gctgccgaag
      361 gatcgcgcgg gctccgtgct cgagtacatc gacgaggagc tgcgggccaa tctcctcgag
      421 gcgatgagcc ccgagcaggc ggcggagctc gtgagcgcga tgacgcccga cgagcgcgcc
      481 gacgtcctcg aggagctgga cgaggagcac gccgaggaca tcgtcgagga gatgccggcg
      541 gaggcgcgcc gggagaccga acagctccgc cggtacgagc cggacaccgc cggcggactg
      601 atgacgaccg agttcgtctc ggagtcggcg agcaccacgg tggaggaagc gctgcggaag
      661 gtccgcgtga tcgcgcggag cggccggcgc gaggcgatgc acgccatcta cacgacggag
      721 accgacggac ggctggcggg cgtgctgtcg ctgcgcgagc tgctggccgc gcccgagggc
      781 gccaggctct ccgacgtcgc gtggagcgag gtccagagcg tgtccccgtt cgccgaccgg
      841 gaagaggtcg cgcgcctcat caccaactac gacctcgtcg tcgtgccggt ggtgagcgag
      901 tcccatcacg tcatcggcgt gatcaccgtg gacgacgtga tcgacgcgat ccaggaagag
      961 cagaccgagg acgtgcagaa gttcggcggc atggaggcgc tcgacgagcc gtacatgcag
     1021 atcggcttct tcaacatgct caagaagcgg ggcggctggc tcagcatcct gctcatcagc
     1081 gagatgttca ccaccgtcgc catgcagcac ttcgacgacg agctgaagaa ggtcgcggcg
     1141 ctgatcctct tcgtgccgct cgtcatgagc gcggggggca actccggctc gcaggcgacg
     1201 tctctgatca cccgggcgat ggcgctgcgc gaaatctccc tgcgcgactg gtggcgcgtc
     1261 gcgctgcgcg agctgccgac cgggttggcg ctcggctcgc tgctcgggat catcggcgtc
     1321 gtgcgcatca cgctctggca gaccctgggg atcttcagct acgagccgca ctggcagctc
     1381 atcgccgcca cgatcgggct ttcgctcgtg ggcatcgtga ccttcggctc gctcgccggc
     1441 tcgatgctcc ccttcctgct gcgaaggctc ggcttcgacc ccgccagcgc ctcggcaccg
     1501 ttcgtcgcca cgctcgtgga cgtgacggga ctcgtgatct acttcagcgt ggcgctgctc
     1561 gtgctcggcg gaaccctcct gtgaccggca cgcctcgccc cctctcgcgc gcgacgctgc
     1621 tggtgctgtt cagcgcgtgc tgcttcggct ccatcccggt cctcatcacg ctggccacga
     1681 ggagcggcgc gcggctggtg gacatcctgg cgtggcgata cctgatcgcg gcagcgctcc
     1741 tcgtcgcggt gagcggcggc gtgcgggcgg ccctggcgcc cggccgccgg gtgtggccgg
     1801 tgctggtgct cgccggcggc ggacaggcgg cgatcgcgtt cgtgagcctg tccgcgctgc
     1861 gctacatccc cgcggcgacg ctcacctttc tcttctacac gtatccggcg tgggtcaccg
     1921 tcatgtcggc ggtgcggggc gcggagcgca tcaccggacg tcgcgcggtg gcgctcgccc
     1981 tgtcgctgat cggcatcgcg ctgatggtgg ggatgccggg cgcaggggga ctgcacccga
     2041 tcggcgcgct gctcgcgctc tcgtcggcgc tgctctacgc cgcctacatc ccgctgatcg
     2101 atcgactcgg ccgaggcatg ccgccggcgg tgacgtcgct ccatgcgtcc gccggcgccg
     2161 cgctggtgct gaccgtggtg gcgctggcgc agggcgggct ggcggtgcgc ttcgcgccga
     2221 tcggctggac gatgatcgcc gtgctcgcgg tcttctccac ggtgctcgcc ttcgtcgcgt
     2281 tcctgcgcgg actcagcgag atcggcccgg tccgcacggc gatcgtgagc acggtggagc
     2341 ccttctgggc ggcactgctc ggcagcctcg tgctgcgaca ggggctcggt ccgcggaccc
     2401 tcgccggcgg aatgctcatc gcggcggcgg tcatcgtgct gcagctgcgc ggcgtgcggc
     2461 ccggcgtcgt ggccgaggct cacggctgaa cccggcgtca ggctagattg gagggatgga
     2521 acctcttcat ctcaccatcg aaggcatgac gtgccagcac tgcgtgcgcg cagtggatgg
     2581 ccggctgcgc aagacgcccg gcgtcgaggt gacccaggtc acgatcggca gcgccgacct
     2641 gcgtttcgac ccgacgcgca cgaccgtgga cgacatcgcg gaagcgattg ccgacgaggg
     2701 atatacggcg tttcgcgcgt agcggactcg gcacggagtg gtcccgtgct tgcgactgtg
     2761 gggtaggtct gtatcagcgt cgcgtgctcc tgcgcgccgc acgacccaca tcacggagca
     2821 gttcatgtct ctctactcgg tccgaagtct cgccacattc gccgcgctcg cctcagtcgg
     2881 cgcgtgcgcc tcgctcagtc agaaggagaa gggcgccatc atcggcgcat cggccggcgc
     2941 cgcggtgggc gccgcggtcg gcaacgcgaa cgggtccacg gccaagggcg cgatcatcgg
     3001 cgccgcggta ggcggagcgg ccggcgcggt gatcggccac cagatggacc agcaggcgaa
     3061 ggagatcaag caggggatcc ccggcgcggt cgtcgagcgc gtaggcgagg ggctgcaggt
     3121 gaccttcgag tccggcctcc tcttcccgta cgattccgac gtgctgacgg ccgcggcgca
     3181 gcagaacctc gcgacgctcg cgtcgagcct cgacaagtat cccaacaccg acatcatcat
     3241 cgtcggccac acggacagca acggcagcga caactacaac atgacgttgt cggagcgccg
     3301 cgcgaacgcc gcggtgaact atctcgtcag ccgtggcgtc gaccgcgcgc gcctgcgtg
//
LOCUS       DASSYW010000592         4084 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1430734, whole genome shotgun sequence.
ACCESSION   DASSYW010000592 DASSYW010000000
VERSION     DASSYW010000592.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4084)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4084)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4084
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1430734"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..343)
                     /locus_tag="VFN38_09480"
     CDS             complement(<1..343)
                     /locus_tag="VFN38_09480"
                     /inference="COORDINATES: protein motif:HMM:NF042468.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase PUA domain-containing
                     protein"
                     /protein_id="HET9012031.1"
                     /translation="MVERADRAPVGTFHAPGEWGATVELGEAAAHHAVVKRLKGGDRV
                     RLTSGGGRRASGTIAELAKRHLVVELDAESCEQVVAPPYVELWAPVGDRERMLVLAEK
                     AVELGASAWRPV"
     gene            complement(313..1134)
                     /locus_tag="VFN38_09485"
     CDS             complement(313..1134)
                     /locus_tag="VFN38_09485"
                     /inference="COORDINATES: protein motif:HMM:NF018076.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HET9012032.1"
                     /translation="MNWLSIRVRPGASPEAALAALFQLGSEGVHEAGAELLTHFPGDA
                     DGASIIAAVTAADPAAQVTATLVPAVDWAEEWKKGVGAHELGRLAIVPPWLAAGRDPS
                     RTVVIEPEMAFGTGEHQTTRGVVRLLPDVIRAGDRVADLGAGSAVLAIAAAKLGAAHV
                     TAIELDHDAIANAEENVVRNGVADRVSVIEGDAEVLLPFVAPVRVVLANIISSVLTGM
                     LPTIAASLAPDGEAVLSGILVEERPAMLASLEAGGWRLVGEDVEGMWWSARIARR"
     gene            complement(1131..2264)
                     /gene="dnaJ"
                     /locus_tag="VFN38_09490"
     CDS             complement(1131..2264)
                     /gene="dnaJ"
                     /locus_tag="VFN38_09490"
                     /EC_number="1.8.4.-"
                     /inference="COORDINATES: protein motif:HMM:NF008035.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HET9012033.1"
                     /translation="MADFYGVLGVERTAADDDIKKAYRKLAMTYHPDRNGGSKEAEER
                     FKEITEAYDVLRDPQKRAAYDRYGEAGLRGGAGGYHHVDLSEALSIFMRDFGGFSGLE
                     DLFGGRGQSGGGPRTGADVKITLPLTLAEVATGAEKEVRLRVLDSCDRCSGSGAEPGS
                     RVQQCPTCAGQGEVRRAQRSFFGQFVTVAPCPTCKGEGQIIESPCRKCRGEGRMRGDK
                     TIKVQVPAGVATGQYMTLRGVGNAGARNGERGDVHVVFEVADDQRFERDGEDLYTEVL
                     VTFPQLVMGAAIEVPTVTSTVALSIPPGTQSGQVFHLRGRGLARVNASGTGDLHVRVQ
                     LWTPDELSEEERQLITRLAEIQRSVPADRGKGFWAKMKEALGA"
     gene            complement(2415..3473)
                     /gene="hrcA"
                     /locus_tag="VFN38_09495"
     CDS             complement(2415..3473)
                     /gene="hrcA"
                     /locus_tag="VFN38_09495"
                     /inference="COORDINATES: protein motif:HMM:TIGR00331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heat-inducible transcriptional repressor HrcA"
                     /protein_id="HET9012034.1"
                     /translation="MAIVDELTPRERRVLEAVIQTYVQTAEPAGSRVLSRRFGLGVSP
                     ATIRNTMSDLEEKGFLTHPHTSAGRVPTDKAYRSYVDSLLTGPASAIVVSERERLRED
                     IAGSNSTIENILRRAAQSLGVLTQELGVALGPRLDASMLRRLELVQVGGDRLLLVLTL
                     DGGVVRTVFVEVRGRLAESAVTEVTRVLNERLAGHTLRELRMSVAERLRDSSTRPEAA
                     ELLNIFVQEGEALFDAALPMAEGSVIVGQASVLASQPEFGGAESLRRLLTLTEEPARL
                     ADALRRKHKGDERPGVSITIGAEHGDPQFDQFTVVTAEYHVGALNGVIGVIGPTRMPY
                     DKVISLVQHTSRLLSDLL"
     gene            complement(3487..>4084)
                     /locus_tag="VFN38_09500"
     CDS             complement(3487..>4084)
                     /locus_tag="VFN38_09500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012035.1"
                     /translation="DVARLIALDPDHVSLYGLTIESGTPLGRWVARGTAVEQPEEGYE
                     RDFLSAHRLLAGAGFEHYEVSNYARPGRRARHNSAYWSGASYVGVGPAAHGYDGDSRR
                     WNLRGYAAWRDAALAGADPLEGSERLTPENRSAEAVYLGLRSISGLELAASDHAAVSP
                     WVAAGWARIGTDGRLRCTAEGWLRLDALAAALTHHRSR"
BASE COUNT          548 a         1560 c         1392 g          584 t
ORIGIN      
        1 ccaccggccg ccacgccgag gcgcccagct ccaccgcctt ctcggcgagc acgagcatgc
       61 gctcgcggtc gccgacgggc gcccagagct ccacgtacgg cggcgccacc acctgctcgc
      121 acgattccgc gtcgagctcc acgacgaggt gccgcttcgc cagctcggcg atcgtgccgc
      181 tcgcccggcg gccgccgccg ctcgtgagcc ggacccggtc gccccccttc aggcgcttca
      241 ccacggcgtg atgcgcggcg gcctcgccca gctccaccgt cgcgccccac tcgccgggcg
      301 cgtggaaggt gcctaccggc gcgcgatccg cgcgctccac cacatgccct ccacgtcctc
      361 tcccaccagg cgccagccgc ccgcctcgag cgaggcgagc atcgccggcc gctcctcgac
      421 gaggatcccg ctcagcaccg cctcgccgtc gggcgcgagg gaggcagcga tcgtcggcag
      481 catcccggtg agcaccgacg agatgatgtt ggccagcacg acgcgcaccg gcgcgacgaa
      541 ggggagcagc acttcggcgt cgccctcgat gacgctgacg cggtcggcca cgccgttgcg
      601 cacgacgttc tcctcggcgt tggcgatcgc gtcgtgatcg agctcgatcg ccgtgacgtg
      661 cgccgcgcca agcttcgccg cggcgatggc gagcaccgcg ctgccggcgc ccaggtcggc
      721 cacgcggtcg ccggcgcgga tcacgtcggg caggagccgc acgacgccgc gcgtcgtctg
      781 atgctccccc gtgccgaacg ccatctcggg ctcgatgacg acggtgcgcg acggatcgcg
      841 gccggcggcc agccagggtg gcacgatggc gagccgtccc agctcgtgcg cgcccacccc
      901 cttcttccac tcctccgccc agtccaccgc gggaacgagc gtcgccgtca cctgcgccgc
      961 ggggtcggcc gcggtgacgg ccgcgatgat gctcgcgccg tcggcgtcgc cgggaaagtg
     1021 cgtgagcagc tcggcgcccg cttcgtgcac cccttcggag ccgagctgga acagcgcggc
     1081 gagcgccgcc tcgggcgatg cgcccgggcg cacgcggatg gagagccagt tcacgcgccc
     1141 agcgcttcct tcatcttcgc ccagaatccc ttgccgcgat cggccggcac gctgcgctgg
     1201 atctcggcga ggcgcgtgat gagctgccgc tcctcctccg acagctcgtc cggcgtccag
     1261 agctgcacgc gcacgtggag gtcgcccgtg ccgctcgcat tcacgcgcgc cagcccgcgg
     1321 ccgcgcaggt ggaacacctg cccgctctgc gtgccgggcg ggatgctgag cgccacggtg
     1381 gaggtgacgg tgggcacctc gatcgcggcg cccatcacga gctgcgggaa ggtgaccagc
     1441 acctcggtgt agagatcctc gccgtcgcgc tcgaagcgct ggtcgtcggc gacctcgaac
     1501 accacgtgca cgtcgccgcg ctcgccgttg cgggcgccgg cattgcccac gccgcgcaac
     1561 gtcatgtact ggccggtcgc cacgcccgcc ggcacctgca ccttgatcgt cttgtcgccg
     1621 cgcatgcggc cttcgccgcg gcacttcctg cacggcgact cgatgatctg cccctcgccc
     1681 ttgcaggtgg gacagggcgc cacggtgacg aactgcccga agaacgagcg ctgggcgcgg
     1741 cgcacctcgc cctgaccggc gcaagtgggg cactgctgca cgcgagaccc gggctcggcg
     1801 ccgctgccgg agcagcggtc gcaggagtcg agcacccgca gccgcacctc cttctccgcg
     1861 cccgtggcca cttcggcgag ggtgagcggc agggtgatct tcacgtcggc gccggtgcgc
     1921 gggccgccgc cgctctggcc gcgcccgccg aacaggtcct ccagccccga gaatccgccg
     1981 aagtcgcgca tgaagatgct gagcgcctcg gacagatcca cgtggtggta gccgcccgcg
     2041 ccgccccgca gccccgcctc gccgtaccgg tcgtacgccg cgcgcttctg cggatcgcgc
     2101 aggacgtcgt acgcctcggt gatctccttg aaccgctcct ccgcttcctt cgatcccccg
     2161 ttgcgatcgg ggtgataggt catcgcgagc ttgcggtacg ccttcttgat gtcgtcgtca
     2221 gcggcggtcc gctcgacgcc gagcactccg tagaaatcag ccatggggga aatatagagg
     2281 aacggcgcga cggccaagcg gtgaagcggt tgggcggttg ggcggtcatt cggtcaagcg
     2341 gtcaccgcct tggcgcctta ccgtctcagc gccttggcgc ctcaccgccc caccgccttg
     2401 ccgccctacc gccgttacag cagatcgctc agcagtcggg acgtgtgctg caccagggag
     2461 atcaccttgt cgtacggcat gcgcgtgggg ccgatgacgc cgatgacgcc attgagcgcg
     2521 ccgacgtgat attccgccgt gaccacggtg aactggtcga actgcggatc accgtgctcg
     2581 gcgccgatgg tgatcgagac gccgggccgc tcgtcgccct tgtgcttgcg gcgcagcgca
     2641 tcggccaggc gggcgggttc ctcggtgagc gtcagaagcc ggcggaggct ctccgccccg
     2701 ccgaactcgg gctgcgacgc gagcacgctc gcctgcccca cgatcacgct cccctcggcc
     2761 atcgggagcg cggcgtcgaa cagcgcctcg ccctcctgca cgaagatgtt cagcagctcc
     2821 gccgcctcgg gcctggtgga gctgtcgcgc aggcgctccg ccaccgacat ccgcagctcg
     2881 cgcagcgtgt ggccggcgag tcgttcgttc agcacccgcg tcacctcggt gacggcgctc
     2941 tcggccagcc gcccgcgcac ctcgacgaac acggtgcgca ccacgccgcc gtccagcgtc
     3001 aggaccagga gcaggcggtc gccccccacc tgcacgagct cgagccggcg cagcatgctg
     3061 gcatcgagcc gcggcccgag cgcgaccccg agctcctggg tgagcacgcc gaggctctgc
     3121 gcggcgcgcc gcaggatgtt ctcgatcgtg gagttgctgc ccgcgatgtc ctcccgcagc
     3181 cgctcgcgct cggagaccac gatggcgctc gccggtcccg tgagcagcga gtccacgtac
     3241 gagcggtacg ccttgtcggt gggcacccgg ccggcggagg tgtgggggtg ggtgaggaac
     3301 cccttctcct cgaggtcgct catcgtgttc cggatggtcg cgggcgatac gcccagcccg
     3361 aaccgccgcg acagcacgcg cgaccccgcc ggctccgcgg tctggacata cgtctggatc
     3421 accgcttcga gcacgcggcg ctcgcggggg gtgagctcgt cgacgattgc cataagtgta
     3481 aatgtactaa cgacttcggt gatgcgtcaa ggcggccgcg agcgcgtcga gccgcagcca
     3541 cccctccgcg gtgcagcgca ggcggccgtc ggtcccgatc cgtgcccacc ccgcagccac
     3601 ccagggtgac accgccgcgt ggtcgctcgc ggcaagctcg agtccggaga tggatcgcag
     3661 ccccaagtac accgcctcgg cgctccggtt ctccggcgtg agccgctccg agccctccag
     3721 cgggtcggcc ccggcgagcg cggcgtcgcg ccacgccgca taaccgcgga ggttccagcg
     3781 gcggctgtcg ccgtcgtacc cgtgcgcggc gggaccgacg cccacatacg acgccccgct
     3841 ccagtatgcc gagttgtggc gggcccgccg gcccggcctc gcgtagttcg acacttcgta
     3901 gtgctcgaag cccgcgccgg cgagcagccg gtgcgccgag aggaagtctc gctcgtaccc
     3961 ttcctcgggc tgttcgacgg ccgtgccccg cgccacccat cgcccgagcg gggtgccgga
     4021 ctcgatcgtg agtccgtaga gcgagacgtg atccggatcg agcgcgatca ggcgggcaac
     4081 gtcg
//
LOCUS       DASSYW010000593         2307 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1659780, whole genome shotgun sequence.
ACCESSION   DASSYW010000593 DASSYW010000000
VERSION     DASSYW010000593.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2307)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2307)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2307
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1659780"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(16..1974)
                     /gene="metG"
                     /locus_tag="VFN38_09505"
     CDS             complement(16..1974)
                     /gene="metG"
                     /locus_tag="VFN38_09505"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: protein motif:HMM:NF008900.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0004825 - methionine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HET9012036.1"
                     /translation="MSRYYLTTAIDYVNSRPHLGTAYEKVTADVIARYKRLAGFDVHF
                     LMGNDEHSQNVYKKAAEEGFHNKPVAYCDRMEQEFTAVWKALHCSYDDFIRTTQPRHK
                     AAVQKLARAAYDAGDIYEGVYEGWYCVSCEAFKPEKDLVDGKCPVHPTLTPEWIREKN
                     YFFRLSKYRDRLIKHFDAQPSFLEPEIRRNEILRLLDAGLDDISMSRAGQSWGVPLPF
                     DPDSVVYVWFDALINYATAVGYGTDDARFATWWPADLHVIGKDITRFHTVVWPAMLWS
                     AGLEVPRQVFGHGWLHYGGQRMSKSLGTSVDPVEAAEKFGPDAIRLYLTKEITYGSDG
                     DFTWERFEERYNVDLANNLGNLVSRVVSMADKYRGGRLAAAGDGGRLAGVAGEALARY
                     RTSMDAFALHDGVAAAYDLVDATNGFIADSAPWKLAKDPANAARLDAVLFEAAEAVRV
                     AAVLLQPVMPSSCAEILRRIGAPLTGDALRLDHAAWQSAGERATIPGPPMWPRSEPKE
                     ITVTEPAAPAPPPAPAATPAPAAPAAAPAEAAPAGERIGIEDFLKVELKVAKVREAAA
                     MPKSKKLIRLLVDVGEPEPRTILAGIAEGYQAEQLVGKTIVIVANLKPRLMMGTESNG
                     MVLAASGPGQPPILVAADDSLPPGTRVG"
     gene            complement(1971..>2307)
                     /gene="larC"
                     /locus_tag="VFN38_09510"
     CDS             complement(1971..>2307)
                     /gene="larC"
                     /locus_tag="VFN38_09510"
                     /EC_number="4.99.1.12"
                     /inference="COORDINATES: protein motif:HMM:NF014072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="nickel insertion protein"
                     /protein_id="HET9012037.1"
                     /translation="MKQNRPGTLLTVIAPPDARTALTELIFRETTTIGVRYRESEREV
                     LDRAIVVVTTDVGPIRVKVARQRDEVLNVSPEFDDCVRAARAAGRAVKDVQALAVRAF
                     HDRTHGASA"
BASE COUNT          323 a          796 c          800 g          388 t
ORIGIN      
        1 gtgcgggcga tagcgttacc caacgcgggt gccgggcggc aggctgtcgt cggccgcgac
       61 gagaatgggc ggctgccccg gaccgctggc ggccagcacc atgccgttcg actcggtgcc
      121 catcatcagg cgcggcttca ggttggcgac gatgacgatc gtcttcccca ccagctgctc
      181 cgcctgatac ccctcggcga tgcccgccag aatcgtgcgg ggctccggtt cgccgacgtc
      241 gacgagcagc cgaatcagct tcttcgactt cggcatggcc gctgcctcgc gcaccttggc
      301 caccttcagc tcgaccttca ggaaatcctc gatgccgatg cgctcgccgg ccggtgcggc
      361 ctccgcgggc gcggcggcgg gtgcggctgg cgccggagtc gctgcaggcg ctggtggcgg
      421 cgcgggtgcc gcgggttcag tcacggtgat ctccttcggt tctgaacggg gccacatcgg
      481 cggccccgga atggtggcgc gctcgcccgc cgactgccac gcggcgtggt cgagccgcag
      541 ggcgtcgccg gtcaggggcg cgccgatacg gcgcagaatc tcggcgcacg acgacggcat
      601 cacgggctgc agcagcacgg ccgccacgcg caccgcttcc gcggcttcga acagcacggc
      661 gtcgagacgc gcggcgttgg ccggatcctt ggcgagtttc cacggcgcgc tgtcggcgat
      721 gaagccgttg gtcgcgtcca cgaggtcgta ggctgcggcc acgccgtcgt gaagtgcgaa
      781 ggcgtccatc gacgtgcggt accgcgccag cgcctcgccc gccacgccgg ccagccggcc
      841 gccgtcgccc gccgccgcaa ggcggccgcc gcggtacttg tcggccatcg atacgacgcg
      901 gctcaccagg ttgcccaggt tgttggccag gtccacgttg tagcgctctt cgaagcgctc
      961 ccacgtgaag tcgccgtcgc tgccgtaggt gatttccttc gtcaggtaga gacggatcgc
     1021 gtccgggccg aacttctccg ccgcttccac cgggtccacg ctggtgccga gcgacttgct
     1081 catgcgctgc ccgccgtagt gcagccagcc gtggccgaac acctggcggg gcacctcgag
     1141 ccccgcgctc cacagcatcg cgggccagac caccgtgtgg aagcgcgtga tgtccttgcc
     1201 gatgacgtgc aggtccgccg gccaccatgt ggcgaatcgc gcgtcatcgg tgccgtagcc
     1261 gacggccgtg gcgtagttga tgagcgcgtc gaaccagacg tagacgacgc tgtccgggtc
     1321 gaacggcagc ggcacgcccc acgactggcc cgcccggctc atcgagatgt cgtcgagacc
     1381 ggcgtcgagc agccgcagga tctcgttgcg ccggatctcc ggctcgagga acgacggctg
     1441 ggcatcgaag tgcttgatga gccggtcgcg gtacttcgag agccggaaga agtagttctt
     1501 ctcgcgaatc cactcgggcg tgagcgtcgg atggaccggg cacttgccgt ccaccagatc
     1561 tttctccggt ttgaacgcct cgcacgagac gcagtaccac ccctcgtaca cgccttcgta
     1621 gatgtcgccg gcgtcgtagg ccgcccgcgc gagcttctgg accgccgcct tgtgccgcgg
     1681 ctgcgtggtg cggatgaagt cgtcgtacga gcagtgcagc gccttccaga cggcggtgaa
     1741 ctcctgctcc atccggtcgc agtacgccac cggcttgttg tggaaccctt cctcggccgc
     1801 cttcttgtag acgttctgcg agtgctcgtc gttgcccatc aggaaatgga cgtcgaagcc
     1861 ggcgagccgc ttgtagcggg cgatgacgtc ggccgtcacc ttctcgtagg cagtgccgag
     1921 atggggacgg ctgttgacgt aatcgatggc agtggtcagg tagtagcggc tcacgcggag
     1981 gctccgtggg ttcggtcgtg gaacgcgcgg accgcgagag cctgcacatc cttcaccgct
     2041 cggccggcgg ccctggccgc gcggacgcag tcgtcgaact cgggcgacac gttcagcacc
     2101 tcgtcgcgct gccgcgccac cttgacgcgg atcgggccca cgtccgtcgt cacgacgacg
     2161 atcgcgcgat cgagcacctc gcgctcggac tcgcggtagc gcacgccgat cgtggtcgtc
     2221 tcgcggaaga tgagctccgt gagcgcggtg cgcgcgtccg gcggcgcgat gacggtcagc
     2281 agcgtgcccg ggcggttctg cttcatc
//
LOCUS       DASSYW010000594         2548 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_352105, whole genome shotgun sequence.
ACCESSION   DASSYW010000594 DASSYW010000000
VERSION     DASSYW010000594.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2548)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2548)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2548
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_352105"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..722
                     /locus_tag="VFN38_09515"
     CDS             <1..722
                     /locus_tag="VFN38_09515"
                     /inference="COORDINATES: protein motif:HMM:NF012422.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /protein_id="HET9012038.1"
                     /translation="HVARGEHRRAIEVGERGLALVDRTGYVAWAVHRLLPGIIEAALW
                     IRDLDTAERYRDRLRRDSEQLGHQLGLAWADTCDAIVSMLREDYAAAIPLLRRGADAL
                     DAVPWVLDAARVRRNLGWALGITGDRDAAARELRRAHDVFVSLGAEPQVTATRDVIRE
                     LGLRPPARAQSSGVGALTGREVDVARLAAAHRSNKEIATALGISPRTVSTHLSSIFVK
                     LEVGSRGEMADVVRREGIAER"
     gene            946..1362
                     /locus_tag="VFN38_09520"
     CDS             946..1362
                     /locus_tag="VFN38_09520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012039.1"
                     /translation="MRRLLSFVLLMFAPVVLAGCGSDSITDPSASVAGTYSLASFDGA
                     APPIVLLDGDPRIEVVSDVLTLAAAGTFTQRTTFRYTEGGVISSDEQLETGTFTMAGT
                     TLTLRFTSDGSSQPATVSDKTIVIAVEGHTLRYVRP"
     gene            1637..2404
                     /locus_tag="VFN38_09525"
     CDS             1637..2404
                     /locus_tag="VFN38_09525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012040.1"
                     /translation="MNASTRFLSAVSVLSLAGLAGCADSTGTGGAGPVSLSFSTVPAT
                     AATASVSGASFALLGSADAIVITKAQIVMSKSELERIGASCVAATETNEDSCPDLKLG
                     PMLIDLPLDATAKGVLAVTLPAGSYQQFESKIDAVMSETEGDGAASAAFLAANPQFRG
                     VSVRVEGTFNGAPFVYTSAPEGELELTFNPPLVVDGSAGNLTVHVDLSSWFRRSDGSV
                     IDPRTATAGTATREVVDDNIKRSFDVFEDDDRNGRED"
BASE COUNT          349 a          950 c          862 g          387 t
ORIGIN      
        1 accacgtcgc ccggggggag caccggcgcg cgatcgaggt gggcgagcgc gggctggcgc
       61 tggtggaccg cacgggctac gtggcgtggg cggtgcaccg gctgcttccc ggcatcatcg
      121 aggcggcgct ctggatccgc gacctcgaca ccgccgagcg ctatcgcgac cggctgcggc
      181 gcgattcgga gcagctcggc catcagctcg gcctcgcctg ggccgacacc tgcgacgcga
      241 tcgtctcgat gctgcgcgag gactacgcgg cggcgattcc cctgctccgc cgcggcgccg
      301 acgcgctgga cgcggtgccc tgggtgctgg acgccgcgcg ggtgcgccga aacctcggct
      361 gggcgctcgg catcacgggc gaccgcgacg ccgccgcgcg cgagctccgg cgcgcccacg
      421 acgtgttcgt ctccctgggc gcggagcccc aggtcaccgc cacgcgcgac gtgatccgcg
      481 agctcggcct gcgcccgccg gcgcgtgccc agagctccgg cgtcggggcg ctcaccggcc
      541 gcgaggtcga cgtcgcccgg ctggccgcgg cgcaccgctc caacaaggag atcgccaccg
      601 cgctcggcat ctccccccgc acggtgagca cccacctctc cagcatcttc gtgaagctcg
      661 aagtcgggtc gcgtggggag atggcggacg tggtgcggcg ggaagggatc gcggagcggt
      721 gatcgccggg cgggcgcggc ggggcggggg ctgagcggcc gaccgcgccc ccgatgctcc
      781 tacgtacacg ttcccgcatc tctacgtcga acgcccgagg gaaacgcccg agctgcttcg
      841 cgacactttt ggcgcgttgc cggacgtccc ggtccggcag gcggcgcgcc accggcggcg
      901 cgccaatccg gctctcccac cgcgacacac tcgcacgagg cttcgatgcg ccgtctcctc
      961 tcgttcgttc ttctcatgtt cgcgccggtc gtcctggccg gttgcggctc cgacagcatc
     1021 accgatccca gcgcgtccgt cgccggcacc tattcgctcg cctcgttcga cggcgcggcg
     1081 ccccccatcg tcctgctgga cggcgatccg cgcatcgagg tggtctcgga cgtcctgacc
     1141 ctcgccgccg ccggcacctt cacccagcgc acgaccttcc gctataccga gggaggcgtc
     1201 atctcgagcg acgagcagct ggagaccggg accttcacga tggccggcac gacgctgacc
     1261 ctgcgtttca ccagtgacgg atcgtcccag ccggccacgg tgtccgacaa gaccatcgtc
     1321 atcgccgtcg aggggcacac cctgcggtac gtgcgaccgt aggggtcggg catcccccga
     1381 cctgcgccag actggaacac aacgtaagat gcccctataa cgaatcgtta taggggcatc
     1441 ttcgtgtgac ggggcgcaca taccgtaacg tgttgcggct caatggcttg gcgtcgtcgg
     1501 ccgcaccggc cgatgcggca cgccgttcgc cttgtaccgg gtcgactccg cccgctccca
     1561 ccttcaggac gagagccgga tgccgcggcg cggagcagca tcggcctcgt ttcacgagct
     1621 tcaaggagca cagatcatga acgcctcgac ccgcttcctc tccgccgtca gcgtgctctc
     1681 cctggccggc ctggccggct gcgccgattc cacgggcacc ggcggcgccg gcccggtgag
     1741 cctctccttc tccacggtcc cggcgaccgc cgcgacggcg tccgtgtcgg gcgcgagctt
     1801 cgcgctgctc ggcagcgccg acgcgatcgt gatcacgaag gcgcagatcg tgatgtccaa
     1861 gtccgagctg gagcgcatcg gcgcctcgtg cgtcgcggcg accgagacga acgaggacag
     1921 ctgccccgac ctgaagctcg ggcccatgct catcgacctg cccctcgacg cgacggcgaa
     1981 gggagttctc gcggtgacgc tgccggccgg ctcgtaccag cagttcgagt ccaagatcga
     2041 cgccgtgatg tccgagaccg aaggtgacgg tgccgcgtcc gccgcgtttc ttgccgcgaa
     2101 tccgcagttc cgcggcgtga gcgtccgggt ggagggtacc ttcaacggcg cgccgttcgt
     2161 ctacacctcg gcccccgaag gggagctcga gctgaccttc aatccgccgc tcgtcgtgga
     2221 cggctcggcc ggcaacctca cggtgcacgt ggacctgtcg agctggttcc gccggtcgga
     2281 cgggtcggtc atcgatccgc gcacggccac ggcgggtacg gcgaccaggg aagtggtgga
     2341 cgacaacatc aagcgctcgt tcgacgtctt cgaggacgac gatcgcaacg ggcgtgaaga
     2401 ctaggaccat gcgactccgg tggcgcggcg aacctggccg cgccatccgg agcgtccctc
     2461 cggcctgacc gggccgcctg cccccccgcg ccgtgcctct cctctccctg ctctccctca
     2521 gcgactcctt ctcggcgcaa tggccgct
//
LOCUS       DASSYW010000595         3307 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1308139, whole genome shotgun sequence.
ACCESSION   DASSYW010000595 DASSYW010000000
VERSION     DASSYW010000595.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3307)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3307)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3307
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1308139"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1131)
                     /locus_tag="VFN38_09530"
     CDS             complement(<1..1131)
                     /locus_tag="VFN38_09530"
                     /inference="COORDINATES: protein motif:HMM:NF013927.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0017000 - antibiotic biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin acylase family protein"
                     /protein_id="HET9012041.1"
                     /translation="MRSRTPVVVALAAVLVLALPGAAGAERLRVPGLRQPADMTRTTL
                     GVPQIHANNAHDAYFTQGYLHASDRLFQMDQSRRQASGRLAELLGPSAIAGDVQLRTL
                     GLRRAAVRSLDALSAETRAALDAYAEGVNAWIAANPLPSEYGALELTKASVPEWTALD
                     SVTVGKLLAFGLSFGLDDISNTQKLIAYQTAGAGLGFNGAALFFQDVMRSEPFAHAPS
                     IRPGEISRPVRTHGRPDWSKAPDDEDLLAAAEKAMKAGKAAGIGENPIDVGSNAWVVA
                     GSKSTSGRAMVANDPHLSLSSPSVFYEVGYRITGGPDGQDLYGVSFPGAPGIVQGTNG
                     RVSWGSTVNPTDVTDVYNEELLIQGGVPVATRYKGQWEPTTII"
     gene            complement(1270..1530)
                     /locus_tag="VFN38_09535"
     CDS             complement(1270..1530)
                     /locus_tag="VFN38_09535"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HET9012042.1"
                     /translation="MSELLLDAAARTELRRVAREAGVRRRFAPHQLRHAHAVEMAREG
                     VPLIVIQRQLGHNLGVTSIYLQDIDNTEIRALLLPGRRFRAR"
     gene            complement(1824..>3307)
                     /locus_tag="VFN38_09540"
     CDS             complement(1824..>3307)
                     /locus_tag="VFN38_09540"
                     /inference="COORDINATES: protein motif:HMM:NF013739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HET9012043.1"
                     /translation="LLAHAGKRVLVVEADQRPGGYARALRHGPYVFDRADHLTTSCEP
                     NGPFGQGVIDAVLRELGVRERCEFLRVDDPFYVARYPAFELAVPCGREAFLEAHLRHF
                     PAEARGLRRLAELSCELYRETLSWPMRPRVSDLARAPLRSRTLLRYGTATLRQMLDRE
                     LSDPRLKALYATLSWGWIGAPPSHASFLAWAVMMGTYVEDGAYYCRGSFQRLVDALVA
                     GLEEHGGELLLGTRVARILSDDGRVTGVELDDAQRITAPTVVSAIDARTTFEDLVGAE
                     RLPARFLRRLRARELSPSTVSIHVVTDLDARALGARHDTSVARTWDLERVFADALRAR
                     IQAAHVVIPSLTDPTLAPAGEHVVMVQGPAARESGEAPHDDRRIADDLLSYAEDVLPG
                     LRQHIRFAEPAGDQAPASHPKVHRMGPIYGWMNSPAQTGLRRLAPTTPVSGLLLAGQW
                     TQPGAAMLWVAESGIQAARLALGATTAAPPLPLGLTTTHPAAR"
BASE COUNT          488 a         1172 c         1173 g          474 t
ORIGIN      
        1 gatgatcgtc gtcggctccc actgaccctt gtacctcgtg gccacgggca cgccgccctg
       61 gatcagcagt tcctcgttat agacgtcggt gacgtcggtc gggttcacgg tagagcccca
      121 cgagacgcgc ccgttggtgc cctgcacgat gcccggcgcg ccgggaaagc tcacgccgta
      181 caggtcttgg ccgtccggcc cgccggtgat gcgataaccc acctcgtaga acaccgacgg
      241 cgacgacagc gacagatgcg ggtcgttcgc caccatcgcc cgcccgctcg tcgacttcga
      301 ccccgccacg acccatgcgt tggagccgac gtcgatcggg ttctcgccga tgccggccgc
      361 cttgccggcc ttcatggcct tctccgccgc cgcgagcagg tcctcgtcgt ccggcgcctt
      421 cgaccagtcg gggcgaccat gcgtcctgac cggcctcgag atctcccccg gccggatcga
      481 cggcgcgtgc gcgaacggct cgctgcgcat cacgtcctgg aagaacagcg cggcgccgtt
      541 gaagcccagg cccgcaccgg ccgtctggta cgcgatcagc ttctgcgtgt tcgagatgtc
      601 gtcgaggccg aaggagagcc cgaatgccaa cagcttcccg accgtgaccg agtcgagcgc
      661 ggtccactcc ggcacgctgg ccttcgtcag ctcgagcgcg ccgtactccg acggcagcgg
      721 gttggcggcg atccaggcgt tgacaccttc ggcgtacgcg tcgagcgccg cgcgagtctc
      781 cgccgacagc gcatcgagcg agcgcacggc cgcacgccgg agccccagcg tgcgaagctg
      841 gacgtcgccg gcgatcgcac tcgggccgag cagctcggcg agcctgcccg acgcctgccg
      901 ccggctctgg tccatctgga agaggcgatc ggacgcgtgc agatagccct gcgtgaagta
      961 cgcgtcgtgc gcgttgttcg cgtggatctg cggtacgccc agcgtggtgc gggtcatgtc
     1021 ggcgggctgc cggagtcccg gcacacgcaa ccgctcagct cccgccgcac ccggcagcgc
     1081 cagcaccagc accgcagcga gagcaacaac gaccggcgtc cttgaccgca tgcgggaatc
     1141 ctcctcctcc ggagcagcgc gcgccccttg acacgagcgt tcgcctcagc agtgccgtga
     1201 tcgtctcaca gcgtggaagt cgtcgccacg ccggccccag actccgcggc gcgtcgccct
     1261 cgcgcgccct cagcgcgctc tgaagcggcg gcccgggaga agaagggccc tgatctcggt
     1321 gttgtcgatg tcctgcaggt agatcgaggt gacgccgagg ttgtggccca gctggcgttg
     1381 gatgacgatc agcggcacgc cctcgcgggc catctcgacg gcgtgcgcgt ggcggagctg
     1441 gtgtggcgca aagcgtcgcc gcacgccggc ctcgcgggcg acgcggcgca gctcggtgcg
     1501 ggcggcggca tcgagcagca gctcggacat aacccctact cgggagttgg aaacgcatcc
     1561 agcctgctcc ccgccacgag ctgtgcgccc gccgcccgag cacggccgtt tacacagagc
     1621 cggcgcctcg ccgaggcgaa tcaattgccg cgaaacgggc ctgaagatcg ccgccgggac
     1681 ttaggcgaca gcctcgcgcg attgcgagcg tgcgcggcgg cgggcgtcgt cgtgccgtgt
     1741 tacgtcatac gggcggacgg acacacgcgc ggacgctgat cttgtcgggc tcgacgatcg
     1801 tcaccggatg gctgcatcgg gcgctaccgc gcggcagggt gggtggtcgt caggccgagt
     1861 ggcagcggtg gcgcggcggt tgtggcgccg agtgcgagcc gtgccgcctg gatgcccgac
     1921 tcggcgaccc acagcatcgc cgccccgggc tgggtccact ggccggcgag cagcaggccg
     1981 gacacgggcg tcgtgggggc caggcgccgt aggcccgtct gtgccgggga gttcatccag
     2041 ccgtagatcg gacccatccg atgcaccttc gggtgtgatg ccggcgcctg gtcgccggcc
     2101 ggttcggcga acctgatgtg ctggcgcagg cccggcagca cgtcttcggc gtagctcagc
     2161 agatcgtcgg cgatccgccg gtcgtcgtgt ggcgcctcgc cggactcacg cgccgcgggc
     2221 ccctgcacca tgaccacatg ctcgcctgcc ggggccaggg tcggatcggt gagggagggg
     2281 atcaccacat gcgctgcctg gatgcgtgcg cgcagcgcat cggcgaagac gcgttccagg
     2341 tcccaggtgc gcgccacgga ggtgtcgtgg cgtgcgccga gcgctcgtgc gtcgaggtcg
     2401 gtgacgacgt ggatggagac ggtcgagggc gagagctcgc gcgcgcggag ccttcgcagg
     2461 aagcgtgccg gcaggcgctc ggcgcccacg agatcctcga aggtcgtgcg cgcgtcgatt
     2521 gccgagacga cggtgggtgc cgtgatgcgc tgggcgtcgt cgagctcgac gcccgtgacg
     2581 cgcccgtcgt cgctgaggat gcgggcaacg cgcgtgccga ggagcagttc gccgccgtgc
     2641 tcctcgagtc cggccacgag cgcgtcgacg agtcgctgga agctgccgcg gcagtagtag
     2701 gcgccgtcct cgacgtacgt gcccatcatc accgcccagg ccagaaacga cgcgtgcgaa
     2761 ggcggggcgc cgatccatcc ccacgacagg gtggcgtaca gcgccttcag ccgcggatcg
     2821 ctcagctcgc ggtcgagcat ctggcgcagc gtcgccgtgc catagcgcaa tagggtgcgc
     2881 gagcgcagcg gcgcccgcgc gagatcggat acacgcggcc gcatcggcca gctcagcgtc
     2941 tcgcggtaga gctcgcagct gagctctgcc agccgacgaa gcccgcgcgc ctccgccggg
     3001 aagtggcgca gatgcgcctc cagaaacgct tcccggccgc acgggaccgc caactcgaac
     3061 gcgggatagc gcgccacgta gaacgggtca tcgacgcgta ggaactcaca ccgctcgcgg
     3121 acgccgagtt cgcgcaggac cgcgtcgatc acgccctgcc cgaatggccc gttcggctca
     3181 cagctcgtcg tcagatgatc ggcacgatcg aagacgtacg gcccgtgacg cagcgcacgc
     3241 gcgtacccgc ccggccgctg gtcggcctcg acgacgagca cgcgcttgcc ggcgtgcgcc
     3301 agcagcg
//
LOCUS       DASSYW010000596         2357 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_816414, whole genome shotgun sequence.
ACCESSION   DASSYW010000596 DASSYW010000000
VERSION     DASSYW010000596.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2357)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2357)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2357
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_816414"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1846)
                     /gene="purL"
                     /locus_tag="VFN38_09545"
     CDS             complement(<1..1846)
                     /gene="purL"
                     /locus_tag="VFN38_09545"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurL"
                     /protein_id="HET9012044.1"
                     /translation="MTVTARPGDPTITPALIAEHGLTTDEYDRLVAMLGRTPAFTELG
                     IVSALWSEHCSYKHSRPLLKTLPTKASYVLQGPGENAGVIAIGDGLAVAFKIESHNHP
                     SAVEPYQGAATGVGGILRDVFTMGARPIALLNSLRFGSLDSARVRYLFAGVVKGIGDY
                     GNCVGIPTVAGEIVFDPAYEGNPIVNAMCVGLLKEEELMRAVAEGIGNPIIAVGARTG
                     RDGIHGASFASEDLSEASEAKRPRVQVGDPFTEKLLLEASLELIHSGHIVAIQDMGAA
                     GLTSSSAEMAARGDVGVVIDTLKVPAREEGMTPYELLLSESQERMLVVAKKGHEENVR
                     AILEKWDLTAAVIGEVIAEPVYRVVEGDRVVAEFPGIRLVTDCPTYEPEARESADVKS
                     RRARDPHAVPERAEEADPLWTLERLLLSPTIASKRWVYQQYDHTVRTSTVVGPGGDAA
                     VVRIRGTDKAIALKTDCNGRYVFLDPKVGAQIAVAEAARNVACVGGRPMAITNNLNFG
                     NPKKPEVYFQLREAVAGMREACEVLGTPVTGGNVSLYNENPTGAVYPTPVIGMVGLVE
                     SLAHVTRSAFTTDGDAIVLLGDNTDELGGSEYLQRTHDEVIGAPPRVDL"
     gene            complement(1843..>2357)
                     /locus_tag="VFN38_09550"
     CDS             complement(1843..>2357)
                     /locus_tag="VFN38_09550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012045.1"
                     /translation="ALLAQTENVVSPGMTRAQVVAALGAPATQRTAAEYTYMFYANSC
                     GRECGMNDLVILKHDSVSDAIFRSPNRHYTGTSSSPAEAWPTVATRRARPAAKPMTVK
                     KSEPAKATAKPEAAKPAADKAAAPAPLKPPARATDVTPSIPVQKPTIPPAPAKTAPAK
                     TTAPDKKTPG"
BASE COUNT          314 a          793 c          849 g          401 t
ORIGIN      
        1 ggagatccac gcgcgggggc gcgccgatca cctcgtcgtg ggtgcgctgg agatactcgc
       61 tgccgcccag ctcgtcggtg ttgtcaccga ggaggacgat ggcgtcgccg tcggtcgtga
      121 aggccgagcg cgtgacgtga gcgagcgact ccacgaggcc caccatgccg atgacgggcg
      181 tggggtacac ggctcccgtg ggattctcgt tgtagagcga cacgttgccg cccgtgaccg
      241 gcgtgccgag cacctcgcac gcctccctca ttcccgccac cgcctcacgg agctggaagt
      301 agacttccgg cttcttcgga ttgccgaagt tgaggttgtt ggtgatggcc atggggcggc
      361 cgccgacgca ggcgacgttg cgcgccgctt ccgcgaccgc gatctgcgcg ccgaccttcg
      421 gatcgaggaa gacgtaccgg ccgttgcagt cggtcttgag ggcgatcgcc ttgtcggtgc
      481 cgcggatgcg cacgacggcc gcgtcgcccc cggggccgac gacggtgctg gtacggacgg
      541 tgtgatcgta ctgctggtag acccagcgct tgctggcgat cgtcggcgac aggagcagcc
      601 gctcgagcgt ccagagtgga tccgcctcct cggcgcgttc gggcacggcg tgcggatccc
      661 gcgcgcggcg actcttcacg tccgcgctct ctcgggcctc gggttcgtac gtggggcagt
      721 cggtcacgag ccggatgccg gggaattcgg cgacgacgcg atccccctcg acgacgcgat
      781 acaccggctc ggcgatcacc tcgccgatga cggcggcggt gaggtcccac ttttccagga
      841 tggcgcggac gttctcctcg tgccccttct tcgccacgac gagcatgcgc tcctgcgatt
      901 cgctgaggag cagctcgtag ggcgtcatcc cttcttcgcg cgccggcacc ttcaacgtgt
      961 cgatcaccac accgacgtcg ccgcgcgcgg ccatctcggc cgacgacgag gtgagccccg
     1021 cggcccccat gtcctggatg gccacgatgt ggccgctgtg gatcagctcg aggctcgcct
     1081 ccagcagcag cttctcggtg aaggggtcgc ccacctgcac gcgcggccgc ttggcctcgc
     1141 tcgcctccga gagatcctcc gacgcgaagg aggcgccatg gatgccgtcc cgccccgtac
     1201 gcgcgcccac cgcgatgatc gggttgccga tcccctccgc cacggcgcgc atcagctcct
     1261 cttccttgag cagccccacg cacatcgcgt tgacgatcgg attgccctcg tacgcgggat
     1321 cgaacacgat ctcccccgcc acggtgggaa tgccgacgca gttgccgtag tcgccgatcc
     1381 ccttcaccac gccggcgaag agatagcgca cccgcgccga gtcgagcgag ccgaatcgca
     1441 gcgagttgag cagggcgatg ggacgcgcgc ccatcgtgaa gacgtcgcgc aggatcccgc
     1501 cgacgcccgt cgcggcgccc tgatacggct ccaccgcgga cggatgattg tgcgactcga
     1561 tcttgaacgc gacggcgagc ccgtcgccga tcgcgatgac gccggcgttc tcgccgggtc
     1621 cctggagcac gtatgacgcc ttggtgggta gcgtcttgag cagggggcgc gagtgcttgt
     1681 acgagcagtg ctcgctccag agcgcgctga cgatccccag ctcggtgaag gccggcgtgc
     1741 ggccgagcat ggcgacgagg cggtcgtact cgtcggtcgt gagcccatgc tcggcgatca
     1801 gcgccggagt gatcgtggga tcgccgggtc gtgcggtaac ggtcatccgg gcgttttctt
     1861 gtcgggtgcg gtcgtcttgg cgggcgcggt cttggccggc gcggggggaa tcgtcggctt
     1921 ctgcacgggg atcgagggcg tgacgtcggt cgccctggcc ggcggcttca ggggcgcagg
     1981 cgcggcggcc ttgtcggcgg ccggcttcgc cgcctcgggc ttggccgtcg ccttcgcggg
     2041 ctcggacttc ttcacggtca tgggcttcgc ggcagggcgc gcgcggcgag tcgccacggt
     2101 gggccaggct tcggcgggcg agctgctcgt gccggtgtag tgacggttgg gcgagcggaa
     2161 gatcgcgtcg ctcacgctgt cgtgcttgag gatgacgaga tcgttcatgc cgcattcccg
     2221 gccgcaggaa ttcgcgtaga acatgtacgt gtactcggcg gcggtgcgct gggtggccgg
     2281 cgcaccgagc gcggcgacga cctgggcgcg ggtcatgccc ggcgagacga cgttctcggt
     2341 ctgcgcgagc agcgccg
//
LOCUS       DASSYW010000597         2927 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_37444, whole genome shotgun sequence.
ACCESSION   DASSYW010000597 DASSYW010000000
VERSION     DASSYW010000597.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2927)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2927)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2927
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_37444"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1198
                     /locus_tag="VFN38_09555"
     CDS             <1..1198
                     /locus_tag="VFN38_09555"
                     /inference="COORDINATES: protein motif:HMM:NF028007.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051219 - phosphoprotein binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HET9012046.1"
                     /translation="GSGPMTIRRAAPSAVVRVNGVLLGAEPTPLMHGDKLEIGGLELR
                     FADDAKGGATQFVNASDMAALAGTRRAGASRPTAASGGRLVSLVDGKEYTVPSGGLVF
                     GREASCDVVVAQNEVSRRHAEIAPDGQGYVVRDLSSNGVYVNGERVQGSHRMARADVV
                     RIGTEEFRFYADVLAASATPAVSQPASAPPSAAPAPAPAPAPASAPAEPESARAALMS
                     APTPLAQPRHDDPRPVLATLESRNEGPAKGTKYPLRTPLAHVGRGAHNDVRLQDDSVS
                     ETHAKLQRRDDGWYVVDMGSTNGTYVAGTRITGERRLDGSPDLRFGGMKMRFAEAGAA
                     VPTETDAKGTRAIASVERPRRAAAEPSPAAAPVEGARGGIPAIVWVLLVLVIGAAAFF
                     LLQGRA"
     gene            1195..1983
                     /locus_tag="VFN38_09560"
     CDS             1195..1983
                     /locus_tag="VFN38_09560"
                     /inference="COORDINATES: protein motif:HMM:NF033484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004722 - protein serine/threonine
                     phosphatase activity [Evidence IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Stp1/IreP family PP2C-type Ser/Thr phosphatase"
                     /protein_id="HET9012047.1"
                     /translation="MKLIHAARTDVGMIRSGNEDNFSVDASATRGIFIVADGMGGHAA
                     GEVASEMAVQIVQRELAGVKNLDGDDVVKLVSSALKRANRAIHDRTLTEVDKQGMGTT
                     ASVLLVSGGRYLIGQVGDSRVYLLRDGGFAQLTKDHSYVQEQVDAGFLTPEQARYHPY
                     SNVITRCVGAGQDVEPDIYRGEVRAGDLYLVASDGLTGMVDDRRLAQLLASRADPERK
                     VQALISEANGRGGLDNITAIIVQVLDTGPGSDDPNLTTESRSVG"
     gene            1976..2155
                     /locus_tag="VFN38_09565"
     CDS             1976..2155
                     /locus_tag="VFN38_09565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012048.1"
                     /translation="MADESVASLAQLYLGNILYAIELAAASLEAEGKPDHAAFYRGIA
                     RKLAEAHGRERDAAG"
     gene            complement(2233..>2927)
                     /locus_tag="VFN38_09570"
     CDS             complement(2233..>2927)
                     /locus_tag="VFN38_09570"
                     /inference="COORDINATES: protein motif:HMM:NF039904.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012049.1"
                     /translation="VVTDPERGGPTLGISEKGLSALESLLFAKYQMYRNVYWHHAVRS
                     ATAMYKRLVDGALRAGSLSAETLAGFTDEGLLHELALRAPSPLLAALRERRLYKRVFE
                     CPAAELPADGGEWIADDRALVVAVEDQLARELGLAPGELLLDYPAKTQMLGLDIPVQR
                     RDGGVKRLTAAGWEGAINLPKLSEELYRSARWLRVFACRRVDLRREAIMLLATLPSPE
                     VRERLAEGRVLS"
BASE COUNT          407 a         1059 c         1093 g          368 t
ORIGIN      
        1 cggcagcggc cccatgacca tccgccgcgc cgccccctcc gccgtggtgc gggtgaacgg
       61 cgtgctgctc ggtgccgagc cgaccccgct catgcacggg gacaagctcg agatcggggg
      121 gctcgagctc cgcttcgccg acgacgcgaa gggaggcgcc acccagttcg tgaacgcgag
      181 cgacatggcg gccctggccg gcacccgccg cgccggcgcg tcgcggccca cggcggcatc
      241 gggggggcgt ctggtgtcgc tggtggacgg caaggagtac acggtccctt cgggcgggct
      301 ggtgttcgga cgcgaggctt cgtgcgacgt cgtcgtggcg cagaacgagg tgtcgcgccg
      361 ccatgcggag atcgccccgg atggccaggg ctacgtcgtt cgcgacctga gctccaacgg
      421 tgtgtacgtg aacggcgagc gggtacaggg atcgcaccgc atggcgcgcg cggacgtcgt
      481 gcgcatcggc acggaggagt tccgcttcta cgccgacgtg ctggcggcga gcgccacccc
      541 ggcggtgtcg cagccggcga gcgctccccc ctccgccgcc cccgcccccg cccccgcccc
      601 cgcgccggcg tcggctccgg cggagccgga gtcggcgcgc gctgccctga tgtcggcgcc
      661 caccccgctg gcccagcccc gccacgacga cccgcgtccg gtgctggcga cgctcgagag
      721 ccggaacgaa gggccggcga aggggacgaa gtatccgctg cgcacgccgc tggcccacgt
      781 gggccgcggc gcccacaacg acgtgcggct ccaggacgac agcgtgagcg agacccacgc
      841 gaagctccag cggcgcgacg acggctggta cgtggtggac atgggctcca ccaacggcac
      901 ctacgtggcc ggcacgcgca tcacggggga gcggcggctc gacggctcgc cggacctgcg
      961 gttcggcggc atgaagatgc ggttcgccga agccggcgcg gcggtcccca cggagacgga
     1021 cgccaagggg acccgcgcca tcgcctcggt ggagcggccg cggcgggcgg cggccgagcc
     1081 gtcccccgcc gccgccccgg tcgagggggc ccgcggcggc atcccggcca tcgtctgggt
     1141 gctgctcgtc ctcgtcatcg gggccgcggc cttcttcctg cttcaaggac gcgcgtgaag
     1201 ctcatccacg cggcccggac ggacgtcggc atgatccgct ccggcaatga ggacaacttc
     1261 agcgtcgacg cgtcggccac gcgggggatc ttcatcgtcg cggacgggat gggtgggcac
     1321 gccgcggggg aggtggccag cgagatggcc gtgcagatcg tccagcgcga gctcgccggc
     1381 gtgaagaacc tcgacggcga cgacgtggtg aagctggtct cctcggcgct caagcgcgcg
     1441 aaccgggcga tccacgaccg cacgctcacc gaggtggaca agcaggggat gggcaccacg
     1501 gcgtcggtgc tgctcgtctc gggcggacgg tacctcatcg gccaggtcgg cgactcgcgc
     1561 gtctacctgc tgcgcgacgg cggcttcgcc cagctcacca aggaccactc ctacgtgcag
     1621 gagcaggtgg acgccggctt cctgaccccg gagcaggcgc gctaccaccc gtacagcaac
     1681 gtgatcacgc ggtgcgtcgg ggcggggcag gacgtggagc cggacatcta ccgcggcgag
     1741 gtgcgcgccg gcgacctgta cctggtggcg agcgacggcc tgacggggat ggtggacgac
     1801 cgccgcctcg cccagctgct cgcgtcgcgc gccgatccgg agcgcaaggt gcaggcgctg
     1861 atctcggagg ccaacggccg cggtgggctc gacaacatca ccgcgatcat cgtccaggtg
     1921 ctcgacaccg gccccggatc ggacgacccg aacctcacga cggagtcgcg gtcggttggc
     1981 tgacgagtcg gtggcgtcgc tggcgcagct ctacctcgga aacatcctgt acgcgatcga
     2041 gctggcggcc gcctcgctcg aggcggaggg gaagccggac catgccgcct tctaccgcgg
     2101 catcgcgcgc aagctggccg aggcgcacgg gcgggagcgg gacgcggccg gctgagcacg
     2161 ggccgggctg gtcgggggtg acccggcgcc gggccgcctg ctgccccggc ttccgggtct
     2221 cgggcgacgt cgtcagctca ggacccgccc ctccgccagc cgctccctca cttccgggga
     2281 cggaagcgtc gcgagcagca tgatcgcctc gcggcggagg tccacgcggc ggcaggcgaa
     2341 cacgcgcagc cagcgcgccg accggtagag ctcttccgac agcttcggga ggttgatcgc
     2401 cccctcccag ccggcggcgg tgagccgctt caccccgccg tcgcgccgct gcacgggaat
     2461 gtcgaggccg agcatctggg tcttggcggg atagtcgagc agcagctcgc cgggggcgag
     2521 cccgagctcc cgcgcgagct ggtcttccac cgccaccacc agcgcgcggt cgtcggcgat
     2581 ccattcgccg ccgtcggccg gcagctccgc ggccggacac tcgaacacgc gcttgtacag
     2641 ccgccgctcg cggagggcgg cgagcagggg gctgggcgcg cggagcgcga gctcgtgcag
     2701 cagcccctcg tcggtgaacc cggcgagcgt ctcggcgctc agcgagccgg cgcgcagcgc
     2761 gccgtccacc aggcgcttgt acatcgccgt cgcgctgcgg accgcgtgat gccagtacac
     2821 gttgcgatac atctggtact tggcgaacag cagcgattcg agcgccgaga gtcccttctc
     2881 cgagatgccg agcgtcggtc cgccgcgctc gggatcggtg acgacga
//
LOCUS       DASSYW010000598         2278 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_534905, whole genome shotgun sequence.
ACCESSION   DASSYW010000598 DASSYW010000000
VERSION     DASSYW010000598.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2278)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2278)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2278
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_534905"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..684
                     /locus_tag="VFN38_09575"
     CDS             <1..684
                     /locus_tag="VFN38_09575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012050.1"
                     /translation="AITESPPALGRPRSLATEAEIARRIEAATDALDGAPPDVARQAD
                     AFIARVAALEARLAARGVSLADVRVSPALRHGARFVLRESLVVVDSFPIALLGRVMHW
                     IPLRAARALAMRPLANDPSRDQPAMRTIVLGLAFVLLWYVAQGALVAHWFGWLAGAAW
                     LVVLFLSAQVDFHLRDRLRRAWRRARTYLALRRDPALRAQALAEIDAVVSDALALESA
                     LLAPLTATR"
     gene            complement(681..1001)
                     /locus_tag="VFN38_09580"
     CDS             complement(681..1001)
                     /locus_tag="VFN38_09580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012051.1"
                     /translation="MKASDVPPPSSAPPPYREFRSRREGMLHAMDGGLWMHRHVWKGR
                     PMAHLVSTDKARLLAYGAAVGIPAERLQYKPLKDPRTGVRRDAWHWDLGGPFLPPPVP
                     RDRR"
     gene            complement(998..>2278)
                     /gene="polA"
                     /locus_tag="VFN38_09585"
     CDS             complement(998..>2278)
                     /gene="polA"
                     /locus_tag="VFN38_09585"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HET9012052.1"
                     /translation="VVWQLEQRFRPQLEAQQIHELYRDVEVPLVGVLADLEWEGIQID
                     RALFASLKERFARERQRVEQEIYASAGGEFNINSNPQLREVLFERLKLPILKKTATGP
                     STDATVLQELAEAGHELPVLLMEYRELSKLESTYIDALPALVNPRTGRVHTSYNQTVA
                     ATGRLSSTEPNLQNIPIRRELGRDIRRGFVPRTGWLLLAADYSQIELRLLAHLSGDPL
                     FVQAFQSGGDIHRQTAALIFDVPLESVTSEMRSRAKTINFATIYGQGPHALSRQLKIA
                     HAEAKAFIETYFVRFSKVREFLDSTVEYAREHGYVETIFKRRRYIPELRDRNFNIRAF
                     GERTAANSPIQGSAADLIKIAMIRIRDRLDAERFAARMLLQVHDELVFEVPADELPAV
                     TALVRHEMEHAASLAVPLVVDVGAGHNWLETKMG"
BASE COUNT          308 a          817 c          787 g          366 t
ORIGIN      
        1 gcgatcacgg aatcgccccc cgcgctcggc cgcccgcggt cgctggcgac cgaggccgag
       61 atcgcacggc gcatcgaggc ggccactgac gcgctcgacg gagcgcctcc ggatgtggct
      121 cggcaggccg acgcgttcat cgcgcgcgtc gccgcactgg aggcccggct ggccgcccgc
      181 ggcgtgagcc tggcggacgt gcgagtctcg cccgcgcttc gccacggtgc ccgcttcgtg
      241 ctgcgcgaga gcctggtcgt cgtggacagc ttccccatcg ccctgctcgg gcgcgtcatg
      301 cactggatcc ccctgcgcgc ggcgcgtgcg ctggccatgc gccccctcgc gaacgacccc
      361 tcccgcgatc agccggccat gcgcacgatc gtgctcgggc tggcgttcgt gctgctctgg
      421 tacgtcgcgc agggtgcgct cgtggcgcac tggttcgggt ggctcgcagg ggcggcctgg
      481 ctcgtcgtgc tgttcctgtc ggcgcaggtc gacttccacc tgcgcgaccg gcttcgccgc
      541 gcctggcggc gcgcgcgcac gtatctcgcg ctccgccgcg atccggcact gcgcgcccag
      601 gcgctggccg agatcgatgc cgtcgtgagc gacgccctcg cgctcgaatc cgcgctcctc
      661 gcgccgctca ccgcgacccg ctaacgccgg tcgcggggca ccggcggcgg caggaaggga
      721 ccgccgagat cccagtgcca cgcgtcgcga cgcacccccg tgcgtggatc cttgagcggc
      781 ttgtattgca gtcgctccgc tggaatgccg accgcggccc cgtacgcgag cagccgcgcc
      841 ttgtcggtgg agacgaggtg cgccatcgga cgtcccttcc agacgtggcg gtgcatccac
      901 aacccgccgt ccatggcgtg gagcatcccc tcgcgacgcg agcggaactc gcggtagggc
      961 ggtggcgcgc tcgagggcgg cggcacgtcg ctcgccttca tcccatcttc gtctcgagcc
     1021 agttgtgtcc ggcgccgacg tcgaccacca gcggcacggc gagcgaggcg gcgtgctcca
     1081 tttcgtgacg aacgagcgcc gtgaccgccg gcagctcgtc cgccggcacc tcgaacacca
     1141 gctcgtcgtg cacctggagc agcatgcggg cggcgaagcg ttccgcgtcg agccggtcgc
     1201 ggatgcggat catcgcgatc ttgatgaggt ccgcggcgga tccctggatc ggcgagttgg
     1261 ccgcggtgcg ctcgccgaac gccctgatgt tgaagttgcg gtcgcgcagc tccgggatgt
     1321 agcgccgccg cttgaagatc gtttccacgt agccgtgctc gcgcgcgtac tcgaccgtgg
     1381 aatcgaggaa ctcgcgcacc ttcgagaagc ggacgaaata ggtctcgatg aaggccttcg
     1441 cctcggcgtg cgcgatcttc agctggcgcg agagcgcgtg cggtccctgg ccgtagatcg
     1501 tcgcgaaatt gatcgtcttg gcgcgcgagc gcatctccga ggtcacggac tcgagcggca
     1561 cgtcgaagat gagcgccgcc gtctgccggt gaatgtcgcc ccccgactgg aacgcctgca
     1621 cgaacagggg gtcgcccgac aggtgcgcca gcaggcgcag ctcgatctgc gaatagtcgg
     1681 cggccagcag cagccagcct gtgcgcggga cgaagccccg gcggatgtcg cgcccgagct
     1741 cgcgccgaat cgggatgttc tgcaggttcg gctcggtgga cgacagacgt cccgtggcgg
     1801 ccacggtctg attgtacgac gtgtgcacgc gacccgtgcg cggattcacg agcgccggca
     1861 gcgcgtcgat gtacgtgctc tccagcttgg acagttcccg gtattccatg agcagcaccg
     1921 gcagctcgtg ccccgcctcg gcgagctcct gcagcaccgt cgcgtccgtc gacggaccgg
     1981 tcgccgtctt cttgaggatg ggcagcttga gccgctcgaa cagcacttcg cgcagctgcg
     2041 ggttcgagtt gatgttgaac tcgccccccg cgctcgcgta gatctcctgc tccacgcgct
     2101 ggcgctcgcg cgcgaaccgc tccttgagcg aggcgaacaa cgcgcggtcg atctggatcc
     2161 cctcccattc cagatcggcg agcaccccga cgagcggaac ctcgacgtcg cgatagagct
     2221 cgtggatctg ctgcgcctcg agctggggcc ggaaccgctg ctccagctgc cacacgac
//
LOCUS       DASSYW010000599         2584 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1365883, whole genome shotgun sequence.
ACCESSION   DASSYW010000599 DASSYW010000000
VERSION     DASSYW010000599.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2584)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2584)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2584
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1365883"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(181..2334)
                     /locus_tag="VFN38_09590"
     CDS             complement(181..2334)
                     /locus_tag="VFN38_09590"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HET9012053.1"
                     /translation="MSQPLPALLVVDDEDTNRNLLARLFESKGFQVHTATSGAEALEH
                     VRTSRTDLVLLDMNMPGLTGFDVLKKLRLTHTPGALPVVMVTGFGESHDLVQALELGA
                     NDYVTKPIDFPVVLARIKTQLARQQAERALKESEERYALAVKGANDGIWDWRFDINDG
                     YFSPRWRSVLGYDENALLTSLNAWYDRVHPNDLGPLKAALEEHLVGSTTHFEYEHRVQ
                     SSPDSYRWVLARAVAVRNAHGHAVRVAGSLTDITEGKVADALTGLPNRVLLMDRLGRL
                     IEHAKRHPEFEVVVMFLDLDRFKVINDSLGHHAGDELLVQAARRLDGCLRSTDTVARV
                     AAGRTSRDDLMTGSTLGRMGGDEFVVVLGGLRQSDGAPKVADRLHGAFSQGFRVKGHE
                     VFVSLSIGIAASMDGNTTPDDLLREADMAMYRAKGLGPSRTEIFTPDMRVEARVRLQN
                     DTDLRHAQSRNEFELWYQPIVSLETGKVDTVEALLRWRHPTRGFISTQQFIATAESTG
                     LIVPVGYWVLERACADLRRWEVVDPRSSEVFVGVNLSAKQLVVPDLVTRIEEIVAQAG
                     VRPSRIEFELTESSVMVDPELAQRQLEALKRKGFRLSIDDFGTGHSSLSYVHRFPVDR
                     IKVDRSFLLRARTEHETDVVMRAIIDLGLQLGLEVVAEGVETDVELAKLQGIGCKLGQ
                     GYLFAPPRASDSVPPLFRGPVQAAFRELLQPVPKV"
BASE COUNT          402 a          866 c          887 g          429 t
ORIGIN      
        1 gacgtgatcg tgctgggcgg cggcctgtcg aacatcgatc ggctgtatga gaacgtgccg
       61 ccgctgtggg cgccctacgt gttctcggac accgtgacga cgcggctcgt gaaggccgcg
      121 cacggggatt cgagcggcgt ccgcggcgcg gcgtggttgt gaaatgcgcc gcaccagccg
      181 tcagactttc ggcaccggct gcaacagctc tctgaacgcc gcctgcacgg ggccgcggaa
      241 gagcggcggc acgctgtcgc tcgcgcgagg cggcgcgaac aagtacccct gaccgagctt
      301 gcagccgatc ccctggagct tcgcaagctc cacgtcggtc tcgacgcctt ccgccaccac
      361 ttcgagcccg agctgcaagc cgagatcgat gatcgcgcgc atcaccacgt cggtttcgtg
      421 ctcggtgcgc gcccgcagca ggaacgatcg atccaccttg atgcggtcca ccgggaagcg
      481 gtgcacgtag ctgagcgacg agtgcccggt gccgaagtcg tcgatgctca ggcggaagcc
      541 tttgcgcttg agcgcctcga gctgccgctg cgccagctca gggtccacca tcacgctgct
      601 ctcggtgagc tcgaactcga tgcggctggg ccgcacgcct gcctgcgcca cgatctcctc
      661 gatgcgcgtc acgaggtccg gcaccacgag ctgcttggcc gagaggttga cgccgacgaa
      721 cacctccgac gaccgcggat cgaccacttc ccagcgccgc agatcggcgc aggcgcgttc
      781 cagcacccag tagcccaccg gcacgatgag cccggtgctc tcggcggtgg cgatgaactg
      841 ctgcgtggag atgaagccgc gcgtcgggtg gcgccaccgc agcagcgcct ccaccgtgtc
      901 caccttgccg gtctcgagcg agacaatcgg ctggtaccac agctcgaact cgttgcggct
      961 ctgcgcgtgg cgcaggtccg tatcgttctg cagccgcacg cgcgcctcga cgcgcatgtc
     1021 gggcgtgaag atttccgtcc gcgacggccc cagccccttg gcgcggtaca tcgccatgtc
     1081 ggcctcgcgc agcaggtcgt ccggcgtcgt gttgccgtcc atgctggcgg cgatgccgat
     1141 gctgagcgac acgaacactt cgtgcccctt cacgcggaac ccttgcgaaa acgcgccgtg
     1201 cagccggtcg gcgactttgg gcgcgccgtc ggattgccgc agcccgccga gcaccaccac
     1261 gaactcgtcg ccgcccatgc ggcccagcgt cgagcccgtc atcaggtcgt cgcgcgaggt
     1321 gcgtcccgcg gcaacccgcg ccaccgtgtc ggtgctgcgc aggcagccat cgagccgccg
     1381 cgcggcttga accagcagtt cgtcgccggc gtgatggcca aggctgtcgt tgatcacctt
     1441 gaagcggtcg agatccagga acatcacgac cacttcgaac tccggatgcc gcttggcgtg
     1501 ctcgatcagc cggccgaggc gatccatcag cagcacgcgg ttcggcaggc ccgtgagggc
     1561 gtcggccacc ttgccttcgg tgatgtcggt cagcgagccg gcgacgcgca cggcgtggcc
     1621 gtgggcattg cgcacggcca ccgcgcgggc gagcacccat cgatacgagt cgggactgct
     1681 ctggacccgg tgttcgtact cgaagtgcgt ggtcgaaccc accaggtgct cttcgagcgc
     1741 ggctttgagc ggccccaggt cgtttgggtg cacgcggtcg taccacgcgt tgagcgacgt
     1801 caggagcgcg ttctcgtcgt agcccaggac ggatcgccag cggggcgaga agtagccgtc
     1861 gttgatgtcg aagcgccagt cccagatacc gtcgttggcg cccttcacgg ccagcgcgta
     1921 gcgctcctcg ctttccttga gcgcgcgctc cgcctgctgc cgcgcgagct gcgtcttgat
     1981 gcgcgccagg accaccggaa agtcgatcgg cttggtgacg taatcgttgg cgccgagctc
     2041 gagcgcctgg accaggtcgt ggctttcgcc gaagccggtc accatcacga cgggcagcgc
     2101 cccgggcgta tgcgtgaggc gcagcttctt caacacgtcg aagccggtga ggcccggcat
     2161 gttcatgtcg agcagcacca gatccgtccg cgacgtgcgc acgtgttcga gcgcctccgc
     2221 accggaggtc gcggtgtgta cctgaaagcc tttgctctcg aagaggcggg cgagcaggtt
     2281 gcggttggtg tcttcgtcgt cgacgacgag gagcgctggc aaaggttgcg acattcgtgc
     2341 cgtgcggtta atcggctacg gcccggcggt cttgaacgtg cgggcgcacg gctgcacgcg
     2401 gatgcagcgt ctattgagcg acgcgtgctg tgccgaagcg gagcggagcg gaccgagcga
     2461 ggggttaggt gcggcggcgc gcgcgaactc taagggcaag tgccgtaaga ccgatgccga
     2521 ggagcaagag catggccggt tcgggcacga cgagtacttc cgcggcggct gatttaggac
     2581 tcag
//
LOCUS       DASSYW010000600         2382 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_397898, whole genome shotgun sequence.
ACCESSION   DASSYW010000600 DASSYW010000000
VERSION     DASSYW010000600.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2382)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2382)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2382
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_397898"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            25..897
                     /locus_tag="VFN38_09595"
     CDS             25..897
                     /locus_tag="VFN38_09595"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HET9012054.1"
                     /translation="MSRPIDVLHLGRDRVICAYEIGGLIVDPGPASCVETLIDRLGPV
                     EPRALLLTHIHLDHAGATGTILRRHPGIRVAVHERGARHLVDPSKLVESASRLYGDLM
                     ETLWGEVAPVPERNLIVLSGGETIEAGGRSFEVEYTPGHASHHVCFFDRSSGIAFVGD
                     TAGVCVDGGYVLPPTPPPDIDVELWLESIQKIDRWRPSTLFLTHFGPVTSGVSAHLQA
                     LADNLQRSAALVRESLVTEGTDEERKAQYEARMMAELRAQMPEELARAYETAAGFRMS
                     WPGLARYWRKKVGS"
     gene            complement(894..1304)
                     /locus_tag="VFN38_09600"
     CDS             complement(894..1304)
                     /locus_tag="VFN38_09600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012055.1"
                     /translation="MNRSAAAPSTQRDRIGSRRRVAIPGRLTWRDATGTLRFTSVVTR
                     DISESDAFVECQMPASIPLYRLVHFQVERSAQDRTDLPAVLRRGKLLSAVYRVGPYAP
                     ATGTPQGYAIRLLSEPAGAAQSARDVEQRIAVAN"
     gene            complement(1501..>2382)
                     /locus_tag="VFN38_09605"
     CDS             complement(1501..>2382)
                     /locus_tag="VFN38_09605"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HET9012056.1"
                     /translation="TGESGTGKDLIARAIHAGSPRRTAAFLPFNCTTMTRDLASSQLF
                     GHRRGSFTGAMTDQPGLIRSAVGGTLFLDEIGDVPLDVQPQLLRFLEQGEILPIGETR
                     PQAIDVRVLAATNADLEQRVAEGKFREDLYYRLSVIRIDVPPLRARREEIPHLSTFFL
                     REACDRLAKPEVSLSSETLEVFARYHWPGNVRQLFNEIQRAVAMTTPGGTIEPEHLSS
                     DLSAQRLAGASTAGAVGGWAPEAGTLAENIEKVERTIIAATLEKTGNNISESARLLGL
                     TRRGLYMKMARLGFAGV"
BASE COUNT          363 a          776 c          843 g          400 t
ORIGIN      
        1 agtgattgta tggtccggga ccctgtgagc cgcccgatcg acgtgctcca cctcggtcgc
       61 gaccgggtga tctgtgccta cgagatcggc gggctgatcg tcgatcccgg gcccgcctcc
      121 tgcgtcgaga cgctgatcga ccgcctcggc ccggtggagc cgcgcgcgct gctcctcacg
      181 cacatccatc tcgaccacgc gggcgccacc ggcacgatac tgcggcggca ccccggcatt
      241 cgcgtcgccg tgcacgaacg gggcgcgcgc catctcgtgg atccgtcgaa gctggtcgag
      301 agcgccagcc gcctctatgg cgatttgatg gagaccctgt ggggcgaggt cgcccccgtg
      361 ccggagcgca atctgatcgt gctcagcggg ggcgagacca tcgaggccgg cggccgatcg
      421 ttcgaggtgg aatacacgcc cggtcacgcg tcgcaccacg tgtgcttctt cgatcggtcg
      481 agcggcatcg ccttcgtggg cgacaccgcg ggcgtgtgcg tggacggcgg ctacgtgctg
      541 ccgccgacgc cgccgcccga catcgacgtg gagctgtggc tcgagagcat tcagaagatc
      601 gatcgctggc ggccgtccac gctgttcctc acgcacttcg ggccggtgac gtccggtgtc
      661 tcggcgcacc tgcaggcgct ggccgacaac ctgcagcgct cagcggcgct cgtgcgcgag
      721 tcgctcgtga ccgagggaac cgatgaagaa cggaaggcgc aatacgaagc gcggatgatg
      781 gcggagctac gggcgcagat gcccgaggaa ctggcgcgag cctacgaaac ggccgccggc
      841 ttccgcatgt cgtggccggg gctggcgcgc tactggcgca agaaggtcgg gtcctagttc
      901 gcgacggcga ttctctgttc gacgtcgcga gccgactgcg cggcgccagc gggttccgac
      961 agcaaccgaa tcgcatagcc ctgcggcgtg cccgtggccg gcgcgtaggg gcccacacgg
     1021 tagacggccg agagcagctt cccgcgacgc agcacggcgg ggagatccgt gcggtcctgc
     1081 gcggagcgtt ccacctggaa gtgcacgagg cgatagagcg gaatcgacgc cggcatctgg
     1141 cattcgacga acgcgtcgct ctcgctgatg tcgcgggtga cgaccgacgt gaagcgcagc
     1201 gtgccggtgg cgtcccgcca ggtcagccga ccgggaatcg cgacacggcg gcggctgccg
     1261 atacggtcac gctgggtcga gggggcggcg gctgagcggt tcatcgaagt cctccaggga
     1321 agcggtcacc cttccctgta tcaagtcccg gacctcggct ggcaccagcg ggcttttccg
     1381 tgcagattct tgtatctcgc tggaaagaaa tgagttgttc tagagtgaac tggcgggacg
     1441 tttcgaggat atggatactt tgtatccact gcccctgtat acttggttac ttggtatccg
     1501 ctacacgccc gcgaatccga gtctggccat cttcatatac aggcctcttc gggtaagtcc
     1561 cagaagccgg gcggactcgg agatgttgtt gccggtcttc tcgagcgtgg ccgcaatgat
     1621 ggtgcgctcc accttctcga tgttctcggc cagggtgccg gcttcgggcg cccagccgcc
     1681 cacggccccc gcggtggacg cgccggccag gcgctgcgcg gagaggtccg acgacaggtg
     1741 ttcgggctcg atggtgccgc caggcgtcgt catcgcgacg gcgcgctgaa tctcgttgaa
     1801 cagctgccgc acgttgccgg gccagtggta gcgcgcgaac acctcgagcg tctccgaact
     1861 cagcgacacc tccggcttgg ccaggcggtc gcacgcttcg cgcaggaaga aggtgctgag
     1921 gtgcgggatc tcctcgcggc gcgcgcgcag cggcggcacg tcgatgcgaa tcacgctcag
     1981 gcggtagtag agatcctcgc gaaactttcc ctcggccacg cgctgctcga gatcggcatt
     2041 ggtggccgcg agcacgcgca cgtcgatcgc ctgcggccgc gtctcgccga tcggcaggat
     2101 ctcgccctgc tcgaggaagc gcagcagctg cggctgcacg tcgagcggta cgtcgccgat
     2161 ctcgtcgagg aagagcgtgc cgccgaccgc cgatcggatc aggcccggct gatccgtcat
     2221 ggcacccgtg aagctgccgc gccggtggcc gaacagctgg ctgctggcga ggtcgcgcgt
     2281 catggtggtg cagttgaacg gcaggaacgc ggccgtgcgc cgtggtgatc cggcgtggat
     2341 ggcgcgcgcg atgaggtcct tgccggtgcc gctctcgccg gt
//
LOCUS       DASSYW010000601         2143 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_74437, whole genome shotgun sequence.
ACCESSION   DASSYW010000601 DASSYW010000000
VERSION     DASSYW010000601.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2143)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2143)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2143
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_74437"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..992)
                     /locus_tag="VFN38_09610"
     CDS             complement(<1..992)
                     /locus_tag="VFN38_09610"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013227.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HET9012057.1"
                     /translation="MIPFVDLQAQYRALKPEIDAAVLKVLDQAAFILGPAVAAFEKDF
                     AAFCGTREAIGVNSGTSALHLALLAAGVGPGDEVITVPYTFVATVAAIEYAGAKPVLV
                     DVEPDYWTMDPARLEAAITPRTKAIMPVHLYGQPADMDPILAIARKHGIPVIEDAAQA
                     HGSEYKGRRCGSMGLLGCFSFYPGKNLGAYGEGGAVVTDDPALAKRIRLLRAWGEEVR
                     YEHKFKAFNYRMDGVQGAVLDVKLRHLEAWTEARRANAAEYGRQLSGTSVKPPVERAG
                     CRHVYHLYPVRLAQRDAWRAALGEAGVQTGVHYPIPVHLQPAYRDLGYSVGDFPV"
     gene            complement(989..2014)
                     /locus_tag="VFN38_09615"
     CDS             complement(989..2014)
                     /locus_tag="VFN38_09615"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HET9012058.1"
                     /translation="MIGIGVIGYGYWGPNLVRNFAECQGAAVRMVCDLRPAQLEQVER
                     RYPGVRTTTTPADVWNDPAVDAVVIATPVQYHFDLALASLRAGKHVLVEKPMTSTSEQ
                     ASRLIEEAAARQLVLMVDHTFVYTGAVRKMRELTESGELGDIYYYDSVRINLGLFQHD
                     VNVLWDLAVHDLSIMDFVLRKQPVAVSATGLAHVLGRPENIAYMTMFFDGSLIAHVHA
                     NWLSPVKVRRTLLSGSRRMLVFDDLEASEKIKIYDRGISLNPSPENVYQMLIGYRAGD
                     MWAPQLAVSEALSVEAAHFVACVRDGATPVTDGEAGLHVVRLLEAATESMAHQGRLVP
                     LGSAVHS"
BASE COUNT          324 a          788 c          701 g          330 t
ORIGIN      
        1 acggggaagt cgccgacgct gtagccgaga tcgcgatacg cgggctgcag gtgcaccggg
       61 atcggatagt gcacgccggt ctggacgccc gcctcgccca gcgccgcgcg ccacgcgtcg
      121 cgctgcgcga gccgcaccgg atacaggtga tacacgtgcc ggcacccggc gcgctccacc
      181 ggcggcttca cggacgtgcc cgacagctgg cggccgtact cggcggcgtt ggcgcggcgc
      241 gcctcggtcc aggcttcgag gtgccgcagc ttcacgtcga gcaccgcacc ctgcacgcca
      301 tccatccggt agttgaacgc cttgaacttg tgctcgtagc gcacttcctc gccccacgcg
      361 cgcagcaggc ggatgcgctt ggccagcgcg ggatcgtcgg tgaccaccgc gcccccttcc
      421 ccgtaggcgc ccaggttctt gcccggatag aagctgaaac acccgagcag ccccatcgag
      481 ccgcagcggc gtcccttgta ttcggagccg tgcgcctgcg ccgcgtcctc gatcaccgga
      541 atgccgtgct tccgcgcgat cgccaggatc ggatccatgt ccgcgggctg cccatacagg
      601 tgcaccggca tgatggcctt cgtgcgcggc gtgatggcgg cctcgagcct ggcgggatcc
      661 atcgtccagt agtccggctc gacgtccacg agcaccggct tcgcgcccgc gtattcgatc
      721 gccgccaccg tcgcgacgaa cgtgtacggc acggtgatga cctcgtcgcc cgggccgaca
      781 ccggccgcca gcagcgccag gtgcagcgcg ctcgtgccgc tgttcacgcc gatggcctcg
      841 cgcgtgccgc agaacgcggc gaagtccttc tcgaacgccg ccaccgcggg gcccaggatg
      901 aacgccgcct gatcgagcac cttcaacacc gcggcgtcga tctccggctt cagggcgcgg
      961 tactgcgcct gcaaatccac gaacggaatc atgagtgcac cgcgctcccg agcggcacca
     1021 gccgcccctg atgggccatc gactcggtgg ccgcttccag caggcgcacc acgtgcaggc
     1081 ccgcttcgcc atccgtgacc ggcgtggcgc cgtcgcggac acaggcgacg aagtgcgccg
     1141 cctcgacgct cagcgcctcg ctgacggcca gctgcggcgc ccacatgtcg ccggcacggt
     1201 agccgatgag catctgatag acgttctccg ggctggggtt cagcgagatg ccgcggtcgt
     1261 agatcttgat cttctcactc gcctcgaggt cgtcgaacac cagcatgcgg cggctgccgc
     1321 tcagcagggt gcggcgcacc ttcaccggcg agagccagtt ggcgtgcacg tgggcgatga
     1381 ggctcccgtc gaagaacatc gtcatgtagg cgatgttttc cggccgcccc agcacgtgcg
     1441 ccagcccggt ggccgacacc gccaccggct gcttccgcag cacgaagtcc atgatcgaga
     1501 gatcgtgcac cgcgaggtcc cacagcacgt tgacgtcgtg ctggaagagc cccaggttga
     1561 tgcggaccga gtcgtagtaa tagatgtcgc ccagctcgcc cgattcggtg agctcgcgca
     1621 tcttgcggac ggcgccggtg tagacgaagg tgtgatccac catcagcacc agctggcgcg
     1681 ccgccgcttc ctcgatcagg cggctcgcct gctcgctcgt ggaggtcatc ggcttctcga
     1741 ccagcacgtg cttgccggcg cgcagcgacg ccagcgccag atcgaagtga tattgaaccg
     1801 gcgtggcgat caccacggcg tccaccgccg ggtcgttcca cacgtcggcc ggcgtggtgg
     1861 tggtgcgcac acccgggtag cgccgttcca cctgttcgag ctgcgccggc cgcaggtcgc
     1921 acaccatccg caccgccgca ccctggcact cggcgaagtt gcgaacgagg ttcggccccc
     1981 agtagccgta gccgatgacg ccgatgccga tcatgcctct accctgccgt cccggcggct
     2041 tcggaccagg gttcgcgccg gcacgcccgc gacggtggcg ccggccggca catcgtgtgt
     2101 caccacggca ccggccccga cgagcgcccg ctcgccgatc gtg
//
LOCUS       DASSYW010000602         4001 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1726274, whole genome shotgun sequence.
ACCESSION   DASSYW010000602 DASSYW010000000
VERSION     DASSYW010000602.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4001)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4001)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4001
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1726274"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1691)
                     /locus_tag="VFN38_09620"
     CDS             complement(<1..1691)
                     /locus_tag="VFN38_09620"
                     /inference="COORDINATES: protein motif:HMM:NF012936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004066 - asparagine synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006529 - asparagine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase-related protein"
                     /protein_id="HET9012059.1"
                     /translation="MSCVVALADLTGAPAERAALARAASVPPFDGSRAAITLDSQVGL
                     ASAPLPRCEPGWATTSPPGYGASITLVLDGRFDDRAGLRRRLAPRLAVDPAAVSDADL
                     ALAAYLQWGLDAPAHLTGEFAWCLWDGRERRLVAARDHFGVRPLYYAGSSATLVVSNA
                     VACLQRAGVVSTRLLDRAVGDLLVFDDPQEPADTMLADVRRVPAAHVLTWTPHAGLAL
                     WAYWRLQAPAAGRSHPSAAEAFGAALQQAVDDRVGHEPATVMMSGGLDSTSVAAMAVR
                     RSAPGAVRALTSVHRALPQDEEERFAAVAAQAIGLPWDTHPLDGYRLFDRWDTDARPV
                     LPMAEPLTAVMADLLERMSAHGGVALSGDGGDPLLLPATLPRHIGRMPAGEIARGVWR
                     LWSGYRKPPLLGLRSSWRRLRTSETPPPAWLAAPLRAVYDVDARKREVKAAARVEMDV
                     LRRESVRQLRSPWWPSLFESLHPAATRRPVEIRYPFFDRRVVGAALALPSYPWCVGKI
                     ALREATAGLLPDAIRLRPKTPFAGNPVGLRQKPAFEDAIALLRSAPGIERFVDVSR"
     gene            1755..2744
                     /locus_tag="VFN38_09625"
     CDS             1755..2744
                     /locus_tag="VFN38_09625"
                     /inference="COORDINATES: protein motif:HMM:NF018076.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HET9012060.1"
                     /translation="MTGLLEFHAFLLSNTGSRLDRFAKALASAIRPGDTVLDLGAGSA
                     ILSILACEAGARRAYAVEDTDAVSIARALISATPYRDRIEIVHGTSFDLTLAERADVL
                     VADVHSTFGLQEKGLRAMLDARDRLLKPGGRMVPASMQLRVAPADAAEVYDAKVATWQ
                     RTVHGVSLALVRDLAVNSLHPARLRTDQLLAEPETVCTVDFTTAASLHLAGQVRMRAT
                     RPGTLHGLCGGIFTTLADRVEISNLPGDPGTSNFAHAFLPIDTPVEVTSGDPIDVQID
                     SFDGDELRWIVTVTPSAGHPRRFTQSTFLSRTLTHETLRKHDPSYRPALTTRG"
     gene            complement(2833..3330)
                     /locus_tag="VFN38_09630"
     CDS             complement(2833..3330)
                     /locus_tag="VFN38_09630"
                     /inference="COORDINATES: protein motif:HMM:NF033537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lasso peptide biosynthesis B2 protein"
                     /protein_id="HET9012061.1"
                     /translation="MTLAVLATRARRLSAAEWLVLGESAVLAVIIEVALHLVPIARIL
                     QAIEGRALPHASRLDRTAQDRVARLARWPSRVLPLPATCLRVALVQVAVLRRRQVPAT
                     VRFGVRRPAGGGELEFHAWADSDGPFDDPAGVDGYRAFEPVTASAISRSARWSSPAAP
                     PGVTA"
     gene            complement(3327..3641)
                     /locus_tag="VFN38_09635"
     CDS             complement(3327..3641)
                     /locus_tag="VFN38_09635"
                     /inference="COORDINATES: protein motif:HMM:NF017239.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PqqD family protein"
                     /protein_id="HET9012062.1"
                     /translation="MSNQPDPTQAFAASPSVVFRRMDDGAVLLDLESGVYFGLDEVGT
                     RVWTLLVDRGTPAAVCSAMLGEFDVDADVLTADVLRLVGELQQSGLVRAAPVRRRFSE
                     GA"
BASE COUNT          604 a         1487 c         1409 g          501 t
ORIGIN      
        1 cgggacacgt ccacgaagcg ctcgatcccc ggcgcggatc gcagcagcgc gatcgcgtcc
       61 tcgaacgccg gtttctgccg caagcccacc gggttcccgg caaacggcgt cttcggccgc
      121 agccgaatcg cgtcgggcag caggccggcc gtggcctcgc gcagggcgat tttgccgacg
      181 caccacggat acgacggcag cgccagcgcc gcgcccacca cgcggcgatc gaagaacgga
      241 tagcggatct ccacgggccg ccgcgtggcg gcgggatgca ggctctcgaa gagcgatggc
      301 caccagggcg atcgcagctg ccgcaccgac tcgcggcgca ggacgtccat ctccacgcgc
      361 gcggccgcct tcacctcacg cttccgcgcg tccacgtcgt acacggcccg caggggcgcc
      421 gccagccagg ccggcggcgg cgtctcggat gtgcgcaggc ggcgccagct ggaacgcagg
      481 ccaaggagcg gcggcttcct gtaaccgctc cagagccgcc agactccgcg cgcgatctct
      541 cccgccggca tgcggccgat atgtcgcggg agcgtggccg gcagcagcag cggatcgccg
      601 ccgtcgcccg acagcgccac gccgccgtgc gccgacatcc gctccagcag gtcggccatc
      661 accgcggtga gcggttcggc catcggcagc accgggcggg catcggtgtc ccagcggtcg
      721 aacagccggt agccgtccag cggatgcgtg tcccacggaa gtccgatcgc ctgcgccgca
      781 acggcggcga aacgctcttc ctcgtcctgc ggcagggcgc ggtggaccga ggtgagcgcc
      841 cggaccgcgc ccggcgcgct tcgccgcacc gccatcgcgg cgacgctcgt cgaatcgagc
      901 ccgccgctca tcatcaccgt ggccggttcg tgccccacgc ggtcatcgac cgcctgttgc
      961 agcgccgcgc cgaacgcttc ggccgcgctg gggtgcgacc gtcctgccgc gggcgcctgg
     1021 agccgccagt acgcccacag tgcgagacct gcgtgcggcg tccatgtgag gacgtgcgcg
     1081 gccgggacac ggcgtacgtc cgccagcatc gtgtccgcgg gctcctgcgg atcgtcgaag
     1141 acgagcagat cgcccacggc ccgatcgagc aggcgggtcg acacgacccc ggcgcgctgc
     1201 aggcaggcca ccgcgttcga gaccacgagc gtggcggaac tgccggcgta atagagcggg
     1261 cggacgccga aatggtcgcg cgcggcgacg aggcgccgtt cgcgcccgtc ccagagacac
     1321 cacgcgaact cgcccgtgag atgcgcgggc gcgtcgaggc cccactgcag ataggccgcc
     1381 agcgccagat cggcgtccga caccgccgcc ggatcgaccg cgaggcgcgg cgccagacgg
     1441 cgccgcaggc cggcgcggtc gtcgaagcgc ccgtcgagga cgagggtgat ggatgcgccg
     1501 tagccgggcg gcgacgtggt cgcccagccc ggttcacacc ggggcagcgg agccgacgcc
     1561 aggcccacct gcgagtcgag ggtgatagcg gcgcgggagc cgtcgaacgg cggcaccgag
     1621 gcggcgcgcg ccagcgccgc gcgctcggcg ggcgcgccgg tcagatcggc gagggcaacg
     1681 acgcacgaca ctcggtggat ccgcggcgag agtaccacgc cgccgcattc gtggcaggat
     1741 cggcctcgcc ccccatgacc ggcctgctcg agttccacgc attcctgctg tcgaacaccg
     1801 gctcgcgcct cgatcgattc gccaaagcgc tggcttcggc gattcggccc ggcgacaccg
     1861 tgctcgatct cggagccggc tccgccatcc tgtcgatcct cgcgtgcgag gccggcgccc
     1921 ggcgggccta tgcggtggaa gacaccgacg cggtgtcgat cgcgcgcgcg ctcatcagcg
     1981 cgacgcccta ccgagaccgg atcgagatcg tgcacggcac gtcgttcgat ctcacgctgg
     2041 ccgagcgcgc cgacgtgctc gtggccgacg tgcactccac gttcggactg caggagaaag
     2101 ggctgcgcgc catgctcgac gcgcgcgacc ggctgttgaa accgggcggc cgcatggtac
     2161 cggcgtcgat gcagctccgg gtcgcgccgg ccgacgccgc ggaggtctac gacgccaaag
     2221 tggccacgtg gcagcgcacg gtgcacggcg tctcgctcgc gctggtgcgc gacctcgccg
     2281 tcaacagcct ccatcccgcg cggctgcgga cggaccaact gctggcggag ccggagaccg
     2341 tctgcacggt ggacttcacc acggccgcca gcctccatct cgcgggtcag gtgcggatgc
     2401 gggcgacgcg tccgggcacg ctgcacgggc tgtgcggtgg catcttcacc acgctggccg
     2461 accgggtcga gatcagcaac ctgccgggcg acccgggcac gagcaacttc gcgcacgcgt
     2521 tcctgccgat cgacacgccc gtggaggtga cgtccggcga cccgatcgac gtccagatcg
     2581 attccttcga cggcgacgag ctgcgatgga tcgtcaccgt cacgccgtcg gccggccacc
     2641 cacggcgctt cacgcagtcc acgttcctgt cgcgcacgct cacgcacgag acgctgcgca
     2701 agcacgaccc gtcgtaccgg ccggcgctga ccacccgcgg ctagctcgaa cgcgatctgc
     2761 tggcacagat cgacggcacg cgctcgctcg acgaactgcg ggaatggttt ctcgcgcgcg
     2821 gcggcgcgca gctcacgccg tcacgcctgg cggagctgct ggcgacgacc atcgagcgct
     2881 gcggctgatc gcactcgcgg tcaccggctc gaacgcacgg tagccgtcca cgccggccgg
     2941 gtcgtcgaag gggccgtcgc tgtcggccca ggcgtgaaac tccagctcgc cgccgccggc
     3001 tggccggcgc acgccgaatc gcacggtggc gggaacctgg cggcgccgca gcacggctac
     3061 ttgtaccagg gcaacccgaa gacacgtggc cggcagcggc agcacgcgcg atggccagcg
     3121 cgccaggcgg gcgacgcggt cctgcgcggt ccggtcgagg cgagacgcgt gcggcagcgc
     3181 gcggccctca atcgcctgca ggatgcgggc gatgggaacg aggtgcagcg ccacttcgat
     3241 gatcaccgcg agcaccgcac tctcgccgag caccagccac tccgccgcgg agagccggcg
     3301 cgcgcgtgtc gcgagcacgg ccagcgtcat gcgccctcgc tgaagcgacg gcgcacaggc
     3361 gcggcgcgta ccagcccgct ctgctgcagc tcgcccacca ggcgcaggac gtcggcggtc
     3421 aggacatccg cgtctacgtc gaactcaccg agcatcgcgg agcacaccgc ggccggcgtg
     3481 ccgcgatcga cgagcagcgt ccacacgcgc gtgccgactt cgtcgaggcc gaaatacacg
     3541 cccgactcga ggtcgagcag cacggcgccg tcgtccatcc ggcggaacac gaccgacggg
     3601 ctggcggcaa aggcttgcgt gggatccggc tggttggaca tctgtttttg caccactccg
     3661 agcggcgaag cctcgtgcac gcgcgtgcag gacccgccac gcggcgtcct gtccgctgtc
     3721 acagtgtgcg ccgatagttt acagagatat gcaggggatt ccccaggggc gctccgaccg
     3781 gttgtcccgg gtcaccgggc cggcggctac ccgctccggg ccggtcgaaa cccacgtgct
     3841 cgactacctg gcctcgatct accggcaccg ctacctcgcc gccatcgtgt tcgcggtggt
     3901 ggtcgtggcg gccggcatcc gcgcgtccat gaccacgcca ctctaccggg cgcaggcgcg
     3961 ggtgatgatc gagatcgaag acgaccagac cacggcgctc t
//
LOCUS       DASSYW010000603         2030 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1124388, whole genome shotgun sequence.
ACCESSION   DASSYW010000603 DASSYW010000000
VERSION     DASSYW010000603.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2030)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2030)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2030
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1124388"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..960
                     /locus_tag="VFN38_09640"
     CDS             <1..960
                     /locus_tag="VFN38_09640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012063.1"
                     /translation="KRSKTEQQDVDLSVSMVDRVIQGALPAPADYTLAWESNHFTKGQ
                     DGSTYVPFTMVVDKALAGKQVAYYVRVVPKGTPPPPMPDPKAKDNKNAPARPEYPWER
                     ITFVTVPDSGKMSRALLLKPGDYDTYITLKEKSTAEIKDITKATPPKMAYLKRELTVP
                     DYGSAELKMSTPILASTLEPLTAPLTPAQIEENPYGVFGAMKIVPSPDGKFSKAGEFS
                     VVFFVYGAGDAGGGKPNMALDYSFYTKQGEGEKYFNKTAPQEMNGTTLAPDFNVAAGH
                     QVPGMLSIPLASFPVGDYRLEIKVTDKVSNKTITQSVNFTVAA"
     gene            1031..>2030
                     /locus_tag="VFN38_09645"
     CDS             1031..>2030
                     /locus_tag="VFN38_09645"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HET9012064.1"
                     /translation="MRHTRLLGSAAAVGLCLTIPALPASAQVVRPQLISRTAAVPAAE
                     LSGLVNDRNGRPLAGAVVSAVGSESAFAVSDAEGRFTLRTLPPGPYLVRAHLQGYLPA
                     RPRLMQIGTSARGGFTITMVKRSESTDTPAVVAAGVGPVETPVVEPETEGTHEHDELA
                     WRLRHLRRSVLKNDGERVPGLDTTLPADGPWYGLGRAVGESARLATSLLADLPLDGQF
                     NLITTTSFDRPQDLFSPDAALPRSVAFVSLSSPMSNGEWRMRGAVTQGDLSSWTVAGS
                     YARSLHATHAYQAGFSYGMQRYAGGNAEALSAITDGSRTVGVLYGYDSWTLTQALRL"
BASE COUNT          351 a          678 c          694 g          307 t
ORIGIN      
        1 aagcgctcca agaccgagca gcaggacgtc gatctgtcgg tgtccatggt cgatcgcgtg
       61 attcagggtg cgttgcccgc gcccgccgat tacacattgg cctgggagtc gaaccacttc
      121 accaaggggc aggatggctc cacctacgtg ccgttcacga tggttgtgga caaggcgctc
      181 gcgggcaagc aggtggccta ctacgtgcgc gtcgtcccga agggcacgcc gccgccgccg
      241 atgcccgatc cgaaggccaa ggacaacaag aacgcccccg cacggccgga gtacccgtgg
      301 gagcgcatca cgttcgtcac ggttccagac agcggcaaga tgtcgcgtgc gctcttgctg
      361 aagccgggcg actacgacac gtacatcacg ctgaaagaga aatcgacggc cgaaatcaag
      421 gacatcacca aggccacgcc gccgaagatg gcgtatctga agcgcgagct cacggttccc
      481 gactacggca gcgccgagct gaagatgagc acccccatcc tggcatcgac gctcgagccg
      541 ctgacggcgc cgctgacgcc ggcgcagatc gaagagaacc cgtacggcgt cttcggtgcc
      601 atgaagatcg tgccgtcgcc agacgggaag ttctcgaagg cgggcgagtt cagcgtggtc
      661 ttcttcgtct atggcgcggg tgacgctggc ggcggcaagc cgaacatggc gctggactac
      721 tcgttctaca cgaagcaggg cgagggcgag aagtacttca acaagacggc tccgcaggag
      781 atgaacggaa cgacgctggc gcccgacttc aacgtggccg cgggccacca ggtgccgggg
      841 atgctgtcca tcccgctggc cagcttcccg gtgggcgact accggctgga aatcaaggtc
      901 accgacaagg tgtccaacaa gacgatcacg cagagcgtca acttcacggt cgctgcgtga
      961 ccgatgtgta cgtagaggcg gacctttagg tccgcctgga gtccgtgcgg ggaccgcgag
     1021 ggcacgggag atgagacaca cacgcttgct gggtagcgcc gctgcagtcg ggctgtgcct
     1081 gacgatcccc gcgctgcccg cctcggccca ggttgttcgc ccgcagctca taagccgcac
     1141 ggcggcggtg ccggcagccg agctctccgg cctcgtcaac gatcgaaacg ggcgtccgct
     1201 tgccggcgcc gtggtatcgg ccgtcggatc cgagtcggcg ttcgccgtgt ccgacgccga
     1261 gggccgcttc acccttcgca cgctgccgcc ggggccctac ctggtgcgcg cccatctcca
     1321 gggctatctg ccggcccggc cgcgcctcat gcagatcggc acgagcgcgc gcggcggctt
     1381 caccatcacg atggtgaagc gctcggaatc gacggatacg cctgcggtgg tcgccgccgg
     1441 cgtcggcccg gtcgagacgc cggttgtcga acccgaaacc gaaggtacgc acgaacacga
     1501 cgagctcgcg tggcggctgc ggcatctgag gcgcagcgtg ctgaagaacg acggcgagcg
     1561 ggtgccgggg ctcgacacca cgctccccgc ggacggcccg tggtacggtc tgggccgcgc
     1621 ggtgggcgaa agcgcgcgcc tcgcgacgtc gctcctcgcc gacctgccgc tcgacggtca
     1681 gttcaacctg atcacgacga cctcgttcga tcgtccgcag gacctgttct cgcccgacgc
     1741 ggcgctgccg cgcagcgtgg cgttcgtgtc gctgtcgtcg ccgatgtcga acggcgaatg
     1801 gcgcatgcgg ggcgccgtca cgcaaggcga cctctcgtcg tggacggttg ccgggtcgta
     1861 cgcacgcagc ctgcacgcga cgcacgcgta tcaggccggc ttctcgtacg gcatgcagcg
     1921 ctacgcgggc ggcaacgccg aggcgctgtc ggcgatcaca gacggcagcc gcacggtggg
     1981 cgtgctgtac ggctacgact cgtggacgct gacgcaggcc ctgcgtctgg
//
LOCUS       DASSYW010000604         4083 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1235833, whole genome shotgun sequence.
ACCESSION   DASSYW010000604 DASSYW010000000
VERSION     DASSYW010000604.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4083)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4083)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4083
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1235833"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(7..1071)
                     /locus_tag="VFN38_09650"
     CDS             complement(7..1071)
                     /locus_tag="VFN38_09650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012065.1"
                     /translation="MPPRRRRRIDPALFELPVERIRAGEFSDVYFNRARAALHADERQ
                     ARVTWQVSAKRAGWLGGIDEAVALLRLCSDDFSALDVHALYEGDRVEPWDTVLLVEGD
                     YAGFAHLETLVLGSLARRTRICTNVRTLVDAARPKPVYYFGARSDHARLQPGDGLSAH
                     VGGAASVSTDAQGAFTGKKGVGTVPHALIAAYGGDTVAAALAVARVLPPEVPLIALVD
                     YENDSVATSIAVARALEGRLWGVRLDTSEFMVDRSVLGHMGTFPPTGVNPVLVWNVRN
                     ALDTEGFGEVKIVASGGFDVSRVRAFEEEGVPVDAYGVGASVQDGRWDFTADVVRLDG
                     APQAKAGRELRPNAKLEKVK"
     gene            complement(1074..2984)
                     /locus_tag="VFN38_09655"
     CDS             complement(1074..2984)
                     /locus_tag="VFN38_09655"
                     /EC_number="4.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate ammonia-lyase"
                     /protein_id="HET9012066.1"
                     /translation="MPNTVRDHLRALAFLEGLTDTAVHQLSHLVQPVEYRCDTMLFEE
                     GEHRQLLALLVSGAVAIEKRQNGRPIRLATLGPGEAVGEGLLLDDSTHGTSARAILNT
                     TAYVLSREQVDDMLKESPTLYAALVGRAARAISQRLSAVDATLVGRGRTLGFGGARTR
                     TEHDPLGDREVPADALYGVQTLRAMENFAITGVPLREFPALIEALASVKEAAAQANGE
                     LGLLTPAVADLIVRAAEEIRAGRHHEHFLVDMIQGGAGTSTNMNANEVIANRALELSG
                     REKGEYQHVHPNNHVNLSQSTNDVYPTAVKLALHSAIEGLRLAEKDLAAAFLAKGDEF
                     APFIKMGRTQLQDAVPMTLGQEFTAFGHTILEDVERLGEAQALIREINMGATAIGTGI
                     NAPQGYAEAVRAHLSRITSLALITAPDLVEATADTGAFVQLSGVLKRCAVKLSKICND
                     LRLLSSGPRAGFGEINLPAMQPGSSIMPGKVNPVIPEVVNQVCFDVIGGDMTVTMAAE
                     AGQLQLNVFEPVIAYRLLGGMASLTNACTVLRERCVVGITANPDRMRQFVEHSIGIVT
                     ALVPVLGYEASTEIARDALASGRGVFELVLERGLMTREQLDHALDPEAMTAPPAAPAA
                     KPATKGSRPAKR"
     gene            3090..>4083
                     /locus_tag="VFN38_09660"
     CDS             3090..>4083
                     /locus_tag="VFN38_09660"
                     /inference="COORDINATES: protein motif:HMM:NF013292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase"
                     /protein_id="HET9012067.1"
                     /translation="MSLSRREFLGASAVTAASLALPGRASAGVPAAPAAGRPAVIASG
                     NGLRGVREAYDRMTRANADPLDAAIAGVNIQELDPDDMSVGLGGLPNEEGVVQLDASC
                     MHGPTKRAGAVGCLEDIATPSLVAKAVMDYTDHIMLVGHDAKRFALRMGFKEQNLLTD
                     KSREEWLKWKTRLNPSDSWLEPSETSVRSPQSPPAPPAPRRNPPSGGKDLTYDEYGVA
                     HTWGTINMNAVDAKGDLSSVTTTSGISWKVPGRVGDSPIIGAGQYCDNTVGAAGSTGR
                     GESNIKVCGAFLTVELMRQGKTPEQAIITVMERVLAMTEKRLLDERGRPFFDLQF"
BASE COUNT          592 a         1461 c         1439 g          591 t
ORIGIN      
        1 tcccggctac ttcaccttct ccagcttcgc gttcggccgc agctcccgtc ccgccttggc
       61 ctgcggcgcg ccgtcgagcc gcacgacgtc ggccgtgaag tcccagcgcc cgtcctgcac
      121 gctcgcgccc acgccatacg cgtccaccgg caccccctcc tcctcgaacg cgcgcacgcg
      181 cgacacgtcg aacccgccgg acgcgacgat cttcacctcg ccgaaccctt ccgtgtccag
      241 cgcgttgcgg acgttccaca cgagcaccgg gttcaccccg gtcggcggaa aggtgcccat
      301 gtgccccagg accgagcggt ccaccatgaa ctccgaggtg tcgagccgca ccccccacag
      361 gcgcccctcg agcgctctcg ccacggcgat gctggtggcg acggagtcgt tctcgtagtc
      421 gacgagcgcg atcagcggca cctccggcgg cagcacgcgc gcgacggcga gcgcggcggc
      481 gacggtgtcg ccgccgtacg cggcgatgag cgcgtggggc acggtgccca cgcccttctt
      541 gccggtgaac gcgccctgcg catccgtgga gacgctcgcc gcgcccccca cgtgcgcgct
      601 cagcccgtca cccggctgca ggcgcgcgtg atcgctccgc gcgccgaagt agtacacggg
      661 cttggggcgg gcggcgtcca ccagcgtgcg cacattggtg cagatccgcg tgcgtcgcgc
      721 cagcgagccg agcaccagcg tctcgaggtg cgcgaagccg gcgtagtccc cctccacgag
      781 cagcaccgta tcccacggct ccacgcggtc gccctcgtag agcgcgtgca cgtcgagcgc
      841 cgagaagtcg tcgctgcaca gccggagcag cgccacggcc tcgtcgatgc caccgagcca
      901 gccggcacgc ttggcggaca cctgccaggt cacccgtgcc tgccgctcgt ccgcgtgcag
      961 ggccgcccgc gcccggttga aatagacgtc gctgaactcc cccgcgcgga tccgctcgac
     1021 cggcagctcg aagagcgccg gatcgatccg ccgtcgtcgt cgcggcggca cggctagcgc
     1081 ttcgcggggc gactgccctt cgtcgccggc ttcgcggcgg gcgcggccgg cggcgccgtc
     1141 atggcttcgg gatcgagcgc atggtcgagc tgctcgcgcg tcatgaggcc gcgctccagc
     1201 acgagctcga acacgccccg cccgctcgcc agcgcgtcgc gcgcgatctc cgtggacgcc
     1261 tcgtagccga gcacgggcac gagcgccgtc acgatcccga tggaatgctc cacgaactgc
     1321 cgcatccggt cggggttcgc cgtgatgccg acgacgcagc gctcccgcag cacggtgcac
     1381 gcgttcgtga gcgaggccat cccccccagc agccgatacg cgatcacggg ttcgaacacg
     1441 ttgagctgga gctgccccgc ctcggcggcc atcgtgacgg tcatgtcgcc gccgatcacg
     1501 tcgaagcaga cctggttcac cacttcgggg atcaccgggt tgaccttgcc cggcatgatc
     1561 gacgagccgg gctgcatcgc cggcaggttg atctcgccga atccggcgcg cggcccggag
     1621 ctcagcagcc ggaggtcgtt gcagatcttg gagagcttca ccgcgcagcg cttgagcaca
     1681 cccgagagct ggacgaacgc gccggtgtcg gccgtcgcct ccacgaggtc gggggcggtg
     1741 atgagcgcga gcgacgtgat gcgcgacagg tgcgcgcgca ccgcctcggc gtacccctgc
     1801 ggcgcgttga tccccgtgcc gatcgccgtg gcgcccatgt tgatctcccg gatgagcgcc
     1861 tgggcctcgc ccagccgctc cacgtcctcc aggatggtgt ggccgaaggc ggtgaactcc
     1921 tggcccagcg tcatcggcac ggcgtcctgg agctgggtgc gccccatctt gatgaacggc
     1981 gcgaactcgt cgcccttggc gagaaaggcg gcggcgaggt ccttctccgc gagccgcagc
     2041 ccctcgatgg cagagtggag cgccagcttc accgccgtgg gatagacgtc gttcgtggac
     2101 tggctgaggt tcacgtggtt gttggggtgc acgtgctggt actcgccctt ctcgcgcccg
     2161 gagagctcca gcgcccggtt ggcgatcacc tcgttcgcgt tcatgttcgt ggaggtgccc
     2221 gcgcccccct ggatcatgtc caccaggaaa tgctcgtggt ggcggccggc gcggatctcc
     2281 tcggcggcgc ggacgatgag gtcggcgacc gcgggggtga ggaggccgag ctcgccgttc
     2341 gcctgcgcgg cggcttcctt taccgaggcg agcgcctcga tgagggcggg gaactcgcgc
     2401 agcggcacgc cggtgatggc gaagttctcc atcgcgcgca gcgtctgcac gccgtagagc
     2461 gcgtcggcgg ggacctcgcg gtcgccgagc gggtcgtgct cggtgcgggt gcgcgccccg
     2521 ccgaacccca gggtccggcc acggccgacg agggtggcgt ccaccgcgga caggcgctgg
     2581 gagatggccc gggcggcccg gcccaccagc gcggcgtaga gggtgggcga ctccttcagc
     2641 atgtcgtcca cctgctcccg gctcaggacg taggccgtgg tgttcaggat ggcccgggcg
     2701 ctggtgccgt gggtggaatc gtcgaggagg agcccctcgc ccaccgcctc gccgggaccg
     2761 agggtggcga ggcggatggg acggccgttc tggcgcttct cgatcgccac cgcgccggag
     2821 accaggagcg cgagaagctg ccggtgctcg ccctcctcga agagcatcgt gtcgcagcgg
     2881 tactcgaccg gctggacgag gtgggagagc tggtgaacgg cggtatcggt gagcccctcg
     2941 aggaaggcga gggcgcggag atggtcgcga acggtgttgg gcataggtca ccaaattacc
     3001 acggcggacg gcgttcgggg ccgacggctc tggcgtcccg gccgcccggg ccctagttaa
     3061 ccccgtctcc tcccaccccg agccgcccca tgtccctgtc ccgtcgcgag ttcctcggcg
     3121 cctccgccgt caccgccgcc agcctggcgc tcccggggcg ggcgtccgcc ggtgtcccgg
     3181 ccgcgccggc ggccggccgt cccgccgtga tcgcgagcgg gaacgggctc cggggggtcc
     3241 gcgaggcata cgaccgcatg acccgggcga acgccgatcc cctggacgcg gccatcgccg
     3301 gggtgaacat ccaggagctc gatcccgacg acatgtccgt cgggctgggc gggctgccta
     3361 acgaggaagg cgtcgtgcag ctggacgcga gctgcatgca cgggccgacg aagcgcgccg
     3421 gcgccgtcgg ctgcctcgag gacatcgcca ccccctcgct cgtcgcgaag gccgtcatgg
     3481 actacaccga ccacatcatg ctggtcgggc acgacgcgaa acgcttcgcc ctcaggatgg
     3541 gcttcaagga gcagaacctg ctcacggaca agtcgcgcga ggaatggctg aagtggaaga
     3601 cacggctgaa tccgagcgac tcgtggctcg agccatcgga gacgtcggtg cgctcacccc
     3661 aatcgccgcc ggcaccaccg gcgccacgac gcaatccgcc gagcggtggc aaggatctca
     3721 cgtacgatga gtacggcgtg gcccacacgt ggggcacgat caacatgaac gccgtcgacg
     3781 cgaagggcga tctcagctcg gtgacgacca cgagcggcat cagctggaag gttccgggtc
     3841 gggttggcga ctcgccgatc atcggggcgg ggcagtactg cgacaacacg gtcggcgctg
     3901 ccgggtcgac ggggcggggt gaatcgaaca tcaaggtgtg cggcgcgttc ctgacggtgg
     3961 agctcatgcg ccaggggaag acgcccgaac aggccatcat caccgtcatg gagcgcgtgc
     4021 tcgcgatgac ggagaagcgg ctactcgatg agcgcggccg tccgttcttc gaccttcagt
     4081 tct
//
LOCUS       DASSYW010000605         2848 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1073952, whole genome shotgun sequence.
ACCESSION   DASSYW010000605 DASSYW010000000
VERSION     DASSYW010000605.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2848)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2848)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2848
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1073952"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..621
                     /locus_tag="VFN38_09665"
     CDS             <1..621
                     /locus_tag="VFN38_09665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012068.1"
                     /translation="GVYGGKWKAEASAFNGREPDEDRTDFDFAALDSVSGRLTYLPLP
                     SVSLQVSAGRLAEAEEGEPGEARTTVTRTTASATVHTGVRDGSIWATTVAWGRNAEEH
                     HATNAYLVETNYTQRARHAWFGRFEVTQKTAHDLALDVVGEDAFTVSKLQGGYTRYFA
                     PRRGFAPGVGGALSFGFVPESLEAAYGSRVNPGIAVFLTVRPAGRM"
     gene            625..1257
                     /locus_tag="VFN38_09670"
     CDS             625..1257
                     /locus_tag="VFN38_09670"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HET9012069.1"
                     /translation="MRARTAALVASVGTLAVVAAAGLIYVKASGLRTTPPPSPIEETI
                     ARSVRRFAVPAADARRTNPVPLSDAALAEGLAHYADHCASCHAIDGSGSTALGQGLFP
                     KAPDMRGAATRAMTDGELFYVIEHGIRFTGMPGWTTGTADGETGSWQLVHVIRHLPAL
                     TEAERARMESLLPRSAEELRQEIDEEEFLNGGPPSPRLRRTSEPSVTHSH"
     gene            1270..1584
                     /locus_tag="VFN38_09675"
     CDS             1270..1584
                     /locus_tag="VFN38_09675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012070.1"
                     /translation="MKNWIIVTLVALVLSVPGVALAHGGHVHKVLGTVTDIDYPHMDV
                     LTTDKKTVTIMLDGSSKITRGKVKLAETDIKVGDRVSVETEEKGGMMMVKTMKVGAVP
                     AK"
     gene            1592..2167
                     /locus_tag="VFN38_09680"
     CDS             1592..2167
                     /locus_tag="VFN38_09680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012071.1"
                     /translation="MIRRALAAAVVLALAAPAAGQAPIKATVPASKPAWTKGIQPLTR
                     DSYYHAIECGKLGAAEPSCVFYDAGLCKNDDFVLALYSPYKQVAYEVWGAVSRKRPVP
                     TPSYQAAQQTRVVIGITPVRGTKNQIANVLVKRGGKTIEPDTRTIDGTSGNFIFGFPP
                     FAPTAAITLEMVGKARTISCVLDRAALSRLR"
     gene            complement(2189..>2848)
                     /locus_tag="VFN38_09685"
     CDS             complement(2189..>2848)
                     /locus_tag="VFN38_09685"
                     /inference="COORDINATES: protein motif:HMM:TIGR03435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03435 family protein"
                     /protein_id="HET9012072.1"
                     /translation="NIIRNAWNITNDQIVDGPAWIDSDRFDITAKASVPFNQNEARGM
                     LQTLLAERFGLVTHMEKRPLPVYLLVLARKDGALGPQMKKADIDCAALFAAVTAGGKM
                     PDRLPNGNLPCGLSVRANQGLVTGNAVAMEALARNLTGGVGRIVVDKTELKGYYDLNL
                     TFAPEGPPPPPGAPPAQAADPSAPSLFTAMQEQLGLKLEPGREPIDVLVIDRVQLPTA
                     D"
BASE COUNT          466 a          929 c         1014 g          439 t
ORIGIN      
        1 ggcgtctacg gcgggaaatg gaaggcggaa gcgtcggcgt tcaacggccg cgagccggac
       61 gaagaccgca cggacttcga cttcgccgcg ctcgactcgg tgtccgggcg gctgacgtac
      121 ttgccgctgc cgtccgtgtc attgcaggtg tcggctgggc ggctggcgga ggccgaagag
      181 ggtgagccgg gagaagcgag aaccaccgtc acgcgcacca cggcgtcggc caccgtgcac
      241 acgggcgtcc gcgacggtag tatctgggcg acgactgtcg cctggggccg caatgcggaa
      301 gaacaccatg cgaccaacgc atatctggtg gagaccaact acacgcagcg ggcacgccac
      361 gcctggttcg ggcgcttcga ggtgacgcag aagaccgcgc acgatctcgc gctcgacgtg
      421 gtgggcgaag atgccttcac ggtgtcgaag ctccaggggg gctacacgcg ctacttcgcg
      481 ccgcggcgcg gcttcgcgcc gggcgtcggc ggcgcgctgt cgttcggttt cgtgccggag
      541 tcgctcgaag ccgcctatgg cagtcgcgtc aaccctggca tcgccgtctt cctcacggtg
      601 aggccagcgg gccggatgta gatgatgaga gcccgcaccg ccgcgctggt tgcgagtgtc
      661 ggcacgctgg ccgtcgtggc ggcggcggga ttgatctacg tgaaggcgag cggcctgcgc
      721 acgacgccgc cgccgtcgcc gatcgaagag acaatcgcgc ggagcgtccg gcggttcgcg
      781 gtgccggccg ccgacgcacg gcggaccaac ccggtgcccc tgtcggacgc cgcgctggcc
      841 gaggggctcg cgcattacgc ggatcactgc gcctcgtgtc acgctatcga cggcagcggc
      901 agcaccgccc tgggccaggg gctgtttccg aaggcgccgg acatgcgcgg cgccgccacg
      961 cgggcgatga ccgacggcga gctgttctac gtgatcgagc acggcatccg gttcaccggg
     1021 atgccaggtt ggacgaccgg aaccgccgac ggggagaccg ggtcgtggca gctcgtgcac
     1081 gtgatccggc acctgccggc gttgacggag gccgagcgtg cgaggatgga gtcgctgctg
     1141 ccgcggtcgg ccgaggagct gcgtcaggag atcgacgaag aggagttctt gaacggcggt
     1201 ccgccttcgc caaggctacg gcggacaagc gagccatcag tcacgcattc gcactaggag
     1261 cattcgcgta tgaagaactg gatcatcgtc acgctggtcg cgctcgtcct gtcggtaccc
     1321 ggtgtcgcgc tcgcgcacgg aggccacgtt cacaaggtgc tcggtaccgt cacggacatc
     1381 gactacccgc acatggacgt gctgacgacc gacaagaaga ccgtgaccat catgctggac
     1441 ggcagctcca agatcacgcg aggcaaggtc aagctggccg agaccgacat caaagtgggc
     1501 gatcgcgtgt cggtggagac cgaagagaag ggcggcatga tgatggtgaa gacgatgaag
     1561 gtcggcgccg tccccgcgaa gtagcccgcc gatgattcga agagcgctcg cggcggccgt
     1621 cgtgctggcg ctggcggctc cggccgccgg ccaggcgccc atcaaggcga cggtgccggc
     1681 cagcaagccg gcgtggacca agggcattca gccgctcacg cgcgacagct actaccacgc
     1741 gatcgagtgc ggcaagctgg gcgccgcgga gccctcgtgc gtcttctatg acgcgggtct
     1801 ctgcaagaac gacgacttcg tgctcgccct ctactcgccg tacaagcaag tggcatacga
     1861 ggtgtggggc gccgtgagcc ggaagcgtcc cgtgccgacg cccagctatc aggccgccca
     1921 gcagacgcgc gtggtgatcg ggatcacgcc ggtgcgcggc acgaagaatc agatcgccaa
     1981 cgtgctcgtc aaacgcggcg gcaagaccat cgagcccgat acgcgcacga tcgacggtac
     2041 gtccggcaac ttcatcttcg gcttcccgcc ctttgcgccc acggcggcca tcacgctcga
     2101 gatggtgggg aaggcgcgga ccatctcctg cgtcctcgac cgcgccgcgc tgtcacgcct
     2161 gcggtaggca ggcctgaagg cctgccctct agtccgccgt tgggagctgc acgcgatcga
     2221 tgacgagcac gtcgatcggc tcgcgtcccg gttcgagctt cagcccgagc tgttcctgca
     2281 tggccgtgaa gagcgacggc gccgaggggt cagcggcctg tgcgggcggc gcaccgggcg
     2341 gtggcggcgg gccctcgggc gcgaaggtca ggttcaagtc gtagtagccc ttcagctccg
     2401 tcttgtccac gacgatgcgg ccgacgccgc cggtcaggtt ccgagccagc gcctccatgg
     2461 ccacggcgtt gcccgtgacc agcccctggt tcgcccgcac gctgaggccg cacggcaggt
     2521 ttccgttcgg caggcggtcc ggcatcttgc cgccggctgt cactgcggcg aagagcgccg
     2581 cgcagtcgat atcggccttc ttcatctggg ggccgagcgc gccgtccttg cgcgccagca
     2641 ccaggagata gacgggcagc gggcgcttct ccatgtgcgt caccagcccg aagcgttcgg
     2701 cgagcagcgt ctgcaacatg ccccgcgctt cgttctgatt gaacgggacc gaggccttgg
     2761 cggtgatgtc gaagcgatcc gagtcgatcc aggccgggcc atcgacgatc tggtcgttgg
     2821 tgatgttcca ggcgttgcgg atgatgtt
//
LOCUS       DASSYW010000606         5952 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1162230, whole genome shotgun sequence.
ACCESSION   DASSYW010000606 DASSYW010000000
VERSION     DASSYW010000606.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 5952)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5952)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5952
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1162230"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(61..1770)
                     /gene="yidC"
                     /locus_tag="VFN38_09690"
     CDS             complement(61..1770)
                     /gene="yidC"
                     /locus_tag="VFN38_09690"
                     /inference="COORDINATES: protein motif:HMM:TIGR03593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0051205 - protein insertion into membrane
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HET9012073.1"
                     /translation="MDKRFFLALVLTAIVIVATPLLFPGANRRAVTPAGADSARVVAT
                     QDSSSAAARPTAMPAQTAPVVAPGAVASTPVSASVETTTVRTTHSTYAFTSRGAAPIS
                     VVLDSYPSRRPLAVGRKAELVRARSPLARYRLALGADTIALDTVAMRGEQRTEGGVAT
                     LNYAADIAGRAVRIGYVFAPDSFLVRVTGTVAGAPAGSALLVDLPRTIASNEPDTLDD
                     MGHLAVSYRRRSEVKSVGFSKLDTAETRVEAGPLDWVATRNKYFLVAYRAAAKQPFSA
                     VQMRGAPRAGKVASDAIATVSQPLAADGSAKFDLYAGPQDFERLQRLGADLDQVNPYG
                     GWLQGVVQPFATIVMKALLWMKRTTQLNYGWVLVLFGVLIRLALWPLNQGAMRTSMKM
                     QRLQPELQAIQKKYSDDPKRQQEAIMKVYKDHGMSPLSPLMGCLPMLLPMPILFALYF
                     VFQNTIEFRGVSFLWLPDISLKDPYYITPLLMGVSMFVMSWIGMKGAPPNPQAKMMTY
                     TMPVMLTVLFLNFASGLNLYYAVQNIAALPQQWLLARERSQAGPAPVVVATGPGPAVK
                     RRS"
     gene            complement(1803..2012)
                     /gene="yidD"
                     /locus_tag="VFN38_09695"
     CDS             complement(1803..2012)
                     /gene="yidD"
                     /locus_tag="VFN38_09695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002474682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HET9012074.1"
                     /translation="MRQLFILLVRGYQVSLGPLLPTACRYYPSCSAYAIEALERHGAW
                     RGGWLALRRIGRCHPFRPGGYDPVP"
     gene            complement(2012..2506)
                     /gene="rnpA"
                     /locus_tag="VFN38_09700"
     CDS             complement(2012..2506)
                     /gene="rnpA"
                     /locus_tag="VFN38_09700"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: protein motif:HMM:NF013022.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004526 - ribonuclease P activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HET9012075.1"
                     /translation="MPPWPVVARRAGSSSRSVSRTSTPEHKTPEASLGFPRHARITRG
                     AEIQRIAREGKRIRTRYLEVRAAASPLARPVGARTRVGLVVPKFKRSAVARNRLKRRL
                     RELARVRLLPADLPADVVLRVRPETYDATFEGLTSDIVRALVQLTQWCSTHDVAAGPG
                     EPKA"
     gene            complement(2427..2591)
                     /gene="rpmH"
                     /locus_tag="VFN38_09705"
     CDS             complement(2427..2591)
                     /gene="rpmH"
                     /locus_tag="VFN38_09705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HET9012076.1"
                     /translation="MGKPTYRPRNTRRLKTHGFRARMETKWGRATLARRRKKGRKQLT
                     VRIPDKYAGA"
     gene            2805..4196
                     /gene="dnaA"
                     /locus_tag="VFN38_09710"
     CDS             2805..4196
                     /gene="dnaA"
                     /locus_tag="VFN38_09710"
                     /inference="COORDINATES: protein motif:HMM:TIGR00362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003688 - DNA replication origin binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA];
                     GO_process: GO:0006275 - regulation of DNA replication
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HET9012077.1"
                     /translation="MTLSATEVWTRLLDRARLELPEQTFRTWLEPTEPLALEGNTIVV
                     GSPDQFAADWNESKHAELLTSLAPVALGHPLSVVFRVHEERKTRNQMDLFVAPPATPK
                     ATEQRQKLGGINALLSERYTFENFVIGKSNELAAAAAAAVSQAPGKVYNPLFLYGDTG
                     LGKTHLMQAVAHDVLRRHPETRITFIGTEQFTNEMIASIQTRTTQDFRRRYRETDLLL
                     VDDVQFLKGKEATQEEFFHTFNALYEAGRQIILTSDRPPSEIPGLEARLVSRFQWGMV
                     ADIELPDLEHRIAILRNKALIDHLEMTIPEDVIRFIAEHVRSSVRELEGSIIKLLAYA
                     SLKHREITVDVAREALRDKLRPGESPAGAAAGLNVESIQQAVAREWGVTPEGLRSKTR
                     TKALTTPRQVAMYLMRELLGLQLVEIGATFGGRDHSTVIHSLERVSGHLKEEPSFAQR
                     VGKLRSFLEGLAG"
     gene            4499..5611
                     /gene="dnaN"
                     /locus_tag="VFN38_09715"
     CDS             4499..5611
                     /gene="dnaN"
                     /locus_tag="VFN38_09715"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HET9012078.1"
                     /translation="MRFTISREKLQEGLAAVAASVPTKTTLPVLANILVETTDKGIRL
                     SGTDLDIAVSTEVAADVETAGAITIPAKKLSEIARELPPSPVKMAAAGEQRVTLDCGR
                     SHFKILGLPRDEFPSFPTVRFDESWRIRSGDLQKLIGHTSFAVSTEESRPILNGVLWE
                     LKPDSMRMVATNGHRLAKMEVPIKSSGAPAADLIVPPKALEQIRRLFPADEELEIARG
                     DNHLGFRSPFTAVYTRLIEGPYPNYDQVIPKDNDRIAIADKVALTSALKRMSVIASDQ
                     THRIRLSFNAGILRFSVQTPDLGEATDELAVRFTGDQLDIGFNASYLLEILRYIPTEE
                     VKLTFKAPERAATVEPEGWNDPASYLCLVMPLRLVD"
     gene            5700..>5952
                     /locus_tag="VFN38_09720"
     CDS             5700..>5952
                     /locus_tag="VFN38_09720"
                     /inference="COORDINATES: protein motif:HMM:NF024937.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4126 domain-containing protein"
                     /protein_id="HET9012079.1"
                     /translation="MNALQTLAQAAGIAYAAGLNLYATVGIVGLAARLGWIGPLPGSL
                     AGLSSWWVIAVTLTLMVIEFVASLVPAVASAWDTLHSLVR"
BASE COUNT         1034 a         2032 c         1934 g          952 t
ORIGIN      
        1 tgcgcacggg gcgcgccatc gtcgtgacgg cgcgccccgg cacccccgtg atcgagggcg
       61 ctacgaccgc cgcttcacgg cggggcccgg tccggtggcc acgaccaccg gcgccgggcc
      121 ggcctgcgat cgttcacgcg cgagcagcca ttgctgcggc aaggccgcga tgttctgcac
      181 ggcgtaatac aggttgaggc cactggcgaa gttcaggaag agcaccgtga gcatcaccgg
      241 catcgtgtac gtcatcatct tggcctgcgg gttggggggc gcccccttca tcccgatcca
      301 cgacatgacg aacatcgaca cccccatgag cagcggagtg atgtagtacg ggtccttcag
      361 ggagatgtcc ggcagccaga ggaaggacac cccccggaac tcgatcgtgt tctggaagac
      421 gaaatacagc gcgaacagga tcggcatcgg caggagcatc ggcagacagc ccatcagcgg
      481 actgagaggg ctcatgccgt gatccttgta caccttcatg atcgcttcct gctgccgctt
      541 cggatcgtcg ctgtacttct tctggatcgc ctgcagctcg ggctggagcc gctgcatctt
      601 catgctcgtg cgcatcgccc cctggttgag cggccagagc gccaggcgga tcaacacgcc
      661 gaagagcacg agcacccagc cgtagttcag ctgcgtcgtg cgcttcatcc agagcagcgc
      721 cttcatcacg atcgtcgcga acggctgcac caccccctgc agccagccgc cgtacgggtt
      781 cacctggtcg aggtcggcgc ccagccgctg cagccgctcg aaatcctgcg ggccggcata
      841 gagatcgaac ttcgcgctgc cgtcggcggc cagcggctgg ctcaccgtcg cgatggcgtc
      901 gctggccacc ttgccggcgc gcggggcgcc ccgcatctgg acggccgaga agggctgctt
      961 ggccgctgcg cgataggcga cgaggaagta cttgttgcgc gtcgcgaccc agtccagcgg
     1021 ccccgcttcg acccgcgttt ccgcggtgtc aagcttggag aacccgacgc tcttcacctc
     1081 actgcgcctc cgatagctga ccgccagatg ccccatgtcg tccagggtat ccggctcgtt
     1141 ggaggcgatc gttcgcggca ggtcgacgag gagcgcgctc cctgccggcg cccccgccac
     1201 ggtgccggtg acacgcacca ggaagctgtc gggcgcgaac acatacccga tccgcacggc
     1261 gcgcccggca atgtcggcgg cgtaattcag ggtggccacc ccgccctcgg tgcgctgctc
     1321 gccgcgcatc gccaccgtgt cgagcgcgat cgtgtcggcg ccgagcgcca ggcgataccg
     1381 ggcgagtggt gagcgcgcgc gcaccagctc ggccttccgt cccaccgcga ggggccgacg
     1441 cgacggatag ctgtccagca ccacggagat cggcgccgcc cctcgcgacg tgaacgcgta
     1501 cgtcgagtgg gtggtgcgga cggtcgtcgt ctccaccgac gcggaaaccg gcgtcgaggc
     1561 gacggcgccg ggtgcgacga ccggcgcggt ctgcgccggc atggccgtcg gccgggccgc
     1621 ggcgctactg ctgtcctggg tcgcgacgac acgcgccgag tccgcaccgg ctggtgtcac
     1681 ggcgcgacgg ttcgcgcccg gaaagagcag cggcgtggcg acgatgacga tggccgtcag
     1741 cacgagggcg agaaagaagc gcttgtccat agttgggaga gcccgacgag cgcgcggctc
     1801 gctcagggca ccggatcgta gccgccggga cggaatgggt gacaccgccc gatgcggcgg
     1861 agagcgagcc agccaccgcg ccacgccccg tggcgctcga gcgcctcgat ggcatacgcg
     1921 gaacaactgg gataataacg gcacgcggtg ggtagcaggg gcccgagcga cacctgatac
     1981 ccccgcacca acaggatgaa cagttgtctc atcacgcctt cggttccccc gggccagctg
     2041 cgacgtcgtg tgtggagcac cactgcgtca attggaccag ggcgcggacg atgtccgagg
     2101 tgagcccttc gaaggtggcg tcataagtct cggggcgaac gcgcaggacg acgtcggcgg
     2161 gaagatcggc gggcaggagt cgcacccgcg ccagctcgcg aagtcgtcgc ttgaggcgat
     2221 tgcgggcgac agccgaccgc ttgaacttcg gcacgacgag gcccacccgc gtccgcgccc
     2281 ccactggacg cgcgagaggg gaagcagcag cccggacctc gagatacctg gtccggatgc
     2341 gcttcccctc tcgcgcgatg cgttggatct ccgcaccccg cgtaatgcgt gcatgccgcg
     2401 gaaagccgag tgacgcctcg ggcgtcttat gctccggcgt acttgtccgg gatacggacc
     2461 gtgagctgct tccggccctt cttgcgacga cgggccaggg tggcacggcc ccacttcgtt
     2521 tccatccgcg cacggaatcc gtgcgtcttg agccggcgcg tgttacgcgg gcggtaggtc
     2581 ggcttcccca tatctactcc aggtacggtc taggcaaggc tgtggcacag actggtaaag
     2641 ttagccgaga cagagagata ggtcaaggca gatgaagctc gcagcgagcg gcgtcggcgc
     2701 gcggcggcga aagggttccg gattcatccg tgccgagttt gctttttcca aagggccgga
     2761 atagcttcgc tcccccgccc ctcccaggtt atccacatcc cgcgatgacg ctctcggcga
     2821 ccgaagtttg gactcgcctg ctcgaccgcg cccgccttga gctcccggaa caaacgtttc
     2881 ggacctggct ggagccgact gagccactgg ccctcgaagg caacacgatc gtggtcggct
     2941 cgccggacca gttcgccgcg gactggaacg agtcgaagca cgccgagttg ctcacgagcc
     3001 tggcaccggt cgcgctcggg catcccctct ccgtggtctt ccgcgtccac gaagagcgga
     3061 agacccgcaa ccagatggac ctgttcgttg cccctccggc cacgccgaag gcgacagaac
     3121 aaagacagaa actcggcggc atcaacgcac tgctcagcga acggtatacg ttcgagaact
     3181 tcgtgatcgg caagtcgaac gagctcgccg ccgccgccgc cgctgccgtc tcgcaagccc
     3241 ccggcaaggt ctacaatccg ctcttcctct acggagacac cgggctcggc aagacccacc
     3301 tgatgcaggc cgtcgcgcac gacgtgcttc gccgccatcc ggagacgcgg atcaccttca
     3361 tcggcacgga gcagttcacc aacgagatga tcgcgtccat ccagacgcgc acgacccagg
     3421 actttcgccg gcgctatcgc gagaccgacc tcctcctcgt ggacgacgtc cagttcctga
     3481 agggaaagga ggcgacccag gaggagttct ttcacacctt caacgcgctg tacgaggccg
     3541 ggcgccagat catcctcacg agcgatcggc ccccctcgga gatccccggt ctcgaggccc
     3601 gtctcgtcag ccgcttccaa tggggcatgg tggccgacat cgagctcccc gacctcgagc
     3661 atcggatcgc catcctgcgc aacaaggcgc tgatcgacca cctcgagatg accatccccg
     3721 aggatgtcat ccgcttcatc gccgagcatg tccggtcgag cgtgcgcgag ctggagggct
     3781 cgatcatcaa gctgctcgcc tacgcctccc tgaagcaccg cgagatcacc gtcgatgtcg
     3841 cccgcgaggc gttgcgcgac aagctgcgcc cgggtgagtc ccccgcgggc gcggccgccg
     3901 gcctgaacgt cgagagcatc cagcaggcgg tcgccagaga gtggggggtc actcccgagg
     3961 ggctgagatc caagacccgc accaaggcgc tgacgacgcc gcggcaggtg gcgatgtacc
     4021 tcatgcggga gctgctcgga ctccagctgg tggagatcgg cgccaccttc gggggccgcg
     4081 accactcgac ggtgattcac agcctggagc gggtatccgg acatctcaag gaagagccgt
     4141 cgttcgccca gcgtgtgggc aagctgcgga gcttcctcga ggggcttgcc ggctagccga
     4201 atggcaccag ctttatcaac aatgcggatc cgccgttgct actttatccc cggtgcccca
     4261 cagacactcc ccgcggcgag ccggcttcgg tcgctcgccc ggtgtccgga tgtggagaac
     4321 gacatccgtc cacaggttct cgacatcgat tcgtagcacg caactcgtga tggatacggc
     4381 agttgtggag accgtccaca actccacgcc tactacggct actactgttt tcatctcttg
     4441 aatagagtaa gaacagaagc caccccggtt tgcacatact cggcacacag gagcggtgat
     4501 gcggttcacg atttcccggg agaagcttca ggaagggctg gcggccgtgg cggcgagcgt
     4561 tcccaccaag accacgctgc ccgtgctcgc gaacatcctg gtcgagacca ccgacaaggg
     4621 gatccgcctg tcggggaccg acctggatat cgccgtgagc accgaggtgg ccgccgatgt
     4681 cgagacggct ggcgccatca ccatcccggc caagaagctc tccgagatcg cgcgcgagct
     4741 cccgccgtcg cccgtgaaga tggccgcggc cggggagcag cgcgtcaccc tcgactgtgg
     4801 ccgctcccac ttcaagattc tcggcttgcc gcgtgacgag ttcccgagct ttcccacggt
     4861 gcggttcgac gagagctggc gcatccgctc cggggatctg cagaagctga tcggacacac
     4921 ctcgttcgcc gtgagcacgg aggagagccg cccgatcctc aatggcgtgc tctgggagct
     4981 caagcccgac tcgatgcgca tggtggccac gaacgggcat cgcctggcca agatggaggt
     5041 gccgatcaag tcgagcggcg cgccggcggc cgacctcatc gtgccaccca aggcgctcga
     5101 gcagattcgc cggctctttc cggccgacga ggagctggag atcgcgcggg gtgacaatca
     5161 cctcggcttc cgatcgccct tcacggcggt gtacacgcgg ctcatcgagg gtccgtaccc
     5221 caactacgat caggtcattc ccaaggacaa cgaccgcatc gcgatcgccg acaaggtggc
     5281 gttgaccagt gcgctcaagc gcatgtcggt gatcgcctcg gaccagaccc atcggatccg
     5341 gctctcgttc aacgccggga tcctccggtt cagcgtccag acacccgacc ttggcgaagc
     5401 gaccgatgag ctggccgtgc ggttcaccgg cgatcagctc gacatcggct tcaacgcgag
     5461 ctatctcctc gagatcctgc gatacattcc gacggaagag gtcaagctca ccttcaaggc
     5521 gcccgagcgg gcggcgaccg tggagcctga agggtggaac gatcccgcga gctatctctg
     5581 cctcgtgatg ccgctgcgac tggtggactg acgtggcaag catggagcat cggcctccga
     5641 tgtctccatc gcgcggcggc acgcatcccg ttgccgtatc ccggtcgtga ggtgagccca
     5701 tgaacgcgct tcagacactc gcgcaggccg cgggaatcgc ctacgcggcg gggctcaatc
     5761 tctacgccac cgtcggaatc gtgggactcg ccgccaggct cgggtggatc ggaccgctgc
     5821 cgggcagcct cgcgggactc agctcctggt gggtcatcgc cgtgacgctc acgctcatgg
     5881 tcatcgagtt cgtggcctcg ctggtgccgg cggtcgcgtc ggcatgggat accctgcatt
     5941 cgctcgtccg cc
//
LOCUS       DASSYW010000607         2777 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_151313, whole genome shotgun sequence.
ACCESSION   DASSYW010000607 DASSYW010000000
VERSION     DASSYW010000607.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2777)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2777)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2777
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_151313"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(64..1179)
                     /gene="prfB"
                     /locus_tag="VFN38_09725"
     CDS             complement(64..1179)
                     /gene="prfB"
                     /locus_tag="VFN38_09725"
                     /inference="COORDINATES: protein motif:HMM:TIGR00020.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HET9012080.1"
                     /translation="MSFAGTRIWRAAPATCGAIFDAARPELELAKIEERIAAADFWKD
                     QAEAQKVMQRRRRLEDDRDLSASLARRLDDLHVLVEWAESGEPVADDLGRALDELAGQ
                     VDAGETKKMLGGEHDRKNAIITIHPGAGGTESQDWAEMLLRMYMRWIERRGFKRELID
                     LQPGDEAGIKSATFTVYGDYAYGLLLAEAGVHRLVRISPYDQASRRHTSFASLYVWPE
                     LPEDVDVEVDEKDLRVDTYRSSGAGGQHVNVTDSAVRITHLPTGIVVSSQNERSQHRN
                     RDSAMKVLRARLYDLKLREQQAELERISGEKKDIAFGSQIRSYVLHPYQMVKDHRTKE
                     QVGDVARVLDGDLDQFVKAYLMKKAAGTLSAATADED"
     gene            complement(1249..>2777)
                     /gene="lnt"
                     /locus_tag="VFN38_09730"
     CDS             complement(1249..>2777)
                     /gene="lnt"
                     /locus_tag="VFN38_09730"
                     /inference="COORDINATES: protein motif:HMM:TIGR00546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006497 - protein lipidation [Evidence
                     IEA];
                     GO_process: GO:0042158 - lipoprotein biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HET9012081.1"
                     /translation="PLALLSGALLALSFPKFGHPACAWLALTPLLVALSRSPRMRPRR
                     AFFLGLTAGAVAFAGTLYWLVETMTTFGGLAAPIAVLAAALLVAYLSLFPAAFAVVLG
                     RLARTLGPSTAMACAPPVWIASELGRQYVWDGFPWALLGYSQVTVLPIAQLASVTGVY
                     GVSALLVLASSALAALAVERGRTRVWLPAVATITIAVVGLWGRARVADGTLASSGESV
                     RVAVVQGNIAQDEKWDPALRDAIVSRYLEMTRRAIQGGATFIIWPESSMPVYFEEDLV
                     RASGVRRLARDHGVTLLIGSDQVERARTDAPVESLENRFFNAAFLVKPDGTTGGVYRK
                     MHLVPFGEYVPLQRLLFFVGPIVEAVSNFTPGREAALLPVGAHKVSTAICYEVIYGSL
                     IREFVRGGSELLTTITNDAWYGRSSAAYQHWEQASMRAIEGGRYLARAANTGISGFVD
                     PYGRVLQKSALFEQTTLVADVRYVQARTIYARIGDLMAWLALAFTLAALLASRRIRGT
                     "
BASE COUNT          454 a          953 c          944 g          426 t
ORIGIN      
        1 tgccgctccc ccgtcatcga gctggtcaac ccgcggcgct ggtgcgctgc ccgcgatctc
       61 ggctcagtcc tcgtccgccg tcgcggcgga gagcgtcccg gccgccttct tcatcaggta
      121 ggccttgacg aactggtcca agtcaccgtc gaggacacgc gcgacgtcgc ctacctgctc
      181 cttcgtccgg tggtccttca ccatctggta cggatgcagc acgtagctgc gaatctggct
      241 gccgaacgcg atgtccttct tctcgccgct gatccgctcg agctccgcct gctgttccct
      301 gagcttgaga tcgtacagac gggcgcgcag caccttcatc gcggagtcgc ggttgcgatg
      361 ctgcgagcgc tcgttctgcg acgacacgac gatgccggtg ggcagatggg tgatgcggac
      421 ggcggagtcg gtaacgttga catgctggcc gccggccccg gacgagcggt aggtgtcgac
      481 gcgaagatct ttctcgtcga cttccacgtc gacgtcctcc ggcagttcgg gccagacgta
      541 gagggatgcg aacgacgtat ggcggcgtga cgcctggtcg tacggcgaga tgcgcaccag
      601 ccggtggacg ccggcctcgg cgagcagcag cccgtaggcg tagtcgccgt acacggtgaa
      661 ggtcgcgctc ttgatccccg cctcgtcgcc gggctgcaga tcgatcagct cgcgcttgaa
      721 gccgcggcgc tctatccagc gcatgtacat gcgcaggagc atctccgccc agtcctgcga
      781 ctcggtgccg ccggcgcccg gatgaatggt gatgatggcg ttcttgcgat cgtgctcgcc
      841 gccgagcatc ttcttggtct cgccggcatc gacctgcccg gcgagctcgt cgagggcgcg
      901 gccgaggtcg tcggcgaccg gctcgccaga ttcggcccat tcgacgagga cgtgcagatc
      961 gtcgaggcgc cgcgccaacg acgcgctcag gtcgcgatcg tcctcgaggc ggcggcggcg
     1021 ctgcatgact ttctgcgcct ccgcctggtc cttccagaaa tcggcggccg cgatccgttc
     1081 ttctattttg gcgagctcga gctcggggcg ggcggcgtca aagatggctc cgcaggtcgc
     1141 tggcgcggcg cgccagatcc tcgtacctgc gaagctgatc gtccagttgc aaggccaaac
     1201 gtgtgtctcc ttggtgcggt cgggccgtga gcgcgtgaat tcacgcgttc acgtaccccg
     1261 tattctacgc gacgccagga gcgcggcgag ggtgaacgcc agcgcgagcc acgccatcag
     1321 gtcgccgatg cgcgcataga tggtccgcgc ctgcacatag cggacgtcgg cgacgagcgt
     1381 cgtctgctcg aacagcgcgg acttctgcag cacccggccg tacgggtcga cgaagccgct
     1441 gatcccggtg ttggcggccc gtgcgaggta acggcccccc tcgatcgccc gcatcgaggc
     1501 ctgctcccag tgctggtagg ctgccgacga tcgaccgtac caggcgtcgt tcgtgatcgt
     1561 cgtcagcagc tcgctgccgc cgcggacgaa ctcgcggatc agactgccgt agatgacctc
     1621 gtagcagatc gccgtgctca ccttgtgcgc gccgaccggc agcagcgccg cctcgcgacc
     1681 cggcgtgaag ttggagaccg cttcgacaat cgggccgacg aagaacaaga gccgctgcag
     1741 cggcacgtac tcgccgaacg gcacgaggtg catcttgcgg tagacgccgc cggtggtccc
     1801 gtcaggcttg acgaggaacg ccgcgttgaa gaagcggttc tcgagcgact cgaccggcgc
     1861 atccgtgcgc gcccgttcga cctgatcgga gccgatgaga agcgtgacgc cgtgatcgcg
     1921 cgccaggcgg cgcacgccgc tggcgcggac gagatcttcc tcgaagtaca ccggcatcga
     1981 cgattccggc cagatgatga acgtcgcccc gccctggatc gcgcgccgcg tcatctcgag
     2041 atagcggctg acgatggcgt cgcgcagcgc gggatcccac ttctcgtcct gtgcgatgtt
     2101 cccctgcacg accgccacgc ggaccgactc gccggaggac gccagcgttc catcggcgac
     2161 acgggcgcgt ccccacaggc cgacgacggc aatcgtgatg gtcgcgactg ccggcagcca
     2221 tacgcgcgtg cggccgcgct cgaccgccag cgccgcgagc gcggacgagg cgagcaccag
     2281 cagcgccgac acgccgtaga cgccggtaac gctcgcaagc tgggcgatcg gcaagacggt
     2341 cacctggctg tagccgagca gggcccaggg aaaaccgtcc cacacgtact gacgtccgag
     2401 ctcgctcgcg atccacaccg gcggagcgca cgccatcgcg gtggacggac caagggtcct
     2461 ggcgaggcgg ccgagaacga ctgcgaacgc cgccggaaac agcgacaggt acgcgaccag
     2521 cagcgccgcc gcaaggaccg cgatcggcgc cgccagcccg ccgaacgtcg tcatcgtctc
     2581 gacgagccag tagagcgtgc ccgcgaaggc caccgcgcct gccgtgagac cgaggaagaa
     2641 cgcccggcgt gggcgcatcc gcggcgagcg ggaaagcgcg accagcagcg gcgtcaaagc
     2701 cagccacgcg caggcgggat ggccgaattt cggaaaactg agcgcgagga gcgcgcccga
     2761 gagcagcgct agcgggt
//
LOCUS       DASSYW010000608         2391 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_855728, whole genome shotgun sequence.
ACCESSION   DASSYW010000608 DASSYW010000000
VERSION     DASSYW010000608.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2391)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2391)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2391
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_855728"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..939
                     /locus_tag="VFN38_09735"
     CDS             <1..939
                     /locus_tag="VFN38_09735"
                     /inference="COORDINATES: protein motif:HMM:NF020390.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1800 family protein"
                     /protein_id="HET9012082.1"
                     /translation="QRPQENFGREIMELFTLGVGHYVEEDVYAAARVFTGWNLRLVGD
                     PNTTAGYYEFVYIPNNHDPTAKTFTFPIYRDGSKTIPARAASAGMQDGIDFINALATH
                     PATAERLARKMWNFFVSEALPPDPDYLRGATSIYFANDTRIQPLVQYTLQSRWFQNPA
                     NWHSRYAWPVEFAVRAVKEVGFLGFSVDNMRAPLIAMGQTLFEPPDVNGWELGQGWFS
                     TGAMLSRMNFASTIAANQRFNLANAAANAKDSPDTFMDYFLDRLSPAPFDGEPLDRLK
                     AYLVDGGAWTGSTAQLQTKGAGLARLIVGSAEYQLM"
     gene            952..2220
                     /locus_tag="VFN38_09740"
     CDS             952..2220
                     /locus_tag="VFN38_09740"
                     /inference="COORDINATES: protein motif:HMM:NF019040.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1501 domain-containing protein"
                     /protein_id="HET9012083.1"
                     /translation="MATSPRVSRRTFIRGGVSAFTLTFAAPAFLSDIARAQGAAARNL
                     VVVYLSGGNDALSTVVPYQDSFYYSRRPTIAVPAGQVLQIGTDSSGRALGLHPRLTGL
                     REIFNAGRLAVIQRTGYANSSRSHFQGYDIWGTGDPALKVTDGWLGRYLETLPQDALL
                     GWSATQELPRALASREVSVPAIPNAATYAFASPNVGVEATRERAAATAIASHLPADRP
                     QLAFVNGSAQAAFATLDRVASVSTYTGSVAYPNNGFALALRTVAGAMVRGVGTRVFWV
                     QTGGYDTHSGQGAAGGGAYANLMGTFGDGLLAFYNDLRNQNLLNDTLVLQFSEFGRRI
                     SENGSGGTDHGAGAVMMAMGGAVRGGIYGTSASLDPAPSNPTLENNGGDVKYETDFRS
                     VYARVLDGWLGASSASVLGGDFRGGAPPIV"
BASE COUNT          365 a          851 c          796 g          379 t
ORIGIN      
        1 cagcggccgc aggagaactt cggccgcgag atcatggagc tcttcacgct cggcgtcggc
       61 cactacgtcg aagaggacgt ctacgccgcg gctcgcgtgt tcaccggatg gaatctccgg
      121 ctggtgggcg accccaacac cacggccggc tactacgagt tcgtctacat cccgaacaac
      181 cacgacccga cggccaagac gttcacgttc ccgatctacc gtgacggctc gaagacgatt
      241 cccgcgcgcg cggccagcgc cggcatgcag gacggcatcg acttcatcaa cgcgctcgcc
      301 acgcacccgg ccacggccga gcggctcgcg cgcaagatgt ggaacttctt cgtgagcgag
      361 gcgctgccgc ccgatccgga ctatctgcgc ggcgccacga gcatctactt cgccaacgac
      421 acgcgcatcc agccgctcgt gcagtacacg ctgcagtcgc gctggtttca gaatcccgcc
      481 aactggcact cgcgctacgc ctggccggtg gagtttgccg tccgcgccgt gaaggaagtg
      541 ggcttcctgg gcttctcggt ggacaacatg cgggcgccgc tcatcgcgat gggccaaacg
      601 ctcttcgagc ctccagacgt gaacggctgg gagctgggcc aggggtggtt ctccacgggc
      661 gcgatgctgt cgcgcatgaa cttcgcctcc acgattgccg ccaaccagcg cttcaacctg
      721 gcgaacgcgg cggcgaacgc caaggactcg cccgacacgt tcatggacta cttcctcgat
      781 cggctgtcgc cggcgccgtt cgacggcgag ccgctcgacc ggctcaaggc gtatctcgtg
      841 gacggcggcg cgtggaccgg atccaccgcg cagctccaga cgaagggcgc ggggctggca
      901 cggctgatcg tcgggtcggc cgaatatcag ttgatgtagg ggagcgcgca catggccacg
      961 tcacctcgcg tctcccgccg caccttcatc cgtggcggtg tgtcggcctt caccctcacg
     1021 tttgccgcgc cggcgttcct ctccgacatc gcgcgcgcgc agggggccgc cgcgcgcaat
     1081 ctggtcgtgg tgtatctgag cggcggcaac gacgcgctca gcaccgtcgt gccgtatcag
     1141 gactcgttct attacagccg ccggcctacg attgcagtgc ccgcgggcca ggtgctgcag
     1201 atcggcacgg actcgtcggg gcgcgcgctc ggcctgcatc cgcggctcac cggtctgcgg
     1261 gagatcttca acgccggccg gctcgcggtg atccagcgca ccggctacgc caactccagc
     1321 cgctcgcact tccagggcta cgacatctgg ggcacgggcg atccggcgct gaaggtcacg
     1381 gacggctggc tcggacgcta ccttgaaacc ttgccgcagg acgccctgct gggctggtcc
     1441 gccacgcagg agctgccgcg cgcgctggcg tcgcgcgagg tgagcgtgcc ggcgattccc
     1501 aatgccgcca cctacgcgtt tgccagcccc aacgtggggg tcgaagcgac gcgcgagcgc
     1561 gccgcggcca cggcgattgc gtcgcacctg cccgccgacc gtccgcaact cgctttcgtg
     1621 aacggcagcg cgcaggcggc gtttgccacg ctcgatcgcg tggcgtcggt ctccacctac
     1681 accggcagcg tggcgtatcc caacaacggc ttcgcgctgg cgctgcgcac cgtggcgggc
     1741 gcgatggtcc gaggcgtcgg cacgcgcgta ttctgggtgc agaccggcgg ctacgacacg
     1801 cattcgggtc agggcgcggc cggcggcggc gcctacgcca acctgatggg cacgttcggc
     1861 gacggcctgc tggcgttcta caacgacctc cgcaatcaga acctgctgaa cgacacgctg
     1921 gtcctgcagt tctcggagtt cggacgccgc atcagcgaga acggcagcgg cggcaccgac
     1981 cacggcgccg gcgccgtgat gatggcgatg ggcggcgcgg tgcgcggcgg catctacggc
     2041 acgtccgcgt cgctcgaccc ggcgccgtcg aaccccactc tcgagaacaa cggcggcgac
     2101 gtgaagtacg agaccgattt ccggtcggtc tatgcccggg tgctcgacgg ctggctgggc
     2161 gccagctcgg cctctgtact gggcggcgac ttccgcggcg gcgccccgcc gatcgtatga
     2221 ccaccctagg tagccccaga ccttcaggtc cgccccgacc atccaaacgc cgccgacagc
     2281 cgtagatcgt cttggacaat ggtgatctgg ctgtttgcgg ccgtggtcgg cttccccggc
     2341 cggtcgtccg aatcgcaggc ggaggaccag cgctccttgc agcgggtcgc g
//
LOCUS       DASSYW010000609         2737 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1564202, whole genome shotgun sequence.
ACCESSION   DASSYW010000609 DASSYW010000000
VERSION     DASSYW010000609.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2737)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2737)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2737
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1564202"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            395..>2737
                     /locus_tag="VFN38_09745"
     CDS             395..>2737
                     /locus_tag="VFN38_09745"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vitamin B12-dependent ribonucleotide reductase"
                     /protein_id="HET9012084.1"
                     /translation="MPLSATPPSGPVTLSSNARTVLEKRYLVKDKTGKPTETPESLFW
                     RVATVVAEADGRYGASEGAVQAVAEEFYFLMTQRRFEPNSPTLMNAGRPLGQLSACFV
                     LPVEDALANGKNGIYDTLKSMAIIHQSGGGTGFGFSKLRAKGSMVRSTTGVASGPISF
                     MKLYDASTDAVKQGGTRRGANMGILRVDHPDVLDFIACKEDLTQVTNFNISVAVTKKF
                     MDALKNKTSYDLYDPSTGAVVGQLDANEVWDKMILGAWRTGEPGCFFIDEANRYNPVP
                     HLGAYEATNPCGEQPLLPYDVCNLGSINVGLYVQDGVMNWDAFRRDIQLSTHLLDNII
                     DVNKYPLPEIDALSKRIRRIGLGVMGFADALIRLGIAYDSAEGVAFGKKVMEFLDVES
                     KKESERLANERGPVPEWARSIWGPVETCARDENGQRIRPMQLLRNCNVTTVAPTGTIS
                     IIAGCSSGLEPIFAVAFMRNQAGVMMPDVNEDFVAIAKKEGWYSEALMERIAKEGHVN
                     FPEIPAKWQKVFVTANAIAPEWHVRMQAAFQEHCDSAISKTTNFSHAATVEDVRAIYE
                     MAYDMKCKGVTVYRDGSRDAQVLSTGATEKAKAERDKPAASENRRELGELMGQMAEKD
                     AEIDRLRKALFDAEAENLQRRAKRSRPDKLRGTTHRLETPLGTMFVNITEDDKNQPFE
                     VFITLGKAGGSAMADAEAMGRLISLALRSGIPIMEVHRQLRGISSDRAVGLGPNKVLS
                     VPDAIGIALEQWWRDKQGVQQEMLPTHTPPGGTPIPQSIVS"
BASE COUNT          504 a          906 c          912 g          415 t
ORIGIN      
        1 cccctcactg tcggcttgcc gtcgttcctc gcgcgtcgag cgagctcggc ggcattcggc
       61 gcaagtcgtt cactggcggg aacttggggg cgctttcggg gatagacaat ctgctgtcgc
      121 catcacgttc gaagagcggt ccaaggcggt ccacatgttt tcaacgtcca tgtgcgacta
      181 attccacctt cgtgatgcat acagtagaag tcgttgcatt gcttgccttt acctcaggac
      241 tggcgcggaa tcacgagcgc gggtaacatg acccccccac gagcggcgca ccgcggtggc
      301 cagtccaagt cgttcccgcc ttgccggacc ctcccagcag gacccgtcgg ggcgtatcgt
      361 caccatatcg ttttaccata gggagaagtc gccaatgccc ctgtccgcca ccccgccgag
      421 cggtcccgtc acgctctcgt cgaacgcgcg caccgtgctc gagaagcgct acctcgtgaa
      481 ggacaagacg gggaagccga ccgagactcc ggagtcgctg ttctggcgcg tggcgaccgt
      541 ggtggccgag gcggatggcc gctacggcgc gagcgagggg gcggtgcagg cggtggccga
      601 ggagttctac ttcctcatga cccagcgccg gttcgagccc aactccccca cgctcatgaa
      661 cgccggccgc ccgctcggcc agctctccgc ctgcttcgtg ctgccggtgg aggacgccct
      721 ggccaacggg aagaacggca tctacgacac gctcaagtcg atggcgatca tccaccagag
      781 cggcggcggc accggcttcg gcttctccaa gctgcgcgcc aagggctcca tggtgcggtc
      841 caccaccggc gtcgccagcg ggccgatctc gttcatgaag ctgtacgacg cgagcaccga
      901 cgcggtgaag caggggggca cccggcgcgg cgccaacatg ggcatcctgc gcgtcgacca
      961 tcccgacgtg ctggacttca tcgcctgcaa ggaagacctc acgcaggtga cgaacttcaa
     1021 catctccgtc gcggtgacga agaagttcat ggacgcgctg aagaacaaga ccagctacga
     1081 cctctacgat cccagcaccg gcgccgtcgt cggccagctc gacgccaacg aggtgtggga
     1141 caagatgatc ctgggcgcgt ggcgcaccgg ggagccgggc tgcttcttca tcgacgaggc
     1201 caaccgctac aacccggtgc cgcacctcgg cgcctacgag gccacgaacc cctgcggcga
     1261 gcagccgctg ctgccgtacg acgtctgcaa cctcggctcc atcaacgtcg ggctgtacgt
     1321 gcaggacggc gtgatgaact gggacgcctt ccggcgcgac atccagctca gcacgcacct
     1381 gctcgacaac atcatcgacg tcaacaagta tccgctgccg gagatcgacg ccctctccaa
     1441 gcgcatccgc cgcatcggcc tgggggtgat gggcttcgcc gacgcgctca tccgcctcgg
     1501 catcgcctac gactcggccg agggcgtcgc cttcggcaag aaggtgatgg agttcctcga
     1561 cgtcgagtcg aagaaggaga gcgagcggct cgccaacgag cgcggccccg tcccggagtg
     1621 ggcgcggtcc atctggggcc ccgtcgagac ctgcgcgcgc gacgagaacg ggcagcgcat
     1681 ccgtccgatg cagctcctgc gcaactgcaa cgtcaccacc gtggcgccca ccggcaccat
     1741 cagcatcatc gccggctgct cgagcgggct ggagcccatc ttcgccgtgg cgttcatgcg
     1801 caaccaggcc ggcgtgatga tgccggacgt gaacgaggac ttcgtcgcga tcgcgaagaa
     1861 ggaaggctgg tacagcgagg cgctgatgga gcgcatcgcc aaggaagggc atgtcaactt
     1921 ccccgagatc ccggcgaagt ggcagaaggt gttcgtcacg gcgaacgcca tcgcccccga
     1981 gtggcacgtg cgcatgcagg ccgccttcca ggagcactgc gactcggcga tcagcaagac
     2041 gaccaacttc tcgcacgccg cgaccgtcga ggacgtgcgc gcgatctacg agatggcgta
     2101 cgacatgaag tgcaagggcg tcaccgtgta ccgcgacggc agccgcgacg cgcaggtgct
     2161 gagcaccggc gcgacggaga aggcgaaggc cgagcgtgac aagcccgcgg cgagcgagaa
     2221 ccgtcgcgag ctcggtgagc tgatggggca gatggccgag aaggacgccg agatcgatcg
     2281 gctgcggaag gcgctgttcg atgcggaggc cgagaacctt cagcgtcgcg cgaagcgttc
     2341 gcgtcccgac aagctccgcg gcacgacgca ccgtctggag accccgctcg gcacgatgtt
     2401 cgtgaacatc acggaggacg acaagaacca gccgttcgag gtgttcatca ccctcggcaa
     2461 ggcgggtggt agtgcgatgg ccgatgcgga ggcgatgggc cgcctgatct cgctcgcgct
     2521 gcgcagcggc atcccgatca tggaagtgca ccgtcagctg cgcggcatct cgagtgatcg
     2581 cgcggtcggt ctcgggccga acaaggtgct cagcgtgccg gatgcaatcg gtattgcgct
     2641 ggagcagtgg tggcgggaca agcagggggt gcagcaggag atgctgccga cgcacacgcc
     2701 gccgggtggg acgccgatcc cgcagtcgat cgtgtcg
//
LOCUS       DASSYW010000610         3501 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1672769, whole genome shotgun sequence.
ACCESSION   DASSYW010000610 DASSYW010000000
VERSION     DASSYW010000610.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3501)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3501)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3501
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1672769"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1119)
                     /gene="nirK"
                     /locus_tag="VFN38_09750"
     CDS             complement(<1..1119)
                     /gene="nirK"
                     /locus_tag="VFN38_09750"
                     /EC_number="1.7.2.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR02376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050421 - nitrite reductase (NO-forming)
                     activity [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="copper-containing nitrite reductase"
                     /protein_id="HET9012085.1"
                     /translation="MTTSFVATRTPRAPLARTLLATVFAAAALLATASLAGCGSPADA
                     REAGGRAVVPVRVPSDEIVGQETAVLTAAPAVPAPITRTHATRVIVNLDVIEKPMRLA
                     DGVEYTMWTFGGSVPGTFIRVREGDLVELHLKNAAGSTMPHNIDLHAVTGPGGGAHAS
                     LTLPGHETVFTFTAMNPGLYIYHCATSPVPMHMANGMYGMILVEPKAGLPKVDREYYV
                     MQSEFYTKGKFGEPGMQSLDMEKGIEERPTYVVFNGSVGALTGDKALQAKVGERVRLF
                     VGDAGPNLTSSFHVIGEVFDNVYTEGGSVAVQHNVQTTLIPAGGSAIVEFGVEKPGDL
                     ILVDHSIFRAFNKGALGMLHVSGPDDARVFASVKGTGAA"
     gene            complement(1152..1553)
                     /locus_tag="VFN38_09755"
     CDS             complement(1152..1553)
                     /locus_tag="VFN38_09755"
                     /inference="COORDINATES: protein motif:HMM:NF014173.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HET9012086.1"
                     /translation="MLSTTSDYALRAVLFLARRRDGRALRADEIADATAAPRNYLAKT
                     LNALAKAGIVTSARGPQGGFALAGDPASITLARVIDCFDEPRPHHRCLLGTAPCDPEH
                     PCAAHSRWTAIMDARRTPLANTTIADLLSPL"
     gene            complement(1766..2758)
                     /locus_tag="VFN38_09760"
     CDS             complement(1766..2758)
                     /locus_tag="VFN38_09760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012087.1"
                     /translation="MKRTLIGLVFVAHGLAHSGPGIWASAVGPEWFVVPLWWLAEVGF
                     LVAGFGLLGVPWCRRVWEPSALVAAVASIMMHQRLGSVALAFGLVLDVIIIVVGLRWG
                     ESSLLASVSQRPAATVHPRRHRVTSALASALVLWVALVIPLRSWHIRWGTTLAERRAT
                     LPGDEVVRQANYRVDHAVTIDAPADSVWPWLAQLGQDRGGFYSYDRLERLIGAEIRNA
                     NRVHPEWQVRQPGDLVRATQPGYLGGLFGENPGWRVVGLVPGRALVLEQWGAFVLQPM
                     DSARTRLYVRTRGEGTPNLASTLVAPLGLLMFEPAHFVMQRRMLLGIKERAEHG"
     gene            complement(2755..3258)
                     /locus_tag="VFN38_09765"
     CDS             complement(2755..3258)
                     /locus_tag="VFN38_09765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012088.1"
                     /translation="MRIALTCLAVVLSAGCRTQNLPVQLQGEPTAIAWLAGDWGGEYW
                     GGQSGRSGTINFFLAPGTDSAYGDVTMLTPVGRPLVPVDAMDEHRLHVRAAQSLRIDF
                     VSVAGGEVTGMLEPYLSPDCDCAVSTTFRGRVSGNVISGTFVTSSKTGLRSEGLWRVT
                     RRGTTQP"
BASE COUNT          549 a         1162 c         1305 g          485 t
ORIGIN      
        1 ggccgcgccg gtgcccttca ccgaggcgaa cacgcgggcg tcgtccgggc cgctcacgtg
       61 cagcatgccg agggccccct tgttgaaggc gcggaagatg gagtggtcca cgaggatcag
      121 gtcgcccggc ttctcgacgc cgaactcgac gatcgccgag ccgcccgcgg ggatgagcgt
      181 cgtctgcacg ttgtgctgga ccgccaccga gccgccctcg gtgtacacgt tgtcgaacac
      241 ctcgccgatg acgtggaagg agctcgtgag gttcgggccg gcgtcgccga cgaagagccg
      301 cacgcgctcg ccgaccttgg cctggagcgc cttgtcgccg gtgagggcgc ccacgctgcc
      361 gttgaacacg acgtaggtgg gccgctcctc gatgcccttc tccatgtcga gcgactgcat
      421 gcccggctcg ccgaacttgc ccttcgtgta gaactcgctc tgcatcacgt agtactcgcg
      481 atccaccttg ggcaggccgg ccttgggctc cacgaggatc atgccgtaca tcccgttggc
      541 catgtgcatc ggcacgggcg aggtggcgca gtggtagatg tagaggcccg ggttcatcgc
      601 ggtgaaggtg aacaccgtct cgtggccggg cagcgtgagc gaggcgtgcg cgccgccgcc
      661 ggggccggtg accgcgtgca ggtcgatgtt gtggggcatc gtgctgccgg cggcgttctt
      721 caggtggagc tccacgaggt cgccctcgcg gacccggatg aaagtgcccg gcaccgagcc
      781 gccgaaggtc cacatcgtgt actcgacgcc gtcggcgaga cgcatcggct tctcgatgac
      841 gtcgagattg acgatcacgc gcgtggcgtg agtgcgcgtg atgggtgccg gaacggcggg
      901 ggcggcggtg agcaccgcgg tctcctggcc gacgatctcg tccgagggga cgcgcacggg
      961 cacgacggcg cggccgcccg cctcacgggc atcggcagga gaaccgcagc cggccaggga
     1021 ggcggtggcg aggagcgcgg cggcggcgaa gacggtggcg agcagcgtcc tcgcgagggg
     1081 cgcgcgaggg gtgcgggtgg cgacgaagga agtggtcatg atcgcatcca aaaggaagga
     1141 gggggacgga gtcagagtgg cgacagcaga tcggcgatgg tcgtgttcgc gagcggggtg
     1201 cgcctcgcgt ccatgatcgc cgtccagcgg gaatgcgcgg cgcaggggtg ctcggggtcg
     1261 cacggtgcgg tgccgaggag gcagcggtgg tgcgggcggg gctcgtcgaa gcagtcgatg
     1321 acgcgggcga gggtgatgga cgcggggtcg ccggcgaggg cgaacccgcc ctgcgggccg
     1381 cgcgcgctcg tgacgatccc ggccttggcg agcgcgttga gcgtcttcgc gagatagttg
     1441 cgcggcgcag cggtggcgtc ggcgatctcg tcggcgcgca gggcccggcc atcccgccga
     1501 cgggcgagga agaggacggc gcgaagggcg tagtcggagg tggtgctcaa cacgggcgga
     1561 cctcgtggaa aagccagttt ctcatctcga tatgagaatc gactttttcg ggctgcccgg
     1621 gcgtcgggaa gaggccggaa atcgtgtccg aatctcgccc cggcggtgtc gggagatttc
     1681 cggacgagcc cgtcgcgagc cgctcgacag cgcctcccgg ggcgtgaacg gggacagccc
     1741 cggcctcccg ctccgcgata ctccgtcagc cgtgctccgc ccgctccttg atccccagca
     1801 gcatgcgacg ctgcatgacg aaatgcgccg gctcgaacat cagcagtccc agcggtgcga
     1861 cgagggtgct cgccaggttc ggcgtcccct ccccgcgcgt gcgcacgtac agcctcgtcc
     1921 ttgccgagtc catcggctgg agcacgaagg cgccccactg ctcgagcacg agcgcgcgac
     1981 cgggaacgag gccgacgacc cgccaaccgg gattctcgcc gaacagcccg cccagatatc
     2041 cgggctgggt ggcgcgaacc aagtcaccgg gctgcctcac ctgccattcc ggatgcaccc
     2101 ggttggcgtt gcgaatctcg gcgccgatga ggcgctccag ccggtcgtag ctgtagaagc
     2161 ctccccggtc ctgtccgagc tgcgcgagcc agggccacac cgaatcggcg ggcgcgtcga
     2221 tggtgacggc gtgatcgacg cggtagttcg cctgtcgcac cacctcgtcg ccgggcaggg
     2281 tcgcgcgccg ctctgcgagc gtggtgcccc agcggatgtg ccaggagcgg agcgggatga
     2341 cgagcgccac ccagagcacc agggcgctcg cgagggcgga cgtcacgcgg tgccggcgcg
     2401 gatgaacggt ggcagcaggt cgctgtgaca cggaggccag cagcgaggac tctccccatc
     2461 ggaggccgac cacgatgatg atcacgtcga gcacgagccc gaacgcgagc gccacgctgc
     2521 cgaggcgctg gtgcatcatg atggaggcga cggcggcgac gagcgcggat ggctcccaca
     2581 ccctgcggca ccacggcacg ccgagcaggc cgaagccggc gaccaggaag cccacctcgg
     2641 ccagccacca gagcgggacg acgaaccact ccggtcccac cgcgctcgcc cagatgccgg
     2701 gacccgagtg cgcgaggccg tgcgccacga agacgaggcc gatgagggtg cgcttcatgg
     2761 ctgcgtggtg ccgcggcgcg tgacgcgcca caagccttcg gagcgcagcc cggtcttgct
     2821 gctcgtgacg aaggtgccgc tgatcacgtt gcccgagacg cgcccgcgga aggtcgtcga
     2881 gacggcgcag tcgcagtccg ggctcaggta cggctcgagc atgcccgtga cctcgccccc
     2941 ggccacggag acgaaatcga tgcggagcga ctgggcggcg cgcacgtgca gccggtgctc
     3001 atccatggca tcgacgggca cgagcggccg tcccaccggg gtgagcatgg tgacgtcccc
     3061 gtacgcgctg tcggtgccgg gcgcgaggaa gaagttgatc gtgccagagc ggcccgactg
     3121 gccgccccag tactcgccac cccagtcgcc ggcgagccag gcgatggcgg tgggctcccc
     3181 ctggagctgc accggcaggt tctgggtccg acacccggcg gacaggacga cggcgaggca
     3241 cgtcagggcg atgcgcatgg agcctcctgt ggatggccgt gcgacgcgcg cacgtgacgc
     3301 aggccggttg ccgagacttc cctcgcgaac gctagggcgg atgtgcaccg cgctccatcg
     3361 gagttcttcc tcgatctcgt cgggagttgc ccgcgagctc gcgccgcgct cagccgatga
     3421 ggcgcagcag catgcggcgc ttcaccatct caaccattcc gagatacgcc acggtcacgc
     3481 cggcgacgaa cgcgagcagc g
//
LOCUS       DASSYW010000611         5745 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1335048, whole genome shotgun sequence.
ACCESSION   DASSYW010000611 DASSYW010000000
VERSION     DASSYW010000611.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 5745)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5745)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5745
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1335048"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..556)
                     /locus_tag="VFN38_09770"
     CDS             complement(<1..556)
                     /locus_tag="VFN38_09770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012089.1"
                     /translation="MSRRLRVLLLLALAAACTRGDEAQRTTGAGTTVAGTRIATSRPG
                     PAGEWSLPAGDYANSRFSELDQITAANAKNLHAAWTFSTGVLRGHEGSPLVVQNTMYV
                     VTPYPNVSYALDLTQEGQPLKWKARPPNAQTAVGLACCDVVNRGAAYADGKIFYNLLD
                     GHAVAIDAATGKLLWRTKMGDLTRG"
     gene            complement(549..1049)
                     /locus_tag="VFN38_09775"
     CDS             complement(549..1049)
                     /locus_tag="VFN38_09775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012090.1"
                     /translation="MPDLKRISNEAIPRAVQKAERYRLLNQSWATESICLDILEVDPT
                     NQPVLVMLLLAITDQFGAQSRELASRAREVLGRITDPYQKAYYAGIIDERLGHAHLAQ
                     GIMHAEAMAWESLKDAMDSFEKAERLRQPGNDDAILRWNTCLRTIQRLRLAEPAEGQY
                     EPSFGE"
     gene            complement(1134..1973)
                     /locus_tag="VFN38_09780"
     CDS             complement(1134..1973)
                     /locus_tag="VFN38_09780"
                     /inference="COORDINATES: protein motif:HMM:NF009052.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase/fumarate reductase
                     iron-sulfur subunit"
                     /protein_id="HET9012091.1"
                     /translation="MTVPTAPPTTGAVDAYTAAQAAQDAAVGHGARSFRLWRGADGSG
                     AFADYTTEVNEGMVVLDAVQQIQAEQANDLAVRWNCKAGKCGSCSAEINGKPKLMCMT
                     RLDDLPLDEPVTVEPMRAFPHVRDLVTDVSWNFRVKPRIQPFTPRAPDAPDGTWRIAQ
                     RDVERVQEFRKCIECFLCQDVCHVLRDHHMHDEFVGPRFLVYAAALEMHPLDTADRTT
                     ELKEQFGIGYCNITKCCTKVCPEHITITDNAIIPLKERVVDRHYDPLAALVRLVRGPR
                     KSG"
     gene            complement(1970..3787)
                     /locus_tag="VFN38_09785"
     CDS             complement(1970..3787)
                     /locus_tag="VFN38_09785"
                     /inference="COORDINATES: protein motif:HMM:NF005866.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase/succinate dehydrogenase
                     flavoprotein subunit"
                     /protein_id="HET9012092.1"
                     /translation="MLEHQAVDHDVLVIGAGGAGLRAAIEAAASGLSVGVVCKSLLGK
                     AHTVMAEGGVAAALANVDDRDSWRVHFADTMRGGQYVNNWRMAELHAREAPARVNELE
                     AWGALFDRTTDGRILQRNFGGHRYPRLAHVGDRTGLEMIRTLQDHGIHKGMDVHMECT
                     VLTLLRDGERIAGAFAYDRERGRFRLFRAKSVILATGGVGRAYSITSNSWEYTGDGHA
                     LAYLAGAALQDMEFVQFHPTGMIWPPSVRGILVTEGVRGEGGVLRNREGKRFMFENIP
                     DNYKPQTADNEEEGWRYTQGDKDARRPPELLTRDHVARMIVREVKEGRGSPHGGVYLD
                     ISWLKDRLPNAAEHIRKKLPSMYHQFMQLAGIDITKEAMEIGPTTHYIMGGIRVDGDS
                     QMSTVPGLFACGECAAGLHGANRLGGNSLSDLLVFGKRAGEYAARYAKDQPSVKIDEG
                     AVKDAADRALAPFARSGGAEGPYQVQDALQTAMQNHVGIVRTQHEMERALGELEALKQ
                     RAERVAVPGNREFNPGWHTALDLRHLLIVSEAITRSALARKESRGGHFRDDYPDKDPA
                     YATFNFVTRAGPDGAMRVEREPIPELPAELAAIIKEMQS"
     gene            complement(3787..4530)
                     /locus_tag="VFN38_09790"
     CDS             complement(3787..4530)
                     /locus_tag="VFN38_09790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012093.1"
                     /translation="MRRDAWWLPPLGAFVVLSSFLAYATWAAFQNGHYEFGPYLSPFY
                     SPLLFGDSPHAWFRSAPTWLPAVSPALLILPFPAGFRFTCYYYRGTYYKAFWADPPGC
                     AVGEPRQTYRGERKLPLVIQNVHRYFLYFAIAFLFILASDAWKGLWFANAAGVKHFGV
                     GVGSLVLIVNVSLLTGYTLGCHSLRHLVGGYLDQLAGRPARRTAYDCVSCLNRGHMNW
                     AWASLFWVAFTDIYVRLCAMGVWRDWRIL"
     gene            4720..>5745
                     /locus_tag="VFN38_09795"
     CDS             4720..>5745
                     /locus_tag="VFN38_09795"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HET9012094.1"
                     /translation="MTRAPTPGLTAALAERYAIERELGHGGMATVYLARELKHARQVA
                     IKVLHAELAASMGAERFLREIGIVAQLSHPHIVPLIDSGDADGLLYYVSPFVTGGSLR
                     DRLRLEQRLPVRDALRVAREVGSALDYAHRNGFVHRDVKPENILFADGQAVLADFGVA
                     RAYGARDAGSDVDAVTEAGFALGTPAYMSPEQASGDRELGAPTDVYSLACVVYEMLAG
                     TPPLVGASARTTIAKQVMETPRPIRALRPEVPIGAEQALARALSKAPEDRPASAIEFV
                     EALSSDAHDRAHAYPTLTRTIAVLPFVNASPDPENEYLSDGITDELIDALAKVEGLRV
                     ASRTSVFA"
BASE COUNT          866 a         1929 c         2040 g          910 t
ORIGIN      
        1 cgccgcgcgt caggtcgccc atcttcgtcc gccagaggag cttccccgtc gcggcgtcga
       61 tcgcgacggc gtgcccgtcg agcaggttgt agaagatctt cccgtcggcg tacgcggcgc
      121 cgcgattgac gacgtcgcag caggcgaggc cgaccgccgt ctgcgcgttc ggcggacgcg
      181 ccttccactt gagcggctgc ccttcctgcg tcaggtccag cgcgtacgac acgttcggat
      241 agggcgtgac gacgtacatc gtgttctgca cgacgagggg cgagccctcg tggccgcgca
      301 gcacgccggt ggagaaggtc cacgcggcgt ggaggttctt cgcgttggcg gccgtgatct
      361 gatcgagctc gctgaagcgc gagttggcgt agtcgccggc gggaagcgac cactcgccag
      421 ccgggcccgg gcgcgacgtg gcgatacgcg tgccggcgac ggtcgtgccg gcgcccgtcg
      481 tacgctgggc ttcgtcgccc cgcgtgcacg ccgcagcgag agcgagcagc agcaggacgc
      541 gcagacgtct actcaccgaa acttggctca tactgtccct ccgccggctc ggccaatcgc
      601 aggcgctgga tggtccgaag acaggtgttc cagcgcagga tggcatcgtc gttgcccggc
      661 tggcgcagcc gctcggcctt ctcgaacgaa tccatggcat ccttgagcga ctcccaggcc
      721 atcgcctcgg cgtgcatgat cccctgcgcg aggtgggcgt ggccgaggcg ttcgtcgatg
      781 atgccggcgt aatacgcctt ctgatatgga tcggtgatgc ggccgagcac ctcgcgcgca
      841 cgactcgcca gctcgcgtga ctgggcgccg aactggtcgg tgatggcgag cagcagcatc
      901 acgaggaccg gctggttcgt ggggtccacc tcgaggatgt cgaggcagat gctctcggtg
      961 gcccacgact ggttgagcag ccgatagcgc tccgccttct gcacggcgcg cgggatggcc
     1021 tcgttcgaga ttcgcttcag gtccggcatg gctctctcca gtggctggac accgccatcg
     1081 cttggaaacc agatcccgac actcgcttcg ctcgtgcagg atgacgagaa tgctcaaccg
     1141 ctctttctcg gtccgcggac gagacgcacc agcgccgcga gcggatcgta gtgacggtcc
     1201 accacgcgct ccttgagcgg gatgatggcg ttgtcggtga tcgtgatgtg ctccgggcac
     1261 accttggtgc agcacttggt gatgttgcag tagccgatgc cgaactgctc cttcagctcc
     1321 gtcgtgcggt cggcggtgtc gagcgggtgc atctccaagg cggccgcgta cacgaggaag
     1381 cggggtccca cgaactcgtc gtgcatgtgg tgatcccgca gcacgtggca gacgtcctgg
     1441 cagaggaagc actcgatgca cttccggaac tcctggacgc gctccacgtc ccgctgggcg
     1501 atccgccacg tgccgtcggg cgcgtcgggc gcgcgaggcg tgaacggctg gatgcgcggc
     1561 ttgacgcgga agttccacga cacgtcggtc acgaggtcgc gcacgtgcgg aaaggcgcgc
     1621 atcggctcca cggtcaccgg ctcgtcgagc ggcaggtcgt cgagcctcgt catgcacatg
     1681 agcttcggct ttccgttgat ctcggccgag caggagccgc acttgcccgc cttgcagttc
     1741 caccgcacgg cgaggtcgtt ggcctgctcc gcctggatct gctggacggc gtcgagcacc
     1801 accatccctt cgttcacttc ggtggtgtag tcggcgaacg cgccggaccc gtcggcgccg
     1861 cgccagaggc ggaagctacg cgcgccatgg ccgacggcgg cgtcctgcgc ggcctgggca
     1921 gcggtgtagg catcgacggc gcccgtggtg ggcggagcgg ttgggacggt cacgactgca
     1981 tctccttgat gatcgccgcc agttcggcgg ggagctcggg gatcggctca cgttccacgc
     2041 gcatcgcgcc gtcgggcccg gcacgcgtca cgaagttgaa cgtggcgtac gccggatcct
     2101 tgtcagggta atcgtcgcgg aagtgccccc cgcggctctc cttgcgggcc agcgccgacc
     2161 gggtgatggc ctccgacacg atgagcaggt gtcgcagatc cagggcggtg tgccatccgg
     2221 gattgaactc ccgattgccg ggtaccgcca cgcgttcggc gcgctgcttc agcgcctcga
     2281 gctcgccgag ggcgcgctcc atctcgtgct gggtgcgcac gatgccgacg tggttctgca
     2341 tcgccgtctg cagggcgtcc tgcacctgat acggtccctc ggctccgccc gagcgcgcga
     2401 agggggcgag cgcgcgatcg gcggcgtcct tcaccgcgcc ttcgtcgatc ttcacggagg
     2461 gctggtcctt ggcgtaccgc gccgcgtatt cgccggcccg cttgccgaac acgagcaggt
     2521 ccgagagcga gttgccgccg agtcggttcg cgccgtgcag gccggcggcg cactcgccgc
     2581 aggcgaagag gccgggcacg gtggacatct ggctgtcgcc gtcgacgcgg atgccgccca
     2641 tgatgtaatg cgtcgtgggg ccgatctcca tcgcttcctt cgtgatgtcg atgccggcga
     2701 gctgcatgaa ctgatgatac atgctcggca gcttcttgcg gatgtgctcg gccgcgttgg
     2761 ggagccggtc cttgagccag gagatgtcga ggtagacgcc gccgtgcggc gagccgcgcc
     2821 cttccttcac ctcgcggacg atcatgcgcg ccacgtgatc gcgcgtcagc agctcgggcg
     2881 ggcgacgcgc atccttgtcg ccctgcgtgt agcgccaccc ctcttcctcg ttgtccgccg
     2941 tctgcggctt gtagttgtcg gggatgttct cgaacatgaa ccgcttgccc tcgcggttcc
     3001 gcagcactcc tccttcgccg cgcacccctt ccgtgacgag gatgccgcgc acgctcggcg
     3061 gccagatcat ccccgtggga tggaactgca cgaactccat gtcctggagc gccgcgcccg
     3121 cgaggtacgc cagcgcatgg ccgtcgccgg tgtactccca gctgttgctc gtgatgctgt
     3181 acgcgcgccc cacgccgccc gtggcgagga tgacggactt ggcgcgaaag aggcggaagc
     3241 ggccgcgctc gcggtcatag gcgaacgcgc cggcgatgcg ctcgccgtcc ctgaggagcg
     3301 tgagcaccgt gcactccatg tgcacgtcca tccccttgtg gatcccgtga tcctggaggg
     3361 tacggatcat ctcgagcccc gtgcgatcgc cgacgtgcgc gagccggggg tagcgatgcc
     3421 cgccgaagtt gcgctggagg atgcgaccgt cggtggtgcg atcgaacagc gcgccccacg
     3481 cctccagctc gttgacgcgc gccggcgcct cacgcgcgtg cagctcggcc atccgccagt
     3541 tgttgacgta ctgaccgccg cgcatcgtgt cggcgaagtg cacgcgccag ctgtcgcggt
     3601 cgtccacgtt cgcgagcgcg gccgcgacgc caccttcggc catgaccgtg tgcgccttgc
     3661 cgagcagcga cttgcagacc acgccgaccg agagcccgct ggccgcggcc tcgatcgcgg
     3721 cgcgcaggcc cgcgccgccg gcgccgatga cgagcacgtc gtggtcgacc gcctggtgct
     3781 cgagcatcag agtatccgcc agtcgcgcca cacgcccatg gcgcagaggc gaacgtagat
     3841 gtcggtgaac gccacccaga acaggctggc ccacgcccag ttcatgtggc cgcgattgag
     3901 gcagctcacg cagtcatagg cggtgcgccg tgccggacgg ccggcgagct ggtcgaggta
     3961 gccgcccacg agatggcgca gcgagtgaca gccgagggtg tagccggtga gcagcgagac
     4021 gttgacgatg agcacgagcg atcccacgcc gacgccgaag tgcttcacgc cggcggcgtt
     4081 cgcgaaccac agtcccttcc atgcatcgct cgccaggatg aagaggaagg cgatggcgaa
     4141 gtacaggaag tagcggtgca cgttctggat cacgagcgga agcttgcgct cgccacgata
     4201 cgtctggcgc ggctcgccga ccgcgcaccc cggcggatcg gcccagaatg ccttgtagta
     4261 ggtgccgcga tagtaatagc aggtgaagcg gaagccggcg ggaaagggga ggatcagcag
     4321 cgcgggcgag acggcgggca accacgtcgg cgccgaccgg aaccaggcgt gcggcgaatc
     4381 gccgaagagg agcggcgagt agaagggcga caggtacgga ccgaactcgt aatgtccgtt
     4441 ctggaacgcc gcccaggtgg cgtacgccag gaacgagctc aggaccacga acgcgccaag
     4501 cggcggaagc caccaggcgt cgcggcgcat ggtttcaccg aaccggcgac gcgtgagctg
     4561 aacgaccgct tgagccatcg agcccgcctc tccagggaga aagtcgggct aaggtagagg
     4621 cggtgaaatg aggggggaag aggtcgcggg ccgcgctgcc cgacgcggcg gcggcacgcc
     4681 cgaatggctc tccgcgcggc gtggcgccat acttccgtcg tgacgcgcgc accaaccccc
     4741 ggcctcaccg ccgcgctcgc cgagcggtac gcgatcgaac gcgagctcgg ccacggcggc
     4801 atggcgacgg tctatctggc gcgggagctc aagcacgcgc ggcaggtggc gatcaaggtg
     4861 ctgcatgccg agctggccgc ctcgatgggc gccgagcgct tcctgcgcga gatcggcatc
     4921 gtggcgcagc tcagccatcc ccacatcgtg ccgctcatcg attcgggcga tgccgacggc
     4981 ctgctctact acgtgtcccc gttcgtgacc ggggggtcgc tgcgcgaccg cctgcggctg
     5041 gagcagcggc ttccggtgcg cgatgccctg cgcgtcgcgc gcgaggtggg cagcgcgctg
     5101 gactatgcgc atcgcaacgg cttcgtgcat cgcgacgtga agccggagaa catcctgttc
     5161 gccgacggcc aggccgtgct ggcggacttc ggtgtcgcgc gcgcgtacgg tgcccgcgac
     5221 gccggttccg acgtggatgc cgtgacggag gccggattcg cgttgggcac gccggcgtac
     5281 atgagccccg agcaggcgag cggcgaccgg gagctcggcg cgccgaccga cgtctacagc
     5341 ctggcgtgcg tcgtgtacga gatgctggcc ggcacaccgc cgctcgtggg ggcgagcgcc
     5401 cgcacgacga tcgccaagca ggtgatggag acgccgcgcc ccattcgcgc cctgcggccg
     5461 gaggtgccga tcggcgccga gcaggcgctg gcgcgcgccc tgtccaaggc gccggaggac
     5521 cggccggcga gcgcgatcga gttcgtggag gcgttgtcca gcgacgcgca cgaccgagcg
     5581 cacgcctacc ccacgctgac gcgcacgatc gccgtgctgc cgttcgtcaa cgcgagcccg
     5641 gacccggaga acgaatacct gagcgacggc atcacggacg agctgatcga cgcgctggcg
     5701 aaggtggagg ggttgcgggt ggcgtctcgt acgtccgtgt tcgcc
//
LOCUS       DASSYW010000612         2287 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1563796, whole genome shotgun sequence.
ACCESSION   DASSYW010000612 DASSYW010000000
VERSION     DASSYW010000612.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2287)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2287)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2287
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1563796"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1886)
                     /locus_tag="VFN38_09800"
     CDS             complement(<1..1886)
                     /locus_tag="VFN38_09800"
                     /inference="COORDINATES: protein motif:HMM:NF024376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhnD/SsuA/transferrin family substrate-binding
                     protein"
                     /protein_id="HET9012095.1"
                     /translation="MAAVASICLLPAVAAAQERPLRVGNVTAQFGTTPRNFTPLTDYL
                     STYLDGRRVQVVQFDSIEQMVEIVDAGGVDFIVASPVALVTLTARHRVRPIATVTQIA
                     GGRVAPYLAGAVFVKNGRDDLLRMEDARGQRVLALSRLALGGWLAPIREWHRRGLEET
                     DFGRLDFDFNYQQVASKVCAGEADIGVLPANRLEELKDSCPGGLRLLGSPQGRDGRYP
                     IPVSTPLYPEAAVAAVAEMDEDVVTRVAVALLAVDAGSPAASAIGVSGFTAPLSYAPV
                     QQLMEELRIGPYESFGRLTFTEALRQHAGKVLIAMLGFLSVLSFAFVRSRRLNARLER
                     SMAQQLVAEHERVRLESQLQQSRRLESIGRVAGGVAHDFNNLLTVINGYSQILLMGPL
                     ASDTRDEVEQINKAGRRAAELTNQLLTFSRRQVTEVVPLDLNSVIHDAEPLLRRLAGE
                     DVQLVVTPSPQLARFEGDVSQTNQVLMNLVVNARDAMPGGGRIDIATENQSVRGMDGH
                     PRELTPGEYVVLSVADTGIGMNAETRQQIFEPFFSTKGEAGTGLGLSTVYGIVRQRQG
                     AIDVWSEPGQGTRFRIYLPQAKQVAEAKAPAAAPATASPAPAGARRILVVEDQDDVRG
                     FATEV"
     gene            complement(1946..>2287)
                     /locus_tag="VFN38_09805"
     CDS             complement(1946..>2287)
                     /locus_tag="VFN38_09805"
                     /inference="COORDINATES: protein motif:HMM:NF019157.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tannase/feruloyl esterase family alpha/beta
                     hydrolase"
                     /protein_id="HET9012096.1"
                     /translation="WGDTTITPENTVLYYENVLGKMGRNQGDFVRLFMVPGMAHCRGG
                     DGPNTFDTIGTMEAWREKNVIPTQMMGFNPQSSLSRPICSYPQAPKYKGSGNIKDASN
                     WSCAAPQTSTR"
BASE COUNT          341 a          779 c          800 g          367 t
ORIGIN      
        1 acctcggtgg cgaacccgcg cacgtcgtcc tgatcctcca ccacgaggat gcgcctcgcg
       61 ccggccggcg ccgggctcgc cgtcgcgggc gccgccgcgg gagccttggc ctcggcgacc
      121 tgtttcgcct gcggcaggta gatgcggaag cgcgtgccct ggccgggttc gctccacacg
      181 tcgatggccc cctgccgctg gcgcacgata ccgtagacgg tggacagccc caggccggtg
      241 cccgcttcgc ctttggtgga gaagaacggt tcgaagatct gctgccgcgt ctcggcattc
      301 atgccgatgc cggtgtcggc cacgctcagc accacgtact cgcccggcgt gagctcgcgc
      361 gggtggccgt ccatcccgcg cacactctgg ttctccgtgg cgatgtcgat gcggccgccg
      421 cccggcatgg cgtcgcgcgc gttgaccacg aggttcatca gcacctggtt cgtctggctg
      481 acgtcccctt cgaagcgggc gagttgcggc gacggcgtga ccacgagctg aacgtcctcg
      541 ccggccagcc gccgcaacag cggttcggcg tcgtggatca cgctgttcag atcgagcggc
      601 acgacctcgg tgacctgccg gcggctgaac gtgagcagct ggttggtgag ctcggcggcg
      661 cggcggcccg ccttgttgat ctgctcgacc tcatcacgtg tgtctgacgc gagtggtccc
      721 atcagcagga tctggctgta gccgttgatg accgtgagca ggttgttgaa gtcgtgcgcc
      781 acgccgccgg ccacgcggcc gatcgactcg aggcggcgcg actgctgcag ctgcgactcg
      841 agacgcacgc gctcgtgctc ggcgacgagc tgctgggcca tcgaccgctc cagccgcgcg
      901 ttgagccggc gcgagcgcac gaaggcgaac gagagcaccg acaggaagcc gagcatggca
      961 atcagcacct ttcccgcgtg ctgccgcagc gcttcggtga aggtgaggcg gccgaacgac
     1021 tcgtaggggc cgatgcgcag ctcctccatc agctgctgca ccggcgcgta gctcagaggc
     1081 gcggtgaagc cagacacacc gatggcactc gcggccgggc tcccggcgtc gacggcgagg
     1141 agcgcgacgg ccacgcgggt gacgacgtcc tcgtccatct cggcgacggc cgcaacagcc
     1201 gcttcggggt agagcggcgt gctcacggga atcgggtagc gcccgtcgcg cccctgcggg
     1261 ctgccgagca accgcaagcc gccggggcag gagtccttga gctcctcgag ccgattggcg
     1321 gggagcacgc cgatgtcagc ctcgccggcg cacaccttgc tggccacctg ctggtagttg
     1381 aagtcgaagt ccagccggcc gaagtcggtc tcttcgagtc cgcgccggtg ccactcgcgg
     1441 atgggcgcca gccacccgcc gagcgccagc cgcgacagcg cgagcactcg ctggccgcgt
     1501 gcatcttcca ttcggagcag atcgtcgcgg ccgttcttca cgaacacggc gcccgcaagg
     1561 tagggggcca cgcgcccgcc ggcgatctgc gtcaccgtgg cgatgggacg cacgcggtgg
     1621 cgagcggtca gggtgacgag cgcgacgggc gaggcgacga tgaaatccac tccgccggca
     1681 tcgacgattt ccaccatctg ctcgatgctg tcgaactgca cgacctggac gcgacggccg
     1741 tcgagatacg tcgagagata gtcggtgagc ggcgtgaagt tacgcggggt cgtgccgaat
     1801 tgcgcggtga cgttgccgac gcgaagcgga cgctcctgcg ccgccgcgac ggcgggcagg
     1861 aggcagatcg aggcaacggc cgccacgcac cgcagcacca tccgtgccca gtctacgctg
     1921 taactcagcc gtccgggtgg cctcgtcagc gcgtggacgt ctgcggcgca gcgcaggacc
     1981 agttcgacgc gtccttgatg ttgcccgacc ccttgtattt cggcgcctgc ggataggagc
     2041 agatcggccg cgagaggctc gattgcgggt tgaatcccat catctgcgtg gggatcacat
     2101 tcttttcgcg ccaggcttcc atcgtgccga tggtgtcgaa ggtgttcggg ccgtcgccgc
     2161 cgcggcagtg cgccatgccg ggcaccatga agagccgcac gaagtcgccc tggttgcgcc
     2221 ccatcttgcc gagcacgttc tcgtagtaga gcaccgtgtt ctcgggcgtg atggtggtgt
     2281 cgcccca
//
LOCUS       DASSYW010000613         3162 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_242473, whole genome shotgun sequence.
ACCESSION   DASSYW010000613 DASSYW010000000
VERSION     DASSYW010000613.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3162)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3162)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3162
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_242473"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            125..2002
                     /locus_tag="VFN38_09810"
     CDS             125..2002
                     /locus_tag="VFN38_09810"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HET9012097.1"
                     /translation="MSDDAPSFVRGIFAGAIHDDLLLPFPASLEARDPDEARTVRRLL
                     ADLERLRDSGLIDPARFDEEETVPEATIRALAEGGWMGLSIPREYGGLGLSAAAYAHV
                     FGAISSTDASIAVLLGVHCGLGSKAIVLFGTPAQKARYLPMLARGETLAAYALTEPET
                     GSDAQNIVTQAQPNADGSWTLTGRKQWIGNGHRAGVIATFAQAPVQRGGKTVLRPTAF
                     IIRPDMPGFRVAGTVRKLGIRGSTQAELVYDNLQVPADHVLGTVGKGFGVAVKVLNGG
                     RLTLAAGCTAGTKSLLAQMVGFAETRVQFGRPIADFEITQRKLARTASDLYAADAMLG
                     ELTRLAEHPDGEYALEAACCKVFASEMLWRAADEMVQVAGGRGYVKPYPYERQLRDAR
                     INRIFEGTNEILRLFIALNGIQGPAAQLKELGIALRRPLRNLGLISGFAASRLASRLG
                     ATPTLDVELHERLQPHARHFEKHVAEMKDAAERAIRAHRAEIVERQQELERLSDMAIE
                     LFATACVLARTQALLLARGVDGCARELELCDLFIVEAGRRFRSVRLTIQSAQDETRRA
                     VAKQVRDAAGYGVEDALLPEERHEDAVARRSGGSTSSPGRTPSTPAAVPPSRLTATPK
                     G"
     gene            1999..2631
                     /locus_tag="VFN38_09815"
     CDS             1999..2631
                     /locus_tag="VFN38_09815"
                     /inference="COORDINATES: protein motif:HMM:NF016115.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004061 - arylformamidase activity
                     [Evidence IEA];
                     GO_process: GO:0019441 - tryptophan catabolic process to
                     kynurenine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HET9012098.1"
                     /translation="MIYDISVPLRSGGVVYPGNPAIEITAQQAIARGAGANVSRIDFG
                     SHSGTHVDAPKHFFDDGAGADTLSLDVLMGPARLIAFDDSVKSVGEAELRAHDLQGVT
                     RLLVRTRNSAWLTSGTTEFHPDFTFVAPDGAAYLVSLGVKLVGVDYLSVEQFHSGHHR
                     THRTLLGANVVIVEGLMLTEPPPGDYELRCLPLRLTGLDGAPARAVLIAR"
     gene            complement(2648..>3162)
                     /locus_tag="VFN38_09820"
     CDS             complement(2648..>3162)
                     /locus_tag="VFN38_09820"
                     /inference="COORDINATES: protein motif:HMM:NF024091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HET9012099.1"
                     /translation="EKELGTIEQLNVTPITKAEFITAKLLPFWVLALLDLALGLFVGR
                     LVFGVPVRGSLALLFASAGIYLVVALAIGLWISTMVDTQQQAMFVTFFVLMIYLLMGG
                     LFTPIDSMPRWVQLLSELNPIRHFAAIIRGLLLKDARLAEIARPLGVLSLYAVAILAL
                     AIRRYQKRTA"
BASE COUNT          473 a         1113 c         1143 g          433 t
ORIGIN      
        1 tagagtggct catgccgaaa gctcccccgc gtgccgggcg cacgcaacgc cctgcatcac
       61 accgcgtgct agtgccgagt ccgccgtgct ggtgtcgctc ccctctcccg tctatgcttc
      121 cgcgatgagc gacgacgccc cctccttcgt gcgaggcatc ttcgccggcg cgatccacga
      181 cgacctcctc ttaccatttc ccgcctccct ggaggcgcgc gatccggacg aggcgcgcac
      241 ggtgcggcgg ctgctggcag atctcgagcg gctgcgggac agcggcctca tcgaccccgc
      301 ccgcttcgac gaggaggaaa cggtcccgga ggcgaccatc cgcgccctcg ccgagggggg
      361 gtggatgggg ctgtccatcc cgcgcgaata cggcgggctg ggattgtctg ccgccgccta
      421 cgcgcacgtc ttcggcgcca tctccagcac cgacgcgtcc atcgccgtgc tcctcggcgt
      481 gcactgcggg ctcggctcca aggcgatcgt gctgttcggc actccggcgc agaaggcgcg
      541 ctacctcccg atgctggcgc gcggcgagac gctcgcggcg tacgcgctca ccgagccgga
      601 gaccggctcg gacgcgcaga acatcgtgac ccaggcccag cccaacgccg acgggagctg
      661 gacgctcacg gggcgcaagc agtggatcgg gaacggccat cgcgccgggg tgatcgccac
      721 gttcgcgcag gccccggtgc agcgcggcgg caagacggtg ctgcggccga cggccttcat
      781 catccgcccc gacatgccgg ggttccgcgt ggcgggcacg gtgcgcaagc tcggcatccg
      841 cggctccacg caggcggagc tggtctacga caacctgcag gtgccggccg accacgtgct
      901 cggcacggtg ggcaaggggt tcggcgtcgc cgtgaaggtg ctgaacggcg gccggctcac
      961 cctcgccgcc ggctgcaccg ccggcaccaa gtccctgctc gcgcagatgg tgggcttcgc
     1021 cgagacgcgg gtgcagttcg gtcgcccgat cgccgacttc gagatcacgc agcgcaagct
     1081 cgcgcgtacg gcgagcgacc tctacgccgc cgacgcgatg ctcggcgagc tgacgcggct
     1141 ggccgagcat cccgacggcg agtacgcgct ggaggccgcg tgctgcaagg tgttcgcgag
     1201 cgagatgctc tggcgcgcgg ccgacgagat ggtgcaggtg gcggggggcc gcggctacgt
     1261 gaagccgtac ccgtacgagc ggcagctgcg cgacgcgcgg atcaaccgga tcttcgaggg
     1321 gacgaacgag atcctgcggc tgttcatcgc gctcaacggg atccaggggc cggcggccca
     1381 gctcaaggag ctcggcatcg cgctgcggcg cccgctgcgg aacctcggcc tgatctccgg
     1441 cttcgcggcc tcgcggctcg cgagccgcct gggcgcgacg cccacgctgg acgtggagct
     1501 gcacgagcgg ctccagccgc acgcgcgcca cttcgagaag cacgtcgccg agatgaagga
     1561 cgccgccgag cgggcgatcc gcgcccatcg cgccgagatc gtcgagcgcc agcaggagct
     1621 cgagcggttg agcgacatgg cgatcgagct gttcgccacc gcgtgcgtgc tcgcgcgcac
     1681 ccaggcgctc ctcctcgccc ggggcgtgga cggctgcgcg cgcgagctgg agctgtgcga
     1741 cctgttcatc gtggaagcgg gccgccggtt ccgctccgtc cggctcacca tccagagcgc
     1801 gcaggacgag acccggcgtg ccgtggcgaa gcaggtgcgc gacgcggccg gctacggcgt
     1861 ggaggatgca ctcctgccgg aggagcggca cgaagatgcg gtggcgagac ggtcgggcgg
     1921 ttcgacgtcc tcgccaggcc ggacgccgtc gacgcccgcc gccgtacccc cgagccgcct
     1981 caccgccacg ccgaaaggat gatctacgac atctccgtcc cgctccgctc cggcggcgtc
     2041 gtctacccgg gcaacccggc catcgagatc acggcgcagc aggcgatcgc ccgtggtgcc
     2101 ggggccaacg tgtcgcgcat cgacttcggc tcccactcgg gaacgcacgt cgacgcgccg
     2161 aagcacttct tcgacgacgg cgccggggcg gacaccctct ccctcgacgt gctgatgggg
     2221 ccggcgcggc tcatcgcgtt cgacgattcg gtgaagagcg tcggcgaggc cgagctgcgc
     2281 gcgcacgacc tgcagggcgt gacgcggctc ctcgtgcgga cgcgcaactc ggcgtggctc
     2341 acgagcggaa cgacggagtt ccatcctgac ttcaccttcg tcgctcccga cggcgcggcg
     2401 tacctggtga gcctgggcgt caagctggtt ggcgtggact acctgtccgt ggagcagttc
     2461 cactcggggc atcaccgcac gcatcgcacc ctgctcggcg cgaacgtggt gatcgtggag
     2521 ggactgatgc tcaccgagcc gccgccgggc gactacgagc ttcgctgcct gccgctgcgg
     2581 ctgacggggc tggacggcgc gcccgcgcgc gcggtgctga tcgccaggta ggcgcggcgg
     2641 agcggcgtca cgccgtgcgc ttctggtagc gccggatcgc gagcgcgagg atcgccacgg
     2701 catacagcga cagcacgccg agcggccgcg cgatctcggc gaggcgggcg tccttcagga
     2761 ggaggccgcg gatgatcgcc gcgaagtgcc ggatgggatt gagctccgac aggagctgca
     2821 cccaccgcgg catgctgtcg atgggggtga agagcccgcc catcagcagg tagatcatca
     2881 gcacgaagaa ggtgacgaac atcgcctgct gctgggtgtc caccatcgtg gagatccaga
     2941 gcccgatggc gagggcgacc accaggtaga tcccggccga ggcgaagagg agggcgaggc
     3001 tcccgcggac cggcacgccg aacacgaggc ggccgacgaa caggccgagc gcgaggtcga
     3061 gcagggcgag cacccagaag gggagcagct tggcggtgat gaactccgcc ttcgtgatcg
     3121 gcgtgacgtt gagctgctcg atggtcccca gctccttctc gc
//
LOCUS       DASSYW010000614         2559 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1681898, whole genome shotgun sequence.
ACCESSION   DASSYW010000614 DASSYW010000000
VERSION     DASSYW010000614.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2559)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2559)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2559
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1681898"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1013)
                     /locus_tag="VFN38_09825"
     CDS             complement(<1..1013)
                     /locus_tag="VFN38_09825"
                     /inference="COORDINATES: protein motif:HMM:NF012602.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HET9012100.1"
                     /translation="MSNDTGSTGVKRRDFLKVLGVGTAAASTVGCSSEKVGKLIPYLV
                     HPDETVAGVSTYYASTCRECAAGCGIIAETRDGRTTKLEGNPEHPLNRGALCARGQSA
                     LQGLYNPDRLRGPMVKENGAWKAIAWDAALTLVSQKLGEARSRGGAANGVFLNQHETG
                     SFPGFLDAWLGGFGMRPHLSVDFEADSAAIEANRRAYGVAWPKLSFADAKLIVSFGAD
                     FLETWGMSVPQQLDFADARAKGAAAPRFVYIGPRRSLTGLNADQWIACKPGTELAIAN
                     ALRGSGSTADAARESGVAEATLVRLQQELASAKPALVLSGARGANALELAVAVGALNQ
                     AGGA"
     gene            complement(1036..1782)
                     /locus_tag="VFN38_09830"
     CDS             complement(1036..1782)
                     /locus_tag="VFN38_09830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c3 family protein"
                     /protein_id="HET9012101.1"
                     /translation="MTQRRKWTAIPGLLALGIGAVVLSAYSGASSSQGRGPTQPIAFP
                     HPRHAGAVKDGGLAMNCLYCHNTANKSLDVGMPAVNTCMGCHNAVTGTTPQAKTEIAK
                     LVKYAAEQKPVPWERIHKVPDYVHFPHVRHVNAGVTCQTCHGQVQKMTQVYQYASLNM
                     GWCVNCHVNGYDPKEGQKAAGYDSVPPANYAGGAPYGTPGTRAGIATTGAGLTPPGMG
                     LPRDSAAPAPTATPSAERRRARYDCASCHY"
     gene            complement(2072..>2559)
                     /locus_tag="VFN38_09835"
     CDS             complement(2072..>2559)
                     /locus_tag="VFN38_09835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012102.1"
                     /translation="YPIQWGMAPDDPRLRALALACGERRVPLLLTVRFEDLRQRHPLD
                     VAGDLTAAHVRALARAGDVRLVVTGAGRELLEETHWGLTPDEQRRVHWDFAWIWGPPE
                     DHLAHLFRTVGAERFVYGTHWPLRLTQNSRANLDLLPPDLHARGIADAEALAPIRKTP
                     T"
BASE COUNT          368 a          864 c          939 g          388 t
ORIGIN      
        1 gcgccaccgg cctggttcag cgcgcctacc gcgaccgcga gctcgagcgc gttggcgccg
       61 cgcgcgccgg agaggaccag cgccggcttg gcggaggcca gctcctgctg caggcggacg
      121 agggtggcct cggcgacgcc gctctcccgc gcggcgtcgg cggtggaccc gctgccgcgc
      181 agcgcgttgg cgatcgccag ctcggtgccc ggcttgcagg cgatccactg atccgcgttg
      241 agccccgtga gggagcggcg ggggccgatg tacacgaagc gcggcgcggc cgcgcccttg
      301 gcgcgcgcgt cggcgaagtc gagctgctgg ggcaccgaca tgccccacgt ctccaggaag
      361 tcggcgccga acgacacgat gagcttcgcg tcggcgaagg agagcttcgg ccacgcgacg
      421 ccgtacgcgc gccggttcgc ctcgatcgcg gcgctgtcgg cctcgaagtc cacgctgagg
      481 tgcgggcgca tgccgaagcc gccgagccag gcatcgagga agccggggaa gctccccgtc
      541 tcgtgctggt tgaggaagac cccgttcgcc gcgccgccgc ggctgcgcgc ctcgccgagc
      601 ttctggctca cgagggtgag ggcggcgtcc cacgcgatcg ccttccacgc gccgttctcc
      661 ttcaccatcg gtccgcgcag ccggtcgggg ttgtagagcc cctgcagcgc cgactgcccg
      721 cgggcgcaga gcgcgccgcg gttgagcgga tgctcggggt tcccctcgag cttcgtcgtg
      781 cggccgtcgc gcgtctcggc gatgatgccg cagcccgccg cgcactcgcg gcaggtggac
      841 gcgtaatagg tggacacgcc ggccaccgtc tcgtcgggat gcacgagata ggggatcagc
      901 ttgccgacct tctcggagct gcagcccacc gtgctcgcgg cggcggtgcc gactccgagc
      961 accttgagga agtcgcggcg cttgacgccc gtcgaccccg tgtcgttgct catgtgctga
     1021 ggttcctcgg acgggctagt agtgacagga cgcgcagtcg tatcgcgcgc ggcggcgctc
     1081 tgcggacgga gtcgcggtgg gcgccggggc cgcgctgtca cgcgggagcc ccatgccggg
     1141 cggggtcagg ccggcgcccg tggtggcgat gccggcgcgc gtgccggggg tgccgtaggg
     1201 cgcaccgccg gcgtagttgg cgggcggcac gctgtcgtag cccgcggcct tctgcccctc
     1261 cttggggtcg tagccgttca cgtgacagtt gacgcaccag cccatgttga gcgaggcgta
     1321 ctggtacacc tgggtcatct tctgcacctg cccgtggcag gtctggcagg tgacgccggc
     1381 gttcacgtga cggacgtgcg ggaagtgcac gtagtccggc accttgtgaa tgcgctccca
     1441 cggcaccggc ttctgctcgg ccgcgtactt caccagcttg gcgatctcgg tcttcgcctg
     1501 cggggtggtg ccggtgacgg cgttgtggca acccatgcag gtgttcaccg ccggcatgcc
     1561 gacgtcgagc gacttgttcg ccgtgttgtg gcagtagagg cagttcatcg cgagcccgcc
     1621 gtccttcacg gcgccggcgt ggcgcggatg cggaaaggcg atcggctggg tggggccgcg
     1681 gccctgcgaa gaggaggcac cactgtaggc ggacagcacg acggcaccga tgccgagggc
     1741 gaggagcccg gggatcgcgg tccacttcct tcgctgcgtc atcgcgatgg ggtgtaggaa
     1801 aatcggagga gggggggctt gtgaatcaat tcacaagtcc ccgaccggcc agcaagttgc
     1861 tcgcgtgccg agctcgccgc aagacgacga cgagcacgaa gcgcgcatga tatccacatg
     1921 tccgcgagga tgctatcggc aggtgagcat caccgctgaa gtcccgcact cattttgtcc
     1981 atgagccgat cgggcggaag cgatcctgcg tgcaccagat gtaaaatggg cccggttcgg
     2041 caacggaacc tctccggacc cgccatcacg gtcaagtcgg cgttttcctg atcggcgcga
     2101 gagcctctgc atccgcgatg ccgcgcgcgt gaagatcggg cggtaacagg tcgagattgg
     2161 cgcgggaatt ctgcgtcagc cgcagcggcc agtgagtgcc gtagacgaag cgctccgcgc
     2221 ccaccgtgcg aaacagatgg gcgagatgat cctcgggagg cccccagatc caggcgaagt
     2281 cccagtgcac ccggcgctgc tcgtcggggg tgagccccca gtgcgtctcc tcgagcaact
     2341 cgcggccggc accagtgacg acgagacgaa cgtcacccgc gcgcgccagc gcgcgcacgt
     2401 gcgccgcggt gaggtcgccg gcgacgtcga gcggatgccg ctgccgaaga tcctcgaacc
     2461 gcaccgtgag caggagcggc acccgccgct cgccgcaggc gagcgcgagc gcccgcagcc
     2521 gcggatcgtc gggcgccatc ccccattgta tcgggtagg
//
LOCUS       DASSYW010000615         2043 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_314831, whole genome shotgun sequence.
ACCESSION   DASSYW010000615 DASSYW010000000
VERSION     DASSYW010000615.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2043)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2043)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2043
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_314831"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..195)
                     /locus_tag="VFN38_09840"
     CDS             complement(<1..195)
                     /locus_tag="VFN38_09840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012103.1"
                     /translation="MPFQRRLCLPFACATLIVASVRLLPAQNAPRLVPVHVAVTTANG
                     TLVTDLSKDEIEVRVDGQVRA"
     gene            complement(195..1073)
                     /locus_tag="VFN38_09845"
     CDS             complement(195..1073)
                     /locus_tag="VFN38_09845"
                     /inference="COORDINATES: protein motif:HMM:TIGR03436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HET9012104.1"
                     /translation="MRAAVALCLAAGIGIGLTARQATFKSSTQTVVVYATVRDAAGRL
                     VPDLTQDDFALLDDGAPVRIATFSNDIQPITVALLLDMSGSMLSRLVRVRDSTLRFID
                     ALRPADRVRIGTFGDEIGISPVLTGDKAVLTRIVREELWPGGGTPLWNAVYAGMDSLA
                     AEPGRRVVLVLTDGLDSEALPGWKGDLDDVRSRAAREGFMLYMIGMDTVDTNDEPQRR
                     VNALIAETGGTRFDVKEGDDLHSTFTRVAEELRRQYLLGFAPEKRDGRAHRLEIRVTR
                     PGLEARGRKSYVAERR"
     gene            1331..>2043
                     /locus_tag="VFN38_09850"
     CDS             1331..>2043
                     /locus_tag="VFN38_09850"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HET9012105.1"
                     /translation="MLRSRRGFLEVLRGGRDAAAPAALWLAARGSEEYQAQAAQPSGQ
                     ATRPVIPPGVKEIRISSNENPLGPGKAAIDAIVRQFPEAGRYPFNSTPSEATLASAIA
                     AKFGVKPESIVLGAGSQEILKSAVRAFTSPTKGLVTASPSFENCPGIAKRLGHPVTEI
                     KVDAACRLDLDQMAAAAKGAGLVFLNNPNNPTATVHGAKTVTGMVERIRKASPDTVIL
                     IDEAYHDYVTDPSYKSAVEL"
BASE COUNT          333 a          697 c          709 g          304 t
ORIGIN      
        1 ggctctgacc tggccgtcga cccgaacctc gatctcgtcc ttcgacagat cggtcacgag
       61 cgtcccgttg gcagtcgtga cggcgacgtg cacgggaacc agccgcggtg cgttctgcgc
      121 cggcagcaaa cgcacgctcg cgacgatgag ggtggcgcac gcgaagggca ggcacagccg
      181 gcgctggaaa ggcatcagcg ccgctccgcg acgtagctct tgcgcccgcg agcctcgaga
      241 cccggacgtg tcacgcggat ctcgaggcgg tgcgcacggc cgtctcgctt ctccggcgcg
      301 aagcccagga ggtactgccg tcgcagttcc tcggcgaccc gcgtgaacgt gctgtgcaga
      361 tcatccccct ccttgacgtc gaagcgtgtg ccgccggtct cggcgatgag cgcgttgacc
      421 cggcgctgcg gctcgtcgtt ggtgtccacg gtgtccatgc cgatcatgta gagcatgaat
      481 ccctcgcgcg cggcgcgcga gcggacgtcg tcgaggtctc ctttccatcc cggcagggcc
      541 tccgagtcga ggccgtcggt gaggacgagc acgacgcggc gcccgggctc ggcggcgagc
      601 gaatccatgc cggcgtagac ggcgttccag agcggcgtgc cgccgccggg ccacagctcc
      661 tcgcgcacga tccgcgtcag caccgccttg tcacccgtga gcaccggact gatgccgatc
      721 tcgtcgccga acgtgccgat gcggacgcga tccgcgggcc gcagcgcgtc gatgaagcgc
      781 agggtcgaat cgcgaacgcg cacgagccgc gagagcatgc tgccgctcat gtcgagcagc
      841 agcgcgacgg taatcggctg gatgtcgttg gagaaggtcg cgatccggac gggggcgccg
      901 tcgtcgagca gcgcgaaatc gtcctgcgtc agatcgggga cgagtcgtcc ggcagcgtcc
      961 ctgaccgtcg cgtagacaac gaccgtctgc gtgctcgatt tgaatgtcgc ctgccgggcg
     1021 gtcagcccga tgccgatgcc cgctgcgaga cagagcgcaa cagccgcgcg cacgggttta
     1081 tggtggcaca gatcgcccgg ccggccggac gcgctcggcc gccgcgcgtg ctctcgcacg
     1141 tgcttcaatg tccgcgacct tggcgtcgtg cgtgtgcggc atgcccacga ggacctgcat
     1201 accgacagca cggtagcgtc ggggcttcat tcggccaaaa atgtagcctg tgccttcgca
     1261 gggaatgttt gacgcccccc gggcgcgagc gtagaatccg ctcacctgtt cgcagtggag
     1321 gaggcccatc atgctccgat cgcgccgtgg gttcctggag gttctgcgcg gagggcgcga
     1381 cgcggcggca cccgcggcgc tctggctcgc cgcgcgcggg agcgaagagt accaggcgca
     1441 ggcagcgcag ccctccggcc aggcgacgcg tccggtgatc ccgccgggcg tcaaggaaat
     1501 ccgcatcagc agcaacgaga acccgctcgg ccccggcaag gcggcgatcg acgccatcgt
     1561 gcggcagttc ccggaagcag gccgctatcc cttcaacagc acgccgtcag aagcgacgct
     1621 ggcgtcggcg atcgccgcga aattcggcgt caagccggag agcatcgtgc tcggcgccgg
     1681 ctcgcaggag atcctcaaga gcgccgtgcg ggcgttcacg tcgccgacca aggggctggt
     1741 gacggcgtcg ccgtcgttcg agaactgtcc ggggattgcc aagcggctcg gacatccggt
     1801 caccgagatc aaggtcgacg ccgcctgccg cctcgatctc gatcagatgg cggcggcggc
     1861 caaaggcgcc gggctggtct tcctgaacaa cccgaacaat cccaccgcga cggtgcacgg
     1921 cgcgaagacg gtgaccggca tggtcgagcg catccgcaag gcctcgcccg acacggtcat
     1981 cctgatcgac gaggcgtatc acgattacgt gaccgacccg tcgtacaaga gcgcggtcga
     2041 gct
//
LOCUS       DASSYW010000616         2845 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_728077, whole genome shotgun sequence.
ACCESSION   DASSYW010000616 DASSYW010000000
VERSION     DASSYW010000616.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2845)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2845)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2845
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_728077"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(44..1927)
                     /locus_tag="VFN38_09855"
     CDS             complement(44..1927)
                     /locus_tag="VFN38_09855"
                     /inference="COORDINATES: protein motif:HMM:NF012686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:solute symporter family protein"
                     /protein_id="HET9012106.1"
                     /translation="MNLHLVDVSIIAAYITATIVIGFWISKRASRSIRNYFLGGNTIP
                     WYVLGVSDASGMFDVSGTMWMVYLLFVYGLKSIWIPWLWPVFNQIILMVFLSTWLRRS
                     GVMTGAEWIRFRFGDGRASNLAHLIVVLFALLNVIGFLAYAFIGIGKFASTFLPWALS
                     ADPTTNAKLWGLLIIGITTLYVAKGGMFSVVFTEVLQFSIMTIASISVGILVMRQVSP
                     ELLNQFIPAGWRSPWFGRTLGLDWTALMPAVNTRIANDGWTMFSAFWGMLLFKGLLQA
                     GAGPAPNYDMQRILSTRSPRDAAKMNGFVNVVLLIPRYMLITGLTVLALAYFSPQLRA
                     MGDGVDFELILPLALKSFVPTGLLGLLIAALLAAFMSNFAATVNAAPAYIVNDIYRKY
                     VRPDADQRTLVRMSYLSSVGVVVIGTAMGFFVGSLNTMVQWIVSALYGGYTASNLLKW
                     YWWRFNAWGYFWGMVAGIAGAGLVPVLLPSVAPIFAFPAILALSLVGCIVGTLATPPD
                     DMAVLERFYLRVRPWGFWRPVHDRLAATHPGLVANGAFRRDMFNVVVGIVWQTALTAT
                     GIFIVLRDLRALAISVGLVLVSAVILKLTWYDRLEDFPADLRATDDREGAHERPVLAA
                     AAP"
     gene            complement(1932..>2845)
                     /locus_tag="VFN38_09860"
     CDS             complement(1932..>2845)
                     /locus_tag="VFN38_09860"
                     /inference="COORDINATES: protein motif:HMM:NF015585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="sialate O-acetylesterase"
                     /protein_id="HET9012107.1"
                     /translation="RALHAGRNVVAVRVEDTGGGGGIWGDSAGVFLDVGGAHRRLGGG
                     WKFRVGATSLQPDAQHINKVPTVLYNKMVHPLLGFPIKGVLWYQGESNADSAADARKY
                     EALFKTMITSWRREWGSGEFPFLWVQLANFMAGDSQPPAQSAWAILRDAQTAALALPK
                     TAQAVIIDIGEAQDIHPKNKHDVGARLALGARHVAYGQPVEHVGPTHRSHVVRGREIV
                     VRFDHAGGGLVSHAAGGAVGGFAIAGADRRFVWADARIEGNTVIVSSPQVASPVAVRY
                     AGGNNPTRASLYSKAGLPAVPFRTDAW"
BASE COUNT          495 a         1016 c          936 g          398 t
ORIGIN      
        1 cgaacgagca gcgcctcgtg cgcggcttcg aggtcgcgcc gcgtcacggc gcggccgcgg
       61 caagcaccgg ccgttcgtgc gccccctcgc ggtcgtcggt cgcacgcagg tccgccggga
      121 aatcctcgag cctgtcgtac caggtcagct tcaggatgac cgccgacacg agcaccagtc
      181 ccaccgagat cgccaacgca cggagatcgc gcagcacgat gaagatcccc gtcgccgtga
      241 gcgccgtctg ccagacgatg ccgacgacga cgttgaacat gtcgcgcctg aatgcgccgt
      301 tggcgacgag cccgggatgc gtcgccgcga gccggtcgtg caccggccgc cagaatcccc
      361 acgggcggac gcgcaggtag aagcgctcga gcaccgccat gtcgtcgggc ggcgtcgcca
      421 gcgtgccgac gatgcagccg accagcgaca gcgcgaggat ggcggggaag gcgaagatcg
      481 gcgcgacgct cggcagcagc accggcacga gccccgcgcc cgcgatcccc gccaccatgc
      541 cccagaagta cccccacgcg ttgaaccgcc accagtacca cttgagcagg ttcgacgcgg
      601 tgtacccgcc gtagagcgcc gacacgatcc actgcaccat cgtgttcagc gagccgacga
      661 agaaccccat cgccgtgccg atcaccacga cacccacgga gctgagatag ctcatgcgga
      721 cgagggtgcg ctgatcggcg tccggccgca cgtacttccg gtagatgtcg ttgacgatgt
      781 acgccggcgc cgcgttcacc gtcgccgcga agttcgacat gaacgccgcg agcagcgccg
      841 cgatgagcag cccgagcagt cccgtcggca cgaagctctt cagcgcgagc ggcaggatca
      901 gctcgaagtc cacgccgtcg cccatcgcgc ggagctgcgg gctgaagtac gccagcgcga
      961 gcacggtgag cccggtgatg agcatgtacc gcgggatgag cagcacgacg ttcacgaagc
     1021 cgttcatctt cgccgcgtcg cgcggggagc gcgtcgagag gatgcgctgc atgtcgtagt
     1081 tcggcgccgg tccggcgccc gcctggagca gccccttgaa cagcagcatc ccccagaacg
     1141 ccgagaacat cgtccagccg tcgttggcga tgcgcgtgtt gaccgccggc atcagcgcgg
     1201 tccagtcgag gccgagcgtg cggccgaacc acgggctccg ccatccggcg gggatgaact
     1261 gattcagcag ctcggggctc acctggcgca tcacgaggat cccgaccgag atgctcgcga
     1321 tcgtcatgat cgagaactgc agcacctcgg tgaacacgac gctgaacatc ccgcctttcg
     1381 ccacgtagag cgtcgtgatg ccgatgatca gcagccccca cagcttcgcg ttcgtcgtcg
     1441 ggtccgccga gagcgcccac ggcaggaacg tcgacgcgaa cttcccgatc ccgatgaatg
     1501 cgtaggcgag gaagccgatc acgttcagca gcgcgaacag cacgacgatg aggtgcgcca
     1561 ggttgctggc gcgtccgtcg ccgaaccgga agcggatcca ctcggccccc gtcatcaccc
     1621 ccgaccgccg cagccaggtg gagaggaaca ccatcaggat gatctggttg aacaccggcc
     1681 agagccaggg aatccagatg ctcttcaacc cgtacacgaa gagcaggtag accatccaca
     1741 tcgtgccgct gacgtcgaac atccccgacg cgtcggagac gccgagcacg taccacggga
     1801 tcgtgttccc accgaggaag tagttgcgga tcgagcgcga cgcgcgcttc gagatccaga
     1861 acccgatgac gatcgtggcc gtgatgtagg ccgcgatgat cgacacgtcc acgaggtgca
     1921 ggttcatcgt gctaccacgc gtcggtgcgg aacgggaccg ccgggagtcc tgccttgctg
     1981 tacaggctcg cgcgcgtcgg gttgttcccc ccggcgtacc gcacggcgac gggcgacgcg
     2041 acctgcgggc tcgacacgat caccgtgttc ccctcgatcc gcgcgtcggc ccacacgaac
     2101 cgtcggtcgg cgccggcgat cgcgaatccg cccaccgcgc cgccggcggc gtggctcacg
     2161 agaccgccgc cggcgtgatc gaaccgcacg acgatctctc ggccgcgcac gacgtgcgag
     2221 cggtgcgtcg ggccgacgtg ctccaccggc tggccgtacg cgacgtgccg cgcaccgagc
     2281 gcgagtcgcg cgccgacgtc gtgcttgttc ttcgggtgga tgtcctgcgc ctcgccgatg
     2341 tcgatgatca ccgcctgcgc ggtcttcggg agcgcgagcg ccgcggtctg cgcgtcgcgc
     2401 aggatggccc acgcgctctg cgccggcggc tgcgagtcgc ccgccatgaa gttcgcgagc
     2461 tgcacccaga ggaacgggaa ctctccggag ccccactcgc gccgccagct cgtgatcatc
     2521 gtcttgaaca gcgcctcgta cttcctcgca tccgccgcgc tgtcggcgtt cgactcgccc
     2581 tgataccaga gcacgccctt gatcggaaag ccgagcaggg ggtgcaccat cttgttgtag
     2641 aggaccgtcg ggaccttgtt gatgtgctgt gcgtcgggct ggagcgacgt ggcaccgacg
     2701 cggaacttcc acccgccgcc gagccggcgg tgcgcgccgc cgacgtcgag aaacacgccg
     2761 gcggagtcgc cccagatgcc gccaccgcca ccggtgtcct ccacgcgcac cgccacgacg
     2821 ttgcgccccg cgtgcagcgc acgcg
//
LOCUS       DASSYW010000617         3206 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1407642, whole genome shotgun sequence.
ACCESSION   DASSYW010000617 DASSYW010000000
VERSION     DASSYW010000617.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3206)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3206)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3206
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1407642"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..281)
                     /locus_tag="VFN38_09865"
     CDS             complement(<1..281)
                     /locus_tag="VFN38_09865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012108.1"
                     /translation="MSDVRRRHHLIVRITHWVNAIALTIMVGSGLRIFNAYPAFARKG
                     DTFCCYPFEGHKIPAWLTFGGWLAGARNWHFAMMWVLVVNGLVYLGFVYL"
     gene            complement(359..553)
                     /locus_tag="VFN38_09870"
     CDS             complement(359..553)
                     /locus_tag="VFN38_09870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012109.1"
                     /translation="MKLIRMVFLAMAVLLPSSWTLAHAGDDMKEGGGEMKKGKKKDKG
                     DMGGGDKGDMGKKKGDMEKQ"
     gene            692..991
                     /locus_tag="VFN38_09875"
     CDS             692..991
                     /locus_tag="VFN38_09875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012110.1"
                     /translation="MRRAVVVILLALLAIDVSGLSGLCGETSCDEPCPSDNSDGQCPP
                     NCHDCSCCSLPKVTGSAAPALVAPAARAQSWSGPIDRLPSPEPADILHVPKLSRA"
     gene            1071..2393
                     /locus_tag="VFN38_09880"
     CDS             1071..2393
                     /locus_tag="VFN38_09880"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HET9012111.1"
                     /translation="MNRTFVAATLVVASAWARAASADTPDISRTADPRAPDCATPLDA
                     DAVVRCALAASPEVRVARAQLEAAAGRRATAEILLPNNPTIAGTVSNRRRPPPETASV
                     LNWSVIVSQELQVGGQRAARIDEAEAAAGAAARRAKVADQEVAAGALAAYYEALAAQE
                     SLRFATQLAATAETLAAYAAARAKEALVAGVEADVARAEGARIGLVRIEAERRLTDAR
                     GALAVLLDVDPRRLRLPDALPQAQPPALPPGSLEEQALNLRGEVAAAEMERLVLERRL
                     AVVRRERVPNPTISAFFERGEINDRIIGVGLSVPLPLPAPVGRTRAGEIAETLAQIRA
                     AESSQDLVRRRVRLEVTRALAASQSRNAAGKLFPADLLARAQADLAALREAIASRQLT
                     LREGLQWQRSLIELLQADIEVRLARALAWVDLRRVVGLPLLSAAGGAR"
     gene            2576..>3206
                     /locus_tag="VFN38_09885"
     CDS             2576..>3206
                     /locus_tag="VFN38_09885"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HET9012112.1"
                     /translation="MTSAGIKTAPAVSASLPATVDLTGEIAADPDRSARLAARVPGRI
                     IDVKVKEGDRVKAGQTIAILESPELARARATLASASARAKVARLNADRLKSLEGKNLA
                     AGQEVAAASGEAAALDAEAAAARQTLSAFGQGADEAQGGSARVTIRTPLAGFVLSRDA
                     VQGQTLTPEHVIAVVGDLDHAYFLGRLFEKDLARVKVGASAEVRLNAYPS"
BASE COUNT          448 a         1166 c         1133 g          459 t
ORIGIN      
        1 aggtagacga acccgagata gacgagcccg ttcacgacca ggacccacat catcgcgaag
       61 tgccagttgc gcgcgcccgc cagccagccg ccgaacgtca gccaggcggg gatcttgtga
      121 ccttcgaagg ggtagcagca gaacgtgtcg cccttgcggg cgaacgccgg ataggcgttg
      181 aagatccgca gcccgctccc caccatgatc gtcagcgcga tcgcgttgac ccagtgggtg
      241 atgcggacga tcaggtgatg ccggcgccgg acgtcgctca tgagctaccc cgcgtgggaa
      301 cctccgcccc ggagattggc tccgccggga cggaggagga acagaaaaga gccgcctgct
      361 actgcttttc catgtctccc ttcttcttgc ccatgtcgcc cttgtcgccg ccgcccatgt
      421 ctcccttgtc cttcttcttt cccttcttca tctcgccgcc gccctccttc atgtcgtcgc
      481 cggcgtgcgc cagcgtccac gaactgggaa gcagcaccgc catcgccaga aacaccattc
      541 gaatcagctt catgtcgctc tccttgggtt gtttggtgcc ggggtcgtcg aacccgtgtc
      601 acctgatacg ccgcggtcgc ggtgcggtta cgcgcggtga tcgccggccg gccgcctggc
      661 ggccccctcc gtcttgtgcg atcctgcgtc cgtgcgtcgc gccgtcgtcg tcatcctgct
      721 ggcactgctc gcgatcgacg tgagcgggct gtcgggcttg tgcggggaga cgagctgcga
      781 cgagccgtgt cccagcgaca actcggacgg ccagtgtccg ccgaactgcc acgactgcag
      841 ctgctgttcg ctccccaagg tcaccggctc tgccgcgccc gcgctcgtcg ccccggcggc
      901 ccgcgcgcag tcctggagcg gcccgatcga tcgcctgccc tccccggagc cggcggacat
      961 cctgcacgtc ccgaagctct cccgcgcgta gcgaagccga ctgggcggac ctgcggccgg
     1021 cgcgtcgtgt gccggccgat ccgcccgtga cctagaaccg cgaggggacc atgaaccgca
     1081 cgttcgttgc ggcgacgctc gtcgtcgcca gcgcgtgggc gcgcgccgca tccgccgaca
     1141 cgcccgacat ttctcgaacc gccgacccgc gcgcgcccga ctgcgccaca ccgctggacg
     1201 cggacgcggt ggtgcgctgc gcgctcgcgg ccagccccga agtccgtgtg gcgcgcgctc
     1261 agctcgaggc ggcggccggc cgcagagcga ccgcggagat cctgctcccg aacaacccga
     1321 cgatagcggg cacggtgtcg aatcgccgcc gcccgccgcc ggagacggcg tcggttctga
     1381 actggagcgt gatcgtctcg caggagcttc aggtcggggg ccagcgcgcc gcgcgcatcg
     1441 acgaagcgga agcggcggcc ggcgccgctg cgcgccgggc gaaggtggcc gaccaagagg
     1501 tcgcagcggg tgccctggcg gcgtattacg aagcgctcgc cgcgcaggag tcgctgcgct
     1561 tcgccaccca gctcgcggcg accgcggaga cgcttgcggc gtacgccgct gcgcgcgcca
     1621 aggaggcgct ggtcgccggc gtcgaggccg acgtcgcgcg ggcggagggc gcgcgtatcg
     1681 gtctggtcag aatcgaagcc gagcgacgcc tcaccgacgc gcggggcgcg ctggcggttc
     1741 ttctcgacgt cgatccgcgc cgcctgaggc tgcccgatgc gctcccgcaa gcgcagcctc
     1801 cggcgttgcc gccgggctcc ctggaagaac aggcgctcaa cctgcgcggc gaggtcgcgg
     1861 ccgcagagat ggagcgcctg gtgctggagc gccggctcgc cgtggtccgc cgggaacgcg
     1921 tgcccaaccc gacgatctcg gcattcttcg agcgcgggga gatcaacgat cgcatcatcg
     1981 gtgtcggtct gtcggtcccg ctgccgctgc ccgctcccgt cggccgcacg cgcgccggcg
     2041 agatcgcgga gacgctggcg cagatccgcg ccgccgaaag ctcacaggat ctcgtgcggc
     2101 gccgcgtacg gctggaagtg acgagggccc tggcggcgtc tcaatcgagg aacgccgccg
     2161 ggaagctgtt tcccgccgat ctgctggcgc gcgcgcaagc ggacctggcg gcgctgcgcg
     2221 aggcgatcgc gtcgcgccag ctcacgctgc gtgaaggcct gcaatggcag cgaagcctca
     2281 tcgagctgct gcaggccgac atcgaggtcc gtctggcgcg ggcgctcgcg tgggtcgatc
     2341 ttcgccgcgt cgtcgggctg ccgctgctgt ccgcggcggg aggtgcgcga tgagggccct
     2401 ggcggggatg gccgccgcgc tgctggtgat gtcgggctgc ccgaagcggg cggcaccacc
     2461 ggccccgacc cgcgccgagg acagcggcgc accgccgccc ggaccgacgt cgcacgagga
     2521 cgagaccgag cagcacgagc agctccccac caaggtgcag ctccgtcccg aggtcgtgac
     2581 gtccgcgggc atcaagacgg ccccggccgt ttcggccagc ctgccggcca cggtggatct
     2641 caccggcgag atcgccgccg atccggatcg ctcggcccgc ctcgcggcgc gcgtccctgg
     2701 ccgcatcatc gacgtgaagg tcaaggaagg cgatcgcgtg aaggcgggcc agaccatcgc
     2761 gatcctggaa tcgccggagc tggcgcgcgc ccgggcgacc ctcgcctccg cgtcggcgcg
     2821 agcgaaggtg gcacgtctga acgcggaccg gctcaagagc ctcgagggca agaacctcgc
     2881 ggccggtcag gaggtggccg ccgcctcggg ggaggctgcc gcgctggatg cggaggctgc
     2941 ggcggcccgg cagacccttt cggcgttcgg acaaggcgcg gacgaggcgc aaggcggcag
     3001 cgcgcgggtc accatccgca cgccgctcgc cggctttgtt ctcagccgcg acgccgtcca
     3061 gggccagacg ctcacgcccg agcacgtgat cgcggtggtg ggcgacctcg accacgccta
     3121 ctttctgggc cgcctgttcg agaaggatct cgcgcgcgtc aaggtcggcg cgagcgccga
     3181 ggtccgactc aacgcctatc ccagcg
//
LOCUS       DASSYW010000618         2180 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1572276, whole genome shotgun sequence.
ACCESSION   DASSYW010000618 DASSYW010000000
VERSION     DASSYW010000618.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2180)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2180)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2180
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1572276"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(57..1607)
                     /locus_tag="VFN38_09890"
     CDS             complement(57..1607)
                     /locus_tag="VFN38_09890"
                     /EC_number="6.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016874 - ligase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA carboxylase subunit beta"
                     /protein_id="HET9012113.1"
                     /translation="MTMREKLGLLERRAAEAELGGGAARLKAQHEKGKLSARERLDLL
                     LDEGSFVELDRFVVHRSHDFGLEEQRIYGDGVVTGYGRIDGRLVYVFSQDFTVFGGSL
                     SEAFAEKICKVMDLAVRNGAPVIGLNDSGGARIQEGVVSLGGYADIFLRNTMASGVVP
                     QISAILGPCAGGAVYSPAITDFTYMVRKSSYMFVTGPNVVKTVTHEDVTMEELGGADT
                     HTQLSGVAHFAHDSEPASIQAIRDLFQFIPSNNLDEPPRGRGTDPRDRRDEALLDVVP
                     DNPNKPYDMHDVIRRIVDDGAFYEVQPDFAGNILCGFSHLGGYSVGIVANQPALLAGV
                     LDINASTKAARFIRFCDAFNIPLVTLEDVPGFLPGVAQEHNGIIRHGAKLLYAYCEAT
                     VPKLTVITRKAYGGAYDVMSSKHIRGDLNLAWPTAEIAVMGPKGAVEILFRKEITESD
                     DPAAATDAKINEYREKFAHPYVAAGRGYLDDIIDPRDTRPRLIDALETLRTKRDRNPP
                     KKHGNIPL"
     gene            complement(1665..>2180)
                     /locus_tag="VFN38_09895"
     CDS             complement(1665..>2180)
                     /locus_tag="VFN38_09895"
                     /inference="COORDINATES: protein motif:HMM:NF044751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012114.1"
                     /translation="RLLGFPIIGRRIARFVSQTGIRYRDSALSVEAHGAGRLPRHAPH
                     AGDRAPDVELGYQRRISDLLRGPQHTLLLFGGRSTALIERYSELAREVGARYGDLVKP
                     VVLRLPNAQPPRGEVDDTGAAHERYGADPGAIYLVRPDGYITFRGAETDTEVLRTTLR
                     ARFILPDPPKR"
BASE COUNT          316 a          731 c          766 g          367 t
ORIGIN      
        1 gaaatccgtg aaatctggga aatctgcgtt ctgcagtttc gttggagtcg agagcattag
       61 agcgggatgt tcccgtgctt cttcggcgga ttccggtcgc gcttcgtgcg aagggtctcc
      121 agcgcgtcga tcaatcgcgg ccgcgtgtcg cgcgggtcga tgatgtcgtc gaggtagcct
      181 cggccggccg cgacgtacgg atgcgcgaac ttctcgcgat attcgttgat cttggcgtcg
      241 gtcgccgcgg cgggatcgtc gctctcggtg atctccttgc ggaacaggat ctccaccgcg
      301 cccttggggc ccatcacggc gatctccgcc gtgggccagg cgagattgag atcgccgcgg
      361 atgtgcttgg agctcatcac gtcgtatgcc ccgccgtacg ccttgcgcgt gatgaccgtc
      421 agcttgggca ccgtggcttc gcagtaggca tacagcagct tggcgccgtg gcggatgatg
      481 ccgttgtgct cctgcgccac ccccggcagg aagcccggca cgtcctcgag cgtcacgagc
      541 ggaatgttga acgcgtcgca gaagcggatg aaccgcgccg ccttggtgga cgcgttgatg
      601 tcgagcaccc cggccagcag cgccggctgg ttggcgacga tgcccacgct gtatccgccg
      661 aggtgcgaga acccgcagag gatgttcccg gcgaagtcgg gctgcacctc gtagaacgcg
      721 ccgtcgtcca cgatgcgccg gatgacgtcg tgcatgtcgt acggcttgtt cggattgtcg
      781 ggtacgacgt cgagcagcgc ctcgtcacgc cggtcgcgcg gatcggtgcc gcgtccgcgc
      841 ggcggctcgt cgagattgtt gctcgggatg aactggaaga ggtcccggat cgcctggatg
      901 gaggcgggct cggagtcatg ggcgaagtgc gccacgccgg agagctgcgt gtgcgtgtcg
      961 gcgcccccca gctcctccat cgtcacgtcc tcgtgcgtca ccgtcttcac gacgttgggg
     1021 ccggtgacga acatgtagct cgactttcgc accatgtagg tgaagtcggt gatggccggc
     1081 gagtacacgg cgccgccggc gcacgggccg aggatggcgc tgatctgcgg gaccacgccc
     1141 gacgccatgg tgttgcgcag gaagatgtcg gcgtatccgc ccagcgagac cacgccctcc
     1201 tggatgcggg cgccgccgga atcgttcagc ccgatcaccg gcgcgccatt ccgcaccgcg
     1261 aggtccatca ccttgcagat cttctcggcg aacgcctcgc tcagcgaccc gccgaacacg
     1321 gtgaagtcct gcgagaagac gtagacgagc cggccgtcga tgcggccgta gccggtgacg
     1381 acgccgtcgc cgtagatgcg ctgctcctcg agcccgaagt cgtgcgaccg gtgcacgacg
     1441 aaccggtcga gctccacgaa gcttccctcg tccaggagca ggtcgaggcg ctcgcgcgcc
     1501 gacagcttgc ccttctcgtg ctgcgccttc aaccgtgccg ccccgccgcc cagctccgct
     1561 tccgcggcgc ggcgctcgag caggccgagc ttctctcgca tcgtcatagg cggggaagct
     1621 agcgccgctc actgcggggt accagcacgc cgcggcgtgc gcggtcagcg cttgggcggg
     1681 tcgggcagga tgaagcgcgc gcgcagcgtc gttcgcagga cctccgtatc ggtctccgcg
     1741 ccgcggaacg tgatgtaccc gtccggccgc acgagataga tcgcccctgg gtcggcgccg
     1801 tagcgctcgt gcgccgcgcc ggtgtcgtcg acctcgccgc gcgggggctg cgcgttgggt
     1861 agccggagga cgacgggctt cacgaggtcg ccgtagcgtg cgccgacctc gcgcgccagc
     1921 tcgctgtagc gctcgatgag cgccgtggac cggccaccga agagcagcaa ggtatgctgc
     1981 ggcccgcgca gcaggtcgga gatccgtcgc tgatagccca gctccacgtc gggggcgcga
     2041 tctccggcat ggggcgcgtg ccgcggcagc cgccccgccc cgtgcgcctc caccgacagc
     2101 gcgctgtcgc ggtagcggat ccccgtctgc gagacgaacc gcgcgatgcg cctgccgatg
     2161 atcgggaagc cgagcaggcg
//
LOCUS       DASSYW010000619         2392 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_640484, whole genome shotgun sequence.
ACCESSION   DASSYW010000619 DASSYW010000000
VERSION     DASSYW010000619.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2392)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2392)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2392
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_640484"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            146..1324
                     /locus_tag="VFN38_09900"
     CDS             146..1324
                     /locus_tag="VFN38_09900"
                     /inference="COORDINATES: protein motif:HMM:TIGR01420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043107 - type IV pilus-dependent motility
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus twitching motility protein PilT"
                     /protein_id="HET9012115.1"
                     /translation="MNFDFADILIDVIEAGASDLHLSAGAEPMVRERGRLRALDYPKM
                     SPQDIREIVYSILNNDQRKKLENEWQIDLSYSVPGRARFRVNAYFQRASIGAVLRTIP
                     QDIPPFESLGLPEILKDFTNKPRGFVLVTGPTGSGKSTTLASMIDMINEQRHEHIMTI
                     EDPIEFLHRHKNCVVNQRELGADAQSFASALKSALRQDPDVILVGEMRDLETMQTALT
                     AAETGHLVFATLHTQDTAQTVDRIVDAFPPEQQHQVRTQLSIALQGIVTQQLLPTADG
                     RSRVCATEILVPTPAVRNLIREGKTHQIYSALQTGGTHGMQTMDAALADLVRGGQITP
                     QLAESRSSTPEELKRLMGGTISGPGGSMGGGMGGGMGGSMGGGMGAPMGAPPATGKNY
                     "
     gene            1328..>2392
                     /locus_tag="VFN38_09905"
     CDS             1328..>2392
                     /locus_tag="VFN38_09905"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HET9012116.1"
                     /translation="MATFAFKALDLSGVHTRGEIEADDKKTVASQLRGKGLIVLDIEE
                     QKSAADVGEMLGRFKKVKAQELTVATRQLSTMISSGMSLLRALYVLEEQAKSDKMREA
                     LIQVRKDVEAGISLSDALRRHPDIFNHLYVAMVEAGELGGILEETLHRVADQLEKDDS
                     LRRQVKAAMMYPILIGGFALTVLLALVTFLVPVFEKVFKDFGGDLPAITKLTVAMSHA
                     VTGQWYLLFGGTFGAILLFRRWKKTEKGREQWDRFKLRIPWKIGDIVQKVCLARFSRT
                     YSALIAAGVPMLQAIEITGKTSGNKVIENAMEAVKESVKGGGSISTPMRAEPTAFPTM
                     VTQMIAVGEETGALETMLSKV"
BASE COUNT          432 a          852 c          768 g          340 t
ORIGIN      
        1 gatgcgcgcg aaggcagtgg agcaggggaa gcgcctgctc aaggacgacg gcctggagaa
       61 ggtccgcctc ggcgtcacct cgatcgccga agtgtcgcgc gtcacctgat ctaaagcctc
      121 tgccgataaa ggacacgacc ctctgatgaa cttcgacttc gcggacatcc tcatcgacgt
      181 gatcgaggcc ggcgcctccg acctccacct cagcgccggc gccgagccga tggtgcgcga
      241 gcgcggccgt ctgcgcgcgc tcgactaccc gaagatgtcg ccgcaggaca tccgcgagat
      301 cgtctattcg atcctcaaca acgaccagcg caagaagctg gagaacgagt ggcagatcga
      361 tctctcgtac tccgtgcccg gccgggcacg cttccgcgtg aacgcctact tccagcgcgc
      421 ctcgatcggc gccgtgctgc gaacgatccc gcaggacatc cccccgttcg agtcactcgg
      481 gctgccggag atcctcaagg acttcaccaa caagccgcgc ggcttcgtgc tcgtcaccgg
      541 tccgaccggc tccggcaagt ccacgacgct cgcctcgatg atcgacatga tcaacgagca
      601 gcgccacgag cacatcatga ccatcgagga tccgatcgag ttcctccacc ggcacaagaa
      661 ctgcgtggtc aaccagcgtg agctcggcgc cgacgcgcag agcttcgcga gcgcgctgaa
      721 gtcggcgctc cgccaggacc cggacgtgat cctcgtgggc gagatgcgcg acctcgagac
      781 gatgcagact gcgctcaccg cggcggagac cggccacctc gtgttcgcca cgctccacac
      841 ccaggacacg gcgcagacgg tggaccgcat cgtcgacgcg ttcccgcccg agcagcagca
      901 ccaggtgcgc acccagctct cgatcgccct ccagggcatc gtcacgcagc agcttctgcc
      961 cacggccgac ggccgcagcc gcgtctgcgc caccgagatc ctcgtgccca ccccggcggt
     1021 gcgcaacctg atccgcgagg gcaagacgca ccagatctac tccgcgctcc agaccggcgg
     1081 cacgcacggc atgcagacga tggacgcggc cctggccgac ctcgtccgcg gcggccagat
     1141 cacgccgcag ctggccgagt cacgctcgtc cacgcccgag gagctcaagc ggctcatggg
     1201 cggcacgatc agcggccccg gcggctcgat gggcggcggc atgggcggcg gcatgggcgg
     1261 ctcgatgggc ggcggcatgg gggccccgat gggcgctccc ccggcgaccg gaaagaacta
     1321 ctaggcgatg gccacgttcg cattcaaggc gctcgacctc tccggcgttc acacgcgcgg
     1381 cgagatcgag gccgacgaca agaagacagt cgcctcgcag ctgcgcggca agggcctgat
     1441 cgtcctcgac atcgaggagc agaagagcgc cgccgacgtc ggcgagatgc tcggccgctt
     1501 caagaaggtc aaggcgcagg agctcaccgt cgccacgcgc cagctctcga cgatgatctc
     1561 gtccggcatg tcgctcctgc gcgcgctgta cgtgctcgag gagcaggcga agagcgacaa
     1621 gatgcgcgag gcgctgatcc aggtccgcaa ggacgtggag gccggcatct cgctctccga
     1681 cgcgctgcgg cgccatcccg acatcttcaa ccacctctac gtggcgatgg tcgaggccgg
     1741 cgagctcggc ggcatcctgg aggagacgct ccaccgcgtc gccgaccagc tcgagaagga
     1801 cgactcgctc cgccgccagg tgaaggccgc gatgatgtac ccgatcctca tcggcggctt
     1861 cgcgctcacc gtgctcctgg cgctcgtcac cttcctcgtc ccggtgttcg agaaggtgtt
     1921 caaggacttc ggcggcgacc tgcccgccat caccaagctc accgtggcga tgtcgcacgc
     1981 cgtcaccggc cagtggtacc tgctcttcgg cggcacattc ggggcgatcc tcctgttccg
     2041 ccgctggaag aagaccgaga agggccgcga gcagtgggac cgcttcaagc tccgcatccc
     2101 gtggaagatc ggcgacatcg tgcagaaggt ctgcctcgcg cgcttctcgc gcacctactc
     2161 ggcgctgatc gccgcgggcg tgccgatgct ccaggcgatc gagatcaccg gcaagacctc
     2221 gggcaacaag gtcatcgaga acgccatgga ggccgtcaag gagtccgtga agggcggcgg
     2281 ctcgatcagc accccgatgc gcgcagagcc caccgccttc ccgacgatgg tcacgcagat
     2341 gatcgccgtc ggcgaggaga cgggcgcact cgagacgatg ctctcgaagg tc
//
LOCUS       DASSYW010000620         2934 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1255890, whole genome shotgun sequence.
ACCESSION   DASSYW010000620 DASSYW010000000
VERSION     DASSYW010000620.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2934)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2934)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2934
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1255890"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            174..545
                     /locus_tag="VFN38_09910"
     CDS             174..545
                     /locus_tag="VFN38_09910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012117.1"
                     /translation="MKHTGALRVTSLVSLLLLTVHMTHDVLGQRDGAVLYPIPVAIFA
                     VWLYATLVLSDRVWGHVVMLLGGLFSAGMIVVHSRGFVVGKSGGFFVVWTLFALATTG
                     WVTMILSAQGLWTAYRARRGA"
     gene            651..911
                     /locus_tag="VFN38_09915"
     CDS             651..911
                     /locus_tag="VFN38_09915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012118.1"
                     /translation="MRARIVAAFWATSLVACSATGFDLQRASARAMTPTPYPDSVTIS
                     DVRRDRLGNVRKWVATSRDGVFDCSLEDQERTPLCARRDARR"
     gene            complement(965..2377)
                     /locus_tag="VFN38_09920"
     CDS             complement(965..2377)
                     /locus_tag="VFN38_09920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012119.1"
                     /translation="MSRAAFTLGVCVLVTASGAAITPLEAQGAHVVPEPASLVAMTVS
                     ARLRNVLGARVMKAGPLDSAPETHDGEILSPKSVRFSLDGTKVYVNALEGGRTLVYEW
                     PSLRKLPTIVHRFGRADSALFRGRSTVFHYRYFTRSPGGSANVFTGRPVESELSKDGH
                     WLFIPYYRRSFDTSAQSPSALAVIDARVDSIVRVLPTGPIPKYVAASPDGRFLAVTHW
                     GDNTIALLDVSSGDPAKFHYVRRLTVEQRLDQAPLAGTDRDRTCGYCLRGTVFTADGR
                     TLLVARMGEKGGVAGFDVASGRYLGTVMGVPRTPRHLELSPDGATLFASSMQAGVVSR
                     VSTARVVAALRRARRRRVRGPRWRSVRVGGGARTIALDPSGTVLLAALNSRSEIVAVD
                     PTRLTVLARVRVAPYAVGLAIAPDGSGAIVTSQGHIAPEGSAARKQGLRLGGNSVDVL
                     RLTWGDDELRMSKQAGSSIP"
     gene            2656..2883
                     /locus_tag="VFN38_09925"
     CDS             2656..2883
                     /locus_tag="VFN38_09925"
                     /inference="COORDINATES: protein motif:HMM:NF018599.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1272 domain-containing protein"
                     /protein_id="HET9012120.1"
                     /translation="MEIALMSLEMRPACEKCNAPLAPDRDAAICSYECTFCVGCTAAM
                     QRTCPNCGGELVERPKRIRASKQAQCSIAVG"
BASE COUNT          432 a          999 c         1023 g          480 t
ORIGIN      
        1 gacgcgttgg taccatgagt gccatcatct cgtcctcgat gaatgagcga ttcgcattgg
       61 actggccagg cgggccggat caggtagcgg cgctggcggc gccctgttct attctactcg
      121 ctggtgcggg ctcggacatc gccggggccc gagaggcatc gcccgaaacg ccgatgaagc
      181 acactggtgc gctgagggtc acgtccctgg tctcgctgct gctgctgacc gtgcacatga
      241 cgcacgacgt cctcggccag cgcgacggcg cggtcctgta tcccatcccc gtcgccatct
      301 ttgccgtgtg gctctacgcc accctcgtgc tgtccgaccg ggtgtggggg catgtcgtca
      361 tgctgctcgg cgggctgttc agcgcgggca tgatcgtcgt ccactcgcgg ggattcgtcg
      421 tcggcaagtc cggcggcttc ttcgtcgtgt ggacgctgtt cgccctcgcg accacaggat
      481 gggtcaccat gatcctctcc gcgcagggct tgtggacggc gtaccgcgct cgccgcggtg
      541 cgtgatgccg accgcgtcac gggccgcccg gcagcggtcc gtggtgtgat tgcgtatctc
      601 gggcatcgtg tcacgacgtg catcgatccg accaccagtg gggtgactcc atgcgagctc
      661 gcattgtcgc agctttctgg gcgacgtcgc tcgtcgcctg ttcagccacc ggcttcgacc
      721 ttcagcgggc ctccgcgcgg gcgatgactc cgacgccgta cccggactcg gtcacgatct
      781 ccgacgtccg ccgcgatcgg ctgggcaacg tgcggaagtg ggtcgccacg tcccgggacg
      841 gcgtgttcga ctgcagcctc gaggaccagg agcgcacgcc gctctgcgcc aggcgcgacg
      901 ctcgacgctg aatcgcacgg ggtgagctcg cggaccacgg cgaatgccgt ggcccgtcgt
      961 cgcctcaggg aatgctgctg cccgcctgct tcgacatccg cagctcgtcg tccccccacg
     1021 tgagccgcag cacgtcgacg ctgttgccgc cgaggcggag accctgcttg cgcgccgccg
     1081 agccttccgg cgcaatgtgc ccctgcgacg tcacgatcgc cccggatccg tccggcgcga
     1141 tcgccagtcc cacggcgtac ggcgccacgc gcacgcgcgc cagcaccgtg agtcgcgtcg
     1201 ggtccacggc gacgatctcc gagcgcgagt tcagcgccgc gagcagcacg gtacccgatg
     1261 gatcgagcgc gatcgttcgc gcgccgcctc ccacgcgcac gctgcgccag cgcggcccgc
     1321 gcacgcgccg gcgccgtgcc cgcctcagcg ccgcaaccac tcgcgcggtg ctcactcggc
     1381 tcactacgcc ggcttgcatc gacgaggcga acaacgtggc gccgtcaggt gagagctcga
     1441 gatggcgcgg cgtccgcggc acgcccatca ccgtgccgag gtagcgcccc gacgcgacgt
     1501 cgaagccggc gacgcctccc ttctcgccca tgcgcgcgac gagcagcgtg cgcccgtcgg
     1561 cggtgaacac cgtcccgcgc agacagtagc cgcaggtgcg atcgcggtcc gtgccggcca
     1621 gcggcgcctg gtcgagccgc tgttcgacgg tcaggcggcg cacgtaatgg aacttcgccg
     1681 gatcgccgct cgacacgtcg agcagcgcga tggtgttgtc tccccagtgc gtgaccgcga
     1741 ggaaccgtcc gtcgggcgac gccgcgacgt acttcgggat cggtcccgtc ggcaggaccc
     1801 gcacgatgct gtcgacgcgc gcgtcgatca cggccagcgc cgacggcgac tgcgcggagg
     1861 tgtcgaagct gcggcggtag tacgggatga agagccagtg tccatccttc gacagctcgc
     1921 tctccaccgg ccggccggtg aagacgttgg ccgagccgcc gggggagcgc gtgaagtacc
     1981 tgtagtggaa caccgtgctc ctgccgcgaa agagcgcgga atcggcgcgg ccgaagcggt
     2041 ggacgatcgt cggcagcttg cgcagcgatg gccactcgta gacgagcgtc cgccctccct
     2101 cgagcgcgtt cacgtacacc ttcgtcccgt cgaggctgaa gcggacgctc ttggggctga
     2161 ggatctcgcc gtcgtgcgtc tctggtgccg agtcgagggg gccggccttc atcacgcgtg
     2221 cgccgaggac gttgcgcagg cgcgcactca ccgtcatcgc gacgagactc gcaggctcgg
     2281 gtacgacgtg cgcgccctgg gcttcgagcg gcgtgatcgc ggcgccggat gcggtgacaa
     2341 gcacgcagac gccgagggtg aacgcggctc gcgacatgag tcggtgagcg ggttgggggg
     2401 gccggcgggg agggcgaaag ccggcgaacg tcgtcaccta gaatacgcgc ggctggtgtg
     2461 cccggtcacg tgtgcgcagg ctcgaattct cgcgccgcgc tcgtgggcgt ggccatcgat
     2521 gcgccaagtg cctatttggg tgagagtctc tctaatgaag cagggttggg tgcaaccggg
     2581 ccgcgggaat agatccgcgg gcaaagtggt ctggagtgag aaggaagcga caattcactc
     2641 cctcgtggac caaccatgga gatcgccctc atgagtctcg agatgcggcc ggcttgtgaa
     2701 aagtgcaacg cgcccctcgc tccggatcgc gacgccgcga tctgcagtta cgaatgtacg
     2761 ttctgcgtgg gctgcaccgc ggccatgcaa cgcacatgtc ccaactgcgg cggcgagctg
     2821 gtcgaacgtc cgaagcggat ccgggcctcc aagcaggctc aatgcagcat cgccgtgggc
     2881 tgaaccagtt cgttggcggt ggcctcgacg gcagcgggtg tcgatcgtac gttc
//
LOCUS       DASSYW010000621         2873 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_240577, whole genome shotgun sequence.
ACCESSION   DASSYW010000621 DASSYW010000000
VERSION     DASSYW010000621.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2873)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2873)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2873
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_240577"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(82..1119)
                     /locus_tag="VFN38_09930"
     CDS             complement(82..1119)
                     /locus_tag="VFN38_09930"
                     /inference="COORDINATES: protein motif:HMM:NF021553.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2278 family protein"
                     /protein_id="HET9012121.1"
                     /translation="MPIAKYGLLVGRPLHGVPGRGTNAHYQVHVVDDITEYRIAVNVK
                     SQLAPSEVEYLVDDDFRHPITTALRGRAPGFYRLGHLPTDGGLDYIRGNLFDRTRMRP
                     LPMNLPGPDDDLNDQVDRVMQAAIAEEDALIYAFGQRWGPEDDARDKIFGFLPGNGIH
                     DIHMNQGNSGRFVDDDGVWQDGGLLVYFPSVDRWTAIFLKFQSQSWHTDDVNGHTIAT
                     PVPHTPPDVPPPPPPIEPGSPDLRIRIVAALVNPAGGDQGHETVTLLNVTDADQPLAG
                     WAIANRTKAKFGLTGVIKAGATLTITLPVDVPLSNDGGLITLLDGAGLKVHGVSYTKA
                     QVARQGWTVVF"
     gene            complement(1173..2198)
                     /locus_tag="VFN38_09935"
     CDS             complement(1173..2198)
                     /locus_tag="VFN38_09935"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0070007 - glutamic-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PrsW family glutamic-type intramembrane
                     protease"
                     /protein_id="HET9012122.1"
                     /translation="MLLNVVVAFVPVLLFLVLLVLMDSFKLARPSAIAKSIGWGIVAA
                     LVCDVLYRLLTPLLPLSPTAFSRYVAPLTEETAKAAFIVYLIRGRRIGFPVDAAQLGF
                     AVGTGFALVENLQYLRVLGNAGVVLWLVRGLGTAMLHGATIAIFAMLAQTAADRQPNR
                     LVTAFVPGWLAAVAIHSAFNHVPLPPVAMTGLLMVALPALVLFVFQRSEAATRDWVSA
                     GLDLDLVMLEVFSSQGFSHTRFGRYLSELRDRFPGPVVADMLCLLRVELELSVQAKAA
                     VMVREAGVILPVHDDTRHALAEVQYLRASIGTTGILALQPFGVTSHRDDWHRYLLAGP
                     DAKQRKS"
     gene            complement(2233..>2873)
                     /locus_tag="VFN38_09940"
     CDS             complement(2233..>2873)
                     /locus_tag="VFN38_09940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012123.1"
                     /translation="TAEVGLRYSNVRRSLGAVDDEKGTAATAVLTTNTFEGRTVPQLR
                     GTFDFGFALPPHASIWSRTAIGAARGDRTDSAANFYFGAFGNNYVDHKDEQRYREYQS
                     LPGLEINEAGGRNFVKSLVEWTVPPVRFSRAGTPGFYLTWVRPSVFVSGLVTNLDARA
                     ARRKVTNAGAQLDFRLSALSSLDLTLSVGGAVAFTDGSRPRREAMISLKVLR"
BASE COUNT          481 a          992 c          975 g          425 t
ORIGIN      
        1 gaccccgaag atgctgcgct cgtcgttccc ccccacaccc gtcttgatcg tcagccgact
       61 ccaagcaggt gtttcatggc cctagaaaac aacggtccat ccctgtcgcg caacctgcgc
      121 tttcgtgtac gacacgccgt gcaccttgag accggcgccg tcgagcagcg tgatcaggcc
      181 gccgtcgttc gacagcggaa cgtccaccgg caacgtgatc gtcagcgtcg ctccagcctt
      241 gatgacgccc gtgaggccga acttcgcctt cgtgcggttc gcaatcgccc agcccgccag
      301 cggctggtcc gcgtcggtga cgttcagcaa ggtcacggtc tcgtgcccct ggtcgccccc
      361 ggccgggttc acgagcgcgg cgacgatgcg aatccgcagg tccggactgc ccggctcgat
      421 gggcggcggc ggcggcggga catcaggcgg cgtgtggggc accggcgtgg caatcgtgtg
      481 cccgttgacg tcgtcggtat gccagctctg cgactggaac ttgaggaaga tcgcggtcca
      541 ccgatcgacc gacggaaagt agaccagcag gccgccgtcc tgccacacgc cgtcgtcgtc
      601 cacgaaccgg ccgctgttgc cctggttcat gtggatgtcg tggatgccgt tgcccggcag
      661 gaacccgaag atcttgtcgc gcgcgtcgtc ttcgggcccc caccgctggc cgaaggcgta
      721 gatcagcgcg tcctcttccg cgatcgccgc ctgcatcacc cgatcgacct ggtcgttcag
      781 gtcgtcgtcg ggaccgggca ggttcatcgg cagcgggcgc atccgcgtgc ggtcgaagag
      841 gttgccgcgg atgtagtcga gcccgccgtc ggtcggcagg tgcccgaggc ggtagaaacc
      901 gggcgcgcgg ccgcgcagcg ccgtggtgat cggatggcgg aagtcgtcgt ccaccaagta
      961 ctccacctcg gacggcgcga gctgcgactt cacgttcacc gcgatgcggt actcggtgat
     1021 gtcgtccacg acgtgcacct gatagtgcgc gttagtgccg cggccgggga cgccgtgcag
     1081 cggccggccg acgaggagac cgtatttcgc gatgggcatg ggcgggcgcg ctccttgtga
     1141 ggaacaacga tgccacgccc gaatccgaac acctaggact tgcgctgctt cgcatccggc
     1201 cccgccagca ggtagcggtg ccagtcgtcc cgatgagatg tcacgccgaa cggctggagc
     1261 gccaggatcc cggtggtgcc gatcgacgcg cggaggtatt gcacctcggc gagcgcgtgc
     1321 cgcgtgtcgt cgtgcaccgg caggatgacg ccggcttcgc gcaccatcac cgccgccttg
     1381 gcctgcaccg acagctcgag ctccacgcgc agcagacaca gcatgtcggc caccaccggt
     1441 ccgggaaacc ggtcgcgcag ctccgacaga tagcggccga accgcgtgtg gctgaacccc
     1501 tgcgacgaga acacctcgag catcacgagg tcgaggtcga gcccggcgct cacccagtcg
     1561 cgcgtcgccg cctcgctgcg ctggaagacg aagagcacga gcgccggcag tgccaccatc
     1621 agcagaccgg tcatcgccac cggcggcagc ggaacgtgat tgaacgccga gtgaatcgcc
     1681 accgccgcca gccagccggg cacgaacgcc gtcaccagcc ggttcggctg ccgatccgcg
     1741 gcggtctgcg ccagcatcgc gaagatcgcg atcgtggcgc cgtgcagcat ggcggtgccg
     1801 agcccgcgca ccagccacaa caccacgccg gcgttcccca gcacgcgcag gtattgcagg
     1861 ttctcgacca gcgcgaagcc ggtgccgacg gcaaagccga gctgcgcggc atcgacggga
     1921 aagccgatgc ggcggccgcg aatcaggtag acgatgaacg ccgccttggc cgtttcttcg
     1981 gtgagcggcg ccacgtagcg gctgaacgcc gtgggcgaga gcggcaggag cggcgtcagc
     2041 agccgataca gcacgtcgca gaccagggcg gccacgatgc cccagccgat cgacttggcg
     2101 atggcgctgg ggcgggccag cttgaagctg tccatgagca ccagcagcac caggaacagc
     2161 agcaccggca cgaaggccac gacgacgttg agcagcatgc ggcgagggtc ccgcctccga
     2221 gtctagcgag gtctagcgaa gcaccttcaa tgaaatcatc gcctcgcgcc gcggccggga
     2281 gccgtccgtg aacgcgacgg cgccacccac cgacagcgtg aggtcgagcg acgagagcgc
     2341 gctgagccgg aagtcgagct gtgcccccgc gttcgtgact ttgcggcgcg ccgcccgggc
     2401 atccagattc gtcacgagcc cgctcacgaa caccgacggg cgcacccacg tgaggtagaa
     2461 ccccggcgtg ccggcgcggc tgaaccgcac cggcggcacg gtccattcga cgagcgactt
     2521 cacgaagttg cggccgccgg cctcgttgat ctccaggccc ggcagcgact gatactcgcg
     2581 atagcgctgc tcgtccttgt gatcgacgta gttgtttccg aacgcgccga agtagaagtt
     2641 cgcggcgctg tcggtgcggt cgccgcgtgc cgcaccgatc gcggtacgcg accagatcga
     2701 cgcgtgcggc ggcaacgcga agccgaagtc gaacgtgccg cgcagttgcg gcacggtcct
     2761 gccttcgaac gtgttggtgg tgagaacggc ggtggcggcc gtccccttct cgtcgtcgac
     2821 cgctccgagc gagcggcgca cgttgctgta gcgcaggccg acctcggccg tca
//
LOCUS       DASSYW010000622         9951 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1381278, whole genome shotgun sequence.
ACCESSION   DASSYW010000622 DASSYW010000000
VERSION     DASSYW010000622.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 9951)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9951)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9951
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1381278"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            362..3676
                     /locus_tag="VFN38_09945"
     CDS             362..3676
                     /locus_tag="VFN38_09945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HET9012124.1"
                     /translation="MPLHRTLAAALTVAVALPAAAQTRMLRSPSVSQRHIAFAHAGNI
                     WIVERSGGAARRLTSFAGEASNPKLSPDGSRVAFSAQYAGNVDVYVVPAEGGEPNRLT
                     FHPGADMVQGWTPDGSAIVFASGRATDAPVAVPRFYQVKLAGGPEIPMPMPRAFQGKI
                     SPDGKRIAYRMNSSWDEERRNYRGGQNRPIWIEDLASHEVTTVPWQDSKEMDPAWVGD
                     VVYFLSDRDGVSNVWSYDTRTKALGQVTKFRDFDVKTLDASTSANAVVFEQGGWVHEL
                     DPATGRERTVSIAANGDFPWMMPQWKDVTQRVVRLALSPTGKRAAVEARGEIFTVPAE
                     KGDARNLSASNGSAERDPAWSPDGKSISWFSDASGEYKLVISSQDGTGKREIALPEPS
                     HFYTPQWSPDAKRILFHDTHLRLWVVDVASGRATQVDTDPFMMPDRSLNPRFSPDGRW
                     IAYSRRLPSMFRAIFVYDVESGRKQQLTDGLADATSPAWDASGKYLWFLASTNFGLNS
                     GWLDMTSYDHPTTSALYLAVLKKGEPSPLLPESDEESAAVAAARGDSARAAAPAGPGD
                     SVRTARASRPVVTIDLDGIAQRIVAVPSLAQRDYRELEAGAAGTIFWVENTPATGTAE
                     TTGPTGGVLHRYTLKERKALSFASNVVDYAVSADGKKLLYRTPGAAGGLYLVDADKAP
                     PAAAAGKLAMQLRMLVDPRAEFAQIFDEGWRNQRDYLYVKNMHGSDWPAMKKMYGALL
                     PSVNHRADLNYLLDMMGAELAIGHSFVRGGDIPEVQPTTAGLLGADFTVENGRYRIAK
                     VYDAESWNPDLRAPLAAPGVDVRAGEYLLSVNGVELRGSDNVYRLLDGTANRQTVLRV
                     SPRPSLDGARTVTVVPVPNDAGLRSRAWVEKSRRLVDSLSGGTLAYVWVPNTGQGGYQ
                     SFNRYYFAQQHKRGAIIDERYNGGGSAADYIIDLLGRQFDGYFNNPVGDRYPFTSPAA
                     GIWGPQVMIINEMAGSGGDLMPYMFQHRRIGPLVGKRTWGGLVGTWDTPPFVDGGAMI
                     APRGGFFDLNGRWAVENVGTSPDIDVENWPREVIAGRDPQLERAVAEALKMAREKPLV
                     RATKEPPGATWGERKP"
     gene            complement(3756..4073)
                     /locus_tag="VFN38_09950"
     CDS             complement(3756..4073)
                     /locus_tag="VFN38_09950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012125.1"
                     /translation="MDNDVLMFAQVMTVLVLSTAGFVAIGLGGRILWRWGSHAKPSSL
                     APRHDDDRMLRLETAVDTIAIEVERISEAQRFMVGLLSEATPARRAELASPARSERTD
                     TPH"
     gene            4297..5766
                     /locus_tag="VFN38_09955"
     CDS             4297..5766
                     /locus_tag="VFN38_09955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012126.1"
                     /translation="MSSTTSRRPKGRFVTLALAAGLALATACGGDSTGPEQGPPSLTV
                     VNGVPHPTGLVGMTVAIQGVNLGDAANGKVFFTPTGGTPIQATIANAADWSDAFVVTT
                     VPAGITADANITVQTAVGTSNPVPFTLVSSAAFSPSTITWTRTTDLPVALQGLGAVYV
                     PVTTGTTHPSYVYTVGGADAANVAVTTMYRAQVQTSGALGAWSTMTPLPAARAYHTVV
                     AATAYTAPLDTTTTAAYVYAVGGVDATAQTVSSVYVTKVSPDGTVGAWQSTTALPAAL
                     HSAAGAVFRGYLYLVGGADNANAPVATTYRAAVKADGTLGAWETLAPLPQATSHLSLT
                     QFGPYLYAVGGNLGTVTPVLNTSTTTESGMVYAATINLRDGSLGSAGWVTQTSMTKAR
                     SKHSTLAAGGALLTSSGVYGGAAGSSENSYALLNASGGVGSWQGATGVNTIASVTGYS
                     LYNEAALSFADATGLGHVIIIGGADRAVAGKASAAVIYY"
     gene            5920..7749
                     /locus_tag="VFN38_09960"
     CDS             5920..7749
                     /locus_tag="VFN38_09960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012127.1"
                     /translation="MEPLALSPTQYRIVIGTLITAAAVGVVVFLSFAQGLFYALFADV
                     ASRAQAFREGVLGRSDRFLTERLAAFWTARESEPRAPMVSELSRLSGAIESVGEAQVH
                     AIVDAERRIGMHLNALRSIQQPEGADATTDRERLIESVGGTSLFSLGFLVLFTVAIGA
                     VNSFLLAIFFREVIGSYRVLPYPMPDLQASNLIALIIFVAEVTTGWAIYRSGDHQKAG
                     ERKTAAGAGFFAVIPWVMLAVLAIVELAAYSTLSLRVNLAQRLRLDAAGPVYPLAQYF
                     LAFLGIGLTLLLAYLGHAIAEGIAERRRSKLAREIIASLRKGKSNALAQVTQLRLPIE
                     RIRETATSFPTSISDDFIRQLGIVERRAPVLHVVEQFAVGVLAPLDRSATSAAAPADA
                     PPSYLRMARTRSQVWGDLILSAMLAVALLLAATLTASEVVSLLREVGTSSTTSHLIAW
                     SAGIGVPLVLIGLGAVGWNLARGLRYANPAAAALPERRGQAILWWAVVSATISATVAL
                     VAVALAVTYGRLPFLFGALAVLQAGALVCFAAFLDRGAVAILHLLYLAWLVATRVGAL
                     LLAAVASLAELLCFVLRIVVRLFAIPGDVLRGRMMEAKTWSVS"
     gene            7746..8594
                     /locus_tag="VFN38_09965"
     CDS             7746..8594
                     /locus_tag="VFN38_09965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012128.1"
                     /translation="MSGATRSGKVPVPVLVTLGIGAVLAVLVAWPPSQPRGGGRAPAA
                     QQDSTARPDTGAAVSPNLPAPEGQTDPPVGEFYYLVDISASTKDVNAASAFMEGIALL
                     QPIFGALREMKELSPQRHRVATIGAMSLQPAPRCDIHVAAQTLFSADDNPALATRAMG
                     ACERELRQLTPEQHTDISGALVNAGLSLQGKRKALRGVLLITDLEEDIQPGAVAGRPD
                     LRGMCVAVFTLVTPASARDPRLLNERSSEWTAKLRGWGAKNVYAVNARGIDATDLRGF
                     FQSCEG"
     gene            8655..9599
                     /locus_tag="VFN38_09970"
     CDS             8655..9599
                     /locus_tag="VFN38_09970"
                     /inference="COORDINATES: protein motif:HMM:NF013324.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="slipin family protein"
                     /protein_id="HET9012129.1"
                     /translation="MVMLPVPISNAVVPSGTRVNFLSVLVAAGVTAVGGLGLLLAGSV
                     GAVVAAAVTGLLLGTSPQVAQQWERAVVLRMGRFIGLRGPGLFWRIPFVDNVTAWVDQ
                     RVITTPFAAEETLTSDTVPVNVDAVLFWMVHDPEKAALEVQNYPAAVSWAAQTALRDI
                     IGRTSLAELLHGREKIEGELQELIDARCMPWGVAVQAVEMRDIIIPANLQDAMSREAQ
                     ATREKRARIILGEAEVDIAKLFEEASHVYQKNPTALQLRAMNILFEGIKQKGALMIVP
                     SDAVTTMGLGGMIGAAAMQGQVPAAPMGAGVIPGESGL"
BASE COUNT         1445 a         3489 c         3602 g         1415 t
ORIGIN      
        1 gggtcgacgg tcggccggtg cgcttggcga gcgcgtcggg gagaaagaga taacgaggtt
       61 cgtctcaacc tgcaaacatt agaatgtgct cataatcgga ttacgcgccg cgcgcaggta
      121 tatggacagt ccatccatcg agacggatgg gcgttcgccg aaccatgcgc ggctgccgga
      181 ccggggcact atctcccgca cgatacgcgt aacccaagtc gggagtttcc cgttggacct
      241 ccaccgcgcg gcgtcgccgt ccccgcaggg gccaaggccc tctatccgac ctccgagccg
      301 ggcgataaag tccggtcccg tcgcgcacct gccggccctc ccgcatctcc ctccggtcgc
      361 catgccactc catcgcacgc tcgccgccgc gctcaccgtc gcggtcgcgc ttcccgccgc
      421 cgcccagacg cggatgctgc gctcgccgag cgtgagccag cgccacatcg ccttcgccca
      481 cgccggcaac atctggatcg tcgagcggtc ggggggcgcg gcgcgtcggc tcaccagctt
      541 cgccggcgag gcctccaacc ccaagctctc ccccgacggg agccgcgtgg cgttcagcgc
      601 gcagtacgcc ggcaacgtgg acgtgtacgt ggtgcccgcc gaggggggcg agccgaatcg
      661 gctcaccttc caccccggcg ccgacatggt gcaagggtgg acgccggacg gctcggccat
      721 cgtcttcgcc agcgggcgcg cgaccgacgc ccccgtggcg gtgccgcgct tctatcaggt
      781 gaagctcgcc gggggaccgg agatcccgat gccgatgccc cgcgccttcc aggggaagat
      841 cagccccgac ggcaagcgca tcgcctaccg catgaacagc tcgtgggacg aggagcgccg
      901 caactaccgc ggcgggcaga atcgtcccat ctggatcgag gacctggcca gccacgaggt
      961 gaccaccgtt ccctggcagg actccaagga gatggacccc gcgtgggtgg gcgacgtcgt
     1021 gtacttcctc tccgaccgcg acggcgtctc caacgtgtgg agctacgaca cgcggacgaa
     1081 ggcgctcggc caggtcacga agttccgcga cttcgacgtg aagacgctcg acgcgtccac
     1141 ctcggccaac gccgtcgtgt tcgagcaggg gggctgggtg cacgagctcg accccgccac
     1201 gggacgcgag cgcacggtga gcatcgccgc caacggcgac ttcccatgga tgatgccgca
     1261 gtggaaggac gtcacccagc gcgtcgtgcg gctcgcgctg tcgcccaccg gcaagcgcgc
     1321 cgccgtggaa gcgcggggcg agatcttcac cgtgcccgcc gagaagggcg acgcgcgcaa
     1381 cctctcggcg tcgaacggca gcgccgagcg cgatcccgcc tggtcgcccg acgggaagtc
     1441 catctcctgg ttcagcgacg cgagcggcga gtacaagctc gtgatctcgt cgcaggacgg
     1501 cacgggcaag cgcgagatcg cgctgccgga gccgagccac ttctacacgc cgcagtggag
     1561 ccccgacgcg aagcgcatcc tgttccacga cacccacctg cggctctggg tggtggacgt
     1621 cgccagcggc cgggccaccc aggtggacac cgacccgttc atgatgccgg accgctcgct
     1681 gaacccgcgc ttcagccccg acgggcggtg gatcgcgtac tcgcgccggc tgccgtcgat
     1741 gttccgggcg atcttcgtct acgacgtgga gagcggccgg aagcagcagc tcaccgacgg
     1801 gctcgcggac gcgacgtcgc cggcgtggga cgccagcggg aagtacctct ggttcctggc
     1861 gagcaccaac ttcgggttga actcggggtg gctcgacatg acgtcgtacg accaccccac
     1921 cacctcggcg ctctacctcg ccgtgctgaa gaagggggag cccagcccgc tgctgccgga
     1981 gagcgacgag gagtcggccg ccgtggcggc ggcgcgcggc gattcggcgc gcgccgcggc
     2041 gcccgccggc ccgggtgaca gcgtgcgcac ggcgcgcgcg tcgcgccccg tggtcaccat
     2101 cgacctggac ggcatcgcgc agcgcatcgt cgccgtgccc tcgctggcgc agcgcgacta
     2161 ccgcgagctc gaggccggtg ccgcgggaac catcttctgg gtggagaaca cgccggccac
     2221 cggcaccgcc gagaccaccg gccccaccgg cggcgtgctg caccgctaca cgctgaagga
     2281 gcggaaggcg ctctccttcg cgagcaacgt cgtggactac gcggtgagcg ccgacgggaa
     2341 gaagctgctc tatcgcacgc ccggcgcggc ggggggtctg tacctcgtgg acgccgacaa
     2401 ggcgccgccc gcggcggccg ccggcaagct ggccatgcag ctgcggatgc tggtggaccc
     2461 gcgcgccgag ttcgcgcaga tcttcgacga agggtggcgc aaccagcgcg actacctgta
     2521 cgtgaagaac atgcacggca gcgactggcc ggcgatgaag aagatgtacg gcgcgctgct
     2581 gccgagcgtg aatcaccggg cggacctcaa ctacctgctc gacatgatgg gcgccgagct
     2641 ggcgatcggg cactcgttcg tgcgcggcgg cgacatcccc gaagtgcagc cgaccaccgc
     2701 cggcctgctc ggcgccgact tcacggtgga gaatggccgc taccgcatcg cgaaggtgta
     2761 cgacgccgaa tcgtggaacc cggacctgcg cgcgccgctg gccgcgcccg gggtggacgt
     2821 gcgggccggc gagtacctgc tgagcgtgaa cggcgtggag ctgcgcgggt ccgacaacgt
     2881 ctaccgcctg ctggacggga cggccaaccg gcagacggtg ttgcgcgtgt cgccgcgtcc
     2941 gtcgctcgac ggagcgcgca ccgtgacggt ggtgcccgtg ccgaacgacg cggggctccg
     3001 ctcgcgggcg tgggtggaga agagccgccg gctcgtggac tcgctgagcg ggggcacgct
     3061 ggcctacgtg tgggtgccga acacggggca gggcggctac cagtcgttca accggtacta
     3121 cttcgcccag cagcacaagc gcggcgccat catcgacgag cggtacaacg gcggcggctc
     3181 cgccgccgat tacatcatcg acctgctcgg gcgccagttc gacggctact tcaacaaccc
     3241 ggtgggcgac cgctatccct tcacctcgcc cgcggcgggg atctggggac cgcaggtgat
     3301 gatcatcaac gagatggccg gttcgggcgg cgacctgatg ccgtacatgt tccagcaccg
     3361 caggatcggg ccgctcgtgg gcaagcggac ctggggtggc ctggtgggca cgtgggacac
     3421 cccgcccttc gtggacggcg gggcgatgat cgcgccgcgc ggcggcttct tcgacctgaa
     3481 cggccggtgg gcggtggaga acgtgggcac gtcgccggac atcgacgtgg agaactggcc
     3541 gcgcgaggtg atcgcggggc gagacccgca gctcgagcgc gcggtggccg aggcgctgaa
     3601 gatggcgcgc gagaagccgc tggtgcgggc gacgaaggag ccgccggggg cgacgtgggg
     3661 ggagcggaag ccctgaaccg ctgaggacgc ggaggaccgg aggagcactc cttcgcgtcc
     3721 tccgcggcgt catccgtggt tcgcgagaac gcgggtcagt gcggcgtgtc cgtccgctcg
     3781 ctcctcgccg gcgacgccag ctcggcgcgc cgggccggcg tcgcctcgct gagcagcccc
     3841 accatgaacc gctgcgcctc cgagatccgc tccacctcga tggcgatcgt gtccaccgcg
     3901 gtctcgagcc gcagcatgcg gtcgtcgtcg tggcgcggcg ccagcgatga cggcttcgcg
     3961 tgcgagcccc agcgccacag gatgcggccg ccgaggccga tcgccacgaa gccggcggtg
     4021 gagagcacga gcacggtcat gacctgggcg aacatcagca cgtcgttgtc catcgtctcg
     4081 ctccggggtg atgaggaccg tacgacgagc gggacgggaa gttgcgcggg gcgcgtgtcg
     4141 cggcgttggt gatccgcgtc acacggcgcg gaaacagttg gtgacccggg ccgattcgct
     4201 gcagtcctcc tgatgagacc gtcgtcgtga gcgagcgcga gccgcgctcc cgcgacgcac
     4261 gaaacgagaa gttccctccc caggagtcgc tcacatatgt cgtccaccac ctcgcgccgc
     4321 ccgaaggggc ggttcgtcac gctcgccctc gcggccggcc tggccctcgc caccgcctgc
     4381 ggcggcgaca gcaccggacc ggagcagggc ccgccctcgc tcaccgtcgt gaacggggtc
     4441 ccccatccca ccggcctcgt ggggatgacc gtcgcgatcc agggggtgaa cctcggtgac
     4501 gcggccaacg gcaaggtgtt cttcaccccc accggcggca cccccatcca ggccaccatc
     4561 gccaacgcgg cggactggag cgacgccttc gtcgtcacca ccgtgccggc gggcatcacc
     4621 gccgacgcga acatcacggt gcagaccgcg gtcggcacca gcaaccccgt gcccttcacg
     4681 ctcgtctcga gcgccgcgtt cagccccagc accatcacct ggacccgcac cacagacctc
     4741 cccgtcgccc tccaggggct gggcgcggtg tacgtgcccg tgaccaccgg caccacgcat
     4801 cccagctacg tctacacggt gggcggcgcc gacgcggcga acgtcgccgt gacgacgatg
     4861 taccgcgcgc aggtgcagac gtccggcgcc ctcggcgcct ggagcacgat gaccccgctc
     4921 cccgcggcgc gcgcgtatca caccgtcgtc gcggccaccg cctacaccgc gccgctcgac
     4981 accaccacca ccgcggcgta cgtgtacgcc gtcggcggag tggacgccac cgcccagacg
     5041 gtgagctcgg tgtacgtcac gaaggtctcg cccgacggca ccgtgggcgc gtggcagtcc
     5101 accaccgccc tgccggccgc gctgcactcg gcggcgggtg cggtcttccg cggctacctg
     5161 tacctggtgg gcggcgccga caacgcgaac gcgccggtcg cgaccaccta tcgcgccgcg
     5221 gtgaaggccg acggcaccct gggcgcctgg gagacgctgg ccccgctgcc gcaggccacc
     5281 tcgcacctct cgctcaccca gttcggcccg tacctctacg ccgtgggcgg caacctcggc
     5341 accgtgaccc cggtgctgaa cacctccacc accaccgaat cggggatggt gtacgccgcg
     5401 acgatcaacc tgcgcgacgg gtcgctcggg tcggcgggct gggtcacgca gacctcgatg
     5461 accaaggcgc gcagcaagca ctccaccctc gccgccggtg gcgcgctcct caccagctcc
     5521 ggggtgtacg gcggcgcggc cggctccagc gagaacagct acgcgctgct caacgcgagc
     5581 ggcggggtgg gaagctggca gggcgcgacg ggggtgaaca ccatcgcctc ggtcaccggc
     5641 tactcgctct ataatgaagc ggcactctcc ttcgccgacg ccaccgggct cggccacgtg
     5701 atcatcatcg gcggcgccga ccgcgccgtc gcgggcaagg cctcggcggc ggtgatctac
     5761 tactagtctc cgcgcagcaa ccgcagggga cggggtcgtg gcgaagcacg ccacggcccc
     5821 gttcgcgctc gcggaccgac gccaggcagt gcccaccccg gcggcacttc cgcaccccgt
     5881 acccgggtgt agcttcgcgg cagagcatca ggaggcaccg tggaaccgct cgcactctct
     5941 ccgacgcagt accggatcgt gatcggcacg ctgatcaccg cggccgcggt cggcgtcgtc
     6001 gtcttcctct cgttcgcgca gggactcttc tacgcgctgt tcgccgacgt ggccagccgc
     6061 gcgcaggcct tccgggaagg agtgctcggc cggagcgatc gcttcctcac cgagcggctg
     6121 gcggcgttct ggacggcgcg cgagagtgag ccgcgtgcgc ccatggtctc ggagctgtcg
     6181 cggctgagcg gcgccatcga gtcggtgggc gaggcacagg tccacgccat cgtcgacgcc
     6241 gagcgtcgca tcggcatgca cctgaacgcg ctgcggagca tccagcagcc cgagggcgcg
     6301 gatgcgacca ccgaccgcga gcggctcatc gagtccgtcg gcggcacgtc gctgttcagc
     6361 ctcggcttcc tcgtgctgtt caccgtcgcc atcggcgcgg tgaactcctt cctgctcgcc
     6421 atcttcttcc gcgaggtgat cgggagctac cgcgtgcttc cgtatcccat gccggacctc
     6481 caggcgtcga acctcatcgc gctcatcatc ttcgtggccg aggtgacgac gggatgggcc
     6541 atctatcgga gcggcgatca tcagaaggcg ggcgagcgga agacggccgc cggcgccggc
     6601 ttcttcgccg tgatcccgtg ggtgatgctg gcggtgctcg ccatcgtcga gctggcggcg
     6661 tactccaccc tctcgctgcg ggtgaacctc gcgcagcggc tccggctcga cgcggccggc
     6721 ccggtctatc cgctcgccca gtacttcctc gccttcctcg gcatcgggct caccctgctc
     6781 ctcgcgtatc tcggccatgc gatcgccgag gggatcgccg agcggcggcg gtcgaagctg
     6841 gcgcgcgaga tcatcgcgtc gctgaggaag ggaaagagca acgcgctcgc ccaggtgacg
     6901 cagcttcgcc tgccgatcga gcggatcagg gagacggcga cgagcttccc gacgagcatc
     6961 tccgacgact tcatccgcca gctcggcatc gtcgagcgtc gcgcgcccgt gctgcacgtg
     7021 gtggagcagt tcgccgtggg ggtgctggcg ccgctcgacc ggagcgcgac gagcgccgcg
     7081 gccccggccg acgcgccgcc ctcgtatctc cgcatggcgc ggacgcgcag ccaggtgtgg
     7141 ggcgacctga tcctgtcggc gatgctggcc gtcgccctgc tgctcgccgc caccctcacc
     7201 gcgtccgagg tggtgtcgct gctgcgcgag gtggggacgt cgagcacgac gtcgcacctc
     7261 atcgcctggt cggcggggat cggcgtgccg ctcgtgctga tcgggctcgg cgcggtgggg
     7321 tggaacctgg cgcgcgggct gcgctacgcc aatcccgcgg ccgccgcgct gcccgagcgc
     7381 cgcgggcagg cgatcctctg gtgggccgtg gtgtccgcga ccatctcggc gacggtggcc
     7441 ctcgtcgccg tggcgctcgc ggtgacgtac ggccggctcc ccttcctgtt cggcgcgctc
     7501 gccgtcctcc aggccggcgc gctggtctgc ttcgccgcct tcctggaccg cggcgcggtg
     7561 gccatcctgc acctgctcta cctcgcgtgg ctggtggcga cgcgggtggg tgcgctgctg
     7621 ctggcggcgg tcgccagcct ggcggagctg ctgtgcttcg tgctgcggat cgtcgtgcgc
     7681 ctgttcgcca tccccggcga cgtgctgcgg ggccggatga tggaggcgaa gacatggagc
     7741 gtgtcatgag tggcgcaacg cggagtggca aggtgcccgt gcccgtgctg gtgacgctgg
     7801 gcatcggggc ggtgctcgcg gtgctggttg catggcctcc cagccagccc cgcggcggag
     7861 ggcgcgcgcc ggcggctcag caggattcca ccgcgcgccc ggacaccggc gcggccgtct
     7921 cgcccaacct gccggcaccg gaaggccaga cggatccgcc ggtgggggag ttctactacc
     7981 tggtggacat ctcggcgtcc accaaggacg tgaacgccgc gagcgccttc atggaaggga
     8041 tcgcgcttct gcagccgatc ttcggcgccc tgcgcgagat gaaggagctg tcgccgcagc
     8101 gccaccgcgt cgccaccatc ggcgcgatga gcctccagcc ggcgccgcgg tgcgacatcc
     8161 acgtcgcggc gcagaccctg ttcagcgcgg acgacaaccc ggcgctggcc acgcgcgcca
     8221 tgggcgcctg cgagcgcgag ctgcggcagc tcacccccga gcagcacacc gacatcagcg
     8281 gggcgctcgt gaatgccggg ctctccctcc aggggaagcg caaggcgctg cgcggcgtcc
     8341 tcctgatcac cgacctggag gaggacatcc agcccggcgc ggtggccggc cgccccgacc
     8401 tgcgcggcat gtgcgtcgcc gtcttcaccc tggtgacgcc ggcgtcggcg cgcgacccgc
     8461 ggctgctgaa cgagcgcagc tcggagtgga cggcgaagct gagggggtgg ggggcgaaga
     8521 acgtgtacgc ggtgaacgcg cgcgggatcg acgcgacgga cctgcggggg ttcttccagt
     8581 cgtgcgaggg gtgaggagcg cgtcgcccac ctgaagatgt ccgggatgcg gaaggttatc
     8641 gacggaggtg cccgatggtg atgcttcctg ttccgatatc gaacgccgtg gtgcccagcg
     8701 gcacgcgggt gaacttcctc tccgtgctcg tggccgccgg cgtcaccgcg gtgggcgggc
     8761 tcgggctgct gctcgccggg agcgtcggcg ccgtggtggc cgcggcggtg accgggctgc
     8821 tgctcggcac gtcgccgcag gtggcgcagc agtgggagcg cgccgtggtg ctgcggatgg
     8881 ggcggttcat cgggctgcgc gggccgggcc tgttctggcg gatcccgttc gtggacaacg
     8941 tgacggcgtg ggtggaccag cgcgtgatca cgaccccgtt cgcggcggag gagacgctga
     9001 cgtccgacac ggtgccggtg aacgtggacg cggtgctgtt ctggatggtg cacgacccgg
     9061 agaaggcggc gctggaggtg cagaactatc cggcggcggt gagctgggcg gcgcagacgg
     9121 cgctgcgcga catcatcggc cggacgtcgc tggcggagct gctgcacggg cgcgagaaga
     9181 tcgaggggga gctccaggag ctgatcgacg cgcgctgcat gccgtggggg gtggcggtgc
     9241 aggcggtgga gatgcgcgac atcatcatcc cggcgaatct ccaggacgcg atgtcgcgcg
     9301 aggcgcaggc gacgcgggag aagcgggcgc ggatcatcct cggcgaggcg gaggtggaca
     9361 tcgcgaagct gttcgaggag gcgtcgcacg tgtaccagaa gaacccgacg gcgctgcagc
     9421 tgcgggcgat gaacatcctg ttcgagggga tcaagcagaa gggggcgctg atgatcgtgc
     9481 cgagcgacgc ggtgacgacg atggggctcg gcgggatgat cggggcggcg gcgatgcagg
     9541 gtcaggtgcc ggcggcgccg atgggggcag gggtgatccc gggcgagtcg gggctctgag
     9601 cgctcctgcc gcggaggagg agcttcctgt cacagggcgc tgaaccacaa agcttttgac
     9661 cacagaggag cacggaggac tgccacggca ctcctccgtg ctcctctgtg tcctccgtgg
     9721 ttcgatgacc ttgcccttgc gatgtcgggc gcgtcgcgcg ttggccggtg tcgcgcgttg
     9781 gcgaggccgt cgcggcccct gctggcccca cagacccagg gatgtacgga tgctacggat
     9841 gaaacggaaa ctgccggata cggcctcggg ctcgtgcctg gcgcgcgatg ccggccccgc
     9901 agcgaagaag aaatgctgtt ggggtcgcgg ggctggctta ggcgcgggga g
//
LOCUS       DASSYW010000623         2029 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1804695, whole genome shotgun sequence.
ACCESSION   DASSYW010000623 DASSYW010000000
VERSION     DASSYW010000623.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2029
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1804695"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..500)
                     /locus_tag="VFN38_09975"
     CDS             complement(<1..500)
                     /locus_tag="VFN38_09975"
                     /inference="COORDINATES: protein motif:HMM:NF021505.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2231 domain-containing protein"
                     /protein_id="HET9012130.1"
                     /translation="MNIAHLHLALNHFPVVGSIIVALLFALALRRRSDELGRAALLLA
                     ALVGAVSIAVYFTGEPAEELIERLPGVSEAVTEQHEEAALVATLVVGALGALSAVVLG
                     MHRGHRALSRRTTGAALALALVACGAMGYTAFLGGQVRHTEIRSGATAARGGGAPVAA
                     ESDDDNR"
     gene            complement(589..1275)
                     /locus_tag="VFN38_09980"
     CDS             complement(589..1275)
                     /locus_tag="VFN38_09980"
                     /inference="COORDINATES: protein motif:HMM:TIGR01494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HET9012131.1"
                     /translation="MVEGRRVHVGSRRYVAAHAPAVGSGIPARDGDVGLRAFVAIDGR
                     LAAVMHFADTLRPDVAELLARLRELGIRRTVLLSGDHEATTRSVAERVGITEVRGDLL
                     PADKVAAVERLRGEREVVMMVGDGTNDAPALAAAHVGVALAGHGGGITSEAADVILLV
                     DRVDRIGDAVDIGRRTTRLARQSIWAGLVMSGIAMVFAGVGMIPPTAGAILQEAIDVA
                     VILNALRASR"
     gene            complement(1281..>2029)
                     /locus_tag="VFN38_09985"
     CDS             complement(1281..>2029)
                     /locus_tag="VFN38_09985"
                     /inference="COORDINATES: protein motif:HMM:TIGR01494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HET9012132.1"
                     /translation="EVDADDVGVDDVLLLRPGDLVPCDGVVVAGSSDVDASSLTGEST
                     PIAALPGVPLMSGSLNGAGSFTMRATSPARASQYARIVELVRSAQSTKAPLQRLAERY
                     AVWFTPLTALACVAAYAVSRDWTRVLAVLVVATPCPLILAPPVAIVAGINRAARRQII
                     VRTGAALEQLGAVTAVVFDKTGTLSVGKPALERVDAVNGLPEGDALRLAGALEQASSH
                     PLARVVARAAAERSGALPTPTLVLESAGQG"
BASE COUNT          278 a          784 c          730 g          237 t
ORIGIN      
        1 cgattgtcgt cgtccgattc ggcggcgacg ggagcgccgc cgccccgcgc cgcggtggcg
       61 ccggagcgaa tctccgtgtg gcggacctgt ccaccgagga acgccgtgta gcccatggcg
      121 ccgcaggcca cgagggcgag cgccagcgcg gcgccggtgg tgcggcgcga cagcgcgcga
      181 tgcccgcggt gcatgccgag caccacggcg gacaacgcgc cgagcgcgcc gacgacgagc
      241 gtcgccacca gcgccgcctc ctcgtgctgc tcggtcacgg cctccgacac gccgggcagc
      301 cgttcgatca gctcctcggc cggctcgccg gtgaagtaga ccgcgatcga gaccgcgccg
      361 acgagcgcgg cgagcagcag ggcggcgcgc ccgagctcgt cgctgcggcg acgcaacgcg
      421 agcgcgaaca gcagcgccac gatgatgctg ccgacgacgg ggaagtggtt cagggcgagg
      481 tgcagatgcg cgatgttcat ggcgtcactc cttcgtgcgg ttccggtgtg gcatcaacat
      541 cgcggccgga ggcgccgcgg tctgtccgcc gatccccttc acacggcgct agcggctggc
      601 gcgcagcgcg ttgaggatta ccgcgacgtc gatcgcctcc tggaggatgg ccccggccgt
      661 cggagggatc atcccgacac cggcgaagac catcgcgatg ccgctcatca cgagcccggc
      721 ccagatgctc tgccgggcga gccgcgtcgt gcgccgcccg atgtcgaccg cgtcgccgat
      781 gcgatccacc cgatcgacga gcaggatcac gtcggccgcc tcgctcgtga tgccgccgcc
      841 gtggccggcg agcgccacgc cgacgtgcgc ggccgccagt gccggcgcgt cgttggtccc
      901 gtcgccgacc atcatcacga cttcgcgctc gccgcggagc cgctccaccg cggccacctt
      961 gtccgccggc agcagatcgc cgcgcacctc cgtgatcccc acgcgctccg ccaccgaccg
     1021 cgtggtcgcc tcgtgatccc ccgacagcag cacggtgcgc cggatgccga gctcgcgcag
     1081 ccgcgccagc agctcggcga cgtcggggcg cagcgtgtcg gcgaagtgca tcaccgcggc
     1141 gagccggccg tcgatggcga cgaaggcgcg cagccccacg tcgccgtcgc gcgccgggat
     1201 gccgctcccg acggccggcg catgcgccgc gacgtagcgg cgactcccca cgtgcacgcg
     1261 gcgtccctcc accatgcccg tcacccctga ccggcggact ccagcaccag ggtcggcgtc
     1321 gggagcgcgc cgcttcgctc ggcggcggcc cgcgccacga cgcgcgcgag cggatgactc
     1381 gacgcctgtt ccagcgcccc cgcgaggcgc agcgcgtcgc cctccgggag cccgttcacg
     1441 gcgtccacgc gctccagcgc cggcttgccg accgacagcg tgcccgtctt gtcgaacacc
     1501 acggcggtga ccgcaccgag ctgctcgagc gcagcgcccg tgcgcacgat gatctgccgg
     1561 cgtgccgcgc ggttgatgcc cgcgacgatc gccaccggcg gcgcgaggat gagcgggcac
     1621 ggggtggcga cgacgagcac ggcgagcacc cgcgtccagt cgcggctcac cgcgtacgcg
     1681 gccacgcagg ccagcgcggt gagcggcgtg aaccagaccg cgtaccgttc cgcgaggcgc
     1741 tggagcggcg ccttggtgga ctgcgcgctc cgcacgagct ccacgatgcg cgcgtactgg
     1801 ctcgcccgcg ccggcgacgt ggcgcgcatg gtgaaggagc cggccccgtt cagcgacccg
     1861 ctcatgaggg gcacgcccgg aagggcggcg atcggcgtgg actcgccggt gagcgacgac
     1921 gcgtcgacgt cggacgaccc ggccacgacg acaccgtcgc agggcacgag gtcgcccgga
     1981 cgcaggagca gcacgtcgtc gacgcccacg tcgtccgcgt cgacctcct
//
LOCUS       DASSYW010000624         2301 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_906391, whole genome shotgun sequence.
ACCESSION   DASSYW010000624 DASSYW010000000
VERSION     DASSYW010000624.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2301)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2301)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2301
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_906391"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(9..1145)
                     /locus_tag="VFN38_09990"
     CDS             complement(9..1145)
                     /locus_tag="VFN38_09990"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: protein motif:HMM:NF004679.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004638 - phosphoribosylaminoimidazole
                     carboxylase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HET9012133.1"
                     /translation="MIVPGSVLGVLGSGQLGRMFTIAARRMGYRVHTFSPDSDTPTGQ
                     VADVEVTAPYDDLDALRAFAHRVAVVTFEFENVPSAATNAIESIVPVRPSPEALHVSQ
                     QRAREKQFLKDRGFPTVPFAVVASQGELASALSRIGTPAIVKTAESGYDGKGQQVAAS
                     ADQAQRIWTSLGAHVLVVEKRISLQAELSVIAARGLDGQVAQFPLFENRHRNHILDLT
                     TAPALVPPDVAARATEVAHGILDALEYVGVLCIEFFLSTDGELMVNELAPRPHNSGHL
                     TFDAAVTSQFEQQVRAICGLPLGSPELLRPAAMANLLGDLWADGEPNWEAACRLPEVK
                     LHLYGKVMPKPGRKMGHLTAIGRTVHEAQERVISARDALLGQTS"
     gene            complement(1142..1633)
                     /gene="purE"
                     /locus_tag="VFN38_09995"
     CDS             complement(1142..1633)
                     /gene="purE"
                     /locus_tag="VFN38_09995"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: protein motif:HMM:TIGR01162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009320 - phosphoribosylaminoimidazole
                     carboxylase complex [Evidence IEA];
                     GO_function: GO:0004638 - phosphoribosylaminoimidazole
                     carboxylase activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HET9012134.1"
                     /translation="MPEQKPLVAVIMGSTSDWETMKHAVEVLEKFGVPQEHHVVSAHR
                     TPVWMAEFASGAEARGIEVIIAGAGGAAHLPGMVAAHTVVPVLGVPVQSAALQGLDSL
                     LSIVQMPGGVPVGALAIGKAGATNAGLLAVSILSNSRPELRAKLRAFREEQTQKVRHD
                     QLP"
     gene            1692..2297
                     /locus_tag="VFN38_10000"
     CDS             1692..2297
                     /locus_tag="VFN38_10000"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HET9012135.1"
                     /translation="MNHASYRAAGLLLLALGVALPAHAQDERKSEVSGGYQLLTLHEG
                     EVEETLGTGWYADVAGNFGPIFAVVVQVGGNYKSYGQDETINGFRAVVDAQLKVHTYL
                     AGVRVGPRQARISPYAEFLIGGATASVDVSSTVTSNGQTIFSDSSSESGTDVAMQFGG
                     GVTIWLSRRVGVRGAVSYLRVWGDDDEANAVRVAGGVTFGF"
BASE COUNT          368 a          796 c          780 g          357 t
ORIGIN      
        1 tcctccgttc aagacgtctg gcccagcagc gcgtcgcggg ccgagatcac gcgctcctgt
       61 gcttcgtgca ccgtgcgccc gatggccgtg aggtggccca tctttcgtcc cggcttcggc
      121 atgaccttgc cgtacagatg cagcttcacc tcgggcaggc ggcacgcggc ttcccaattc
      181 ggttctccgt cggcccagag atcgccgagc aggttggcca tcgccgccgg ccgcagcagc
      241 tccggcgacc cgagcggcag gccgcagatg gcgcgcacct gctgttcgaa ctggctggtg
      301 acggcggcgt cgaacgtcag gtgccccgag ttgtgcggcc gcggcgccag ctcgttcacc
      361 atcagctcgc cgtcggtgct gaggaagaac tcgatgcaca gcacgccgac gtactcgagc
      421 gcgtcgagga tgccgtgcgc gacctcggtg gcgcgcgccg ccacgtcggg gggcaccagc
      481 gcgggcgcgg tggtgaggtc gaggatgtga ttgcggtggc ggttctcgaa gagcgggaac
      541 tgcgccactt gcccgtcgag cccgcgcgcc gcgatcaccg acagttccgc ctgcaggctg
      601 atgcgcttct cgaccacgag cacgtgcgcg ccaagtgacg tccagatgcg ctgggcctgg
      661 tcggccgacg ccgccacctg ctgccccttg ccgtcgtagc ccgactcggc cgtcttcacg
      721 atcgcgggcg tgccgatgcg cgacagcgcg gacgcgagct cgccctgcga cgcgaccacg
      781 gcgaacggca cggtgggaaa gccacgatcc ttcaggaact gcttctcgcg cgcccgctgc
      841 tgcgacacgt gcagcgcctc gggcgacggc cgcaccggaa cgatcgactc gatggcgttc
      901 gtcgcggcgc tcggcacgtt ctcgaactcg aaggtgacca cggccacgcg gtgcgcgaac
      961 gcccgcaacg cgtcgagatc gtcgtagggc gccgtgacct cgacgtcggc cacttgacca
     1021 gtaggcgtgt cggagtcggg cgagaaggtg tggacgcggt agcccatgcg ccgcgccgca
     1081 atcgtgaaca tgcgcccgag ctgcccgctt ccgagcaccc cgagtaccga tcctgggacg
     1141 atcatggaag ctggtcgtgc ctgaccttct gcgtctgctc ctcgcggaac gcgcgcagct
     1201 tcgcgcgcaa ctccggccgc gagttcgaca ggatggacac cgccagcagt ccggcgttcg
     1261 tggcgcccgc cttgccgatc gcaagggcgc cgacgggcac gccgcccggc atctgcacga
     1321 tggacagcag cgagtcgagc ccctgcaacg ccgcgctctg caccggcacc ccgagcaccg
     1381 gcacgaccgt gtgcgccgcc accatgcccg gcagatgcgc cgccccgccc gcgccggcaa
     1441 tgatcacctc gatgccgcgc gcctcggcac cgctggcaaa ctcggccatc cacaccggcg
     1501 tccggtgggc tgacaccacg tgatgctcct gcggcacgcc aaacttctcg aggacctcga
     1561 cggcatgctt catggtttcc caatcggacg tggaacccat gatcacggcg acaagcggct
     1621 tctgctcagg catcggaaac agggaatgtt accttgcccc cacccgttca agccaacaaa
     1681 ggagagtctc catgaaccac gcgtcgtatc gggctgccgg cctcctgctc ctcgcgttgg
     1741 gcgtcgccct tccggctcac gcacaggacg aacgcaagtc ggaagtctcg ggtggctatc
     1801 agctgctgac gctccacgaa ggggaggtgg aggagacact gggcacggga tggtacgcgg
     1861 acgtggccgg caacttcggc ccgatcttcg cggtggtcgt tcaggtgggc ggcaattaca
     1921 agtcgtacgg gcaggacgaa acgatcaacg gcttccgcgc ggtggtggac gcccaactga
     1981 aagtgcacac ctaccttgcg ggtgtacgcg tgggcccacg gcaggccagg atctcgccct
     2041 atgcggagtt cctgatcggc ggcgcgaccg catccgtcga cgtgtccagc acggtcacga
     2101 gcaacgggca gacaatcttc tcggacagca gcagcgagtc gggcaccgac gtcgccatgc
     2161 agttcggcgg cggcgtgacg atctggttga gcaggcgggt gggcgtccgc ggggcggtca
     2221 gctacctgcg ggtgtggggc gacgatgacg aggcgaacgc ggtccgcgtg gccggaggcg
     2281 ttaccttcgg cttttgaacc c
//
LOCUS       DASSYW010000625         3139 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_279047, whole genome shotgun sequence.
ACCESSION   DASSYW010000625 DASSYW010000000
VERSION     DASSYW010000625.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3139)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3139)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3139
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_279047"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1131)
                     /locus_tag="VFN38_10005"
     CDS             complement(<1..1131)
                     /locus_tag="VFN38_10005"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HET9012136.1"
                     /translation="MSEGAPGDDTTPAGRRAARWRWTRRLVAGALLVAAPAVAAAQVT
                     PPRPTPERAITLQDAIAIALAQNSLIRFARNNAALDSLNVRQARNAFLPNLGASSSTS
                     QGFGAGSQGENSFSLSAGLSSAVTLFNGGQNTNALRQARLNLQASGQDLDRSRQTVVF
                     VIASDFLALITQQEQLRVQQENLSAQEQELAQLEQFVRAGTRPIGDLYQQQAAVAATR
                     LAVVSARRATEVAKVNLIQELLLDPRLDYTFVTPTTVGAGTSPAFNLDSLISVALARR
                     VDIQAQALRVQAAEREIRIAEGGRLPLVTGSAGYGSGYNSASDGGFLAQLDQRRGGSL
                     GVGVSVPIFDRGAVSIARQRAQIQLENQRIVLRDQQQTVALEV"
     gene            complement(1124..2338)
                     /locus_tag="VFN38_10010"
     CDS             complement(1124..2338)
                     /locus_tag="VFN38_10010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HET9012137.1"
                     /translation="MTQKTLLKLAWQSILKNKMRTVLTMLGIVIGVGSVIVMVAVGHG
                     AQSQIQKQISSLGTNLILVLPGASQQGGVSQGAGTFNRITVEDAQKLKLEGTMLAGVS
                     PVIFARQVVIGPAGNWRTMINGVSADYFAIRDWPVTSGDLFTESDVRSGRKIALIGAT
                     VAANLFPGVDPVGSQIQIGRVPFTVAGVLSPKGQNANGNDQDDVIVMPYTTAQNRLSG
                     NTRIGQIMMSTFSPGDIPAATQEITTIMRAAHKLGDNADDFTVRNQTEIASAATATTS
                     VMSGLLAAIASVSLVVGGIGIMNIMLVSVTERTREIGIRMAIGARGSDVMTQFLVESV
                     VMSLLGGVLGLIVGVGGSMLLGRLTGWATSVPGYALVIAVGFSAAVGVFFGFYPARKA
                     AGLNPIQALRYE"
     gene            complement(2335..>3139)
                     /locus_tag="VFN38_10015"
     CDS             complement(2335..>3139)
                     /locus_tag="VFN38_10015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HET9012138.1"
                     /translation="PPPAAAAVRPVIDVKGVTKVYSMGETRVYALRGVDLQVMPGDMI
                     AIIGASGSGKSTLMNILGCLDVPTSGSYVLDGVRVDGLNRNELADLRNQKLGFVFQGF
                     NLLARTSAIENVELPLLYDRSHRWGNTREVAAAALDRVGLGDRLDHHPSELSGGQQQR
                     VAIARALVTQPTLLLADEPTGNLDSHMTVEVMALFQELNAQGITVMLVTHEHDVANYA
                     KRIIDVRDGHIIRDHQVEQRGDAAADLKALRESEPDEEPPFVATPREGA"
BASE COUNT          428 a         1156 c         1049 g          506 t
ORIGIN      
        1 cacctccagc gccaccgtct gctgctggtc gcgcaggacg atccgctggt tctccagctg
       61 gatctgcgcg cgctgtcgcg cgatggacac cgcgccgcgg tcgaagatcg gcaccgacac
      121 tccgacgccg agcgagccgc cgcggcgctg gtcgagctgc gccaggaacc cgccgtcgct
      181 cgcgctgttg tagccgctgc catatcccgc gctccccgtc accaggggca ggcgcccccc
      241 ctcggcgatc cggatctcgc gttccgccgc ctgcacccgc agcgcctgcg cctggatgtc
      301 cacccgccgc gcgagcgcca ccgagatcag gctgtccagg ttgaacgcgg gcgacgtccc
      361 cgctcccacc gtcgtcggcg tcacgaaggt gtagtccagg cgcggatcga gcagcagctc
      421 ctggatgagg ttcaccttgg ccacctcggt ggcgcgacgc gcgctcacca ccgccagccg
      481 cgtcgccgcc acggcggcct gctgctggta caggtcgcca atcggccgcg tgcccgcccg
      541 cacgaactgc tcgagttgcg ccagctcctg ctcctgcgcg ctcaggttct cctgctgcac
      601 gcgcagctgc tcctgctggg tgatcagggc caggaagtcc gaggcgatga cgaacaccac
      661 cgtctgccgg ctgcggtcga gatcctggcc gctggcctgg aggttgagcc gcgcctgccg
      721 cagggcgttg gtgttctgcc ctccgttgaa cagcgtcacc gcgctcgaga ggccggcgct
      781 cagggagaac gagttctccc cctgcgagcc ggcgccgaac ccctgcgacg tggagctgct
      841 cgcgccgagg ttgggcagga aggcgttgcg ggcctgccgg acgttcaggg agtccagcgc
      901 ggcgttgttg cgcgcgaacc ggatcaggct gttctgcgcg agggcgatgg cgatggcgtc
      961 ctgcagcgtg atggcccgct cgggcgtggg gcgcggcggc gtcacctggg ccgcggccac
     1021 cgccggcgcg gccacgagca gggcgcccgc gacgaggcgg cgcgtccacc gccagcgcgc
     1081 cgctcgtcgc cccgccggcg tcgtgtcgtc ccccggcgcg ccctcactca tatcgcagcg
     1141 cctggatggg gttcagcccc gccgccttgc gcgccggata gaagccgaag aacacgccga
     1201 cggcggcgga aaagccgacg gcgatcacca gcgcgtagcc cggcaccgag gtcgcccatc
     1261 cggtgagccg gccgaggagc atcgagcccc ccacccccac gatcagcccg agcacgccgc
     1321 cgaggaggct catcaccacg ctctccacga ggaactgcgt catcacgtcc gacccgcgcg
     1381 cgccgatggc catgcggatc ccgatctcgc gggtgcgctc cgtgaccgac accagcatga
     1441 tgttcatgat gccgatgccc ccgacgacga gcgacaccga cgcgatcgcc gcgaggagac
     1501 ccgacatcac cgaggtcgtg gccgtcgccg cgctcgcgat ctccgtctgg ttgcgcacgg
     1561 tgaagtcgtc ggcgttgtca cccagcttgt gcgcggcgcg catgatcgtc gtgatctcct
     1621 gggtggcggc gggaatgtcg cccggcgaga aggtgctcat catgatctgg ccgatgcgcg
     1681 tgttgccgct caggcggttc tgcgcggtgg tgtacggcat cacgatcacg tcgtcctggt
     1741 cgttgccgtt ggcgttctgt cccttggggg agagcacgcc cgccaccgtg aagggcaccc
     1801 gcccgatctg gatctgcgag cccaccggat ccacgccggg aaagaggttg gccgccaccg
     1861 tggcgccgat gagcgcgatc ttgcgcccgg agcgcacgtc cgactcggtg aacaggtcgc
     1921 ccgacgtcac cggccagtcg cggatggcga agtagtcggc ggacacgccg ttgatcatcg
     1981 ttcgccagtt gcccgctggt ccgatcacca cctgtcgcgc gaagatcacc ggcgacaccc
     2041 cggcgagcat cgtcccctcg agcttcagct tctgcgcgtc ctccaccgtg atccggttga
     2101 aggtgccggc cccctggctc accccgccct gctggctggc gccgggcagc acgaggatga
     2161 ggttcgtgcc gaggctgctg atctgcttct ggatctggct ctgcgcgccg tggccgacgg
     2221 cgaccatcac gatcaccgac cccacgccga tcacgatgcc gagcatcgtg agcaccgtgc
     2281 gcatcttgtt cttcaggatg ctctgccacg ccagcttgag cagcgtcttc tgggtcatgc
     2341 tccctccctg ggcgtcgcca cgaagggcgg ctcctcgtcc ggttcactct cgcgcagcgc
     2401 cttgaggtcg gccgccgcgt cgccccgctg ctccacctga tggtcgcgga tgatgtggcc
     2461 gtcgcgcacg tcgatgatgc gcttcgcgta gttcgccacg tcgtgctcgt gcgtcaccag
     2521 catcacggtg atcccctgcg cgttcagctc ctggaacagc gccatcacct ccacggtcat
     2581 gtggctgtcg aggttgcccg tcggctcgtc ggccagcagc agggtgggct gggtgaccag
     2641 cgcgcgcgcg atggccacgc gctgctgctg gcctccactc agctcgctcg gatgatggtc
     2701 gagccggtcg ccgagtccca cgcggtcgag cgccgcggcc gccacttccc tggtgttgcc
     2761 ccagcggtgg ctgcggtcgt acagcagcgg cagctccacg ttctcgatgg cgctcgtgcg
     2821 cgccaggagg ttgaacccct ggaacacgaa ccccagcttc tggttgcgaa ggtcggccag
     2881 ctcgttgcgg ttcaggccgt ccacccgcac gccgtccagc acgtagctgc cgctggtcgg
     2941 cacgtccagg cagccgagga tgttcatgag cgtggacttc ccggagcccg acgcgccgat
     3001 gatcgcgatc atgtcgccgg gcatcacctg caggtccacg ccgcgaaggg cgtacaccct
     3061 ggtctcgccc atcgagtaga ccttcgtcac ccccttcacg tcgatcacgg gccggaccgc
     3121 cgccgcggca ggcggcggc
//
LOCUS       DASSYW010000626         3215 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1504906, whole genome shotgun sequence.
ACCESSION   DASSYW010000626 DASSYW010000000
VERSION     DASSYW010000626.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3215)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3215)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3215
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1504906"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..887
                     /locus_tag="VFN38_10020"
     CDS             <1..887
                     /locus_tag="VFN38_10020"
                     /inference="COORDINATES: protein motif:HMM:NF012993.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HET9012139.1"
                     /translation="PGDGRAARRAGPGDAAIAFGGIGQVTARPFRAAAVQMVSGGDVE
                     ANLAQAAALVATAAGEGAELVLLPEYFGILGARATDKVRAAERDGSGPQQAFLAQQAR
                     AHRIVLIGGSVPIASADPSRVRSACLAYGPDGTRLARYDKIHLFRFAQGDEAYDETLT
                     IERGDTRVAFDAPFGRIGLTICYDVRFPELYRALGDCTVVCVPAAFTWITGSAHWHLL
                     LRTRAVENQAWVLAAAQGGTHANGRRTFGHSCLVDPWGEVVAERADDGPGVIVGTVDP
                     ARTAEVRARLPAHAHRVM"
     gene            complement(1016..1549)
                     /locus_tag="VFN38_10025"
     CDS             complement(1016..1549)
                     /locus_tag="VFN38_10025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012140.1"
                     /translation="MLRVAAAVALVALALPAHALDAFPASHTLTFDGKRLVQAADGTT
                     EVERWREFVPAGESIDRWKTLASIREYPTHRDVKALAGELVRALKRRYPDAPSSVIEN
                     PSTGEVIVDFIVWPPDRAFTEFNLFRYGRRDGGGVVAQQFALRAYGDATDFLRGLKAE
                     RVRLLDLMAKEGLRAAR"
     gene            complement(1549..2238)
                     /locus_tag="VFN38_10030"
     CDS             complement(1549..2238)
                     /locus_tag="VFN38_10030"
                     /inference="COORDINATES: protein motif:HMM:NF013844.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Smr/MutS family protein"
                     /protein_id="HET9012141.1"
                     /translation="MAKLTDLKALLETRRASAPAAETPPSAKPGRHDDARPREVPARR
                     AVAASKHAEGDVDIKAAFADVAPIKRANKARVHAAPPAPVPRHRIADEEDALAASKYG
                     AEPAPHAWDIGQEHEGEQTFLRAGLGTDVLAKLRRSHWTVQAELDLHGHDSDEAHDAL
                     ADFLDEARGAGMRCVRVIHGKGLTSPNREPVLKGKVRRWLARWDDVLAYCEAPRHAGG
                     GGAVIVLLRGR"
     gene            complement(2347..>3215)
                     /locus_tag="VFN38_10035"
     CDS             complement(2347..>3215)
                     /locus_tag="VFN38_10035"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HET9012142.1"
                     /translation="DNWPADAEGVQGPDLMARFQKHAERFDTEVIFDQINDVDLSQRP
                     FTLRGDDGVYTCDALIVATGASARYLGLPSESQFMGKGVSACATCDGFFYKNRDVVVV
                     GGGNTAVEEALYLSNIAKSVTVVHRREKFRAEAILVDRLMAKTTGGNVRVIWDHVVDE
                     VLGDESGVTGVRLRPRDGGETVDVQAHGLFVAIGHTPNTQIFEHKLAMKGGYIKVKSG
                     TEGDATATSVAGVFAAGDVADHVYRQAVTSAGTGCMAALDAEAFLESVAEHRVPAEAG
                     AQIAAPAALAAR"
BASE COUNT          404 a         1187 c         1161 g          463 t
ORIGIN      
        1 accccggcga cggtcgcgcc gcccgccgcg ccggtcccgg cgacgccgcc atcgccttcg
       61 gtgggatcgg ccaagtgacg gcgcggccgt ttcgcgctgc cgccgtgcag atggtgtccg
      121 gcggagacgt cgaggcgaac ctcgcgcagg ccgcggcgct ggtcgcgacg gccgcgggcg
      181 agggcgccga gctcgtgttg ctgcccgagt acttcggcat cctgggcgcc cgcgcgaccg
      241 acaaggtgcg cgccgccgag cgcgacggca gcggtccgca gcaggcgttc ctcgcccagc
      301 aggcgcgcgc gcatcggatc gtgctgatcg ggggcagcgt cccgatcgcg tcggcggatc
      361 cgtcgcgcgt gcgcagcgcc tgcctcgcgt acggtccgga cggaacgcgc ctcgcgcgtt
      421 acgacaagat ccatctgttc cgcttcgcgc aaggcgacga ggcctacgac gagaccctca
      481 cgatcgagcg cggcgacacg cgggtcgcgt tcgacgcgcc cttcggccgc atcgggctca
      541 cgatctgcta cgacgtgcgc ttcccggagc tctaccgcgc gctcggcgat tgcacggtgg
      601 tatgcgtgcc cgcggcgttc acctggatca ccggcagcgc gcactggcac ctgttgctgc
      661 gcacgcgcgc cgtcgagaac caggcatggg tgctcgccgc cgcgcagggc ggaacgcacg
      721 cgaacggccg ccgcacgttc gggcactcct gcctcgtcga tccctggggc gaggtcgtcg
      781 ccgagcgcgc ggacgacggt ccgggcgtga tcgtcggcac cgtcgatccg gcgcgcaccg
      841 cggaagtgcg cgcgaggctg ccggcgcatg cgcaccgcgt gatgtgagcg gactgggccg
      901 gcggatcgcg agccggccgc acgcctcgct gggggtcacc cctcgctggc gtcacagcgc
      961 ggtcggatcg cacggcgctc tcgcgcctcg ggggtccgga tccaacgccg gacgttcaac
     1021 gcgccgcccg caacccttcc ttcgccatca ggtcgaggag gcgcacgcgt tccgccttga
     1081 gcccgcgcag gaagtcggtc gcgtcgccgt acgcacgcaa cgcgaactgc tgcgcgacca
     1141 cgccgccgcc gtcccgcctg ccgtagcgga acaggttgaa ctcggtgaac gcacggtcgg
     1201 gcggccacac gatgaagtcg acgatgacct cgccggtcga cgggttctcg atgaccgacg
     1261 acggcgcgtc cggatagcgc cgcttcaacg cccgcaccag ctcgccggcc agcgccttga
     1321 cgtcgcgatg cgtcgggtac tcgcgtatcg acgcgagcgt cttccagcgg tcgatcgact
     1381 ctcccgccgg cacgaactcg cgccagcgtt cgacctcggt cgttccgtcg gccgcctgca
     1441 cgagccgctt gccgtcgaag gtcagcgtgt gcgacgccgg gaaggcgtcg agcgcgtgcg
     1501 cgggcagtgc aagcgccacc agcgcgacgg ctgcggcgac gcgcagcatc accgcccgcg
     1561 cagcagcacg atcaccgcgc cgccgccccc cgcgtggcgc ggcgcctcgc agtaggcgag
     1621 cacgtcgtcc cagcgggcaa gccagcggcg gaccttgccc ttcagcaccg gctcgcggtt
     1681 cggcgacgtg agccccttgc cgtggatcac gcgaacgcag cgcattcccg cgccgcgggc
     1741 ttcgtcgagg aaatcggcga gcgcgtcgtg cgcctcgtcg gagtcgtgcc cgtgcaggtc
     1801 gagctccgcc tgcaccgtcc agtggctgcg acgaagcttc gccagcacgt cggtgccgag
     1861 ccccgcgcgc aggaacgtct gctcgccctc gtgctcctgg ccgatgtccc aggcgtgcgg
     1921 cgccggctcg gcgccgtact tcgacgccgc gagcgcgtcc tcctcgtcgg cgatgcgatg
     1981 gcgcggcacc ggggcgggcg gcgccgcatg gacgcgagcc ttgttcgcgc gcttgatcgg
     2041 cgcgacatcg gcgaacgccg ccttgatgtc gacgtcgccc tcggcgtgct tcgaggcggc
     2101 gaccgcgcgg cgcgcgggca cctcgcgcgg ccgcgcgtcg tcgtgccggc cgggcttcgc
     2161 cgaaggcggc gtttcagccg cgggggccga tgcgcgcctg gtctcgagca acgccttgag
     2221 gtcggtgagc ttcgccatcg ctgggccttc cggtggagtt ggcgtcaccc ggacgctggc
     2281 gacccctggg tcgtcttccg gcggaatcgg gccggcgcgc gccgcgacac cgctgccggc
     2341 gcgcgctcag cgcgcggcga gggccgcggg agcggcgatc tgcgcgccgg cctcggccgg
     2401 gacgcgatgc tcggcgaccg actcgaggaa cgcctcggcg tcgagggcgg ccatgcagcc
     2461 ggtgcccgcc gacgtcacgg cctgccggta cacgtggtcg gcgacgtcgc ccgcggcgaa
     2521 gacgcccgct acgctggtcg cggtggcgtc gccctcggtg ccgctcttga ccttgatgta
     2581 gccgcccttc atcgcgagct tgtgctcgaa gatctgcgtg ttgggcgtgt ggccgatggc
     2641 gacgaagagg ccgtgcgcct ggacgtccac cgtctcgccg ccgtcgcgcg gccggagccg
     2701 cacgcccgtg acgcccgact cgtcgccgag cacctcgtcg accacgtggt cccagatgac
     2761 gcgcacgttg ccgcccgtgg tcttcgccat cagccggtcc acgaggatcg cctcggcgcg
     2821 gaacttctcg cgccggtgca cgacggtgac gcttttcgcg atgttcgaca ggtagagcgc
     2881 ttcctcgacg gcggtattgc cgccgccgac caccaccacg tcccggttct tgtagaagaa
     2941 gccgtcgcag gtcgcgcagg ccgacacgcc cttgcccatg aactgggact ccgagggcag
     3001 cccgaggtag cgcgccgagg cgccggtcgc cacgatgagc gcgtcgcagg tgtagacgcc
     3061 gtcgtcgccg cgcagcgtga acggacgctg cgagaggtcg acgtcgttga tctggtcgaa
     3121 gatgacctcg gtgtcgaacc gctcggcgtg cttctggaag cgcgccatca ggtccgggcc
     3181 ttgcacgcct tcggcgtcgg cgggccagtt gtcca
//
LOCUS       DASSYW010000627         2715 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1209966, whole genome shotgun sequence.
ACCESSION   DASSYW010000627 DASSYW010000000
VERSION     DASSYW010000627.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2715)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2715)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2715
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1209966"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..578)
                     /locus_tag="VFN38_10040"
     CDS             complement(<1..578)
                     /locus_tag="VFN38_10040"
                     /inference="COORDINATES: protein motif:HMM:NF015094.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AarF/UbiB family protein"
                     /protein_id="HET9012143.1"
                     /translation="MLELMRDGPPPGLLRRIAATVRHAAGLLVGALVARANASGRRGT
                     RAGVRNAVERLLAALLRPLLRRELRDAPFPVQLRRRLELLGPTYIKLGQILSLREDIL
                     PRAVTTELRHLLNQLPVVPFPRFCDLVVADLGRPLDLMFARVDPVPLGSASIAQIHRA
                     RTIEGDEVVLKVVKPGVRETLRRDSRLLRGLGA"
     gene            complement(683..1870)
                     /locus_tag="VFN38_10045"
     CDS             complement(683..1870)
                     /locus_tag="VFN38_10045"
                     /inference="COORDINATES: protein motif:HMM:NF012588.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylglutaryl-CoA reductase"
                     /protein_id="HET9012144.1"
                     /translation="MQATMMAEGVPYQKDIVRDHSLDAASVRQRFVEECACVTLHHVT
                     HFSIDPTSTLGNIESFTGVAQVPLAFAGPLTVHGEHAMGEFLIPLATTEGSLVASYNR
                     GIKLLNAAGGVICTVSADRMQRAPVFIFDSARDARDFAVWVQEKVADIRQVAEATSHV
                     AKLQRIESYLASRFAFLRLDYTTGDAGGQNMVGRATLAACEWIAANNPAVRSYFLDSQ
                     LSSDKKVSYINMLRTRGKRVTAEATIPRSLLVEQMHVEPRTLAFWAGVGSVGSHLAGA
                     MNNGLHAVNALAAMFIATGQDVANVAEGSAATGYLEVTPAGDLYVAITLPSLIVATHG
                     GGTHLGTQRECLEVMGCYGEGKVHKLAEIIAGVALAGELSLAAAICTKEWVLAHEKFG
                     RNR"
     gene            2002..>2715
                     /locus_tag="VFN38_10050"
     CDS             2002..>2715
                     /locus_tag="VFN38_10050"
                     /inference="COORDINATES: protein motif:HMM:NF019605.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HET9012145.1"
                     /translation="MDTVLFTGFPGFLGSELLPRVLTRMRDAAAVCLVQPKYAPLART
                     RLDELVARSPDLAGRVRIVEGDIVLPDLGLGAATELASSVVEIFHLAAVYDLSVGRAL
                     AMRVNVDGTTHMLAFAARCPRLRRFQYVSTCYVSGRFPGTFTEDMLEEGQTFNNFYEE
                     TKYLAEVEVRRAMREGLPATIYRPAVVVGDSTTGTTQKYDGPYFAMQWLLRQPKVALM
                     PVVGNARATRFNVVPRNFVV"
BASE COUNT          396 a         1000 c          908 g          411 t
ORIGIN      
        1 gcgccaaggc cccgcagcag gcgcgaatcg cgccgcagcg tctcgcgcac gccgggcttc
       61 actaccttga gcaccacctc gtcgccctcg atcgtgcggg cgcggtggat ctgggcgatc
      121 gacgcggagc cgagggggac gggatcgacc cgggcgaaca tcaggtcgag gggccggccg
      181 agatccgcga ccacgaggtc gcagaagcgc gggaagggca ccaccgggag ctggttgagc
      241 agatggcgca gctccgtcgt caccgcgcgc gggaggatgt cctcgcgcag gctcaggatc
      301 tggccgagct tgatgtacgt cggccccagc agctccagcc gccggcgcag ttgcaccgga
      361 aagggcgcgt cgcgcagctc gcgacgcagg agcgggcgga gaagcgccgc gagcagacgt
      421 tccacggcgt ttcgcacgcc ggcacgtgtt ccacgccgcc cggatgcgtt cgctctcgcg
      481 acgagcgccc ccaccagcag gccggccgca tggcgcacgg tggcggcgat tcgccgcagc
      541 agtccgggcg gcggcccgtc gcgcatcagc tcgagcacgg gagcggccgt cgcgcgcgcg
      601 cctcgtcgcg cgcgtgatct cggcttgcga ggcggtcgag ccgacgggcc gtccgccttc
      661 ggcgtctccg cgcgcatccg catcagcgat tgcggccgaa cttctcgtgc gccaggaccc
      721 actccttcgt gcagatggcc gccgcgagcg acagctcgcc cgcgagcgcc acgccggcga
      781 tgatctccgc cagcttgtgc accttgccct cgccgtagca ccccatcacc tccaggcatt
      841 cgcgctgcgt gccgaggtgc gttcccccgc cgtgcgtcgc cacgatgagc gacggcagcg
      901 tgatcgccac gtacaggtcg cccgccggtg tcacttccag gtagccggtg gccgccgagc
      961 cttccgccac gttcgccacg tcctgccccg tggcgatgaa catcgccgcc agcgcgttca
     1021 ccgcgtggag gccgttgttc atcgcgccgg ccaggtgcga gcccacgctc cccacccccg
     1081 cccagaacgc gagcgtccgc ggctccacgt gcatctgctc cacgagcagc gagcgcggga
     1141 tggtcgcctc ggcggtgacg cgcttgccac gcgtgcgcag catgttgatg tacgagacct
     1201 tcttgtcgct cgagagctgg gagtccagga agtagctgcg cacggcggga ttgttcgccg
     1261 cgatccactc gcaggcggcc agcgtcgcgc ggcccaccat gttctgcccg cccgcgtcgc
     1321 cggtggtgta gtcgagccgc aggaaggcga agcggctcgc gaggtagctc tcgatgcgct
     1381 ggagcttcgc gacgtgcgac gtcgcctcgg cgacctgccg gatgtcggcg accttttcct
     1441 gcacccacac cgcgaagtca cgcgcgtccc gcgccgagtc gaagatgaac accggcgccc
     1501 gctgcatccg gtcggcggag acggtacaga tcactccgcc tgcggcgttc agcagcttga
     1561 tcccccggtt gtacgacgcg acgagcgacc cctccgtcgt cgcgagcggg atcaggaact
     1621 cgcccatggc gtgctcaccg tgcaccgtca gcggccccgc gaaggccagc ggcacctgcg
     1681 ccacgccggt gaacgactcg atgttcccca gcgtcgaggt cggatcgatc gagaagtgcg
     1741 tcacgtgatg gagcgtcacg caggcacatt cctccacgaa gcgctgccgg acgctggccg
     1801 catcgaggct gtggtcccgc acgatgtcct tctggtaggg tacgccctcc gccatcatgg
     1861 tcgcctgcat ggcacacctc ccccccgcgc tcgggtatgc ctcaacctcg tcgtcccgcg
     1921 cgggggacgc tgtcaggcaa acggcggcgc gccgggcgtt gcctgacggc cgtgatcgac
     1981 gcccgacgct agcttgggcc catggatacc gtcctcttca ccggctttcc gggtttcctc
     2041 ggcagcgagc tgctgccgcg cgtgctcacg cgcatgcgcg acgcggcagc ggtctgcctg
     2101 gtgcagccga agtacgcgcc gctcgcccgc actcggctcg acgagctcgt cgcacgatct
     2161 cccgacctgg ccggacgcgt gcgcatcgtc gaaggggaca tcgtgctgcc cgacctcgga
     2221 ctcggcgcgg ctaccgagct cgcgtcgagc gtcgtcgaga tcttccatct cgccgccgtc
     2281 tacgacctct cggtcgggcg cgcgctcgcg atgcgcgtga acgtggacgg caccacgcac
     2341 atgctcgcct tcgccgcgcg ctgcccgcgc ctgcgccgct tccagtacgt cagcacctgc
     2401 tacgtgagcg gacgtttccc cggcaccttc accgaggaca tgctcgagga aggacagacc
     2461 ttcaacaact tctacgagga gacgaagtat ctcgcggagg tggaagtgcg gcgtgccatg
     2521 cgggagggcc tgccagcgac gatctaccgg cccgcggtgg tggtcggcga cagcaccacc
     2581 ggcacgaccc agaagtacga cggaccctac ttcgccatgc agtggctgct gcgccagccg
     2641 aaggttgccc tcatgcccgt cgtcggcaac gcgcgcgcaa cccgcttcaa cgtggtgcct
     2701 cgcaacttcg tcgtc
//
LOCUS       DASSYW010000628         4882 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_792947, whole genome shotgun sequence.
ACCESSION   DASSYW010000628 DASSYW010000000
VERSION     DASSYW010000628.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4882)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4882)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4882
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_792947"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..810)
                     /gene="rsgA"
                     /locus_tag="VFN38_10055"
     CDS             complement(<1..810)
                     /gene="rsgA"
                     /locus_tag="VFN38_10055"
                     /inference="COORDINATES: protein motif:HMM:TIGR00157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome small subunit-dependent GTPase A"
                     /protein_id="HET9012146.1"
                     /translation="MTTPGEMETSELQGVVLSGTGGIWRVRRDDGSVVEASLRGRVKN
                     SNAGRRADGSLRRDTISSAADTLKLTIGDRVLLEQDAPTGAAAIAEILPRRSRLARRA
                     PGGGQGERIVAANVDQVVVVFAAANPEPHPRMLDRFLVIAEANDLASRIVINKVELVG
                     GADVARERWMDYERAGYTMHYTSVKRREGLEALHDALAGQVSVLTGPSGVGKSSLLNA
                     MFAGLDLRVGEISESVNKGRHTTVGGYLHPLPGGEGGYVADTPGLREVGMWA"
     gene            complement(807..1226)
                     /locus_tag="VFN38_10060"
     CDS             complement(807..1226)
                     /locus_tag="VFN38_10060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012147.1"
                     /translation="MPGQHLPADHSRGDANTIGGYAAVHGRPAAFEGTDGLSYSVEIV
                     TAPTGDAERPWGAYLLFVQWSRVGGTSPVGHLETDFLAEADTENDARAIVGALSLGQV
                     RAALHALIAERAGGTPARRWWDAMKDEGHDADAGDAS"
     gene            complement(1237..2172)
                     /locus_tag="VFN38_10065"
     CDS             complement(1237..2172)
                     /locus_tag="VFN38_10065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline dehydrogenase family protein"
                     /protein_id="HET9012148.1"
                     /translation="MIRNTLLYLSNQPRVFKFVRNNRLAKHFARRFVAGETVAEALAA
                     VKELNAKGITASLDLLGESVYTEKEARAARDEYLQILDRIRDAKLDANVSVKLTAMGL
                     DVDNELCVAIMQDILARAQRHATFVRIDMESSEYTELTLKLFEERLYPQYKANVGVVL
                     QSYLYRTFADVEHMNTLRARVRICKGAYKEPAKVAYPDKKDVDANYIKCMRELMLKGN
                     YPGIATHDPAMINEAKRWAKEQGIGVDRFEFQMLYGVRRDLQESLVKEGYRVRCYVPF
                     GTQWYPYLMRRLAERPANVAFITGNVIREALHGHA"
     gene            complement(2268..3917)
                     /locus_tag="VFN38_10070"
     CDS             complement(2268..3917)
                     /locus_tag="VFN38_10070"
                     /inference="COORDINATES: protein motif:HMM:NF012471.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M14 family metallopeptidase"
                     /protein_id="HET9012149.1"
                     /translation="MLAALVLSGVSGCAVSSRTSAAESGVSVGIYSPSSVARVPATRA
                     ERTNYLETSHYADVVVFLDSLKRLGAPYAFGSIGRTFEGRDIPYVVASRPLVHTPAEA
                     QATGKPIVYVQGNIHAGEVEGKEALLAMLRDLAFARGPGVLDSIVLIAVPIYNADGNE
                     RFGPQEKQRSEQNGPELVGQRPNAQGLDLNRDYIKAEAPETRASLRMFALWNPDVFVD
                     LHTTDGSFHGYALTYSPSLNPAAPLGAYTRELLAELRKRVRDREHYETFDYGNFADAF
                     GREVSTDTVPKGWYTYDHRPRFGTNYYGLRNRVAILSEAFSHDSFERRVKSTYAFTRQ
                     LLSLVAERGTELTEHTRVITLSLDEIPKIPLRAALPPTAPQQPVTFEVLARTGDSSRT
                     EAGVPKGLRRTGEFRTRSMPVFDRFVSTLDVLEPLAYLVRATDTSIVARLRQHGLTAR
                     RFTPVSGPTDEFVVDSIVRAPRVFQGHNEVRVVGHWRRAAQPPRGEWLTVPAVAPLTP
                     LVMYLLDPESDDSFATWNLLDAGLQVGQVYPVLRVSTLDGR"
     gene            complement(3953..4783)
                     /locus_tag="VFN38_10075"
     CDS             complement(3953..4783)
                     /locus_tag="VFN38_10075"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HET9012150.1"
                     /translation="MRVIRVLQDNAALKSRLAQVAMRPAEFIKVPMPDGLVLDGYRIV
                     PANFDSTKKYPVLMYVYGGPAAPQVSDSWGGTRLLWHQSLAQQGYVVVCVDNRGAAWR
                     GRDFRKTTQYTLGVKETQDQIDAAKWIGRQSWGDASRIGIWGWSYGGFMSANAAGRGG
                     DVFKAALVVAPVTDWNLYDTIYTERFLWTPKENPSGYRDGSPQTWVNGVKARMLIVHG
                     TGDDNVHPQNTYQYVNKLEAAGKPFYMLLYPNRTHSISGGNTSIHLYNSFTRFLLENL
                     "
BASE COUNT          755 a         1631 c         1678 g          818 t
ORIGIN      
        1 cgcccacatt cccacctcgc gcagtcccgg ggtatcggcg acgtagccgc cttcgccgcc
       61 cggaagggga tgcaggtacc cgccgaccgt ggtgtgccgt cccttgttca ccgactcgct
      121 gatctcgccg acgcgcaggt cgaggccggc gaacatcgcg ttgagcaatg acgacttgcc
      181 gaccccggac ggacccgtga gcacgctcac ctggccggcg agcgcatcgt gcagcgcctc
      241 gagcccttcg cgccgcttca cgctcgtgta gtgcatcgtg tagccggcac gctcgtagtc
      301 catccagcgc tcgcgggcca cgtcggcgcc acccaccagc tccaccttgt tgatcacgat
      361 gcgcgacgcc aggtcgttcg cctcggcgat gacgaggaag cggtcgagca tgcgcgggtg
      421 cggctcgggg ttcgccgccg cgaacacgac gaccacctga tccacgttcg cggcgacgat
      481 gcgctccccc tggccgccgc ccggcgcgcg gcgcgcgaga cgggagcgtc gcgggaggat
      541 ctccgcgatg gcggcggcgc ccgtaggcgc gtcctgctcg agcagcacgc ggtcgccgat
      601 cgtgagcttg agcgtgtcgg ccgccgagga gatcgtgtcg cggcgcaggc tgccgtcggc
      661 gcgacgcccg gcgttggagt tcttcacgcg gccgcgcagt gacgcctcga cgaccgatcc
      721 gtcgtcccga cgcacgcgcc agatgccgcc cgtaccgctc aacacgacgc cctgcagctc
      781 cgacgtctcc atctcgcccg gcgtcgtcac gatgcgtcgc ccgcgtcggc atcgtgtcct
      841 tcgtccttca tcgcatccca ccagcggcgc gcgggtgtgc cgccggcacg ttcggcgatc
      901 agggcgtgga gcgcggcgcg cacctggccg agcgacagcg ccccgacgat cgcgcgcgcg
      961 tcgttctccg tgtcggcttc agcgaggaaa tccgtctcca ggtgtccgac cggcgacgtg
     1021 ccgccgacgc gcgaccactg cacgaagagc aggtacgcgc cccatggccg ctccgcgtcg
     1081 ccggtggggg cggtcacgat ctcgacgctg taggacaggc cgtcggtgcc ctcgaacgcc
     1141 gcggggcgcc cgtgcaccgc ggcgtagccg ccgatggtgt tggcgtcgcc gcgggagtga
     1201 tcggcgggga gatgctggcc gggcatggcg atggcgctac gcgtgaccgt ggagcgcctc
     1261 acgaatgacg ttgccggtga tgaaggcgac gttggccggg cgctccgcga gccggcgcat
     1321 gagatacgga taccactgcg tgccgaacgg cacgtagcag cgaacgcgat acccttcctt
     1381 cacgagcgac tcctggagat cgcgacgcac gccatacagc atctggaact cgaaccggtc
     1441 gacgccgatg ccctgctcct tcgcccagcg cttcgcctcg ttgatcatcg ccgggtcgtg
     1501 cgtggcgatc cccgggtagt tccccttgag catcagctcg cgcatgcact tgatgtagtt
     1561 cgcgtcgacg tccttcttgt ccgggtacgc gaccttggcc ggctccttgt acgcgccctt
     1621 gcagatgcgc acgcgtgcgc gaagggtgtt catgtgctcc acatcggcga aggtgcgata
     1681 caggtagctc tggagcacga cgccgacgtt ggccttgtac tgcggataga gccgctcctc
     1741 gaacagcttg agcgtgagct ccgtgtactc gctcgactcc atgtcgatgc gcacgaaggt
     1801 cgcgtgccgc tgcgcccggg cgaggatgtc ctgcatgatg gcgacgcaca gctcgttgtc
     1861 gacgtcgagg cccatcgccg tcagcttcac ggagacgttg gcgtccagct tcgcgtcgcg
     1921 aatccggtcg aggatctgga gatattcgtc gcgggcggcg cgggcttcct tctcggtgta
     1981 gacgctctcg ccgagcaggt cgagcgaggc ggtgatcccc ttggcgttga gctccttcac
     2041 ggcggcgagc gcttcggcga ccgtctcgcc agccacgaaa cggcgggcga agtgcttcgc
     2101 gaggcgattg ttgcggacga acttgaagac gcgcggctga ttggagaggt agagcagggt
     2161 gttgcggatc attggacctc gaagcgacga cgaccggcgt gggaccggga gaagcgtggg
     2221 aatgtaatct gggccgaatg gtgcggtgag cctgtgaccc cagtcggtca gcggccgtcg
     2281 agcgtggaga cgcgcagcac gggatagacc tggcccacct gaagaccggc gtcgagcagg
     2341 ttccaggtcg cgaaggaatc gtcggattcc ggatccagga gatacatcac gagcggggtg
     2401 agcggcgcga ccgccggcac cgtgagccat tccccccgtg gcggctgcgc tgcacgccgc
     2461 caatgcccga cgacgcgaac ttcgttgtgt ccctgaaaca ccctcggcgc gcgcacgatg
     2521 gaatcgacga cgaactcgtc cgtcggaccg gacaccggcg taaatcgacg ggcggtgagc
     2581 ccgtgctggc gcagtcgggc cacgatcgac gtatccgtgg cacgcaccag ataggcgagg
     2641 ggttcgagca cgtcgagcgt cgagacgaac cgatcgaaca ccggcatgct cctcgtgcgg
     2701 aattccccgg tccgacgcag ccccttcggc acgccggcct cggtgcgcga tgagtccccc
     2761 gtacgtgcaa gcacctcgaa ggtcacgggc tgctgcggtg ccgtcggcgg gagtgcggcg
     2821 cgcagtggta ttttcggaat ttcgtcgagc gacagggtga tcacccgggt atgctcggtc
     2881 agctccgtcc cccgctccgc caccagtgac agcagctgcc gcgtgaacgc atacgtgctc
     2941 ttgacccgcc gctcgaacga gtcgtgcgag aacgcttcgc tgaggatcgc gacgcgattt
     3001 cgcagcccgt agtagttcgt gccgaagcgc gggcgatggt cgtaggtgta ccagcccttc
     3061 ggcaccgtgt cggtgctcac ctcgcgcccg aacgcgtcgg cgaagttgcc gtagtcgaag
     3121 gtctcgtagt gctcgcggtc gcgcacccgc ttgcgcagct cggccagcag ctcccgcgtg
     3181 tacgcaccca gcggcgcagc ggggttgagc gacggcgagt aggtgagcgc gtagccgtgg
     3241 aagctgccgt ccgtcgtgtg caggtcgacg aagacgtcgg gattccagag cgcgaacatc
     3301 cgaagcgacg cacgcgtctc gggcgcctcg gccttgatgt agtcgcggtt gagatcgagc
     3361 ccctgcgcgt tcgggcgctg acccacgagc tcggggccgt tctgctccga gcgctgcttc
     3421 tcctgcgggc cgaaccgctc gttgccgtcg gcattgtaga tcgggacggc gatgagcacg
     3481 atggagtcga ggacacccgg gccgcgcgcg aaggcgagat cgcgcagcat ggccagcagc
     3541 gcttcctttc cctccacttc gccggcgtgg atgttcccct gcacgtacac gatcggcttg
     3601 cccgtcgcct gcgcctcggc cggcgtgtgc acgagggggc gggacgcgac gacgtacggg
     3661 atgtcgcgac cctcgaaggt cctgccgatg gaaccgaagg cgtagggtgc gccgaggcgc
     3721 ttcagcgagt cgaggaagac gacgacgtcg gcgtagtggg aggtctcgag gtagttcgtg
     3781 cgctcggcgc gggtcgcggg aactcgagct accgaggaag gagagtagat cccgacactc
     3841 acgccgcttt cagcggcgct cgtgcgggat gacaccgcgc acccggagac gccgctcagc
     3901 acgagggcgg cgagcatcgc tcgccgccca agcgtgaatt catgcagtcc gctcacaggt
     3961 tctcgagcag gaagcgcgtg aacgagttgt acaggtggat cgaggtgttg ccgcccgaga
     4021 tggagtgcgt acggttcggg tagagcagca tgtagaaggg ctttcccgcc gcctcgagct
     4081 tgttgacgta ctgataggtg ttctgcgggt ggacgttgtc gtccccggtg ccgtgcacga
     4141 tcagcatgcg cgccttcacg ccgttcaccc aggtctgcgg cgagccgtcg cggtagccgc
     4201 tggggttttc cttcggcgtc cagagaaagc gctccgtgta gatcgtgtcg tagagattcc
     4261 agtcggtcac cggagcgacg acgagcgccg ccttgaacac atccccaccg cggcccgcgg
     4321 cgttggccga catgaatccg ccgtagctcc acccccagat gccgatccgg ctcgcgtcgc
     4381 cccagctctg ccggccgatc cacttcgcgg catcgatctg gtcctgcgtc tccttcacgc
     4441 cgagggtgta ctgcgtcgtc ttgcggaaat cgcgtccgcg ccacgcggcg ccgcggttgt
     4501 ccacgcacac caccacgtag ccctgctgcg ccaggctctg gtgccagagc agccgcgtcc
     4561 cgccccacga atcgctcacc tgcggcgcgg cggggccgcc gtacacgtac atcagcaccg
     4621 ggtacttctt cgtgctgtcg aagttcgccg gcacgatacg gtagccgtcg agcacgaggc
     4681 catcgggcat cgggaccttg atgaactccg ccggtcgcat cgccacctgc gccagccgcg
     4741 acttcagcgc cgcgttgtcc tgcaacacgc ggatgacgcg catcgacggc agggaataca
     4801 gcgtggccgt agccggcgag ctgatggtgg agtggatgtc caccgcgtac ttcgcgtcgg
     4861 ggctgatgtt gaagaagtgc gt
//
LOCUS       DASSYW010000629         2330 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_54415, whole genome shotgun sequence.
ACCESSION   DASSYW010000629 DASSYW010000000
VERSION     DASSYW010000629.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2330)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2330)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2330
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_54415"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..208
                     /locus_tag="VFN38_10080"
     CDS             <1..208
                     /locus_tag="VFN38_10080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012151.1"
                     /translation="LVGRAGRVVAAVGAVALVGAAASVGHSGGELVYRHGAASAYAPA
                     SVGARGSEGAAVARTRVADNDDDR"
     gene            220..774
                     /locus_tag="VFN38_10085"
     CDS             220..774
                     /locus_tag="VFN38_10085"
                     /inference="COORDINATES: protein motif:HMM:NF012575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske (2Fe-2S) protein"
                     /protein_id="HET9012152.1"
                     /translation="MSDHNDVPERATAEVNAGKACDACPLATDRRGFLRDMAIAVVAA
                     VAVAGLAPGAAFARSVHAISPLASTAVRRRYELPRTDGVSIDDENEVILARWQNRIYA
                     FSLRCPHRGTRLTWHADESRVFCPKHKARFRPDGAHDSGRRSRALDRYDLRLEGSDVV
                     VDLGSLHRVDEDPDGWNAAVLSVG"
     gene            complement(814..1311)
                     /locus_tag="VFN38_10090"
     CDS             complement(814..1311)
                     /locus_tag="VFN38_10090"
                     /inference="COORDINATES: protein motif:HMM:NF025046.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4149 domain-containing protein"
                     /protein_id="HET9012153.1"
                     /translation="MSTLYYANVTVHVLAAMLWLGGMLFLGVVGAPVLRAVEPPALRQ
                     MLFQQLGLRARAMGWWAIGVLLVTGTVNLHYRGWLHWNGVLGSADFWRTTTGHVLALK
                     LGAVTAMLAVSAIHDFVLGPMAGRAVPGSAAALAHRRRAALLARVNALVGVLVVVAAV
                     RLTRG"
     gene            complement(1492..1563)
                     /locus_tag="VFN38_10095"
     tRNA            complement(1492..1563)
                     /locus_tag="VFN38_10095"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1529..1531),aa:Cys,seq:gca)
     gene            1657..>2330
                     /locus_tag="VFN38_10100"
     CDS             1657..>2330
                     /locus_tag="VFN38_10100"
                     /inference="COORDINATES: protein motif:HMM:NF013718.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HET9012154.1"
                     /translation="MTDSEGQRRRAPRPLGTMERREGMRGRFHLLWDLVFRGLRAVGM
                     RAGSFYTTVGIFLVVGTLIAVAGTLAFAELGEWVREGATQKYDVAVLQWMGRHHTPLL
                     TQMATELTYLGTGTVVLMIVAVAALFLWHTEHKHSARLLLAAVAGNILLNGMLKLLFS
                     RPRPAVFEWQTHAVSSSFPSGHAMSATVCYGTVAYLVIRLQKHHWSRLLTGTAAVVLI
                     LLICATR"
BASE COUNT          338 a          860 c          816 g          316 t
ORIGIN      
        1 cctcgtcggc cgcgcgggac gcgtggtcgc cgctgtggga gcggtggcgc tcgtgggcgc
       61 cgccgcgagc gtggggcaca gcggtgggga gctggtctac cgtcacggcg cggccagcgc
      121 gtatgcgccg gcctccgtcg gcgcgcgtgg gagcgagggc gccgccgtcg cccgcacccg
      181 cgtcgccgac aacgacgacg accgctgagc ggagatccga tgagcgacca caatgacgtc
      241 cccgagcgcg ccacggcaga agtgaatgcc ggcaaggcgt gcgatgcctg tcccctcgcg
      301 accgaccgcc gcggcttcct tcgcgacatg gcgatcgccg tcgtcgccgc ggtcgccgtc
      361 gccggtctgg ctccgggagc cgcgttcgcg cggagcgtgc acgccatctc gccgctcgcg
      421 agcacggcgg tgcggcggcg atatgagctc ccccgcaccg acggcgtctc catcgacgac
      481 gagaacgagg tgatcctcgc gcgctggcag aaccgcatct acgccttctc gctgcgctgc
      541 ccgcaccgcg gcacgaggct cacctggcac gccgacgagt cgcgcgtctt ctgcccgaag
      601 cacaaggcgc gattccgccc cgacggcgcg catgacagcg gccggcgcag ccgggcactc
      661 gaccggtacg acctgcgtct cgagggctcc gacgtcgtcg tggatcttgg ctcgctgcat
      721 cgggtggacg aggatccgga cggctggaat gccgcggtgc tgtccgtggg atgacggcgg
      781 gcgacgggtg cgggcgccgc ggtggacggc gcctcagccg cgcgtcagcc gcacggcggc
      841 gacgaccacc agcacgccga cgagcgcgtt gacgcgcgcg agcagcgcgg cgcgacgccg
      901 gtgcgcgagc gccgccgcgg agccgggcac ggcgcggccg gccatcggtc ccagcacgaa
      961 gtcgtggatc gcgctcaccg ccagcatcgc ggtcacggcg ccgagcttga gcgcgagcac
     1021 gtgtccggtg gtggtgcgcc agaagtcggc ggagccgagc acgccgttcc agtgcagcca
     1081 gccgcggtaa tgcaggttga cggtgccggt gaccagcaac acgccgatgg cccaccagcc
     1141 catcgcgcgc gcgcgcaggc cgagctgctg aaagagcatc tgccgcagcg ccggcggctc
     1201 cacggcgcgc agcaccggcg cgccgacgac gccgaggaag agcatcccgc ccagccacag
     1261 catggcggcg agcacgtgga cggtgacgtt cgcgtagtag agcgtcgaca tcggctatcg
     1321 atgtggcacg ggaggggagg agctcgatgc gtacttcgat cgtgcgggcg ggcgccacgg
     1381 ggacgccgac ccgcgtcgcc ggccccaagg caacgaggcc ccgcatgcgc ggggcctcgt
     1441 cgtcgtccga tgtccgccag cccacgacga ttgccgagag ctgcgatgca gaggcgccgg
     1501 tcggaatcga accgacgaat agcagatttg cagtctgccg ccttaccact tggccacggc
     1561 gccgtgcacc caagctaacg ccccgtcacc ccttccctca acccgcgacc agcggccacg
     1621 ctcgcccggc gcggctcttg ataccatctt gcccccatga ccgactccga aggacagcgc
     1681 cgccgcgcgc cgcgccccct ggggaccatg gaacgccgcg aggggatgcg aggacggttc
     1741 cacctgctct gggacctcgt cttccgcgga ctgcgcgccg tcgggatgcg cgcggggagc
     1801 ttctacacca ccgtcgggat cttcctcgtc gtcggcaccc tcatcgccgt cgcgggcacc
     1861 ctggcgttcg ccgagctcgg cgagtgggtc cgcgaaggcg cgacccagaa gtacgacgtc
     1921 gccgtgctgc agtggatggg acgtcaccat acgcccctcc tcacgcagat ggccacggag
     1981 ctcacctacc tgggcaccgg gaccgtggtc ctcatgatcg tcgccgtggc ggctctcttc
     2041 ctctggcaca cggagcacaa gcactcggcg cgcctgctcc tggccgccgt cgccggcaac
     2101 atcctgctga acggcatgct gaagctcctc ttctcccggc cgcgccctgc cgtgttcgag
     2161 tggcagaccc acgccgtgag ctcgtcgttc ccgtcggggc atgcgatgag cgcgacggtg
     2221 tgctacggca ccgtggcgta tctcgtcatc cggctccaga agcaccactg gtccagactg
     2281 ctcaccggca cggcggccgt cgtcctgatc ctgctcatct gcgccacgcg
//
LOCUS       DASSYW010000630         2333 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_765899, whole genome shotgun sequence.
ACCESSION   DASSYW010000630 DASSYW010000000
VERSION     DASSYW010000630.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2333)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2333)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2333
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_765899"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..444
                     /gene="aroQ"
                     /locus_tag="VFN38_10105"
     CDS             <1..444
                     /gene="aroQ"
                     /locus_tag="VFN38_10105"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003855 - 3-dehydroquinate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II 3-dehydroquinate dehydratase"
                     /protein_id="HET9012155.1"
                     /translation="IAVLSGPNLNLLGIREPALYGSTTLADVEARLADVGRELGVEVE
                     CAQHNVEGALVELVHAMRGRVQGVVVNAGAYSHTSLALRDALTGVALPFVEVHVTNVY
                     AREPERHHSMLAPAAVGVVVGMGAHGYELALRGLVHTLRGREARA"
     gene            441..1529
                     /locus_tag="VFN38_10110"
     CDS             441..1529
                     /locus_tag="VFN38_10110"
                     /EC_number="3.4.11.9"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HET9012156.1"
                     /translation="MSDLRPLRLAALVDGLTAAHLDALLLTGLSNIRYLTGFSGSSAL
                     LVVTPRDVVLITDFRYQTQVVSEVGDLARISIEAASLWTGLWQQLASMPSIKVIGFET
                     AHVQHRDFQRLVEAGARWQWRPTMDLVETLRERKDGSEIARIQDAAGVATRALERTLP
                     QLRVGMTELAVAGVLEKALRDEGSEGFPFPSIVASGPRAALPHARSSARALEQGDFLL
                     MDFGAEVGGYCSDVTRTVVMGRASEEQREVYETVRGANERAARGVRAGMSGRDADAIA
                     RHYIERAGYGELFGHSLGHGIGLEVHEAPRLARTADGALPEGAVVTIEPGIYRPGWGG
                     VRIEDDVVLGADGPHILTEFPRELMELG"
     gene            1574..2077
                     /gene="accB"
                     /locus_tag="VFN38_10115"
     CDS             1574..2077
                     /gene="accB"
                     /locus_tag="VFN38_10115"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HET9012157.1"
                     /translation="MIDLRYVKKLIDILDESTVDSIEISSDKGMKIRISKSPTGRGAM
                     QVAAQPVLAPMMAPQAALPAGRPTPVEGMPAVDEASRAPAGKSGTEVKSPMVGTFYGA
                     PEPGAKPYVAVGTRVSKGQILCIIEAMKIMNEIESEVTGVVTEVLAQDATPVEYGQAL
                     FRIDPNG"
     gene            2070..>2333
                     /locus_tag="VFN38_10120"
     CDS             2070..>2333
                     /locus_tag="VFN38_10120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pili twitching motility protein PilT"
                     /protein_id="HET9012158.1"
                     /translation="MAKRPAPATAAPGAAPSGGGGTFNFKEVLQQLVQRNASDLHLKV
                     GRPPTLRLHGELVPLDQPALKPEDLKSLAEQLMTPRQVKEFTDN"
BASE COUNT          347 a          770 c          887 g          329 t
ORIGIN      
        1 atcgccgtcc tgagcggacc gaacctcaac ctgctcggca ttcgcgagcc cgcgctctac
       61 ggctccacga cgctcgccga cgtggaggcc cggctggccg acgtcgggcg ggagctcggc
      121 gtggaggtgg agtgcgcgca gcacaacgtg gagggcgcgc tcgtggagct cgtgcacgcg
      181 atgcgcgggc gcgtgcaggg cgtggtcgtg aacgccggcg cgtactcgca caccagcctc
      241 gcgctgcgcg acgcgctcac cggcgtcgcg ctccccttcg tcgaggtgca cgtcacgaac
      301 gtgtacgccc gcgagccgga gcggcaccac tcgatgctcg cgccggcggc agtcggcgtg
      361 gtcgtcggca tgggagcgca cggctacgag ctcgcgctgc gcgggctggt gcacacgctg
      421 cgcggccgcg aggcgcgcgc gtgagcgatc tccggccgct ccgcctcgcc gccctggtgg
      481 acgggctcac ggcggcgcac ctcgacgccc tccttctcac ggggctgtcg aacatccggt
      541 atctcaccgg attctccggg tcgagcgcgc tcctcgtggt gacgccgcgc gacgtcgtgc
      601 tgatcaccga cttccgctac cagacgcagg tcgtgtcgga ggtcggggac ctcgcgcgca
      661 tctcgatcga ggcggccagc ctgtggacgg ggctgtggca gcagctcgcg tcgatgccga
      721 gcatcaaggt catcggcttc gagacggcgc acgtgcagca tcgcgacttt cagcgcctcg
      781 tggaggccgg tgcgcgatgg cagtggcggc ccacgatgga cctcgtggag acgctgcgcg
      841 agcgcaagga cggatcggag atcgcgcgca tccaggacgc ggcgggggtg gccacgcgcg
      901 cgctcgagcg gacgctgccg cagcttcgcg tcggcatgac ggagctggcc gtggccgggg
      961 tgctggagaa ggcgctgcgg gacgagggga gcgagggctt tccttttccc tcgatcgtgg
     1021 cgagcgggcc gcgcgccgcg ctgccgcacg cgcggtcgtc ggcgcgtgcg ctcgagcagg
     1081 gcgacttcct gctcatggac ttcggcgccg aagtgggcgg gtactgctcc gacgtgacgc
     1141 gcaccgtggt gatggggcgg gcgtccgagg agcagcgcga ggtctacgag accgtgcgcg
     1201 gcgccaacga gcgtgccgcg aggggcgtcc gggccggaat gagcgggcgg gatgccgatg
     1261 ccatcgcgcg ccactacatt gagcgggctg gctatggtga gctgttcggc cacagtctcg
     1321 gccacgggat cggtctcgag gtgcacgaag cgccccggct ggcccggacc gccgacgggg
     1381 ccctgccgga gggagccgtg gtgacgatcg aaccggggat ctatcgcccg ggctggggcg
     1441 gcgtgcgtat cgaggacgac gtggtgctcg gcgcagacgg accgcacata ctgacggaat
     1501 ttccgcgcga gctcatggag cttggctgaa gatgccgcgc gacctgtcgc ggcgcgacat
     1561 acccactggg cctatgatcg acctacgtta cgtcaagaag ctcatcgaca tcctcgacga
     1621 atcgacggtg gactcgatcg agatctcctc ggacaagggg atgaagatcc gcatctcgaa
     1681 gagcccgacc gggcgcggcg ccatgcaggt ggcggcgcag ccggtgctgg cgccgatgat
     1741 ggcgccgcag gcggcgctgc cggcggggcg tccgacgccc gtcgagggga tgcccgccgt
     1801 ggacgaggcg tccagggcgc cggccggcaa gtcggggacg gaggtcaagt cgccgatggt
     1861 cggtaccttc tatggtgcgc ccgagccggg ggccaagccc tacgtggccg tggggacgcg
     1921 cgtctcgaag gggcagatcc tctgcatcat cgaggcgatg aagatcatga acgagatcga
     1981 gtccgaggtc accggcgtgg tgacggaggt gctcgcccag gacgccacgc cggtggaata
     2041 cggccaggcg ctcttccgca tcgatccgaa tggctaagcg tccggctccg gcgaccgcgg
     2101 cgcccggtgc cgcgccgagc ggcggcggcg gcacgttcaa cttcaaggaa gtgctgcagc
     2161 agctcgtgca gcgcaacgcc tcggacctgc acctgaaggt cgggcggccg cccacgctgc
     2221 ggctccatgg cgagctggtg ccgctcgacc agcccgcgct caagccggaa gacctcaaga
     2281 gcctggccga gcagctcatg acgccgcggc aggtgaagga gttcacggac aac
//
LOCUS       DASSYW010000631         2050 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1829475, whole genome shotgun sequence.
ACCESSION   DASSYW010000631 DASSYW010000000
VERSION     DASSYW010000631.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2050)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2050)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2050
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1829475"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            141..1409
                     /gene="ftsZ"
                     /locus_tag="VFN38_10125"
     CDS             141..1409
                     /gene="ftsZ"
                     /locus_tag="VFN38_10125"
                     /inference="COORDINATES: protein motif:HMM:TIGR00065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HET9012159.1"
                     /translation="MAREREQTDMRMTLAPDARRGAKIKVIGVGGGGSNAVNRMVDVG
                     LGGVEFIVANTDLQALDHAKAAMKLQIGHKLTKGLGAGADPNIGRQAALEDTDNIIQT
                     LSGADMIFVTTGLGGGTGTGAAPVIASLASELGALTIAVVTKPFKFEGKKRALQAEAG
                     LEALRECVDTVITIPNERLLSIIDRRTTMNDAFTLADDVLRQAIQGISDLILVPGMIN
                     LDFADVKTIMSGMGVAMMGTGMAEGDNRAMTAAQKAIASPLLEDSSVNGARGVIINVT
                     GGPDLSLIEVNEASCVIQEAAHEDANIIFGAVVDPDLVGKVKITVIATGFDRKTSRVS
                     ATGASQTPVDMSRYQEYAQRVAAAAGAGPLLLDPTEPAPQPISRRPTIEVPLRSVDAG
                     SKAVRAGASGNGDAPDLSSQFDVPAFLRRT"
     gene            1503..>2050
                     /locus_tag="VFN38_10130"
     CDS             1503..>2050
                     /locus_tag="VFN38_10130"
                     /inference="COORDINATES: protein motif:HMM:NF040068.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012160.1"
                     /translation="MSQFHQCEQARALLAKEVGYVRKPHAGRLRVALAFPNTYFVGMS
                     NLGFQTVYRLFNAEDGIVCERTFLPPKSEVAALKASSASLVTLESQMLVRDFDILAFS
                     VSFEWDYTNVLTMLRLAGIPARADARTHHDPLVMIGGAVTFVDPEPLALFADVIAAGE
                     GEALIPPLLTAFRDASDRDDLLR"
BASE COUNT          335 a          680 c          726 g          309 t
ORIGIN      
        1 gttcgcgacg ccggtggggc tggcgttgta tgcgcaccgc aaccgcccgc cggagcaggc
       61 gcgtggcggc gccggcgcgt tcagccggat gaccggccgc atctggggca ttttcaaaga
      121 gtttttctga gggggtgggt atggcacgtg aacgcgagca gacggacatg cgcatgacgc
      181 tggcgccgga cgcgcgacgg ggcgcgaaga tcaaggtgat cggcgtgggc ggcggcggca
      241 gcaacgccgt caatcgcatg gtcgacgtgg ggctcggcgg cgtcgagttc atcgtcgcca
      301 acaccgacct gcaggcgctc gaccacgcca aagcggcgat gaagctgcag atcgggcaca
      361 agctcacgaa ggggctgggt gccggcgccg atcccaacat cggccgccag gcggcgctcg
      421 aggacaccga caacatcatc cagacgctgt cgggcgccga catgatcttc gtgaccacgg
      481 gtcttggcgg cggcaccggc accggtgccg cgcccgtcat cgccagtctc gcgagcgagc
      541 tcggcgcgct gacgatcgcg gtcgtcacca agccgttcaa gttcgagggg aagaagcgcg
      601 cgctgcaggc cgaggcaggg ctcgaggcgt tgcgcgagtg cgtcgacact gtcatcacca
      661 tccccaacga gcggctcctg tcgatcatcg accgccgcac gacgatgaac gacgcgttca
      721 cgctggccga cgacgtgctg cgccaggcga ttcagggcat ctcggacctg atcctcgtgc
      781 ccggcatgat caacctcgac ttcgccgacg tgaagaccat catgtcgggc atgggcgtgg
      841 cgatgatggg caccggcatg gccgaggggg acaaccgcgc gatgacggcg gcgcagaagg
      901 cgatcgccag cccgctgctc gaagacagct cggtgaacgg cgcgcgcggc gtgatcatca
      961 acgtgaccgg cggccccgac ctgtcgctga tcgaagtgaa cgaggcgtcg tgcgtcatcc
     1021 aggaagcggc gcacgaggac gccaacatca tcttcggcgc ggtggtggat cccgacctcg
     1081 tgggcaaggt gaagatcacg gtcatcgcga ccgggttcga tcgcaagacg agccgcgtgt
     1141 ccgcgacagg cgcgtcgcag acgccggtgg acatgtcgcg ctaccaggaa tacgcgcagc
     1201 gtgtcgcggc ggcggccggt gccgggccgc tgcttctgga tccgaccgag ccggcgccgc
     1261 agccgatctc gcggcggccc acgatcgagg tcccgctgcg gagcgtggac gccggctcca
     1321 aggccgtgcg agctggggcg agcggcaacg gcgacgcccc cgacctgtcg tcgcagttcg
     1381 acgttcctgc gtttctgcgc cgcacgtagg gccgtacgta gaggcggacc ttcaggtccg
     1441 cctgcaggcg cacctaaagg tgcgcctcta cgggtgcgcc accggtcgag tacactcgat
     1501 cggtgagtca gttccatcag tgcgagcagg ccagagccct cctggccaaa gaggtcggct
     1561 acgtgcggaa accgcacgcc ggccggctgc gcgtcgcgct cgcgtttccg aacacctact
     1621 tcgtcggcat gtccaacctc gggttccaga cggtctaccg tctgttcaac gccgaggacg
     1681 gcatcgtgtg cgagcgcacg ttcctgccgc ccaagagcga agtcgccgcg ctgaaggcgt
     1741 cgagcgcgtc gctcgtcacg ctggagtcgc agatgctcgt gcgcgacttc gacatcctgg
     1801 ccttctcggt gtcgttcgag tgggactaca ccaacgtgct gacgatgctg cggctcgccg
     1861 gcatcccggc ccgcgccgac gcgcgcacgc accacgatcc gctggtgatg atcggcggcg
     1921 cggtgacgtt cgtggacccg gagccgctgg cgttgttcgc ggacgtgatt gccgcgggcg
     1981 agggcgaggc gctgattccg ccgctcctca ccgcgttccg tgacgcgagc gaccgcgacg
     2041 acctgctgcg
//
LOCUS       DASSYW010000632         2135 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_783061, whole genome shotgun sequence.
ACCESSION   DASSYW010000632 DASSYW010000000
VERSION     DASSYW010000632.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2135)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2135)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2135
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_783061"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..738)
                     /locus_tag="VFN38_10135"
     CDS             complement(<1..738)
                     /locus_tag="VFN38_10135"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015022.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016758 - hexosyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0030259 - lipid glycosylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HET9012161.1"
                     /translation="MSVSLIVAGGGTGGHLFPGVAVARELMARVPGAAVTFVGTAAGI
                     EARVIPREGLTLETIRSAGLKGKSPLALLRGLLLLPLSALDAWKVISRRRPSVVIGVG
                     GYSSGPVVALAALRGVPTLLMEQNATPGLTNRLLSRLVRTAAVTYEESLATFGSKAFV
                     AGNPVRPEFFSTAASAPAADGRTRVLVFGGSQGAHAINVAMAEGAAALAAAAPAVEVT
                     HQTGERDLSMVREAYASAGLVSRVEPFL"
     gene            complement(827..1924)
                     /gene="ftsW"
                     /locus_tag="VFN38_10140"
     CDS             complement(827..1924)
                     /gene="ftsW"
                     /locus_tag="VFN38_10140"
                     /inference="COORDINATES: protein motif:HMM:TIGR02614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative lipid II flippase FtsW"
                     /protein_id="HET9012162.1"
                     /translation="MARKLKSDRILFTATFLLVCVSIVMVYSASALVALQRFDEPNRF
                     LTKQALWTVLGLAVLAVAMRVDYRAYRNETFIWSALAFVTIMLVGVLFRAPVNGTRRW
                     FGVGGLGIQPSELAKIAAVFFTALMLERRMHRIDELRYSMLPVAIVVGGLSGLILLQP
                     DFGTAMSLLLIVAAMVFAAGLNYRYLVGTLLVALPTIYVVLMSADYRRRRLLAFWDPW
                     ADPQGDGFQIIQSLLAVGSGGVFGRGLMSGVQKLYYLPEPHTDFIYAVIAEELGLIGA
                     TCILICFCVIAWRGLRVASRAQDAFGAFVALGITTMIGVQALINMSVVLGMMPTKGIP
                     LPLVSAGGSSLLINLLGMGILLNISQHEGSE"
BASE COUNT          376 a          803 c          671 g          285 t
ORIGIN      
        1 gaggaacggc tccacgcgag acaccagccc ggccgacgca tacgcctcac gcaccatcga
       61 caggtcccgt tcgccggtct gatgcgtcac ctcgacggcc ggtgccgccg cggccagcgc
      121 cgcggccccc tcggccatcg cgacgttgat cgcgtgcgcg ccctgcgatc cgccgaacac
      181 gagcacccgc gtgcggccgt ccgccgctgg tgcgctcgcc gcggtcgaga agaactcggg
      241 ccgcaccgga ttgcccgcca cgaacgcctt gctcccgaag gtcgcgaggc tctcctcgta
      301 ggtcaccgcc gccgtccgca cgagccgcga gagcagacga ttggtcagcc cgggcgtggc
      361 gttctgctcc atcagcagcg tcggcacgcc gcgcagcgcg gcgagcgcca ccaccggccc
      421 cgagctgtag ccgcccacgc cgatcacgac cgacgggcgc cgccgcgaga tcaccttcca
      481 cgcatccagc gcgctcagcg gcagcagcag caggccgcgc agcagcgcca gcggcgactt
      541 gcccttcagg ccggcgctgc gaatcgtctc cagcgtcaat ccctcgcgcg gaatcacccg
      601 cgcctcgatc ccggccgccg tccccacgaa cgtcactgcc gctcccggca cccgcgccat
      661 cagctcgcgc gccacggcga cgcccgggaa gagatgtcct cccgtgccac cgccagcaac
      721 gatcagcgag acgctcacta gcgaggctcc gccacatgcc catctcggct ccgcctcgct
      781 aggccagtgt ctaattgccc gcccttcggg cgggcggttt gccctctcac tccgatccct
      841 cgtgctgcga gatgttgagc aggatgccca tgcccagcag gttgatcagc agcgacgacc
      901 cgccggcgct cacgagcggc agcggaatcc ccttcgtcgg catcatgccg agcacgacgc
      961 tcatgttgat gagcgcctgg acgccgatca tcgtggtgat gccgagcgcg acgaacgccc
     1021 cgaaggcgtc ctgcgcccgc gacgcgacgc gcaggccgcg ccacgcgatc acgcagaagc
     1081 agatcaggat gcaggtggcg ccgatcagcc cgagctcctc ggcgatcacc gcgtagatga
     1141 aatcggtgtg cggctcgggc aggtagtaca gcttctgcac gcccgacatc aggccacggc
     1201 cgaacacgcc gccggatccg accgcgagca gcgactggat gatctggaag ccgtcgccct
     1261 gcgggtcggc ccacggatcc cagaacgcga gcagccgccg gcgccggtag tcggcgctca
     1321 tgagcacgac gtagatcgtc ggcagcgcca ccagcagcgt gcccaccaga tagcggtagt
     1381 tgaggccggc cgcgaacacc atcgccgcca cgatgagcag cagcgacatg gcggtgccga
     1441 agtcgggctg cagcaggatg agcccggaca gcccgccgac gacgatggcg acggggagca
     1501 tcgagtagcg gagctcgtcg atgcgatgca tgcggcgctc gagcatgagc gccgtgaaga
     1561 acaccgccgc gatcttggcc agctccgacg gctggatgcc caggccgccc acgccgaacc
     1621 accgccgcgt accgttgacc ggcgccctga acagcacgcc gacgagcatg atggtcacga
     1681 acgccagcgc gctccagatg aaggtctcgt tgcggtaggc gcggtagtcc acgcgcatgg
     1741 ccaccgccag gacggccagg ccgagcaccg tccagagcgc ctgcttggtc aggaaccggt
     1801 tcggctcgtc gaagcgctgc agcgccacga gcgccgaggc gctgtagacc atcacgatgc
     1861 tcacgcacac cagcaggaag gtggccgtga aaaggatgcg atcggatttc agctttctag
     1921 ccatcgttct tacccacctg gcccacctgg cctacctggc ccacctggcc tacctggccc
     1981 acctggccta cctggcccta aagctcttgc ccattcctgc cgaaacatgc tcagcggatc
     2041 ggataagatc ccgatcccct cgcgggcaag ccggcatacg gccttccccg tgagtcgcga
     2101 acgtaagcag tcagcagtca tcagccggct cgtgg
//
LOCUS       DASSYW010000633         2519 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_651879, whole genome shotgun sequence.
ACCESSION   DASSYW010000633 DASSYW010000000
VERSION     DASSYW010000633.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2519)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2519)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2519
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_651879"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..279)
                     /locus_tag="VFN38_10145"
     CDS             complement(<1..279)
                     /locus_tag="VFN38_10145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012163.1"
                     /translation="MKPDDKLDVEAILEDLESYRPPRKGWTWRTVAPGGVDMGPFHFH
                     DMSEPLERSIPLPAAKYFEAIDPQPASSVSTEIASGRFEDDLRRMRMAA"
     gene            complement(276..641)
                     /gene="oraS"
                     /locus_tag="VFN38_10150"
     CDS             complement(276..641)
                     /gene="oraS"
                     /locus_tag="VFN38_10150"
                     /EC_number="5.4.3.5"
                     /inference="COORDINATES: protein motif:HMM:NF027866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-ornithine 4,5-aminomutase subunit OraS"
                     /protein_id="HET9012164.1"
                     /translation="MTDERIARFEQRRSELRQLTDEQLKERFWQLCEQVMEPVVELAR
                     THTSPSIERSVLLRMGVDSLSAHAAVDRIARAGLLGKGAGQVVLKVAEQRGTDVIGAV
                     AAILEDDEVLGGLALETAR"
     gene            complement(638..2041)
                     /gene="ortB"
                     /locus_tag="VFN38_10155"
     CDS             complement(638..2041)
                     /gene="ortB"
                     /locus_tag="VFN38_10155"
                     /EC_number="2.3.1.263"
                     /inference="COORDINATES: protein motif:HMM:NF040741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-oxopentanoate thiolase subunit OrtB"
                     /protein_id="HET9012165.1"
                     /translation="MSVVDISYAAVMARSNEIMKAALGIDYDAFVHSPIAFDYERMME
                     ETGYSHDDIARIQRETKVGTTPLVELRNLTEAVRRSCGSGKGARILLKDEAANASGSF
                     KARRASISAYEAARKGYEGMVAATSGNYGAAVASQAAQRGLKCIIVQEVFDSRGLGQP
                     EIVEKSRACEAYGAEVLKMSVGPELFYMLLRTLEETGFFNASLYTPFGVRGIETLGLE
                     VAAGVRERYGKDPDAVVITHAGGGNLTGTARGLRAAGCTQSRIVACSVDLGGLHMASD
                     DDFNRKSFTTGHTGFGVPFATWPDRVDVPRNAARSLRYMDEYQLVTQGEVFYVTELLA
                     KLEGLERGPAGNTSLTAAVTLARQMERDQIVVVQETEYTGAGKHHNSQLAFARENGIE
                     VRRGDPKDNVPGKAIVIPDKLEQVWGRPQELDHLRSSYVRNAAKAHPVELWDEEDVAF
                     IAADINVDTDWVRRAIA"
     gene            complement(2038..2319)
                     /gene="ortA"
                     /locus_tag="VFN38_10160"
     CDS             complement(2038..2319)
                     /gene="ortA"
                     /locus_tag="VFN38_10160"
                     /EC_number="2.3.1.263"
                     /inference="COORDINATES: protein motif:HMM:NF040739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-oxopentanoate thiolase subunit OrtA"
                     /protein_id="HET9012166.1"
                     /translation="MSTGTWVEIERVVLEPAERAPTLPEDTRQVPYLLRASGFLLDDA
                     ALGEEASVRTLIGRELTGTLTTINPSYSHSFGETVQELLDIGLDREDGK"
     gene            complement(2337..>2519)
                     /locus_tag="VFN38_10165"
     CDS             complement(2337..>2519)
                     /locus_tag="VFN38_10165"
                     /inference="COORDINATES: protein motif:HMM:NF040257.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012167.1"
                     /translation="YGKPEIHMAITPEIAGGVATIGIAVNVIPHLVAASPGLKRMIDL
                     PVPGALMGPSAYSRLT"
BASE COUNT          358 a          881 c          829 g          451 t
ORIGIN      
        1 ggccgccatc cgcatgcgac gcaggtcgtc ctcgaaacgc ccggacgcga tctcggtgct
       61 gacgctgctc gcgggttgcg gatcgatcgc ctcgaagtac ttcgccgccg gcagcgggat
      121 gctccgctcg agcggctcgg acatgtcgtg gaagtggaac gggcccatgt cgacaccgcc
      181 gggcgcaacg gtgcgccagg tccagccctt ccgcggcggg cggtagctct cgaggtcctc
      241 caggatcgcc tcgacgtcga gcttgtcgtc cggcttcatc gcgcagtctc cagcgccaag
      301 ccgccgagca cttcgtcgtc ctcgaggatc gcggccaccg cgccgatcac gtccgtgccc
      361 cgctgctcgg caaccttgag cacgacctgc ccggcgccct tgccgagcag cccggcacgc
      421 gcgatgcggt cgacggccgc gtgcgcgctc aggctgtcga cgcccatgcg cagcagcacg
      481 gaccgctcga tcgacggtga cgtgtgcgta cgcgcgagct cgacgaccgg ctccatcacc
      541 tgctcgcaca gctgccagaa ccgttccttg agctgctcgt ccgtgagctg cctcagctcg
      601 ctgcgacgtt gctcgaacct ggcgatgcgc tcatccgtca tgcaatcgct ctccgcaccc
      661 agtccgtgtc gacgttgatg tccgcagcga tgaacgcgac gtcctcctcg tcccagagct
      721 ccaccgggtg cgccttcgcg gcgttgcgca cgtagctcga ccgcaggtga tccagctcct
      781 gcggcctgcc ccacacctgc tcgagcttgt cggggatgac gatcgccttg cccgggacgt
      841 tgtccttggg gtcaccgcgc cgcacctcga ttccgttctc acgagcgaac gcgagctggc
      901 tgttgtggtg cttgccggcg ccggtgtact ccgtctcctg cactaccacg atctggtcac
      961 gctccatctg gcgggccagg gtgacggctg cggtcaggct ggtgttgccg gcggggccgc
     1021 gttcgagtcc ttccagcttc gcgagcagct ccgttacgta gaacacctca ccctgcgtca
     1081 cgagctggta ctcgtccatg tagcgcagcg agcgcgccgc gttgcgcggc acgtcgacgc
     1141 gatcgggcca ggtggcgaag ggaacgccga agccggtgtg gccggtggtg aaggacttgc
     1201 ggttgaagtc gtcatcggag gccatgtgca ggccgccaag gtcgacagag caggcaacta
     1261 tccggctttg cgtgcagccc gcggcacgca ggccacgcgc cgtgcccgtc agattgccgc
     1321 caccggcgtg cgtgatgacc accgcatcgg ggtccttgcc atagcgctcg cggaccccgg
     1381 cagcgacctc gagcccaagc gtctcgatgc cccggacccc gaacggcgtg tagaggctgg
     1441 cgttgaagaa gccggtctcc tcgagtgtgc gcagcagcat gtagaagagc tccgggccga
     1501 cgctcatctt cagcacctcg gcgccgtagg cctcgcaggc gcggctcttc tcgacgatct
     1561 cgggctgtcc gagaccgcgt gagtcgaaga cctcttggac gatgatgcac ttcaggccgc
     1621 gctgtgcggc ctgcgaggca acggcggcgc cgtagttgcc gctcgtggca gcgaccatgc
     1681 cctcgtagcc cttgcgggcc gcctcgtagg cgctgatcga ggcgcgccgc gccttgaagc
     1741 tgccggaagc gttcgccgcc tcgtccttga gcaggatcct cgcgcccttg ccggacccgc
     1801 aactgcggcg cacggcttcg gtgaggttgc gcaactcgac gagcggcgtg gtcccgacct
     1861 tcgtctcgcg ctggatccgc gcaatgtcgt cgtggctgta gcccgtctcc tccatcatgc
     1921 gctcgtagtc gaacgcgatc gggctgtgga cgaaggcgtc gtagtcgatg cccagcgccg
     1981 ccttcatgat ctcgttgctg cgcgccatga ccgcggcgta ggagatgtcg acgacgctca
     2041 tttcccgtcc tcccggtcga ggccgatgtc gagcagctcc tgcacggtct caccgaagct
     2101 gtggctgtag ctcgggttga tcgtcgtgag cgtcccggtc agctcgcgtc cgatcagcgt
     2161 gcgtacgctc gcctcttcgc cgagtgcggc gtcgtcgagc aggaatccgg acgcgcgcag
     2221 caggtatggc acctggcgcg tgtcctcagg aagggtgggt gcacgctcgg cgggctccag
     2281 caccacccgc tctatctcga cccatgtgcc tgtgctcacg gtgctcatcg gccggctcat
     2341 gtcaaccgcg agtacgcgct cggacccatg agcgcaccag gcaccggaag gtcgatcatg
     2401 cgcttgagcc ccggcgaggc cgcgaccaga tgcgggatga cattgaccgc gatgccgatc
     2461 gtcgcgacgc ctccggcgat ctccggcgtg atcgccatgt ggatttcggg cttgccgta
//
LOCUS       DASSYW010000634         2097 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1016088, whole genome shotgun sequence.
ACCESSION   DASSYW010000634 DASSYW010000000
VERSION     DASSYW010000634.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2097)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2097)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2097
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1016088"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..285
                     /locus_tag="VFN38_10170"
     CDS             <1..285
                     /locus_tag="VFN38_10170"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HET9012168.1"
                     /translation="EAREETGLTDLVFSWGHAFRETAPYAGGKVARFYIAETRNERIE
                     LPVSRELGRPEHHEWRWVSFDDARKLIAPRLQFIVDWVESEARRDAERAR"
     gene            complement(318..839)
                     /locus_tag="VFN38_10175"
     CDS             complement(318..839)
                     /locus_tag="VFN38_10175"
                     /inference="COORDINATES: protein motif:HMM:NF038027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TssQ family T6SS-associated lipoprotein"
                     /protein_id="HET9012169.1"
                     /translation="MTIDPSAVHRGWMAVVLALACSACATPTAPEPVVPASPPPKQSA
                     TPAVAARPPDLRSAAPREPAAATREKSRAELDFERGVKSYEDGDYKSAERQLKSALSL
                     GLPAFPDQAIAHKYLAFIACASGLQRSCRDEFRKALEADGNFNLAPAESGHPVWGPVF
                     RSVKAEMAKPRSK"
     gene            complement(836..>2097)
                     /locus_tag="VFN38_10180"
     CDS             complement(836..>2097)
                     /locus_tag="VFN38_10180"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HET9012170.1"
                     /translation="AEEFQKRFDREARSAGRLNHPNIVTIYDVGNTGDVAYFAMELLE
                     GQSLRDILDSGVVLPPSSIADIAAQVADGLASAHQAGVIHCDIKPANIVVLASGLVKI
                     TDFGVAMLPTGSRSFIGSVVGSPKYIAPERVVGRPVDARSDVFSLGAVLYELLTGTPP
                     FAGTALDEILHNVINHSPEPPTSRNRGLPAAFDAIVARALAKHPDDRYQSASEMSADL
                     RQLALVGPRDAFGAAAVKERPAPTLPGDSTVTAAFDDDAAPERRGWRSPIVRYGMPAA
                     LLVSVAAWAMYVAQAPSPVPIASVRPLDPQREIPSLPLAVPATSEPEADTKGAGAPAA
                     VVATPAPPAASAAKPVARARVGFAVTPWGEVYINGRKTGITPPLNEIRLPPGKHTIEI
                     RNTTFPPHRQTVDLRADASVRIKHKFE"
BASE COUNT          313 a          711 c          757 g          316 t
ORIGIN      
        1 gaagcacgcg aggagacggg tttgaccgac ctcgtatttt cctggggcca cgcgttccgc
       61 gagactgcgc cctacgccgg ggggaaggtc gcgcgcttct acattgccga aacgcgcaac
      121 gagcgcatcg aattgccggt gagccgggag ctcggccgac ccgagcacca cgagtggcgc
      181 tgggtgagct tcgacgacgc gcgcaaactc atcgcaccgc gattgcagtt catcgtcgat
      241 tgggtggaat ccgaggcccg gcgcgacgcg gagcgcgcgc gctaggaccc tcccgcgtca
      301 acgggcggcg tggcgaccta tttcgaccgc ggcttcgcca tctcggcctt gacgctgcgg
      361 aacacgggcc cccagaccgg atggcctgac tcggcgggcg caaggttgaa gttgccgtcg
      421 gcctcgagcg ccttgcggaa ctcgtcgcgg cacgagcgct gcagtcccga agcgcaggcg
      481 atgaacgcca ggtacttgtg cgcgatggcc tggtcaggaa aggccggcag gccgagcgaa
      541 agcgcggact tgagttgccg ctccgcgctc ttgtagtcac cgtcctcgta gctcttcacg
      601 ccgcgctcga agtccagctc ggcacggctc ttttcgcgcg tcgcggcggc gggttcgcgc
      661 ggggcggcgg accgcaaatc gggaggccgc gcggcaacgg ccggagtggc actttgcttc
      721 ggcgggggac tcgcgggcac gacgggttcc ggcgccgtgg gcgtcgcgca cgccgagcac
      781 gcgagcgcca acacgacggc catccagccg cgatgcacgg cggacgggtc gatggtcatt
      841 cgaacttgtg cttgatccgc acgctggcat cggcccgcaa gtcgacggtc tggcgatgcg
      901 gcgggaaggt cgtgttgcgg atctcgatcg tgtgtttgcc cggcggcagc cggatttcat
      961 tgagcggcgg cgtgatgccc gtcttgcgtc cgttgatgta cacctcgccc cacggcgtca
     1021 ccgcgaaccc cacgcgggcc cgcgcaacgg gcttcgctgc cgacgcagcc ggaggcgccg
     1081 gcgtcgccac gaccgcggcc ggcgcgccgg cgcccttggt gtccgcctcc ggttcgctcg
     1141 tggccggcac tgccaagggg agggacggta tctcacgctg cggatccagc ggccggacac
     1201 tcgcaatggg caccggactc ggcgcctgcg cgacgtacat cgcccaggcg gcgacggaca
     1261 ccagcagcgc cgcgggcatg ccataacgca cgatcgggct gcgccatccg cggcgctcgg
     1321 gcgcagcatc gtcgtcgaac gcggccgtca cggtcgaatc gcctggcagc gtcggcgccg
     1381 ggcgctcttt cacggccgcc gcgccgaagg cgtctcgcgg ccccaccagc gcgagctggc
     1441 gcaggtctgc ggacatctcg ctggcgctct ggtaacggtc gtccggatgc ttggccagcg
     1501 cccgcgcgac gatcgcgtcg aacgctgccg gcaagccgcg gttgcggctg gtggggggtt
     1561 cgggcgagtg gttgatcacg ttgtgcagaa tctcgtcgag cgcggtcccc gcgaacggcg
     1621 gcgtcccggt cagcagctcg tagagcacgg cgccgagcga gaacacgtcc gagcgcgcgt
     1681 cgacggggcg ccccaccacg cgctcgggcg caatgtactt gggcgagccg accacactac
     1741 cgatgaacga gcgcgagccg gtcggcagca tcgcgacgcc aaagtcggtg atcttcacca
     1801 gtccgcttgc gagcacgacg atgttcgcgg gcttgatgtc gcagtggatg acgcccgcct
     1861 ggtgcgcgga ggcgagcccg tccgcgacct gcgcggcgat gtcggcgatg gacgagggcg
     1921 gcagcacgac acccgagtcc aggatgtcgc gcagcgactg tccctcgagc agctccatgg
     1981 cgaagtaggc cacatcgccg gtgttgccga catcgtagat ggtgacgatg ttcgggtgat
     2041 tgagacgccc cgccgagcgc gcctcgcggt cgaagcgctt ctggaactcc tcggcct
//
LOCUS       DASSYW010000635         3602 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_593994, whole genome shotgun sequence.
ACCESSION   DASSYW010000635 DASSYW010000000
VERSION     DASSYW010000635.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3602)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3602)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3602
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_593994"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..207)
                     /locus_tag="VFN38_10185"
     CDS             complement(<1..207)
                     /locus_tag="VFN38_10185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012171.1"
                     /translation="MPNDTETPGALDALAQTPTSRRAFLRAASLTAVGAGALAACNKT
                     SAQKPAATTAAGATGATGGTMGAHD"
     gene            426..1544
                     /locus_tag="VFN38_10190"
     CDS             426..1544
                     /locus_tag="VFN38_10190"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing sensor histidine kinase"
                     /protein_id="HET9012172.1"
                     /translation="MNRVLPPQLFSGLLAIAADAVIAVDNEQRIIFFNEGAERIFGWS
                     AQEVGGQYLEVLLPVRYRAAHRGHVHGFGEAHGRARLMGERQQISGLRKSGEEFPAEA
                     AIERIEIEGRNIYAAVLRDISARQRAEDLLHQAIEARDDMMGIVSHDLRNPANAVKML
                     ARSIVEGESGRALAADVRERVEVIRQAAEQMDALIQDLLDITRLEAGRLVVSPREVEL
                     GSLIARSVDALRPLADAGGIALRAAVRDPLPVLRVDPDRMTQVLSNVIGNAIKFTPAG
                     GSVTLGAGVTAGEIEIDVTDTGEGIPAAQLPRVFDRFFQASLTSRAPRHGAGLGLPIA
                     RGIVEAHGGRIWVESSPGVGTTVRFTLPLDARPPASRA"
     gene            1618..2391
                     /locus_tag="VFN38_10195"
     CDS             1618..2391
                     /locus_tag="VFN38_10195"
                     /inference="COORDINATES: protein motif:HMM:NF022750.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3108 domain-containing protein"
                     /protein_id="HET9012173.1"
                     /translation="MRLATLSAIAFGLLAAIPAPRDARAQATERLPFAPGERLTFRGR
                     VHTGVSGGGTLWVEGPVDVRGTSTWLLHSDMEGRVGPLRATDRNASWLDPIRMTALRY
                     TSRERHIVSRHDDAIEIFPGERRWSSAAGLEGETVGPAPLDELSFLYYVRTLPLGDDT
                     TLTLARHFDVARNPTVVAVVGREEIDVPAGRFRAVVVEMRVRDARRYRGEGTIRIHLS
                     DDACRLILRLESRVPDAGPATLSLQSYEGVRPTCTAKVP"
     gene            2718..3308
                     /locus_tag="VFN38_10200"
     CDS             2718..3308
                     /locus_tag="VFN38_10200"
                     /inference="COORDINATES: protein motif:HMM:NF016176.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HET9012174.1"
                     /translation="MRSSITHAFAAALILAPVGIASEQLAVQPQSKMWVEGTSTIRSF
                     QCSVPDFTLTVHADGTGAVGKVLEGQKPVRTVELAVPAEKLDCGNGTMNDHMREAIKA
                     GENPTIRFSLASYEVAKAGDGVEGTLRGTLALGGQQHPIDVVAVATDAGNGAMRIVGG
                     YEVALSAFDLKRPSLMFGRIKVGDKVQVKFDLVLKS"
     gene            3364..>3602
                     /locus_tag="VFN38_10205"
     CDS             3364..>3602
                     /locus_tag="VFN38_10205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012175.1"
                     /translation="MTATRSYRLLAAAALLAATPASVHAQTGNTTRDSQYVVAPAGVA
                     RDSGGKADSLAAAKKARMRLPRYIAPAAEIQYFRPA"
BASE COUNT          520 a         1288 c         1274 g          520 t
ORIGIN      
        1 gtcgtgcgcg cccatcgtgc cgccggtggc gccggtggcg ccggccgcgg tcgtggccgc
       61 cggcttctgg gcggaggtct tgttgcaggc agcaagggcg cccgcgccga ccgcggtcag
      121 cgacgcggcg cgcaggaagg cgcgccgcga cgtgggggtc tgcgcgagcg cgtcgagcgc
      181 gccgggagtc tcggtatcgt tcggcatgat ctctcggggt ctgggttgag ggacagacgg
      241 aacttcggcc gagacggggt tgcgctctgt caggcggaaa agggaatttt ccggacgccg
      301 ctcctgacta ctttgtaagg gaaactcccg acacgccgcg tccgtccgtg ggccggagcg
      361 ggagacctcc gtccccgtgc gccgactcga tgaaagacgc tgctgccgcc gccgctcgag
      421 cggccatgaa ccgggtcctg ccgccgcagc tcttctcggg cctgctcgcc atcgccgcgg
      481 acgcggtgat cgccgtggac aacgaacagc gcatcatctt cttcaatgaa ggagcggagc
      541 ggatcttcgg ctggtcggcg caggaggtgg gcggccagta tctcgaagtc ctgcttccgg
      601 tccgctatcg cgccgcgcat cgcggccacg tccacggctt cggggaggcg cacggccgcg
      661 cccgactgat gggggagcgc cagcagatca gcggtctccg gaagtcgggc gaggagtttc
      721 ccgcggaggc ggccatcgag cgcatcgaga tcgagggccg gaacatctac gccgcggtgc
      781 tgcgggacat cagcgcgcgg cagcgcgccg aggacctgct gcatcaggcg atcgaggcgc
      841 gcgacgacat gatggggatc gtgtcacacg acctgcgcaa cccggcgaac gcggtgaaga
      901 tgctggcgcg cagcatcgtc gagggggagt ccggccgcgc gctcgccgcc gacgtgcgcg
      961 agcgcgtcga ggtcatccgg caggccgcgg agcagatgga cgcgttgatc caggacctgc
     1021 tcgacatcac gcggctcgaa gccggacgcc tcgtggtctc tccgcgggaa gtcgagctgg
     1081 gctcgctgat cgcgcgcagc gtcgacgcgc tccgcccgct cgccgacgcc ggcggcatcg
     1141 cgctgcgcgc ggcggtgcgc gacccgcttc cggtcctgcg cgtcgatccc gatcggatga
     1201 cgcaggtgct ctcgaacgtc atcggcaacg ccatcaagtt cacccccgcc ggcgggtcgg
     1261 tgaccctggg cgcgggggtg accgccggcg agatcgagat cgacgtcacc gatacgggcg
     1321 aggggattcc cgcggcgcag ctgccgcgcg tgttcgaccg cttcttccag gcctcgctca
     1381 cctcgcgagc cccgcgacac ggcgcgggac tcggcctgcc gatcgcccgc ggcatcgtcg
     1441 aggcgcacgg gggacgcatc tgggtggaga gcagccccgg cgtcggcacg accgttcgct
     1501 tcaccctgcc actggacgcc cgcccgcccg catcgcgcgc ctgaccgggg atcttccgcc
     1561 ggcccttgcg gaaaattccc gacttcggcg gcacggccgc gggggcatcc tgcgaccgtg
     1621 cgcctcgcca cgctgtccgc catcgccttc gggctgctcg ccgcgatccc tgcgccccgc
     1681 gacgcgcggg cgcaggcgac cgagcgtctc ccgttcgcgc cgggtgagcg cctgaccttc
     1741 cgggggcgcg tgcacaccgg cgtctcgggt ggcgggacgc tgtgggtcga ggggccggtc
     1801 gacgtgcgcg gcacgagcac ctggctgctg cactccgaca tggagggccg cgtcggtccg
     1861 ctgcgtgcga ccgaccgcaa cgcctcgtgg ctcgatccca tccgcatgac ggcgctgcgc
     1921 tatacctcgc gcgagcggca catcgtctcc cggcacgacg acgcgatcga gatcttcccc
     1981 ggcgagcggc gctggagctc cgcggccggt ctcgagggcg agaccgtcgg accggccccg
     2041 ctggacgagc tctccttcct gtactacgtg cggaccctcc cgctcggcga cgacacgacg
     2101 ctcacgctcg cgcgccactt cgacgtcgcg cggaatccca cggtggtggc ggtggtgggt
     2161 cgcgaggaga tcgacgtgcc ggcggggcgc ttccgcgccg tggtggtgga gatgcgcgtg
     2221 cgcgacgcgc gccggtatcg cggcgagggc acgatccgca tccatctctc ggacgacgcc
     2281 tgccggctga tccttcgcct cgagagccgc gtgcccgatg cggggccggc cacgctgtcg
     2341 ctgcagtcgt atgaaggcgt gcggccgacg tgcacggcga aggtgccgta gaccggaggc
     2401 cgggaggccc ggaggcacgg aggtccgtat ggaagtcggg ccatcgggcc attgggccat
     2461 cgggccatcg ggccatcgcg ccatcgcgcc atcgggccat cgcgccatcg ggccatcggg
     2521 ccatcgggcc atcgcgtcat cgggccatcg cgccgtcggg gcactggaat atcgtcagga
     2581 ctttccccca ccgcgcaggg cggaaagccc ccgaaacatt cagtcgatcc cccggcggat
     2641 gcccgatccc gcgagccgta tcctcactcc atgacggcga atgaacgccg ccacgagacc
     2701 gagagagata cgacatcatg cgctcctcca tcacgcacgc cttcgccgcc gcgctgatcc
     2761 tcgcgccggt cggcatcgcc agcgagcagc tcgccgtcca gccgcagagc aagatgtggg
     2821 tcgagggcac gtccacgatc cgcagcttcc agtgctccgt gccggacttc acgctgacgg
     2881 tccatgcgga cggcacgggc gccgtcggca aggtgctcga gggccagaag cccgtccgca
     2941 ccgtggagct ggccgtcccg gccgagaagc tcgactgcgg caacgggacg atgaacgatc
     3001 acatgcgcga ggcgatcaag gcgggagaga atcccaccat caggttctcg ctcgcgtcgt
     3061 acgaggtcgc gaaggccggc gacggcgtcg aaggcacgct gcgcggcacg ctcgccctgg
     3121 gtggccagca gcatccgatc gacgtcgtcg ccgtcgcgac cgacgccggc aacggagcga
     3181 tgcgcatcgt gggcggctac gaggtcgcgc tcagcgcatt cgacctcaag cggcccagcc
     3241 tgatgttcgg ccgcatcaag gtcggtgaca aggtgcaggt gaagttcgat ctcgtgctca
     3301 agagctgatc gatacgtcct tccgttcctt ccatctccca cacgtcctct cgaggatcat
     3361 tccatgaccg ccacgcgctc ctaccgactg ctcgccgctg cggcgctgct cgccgcgact
     3421 ccggcctcgg ttcatgcaca gacgggcaac accacccgcg actcccagta cgtggtggcg
     3481 ccggccggcg tcgcccggga ctcgggtggc aaggccgaca gcctcgccgc cgcgaagaag
     3541 gcccggatgc gcctgccgcg ctacatcgcg ccggccgccg agatccagta cttccgcccc
     3601 gc
//
LOCUS       DASSYW010000636         2457 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_9724, whole genome shotgun sequence.
ACCESSION   DASSYW010000636 DASSYW010000000
VERSION     DASSYW010000636.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2457)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2457)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2457
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_9724"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..589)
                     /locus_tag="VFN38_10210"
     CDS             complement(<1..589)
                     /locus_tag="VFN38_10210"
                     /inference="COORDINATES: protein motif:HMM:NF018479.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low temperature requirement protein A"
                     /protein_id="HET9012176.1"
                     /translation="MTARIRRPHVRTVLRDDGRVSPLELFFDLVFVLALTQCTALMAH
                     EPTWVGLLKGLAILGVMWWAWVGYTWLCSVVDPEEGSVRIAMFTAMAGLLVVALAIPE
                     AFGENALIFAIAYGLVRAMQVALLLIAGRDDEGLRRSAAGLMVSTAIGVGLLIAASFA
                     DVVAAAAGCRFGDCSHAGEPGCGVTAAIEAGELAPE"
     gene            complement(616..1638)
                     /gene="rsgA"
                     /locus_tag="VFN38_10215"
     CDS             complement(616..1638)
                     /gene="rsgA"
                     /locus_tag="VFN38_10215"
                     /inference="COORDINATES: protein motif:HMM:TIGR00157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome small subunit-dependent GTPase A"
                     /protein_id="HET9012177.1"
                     /translation="MNLSTLGWDGGWAEALADHDDRALVPARVTAVHRGRYAVRGDDI
                     DALVPAAGALEAAARGPAELPATGDWVALRGGEAIRHVLPRRTLLARADDDAREEALA
                     ANVDLCLVTTSLDMDLNLRRLERFLALARAGGVEVLVVCTKGDLARDPIAETAAVAAA
                     TGAEAIVISARDGWGVSALRARLRPGRTHALVGMSGVGKSTLVNLLLGEERQRTLEVR
                     ASDARGRHATAHRELFALDDGALLIDTPGLRLPRMTSAAGVQDAFADVVAAAAGCRFG
                     DCSHAGEPGCGVTAAIEAGELAPERLAAMRKLEREGLSAAERRRRSKAFHKRHRKEIR
                     ARTRHR"
     gene            1866..2441
                     /locus_tag="VFN38_10220"
     CDS             1866..2441
                     /locus_tag="VFN38_10220"
                     /inference="COORDINATES: protein motif:HMM:NF039480.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6529 family protein"
                     /protein_id="HET9012178.1"
                     /translation="MAAAAEPAPEQPQPIGGTGVLAAGAMGAMVAIGLGIYGHIHGPQ
                     TDLAITLGFADTITMKVWLSSASVLFALLQVFTALWMYGKLPISSHPSWLGDAHRISG
                     RLAFLISLPVAYHCLYQLAFQDTTTRVFAHSLLGCLFYGAFATKVTIIHMPRRAGVWL
                     PIAGGLVFTVLVATWVTSGLWFITTSGIPSP"
BASE COUNT          324 a          915 c          906 g          312 t
ORIGIN      
        1 gctccggcgc gagctcgccc gcctcgatcg cggccgtcac gccgcagccc ggctcgcccg
       61 cgtgcgagca gtcgccgaag cggcagcccg cggccgctgc cacgacgtcg gcgaacgagg
      121 cggcgatgag caggccgacg ccgatcgcgg tcgagaccat caggccggcc gccgagcggc
      181 gcaggccctc gtcgtcgcgg ccggcgatca gcagcagcgc gacctgcatc gcgcgcacca
      241 gcccataggc gatcgcgaag atcagcgcgt tctcgccgaa cgcctccggg atcgccagcg
      301 caacgaccag cagcccggcc atcgcggtga acatcgcgat ccggaccgag ccctcctccg
      361 ggtcgaccac gctgcacagc cacgtgtagc cgacccacgc ccaccacatc acgccgagga
      421 tcgccaagcc cttcagcagg cccacccagg tgggctcgtg cgccatcagc gccgtgcact
      481 gggtcagcgc gagcacgaac acgagatcga agaagagctc gagcgggctg acccggccgt
      541 cgtcgcgcag cacggtgcgg acgtgcgggc ggcggatgcg ggccgtcatg ctcacggccc
      601 ggcatcctct caccctcacc ggtggcgcgt gcgcgcccgg atctccttgc gatggcgctt
      661 gtggaacgcc ttcgagcgcc gccggcgctc ggcggcgctc aggccctcgc gctcgagctt
      721 gcgcatggcg gccagccgct ccggcgcgag ctcgcccgcc tcgatcgcgg ccgtcacgcc
      781 gcagcccggc tcgcccgcgt gcgagcagtc gccgaagcgg cagcccgcgg ccgctgccac
      841 gacgtcggcg aacgcgtcct ggacgcccgc cgcggacgtc atccgcggca gccgcagtcc
      901 cggcgtgtcg atcagcagcg cgccgtcgtc gagcgcgaac agctcgcggt gcgccgtggc
      961 gtggcgcccg cgcgcgtcgg aggcgcggac ctcgagcgtg cgctggcgct cctcccccag
     1021 caggaggttc acgagcgtgc tcttgccgac gccggacatg cccacgagcg cgtgcgtgcg
     1081 gccgggccgc aggcgtgcgc gcagcgcgct cacgccccag ccgtcgcgcg cggagatcac
     1141 gatcgcctca gcgccggtcg ccgccgccac ggcggccgtc tcggcgatcg ggtcgcgggc
     1201 gaggtcgccc ttggtgcaga cgaccaggac ctccacgccg ccggcgcgcg cgagcgcgag
     1261 gaagcgctcc agccggcgga ggttgagatc catgtcgagc gaggtggtga ccaggcacag
     1321 gtcgacgttg gcggccagtg cctcctcgcg cgcgtcgtcg tcggcgcgcg ccagcagcgt
     1381 gcgccggggc agcacgtggc ggatcgcctc gccgccgcgc agggcgaccc agtcgcccgt
     1441 cgcgggcagc tcggcggggc cgcgcgcggc ggcctcgagc gcgcccgcgg cgggcacgag
     1501 ggcgtcgatg tcgtcgccgc ggacggcgta gcgaccgcgg tgcactgcgg tgacgcgcgc
     1561 cgggaccagc gcgcggtcgt catggtcggc gagggcctcg gcccatccgc cgtcccaccc
     1621 gagggtggag aggttcaact cggagctcct tcgctttaag gggaacggtg cggcgtggac
     1681 ggccgcgcgg cgagcgagga agctcagggc cgcgcggcgg actcaggagg ccgcggcgaa
     1741 ggtggggtgc tgtcgcgagt tggagagcac gaaggcgaac ggtagggcac ccccggccgg
     1801 gcgtccagta cggctggcac gaaggttgcg cgggcggcgc cggttcggag aggatcgggt
     1861 cgcccatggc cgccgccgca gagcccgcgc cggagcagcc ccagccgatc ggcggcaccg
     1921 gggtgttggc cgcgggcgcg atgggggcca tggtcgcgat cgggctcggg atctacggcc
     1981 acatccacgg cccccagact gacctcgcca tcacgctcgg cttcgcggac acgatcacga
     2041 tgaaggtgtg gctgtccagc gcgtcggtgc tgttcgcgct gctccaggtc ttcacggcgc
     2101 tgtggatgta cggcaagctg ccgatctcga gccatccgtc gtggctcggc gacgcgcacc
     2161 ggatctccgg gcggctcgcg ttcctgatca gcctgcccgt cgcctaccac tgcctctacc
     2221 agctcgcgtt ccaggacacg acgacgcgcg tgtttgccca ctcgctgctc ggctgcctgt
     2281 tctacggcgc gttcgccacg aaggtgacga tcatccacat gccgcggcgg gcgggcgtct
     2341 ggctcccgat cgccggcggg ctcgtcttca cggtgctcgt ggcgacctgg gtgacgagcg
     2401 ggctgtggtt catcaccacg agcgggatcc cctcgccctg atgctgcacg cgatcga
//
LOCUS       DASSYW010000637         2418 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1681130, whole genome shotgun sequence.
ACCESSION   DASSYW010000637 DASSYW010000000
VERSION     DASSYW010000637.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2418)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2418)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2418
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1681130"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..772)
                     /locus_tag="VFN38_10225"
     CDS             complement(<1..772)
                     /locus_tag="VFN38_10225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HET9012179.1"
                     /translation="MPSTPVQPLAARQRTLGALGEGPFDVLVVGGGITGAGVARDAAM
                     RGLRTALVEREDFASGTSSRSSRLVHGGVRYLEHGQLGLVFESSAERRTLRRIAPHLV
                     RPLAFVWPVYAGARVSRWQLAAGLALYDLLALFRNVGRHESLSRRSVLTREPRLRADA
                     LVGGARYWDAATDDARLTLATVRSAIGAGAVVLNHARVISLAKEEGRVTGARVVDAVT
                     GTGVDVAARVVVNATGPWSDSVERMANGGAAPGVRGSKG"
     gene            807..2102
                     /gene="fadI"
                     /locus_tag="VFN38_10230"
     CDS             807..2102
                     /gene="fadI"
                     /locus_tag="VFN38_10230"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase FadI"
                     /protein_id="HET9012180.1"
                     /translation="MPTFGSPGRRVAIVAGVRTPFARSGTTLKSLSAIELGKRAVAEL
                     IQRSEIDGKLVEALVYGTVVPSVVAPNIAREVSLLPMLPKGVQSFTVGRACASANQAI
                     TDAADQIALGHADVIIAGGAESLSNVPILHSRGMSDALVAASRAKSFAGRVRALAKVR
                     PRDLVPITPAIAEPSTGETMGQSAEKMAKINAIPRAEQDHFALRSHRLAAAGTEDGRL
                     TAEIAPMFVPPTFTPMTADNGIRADSTMEQLRALKPVFDRTYGTVTAGNSSPLTDGAS
                     AVLLMSEERAKSLGYTPLAYIRSYSYAALDPGEQLLMGPVLAAPVALARAGLDLKEID
                     LIEMHEAFAAQVLCNLQGFESREWAERAGFSAPVGEVDRSKLNVMGGSIAIGHPFGAT
                     GGRILTTLCNELARRGGQFGLMTVCAAGGMGHAMVIERT"
     gene            2099..>2418
                     /locus_tag="VFN38_10235"
     CDS             2099..>2418
                     /locus_tag="VFN38_10235"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HET9012181.1"
                     /translation="MTSALRLEHVDGIAVVTIDLPGEPVNKVTAGLRADFATLFDQIV
                     ADPTIRGVVLASGKPDTWIAGADIDEFLTLQGSVEAEALSRGGQELLARLESLAIPVV
                     AAIHG"
BASE COUNT          346 a          930 c          827 g          315 t
ORIGIN      
        1 cgcccttgct gccgcgcacc cctggtgccg cccctccgtt cgccatgcgc tccacgctgt
       61 cgctccacgg tccggtggcg ttgaccacca cccgggcggc gacgtccacg ccggtgccgg
      121 tgaccgcgtc caccacgcgc gcgccggtca cccggccctc ctccttcgcg agggagatga
      181 cgcgcgcatg gttgagcacc accgcgcccg cgccgatcgc cgaccggacg gtggcgaggg
      241 tgagccgggc gtcgtcggtg gcggcatccc agtatcgcgc accacccacc agcgcgtcgg
      301 cgcgcaggcg cggctcgcgc gtgaggacgc tgcggcggct cagcgactcg tgccggccca
      361 cgttgcggaa cagcgccagc aggtcgtaga gcgcgagccc cgcagcgagc tgccagcgcg
      421 acacgcgggc gcccgcgtac accggccaga cgaaggcgag gggccgtacc aggtgcggcg
      481 cgatgcgccg cagcgtgcgc cgttcggcgc tggactcgaa caccagaccg agctggccat
      541 gctcgaggta ccgcacgccg ccgtggacca gccgcgacga ccggctggag gtgccgctgg
      601 cgaagtcctc ccgctcgacg agggcggtgc gcagcccccg catcgcggca tcgcgcgcca
      661 ctcccgcgcc cgtgatcccg ccccccacga cgagcacgtc gaacgggccc tcgccgaggg
      721 cgccgagcgt acgttgacga gcggccaggg gctgcacggg agtcgatggc actccccaga
      781 agctaattcg cgcgtagctt ccagccatgc ctaccttcgg ctcacccggc cgccgcgtcg
      841 ccatcgtcgc cggcgtccgc acacccttcg cccgctccgg cacgaccctc aagtcgctct
      901 cggccatcga gctgggcaag cgcgcggtcg ccgagctgat tcagcgcagc gagatcgacg
      961 gcaagctcgt ggaggcgctc gtgtacggca ccgtggtgcc gtcggtcgtg gcgccgaaca
     1021 tcgcgcgcga ggtctcgctc ctccccatgc tgcccaaggg agtgcagtcc ttcaccgtcg
     1081 gccgcgcgtg cgcctcggcg aaccaggcca tcaccgacgc cgccgaccag atcgcgctcg
     1141 gccacgccga cgtcatcatc gccggggggg cggagtcgct ctcgaacgtc cccatcctgc
     1201 actcgcgcgg aatgagcgac gccctcgtgg ctgcctcgcg cgcgaagagc ttcgccggcc
     1261 gggtgcgggc gctcgcgaag gtgcgcccgc gcgacctcgt ccccatcacg ccggccatcg
     1321 ccgagccgtc caccggcgag acgatgggcc agtccgccga gaagatggcg aagatcaacg
     1381 ccatcccgcg cgccgagcag gaccacttcg cgctgcgctc ccaccgcctc gccgcggccg
     1441 gcacggagga cgggcggctc acggccgaga tcgcgcccat gttcgtgccg cccacgttca
     1501 cgccgatgac ggcggacaac ggcatccgcg ccgactccac catggagcag ctccgcgcgc
     1561 tgaagccggt gttcgatcgc acctacggca cggtgacggc cggcaactcg tcgccgctca
     1621 ccgacggcgc gagcgcggtg ctgctcatga gcgaggagcg cgcgaagtcg ctcggctaca
     1681 cgcccctggc gtacatccgg agctacagct acgccgcgct ggatcccggc gagcagctcc
     1741 tcatggggcc cgtgctcgcc gccccggtgg cgctggcgcg ggcggggctg gatctgaagg
     1801 agatcgacct gatcgagatg cacgaggcgt tcgccgccca ggtgctgtgc aacctgcagg
     1861 gcttcgagtc ccgggagtgg gcggaacgcg ccggcttcag cgcgccggtg ggcgaggtgg
     1921 accgctcgaa gctcaacgtg atgggcggct ccatcgccat cggccatccc ttcggggcca
     1981 ccggcggccg catcctgacg acgctctgca acgagctcgc acggcgcggc ggccagttcg
     2041 gactcatgac cgtctgcgcc gccggcggga tgggccacgc catggtgatc gagagaacat
     2101 gacttccgcc ctcaggctcg agcacgtcga cggcatcgcc gtcgtcacga tcgaccttcc
     2161 cggcgagccg gtgaacaagg tgacggccgg cctccgcgcc gacttcgcca cgctgttcga
     2221 ccagatcgtc gccgatccca ccatccgcgg cgtcgtcctc gcctcgggca agccggacac
     2281 ctggatcgcc ggcgccgaca tcgacgagtt cctcacgctg cagggctccg tcgaagccga
     2341 agcgctcagc cgcggaggcc aggagctgct ggcgcggctg gagtcgctcg cgatccccgt
     2401 cgtcgcggcc atccatgg
//
LOCUS       DASSYW010000638         2214 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_669984, whole genome shotgun sequence.
ACCESSION   DASSYW010000638 DASSYW010000000
VERSION     DASSYW010000638.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2214)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2214)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2214
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_669984"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..439
                     /locus_tag="VFN38_10240"
     CDS             <1..439
                     /locus_tag="VFN38_10240"
                     /inference="COORDINATES: protein motif:HMM:NF015085.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome c maturation protein CcmE"
                     /protein_id="HET9012182.1"
                     /translation="TKFLIGGAVVLGTAGYLMATSIKDTGMYYLTPTELATKLDADPG
                     FRNTGVKVGARVVPGSIQRVPGGREYAFRVTDGAKVFPVVYRGIAPDTFTDGVDVVVE
                     GRMGEDGTFRATTLLAKCASRYESAPGDEKYKQTPGYKAGARA"
     gene            436..>2214
                     /gene="ccsA"
                     /locus_tag="VFN38_10245"
     CDS             436..>2214
                     /gene="ccsA"
                     /locus_tag="VFN38_10245"
                     /inference="COORDINATES: protein motif:HMM:NF027651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HET9012183.1"
                     /translation="MILVGELSLWVALLMAAWSAVTSFAGGSMGREDLIASGRRGLYA
                     TTAMIVLASIGLWTALLTHDFSLRYVASNTSANMPWVYVFSAFWGGQAGSMLFWALIL
                     ALYSAIAVWSVRDSARELAPWACGTLAVILVFFIATTCLKANPYDRLSFVPADGRGMN
                     PQLQNPGMAIHPPNLYLGYVATAIPFAFAIAALISRKLDAEWLSIVRRWSLVSWFFLT
                     IGITLGMWWAYVELGWSGYWAWDPVENASLLPWLTGTAFLHSIMIQEKRGMLRKWNVV
                     LVVTTFLLAIFGTFLTRSGIIESVHSFAQSPVGPWFATFFFGATGATIYFVATRLKDL
                     EAKAELESMVSREAAFLYNNLVLVGIAFSVLWGTLFPVLSEWVRGSKITVGPPFFNTV
                     NVPLGLLLLALTGIGPLIAWRKASTSNLSRQFRAPVLFGLAVGALLVALGMRNFHALV
                     AYTLAGFVAGTIGQEFYKGIGARHSMHDESIPVAALRLVARNRRRYGGYIVHAGIVIL
                     FCAFAGLAFKKDHDVQLKAGETRELVDPLGHRWKFVSQGVSTSETLNRFVTAVGLEVW
                     RDGVRQGIVTSEKRQHFDSNKQPQFEP"
BASE COUNT          314 a          769 c          747 g          384 t
ORIGIN      
        1 aaccaaattc ctcatcggcg gtgcagtcgt gctcggcacg gcggggtacc tcatggcgac
       61 gtccatcaag gacaccggca tgtactacct cacgcccacc gagctggcga cgaagctcga
      121 cgccgacccg ggcttccgga acaccggggt caaggtgggc gcgcgcgtcg tgcccggctc
      181 catccagcgc gtgccgggcg gccgggagta cgccttccgg gtgaccgacg gggcgaaggt
      241 gttcccggtc gtctaccgcg gcatcgcccc cgataccttc accgacggcg tggacgtcgt
      301 cgtggaaggg cgcatgggtg aggacggcac tttccgcgcg acgacgctgc tcgccaagtg
      361 cgcctcgcgc tacgagagcg cgccgggcga cgagaagtac aagcagacgc ccgggtacaa
      421 ggcgggagcg cgggcatgat cctcgtgggc gagctgtcgc tctgggtcgc cctcctcatg
      481 gcggcctggt cggccgtgac gtcgttcgcc ggcggctcga tggggcgcga ggatctcatc
      541 gcgagcgggc ggcgcggcct gtacgccacc acggcgatga tcgtgctcgc gtcgatcggg
      601 ctctggacgg cgctgctcac ccacgacttc tcgctccggt acgtcgcgtc gaacaccagc
      661 gcgaacatgc cgtgggtgta cgtcttctcg gcgttctggg gcggccaggc gggctcgatg
      721 ctgttctggg ccctcatcct cgcgctctac agcgccatcg ccgtgtggtc ggtgcgcgac
      781 agcgcacgcg agctggcgcc gtgggcctgc ggcaccctcg ccgtgatcct cgtcttcttc
      841 atcgcgacca cctgcctgaa ggccaatccg tacgaccggc tgtcgttcgt ccccgccgac
      901 ggccgcggga tgaacccgca gctccagaat ccggggatgg ccatccatcc gccgaacctc
      961 tacctcggct acgtcgccac ggcgatcccg ttcgccttcg cgatcgccgc gctgatctcg
     1021 cgcaagctcg acgccgagtg gctgagcatc gtccggcggt ggtcgctggt gtcctggttc
     1081 tttctcacca tcggcatcac gctcgggatg tggtgggcct acgtcgagct cgggtggagc
     1141 ggatactggg cctgggatcc ggtggagaac gcgagcctcc tcccctggct cacggggacg
     1201 gcgttcctgc actccatcat gatccaggag aagcggggga tgctgcgcaa gtggaacgtc
     1261 gtgctcgtcg tgacgacctt cctgctggcg atcttcggca ccttcctcac ccgtagcggc
     1321 atcatcgaga gcgtgcactc gttcgcgcag tcgccggtgg ggccgtggtt cgcgaccttc
     1381 ttcttcggcg ccaccggggc gacgatctac ttcgtcgcca cgcggctgaa ggacctggag
     1441 gcgaaggcgg agctcgagag catggtgagc cgcgaggcgg ccttcctgta caacaacctc
     1501 gtcctcgtcg gcatcgcctt ctcggtgctg tggggcacgc tcttccccgt gctcagcgag
     1561 tgggtgcgcg gctccaagat cacggtgggc ccgcccttct tcaacacggt gaacgtgccg
     1621 ctcgggctgc tgctgctcgc gctcacgggt atcgggcccc tcatcgcctg gcgcaaggcg
     1681 tccacgtcga acctctcgcg gcagttccgc gccccggtgc tgttcggcct cgccgtcggc
     1741 gcgctgctcg tcgctctcgg gatgcggaac ttccacgccc tcgtcgccta cacgctggcc
     1801 ggcttcgtcg ccggcaccat cggccaggag ttctacaagg gaatcggcgc gcggcactcg
     1861 atgcacgacg agtcgatccc cgtggcggcg ctccgcctcg tggcgcgcaa ccgacgccgc
     1921 tacggcggct acatcgtcca cgccggcatc gtcatcctct tctgcgcctt cgccggcctg
     1981 gcgttcaaga aggaccacga cgtccagctc aaggcggggg aaacgaggga gctggtggat
     2041 ccgctgggcc accgctggaa gttcgtgagc cagggggtgt ccacctcgga gacgctcaac
     2101 cgcttcgtca ccgccgtggg cctcgaagtc tggcgcgacg gcgtgcggca gggaatcgtg
     2161 acgagcgaga agcggcagca cttcgacagc aacaagcagc cgcagttcga gccc
//
LOCUS       DASSYW010000639         2078 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1143161, whole genome shotgun sequence.
ACCESSION   DASSYW010000639 DASSYW010000000
VERSION     DASSYW010000639.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2078)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2078)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2078
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1143161"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..761)
                     /locus_tag="VFN38_10250"
     CDS             complement(<1..761)
                     /locus_tag="VFN38_10250"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HET9012184.1"
                     /translation="MAVCIGSDLAKDMVGEPLLRGVSFKVERRDRLTLSGRNGSGKTT
                     LLRMLAGETSIDGGELVLAKGTRVALHDQRPPRERNLSLREYVLAGSADLVALEQELS
                     RLEQRMADGDHEPATLDAYSRAQARLEHAGGYNWRERAMAVVRGLGFVDADLDRLLST
                     FSGGELTRASLARTLAGDPDLILLDEPTNHLDIESLEWLENRLTSVDAAVILVAHDRW
                     FLEAVGTAVLEMEGGRTRYFKGSWHTWRKEQAAREL"
     gene            789..1616
                     /locus_tag="VFN38_10255"
     CDS             789..1616
                     /locus_tag="VFN38_10255"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class F420-dependent oxidoreductase"
                     /protein_id="HET9012185.1"
                     /translation="MDFGVGYFPTHDGMTPGAVARMVEERGHESLFFAEHTHIPASRD
                     SKWPGGGELPQKYWHSYDLFVALTAAAEATSRLRVGSGICLVIERDPIITAKEVASID
                     HLSGGRLEFGVGAGWNREEMANHGTDPRLRMAVMRERVEAMKAIWTQEEASYAGDHVN
                     FERIWSEPKPAQRPHPPILVGGSGPTVLDRVLSFGDGWFPNYRDLSDERVAELRSRAE
                     RAVYVDVLGMPPKAEAIERCAKLGVRRASLWLPTGGSSTVERNLEKWEAAIAEFTGS"
     gene            1653..>2078
                     /locus_tag="VFN38_10260"
     CDS             1653..>2078
                     /locus_tag="VFN38_10260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012186.1"
                     /translation="MEGRTVAKAKLIALRIAMLLAAVNVWTGSPLAALWVASRLQGSG
                     PPKMAPIFVVVVLIAVFSALLMWLLARLDLEYRARTGQTSQVHRHVAWLRSMRGERPQ
                     YAGEPVQVSALERTLVLMVVACFVAFEIWFFFFSTSPIDQ"
BASE COUNT          311 a          723 c          729 g          315 t
ORIGIN      
        1 agctcgcgcg ccgcctgctc cttgcgccac gtgtgccacg agcccttgaa gtagcgcgtg
       61 cgaccgccct ccatctcgag cacggccgtg ccgaccgcct ccaggaacca gcggtcgtgg
      121 gcgaccagga ttaccgcggc gtcgaccgac gtgagccggt tctcgagcca ttcgagcgac
      181 tcgatgtcca ggtggttggt cggctcgtcg agcaggatca ggtcgggatc gccggccagg
      241 gtgcgcgcga gcgacgcacg tgtcagctcg ccgccggaga aggtcgacag cagccggtcg
      301 agatcggcat cgacgaagcc gagcccccgc accaccgcca tcgcgcgctc gcgccagttg
      361 taaccgccgg cgtgctccag ccgcgcctgg gcgcgcgagt aggcgtcgag cgtggccggc
      421 tcgtggtcgc catcggccat ccgctgctcc agccgcgaga gctcctgctc gagcgcgacg
      481 aggtcggcgc tgcccgccag cacgtactcg cgcagcgaca ggttgcgctc gcgcggcggg
      541 cgctggtcgt ggagggcgac gcgcgtgccc ttggcgagca ccagctcgcc gccgtcgatg
      601 gacgtctccc ccgccagcat ccgcagcagc gtcgtcttgc ccgatccgtt gcgcccggac
      661 agggtcaacc ggtcgcggcg ctcgaccttg aacgagacac cgcgaaggag cggctcgcca
      721 accatgtcct tggcgaggtc ggatccgata cagacggcca tgagccttcg atcctaggat
      781 cggccgtcat ggacttcggc gtcggctact tcccaaccca cgatggcatg acgccggggg
      841 cggtcgcgcg catggtcgag gagcgcggcc acgagtcgct gttcttcgcc gagcacaccc
      901 acatcccggc cagccgcgac agcaagtggc cggggggtgg cgagctgcct cagaagtact
      961 ggcactcgta cgacctgttc gtggccctca ccgccgcggc cgaggcgacg agccggctgc
     1021 gggtgggcag cggcatctgc ctggtgatcg agcgcgaccc gatcatcacc gcgaaggagg
     1081 tcgcctcgat cgaccacctc tccggcggcc gcctggagtt cggtgtcggc gcgggctgga
     1141 accgcgagga gatggccaac cacggcaccg acccgcgcct gcgcatggcc gtgatgcgcg
     1201 agcgggtgga ggccatgaag gcgatctgga cccaggagga ggcgtcctac gcgggtgacc
     1261 acgtcaactt cgagcgcatc tggtccgagc ccaagcccgc ccagcggccg cacccgccga
     1321 tcctggtcgg cggcagcggc ccgaccgtgc tcgaccgcgt cctgtcgttc ggagacggct
     1381 ggttcccgaa ctaccgcgac ctgagcgacg agcgcgtcgc cgagctgcgc agccgcgccg
     1441 agcgcgccgt ctacgtcgac gtgctcggca tgcctccgaa ggcggaggcc atcgaacgct
     1501 gcgccaagct gggcgtgcgc cgagcaagcc tgtggctgcc gaccggcggc agctccaccg
     1561 tcgagcgcaa cctcgagaag tgggaagcgg cgatcgccga gttcacgggc tcctgaggcg
     1621 taagctcgcg ggacgcgccc gcgttggtgt tgatggaggg gagaacggtc gcgaaggcca
     1681 agctcatcgc gctgcgcatc gcaatgctgc tcgccgccgt caacgtgtgg acggggagcc
     1741 cacttgctgc gctctgggtc gcatcgcgct tgcagggctc gggaccgccc aagatggcgc
     1801 cgatcttcgt ggtggtcgtg ctgatcgcag tcttcagcgc gcttctgatg tggctgctgg
     1861 ctcggctcga cctcgagtac agggctcgga caggacagac gtcgcaggtc caccggcatg
     1921 tcgcatggct gcggagcatg cgcggcgagc ggccacagta cgccggcgaa ccggttcagg
     1981 tcagcgcact cgagcgaacc ctggtcctga tggtggtcgc ctgcttcgtc gcgttcgaga
     2041 tctggttctt cttcttctcg acctcgccga tcgaccag
//
LOCUS       DASSYW010000640         4425 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_644254, whole genome shotgun sequence.
ACCESSION   DASSYW010000640 DASSYW010000000
VERSION     DASSYW010000640.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4425)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4425)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4425
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_644254"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(68..1216)
                     /locus_tag="VFN38_10265"
     CDS             complement(68..1216)
                     /locus_tag="VFN38_10265"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HET9012187.1"
                     /translation="MSRRALTIGSTVVALAAAVFLLQFTASVLIPLVVSLLLFYALDP
                     VVSHLVRWHVPRAPAALLVMLALVGGIGAGGWAIWPQLDQVVDDIPRGAAELRRELRS
                     ARGGDKSTLQRVQEAAKAIDAAAAEAASPPPRTPGVTQVEVRQPTRTSDWLWAGGAGA
                     LTFAGQSLTVFFLTIFLLSEGDSFKRKFVRHLQTRGRQRLTVTILNDIQTQIERFVLV
                     NVATSVFVGVATGFVLWGIGVRQPAVWGLFAGVMNIVPYFGPLVVTAVLTAVGLLQFG
                     DIPGALLVGGVTLTITSIEGMVLTPHLLSKAGSLNHVAIFTAIAFWSWAWGAAGMLLA
                     VPMLMVFKAVCDHVEGLGAVADLLGTSDDPAGSSVTSLATPAPGPSPR"
     gene            complement(1216..1365)
                     /locus_tag="VFN38_10270"
     CDS             complement(1216..1365)
                     /locus_tag="VFN38_10270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lmo0937 family membrane protein"
                     /protein_id="HET9012188.1"
                     /translation="MLETLIVLLVLLWLLGMVSSYTVGGLIHVLLVVALVVLVIRVIQ
                     GRRVV"
     gene            complement(1439..1906)
                     /locus_tag="VFN38_10275"
     CDS             complement(1439..1906)
                     /locus_tag="VFN38_10275"
                     /inference="COORDINATES: protein motif:HMM:TIGR00638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TOBE domain-containing protein"
                     /protein_id="HET9012189.1"
                     /translation="MTVRAAAQRLGVGYSTLKQWIYTGRVRTTTTAGGHHRVAEAEID
                     RLVAKGGGDAPPKSKAAPTSGLIVALSGRNRLRGFVEEVRTDGLLAQIRLRIGDQRLT
                     AVITADAVDELKLKRGDNAVAIIKSTEVMIAREAGVAPVEPSSTTGRRKRRSR"
     gene            complement(1912..3000)
                     /gene="modC"
                     /locus_tag="VFN38_10280"
     CDS             complement(1912..3000)
                     /gene="modC"
                     /locus_tag="VFN38_10280"
                     /EC_number="7.3.2.5"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015412 - ABC-type molybdate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015689 - molybdate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum ABC transporter ATP-binding protein"
                     /protein_id="HET9012190.1"
                     /translation="MTLAVHLAKRLPSGFALDVSFLAESGVTILFGASGSGKTTILRC
                     VAGLAQPDGGRIAIGDRTLFNGEGGVNVPIPQRRIGYVFQQLALFPHLTVADNIGYGL
                     AGMPRAERRARVAEAAESFRIANLLDRRPRQISGGEQQRTALARALVINPDALLLDEP
                     LSALDYAIQLHIMDDLRRWNRERRIPILYVTHSHREAFALGERLIALEQGRILASGSP
                     HEVLDHPSQAPLAELAGFENVFDATVTARRERAGTMHCVLTGSATELEVPLGVTAEGG
                     AIRVAIRAGDILVADREPVGLSARNVLPGEVVDYALHGSTVVATIDAGSRFVVHLTPG
                     GADTLGLRTGARMWLVIKTYSCRVARYS"
     gene            complement(2997..3671)
                     /gene="modB"
                     /locus_tag="VFN38_10285"
     CDS             complement(2997..3671)
                     /gene="modB"
                     /locus_tag="VFN38_10285"
                     /inference="COORDINATES: protein motif:HMM:TIGR02141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015412 - ABC-type molybdate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015689 - molybdate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter permease subunit"
                     /protein_id="HET9012191.1"
                     /translation="MDWEALWLTARLAAIVSAILLLVSLPLAHWIVFSRKRWTFLVEA
                     VVSLPLVLPPTVLGFYMLMAMGTRSPLGRLWSDWTGHPLAFTFEGLVVASLFYSLPFA
                     VQPVATAFSQIDPSLREASATLGASPLRTFFRVVLPMSFEGVLAGGVLSFAHTVGEFG
                     VVLMVGGNLPGVTRTVSISVYDHVQALQYREATITALFMLGFSFLVLLGVYGLRRRPL
                     AAAPLA"
     gene            complement(3676..>4425)
                     /gene="modA"
                     /locus_tag="VFN38_10290"
     CDS             complement(3676..>4425)
                     /gene="modA"
                     /locus_tag="VFN38_10290"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009897 - external side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015412 - ABC-type molybdate transporter
                     activity [Evidence IEA];
                     GO_function: GO:0030973 - molybdate ion binding [Evidence
                     IEA];
                     GO_process: GO:0015689 - molybdate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HET9012192.1"
                     /translation="VGLAFALAGAPQGQAPKRLTIAAASDLQTVLPDIVRDFERAGSA
                     TVAVSYGSSGNFFAQIQNGAPFDVFLSADVDYPKRLAAVGVADSSTMRVYATGHLVLW
                     ARRDGKLDLSRGLASLTDARVRHVAVANPKYAPYGRAAVAALRLAGLYDTLQPKLVTG
                     ESLAQAAQLVESGNADVGVLSRSLVLGSTMRVEGTYVDIPTSLHPPIEQAAIVVRASR
                     EPALARAFVAFLGRDDARRHLERFGFALPRH"
BASE COUNT          752 a         1562 c         1518 g          593 t
ORIGIN      
        1 gggccgctca tcgccggcta tctgatcgag cacggcctgt tgaccgagtg gggcctggcc
       61 gccgcggcta ccgcggtgat gggcctggtg ctggcgtcgc aagcgacgta acactcgacc
      121 ccgctggatc gtcgctcgtg ccgagcagat ccgcgacggc gcccagcccc tcgacgtgat
      181 cgcagacagc cttgaagacc atcagcatcg gcaccgccag cagcatgccc gccgcgcccc
      241 acgcccagct ccagaacgcg atggctgtga agatggccac atggttcagc gaccccgcct
      301 tgctgaggag gtgcggcgtc agcaccatgc cttcgatcga ggtgatcgtc agcgtcacgc
      361 cgcccaccag cagcgcgccc gggatgtcgc cgaactgcag cagccccacg gctgtcagta
      421 ccgcggtgac gaccagcgga ccgaaatacg gcacgatgtt catcacgccg gcaaacagcc
      481 cccacaccgc cggctggcgc acgccgatgc cccacagcac gaacccggtg gcaacgccga
      541 cgaagacgga cgtggccacg ttgaccagca cgaaccgctc gatctgcgtc tgaatgtcgt
      601 tgaggatggt gaccgtcagg cgctggcggc cacgcgtctg cagatggcgc acgaacttgc
      661 gcttgaacga gtcgccctcg ctgagcagga agatcgtcag gaagaagacc gtgaggctct
      721 gccccgcgaa cgtgagcgct ccggcgccgc cggcccagag ccagtccgac gtgcgcgtgg
      781 gctgccgcac ttcgacctga gtgacgcccg gcgtgcgcgg cgggggcgat gcagcttcag
      841 ccgcggccgc gtcgatcgcc ttggccgcct cctgcacccg ctgcagggtg gacttgtccc
      901 cgccgcgggc ggagcgcagc tctctccgga gctccgccgc gccgcgcggg atgtcgtcca
      961 cgacctggtc gagctgtggc cagatcgccc agccgccggc tccgatgccg cccacgaggg
     1021 ccagcatcac caggagcgcg gcgggggcgc gcggaacatg ccaccgcacc aagtggctga
     1081 cgaccgggtc gagcgcgtag aacagcagca gcgacacgac gagcggaatc aggaccgacg
     1141 ccgtgaactg cagcaggaac accgcggcgg cgagcgcgac gacggtgctt ccgatcgtca
     1201 acgcgcgccg cgacatcaca ccacgcgccg tccctgaatc acccggatga ccaagaccac
     1261 cagcgccacg acgagtagca cgtggatcaa gccgccgacc gtgtacgacg aaaccatgcc
     1321 gagcagccac aagagcacga gcagcacgat gagagtttcg agcatcactc ctccttagtc
     1381 cgcccgcttg actgcacggc cggtgccaag gaggagattg agcgaacctc tcggaaaatc
     1441 agcgggatct gcgcttgcgc cgtcccgtcg tgcttgaagg ttctacagga gctaccccgg
     1501 cctctcgggc gatcatcact tcggtggact tgatgatggc cacggcgttg tcgccgcgct
     1561 tgagcttcag ctcgtccacg gcgtcagcgg taatcacagc cgtgaggcgc tggtcgccaa
     1621 tgcgcagccg gatctgcgcc agcagcccat cggttcgaac ctcttccacg aacccgcgca
     1681 gccggttgcg tccgctgagt gccacgatga ggccgctcgt gggcgccgcc ttcgatttgg
     1741 gcggcgcgtc gccgccgccc ttggccacca gccgatcgat ttccgcctcg gccacgcggt
     1801 ggtggccgcc cgctgtcgtg gtcgtgcgaa cgcggcccgt gtagatccat tgcttgagcg
     1861 tcgaatagcc gacgcccagc cgttgcgccg cggcgcggac ggtcaagagg ctcatgagta
     1921 cctcgcaacc cggcaggagt aggtcttgat gacgagccac atgcgcgcgc cggtgcggag
     1981 gcccagcgtg tcggcccctc ccggcgtgag gtgcacgacg aagcgggagc cggcgtcgat
     2041 cgtcgccacc acggtggagc cgtgcagcgc gtagtccacc acttcgccgg gcagcacgtt
     2101 tcgagcgctg aggcccaccg gctcccggtc ggccaccagg atgtcgccgg cgcggatggc
     2161 gacgcgaatg gcgccgcctt ccgcggtgac accgagcggc acctcgagct cggtggcgga
     2221 cccggtcagc acgcagtgca tcgtgccggc acgctcgcgc cgtgcggtca ccgtggcgtc
     2281 gaagacgttc tcgaagccgg cgagctccgc cagcggcgcc tgcgaggggt gatcgagcac
     2341 ttcgtgcggt gaaccgctcg ccagaatgcg gccctgttcc aatgcgatca gccgctcgcc
     2401 cagcgcaaac gcttcgcggt ggctgtgcgt gacgtagagg atgggaatgc ggcgctcgcg
     2461 gttccagcgc cgcaggtcgt ccatgatgtg cagctggatc gcgtagtcga gcgccgacaa
     2521 cggttcgtcg agcaggagcg cgtcgggatt gatgaccagc gcgcgcgcga gcgccgtccg
     2581 ctgctgctcg ccgccggaga tctggcgcgg gcggcgatcg agcaggttcg cgatgcggaa
     2641 cgactcggcg gcttccgcga cgcgcgcgcg tcgctcggcg cgcggcatcc cggccaggcc
     2701 gtagccgatg ttgtcggcga cggtcaggtg cggaaagagc gcgagctgct ggaacacgta
     2761 gccgatccgg cgctgcggta tcggcacgtt cacgccgccc tcgccgttga agagcgtgcg
     2821 gtcgccgatc gcgatgcggc cgccgtcggg ttgggccagc cccgcgacgc agcgcaggat
     2881 cgtcgtcttg cccgagcccg aggcgccgaa caggatcgtg acgccgctct cggcgagaaa
     2941 agagacgtcg agcgcgaagc cgctcggcag ccgcttggcc aggtgcaccg cgagcgtcat
     3001 gccaggggcg ccgccgccag cggccgccgg cgcagtccat agacgccgag cagcacgagg
     3061 aacgagaagc cgagcatgaa gagcgcggtg atcgtcgctt cgcggtactg aagcgcctgc
     3121 acgtggtcgt acaccgagat cgacaccgtg cgcgtgacgc ccggcagatt gccgcccacc
     3181 atcaggacga cgccgaactc gcccacggtg tgggcgaagc tcaagacccc gcccgccagt
     3241 acgccctcga acgacatcgg cagcacgacg cgaaagaacg tacgcagcgg ggaggcgccg
     3301 agcgtcgccg acgcctcccg caacgacggg tcgatctggc tgaacgccgt ggccaccggc
     3361 tgcaccgcga acggcaggct gtagaagagc gaggccacga ccagtccctc gaacgtgaac
     3421 gccagcggat ggccggtcca atcgctccac aagcggccca gcgggctgcg cgtgcccatc
     3481 gccatcagca tgtagaagcc gagcaccgtg ggcgggagga cgagcggcag cgacaccacc
     3541 gcctcgacga gaaacgtcca gcgcttgcgt gagaagacga tccagtgtgc cagcggcagg
     3601 ctcacgagga gcaggatggc cgacacgatg gccgccagcc gcgcggtgag ccagagcgcc
     3661 tcccagtcca tgcgttcagt ggcggggcag cgcgaagccg aagcgctcga gatggcggcg
     3721 cgcgtcgtcg cggcccagga acgcgacgaa ggcgcgggcc agcgccggct cccgcgacgc
     3781 tctgaccacg atggcggcct gctcgatggg gggatgaagc gacgtcggga tgtcgacgta
     3841 ggtcccctcg accctcatcg tcgagccgag gaccagcgat cgcgagagca ccccgacgtc
     3901 ggcgttgccc gactcgacga gctgcgccgc ttgcgcgagg ctctcgccgg tcacgagctt
     3961 cggctgcagc gtgtcgtaca accccgcgag cctgagcgcc gccaccgccg cgcggccgta
     4021 tggtgcgtac ttcggattgg ccacggccac gtggcggaca cgcgcgtcgg tgagcgaggc
     4081 cagccctcgg ctcaagtcga gttttccatc gcgccgcgcc cacagcacca ggtgtccggt
     4141 ggcgtacacc cgcatcgtgc tcgaatccgc cacgcccacc gcggccagcc gcttcgggta
     4201 gtccacgtcc gctgacagga acacgtcgaa cggcgcgccg ttctgaatct gcgcgaagaa
     4261 gttgcccgag gagccgtacg acaccgccac ggtggccgag cccgcccgct cgaagtcgcg
     4321 cacgatgtcc ggcagcaccg tctgcaggtc ggacgccgcc gcgatcgtca gccgtttcgg
     4381 cgcctgcccc tgcggcgccc ccgccagggc gaacgcgagg ccgac
//
LOCUS       DASSYW010000641         2327 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_945420, whole genome shotgun sequence.
ACCESSION   DASSYW010000641 DASSYW010000000
VERSION     DASSYW010000641.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2327)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2327)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2327
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_945420"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..658
                     /locus_tag="VFN38_10295"
     CDS             <1..658
                     /locus_tag="VFN38_10295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012193.1"
                     /translation="WKADVGAVVGAAAVSPDGGSVCFPVRRQGRSTLHCTAADGTGAR
                     AVAESLDVRGAASWSPDGRWIVVAAREGVGVRVFKIPVGGGAPVRLVDSVSSNPVWSP
                     DGAFILYSGTPRARSVPLQAVTPDGRPYPLPALAVDRVGDSYRFLPGGKRLVVKLGGF
                     RRQDFWMFDLATGRRRPLTALRPGESVHRFDVSPDGREILFERVAENSDVVLIELPPR
                     "
     gene            778..957
                     /locus_tag="VFN38_10300"
     CDS             778..957
                     /locus_tag="VFN38_10300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012194.1"
                     /translation="MLRSRVWRVVATLFILMNLAGAGIAAVRGEALHTAIHAVLLLLA
                     ALLVWRFAARDVARY"
     gene            complement(1004..1582)
                     /locus_tag="VFN38_10305"
     CDS             complement(1004..1582)
                     /locus_tag="VFN38_10305"
                     /EC_number="2.1.1.100"
                     /EC_number="2.1.1.334"
                     /inference="COORDINATES: protein motif:HMM:NF016107.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
                     /protein_id="HET9012195.1"
                     /translation="MKPLPFAWPHAVLFWAVFLWAFQPELGLVRRAERSQTPSDAKSL
                     QVIMLGQSVAFFASFWLAWVPALQFTHRSAAFYGGLATIVAGSLLRRHCFRMLGASFT
                     GDVRAHASQQVVSRGAYRILRHPSYTAGIMLNAGAGIALGSWASAILMIAGSTAAYLY
                     RMAVEERTLSAVIGEPYREFMRTRKRLIPFVY"
     gene            complement(1591..2175)
                     /locus_tag="VFN38_10310"
     CDS             complement(1591..2175)
                     /locus_tag="VFN38_10310"
                     /inference="COORDINATES: protein motif:HMM:NF014376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HET9012196.1"
                     /translation="MRRRLLCQVIATAIASASLPACAGNAKPAARSLERAPGGGTGLV
                     LQEGEGERRVRRNAAKGPFILKVDRRNGGSPDLVMGYEDIAPGAEIQPHTHLVADEIL
                     FIHRGSGVARLGERESPISAGATVYIPRHVQVSVRNTGTEPLGVAFIFSKPGFEELMR
                     DNSVLEGQPVTPVSPEERERIRKRHSWHTVYPQR"
BASE COUNT          311 a          823 c          854 g          339 t
ORIGIN      
        1 ctggaaagcg gacgtcggag ccgtcgtcgg cgcggcggcc gtgtcgccgg acggagggag
       61 cgtctgcttc ccggtacgca ggcagggccg ctccacgctc cactgcacgg ccgccgacgg
      121 aaccggcgcg cgcgccgtcg ccgagtcgct cgacgtgcga ggcgcggcct cctggtcgcc
      181 cgatggacgg tggatcgtcg tcgccgccag ggagggcgtg ggcgttcgcg tcttcaagat
      241 cccggtcgga ggcggcgctc cggtccggct ggtggattcg gtctcctcca atccggtctg
      301 gtcgccggac ggcgccttca tcctctactc cggaacgccg cgggcccgca gcgtccccct
      361 ccaggcggtc actccggacg gccggccata cccgctgccg gcgctcgcgg tggatcgcgt
      421 cggcgacagc tatcgcttcc ttcccggcgg aaagcggctc gtggtgaagc tcggtggatt
      481 ccgtcgccag gacttctgga tgttcgacct ggccaccgga cgtcggcggc cgctgacggc
      541 gctgcgaccc ggcgagtcgg tccaccgctt cgacgtgtcg ccggacggca gggagatcct
      601 cttcgagcgc gtggcggaga actcggacgt cgtgctgatc gagctgcccc cccgctagcg
      661 gccgcggcgg agggaaaccg cgcaacggag ctccgcgtag ggaccgtgcc gatgcgacga
      721 tgccgggcct cggccgaatg ccgtgcaggc cggcgcaacc acgggaggaa cccgacgatg
      781 ctacgctcca gggtctggcg ggtggtggcc acgctgttca tcctcatgaa cctggccggc
      841 gcggggatcg ccgccgtgcg gggcgaggcg ctccacaccg ccattcacgc cgtgctgctg
      901 ctcctcgccg cgctcctcgt gtggcgcttc gccgcgaggg acgtcgcgcg ctactgagct
      961 cgggtgacat cgagcgctgg cgcgcgacgg cgggccgccg ccgtcagtag acgaacggga
     1021 tcaggcgctt gcgcgtccgc atgaactccc ggtacggctc gccgatgacg gccgacagcg
     1081 tgcgctcctc gacggccatc cggtacaggt aggccgcggt cgaccccgcg atcatgagga
     1141 tcgccgacgc ccagcttccg agcgcgatcc cggcccccgc gttcagcatg atgccggcgg
     1201 tgtacgacgg gtggcgcagt attcggtagg cgccgcggct gacgacctgc tggctggcgt
     1261 gcgcccggac gtctcccgtg aacgacgcgc cgagcatccg gaagcagtgc cggcggagca
     1321 ggctccccgc cacgatcgtc gcgaggccgc cgtagaacgc ggcgctccga tgcgtgaact
     1381 gcagtgccgg gacccaggcg agccagaagg aagcgaagaa ggcgaccgac tgcccgagca
     1441 tgatgacctg cagcgacttc gcgtcggacg gggtctggct ccgctcggcg cgacgcacga
     1501 ggccgagctc gggctggaac gcccagagga agacggccca gaacagcacg gcgtggggcc
     1561 aggcgaaggg gagcggtttc attcgcgcgg tcagcgttgc gggtagacgg tgtgccagct
     1621 gtggcgcttg cgaatccgct cgcgctcctc gggcgagacc ggcgtcacgg gctgtccctc
     1681 gagcaccgag ttgtcgcgca tcagctcctc gaagcccggc ttcgagaaga tgaaggcgac
     1741 gccgagcggc tcggtgccgg tgttgcggac gctcacctgc acgtggcgcg ggatgtagac
     1801 ggtggcgccg gcgctgatcg gcgactcgcg ctcgccgagc ctggccacgc cgctgccgcg
     1861 atggatgaag aggatctcgt cggccaccag atgcgtgtgc ggctggatct cggcgccggg
     1921 cgcgatgtcc tcgtagccca tcacgaggtc gggcgatcca ccgttccgcc tgtccacctt
     1981 gaggatgaag ggacccttgg cggcgttccg gcgcacgcgg cgctccccct ccccctcctg
     2041 gagcaccaga ccggtgcccc ctcccggcgc tcgctcgagc gacctggcgg ccggcttcgc
     2101 gttgcccgcg cacgccggca gactcgcgct cgcgatggcg gtggcgatga cctggcacag
     2161 cagccgacgg cgcacggggc cctcctcgcg atgtgggtgg cgcgtctccg gcgtcgccga
     2221 aggcgcggtg cggctcgaag ctacaccggc gcgctccgct cggcgctcaa ctggtcggcg
     2281 atctccccga tctgcgccgc atgacgcgcc tcgtggtcgg ccgcgag
//
LOCUS       DASSYW010000642         3061 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1070322, whole genome shotgun sequence.
ACCESSION   DASSYW010000642 DASSYW010000000
VERSION     DASSYW010000642.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3061)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3061)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3061
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1070322"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2117)
                     /locus_tag="VFN38_10315"
     CDS             complement(<1..2117)
                     /locus_tag="VFN38_10315"
                     /inference="COORDINATES: protein motif:HMM:NF027651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type biogenesis CcmF C-terminal
                     domain-containing protein"
                     /protein_id="HET9012197.1"
                     /translation="MNGLVGHGALLLSLAFLVMGIVVVPIALRRGRGDLVAIAYGSVY
                     ANFLLVSAAAAAMVIALVTHDFSVSYVAQVGSRATPLFYTIISLWGALEGSILFWAWV
                     LALYSTLVVSLNRRRAGTLVPYAAMVLLAVSLFFAILLVGPADPFQVVFPVPPDGPGP
                     NPLLQNHILMGVHPPLLYLGYVGMSVPFAFAIGALLSGEAESNDWIRLTRNWTVLTWG
                     FLSAAIIAGMWWSYEVLGWGGYWAWDPVENASFLPWLTATAFLHSAMVQERRSMLRLW
                     NINLVVGTFVLTILGTFLTRSGIISSVHAFTTGTIGWYFLAFIAVVLLATLALVAGTS
                     DRLRTTGSLDSAASRETVFLLNNLFLTAFMLTVLVGTLYPLVAEAVRGVKVSVGAPFF
                     NRMTLPMIAALLFLMGVGPALPWKSASRAELRAKLLPPAAGAVLLAAVAIAMGIHNFY
                     GLLAFAFVGYSATANLREFWIGARARRTVHGEGWSTALVRLVAGNRRRHGGYIAHLGV
                     FLVARGVTASSSLRTENEATLKPGETLTVAGRTVRLRDVWGREEPQRSVVGATMEVLR
                     GGRVVGETTPQQSDEHSLAAMMVGREVLLTVEKEDAQPKQAVLQVEGLRVKDKRDHEA
                     VAGVSFEVHAGETLGIAGVQGNGQTELVEALTGLTHSYGGKVILDGQDVTNATPRRMV
                     DAGIAHVPEDRHQFGMIESYAIA"
     gene            complement(2114..2572)
                     /locus_tag="VFN38_10320"
     CDS             complement(2114..2572)
                     /locus_tag="VFN38_10320"
                     /inference="COORDINATES: protein motif:HMM:NF015085.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c maturation protein CcmE"
                     /protein_id="HET9012198.1"
                     /translation="MTGARRGSRRVVFAGIAVILLVFGYLLYGGLDENVVYFLTPREL
                     LAKVSQGVDVPVRLGGQVKPGTVKWNDASLDLSFTVTDGASDIAVHSRGAPPQMFRDG
                     MGVVVEGRYHRDGVFQSTNLIVKHSNEYRAPKPGETPQVMYKTLMKGGGS"
     gene            complement(2569..2709)
                     /locus_tag="VFN38_10325"
     CDS             complement(2569..2709)
                     /locus_tag="VFN38_10325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012199.1"
                     /translation="MTDNWLFVGAAFVLTWAVLLGYLAHLRRAMRRARTLLESASMPG
                     TP"
     gene            complement(2702..>3061)
                     /gene="ccsA"
                     /locus_tag="VFN38_10330"
     CDS             complement(2702..>3061)
                     /gene="ccsA"
                     /locus_tag="VFN38_10330"
                     /inference="COORDINATES: protein motif:HMM:NF013725.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HET9012200.1"
                     /translation="TLVLFLILAGYLSLRAFIDDRDQRAQWSAAVGVLGAINVPIVYL
                     SVRWWRTIHQIQSSPSTVDPAYVIGLRLNAFAFLFVMIYFIRRRYEAAMMERAAERVS
                     ESAALGGVSVSGGSDHD"
BASE COUNT          541 a         1073 c         1041 g          406 t
ORIGIN      
        1 tcggcaatcg cgtaactctc gatcatgccg aattgatgac gatcttctgg gacgtgcgcg
       61 atgcccgcat cgaccatgcg gcgcggcgtg gcattagtaa catcctgccc gtccaatatg
      121 accttgccgc cataggagtg agtaaggcct gtcagtgcct caaccaactc ggtctgtccg
      181 ttgccctgca cgccggcgat acccaacgtt tcgccggcat gcacttcaaa tgaaacgccc
      241 gccacggctt cgtgatcacg cttgtccttc acacgcaagc cttccacttg cagcacggct
      301 tgcttgggct gagcgtcttc cttctccacc gtgagcagca cttcccgacc caccatcatg
      361 gcggccaggc tgtgctcgtc cgactgctgc ggggtcgtct cgccgacgac gcgcccgccg
      421 cgcagcacct ccatcgtggc gccgaccacc gaccgctgcg gctcctcgcg cccccacacg
      481 tcgcgcaggc gcacggtgcg ccccgccacg gtgagcgtct cgcccggttt gagcgtggcc
      541 tcgttctcgg tgcgcagcga cgacgaggcc gtgacgccgc gggcgacgag gaagacgccg
      601 aggtgggcga tgtaccctcc gtgccgccgc cggttgccgg ccacgaggcg gaccagcgcg
      661 gtcgaccacc cttcgccgtg cacggtacgg cgtgcccgcg cgccgatcca gaactcgcgc
      721 aggttcgccg tggccgagta gccgacgaag gcgaaggcga gcaggccgta gaagttgtgg
      781 atccccatgg cgatcgccac cgccgccagc agcacggcgc cggcggccgg gggcaggagc
      841 ttggcgcgca gctcggcgcg cgacgcgctc ttccacggca gcgccggccc cacccccatc
      901 aggaacagca gcgccgcgat catcggcagc gtcatgcggt tgaagaaggg ggcgcccacg
      961 ctcaccttca ccccgcgcac cgcttcggcc accagcgggt agagggtgcc gacgagcacc
     1021 gtgagcatga acgcggtgag gaacaggttg ttcagcagga acaccgtctc gcgcgacgcg
     1081 gcggagtcga ggctcccggt ggtgcgcagc cggtccgagg tgccggccac cagcgccagc
     1141 gtcgccagca gcaccaccgc gatgaaggcg aggaagtacc agccgatggt gccggtggtg
     1201 aaggcgtgca ccgacgagat gatccccgac cgggtgagga aggtgccgag gatggtgagg
     1261 acgaaggtgc cgacgacgag gttgatgttc cacaggcgca gcatgctccg ccgctcctgc
     1321 accatggccg aatggaggaa cgccgtggcg gtgagccagg ggaggaacga cgcgttctcc
     1381 accggatccc acgcccagta gcctccccaa ccgagcacct cgtacgacca ccacatgccg
     1441 gcgatgatcg ccgccgacag gaacccccac gtgagcacgg tccagttgcg ggtgagccgg
     1501 atccagtcgt tcgactcggc ctcccccgac agcagcgcgc cgatggcgaa ggcgaagggc
     1561 accgacatgc cgacgtagcc gaggtacagc agcggcgggt gcacccccat caggatgtgg
     1621 ttctgcagga gggggttcgg gccggggccg tcgggcggga cggggaacac cacctggaag
     1681 ggatcggccg gccccaccag caggatggcg aagaagagcg agacggcgag cagcaccatc
     1741 gcggcgtacg gcaccagggt gccggcgcgc cggcggttga gcgagacgac gagggtggag
     1801 tagagggcga ggacccacgc ccagaagagg atcgatccct ccagcgcccc ccacagcgag
     1861 atgatggtgt agaacagcgg ggtcgcccgg ctgccgacct gcgcgacgta cgacaccgag
     1921 aagtcgtgcg tcaccagcgc gatcaccatg gcggccgccg cggccgacac gagcaggaag
     1981 ttggcgtaca ccgagccgta ggcgatggcc accaggtcgc cgcgcccgcg ccgcagcgcg
     2041 atggggacga cgacgatgcc catcaccaga aacgcgaggg agaggagcag cgcgccatgc
     2101 ccgacgaggc cgttcacgat ccccctccct tcatgagggt cttgtacatc acctgcggcg
     2161 tctcgcccgg cttgggcgca cggtactcgt tggagtgctt cacgatgagg ttcgtgctct
     2221 ggaacacgcc gtcgcggtgg tagcgcccct ccaccacgac gcccatgccg tcgcggaaca
     2281 tctgcggcgg cgcgccccgg gagtgcacgg cgatgtcgct cgcgccgtcg gtgacggtga
     2341 aggagaggtc gagcgacgcg tcgttccact tcaccgtgcc cggcttcacc tgcccgccga
     2401 gccgcaccgg cacgtccacc ccctggctca ccttcgccag cagctcgcgg ggcgtgagga
     2461 agtacacgac gttctcgtcg agacctccgt agagcaggta gccgaacacc aggaggatga
     2521 cggcgatgcc cgcgaacacg acgcgcctgc tgccccgcct cgcgccggtc atggggtccc
     2581 cggcatgctc gcgctctcga gcagcgtccg cgcccgccgc atcgcgcgcc gcaggtgcgc
     2641 caggtagccc aggagcaccg cccacgtcag gacgaatgcg gcgccgacga acagccagtt
     2701 gtcagtcatg gtcggaccct ccgctcaccg acaccccgcc cagcgccgcg gactcggaca
     2761 cgcgctcggc ggcgcgctcc atcatcgcgg cctcgtagcg ccggcggatg aagtagatca
     2821 tcacgaacag gaaggcgaac gcgttcagcc gcagcccgat cacgtacgcg ggatccaccg
     2881 tggaggggct cgactggatc tggtggatgg tgcgccacca ccgcaccgac aggtacacga
     2941 tggggacgtt gatggcgccg agcaccccaa ccgcggcgct ccactgcgcg cgctggtcgc
     3001 ggtcgtcgat gaaggcgcgg agcgagaggt agccggccag gatcaggaac agcaccaggg
     3061 t
//
LOCUS       DASSYW010000643         2671 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_38555, whole genome shotgun sequence.
ACCESSION   DASSYW010000643 DASSYW010000000
VERSION     DASSYW010000643.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2671)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2671)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2671
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_38555"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2022)
                     /locus_tag="VFN38_10335"
     CDS             complement(<1..2022)
                     /locus_tag="VFN38_10335"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HET9012201.1"
                     /translation="MAAPSTTPGASDQSSAQPAGRRADADYQPLFALSPQSAWVYDSE
                     TLRFLEVNEAAVRSYGWTREEFLGMTLRDIRPPDEQANLDRLLAGTPGTEQFASAALH
                     RTKSGQLRRVEISSYPLEFDGRPARMVLVHDVTDRYEAQDALVRSEQKYRSVIEQLQD
                     VFFRTDAHGLWTFLNPAWISLTGHPVEESIGAHFLAYAHPSDRALLLDAFRPLAEGRV
                     QHSVVEVRYFRREGGYRWVEASTRALHDELGRFCGTTGTLRDVTERRAADEERQRLAT
                     NIRQLLDASGEGVYGLDARGVVTFVNRRGSEMLGYEPEELVGRVMHEVTHYSHRDGTA
                     YPAEQCPVHRAATQGIPCQVDDEVMWRKDGIPLEVEYAASPVREQGRVSGAVVNFRDI
                     SARRRGELELIVARDAAEAANRAKSDFLARMSHELRTPLNSIIGFANVLLKNKSGAFQ
                     DTDLSFLTRIAANGRHLLGLINDILDLSKIEAGHMTLEVSAVALDLLVRETVAEIEGQ
                     ARDHSVALRAELPARVLPVETDAARMKQVLINLIGNALKFTEEGEVVVRLETDGAGRA
                     TRLEVRDTGIGIPPGRLDAIFNVFEQAESMITRRFGGTGLGLAISRSLCELMGHRLEV
                     ASVEGEGTTMSVRLGDGPARARLRSSGATPVAVGEPADGTAPPPWHLVLV"
     gene            2117..2614
                     /locus_tag="VFN38_10340"
     CDS             2117..2614
                     /locus_tag="VFN38_10340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012202.1"
                     /translation="MPVVPFENLPDASRVWIFGSDRPLTEEGTTALLKGVDEHLTGWK
                     AHGEPLTVGSQLRDDRFLVIAVDQSSAGATGCSIDGLFRVLQGLEPTVGASLVGGGRV
                     FYRDNHAAVQSTTRDQIPELVRSGAITKDTVVFDTSLTDLGAFRSGFEKRAKESWIKG
                     MMGER"
BASE COUNT          394 a          930 c          954 g          393 t
ORIGIN      
        1 cacgagcacg aggtgccagg ggggcggcgc cgtcccgtcg gccggctcgc cgaccgccac
       61 cggcgtcgcg ccggaggagc gcagtcgcgc gcgcgccggc ccatcgccga gacggaccga
      121 catggtcgtg ccttccccct ccacgctcgc cacctccagc cggtgcccca tcagctcgca
      181 gagcgagcgc gagatggcga gccccaggcc ggttccgccg aaccgccgcg tgatcatcga
      241 ctccgcctgt tcgaacacgt tgaagatcgc gtcgagccgg ccgggtggaa tgccgatgcc
      301 ggtgtcgcgc acctccaacc gggtggcccg ccccgcgccg tccgtctcga gccgcacgac
      361 gacctcgccc tcctcggtga acttgagggc gttgccgatg agattgatga gcacctgctt
      421 catgcgcgcg gcgtccgtct ccaccggcag cacgcgcgcg ggcagctcgg cgcgcagcgc
      481 caccgagtgg tcgcgcgcct gtccctcgat ctccgccacg gtctcgcgca ccagcaggtc
      541 cagcgcgacc gcgctcacct ccagcgtcat gtgtcccgcc tcgatcttcg acaggtcgag
      601 gatgtcgttg atcaggccga gcaggtgccg cccgttcgcc gcgatgcggg tgaggaagga
      661 gaggtcggtg tcctggaacg cgcccgactt gttcttgagg aggacgttgg cgaagccgat
      721 gatcgagttc agcggggtgc gcagctcgtg gctcatgcgg gcgaggaaat cgctcttcgc
      781 ccggttcgcc gcctcggcgg cgtcgcgcgc cacgatgagc tcgagctccc cgcgccgccg
      841 ggcgctgatg tcgcggaagt tcaccaccgc gccggagacg cggccctgct cgcgcaccgg
      901 cgacgcggcg tattccacct cgagcgggat gccgtccttc cgccacatca cctcgtcgtc
      961 cacctggcag ggaatgccct gggtcgcggc gcggtggacc gggcactgct ccgcggggta
     1021 cgcggtgccg tcgcggtgcg agtagtgggt gacctcgtgc atcacgcggc ccaccagctc
     1081 ctccggctcg tagcccagca tctcggagcc gcggcgattg acgaaggtca cgacaccgcg
     1141 cgcgtcgagc ccgtacaccc cttcgcccga ggcgtcgagc agttggcgga tattcgtcgc
     1201 cagacgctgg cgctcctcgt cggcggcccg gcgctcggtc acgtcgcgca gcgtgccggt
     1261 ggtgccgcag aaccgaccca gctcgtcgtg cagcgcgcgc gtgctcgcct ccacccagcg
     1321 gtagcccccc tcgcgccgga agtagcgcac ctccaccacg gagtgctgga cgcggccctc
     1381 cgcgagcggc cggaaggcat cgaggagcag cgcccggtcg gaggggtggg cgtaggcgag
     1441 gaagtgcgcg ccgatgctct cctccaccgg atggccggtg aggctgatcc acgcgggatt
     1501 gaggaaggtc cagaggccgt gcgcgtcggt gcggaagaag acgtcctgga gctgctcgat
     1561 caccgaccgg tacttctgct cgctgcgcac gagggcgtcc tgcgcctcgt accggtcggt
     1621 gacgtcgtgc accagcacca tgcgcgcggg tcgaccgtcg aactccagcg ggtacgagct
     1681 gatctcgacg cgccgcagct ggcccgactt cgtgcggtgc agtgccgcgc tcgcgaactg
     1741 ctcggtgccc ggcgtgccgg ccagcagccg gtcgaggttc gcctgctcgt ccgggggccg
     1801 gatgtcgcgc agcgtcatcc cgaggaactc ctcccgcgtc cagccgtagc tccgcaccgc
     1861 cgcctcgttg acctcgagga agcggagcgt ctcgctgtcg tagacccagg cggactgggg
     1921 cgagagggcg aagaggggct ggtagtcggc gtccgcccgc ctgcccgccg gctgggcgga
     1981 ggactggtcg gatgcgccgg gcgtcgtgga cggggcagcc atcacgggtg gtaggaggag
     2041 cgaaccttcg actatcttgc cacgcgttcg cctcgtgcgc gagatgccct ctcgcgatcc
     2101 ccatgcccgc cgagacatgc ccgtcgtgcc cttcgagaac ctccccgacg catcccgagt
     2161 ctggatcttc ggcagcgacc ggccgttgac cgaggagggg accaccgcgc tcctaaaggg
     2221 agtggacgag cacctgaccg gctggaaggc gcacggcgag ccgctcacgg tggggagcca
     2281 gctgcgtgac gatcgcttcc tcgtcatcgc cgtggaccag agctcggcgg gtgccaccgg
     2341 ctgctccatc gacggcctgt tccgcgtgct gcagggtctc gagccgacgg taggagcgag
     2401 cctcgtgggc gggggcaggg tgttctaccg ggacaatcac gccgcggtgc agagcacgac
     2461 gcgcgaccag attccggagc tcgtgaggtc gggggcgatc acgaaggaca cggtggtgtt
     2521 cgacacgagc ctcacggacc tcggcgcctt ccgctccggc ttcgagaagc gggcgaagga
     2581 gagctggatc aagggaatga tgggggaacg gtgaacggag aaccgtgaac ggagaaccgt
     2641 gaacggagaa ccgtgaacgg tgaacggtga a
//
LOCUS       DASSYW010000644         4051 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_910540, whole genome shotgun sequence.
ACCESSION   DASSYW010000644 DASSYW010000000
VERSION     DASSYW010000644.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4051)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4051)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4051
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_910540"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..342)
                     /locus_tag="VFN38_10345"
     CDS             complement(<1..342)
                     /locus_tag="VFN38_10345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012203.1"
                     /translation="MSSPLVVRSLAVMVLALGAARAHAQRESRSATVSVSLTVLPQVA
                     FDGGSERPLSAEVLPGQAVRVSPSAGVRTRMTYNAATQVRVSGGPLVGPGGAVVQVRF
                     VCAFGGGMTVSA"
     gene            complement(476..3067)
                     /locus_tag="VFN38_10350"
     CDS             complement(476..3067)
                     /locus_tag="VFN38_10350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012204.1"
                     /translation="MTSGVAARAPRAGTRTSRCRARLAIALALGAAWAPGLRAQATPA
                     GFEQGIFELRVARVASETVPALLSPSGIVLVPIDRVIALTQVPSRHADSSFSVERARN
                     GGWATLDLRGRRILDGSTALPLGAEELVRADGVHYLATARVGQLLGARVEADLGQLAV
                     TMTRVPPFPVEQAAARAQRTASGVARRGAATTAETPFIPRSGGAVVDWTASSVGSART
                     FGSSTASLRSATALYGGDLTAGVGFAGDGTGGVRTGATEVSYRRGLPGNAYLRQFQLG
                     DILGGGSQLRSFRGVTFTNARLVTDPSFGSIPVDLSLPQGWQYEIYQDNQLIGFSDAG
                     PRAPVYVPLRYGTTPVQVRLVSPTGDETIRDYSYLIPQTQQQPGRFEYTAGGGRCAFT
                     CTGLAFAQTSYGVTPWLSLSLGGERATIDSVTRTRPEGGVSLLSYSGWNAQFQAAQGS
                     FTRASLLYGGGGPLIGSGVFSRTSLGADQPSVIAAVDQTRWIFDGQLHLRTAPDQQVS
                     GWRLDNTLEGVASGSPDRTRSALSAELRGGSVGVSYETDRTRALREAGIMALAVLPAS
                     WHVSSGLASVLFDERSFHAFELATSMQFGRRGASALTLRWQRGTGMVLSLGFNGALSA
                     MRLTSRLSASRTQPTYLATSASGAVALDGTHRPTAFEGPGVGLSGVAGRVFYDVNADG
                     RFDAGDLPAAGVRVVVSGAQVRSDSSGAYHAWSVVPYEPSAIAIDTLAFTDFSWTLLR
                     GRTSLRATPGTFNRIDFPLVRTRELAGSVVGDSSIATVGGVTLLLTSESGGITHRMVT
                     YSDGTFYLSRVLPGRYTLSVAPTALEALHAATEPAVMPVEVAIVADDPVLTLAPLRLR
                     RRDEPRR"
     gene            complement(3064..3897)
                     /locus_tag="VFN38_10355"
     CDS             complement(3064..3897)
                     /locus_tag="VFN38_10355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012205.1"
                     /translation="MRISPRLLVLAALLALSPAAARAVTVSPNALFIDSRTRSGVLTL
                     YNPGTTAEEIEITFAFGYPRSDLAGAITVALADSAPAGEPSVLGFVRAFPRRLRLEPG
                     QRQTVRILMQPPAGLPEGEYWGRVLIHSRGGRPPVEQQQGGIHMQIDLETVIVGAVNY
                     RNGTMRTGVAVDSARAAIVAAGDSVRVVADLRRLGNAAYLGHMTLELVGADGKVIGSV
                     EEDLAAYRTLRKVESIAIPSRTSLVGASVRYRFSTERPDIDPESRLAAEPVTGSIALV
                     R"
BASE COUNT          606 a         1482 c         1474 g          489 t
ORIGIN      
        1 cgccgacacc gtcatgccgc cgccgaacgc gcacacgaag cgtacctgca ccacggcgcc
       61 ccccggaccc accagcggac cgccggacac gcgcacctgg gtcgccgcat tgtaggtcat
      121 ccgcgtgcga acgcccgccg acggactcac gcgcaccgcc tgtccaggca gcacctcggc
      181 cgacaacgga cgctcgctcc ccccgtcgaa cgcgacctgc ggcagcacgg tcagcgacac
      241 cgacacggtg gccgaacggg actcccgctg cgcgtgcgcg cgcgccgcgc ccagggcgag
      301 caccatcacg gcgagcgaac ggaccaccaa cggcgacgac atcgcgaccc cggaaggctc
      361 ccgcgcggcg gcaccggcgg cgctgcatca gcggggagat ccttctgagc atcgcgcctc
      421 cgcgcgatcc atgccaccca ctgtcgcgtt tcgtcccgct ggcgccggcc gcggatcagc
      481 gccgaggctc gtcgcggcgg cgcagccgga gcggagcgag cgtcagcacc ggatcgtccg
      541 ccacgatcgc gacctccacc ggcatcacgg ccggctccgt cgccgcgtgc agcgcctcga
      601 gcgcggtcgg cgccaccgag agcgtgtatc gccccggcag cacgcggctc aggtagaagg
      661 tgccgtcgga atacgtcacc atgcgatgcg tgatgccgcc cgattcgctc gtcaggagca
      721 gcgtcacccc gccgacggtg gcgatcgagc tgtcgcccac gaccgagccc gcgagctcgc
      781 gcgtgcggac gagcgggaag tcgatgcgat tgaaggtgcc cggcgtcgca cgcagcgagg
      841 tgcgcccccg cagcagcgtc cacgagaagt cggtgaaggc gagggtgtcg atcgcgatgg
      901 ccgagggctc gtacggcacc acgctccacg catggtacgc tcccgatgaa tcggaacgca
      961 cctgcgcacc gctcaccacc acgcgcaccc cggccgcggg caggtcgccg gcgtcgaatc
     1021 gcccgtccgc gttgacgtcg tagaagacgc gccccgcgac gccggacagt cccacgcccg
     1081 ggccctcgaa cgcggtcggc cggtgcgtgc cgtcgagcgc caccgcgccg ctcgcggagg
     1141 tggcgagata ggtcggctgc gtccgcgacg ccgacagccg tgaggtgagc cgcatggcgc
     1201 tgagcgcgcc gttgaagccg aggctcagca ccatgccggt gccgcgctgc caccgcagcg
     1261 tcaacgccga cgcgccccgg cgcccgaact gcatcgacgt cgcgagctcg aacgcgtgga
     1321 acgaccgctc gtcgaagagc acgctcgcca gcccggagct cacatgccac gaggcgggca
     1381 gcacggcgag ggccatgatg ccggcctcgc gcaaggcgcg cgtacggtcc gtctcgtacg
     1441 agacgccgac gctgccgccg cgcagctcgg cggaaagtgc gctgcgggtg cggtcggggc
     1501 tgcccgaggc gacgccctcg agcgtgttgt cgagccgcca gccgctcacc tgctggtcgg
     1561 gtgccgtccg aagatgcagc tggccgtcga agatccagcg cgtctggtcg accgcggcga
     1621 tgacggaggg ctggtcggcg ccgagcgagg tgcgcgagaa caccccggag ccgatgagcg
     1681 ggccgccgcc gccgtagagg agactggcac gggtgaagct tccctgcgcc gcctggaact
     1741 gcgcgttcca tcccgaatag ctcaacaggc tcacgccccc ttcggggcgg gtccgcgtca
     1801 cgctgtcgat cgtcgcgcgc tcgccgccca gggagaggct cagccacggc gtcacgccgt
     1861 acgacgtctg cgcgaacgcg agcccggtgc aggtgaacgc gcaccggccg ccccccgccg
     1921 tgtactcgaa gcggcccggc tgctgctgcg tctgcgggat gagatagctg tagtcgcgga
     1981 tcgtctcgtc accggttggg ctcactaggc gaacctgcac cggcgtggtg ccgtagcgca
     2041 gcggcacgta caccggcgcg cgcgggccgg cgtccgagaa gccgatgagc tggttgtcct
     2101 gatagatctc gtactgccaa ccctgcggca ggctgaggtc caccggtatg ctgccgaacg
     2161 acggatcggt gacgagccgc gcgttggtga acgtcacgcc ccggaagctg cgcagctgcg
     2221 atccgccacc gaggatgtcg ccgagctgga actgccgcag gtacgcgttg cccggcagcc
     2281 cgcggcgata gctgacctcc gtcgcgccgg tgcgcacgcc gccggtgccg tcgcccgcga
     2341 acccgacgcc ggcggtcaga tcgccgccgt agagcgccgt cgcgctgcgc agggaggccg
     2401 tgctgctgcc gaaggtgcgc gcgctcccca cgctggacgc ggtccagtcg acgaccgcgc
     2461 ccccgctgcg cgggatgaag ggcgtctcgg ccgtggtggc cgcgccgcgg cgggccacac
     2521 cgctcgcggt gcgctgggcg cgtgccgccg cctgctcaac ggggaagggc ggcacgcgcg
     2581 tcatcgtgac ggcgagctgg cccagatcgg cctcgaccct ggcgccgagc agctgcccca
     2641 cgcgagccgt cgcgaggtag tggacgccgt ccgcgcgcac gagctcctcg gcgccgagcg
     2701 gcagcgcggt gctcccgtcc aggatgcgcc gcccgcgcag gtcgagcgtg gcccagccac
     2761 cgttgcgggc gcgctccacg ctgaacgagg agtcggcgtg gcgcgacggc acctgcgtga
     2821 gggcgatgac gcgatcgatc ggcaccagca cgatgccgct cggcgacaac agggccggca
     2881 ccgtctcgct ggcgacgcgc gccacgcgca gctcgaagat gccctgctcg aagccggccg
     2941 gcgtggcctg cgcgcgcagg ccaggcgccc atgccgcgcc cagtgcgagc gcgatcgcca
     3001 ggcgcgcgcg gcaccgcgac gtacgggtgc cggcgcgcgg cgcgcgcgcg gccaccccgg
     3061 acgtcaccgc accagcgcga tcgacccggt caccggctcg gcggcgagcc gcgattccgg
     3121 atcgatgtcg ggtcgctcgg tggagaagcg gtatcgaacc gatgcgccca cgagcgacgt
     3181 gcgcgaggga atcgcgatcg attccacctt gcgcagcgtg cgataggcgg cgaggtcctc
     3241 ctcgaccgat ccgatcacct tgccgtccgc gcccacgagc tcgagggtca tgtgacccag
     3301 gtacgcggcg ttgccgagcc ggcgaagatc ggccacgacg cgcacgctgt cgccagcggc
     3361 gacgatcgcg gcgcgcgccg aatcgacggc cacgccggtg cgcatcgttc cattgcggta
     3421 gttcaccgcg ccgacgatga ccgtctcgag gtcgatctgc atgtggatgc cgccctgctg
     3481 ttgctcgacc ggcggccgtc cgccgcgcga gtggatcagc acgcgtcccc agtactcacc
     3541 ctccggcagg ccggcggggg gctgcatgag gatgcgcacc gtctgccgct gaccgggctc
     3601 gagccgcagg cggcggggaa aggcacgcac gaagccgagc accgacggct cgccggccgg
     3661 cgcgctgtcg gccagcgcca ccgtgatcgc gccggcgaga tcggatcgcg gatagccgaa
     3721 ggcgaaggtg atctcgatct cctccgccgt cgtgccggga ttgtagagcg tgagcacgcc
     3781 ggagcgcgtc cggctgtcga tgaacagcgc gttggggctc accgtgaccg cgcgggccgc
     3841 cgcgggggag agggcgagca gcgcggcgag aacgagcagg cggggcgaaa tacgcatgga
     3901 ggccctcggc gggcgatcag aacttggtag acgagacgat gacggtcatc gtcgcggagt
     3961 agaggcccgc gcgctggttc gtcgcgggca cggcgcggcc gccgatgagg agcgtggcgg
     4021 ttcccttgcc gagattgacg cgcacggagg t
//
LOCUS       DASSYW010000645         2135 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1615487, whole genome shotgun sequence.
ACCESSION   DASSYW010000645 DASSYW010000000
VERSION     DASSYW010000645.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2135)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2135)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2135
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1615487"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1275)
                     /locus_tag="VFN38_10360"
     CDS             complement(<1..1275)
                     /locus_tag="VFN38_10360"
                     /inference="COORDINATES: protein motif:HMM:NF020390.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1800 domain-containing protein"
                     /protein_id="HET9012206.1"
                     /translation="MPQPWSEKHVRRLFWRAGFGATPEEARRWADAGQDATVRFLLAG
                     GAMLTGPAPRVNGGPLDPVNEWGHDVLWWLDRMVRSRRPLAEKMTLFWHDHFATSGQE
                     TPLMLAQNRTLRRHALGSFPVLLRAITTDPAMQLFLSLANSSRLAPNENYARELMELF
                     TLGRGYTERDIREAARALTGFRLEWNDGFDRIWFDRTWHDRGVKRILGKRGRFGWRDV
                     LRIVTSHKGHAPFLVDKLWSYFVSVPLDAGTRRALTRTYRRSGLRIKPVVEAILRHPA
                     LYAELDRPDMVKSPVVFLAGAIRSVGGAIQRDDWAWLLYEMGQYPFDPPSVAGWDWGG
                     AWLSTNTVHARFNAITYVTHEHGPLPYVEGSAPLKGTADEAVARARAAVGDPWTSPQT
                     DAALERMAEGFFDDFKPRQTWGWQVRSDQREQA"
     gene            1336..>2135
                     /locus_tag="VFN38_10365"
     CDS             1336..>2135
                     /locus_tag="VFN38_10365"
                     /inference="COORDINATES: protein motif:HMM:NF012958.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase-fold protein"
                     /protein_id="HET9012207.1"
                     /translation="MRLPFRVLAAVAAAALAAGVVVAAGEEPDRHGARLVTFTVRSEL
                     VSRNLTARAVVPAGVGDGERRPLLVFLHGRGGRPGDVFGANFYGQLRELGDRAPVVVA
                     FDGGDHSYWHDRRSGRWGSYVMREALPEALRRLPADPRRVAIGGISMGGFGALDLARL
                     HPRRFCAVGGHSAALWLRSGDSAPGAFDGVADYARHDVLGYVRRRAHPYAGIPIWLDH
                     GRSDPFVPANQALVRALRRRGADVTHRVYAGAHTGAYWRRHIDEYLRF"
BASE COUNT          268 a          750 c          817 g          300 t
ORIGIN      
        1 ggcctgctcg cgctggtcgg agcgcacctg ccagccccag gtctggcgcg gcttgaagtc
       61 gtcgaagaag ccctccgcca tccgctcgag cgcggcgtcg gtctggggcg aggtccacgg
      121 gtcgccgact gccgcgcgcg ccctcgcgac ggcctcgtcg gcggtgccct tgagcggtgc
      181 gctgccctcg acgtacggca gcgggccgtg ctcgtgggtg acgtaggtga tcgcgttgaa
      241 gcgggcatgc acggtgttgg tcgagagcca ggcgccgccc cagtcccagc cggccacgct
      301 cggcgggtcg aacgggtact ggcccatctc gtagagcagc caggcccagt cgtcgcgctg
      361 gatcgcgccg ccgaccgaac ggatcgcccc ggccaggaag acgacgggcg acttgaccat
      421 gtcggggcgg tcgagctcgg cgtagagcgc cgggtggcgg aggatcgcct cgacgaccgg
      481 cttgatgcgc aggcccgagc gccggtaggt gcgcgtgagc gctcggcgcg tcccggcatc
      541 cagcggcacg ctgacgaagt agctccagag cttgtcgacg aggaacggcg cgtggccctt
      601 gtgcgaggtc acgatccgca gcacgtcgcg ccagccgaag cggccgcgct tgccgaggat
      661 ccgcttcacg ccgcggtcgt gccaggtgcg gtcgaaccag atccggtcga agccgtcgtt
      721 ccactccagg cggaagccgg tcagcgcccg ggcggcctcg cggatgtcgc gctcggtgta
      781 cccgcggccg agcgtgaaga gctccatcag ctcgcgtgca tagttctcgt tcggggcgag
      841 gcggctcgag ttggcgagcg acaggaagag ctgcatcgcc ggatcggtcg tgatcgcgcg
      901 cagcagcacc gggaagctgc cgagcgcgtg gcggcgcagc gtccggttct gcgcgagcat
      961 cagcggcgtc tcctggccgg acgtcgcgaa gtggtcgtgc cagaagagcg tcatcttctc
     1021 ggcgagcggg cgccggctgc ggaccatccg gtcgagccac cagagcacgt cgtggcccca
     1081 ctcgttgacc gggtcgagcg ggccgccgtt cacgcgcggc gcggggccgg tcagcatcgc
     1141 gccccctgcc agcaggaagc ggacggtggc gtcctggccg gcatccgccc agcggcgggc
     1201 ctcctcgggc gtggcgccga atccggcgcg ccagaagagg cgtcgtacgt gcttctcgga
     1261 ccagggctgc ggcatcgggc ggtacgagcg tgcatcggct cccccggacg gccgcttgag
     1321 cgggacaatg ggtccatgag gctgccgttc agggtcctgg cggcggttgc cgccgcggcg
     1381 cttgccgccg gtgtcgtggt ggccgcgggc gaggagccgg accggcacgg ggcacggctc
     1441 gtgacgttca ccgtgaggag cgagctggtg agccgtaacc tcacggcgcg ggcggtagtt
     1501 cccgccgggg tgggcgacgg cgagcggcgg ccactgctcg tcttcttgca cggccgcggc
     1561 ggccggcccg gcgacgtctt cggggcgaac ttctacgggc agctacgcga gctcggcgac
     1621 cgcgccccgg tggtggtggc gttcgacggc ggcgaccaca gctactggca cgaccgccgc
     1681 agcggccgct gggggtcgta cgtgatgcgc gaggcgctgc ccgaggcgct ccggcggctg
     1741 ccggccgacc cgcgccgcgt cgcgatcggc gggatctcca tgggcggctt cggggcgctc
     1801 gacctcgccc gccttcaccc gcgacgcttc tgtgcagtag gcgggcactc ggcggcgctc
     1861 tggctgcgct cgggcgacag cgccccggga gcattcgacg gcgtggcgga ctacgcccgc
     1921 cacgacgtcc tcggttacgt gcggcgccgg gcgcatccct acgcgggcat cccgatctgg
     1981 ctcgaccacg gccgctcgga cccgttcgtg cccgcgaacc aggcgctcgt gcgggcgcta
     2041 cgccgccgcg gggccgacgt gactcaccgg gtctacgccg gagcccacac gggcgcctac
     2101 tggcgccgcc acatcgacga gtacctgcgc ttcta
//
LOCUS       DASSYW010000646         2237 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_572874, whole genome shotgun sequence.
ACCESSION   DASSYW010000646 DASSYW010000000
VERSION     DASSYW010000646.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2237)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2237)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2237
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_572874"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            445..>2237
                     /locus_tag="VFN38_10370"
     CDS             445..>2237
                     /locus_tag="VFN38_10370"
                     /inference="COORDINATES: protein motif:HMM:NF040138.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PKD domain-containing protein"
                     /protein_id="HET9012208.1"
                     /translation="MASLSLLSRRVPGGRILGIASLLLLTVCENPVAPPSESMSPGTA
                     RRSDLAGPAVVLVGAGNIASCANDNDLLTSQILDTIPGTVVTFGDNDRRNSATGVLDF
                     GTCYTPSWGGHKARTRPAAGDREYLAPGPADYYAYFGAAAGEPDKGYYSYEAGDWHVV
                     VLNTELPHIAGSAQEQWLRADLSANTKRCTLAYWDAPRYFTQGTSGFKPSLDAVWTDL
                     YNAGVELVLNGHSGFYERFAPQRPNAEADPTYGIRQIIVGTGGGPTNSFSSTISWPNS
                     EVRSTGTAGVIKLTLSADGYAWQFIPVAGKTFTDAGTGSCHDSPMTQANPGGPYFSEG
                     TVAFDGSHSFDPQREYPLTYAWDFGDGTTGTGVQPAHAYAEGTYTVTLVATDAAGNSS
                     QPASTTATIGNLAPTVSATSSAWARAGQSLTLSASLSDPGTDDAPWSYRIDWGDGSVA
                     ETGSLSSLDDALSASHAYASIGDYTATIAVTDKDGATGTATIAVAISNTATPAVILAA
                     GDISACFNNNDEATAKVLDGLAGTVFTLGDNAYPNGAAGDFSNCYEPTWGRHKGRTYA
                     TLGNHDYDLGNANAIFDYFGARAGPRGKGYY"
BASE COUNT          369 a          824 c          740 g          304 t
ORIGIN      
        1 tgacccggtc gcgacgagcg gacggttgcg ccgcctcacg tcccgtgcct catcccggag
       61 aatggccact ccgcaccggg aggcgctgcc tgagggcacg cgcagatgtt tgaccgggtc
      121 gggcccagcg agacgcggtt ccgcgggccc cggctgttgt acgcgtgtcg cactgtgtgg
      181 cgggggcacc gcaaccggcg gggagcatcc cggggcgtca gcgtggtgca catcggcaat
      241 tggctgcgag ggaaggagtt acgcggtggg tcacccatcg ctgcgtggcc tgcggacggc
      301 gcatgcaacg tgcgtggcag cggaacgtgc cgcccggcgc cgtccggcac gcagtccctc
      361 ccttttggcg cgtacgtgcg cacaccagat ctccaggtcg cggtgtgcgt ttactctgct
      421 gcgcgcgtcc gcgaaggatc atccatggct tccctgtccc ttctctcgcg gcgcgtaccc
      481 ggcggccgca tcctcggcat cgcctcgctt ctgctgctca ccgtgtgcga gaatccggtg
      541 gcaccgccga gcgagagcat gtcaccgggt accgcgcgcc ggtccgacct cgccggtccc
      601 gccgtcgtgc tcgtgggagc gggcaacatc gcctcctgcg cgaacgacaa cgacctgctg
      661 acctcccaga ttctcgacac catcccgggc acggtcgtca ccttcgggga caacgaccgc
      721 cgcaacagcg ccaccggcgt gctggacttc gggacctgct acaccccgag ctggggaggg
      781 cacaaggccc ggacgcggcc ggcggccggc gaccgggagt acctcgcgcc tggtcccgcg
      841 gactactacg cgtacttcgg ggcggccgcc ggcgagccgg acaagggcta ctacagctac
      901 gaggcgggag actggcacgt cgtcgtgctg aacaccgagc tgccgcacat cgccggcagc
      961 gcccaggagc agtggctccg ggccgacctc agcgccaaca ccaagcgctg caccctggcc
     1021 tactgggacg cgcccaggta cttcacgcag ggcacgtccg gcttcaagcc cagcctcgac
     1081 gcggtctgga ccgaccttta taacgccggg gtggagctcg tgctcaatgg gcacagcggc
     1141 ttctacgagc ggttcgcccc ccagcgaccc aacgccgagg cggatccgac ctacggcatc
     1201 cgccagatca tcgtcggcac ggggggcggc ccgaccaaca gcttcagcag caccatctcg
     1261 tggccgaaca gcgaggtgcg cagcaccggc acggcgggcg tcatcaagct caccctctcc
     1321 gccgacggct acgcctggca gttcatcccg gtcgcgggaa agaccttcac ggatgccggc
     1381 accggcagct gtcacgacag cccgatgacc caggccaatc ccggcggccc ctacttctcc
     1441 gaggggacgg tcgcgttcga cggcagccac tccttcgatc cgcagcggga gtatccgctc
     1501 acctacgcct gggacttcgg cgacgggacc acggggacgg gggttcagcc cgcgcatgcg
     1561 tacgccgagg gcacctacac cgtgacactc gtcgcgacgg acgccgcggg gaactcgagc
     1621 caaccggctt ccaccaccgc gacgatcgga aacctcgcgc cgacggtgag cgcgacgagc
     1681 agcgcgtggg cgcgcgcagg ccagtcgctc accctcagcg cctcgctgag cgatcccggc
     1741 accgacgacg caccgtggag ctaccggatc gactggggtg acggcagcgt cgcggaaacc
     1801 ggctcgctgt cctcgctgga cgatgcgctg tcggccagcc acgcctacgc gagcatcggc
     1861 gactacaccg cgacgatcgc cgtcacggac aaggacggcg ccaccggcac cgcgaccatc
     1921 gcggtggcca tctccaacac ggcgacgccg gcggtgatcc tcgccgcggg cgacatctcg
     1981 gcctgtttca acaacaacga cgaagcgacg gcgaaagtgc tcgacgggct cgccggcacg
     2041 gtgttcaccc tcggcgacaa cgcgtacccc aacggcgccg cgggcgactt cagcaactgt
     2101 tacgagccca cgtggggccg gcacaagggg cgcacctacg ccacgcttgg caaccacgac
     2161 tacgacctcg gcaacgccaa tgcgatcttc gactacttcg gcgcccgcgc ggggccgcgc
     2221 ggcaagggct actacag
//
LOCUS       DASSYW010000647         2322 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1733514, whole genome shotgun sequence.
ACCESSION   DASSYW010000647 DASSYW010000000
VERSION     DASSYW010000647.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2322)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2322)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2322
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1733514"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..613)
                     /locus_tag="VFN38_10375"
     CDS             complement(<1..613)
                     /locus_tag="VFN38_10375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HET9012209.1"
                     /translation="MSLPGAAECRVWTWGWEYGDGRRRSGVLQMPHTTTRRMAIALGT
                     CGVLAATAGAFATTERAIELAVIVFLALAGGAIAVAAYRASARGRRGRNAAEEALRAA
                     EERFHAIFDQAFQFTLLLTPGGEVVEANETARAFYDGAHDTLLGRRLWELPAWSERGH
                     EVLRSAVGSAAGGAFVRLEETARGTDGRTVTFDMSFKPMRTAGG"
     gene            761..1168
                     /locus_tag="VFN38_10380"
     CDS             761..1168
                     /locus_tag="VFN38_10380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012210.1"
                     /translation="MSEYTVVASRGANAAGEARGRSVAIPRETQRDGQLDALAPVELL
                     LAAIAAGVLGGAECAAEALSFSVTAAVVRVRGRYEDGVAPRLAVDYDLAISTDEPDGR
                     LVQFHEFLRRSECMKLLGAAGAPLTGCLRRRPS"
     gene            complement(1137..>2322)
                     /locus_tag="VFN38_10385"
     CDS             complement(1137..>2322)
                     /locus_tag="VFN38_10385"
                     /inference="COORDINATES: protein motif:HMM:NF012892.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HET9012211.1"
                     /translation="EPQPAYGLADERDLVLAGFLAFRDPPLPGAADVARALARDGVRI
                     LVLSGDEGVITERVCAEVGLTGEPVVLGAEVDRMTDHALAHVAERSTGFARLSPGQKT
                     RVIAALRSRSHVVGFLGDGINDAPALRAADVGISVSAAADVAKDAADVILTERGLAVL
                     HAGIVEGRTAFGNTMKYLLMGTSSNFGNMFSMAVASVALPFLPMLPTQILLNNFLYDA
                     AQITIPTDRVDPEYVARPHRWDVRMLRDFMLVVGPVSSLFDILTFVVLLKLFHASAAT
                     FHTGWFVESLATQTLVLFCIRTARSPLRSRPSRALAASVLGVVAVGLLLPFTPLAAPL
                     GFVALPAAFYLYLAVATAAYLTLADLVKRPLMRRMLRGSGGAAAPERPGGARTAGAAG
                     TP"
BASE COUNT          329 a          851 c          858 g          284 t
ORIGIN      
        1 gcccccccgc ggtgcgcatc ggcttgaacg acatgtcgaa ggtgacggtg cggccgtccg
       61 tgccgcgcgc cgtctcctcg aggcgcacga aggcgccccc ggccgccgac ccgaccgccg
      121 accgcagcac ctcgtgccct cgctcgctcc aggcggggag ctcccagagc cgtcggccga
      181 gcagggtgtc gtgggcgccg tcgtagaagg cgcgcgccgt ctcgttcgcc tcgacgacct
      241 cgccgcccgg cgtgaggagg agggtgaact ggaaggcctg gtcgaagatc gcgtggaagc
      301 gctcttccgc cgcgcgcagc gcttcttccg cggcgttgcg tccgcggcgg ccacgcgcgc
      361 tggcgcggta ggccgccacg gcgatcgctc ctcccgccag ggccaggaag acgatgacgg
      421 cgagctcgat cgcgcgctcc gtcgtcgcga acgcgccggc ggtggcggcg agaacgccgc
      481 aggtgcccaa cgcgatcgcc atcctgcgag tggtcgtgtg cggcatctgc agcactcctg
      541 atcgccggcg tccgtccccg tactcccatc cccacgtcca cacccggcac tccgccgcgc
      601 ccggcaggct cacggaacga atgtacggcg ggacgccgcc actgccaccc cggcgcgatc
      661 caccgacagc gttcgcctga cagacccctt ccgtcccgcc gccgacattg gctcccggcc
      721 ggcacgcacg atcccatccc gttccgggga gcggaggacg atgtctgagt atacggtcgt
      781 cgccagccgc ggcgcgaacg ccgccggcga ggcgcgcggc agatcggtcg ccatcccgcg
      841 cgagacgcag cgggacgggc agctcgacgc gctggccccc gtcgagctcc tcctcgcggc
      901 gatcgccgcg ggcgtgctcg gcggcgcgga gtgcgcggcc gaagcgctct cgttcagcgt
      961 cacggccgcc gtcgtccggg tgcgcggcag gtacgaggat ggggtcgcgc cgcggctcgc
     1021 cgtcgactac gacctcgcca tctccaccga cgaacccgac gggcgcctcg tgcagttcca
     1081 cgaatttctg cgccgctccg agtgcatgaa gctgctggga gcggccggcg ccccgctcac
     1141 ggggtgcctg cggcgccggc cgtcctagcg cccccgggcc gctcaggggc ggccgcccca
     1201 ccgctgccgc gcagcatgcg ccgcatcagc ggccgcttga cgaggtcggc gagcgtcagg
     1261 taggccgcgg tcgcgacggc gagatagagg tagaaggccg ccggcagcgc gacgaagccg
     1321 agcggcgcgg cgagcggcgt gaacgggagc agcaacccca ccgccaccac gccgagcacc
     1381 gaggccgcca gggcgcggct cggccggctg cgcagcgggc tgcgcgccgt gcggatgcag
     1441 aagaggacga gcgtctgcgt cgccagcgac tccacgaacc agccggtgtg gaaggtggcc
     1501 gccgaggcgt ggaagagctt cagcaggacg acgaaggtga ggatgtcgaa gagcgagctc
     1561 accggcccga cgacgagcat gaagtcgcgc agcatccgca cgtcccagcg gtgcggacgc
     1621 gccacgtatt ccggatccac cctgtcggtc gggatcgtga tctgggccgc gtcgtagagg
     1681 aagttgttga gcaggatctg ggtcggcagc atcggcagga aggggagcgc caccgaggcg
     1741 accgccatgc tgaacatgtt gccgaagttg gagctggtgc ccatcagcag gtacttcatc
     1801 gtgttgccga acgccgtgcg cccctcgacg atcccggcgt ggaggacggc gagcccgcgc
     1861 tcggtgagga tgacgtcggc ggcgtccttc gccacgtcgg ccgccgcgga gacggagatg
     1921 ccgacgtcgg ccgcgcggag ggccggcgcg tcgttgatcc cgtcgccgag gaagccgacc
     1981 acgtggctgc ggctccgcag cgcggcgatg acgcgcgtct tctggcctgg cgacagccgc
     2041 gcgaacccgg tcgagcgctc ggcgacgtgg gcgagcgcgt ggtcggtcat ccggtccacc
     2101 tccgcgccga ggacgacggg ctccccggtg agcccgacct cggcgcacac ccgctccgtg
     2161 atcaccccct cgtcgccgct caggacgagg atgcgcacgc cgtcgcgcgc cagcgcccgc
     2221 gcgacgtcgg cggcgccggg caggggaggg tcgcggaagg cgaggaagcc ggcgagcacg
     2281 agatcgcgct cgtcggccag cccgtaggcg ggctgcggct cg
//
LOCUS       DASSYW010000648         3094 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_618533, whole genome shotgun sequence.
ACCESSION   DASSYW010000648 DASSYW010000000
VERSION     DASSYW010000648.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3094)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3094)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3094
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_618533"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..541
                     /locus_tag="VFN38_10390"
     CDS             <1..541
                     /locus_tag="VFN38_10390"
                     /inference="COORDINATES: protein motif:HMM:NF024257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HET9012212.1"
                     /translation="TSYVFTDYLSKVSPAWAAKPGKGKEVQWPVGLGAKGNEGVAGQV
                     KQTPGAIGYTELAYATQNKLSTAAIRNPAGEFVAPTIASVTAAAAGAAARLPANTDYR
                     VSIVNAAGTGAYPISSFTWIIASAKQTDAAKGKKLVDFLRWAITDGQAMAAPLDYAPL
                     PDAMRAALTERIGSIELPK"
     gene            complement(542..1228)
                     /gene="phoU"
                     /locus_tag="VFN38_10395"
     CDS             complement(542..1228)
                     /gene="phoU"
                     /locus_tag="VFN38_10395"
                     /inference="COORDINATES: protein motif:HMM:TIGR02135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0051049 - regulation of transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate signaling complex protein PhoU"
                     /protein_id="HET9012213.1"
                     /translation="MTPTETPFRHFHDQLTALNRRLLAMSEKAEALVELSVEALLTKD
                     EGKAEAVIAADNELDTMEIEIEADALQLLALQQPMARDLRFIVSAIKVTSDLERVGDH
                     AVNIAQAAQRLISLRSTITPDPEILDMARRARAMLGDSIDAFLRADGALGRDVCARDD
                     QVDALHESMFRILLTHMMADPRTINPSLEYLLVSRNLERVADLATNIGEDAVFLAEGK
                     TIKHGGGAPR"
     gene            complement(1225..2022)
                     /gene="pstB"
                     /locus_tag="VFN38_10400"
     CDS             complement(1225..2022)
                     /gene="pstB"
                     /locus_tag="VFN38_10400"
                     /EC_number="7.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004060638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein
                     PstB"
                     /protein_id="HET9012214.1"
                     /translation="MSAAVEYGPVPDRRRAGRIEVEHFDFWYGKHQALFDINLQIAPR
                     AVTAFIGPSGCGKSTFLRSINRLNELIPGARRSGVIRLDGDDIYQKGMDVVTLRQRVG
                     MVFQRWNPFPKSIYDNVAYGPRINLDPPRRELDALVESALRRAALWDEVKDRLRGSAL
                     ALSGGQQQRLCIARALANDPEVLLLDEPASALDPSATQKVEELVYELKRELTIVIVTH
                     NLQQAARISDRTAFFYLGRLVEMEDTQQLFTSPREERTEAYITGRFG"
     gene            complement(2019..2858)
                     /gene="pstB"
                     /locus_tag="VFN38_10405"
     CDS             complement(2019..2858)
                     /gene="pstB"
                     /locus_tag="VFN38_10405"
                     /EC_number="7.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein
                     PstB"
                     /protein_id="HET9012215.1"
                     /translation="MTELVTLRAEGAPPVAAGGGAGPAGEVCAMRTVALNAFFGAVHA
                     VRDVTLDFPSNEVTAIIGPSGCGKSTLLRTLNRMHETVPGARVTGQVLFHGQDIYADG
                     VDPIALRRHVGMVFQRPTPFPTMSIRDNVAAGLRVQPGARPGRKEEDEIVERALRGAA
                     LWDEVKDRLRATATGISGGQQQRLCIARALATSPHVLLLDEPTASLDPLSTQKVEELV
                     YELRTSMTVIIVTHNMQQAARVSDRTVFMLSGEVVEAAPTRVMFTAPSDPRTESYITG
                     RFG"
     gene            complement(2851..>3094)
                     /locus_tag="VFN38_10410"
     CDS             complement(2851..>3094)
                     /locus_tag="VFN38_10410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phosphate ABC transporter permease PtsA"
                     /protein_id="HET9012216.1"
                     /translation="RVAGETAPLLFTAFGNQFWSTELTQPIAALPLQIFTYAISPYDD
                     WHAQAWAGALVLIALVLVISVVARFVTRARHGGGHD"
BASE COUNT          443 a         1080 c         1107 g          464 t
ORIGIN      
        1 cacgagctac gtcttcaccg actacctctc caaggtcagc ccggcgtggg ccgcgaagcc
       61 gggcaagggg aaggaggtgc agtggcccgt gggcctgggg gcgaagggga acgagggcgt
      121 ggccggccag gtgaagcaga cgccgggcgc catcgggtat accgagctcg cgtacgccac
      181 ccagaacaag ctctcgaccg cggcgatccg gaatccggcc ggggagttcg tcgcgccgac
      241 gatcgcgtcc gtcaccgcgg ccgcggccgg cgccgcggcc aggctgcccg ccaacacgga
      301 ctaccgggtc tccatcgtca acgcggcggg cacgggggcc tatcccatct cgtcgttcac
      361 ctggatcatc gcttcggcca agcagaccga cgcggcgaag gggaagaagc tggtggactt
      421 cctccggtgg gcgatcaccg atggccaggc gatggccgcg ccgctggact acgcgcccct
      481 gcccgacgcg atgcgcgcgg cgctcaccga gcggatcggc tcgatcgagc tcccgaagta
      541 gtcaccgcgg cgcgccgccg ccgtgcttga tggtcttccc ctcggcgagg aacaccgcgt
      601 cctcgccgat gttcgtcgcg aggtcggcca ctcgctcgag gttgcggctc acgagcaggt
      661 actcgagcga ggggttgatc gtccgcgggt cggccatcat gtgcgtgagg aggatgcgga
      721 acatcgactc gtggagcgcg tccacctggt cgtcgcgggc gcacacgtcg cgcccgagcg
      781 cgccgtcggc gcggaggaag gcgtcgatcg agtccccgag catggcgcgc gcgcggcgcg
      841 ccatgtccag gatctccgga tcgggggtga tggtggagcg cagcgagatc agccgctgcg
      901 ccgcctgcgc gatgttcacc gcgtggtccc ccacccgttc caggtcgctc gtcaccttga
      961 tggcgctgac gatgaagcgg aggtcgcgcg ccatcggctg ctgcagcgcg agcagctgca
     1021 gggcgtcggc ctcgatctcg atctccatcg tgtccagctc gttgtcggcg gcgatcaccg
     1081 cctcggcctt gccctcgtcc ttcgtgagga gcgcctcgac cgacagctcc accagggcct
     1141 ccgccttctc cgacatcgcc agcaggcggc ggttgagcgc cgtgagctga tcgtggaaat
     1201 ggcgaaacgg tgtttccgtt ggggtcatcc gaatctcccg gtgatgtagg cctcggtgcg
     1261 ctcctcgcgc gggctcgtga agagctgctg cgtgtcttcc atctcgacca gccggccgag
     1321 gtagaagaac gccgtgcggt cggagatgcg cgccgcctgc tgcaggttgt gcgtgacgat
     1381 gacgatcgtg agctcgcgct tcagctcgta caccagctcc tccaccttct gggtggcgct
     1441 cgggtcgagc gccgacgcgg gctcgtcgag caggagcacc tcggggtcgt tggcgagcgc
     1501 ccgcgcgatg cagagccgct gctgctggcc gccggagagg gccagcgcgc tcccccgcag
     1561 ccggtccttc acctcgtccc acagcgccgc ccggcgcagg gccgactcga cgagcgcgtc
     1621 gagctcccgc cgcggcgggt ccaggttgat gcgcggtccg tatgcgacgt tgtcgtagat
     1681 cgacttcgga aaggggttcc accgctggaa caccatcccg acgcgctgac gcagcgtgac
     1741 gacgtccatc cccttctggt agatgtcgtc gccgtccagc cggatcaccc ccgagcggcg
     1801 cgcgcccggg atcagctcgt tcagccggtt gatggagcgc aggaaggtgg acttgccgca
     1861 ccccgacggg ccgatgaacg cggtgacggc gcggggggcg atctggaggt tgatgtcgaa
     1921 cagcgcctgg tgcttcccgt accagaagtc gaagtgctcg acctcgatcc ggccggcgcg
     1981 gcgccggtcg gggacgggcc cgtactccac ggcggcgctc atccgaaccg gccggtgatg
     2041 tacgactcgg tgcgcggatc cgagggggcg gtgaacatga cgcgcgtcgg tgcggcctcc
     2101 accacctcgc cgctcagcat gaacaccgtg cggtcggaga cgcgggccgc ctgctgcatg
     2161 ttgtgcgtca cgatgatcac cgtcatcgac gtgcgcagct cgtacaccag ctcctccacc
     2221 ttctgggtgc tcagcggatc gagcgacgcg gtgggctcgt cgagcaggag gacgtggggc
     2281 gacgtcgcca gcgcccgcgc gatgcagagc cgctgctgct gcccccccga gatcccggtg
     2341 gcggtcgcgc ggaggcggtc cttcacctcg tcccacagcg cggcgccgcg cagcgcgcgc
     2401 tcgacgatct cgtcctcctc cttgcgcccg ggacgggcgc cgggctgcac ccggagcccc
     2461 gccgccacgt tgtcgcgaat cgacatcgtg gggaaggggg tcggccgctg gaacaccatc
     2521 ccgacgtggc gccgcagcgc gatcgggtcc accccgtcgg cgtagatgtc ctggccgtgg
     2581 aagagcacct ggccggtgac gcgcgccccc ggcaccgtct cgtgcatccg gttcagcgtg
     2641 cgcagcaggg tggacttccc gcatcccgac ggcccgatga tcgccgtgac ttcgttggac
     2701 gggaagtcga gcgtgacgtc gcgcaccgcg tggacggcgc cgaagaaggc gttgagggcg
     2761 acggtgcgca tcgcgcacac ttcccccgcc gggccggccc cccctcccgc tgcgacgggg
     2821 ggggcgccct ccgcgcggag cgtcacgagc tcagtcatgc ccgcccccgt gccgggcccg
     2881 cgtcacgaag cgcgcgacca cgctgatcac gagcacgagc gcgatgagca ccagcgcgcc
     2941 cgcccaggcc tgcgcgtgcc agtcgtcgta cgggctgatg gcataggtga agatctgcag
     3001 cggaagcgcc gcgatgggtt gggtgagctc cgtggaccag aactggttgc cgaacgcggt
     3061 gaagagcagg ggtgccgtct ccccggccac gcgc
//
LOCUS       DASSYW010000649         3323 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1450905, whole genome shotgun sequence.
ACCESSION   DASSYW010000649 DASSYW010000000
VERSION     DASSYW010000649.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3323)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3323)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3323
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1450905"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..234
                     /locus_tag="VFN38_10415"
     CDS             <1..234
                     /locus_tag="VFN38_10415"
                     /inference="COORDINATES: protein motif:HMM:NF013781.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016866 - intramolecular transferase
                     activity [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase family protein"
                     /protein_id="HET9012217.1"
                     /translation="KIGEQVDREQRQRLAKVRAERDNALCTARLEKLREAARGAENTF
                     PHILDCARAYCTLFEIRRALEDVFGAYREPVFF"
     gene            250..1053
                     /locus_tag="VFN38_10420"
     CDS             250..1053
                     /locus_tag="VFN38_10420"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HET9012218.1"
                     /translation="MPAPKAKARPKSTDWWASYFDAHYLLEYQPIFDLTRDRVEVARL
                     IELLALPSGARVLDVPCGQGRHAHLLAEAGFRVDGLDYSKHLIDLARERGTGPALRYT
                     RGDMRTLPARWTGHFDAVLNLFTSFGFFTDPSDDAVVIREFARVLAPGGVLVWHGGSR
                     DGVMARFLARDWWKANDGTMIGHERAFDPLSGILSIRTAWEGPSGSGTREHRIRLYTA
                     TRLAELCLDAGLVVEEAFDGFRDRPLTRRSGEMLLVARKRELPRRRRAR"
     gene            1065..1475
                     /locus_tag="VFN38_10425"
     CDS             1065..1475
                     /locus_tag="VFN38_10425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin B12-binding domain-containing protein"
                     /protein_id="HET9012219.1"
                     /translation="MRPIRVLVAKPGLDGHDRGAKVVAAALRDAGMEVIYTGLHQTPE
                     MIASAAIQEDVDVVGLSILSGAHMTLFPRVLALLKEQGRDDILITGGGIIPKEDMDAL
                     HAMGTGKLFGPGTPTSELIAYIREWFAEQSHQEA"
     gene            1483..3144
                     /locus_tag="VFN38_10430"
     CDS             1483..3144
                     /locus_tag="VFN38_10430"
                     /EC_number="6.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016874 - ligase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA carboxylase subunit beta"
                     /protein_id="HET9012220.1"
                     /translation="MTSRLRELSAEIRALEDRLRQGGGPDKADKQHRQGKLTARERVA
                     GLFDPGARFIELGLLVAYDQYDGQAPGAGVVTGLGLVHGRPVVVVANDATVKAGSWWP
                     ETIRKILRAQEVAMRCHVPIVYLVDSAGVNLPYQGGVFPGQYGASRIFYYNSIMRRYL
                     RIPQLAAVMGQCIAGGAYLPALSDLIVMVKGSSFMGLGGPNLVKGATGQTIDGETLGG
                     AETHTRVSGVAHYAVESDEECLEKLRELVEMLPRTSSFVAETAELHGPADARSTSGRG
                     SAARSGDDGHAHDLYDLLPGDHRMSYDMHHILRAVVDDGRLLEFQEHLAREMICGDAR
                     IDGIPVGIIANQRGLVKGRAGEKPRFGGIVYAESAEKVAFFIERCDREGIPLLFVQDV
                     SGFMVGPESEHEGVIRSGARFVEAMATARVPKLVLTVNHASGAGYYAMAGQGFDPDFI
                     FSWPTGRMGVMEGESAIQAVHGPAITRAAADKRPLDAETQRAVDEMRADYEHQLDARY
                     AAARGYVDAIVYPEETREVLAHALRAALSNPGPHLGPFVLPASAT"
     gene            3165..>3323
                     /locus_tag="VFN38_10435"
     CDS             3165..>3323
                     /locus_tag="VFN38_10435"
                     /inference="COORDINATES: protein motif:HMM:NF018938.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyclic terpene utilization AtuA family protein"
                     /protein_id="HET9012221.1"
                     /translation="MADRIVRVASGQGFWGDWLDAPRRQVEGGPVDYLMLDYLAEVTM
                     SILQKQKER"
BASE COUNT          497 a         1151 c         1203 g          472 t
ORIGIN      
        1 aagatcggcg agcaggtgga ccgcgagcag cggcagcgcc tggcgaaggt gcgcgccgag
       61 cgcgacaacg cgctctgcac cgcgcggctg gagaagctgc gcgaggcggc gcgcggcgcg
      121 gagaacacct tcccccacat cctcgactgc gcgcgggcgt actgcaccct gttcgagatc
      181 cggcgggcgc tggaggatgt gttcggggcg tatcgcgagc ccgtgttctt ctagccgcgc
      241 gataccgact tgcccgcacc gaaggcgaaa gccaggccga agagcaccga ctggtgggcg
      301 tcgtacttcg acgcccacta tctgctggag taccagccga tcttcgacct cacgcgcgac
      361 cgtgtggagg tggcgcggct gatcgagctc ctggcgctgc ccagcggcgc gcgcgtgctg
      421 gacgtgccct gcggccaggg gcggcacgcc cacctcctgg ccgaggcggg cttccgggtg
      481 gatggcctcg actactcgaa gcacctgatc gacctcgccc gggagcgcgg caccggaccg
      541 gcgctgcgat acacgcgcgg cgacatgcgc acgctgcccg cccggtggac ggggcacttc
      601 gacgcggtgc tcaacctgtt cacgagcttc gggttcttca ccgacccgtc cgacgacgcc
      661 gtggtgatcc gcgagttcgc ccgcgtcctt gcaccgggtg gggtgctcgt gtggcacggc
      721 gggagccgcg acggcgtgat ggcccggttc ctggcccgcg actggtggaa ggcgaacgac
      781 ggcacgatga tcggccacga gcgggcgttc gatcccctgt cgggcatcct cagcatccgc
      841 accgcctggg aggggccgtc gggcagtggc acgcgcgagc accgcatccg gctctacacc
      901 gccacgcgcc tcgccgagct ctgtctcgac gcggggctcg tcgtcgagga ggcgttcgac
      961 ggcttccgcg atcgccccct cacgcgccgc tccggcgaga tgctgctcgt ggcgcgcaag
     1021 cgcgagttgc cgcgccgccg gcgcgcccgc tagctttgac gcctatgcgc cccattcgtg
     1081 ttctggttgc caagcccggc ctcgacggcc acgaccgcgg ggcgaaggtc gtcgccgcgg
     1141 cgctccgcga cgcgggcatg gaggtcatct acaccgggtt gcaccagacc cccgagatga
     1201 tcgcctccgc cgccatccag gaggacgtcg acgtcgtcgg cctctccatc ctgagcggcg
     1261 cgcacatgac cctgttcccg cgcgtgctcg cgctgctcaa ggaacagggt cgcgacgaca
     1321 tcctcatcac cggcggcggc atcatcccga aggaggacat ggatgccctg cacgcgatgg
     1381 gaacgggcaa gctgttcggc cccggcacgc cgacctccga gctgatcgcg tacatcaggg
     1441 agtggttcgc cgagcagtcg catcaggaag cctgacgcag ccgtgacgag ccggctccgc
     1501 gagctgagcg ccgagatccg cgcgctggag gaccgcctcc ggcagggagg gggtcccgac
     1561 aaggccgata agcagcaccg ccagggcaag ctcacggcgc gcgagcgcgt cgccggcctg
     1621 ttcgacccgg gcgcccgctt catcgagctc gggttgctgg tggcgtacga ccagtacgac
     1681 ggccaggcgc ccggcgccgg cgtcgtcacc gggctggggc tcgtccacgg ccgcccggtg
     1741 gtggtggtcg cgaatgacgc cacggtgaag gccggctcgt ggtggccgga gacgatccgc
     1801 aagatcctgc gcgcccagga agtcgccatg cgctgtcacg tgccgatcgt gtatctggtc
     1861 gattcggcgg gggtgaacct gccgtatcag gggggcgtgt tcccgggaca gtacggggcg
     1921 agccgcatct tctattacaa ctccatcatg cgccgctacc tgcgcatccc gcagctggcg
     1981 gcggtgatgg ggcagtgcat cgcgggcggc gcgtacctcc cggcgctctc cgacctgatc
     2041 gtgatggtga agggctcgtc gttcatgggg ctcggcgggc cgaacctcgt gaagggcgcc
     2101 accggccaga cgatcgacgg ggagaccctc ggcggggcgg agacgcacac ccgggtgagc
     2161 ggcgtggcgc actacgcggt ggagagcgac gaggagtgcc tggagaagct gcgcgaactg
     2221 gtggagatgc tgccgaggac cagttcgttc gtggcggaga cggcggagct ccacgggccc
     2281 gcggacgcga ggagcacgag cggcagaggg tccgcggcgc gcagcggtga cgacgggcac
     2341 gcgcacgacc tctacgacct gctccccggc gaccaccgca tgtcgtacga catgcaccac
     2401 atcctgcgcg cggtcgtcga cgacgggcgg ctgctcgagt tccaggagca tctcgcccgg
     2461 gagatgatct gcggcgacgc gcgcatcgac ggcatcccgg tggggatcat cgccaaccag
     2521 cgcggcctcg tgaagggccg cgcgggggag aagccacgct tcggggggat cgtctacgcc
     2581 gagagcgccg agaaggtggc gttcttcatc gaacggtgcg accgcgaggg gatcccgctg
     2641 ctgttcgtgc aggacgtgtc gggcttcatg gtcggcccgg agtcggagca cgaaggcgtc
     2701 atccgctcgg gggcgcgctt cgtcgaggcg atggccacgg cgcgcgtgcc caagctggtg
     2761 ctcacggtga accacgcctc gggcgccggc tactacgcga tggcggggca ggggttcgat
     2821 cccgacttca tcttctcctg gcccaccggg cgcatggggg tgatggaggg cgagagcgcc
     2881 atccaggcgg tgcacggccc cgcgatcacc cgcgcggccg ccgacaagcg ccccctcgac
     2941 gccgagaccc agcgcgccgt ggacgagatg cgcgccgact acgagcacca gctcgacgcc
     3001 cgctacgccg ccgcgcgcgg ctacgtggac gccatcgtct atcccgagga gacgcgcgag
     3061 gtgctggcgc acgccctccg ggccgccctc tccaatcccg ggccgcatct cggcccattc
     3121 gttcttcccg cgagtgccac atgagccacc cgagtgccgg cccgatggca gacagaatcg
     3181 ttcgcgtcgc cagtggccag gggttctggg gcgactggct cgacgcgccc cgccgccagg
     3241 tcgagggcgg accggtggac tacctgatgc tcgactacct cgccgaggtc acgatgtcca
     3301 ttctgcagaa gcagaaggag cgc
//
LOCUS       DASSYW010000650         2610 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1347790, whole genome shotgun sequence.
ACCESSION   DASSYW010000650 DASSYW010000000
VERSION     DASSYW010000650.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2610)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2610)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2610
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1347790"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(56..466)
                     /locus_tag="VFN38_10440"
     CDS             complement(56..466)
                     /locus_tag="VFN38_10440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012222.1"
                     /translation="METNTTSTASDGSTAAGADLHDRIPDQGSGATESIRGKVGNMQA
                     GLADLLDSSAQVIRSRGNAASDAADGAAGDGAAERLAASGEATAAVLERGAMWLREND
                     LSDIEERVTAELREHPARTLLVAAGVGFLLSRRR"
     gene            complement(566..781)
                     /locus_tag="VFN38_10445"
     CDS             complement(566..781)
                     /locus_tag="VFN38_10445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012223.1"
                     /translation="MRLLVDPQGREWQVFERTAGAVSPAAGRASLIFDSDGIVRRLWR
                     YPSGWAALPDAELLRLMDRVQAEASTA"
     gene            complement(961..1173)
                     /locus_tag="VFN38_10450"
     CDS             complement(961..1173)
                     /locus_tag="VFN38_10450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012224.1"
                     /translation="MRTNNSRSSSSRAASGSVPVPADRRRRTRLRELCDEVIASFRMA
                     SQPDQFSEADRAEGKALVSAIAGRTR"
     gene            1403..>2610
                     /locus_tag="VFN38_10455"
     CDS             1403..>2610
                     /locus_tag="VFN38_10455"
                     /inference="COORDINATES: protein motif:HMM:NF040455.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HET9012225.1"
                     /translation="MTKPRARWCAAVLLPLALLAGCSRGDANGSEASAGDVEKAAWAP
                     ANLTEVQGVPVATLRSAIEQRLTGQRPATVGEEAWKHTQRLYKRFGQTPLWLTTDGLE
                     KERAGALTDAVLNANADALKLDEYPITELANALVELRRAPKPTAEQLTDVDVLLTATY
                     ASLGEDLLTGYVEPKSIAQSWHIDPEDENVDSALVRTLSRMPLDKAISAMRPNDPDYV
                     GLQKELVRFRGVVAKGDWPRIPAGKALKTGDTDSPQRLAALRGRLAAEGIAVAAPAAA
                     NVYDAGLAAGVAQFQARHAIGVDSSLGTETLNSLNVPAAYRLGQIAANMERHRWMPRS
                     LGARYISVNVPAFHLEAYDKGEKALEMKVIVGQEYEDKATPVFSDTMETVVFRPYWNI
                     TPDIQAKEIEP"
BASE COUNT          392 a          950 c          925 g          343 t
ORIGIN      
        1 gggaggtacc agggcgccgt ccccgcggcg cgctcgctcg ctgccgccga agcgctcagc
       61 ggcggcggct cagcaggaag ccgacacccg cggcgaccag caacgtccgc gcgggatgct
      121 ccctcagctc cgcggtgacg cgctcctcga tgtcgctgag atcgttctcg cgcagccaca
      181 tcgccccgcg ctccagcacc gcggccgtcg cctcgccgct cgcggcgagc cgctcggccg
      241 caccgtcacc tgccgcgccg tccgccgcgt cgctggcggc gttgccgcgc gaccggatca
      301 cctgcgcgct cgagtccagg aggtcggcga gccccgcctg catgttgccc accttgccgc
      361 gaatcgactc cgtcgcgccc gacccctggt ccgggatccg gtcgtggaga tcggcgccgg
      421 ccgccgtgga accgtcgctg gccgtcgatg tcgtgttggt ttccattctc cgccgctccg
      481 cctgggggtc gtggccgccg atggagcggc cggcgaggtg atgcgcaggg ctcgtgcccg
      541 cggacaggcg ccgcgcgcgg cgtggtcagg ccgtcgacgc ttccgcctgg acgcgatcca
      601 tcagccgaag cagctcggcg tccggaaggg cggcccagcc ggaagggtag cgccagagcc
      661 ggcgcacgat tccatcggag tcgaagatga ggctcgcgcg gccggcggcg ggagacaccg
      721 ctccagcggt ccgctcgaac acctgccact cgcgcccctg tgggtctacc aggagtctca
      781 tcactatcgg tggggaaagc tcacgcttcg agggctgcaa ctgcgggacc acgtgaggcg
      841 atcctcacga aacgctccgt cggtcaccgt acgcgggtcg cacgacgggc gtcgcgctcc
      901 gcgagcgcgc agggactggt ggcgccgatc gggcgccacc agcaccgcag catcgaatgt
      961 ctatcgcgtc cggccggcga tcgccgagac gagcgccttt ccctcggcac gatccgcctc
     1021 gctgaactga tccggctggc tcgccatccg gaacgaggcg atcacctcgt cgcacagctc
     1081 gcgcaggcgg gtacgccggc ggcggtcggc gggaacgggc acggagccgg aggcggcgcg
     1141 ggacgacgag gagcgggagt tgttcgtgcg catggggagt cgggagagtc ggtcgaacgg
     1201 tggctggccg gcgtccgtgc cggggccgct tgccacccct ctaaggcagg gtccgggcca
     1261 gcgcgccgga ccgggcgtcc ggcgaaatcc cgcgcggcgg gaacgatggc ccgtatctcg
     1321 ccctccaacc accgaccagc cggaccgcgt cgcgggccgg ttcccttgcc gacatgagac
     1381 gatgaccctg acgattccag tgatgacgaa gccgcgtgcc cgatggtgcg cggcggtgct
     1441 gctccccctc gcactgctcg cggggtgttc gcgcggcgac gcgaacggca gcgaggcctc
     1501 ggccggcgac gtcgagaagg ccgcgtgggc gccggccaac ctcacggagg tgcagggcgt
     1561 cccggtggcc accctccggt cggccatcga gcagcggctc accggccagc ggccggccac
     1621 cgtgggtgag gaggcgtgga aacacaccca gcggctgtac aagcggttcg gacagacgcc
     1681 gctctggctc accacggatg gtctggagaa ggagcgcgcc ggtgccctga ccgacgccgt
     1741 gctcaacgcc aacgccgacg ccctcaagct cgacgagtat cccatcaccg agctggcgaa
     1801 cgccctcgtg gagctgcgcc gcgccccgaa gccgacggcg gagcagctca ccgacgtcga
     1861 cgtcctgctc acggcgacgt atgcgtcgct cggcgaggac ctgctcaccg gctacgtgga
     1921 gcccaagtcc atcgcccaga gctggcacat cgatcccgag gacgagaacg tggacagcgc
     1981 cctcgtgcgc accctctcca ggatgccgct ggacaaggcg atcagcgcga tgcgtccgaa
     2041 cgatccggac tacgtggggc tccagaagga gctggtgcgc tttcgcggcg tcgtcgccaa
     2101 gggagactgg ccgcgcattc ccgccggcaa ggcgctgaag acgggtgaca ccgattcgcc
     2161 gcagcggctc gccgcccttc gcggccggct cgcggccgag ggcatcgccg tcgccgcgcc
     2221 cgcggcggcg aacgtctacg acgccgggct cgccgccggc gtggcgcagt tccaggcccg
     2281 gcacgccatc ggtgtcgaca gctcgctcgg caccgagacc ctcaactcgc tgaacgtgcc
     2341 cgcggcgtac cgcctcgggc agatcgccgc gaacatggag cgccaccgct ggatgccgcg
     2401 ctccctgggc gcgcgctaca tctccgtcaa cgtccccgcc ttccacctcg aggcgtacga
     2461 caagggggag aaggcgctgg agatgaaggt gatcgtgggc caggagtacg aggacaaggc
     2521 gacccccgtg ttcagcgaca cgatggagac ggtggtgttc cgcccctact ggaacatcac
     2581 gccggacatc caggccaagg agatcgagcc
//
LOCUS       DASSYW010000651         2344 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1570552, whole genome shotgun sequence.
ACCESSION   DASSYW010000651 DASSYW010000000
VERSION     DASSYW010000651.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2344)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2344)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2344
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1570552"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(261..527)
                     /locus_tag="VFN38_10460"
     CDS             complement(261..527)
                     /locus_tag="VFN38_10460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012226.1"
                     /translation="MHAVVVDVSISDVEEAQRELRERVVPAVSQAPGFVSGVWLRPGE
                     GKGHSVVVFETEEAANEMAERVPSMVPPVVTVENVSVCEVAANA"
     gene            complement(609..682)
                     /locus_tag="VFN38_10465"
     tRNA            complement(609..682)
                     /locus_tag="VFN38_10465"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(646..648),aa:Pro,seq:tgg)
     gene            complement(706..>2344)
                     /locus_tag="VFN38_10470"
     CDS             complement(706..>2344)
                     /locus_tag="VFN38_10470"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HET9012227.1"
                     /translation="LDGGTYTARAEQVDAAGNRGTSATVTFTVEAPDATAPKPVLQTP
                     PDGSATNDTTPAFAGRAGRRPGDGDSVRVLAWSGSDTAAAPVVDQTATAAADGSFSVD
                     APDPLPEGPYTARVEQDDAAGNHGASALTTFKIDTTGPSPTLTQPADGSETNDPKPAF
                     SGTAGTEPGDGDSVSVHVWSGGSTAGEPVFTLTAARGADGSFSATPATPLERGTYTAR
                     AEQADAAGNHGDSSATSFRFTGVPDPTIAAAGDIACGSTSLGGMCQQMATSDLVLAAN
                     PAAVLALGDTQYEAGAYDDYLSRFDPSWGRFKPKLYPAIGNHEYGSSVNGTCDVNVSG
                     DPRSYACGYFDYFDGKGNLDGRAGERGKGYYAFDVGRWRIYAMNSNCGRTGAPSCAAG
                     GAQEQWLRADLAAHPATCQLMFMHHPLFTSDTREFDTPAFRDQLRPLWSAFYDHGGDV
                     VLNGHSHFYERYLPQTPQGVPDAEHGIQQIISGTGGRNVYDVDTNGIEPNSVVHNGAS
                     FGVLSLTLHSTSYDWRFMPAAGSTFTDAGTRDCHGAP"
BASE COUNT          300 a          826 c          852 g          366 t
ORIGIN      
        1 gccgagtgcg agcgcctcgg cgtagacgtg cgccatccag aagacgccgg cggtgacggc
       61 cacggtcacg gcggtgaccc ccgcgttgtc gggctggtac tggcgcgaca cggcgatcac
      121 ggacgtcgcg aggatcaacc catagatcgc gcccgctacg tcgcggctgg ccgcctggcg
      181 caggccgggc ttccaccagc gcgcgggacg cgttcgcggc gacgtgtgcc gcggctgtcc
      241 aaccgggccc ggcggcgaac ctaggcgttt gcggcgactt cgcagacgct gacgttctcg
      301 accgtcacca cgggcggcac cattgaggga acccgctccg ccatctcgtt cgcggcttcc
      361 tcagtctcga agaccacaac cgaatggccc ttcccctcgc caggcctcag ccagacgcct
      421 gagacgaagc ccggcgcctg cgagaccgct gggacgacgc gctcgcgcag ctcgcgctgt
      481 gcctcctcaa cgtcgctgat cgatacgtcg acgacgaccg cgtgcatgct tgctcccttc
      541 tcgtgccgta gagcgatgct cgcagagatc ggagttcctc cgcaaggcct ttttcgaact
      601 gaacttcatc ggggcgcccg gatttgaacc ggggacctcc gccacccaaa ggcggcgcgc
      661 taccaggctg cgctacgccc cgcgcagacg cccagtatgg cggccctacg gcgcgccgtg
      721 gcagtcgcgc gtgccggcgt ccgtgaacgt ggagcccgcc gccggcatga agcgccagtc
      781 gtagctcgtg gagtggagcg tgaggctgag cacgccgaag ctcgcgccgt tgtgcaccac
      841 gctgttcggc tcgatcccgt tcgtgtcgac gtcgtagacg ttgcggccgc ccgtgccgct
      901 gatgatctgc tggatgccgt gctccgcgtc cgggacgccc tgcggcgtct gcggcaggta
      961 gcgctcgtag aagtgcgagt ggccgttgag gacgacgtcg ccgccatggt cgtagaacgc
     1021 gctccacaga ggccgaagct ggtcgcggaa cgccggggtg tcgaactcgc gggtgtccga
     1081 ggtgaacagc gggtgatgca tgaacatcag ctggcaggtg gcgggatgcg ccgcgaggtc
     1141 ggcccgtagc cactgctcct gggcgccgcc cgccgcacag ctcggcgccc ccgtgcggcc
     1201 gcagttcgag ttcatcgcgt agatccgcca gcggccgacg tcgaacgcgt agtagccctt
     1261 gcctcgctca ccggcgcggc cgtcgaggtt gcccttgccg tcgaagtagt cgaagtagcc
     1321 gcacgcgtac gagcgcggat cgccgctcac gttcacgtcg caggtgccgt tcaccgacga
     1381 gccgtactcg tggttgccga tcgccgggta gagcttcggc ttgaaccggc cccacgaggg
     1441 gtcgaaccgg ctcaggtagt cgtcgtaggc gccggcctcg tactgcgtgt cgcccagtgc
     1501 gagcacggcg gccggattcg ccgcgagcac caggtcggag gtggccatct gctggcacat
     1561 gccacccaag ctggtggacc cgcaggcgat gtcgccggcg gcggcgatgg tcgggtcggg
     1621 cacgccggtg aacctgaacg aggtggcgga gctgtccccg tggttgcccg cggcgtccgc
     1681 ctgctcggcg cgtgcggtgt aggtgccgcg ctcgagcggc gtggccggcg tcgccgagaa
     1741 ggagccgtcc gcgccgcgcg ctgcggtgag agtgaagacc ggctcgcccg ctgtcgatcc
     1801 gccgctccac acgtgcaccg acacggagtc gccgtcgccc ggctcggtgc cggccgtgcc
     1861 ggagaaggcg ggcttcgggt cgttcgtctc cgagccgtcg gcgggctgcg tgagcgtggg
     1921 gctcggcccg gtcgtgtcga tcttgaacgt cgtgagcgcg ctcgcgccgt gatttccggc
     1981 cgcgtcgtcc tgctcgacgc gcgccgtgta cgggccctcg ggcagcgggt cgggcgcgtc
     2041 gaccgagaac gagccgtcgg cggccgcggt ggccgtctgg tccaccaccg gcgcggccgc
     2101 ggtgtcgctg ccgctccacg ccagcacgcg caccgagtcg ccgtcgccgg gccgcctgcc
     2161 ggccctgccg gcgaacgcgg gcgtcgtgtc gttcgtggcc gacccgtccg gcggcgtctg
     2221 gagaaccggc ttcggggcgg tcgcgtccgg cgcctccacg gtgaacgtca ccgttgcgct
     2281 cgtgccgcgg ttgccggctg cgtcgacctg ctcggcgcgc gcggtgtagg tgccgccgtc
     2341 gagc
//
LOCUS       DASSYW010000652         2180 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1402085, whole genome shotgun sequence.
ACCESSION   DASSYW010000652 DASSYW010000000
VERSION     DASSYW010000652.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2180)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2180)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2180
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1402085"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1689
                     /locus_tag="VFN38_10475"
     CDS             <1..1689
                     /locus_tag="VFN38_10475"
                     /inference="COORDINATES: protein motif:HMM:NF012321.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HET9012228.1"
                     /translation="LRYALGSRGEVPVTISLTARDAERYGVPYSPTHRVEWREDRGRL
                     TVRSDCDPRGEFQLLLPVRRGLIGTTVVTHAPGGGDRFAMLVVSPPVVSNDMVIPRDL
                     TLVVDVSGSMSGGKMEQARAALNQALGSLRAADRFRVIAFSSSVTEFASGWTPVTAAS
                     VGRAREFVDNLEARGGTNIEGALNAALGARIDASRMGIVLFMTDGLPSVGEQAPEKIA
                     AAAAAHRQNFRIFPIGVGHDVNTYLLDRLAVEGKGRVEYVAPEANVETALGAVLGRID
                     APVLSDIRIVQSPVRLIDRAPAELPDLFSGEELVVFARYAGEASGEIILEGSRNGRRE
                     RFSAPVRFPEHETANAWVAPLWASQRIGELTRQARLEGGSQALISEIKALGLRYGIIT
                     EYTSYLVQEPQRPQLAGEGQLRLDEVVVTGTAAAAPAAQSGADAFRRAEKSAKLADAK
                     TIAAAEEAANLNVAKDERSLKNKRVGGRLFVERDAVWTDAGHTGTVQVVDVAPFSPAW
                     FALTRALPEIVPWLSAGESVLIAGKRVSIRVGPKGVEEWKPGQLEKVTRDFRGA"
     gene            1686..>2180
                     /locus_tag="VFN38_10480"
     CDS             1686..>2180
                     /locus_tag="VFN38_10480"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HET9012229.1"
                     /translation="MTEFLADLFTQYHASLVRVLYRRTGDRERAEEIAQEVFARAAVG
                     APIRNPRPWLFAVALNLVREEGRTTTRRGRLLELYKEERPQLAPAPDEELERSEKAER
                     VRAALDTLTARDKEALLLQAEGFSYDEIASALGLARGAIGTTLARARKRLVESYRARE
                     AEEAR"
BASE COUNT          341 a          714 c          804 g          321 t
ORIGIN      
        1 ctgcgctatg ccctgggctc gcgcggtgag gtgccggtga cgatctcgct caccgcccgt
       61 gacgccgagc gctacggtgt gccgtactcg ccgacgcatc gggtcgagtg gcgcgaagac
      121 cgcgggcgtc tcacggtgcg aagcgactgc gatccgcggg gtgaattcca gcttctcctt
      181 cccgtgcgtc gcggcctcat cggcaccacg gtggtgacgc acgcgccggg cggcggcgat
      241 cgcttcgcca tgctcgtggt gtcgccgccg gtcgtgagca acgacatggt gatcccgcgc
      301 gacctgactc tggtcgtgga cgtctccggt tccatgagcg gcggcaagat ggagcaggcg
      361 cgagcggcgc tcaatcaggc gctgggctcg cttcgcgcag ccgatcgctt tcgcgtcatc
      421 gcgttctcga gcagcgtcac cgaattcgcg agcggctgga caccggtgac cgcggcgagc
      481 gtgggccggg cccgcgaatt cgtcgacaac ctggaggcgc ggggcggcac caacatcgaa
      541 ggggcgctca acgccgcgct gggggcccga atcgatgcca gccggatggg catcgtgctc
      601 ttcatgaccg atggactgcc ctcggtcggt gagcaggcgc ccgagaagat cgccgctgcc
      661 gcggccgcgc accggcagaa cttccgcatc ttcccgatcg gcgtcggcca cgacgtcaat
      721 acctacctgc tcgaccgcct cgcggtggaa gggaagggac gggtcgagta tgtcgctccg
      781 gaggcgaatg tcgagaccgc gctgggcgcg gtgcttggtc gcatcgatgc gcccgtcctg
      841 agcgacattc gcatcgtgca gtcacccgtg cggctgatcg atcgcgcacc cgcggagctg
      901 cccgatctct tctccggcga ggagctcgtg gtgttcgccc ggtacgcggg cgaagcgtcg
      961 ggcgagatca tcctcgaggg aagtcgcaac ggccgccgcg agcggttctc cgcgccggtt
     1021 cggttccccg agcacgagac ggcgaacgcg tgggtcgcgc cgctctgggc gtcgcagcga
     1081 atcggcgagc tcacccggca ggcacggctc gaagggggat cgcaggcgct gatctccgag
     1141 atcaaggcgc tcggtctccg ctacggcatc atcaccgaat acacgtcgta cctggtgcag
     1201 gagccgcagc ggccgcagct cgcgggcgaa ggtcagcttc ggctggacga agtcgtcgtg
     1261 accggcaccg cggcggcggc cccggcggcg caatcaggtg cggatgcctt ccgccgcgcc
     1321 gaaaagagcg ccaagctcgc ggacgcgaag acgatcgcgg ccgcggaaga ggccgccaac
     1381 ctcaacgtgg ccaaggacga gcggtcgctc aagaacaagc gggtgggtgg caggctcttc
     1441 gtcgagcgcg acgcggtctg gacggatgcg gggcacaccg gtaccgtgca ggtcgtggac
     1501 gtcgccccct tcagccccgc ctggttcgcg ctcacgcgcg cgcttcccga gatcgtgccg
     1561 tggctttcgg ccggggaatc ggtgctcatc gccggcaagc gcgtgagcat ccgtgtcggt
     1621 ccgaagggcg tggaggagtg gaagcctggg cagctcgaga aggtcacccg cgacttccgg
     1681 ggcgcatgac cgagttcctg gccgacctgt tcacgcagta tcacgcgtcg ctcgtgcggg
     1741 tgctgtatcg ccgcacgggc gaccgtgagc gcgcggagga gatcgcgcag gaagtcttcg
     1801 cgcgcgcggc cgtcggagcg ccgatcagga acccgaggcc gtggctcttc gcggtggcgc
     1861 tcaacctggt gcgcgaggaa ggcaggacca cgacccgtcg cggcaggctg ctcgagctct
     1921 acaaggaaga gcggccccag ctggcgccgg cgccggacga ggaactggag cgatcggaga
     1981 aagccgagcg ggttcgggcc gcgctcgaca ccctcacggc gcgcgacaag gaggcgctcc
     2041 tgctccaggc cgagggattc agttacgatg aaatagcgtc cgcgctcggt ctggcgcggg
     2101 gcgcgattgg aacgacgctc gcacgggcga ggaaacggct ggtcgaatcg taccgcgcgc
     2161 gtgaggcgga ggaggcgaga
//
LOCUS       DASSYW010000653         2445 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1549428, whole genome shotgun sequence.
ACCESSION   DASSYW010000653 DASSYW010000000
VERSION     DASSYW010000653.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2445)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2445)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2445
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1549428"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..654)
                     /locus_tag="VFN38_10485"
     CDS             complement(<1..654)
                     /locus_tag="VFN38_10485"
                     /inference="COORDINATES: protein motif:HMM:NF019000.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003690 - double-stranded DNA binding
                     [Evidence IEA];
                     GO_process: GO:0042262 - DNA protection [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="host-nuclease inhibitor Gam family protein"
                     /protein_id="HET9012230.1"
                     /translation="MEKTTEQTTAPDHLATALREAQQSALATTTDAKAAAAAAAMNRA
                     NGADMTEKLQQAIDGGAAVTVTSTAPLLLQTGPDSLIAADEAEASDFDAAAGWALRTM
                     ALAREEGLRLQAARDAEVAAVQAAYAPLLNSEADTYLAAERRLRRIVDAARAAGHLTK
                     KQTRATARGTFGWKSVPERVKVTDEAALLAWAEKHRPDLIETKVPEPTSRVPQKAIAP
                     "
     gene            complement(745..1467)
                     /locus_tag="VFN38_10490"
     CDS             complement(745..1467)
                     /locus_tag="VFN38_10490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012231.1"
                     /translation="MDRPKISEEEREEIHTALLERKEKLDKLREKAEDAKVPGAAEAY
                     DKILALYIDTGEGAGLTRLFAYQPDMRDESRYGEERDANGGQDLFGGGAETGGAQALG
                     TIWPEGTPARRPAIGDMVTPIAGGETRIVRLHAYLGSKLYDPTPTAAESMLQTGDVFE
                     VGVDGIFDRALAVAGHPTIANRWLEVAIAPQGDPETDPASAGAKLLAAGNASEVTDAE
                     VLDDDAEEPGASSDAGEPAATE"
     gene            complement(1448..2029)
                     /locus_tag="VFN38_10495"
     CDS             complement(1448..2029)
                     /locus_tag="VFN38_10495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ASCH domain-containing protein"
                     /protein_id="HET9012232.1"
                     /translation="MKALSLWQPYASLAAARAKRVETRDWNTEHRGPLAIHATASVPE
                     PYRSAYETMVHREPFDRWRRALGYSSLAAFPHGAIVGLVHVTSVVRLGPLVTETIRRS
                     NGSDEIAFGNYDEGRYGWALDDDAILLPRPVPCRGERRIWTLPLDAERAIAEQLRHYP
                     SLARAHPRWESDLRLYERAATTPSTQDHGPPQD"
     gene            complement(2034..>2445)
                     /locus_tag="VFN38_10500"
     CDS             complement(2034..>2445)
                     /locus_tag="VFN38_10500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012233.1"
                     /translation="AARAAARRPSSPEDRRALRRAGVPYDSWPVDHLEAALLDHLEAI
                     DRGEERVILTRSDETEAHYRTSKGWHLTVFVDCGGWDYIDRFTPPGSSRVYDVGANGL
                     FTAVLHWRPMHNERYRVWDWPRVAAAAGYGSGDV"
BASE COUNT          250 a          799 c          972 g          424 t
ORIGIN      
        1 cggggcgatc gctttctggg ggacccggct cgtcggctcg gggaccttcg tttcgatgag
       61 gtcgggccgg tgcttctcgg cccatgcgag gagcgcggcc tcgtcggtga ccttcacccg
      121 ctccgggacg ctcttccatc cgaaggtgcc gcgcgccgtc gccctcgtct gtttcttcgt
      181 gaggtggccg gcggcgcgcg cggcgtcgac gatgcgccga aggcggcgct cggcggcgag
      241 gtaggtgtcg gcctcgctgt tgaggagcgg ggcgtaggcg gcttgaaccg cggcgacctc
      301 ggcgtcgcgc gccgcctgga ggcggagccc ctcttccctg gcgagcgcca tcgtgcgcag
      361 cgcccagccg gccgcggcgt cgaagtcgct ggcctcggcc tcgtcggcgg caatgaggct
      421 gtccgggccg gtctgcagaa ggagcggcgc ggtgctcgtg acggtgacgg cggcgccgcc
      481 gtcgatcgcc tgttggagct tctcggtcat gtcggcgccg ttggcgcggt tcatcgccgc
      541 cgcggccgcg gccgccttgg cgtcggtggt cgtggcgagg gcgctctgtt gcgcctcgcg
      601 cagcgcggtg gcgaggtggt caggggcggt cgtctgctcg gtggtctttt ccatggggtc
      661 tcgggtcggg cgtggtaagt ggagggctcg ccggcggata aatgttacca gagcggcaac
      721 gtctatccgc cggcgcccgg gtggttactc ggtggcggcg ggctcgccgg cgtcgctgct
      781 tgcgcccggc tcctcggcgt cgtcgtcgag gacctcggcg tcggtcacct cgctggcgtt
      841 gccggcggcg aggagcttcg cgccggcgct ggccgggtcg gtctcggggt cgccctgggg
      901 ggcgatggcg acttcgagcc agcggttcgc gatcgtcggg tggccggcga cggcgagggc
      961 gcggtcgaag atgccgtcga cgccgacctc gaaaacgtcg ccggtctgca acatgctctc
     1021 ggccgccgtc ggcgtggggt cgtagagctt cgagccgagg taggcgtgga gccgaacgat
     1081 ccgggtctcg ccgccggcga tgggggtgac catgtcgccg atggccggcc gccgcgccgg
     1141 ggttccttcc ggccagatcg tgccgagcgc ctgggcgccg ccggtctcgg cgccgccgcc
     1201 gaagaggtct tggccgccgt tcgcgtcgcg ctcctcgccg tagcggctct cgtcgcgcat
     1261 gtcgggctgg taggcgaaga ggcgcgtgag gccggcgccc tcgccggtgt cgatgtagag
     1321 ggcgaggatc ttgtcgtatg cctcggcggc gccgggcacc ttcgcgtcct cggccttttc
     1381 gcgcagcttg tcgagctttt ccttccgttc gagcagcgcg gtgtggatct cttcgcgctc
     1441 ctcttcgcta atcttggggc ggtccatggt cctgggtgct gggggtcgtg gcggctcgct
     1501 cgtagagccg aaggtcgctc tcccagcgcg gatgtgcgcg ggcgaggctg gggtagtgcc
     1561 gaagctgctc ggcgatggcc cgctcggcgt cgagcgggag ggtccagatg cggcgctctc
     1621 cgcggcaggg caccggccgc gggaggagga tggcgtcgtc gtcgagcgcc cacccgtagc
     1681 ggccctcgtc atagttgccg aaggcgatct cgtcgctgcc gttgctccgg cggatagtct
     1741 cggtgacgag cggccctaag cgaacgacgc tcgtcacgtg tacgagcccg acgatcgcgc
     1801 cgtgcgggaa ggcggcgagg ctgctgtagc cgagcgcgcg gcgccagcgg tcgaagggct
     1861 cgcggtgcac cattgtttcg taggcgctcc ggtacggctc gggcacgctc gccgtcgcgt
     1921 ggatggcgag cggcccgcgg tgctcggtgt tccagtcccg ggtctcgacg cgcttcgccc
     1981 tggcggcggc gaggctggcg tatggctgcc aaagcgagag ggctttcatc ggcctatacg
     2041 tcgccggacc cgtagccggc ggccgccgcg acccgcggcc aatcccagac ccggtagcgt
     2101 tcgttgtgca tcggccgcca gtgcaggacg gcggtgaaga ggccgttggc gccgacgtcg
     2161 tagacgcgcg agctcccggg cggggtaaag cgatcgatgt agtcccagcc gccgcagtcg
     2221 acgaagacgg tcaggtgcca tcccttgctc gtgcggtagt gcgcctcggt ctcgtcgctc
     2281 cgggtgagga tgacgcgctc ctcgccgcgg tcgatcgctt cgaggtggtc gaggagggcg
     2341 gcttcgaggt ggtcgacggg ccagctgtcg taggggacgc cggcgcgccg aagcgcgcgc
     2401 cggtcctcgg ggctgctcgg gcggcgcgcg gccgccctcg cagcg
//
LOCUS       DASSYW010000654         2202 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1720062, whole genome shotgun sequence.
ACCESSION   DASSYW010000654 DASSYW010000000
VERSION     DASSYW010000654.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2202)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2202)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2202
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1720062"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            297..>2202
                     /locus_tag="VFN38_10505"
     CDS             297..>2202
                     /locus_tag="VFN38_10505"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HET9012234.1"
                     /translation="MKGVAPGTVTFRALPGMAQTYIAVVVAAGAMSLVRAAVDLRFDH
                     PWLFALLMALALGTSAAKIELPLGRGQSNLSLAHAINFWALLALGPAEATCIATLSAW
                     GQCTLRVGVRNPPHRVLFSIASLTLAVWSVGQPVALLLTRGGGDIASLFRAAAIIAPL
                     YFFTNTGMIAGAIALSSRQRVAHIWRRNFLWSAPSYLVGAALAAVATAASSRGWFGWL
                     ALLAVPLYLVFRSYHTVVARLREEQDETRRAMDVQHATIEALALAIETRAGCTPEHVR
                     SIQHYAGMLAEAAGLSDADVQAVRMAALLHDIGNMAVPEHILSKPEALTPEEFERAKI
                     HPRVGAEILRGVPFGVPVSELVLCHHERWDGHGYPAGRRGTDIPIGARVLAIADCYST
                     LQATRPYRPARTHAEALAVLRESSGTAFDPALVDLFVERVNATATAAVPIAAADGDWA
                     GAQDDGALQDIAGAHREEQTLYEIAQALGSRLGVSDTMALIQEKVNRLVPFVTCALFL
                     GNEENGYACRYAHGPGTEALFKWEPKSWSEIALKLPPCADGREAHAGELTSVLPCPLR
                     FEGRLIGGFVIYGTAHRTYTDEHRRILGLVSEQAAVAIFNSTRFEQTQHESHTDPLTG
                     LANRRSLDRQV"
BASE COUNT          323 a          765 c          747 g          367 t
ORIGIN      
        1 aggtggcaga tccctgtttt gcggcggact gctttgaaat ggaacagtgt gcgcccgcgg
       61 cgggcgcaca ccggcccctc tgcgccgcta ctgcgtgacc gttactcgct ggccaggcgc
      121 aacttaggcg atgttcccgg tgccggccga gcgcccgcac acagcacgga aaccgggcac
      181 ccgccttgcg tcggccgtgg caccgtgtcc tatctgtacg ttcgtgtctt gtccagtccg
      241 ctccctgcgc aggggatcct gccgttgcgt gcagtggcgc gggcgaaggc gacatcatga
      301 aaggcgtcgc cccaggcacg gtcaccttcc gcgcgctgcc cggcatggca cagacgtaca
      361 tcgcggttgt cgttgccgcc ggcgccatgt ctctcgtgcg tgccgccgtc gatctgcgat
      421 tcgatcatcc gtggctgttc gcgctgctga tggcgctggc gctcggcacg tcggccgcga
      481 agattgagct gccgctcggc cgggggcagt cgaacctctc cctcgcgcac gcgatcaact
      541 tctgggcgtt gcttgcgcta ggccctgcgg aagccacgtg catcgcgacc ctcagcgcgt
      601 ggggccagtg cacgctgcgg gtcggagtgc gcaacccgcc tcaccgtgtt ctcttcagca
      661 tcgcctcgct gacgctcgcg gtctggtcgg tcggacagcc ggtggcgttg cttctgaccc
      721 ggggcggcgg cgacatcgcg tcactcttcc gcgccgcggc gatcatcgcg ccgctgtact
      781 tcttcacgaa cacaggaatg atcgccggcg cgattgcgtt gtcgtcgcgc cagcgcgtcg
      841 cgcacatctg gcgccgcaac tttctgtgga gcgcgcccag ctaccttgtc ggggctgcgc
      901 tcgccgccgt cgccaccgcc gcctcgtcgc gcggatggtt cggctggctg gcgctcctcg
      961 ccgtgccgct gtacctcgtc ttccgcagct atcacacggt ggtcgcgcgg ctgcgggaag
     1021 agcaggacga aacacgccgc gccatggacg tgcagcacgc caccatcgaa gcgctcgcgc
     1081 tcgcgatcga aacccgggcg ggctgcactc ccgagcacgt acgctccatt cagcactatg
     1141 cggggatgct cgcggaagcg gcgggactct ccgacgccga cgtgcaggcg gtgcgcatgg
     1201 cggcgttgct gcacgacatc ggcaacatgg cggtgccgga acacatcctg tcaaagccgg
     1261 aggcgttgac gccggaggag ttcgagcgcg cgaagatcca cccgcgtgtc ggcgccgaaa
     1321 ttctccgggg cgtgccgttc ggcgtcccgg tgagcgagct cgtgctgtgc caccacgagc
     1381 gctgggacgg tcatggctac cccgccggcc ggcgcggcac ggacatcccg atcggcgcgc
     1441 gcgttctggc gatcgcggac tgttacagca cgctccaggc gactcgcccc tatcggccgg
     1501 cgcgcacgca cgcggaggcg ctcgccgtcc ttcgcgagag ctcgggtacc gcgttcgatc
     1561 cggcgctcgt ggacctgttc gtcgagcgcg tgaacgccac ggcaaccgcg gcggtgccga
     1621 tcgcggcagc cgacggggac tgggcgggtg cgcaggacga cggagcgctc caggacattg
     1681 cgggggcgca tcgggaagag cagacgctct acgaaatcgc gcaggcgctc ggatccaggc
     1741 tcggagtctc cgacaccatg gcgctcatcc aggagaaggt caaccgcctg gtgccgttcg
     1801 tcacctgcgc gttgtttctc gggaacgagg agaacggata cgcgtgccgg tacgcccacg
     1861 gccccggcac ggaagcgctc ttcaaatggg aaccgaaatc atggagcgaa atcgcgctga
     1921 agctgccgcc atgcgccgac gggcgtgagg cgcacgccgg ggagctcacg tccgtcctcc
     1981 cctgtccact tcgcttcgag ggtcggctga tcggcgggtt cgtgatttac ggcaccgcgc
     2041 accgcaccta cacggatgaa caccgccgca ttctcgggct cgtcagcgag caggcggcgg
     2101 ttgcgatctt caactccacg cggttcgagc agactcagca cgagtcgcac accgatccgc
     2161 tcacggggct cgcgaaccgg cgatcgctcg accggcaggt cg
//
LOCUS       DASSYW010000655         3195 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1702767, whole genome shotgun sequence.
ACCESSION   DASSYW010000655 DASSYW010000000
VERSION     DASSYW010000655.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3195)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3195)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3195
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1702767"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(308..1921)
                     /gene="pckA"
                     /locus_tag="VFN38_10510"
     CDS             complement(308..1921)
                     /gene="pckA"
                     /locus_tag="VFN38_10510"
                     /EC_number="4.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004612 - phosphoenolpyruvate
                     carboxykinase (ATP) activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (ATP)"
                     /protein_id="HET9012235.1"
                     /translation="MATQTKPQDDTGLRGHLDGQGLAPTGEVHWNLVAPMLIQHAIRR
                     GEGQLADMGPFVSVTAPHTGRSPNDKFVVREPSTEADVDWGKVNQPISQAHFDALRAD
                     VQQYLDGQRELFVQDLYCGADPQYRLAVRYVSPNAWHMAFVRNMFIRPDASELPTFSP
                     NFTVLHAPEFQADPARHGTRTGTFIVLDLAQRTILIGGTRYAGELKKSMFTVMNYYMP
                     RQGVLSMHCSANVGPAGDTALFFGLSGTGKTTLCADPQRSLVGDDEHGWAPEGVFNYE
                     GGCYAKVINLSAEGEPDIYRTTQMFGTILENVVLDPLKRTVKFEDQSITENTRASYPL
                     HYIPNHVANGRGGHPKNIVFLTADAFGVLPPIARLSREQAMYYFLSGYTAKVAGTERG
                     VTEPQATFSSCFGGVFLVWHPTRYAELLGDLIDEHRSSVWLVNTGWSGGPYGVGKRMK
                     LGYTRAMVHAALGGALDATKTRTDPVFGLAVPQSVPNVPTEILDPRGTWTDTAAYDAQ
                     AKKLAEMFRKNFEKFGSVATKIRDAGPQG"
     gene            complement(1971..>3195)
                     /locus_tag="VFN38_10515"
     CDS             complement(1971..>3195)
                     /locus_tag="VFN38_10515"
                     /inference="COORDINATES: protein motif:HMM:NF007233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="phosphate acyltransferase"
                     /protein_id="HET9012236.1"
                     /translation="GLRNVHFGADYLIPFPFDPRVLLWVAPAVAWAAVASGVAREFID
                     LEGYRDLLELRLGRARGIMRGIINRAQRAPKRIVFPEGEEPKIMRAASIMVDDGIAMP
                     ILLGNRARIEELAAENRIPLTDIAIEDPATSERREDYAHYMWQLRQRKGLSLDEARRQ
                     LFNGNYFGSCMVARGDADALLSGVTMHYPETIRPALQVIGSHPSAKLVSGMYMMVTER
                     HVVFCADTTVNINPTAEQVAQIAYAASRITRTMGIVPRIAMLSFSNFGSVKHPDAEKM
                     AKATQLLKERDPTLVVDGEMQADTAMDAVILRRDYPFSTLKEQANVLIFPNLSAGNIA
                     YKLLHHLGGATAIGPILVGMRRPVHVLERGADVQDIVNMAAVAVVDAQERSQTTEPAF
                     AASAGGGTPTVFSKL"
BASE COUNT          484 a         1047 c         1143 g          521 t
ORIGIN      
        1 gcacgtaccg cagccgctgg aatgccgcgg tgtccaccag ccgcagcgcg acgggatcga
       61 cgcggatgtt gttccagagg ggatcgcgga tgatctcgaa gggcatgggg aaaggtgacg
      121 ggagaacggg aggacgggaa gacggcaaga cgcaagacgg gaagacggga agacgggagg
      181 acggaaggac ggaaggacgg gaacgacgaa gggcacaccg acatcagccc ggtgtgccct
      241 ttccgtcatt ccgtcattcc gtcatcccgt cattccgtca ttccgtcatc ccgtcatccg
      301 ccacgcgtca gccctgcggc cccgcatccc ggatcttcgt cgccacgctg ccgaacttct
      361 cgaagttctt gcggaacatc tcggccagct tcttcgcctg cgcatcgtac gccgcggtat
      421 cggtccacgt gccgcgcggg tcgaggatct ccgtcggcac gttcggcacg gattgcggca
      481 cggcgaggcc gaacaccgga tcggtgcgcg tcttggtcgc gtccagcgcg ccgccgagcg
      541 cggcgtgcac catggcgcgc gtgtagccga gcttcatgcg cttgccgacg ccgtacggcc
      601 caccgctcca cccggtgttc accagccaca cgctggaccg gtgctcgtcg atcaggtcgc
      661 cgagcagctc ggcgtacctc gtggggtgcc agacgagaaa cacccccccg aagcacgagg
      721 agaaggtggc ctgcggctcc gtgacgccgc gctcggtgcc cgcgaccttg gccgtgtagc
      781 cggacaggaa gtagtacatg gcctgctcgc gcgacagccg cgcgatgggc ggcagcacgc
      841 cgaacgcgtc ggcggtgagg aagacgatgt tcttcggatg gccgccgcgc ccgttggcga
      901 cgtggttcgg gatgtaatgc agcggatacg aggcgcgcgt gttctcggtg atgctctggt
      961 cctcgaactt caccgtgcgc ttgaggggat cgagcacgac gttctcgagg atggtgccga
     1021 acatctgcgt cgtgcggtag atgtcgggct cgccctccgc cgacaggttg atgaccttgg
     1081 cgtagcagcc gccctcgtag ttgaacacgc cctcgggggc ccagccgtgc tcgtcgtcgc
     1141 cgacgagcga acgctgcgga tcggcgcaca gcgtcgtctt gccggtgccg gagaggccga
     1201 agaagagcgc cgtgtcgccc gccggtccga cgttcgccga gcagtgcatg gacagcacgc
     1261 cctgcctggg catgtagtag ttcatcacgg tgaacatcga cttcttgagc tcacccgcat
     1321 agcgcgtccc gccgatgagg atggtgcgct gcgcgaggtc gaggacgatg aacgtgcccg
     1381 tgcgcgtccc gtggcgcgcc ggatccgcct ggaactccgg cgcatgcagc accgtgaagt
     1441 tgggcgagaa ggtgggcagc tcgctcgcgt cgggacggat gaacatgttc cgcacgaacg
     1501 ccatgtgcca cgcgttcggc gacacgtagc gcacggcgag ccggtactgc gggtcggcgc
     1561 cgcagtagag atcctgcacg aacagctcgc gctggccgtc caggtactgc tggacgtcgg
     1621 cgcggagcgc gtcgaagtgc gcctggctga tcggctggtt caccttgccc cagtcgacgt
     1681 cggcctcggt ggagggctcg cggacgacga acttgtcgtt cggcgagcgg cccgtgtggg
     1741 gggccgtcac ggagacgaac ggccccatgt cggcgagctg gccctcgccg cgccggatgg
     1801 cgtgctggat gagcatcggc gccacgaggt tccaatgcac ctcgccggtc ggggcgagcc
     1861 cctggccgtc gaggtggcct cggagtcccg tgtcgtcctg cggcttggtc tgtgtggcca
     1921 tcgctgtctg ccctctggaa gtgcgtcggc cgcgccgggc gcggccgtgc ttagagtttc
     1981 gagaaaaccg tcggagttcc gccgccggcc gaggcggcga aggcgggctc cgtcgtctgg
     2041 ctccgctcct gcgcgtcgac gacggccacg gcggccatgt tgacgatgtc ctgcacgtcg
     2101 gcgccgcgct cgagcacgtg cacggggcgc cgcatcccga cgaggatggg gccgatggcc
     2161 gtggccccgc ccaggtggtg cagcaacttg tacgcgatgt tgcccgcgct caagttcggg
     2221 aagatcagca cgttcgcctg ctccttgagc gtgctgaagg ggtagtcgcg ccgcaggatc
     2281 accgcatcca tcgcggtgtc cgcctgcatc tcgccgtcca cgaccagcgt cggatcgcgc
     2341 tccttcagca gctgcgtcgc cttcgccatc ttctcggcgt cgggatgctt gaccgagccg
     2401 aagttggaga aggagagcat ggcgatgcgc gggacgatgc ccatcgtgcg cgtgatgcgg
     2461 ctcgcggcgt acgcaatctg cgcgacctgc tcggccgtcg ggttgatgtt gaccgtcgtg
     2521 tcggcgcaga agacgacgtg gcgctcggtc accatcatgt acatcccgct caccagcttg
     2581 gcgctggggt gcgagccgat cacctggagg gcggggcgga tcgtctcggg gtagtgcatc
     2641 gtcacgccgg agagcagcgc gtcggcgtcg ccgcgcgcca ccatgcacga gccgaagtag
     2701 ttgccgttga acagctgccg ccgggcctcg tcgagcgaga gccccttccg ctggcgaagc
     2761 tgccacatgt agtgcgcgta gtcctcgcgc cgctccgagg tggcgggatc ctcgatcgcg
     2821 atgtcggtga gcgggatgcg gttctccgcc gcgagctcct cgatgcgggc gcggttgccg
     2881 agcaggatcg gcatcgcgat gccgtcgtcc accatgatgg acgcggcgcg catgatcttc
     2941 ggctcctccc cctcggggaa gacgatgcgc ttgggcgcgc gctgggcgcg gttgatgatg
     3001 ccgcgcatga tgccgcgcgc gcggccgagc cggagctcga ggaggtcgcg gtagccctcg
     3061 agatcgatga actcgcgcgc gacgccgctc gccaccgccg cccacgccac cgccggcgcg
     3121 acccacagca gcacgcgcgg gtcgaagggg aacgggatga ggtagtcggc gccgaagtgc
     3181 acgttccgca gcccg
//
LOCUS       DASSYW010000656         2035 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1289349, whole genome shotgun sequence.
ACCESSION   DASSYW010000656 DASSYW010000000
VERSION     DASSYW010000656.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2035)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2035)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2035
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1289349"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..451
                     /locus_tag="VFN38_10520"
     CDS             <1..451
                     /locus_tag="VFN38_10520"
                     /inference="COORDINATES: protein motif:HMM:NF028180.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012237.1"
                     /translation="DDLATGRFAPVIDDQSATDRRDEVQRVVFCTGKLYYDLVAKERP
                     SNVAIARVEELYPWPAEQISRIVDLYRNVVEVVWAQEEPKNMGAWSYVAPRLRACTGN
                     AMLIRYIGRPERASPAEGYVTSHQEEQARIVADVLEVPAKRKAAVRS"
     gene            586..>2035
                     /locus_tag="VFN38_10525"
     CDS             586..>2035
                     /locus_tag="VFN38_10525"
                     /EC_number="3.5.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019213 - deacetylase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PIG-L family deacetylase"
                     /protein_id="HET9012238.1"
                     /translation="MRVLVIAAHPDDEDTQLITWLTRGRHVETAYLALTRGDGGQNLL
                     GNELGEALGVIRTEELLAARRLDGGRQYFTRAYDFGFSKSADETFRHWPRDSILRDVV
                     TVVRSFKPHVIVAMFSGTPRDGHGHHQASGILAREAYDVAGDTVRFPRSATEGQGAWA
                     PLKFYRGAWAAAPTDPVLRINVGEFDPMAGRSYAEIAAESRSQHKSQAFGSLQPKGAR
                     FTQVRREATRVNESQVPGTERSMFDGIDTTWARFKTAGGSPAVAALIDSLVGAVAAAK
                     SAPYLRTPSTAVPALLRAMDLLRPYGSRPNDPELAPDGGVPRVPVSADLAEALRVEHG
                     RVSRALAIATGVAVEAQVERPAVAEGDSVGMTVTVYNRGTSPMEVHPESLAGCGGRGA
                     AEAPAGAVPNAVLLPDSSRVWRGYVCAATGSAQSPYWLVGGRSGDVFRRASLTRSEAE
                     ATAGQTFWVSFQAPGDPTNRKRFDISVPIVYRS"
BASE COUNT          308 a          673 c          735 g          319 t
ORIGIN      
        1 cgacgatctc gcgaccggtc gcttcgcgcc ggtgatcgat gatcagagcg ccaccgatcg
       61 ccgcgatgag gtgcagcgcg tcgtgttctg cacgggcaag ctgtattacg atctcgtcgc
      121 caaggaacga ccgtcgaacg tcgcgatcgc gcgtgtcgag gaactctacc cgtggccggc
      181 cgagcagatc tcgcgcatcg tcgatctcta tcgcaacgtg gtggaagtcg tctgggcgca
      241 ggaagagccg aagaacatgg gggcgtggag ctacgtcgcg ccgcgacttc gtgcgtgcac
      301 cggcaacgcg atgctgattc gctacatcgg gcggccggag cgggcgagcc cggccgaggg
      361 ctacgtcacg tcgcaccagg aagagcaggc gcgcatcgtg gccgacgtcc tcgaggtgcc
      421 ggcgaagcgc aaggcggcgg tgcggtcgta atgggcacgg tcatgattcg acgtacgctg
      481 cgcggggtcg ctgtcgcact gacagcgacc ctcgcgcttt caatccctgc cggtgcgcag
      541 ggcgtcccgg cgctcgacga cgccgtctcc ggcctcggcg agccgatgcg cgtgctcgtg
      601 atcgcggcgc acccggatga cgaggacacc cagctcatca catggctcac tcgtgggcgt
      661 cacgtggaga ccgcctacct cgcgctcacc cgaggcgacg gcggccagaa cctgctcggc
      721 aacgagctgg gcgaggcgtt aggcgtgatc cggacggagg agctgctcgc ggcgcgtcgt
      781 ctcgatggtg gccgccagta cttcacgcgc gcctacgact tcggcttctc gaagtctgcc
      841 gatgagacgt tccggcactg gccgcgagac tcgattctgc gcgacgtcgt gacggtcgtc
      901 cggtcgttca agccgcacgt gatcgtcgcg atgttctcgg ggacgccgcg cgacggccac
      961 gggcatcacc aggcgtcggg cattctcgcg cgcgaggcct atgacgtcgc cggtgacacc
     1021 gttcgcttcc cacgctcggc gactgaaggg cagggcgcgt gggcgccact caaattctat
     1081 cgtggagcct gggctgccgc tccgacggat ccggtcctgc gcatcaacgt cggcgagttc
     1141 gatccgatgg cggggcgttc ctacgcggag attgccgccg agagccgctc gcagcacaag
     1201 tctcaggcgt tcggctcgct gcagccgaaa ggcgcgcgct tcacgcaggt ccgccgcgag
     1261 gcgacccgcg tgaacgagtc gcaggtgccg ggcacggagc ggtcgatgtt cgatggtatt
     1321 gacacgacat gggcgcgatt caagacggca ggcggctcgc ccgcggtggc cgcgctgatc
     1381 gactcgcttg tcggcgccgt tgccgcggcg aagtccgcgc catatctgcg gacgccgagc
     1441 actgccgtgc cggcgctgct gcgcgcgatg gatctgctgc gtccgtacgg ctcgaggcct
     1501 aacgatcccg agctcgcgcc cgacggcggg gtaccccgag tcccggtgag tgcagacctc
     1561 gccgaggcgc tccgggtcga gcacgggcgt gtgagccgag cgcttgcgat cgcgacagga
     1621 gtcgccgtcg aggcgcaggt ggaacgaccg gcggtcgccg aaggcgacag cgtgggcatg
     1681 acggtgaccg tctacaatcg cggcacgtcg ccgatggagg tgcatcccga gtcgctcgcc
     1741 ggatgcggcg ggcgtggtgc ggcagaggcg ccggcgggcg cggtgccgaa cgcggtgctg
     1801 cttcccgaca gctcgcgcgt gtggcgcggc tacgtgtgtg ccgcaaccgg atcggcgcaa
     1861 tcgccgtact ggctcgtcgg cggtcgcagc ggcgacgtgt tccgccgcgc gagcctaacg
     1921 cggtccgaag ccgaggcgac agcggggcag acgttctggg tgtcgttcca ggcacccggc
     1981 gacccgacca accgcaaacg attcgacatc tcggtgccga tcgtctaccg ctccg
//
LOCUS       DASSYW010000657         2445 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_367587, whole genome shotgun sequence.
ACCESSION   DASSYW010000657 DASSYW010000000
VERSION     DASSYW010000657.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2445)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2445)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2445
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_367587"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..417
                     /locus_tag="VFN38_10530"
     CDS             <1..417
                     /locus_tag="VFN38_10530"
                     /inference="COORDINATES: protein motif:HMM:NF012339.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HET9012239.1"
                     /translation="PDRFMADMRSALADAGIEPEHIHTELFGALPPVNPGIVATSTTP
                     PHPPAGAAGTGPPVSFSRSGLTVNWSSEYASILELAEACDVPTRFSCRSGVCHTCVTQ
                     LIAGTTAYLQPPLEQPADGSVLICVAEPCEGVVLDL"
     gene            480..845
                     /gene="trxA"
                     /locus_tag="VFN38_10535"
     CDS             480..845
                     /gene="trxA"
                     /locus_tag="VFN38_10535"
                     /inference="COORDINATES: protein motif:HMM:NF012314.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HET9012240.1"
                     /translation="MTTRDITAAEFNDTINDNEIVLVDFWASWCGPCRAFAPTFAASA
                     DKHPDVVHAKVDTEAEQQLATAADIRSIPTLMAFKKGKLVFNQAGALPPAALEDLVEQ
                     VKAFDVDAAIAAQSNGEEG"
     gene            871..1692
                     /locus_tag="VFN38_10540"
     CDS             871..1692
                     /locus_tag="VFN38_10540"
                     /EC_number="4.2.1.17"
                     /inference="COORDINATES: protein motif:HMM:NF004519.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HET9012241.1"
                     /translation="MTEQTNFVLVDRPRPHVALVTLNRPERMNSMAFDVMVPLKGVLE
                     ELSYDNSVRAVVLTGAGRGFSSGADHKSAGSVPNIGGLTRPTFALRSMEVLDDVILAL
                     RKMHQPVIAAVNGAAIGGGLCLALAADIRVAGDGAYFRAAGINNGLTASELGLSYLLP
                     RAIGTSRAFELMLTGRDVDAEEAERIGLVSRAVPGDQLLETCYEMAERIAAFSRPGIE
                     LTKRTLWTGLDAASLEGHMQAEGLGQLFVRLLTANFEEAVAARAEKRPAAFTDDK"
     gene            1713..>2445
                     /locus_tag="VFN38_10545"
     CDS             1713..>2445
                     /locus_tag="VFN38_10545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003407507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HET9012242.1"
                     /translation="MITATDLEVRAGARTLLSTDGTSLRVQPGDRIGLVGRNGAGKTT
                     TMRILAGEGEPYAGDIARTGEIGYLPQDPREGNLEMLARDRVLSARGLDTLLSDLEKQ
                     QALMAEVADDATRDRAVRRYGQLEERFAALGGYGAESEASRICASLGLPERVLTQPLR
                     TLSGGQRRRVELSRILFAASDTGAGSSTTLLLDEPTNHLDADSLGWLRDFLRSHTGGL
                     VVISHNVDLLADVVNRVWFLDAVRGE"
BASE COUNT          403 a          824 c          835 g          383 t
ORIGIN      
        1 cccgaccggt tcatggcaga catgcgcagc gcccttgccg acgccgggat cgaaccggag
       61 cacattcaca ccgagctgtt cggcgccctg ccgccggtca atcccggaat cgtcgccacc
      121 tcgacgacgc cgccgcatcc gcctgcgggc gcagcgggca ccgggccgcc cgtgtcgttc
      181 tcccgcagcg ggctcacggt caactggtcg tccgagtacg ccagcatcct ggagctcgcc
      241 gaggcctgtg atgtccccac ccggttctcc tgccgaagcg gggtctgcca cacatgcgtc
      301 acccaactca tcgcgggcac gacggcctac ctccagcctc cgctggagca gccggccgac
      361 ggttcggtgc tgatatgcgt cgccgagccg tgcgaaggag tcgtgctgga tctttgatcc
      421 aggggttccg ctgatcacat agtgggaaca cacaggttca cggcggcgtt aggagaagcg
      481 tgaccacccg agatatcaca gctgcagagt tcaacgacac catcaacgac aacgagatcg
      541 tgctggtgga tttctgggcg tcgtggtgcg ggccgtgtcg cgcgttcgcg ccgacgttcg
      601 cggcgtcggc cgacaagcac cccgatgtgg tgcacgcgaa ggtcgatacg gaggctgagc
      661 agcagctcgc caccgccgcc gacattcgct ccatcccgac gttgatggcg ttcaagaagg
      721 gcaagctggt gttcaaccag gccggcgcac tgccgcctgc ggccctggag gacctcgtgg
      781 agcaggtcaa ggcgttcgac gtggacgcgg cgatcgccgc gcagagcaac ggcgaagagg
      841 gctgaggccg cacgcgatag cgtgcagtcc gtgaccgagc agaccaactt cgtcctcgtc
      901 gaccgcccgc gcccgcatgt ggcgctggtg acgctcaatc gcccggagcg gatgaactcc
      961 atggcgttcg acgtcatggt gcccctgaag ggcgtgctcg aggagctgag ctacgacaac
     1021 tccgtacgtg cggtcgtcct gaccggcgcg ggccgaggct tctcctcggg ggccgaccac
     1081 aagtccgccg gttccgtacc gaacatcggc gggctgaccc gacccacgtt cgcgctgcgg
     1141 tcgatggagg tgctcgacga cgtcattctc gcgctgcgca agatgcacca gcccgtcatc
     1201 gctgcggtga acggcgcggc catcggcggg ggactgtgcc tggcgttggc cgccgacatc
     1261 agggtcgccg gcgacggcgc ctacttccgg gcggcgggca tcaacaacgg cctgaccgcc
     1321 agcgagctcg ggctgagcta tctgctgccg agggcgatcg gcacgtcacg ggctttcgag
     1381 ctgatgctga ccgggcgtga cgtcgacgcc gaggaggccg aacgcatcgg tctggtgtcg
     1441 cgcgccgtgc cgggtgacca gctgctcgag acgtgctatg agatggctga gcggatcgcg
     1501 gcattctccc ggccgggaat cgagttgacc aaacgcacac tgtggactgg actggacgcc
     1561 gctagcctgg aagggcacat gcaggccgag ggcctgggtc aactgttcgt gcgcctactc
     1621 accgccaact tcgaagaagc ggtggccgcg cgcgcggaaa agcggcccgc ggcctttacc
     1681 gatgacaagt aagtgtttca aggagaagca gcgtgatcac cgcaacggac ctcgaggtcc
     1741 gcgcaggcgc gcgcacgctg ctgtccacgg acggaacctc cctgcgggtg cagcccggtg
     1801 accgcatcgg tcttgtcggc aggaacggcg cgggcaagac caccacgatg cgcatcctgg
     1861 caggcgaagg cgagccctat gcgggcgaca tcgcgcggac tggcgaaatc ggttacctgc
     1921 cacaggatcc cagagaggga aacctcgaga tgcttgctcg cgaccgggtg ctctcggcgc
     1981 ggggcctcga cacgctgctt tcggacctgg agaagcagca ggcgctgatg gccgaggtcg
     2041 ccgacgacgc gacccgtgat cgcgcggtgc gtcggtacgg ccagctcgag gagcggttcg
     2101 ccgccctcgg cggctacggc gccgagagcg aggcgagccg catctgcgcg agcctcggcc
     2161 tgcccgaacg ggtactcacc cagccgctgc gtaccctgtc cggcggtcag cgccgccgcg
     2221 tcgagctgtc ccgcatcctg ttcgcggcct ccgacaccgg cgccggttcg tcgaccacgc
     2281 tgctgctcga cgaaccgacc aaccacctcg acgctgactc gctggggtgg ctgcgcgact
     2341 tccttcgctc acataccggc gggttggtgg tgatcagcca caacgtcgac ttgttggccg
     2401 atgtcgtcaa ccgggtgtgg ttcctcgacg ccgtgcgcgg cgagg
//
LOCUS       DASSYW010000658         2097 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1743435, whole genome shotgun sequence.
ACCESSION   DASSYW010000658 DASSYW010000000
VERSION     DASSYW010000658.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2097)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2097)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2097
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1743435"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..650
                     /locus_tag="VFN38_10550"
     CDS             <1..650
                     /locus_tag="VFN38_10550"
                     /inference="COORDINATES: protein motif:HMM:NF018028.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HET9012243.1"
                     /translation="MVPIVGFIAWTLVGVFGLGAATLAFITAYRQENPVPAPRQPPVG
                     PPPVAPPPVAPPPVLPSDPSPLAASSAATPAATFDLPPPATSDLVAFPRAPFRDRLAA
                     FVLDVILVLLAKEILDLTRRDSAFFLLLLAYHVGFWTWKGTTVGGIICQLRLVRTDGT
                     PLRFADALVRGLASIFSLAVLGLGGLWILKDPERQAWHDKIAGTYVVKVPRNWPL"
     gene            complement(622..>2097)
                     /locus_tag="VFN38_10555"
     CDS             complement(622..>2097)
                     /locus_tag="VFN38_10555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012244.1"
                     /translation="SERDGGGIYIVSALGGEPRLIAREGRRPRFSPDGSRIAYSVGLP
                     RSGSTAPSSTFVIALAGGAPARVLSDFAVAHDPVWSPDGRALLVTAKRSRSEALADLD
                     WWVAATDGRDPVATGAARIPAVKTSFEGPTPGYQWRDDGVLFSDGTSLWSMPMSADGR
                     AGGSARRLTLGVERQYDPSMSRDDRLVFASAIATRVIDRVSLTIPDAQPVTLYADNRL
                     GEGRTSQTRDGSLLVFPRDREIWIKDLRTGKERFVVRAEGGNERSSINATVSPGGERI
                     AYNADSIGYVIETSGGVARRVCEPCEPHGFLSDGRRLLLSPRLNTTEVSLRVVDVVTA
                     ASQDIIAPLPNVHFDRPHASSDDRWLAFRREIGNQNKTFVTRLAPGAPPPPDAWQQVD
                     EPTVTGRPAGWSPDSRILYLLLDTDGFRCLWAQRVDASGRLEGKPYAARHFHGANESS
                     FGTSFGNAITADGFVLDGTRRMGNIWLLAAPKPRAASSSAP"
BASE COUNT          324 a          724 c          693 g          356 t
ORIGIN      
        1 acatggtacc gatcgttggt ttcatcgcgt ggacgctggt cggcgtgttc ggcctcggcg
       61 ccgcgacgct cgcgttcatc accgcgtatc gccaggagaa tccggttccc gcgccgcggc
      121 agccgccggt cgggccgccg ccggtcgcgc ctccgccagt cgcgccgccg cccgtgctgc
      181 catcggatcc gtcaccgctg gcggcgtcat cggccgcgac accggccgca acgttcgatc
      241 tgccgccgcc ggccacgtcg gatctggtgg catttccgcg cgccccgttt cgcgatcggc
      301 tggcggcgtt cgtcctcgat gtgatcctcg ttctcctcgc caaggaaatc ctcgacctga
      361 cgcgccgcga cagcgccttc tttctcttgc tcctcgcgta ccacgtcggc ttctggacgt
      421 ggaagggcac cacggtcggc ggaatcatct gtcagcttcg gctcgtgcgc accgatggaa
      481 cgccgctccg gttcgccgac gcgctggtgc gcgggctggc gagcatcttc tcgctcgcgg
      541 tgcttggatt gggaggcttg tggattctca aggatcccga gcgccaggcg tggcacgaca
      601 agattgccgg gacctatgtc gtcaaggtgc cgaggaactg gccgctctag gtttcggcgc
      661 cgctagcaac cagatgttcc ccatgcgccg cgttccatcg aggacgaagc cgtcggcggt
      721 gatcgcgttg ccgaagctcg tcccgaagct gctctcgttc gcgccgtgaa agtgacgtgc
      781 tgcgtacggc tttccctcga gacgccccga agcgtcgacc cgctgcgccc ataagcagcg
      841 gaatccgtcg gtatcgagca gcagatacag aattcgcgaa tcgggcgacc agccggccgg
      901 ccggccggtg actgtcggct cgtcgacctg ctgccacgcg tcgggcggcg gcggcgcgcc
      961 aggcgccagc cgcgtcacga acgtcttgtt ctgattgccg atttcgcggc gaaaggcgag
     1021 ccaccggtcg tcggaggacg cgtgcggccg atcgaaatgc acgttcggca gcggcgcgat
     1081 gatgtcctgg ctggctgcgg tgaccacatc cacgacacgc agcgagactt cggtggtgtt
     1141 caggcggggc gagagcagca gacgtctgcc gtccgacagg aagccgtgcg gctcgcacgg
     1201 ctcgcagacg cgtcgagcta cgcctcccga agtctcgatc acatagccga tgctgtcggc
     1261 gttgtatgcg atccgttccc ctccgggcga caccgtcgcg ttgatggacg atcgttcatt
     1321 ccctccctcc gcccgaacca cgaatcgctc tttgcccgtc cgcaagtcct tgatccagat
     1381 ttcgcggtcg cgtggaaaca caagcaggga gccgtcgcgg gtctggctgg ttcgcccttc
     1441 gccgaggcgg ttatcggcat acaaagtcac tggctgggcg tccggaatcg tcagcgaaac
     1501 gcggtcgatc acacgcgtgg cgatagccga tgcaaacacc agccgatcgt cccgactcat
     1561 tgacgggtcg tactggcgct cgacgccgag cgtcaagcgg cgcgcggatc cgcccgcacg
     1621 tccatcggcc gacatcggca tggaccacaa gctggtgccg tcggaaaaga gcactccgtc
     1681 gtcacgccac tgatatccgg gcgttggacc ttcgaacgac gtcttgaccg ccgggatgcg
     1741 cgcggcgccg gtggcgacgg gatcgcggcc atcggtggcc gcgacccacc agtcgaggtc
     1801 ggcgagcgct tccgaacggc ttcgcttcgc ggtgacgagc agggcgcgtc cgtcgggcga
     1861 ccacaccgga tcatgcgcga cggcaaagtc gctcaggacg cgcgccggtg cgccgcccgc
     1921 cagcgcaatg acgaaggtcg acgacggagc cgtcgaaccg ctgcgaggga gtcccaccga
     1981 atacgcgatg cgggacccgt ccggcgaaaa acgcggccgc cgtccctccc gtgcgatgag
     2041 ccgcggttcg ccgccaagcg ccgacacgat gtagatcccg ccgccgtcgc gctcgga
//
LOCUS       DASSYW010000659         2263 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1050239, whole genome shotgun sequence.
ACCESSION   DASSYW010000659 DASSYW010000000
VERSION     DASSYW010000659.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2263)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2263)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2263
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1050239"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            22..>2263
                     /locus_tag="VFN38_10560"
     CDS             22..>2263
                     /locus_tag="VFN38_10560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012245.1"
                     /translation="MRLRVLLPSLISLLLLSITDVAPAQVRAADVSSFDASRFSGLRY
                     RMIGPARGGRVTTVTGVNQEPHTFYMGATGGGVWKTTDAGASWHNVSDGAFATGSIGG
                     MDVADSNPNVVYVGTGSEAIRSNVSIGKGIYKSTDAGRSWRFVGLRDAGQIGAIVVHP
                     TNPDLVYAAVVGNPFANSPTRGVYRTRDGGATWQRVLFLSDSTGAVDIELQPGSPDVV
                     YASMWHGARRPWTIISGGAEDGIYKSTNGGDTWSKLGGGLPTGVVGKSDLAVSAAVPQ
                     RVYALVEAKVGGGLYRSDDAGTTWSLINTTPGLITRPFYYDNVDADPTNADVVYVGTE
                     GFYKSTDGGRTFRTMRTPHGDNHDMWINPRDGRIFIQSNDGGANVTLNGGLTWSSQEN
                     QPTAEIYQVAVDQQYPYRVYGAQQDNSTLIVPSLPVGAAGLDDPIQSWRQGPGCETGP
                     IIPHRTNPDTVYGGCKGQFSRMSLRGGQEQQHWIGAQSLYGNANQDLLYRFQRVSPME
                     VSPHDSRSVYYGSQYVHRTRDEGVTWERISPDLSANDPRYRATISGTPITIDVTGEEM
                     YATLYAIRESPVAPGVIWAGANDGPIHVTRDNGKSWTNVTPAGLPPGGRVQNIEPSPR
                     RAGAAYVAVVRYLLGDFSPYIYKTEDYGRSWTRLTTGANGIPADAPTRVVREDPDRPG
                     LLYAGTEFGMYLSFDDGAHWRPFQLNLPITPVTDIRVHRQDLVLSTQGRSFWILDDLT
                     PLHQMRD"
BASE COUNT          383 a          847 c          711 g          322 t
ORIGIN      
        1 cgtcactctc actgacactc aatgcgactg cgcgtcctgc ttccttcgct gatcagcctc
       61 cttctgctgt cgatcactga cgtcgccccc gcacaggtcc gcgccgccga cgtctcctcc
      121 ttcgatgcct cgcgcttctc gggcctgcgc tatcgcatga tcggccccgc gcgcgggggc
      181 cgagtcacga ccgtgaccgg tgtgaatcag gagccgcaca ccttctacat gggtgccacc
      241 ggcggcggcg tctggaagac caccgacgcc ggcgcgagct ggcacaacgt ctccgacggc
      301 gcgttcgcga ccggctccat cggtggcatg gacgtcgccg actccaaccc caacgtcgtg
      361 tacgtcggga cgggctccga agcgatccgc agcaacgtct ccatcggcaa ggggatctac
      421 aagtcgactg acgccggacg gagctggcgc ttcgtcggcc tgcgcgacgc gggacagatc
      481 ggcgcgatcg tcgtgcaccc gacgaacccc gacctcgtgt acgccgcggt cgtcgggaac
      541 ccgttcgcga actcgccgac gcgcggcgtc taccgcacgc gcgacggcgg cgcgacctgg
      601 cagcgcgtgc tctttctctc cgacagtacg ggcgcggtgg acatcgagct ccagcccggc
      661 agccccgacg tcgtctatgc ctccatgtgg cacggcgccc ggcgcccgtg gacgatcatc
      721 agcggcggcg ccgaggacgg catctacaag agcacgaacg gcggcgacac gtggtcgaag
      781 ctcggcggcg ggctccccac cggtgtcgtc ggcaagagcg acctcgccgt gtcggcggcg
      841 gtgccgcagc gcgtgtacgc gctcgtggaa gcgaaggtcg gcggcggcct ctaccgctcc
      901 gacgacgccg gcacgacgtg gagcctgatc aacacgacgc cggggctcat cacgcgcccc
      961 ttctactacg acaacgtcga cgccgatccc accaacgccg acgtcgtcta cgtcggcacg
     1021 gagggcttct acaagtccac cgacggcggc cgcaccttcc gcacgatgcg cacgccgcac
     1081 ggcgacaacc acgacatgtg gatcaacccg cgcgacgggc ggatcttcat tcagtccaac
     1141 gacgggggcg ccaacgtgac gctcaacggc ggactgacct ggagcagcca ggagaatcag
     1201 cccacggccg agatctatca ggtggcggtg gaccagcagt acccgtatcg cgtgtacggc
     1261 gcgcagcagg acaacagcac actcatcgtc cccagcctcc ccgtcggtgc ggcggggctc
     1321 gacgatccga tccagagctg gcgccagggt ccgggatgcg agacgggccc catcattccg
     1381 caccgcacca accccgacac ggtgtacggc ggctgcaagg gacagttcag ccgcatgagc
     1441 cttcgcgggg gtcaggagca gcagcactgg atcggcgcgc agtcgctcta cggcaacgcg
     1501 aaccaggatc tgctctatcg ctttcagcgc gtctcaccga tggaagtgtc accgcacgac
     1561 tcgcgcagcg tgtactacgg ctcgcagtac gtgcaccgca cgcgcgacga gggcgtcacc
     1621 tgggagcgca tcagccccga cctcagcgcg aacgatccgc gctaccgcgc cacgatctcc
     1681 ggcacgccga tcacgatcga cgtgaccggc gaggaaatgt acgccacgct ctacgccatc
     1741 cgcgagtcac ccgtcgcccc cggcgtgatc tgggccggcg cgaacgacgg accgatccac
     1801 gtcacgcgcg acaacgggaa gagctggacg aacgtcacgc cggccggcct gccgccgggc
     1861 ggtcgcgtgc agaacatcga gccgtcgccg cgccgcgccg gcgccgctta cgtcgccgtc
     1921 gtgcgctacc tcctcggcga cttttcgccg tacatctaca agaccgagga ctacggcagg
     1981 agctggacgc gactcaccac cggcgcgaac ggcattcccg ccgacgcgcc cacgcgcgtc
     2041 gtgcgcgagg atcccgatcg ccccggcctg ctctacgccg gcaccgagtt cgggatgtac
     2101 ctctcgttcg acgacggcgc ccactggcgc cccttccagc tcaacctgcc gatcacgccg
     2161 gtcaccgata tccgcgtgca tcggcaggac ctcgtgctct ccacccaggg gcgctcgttc
     2221 tggatcctcg acgacctcac gccgctccac cagatgcgcg acg
//
LOCUS       DASSYW010000660         2354 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_165163, whole genome shotgun sequence.
ACCESSION   DASSYW010000660 DASSYW010000000
VERSION     DASSYW010000660.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2354)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2354)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2354
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_165163"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1340
                     /locus_tag="VFN38_10565"
     CDS             <1..1340
                     /locus_tag="VFN38_10565"
                     /inference="COORDINATES: protein motif:HMM:NF016648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="FecR domain-containing protein"
                     /protein_id="HET9012246.1"
                     /translation="TFTHDCEASMSSPVSPSGEDAPIPLPIRTPIADEEALHDAFVAE
                     YPTLAAEARAELGPDAAVLCPKVVEGAFVRAWDARAKFQTPAELHQFLVEDVHHAAAR
                     ALSRRAAAQRFAGHENHSKHAAHHPTDVVDMEQSWAHVLHALHGETHSPQALAEAAAA
                     SRHEAAEHIAVIEKSVPVWKVLGVIVAVAAVLFGAVAVMNYLGTDAKIASAVNAADVR
                     VVPSLPAQVAVVTLDDGSTVRLAPESKLSIPQGFGPDLRAVKIEGAATFTVAPGQPKN
                     FQVHARDAVVIAKGTVFTVRRYEGDEATTVVVQEGAVDVRHGDKTQPLAAGAALVVAS
                     DKTARPATAVESDEAAGWNSGTLAVANRPLREVLPLLRRWYGLTVSVPQDTLLARMVT
                     MRASLDSSRQAIRGIEESTGLEFGYIGPNMVFREKAAAAAKAPARKGAAKTKR"
     gene            1428..>2354
                     /locus_tag="VFN38_10570"
     CDS             1428..>2354
                     /locus_tag="VFN38_10570"
                     /inference="COORDINATES: protein motif:HMM:NF036723.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HET9012247.1"
                     /translation="MSDEFHQEGPRLGNQYDTDLLLRAWLRWRLPDGMLDEIEPGLSR
                     LGHRAATDLLALGDAAEAAPPRHVPYDPWGRRIDDIVVSDAWRALERVSAEEGVVATA
                     YERAHGAWSRVHQMARLYLFHPSSATYSCPLAMTDGAARYLELYGDERTRDAYARLTS
                     RDPSRFWTSGQWMTERTGGSDVATTTTVARAGPHAGEYRLRGTKWFTSATTSPMAMTL
                     ARIEGAPPGGRGLSVFMVTLRDAGGALQGIRVDRLKDKLGTRALPTAELTLLDTPALL
                     VGGEGDGVRKIAALFNVTRVYNAVAAVAGMARA"
BASE COUNT          339 a          844 c          876 g          295 t
ORIGIN      
        1 gaaccttcac gcacgactgc gaggcttcca tgtcatcacc cgtatcaccc agcggcgaag
       61 acgcgcccat cccgctcccg atccgcaccc ccatcgccga cgaggaggcg ctgcacgacg
      121 ccttcgtcgc cgagtacccc accctcgccg cggaagcccg ggccgagctc ggccccgacg
      181 cggcggtcct gtgtcccaag gtggtagaag gggcgttcgt ccgcgcgtgg gacgcgcgcg
      241 cgaagttcca gacccccgcc gagctgcacc agtttctcgt cgaggacgtg catcatgccg
      301 cggcgcgggc gctgagccgc cgcgccgccg cgcagcgctt cgccggccac gagaaccaca
      361 gcaagcacgc ggcgcatcat cccaccgacg tggtggacat ggagcagtcg tgggcgcacg
      421 tgcttcacgc cctccatggg gagacgcaca gcccgcaggc gctcgccgag gcggcggcgg
      481 cctcccggca cgaggcggcc gagcacatcg ccgtcatcga gaagagcgtg ccggtgtgga
      541 aggtgctcgg cgtcatcgtc gcggtggccg ccgtgctgtt cggcgccgtg gccgtgatga
      601 actacctcgg taccgacgcg aagatcgcct ccgcggtgaa cgccgccgac gtgcgcgtcg
      661 tgccgtcgct gccggcgcag gtggccgtgg tcacgctcga cgacggaagc acggtgcgcc
      721 tcgcccccga gtccaagctc tccattcccc agggcttcgg ccccgacctg cgcgccgtga
      781 agattgaggg cgccgccacc ttcaccgtgg cgcccggcca gccgaagaac ttccaggtgc
      841 atgcgcgcga cgccgtcgtg atcgccaagg gcacggtgtt caccgtgcgc cgctacgagg
      901 gcgacgaggc caccacggtg gtggtgcagg agggagcggt ggacgtgcgg cacggcgaca
      961 agacgcagcc gctggccgcg ggagccgccc tggtggtggc ctccgacaag acggcgcgac
     1021 cggcgacggc ggtggaatcc gacgaggcgg cgggatggaa ctcgggaacg ctggccgtcg
     1081 ccaaccggcc gctgcgcgag gtcctgccgc tgctccgccg ctggtatggc ctcacggtga
     1141 gcgtaccgca ggataccctg ctcgcgcgga tggtgacgat gcgcgcctcg ctcgattcgt
     1201 cgaggcaggc gattcgcggc atcgaggaga gcacgggcct ggagttcgga tacatcggtc
     1261 cgaacatggt gttccgggag aaggccgcgg ccgcggccaa ggcgccggcc cgcaaggggg
     1321 cggcgaagac gaagcggtag cttcgtcgcc gcggcgaagg atggtcgagc gagcccctcg
     1381 ccgcgtcgcg gcggggggct cgctggcaac gacacgcgag gacggcgatg agcgacgagt
     1441 ttcatcagga ggggccgcgg ctcggcaacc agtacgacac cgacctgctg ctgcgcgcct
     1501 ggctccgctg gcggctgccc gacgggatgc tcgacgagat cgagcccggc ctgtcgcggc
     1561 tcggccaccg ggccgccacc gacctgctcg cgctgggtga cgccgccgag gcggcgccgc
     1621 cccgccacgt cccgtacgat ccgtggggcc ggcgcatcga cgacatcgtc gtgagcgacg
     1681 cgtggcgcgc gctcgagagg gtgtcggccg aggagggggt ggtggccacg gcgtacgagc
     1741 gcgcgcacgg cgcctggtcg cgcgtgcacc agatggcgag gctctacctc ttccacccct
     1801 cgtcggccac ctacagctgc ccgctggcga tgacggacgg cgcggcgcgc tacctggagc
     1861 tgtacggcga cgagcgcacg cgcgacgcgt acgcgcggct cacctcgcgc gacccatccc
     1921 gcttctggac gtcggggcag tggatgaccg agcgcaccgg cggctccgac gtcgccacca
     1981 ccaccacggt cgcgcgcgcc ggtccccacg ccggcgagta ccggctgcgc ggcacgaagt
     2041 ggttcacctc ggcgacgacg tcgccgatgg cgatgaccct ggcgcgcatc gagggcgcgc
     2101 cgccgggcgg gcgggggctg agcgtcttca tggtgacgct gcgcgacgcc ggaggcgcgc
     2161 tgcaggggat ccgcgtggac cggctgaagg acaagctcgg gacccgcgcg ctccccacgg
     2221 cggagctcac cctcctcgac acgccggcgc tgctcgtcgg cggggagggg gacggcgtgc
     2281 ggaagatcgc ggcgctgttc aacgtgacgc gggtgtacaa cgccgtcgcc gcggtggccg
     2341 gcatggcccg cgcg
//
LOCUS       DASSYW010000661         2675 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_831159, whole genome shotgun sequence.
ACCESSION   DASSYW010000661 DASSYW010000000
VERSION     DASSYW010000661.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2675)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2675)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2675
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_831159"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..466
                     /locus_tag="VFN38_10575"
     CDS             <1..466
                     /locus_tag="VFN38_10575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012248.1"
                     /translation="TGEHVEVLTFDFPRVTTTGTELRLRWGTTVVPVEIGVSPSMRPV
                     VMTEKQLAPYLGTYAVTFAGPDGKRSPEMKVALVNAKGTLRGIIDTQGEPVEMEYIPT
                     DTPHRFMPAFLKDGKIFDVEVTPADFQVVNGRATGFALMFEGKPWMEGKRKN"
     gene            complement(480..1274)
                     /locus_tag="VFN38_10580"
     CDS             complement(480..1274)
                     /locus_tag="VFN38_10580"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF019887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HET9012249.1"
                     /translation="MIGLVCIDVDGTLVGSSGEVAEATWAAAERTRARGVRLAICSGR
                     PAFGKARGYAKRLEPAGWHVFQNGASVLHLPGGNTRSRPLDPDAVRALVERSRLTGRP
                     LELYGDAEHAVEMDVPRSREHAKLLGIPFVRRNLLTFGAPVVRAQWLLAHDEVDDVLA
                     EPHDGLTLSHSLSPVMPDTSFLNVTPAGVDKGEAVHAVAREYGVPLERVMMVGDGAND
                     VPAMRIVGAAVAMGNAERAAREAARFHVGDVDRGGLVEALELALTL"
     gene            1426..2478
                     /locus_tag="VFN38_10585"
     CDS             1426..2478
                     /locus_tag="VFN38_10585"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent alcohol dehydrogenase"
                     /protein_id="HET9012250.1"
                     /translation="MIDTVGYAAQSATAPLGPFSFSRRDPGPTDVRIDILFCGVCHSD
                     LHTARGEWAGTAYPCVPGHEIVGRVNATGAKVKGFKAGDMVGVGCMVDSCQKCASCAE
                     GLEQFCESGMVGTYNSPDKHTGGVTYGGYSKDIVVDEKFVLRISDKLDPAAAAPLLCA
                     GITTWSPLRHWTVGKGTKVGVVGLGGLGHMAIKLAHALGAHVVLFTTSPGKTADALKL
                     GANEVVVSKDADAMAARRGTLDFILNTVAAPHDLDPFLMLLKRDGVMTLVGAPAEPHP
                     SPTVFNLIMGRRSIAGSLIGGIAETQEMLDFCAEHGIASDIEKIPIQKINEAYERMLK
                     SDVKYRFVIDMTSLSG"
BASE COUNT          432 a          910 c          964 g          369 t
ORIGIN      
        1 gacgggcgag cacgtggagg tgctgacctt cgacttcccg cgcgtgacga cgacgggcac
       61 cgagctgcgc ctgcgctggg gaaccaccgt ggtgccggtg gagatcgggg tgtcaccgag
      121 catgcggccg gtggtgatga ccgagaagca gctcgcgccg tacctcggca cctacgcggt
      181 gaccttcgcc ggtcccgacg gcaagcgctc gccggagatg aaggtcgcgc tcgtgaacgc
      241 gaagggtacg ctgcgcggca tcatcgacac gcagggcgag ccggtggaga tggagtacat
      301 ccccaccgac acgccgcacc gcttcatgcc ggccttcctg aaggacggga agatcttcga
      361 cgtggaggtg acgccggcgg acttccaggt ggtgaacggt cgagccaccg gcttcgccct
      421 gatgttcgag ggcaagccct ggatggaagg gaagcggaag aactgagtgg cgagggcggc
      481 tacagggtga gcgccagctc gagcgcctcc accagcccgc cgcgatcgac gtcgccgacg
      541 tgaaagcgcg ccgcctcgcg ggcggcgcgc tcggcgttgc ccatggccac cgcggcgccg
      601 acgatccgca tcgcgggcac gtcgttcgcg ccgtcaccca ccatcatcac gcgctccagc
      661 ggcacgccgt actcccgcgc caccgcgtgc acggcctcgc ccttgtccac gccggcgggg
      721 gtgacgttga ggaagctggt gtcgggcatc accggcgaca gcgagtgcga cagggtgagc
      781 ccgtcgtgcg gttcggccag cacgtcgtcc acctcgtcgt gcgccagcag ccactgggcc
      841 cgcaccaccg gcgcgccgaa ggtcaggagg ttgcgccgca cgaaggggat gccgagcagc
      901 ttcgcgtgct cgcgggagcg gggcacgtcc atctccaccg catgctcggc atcgccgtac
      961 agctcgagcg ggcgtccggt gaggcgcgac cgctcgacga gcgcgcgcac ggcatcggga
     1021 tcgagcgggc gcgagcgggt gttgccgccc ggcaggtgca gcacgctggc gccgttctgg
     1081 aacacgtgcc agccggcggg ctcgagccgc ttcgcgtagc cgcgcgcctt cccgaacgcc
     1141 ggccgccccg agcagatggc gaggcgcacg ccgcgcgcgc gggtgcgctc ggcggcggcc
     1201 caggtggcct cggccacctc gccggagctg ccgacgagcg tgccgtcgac gtcgatgcag
     1261 accagtccga tcatgccgga atatcgtggg tcgccgcccg gaacgggcat cgcgcggcgg
     1321 gggccatcgg gcgaccgcat cgcccggcca agcgagtgcg gcgcgaaact tcccgtggga
     1381 ccaagggatt gagtcctttc accccggaac ccaggtcgcc acacgatgat cgatacagtc
     1441 ggctacgccg cccagagcgc caccgcgccg ctcggaccct tctccttcag ccgtcgcgac
     1501 cccggtccga ccgacgtccg catcgacatc ctcttctgcg gcgtctgcca ctccgacctc
     1561 cacaccgcgc gcggcgaatg ggcggggacc gcctacccgt gcgtgccggg ccacgagatc
     1621 gtcggccgcg tgaacgccac gggggcgaag gtgaaggggt tcaaggccgg tgacatggtg
     1681 ggcgtggggt gcatggtgga ctcctgccag aagtgcgcga gctgcgccga ggggctcgag
     1741 cagttctgcg agagcgggat ggtggggacg tacaacagcc ccgataagca caccggcggg
     1801 gtgacctacg gcggctactc gaaggacatc gtggtggacg agaagttcgt cctgcggatc
     1861 tccgacaagc tcgaccccgc ggccgccgcg cccctgctgt gcgccggcat caccacctgg
     1921 tcgccgctgc ggcactggac ggtggggaag gggacgaagg tcggcgtcgt ggggctcggc
     1981 gggctggggc acatggcgat caagctcgcc cacgcgctcg gcgcgcacgt ggtgctgttc
     2041 accacctcgc cgggcaagac ggcggacgcg ctgaagctgg gcgcgaacga ggtggtggtg
     2101 tccaaggacg ccgacgcgat ggcggcgcgc cgcggcacgc tcgacttcat cctcaacacc
     2161 gtcgccgccc cgcacgacct cgatcccttc ctcatgctgc tcaagcgcga cggcgtgatg
     2221 acgctcgtcg gcgcgccggc ggagccgcac ccgtcgccga cggtgttcaa cctgatcatg
     2281 gggcggcgca gcatcgccgg ctcgctcatc ggcggcatcg ccgagacgca ggagatgctg
     2341 gacttctgcg ccgagcacgg gatcgcgtcg gacatcgaga agatcccgat ccagaagatc
     2401 aacgaagcct acgagcggat gctgaagagc gacgtgaagt accggttcgt gatcgacatg
     2461 acttctctca gcggctgagg tgcgctgata cgggggatcc acgttgggag ttggccgttg
     2521 accgttcacc gttcggcgtt tcacggcgtg aaccgcagtg aaacgccgaa cggttgacgg
     2581 tcaacggcca actcccaacg tggatccccc cagccctcga agcggaactc gggtcgaagc
     2641 ggagctcgcg ttggagcgga gctcaggcgg aagcg
//
LOCUS       DASSYW010000662         4451 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_324835, whole genome shotgun sequence.
ACCESSION   DASSYW010000662 DASSYW010000000
VERSION     DASSYW010000662.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4451)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4451)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4451
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_324835"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(254..1354)
                     /locus_tag="VFN38_10590"
     CDS             complement(254..1354)
                     /locus_tag="VFN38_10590"
                     /inference="COORDINATES: protein motif:HMM:NF016027.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine--N-acetylmuramyl-
                     (pentapeptide) pyrophosphoryl-undecaprenol
                     N-acetylglucosamine transferase"
                     /protein_id="HET9012251.1"
                     /translation="MAARKTVLFAGGGTGGHLYPGLAIARTLVRLNPTVRPVFVGALR
                     GIEKTVLPGTEFPHLLLDLHPLYRTKPWENWRTIRGAIGAWRQLAALVRAERPSLVVG
                     TGGYAAGLALAYAALHRIPIVQQAGDSYPGLTARAFRRWTKEYYLAFPEAGRVIGGVA
                     SQHVDTGAPIEPPPRPRPDRAAARRAWGFPERGGQVLLIYGGSQGSRAMNLVVAEWVK
                     RGLPPDLYLIWMTGKASHAEFAPLDGGRVRVREYLSPIADAYAATDIALVRAGAMTTA
                     ELFAWEIPAVLVPLPTAAADHQSVNARTLEAAGAAIHLPQAELTTDRLDAAVRSLVEH
                     PDAMARLAAGARARARPDAAETIARRILALME"
     gene            complement(1364..2557)
                     /locus_tag="VFN38_10595"
     CDS             complement(1364..2557)
                     /locus_tag="VFN38_10595"
                     /inference="COORDINATES: protein motif:HMM:NF013279.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsW/RodA/SpoVE family cell cycle protein"
                     /protein_id="HET9012252.1"
                     /translation="MATAASARERPHAMAQVRERWRMGSEARGLVVVTAALLAFGLAV
                     LYSASAIVAMQEGRNSWYYIARQASGVLAGIVAFAIAAKLPAEKWQEWAWPLMYVAIA
                     SLFLCLVLPERIAPRINGSKRFLFGSSFQPSEFGKLAVVVWTSMLIVKKGPQLRRLTK
                     GVLPFFVVVGLCDILAALEPDLSVAMLYTLLLAVLLFVGGVRIAHFVFLGALAIPLMW
                     RQIEKVQYAVLRLASFLDPGRAPAQVGYQLNQSLIAVGSGGAFGQGFGQGRQQYGFLP
                     FPYSDFIASNIGEEWGFIGLTAVTLAFAAYALLGFRIARKARGPFVQLVAVGLTFVTV
                     LTAYLHIGVVVGLLPTTGLTLPFVSYGRSNIVLTMFFTGILVNVGSTRERVVGGGATD
                     PLSSR"
     gene            complement(2557..3963)
                     /gene="murD"
                     /locus_tag="VFN38_10600"
     CDS             complement(2557..3963)
                     /gene="murD"
                     /locus_tag="VFN38_10600"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR01087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008764 -
                     UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HET9012253.1"
                     /translation="MPVRSLTEALPAAWTRGEISVLGLARSGRAAAELLRRAGADVYA
                     SDAGTGDAVDHAATALEKLGVVVQRGGHDLGRIAKSALVVASPGIPPEAPPLAAARDA
                     GVPIVGELEVALHFLPHQRYVAITGTNGKTTTTAIAHKLLEGLGYDAVAAGNIGTPLA
                     EVALRARQPDWIALETSSFQLHDTPSIAPTAGVLTNLSANHLDRYEGVAEYFGDKARL
                     FRNANEHSVWVSNADDAEVQAMVQGVRGTHLRFTTGPGAADGYFDRARVQLVVLGAPL
                     IDRQDLVLLGDHNVANALAAALAVMGADEAHRTDDARARVADALRRFRALEHRIEPAG
                     RYGDVEWINDSKSTNVASTLVALKGMQRPTVLLLGGRHKGEPYDALADELRRTVKLVV
                     AYGEAAPLVEEDLGDVVPVARLGSSFDEVLARARDAAAPGDAVLLSPACSSYDMFDNY
                     EERGRTFKRLAAELGERR"
     gene            complement(3965..>4451)
                     /gene="mraY"
                     /locus_tag="VFN38_10605"
     CDS             complement(3965..>4451)
                     /gene="mraY"
                     /locus_tag="VFN38_10605"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008963 -
                     phospho-N-acetylmuramoyl-pentapeptide-transferase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HET9012254.1"
                     /translation="AVMAIFAYLIGRVDASRYLGIFYLQHAGELTIFCAAMVGALIGF
                     LWFNTFPAQVFMGDTGSLALGGALGAVAIMLKSEFLLIFVGIVFIAETVSVLLQRFVF
                     KYHRRKHGLEYAQQHRVFKRAPLHHHFEVKGWSEQQVVVRFWIIGIIGAFLALSTLKL
                     R"
BASE COUNT          722 a         1601 c         1551 g          577 t
ORIGIN      
        1 cggggtgcga gtcgcacccg gtcacgcgga tgccgcggag cacgaacagc tcggcgaggg
       61 cgctcatccc cgcgccggcg atgccgacga agtggatggg tctcgggtcg gcaggatcga
      121 ggagtcgtgt catgagcgcg tcgaaatata cggcgcggga cgcagcggta ggaaggcaat
      181 ccgtcgtcct gcgcgcagcg aaggacgcac gtgcaggtcc ttcgctgcgc tcaggacgac
      241 aggctcacga cgctcattcc atcagcgcca ggatccgtcg cgcgatcgtc tccgccgcat
      301 ccgggcgcgc gcgggcgcgc gcgcccgcgg cgagacgcgc catcgcgtcg ggatgctcga
      361 cgagcgagcg gacggccgcg tcgagccggt cggtcgtgag ctcggcctgc ggcagatgga
      421 tggccgcgcc cgccgcttcg agagtgcgcg cattcaccga ctggtggtcg gcggccgccg
      481 tcggcagcgg cacgagcacg gcgggaatct cccaggcgaa cagctcggcc gtcgtcatcg
      541 cgccggcgcg cacgagggcg atgtcggtgg cggcgtacgc gtcggcgatg ggcgacagat
      601 actcgcgcac gcgcacgcgg ccgccgtcca gcggggcgaa ctccgcatgg ctcgccttgc
      661 ccgtcatcca gatcaggtag aggtcgggcg gcagcccgcg cttcacccac tccgcgacga
      721 cgaggttcat cgcccgcgag ccctggcttc cgccgtagat cagcagcacc tggccgccac
      781 gctcgggaaa gccccacgcg cggcgtgccg cggcgcgatc gggacgcggg cgcggcggcg
      841 gctcgatcgg ggcgccggtg tccacgtgct gcgacgccac gccgccgatc acgcggccgg
      901 cctcgggaaa ggcgagatag tactccttcg tccaccgtcg gaaggcacgc gcggtgaggc
      961 cgggatagct gtcacccgcc tgctgcacga tcgggatgcg atggagcgcc gcgtaggcga
     1021 gcgcgaggcc ggccgcgtat ccacccgtgc ccaccaccag cgacggccgc tcggcgcgca
     1081 cgagcgccgc gagctgccgc catgcaccga tggcgccgcg gatcgtgcgc cagttctccc
     1141 acggcttcgt gcgatagagg ggatggagat cgagcagcag atggggaaac tccgtgcccg
     1201 gcagcaccgt cttctcgatg ccgcgcagcg cgcccacgaa caccggacgc accgtgggat
     1261 tgagccgcac cagcgtccgc gcgatcgcga ggccgggata caggtgcccg cccgtgccgc
     1321 cgccggcgaa gagaaccgtc ttccgagccg ccatcgggcg tcctcagcgt gatgagagag
     1381 ggtcggtggc gccgccgccg acgacgcgtt cccgcgtgct gccgacgttc acgaggatgc
     1441 ccgtgaagaa catcgtgagc acgatgttcg aacggccgta cgacacgaag ggcagcgtca
     1501 gccccgtggt aggcaagagc ccgaccacga cgccgatgtg caggtacgcg gtgagcaccg
     1561 tgacgaaggt cagcccgacc gccaccagct gcacgaacgg gccgcgcgcc ttccgggcga
     1621 tgcgaaagcc gagcagcgcg tacgcggcga acgccagcgt caccgccgtc aggccgatga
     1681 atccccactc ctcgccgatg ttgctggcga tgaagtcgct gtacggaaag ggcaggaagc
     1741 cgtactgctg acgcccctgc ccgaacccct ggccgaaggc gccccccgag cccacggcga
     1801 tgagcgactg gttgagctga tagcccacct gcgccggcgc gcgtccggga tcgaggaagg
     1861 aggcgagccg cagcacggcg tactgcacct tctcgatctg tcgccacatg agcgggatgg
     1921 ccagcgcgcc caggaagacg aaatgtgcga tccgcacccc gccgacgaac agcagcaccg
     1981 ccagcaggag ggtgtacagc atcgcgacgg agaggtccgg ctcgagcgcg gcgaggatgt
     2041 cgcagagtcc cacgaccacg aagaagggca gcaccccctt cgtgagccgg cgcagctgcg
     2101 gccccttctt cacgatcagc atggacgtcc agacgacgac ggcgagcttg ccgaactccg
     2161 acggctggaa cgagctgccg aacaggaagc gcttggaccc gttgatgcgc ggcgcgatgc
     2221 gctccggcag cacgagacag agaaacaggg acgcgatcgc gacgtacatg agcggccacg
     2281 cccactcctg ccacttctcc gccggcagct tggcggcgat ggcgaaggcg acgatgccgg
     2341 ccagcacgcc gctcgcctgc cgggcgatgt agtaccagct gttgcgcccc tcctgcatgg
     2401 ccacgatcgc gctcgcgcta tagagcaccg cgaggccgaa cgcgaggagg gccgccgtga
     2461 cgaccacgag cccgcgcgcc tccgatccca tgcgccaccg ctcgcgaacc tgcgccatgg
     2521 cgtgcggacg ctcgcgggcg ctcgccgcgg tggccactac cggcgttccc cgagctcggc
     2581 ggcgagccgc ttgaaggtcc gcccgcgctc ctcgtagttg tcgaacatgt cgtagctcga
     2641 acaggccggc gagagcagca ccgcgtcgcc gggcgccgcc gcgtccctcg cgcgcgccag
     2701 cacctcgtcg aacgacgagc cgagccgcgc cacggggacg acgtcgccga gatcctcctc
     2761 gaccagcggc gccgcctcgc cgtacgcgac gacgagcttc accgtgcgcc gcagctcgtc
     2821 cgccagcgcg tcgtacggct cgcccttgtg ccgcccgccg agcaggagga cggtggggcg
     2881 ctgcatcccc ttcagcgcca cgagcgtgga cgccacgttc gtggacttgg aatcgttgat
     2941 ccactcgacg tcgccgtacc ggccggccgg ctcgatgcgg tgctccaggg cgcgaaagcg
     3001 gcgcagcgcg tcggccaccc gggcccgggc gtcgtccgtg cggtgcgcct cgtcggcgcc
     3061 catcacggcc agcgccgccg ccagcgcgtt cgccacgttg tgatcgccga gcagcacgag
     3121 atcctgccgg tcgatcaggg gagcaccgag caccacgagc tgcacccggg cgcgatcgaa
     3181 gtagccgtcc gccgcgccgg gccccgtggt gaagcgcagg tgcgtgccgc gcaccccctg
     3241 caccatcgcc tgcacctcgg cgtcgtccgc attgctcacc cacaccgagt gctcgttcgc
     3301 gttgcggaag aggcgcgcct tgtccccgaa atactccgcg accccctcgt atcggtcgag
     3361 atggttggcg gacaggttgg tcaggacacc cgccgtcggt gcgatgctcg gcgtgtcgtg
     3421 cagctggaac gacgacgtct cgagcgcgat ccagtccggc tgcctcgcgc ggagcgccac
     3481 ctcggcgagc ggagtcccga tgttgcccgc ggcgacggca tcgtacccga gcccctcgag
     3541 cagcttgtgg gcgatcgccg tcgtcgtcgt cttgccgttg gtgccggtga tggcgacgta
     3601 gcgctggtgc ggcaggaagt gcagcgccac ctcgagctcg cccacgatcg gaactccagc
     3661 gtcgcgagcg gcggccagcg gcggcgcttc cggaggaatc ccggggctcg cgacgacgag
     3721 cgcgctcttc gcgatccgcc cgagatcgtg cccgccgcgc tgcacgacca cgccgagctt
     3781 ctccaacgcc gtcgcggcat gatccacggc gtcgccggtg cccgcgtcgc tcgcgtacac
     3841 gtcggcgccc gcccggcgaa gcagctcggc cgcggcgcgg ccgctgcgcg cgagcccgag
     3901 cacgctgatc tcgccgcgcg tccacgccgc cggcagcgcc tcggtcaggg agcgaaccgg
     3961 catcctagcg cagcttcagc gtgctgagcg cgaggaacgc gccgatgatc ccgatgatcc
     4021 agaagcgcac caccacctgc tgctcgctcc accccttcac ctcgaagtga tggtgcagcg
     4081 gcgctcgttt gaagacccgg tgctgctgcg cgtattccag gccgtgcttt cgacgatggt
     4141 acttgaacac gaaacgctgc agcagcaccg agaccgtctc cgcgatgaac acgatgccga
     4201 cgaagatgag caggaactcg gacttgagca tgatcgcgac ggcgcccagc gccccgccca
     4261 gcgcgagcga gccggtgtcg cccatgaaga cctgcgcggg aaaggtgttg aaccagagga
     4321 agccgatcag cgcgccgacc atcgcggcgc agaagatcgt gagctccccc gcgtgctgga
     4381 ggtagaagat gccgagatac cggctcgcgt ccacgcggcc gatgaggtag gcgaagatcg
     4441 ccatcacggc g
//
LOCUS       DASSYW010000663         2684 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1199599, whole genome shotgun sequence.
ACCESSION   DASSYW010000663 DASSYW010000000
VERSION     DASSYW010000663.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2684)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2684)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2684
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1199599"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..291
                     /locus_tag="VFN38_10610"
     CDS             <1..291
                     /locus_tag="VFN38_10610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012255.1"
                     /translation="DVHARTQNGSLNVQLTGTGWDGAGLDAETQNGSVRLAVPERYAA
                     TIETGTVNGSMHTDFPVTVQGRISRRLTLPLNGGGRTIRALTTNGAVRISRR"
     gene            400..2391
                     /locus_tag="VFN38_10615"
     CDS             400..2391
                     /locus_tag="VFN38_10615"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF013592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family metallopeptidase"
                     /protein_id="HET9012256.1"
                     /translation="MHHRFLPAFGALLLAAAPLAAQVATPATRTATMPRFDDTGVGDT
                     SIFAPLDLPPGNLFRAGSGAPGPMYWQNHADYDIRASLDTTTKTLTGSLRLRYTNNSP
                     DTLHFIWMQMEQNAFKDKSLNSLIYPQESRFGARGFEGGNVVDRFDQVLPGRTARRAS
                     VMRRDNGTVMKVDLAEPLAPGKVATFDVAWHFLVPEHGADRMGREGALYELAQWYPRV
                     NVYDDLRGWNTEPYLGQGEFYLEYGDYTMELTVPAGYIVAGTGALTNPREVLTPAAAA
                     RLAKAATSATTVNIVTLDELHSGAARPRATGTQTWKFAAKNVRDVAWAASPEYLWDAS
                     SWNGILAQAFYRPSAIDPWKDAADMTRMSLEEYSTRWFRYPWPQMSAVEGPISGMEYP
                     MLVMEAKSEDKYDLFNVVTHEIGHNWFPMIVGSNKRVYMWQDEGFNTFINTFSEARRY
                     PEKGDQMARALGERGYVEQAMIAGADVPVDVMPDRIDARLLGLASYVKPSVGLQLLRQ
                     EIMGPAAFDDAFRTYIRRWAYKHPSPADFYRTMEDVGGRRLDWFWREWFKENPKFDQA
                     IDSVASSHSGDVQNVTVQYANRARGVLPIHARFWFSDGSSERFDYPAEVWSRNTVRYE
                     RSYAFRGKTLSRIELDPDRRLPDVNRANNSWGTAAGPRP"
BASE COUNT          458 a          917 c          921 g          388 t
ORIGIN      
        1 gacgtgcacg cgcggacgca gaacggctcg ctcaacgtcc agctcaccgg caccggctgg
       61 gacggcgccg gcctcgacgc cgagacgcag aacgggtcgg tacggctggc ggtgccggaa
      121 cggtacgcgg ccaccatcga gaccgggacg gtgaacggct cgatgcacac cgatttcccg
      181 gtgacggtgc aggggcgcat ctcgcgccgt ctcaccctgc ccctgaacgg cggggggcgg
      241 acgatccgcg cgctgacgac caacggtgcg gtgcggatca gccggcgctg atctcgacgg
      301 ggcgctcggc gctgcgcgcc ttcgctcata gggcgttcca cgcccgccga tcccgtccgc
      361 ccctctatct tccgtcatcc ctgtcccgag acgtctccaa tgcaccaccg gttcctgccg
      421 gccttcggcg cgctgctgct cgccgccgcg ccgctcgcag cacaggtcgc gacgcccgcg
      481 acccgcaccg ccacgatgcc gcgcttcgac gacaccggcg tcggcgacac gtcgatcttc
      541 gcgcccctcg acctgccgcc cggcaacctg ttccgcgccg gctccggcgc gcccggcccg
      601 atgtactggc agaaccacgc cgactacgac atcagggcgt cgctcgacac cacgacgaag
      661 accctcaccg gctcgctgcg gctgcgctac accaacaact cgcccgacac gcttcacttc
      721 atctggatgc agatggagca gaacgccttc aaggacaagt cgctcaactc gctcatctac
      781 ccgcaggagt cgcgcttcgg cgcgcgcggg ttcgaggggg gcaacgtcgt cgaccggttc
      841 gaccaggtgc tcccggggcg caccgcccgc cgggcgagcg tgatgcggcg cgacaacggc
      901 accgtgatga aggtggacct cgccgagccg ctcgcgccgg gcaaggtggc gacgttcgac
      961 gtcgcctggc acttcctggt gcccgagcac ggcgccgacc ggatggggcg cgagggggcg
     1021 ttgtacgagc tcgcccagtg gtatccgcgc gtgaacgtgt acgacgacct gcgcgggtgg
     1081 aacaccgagc cgtacctcgg gcagggcgag ttctatctcg agtacggcga ctacacgatg
     1141 gagctcaccg tccccgcggg ctacatcgtg gcgggcaccg gcgcgctcac caatccgcgc
     1201 gaggtgctca cccccgcggc ggccgcgcgg ctcgccaagg cggcgacgtc ggccacgacc
     1261 gtcaacatcg tcacgctcga cgagctgcac tcgggtgccg cgcggccgcg cgccaccggc
     1321 acccagacct ggaagttcgc ggcgaagaac gtgcgcgacg tcgcgtgggc cgcgtcgccc
     1381 gagtacctgt gggacgcgag cagctggaac ggaatcctcg cgcaggcctt ctaccgcccc
     1441 tcggcgatcg atccatggaa ggacgccgcc gacatgacgc gcatgtcgct ggaggaatac
     1501 tcgacccggt ggttccggta tccctggccg cagatgagcg cggtggaggg tccgatcagc
     1561 gggatggagt acccgatgct cgtgatggaa gcgaagagcg aggacaagta cgacctgttc
     1621 aacgtggtga cgcacgagat cgggcacaac tggttcccga tgatcgtcgg ctcgaacaag
     1681 cgcgtctaca tgtggcagga cgaggggttc aacaccttca tcaacacctt cagcgaggcg
     1741 cgccgttatc cggagaaggg cgaccagatg gcgcgggcac tgggtgagcg gggatacgtg
     1801 gagcaggcga tgatcgccgg cgccgacgtg ccggtggacg tgatgcccga ccgcatcgac
     1861 gcgcgcctgc tcgggctggc gtcgtacgtg aagccgagcg tggggctcca gctgctgcgg
     1921 caggagatca tgggtccggc ggcgttcgac gacgccttcc gcacctacat ccggcgctgg
     1981 gcgtacaagc acccctcgcc ggccgacttc taccgcacga tggaggacgt cgggggacga
     2041 cggctcgact ggttctggcg cgagtggttc aaggagaacc cgaagttcga ccaggcgatc
     2101 gacagcgtgg cgagctcgca cagcggcgat gtccagaacg tgaccgtcca gtacgccaac
     2161 cgcgcccgag gggtgctgcc gatccacgca cggttctggt tcagcgacgg cagttcggag
     2221 cggttcgact acccggccga agtgtggagc cggaacacgg tgcgttacga gcggagctat
     2281 gcgttccgcg gcaagacgct gagccggatc gagctggacc cggaccgccg gctgcccgat
     2341 gtgaaccgcg ccaacaacag ttgggggacg gcggcgggac cgcgaccgta gcggccgaag
     2401 ccgtcacgca agtcgttgca ccgaaagggc ggccggcact ccggccgccc tttctgcaac
     2461 ggtcccgttt ggcaatcttt ttgcgcgaat tgcgattatg cccattatcg ttaggttgac
     2521 gaaaagggcg cgccagcagg acgacacccg ggcgcctctc atgcgcgatc gatggcgcac
     2581 accgcgaacc caacgctgat gacggacgag cggcgattcg aagagctgtt gaccgagttc
     2641 gagcgggtcg gagtggatct gaacagcttc ccggcgggga tcac
//
LOCUS       DASSYW010000664         2118 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_182710, whole genome shotgun sequence.
ACCESSION   DASSYW010000664 DASSYW010000000
VERSION     DASSYW010000664.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2118)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2118)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2118
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_182710"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1047
                     /locus_tag="VFN38_10620"
     CDS             <1..1047
                     /locus_tag="VFN38_10620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012257.1"
                     /translation="ADLLDHYFSAERTKIYMGMTVTESGPVSLHEPYSAFTLPLMDSG
                     SIFDGYYGFVRDGIWRVTEELAELNHELGIDLLLASTVAGVDVETGELEYDRAGTRAA
                     TTFDHLVLATDPLTAARLVGNDALIRQVEQKRMLGTSGKVTLFFREPVRWRDAPSTSA
                     AGGDTAFRFIFAVDSIAAFEAATLRVLNADVEYAPGYIQIYCEGAAMRQLGLAEPFDR
                     LTLFFKNMALGRRGDALPDVEAAVTAQVLARIANPEACVWSRLLAPTDLQHLFLFPGG
                     NLDHTMLVGGQTFFDRQFSADPETRFYAFGGWPNVSYCGAGAYPCGSIAGTPGYMCAQ
                     QLIRQLSSASGGVR"
     gene            complement(1112..1297)
                     /locus_tag="VFN38_10625"
     CDS             complement(1112..1297)
                     /locus_tag="VFN38_10625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012258.1"
                     /translation="MRITLTALGILSLIVGCIWFLQGINVLPGSFMTGQPKWAGYGGV
                     LVVAGIALLVMANRRRV"
     gene            complement(1400..1954)
                     /locus_tag="VFN38_10630"
     CDS             complement(1400..1954)
                     /locus_tag="VFN38_10630"
                     /inference="COORDINATES: protein motif:HMM:NF012309.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006801 - superoxide metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase family protein"
                     /protein_id="HET9012259.1"
                     /translation="MTMTRLLPALCASAIASSMLACGGTNPAPATSASQARSVTVKLS
                     NANGDSIGTARLSPDRAGVRITLAVGGLSAGEHAIHVHQTPQCDGPAFTSAGGHFNPD
                     QKHHGLGNPDGPHAGDMPNFTVDATGRSNATVVAPGVTLDDGPHSVFTGSGTALVIHE
                     KADDMKSDPAGNAGARIACGVIRK"
BASE COUNT          323 a          691 c          752 g          352 t
ORIGIN      
        1 gccgacctgc tcgaccatta cttctcggcc gaacgcacga agatctacat ggggatgacg
       61 gtgacggaga gcgggccggt ctcgctccac gagccgtact cggcgttcac gctgccgctc
      121 atggattcgg ggtcgatctt cgatggctat tacggcttcg tgcgcgacgg gatctggcgc
      181 gtcaccgagg agctggcgga gctgaatcac gagttgggta tcgacctgct cctcgccagc
      241 acggtcgcgg gcgtcgacgt cgagacgggc gagctcgagt acgatcgcgc tggcacgcga
      301 gcagcgacga cgttcgacca tctcgttctg gcgacggatc cgttgacggc ggcgcgactg
      361 gtgggcaacg acgcgttgat ccggcaggtg gagcagaagc gcatgctggg caccagcggc
      421 aaggtgacgc tgttcttccg cgagccggtg cggtggcggg acgcgccgtc gacgagcgcg
      481 gccggcggcg acacggcgtt ccggttcatc ttcgcggtcg attcgatcgc ggcgttcgag
      541 gcggcgacgc tgcgcgtcct caacgccgac gtcgagtacg cgcccgggta catccagatc
      601 tactgcgagg gcgcggcgat gcggcagctc ggtctcgccg agccgttcga ccgcctaacg
      661 ctgttcttca agaacatggc gttgggccgg cgcggggacg cgctgccgga tgtggaggcg
      721 gcggtcacgg cgcaggtgct cgcgcggatc gccaacccgg aggcctgtgt ctggagccgt
      781 ctcctggcac cgacggacct gcagcacctc tttctcttcc ctggcggcaa cctggaccac
      841 acgatgctcg tcggcgggca gacgttcttc gaccgtcagt tctccgccga ccccgagacg
      901 cggttctacg cgttcggcgg gtggcctaac gtctcgtact gcggggccgg ggcgtatccc
      961 tgcgggtcga tcgccgggac gccgggctac atgtgtgcac agcagctgat ccggcagctg
     1021 tcgagcgcct ccggcggggt gcgctagaac agcggctgct ggacgtgtcg ccggctgcga
     1081 cgtggtgcag cggcagggcg aacgcggcga ctcagactcg ccggcggttc gccatgacga
     1141 gaagagcgat tcccgcgacc accagtacac cgccgtagcc ggcccacttc ggctggcccg
     1201 tcatgaagct gccgggcagg acgttgatcc cctgcaggaa ccagatgcat cccacgatca
     1261 gggacaggat gcctaacgcg gtcagcgtga tgcgcatggg ggtcaccagt catcgagcgt
     1321 gttttgcgcg aatgccgagc gccagccaga agagccagga acgccgcaca gtgcggcgga
     1381 tcgagacgcc agacgttcgc tacttcctga tcacgccgca ggcgatgcgg gcgccggcgt
     1441 tgcccgccgg atcggacttc atgtcgtcgg ccttttcgtg aatcacgagc gcggttccgc
     1501 tgccggtgaa caccgagtgc ggaccgtcgt cgagcgtcac gcccggtgcc acgacggtcg
     1561 cgttcgagcg acctgtcgca tcgaccgtga agttcggcat gtcacccgcg tgcggaccat
     1621 cggggttgcc cagcccgtgg tgcttctggt cggggttgaa gtgcccaccc gccgaggtga
     1681 acgccgggcc atcgcactgc ggcgtctgat gcacgtggat cgcgtgctcg cccgcgctca
     1741 ggccgccgac cgcgagcgtg attctcacgc ccgctcggtc cggcgagagc cgcgcggtgc
     1801 cgatgctgtc gccgttcgcg ttgctcagct tcacggtgac cgacctggcc tgtgacgccg
     1861 aggtcgcggg cgcgggattg gtgccaccgc aggcgagcat cgagctcgcg atcgcggagg
     1921 cgcagagagc gggtagaagg cgagtcattg tcatgagtgg aaatactacc gtgtaggcga
     1981 ggcgatcgac tagccagact cggcgagcgc ggcgagcttc gcgagggcca ttcgccaccc
     2041 ggtctcgttg tccacgagcg acacgccgga tggcagtccc tcgtgcacgc cgacgacgtc
     2101 cgtcccgccg tcggccgc
//
LOCUS       DASSYW010000665         3377 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_843998, whole genome shotgun sequence.
ACCESSION   DASSYW010000665 DASSYW010000000
VERSION     DASSYW010000665.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3377)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3377)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3377
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_843998"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..710)
                     /locus_tag="VFN38_10635"
     CDS             complement(<1..710)
                     /locus_tag="VFN38_10635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BMP family ABC transporter substrate-binding
                     protein"
                     /protein_id="HET9012260.1"
                     /translation="MKKLLILVAALLVVHVALLFVHPSGAAVPPSGDAVDVGVVFDLG
                     GRGDKSFNDGAYLGAERAEKELGVRVRFIEPGEGSDRESGLRLLAAEGMDLVVGVGFI
                     FTDDLTQLAKEYPNTNFAGVDYSVATDANGAVIAPPANLAALKFREEQGSFLVGALAA
                     LVGKSKKVGFVGGMDFPLIQKFEMGYKAGVKKVCPDCEVVSQYAGVTPEAFRNPGRGK
                     ELALSQYQQGVNVIFHASG"
     gene            883..2391
                     /locus_tag="VFN38_10640"
     CDS             883..2391
                     /locus_tag="VFN38_10640"
                     /EC_number="1.4.3.16"
                     /inference="COORDINATES: protein motif:HMM:NF005701.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008734 - L-aspartate oxidase activity
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-aspartate oxidase"
                     /protein_id="HET9012261.1"
                     /translation="MPDRLRTRFLVVGSGVAGLHTAWRASQHGDVLLLTKRSLFDSAT
                     AYAQGGIAAALGAGDSPKLHRQDTLAAGAALCDAAAVQVLVEEGPARVRELQTAGAEF
                     DLDPKGGLLLGREAAHSTNRIVHAHGDQTGAEVARTLIARVRDSKRIRVLERARVLDL
                     IVSRGECIGVRASLAGKAVEIIADATVLATGGCGQVYRYTTNPVVATGDGFAIAHRAD
                     VTLADMEFVQFHPTALDTPENPLALISEAVRGEGAILVNERGERFMQKAHALAELAPR
                     DVVARAIFREQKKHRTYLDARKLGRGFAKRFPGIFALCSARGIDPRKDLIPITPAAHY
                     MMGGVVTDLNGHSSMKRLYAVGEVARTGVHGANRLASNSLLEGLVFAERVARDLATTA
                     PLTRIPAPKKWAVPPFSDRGAAQVAADRVREVMWQHAGIARTAKGLRTAVGELAEIEE
                     RLPTGATEELNLVQTARLIVEAALRRKESRGGHYRSDFPRAKSHWRGRHIEL"
     gene            2652..3089
                     /locus_tag="VFN38_10645"
     CDS             2652..3089
                     /locus_tag="VFN38_10645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012262.1"
                     /translation="MKKLVLLLALAALSVGTPRATAQGAKYVVVVNPKNPIRRLSQSQ
                     LSRIYLGKLQGWEIEGKVEPVLVLDQKSGSPLRAKFTQDVLRKSVSEADAYWRQEIYA
                     GRNFPPLEQSEAEALAAVRGTVGGIAYVSADADLTGVKVVSVK"
     gene            3086..>3377
                     /locus_tag="VFN38_10650"
     CDS             3086..>3377
                     /locus_tag="VFN38_10650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012263.1"
                     /translation="MIGHVVGAIDRLQLRQKLNLAPTVAAVALGLIFATNLLLGIAVQ
                     RQQTRIQRGYYPSVQLSGQLAELLVSTQRALQDAAAANDPERLAVADSLRYVV"
BASE COUNT          486 a         1230 c         1192 g          469 t
ORIGIN      
        1 cccgaggcat ggaagatcac gttcaccccc tgctggtact ggctgagggc gagctccttg
       61 ccgcggcccg ggttgcggaa cgcctcgggg gtgacgccgg cgtactgcga gacgacctcg
      121 cagtcggggc acaccttctt caccccggcc ttgtagccca tctcgaactt ctggatgagg
      181 gggaagtcca tcccgcccac gaagcccacc ttcttcgact tcccgacgag cgccgcgagg
      241 gcgccgacga ggaaggaacc ctgctcctcg cggaacttga gcgcggccag gttggcgggg
      301 ggcgcgatca ctgcgccgtt ggcgtcggtg gccaccgagt agtccacgcc ggcgaagttg
      361 gtgttcggat actccttcgc gagctgggtg aggtcgtcgg tgaagatgaa gccgacgccg
      421 acgacgagat ccatcccctc ggccgccagc agccggagtc ccgactcgcg gtccgatccc
      481 tcgcccggct cgatgaaccg gacccgcacc ccgagctcct tctcggcgcg ctcggccccg
      541 aggtaggcgc cgtcgttgaa cgacttgtcg ccgcgcccgc cgaggtcgaa cacgacgccg
      601 acgtccaccg cgtcgcccga cggcggcacg gccgcgcccg acgggtgcac gaacaggagg
      661 gccacgtgga cgacgagcag cgcggccacg aggatgagca gcttcttcat ggggcggaaa
      721 agtcgtgcgc ggcgcagggt ggggcaaggc ggcaggacgg tgcggcggta gggcggtgcg
      781 gccgtgaggc ggtgactgcc cgttcgccgt tcaccgctca ccgttcaccg ctcaccgttt
      841 cccgtttccc gcttcccctt cccggcgcgc tacattcccc gcatgcccga ccgtcttcgc
      901 acccggttcc tcgtcgtcgg cagtggcgtc gccggcctgc acacggcctg gcgcgcgtcg
      961 cagcacggcg acgtcctgct gctcaccaag cggtcgctgt tcgacagcgc gaccgcgtac
     1021 gcgcagggcg gcatcgccgc ggcgctgggg gccggcgact cgccgaagct gcaccggcag
     1081 gacaccctgg ccgccggcgc ggcgttgtgc gacgcggcgg cggtgcaggt gctggtggag
     1141 gaggggccgg cgcgggtgcg cgagctccag accgccggcg ccgagttcga cctggatccc
     1201 aagggggggc tgctgctcgg ccgcgaggcg gcgcactcca ccaaccgcat cgtgcacgcg
     1261 cacggcgacc agacgggagc cgaggtggcg cgcacgctca tcgcgcgcgt gcgcgacagc
     1321 aagcggatcc gcgtgctcga gcgcgcgcgc gtgctcgacc tgatcgtgtc gcgcggcgaa
     1381 tgcatcggcg tgcgggccag cctggccggc aaggcggtgg agatcatcgc cgacgccacc
     1441 gtgctggcca ccggggggtg cggccaggtc taccgctaca ccaccaaccc cgtcgtcgcc
     1501 accggcgacg gcttcgccat cgcgcaccgc gccgacgtga cgctggccga catggagttc
     1561 gtgcagttcc accccaccgc gctcgacacg ccggagaatc cgcttgccct catctccgag
     1621 gcggtgcgcg gcgaaggggc gatcctcgtg aacgagcgcg gcgagcggtt catgcagaag
     1681 gcgcacgccc tggccgagct ggccccgcgc gacgtggtgg cccgggcgat cttccgcgag
     1741 cagaagaagc accggaccta cctggacgcc cggaagctcg gccgcggctt cgccaagcgc
     1801 ttccccggca tcttcgcgct gtgttccgcg cgcggcatcg acccgcgcaa ggatctcatc
     1861 cccatcacgc cggccgccca ttacatgatg ggcggggtcg tcacggacct gaacggccac
     1921 tccagcatga agcgcctgta cgcggtcggc gaagtggcgc gcaccggggt gcacggcgcg
     1981 aaccggctgg cgtcgaactc gctgctggag gggctggtgt tcgccgagcg ggtcgcgcgc
     2041 gacctcgcca ccacggcgcc actcacgcgc atcccggcgc cgaagaagtg ggcggtgccc
     2101 ccgttctccg accgcggcgc ggcgcaggtg gcggcggacc gggtgcgcga ggtgatgtgg
     2161 cagcacgccg ggatcgcgcg gaccgccaag gggctgcgca ccgccgtcgg cgagttggcc
     2221 gagatcgagg agcggctgcc cacgggcgcc accgaggagc tcaacctcgt ccagacggcg
     2281 cgactcatcg tcgaggcggc gctgcggcgc aaggagtcgc gcggcggcca ctatcggagc
     2341 gacttcccgc gggcgaagag ccactggcgg ggacgccaca tcgagctcta gaggcgccgg
     2401 gccggccgcg tgagggatcg ggccccgccg gaccggtgat gcggcggtga ttcgcgcgtc
     2461 actcaccgcc ggtgacatga gaccggcctc atgcgtcctg cggatgctgc cgatactcct
     2521 ctcgaggcag cgccccgacg ccgacgccgg cgtccccggc gcgtgccggt gcaccttcgc
     2581 agttccttcc gccccacccc cacctgtggc ccggttcgcc gagtgcccgg tgtcgaacgc
     2641 ttgaggattc cgtgaaaaag ctcgtcctgc tcctcgctct cgcggccctg tccgtcggca
     2701 ccccccgcgc caccgcccag ggagcgaaat acgtcgtggt cgtcaatccg aagaacccca
     2761 tccggcgcct cagccagagc cagctctcgc ggatctatct cggcaagctc cagggctggg
     2821 agatcgaggg gaaggtggag cccgtgctgg tgctcgatca gaagtccggc tcgccgctgc
     2881 gcgcgaagtt cacccaggac gtcctgcgca agtccgtctc cgaggcggat gcgtactggc
     2941 ggcaggagat ctacgccggc cgcaacttcc cgcccctcga gcagagcgag gccgaggcgc
     3001 tggccgcggt gcgcggcacg gtgggcggca tcgcctacgt gtccgccgac gccgacctca
     3061 cgggcgtgaa agtcgtgagc gtgaagtgat aggccatgtc gtcggggcca tcgaccggct
     3121 ccagctccga cagaagctca acctcgcccc gaccgtcgcc gccgtcgcgc tcgggctcat
     3181 cttcgccacc aacctgctgc tcggcatcgc cgtgcagcgg cagcagacgc gcatccagcg
     3241 cgggtactac ccgtcggtgc agctgagcgg tcagctcgcc gagctgctcg tctccacgca
     3301 gcgcgccctc caggacgccg cggcggccaa cgatccggag cgcctggccg tggccgattc
     3361 gctgcgctac gtcgtgg
//
LOCUS       DASSYW010000666         2602 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_702045, whole genome shotgun sequence.
ACCESSION   DASSYW010000666 DASSYW010000000
VERSION     DASSYW010000666.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2602)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2602)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2602
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_702045"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..464)
                     /locus_tag="VFN38_10655"
     CDS             complement(<1..464)
                     /locus_tag="VFN38_10655"
                     /EC_number="2.4.99.-"
                     /inference="COORDINATES: protein motif:HMM:NF013915.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA];
                     GO_process: GO:0042158 - lipoprotein biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase family
                     protein"
                     /protein_id="HET9012264.1"
                     /translation="MSMPIVHHPFDFAIGPITLTGFGLAMMAAFGMAHWVSQEVLEER
                     GDDPMVMNDVTFAALIGTIIGAKVYYAALQGSVGALFTRGGFVFWGGFIGAVVLCAIV
                     IRFKRLHFLRIADGTAVGIAAGYAIGRTGCWAVGDDYGRVWNGPLAVSFPQGL"
     gene            complement(464..1966)
                     /locus_tag="VFN38_10660"
     CDS             complement(464..1966)
                     /locus_tag="VFN38_10660"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HET9012265.1"
                     /translation="MRLPRLAAQTVGALLLAVPLAAQRPTPRAPVKGAPAKPAAQAPA
                     APAPPTTGYLQGIAVDSLHGGPLAGALISVEGSTRMAITDSLGRFLVDSIKPGSYRVL
                     VDHPMLDTLGISLVTPPLQIGANELTRTVVPVPTGEFLVKLFCPEAKRALGPGALVGR
                     VREPDSDSAAVGARVSLVWYDPDPPGLPANLRISKKPPRVREATVGADGIYRLCGLPE
                     QYDAKLQAQRKDGGATAEVPVVQDGGLLALRSVSVAALPAVAAKDSAGAPIRQPRGSA
                     RVFGKVVNRNGAPVAGARVGLMGTSAATLTRTNGDFVLDSLPAGTQAIVVRQIGYRPT
                     EVAVDLSSRTPSRVTVQLGAFVPELSPVEVVERRDEGLQKVGFLDRKRNSAGGYFIGT
                     DAIEKRNALKFSDILRTTPGIRVSEQNGQAMITSTRSSQANGCVTMYVDGAAWQQIEP
                     GDLDSFVQPSEVAAIEVYSGSAVPPQFSTPGQNCAAVVVWTKTRVLRRGK"
     gene            2060..2524
                     /locus_tag="VFN38_10665"
     CDS             2060..2524
                     /locus_tag="VFN38_10665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012266.1"
                     /translation="MRPPRFLLLLAGGLMIAAPARAQTAPAAAPTAADRPRLAQLPAD
                     SLERARRFTTWLYTNQTDSLFANMDTTGQRDMKGPQGWEETVAALAMRAGSEEQLIAE
                     RWVTRLGKRQYWRTAKFSGMPDPFLVRWVIVAPGVIAGLGLGPASQAPPVDP"
BASE COUNT          389 a          939 c          923 g          351 t
ORIGIN      
        1 agcccctgcg ggaagctcac ggcgagcggg ccattccaca cgcggccgta gtcgtcgccc
       61 accgcccagc atccggtgcg gccgatcgcg taaccggccg cgatccccac cgccgtgccg
      121 tcggcgatgc gcaggaagtg cagccgcttg aagcggatca cgatggcgca gagcacgacg
      181 gcgccgatga agccgcccca gaacacgaac ccgccgcgcg tgaagagcgc gcccacgctc
      241 ccctgcagcg cggcgtagta gaccttggcc ccgatgatcg tgccgatgag cgcggcgaag
      301 gtgacgtcgt tcatcaccat cggatcgtcg ccgcgctcct cgagcacctc ctgcgagacc
      361 cagtgcgcca tgccgaaggc cgccatcatg gccagcccga aacccgtgag ggtgatcgga
      421 ccgatggcga agtcgaacgg atggtggacg atcggcatcg acatcacttg ccccggcgca
      481 ggacgcgcgt cttggtccac accacaacgg cggcgcagtt ctgccccggc gtggagaact
      541 gcggcggcac cgccgagccg ctgtacacct cgatcgccgc gacctcgctc ggctgcacga
      601 acgagtcgag gtcgcccggc tcgatctgct gccacgcggc gccgtcgacg tacatcgtca
      661 cgcacccgtt ggcctgcgac gagcgcgtcg aggtgatcat cgcctgcccg ttctgctccg
      721 acacgcgaat gcccggcgtg gtgcgcagga tgtcggagaa cttgagcgcg ttgcgcttct
      781 cgatcgcgtc ggtgccgatg aagtagccgc cggccgagtt ccgcttgcgg tcgaggaagc
      841 cgaccttctg cagcccttcg tcgcgacgct ccacgacctc gacgggcgag agctccggca
      901 cgaaggcccc gagctgcacg gtcacgcgcg acggcgtgcg cgaggacagg tcgacggcga
      961 cttccgtcgg ccgatagccg atctggcgca cgacgatcgc ctgggtcccc gccggcagcg
     1021 aatcgaggac gaagtcgccg ttggtgcggg tgagcgtggc ggcgctggtg cccatgagcc
     1081 ccacgcgcgc cccggccacc ggtgcgccgt tccggttcac gaccttgccg aacacgcggg
     1141 cgctgccgcg cggctgccgg atgggcgcgc cggcactgtc cttcgcggcg acggccggca
     1201 gcgcggccac gctgacgctc cgcagcgcga gcagcccgcc gtcctgcacg acgggcacct
     1261 ccgccgtggc gccgccgtcc ttgcgctgcg cctggagctt ggcgtcgtac tgttccggca
     1321 atccgcacag acgatagatg ccgtccgccc ccaccgtggc ttcgcgcacg cgagggggct
     1381 tcttgctgat gcgcagattc gccggcagcc ccggcggatc gggatcgtac cagacgagcg
     1441 acacgcgcgc gcccacggcc gcggagtcgc tgtccggctc ccgcacgcgc ccgaccagcg
     1501 cgcccgggcc gagcgcgcgc ttggcctcgg ggcagaacag cttcacgagg aactcgcccg
     1561 tcgggacggg caccaccgtg cgcgtcagct cgttcgcccc gatctgcagg ggcggcgtca
     1621 cgaggctgat gccgagggta tcgagcatcg ggtgatcgac gagcacgcga tacgaccccg
     1681 gcttgatgct gtccacgaga aagcggccga gcgagtcggt gatcgccatc cgggtggatc
     1741 cctcgacgga gatgagggcg ccggcgagcg gtccgccatg gaggctgtcg acggcgatgc
     1801 cctggagata gccggtcgtg ggcggggcgg gcgcggcggg cgcctgcgcc gccggcttgg
     1861 cgggcgcgcc cttcaccggc gcgcgggggg tggggcgctg ggccgccaac ggcacggcga
     1921 gcaggagcgc tccgacggtc tgagcggcga gtcgtggcag acgcatgcag ggaatatagg
     1981 ttgggagcac cggctctacc cgtgaatccc tcgtcgaggt ccaggcgtac gggacgacac
     2041 ctccatcgga gacccaccaa tgcgcccacc ccgtttcctg ctgctcctcg ccggcggcct
     2101 gatgatcgcc gcgccggcgc gcgcccagac cgctccagcc gcggccccga ccgccgccga
     2161 ccgtcctcgg ctcgcccagc ttcccgccga ctccctggag cgggcgcgca ggttcacgac
     2221 gtggctgtac accaatcaga cggacagcct gttcgccaac atggacacca cgggacagcg
     2281 cgacatgaag gggccgcagg gctgggagga gacggtggcc gcgctggcca tgcgcgccgg
     2341 gagcgaggag cagctgatcg ccgagcggtg ggtgacgaga ctcggcaagc ggcagtactg
     2401 gcgcacggcg aagttcagcg gcatgccgga tcccttcctc gtgcgctggg tgatcgtcgc
     2461 gccgggcgtg atcgccggcc tgggcctcgg tccggccagc caggcgccgc cggtcgaccc
     2521 ctgaccggcc cgacggcctg actgctcatg cgggccgcgg gaatggaacc tgcccttgtc
     2581 tccggcatca tctaaccggg ag
//
LOCUS       DASSYW010000667         2182 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_359887, whole genome shotgun sequence.
ACCESSION   DASSYW010000667 DASSYW010000000
VERSION     DASSYW010000667.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2182)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2182)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2182
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_359887"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1322)
                     /locus_tag="VFN38_10670"
     CDS             complement(<1..1322)
                     /locus_tag="VFN38_10670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012267.1"
                     /translation="MCNCSRSPGTQELEVRPPVHALPWRLRKAVRQGRLTMQEALAVR
                     ARGLSIAQAIRRRRRAALARGTSRPASSREPWRPNAEVEEMEGETSGARISRRTAPPM
                     RASFAAPTADAPVKPAGQPLSTRYACFPESAAYCIGWTVTEGPFGLALARFTDAACDS
                     TFVSSVLVASPTFVAMVKELDKRYVGLGTRQLCRTNKAGASEPIPWQDEFKPDANGVL
                     TKGPFKGRRVIEFVASKDGSYFAASGSMDSNVEWDTIAIQDHPPGKSAHAAASKAARV
                     HHIAHETAHAFRFVTGANGPRGATRAARIHQFIQDELETRKIEAKVIAEAARAKGGEF
                     LQGDDITGALDIDGVERSFGSGKLMMTYLEKAVLEELMIEAIRALGPTATKQQIEAID
                     RAVDSVPIFRHGFYDQDHASILLPPKGAAANGPRATAYGRYRLLRRAI"
     gene            complement(1381..>2182)
                     /locus_tag="VFN38_10675"
     CDS             complement(1381..>2182)
                     /locus_tag="VFN38_10675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012268.1"
                     /translation="RLSVMRRAYEYNHHYGLSLFGRAVPELRPADPRLRFLESFHDLL
                     RQAAVFYREAGDNTVTPDAFPLLVAIKATHLILSEGAHNQFRDLPWTARAEMLVQQWM
                     LARPEARDFLRGRRMVPYTENWMGAVDAMKRLQRWTDVSVSHFSDLAIFGERILLSIR
                     HVGWATFTDPAIASDWALAFRAEIQGYIHAYRTVTGVNLSDDVVDVRRSGDARYLPPS
                     VHLRQRQVEQQAAMQQVASGNGNGTIGAGATPDGTRARALPSGVAREW"
BASE COUNT          295 a          782 c          761 g          344 t
ORIGIN      
        1 tcgatggcgc gacgcagcaa gcgatagcgc ccgtacgccg tggccctcgg accattggcg
       61 gcggcgccct tcggtggcag gaggatcgac gcgtggtcct gatcgtagaa gccgtgcctg
      121 aagatcggca cgctgtcgac cgcacgatcg atcgcctcga tctgctgctt ggtcgccgtg
      181 gggccgagtg cgcggatcgc ctcgatcatc agctcctcga gcactgcctt ctcgaggtag
      241 gtcatcatga gcttgccgga cccgaaggaa cgctcgaccc cgtcgatgtc gagggcgccc
      301 gtgatgtcgt ctccctggag gaactcgccc cccttcgccc tggccgcttc ggcgatcacc
      361 ttcgcctcga tcttccgcgt ctccagctcg tcctggatga attggtgaat tcgcgccgcc
      421 ctcgtcgctc cgcgtggtcc gttggcgccc gtcacgaagc ggaacgcgtg cgccgtctcg
      481 tgcgcgatgt ggtgcacgcg cgcggccttc gacgccgcgg cgtgcgccga cttgcccggc
      541 ggatgatcct ggatcgcgat ggtgtcccac tcgacgttgc tgtccatcga tcccgaggcc
      601 gcgaagtacg agccgtcctt gctcgcgacg aactcgatga cgcgacgccc cttgaacggc
      661 cccttcgtga ggacgccgtt cgcgtcgggc ttgaactcgt cctgccaggg gatcggctcc
      721 gacgcgcccg ccttgttcgt gcggcacagc tgccgcgtgc cgaggccgac gtagcgcttg
      781 tcgagctcct tcaccatcgc gacgaacgtg ggcgaggcga cgagcaccga gctgacgaag
      841 gtgctgtcgc acgccgcgtc cgtgaagcgc gcgagcgcga ggccgaacgg cccctcggtc
      901 accgtccatc cgatgcagta cgcggccgat tcgggaaagc acgcgtagcg ggtcgagagc
      961 ggctggcccg ccggcttcac gggcgcatcg gcggtcggcg ccgcgaagct ggcgcgcatc
     1021 ggcggcgcag tgcgacgcga gatgcgcgca ccgctcgtct cgccctccat ctcctccacc
     1081 tccgcgttcg ggcgccaggg ctcgcgcgac gacgccggtc gcgacgtgcc ccgggcgagc
     1141 gccgcgcgcc gccggcgccg tatcgcctgc gcgatcgaca gcccgcgcgc gcgcacggcg
     1201 agcgcttcct gcatcgtcag gcggccctgc cgcaccgcct tgcggagccg ccagggtagt
     1261 gcatgaaccg gcggtcggac ttccagctcc tgcgtgccgg gtgacctgct gcagttgcac
     1321 atgggattcg ctccgccgca gtcgcggccg gtgagggacg gcgtgaggtc ggcgcgctgc
     1381 ctaccactcc cgcgccacgc cgctcggcag cgctcgtgcg cgcgtgccgt ccggtgtggc
     1441 gccggcgccg atcgtcccgt tcccgttgcc gctggccacc tgctgcatcg ccgcctgctg
     1501 ctcgacctgg cgctgccgca ggtgcaccga cggcggcagg taacgggcgt cgccggaccg
     1561 gcgcacgtcc accacgtcgt cggacaggtt gacgcccgtg accgtgcggt aggcgtggat
     1621 gtagccctgg atctcggcgc ggaaggccag cgcccagtcc gaggcgatgg ccggatccgt
     1681 gaacgtcgcc cagccgacgt ggcggatcga gagcaggatg cgctcgccga agatggcgag
     1741 gtcgctgaag tgactcacgc tgacgtcggt ccagcgctgc agccgcttca tcgcgtccac
     1801 cgcgcccatc cagttctccg tatacggcac catgcggcgg ccgcgcagga agtcgcgcgc
     1861 ctccggacgc gccagcatcc actgctgcac gagcatctcg gcccgcgcgg tccacgggag
     1921 gtcgcggaac tggttgtgcg caccctccga gaggatgagg tgcgtcgcct tgatcgccac
     1981 cagcagcggg aaggcgtcgg gcgtcaccgt gttgtcgccg gcctcgcggt agaacaccgc
     2041 ggcctgtcgc agcaggtcgt ggaagctctc gaggaagcgc aggcgcgggt cggccggccg
     2101 cagctcgggc accgcgcgac cgaagagcga cagcccgtag tggtggttgt actcgtaagc
     2161 gcggcgcatc acgctcaaac gg
//
LOCUS       DASSYW010000668         2317 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_433613, whole genome shotgun sequence.
ACCESSION   DASSYW010000668 DASSYW010000000
VERSION     DASSYW010000668.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2317)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2317)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2317
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_433613"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..503)
                     /locus_tag="VFN38_10680"
     CDS             complement(<1..503)
                     /locus_tag="VFN38_10680"
                     /inference="COORDINATES: protein motif:HMM:NF012880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016624 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HET9012269.1"
                     /translation="MADAPRDLERPDAARLRDSGFELLRAMLRVRRLEERCAELYQQE
                     KIRGFLHLYIGEEAVAVGAMQALTPDDNVVATYREHGHALVRGISAGSIMAEMFGKQN
                     GCCRGRGGSMHLFDVVTRFYGGNAIVGAGLPLAVGLALADAMKGRNRVTACFFGDGAV
                     AEGAFAES"
     gene            complement(496..>2317)
                     /gene="acsA"
                     /locus_tag="VFN38_10685"
     CDS             complement(496..>2317)
                     /gene="acsA"
                     /locus_tag="VFN38_10685"
                     /EC_number="6.2.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF003313.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="acetate--CoA ligase"
                     /protein_id="HET9012270.1"
                     /translation="MTTLAIEPRSHAVIEKARGGWRVEPNLADYETTRAGFTWAEAER
                     RVLDGLPGGAGLNIAHEAVDRHAAGPRAGHVALRWLGRGGARLDLTFADLRARTSRFA
                     NVLGTLGVGPDERVFALTGRIPELYVAALGALKHRNVFCPLFSAFGPEPIVARLGPGE
                     GRVLVTTPALYARKVAPVRERLPALRHVLLTGGGERFDPPAGTSDLRTLMDVAGDRFT
                     IPPTRPEDMALLHFTSGTTGKPKGAVHVHRAVLAHHVTGQLALDLHDDDVFWCTADPG
                     WVTGTSYGIVAPLSNGVTSVVDEADFDAERWYGILRDERVSVWYTAPTAVRMMMRAGA
                     ELARRYTLPALRFISSVGEPLNPEAVTWAQDAFGKPVLDTWWQTETGGIMIANYAAMD
                     IRPGSMGRPLPGVEAAIVRRGDDGRVAEVTEPLVQGELALRPGWPSMFRAYLNDEARY
                     RKCFADGWYLTGDLARRDADGYFWFVGRSDDVIKSSGHLIGPFEVESALMEHPAVAEA
                     GVIGKPDPVAGEVVKAFVSLKPGRAGDEPLRLDLLAFARTRLGAVVAPKEIAFVDAVP
                     KTRSGKIMRRLLKARELGLPEGDVSTLEGSATVGHGAGDG"
BASE COUNT          321 a          860 c          820 g          316 t
ORIGIN      
        1 gactcggcga aggcgccctc ggcgacggcg ccgtcgccga agaagcaggc cgtcacgcga
       61 ttgcgcccct tcatcgcgtc ggcgagcgcc agccccaccg ccagcgggag ccccgcgccc
      121 acgatggcgt tgccgccgta gaaccgcgtc acgacgtcga acaggtgcat ggagccgccg
      181 cgcccgcggc agcagccatt ttgcttgccg aacatttcag ccatgatgct gcccgccgag
      241 atgcccctca ccagcgcgtg cccgtgttcg cggtaggtcg ccacgacgtt gtcgtcaggc
      301 gtgagcgcct gcatcgcgcc gaccgccacc gcctcctcgc cgatgtagag gtggaggaag
      361 ccgcggatct tctcctgctg gtacagctcc gcgcaccgct cctccaggcg acggacgcgg
      421 agcatcgcgc gcagcagttc gaaaccgctg tcccgcaggc gcgccgcgtc ggggcgctca
      481 aggtcgcgcg gggcgtcagc catcgcccgc tccgtggccc accgtggcgc ttccctccag
      541 cgtcgagacg tcgccctcgg ggagcccgag ctcgcgcgcc ttgaggagcc gccgcatgat
      601 cttcccgctc cgcgtcttcg gcacggcgtc cacgaaggcg atctccttgg gcgccaccac
      661 cgcgccaagg cgcgtgcggg cgaaggcgag gaggtcgagg cgcagcggct cgtcgcccgc
      721 gcgtcccggc ttgagcgaca cgaacgcctt cacgacttcc cccgccaccg ggtcgggctt
      781 gccgatcacg ccggcctcgg ccaccgccgg gtgctccatc agcgcgctct cgacttcgaa
      841 cggcccgatg aggtgtccgg acgacttgat cacgtcgtcc gaccgcccga cgaaccagaa
      901 gtagccgtcg gcatcccgcc gggcgagatc gccggtgagg taccacccgt cggcgaagca
      961 cttccggtag cgcgcctcgt cgttcaggta ggcacggaac atcgagggcc agccgggccg
     1021 cagcgcgagc tcgccctgca cgaggggctc cgtcacctct gcgacccggc cgtcgtcgcc
     1081 gcgacgcacg atcgccgcct ccacgccggg cagcggacgt cccatcgatc cgggacggat
     1141 gtccatcgcc gcatagttgg cgatcatgat cccgccggtc tcggtctgcc accaggtgtc
     1201 gaggacgggc ttgccgaagg cgtcctgggc ccacgtcacc gcctcgggat tgagcggctc
     1261 gcccacgctc gagatgaagc gcagcgcggg cagggtgtag cggcgcgcca gctcggcgcc
     1321 ggcgcgcatc atcatccgga ccgcggtcgg cgcggtgtac cacaccgaca cgcgctcgtc
     1381 gcgcaggatg ccgtaccagc gctcggcgtc gaagtccgcc tcatccacga cgctggtgac
     1441 gccgttgctg agcggcgcga cgattccgta cgaggtgccg gtgacccagc cgggatcggc
     1501 ggtgcaccag aagacgtcgt cgtcgtggag gtccagcgcg agctgtccgg tgacgtggtg
     1561 cgccagcacc gcgcgatgca cgtgcacggc gcccttcggc ttgccggtgg tgccgctcgt
     1621 gaagtgcagg agcgccatgt cctctggccg cgtgggcggg atcgtgaagc ggtcgccggc
     1681 cacgtccatg agcgtgcgga ggtcgctggt gcccgcgggg gggtcgaagc gctccccgcc
     1741 ccccgtcagc agcacgtgcc gcagcgcggg aagccgctca cgcaccggcg ccaccttgcg
     1801 cgcgtacagg gccggcgtgg tgaccagcac gcgcccctcg ccggggccga gccgggcgac
     1861 gatgggctcg gggccgaacg cggagaagag gggacagaac acgttgcggt gcttgagggc
     1921 gccgagggcc gccacgtaca gctcggggat tcgcccggtg agggcgaaca cgcgctcgtc
     1981 cgggccgacg ccgagcgtgc cgagcacgtt ggcgaatcgg ctggtgcggg cgcggagatc
     2041 ggcaaaggtg aggtcgagcc gcgcgccgcc ccggccgagc cagcgcagcg cgacgtgccc
     2101 cgcgcgcgga ccggcggcat gccggtccac cgcttcgtgc gcgatgttca ggccggcgcc
     2161 tcccgggagg ccgtcgagca cccgccgctc cgcttccgcc caggtgaatc cggcgcgggt
     2221 cgtctcgtag tcggcgaggt tcggctccac ccgccatcca ccgcgcgcct tctcgatcac
     2281 cgcgtgcgat cgcggctcga tcgccagggt cgtcatc
//
LOCUS       DASSYW010000669         2126 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1694641, whole genome shotgun sequence.
ACCESSION   DASSYW010000669 DASSYW010000000
VERSION     DASSYW010000669.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2126)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2126)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2126
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1694641"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(13..1395)
                     /locus_tag="VFN38_10690"
     CDS             complement(13..1395)
                     /locus_tag="VFN38_10690"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HET9012271.1"
                     /translation="MRAVVAFLLIVFTALLSAQAPRQVSLIVHNGTVVTMDGTRRVIE
                     NGAVAVDGTDIVAVDTDAAIRKQFQSAETLDAGGQVIMPGLVNTHTHAPMVLFRGLAD
                     DLALQEWLTKYIFPAEGKLVSPEFVRIGTRLAALEMIESGTTTFVDMYYFEEEIAKET
                     KAAGLRGVLGQTVIQFPVADAKTPADGLMRAEAFINQFKGDALITPAVAPHAIYTLDG
                     PTLKAARELSKKHAVPMLIHLAETRDEIQTARERSSSTPVTYLDSLGVLGPGVLAAHG
                     VWVNDSDIAILKSRGVGVSHNPESNMKLASGTAPVTGYLRSGVALGLGTDGAASNNDL
                     DMFEAMRTASLLAKLQTSDPSVVPAATALDMATMGGARALGLAGQIGSIEPKKRADLI
                     VVSMRSARQTPLYDPISHLVYTTRGDDVRDTVVNGKIVMRDRKVLTLDAEAVLRDARA
                     MAARVRAAVK"
     gene            1465..2088
                     /gene="upp"
                     /locus_tag="VFN38_10695"
     CDS             1465..2088
                     /gene="upp"
                     /locus_tag="VFN38_10695"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: protein motif:HMM:NF001097.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004845 - uracil phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HET9012272.1"
                     /translation="MPFHLVDHPLAHDALAELRDTRTTPPAFRAAAHRISLIVAAEAL
                     RDLPTEADTVATPIGPADARIVRADVVIVPVLRAGLGMVESILELVPRARVGHIGLQR
                     DEETAAASRYYARLPPGLAASVVLLADPMLATGGSAVAAVDIIKSAGVRAIRMMCVVA
                     APEGVAAMTAAHPDVHIYSPALDASLNPKKFIVPGLGDFGDRLYGTV"
BASE COUNT          319 a          754 c          709 g          344 t
ORIGIN      
        1 atggcagact ccctatttga cggccgcccg gaccctcgcc gccatcgcac gcgcgtcccg
       61 caggacggct tcggcgtcga gcgtcagcac cttgcgatcg cgcatcacga tcttgccgtt
      121 cacgacggtg tcccggacgt cgtcgccccg cgtcgtgtag acgaggtgcg agatcggatc
      181 gtacagcggc gtctggcgcg cggaacgcat ggacaccacg atcagatccg cgcgcttctt
      241 cggttcaatc gacccgatct gccccgcgag tccgagcgcc cgcgccccgc ccatcgtggc
      301 catgtcgagc gccgtggccg cggggaccac gctgggatcg gacgtctgca gcttggccag
      361 cagggatgcc gtgcgcatcg cctcgaacat gtcgaggtcg ttgttgctgg ccgccccgtc
      421 ggtgccgagc ccgagcgcga cgcccgagcg caggtaacca gtgacgggcg ccgtgccgct
      481 cgccagcttc atgttgctct cggggttgtg cgacacgccg acgccgcgcg acttcaagat
      541 ggcgatgtcg gaatcgttca cccacacacc gtgcgccgcg agcacgccgg ggccaagcac
      601 gccgaggctg tcgagatacg tcaccggcgt gctgctggag cgctcgcgcg ccgtctgaat
      661 ctcgtcgcgc gtttccgcga ggtgaatgag catcggcacc gcgtgcttct tggacagctc
      721 gcgggccgcc ttcagggtgg gcccgtcgag cgtgtagatc gcgtggggcg ccacggccgg
      781 cgtgatgagc gcgtcgccct tgaactgatt gatgaacgcc tcggcgcgca tcagaccgtc
      841 ggccggcgtc ttggcgtcgg ccacgggaaa ctggatgacc gtttgaccga gcacgccgcg
      901 caggccggcg gccttggtct ctttcgcgat ctcttcctcg aagtagtaca tgtccacgaa
      961 ggtcgtggtg cccgactcga tcatctcgag cgccgccaga cgagtgccaa tgcgcacgaa
     1021 ctccggcgac acgagcttcc cttcggccgg gaagatgtac ttcgtcaacc actcctgcag
     1081 cgccaagtcg tcggcgaggc cccggaacag caccatcggc gcatgcgtgt gtgtgttcac
     1141 gaggccgggc atgatcacct gcccgccggc gtcgagcgtc tcggcgctct ggaactgctt
     1201 gcggatggcc gcgtcggtgt ccacggccac gatgtcggtg ccgtccaccg ccacggcgcc
     1261 gttctcgatc acgcggcgtg tgccgtccat cgtgaccacc gtgccgttgt gcacgatgag
     1321 ggagacctgc cgcggcgcct gggccgacag gagcgccgtg aacacgatca agaggaaggc
     1381 gacgaccgca cgcatcccgg aaattctatc gaagaacccc cgccggaggc ggggcaggca
     1441 gacactggta ctattgaccg cgccgtgcca tttcacctgg tcgaccaccc gctggcgcac
     1501 gatgccctgg ccgaactccg cgacacgcgc accacgccgc ccgcgtttcg cgccgctgcg
     1561 caccgaatca gcctgatcgt cgccgccgaa gcgctccggg atctccccac ggaggccgac
     1621 accgtggcca cgccgatcgg gccggccgac gcccgcatcg tccgcgccga cgtggtgatc
     1681 gtgccggtgc tcagggccgg cctcggcatg gtggagtcga ttctggagct ggtgccgcgc
     1741 gcccgcgtcg ggcacatcgg cctgcagcgc gacgaagaaa ccgccgcggc ctcgcgctac
     1801 tacgcgcggc tgcctccagg ccttgcggcc agcgtcgtcc tgctggcgga tccgatgctc
     1861 gccaccggcg gcagcgccgt ggcggcggtc gacatcatca agagcgccgg tgtccgcgcc
     1921 atccgcatga tgtgcgtggt ggcagcgccg gagggcgtgg ccgccatgac ggccgcgcac
     1981 cccgacgtgc acatctattc gccggcgctc gacgcctcgc tcaacccgaa gaagttcatc
     2041 gtccccggcc tgggcgactt cggcgatcgg ctgtacggca cggtctagcg gcttagggct
     2101 tagggcttaa gccggcctaa gactta
//
LOCUS       DASSYW010000670         2784 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_776758, whole genome shotgun sequence.
ACCESSION   DASSYW010000670 DASSYW010000000
VERSION     DASSYW010000670.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2784)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2784)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2784
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_776758"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1796)
                     /locus_tag="VFN38_10700"
     CDS             complement(<1..1796)
                     /locus_tag="VFN38_10700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl hydrolase"
                     /protein_id="HET9012273.1"
                     /translation="MSLTRRLAPLALVCALASISSAASAQVKPGAPLDSALLRAYRWR
                     NIGPDRGGRSIAVSGVRGRPKEAYFGATGGGLWKTTDAGETWAPVTDGKIGSASVGAV
                     AVSESNPDVVFIGTGETCIRGNIMPGDGVYRSGDAGKTWTHVGFRESQGISKIRIHPT
                     NPDIVFVAAFGKYSAPSTERGVFKSTDGGKTWRKVLYRDDRTAAIDISIDRTNPDVMY
                     AAMWEAYRTESHMSSGGPGSGLFKSTDGGEHWTEITRAPGMPAAGVIGRIGVAVSGGK
                     PNRVYALVEHEKGGLFRSDDAGATWTLVNEDRAIRQRAFYYTHVFADPRDSGTVYLQN
                     TSMFRSTNGGKATTAINANTHGDFHDLWIDPDDPKHLVVGNDGGGAVSVNGGGKWTTQ
                     DYPTEQFYHVVTTSHVPYHVCGSQQDNSTLCVPYDWNAAAFGLGAGGRRGGGGARADS
                     ATDITAGGMAVSYQVGGGEPGYIAPDPRDIDVFYAGTNNGGYVDRFDRRTGSSREVNP
                     YPWFYSGEPSSAIRERWQWTFPILFSPVDRKTLYVSSQRLWATTDGGQTWRALSGDLT
                     RHDPATMGPSGGPITGDMNGPEVYGTIFSVGPG"
     gene            2060..2467
                     /locus_tag="VFN38_10705"
     CDS             2060..2467
                     /locus_tag="VFN38_10705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012274.1"
                     /translation="MIHPSQRAAPRVLVVMADQWPRALLRAALRDVGYDAIGTRTLET
                     ALRLPDVDAARGPVRLIVVDQSALGDATGADLEAIVARHGAPPVLLLASATVEAPAGP
                     WRRVLRRPVSVADIVAAVESMFPLPATARRPLD"
     gene            complement(2473..>2784)
                     /locus_tag="VFN38_10710"
     CDS             complement(2473..>2784)
                     /locus_tag="VFN38_10710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012275.1"
                     /translation="AALPDVAGVDGAPHRGVAVWYAENWEDATGFSPYVYVGVDSASW
                     ARWRSAVSTFEFARGATGFPYVEYYDALGRVRGIEARKQRAVAFDVEPASKRRVLDAV
                     P"
BASE COUNT          387 a          948 c         1000 g          449 t
ORIGIN      
        1 cccggtccca cgctgaagat cgtgccgtac acctcggggc cgttcatgtc gccggtgatc
       61 ggcccgcccg agggacccat ggtggcggga tcgtggcggg tgaggtcgcc gctcagcgcg
      121 cgccaggtct ggccgccgtc cgtcgtggcc cagagccgct gcgaggagac gtagagcgtc
      181 tttcggtcga cgggcgagaa gaggatggga aaggtccact gccagcgctc cctgatcgcg
      241 ctcgacggct cgcccgagta gaaccagggg tacggattca cttcgcgcga gctgcccgtg
      301 cggcgatcga agcggtccac gtagccgccg ttgttcgtgc cggcgtagaa gacgtcgatg
      361 tcgcgcggat cgggggcgat gtagcccggc tcgccgccgc ccacctgata ggacacggcc
      421 atgccgcccg ccgtgatgtc ggtcgcgctg tcggcacgcg cgccgccgcc gccgcgccgg
      481 ccgccggcgc cgagtccgaa ggcggcggca ttccagtcgt acggcacgca gagggtgctg
      541 ttgtcctgct gcgatccgca gacgtgatac gggacgtggc ttgtcgtgac cacgtgatag
      601 aactgctcgg tcgggtaatc ctgggtcgtc cacttgccgc cgccgttcac cgacacggca
      661 ccgccgccgt cgttgccgac gacgaggtgc ttcgggtcgt ccggatcgat ccacaggtcg
      721 tggaagtcgc cgtgggtgtt ggcgttgatc gcagtggtcg ccttgccgcc gttcgtcgag
      781 cggaacatcg acgtattctg gagatagacc gtgccgctgt cgcgcggatc ggcgaagaca
      841 tgggtgtagt agaaggcgcg ctggcggatg gcgcggtctt cgttcacgag cgtccaggtg
      901 gcgccggcgt cgtcgctgcg gaacaggccg cccttctcgt gttcgacgag cgcgtagacg
      961 cggttcggct tcccgcccga cacggcgacg ccgatccgtc cgatgactcc ggcggcaggc
     1021 atcccggggg cgcgggtgat ttcagtccag tgctcgccgc cgtcggtgct cttgaacagg
     1081 ccgctccccg gcccgccgct cgacatgtgc gactcggtgc ggtaggcctc ccacatcgcg
     1141 gcgtacatga cgtcggggtt cgtgcggtcg atggagatgt cgatcgcggc ggtcctgtcg
     1201 tcgcgataga gcaccttccg ccacgtcttc ccaccgtccg tgctcttgaa caccccacgc
     1261 tcggtgctcg gcgcgctgta cttgccgaac gcggcgacga agacgatgtc tgggttggtg
     1321 gggtggatgc ggatcttcga gatcccctgc gactcgcgga agccgacgtg cgtccaggtc
     1381 ttgccggcgt cgccgctgcg gtagacgccg tcgccgggca tgatgttgcc gcggatgcag
     1441 gtctcgccgg tgccgatgaa gacgacgtcg ggattgctct cgctcaccgc gaccgcgccc
     1501 accgatgcgc tgccgatctt gccgtcggtc accggcgccc atgtctcgcc ggcgtcggtg
     1561 gtcttccaga gtcccccgcc cgtggcaccg aagtacgcct ccttcggccg gccgcgcacg
     1621 ccgctcacgg cgatggagcg tccgccgcgg tcggggccga tgttgcgcca gcggtaggcg
     1681 cgcaggaggg cggagtcgag tggagcgccg ggcttgacct gcgcggaagc tgccgacgag
     1741 atcgaagcga gtgcacagac gagcgcgagc ggggccaagc gacgagtcag cgacatgtgg
     1801 agatcgagga gaaggtcggt tcttcgggaa ctgcgactgc attttcagcg cggaggcacg
     1861 cagagggact gcaaccgcat catcacaggc tcctggttca ggcgagaagc gcgtccgagc
     1921 gggtgtcctc cgcgcacctc cgcgtcctct gcggtgaaca ggtcaacggt cgcacgcgtg
     1981 ccaccgaatg gcaacgcgca ccgccgacgt agtgctgaca ccctcggcat gggcatggaa
     2041 gatgacgtca ccggcagacg tgatccatcc ttcccagcgc gcggcaccgc gcgtcctcgt
     2101 cgtgatggcc gaccagtggc cgcgcgccct gctgcgtgcg gcactgcgcg atgttggcta
     2161 tgacgcgatc gggacgcgca cgctggagac ggcgctgcgg ctgccggacg tggacgcggc
     2221 ccgcgggccg gtgcggctga tcgtcgtcga ccagtcggcg ctcggcgatg cgaccggggc
     2281 ggatctggaa gcgatcgttg ctcgtcatgg agcgccaccc gtcctgctcc tcgcgagcgc
     2341 gacggtcgag gccccggccg gtccgtggcg acgcgtgctc cggcgtccgg tcagcgtggc
     2401 ggacatcgtc gcggccgtcg agtccatgtt tcccctgcca gccacggcgc ggcgtccgct
     2461 cgactgagcg cgctagggca ccgcgtcgag cacgcggcgc ttgctcgccg gctcgacgtc
     2521 gaaggcgacg gcgcgctgct tccgcgcctc gatgccgcgc acgcgaccga gcgcgtcgta
     2581 gtactcgacg tacggaaatc cggtcgcgcc gcgcgcgaac tcgaaggtgg agaccgcgct
     2641 gcgccagcgc gcccagctcg cgctgtcgac gccgacgtag acgtacggcg agaaccccgt
     2701 ggcgtcctcc cagttctcgg cataccacac ggccacgccg cggtgcggcg cgccgtccac
     2761 gcccgcgaca tccgggagcg ccgc
//
LOCUS       DASSYW010000671         2398 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1107390, whole genome shotgun sequence.
ACCESSION   DASSYW010000671 DASSYW010000000
VERSION     DASSYW010000671.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2398)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2398)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2398
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1107390"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2234)
                     /locus_tag="VFN38_10715"
     CDS             complement(<1..2234)
                     /locus_tag="VFN38_10715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012276.1"
                     /translation="MADDHDGPRKGHDDNRPEEARSGKETPAAPARQRRLHDIEGRCP
                     ADRDAVVLHWRTYWRSIQSVDDPDQLVSPIPVLARELRQLARLLHDRPMLGGCGNGHA
                     AAAPELEDALVAQLSQRAQHGVPVDLEDGRQVAGRRQAFSGLRLALGYRAPDLGGHLL
                     VQVCWISAVDLDIYHGATDTSSMATLTPSPPSSEDHHDAEALEALIEEARQRARRRRR
                     KYTAAALAAGLVGAYGLGNIGGDDTRSSDRGELAAAEAGAAAQITDGKWRVASGLEGG
                     EITTFAVDPKQPKTVFAATWEAGVFKSVDGGRRWRHMDVGSEVSHVDAIAIAPGDTQT
                     VYVGTGRGVYKTTNGGRSWERTSAGILGKETAAQRGYRPSGGYVSALIVDPRDADVAY
                     AGTRENGLFKTEDGGGSWRRVGPKSVRTLAFQPGRPDVVYATAARGVYRSRDGGATWQ
                     PAGLQSFYLAALAVDPKHPHTIYAGTYEEEEPDIVTGRIFKTTDGGASWRRTKGVRDV
                     IGAIAIDPHNTDVVYAEAGGNVVKTADGGRTWRSLGAGLTDGPALALDPRNPETIYRG
                     AAGVAKSVDGGRSWRRMNAGLTTARVPALAVAPGSRGRAYAAVHGRGVFKRVDGTWRL
                     ASTLPTDWFVDTVVNTVAVDPRHAANVYASTNGAFFRSANGGATWSESPLPALFGDRD
                     AVSALAVDPKNSRTVYALAVRDATTGDGLRQSYESLVMKSTDGGRTWPTRARVRAVDF
                     PAALA"
BASE COUNT          342 a          840 c          840 g          376 t
ORIGIN      
        1 gcgagggctg cagggaagtc caccgcgcgc acgcgcgcgc gcgtcggcca agtgcggccg
       61 ccgtccgtgc tcttcatgac gaggctctcg tagctctgcc gcaagccgtc tccggtagtc
      121 gcatcccgga ccgcgagcgc atagacggtc ctcgagttct tggggtcgac cgcgagcgcg
      181 gacacggcgt cgcggtcgcc gaacagcgcc ggcaggggag actcactcca ggtggcgccg
      241 ccgttcgcgc tgcggaagaa ggcaccgttc gtggaggcat acacgttcgc ggcgtgccgc
      301 ggatcgacgg cgacagtatt cacaacagtg tccacaaacc agtcggtggg caaggtgctc
      361 gcgagtcgcc acgtgccatc gaccctcttg aagaccccgc gcccgtggac tgctgcatac
      421 gcccgcccgc gactgccggg agcgaccgcc agcgccggca cgcgcgccgt tgtcagcccc
      481 gcattcatcc ggcgccagct gcgcccgccg tcgacgctct tcgccacacc ggcggcgccg
      541 cggtagatcg tttcagggtt ccgcgggtcg agcgccaggg ctgggccgtc tgttagcccg
      601 gcaccgaggg atcgccaggt gcggccgccg tccgcagtct tgacgacgtt gccccctgcc
      661 tcggcgtaaa cgacgtcagt gttgtgcgga tcgatggcga tcgcaccgat cacatcccgc
      721 acgcccttgg tgcggcgcca gctcgcgccg ccatcggtcg tcttgaagat gcgcccggtg
      781 acgatgtcgg gctcctcctc ctcgtacgtg cctgcgtaga tcgtgtgcgg gtgcttcggg
      841 tcgaccgcca gcgcggccag gtaaaaactt tgaagtccgg ccggctgcca cgtcgcgccg
      901 ccgtccctgc tccggtagac cccgcgcgcg gcggtcgcat agacgacgtc ggggcgcccg
      961 ggctggaatg ccagtgtgcg caccgacttc ggaccgacgc gacgccagct accgccgccg
     1021 tcctccgtct tgaacaagcc gttctcccgc gtgcccgcgt aggcaacgtc ggcatcgcgc
     1081 ggatcgacga tgagggcgga gacgtagccc ccgctagggc ggtacccacg ctgtgccgcc
     1141 gtctccttcc cgaggatgcc tgcgctcgtt cgctcccagc tgcggccgcc gttcgtcgtc
     1201 ttgtagacgc cgcgcccggt gccgacgtac accgtctgcg tgtctccagg cgcgatcgcg
     1261 atcgcgtcaa cgtggctcac ttccgagccg acgtccatat ggcgccatct gcgaccaccg
     1321 tcgacgctct tgaagacgcc ggcctcccac gtggcggcga agaccgtctt cggctgcttg
     1381 ggatcgacgg cgaacgtggt gatctctcca ccctcgaggc cggaggcgac tcgccacttg
     1441 ccgtccgtga tctgcgcggc ggcgccggcc tcggcggcag ccagctcgcc gcgatccgag
     1501 gagcgcgtgt cgtcgccgcc gatgttgccg aggccgtagg cgccgaccag gccggctgcg
     1561 agcgccgcgg ccgtgtactt gcgccgccgc ctgcgtgccc gctggcgcgc ctcctcgatt
     1621 agggcctcga gcgcctcggc atcgtggtga tcttcggagc tggggggcga tggcgtgagg
     1681 gtggccatgg agctagtatc agtagcacca tggtagatgt caagatcgac cgcggagatc
     1741 caacagacct gcacgagcag gtggccgccg agatccggcg cgcgatagcc gagggcgagg
     1801 cgaagcccgg agaacgcttg ccgccggccc gcgacctggc ggccgtcctc gaggtcaacc
     1861 ggaacaccgt gctgcgcgcg ctgagacaac tgcgcgacga gggcatcctc gagttccggc
     1921 gcggctgcgg cgtgaccgtt gccgcaaccc ccgagcatgg ggcggtcgtg gagcaggcgc
     1981 gcaagctggc ggagctcgcg cgcaagtacg ggtatcggag agacgagctg atccggatca
     2041 tcgacgctct ggattgagcg ccagtacgtg cgccagtgga ggactaccgc atcgcgatcg
     2101 gccgggcatc gaccttcgat gtcgtgaagc cgtcgctgac gagcaggcgc agccggagtt
     2161 tctttccccg accgagcttc ttcgggtcga ttgtcgtcgt ggcctttgcg gggcccatcg
     2221 tgatcgtccg ccacgctcgg cggtcgcgac gtgcgagcac gacgaccgag agcctgtcgc
     2281 gacggtcacg gtccgacgcc ttccatcgca cggtcagcgg cttcccggcg cgggcccgcc
     2341 gcggcaggcg caggaagcga gccgaggggg cgtgtggcga gcggcgcaga gtggcgag
//
LOCUS       DASSYW010000672         3181 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_242478, whole genome shotgun sequence.
ACCESSION   DASSYW010000672 DASSYW010000000
VERSION     DASSYW010000672.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3181)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3181)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3181
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_242478"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(257..640)
                     /locus_tag="VFN38_10720"
     CDS             complement(257..640)
                     /locus_tag="VFN38_10720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012277.1"
                     /translation="MSFRFPLDAVRELAERVEQLPPGESARRWVLRDDNQQHHHGVVR
                     LSESPLYVELWWKKDARGREQLVGLYRLHLAPLLERGYVRREREDAPGDDVRLRFHRG
                     DRGVVHIQAHDDGPALAVGTVDLAG"
     gene            complement(724..1671)
                     /locus_tag="VFN38_10725"
     CDS             complement(724..1671)
                     /locus_tag="VFN38_10725"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004084 - branched-chain-amino-acid
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0009081 - branched-chain amino acid
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid transaminase"
                     /protein_id="HET9012278.1"
                     /translation="MAKLTATGWIWRDGEFVAWQDATVHVLAHSMQFGSSAFEGVRCY
                     STPRGPAIFRLEDHLQRLINSCRIYRMDVPYGVDELVAACCELVDRNGLESCYIRPMV
                     LRGYGAAGMVPFDSPVEVFLPCWPWGAYLGEGALENGVDTCVSSWHRMAPNTVPSMAK
                     VAGNYLGGQLIKMEALANGFDEAIAMGPDGMISEGSGQNVFVVSKGILYTTPANGTLL
                     PGITRDSIITLARDAGLEVREQPLQREVLYTSDEIFLTGTASEVTPVRSVDRIKVGAG
                     RAGEVTKQLQRTFLDLVQGKGEDRHGWLTHVRAERASAK"
     gene            complement(1760..>3181)
                     /locus_tag="VFN38_10730"
     CDS             complement(1760..>3181)
                     /locus_tag="VFN38_10730"
                     /EC_number="3.4.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptidase"
                     /protein_id="HET9012279.1"
                     /translation="PSIGSSLRGLAYFEVTVQGSRGDLHSGTYGSAVMNPAMALARIL
                     ATMHDADTARAAEWVARSLRDAGLEAAVHPTAGHPVVVGEWRGAGPSAPTVLVYGHYD
                     VQPAEPLELWTSPPFEPTVRGGKLFARGSVDDKGQLFLHVKALEAHLNARGRLPLNVI
                     VLAEGEEEVGSEHLAPFIEANAARLKADAVVISDSAMFAPGLPSILSSLRGLAYFQID
                     VQGPAQDLHSGSYGGAVVNPAMALARILATLHDANGKIAIPGFHDDVRAWPEPVLSAM
                     RSLPFDDEHFRAEAGSPALGGEKGYTVLEQLWTRPTCEVNGLLGGYTGEGAKTVLPAK
                     AMAKVSCRLVPDQDPAKIEELMRAHVARVAPAGVTVTVTHLHGGRPWRADLHGPLFDA
                     ARRSLAAAFGREPVITGEGGSIPVVGDFQRILGAPVLLVGFGLPGENAHAPDEWMSME
                     NFTKGMRAIAMLWDELGSKPASR"
BASE COUNT          440 a         1211 c         1072 g          458 t
ORIGIN      
        1 gtggacgagc tgcacctgca cctgtatccg ttgacgctgg ggagcggcaa gcgggtgctg
       61 ccggagggcg tgcacgcaac tttcaacctg acgtccgcga caccgtatcc gagcggcgtg
      121 gtgggtctgc actacgcgcg gcagcggagc tgacggcgag caggggtcat cgctcgcgct
      181 gtcgcgccgc cggcgcgtca atcgccgccg gcgaacacgg gcgggtgatg cggcgggcgc
      241 agatggacgc ggtcgctcac cccgccagat ccaccgtccc caccgccagc gccggcccgt
      301 cgtcgtgcgc ctggatgtgc acgaccccgc ggtcgccgcg gtggaagcgc agtcgcacgt
      361 cgtcacccgg cgcatcctcg cgctcgcggc ggacgtagcc ccgctcgagc aggggggcga
      421 gatgcagccg gtacagtccc acgagctgct cccgcccccg cgcgtccttc ttccaccaca
      481 gctccacgta cagcgggctc tccgacagcc gcacgacgcc gtgatggtgc tgctggttgt
      541 cgtcccgcag cacccaccgc cgggcggatt cgcccggtgg cagctgctcc acacgctccg
      601 cgagctcgcg gacggcatcg agcgggaacc tgaacgacat cgcctgctcc ggttgctgtt
      661 ccgtcgggcc cgcggacgcg cgcgctgcct ggcgacgacc ggcgataccg cgcggcgacc
      721 gagctacttc gcgctcgccc gctcggcgcg cacgtgcgtc agccacccat gccgatcctc
      781 gcccttcccc tgcaccaggt cgaggaaggt gcgctggagc tgcttcgtca cttcgcccgc
      841 gcggcccgcg cccaccttga tccggtccac gctccgcacc ggcgtcacct cgctcgccgt
      901 gccggtgagg aagatctcgt cgctcgtgta cagcacctcg cgctgcagcg gctgctcgcg
      961 cacttccagc ccggcgtcgc gcgccagcgt gatgatgctg tcgcgcgtga tccccggcag
     1021 cagcgtgccg ttggccggcg tggtgtagag gatccccttc gacacgacga acacgttctg
     1081 tcccgagcct tcgctgatca tcccgtcggg acccatcgcg atggcctcgt cgaacccgtt
     1141 cgccagcgct tccatcttga tgagctgccc gcccaggtag ttgcccgcca ccttcgccat
     1201 gctcggcacg gtgttcggcg ccatgcggtg ccagctcgac acgcaggtgt ccaccccgtt
     1261 ctccagcgcc ccctcgccca ggtacgcgcc ccacggccag caggggagga acacctccac
     1321 cgggctgtcg aacggcacca tccccgccgc gccgtagccg cggagcacca tcgggcggat
     1381 gtagcaggac tcgagaccgt tccggtccac cagctcgcag cacgcggcca ccagctcgtc
     1441 cacgccgtag ggcacgtcca tccggtagat gcggcacgag ttgatcagcc gctggaggtg
     1501 atcctccagg cggaagatcg ccggtccgcg cggcgtggaa tagcagcgca ccccctcgaa
     1561 cgccgaggag ccgaactgca tcgaatgcgc gagaacgtgg accgtcgcgt cctgccaggc
     1621 gacgaattcg ccgtcgcgcc agatccagcc ggttgccgtg agcttggcca tcagtactcc
     1681 ctccaggagt gttaccaggc gaggtgcgtg ctgcgcgtac gggaaagtgc gggcggcagg
     1741 cgtcgggccc gccgccggtt cagcgcgatg cgggcttcga cccgagctcg tcccacagca
     1801 tggcgatcgc ccgcatcccc ttcgtgaagt tctccatgct catccactcg tccggcgcgt
     1861 gcgcgttctc gcccggcagc ccgaacccga ccaggagcac gggcgcgccg aggatgcgct
     1921 ggaagtcgcc gaccaccggg atggagcccc cctcgccggt gatcaccggc tcccgcccga
     1981 acgccgcggc cagcgaccgt cgcgcggcgt cgaacagggg gccgtgcagg tcggcgcgcc
     2041 aggggcggcc gccgtgcagg tgcgtcacgg tcaccgtcac ccccgcgggg gcgacgcgcg
     2101 cgacgtgtgc ccgcatcagc tcctcgatct tcgccggatc ctggtcgggg accagccggc
     2161 agctcacctt cgccatcgcc ttcgcgggga gcacggtctt cgccccctcg ccggtgtagc
     2221 cgcccagcag cccgttcacc tcgcacgtcg gccgcgtcca cagctgctcg agcacggtgt
     2281 accccttctc gcccccgagc gccggcgagc ccgcctcggc gcggaagtgc tcgtcgtcga
     2341 acggaaggct gcgcatggcg gagagcaccg gctccggcca ggcgcgcacg tcgtcgtgaa
     2401 agccgggaat cgcgatcttt ccgttcgcgt cgtgcagggt ggcgaggatc cgtgcgagcg
     2461 ccatcgccgg gttcaccacg gcgccgccgt agctgcccga gtgcaggtcc tgcgcgggcc
     2521 cctgcacgtc gatctggaag tacgcgagcc cgcgcagcga cgagaggatg ctcggcagcc
     2581 ccggcgcgaa catcgccgag tcggagatga cgacggcgtc ggccttcagg cgcgcggcat
     2641 tcgcttcgat gaagggcgcc aggtgctcgc tccccacctc ctcctcccct tcggccagca
     2701 cgatcacgtt caacgggagc cggccgcgcg cgttgaggtg cgcctccagc gccttcacgt
     2761 gcaggaagag ctgccccttg tcgtccaccg agccgcgcgc gaacagcttc ccgccgcgca
     2821 ccgtgggctc gaaggggggc gacgtccaca gctcgagggg ttcggccggc tgcacgtcgt
     2881 agtggccgta caccagcacc gtcggcgccg acgggcccgc gccgcgccac tcgccgacga
     2941 ccaccggatg tccggctgtc gggtgcaccg ccgcctcgag ccccgcatcg cgcagcgagc
     3001 gcgcgaccca ctcggccgcc cgcgcggtgt cggcgtcgtg catggtggcg aggatgcgcg
     3061 cgagcgccat cgccgggttc atcaccgcgc tgccgtaggt gccggagtgc aggtcgccgc
     3121 gcgacccctg caccgtgacc tcgaagtagg cgaggccgcg cagcgacgag ccgatgctcg
     3181 g
//
LOCUS       DASSYW010000673         3388 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1329571, whole genome shotgun sequence.
ACCESSION   DASSYW010000673 DASSYW010000000
VERSION     DASSYW010000673.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3388)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3388)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3388
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1329571"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..507
                     /locus_tag="VFN38_10735"
     CDS             <1..507
                     /locus_tag="VFN38_10735"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HET9012280.1"
                     /translation="AERAGVDGLPILHHIWQHRRRHWPGQDASDGADLVRLAERHPRV
                     SFILAHIGGGGDYQHTFAAVRDVPNVYLDLSGSGVDRGMLDDAYAAVGAKRLLWGADI
                     TLCTGLAKLWALEVIGLTSDEMADVRWRNAARIFPPGSLSVAPNESELLPQSRVAPSP
                     QSPVPSPQ"
     gene            513..1265
                     /locus_tag="VFN38_10740"
     CDS             513..1265
                     /locus_tag="VFN38_10740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012281.1"
                     /translation="MIDVNACIGPYPFRHLPHPEPDVLARVLEREGLEGAWVGHLPSA
                     FYRDPAPGNDELFAALAPFPQLRAAPCIRPDWPGWERALASVVDRGARAIRAYPPQWG
                     FGADDAALPALGAACGEAGMPLVLTARFEDLRQRHWMDQAGDLSAAAVRAVARGNRAT
                     RIVVCAAGRSLIEEVHWGLTPEERALVFWDISWIWGPPEDELALLLRTIGPSRFVYGT
                     AWPLRLAQTPRANLALLPDELADVALADPSRW"
     gene            1450..2094
                     /locus_tag="VFN38_10745"
     CDS             1450..2094
                     /locus_tag="VFN38_10745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c3 family protein"
                     /protein_id="HET9012282.1"
                     /translation="MTSRRKWALVPGFVALAGAVALLSAYSGASSSQNFAPVQPIAFP
                     HPMHVQTLGMNCIYCHYAANKSPDPGLPAVGTCLGCHNQFEVGPNRPKIDNTPARQST
                     EIKKLLDTYADASGKPKKAIEWVRIHKLPEYVHFPHMRHVNAGVACQSCHGQIQGMAR
                     VSQFASLNMGWCVNCHVNGYKPADAVTATGGTPTAQDLAAPPKKARYDCSGCHY"
     gene            2111..>3388
                     /locus_tag="VFN38_10750"
     CDS             2111..>3388
                     /locus_tag="VFN38_10750"
                     /inference="COORDINATES: protein motif:HMM:NF012602.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HET9012283.1"
                     /translation="MTQPSGSAGVRRRDFLKVLGAAGAATTAVGCSQERVEKLIPYLV
                     SPDDTVPGVSTYFATTCRECAAGCGLIAETRDGRTIKLEGNPAHPVNRGALCARGQAS
                     LQGLYNPDRYRTPMARRNGKLERITWDEGLKMLRDRIAGLGAGAANAVFVNQHETGSF
                     PAFLDQWLASYGMPAHIAYDGEAPHAVLQANRQVYGAAWPALDFAVAKLIVAVGADFL
                     DLWGASVPQQLSFADARAKLADAPRFVYIGPRRSLTGLNADEWIACKPGSELAIVNAL
                     AGKGSIDDAATAAGLDPAAKAALQRLIAELGSTKPSLVLSGVTTANALDVALAVNQLN
                     QAAGNVGVTIKPAEALVAFDRVGTPNELRDAVQRMASGAVPLAMFRGVNPVYVLPKSL
                     RAAEAIAKVAFKVSFSSYPDETTDLCDLVLPDSH"
BASE COUNT          513 a         1198 c         1110 g          567 t
ORIGIN      
        1 gccgagcggg ctggtgtgga cggtctgccg atcctccacc acatctggca gcatcgtcgt
       61 cgccactggc ccggccagga tgcgagcgac ggcgccgacc tcgttcgact cgccgagcga
      121 catccgcgtg tgagcttcat cctcgctcac atcggtgggg gaggggacta ccagcacacg
      181 ttcgccgccg tgcgcgacgt gccgaacgtg tacctcgatc tctcgggcag cggcgtcgat
      241 cgcggcatgc tcgacgacgc gtatgccgcg gtcggagcga aacggctgct ctggggtgcg
      301 gacatcacgc tgtgcaccgg actcgccaag ctctgggcgc tggaggtgat cggcctaacg
      361 agcgacgaga tggccgacgt ccggtggcgc aacgccgccc gcatcttccc tccgggttcg
      421 ctctcggtcg caccgaacga aagcgagctg ctgccgcagt ctcgagtagc gccgagtccc
      481 cagtccccgg tccccagtcc ccagtaggtc tcgtgatcga cgtcaacgcc tgcatcggtc
      541 cgtatccgtt tcgccacctg ccgcaccccg agcccgacgt gctcgcgcgt gtgctcgagc
      601 gcgagggcct ggagggcgcg tgggtcggac atctgccgtc ggccttctac cgtgacccgg
      661 cgccggggaa cgacgagctg ttcgcggcgc tcgcgccgtt cccgcagctc cgcgccgctc
      721 cctgcatccg tccggactgg cccggatggg agcgtgcgct cgcatcggta gtcgatcgcg
      781 gtgcgcgcgc gatccgcgcc tacccaccgc agtggggctt cggcgccgat gacgccgcct
      841 tgcccgcgtt aggcgcggcc tgcggcgagg ccgggatgcc actcgtgctc acggcccgct
      901 tcgaggatct gcgccagcgc cactggatgg atcaggcggg cgatctgagc gcggcggccg
      961 ttcgggcggt tgcgcgcggc aatcgcgcga cacgcatcgt cgtgtgtgct gccgggcgtt
     1021 cgctcatcga ggaagtgcat tggggcctca cgccggaaga gcgagcgctc gtgttctggg
     1081 acatctcgtg gatctggggc ccgccggagg acgagctggc cctgctgctc cgcaccatcg
     1141 ggccatcgcg gttcgtctac ggcaccgcgt ggccgctgcg cctcgcgcag acgcctcgcg
     1201 cgaatctcgc gctcctgcct gacgagttgg ccgacgtcgc gctggctgat ccgtcgcgct
     1261 ggtgacgcgc cccccgcatg gtgatccggt gctcgcaaac gtggctctga catcctcgca
     1321 ataaccttct gtatcggtgc ttgcgcgctt tcccaggggt cgtcatactt ccgccacttg
     1381 gcggggcctt gtgaagtatt tcacaaggcc gactgggtct cgctcgtatt ccaccctcgg
     1441 tcctcttcga tgaccagtag gcgaaagtgg gcgctcgttc cggggttcgt cgcactcgct
     1501 ggcgccgtcg ccctcctctc cgcatacagc ggcgcttcct cctcgcagaa cttcgcgccc
     1561 gtacagccga tcgcctttcc tcatcccatg cacgtgcaga ccctcgggat gaactgcatc
     1621 tactgtcact acgccgcgaa caagtcgcct gaccccggcc ttcccgccgt cggcacgtgc
     1681 ctcggatgtc acaatcagtt cgaggtcggt cccaaccgac cgaagatcga taacacgccc
     1741 gcgcgtcaga gcaccgagat caagaagctg ctcgacacct acgccgacgc gagcggaaag
     1801 cccaagaaag cgatcgagtg ggtccgcatc cacaagctgc ccgagtacgt gcacttcccg
     1861 cacatgcgtc acgtgaacgc cggtgtcgcc tgccagagct gccacggaca gatccagggc
     1921 atggcgcgcg tgtcgcagtt cgcgtcgctc aacatgggct ggtgcgtgaa ctgtcacgtc
     1981 aacggctaca agccggccga cgcagtgacg gccacgggtg gcactcctac cgcacaggac
     2041 ctcgccgcgc cgccgaagaa agcgcggtac gattgcagcg gctgccatta ctgatccgag
     2101 atctgatcac atgacccaac cctcggggtc tgcgggcgtt aggcgccgcg acttcctcaa
     2161 ggtcctgggc gccgcgggcg ccgccacgac cgctgttggt tgtagccagg agcgcgtcga
     2221 gaagctcatc ccgtatctcg tctcgcccga cgataccgtc ccgggcgtct cgacgtactt
     2281 cgccaccacc tgccgcgagt gcgccgccgg ctgcggactg atcgcggaaa cgcgcgacgg
     2341 tcgcaccatc aagctcgaag gcaatcctgc gcatcccgtc aatcgcggcg cgctctgcgc
     2401 gcgaggacag gcgtcgctcc agggcctgta caatccggat cgctatcgaa caccgatggc
     2461 gcgtcggaac ggaaagctcg agcgcatcac gtgggacgaa ggcctcaaga tgcttcgcga
     2521 tcgcatcgcc gggctcggcg ccggcgcggc gaacgcggtg ttcgtcaacc agcacgagac
     2581 gggcagcttc ccggcgttcc tcgatcagtg gctcgcgagc tacggcatgc ccgcgcacat
     2641 cgcgtacgac ggcgaagcgc cgcacgcggt gctgcaggcg aatcgtcagg tgtacggcgc
     2701 cgcgtggcct gcgctcgact tcgcggtcgc gaagttgatc gtcgcggtcg gcgcggattt
     2761 cctggatctg tggggcgcgt cggttccgca gcagctgtcg ttcgccgacg cgagagcgaa
     2821 gctcgcggac gcgccgcgct tcgtctacat cggaccgcgc cgctcgctca cgggcctcaa
     2881 cgccgacgag tggatcgctt gcaagccggg cagcgagctc gcgatcgtga acgcgctcgc
     2941 gggcaaaggc tcgatcgatg atgcggccac cgcggccggt ctcgatccgg cggccaaggc
     3001 cgcgctgcag cgcctcatcg cggagctcgg ttccacgaag ccgagcctcg tgctgtcggg
     3061 cgtgaccacc gcgaacgccc tcgacgtcgc gctggccgtg aaccagctca atcaggctgc
     3121 gggcaacgtc ggcgtcacca tcaagccggc cgaggcgctc gtcgccttcg accgggtcgg
     3181 cacgcctaac gagctccgcg acgccgtcca gcgcatggcg agcggcgccg ttccgctcgc
     3241 gatgttccgc ggcgtgaacc cggtgtacgt gctgcccaag tcgctgcgcg ccgcggaggc
     3301 gatcgcgaag gtggcgttca aggtcagctt ctcgagctat cccgacgaga cgaccgatct
     3361 ctgcgatctc gtgctgcccg atagccac
//
LOCUS       DASSYW010000674         2654 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1759921, whole genome shotgun sequence.
ACCESSION   DASSYW010000674 DASSYW010000000
VERSION     DASSYW010000674.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2654)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2654)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2654
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1759921"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..784)
                     /locus_tag="VFN38_10755"
     CDS             complement(<1..784)
                     /locus_tag="VFN38_10755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012284.1"
                     /translation="MPSDEAVSRVQRALEALGARRTGFRAAVETAYAQARGFLAEHGP
                     HSDERARETALELGAFAGGSVDPARFAALVTASRVLSPEEEGIVRRCAEVMDEVLAQG
                     DGLFVCDVPPGGDLRAAVETALAEAGRAFGAAMVFQAVKAGSYRAEQQATALRAFPFR
                     RWSRGERQLAPPLVVSVDGADLHGGALAEYLDGQQKIVVVARGPTSPAPLARLITPRC
                     YVAQLADGASPAPAGLAPVAAFDGPAVAALVPDSAARFVHDPG"
     gene            complement(774..1742)
                     /locus_tag="VFN38_10760"
     CDS             complement(774..1742)
                     /locus_tag="VFN38_10760"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HET9012285.1"
                     /translation="MSFTGELSCPLFAATADDDDGRDFALSDYEGATARWCPGCGDHS
                     ILTAVERLLVAEQLRPEQTVFVSGIGCSSRFPHYLKTYGFHGIHGRALPVATGIKLHR
                     PDLTVFVVMGDGDCTSIGAGHWVHAIRYNLKMVALLLDNAIYGLTKNQTSPTTPRGHP
                     SNTQPRGSWLPALDPISVALGVTNASFVAQTAEWVPAHLAATLRAAYHHDGLAFVRVL
                     QRCPVYTPDVYQRAVQRPDAIELLVHDDGVTVPELEKTYANRLTHDPRDLDRARSLAT
                     PGERVRLGVFYRDETRVRYDLLRRVAPKTVAERIALLDKELDKHAV"
     gene            complement(1739..>2654)
                     /locus_tag="VFN38_10765"
     CDS             complement(1739..>2654)
                     /locus_tag="VFN38_10765"
                     /inference="COORDINATES: protein motif:HMM:NF013974.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012286.1"
                     /translation="VVDVQRGGPSTGLPTKVEQSDLLAVLYGQPGDAPKVVLAPSTIE
                     ECFHVMVTARRIAEAFRCVVFVLSDANLATGVQPFPRPALDERWMRAGFDQDPLPVGT
                     KPYDWDEATGLSRRIIPGQANGMFTLTGLEHDARSKVAYSSGIHQHSSEMRSRKLAVL
                     QRALLPPAVVGADSGDLLVVGWGSTRGTIEEAVERARSEGLAVSSLHLTFLSPLQPGL
                     RAIFDRFRRVCTVELNYSDELGAPFITGENRRLGQLAWLLRAATLTDVDCWTRVPGEP
                     LRPGAVLEAIHSMLGRGGAAHSTPRGAA"
BASE COUNT          354 a          939 c         1021 g          340 t
ORIGIN      
        1 cgcccgggtc gtgcacgaag cgcgcggccg aatcggggac gagcgcggcg accgccgggc
       61 cgtcgaacgc cgccaccggc gcgagcccgg cgggtgcggg cgaggcgccg tccgccagct
      121 gcgcgacata gcaccgcggc gtgatcaggc gcgccagcgg cgccggcgac gtcgggccgc
      181 gggcgacgac gacgatcttc tgctggccgt cgagatactc ggcgagcgct ccgccgtgca
      241 ggtcggcgcc gtccaccgag acgacgagcg gtggcgcgag ctgtcgctcg ccgcggctcc
      301 agcgccggaa ggggaaggcg cgcagcgccg tggcctgctg ctcggcgcga tagcttcccg
      361 ccttcacggc ctggaagacc atggcggcgc cgaaggcgcg tcccgcctcg gcgagggccg
      421 tctccaccgc agcgcggagg tcgccgcccg gcggcacgtc gcagacgaac aggccgtccc
      481 cctgggcgag cacctcgtcc atcacctcgg cgcagcggcg gacgatcccc tcctcctccg
      541 ggctcaggac gcgcgacgcg gtgaccagcg cggcgaagcg cgccgggtcc acgctgccgc
      601 cggcgaacgc tccgagctcg agcgccgtct cgcgcgcccg ctcgtcggag tgcgggccgt
      661 gctcggccag aaagccgcgc gcctgcgcgt acgccgtctc taccgccgcg cggaatccgg
      721 tgcggcgcgc cccgagcgcc tcgagcgccc gctgcacccg cgacactgcc tcgtcagacg
      781 gcatgcttgt cgagctcctt gtcgagtagc gcgatccgct cggccaccgt cttcggggcg
      841 acgcgccgga gcaggtcgta gcgcacgcgg gtctcgtcgc ggtagaagac gccgagccgc
      901 acgcgctcgc ccggcgtggc gagggagcgc gcgcggtcca ggtcgcgcgg gtcgtgcgtc
      961 agccggttcg cgtacgtctt ctccagctcc ggcaccgtga cgccgtcgtc gtgcaccagc
     1021 agctcgatcg cgtccgggcg ctgcaccgcg cgctggtaga cgtcgggggt gtagaccggg
     1081 cagcgctgga ggacgcgcac gaaggcgagc ccgtcgtggt ggtaggccgc gcggagcgtc
     1141 gccgcgaggt gcgccggcac ccactccgcc gtctgcgcga cgaacgacgc gttcgtgacg
     1201 ccgagcgcga ccgagatcgg gtcgagcgcg ggaagccagc ttccgcgggg ctgggtgttg
     1261 ctcggatgcc cgcgcggcgt ggtgggcgac gtctggttct tcgtcagccc gtagatcgcg
     1321 ttgtcgagca gcagcgcgac catcttgagg ttgtagcgga tcgcgtgcac ccagtggccg
     1381 gcgccgatcg acgtgcagtc gccgtccccc atcacgacga acacagtgag gtcgggacgg
     1441 tgcagcttga tccccgtcgc caccgggagc gcgcggccgt ggatgccgtg gaagccgtag
     1501 gtcttgaggt agtgcgggaa gcggctggag cagccgatgc cggagacgaa caccgtctgc
     1561 tccggccgga gctgctcggc gacgagcagc cgctcgaccg cggtgaggat cgagtggtcg
     1621 ccgcagcccg ggcaccagcg tgcggtcgcg ccctcgtagt cggagagcgc gaagtcgcgc
     1681 ccgtcgtcgt cgtccgcggt ggcggcgaag agtgggcagg agagctcgcc ggtgaagctc
     1741 atgcggcacc tcgcggcgtg gagtgggcgg cgccaccgcg gccgagcatc gagtggatcg
     1801 cctcgaggac ggcgccgggg cggaggggct cgcccggcac gcgcgtccag cagtccacgt
     1861 cggtcagcgt cgcggcgcgc agcagccagg cgagctggcc gagccggcgg ttctcgccgg
     1921 tgatgaaggg cgcgccgagc tcgtcgctgt agttcagctc caccgtgcag acgcgccgga
     1981 agcggtcgaa gatcgcgcgc aggcccggct ggagcggcga gaggaaggtg aggtggagcg
     2041 acgacacggc gagcccttcg ctccgggcgc gctcgacagc ctcctcgatc gtcccccgcg
     2101 tgcttcccca cccgaccacg agcaggtcac cgctgtcggc gccgacgacg gccgggggga
     2161 ggagggcgcg ctggagcacg gcgagcttgc ggctgcgcat ctccgagctg tgctggtgga
     2221 tgcccgagct gtaggcgacc ttgctccgcg cgtcgtgctc cagtcccgtg agcgtgaaca
     2281 tcccgttcgc ctgacccgga atgatccgcc gcgacaggcc ggtcgcctcg tcccagtcgt
     2341 agggcttcgt ccccacgggc agcggatcct ggtcgaagcc ggcccgcatc cagcgctcgt
     2401 ccagcgccgg ccgggggaag ggctggacgc cggtggcgag gttcgcgtcg gagaggacga
     2461 agaccacgca gcggaacgcc tcggcgatgc gccgcgcggt gaccatgacg tggaagcact
     2521 cctcgatcgt ggacggggcg agcaccacct tcggcgcgtc gccgggctgg ccgtagagga
     2581 cggcgaggag gtcggactgc tcgaccttcg tcgggagccc ggtgctgggg cccccgcgct
     2641 gcacgtccac gacg
//
LOCUS       DASSYW010000675         2666 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1534222, whole genome shotgun sequence.
ACCESSION   DASSYW010000675 DASSYW010000000
VERSION     DASSYW010000675.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2666)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2666)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2666
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1534222"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            169..804
                     /locus_tag="VFN38_10770"
     CDS             169..804
                     /locus_tag="VFN38_10770"
                     /EC_number="5.4.99.61"
                     /inference="COORDINATES: protein motif:HMM:NF006136.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016993 - precorrin-8X methylmutase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="precorrin-8X methylmutase"
                     /protein_id="HET9012287.1"
                     /translation="MPERIDYIRDGARIYERSFAIIRTEADLARFSSEEADIVVRMIH
                     ACGCVEVAGHVAFGAGLVGAGREALARGAPILCDSEMVAHGITRARLPARNDVVCTLH
                     DARVAVLAQKLGTTRSAAALDLWQDRLGGAVVAIGNAPTALFRLLEMLDAGAPKPAAL
                     LGIPVGFVGAAESKDALAADSRGVPFLTVRGRMGGSAMTAAAVNALAKAGT"
     gene            801..1532
                     /locus_tag="VFN38_10775"
     CDS             801..1532
                     /locus_tag="VFN38_10775"
                     /EC_number="2.1.1.130"
                     /inference="COORDINATES: protein motif:HMM:TIGR01467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030788 - precorrin-2
                     C20-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="precorrin-2 C(20)-methyltransferase"
                     /protein_id="HET9012288.1"
                     /translation="MSAAGKLVGVGVGPGDPELITLKAVRVLERADVVVHFAKSGATG
                     NARAIAQRYLRPGIRELPLTFPVTTELPKDEAAYCDLMRTFYDAAAGEVAAHLDDGRV
                     VAVVCEGDPLFYGSYMHLHVRLAGRFHTEVIAGVSGMSGCWSAIGTPVAQGDDVFTVL
                     PGTLAQDELERRLAEADAVVVMKLGRNLPKVRRALERTGRLTRAVYVERGTMTGEKAI
                     PLADKPDDCAPYFAIVLVPGWERRP"
     gene            1529..2293
                     /locus_tag="VFN38_10780"
     CDS             1529..2293
                     /locus_tag="VFN38_10780"
                     /EC_number="2.1.1.131"
                     /inference="COORDINATES: protein motif:HMM:NF004648.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="precorrin-3B C(17)-methyltransferase"
                     /protein_id="HET9012289.1"
                     /translation="MTGRLAVIGLGPGDARWLTPEAAAVLAAADALFGYGPYLDRAPV
                     RAGQRRHASDNREEGARARAALASAAAGANAALVSGGDPGVFAMAAAVCEQVEQGPPA
                     WRTLELAIVPGITAMLAVAARVGAPLGHDFCALSLSDNLKPWTEIERRLDAAAQAGFV
                     IALYNPISQARPWQLATAFERLRGHLPATTPTVFGRAVGRADESIVVTTLAAADPACA
                     DMATLVIVGSAETRVVPRPGHAPLVYTPRSIGSARA"
     gene            complement(2257..>2666)
                     /locus_tag="VFN38_10785"
     CDS             complement(2257..>2666)
                     /locus_tag="VFN38_10785"
                     /EC_number="1.3.1.106"
                     /inference="COORDINATES: protein motif:HMM:NF014613.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016994 - precorrin-6A reductase activity
                     [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="precorrin-6A/cobalt-precorrin-6A reductase"
                     /protein_id="HET9012290.1"
                     /translation="AVQALGPSPRRVFLALGRNDIGCFAQAPQHFYLVRSVDPVHPPL
                     AVSRASYVTGRGPFTEADDRALLRAHAIDIVVAKNSGGTATYGKMAAARALGLAVILL
                     RRPALPETPAVETVEDAVTWLDHARALPIERGV"
BASE COUNT          362 a          928 c          958 g          418 t
ORIGIN      
        1 cccgcgatca accgctggcg ctgctcgtgc ctggggcgtt gccgggcgcg ctcgcgcgac
       61 tggcggagac ggtgggtcgg ctgcgcgtcg gcgacgaaag cgccgccgaa gtgctgtcgc
      121 acctcgaccg cgcgcagatc gtgcgtctga tccacggcga ggcggcgggt gcctgagcgg
      181 atcgactata tccgtgatgg cgcccgcatc tacgagcgtt cgttcgccat cattcgcacg
      241 gaggccgatc tcgcacgctt ttcgagcgag gaagccgaca tcgtcgtgcg catgattcat
      301 gcctgcgggt gcgtcgaggt ggctggccat gtcgcgttcg gcgccggact cgtcggcgcc
      361 gggcgggagg cgcttgcgcg cggtgcgccg atcctgtgcg actccgagat ggtcgcgcac
      421 ggcatcaccc gcgcacggct gccggcgcgc aacgacgtgg tctgcacgtt gcacgatgcg
      481 cgtgtcgccg tgctcgcaca gaaactgggc acgactcggt ccgcggccgc gcttgatctg
      541 tggcaggatc gcctcggcgg cgcggtggtg gcgatcggca atgcgccgac ggcgctgttc
      601 cgattgcttg agatgctcga cgccggcgcg ccaaagccgg cggcgctgct cggcatcccg
      661 gtgggattcg tcggcgccgc cgaatccaag gacgcgctcg cggccgactc gcgtggcgtg
      721 cccttcctta cggtgcgcgg gcgcatgggc ggcagcgcca tgaccgcagc cgccgtcaac
      781 gcgctggcaa aggccggaac atgagtgccg ccggcaagct cgtcggtgtc ggcgtggggc
      841 ccggcgatcc cgagctgatc acgctcaagg ctgtgcgcgt gctggagcga gccgacgtcg
      901 tcgtccattt tgccaagtcc ggcgcgactg gaaacgcccg cgccatcgcc cagcgctatc
      961 tgcgccccgg cattcgcgaa ctgccgctca cctttcccgt gacgaccgag ctgccgaagg
     1021 acgaagcagc ctattgcgac ctgatgcgga cgttttacga cgccgcggcg ggcgaagtgg
     1081 ctgcccatct cgacgacggc cgcgtggtcg ccgtggtctg cgagggcgac ccgctgttct
     1141 acggctccta tatgcatctg catgtccgcc tggcaggccg gttccacacc gaggtgattg
     1201 ccggcgtgag cgggatgtcc ggatgctggt cggcgatcgg cacgccggtc gcccagggcg
     1261 acgacgtgtt taccgtgctc cccggcacgc tggcgcaaga cgagctggag cgccgcctgg
     1321 ccgaggcgga cgcggtggtg gtgatgaagc tcggacgcaa tctgcccaag gtgcgccgcg
     1381 ccctcgagcg gaccggccgg ctcacgcgcg ccgtctatgt cgagcgcggc acgatgacgg
     1441 gcgaaaaggc aatcccgctc gccgacaagc cggatgactg cgcgccttat ttcgccattg
     1501 tcctcgtgcc cggctgggag cggcggccgt gaccggccgg ctggccgtga tcgggctcgg
     1561 tcccggagat gcccgttggc tcactccgga ggccgcagcc gtgttggccg ccgccgatgc
     1621 gctgttcggt tacgggcctt atctcgatcg cgcgcccgtg cgggcgggac agcgccgcca
     1681 cgcctccgat aatcgggagg aaggcgcgcg ggcgcgtgcc gcgctcgcat ccgcggccgc
     1741 aggcgccaat gcggccctgg tctccggcgg cgaccccggc gtgttcgcca tggcggcggc
     1801 agtgtgcgag caggtcgaac agggtccccc tgcctggcgc acgctcgaac tcgcgatcgt
     1861 cccgggcatc acggcgatgc tggcggtggc cgcacgggtc ggcgcccccc tcggccatga
     1921 cttctgcgcg ctgtcgctct ccgacaatct gaagccctgg acggagatcg agcgccgcct
     1981 ggatgcggcg gcgcaggccg gcttcgtcat cgcgctctac aatccgatct cgcaggcgcg
     2041 gccatggcag ctcgccaccg ccttcgagcg cctgcggggt caccttcccg cgaccacacc
     2101 gaccgtattc ggccgcgccg tcggtcgagc ggacgagagc atcgtggtca cgaccctcgc
     2161 agctgccgat ccggcatgcg cggatatggc gaccctcgtc atcgtcggtt cggcggagac
     2221 gcgcgtcgtg ccccggccgg gccacgcgcc gctggtctac accccccgtt cgatcgggag
     2281 cgcgcgcgca tgatcgagcc aggtcacggc gtcctcgacg gtctcgacgg ccggcgtctc
     2341 cggcaaggca ggacggcgca gcaggatcac cgcgaggccg agcgcgcgcg ccgccgccat
     2401 cttgccgtag gtcgcggtcc cgccgctgtt cttggcgacg acgatgtcga tcgcatgcgc
     2461 acgcaacaat gcgcgatcat cggcttcggt gaatggcccg cgaccggtga cgtaggatgc
     2521 acgcgacacc gccagcggcg gatggaccgg gtcgacgctg cgcacgagat agaagtgttg
     2581 cggtgcctgt gcgaaacatc cgatgtcgtt cctgccgagc gcgaggaaca cccggcgcgg
     2641 cgatgggccg agcgcttgca ccgccg
//
LOCUS       DASSYW010000676         3518 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_993044, whole genome shotgun sequence.
ACCESSION   DASSYW010000676 DASSYW010000000
VERSION     DASSYW010000676.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3518)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3518)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3518
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_993044"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..530
                     /locus_tag="VFN38_10790"
     CDS             <1..530
                     /locus_tag="VFN38_10790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TIM barrel protein"
                     /protein_id="HET9012291.1"
                     /translation="ERMIPRAAAAGVPNIVCFSGNRGGMSDGEGIANCIAGFRRLVPT
                     AERHGVTLCLELLNSKVDHADYHADHTAWGVEVVRGVGSPRVKLLYDIYHMQIMEGDV
                     IATIRANVQHIAHFHTGGVPGRHEIDDSQELNYRRVMQAIADLGFAGYVAQEFVPARE
                     PALASLRQAYEICDV"
     gene            complement(768..1754)
                     /locus_tag="VFN38_10795"
     CDS             complement(768..1754)
                     /locus_tag="VFN38_10795"
                     /inference="COORDINATES: protein motif:HMM:NF013200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit
                     alpha/FixB family protein"
                     /protein_id="HET9012292.1"
                     /translation="MANVLVFAETRNGELRKIALEAVTAGRKLADASGGGEVHALVAG
                     PAGVGAHAAKLATYGADAVIVVESADYAQFARESLAATLADRAKAGGYRAVVLGFSAQ
                     GRDLGPRVAARLDAPIASDVTELAVSGDTITVKHPGYANKVIMTLTLSGSPVVLSVRP
                     SAFTAAESPKAGRVEQGQPSAAPGATVTVTEVKEGAKGRPDLGEASIIISGGRGLKAK
                     ENFKLIEDLADAFGNAAVGATRAVTDDGWRPHADQIGQTGRQVSPQLYVAVGISGAIQ
                     HLAGMRTSKTIVAINKDKDAPIFKVADYGIVGDVLEVVPALTAAVREARKGH"
     gene            complement(1754..2503)
                     /locus_tag="VFN38_10800"
     CDS             complement(1754..2503)
                     /locus_tag="VFN38_10800"
                     /inference="COORDINATES: protein motif:HMM:NF013200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HET9012293.1"
                     /translation="MKIAVCIKRTPDSESRFRIAGSGTAIDETGLKFDMDDFAGYAVE
                     AALQLNEKAGGGETVVYAVGPDNVQESLRKAMSMGAERAVHLKADSVADGIAIARALA
                     AELKAGGYDLVLFGKHAFDSSAGVVGTATAELLGVPCVTAASQLSVDGTKGTARRELE
                     GAAEMVEFPLPAVVTIDEGVARPRYPSLKGIRAAKKKPLESKPAQLGTVRVTVSKMEL
                     PPERPAGRIVGEGSAAVPELVRLLQNEAKVI"
     gene            complement(2703..2924)
                     /locus_tag="VFN38_10805"
     CDS             complement(2703..2924)
                     /locus_tag="VFN38_10805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012294.1"
                     /translation="MDKHGHETEQEEMERTMALGEAHSGAPGGARQNVRRDTEQGAVS
                     RPGGAAQNSGGALGSNADEMGDGPGRGAD"
     gene            complement(3035..>3518)
                     /locus_tag="VFN38_10810"
     CDS             complement(3035..>3518)
                     /locus_tag="VFN38_10810"
                     /inference="COORDINATES: protein motif:HMM:NF012241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HET9012295.1"
                     /translation="PLGLDPFALLSPSLGYALAAPEPDAAERTSATSAPARQLATRAR
                     GGAMAPSGSWMPQVEVTTRNDALVVRADLPGVKREDVRIDLDDDRLTLSGSRHQESEE
                     RGEGFYHSERSYGSFSRVIPLPKGIDADACQAKYQDGVLEITIPMPARASGAKRIEIR
                     "
BASE COUNT          456 a         1338 c         1198 g          526 t
ORIGIN      
        1 ccgaacgcat gattccgcgc gccgccgcgg cgggggtacc gaacatcgtc tgcttcagcg
       61 gcaaccgggg cggcatgtcg gacggcgagg ggatcgccaa ctgcatcgcc gggttcaggc
      121 gcctcgtgcc cacggcggag cgccatggcg tgacgctctg cctcgagctg ctcaacagca
      181 aggtggacca cgccgactac cacgccgacc acacggcgtg gggcgtggag gtggtgaggg
      241 gagtggggtc gccgcgcgtg aagctgctgt acgacatcta ccacatgcag atcatggagg
      301 gcgacgtcat cgccacgatc cgcgcgaacg tccagcacat cgcccacttc cacaccggcg
      361 gcgtgcccgg ccggcacgag atcgacgaca gccaggagct caactaccgg cgcgtcatgc
      421 aggccatcgc cgacctgggc ttcgccggct acgtggcgca ggagttcgtg ccggcccgcg
      481 agccggcgct cgcgtcgttg cggcaggcgt acgagatctg cgacgtctag ggcaagggcg
      541 tacgacggcg ttcgacggcg ttggaacggc gcggcgcggg ttggtaaaag gtacagggta
      601 cagggtacgc ggtaccgggt atggcgggac cgccaccctt caacgcgtcg ctcgttcgcg
      661 aggagcgttg cggaggagta cccggtacct ggtaccctgt accgcgtacc ctgtacgaac
      721 ctccgccgcg ccgttcaaac ccgcaacgcc gttctaccgc cccccgctca gtgccccttg
      781 cgggcctcgc gcaccgcggc cgtgagcgcc ggcaccacct cgagcacgtc gccgacgatc
      841 ccatagtcgg ccaccttgaa gatcggagcg tccttgtcct tgttgatcgc gacgatcgtc
      901 ttcgacgtgc gcatgccggc gaggtgctgg atcgccccgc tgatgccgac cgcgacgtag
      961 agctgcgggc tcacctgccg ccccgtctgg ccgatctggt cggcgtgcgg gcgccatccg
     1021 tcgtcggtga cggcgcgcgt cgcgcccacc gccgcgttgc cgaaggcgtc ggcgagatcc
     1081 tcgatcagct tgaagttctc cttcgccttg agcccgcggc cgccggagat gatgatcgac
     1141 gcttcgccga ggtcgggacg ccccttcgcg ccctccttca cctcggtcac cgtcaccgtc
     1201 gcgccgggcg cggccgacgg ctgcccctgc tccaccctgc ccgccttcgg cgactccgcc
     1261 gccgtgaagg cgctcggccg gacgctcagc accaccggcg agccggagag ggtgagcgtc
     1321 atgatcacct tgttcgcgta gccgggatgc ttcaccgtga tcgtgtcgcc gctcacggcc
     1381 agctccgtca cgtcgctcgc gatgggcgcg tcgagccgcg ccgccacgcg ggggccgagg
     1441 tcgcgcccct gcgccgagaa gccgagcacg acggcgcgat agccgcccgc cttcgcgcgg
     1501 tcggccagcg tggccgccag cgactcgcgc gcgaactgcg cgtagtccgc gctctccacg
     1561 acgatcaccg cgtcggcgcc gtacgtcgcc agcttcgccg cgtgcgcgcc gacccccgcg
     1621 gggccggcca ccagggcgtg cacctcgccg cccccgctcg cgtcggcgag cttgcggccc
     1681 gccgtcaccg cctcgagcgc gatcttccgc agctcgccgt ttcgcgtctc cgcgaacacc
     1741 aggacgttcg ccatcagatc accttcgcct cgttctggag aagccgcacc agctccggca
     1801 ccgccgccga tccctcgccc acgatgcgcc ccgcggggcg ctcgggaggc agctccatct
     1861 tggacaccgt gacgcgcacc gtgccgagct gcgcgggctt cgactccagc ggcttcttct
     1921 tcgccgccct gatccccttg agcgacggat agcgcggccg ggccacgccc tcgtcgatcg
     1981 tcaccaccgc gggcaggggg aactccacca tctcggccgc gccttcgagc tcgcggcggg
     2041 cggtgccctt ggtgccgtcc acgctcagct gcgacgcggc ggtcacgcag gggacgccga
     2101 gcagctcggc ggtggccgtg ccgaccacgc cggcggagct gtcgaacgcg tgcttgccga
     2161 acagcacgag gtcgtagcct cccgccttga gctcggccgc gagcgcgcgc gcgatggcga
     2221 tgccgtcggc cacgctgtcg gccttgagat gcacggcgcg ctcggcgccc atgctcatcg
     2281 ccttgcgcag cgactcctgg acgttgtcgg gccccacggc gtagacgacg gtctcgccgc
     2341 cgcccgcctt ctcgttgagc tggagcgccg cttccacggc gtagccggcg aagtcgtcca
     2401 tgtcgaactt cagcccggtc tcgtcgatcg ccgtgccgga gccagcgatc ctgaagcgcg
     2461 actcggagtc gggagtgcgc ttgatgcaga cggcaatttt caccgccggt cccccatgtg
     2521 aaaagattca catgaattgt agacgcgagg ccggatgccc ggaagcccgg acgcgcgaaa
     2581 gctccatcgc gcgggctcgc tgtcgggaga agccccgacg caccgagggc cggacgcgcg
     2641 aaggcccggg tgtggctgca cccgggcctc cggaccgccg cgacatcccc ccgcggcagt
     2701 ggtcaatccg cgccccgacc agggccgtcg cccatctcgt cggcgttgct gccgagcgct
     2761 ccgccggagt tctgcgccgc gccgcccggc cgcgacaccg ccccctgctc cgtgtcgcgc
     2821 cgcacgttct gccgcgcgcc gccgggcgcg ccgctgtgcg cctcgcccag cgccatggtg
     2881 cgctccatct cctcctgctc cgtctcgtgg ccgtgcttgt ccatcgtgtc ccccgtctgg
     2941 agtcacacga atgaagtggc aaggccgatg ccgggcgcgc gcggccgcgg gcgcggcggc
     3001 ggagccggcc gggtgaccgc cggctccgcg cgccctagcg gatctcgatg cgcttcgcgc
     3061 cgctcgcccg cgccggcatc gggatggtga tttccagcac accgtcctgg tacttcgcct
     3121 ggcaggcgtc ggcgtcgatc cccttgggca gcgggatcac gcgcgagaag ctgccgtagc
     3181 tccgctcgga gtgatagaac ccctcgccgc gctcctcgct ctcctgatgg cgcgagccgc
     3241 tcagcgtgag ccggtcgtcg tccagatcga tccgcacgtc ctcccgcttc acccccggca
     3301 ggtcggcgcg cacgacgagg gcgtcgttcc gggtggtcac ctccacctgg ggcatccagc
     3361 tcccgctggg cgccatcgcg ccccctcgcg cgcgcgtcgc cagctggcgg gccggcgcgc
     3421 tggtggcgga cgtccgctcg gccgcgtcgg gctccggcgc ggcgagcgcg tagccgaggc
     3481 tcgggctcag cagcgcgaac ggatcgagtc cgagcggc
//
LOCUS       DASSYW010000677         2858 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_360001, whole genome shotgun sequence.
ACCESSION   DASSYW010000677 DASSYW010000000
VERSION     DASSYW010000677.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2858)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2858)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2858
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_360001"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..852
                     /locus_tag="VFN38_10815"
     CDS             <1..852
                     /locus_tag="VFN38_10815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012296.1"
                     /translation="TQSMQAGVNYQALYRVGYVVSLLRGDSAGMARYLEAARKTRDVL
                     DYANWEARTSAFRGRLATSREEVQAATQQALQLGFKEWAGRYSTEDAEIHAILGRCTQ
                     ARRSAKAALDWSRDSATLDIGARALGWCGDPQALELTRELAQRFPDASLRLHVSAPIA
                     TAAYMVRAGNLTGALTELDKVKPFEGATMAKLWPAYLRGQIYLARKEPTRAAPEFQHV
                     IDHRSESSDSLLYPMSLLGRARAASAAGERSTAEQYYGQLFEIWRDADKDLEPLVEAT
                     REALLLH"
     gene            complement(849..1391)
                     /locus_tag="VFN38_10820"
     CDS             complement(849..1391)
                     /locus_tag="VFN38_10820"
                     /inference="COORDINATES: protein motif:HMM:NF019265.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECF-type sigma factor"
                     /protein_id="HET9012297.1"
                     /translation="MPKPADPQASQLFPLVYGELRKVARNYLGRERAQHTLQPTALVN
                     EAWLRLRDQRRVDWQGRTHVLAVGAQAMRRVLIDHGRGRRRQKRGGGEAHVTLHTWLN
                     AVNNEPVDMEDALALDAALHKLAEVDARQASIVEMRYFGGLTVPEVAEALGVSVRTVE
                     GEWTHAKAWLKRELSRQVAD"
     gene            1513..>2858
                     /locus_tag="VFN38_10825"
     CDS             1513..>2858
                     /locus_tag="VFN38_10825"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HET9012298.1"
                     /translation="MTLGLRLYAAFVLLLVTGASAFAADTGSVSGAVFSQTGAPVAGA
                     TVKISGAALPIGRETQTDANGVYRFDYLLPGEYAVEVVAEGVAPVRRGAVVAVGKDTQ
                     VEMLLGVTVSESVTVNAVTPVVDVRSSDASLTVTDEKFNALPIEHSYRGLFQLAPGVP
                     DNRSQVGLSAGGSRQDNTYLLDGANITSPGFGTLAIQVNQLDIAEVNLTRAGITAEFG
                     RTAGTVANAVSRSGSNRFTGLGRIDWLSESLVSRYTLPDDVEAAGVRPGTFRDGLLTS
                     QAEPAVGVGGPLVRDLIFFYGSARYQHDTKWGRINKADVELPDEVRKGPEFFGKITAS
                     LSASHQLTASHRHHPIDVDYNGLTSDFAPSAATVGNRGSRVTAFDWAWFQGPHRSLSV
                     RYQRTQEFNEDVPVTVLPDLPPFDPSRLTAMGQYTDPAQANLITGAREFTNVQNYRR"
BASE COUNT          445 a         1005 c          990 g          418 t
ORIGIN      
        1 acgcagtcga tgcaggcggg cgtgaactat caggcgctct accgcgtcgg gtatgtcgtg
       61 tccttactgc gcggcgactc ggcggggatg gcccgctacc tcgaggccgc gcgcaagacg
      121 cgcgacgtgc tggactacgc caactgggag gcgcgaacat ccgcgttccg cgggcgcctg
      181 gccacgagcc gcgaagaagt gcaggcggcg acgcagcagg cgctgcagct gggtttcaag
      241 gagtgggcgg ggcgctactc gaccgaggac gccgagatcc acgcgatcct cggccgctgc
      301 acgcaggcgc ggcgatcggc gaaggccgcg ctcgactgga gccgcgacag cgccacgctc
      361 gacatcggcg cgcgggccct cgggtggtgc ggcgacccgc aggcgctcga gctcacgcgt
      421 gaactggcgc agcgctttcc cgacgccagc ctgcgcctgc atgtctcggc gccgatcgcc
      481 accgcggcgt acatggtgcg cgcggggaac ctgaccggcg cgctgaccga gctcgacaag
      541 gtcaagccgt tcgagggcgc cacgatggcc aagctgtggc cggcgtatct gcgcgggcag
      601 atctacctgg cgcgcaagga gccgacgcgg gcggccccgg agttccagca cgtcatcgac
      661 caccggtccg agtcgtcaga ctcgctgctc tatccgatgt cgctgctcgg gcgcgcacgc
      721 gcagcgtcgg ccgccggcga acgctcgacc gccgagcagt attacggaca gctgttcgag
      781 atatggcgcg atgcggacaa ggatctcgaa ccgctggtcg aggcgacccg cgaggcgcta
      841 ttgctgcatt agtccgccac ttggcgggag agctcgcgtt tgagccacgc cttggcgtgg
      901 gtccactccc cttcgaccgt ccgtaccgat acgccgagcg cctcggcgac ttccggcacc
      961 gtcagcccgc cgaagtagcg catctcgacg atcgacgcct gacgcgcgtc gacctccgcc
     1021 agcttgtgca gcgcggcgtc gagcgcgagc gcgtcttcca tgtccaccgg ctcgttgttc
     1081 acggcgttga gccaggtgtg cagcgtgacg tgcgcctcgc cgcctccccg cttctggcgc
     1141 cggcggccgc ggccgtgatc gatgagcacg cggcgcatcg cctgcgcgcc gaccgcgagc
     1201 acgtgggtcc tgccctgcca gtccacgcgg cgctggtcgc gcaggcgcag ccacgcctcg
     1261 ttcacgagcg cggtgggctg taacgtgtgc tgcgcacgct cgcgccccag gtagttgcgg
     1321 gcgacctttc gcagctcacc gtagaccaac ggaaagagct gggaggcctg cggatcggcg
     1381 ggcttgggca tggactgaag ccgtaacgaa cggccgcccg ggatcgtaac accgttcgtc
     1441 acgggatcgg gcggagccgc gtacgtactg ctacgatccg gcacaacgcc ttcagcgttc
     1501 gacactcgcc acatgaccct cggcttgcgg ctgtacgccg cgttcgtcct cctcctcgtt
     1561 acaggcgcgt ccgcgttcgc ggccgacacg ggcagcgtgt cgggcgcggt cttcagccag
     1621 acgggcgctc cggtggcggg cgcgaccgtc aagatctccg gcgcggcact cccgatcggc
     1681 cgcgaaacgc agaccgacgc caacggcgtc taccgcttcg actatctcct gcccggcgaa
     1741 tacgccgtcg aggtggtggc cgagggcgtc gctccggtgc ggcgcggggc ggtggtcgcc
     1801 gtcggcaagg acacgcaggt cgagatgctc ctgggggtga ccgtgagcga atcggtcacc
     1861 gtgaacgctg tcactccggt cgtcgacgtg cgctcgagcg acgccagcct gaccgtcacg
     1921 gacgagaagt tcaacgcgct gccgatcgag cacagctacc gggggctctt ccagctggcg
     1981 cccggcgtgc ccgacaaccg cagccaggtg gggctgtcgg cgggcggcag ccgccaggac
     2041 aacacctatc tgctcgacgg cgccaacatc acgagccccg gtttcggcac gctggccatc
     2101 caggtgaatc agctcgacat cgccgaggtg aacctgacgc gagctggcat caccgccgaa
     2161 ttcggccgga ccgccggcac cgtggccaac gcggtgagcc gcagcgggtc gaaccggttc
     2221 acggggctgg ggcgcatcga ctggctgtca gagagtctgg tgagccgcta cacgctgccg
     2281 gacgacgtgg aggcggcggg ggtgcgtccg ggaacgttcc gcgacgggct cctgacctcg
     2341 caggctgagc cggccgtggg cgtcggcggg ccgctcgtcc gcgatctcat cttcttctac
     2401 gggtcggcgc gctaccagca cgacaccaag tgggggcgca tcaacaaggc cgacgtcgaa
     2461 ctgcccgacg aagtccgcaa gggccccgag ttcttcggca agatcacggc gagcctgtcg
     2521 gcaagccatc agctcaccgc cagccaccgt caccacccga tcgacgtgga ctacaacggg
     2581 ctcacgtcgg acttcgcgcc cagcgcggcc acggtgggca accgcggcag ccgcgtgacc
     2641 gcgttcgact gggcgtggtt ccaggggccg caccgctcgc tgagcgtgcg ctaccagcgg
     2701 acgcaggagt tcaacgagga cgtgcccgtg accgtgcttc cagatctccc gccgttcgac
     2761 ccgtcgcgcc tgacggccat gggccagtac accgacccgg cccaggccaa tctcattacg
     2821 ggcgccaggg agttcaccaa cgtccagaac tatcgccg
//
LOCUS       DASSYW010000678         2023 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_701966, whole genome shotgun sequence.
ACCESSION   DASSYW010000678 DASSYW010000000
VERSION     DASSYW010000678.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2023)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2023)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2023
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_701966"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            218..>2023
                     /locus_tag="VFN38_10830"
     CDS             218..>2023
                     /locus_tag="VFN38_10830"
                     /inference="COORDINATES: protein motif:HMM:NF014269.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LON peptidase substrate-binding
                     domain-containing protein"
                     /protein_id="HET9012299.1"
                     /translation="MAKVQRKEEILKSELPAALPLMALRSTIVYPLGTIAVQMGAPEN
                     LSLLRAYDEPGLVVALVVASGDHDEPIDSQRFIGRVGVAARVHERINLPGDTVQITLQ
                     GLRRIVIEEIQQNEPYPVAAIRPARETPADPSELDDLVTRVISAAETLAELVDRIPDE
                     VPAILKMNVSDPGRFADLAATNMNFRISDKDEVLQRLDVGQRLRFILNRLEREVSRAR
                     VMEDVKRQTEIKIEQHQREFYLRQQLRAIQAELGEADPGEKEAVELLRKIDEAKLPER
                     VGQEARRETERLRQLSPASSEYQVIRTYLDWILALPWNKRSGDDEIALKKVEEALDNK
                     HYGLSEAKERIIEFLAVRKLRGGDPHGPILCFVGPPGTGKTSLGEAIATSIGREFYRI
                     SVGGVRDEAEIRGHRRTYVGAMPGLLIQALRRVQVKDPVLMIDEIDKMSGGGPSGDPT
                     AAMLEVLDPSQNDEFVDHYLNLPFDLSGALFICTANNLFDIPAPLRDRMEVIRIAGYT
                     VEEKVEIAWRYLLPRLLEEHGISDKDIQFTDETLGFIGKRYSREAGLRNFERNLAAIM
                     RKRARKKAEGEEGAWVIDAEKVEEILGIPRYAVESA"
BASE COUNT          353 a          675 c          707 g          288 t
ORIGIN      
        1 ggcatcgtgt cggcgacgag ccgaggactc gcgcagcgga tgcggccggc gcgtggagaa
       61 agctcgccct gagaggtagt tgaccggttg ggtccgctcg tgacccgatc cccgtgcgcc
      121 tcgtcgtcag acgcgcgcaa gacgcgcaca gccgacagcg tggcggcgcg cgccgtgcac
      181 cgtggccacc gaactgccca ccattatctt acgcgccatg gccaaggtac agcgcaagga
      241 agagatcctg aaatccgagc tccccgcggc gctgccgctg atggcactgc gctcgacgat
      301 cgtgtatccg ctcggcacca tcgccgtgca gatgggcgcg ccggagaacc tgtcgctgct
      361 ccgcgcctac gacgagcccg gcctggtggt cgcgttggtg gtcgccagcg gcgaccacga
      421 tgagccgatc gactcccagc gcttcatcgg gcgggtgggc gtggcggcgc gcgtgcacga
      481 gcgcatcaac cttcccggcg acacggtgca gatcaccctc caggggctgc gccgcatcgt
      541 catcgaggag atccagcaga acgagcccta tcccgtcgcc gcgattcgcc cggcgcgtga
      601 gacgccggcc gatccgtcgg agctggatga tctcgtgacg cgcgtgatct ccgccgccga
      661 gacgctcgcc gagctggtgg accggatccc cgatgaagtg ccggcgatcc tcaagatgaa
      721 cgtgtccgat ccggggcgct tcgcggacct cgcggccacg aacatgaact tccgcatctc
      781 ggacaaggac gaggtgctcc agcggctcga cgtgggccag cggctgcgct tcatcctcaa
      841 ccgcctcgag cgcgaggtgt cgcgcgctcg cgtgatggag gacgtgaagc ggcagaccga
      901 gatcaagatc gaacagcacc agcgcgagtt ctacctgcgc cagcagctgc gggcgatcca
      961 ggcggagctc ggcgaagccg accccggcga gaaggaagcc gtggagctgc tgcgcaagat
     1021 cgacgaggcc aagctccccg agcgcgtggg ccaggaggcg cgccgcgaga cggagcgcct
     1081 gcggcagctg tcgccggcgt cgagcgagta ccaggtgatc cgcacctatc tcgactggat
     1141 cctcgcgctg ccgtggaaca agcgcagcgg cgacgacgag atcgcgttga agaaggtcga
     1201 ggaggcgctg gacaacaagc actacgggct gagcgaggcg aaggagcgca tcatcgagtt
     1261 cctcgccgtg cgcaagctgc ggggcggcga cccgcatggt cccatcctgt gcttcgtcgg
     1321 tccgccgggc accggcaaga cctccctggg cgaggcgatc gcgacgtcga tcggccgcga
     1381 gttctatcgc atctccgtgg gcggcgtgcg cgacgaagcc gagattcgcg gccaccggcg
     1441 cacctacgtc ggcgcgatgc cggggctgct catccaggcg ctgcgccgcg tgcaggtgaa
     1501 ggatcccgtc ctgatgatcg acgagatcga caagatgtct ggcgggggcc cctccggaga
     1561 ccccacggcg gccatgctcg aggtgctcga ccccagccag aacgacgagt tcgtcgatca
     1621 ctacctgaac ctgccgttcg atctctcggg cgcgctgttc atctgcacgg cgaacaacct
     1681 gttcgacatt cccgccccgc tgcgcgaccg gatggaggtc atccgcatcg ccgggtacac
     1741 ggtggaggag aaggtcgaga tcgcgtggcg ctacctgctc ccccgcctgc tggaggagca
     1801 cggcatcagc gacaaggaca tccagttcac cgacgagacg ctcggcttca tcggcaagcg
     1861 ctactcgcgt gaggcggggc tgcgcaactt cgagcgcaac ctcgcggcga tcatgcgcaa
     1921 gcgcgcgcgc aagaaggcgg agggcgagga gggcgcgtgg gtgatcgacg ccgagaaggt
     1981 ggaggagatc ctcggcatcc cccgctacgc ggtggagtcg gcg
//
LOCUS       DASSYW010000679         3401 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_500362, whole genome shotgun sequence.
ACCESSION   DASSYW010000679 DASSYW010000000
VERSION     DASSYW010000679.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3401)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3401)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3401
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_500362"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(88..1425)
                     /locus_tag="VFN38_10835"
     CDS             complement(88..1425)
                     /locus_tag="VFN38_10835"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HET9012300.1"
                     /translation="MSRIDRRTFIQRTTAAAALGVLAPWEPLLRAPGRPNILYIMSDD
                     LGYGDLGITGRTDYATPVLDALAREGVRLTQAYCAAPVCTPTRVALNTGRYPARARVG
                     LFEPLTTSDDGLLPEPPTLARLMKDAGYETGLIGKWHLGLRPEHHPLRHGYDEFYGFL
                     GAAADYASHVDTETHEVNFQDGDQPVATKGYLTDLFTDRTIRFIQRKRSRPFFLNLEY
                     NAPHWPWQAPGDPPYPDSMSSKSGGTPAVFGRMVKSMDDGIGRILAALRDAGRDRDTI
                     VIFTSDNGGERFSNMGPFSHGKMTLYEGGLRTPAFVRWPGVIAPNTTTDQTAITMDWT
                     ATLLARAGAQADARAPLDGIDLLPALTGAKPVPRDFYWRISQRVKQKALRSGDWKYLV
                     TSEGEHLFDLATDPGEKSDVKEKHPEVLAALRAKYAGWEGAVLPPVPLDPARR"
     gene            1525..1857
                     /locus_tag="VFN38_10840"
     CDS             1525..1857
                     /locus_tag="VFN38_10840"
                     /inference="COORDINATES: protein motif:HMM:NF015513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HET9012301.1"
                     /translation="MTTSLGTLELSALLAVSRLGEGAYGLAVRQDLSERAGREYSVGA
                     IYTTLQRLEDKGLLASRASEPLPVRGGRSRRHFRLTGAGSRAIRDAERQATSMWASVG
                     RPIRPRPA"
     gene            1854..3050
                     /locus_tag="VFN38_10845"
     CDS             1854..3050
                     /locus_tag="VFN38_10845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012302.1"
                     /translation="MTAPRVRPRPPRIAASLCERRNDFRPQAPLAERLLAALGAHPSF
                     ADAVLGDLAEERARREKAHGRAAARWWYAREAIRAVPHLLWNALRHGGSSGRAHVAAL
                     LAGVALVPALIAALALRDSPPAFLVFEGQRGSDVVNGVVLNSTHPVQLVTRALDAKKR
                     ELPPGSVRYRWAAGAPIAVTESGVVTCTEPGDAELRATAGAVATTLIVRCHPVSAVHG
                     ELVLSMVAGETGQELPISAYAPDGQRVSLLAFEARVQDSTIAVMNGLHIRPIAPGTTS
                     VTVRIGDAQTLIHVSVYERVRTLVGLRPDQRLVSAPVRLAAGDTIRWPLPTGKFWLRF
                     TPDSGAQPVPRIVVSGGVSCMPAFGPTDQATCLVRAPGARVRIAHPGGSRKLVVGHLA
                     LERRDE"
     gene            3083..>3401
                     /locus_tag="VFN38_10850"
     CDS             3083..>3401
                     /locus_tag="VFN38_10850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012303.1"
                     /translation="MTTHLKLLAAGAIVACPALLGAQAQPPALRRAHEIVALMNSAPP
                     AAIRAYVDSAFNPWMRELPMGAHLNFLIGNRERSRGLEWVEVQEDSPALVVALLKRKL
                     TGDH"
BASE COUNT          430 a         1232 c         1249 g          490 t
ORIGIN      
        1 cacgctggag ctcctgtcgt cctgaggaga gcgcggcggc gcgaaggaac tgcgacttcg
       61 cgtcttccac gctcgtggtc cgatccgcta ccgcctggcc ggatccagcg gcaccggcgg
      121 cagcaccgca ccctcccagc cggcgtactt cgcccgcagc gccgccagca cctcggggtg
      181 cttctccttg acgtccgact tctcgcccgg atcggtcgcg aggtcgaaca gatgctcgcc
      241 ctcggaggtg acgaggtact tccagtcgcc gctgcgcagc gccttctgct tcacgcgctg
      301 ggagatgcgc cagtagaagt cgcgcggaac gggcttcgcc cccgtcagcg ccgggaggag
      361 gtcgatcccg tcgagcgggg cgcgtgcgtc ggcctgggcg ccggcgcggg cgagcagcgt
      421 cgccgtccag tccatcgtga tcgccgtctg gtcggtcgtg gtgttcggcg cgatcacgcc
      481 cggccagcgc acgaacgccg gggtgcggag gccgccctcg tacagcgtca tcttgccgtg
      541 gctgaacggc cccatgttcg agaaccgctc cccgccgttg tcgctcgtga agatgacgat
      601 ggtgtcgcgg tcgcgccccg cgtcgcgcag cgcggcgagg atccggccga tcccgtcgtc
      661 catgctcttc accatccgcc cgaacaccgc gggggtgccg ccgctcttcg agctcatcga
      721 gtccggatac ggcgggtcgc ccggcgcctg ccagggccag tgcggcgcgt tgtactcgag
      781 gttgaggaag aaggggcggc tgcgcttccg ctggatgaag cggatcgtgc ggtcggtgaa
      841 caggtcggtg agatagccct tcgtcgccac gggctggtcg ccgtcctgga agttcacctc
      901 atgggtctcg gtgtccacgt ggctcgcgta gtcggcggcg gcgccgagga agccgtagaa
      961 ctcgtcgtag ccgtggcgca gcgggtggtg ctcggggcgc agcccgaggt gccacttgcc
     1021 gatcaacccg gtctcgtagc cggcgtcctt catcagccgg gcgagcgtcg gcggctcggg
     1081 cagcaggccg tcgtcgctgg tggtgagcgg ctcgaacagg cccacgcgcg cgcgcgccgg
     1141 atagcggccg gtgttgagcg cgacgcgcgt cggggtgcac accggagcgg cgcagtaggc
     1201 ctgggtgagg cgcaccccct cccgggcgag cgcgtcgagc acgggggtcg cgtagtcggt
     1261 gcggccggtg atgccgagat ctccgtatcc gagatcgtcg gacatgatgt agaggatgtt
     1321 cggccggccc ggtgcgcgca gcagcggctc ccagggcgcc agcacgccga gcgccgccgc
     1381 ggcggtcgtc cgctggatga aggtgcgtcg gtcgatccgg gacatcgggg ctcggctgga
     1441 ggagtggtgc ccgcgaagat ggcgacgggg ccccgatccg caacgccctt gcacgtttct
     1501 tatttgtttt acaaactagg acttatgacg acctcactcg gcacgctcga gctttccgcc
     1561 ctcctcgccg tctcccggct cggggaaggg gcctacggcc tcgccgtgcg acaggacctc
     1621 agcgagcgcg cgggccggga gtattcggtg ggcgccatct acacgacgct ccagcggctg
     1681 gaggacaagg ggctgctcgc ctcgcgcgcc agcgagccgc tgccggtgcg cggcggccgg
     1741 tcgcgccggc acttccggct caccggggcg gggtcgcgcg ccatccgcga cgccgagcgg
     1801 caggcgacct ccatgtgggc cagcgtggga cggccgatcc gcccgaggcc cgcatgaccg
     1861 cgccccgcgt ccgtccgcgc cccccgcgca tcgccgcgtc gctttgcgag cggaggaacg
     1921 acttccgccc gcaagccccg ctggccgaac gcctgctcgc cgccctcggc gcccacccgt
     1981 ccttcgccga cgcggtgctc ggcgacctgg ccgaggagcg cgcgcggcgc gagaaagcgc
     2041 acggcagggc ggcggcgcgc tggtggtacg cgcgcgaggc catccgcgcg gtgccgcacc
     2101 tgctgtggaa cgccctgcgg cacgggggat cgagcgggcg cgcacacgtg gcggcactgc
     2161 tggcgggggt ggcgctggtg cccgccctga tcgccgcgct cgccctgcgc gacagtcccc
     2221 ccgccttcct ggtgttcgag ggccagcggg gcagcgacgt cgtcaacggc gtcgtgctga
     2281 acagcaccca ccccgtgcag ctcgtgacgc gcgcgctcga cgcgaagaag cgcgagctgc
     2341 ccccgggcag cgtgcggtat cggtgggcgg cgggcgcgcc gatcgccgtg acggagagcg
     2401 gcgtcgtcac ctgcacggag ccgggcgatg ccgagctgcg cgcgacggcg ggcgcggtgg
     2461 cgacgacgct gatcgtccgc tgccaccccg tgagcgcggt gcacggggag ctggtgctct
     2521 ccatggttgc cggcgagacg gggcaggagc tgcccatcag cgcgtacgcc ccggacggcc
     2581 agcgcgtgag cctgctcgcg ttcgaggcgc gggtgcagga cagcaccatc gccgtcatga
     2641 acgggctcca catccggccg atcgcgccgg gcaccacctc ggtgacggtg cggatcggcg
     2701 acgcccagac cctcatccac gtgagcgtgt acgagcgggt gcgcacgctg gtggggctgc
     2761 gccccgacca gcggctcgtg agcgcgccgg tgcggctcgc ggccggcgac acgattcgct
     2821 ggccgctgcc cacggggaag ttctggctgc gcttcacccc cgactcgggt gcgcagccgg
     2881 tgccccggat cgtggtctcc ggcggcgtct cgtgcatgcc ggcgttcggc cccaccgacc
     2941 aggccacctg cctcgtgcgc gcgccgggcg cccgggtgcg catcgcccat cccggcgggt
     3001 cgcggaagct cgtcgtcggc cacctcgcgc tcgagcggcg cgacgagtga accccgcgcg
     3061 acgccatcgt gtccaaccgt ccatgactac acatctcaag cttctcgccg ccggcgccat
     3121 cgtcgcgtgc ccggcactgc tcggcgccca ggcgcagccc cccgccctcc ggcgcgcgca
     3181 cgagatcgtc gccctgatga acagcgcgcc ccccgccgcc atccgcgcct acgtggactc
     3241 ggcgttcaac ccctggatgc gcgagctgcc gatgggggca cacctcaact tcctgatcgg
     3301 caatcgcgag cgctcccggg ggctggagtg ggtggaggtg caggaggatt cgcccgcgct
     3361 cgtcgtcgcg ctgctcaagc ggaagctcac cggcgaccac a
//
LOCUS       DASSYW010000680         2329 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1459459, whole genome shotgun sequence.
ACCESSION   DASSYW010000680 DASSYW010000000
VERSION     DASSYW010000680.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2329)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2329)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2329
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1459459"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(228..473)
                     /locus_tag="VFN38_10855"
     CDS             complement(228..473)
                     /locus_tag="VFN38_10855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012304.1"
                     /translation="MGAKSHRNMESDRPESGGADKDMVREKSGLLDRDKERFAREEHE
                     KNAAEANSQRELSDRNQPDFPSEFSIDNPRNPDPSNK"
     gene            643..2136
                     /locus_tag="VFN38_10860"
     CDS             643..2136
                     /locus_tag="VFN38_10860"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HET9012305.1"
                     /translation="MRLPRLAAPALGALLLAVPLAAQRPAPRAPAKGAPAKAAVTPPA
                     PPTTGYLQGVAIDSLHEEPLVGALISVEGTTRLAITDSLGRFLIDSIAPGAHRVLVDH
                     PMLDTLGINLVTPPMTIGANELTRTVIAVPGGEFLVNLFCPAARRALGPGALVGRVRE
                     PDSDSAAVGARVSLVWYDPDPPGLPANLRVSKKPPRVREATVGADGTYRLCGLPDRYE
                     AKLQAQRKDGGATAEVTVLQDGGLLALRSMSVAALPVVATGKDSAGAPVQQPRGRARV
                     FGKVLNRNGAPVAGARVGLMGTSAATLTRANGDFVLDSLPAGTQALVVRQIGYRPTEV
                     AVDLSARTPARVTVQLGAFVPELTPVEVVSRRDEGLQKVGYLDRKRTSASGYFMGPEQ
                     IEKRNAMKFTDILRSTPGIRVSESNGQATVSSTRSTTANGCVTMFVDGAQWQQIEAGD
                     LDSFVQPNEVAAIEVYSGATVPAQFTTAGQSCAAVVVWTKTRVLRRK"
     gene            2142..>2329
                     /locus_tag="VFN38_10865"
     CDS             2142..>2329
                     /locus_tag="VFN38_10865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012306.1"
                     /translation="MPIVHHPFNFALGPLNLTGFGLAMMAAFGMAHWVSQEVLEQRGD
                     DPMVMNDVTFAALVGTIIG"
BASE COUNT          329 a          825 c          827 g          348 t
ORIGIN      
        1 gcgatggtga gccgcgggcg gcggatcggc gcctcgtcga gggcgcgcgc tggggtgagt
       61 ggcgtcatgg gaatggcgtg cgcacgcacc gccgccatgg tacaaggtga cgcttcaatg
      121 ccgtgcgacg caagcgcatg acgcccacat acaaacgttc acgtccgcac tgccgagctg
      181 tcaccgaatc ggcgtgacag cccggcggcg cgggtgcaga gatggcgcta cttgttgctc
      241 gggtcgggat tccgcgggtt gtcgatcgag aactcggacg ggaagtccgg ctggttccgg
      301 tccgacagct cgcgctggga gttcgcctcg gctgcgttct tctcatgctc ctcacgggcg
      361 aaccgctcct tgtcccggtc cagcagcccc gacttctcgc ggaccatgtc cttgtcggcg
      421 ccgcccgatt ccggacgatc gctctccatg ttcctgtgcg actttgcacc catgacgact
      481 ctcctcggct gtgtgtgccg ggagacagag gcagctttcg ttcccctccg ccgtccgcca
      541 gggcaggtgc ggcgggaagg cgaagggggg cccggatccc tacggaggga ccttcgcggc
      601 ggattcatgg gtagagcggg gatcccgacc tatattcccc ccatgcgtct gccacgtctc
      661 gccgctcccg ccctcggagc gctcctgctc gccgttcccc tcgcggcgca gcgtcccgct
      721 cctcgcgccc cggcgaaggg agcgcccgcc aaggcggccg tcaccccccc cgcgccaccc
      781 acgaccgggt acctgcaggg ggtcgccata gacagcctcc acgaggagcc gctcgtgggc
      841 gccctcatct cggtggaggg caccacgcgg ctggcgatca ccgactcgct cgggcgattc
      901 ctgatcgaca gcatcgcgcc gggcgcgcac cgcgtcctcg tcgatcatcc gatgctggac
      961 accctcggca tcaacctggt gacgccgccg atgacgatcg gggcgaacga gctgacccgc
     1021 accgtcatcg cggtgccggg tggcgagttc ctcgtgaacc tcttctgtcc cgcggcgcgg
     1081 cgggcgctcg gacccggtgc cctcgtcggc cgcgtccgcg agccggacag cgactccgcc
     1141 gccgtcggtg cccgcgtctc gctggtctgg tacgaccccg atccgccggg acttccggcc
     1201 aacctgcggg tgagcaagaa gccgccgcgc gtgcgcgagg ccaccgtggg cgcagacggc
     1261 acctatcgcc tgtgcgggct gccggaccgg tacgaagcca agctccaggc gcagcggaag
     1321 gacggcggcg ccaccgccga ggtgacggtg ctccaggatg gcgggctgct ggcgctgcgc
     1381 agcatgagcg tggccgcgct gccggtggtg gcgaccggga aggacagcgc cggcgccccg
     1441 gtccagcagc cgcgcggccg ggcccgcgtg ttcggcaagg tgctgaaccg gaacggggcg
     1501 ccggtcgccg gggcgcgcgt ggggctcatg ggcacgagcg ccgcgacgct cacccgcgcc
     1561 aacggcgact tcgtgctcga ttcgctgccg gccgggacgc aggcgctcgt cgtgcggcag
     1621 atcgggtacc ggcccaccga ggtggcggtg gatctctccg cgcgcacccc ggcgcgggtc
     1681 accgtgcagc tcggcgcctt cgtccccgag ctcacccccg tggaggtggt gtcgcgccgc
     1741 gacgaggggc tgcagaaggt gggctacctc gatcgcaagc gcacgtcggc gagcggctac
     1801 ttcatgggtc ccgagcagat cgagaagcgc aacgcgatga agttcaccga catcctgcgg
     1861 tccacgccgg gcatccgcgt gagcgaatcg aacgggcagg ccacggtctc ctccacccgc
     1921 tccacgacgg cgaacggctg cgtgacgatg ttcgtggacg gcgcgcagtg gcagcagatc
     1981 gaggcgggcg acctcgactc cttcgtgcag cccaacgagg tggcggcgat cgaggtgtac
     2041 agcggcgcca cggtgccggc acagttcacg acggccggcc agagctgcgc cgcggtggtc
     2101 gtctggacca agacgcgcgt cctgcgcagg aagtgaaccc gatgccgatc gtccaccacc
     2161 cgttcaactt cgccctcggc ccgctgaacc tgacgggctt cggcctggcg atgatggccg
     2221 cgttcgggat ggcgcactgg gtatcgcagg aggtgctcga gcagcggggc gacgacccga
     2281 tggtgatgaa cgacgtgacg ttcgccgccc tcgtcggcac gatcatcgg
//
LOCUS       DASSYW010000681         3342 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_773574, whole genome shotgun sequence.
ACCESSION   DASSYW010000681 DASSYW010000000
VERSION     DASSYW010000681.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3342)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3342)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3342
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_773574"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..753)
                     /locus_tag="VFN38_10870"
     CDS             complement(<1..753)
                     /locus_tag="VFN38_10870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase"
                     /protein_id="HET9012307.1"
                     /translation="MAIASGIFRQYDVRGIVGQDLTGEVARALGVAYAALLRERGIVG
                     DVAVGRDNRPSGDMLREALVDGLTSAGVDVVDIGVVPTPLLYWSLHHLPVVGGIQITG
                     SHNPAEYNGFKLSLGRESLHGHDIQHLLALIRRGGAAGDRRGTVRQEQVIDRYVADVA
                     ARIGRISRPMKVVYDCGNGAGALVAPQLMRALGLDAVGLFTESDGTFPNHHPDPTVPE
                     NLRDLIAAVKREGAEIGVAFDGDADRIGMVDGD"
     gene            complement(809..2350)
                     /locus_tag="VFN38_10875"
     CDS             complement(809..2350)
                     /locus_tag="VFN38_10875"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0050136 - NADH dehydrogenase (quinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit N"
                     /protein_id="HET9012308.1"
                     /translation="MRIFDLAIPAQLSAALVPDLVLMAGAMILLLVAVWRRESAAHQR
                     TVGVLSIGLAVVTLGTVLWMMFNRVSAGDGPIAVDNFRWMVDIVILLGTIAAIALGID
                     DNDRAGTTTAETHVLILLASSGMMLLAAARDLMIVFLGIELMSVAVYALAGLNRRSQR
                     SAEGALKYFLLGAFSTAFLLYGIALVFGATGTTGLHEIRMRVLQHGLESSPLLLTGIA
                     LLLVGFGFKVSSVPFHMWAPDVYDGSPNPVTAYMAATVKAAAFAAFLRVWLEAFPGEY
                     GIWHRAVVGLAIATMIVGNAIGLQQRNLKRLLAYSSIAHAGFILVALASGTLQGASAM
                     LFYLLAYTLATFGAFAVIVVMSRGDAPVTTDDISGLWSVRPWLAVAMTVFMLALMGFP
                     IAGGIGFLAKWYILKAALQAPAPQVTLAVVLVLTTVISAGYYLYVVMVMFMRPRRVEA
                     PALDRTPGWTRFVMVACAAAILILGILPDYAVRYAQVGLPRVTAPTDAAASAPPRPIP
                     TAFAR"
     gene            complement(2350..3336)
                     /locus_tag="VFN38_10880"
     CDS             complement(2350..3336)
                     /locus_tag="VFN38_10880"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HET9012309.1"
                     /translation="MKAATGAGTGTFNIIYMQAIGSVMDMGTMQILLFVAFALGFAIK
                     VPMFPFHTWLPDAHVEAPTAGSVVLAAIMLKLGTFGFIRLAVPLFPGAAMDPTVRMII
                     LVLAVIGIVYGALVSLVQPDFKKLVAYSSVSHLGFVMLGLFALTVQSVQGALMVMISH
                     GLSTGALFFLIGMIYERRHTRLIEDYGGIARVVPMFAAVLTLVSLSSIGVPGTNGFIG
                     EFLVLLGAFRTFPVLALVAATSVIIAAAYLLWAIQRILFNPLDKPVNEHVPDLNRREL
                     ALVLPLVAGIIWLGVYPAPVLRRMQPAAEQFVRLVETRAATSTAAAAPRGGR"
BASE COUNT          601 a         1092 c         1223 g          426 t
ORIGIN      
        1 gtcgccgtcc accatcccga tccggtcggc gtcgccgtcg aacgccacgc cgatctcggc
       61 gccctcgcgc ttcaccgccg cgatcaggtc gcggaggttc tccgggacgg tgggatcggg
      121 atgatgattg gggaaggtgc cgtcgctctc cgtgaacagt ccgaccgcgt ccaggccgag
      181 ggcccgcatg agctgcggcg ccacgagcgc tcccgccccg ttcccgcagt cgtacacgac
      241 cttcatcgga cgcgagatcc ggccgatcct cgccgcgacg tcggcgacgt agcggtcgat
      301 cacctgctcc tggcgcaccg tgccgcggcg gtcgcccgcc gcgccaccgc ggcggatgag
      361 cgcgaggagg tgctggatgt cgtgcccgtg cagcgattcc ctgccgagcg acagcttgaa
      421 gccgttgtac tcggcgggat tgtgcgagcc ggtgatctgg atgcccccga cgacggggag
      481 gtggtgcagg ctccagtaga gcagcggcgt cggaacgacg ccgatgtcca cgacgtcgac
      541 cccggcgctc gtgagcccgt cgacgagcgc ctcccggagc atgtcgccgc tggggcggtt
      601 gtcgcggccg accgcgacgt cgcccacgat gccgcgttcg cgcaggagcg ccgcataggc
      661 gacgccgagg gcgcgcgcga cctcgccggt gagatcctgc cccacgatgc cgcggacgtc
      721 gtactgccga aagatgccgg aggcgattgc catcgagaat tagcagggct ggaaagagtg
      781 cggggccacc ggagcggccc cgcgacgatc atcgagcgaa ggcggtgggg atcggtcgag
      841 gtggcgcgga ggccgccgca tccgtcgggg cggtgacccg tggcaacccg acctgcgcat
      901 aacgtaccgc gtaatcgggg aggatgccca ggatcaggat cgccgccgcg caggcgacca
      961 tgacgaaccg cgtccacccc ggggtgcggt cgagcgccgg cgcttcgacc cggcgcgggc
     1021 gcatgaacat caccatcacg acgtacaggt agtagcccgc cgagatcacc gtcgtgagca
     1081 cgagcaccac ggcgagcgtg acctgcggcg ccggcgcctg gagggccgcc ttgaggatgt
     1141 accacttcgc caggaagccg atgccgccgg cgatcgggaa gcccatgagc gcgagcatga
     1201 agacggtcat cgccaccgcc agccacggcc ggacgctcca cagcccgctg atgtcgtcgg
     1261 tggtgaccgg cgcgtcgccg cgcgacatca cgacgatgac cgcgaaggcg ccgaaggtgg
     1321 cgagcgtgta ggcaaggagg tagaacagca tcgccgacgc gccctgcagc gtgccgctgg
     1381 cgagggcgac gaggatgaag cccgcgtgcg cgatggagga gtacgcgagc agccgcttga
     1441 ggttgcgctg ctggagcccg atcgcattgc cgacgatcat cgtcgcgatg gcgaggccga
     1501 cgacggcacg atgccagatg ccgtactccc cggggaacgc ctcgagccag acgcgcagga
     1561 aggcggcgaa cgcggcggcc ttcaccgtgg cggccatgta cgccgtgacc gggttcggcg
     1621 agccgtcgta gacgtcgggg gcccacatgt ggaagggcac cgaggagacc ttgaacccga
     1681 acccgacgag cagcagcgcg atgccggtga ggagcagcgg gctggactcg agcccatgct
     1741 gcaggacgcg catgcggatc tcgtggagcc ccgtggtgcc ggtggcgccg aagacgagcg
     1801 cgatgccgta cagcaggaac gccgtggaga aggcgccgag caggaagtac ttgagcgcgc
     1861 cctcggcgga gcgctggctc cggcgattga ggccggcgag cgcatacacc gccaccgaca
     1921 tcagctcgat gccgaggaag acgatcatga ggtcgcgcgc cgcggcgagg agcatcatcc
     1981 cggacgacgc gagcaggatg agcacgtgcg tctccgccgt ggtcgtgccg gcgcggtcgt
     2041 tgtcgtcgat gccgagggcg atcgcggcga tggtgccgag caggatgacg atgtcgacca
     2101 tccagcggaa gttgtcgacc gcgatggggc cgtcgccggc cgacacgcgg ttgaacatca
     2161 tccacagcac cgtgccgagc gtgacgacgg caaggccgat ggacagcacg ccgacggtgc
     2221 gctggtgcgc ggccgactcg cgccgccaga cggcgaccag gagcaggatc atcgcgccgg
     2281 ccatgagcac gagatccggc accagcgccg cgctgagctg cgcggggatg gcgaggtcga
     2341 agatgcgcat cagcggcctc cccgcggcgc ggcggccgcg gtggacgtcg cggcgcgcgt
     2401 ctccacgagg cgcacgaact gctcggccgc cggctgcatg cgccgcagca ccggcgccgg
     2461 gtagacgccg agccagatga tgcccgccac gagcggcagc acgagcgcca gctcacggcg
     2521 gttcaggtcg ggcacgtgct cgttcacggg cttgtcgagc gggttgaaca ggatgcgctg
     2581 gatggcccag agcaggtacg ccgcggcgat gatcacgctc gtggcggcga cgagcgccag
     2641 cacggggaag gtgcggaacg cgccgagcag cacgaggaac tcaccgatga agccgttggt
     2701 ccccggcacg ccgatggagc tcagcgacac gagggtgagc acggcggcga acatcggcac
     2761 gacgcgggcg atgccgccgt agtcctcgat gagccgcgtg tggcgccgct cgtagatcat
     2821 gccgatcagg aagaagagcg cgccggtgga gaggccgtgg ctgatcatca ccatgagcgc
     2881 gccctgcacg ctctgcacgg tgagggcgaa cagcccgagc atgacgaagc cgagatggct
     2941 caccgagctg taggcgacca gcttcttgaa gtccggctgg acgagcgaca cgagcgcgcc
     3001 gtacacgatg ccgatgacgg cgagcacgag gatgatcatg cgcaccgtgg gatccatcgc
     3061 cgcgcccgga aagagcggaa cggcgaggcg gatgaagccg aaggtgccga gcttcagcat
     3121 gatggccgcc agcacgaccg agccggcggt gggcgcctcg acgtgcgcgt caggcagcca
     3181 ggtgtggaag ggaaacatcg ggaccttaat cgcgaacccc agggcgaacg ctacaaacaa
     3241 aaggatctgc atcgtaccca tatccatgac agatccgatc gcctgcatgt aaatgatatt
     3301 gaacgtcccg gttcccgctc ctgtcgcggc tttcactgaa tt
//
LOCUS       DASSYW010000682         2146 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_785650, whole genome shotgun sequence.
ACCESSION   DASSYW010000682 DASSYW010000000
VERSION     DASSYW010000682.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2146)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2146)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2146
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_785650"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1119)
                     /locus_tag="VFN38_10885"
     CDS             complement(<1..1119)
                     /locus_tag="VFN38_10885"
                     /inference="COORDINATES: protein motif:HMM:NF015863.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY-associated TM helix domain-containing
                     protein"
                     /protein_id="HET9012310.1"
                     /translation="MQLRTLLFWPHLIAGVAAGAVILVMSVTGVALTYERQLIAWSNS
                     DYRSVPPAAGAPRMPVEELLAAYSAAGGGPVANVAVGAEASDPVIVTAGPRTVYLDAY
                     SGRVLGEGRRGMRQFMSDMRAWHRWLAYEGEGRTTARAITGWSNVAFLFIVVSGLYLW
                     FPRRWTWKHLRPVVLFTSGARGKARDFNWHNVIGAWCLVPLFIVVISAVPISFPWGND
                     LVYRAMGEEPPARRGGGPGEQGRGEGRGARGRGDAPAREARQPLAGAAGLNGLLTRAA
                     QQESEWQTISVRIPDSPRVPLAFAIDRGDGGQPQLRSTLTLDRAGSVVTYETFASQTP
                     GRQMRSIMRFAHTGEVLGLTGQTIAGTATAGSVVLVWTG"
     gene            complement(1257..>2146)
                     /locus_tag="VFN38_10890"
     CDS             complement(1257..>2146)
                     /locus_tag="VFN38_10890"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF013345.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HET9012311.1"
                     /translation="TVLEAEAVAAFCEDILIANELVTADKCGRAAALAASRRITVAVD
                     SPEGLDALAAAARSAGTTLGVLVDLNVGQMRCGVLPGEAALALATRAARTPGVELRGV
                     MGYEGHVQPVRERAEREAQARRAMQGLVDTAAQLRGSGLPCDIVSAGGTGTFDISGRV
                     PGVTEIQAGSYALMDTDYGDVGVPFEQAFFVLGTVVSRPAPDRCVADAGHKSATKDHG
                     LPRVYGIDGAAVTSLNDEHATIAIPPVCSIRIGERIRLVPSHTDPTMNLHDVVYAFDG
                     DRVVDIWPIAARGYGSRAV"
BASE COUNT          340 a          768 c          749 g          289 t
ORIGIN      
        1 gccggtccac accagcacca ccgagcccgc ggtggcggtg ccggcgatcg tctgccccgt
       61 caggccgagc acttcgccgg tgtgcgcgaa gcgcatgatg ctgcgcatct ggcggccggg
      121 tgtctgcgac gcgaacgttt cgtaggtgac aacggagccc gcccgatcga gcgtcagcgt
      181 cgagcgcaac tgcggctgtc cgccgtcgcc gcggtcgatg gcaaacgcca gcggcacgcg
      241 cggcgagtcg ggaatgcgca cactgatggt ctgccactcg gattcctgct gtgcggcgcg
      301 cgtcagcagc ccgttcaacc cggcggcgcc ggccaacggc tggcgcgctt cgcgcgcggg
      361 cgcatcgccg cggccgcgag cgccgcggcc ttcgccgcgc ccctgctcac ccggtccacc
      421 accacggcgg gcgggcggct cctcgcccat cgcgcgatac acgaggtcgt tgccccaggg
      481 aaacgagatc ggcaccgccg aaatgacgac gatgaagagc ggaaccaggc accaggcgcc
      541 gatgacgttg tgccagttga agtcgcgcgc cttgccgcgt gccccgctcg tgaacaggac
      601 caccggacgc aggtgcttcc acgtccagcg gcgagggaac cacaggtaga gccccgagac
      661 gacgatgaag agaaacgcga cgttcgacca gccggtgatc gcgcgcgccg tcgtgcgccc
      721 ctcgccctca tacgccagcc agcggtgcca ggcgcgcatg tccgacatga actggcgcat
      781 cccccgccgg ccctcgccga gcacgcggcc ggagtaggcg tcgaggtaga ccgtgcgcgg
      841 ccccgccgtg acgatcacgg ggtcgctggc ctcggctccc acggccacgt tggccaccgg
      901 gccgccgccg gccgccgagt acgccgcgag cagctcctcc acgggcatgc ggggcgcacc
      961 ggccgcgggc ggaacggatc ggtagtcgct gttcgaccac gcgatgagct ggcgctcgta
     1021 ggtgagcgcc accccggtga cggacatgac caggatgacg gcgccggcgg cgacgccggc
     1081 aatcagatgg ggccagaaca ggagggttcg cagctgcatt tgatattgag actgagtctc
     1141 acatgcatta aatatccgac catttcggtc tgtcaagccc ctgaactggt cagggctcgc
     1201 cagaccgagg cagggtgggc ggagtgagcg gggtgggcgg agaagggaga gcggttttag
     1261 accgccctgg acccgtatcc gcgagcggcg atcggccaga tgtccacgac gcgatccccg
     1321 tcgaacgcgt agaccacgtc gtggaggttc atcgtcgggt cggtgtgcga cggcacgagg
     1381 cgaatccgct cgccgatacg aatcgagcac acgggcggaa tcgcaatcgt cgcgtgctcg
     1441 tcgttgagcg acgtgacggc agcgccgtcg atgccgtata cgcgcggcag gccgtgatcc
     1501 ttcgtggcgg acttgtgccc cgcgtcggcg acgcagcgat cgggagcggg ccggctcacg
     1561 acggtgccga gcacgaagaa cgcctgctcg aacggcacgc ccacgtcgcc gtagtcggtg
     1621 tccatcagcg cgtacgaacc cgcttgaatc tcggtcacgc ccggcacgcg gccgctgatg
     1681 tcgaaggtgc cggtgccgcc ggccgacacg atgtcgcacg gcagccccga gccgcgcagt
     1741 tgcgccgccg tgtccacgag cccctgcatc gcgcgccggg cctgcgcctc tcgctcggcg
     1801 cgctcgcgta ccggctgcac gtgaccttcg tagcccatga caccgcgaag ctcgacgccc
     1861 ggtgtacgcg cggcacgcgt ggccaatgcc agcgccgcct cgcccggcag cacgccgcag
     1921 cgcatctgcc ccacgttcag atccacgagc acgccgaggg tggttcccgc gctgcgcgcc
     1981 gcagccgcga gggcatcgag cccttccggc gaatccaccg ccaccgtgat gcgccgcgac
     2041 gcggccagcg cggcggcacg gccgcacttg tcggccgtca cgagctcgtt ggcgatgagg
     2101 atgtcttcgc agaacgccgc cacggcctcg gcctcgagca cggtgg
//
LOCUS       DASSYW010000683         2298 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1033939, whole genome shotgun sequence.
ACCESSION   DASSYW010000683 DASSYW010000000
VERSION     DASSYW010000683.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2298)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2298)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2298
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1033939"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..195)
                     /locus_tag="VFN38_10895"
     CDS             complement(<1..195)
                     /locus_tag="VFN38_10895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012312.1"
                     /translation="MTRKPLVFTTTHRIRFSELDPYNHVGTGRIATYFVDHRMQGLRL
                     HIGWDVATLSSLPFAVWVRRL"
     gene            complement(451..993)
                     /locus_tag="VFN38_10900"
     CDS             complement(451..993)
                     /locus_tag="VFN38_10900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TspO/MBR family protein"
                     /protein_id="HET9012313.1"
                     /translation="MNHHESVDASSAESRDGSRSWMALLGWVALAATAGAVGGFASRD
                     AGVFYAALAKPVWAPPGWLFGPVWSALYLLMGVAAWLVWRAQPATPADRASRRLGLAL
                     FVGQLGLNALWTWLFFAWRQGALAFVEIALLWLAVAITTWHFGRVRPLAAWCLVPYLG
                     WVSFAAALTWAVWQRNPGLL"
     gene            complement(1146..2186)
                     /locus_tag="VFN38_10905"
     CDS             complement(1146..2186)
                     /locus_tag="VFN38_10905"
                     /inference="COORDINATES: protein motif:HMM:NF014068.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HET9012314.1"
                     /translation="MERRRIGVLGFDGVQALDFIGPCDAFASDAFTPDVFPPGAYGVT
                     PPPAALDEGGVNGRPYEIVVIGLRGRKFTASSGVMFTAHCDLDSAPPLDTLIVPGGSG
                     LRASGNGERAAEWIAGRAHRIRRIASVCTGVYGLAPSGLLDGRRVATHWSAVRDVRQR
                     FPKLSVDPDAVYLKDGPFYSSAGITAGIDLALALIEEDCGPNAALAVAREMVVYYKRP
                     GGQNQFSEPLRFQFAAADRFADLAAWVQSHLRAPISVESMAARACMSVRHFSREFKGR
                     FGVTPAVFVEEMRMAEASRRLAAQRVSIAAVGRSVGYQNEDVFRRAFERRFGVTPKAY
                     RSRFDVATPAFT"
BASE COUNT          410 a          801 c          771 g          316 t
ORIGIN      
        1 cagacggcgg acccagacgg cgaaggggag gctcgacagc gtcgcgacat cccagccgat
       61 gtgcaggcgg agaccctgca tgcgatgatc gacaaagtag gtcgcaattc tgcccgtccc
      121 gacgtggttg taggggtcga gctccgaaaa ccggatcctg tgggtggtcg tgaagaccag
      181 cggcttccgt gtcatgggaa acgaagggag aaagccacct gcgaatcggt tcagccggtt
      241 gcgagcccga tggcatggcg ggttcgcatt gcctgcgagc atggtcgaga aggctcggtg
      301 gtcgcctcag cggttgctcg ttcgggatgg tggcgcatcg tgccggcacc tcgagtcagg
      361 ccgcacgaca cgactcacca tgttggtgcg acgacggcgc gttccactgg acgcccgtcg
      421 gccgtcacca ccggcggtca caccgtgccg ctacagcagg ccgggattgc gctgccacac
      481 cgcccaggtc aacgccgccg cgaagctcac ccagccgagg tacggcacga gacaccacgc
      541 tgccagcggt cgcacccgcc caaagtgcca ggtcgtgatg gcgacggcaa gccacaacag
      601 cgcgatctcg acgaacgcca gcgccccttg gcgccaggcg aagaagagcc atgtccagag
      661 ggcattcagc ccgagttgcc ccacgaacag cgcgagcccg agccgcctgc tggcgcgatc
      721 cgccggcgtc gcgggttgcg cgcgccacac gagccaggcc gcgacgccca tgagcaggta
      781 cagcgcggac cacaccggac cgaacagcca gcctggtggc gcccagaccg gcttcgccag
      841 tgcggcgtag aacacccccg cgtcgcgcga cgcgaagccg ccgacggcgc cggccgtcgc
      901 ggcgagcgcg acccacccga ggagcgccat ccagctccgc gatccgtccc gggattccgc
      961 gctcgacgcg tccaccgatt catgatggtt catggttcac cgaagatgta tgggtgtcac
     1021 ccgacgcccg gcgcgcggtt gaatgccgtt gccatccgga gcgtgcacct ggatgacggg
     1081 gatgccgtgt cgccgaagct ccagaagtcg cggccgccag cgagtccgtc gccctgccgg
     1141 gcgccctacg tgaatgctgg cgtcgcaacg tcgaatcggg aacggtaggc cttcggcgtc
     1201 acgccgaacc gacgctcgaa tgctcggcgg aacacatcct cgttctggta acccaccgac
     1261 cgcccgaccg cggcgatgct cacccgttgc gcggcgagcc gccggctcgc ttcggccatc
     1321 cgcatctcct cgacgaacac cgcgggggtg acgccgaagc gccccttgaa ctcgcgcgag
     1381 aagtgacgaa cgctcatgca ggcacgcgcg gccatggact ccacggaaat aggtgcgcgc
     1441 aggtgcgact gcacccacgc cgcgaggtcg gcaaagcggt cggcggcggc gaactggaag
     1501 cgcagcggct ccgagaattg attctgcccg cctgggcgct tgtagtacac gaccatctcg
     1561 cgggcgacgg cgagtgcggc gttcggcccg caatcctcct cgatgagcgc gagggccagg
     1621 tcgattcccg cggtgatacc ggcggacgag tagaagggac cgtccttgag atagaccgca
     1681 tccggatcga cgctcagctt cgggaaccgc tgcctcacgt cccgtacggc actccagtgc
     1741 gtggcgacgc gccggccgtc cagcaatccg cttggcgcga ggccatacac gccggtgcag
     1801 acgctcgcga tgcggcggat gcgatgcgcg cgacctgcga tccactccgc cgctcgctcg
     1861 ccattgccgg atgcgcgcag tccgctgccc ccggggacga tgagcgtatc cagcggcggt
     1921 gccgagtcga gatcgcaatg cgcggtgaac atcacgccgg agctcgcggt gaacttcctt
     1981 ccgcgcaggc cgatgacgac gatctcgtag ggtcgtccgt tcacgccacc ctcgtcgagc
     2041 gccgccggag gcggcgtcac gccgtatgcg cccggaggaa agacgtccgg cgtgaaagcg
     2101 tcggatgcaa acgcgtcgca cggaccgatg aagtccagcg cctgcacgcc gtcgaacccg
     2161 agcacaccaa ttcgccgtcg ctccatgccc ggaagctggc aggcgcgcgc gatggccgca
     2221 acgacaaatc accgacgatt tcggccagca gcgcttaccg tgcggcgtgg aacggccgcc
     2281 tctcagagcg gccggtag
//
LOCUS       DASSYW010000684         2055 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_558815, whole genome shotgun sequence.
ACCESSION   DASSYW010000684 DASSYW010000000
VERSION     DASSYW010000684.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2055)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2055)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2055
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_558815"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..824)
                     /locus_tag="VFN38_10910"
     CDS             complement(<1..824)
                     /locus_tag="VFN38_10910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012315.1"
                     /translation="MATPASGEADLTAVRTIPVAVRPNKVRAADFAQPPRGDLSFAAF
                     LRALPDVLVARDFLAVVDAIALAARRERGVVVMLGGHIVKTGLAPVLIELMRRRIVTH
                     VAMNGSAAIHDYEVARFGATSEDVAAGLKDGTFGMAEETGRGLNEAFVEGMRREWGMG
                     ESVARGLEALAGREPIAHPELSVLLNAHRLGVPATVHAALGAEIIHQHPAANGAAIGD
                     TSHRDFRRLAHSLRTLDDGGVVLNLGSAVIMPEVFLKALTIARNLGGGRPQGFTSV"
     gene            complement(824..1606)
                     /locus_tag="VFN38_10915"
     CDS             complement(824..1606)
                     /locus_tag="VFN38_10915"
                     /inference="COORDINATES: protein motif:HMM:NF022750.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3108 domain-containing protein"
                     /protein_id="HET9012316.1"
                     /translation="MTAALRRLVRHTGALALLVAMPVAAQDRDGGAIPVPFGVGERLE
                     YDVKFGKLRVGSGSMEVAGVQDVRGRSTWHTIFQVRGGTFFYRVNDQYESWIDRYTGN
                     SLRFRQDLNEGRRDVERAFEIYPERGVFQESGEDTVQVSVKNPLDDGSFLYFIRTIPL
                     AVGDTYTFERYFRPDRNPVTIKVLRKERISVPAGEFDAIVVQPVIKTPGIFSENGHAE
                     IWLSDDENRIMLQMKSGLSFGSLNLYLKSYRPAQAGATVRRP"
     gene            complement(1603..1890)
                     /locus_tag="VFN38_10920"
     CDS             complement(1603..1890)
                     /locus_tag="VFN38_10920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012317.1"
                     /translation="MRDPFATLRLFRVSVIRDMLKERGDAPLLEGDGWSANVDLLLRA
                     APHARRVETVELAPRYDVRERPSRIRPWADAMHLFRFARAARGRSVRAVRA"
     gene            complement(1845..>2055)
                     /locus_tag="VFN38_10925"
     CDS             complement(1845..>2055)
                     /locus_tag="VFN38_10925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012318.1"
                     /translation="TDQPESVPELVRRFDGGADVVVGERPADAVVAPQPVRALRRLAP
                     WVVRPFVTVPACATRSPRCGCSASP"
BASE COUNT          296 a          724 c          756 g          279 t
ORIGIN      
        1 tccacgctcg tgaacccctg aggcctgccg ccgccgaggt tgcgggcgat ggtgagcgcc
       61 ttgaggaaca cctcgggcat gatgacggcg ctgccgaggt tgagcaccac gccgccgtcg
      121 tccagcgtgc ggagcgagtg ggcgagccgg cggaagtcgc gatggctggt gtcgccgatc
      181 gccgcgccat tcgccgccgg gtgctgatgg atgatctcgg cgccgagcgc ggcgtgcacg
      241 gtggccggaa cgccgagccg gtgggcgttg agcagcaccg agagctccgg gtgggcgatc
      301 ggctctcggc cggccagcgc ctcgaggccc cgggcgaccg attctcccat cccccactcc
      361 cgccgcatcc cctcgacgaa ggcctcgttg agcccacgcc cggtctcctc ggccatcccg
      421 aaggtgccgt ccttcaatcc cgcggccacg tcctccgatg tggctccgaa gcgcgcgacc
      481 tcgtagtcgt ggatcgcggc ggagccgttc atcgcgacgt gcgtgacgat acgccggcgc
      541 atcagctcga tcagcaccgg tgcgaggccc gtcttcacga tgtggccgcc gagcatcacg
      601 accacgccgc gctcgcggcg tgcggccagc gcgatcgcgt cgacgacggc gaggaagtcg
      661 cgcgccacca gcacgtcggg cagggcacgc aggaaggcgg cgaagctgag gtcgccgcgc
      721 gggggctgcg cgaagtccgc ggcgcgcacc ttgttcggac gcaccgcgac gggaatggtg
      781 cggacggccg tcaggtccgc ctcgccgctc gccggcgtgg ccactatggg cggcggaccg
      841 tcgccccggc ctgggctggg cggtacgatt tcagatagag gttcagggag ccgaacgaga
      901 ggccggactt catctgcagc atgatgcggt tctcgtcgtc cgaaagccag atctcggcgt
      961 ggccgttctc ggagaagatg ccgggcgtct tgatgacggg ctgcacgacg atcgcgtcga
     1021 actccccggc gggcacgctg atgcgctcct tgcgcagcac cttgatggtg acgggattgc
     1081 ggtccggacg gaagtagcgc tcgaaggtgt aggtgtcgcc gacggcgagc gggatggtgc
     1141 ggatgaagta caggaacgag ccgtcgtcga gcgggttctt cacgctcacc tgcacggtgt
     1201 cctcgccgct ctcctggaag acaccgcgct ccggatagat ctcgaacgcg cgctccacgt
     1261 cgcggcgccc ctcgttgagg tcctgccgga accggagcga gttgcccgtg tagcggtcga
     1321 tccagctctc gtactggtcg ttgacgcgat agaagaaggt gccgccgcgc acctggaaga
     1381 tcgtgtgcca ggtggagcgt ccgcgcacgt cctgcacgcc ggcgacctcc atggagccgg
     1441 agccgacgcg cagcttgccg aacttcacgt cgtactcgag ccgctcgccg acgccgaacg
     1501 gcaccgggat ggccccgccg tcgcggtcct gcgccgcgac gggcatggcg acgaggagcg
     1561 cgagtgcgcc ggtgtggcgc acgaggcgac gcagcgccgc cgtcatgcgc gcaccgcccg
     1621 cacgctgcgg ccgcgcgcgg cgcgcgcgaa gcggaagagg tgcatcgcgt ccgcccacgg
     1681 ccggatgcgc gagggccgct cgcgcacgtc gtagcgcggc gcgagctcca ccgtctcgac
     1741 gcgccgcgcg tgcggcgccg cacggagcag caggtcgacg ttggcgctcc agccgtcgcc
     1801 ctcgagcagg ggcgcatcgc cgcgctcctt gagcatgtcg cggatcacgg agacgcggaa
     1861 cagccgcagc gtggcgaacg ggtcgcgcac gccgggacgg tgacgaacgg ccgcacgacc
     1921 cagggcgcga gccggcgcag cgcgcgcacc ggctgcggcg ccaccaccgc gtcggcgggg
     1981 cgctcgccca ccacgacgtc ggcgccgccg tcgaaccgcc ggaccagctc gggcacgctc
     2041 tccggctggt cggtg
//
LOCUS       DASSYW010000685         2370 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_909939, whole genome shotgun sequence.
ACCESSION   DASSYW010000685 DASSYW010000000
VERSION     DASSYW010000685.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2370)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2370)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2370
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_909939"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..298
                     /locus_tag="VFN38_10930"
     CDS             <1..298
                     /locus_tag="VFN38_10930"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HET9012319.1"
                     /translation="MSHGRKSWRGWLEWWPATVIVTLWGTLSPRRRAMGYRVQKLRIP
                     HQDWFRDDFQALLELLREGKIHPVVAERLPLSEARRAHEMLESSAAKGKLVLVP"
     gene            complement(320..850)
                     /locus_tag="VFN38_10935"
     CDS             complement(320..850)
                     /locus_tag="VFN38_10935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012320.1"
                     /translation="MLKRLKSHVTYANVVATMALFIALGGVSWAAVTLPRNSVGTKQI
                     KRNAIRENDIRKGAVTSYGIKDHTIQNVDLAGGPLAFTYRREVQTNIGNNVLAEARPS
                     CDQGERLVGGGGGFLNDAGTLYALDGTLSTNGPASSSAPVADGERANSVANWHVSGRN
                     NSGGQRDFVGYAICLK"
     gene            968..1546
                     /locus_tag="VFN38_10940"
     CDS             968..1546
                     /locus_tag="VFN38_10940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012321.1"
                     /translation="MKRITRHLRGNAVAYLALFIALGGTSYAASQLTGDDIRNSSLTG
                     ADIASSSVKGGDIVNSSLAGRDVKDKTLTGADVLDGSLTGADLKPGEVAPHALFAVVD
                     NDDGTPAVARQFGATGVTDAAPGVVDVEFNQNVTTCAFTATQGTNDNNPSDNDYAVVD
                     SAGANEPDRVRVRTFDAAGQPQDDDFHLVVTC"
     gene            1640..>2370
                     /locus_tag="VFN38_10945"
     CDS             1640..>2370
                     /locus_tag="VFN38_10945"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HET9012322.1"
                     /translation="MEAAARTGTSSNGKADVNPPLESFNPATGERIGAVPTLRPEQVQ
                     AVVDDVAEVQPFWAQLPLSDRARYMRRTAQVLIDNLDELTSLLTREQGKPRSESYAME
                     LLPTIDGLHWIADHGEELLSDEKIPHPQIFWKQKKSWFTYEPLGVVGVIAPWNYPWSI
                     PFGEVAIALMCGNGVVLKPASLTPLIGDRIQWAFERAGLPEGIIRTVHGGGSVGNALV
                     ESSAAKIFFTGSVGVGRRVGTACAER"
BASE COUNT          372 a          832 c          819 g          347 t
ORIGIN      
        1 gatgtcgcat ggccgcaaga gctggcgcgg gtggctggag tggtggccgg cgacggtgat
       61 cgtcacgctc tggggaacgc tctcgccgcg gcggcgggcg atgggctatc gggtccagaa
      121 gctgcgcatc ccgcatcagg attggttccg ggacgacttc caggctctgc tcgagctgct
      181 tcgcgagggc aagatccacc cggtcgtggc cgagcgcctg ccgctctccg aggcccggcg
      241 cgctcacgag atgctcgaga gctcggcggc gaagggaaag ctcgtgctcg tgccctaggc
      301 cgccgagcgc cgcttgcgct cacttcaggc agatcgcgta ccccacgaag tcgcgctggc
      361 cgccggagtt gttcctcccc gagacgtgcc agttggcgac gctgttcgcg cgctcgccgt
      421 ccgccaccgg ggccgacgac gacgccgggc cgttggtgga gagcgtgccg tcgagggcgt
      481 acagggtgcc ggcgtcgttg aggaagccgc cgccaccgcc cacgaggcgc tcgccctggt
      541 cacacgacgg cctcgcctcg gccaacacgt tgttcccgat gttggtctgc acctcgcgcc
      601 ggtaggtgaa cgcgagcggg ccgccggcga ggtccacgtt ctggatcgtg tggtccttga
      661 tgccgtagct cgtcacggct cccttgcgga tgtcgttctc cctgatggcg tttcgcttga
      721 tctgcttcgt ccccacgctg tttcgcggca gcgtcaccgc cgcccaggag acgcccccga
      781 gcgcgatgaa cagcgccatc gtggccacca cgttcgcgta cgtgacgtgc gacttcagcc
      841 tcttcagcat ccgggtcccc cttctcgctt gatggcactc ccgcccgtaa gagcgaccct
      901 aatccgcaac tctcgccgcc gccagttgtc cgaaaaggga caccctgaac ccgaaaaagg
      961 ggaccacatg aagaggatca cacgccatct gcgcggcaac gccgtcgcct acctggcgct
     1021 gttcatcgcg ctcggaggca cgtcgtacgc cgcctcccag ctcaccggcg acgacatccg
     1081 caacagctcg ctcacgggcg cggacatcgc cagcagctcg gtgaagggcg gcgacatcgt
     1141 gaactcgtcg ctggccggcc gcgacgtgaa ggacaagacg ctcaccggtg ccgacgtgct
     1201 cgacggctcg ctcacgggcg ccgacctgaa gcccggcgag gtggccccgc acgcgctgtt
     1261 cgccgtggtg gacaacgacg acggcacccc ggctgtggcg cggcagttcg gcgcgaccgg
     1321 cgtgaccgac gcggctccgg gcgtcgtcga tgtcgagttc aaccagaacg tcacgacctg
     1381 cgccttcacg gccacgcagg gcacgaacga caacaacccg tcggacaacg actacgcggt
     1441 ggtggactcc gcgggcgcca acgagccgga ccgcgtccgc gtgcgcacgt tcgacgcagc
     1501 cggacagccg caggacgacg acttccacct ggtcgtcacc tgctagctcg caaccgatag
     1561 atggaccggc ggcggccacc cgcgccgccg ccgggctcca tcggccacaa tgcgcgctga
     1621 cgccagccag gaggcacagg tggaagcagc cgcgcgcaca gggacgagca gcaacggcaa
     1681 ggccgacgtg aacccgccgc tcgagtcgtt caaccccgcg acgggggagc ggatcggcgc
     1741 cgtgccgacg ctcaggccgg agcaggtgca ggcggtggtg gacgacgtgg ccgaggtgca
     1801 gccgttctgg gcgcagctgc cgctctcgga ccgggcgcgc tacatgcgcc gcaccgcgca
     1861 ggtgctgatc gacaacctcg acgagctcac ctcgctgctc acgcgcgagc agggcaagcc
     1921 gcgcagcgag tcgtacgcga tggagctgct gcccacgatc gacgggctgc actggatcgc
     1981 cgaccacggc gaggagctcc tgagcgacga gaagatcccc cacccgcaga tcttctggaa
     2041 gcagaagaag tcgtggttca cgtacgagcc gctcggcgtg gtgggcgtga tcgcgccgtg
     2101 gaactacccg tggtcgatcc cgttcggcga ggtggcgatc gcgctgatgt gcggcaacgg
     2161 cgtggtgctg aagcccgcgt cgctcacgcc gctgatcggc gaccggatcc agtgggcttt
     2221 cgagcgcgcc gggctgcccg aggggatcat ccgcaccgtg cacggcggcg ggtccgtcgg
     2281 caacgcgctc gtcgagtcga gcgcggccaa gatcttcttc accggctcgg tgggcgtggg
     2341 ccggcgcgtc ggcaccgcat gcgccgagcg
//
LOCUS       DASSYW010000686         2029 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_634526, whole genome shotgun sequence.
ACCESSION   DASSYW010000686 DASSYW010000000
VERSION     DASSYW010000686.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2029
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_634526"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(23..1468)
                     /locus_tag="VFN38_10950"
     CDS             complement(23..1468)
                     /locus_tag="VFN38_10950"
                     /inference="COORDINATES: protein motif:HMM:NF012544.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HET9012323.1"
                     /translation="MSRSAVAADAATETVLPRTLGLRDLVLFNLVAVVGLRWLATAGK
                     AGPSALVLWILAAVFFFVPQGLVVTELSSRFPQEGGIYQWTKRALGEKHGYLCGWCYW
                     VCNVLYYPNLLISAAVIATFVVGKGESGLVNSWTYVLSATLVCLWLAVLLNIVGLGTG
                     KWLQNAGGIGTYIPGVILILLGGWAVVTGHPPANPITRQNIVPDLGHLPGLNLWASIA
                     FAFAGLELSSAMGGEVRNPRRTLPRAILISAPLIALVYILGTGALLWLIPTGEVNIVS
                     GFLQATAAGARDISPSLWWLAPLAAAAYTLGNIGGVGAWLTGPARVAFAIGLDRYFPP
                     AFGRVHPKWKTPYVAILVQAGLATLFLLLSVLGKGTTVEKAYLILLDTQLLIYFIPYV
                     YLFISFLIHRRTEAPAETVRVPGGRIGATAVGASGLVVTLFAMAVAMIPPGDDPQPML
                     FVIKVVGGALAFVAFGGMVYWRAQRRRPLAA"
     gene            complement(1488..>2029)
                     /locus_tag="VFN38_10955"
     CDS             complement(1488..>2029)
                     /locus_tag="VFN38_10955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012324.1"
                     /translation="IWGRDENFYEWASSEFVVWTYGLTVRPTDKLRVNATYNLQSFNR
                     RSDGSIVANNRIPRLKVEYQIARPVFVRLVGEYTTLYRDALRDEGRTGKPIITYDECA
                     GFAYQLTTSCQRSFFRGDFLFSYQPNPGTVLFVGYGAGYADTRTAAQPFEFPRSVGFR
                     GYNRTDDALFVKASYLFRL"
BASE COUNT          349 a          701 c          706 g          273 t
ORIGIN      
        1 ccgcgcgtcg ccggcgagcg cgtcaggcag cgagggggcg tcgccgctgt gcccgccagt
       61 agaccatccc cccgaaggcg acgaacgcga gcgcgccgcc gaccaccttg atcacgaaca
      121 gcatcggctg cggatcgtcg cccggtggga tcatcgccac cgccatcgcg aacagggtca
      181 cgaccagtcc gctcgccccc accgccgtcg cgccgatgcg gccgcccggc acgcgcaccg
      241 tctccgcggg ggcctcggtg cggcggtgga tcaggaacga gatgaacagg tagacgtacg
      301 ggatgaagta gatgaggagc tgcgtgtcga gcaggatgag gtacgccttc tccaccgtcg
      361 tccccttccc gagcaccgac agcagcagga acagggtggc gagccccgcc tgcacgagga
      421 tcgccacgta cggcgtcttc cacttcgggt gcacgcgtcc gaacgcgggg ggaaagtagc
      481 ggtccagccc gatcgcgaac gccacgcgcg cgggcccggt gagccacgcc cccaccccgc
      541 cgatgttgcc gagcgtgtag gcggccgcgg ccagcggcgc gagccaccag agcgacgggc
      601 tgatgtcgcg cgcgcccgcc gccgtcgcct ggaggaagcc ggagacgatg ttgacctctc
      661 ccgtcgggat cagccacagc agtgcgccgg tgcccaggat gtacaccagc gcgatgagcg
      721 gcgcggagat gaggatcgcg cgcggcaggg tgcggcgcgg gttgcggacc tcgcccccca
      781 tcgcgctcga cagctcgagc cccgcgaagg cgaaggcgat ggatgcccac aggttcagcc
      841 ccggcaggtg ccccaggtcg ggcacgatgt tctggcgcgt gatcgggttc gccggcggat
      901 gaccggtgac caccgcccag ccgccgagga ggatcaggat gacgccgggg atgtacgtcc
      961 cgatgccgcc ggcgttctgc agccacttcc ccgtccccag ccccacgatg ttcagcagca
     1021 ccgcgagcca caggcacacg agcgtggcgc tcagcacgta cgtccagctg ttcaccaggc
     1081 cgctttcgcc cttccccacc acgaaggtcg cgatcaccgc ggccgagatg agcaggttgg
     1141 gatagtacag gacgttgcac acccagtagc accagccgca caggtagccg tgcttctcgc
     1201 ccagggcgcg cttggtccac tggtagatgc cgccctcctg cgggaagcgc gacgagagct
     1261 ccgtcaccac cagtccctgc gggacgaaga agaacaccgc cgccaggatc cagagcacca
     1321 gcgcgctcgg tcccgccttc cccgccgtcg ccagccagcg cagcccgacg acggccacga
     1381 ggttgaacag gacgaggtcg cgcaggccga gggtacgggg caggacggtc tccgtcgccg
     1441 cgtcggcggc gacggcactg cgcgacatgt cggtcatccg gacctggtca gaggcggaag
     1501 aggtagctcg ccttcacgaa cagcgcgtcg tccgtgcggt tgtagccacg gaagccgacg
     1561 ctgcggggaa actcgaacgg ctgcgcggcg gtgcgggtgt cggcgtagcc cgcgccgtag
     1621 cccacgaaca gcaccgtgcc gggattgggc tggtacgaga agaggaagtc cccgcggaag
     1681 aagctgcgct ggcacgacgt cgtgagctgg taggcgaagc cggcgcattc gtcgtaggtg
     1741 atgatcggct tgcccgtgcg accttcgtcg cgcagcgcgt cgcggtacag ggtggtgtac
     1801 tcgccgacga gacgcacgaa cacgggacgg gcgatctgat actccacctt gaggcgcgga
     1861 atccggttgt tcgccacgat gctgccgtcg gagcgccggt tgaagctctg gagattgtac
     1921 gtcgcgttca cccggagctt gtcggtgggg cgcacggtca gcccgtacgt ccacaccacg
     1981 aactccgacg aggcccactc gtagaagttc tcgtcgcgac cccagatgt
//
LOCUS       DASSYW010000687         3084 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_147636, whole genome shotgun sequence.
ACCESSION   DASSYW010000687 DASSYW010000000
VERSION     DASSYW010000687.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3084)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3084)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3084
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_147636"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..327
                     /locus_tag="VFN38_10960"
     CDS             <1..327
                     /locus_tag="VFN38_10960"
                     /inference="COORDINATES: protein motif:HMM:NF015000.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HET9012325.1"
                     /translation="LEGYDGELAIHSFDHAMIRRVARLDPSLRLGILFDEPPADAAAS
                     MAASGALDVWPHWPLVTEALVSAVHDAGGRVIPWTVNDQRQALALAALGVDALCGDDV
                     RILAVE"
     gene            420..1874
                     /locus_tag="VFN38_10965"
     CDS             420..1874
                     /locus_tag="VFN38_10965"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HET9012326.1"
                     /translation="MRHSVIALAVALAASACASGRAQEATPATSPAPARPTDSVRTGP
                     MLGAVSTPNADPFPSTYRPFASRPTLIRNVTIMTAAGPTIRNGSVLLRDGKIVEVGTT
                     LAAPADALVIDGTGKYVTPGIIDTHSHIGAGGVPGDNGSQTNDVNEATNPVTAHVWVE
                     HSVWPQDPQFPRTLAGGVTTIQVLPGSANLIGGRSATLKVVPSRTVQGMKFPGAPYGL
                     KMACGENPKRVYAQRGPATRMGNVAGYRAAWIQAEGYRRRWDKWNANHQGDPPTRDLG
                     LETLAEVLRGNILVHNHCYRADEMAQMIDIAREFGYRIRSFHHGVEAYKIADLLAQND
                     ISSSVWADWGGFKLEAADGVRGNPALLTRAGARTIIHSDDASGEQRLNQEAAKAMAEG
                     NRIGVPVSEDEAIKWLTINAAWALGIDGHTGSLQPGKNADVVLWSANPFSVYSRAEKV
                     WIDGAMMFDRLDPSQQWRTDFELGFVPVNRGGAK"
     gene            1874..>3084
                     /locus_tag="VFN38_10970"
     CDS             1874..>3084
                     /locus_tag="VFN38_10970"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HET9012327.1"
                     /translation="MRARPLFTAVLLSASASAAAAQTIAITGGRVHPVSGPMIENGTV
                     LIRDGSIVAVGASVAIPADAQRIDATGKVVTPGLVNAATQLTLVEIGAVGSTRESQAR
                     GREGVAAAFRPWEGLNPTSVLISPARNAGVTTVLLTPSGGLIAGQVGVVHLVPGTAAE
                     MVLKAPVAMVATLGPARGPNGSPRAETIMRLREILDDARVYRTRRADFERAQTRDFAA
                     GRLDLEALLPVLDGRLPMLVEADKASDIEAAMTLAKDYGVRLIIGGGAEAWQIADKLA
                     AARIPVLTGAMNNIPESFASLGQRQENAGILSKAGVQVTVIGNAGGGDEEAFNVRNVR
                     FEAGNAVAYGMDWNAALRAITLTPAETFGVADRVGSLAPGKLADVVIWSGDPLEFSTQ
                     PEHVFVRGREIR"
BASE COUNT          461 a         1126 c         1098 g          399 t
ORIGIN      
        1 ctggaggggt acgacggcga gctcgcgatc cacagcttcg atcacgcgat gatccggcgt
       61 gtggcgcggc tcgacccctc gctgcggctg gggatcctgt tcgacgagcc gccggcggac
      121 gccgccgcat cgatggccgc cagcggcgcg ctcgacgtgt ggccgcactg gccgctcgtc
      181 acggaagcgc tggtatcggc ggtgcacgac gcgggaggcc gcgtgatccc gtggacggtg
      241 aacgaccagc ggcaggcgct ggcgctcgcg gcgctcggcg tggacgccct ctgcggcgac
      301 gacgtgcgca tcctcgcggt ggagtgagcg gtctggccgc gggtcggcac cgggcatagc
      361 ttcccggcgc acttccccgc ccgcccgtcg tcaccctcca gcccaggaca gtccgcacga
      421 tgcgtcattc cgtcatcgcg ctcgccgtcg ccctcgccgc cagtgcctgc gcctccgggc
      481 gcgcgcagga agcgacgccg gccacgtcac cggcaccggc ccggccgacc gacagcgtca
      541 ggaccggccc gatgctcggc gccgtctcca cgccgaacgc cgatcccttc ccgagcacgt
      601 accggccctt cgcgtcgcgc cccacgctca tccgcaacgt caccatcatg accgcggcgg
      661 ggcccaccat ccgcaacggc agcgtgctcc tgcgcgacgg caagatcgtc gaggtgggga
      721 cgacgctggc ggcgccggcc gacgccctcg tcatcgacgg cacgggaaag tacgtgaccc
      781 cggggatcat cgacacgcac tcgcacatcg gtgcgggcgg cgtgccgggc gacaacggca
      841 gccagacgaa cgacgtgaac gaggcgacga acccggtgac ggcccacgtg tgggtcgagc
      901 actcggtgtg gccgcaggac ccgcagttcc cccgcacgct ggcgggcggc gtgacgacca
      961 tccaggtgct gcccggctcc gccaacctga tcggcggccg gagcgccacg ctcaaggtgg
     1021 tgccgtcgcg caccgtgcag gggatgaagt tccccggtgc gccctacggg ctcaagatgg
     1081 cgtgcggcga gaatcccaag cgggtgtacg cgcagcgcgg ccccgcgacg cgcatgggca
     1141 acgtcgccgg ataccgcgcg gcctggatcc aggccgaggg ctaccgccgc cgctgggaca
     1201 agtggaacgc gaaccaccag ggcgacccgc cgacgcgcga ccttggcctc gagacgctgg
     1261 ccgaggtgct ccgcggcaac atcctggtgc acaaccactg ctaccgcgcc gacgagatgg
     1321 cgcagatgat cgacatcgcc agggagttcg gctaccgcat ccgctccttc caccacgggg
     1381 tcgaggcgta caagatcgcc gacctgctgg cccagaacga catctcgtcg tcggtgtggg
     1441 ccgactgggg cgggttcaag ctcgaggcgg ccgacggggt gcgcggcaat cccgccctgc
     1501 tcacgcgcgc gggcgcgcgc accatcatcc attccgacga cgcgtcgggc gagcagcggc
     1561 tgaaccagga ggccgcgaag gcgatggccg agggcaaccg catcggcgtg cccgtgtccg
     1621 aggacgaggc gatcaagtgg ctgacgatca acgccgcctg ggcgctgggc atcgacgggc
     1681 acaccggctc gctgcagccg ggcaagaacg ccgacgtggt gctctggtcg gccaatccgt
     1741 tcagcgtgta ctcgcgcgcc gagaaggtgt ggatcgacgg cgcgatgatg ttcgaccggc
     1801 tcgatccgtc gcagcagtgg cggaccgact tcgagctcgg attcgtgccg gtcaaccgtg
     1861 gaggagccaa gtgatgcgcg cacgtcccct gttcaccgcc gtcctgctgt cggcctccgc
     1921 ctccgccgcg gccgcgcaga ccatcgccat caccggcggg cgcgtgcacc cggtgagcgg
     1981 cccgatgatc gagaacggca cggtgctcat ccgcgacggc agcatcgtcg ccgtgggtgc
     2041 cagcgtcgcc attcccgccg atgcgcagcg catcgacgcc accggcaagg tcgtcacgcc
     2101 ggggctcgtg aacgccgcca cccagctcac cctcgtggag atcggagcgg tgggcagcac
     2161 gcgcgagagc caggcgcgcg gccgcgaggg cgtcgccgcg gcgtttcgcc cgtgggaagg
     2221 gctgaacccc acttcggtcc tcatctcgcc cgcgcgcaac gcgggcgtca cgaccgtgct
     2281 cctcaccccg tccggcggct tgatcgccgg gcaggtcggc gtcgtccacc tggtgccggg
     2341 caccgccgcg gagatggtgc tcaaggcgcc ggtggccatg gtagccaccc tcggtccggc
     2401 tcgcgggccc aacgggtcgc cccgcgccga gaccatcatg cggctccgcg agatcctgga
     2461 cgacgcgcgc gtgtatcgca cgcgccgcgc ggacttcgag cgggcgcaga cgcgcgactt
     2521 cgcggccggc cgcctcgacc tcgaggcgct gctgccggtg ctcgacggtc ggctcccgat
     2581 gctcgtggaa gccgacaagg cgagcgacat cgaggccgcg atgacgctgg cgaaggacta
     2641 cggcgtccgc ctcatcatcg gcgggggggc cgaggcgtgg cagatcgccg acaagctggc
     2701 ggcggcgcgc atcccggtgc tcaccggcgc gatgaacaac atcccggaga gcttcgcctc
     2761 cctgggccag cggcaggaga acgccggcat cctgagcaag gcgggcgtgc aggtgaccgt
     2821 gatcggcaac gcgggcggcg gtgacgagga agctttcaac gtgcgcaacg tgcgcttcga
     2881 ggccggcaac gccgtggcct acggcatgga ctggaacgcc gcgctgcgcg ccatcaccct
     2941 cacccccgcc gagaccttcg gcgtcgccga ccgcgtcggc tcgctggcgc ccggcaagct
     3001 ggccgacgtc gtgatctgga gcggcgatcc cctggagttc tccacccagc ccgagcacgt
     3061 gttcgtgcgg ggacgcgaga tccg
//
LOCUS       DASSYW010000688         2601 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1553588, whole genome shotgun sequence.
ACCESSION   DASSYW010000688 DASSYW010000000
VERSION     DASSYW010000688.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2601)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2601)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2601
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1553588"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..563)
                     /locus_tag="VFN38_10975"
     CDS             complement(<1..563)
                     /locus_tag="VFN38_10975"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HET9012328.1"
                     /translation="MSADVTRREFLATVAAAQGAFVLGFWFPDKASAQTPAPAGAAWY
                     QDAATPEINAWIVIAPDDIVTIRIAQTELGQGVWTSNAMMVCEELQCDWSKVRPQYAS
                     ANRDARERAPEWTLTVPGNGATDPKGGGEPTFGNRDRTGVSGIPDSLYRRMRTNAASS
                     VKDGRYYLQLAGAEARERLLLAAAQGA"
     gene            complement(568..1089)
                     /locus_tag="VFN38_10980"
     CDS             complement(568..1089)
                     /locus_tag="VFN38_10980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HET9012329.1"
                     /translation="MPFDLTVNGTPHRVDADLQTPLLWVIRDHVGLTGTKFSCGIGQC
                     GACTVHVDGRAVRSCSVPASTAAGKRVTTIEGVSPDGTHPIQIAWKEFDTPQCGYCQS
                     GMIMSALALLRDRPQPTDAEIDARVTNACRCGTYHRVRKAIHMAADLMKGRSKDLQLR
                     GQGRPEGLQLRQR"
     gene            1273..>2601
                     /locus_tag="VFN38_10985"
     CDS             1273..>2601
                     /locus_tag="VFN38_10985"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HET9012330.1"
                     /translation="MADALWQDLRYAIRSLRQRPLVSAVAIASLSLGLGVNTAIFSMF
                     DSLLLSRLPVPAPGELVNVLSPGPKPGSRSASRSGRVEALFSHPLFRDLERVQSGSLQ
                     VAAHRDFEVNVSHRGQTVTAVGLLVSGSYFPVLRLAPARGRLLDARDDAPDAAPVAVL
                     SYDYWTTRFGSDPSVVGDGVVLNGEPMTIAGVAPAGFSGTTTGQRPDVFVTLVHAQRA
                     PAVVDSDRKNHWLYVFARLPQGLRRDQAEQRINVPFAALIRDVEFPALRGSMSDRDRD
                     AFQQRRLVLEDGARGQDAERRALQGLLALLFAVTGVVLAIACANVANLLLARGAARTA
                     EVSVRVALGAPKRALLRLLLVEAGMLGLLGAAGAMAAAWLTIAGFKAVTPAGGDAAKL
                     TFAVDGAVLLYAIVLGIAVSLLTGLVPALQLVASAGSPALHAGSRASSPSS"
BASE COUNT          341 a          921 c          917 g          422 t
ORIGIN      
        1 aacgcgccct gcgcggcggc gagcaggagc cgctcacgcg cctcggcgcc ggccaactgc
       61 aggtagtagc gcccgtcctt caccgacgac gccgcattgg tgcgcatccg gcgatacaag
      121 ctgtcgggaa tgcccgacac ccccgtgcgg tcgcggttgc cgaacgtggg ctcgccgcca
      181 cccttcggat cggtggcgcc gttacccggc acggtcagcg tccactcggg agccctttcg
      241 cgcgcgtcgc gattggccga ggcgtactgc ggccgcacct tcgaccaatc gcactgcagc
      301 tcctcgcaca ccatcatggc gttcgaggtc cacacaccct ggccgagctc ggtctgcgcg
      361 atgcggatcg tcacgatgtc gtctggcgcg atcacgatcc acgcgttgat ctcgggcgtg
      421 gcggcatcct gataccaggc ggcgcccgcc ggcgcgggcg tctgggcgga cgctttgtcg
      481 ggaaaccaga agccgagaac gaacgcgccc tgcgcggcgg cgaccgtcgc caggaactcg
      541 cggcgcgtga cgtcggcgct catgtcgtca ccgctgccgt agctgcaggc cttcaggcct
      601 gccctggcct cgtagctgca ggtctttaga cctgcccttc atcagatcgg ccgccatgtg
      661 aatcgccttg cggacgcgat gataggtgcc gcagcggcac gcgttcgtga cgcgcgcatc
      721 gatctcggcg tcggtcggct gcgggcggtc gcgcaagagc gcaagcgcgc tcatgatcat
      781 ccccgactgg cagtagccgc actgcggcgt gtcgaactcc ttccaggcga tctgaatcgg
      841 gtgggtgccg tcgggcgaca cgccttcgat ggtcgtcacg cgcttgccgg ccgcggtcga
      901 ggcggggacg ctgcacgagc gcacggcgcg gccgtccacg tgcacggtgc acgcgccgca
      961 ctggccgatg ccgcagctga acttggtccc agtgagcccg acgtgatcgc ggatgaccca
     1021 cagtagcggc gtctgcagat cggcgtcgac gcggtgcggg gttccgttga cggtcaggtc
     1081 gaacggcatg cgtcctccgg ttgggcggca ttgtagtcgg agccgcgccg gcgtgactgt
     1141 ccggtcgggg gacgccctgt ccccggtccg aacagtcgtc cccgcacacc gcgagtgacc
     1201 ggcagaaatc acgccatttc cacgcgcgtc tccggcgtcc ggctggcatc cgccttgtga
     1261 gacagttggc gcatggcgga cgccctgtgg caggacctcc gatacgcgat ccgatcactg
     1321 aggcagcggc cgctcgtgtc ggccgtcgcc atcgcgtcgc tgtcgctcgg tctcggcgtc
     1381 aacacggcca tcttctccat gttcgacagc ctgctgctca gccggctgcc ggtgccggca
     1441 ccgggtgagc tcgtcaacgt attgtcgcca ggccctaagc ccggctcccg atcggcgagc
     1501 cgttccggcc gcgtggaggc gctcttcagc catccgctgt tccgcgatct cgagcgggtg
     1561 cagagcgggt cgctgcaggt ggccgcccat cgcgacttcg aggtcaacgt ctcgcaccgc
     1621 gggcagaccg tgacagccgt ggggctgctc gtgtcgggaa gctacttccc cgtgctgcgg
     1681 ctggcaccgg cacgcggccg gctgctcgac gcgcgcgacg atgcgcccga cgcggccccg
     1741 gttgccgtct tgagctacga ctactggacg acgcgcttcg gcagcgaccc ctccgtcgtg
     1801 ggcgacggcg tcgtgctcaa tggcgagccg atgacgatcg ccggtgtcgc gccggctgga
     1861 ttctcgggca cgaccacggg acagcggccc gacgtgttcg tcacgctggt gcacgcgcag
     1921 cgtgcgcccg ccgtggtcga ttcggacagg aagaaccact ggctctacgt gttcgcacgg
     1981 ctgccgcagg ggctcagacg cgaccaggcc gaacagcgca tcaacgtgcc cttcgccgcg
     2041 ctgattcgcg acgtcgagtt ccccgcgctt cgcggcagca tgagcgaccg cgatcgcgac
     2101 gcgttccagc agcgacgcct cgtgctggaa gacggcgccc gcggacagga cgcggagcgc
     2161 cgggccttgc aggggctgct tgcgctgctg ttcgccgtga ccggcgtggt gctcgccatc
     2221 gcgtgcgcca acgtggccaa tctgctgctg gcgcgcggcg cggcgcgcac cgccgaagtg
     2281 tctgtgcgcg tggcactggg ggcgccgaag cgggcgctgc tgcggctgct gctcgtcgag
     2341 gcggggatgc tggggctgct cggtgccgcc ggggcgatgg ccgccgcgtg gctgacgatc
     2401 gccggattca aggccgtcac gccggccggc ggcgacgccg cgaagctgac gttcgccgtc
     2461 gacggcgccg tgctgctcta tgcgatcgtg ctcggcatcg cagtcagcct gctgaccggg
     2521 ctcgtgccgg cgctccaact cgtcgcatcc gccggcagcc ccgcgctgca cgcggggtcg
     2581 cgcgcgagct cgccgtcgtc g
//
LOCUS       DASSYW010000689         2032 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1566365, whole genome shotgun sequence.
ACCESSION   DASSYW010000689 DASSYW010000000
VERSION     DASSYW010000689.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2032)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2032)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2032
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1566365"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..664
                     /locus_tag="VFN38_10990"
     CDS             <1..664
                     /locus_tag="VFN38_10990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012331.1"
                     /translation="LTRAGPGLDPAAGRKPRLGRWRYVVETTDLARFGRLVWYEAQRL
                     GAERVSRILVIADGAAWIWKLADRSFLKHQAILDFWHAVQHLWTLGDARFGDGDPRVK
                     AWVGRAKSRLRQGEIERLLVGWERVAPADAAVWAEELTYFRKQAPRMAYDVARQAGMP
                     IGSGAVESANRHVVGLRVKQAGMHWTEPGLRGVLALRSLLRSGDWDATWDAHPLPLKL
                     AS"
     gene            complement(876..1901)
                     /locus_tag="VFN38_10995"
     CDS             complement(876..1901)
                     /locus_tag="VFN38_10995"
                     /inference="COORDINATES: protein motif:HMM:NF023431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3500 domain-containing protein"
                     /protein_id="HET9012332.1"
                     /translation="MAVDLSVSYRAPATARAMAEAATRFVDSLNPAQRKEATFPFAGD
                     ERYTWNYRPTQGGDSRVFDRNGLRIINMTSEQQQLALALVDAGMSKRSAEQARWIMEL
                     ENVLREHERADGRIFLGVRDRELYWFSIFGEPGGAAPWAWRAGGHHIGFHFTIVDREM
                     VSATPCFLGANPAQVRFGPHEGKRALPEEEDLPRALVQSLEGAARQKAIFAETAPADI
                     LTDAYRSLDRFILPRGVSYRDLGGEQRDKLVGVIKHYISRVSDEIAAQEWDKIERAGL
                     DGITFAWGGPVEKGAGHYYAIQRPTFIVEYDNTQNNSNHIHSVWRTFDGDWGEDILAA
                     HYAASHS"
BASE COUNT          289 a          723 c          702 g          318 t
ORIGIN      
        1 gctcacccga gccgggccgg gcctggaccc ggccgcggga cggaagccgc gcctggggcg
       61 ctggcgctac gtggtcgaaa cgaccgacct cgcgcggttc ggccggctgg tctggtacga
      121 ggcccaacgc ctgggggccg agcgcgtctc gcgcatcctg gtgatcgccg atggcgccgc
      181 ctggatctgg aagctggccg atcgctcctt cctcaagcac caggccatcc tggacttctg
      241 gcacgccgtc cagcatctct ggaccctcgg tgacgcccgg tttggggacg gcgatccccg
      301 cgtcaaagcc tgggtcgggc gtgccaagag ccgcctgcgc cagggtgaga tcgagcggct
      361 cctggtcggc tgggagcgcg tcgcgcccgc cgacgcagcg gtctgggccg aggagttgac
      421 ctacttccgc aagcaggccc cgcgcatggc ctatgacgtc gcacgccagg ccgggatgcc
      481 gatcggcagt ggcgccgtcg agagcgccaa ccgccacgtc gtcggcctcc gcgtcaagca
      541 ggccggcatg cattggaccg agccaggcct ccgcggcgtc ctcgccctcc gttccctcct
      601 ccggagcggc gactgggacg ctacctggga cgctcacccc ctcccgctca aacttgccag
      661 ctaacaaaag ccacgtgcgc ccagctggag ggccaggccg cgaccggctc gcggatccag
      721 cgcttcccga acctgcgcct gacggtgccg gccgggacgc tgacgcggcg cccgggtatg
      781 cagatccgga gcctgggtcg cctgccggtc gcgttctgag tacagcaaga acgggcgggg
      841 agaacccacc cgttcaggat gctgctcgag gccggtcagc tgtggctggc ggcgtagtgg
      901 gcggcgagga tgtcctcgcc ccagtcgccg tcgaacgtcc gccagaccga gtggatgtgg
      961 ttcgagttgt tctgggtgtt gtcgtactcg acgatgaatg tcgggcgctg gatcgcgtag
     1021 tagtggccgg cccccttctc gacggggccg ccccaggcga acgtgatccc gtcgagcccg
     1081 gcccgctcga tcttgtccca ctcttgcgcg gcgatctcgt cgctgacccg gctgatgtag
     1141 tgcttgatga cgccgaccag cttgtcgcgc tgctcgccgc cgagatcgcg gtatgagacg
     1201 ccgcgcggca ggatgaagcg atcgagcgag cggtaggcgt cggtcaggat gtcggccggg
     1261 gccgtctcgg cgaagatggc cttctgtcgc gcggcgccct cgaggctctg gaccagcgcc
     1321 cgcggcagat cctcctcctc gggcagggcg cgcttgccct cgtgcggccc gaagcgcacc
     1381 tgggccgggt tcgcgcccag gaagcacggc gtcgccgaga ccatctcacg gtccacgatc
     1441 gtgaagtgga agccgatgtg gtgaccgccg gcccgccagg cccacggcgc cgcgccgcca
     1501 ggctcgccga agatgctgaa ccagtacagc tcgcggtccc gcacgccgag gaagatccgc
     1561 ccgtcggccc gctcgtgctc gcgcaggacg ttttcgagct ccatgatcca gcgggcctgc
     1621 tcggcgctgc gcttgctcat cccggcgtcg accagcgcca gcgcgagctg ctgctgctcg
     1681 ctggtcatat tgatgatccg cagcccgttg cggtcgaaga cgcgcgagtc gccaccctga
     1741 gtcgggcgat agttccaggt gtagcgctcg tcgcccgcga acgggaacgt cgcctccttg
     1801 cgctgggccg gattcagcga gtcgacgaac ctggtcgcgg cctcagccat cgcgcgggca
     1861 gtcgccggcg cgcggtacga taccgaaaga tcgacggcca tcggagagct ccctcctgtc
     1921 gtgtggcgca caccgccaca ttgcgatgcc tggtatccac agtgtagccc ggtcaggcca
     1981 gcacgcgcgg cagcacctcg cgcatcacgc gctccaactg cccgaactgg tc
//
LOCUS       DASSYW010000690         2006 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1543307, whole genome shotgun sequence.
ACCESSION   DASSYW010000690 DASSYW010000000
VERSION     DASSYW010000690.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2006)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2006)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2006
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1543307"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..771
                     /locus_tag="VFN38_11000"
     CDS             <1..771
                     /locus_tag="VFN38_11000"
                     /inference="COORDINATES: protein motif:HMM:NF020091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003852 - 2-isopropylmalate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-isopropylmalate synthase regulatory
                     domain-containing protein"
                     /protein_id="HET9012333.1"
                     /translation="KLTELSRAVSEIANIRPRAHAPYVGRSAFAHKGGMHVAAVEKVT
                     HSYEHVAPERVGNRRHIVVSELAGRGNVRMRSNELGVDVQGNERVLLEKVKELESQGY
                     QFEAAEGSFELLGRRSAPGYKPPFEVLDVVVISERRRGNSMFAEATVKVRIGDETVHT
                     VAEGDGPVHALDGAFHKALNPHFPIAKDIHLVDYKVRILDPEAATGAKTRVLIEAARG
                     EERWSTIGVSSNIIEARAVALADGLELPLARARAASAS"
     gene            819..1328
                     /locus_tag="VFN38_11005"
     CDS             819..1328
                     /locus_tag="VFN38_11005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012334.1"
                     /translation="MSRVAGTVAKVVLFVVVVGVATVAFSKDVRRRISQHWAMETCPA
                     HIEADVRLIAPLADPKIDHCEGTPTRATCSLETTERSGRKTGVVKDWDCSKRHISDRF
                     SRELMDIAMKRMAGKGEAVKDRERLEDVQEEFLQSIRYVTEKLRERRELLGETDASPY
                     GFGLFGLQR"
     gene            1510..>2006
                     /locus_tag="VFN38_11010"
     CDS             1510..>2006
                     /locus_tag="VFN38_11010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012335.1"
                     /translation="MRISLARTLSLLPLLAAPLAGCTDDPIDPGNLADRVALYSREMV
                     HQSGGGVAFTQEDTSGLNTIANGMQGAGDGLAGAMPAPMPAPMSSAMNDAPLLAAMAG
                     MPSMLTTEEQFDETADKLKIWVRERVLADANLESKTDDEAIYRLHPDPTCRRIPSADD
                     PPGTIP"
BASE COUNT          340 a          681 c          698 g          287 t
ORIGIN      
        1 aagctgaccg agctgtcgcg cgcggtcagc gagatcgcca acatccgtcc gcgcgcgcac
       61 gcgccctacg tcgggcgatc cgcgttcgcg cacaagggcg gcatgcacgt cgccgcggtc
      121 gagaaggtca cgcacagcta cgagcacgtc gcgcccgagc gcgtcggcaa ccgccggcac
      181 atcgtcgtgt cggagctggc cggccgcggc aacgtccgca tgcgctcgaa cgagctcggc
      241 gtcgacgtgc agggcaacga gcgggtgctg ctcgagaagg tgaaggagct ggagagccag
      301 ggctaccagt tcgaggcggc cgagggatcg ttcgagctgc tgggccggcg cagcgcgccc
      361 ggctacaagc cgcccttcga ggtgctggac gtcgtcgtga tctcggagcg gcggcgcggc
      421 aactcgatgt tcgccgaggc gacggtgaag gtccgcatcg gcgacgagac ggtgcacacc
      481 gtcgccgagg gggacgggcc ggtgcacgcg ctcgacggcg cgttccacaa ggcgctgaac
      541 ccgcacttcc cgatcgcgaa ggacatccac ctggtcgact acaaggtccg catcctcgat
      601 cccgaggcgg cgaccggcgc caagacgcgc gtgctgatcg aggcggcgcg tggcgaagag
      661 cggtggagca cgatcggcgt ctcctcgaac atcatcgagg ccagggccgt tgccctcgcc
      721 gacggcctgg agctgccgct ggcgcgcgcg cgcgccgcgt ccgcgagctg acgcgtcccg
      781 ccgtttcagc aaccgcggcc ccggtgtaac ctgggcgcgt gagccgggtc gccgggacgg
      841 tcgcgaaggt cgttctcttc gtcgtggtgg tgggcgtcgc caccgtcgcc ttcagcaagg
      901 acgtgcggcg gcggatctcc cagcactggg cgatggagac ctgccccgct cacatcgaag
      961 cggacgtgcg tttgatcgct ccgctggcag accccaagat cgatcactgc gaaggaaccc
     1021 cgacgcgcgc cacctgctcg ctcgagacca ccgaacgcag cggtcgcaag acaggggtgg
     1081 tcaaggactg ggactgctcg aagcgtcaca tctcggatcg tttcagccgc gagctcatgg
     1141 acatcgcgat gaaacggatg gccggaaagg gggaggcggt gaaggaccgc gagcggctgg
     1201 aggacgtcca ggaggagttc ctccaatcga tccggtacgt gaccgagaag ctgcgcgagc
     1261 ggcgagagct gctcggcgaa acggatgcgt ctccgtatgg attcggcttg ttcgggctgc
     1321 aacggtgact gacgccggcg tcagcttttg agcagcatct ggcgcacgtc gacatgacgc
     1381 ctgtcactcc gtctccagtg gatacgccta cttagccccg ccacggcggt ccgggacacc
     1441 tgtcatgccg attgcacatg gcagcgcccc gtcgtcacga aacgaaccca cgcccggagg
     1501 ccttccgtca tgcgtatctc ccttgcacgt accttgtcgc ttctgccgct tctggcggcg
     1561 ccgctcgctg gctgcaccga cgacccgatc gatcccggga acctcgccga tcgagtcgcg
     1621 ctgtactcgc gcgagatggt tcaccagtcg ggcggcggcg tggcgttcac gcaggaagac
     1681 acctccggcc tcaacacgat cgcgaacggg atgcagggcg cgggcgacgg cctggcgggc
     1741 gcgatgccgg cgcccatgcc ggccccgatg agcagcgcga tgaacgacgc ccccctgctg
     1801 gccgcgatgg cagggatgcc gtccatgctc acgaccgagg agcagttcga cgagacggcc
     1861 gacaagctga agatctgggt gcgcgagcgc gtgctcgccg acgccaacct ggaatcgaag
     1921 accgatgacg aggcgatcta ccggctgcac cccgatccga cctgccgccg gatcccgagc
     1981 gccgacgatc cgcccggcac gatccc
//
LOCUS       DASSYW010000691         2983 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_710777, whole genome shotgun sequence.
ACCESSION   DASSYW010000691 DASSYW010000000
VERSION     DASSYW010000691.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2983)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2983)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2983
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_710777"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1134)
                     /locus_tag="VFN38_11015"
     CDS             complement(<1..1134)
                     /locus_tag="VFN38_11015"
                     /inference="COORDINATES: protein motif:HMM:NF024603.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HET9012336.1"
                     /translation="MPAARLALALAVLSTALSTLAGAQSPAPLRVIRSTPTGDAAPNA
                     EISVTFDRPVAGSLDRSIDATSIFRIEPAVAGRVEWRDPVTIRLRPTTRLVSGTRYAV
                     TIANTFRAMDGSALAEPYRYTFRAQGPRLLAGSPVSENERAEHVAPNQQFALVYSSAV
                     DLAKLSTAAYVELRATCGGQRVVRLRATSQRAIRDDDPWNFREAGGWQRDRSIDSLRR
                     VVQVAPESALPRACAGELVAPTEVEDEVLRTVARWPFDTYGDLRIALFGCGASTFCPS
                     GPLTVTFSNPVRGADVLRHVRLLPDAKFAIRDTLSEGTSWTLEARLQPHVTYAVAADT
                     AIRDVFGQRLVGNPAAAFRTTGYAPDIVHPFGRLLVERTGFRTL"
     gene            1305..1940
                     /locus_tag="VFN38_11020"
     CDS             1305..1940
                     /locus_tag="VFN38_11020"
                     /inference="COORDINATES: protein motif:HMM:NF024183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HET9012337.1"
                     /translation="MPNIPFTSNYTDLSSQRGYQFQFFCRKCGNGYMSTFEPNKLNAV
                     ASVANVAASLFGGIFGRAAQSASAIQSTVAGPQHDSALDAAVREISPLFKQCTRCGSW
                     VCEPVCWNKKAGLCEGCAPDLDEEIAAAQAQAARQQATDKARDVDYLGQRNLAQVVAP
                     ACPSCGAKTQGGRFCPECGTTLSAKRKCADCGAEADGNPKFCPECGKPYGR"
     gene            1942..>2983
                     /locus_tag="VFN38_11025"
     CDS             1942..>2983
                     /locus_tag="VFN38_11025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012338.1"
                     /translation="MIAEARRANAAFALFDASGAVARSGEAIAVVGDDALTVGPVTVS
                     FLDADSLRAADYRIELGLWPSGRLELSQLGRRFETFAAELRRIRNQARVAGVLAHGVA
                     MPETFSGALLADSRRCAADFLVFDTHVTVVPEDDDPWQVPLGAVTAVRFQPDPPAVLL
                     ETGAGLTTLGQLARRREECEAAIVERREAQRGLLAELTGQSGFSDGWGVARGEVRDFD
                     ALLERFTSADRTSCVHVLVAAATADPRLGFVQLLDPEPDVMPSPARLPEHWAAFLLVP
                     VGTLTVLEILAGPAAATYVFRGAIDAVNRDLQALHFRRAPLALTAEQAQLTPDNSYRL
                     ALRRLQPLQRLRA"
BASE COUNT          443 a         1029 c         1064 g          447 t
ORIGIN      
        1 gagcgtgcgg aaccccgtgc gctcgacgag caggcggccg aacgggtgca cgatgtccgg
       61 cgcgtacccc gtcgtgcgaa acgccgccgc gggattcccg accagtcgct ggccgaagac
      121 gtcgcggatg gcggtgtcgg cggcgacggc gtacgtcacg tgcggctgga ggcgcgcctc
      181 gagcgtccac gatgtccctt cggaaagcgt gtcgcggatc gcgaacttcg cgtccggcag
      241 gagcctaacg tggcgcagca cgtcggcccc gcgaacgggg ttcgagaacg tcaccgtcag
      301 tggacccgac ggacagaacg tgctcgcgcc gcagccgaac agcgcgatcc tgagatctcc
      361 gtaggtgtcg aacggccagc gggctaccgt gcgaaggact tcatcctcga cctccgtggg
      421 tgcgacgagc tcgcccgcgc atgctcgcgg cagcgcgctt tcgggcgcga cctgtacgac
      481 gcggcggagc gagtcgatcg agcggtcgcg ctgccaaccg ccagcctcgc ggaaattcca
      541 cgggtcgtcg tcgcgaatgg cacgctgcga cgtcgcgcgc aggcggacga cgcgctggcc
      601 gccgcacgtc gctcgcagct cgacgtacgc cgcggtcgag agcttcgcga gatcgaccgc
      661 gctgctgtac acgagcgcga actgctggtt cggcgcgacg tgctcggcgc gctcgttctc
      721 cgagacgggc gagcccgcca gcagccgcgg cccctgcgcc cggaaggtgt agcgatacgg
      781 ctcggcgagc gcgctgccgt ccatggcgcg gaacgtgttt gcgatcgtga ccgcataacg
      841 agtccccgac acgaggcgcg tggtcggacg cagccggatc gtcaccgggt cgcgccactc
      901 gacgcgtccc gcgaccgccg gctcgatgcg aaagatcgac gttgcgtcga tgctgcggtc
      961 aagcgacccc gccaccggcc ggtcgaacgt gacgctgatc tcggcgttag gcgcggcgtc
     1021 gccggtgggg gtggaccgga tgacgcggag cggcgcggga ctctgggcgc cggcgagggt
     1081 cgagagcgcc gtcgacagga cggcgagggc gagcgcgagg cgggcggcgg gcatcgtctt
     1141 ttccgaaagg ggcgaccagg acattatacc cctcgcgcgc ggttttgcct ccccacgtcg
     1201 gtgcgggcac ccgcgcggcc tgaacgccgc tccgctcggg atgacaaccg tctgcttgac
     1261 tccgatgcac gcgcgccgga gcttcatggc catcggagcg accaatgccc aacatcccgt
     1321 tcacgagcaa ctacaccgac ctctcctcgc agcgaggcta tcagttccag ttcttctgcc
     1381 ggaagtgcgg gaacggctac atgtcgacgt tcgagccgaa caagctgaac gccgtcgcct
     1441 cggtggcgaa cgtcgccgca tcgctgttcg gcggcatctt cggacgcgcc gcgcaatccg
     1501 cgagcgcgat ccagtcgacc gtcgccggcc cgcagcacga ctcggcgctc gacgccgcgg
     1561 tgcgcgagat cagcccgctg ttcaagcagt gcacgcgctg cggctcctgg gtctgcgagc
     1621 ccgtgtgctg gaacaagaag gcgggcttgt gcgagggttg tgcaccggat ctcgatgaag
     1681 agatcgccgc cgcacaggcc caggccgcgc gacagcaggc gaccgacaag gcgcgcgatg
     1741 ttgattacct cgggcaacgc aacctggcgc aggtcgtcgc acccgcgtgt ccgagctgcg
     1801 gcgcgaagac gcagggtggc cggttctgtc ccgagtgcgg gacgacgctc agcgcgaaac
     1861 ggaaatgcgc cgactgcggc gccgaggccg acggcaaccc gaagttctgt ccggagtgcg
     1921 gcaagccata cggtcgttag ggtgatcgcc gaggcgcgtc gagcgaacgc cgcgttcgcg
     1981 ctgttcgacg cgagcggcgc agtcgcgcga tcgggcgaag cgatcgcggt cgtgggcgac
     2041 gacgcgctga ccgtcggtcc tgtgacggtg tcgttcctcg atgccgactc tcttcgcgct
     2101 gcggactatc ggatcgagct cggtctatgg ccgagtggcc ggctcgagct ctcgcagctc
     2161 ggccgtcgct tcgagacgtt cgccgccgaa ctgcgccgca ttcgcaatca ggctcgcgtc
     2221 gccggcgtgc tcgcgcacgg cgtggcgatg ccggaaacct tttcgggcgc gttgctcgct
     2281 gactcgcggc gctgcgccgc ggacttcctc gtgttcgaca cccacgtcac ggtcgtgccc
     2341 gaggacgacg atccgtggca ggtgccgcta ggcgccgtga cggcagtgcg gtttcagccc
     2401 gacccacccg cggtgctgct cgagacgggc gccggcctaa cgacgctcgg ccagctcgcg
     2461 cgcaggcgcg aggaatgcga agccgcgatc gtggagcgtc gcgaggcgca gcgtggactg
     2521 ctcgcggagc tgacgggcca atcggggttc tcggacggct ggggcgtggc gcgcggcgag
     2581 gtccgcgact tcgatgcgct tctcgagcgc ttcacgtcgg cggatcgaac atcgtgcgtc
     2641 catgttctcg tggcggcagc cacggccgac ccacgactcg ggttcgtgca gctgctcgac
     2701 cccgagcccg acgtgatgcc gagcccggcg cgtctgcccg agcattgggc ggccttcctg
     2761 ctcgtgccgg tcggcacgct gacggtgctc gagatcctcg ccggcccagc cgcagcgacg
     2821 tacgtgtttc gcggagcgat cgacgcggtg aatcgcgacc tccaggcgct gcatttccgc
     2881 cgagcgcccc tcgcgctcac cgccgagcag gcacagctga cgcccgacaa ttcgtaccgt
     2941 ctcgcgctgc gccggctgca gccactgcag cggcttcgcg cca
//
LOCUS       DASSYW010000692         2139 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1503589, whole genome shotgun sequence.
ACCESSION   DASSYW010000692 DASSYW010000000
VERSION     DASSYW010000692.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2139)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2139)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2139
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1503589"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            64..513
                     /locus_tag="VFN38_11030"
     CDS             64..513
                     /locus_tag="VFN38_11030"
                     /inference="COORDINATES: protein motif:HMM:NF016060.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GtrA family protein"
                     /protein_id="HET9012339.1"
                     /translation="MATREEPQQHHRFHLRVRHGMRKPHNWVQLGKFLLVGLSGYVVN
                     LVVFTFSLEVLDVHHIAAATVAFAVAVTNNFWWNRHWTFAARGGHAGFQAARFFAVSV
                     TAFLIQVAFLELLITQADMRKVLAQAISLALATPVNFVGNKLWSFRL"
     gene            495..>2139
                     /locus_tag="VFN38_11035"
     CDS             495..>2139
                     /locus_tag="VFN38_11035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012340.1"
                     /translation="MVLPLVVLALLLAFPAGAQAGNETWTTPPLNERPAGKQLTLKQV
                     LAKGDATRTVKEYRRKYPTLRSLGYLDTATGNWLIRYVIPGKELIEVDVNDSTGLVTD
                     VWTGPQVLWGMARGAPGAFGRKLNAPYLWLPLCLLFILPFLDPKRPFRLLHLDLLVLL
                     GFGVSHYYFNHANISASTPLAYPVMGYLLLRALMIGFRPRKRSGPLVPVVPIQWLAYG
                     VIFLLGFRIGLNIFDSNVIDVGFAGVLGANRVAHGLSLYDWNLQWHPNTYGPVNYLAY
                     IPFEWIWPNHGKWDDLPAAHAAAIAFDALTTWGLYVLGTRLREGVAGKHLGNVLAYAW
                     VAFPYSAFVLESNSNDSLVALLVVWTLVFMRSAALSGMLVALGGAAKFAPWALAPLLA
                     TGRGEQRGARWLVFGVAFVTAFALVVLPFTADVGLMKFWDATAGYQADRPSPFSIWGL
                     YDGITPIRRVVEVAVLGFAVLLAIIPRRRSELQICALAAAVLVGVELCTSHWFYLYIV
                     WFTPPLFAALFGEYGTSSWRMPVARPESSASISTALSQGS"
BASE COUNT          290 a          755 c          693 g          401 t
ORIGIN      
        1 gcagtggacg atcgccgacg caaccccagc gatcgctcag cacttcgcgt taccgtgacc
       61 cccttggcca cgcgcgagga accgcagcag caccaccgct tccacctgcg tgtgcgccat
      121 gggatgcgca agccgcacaa ctgggtgcag ctcggcaagt tcctgctcgt gggcctgtcg
      181 ggatatgtgg tgaacctcgt tgtgttcacc ttctcgctgg aggtgctcga cgttcaccac
      241 atcgcggcag cgacggtcgc cttcgccgtc gccgtgacga acaacttctg gtggaaccgt
      301 cactggacgt tcgccgcccg cgggggccac gccggcttcc aggccgcccg cttcttcgcg
      361 gtcagcgtga cggcgttcct catccaggtc gccttcctgg agctcttgat cacgcaggcg
      421 gacatgcgca aggtcctggc gcaggcgatc tcgctggcgc ttgcgactcc cgtcaacttc
      481 gtcgggaaca agctgtggtc cttccgcttg tagttctcgc cctgctgctc gccttcccgg
      541 ccggggccca ggccggcaac gagacctgga ccacgccgcc gctcaacgag cgcccggcgg
      601 gcaagcagct cacgctcaag caggtcctcg ccaagggtga cgcgacccgg accgtcaagg
      661 agtaccggcg caagtacccg acgctgagat cgctcggcta cctggacacc gcgaccggca
      721 actggttgat ccgctacgtg atccccggca aggagctgat cgaggtcgac gtgaacgact
      781 cgaccggcct ggtcaccgac gtgtggacgg gaccgcaggt gctgtggggg atggcgcgcg
      841 gcgcccccgg cgcgttcggc cgcaagctca acgcgcccta cctgtggctg ccgctctgcc
      901 tgctgttcat ccttccgttc ctcgacccga aacgcccgtt ccgattgctc cacctggacc
      961 tgctggtgct actcggcttc ggcgtctcgc actactactt caaccacgcg aacatctcgg
     1021 cgtccacgcc gctcgcctat ccggtgatgg ggtacctgct gctgcgcgcg ctgatgatcg
     1081 gcttccggcc gcgcaagcgc tcggggccgc tcgtgcctgt cgtcccgatc cagtggctcg
     1141 cctacggcgt gatcttcctg ctgggcttcc ggatcgggct gaacatcttc gactcgaacg
     1201 tgatcgacgt cggctttgcc ggcgtgctcg gagcaaaccg cgtcgcgcac ggcctgtcgc
     1261 tctacgactg gaacctccag tggcacccga acacgtacgg acctgtcaac taccttgcct
     1321 acatcccgtt tgaatggatc tggccgaacc atggcaagtg ggacgacctg ccggccgcgc
     1381 acgcggccgc gatcgcgttc gacgctctga cgacgtgggg gctctatgtg ctcggcacgc
     1441 gcctgcgcga gggcgtcgcc ggcaagcacc tggggaacgt gctcgcgtac gcgtgggtcg
     1501 cgttcccgta cagcgcgttc gtgctggagt cgaactcgaa cgactcgctg gtggcgctgc
     1561 tcgtggtgtg gacgctggtg ttcatgcgct cggctgcgct cagcgggatg ctcgtcgcgc
     1621 tcggcggcgc ggcgaagttc gcgccgtggg cgctcgcgcc gctcctggcg accgggcgcg
     1681 gcgagcagcg cggcgctcgc tggctcgtgt tcggagtcgc attcgtcacc gcgttcgcgc
     1741 tcgtggttct gccgttcacc gcagacgtcg ggctcatgaa gttctgggac gcgaccgccg
     1801 gctaccaggc cgatcgcccg tcaccgttct cgatctgggg cctgtacgac ggcatcacgc
     1861 cgatcaggcg cgtggtcgag gtggccgtgc tcggattcgc ggtcctgctc gccatcatcc
     1921 cgcgccggcg cagcgagctg cagatctgcg cgctcgccgc cgccgtgctc gtgggcgtcg
     1981 agctctgcac ctcgcactgg ttctacctct acatcgtctg gttcacgccg ccgctgttcg
     2041 ccgcgttgtt cggcgagtac ggcacgagca gctggcggat gccggtcgcg cgacccgagt
     2101 cgtccgcctc gatcagcact gcgttgagcc aagggtcct
//
LOCUS       DASSYW010000693         3457 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_426045, whole genome shotgun sequence.
ACCESSION   DASSYW010000693 DASSYW010000000
VERSION     DASSYW010000693.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3457)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3457)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3457
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_426045"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1163
                     /locus_tag="VFN38_11040"
     CDS             <1..1163
                     /locus_tag="VFN38_11040"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013718.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="vanadium-dependent haloperoxidase"
                     /protein_id="HET9012341.1"
                     /translation="YRSLAGQLHGLSPVPAPEPNAEYSMPLAGVHAFMTVGRALTFSR
                     PRMDSLRSAMDERIRASGVSGPVFERSIAYGDTVAKHILAWAAKDKFVQTRGYPKYTV
                     TSAPGRWVPTPPAYMDAVEANWAVLRPFVLDSASQFKPPPPPAFDMAAGTPFRAMVQE
                     VVDTTAHLTEEQRAIAAFWDCNPYVMHVQGHAMFATKKITPGGHWMGITAIASRQANA
                     DLMRSAEAYALTSLALADAFIGTWDEKFRSNLVRPETVINAYVDEKWEPVLQTPPFPE
                     YPSGHSVVSTAAATVLARLYGTPFAFVDSAEVEYGLPARSFPSFEAAAAEAAISRLYA
                     GIHFRPAIEKGAVLGRSVGTLVNERVRTRGDVALAKQAVASSAPSSAGARRP"
     gene            complement(1140..1607)
                     /locus_tag="VFN38_11045"
     CDS             complement(1140..1607)
                     /locus_tag="VFN38_11045"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HET9012342.1"
                     /translation="MTPSVLRDRLPRIFAVVLLAACAPTRDPETGATPAPPASSGTIT
                     AEQIQQSPGGDPIEKLLMSRSPGVWVGRAADGSLAVRIRGRATGFEPLYVLDGVPFQP
                     GPGGALSGVNPYDIESIKVLKDAVDITMYGSRGANGVILIKTKRAGSRTPGAG"
     gene            1722..>3457
                     /locus_tag="VFN38_11050"
     CDS             1722..>3457
                     /locus_tag="VFN38_11050"
                     /inference="COORDINATES: protein motif:HMM:NF022039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 97 catalytic
                     domain-containing protein"
                     /protein_id="HET9012343.1"
                     /translation="MLMRHWGRALARSATCAAFLAASATAQSPLRVASPDGRNAVSVQ
                     VRDGGLWYAVQRHGGAVLTPSRLGFAFRGAPALRDSLRITGSITGTHDERWTQPWGEV
                     ASVRDHHNELRVEVAEASSAGRRFAVVFRVFDDGVGFRYEIPDQPGLRDYEISDELTE
                     FALADNGRAWWIASDRPRLDRSEQLYSAGPVSTLDSVQTPLTMEMSNGLVVVIHEANL
                     VDYPRMFLAGPRMESRTLRAALAPWADGVKVRGRTPLITPWRSIQLADRVEDLQPQLL
                     TLNLNPPSRIADPRWIVPQKYVGIWWGMHINTMTWSSGPKHGATTANTRQYIDFAAAN
                     GFGSVLVEGWNTGWDGDWIANRNAFSFTQPYPDYDLRGLAAYAKSKGVGLIAHNETSG
                     GIENYERQLEDAFSLYRSLGITAIKTGYVADTVGGGQSHYGQFAVRHHRRVIETAARY
                     GIMVDAHEPIHDTGERRTWPNMMTREGARGQEYNAWGGEGGNPPEHETILFFTRMLAG
                     PMDFTPGIFDLLMRRPTGTPRTLEEPRVRTTLAKQLALYVVLYSPLQMAADLPENYAN
                     QPAFQFIRDVPT"
BASE COUNT          530 a         1214 c         1230 g          483 t
ORIGIN      
        1 agtaccgctc gctcgccggc cagctgcacg ggctgtcgcc cgttccggcg ccggagccga
       61 acgcggagta ctccatgccg ctcgcgggcg tccacgcctt catgacggtg ggccgcgcgc
      121 tcaccttctc acgtccgcgg atggattcgc tgcgcagcgc gatggacgag cgcatccggg
      181 cgagcggggt gtccggaccc gtgttcgagc gctccatcgc ctacggcgac accgtggcga
      241 agcacattct cgcctgggcg gcgaaggaca agttcgtcca gacgcgcggc tacccgaagt
      301 acaccgtgac ctcggccccg ggccggtggg tgccgacgcc ccccgcctac atggacgccg
      361 tggaggccaa ctgggcggtg ctgcgcccct tcgtgctcga ttcggccagc cagttcaagc
      421 cgccgccgcc accggcgttc gacatggcgg ccggcactcc cttccgcgcg atggtgcagg
      481 aggtggtgga cacgaccgcg cacctcacgg aggaacagcg ggcgatcgcc gcgttctggg
      541 actgcaaccc gtacgtgatg cacgtgcagg gtcacgcgat gttcgccacg aagaagatca
      601 ctcccggcgg ccactggatg gggatcacgg cgatcgcgtc gcggcaggcg aacgcggatc
      661 tcatgcggtc ggccgaggcg tacgccctca cctcgctcgc actggccgac gccttcatcg
      721 gcacgtggga cgagaagttc cgcagcaacc tcgtgcgccc cgagacggtg atcaacgcct
      781 acgtggacga gaagtgggag ccggtgctcc agacgccccc cttcccggag tatccgagcg
      841 gtcacagcgt ggtgtccacc gcggcggcga cggtgctggc gcggttgtac ggcaccccgt
      901 tcgcgttcgt ggactcggcg gaggtggaat acgggctgcc tgcgcgctcc ttcccctcgt
      961 tcgaggcggc ggcggccgag gcggcgatca gccgcctgta cgccggcatc cacttccggc
     1021 cggcgatcga gaagggcgcg gtgctgggcc gcagcgtggg caccctcgtg aacgagcggg
     1081 tcaggacgcg cggtgacgtc gcgctggcga agcaggccgt cgcgagctcc gccccgtcgt
     1141 cagccggcgc ccggcgtccg tgaccccgcc cgcttggtct tgatgaggat cacgccgttg
     1201 gcgccacggg agccgtacat cgtgatgtcc acggcgtcct tgagcacctt gatgctttcg
     1261 atgtcgtagg gattgacccc ggacagggcg ccgccgggcc cgggctggaa gggaacgcca
     1321 tccaggacgt agaggggctc gaaccccgtg gcgcgcccgc ggatgcgcac cgcgaggctg
     1381 ccgtcggccg cgcggcccac ccacacgccg ggcgaccggc tcatgagcag cttctcgatc
     1441 ggatcgccgc ccggactctg ctggatctgc tccgccgtga tggtgccgga gctggccggc
     1501 ggggcggggg tggcgccggt ctccggatcg cgggtgggcg cgcaggcggc gagcagcacg
     1561 acggcgaaga tgcggggcag ccgatcgcga aggacggagg gcgtcatgtg gacccgtggc
     1621 aggagtcggt accgaatgta cgaagcagca ttccccatgc ccagtcaagc cgggctcgcc
     1681 acgggtgcga tccgaaggtt caacatccac cggagctccg catgctgatg cgccactggg
     1741 gccgcgcgct cgcgcgctcg gccacctgcg cggccttcct cgccgcctcc gcgacggcgc
     1801 agtcgccact gcgcgtggcc tcgcccgacg ggcgcaacgc cgtgtcggtg caggtccgag
     1861 acggcgggct gtggtacgcc gtgcagcgcc acggcggagc cgtgctcacc ccctcgcggc
     1921 tcggcttcgc cttccgcggc gcgccggcgc tgcgcgacag cctgcgcatc acggggagca
     1981 tcaccggcac gcacgacgag cggtggaccc agccgtgggg ggaggtggcg agcgtgcgcg
     2041 accaccacaa cgagctgcgc gtggaggtag cggaggcatc gtcggccggc cggcgcttcg
     2101 ccgtggtgtt ccgcgtgttc gacgacggcg tcggcttccg ctacgagatc cccgatcaac
     2161 ccggccttcg cgactacgag atttccgacg agctcaccga gttcgcgctg gccgacaacg
     2221 ggcgggcgtg gtggatcgcc tcggaccgtc cgcggctcga ccggtcggag cagctgtatt
     2281 cggcggggcc cgtgagcacc ctggacagcg tgcagacccc gctcacgatg gagatgtcga
     2341 acgggctcgt ggtcgtgatc cacgaagcca accttgtgga ctacccgcgg atgttcctgg
     2401 ccggcccgcg gatggagagc cggacgttgc gcgccgcgct ggcgccgtgg gccgacgggg
     2461 tgaaggtgcg cggccgcacg cccctgatca ccccctggcg cagcatccag ctcgccgacc
     2521 gcgtggagga cctccaaccg cagctgctca cgctcaacct caatcccccc agccgcatcg
     2581 ccgacccgcg ctggatcgtg ccgcagaagt acgtcggcat ctggtggggg atgcacatca
     2641 acacgatgac gtggagctcg ggaccgaagc acggggcgac gacggccaac accaggcagt
     2701 acatcgactt cgccgcggcc aacggcttcg gcagcgtgct cgtggagggg tggaacaccg
     2761 ggtgggacgg cgactggatc gccaaccgca acgccttctc gttcacgcag ccgtaccccg
     2821 actacgacct gcgcgggctc gccgcgtacg cgaagtcgaa gggggtgggg ctcatcgccc
     2881 acaacgagac gtcgggcggc atcgagaact acgagcggca gctcgaggac gcgttcagcc
     2941 tctaccggtc gctcggcatc accgcgatca agaccggcta cgtggccgac acggtgggcg
     3001 gaggccagtc gcactacggg cagttcgccg tgcggcacca ccgcagggtg atcgagaccg
     3061 cggcgcgcta cgggatcatg gtggacgccc acgagccgat ccacgacacg ggggagcgcc
     3121 gcacctggcc gaacatgatg acgcgcgagg gcgcgcgagg gcaggagtac aacgcgtggg
     3181 ggggagaagg gggcaatcct ccggagcacg agacgatcct gttcttcaca cgcatgctcg
     3241 ccgggccgat ggatttcacc cccggcatct tcgatctcct gatgcggcgg cccaccggca
     3301 cgccgcgcac gctggaggag ccgcgcgtgc gcaccacgct cgccaagcag ctcgcgctgt
     3361 acgtggtgct ctactcgccg ctgcagatgg ccgccgacct gcccgagaac tacgccaacc
     3421 agccggcctt ccagttcatc cgcgacgtgc ccacgga
//
LOCUS       DASSYW010000694         2503 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1494683, whole genome shotgun sequence.
ACCESSION   DASSYW010000694 DASSYW010000000
VERSION     DASSYW010000694.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2503)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2503)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2503
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1494683"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            245..733
                     /locus_tag="VFN38_11055"
     CDS             245..733
                     /locus_tag="VFN38_11055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012344.1"
                     /translation="MNVYLRDKLLQKLDSLSDARGYQVLDYVDFLESKYAERASAAAA
                     GNPLTRFADAVEERLRAGKVSATAVAETMGLMNRAMGVLSGAAAAGKSVANDLMSATS
                     RVMDAATTAATAPAGPPAPRADGQAAPSGTTGATGAAGTGASGSGGSGTTPGGTPPAA
                     GN"
     gene            773..1264
                     /locus_tag="VFN38_11060"
     CDS             773..1264
                     /locus_tag="VFN38_11060"
                     /inference="COORDINATES: protein motif:HMM:NF018508.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YkvA family protein"
                     /protein_id="HET9012345.1"
                     /translation="MASTTGSRARGKSAGASGASAGMGGAGARARASTDSPRTGAKRT
                     VVYYMKQLPAYLRLLGGLITDRRVSAVDKLLVAGAMAYIAMPVDLIPDFIPFLGEVDD
                     VFILVMALQRLVANAGRNVLLAHWTGALEDLADLNLKEALAAAAFFLPRGIRRRLKVI
                     GRG"
     gene            1383..>2503
                     /locus_tag="VFN38_11065"
     CDS             1383..>2503
                     /locus_tag="VFN38_11065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HET9012346.1"
                     /translation="MPSASRPATQTQSESGPSRNGAARVRDDVALTFDDVLLTPRHSV
                     THPKDVSTRSFFSRKIELNVPLVSAAMDTVTEAEMAIAMARAGGIGVLHKNMSIDRQA
                     MQVDIVKRSESGMILNPYTLPESASLREAANLMSRFRVSGVPIVDGDGRLVGIITNRD
                     LQFERSLDRPVAEAMTKDRLVTAPVGTTLDEAERILAKHRVEKLPVVDADRRLKGLIT
                     VKDIHKRRQYPTANKDSHGRLRVASAIGAAGDFLTRAKALIDAGVDALIIDTAHGHAE
                     GVLDATQKVRDAFPDTQLIVGNVATREGARALVERGVDAVKVGVGPGSICTTRVVTGV
                     GVPQLTAVFDAVEGAGDVPVIADGGIKYSGDAVKALAAGA"
BASE COUNT          373 a          842 c          977 g          311 t
ORIGIN      
        1 ctgacggcat cgcgacgcgg acggcgacgc gcgggatgac gcggccggcc gtcgagtgaa
       61 gtgcgaggag ggcggagcca cgatcgcggc tccgcccttc gtcgcgaacg cacccgggtg
      121 cccgcgatcg cttgccccgc caccgccggc gacagagctt tccgctgcac ggcgcgcggc
      181 cctcggcgtg atcgcggtgg ccgcagcgcc ggcggctttc ggctccccat ctcatgagcg
      241 gcacatgaac gtctatctgc gcgacaagct cctccagaag ctcgactcgc tgtccgacgc
      301 gcgcggctac caggtgctgg actacgtgga cttcctggag tccaagtacg ccgagcgggc
      361 gtcggcggcg gcggccggga atccgttgac gcggttcgcc gatgccgtgg aggagcggct
      421 gcgggcgggg aaggtgagcg ccacggcggt ggcggagacg atggggctga tgaaccgggc
      481 gatgggggtc ctgagcggcg cggcggcggc cgggaagtcg gtggcgaacg acctgatgag
      541 cgcgacctcg cgggtgatgg acgccgcgac gacggcggcc accgcccccg cggggccgcc
      601 cgcgccccgg gccgatggac aggcggcccc gagcggcacg actggtgcga ctggagcggc
      661 tggaacgggg gcgagcgggt cgggcgggtc gggaacgacg cccggcggca ccccgccggc
      721 cgccggcaac tagccggggc cggaccaacc atcaggaaac gggagcaggc gagtggcatc
      781 gacgacggga agccgggcac gcggcaagag cgcgggtgcg agcggggcca gcgcgggaat
      841 gggcggggcc ggcgcgcgcg cgcgcgccag tactgattcg ccgcggacgg gcgccaagcg
      901 caccgtggtc tattacatga agcagctgcc ggcgtacctg cggctgctgg gtgggctcat
      961 caccgaccgg cgcgtcagcg cggtggacaa gctcctggtg gcgggggcga tggcctacat
     1021 cgcgatgccg gtggacctga tccccgactt catccccttc ctgggcgaag tggacgacgt
     1081 cttcatcctc gtgatggcgc tccagcggct ggtcgccaac gcgggacgca acgtgctgct
     1141 ggcgcactgg acgggggcgc tggaggatct cgccgatctg aacctgaagg aggcgctggc
     1201 ggcggcggcg ttcttcctgc cgcgcgggat ccggcgccgg ctgaaggtga tcgggcgagg
     1261 ctaacgctgc gcgggcgggc cggggcgcgc agcccgcggc cctcatgggg cgcttcggcc
     1321 cggctggcgc gtagcgccag cagcgtctac gtttcgccat ggcgacaaca atccgctcag
     1381 acatgcccag cgcctcccgg cccgcgactc agacccagtc tgagagcggg ccgtcgcgca
     1441 atggggccgc acgggtccgc gacgacgtcg cgctcacctt cgacgacgtc ctcctgacgc
     1501 cgcggcactc ggtgacgcat ccgaaggacg tctccacgcg ctccttcttc tcccgcaaga
     1561 tcgagctgaa cgtcccgctc gtgtcggcgg cgatggacac cgtcacggag gccgagatgg
     1621 ccatcgcgat ggcgcgggcg gggggcatcg gggtgctgca caagaacatg tccatcgacc
     1681 gccaggcgat gcaggtggac atcgtgaagc gcagcgagag cgggatgatc ctcaacccgt
     1741 acaccctccc cgagtcggcc tcgctgcgcg aggcggccaa cctgatgtcg cgcttccgcg
     1801 tgagcggcgt gccgatcgtg gacggggacg gccggctggt gggcatcatc accaaccgcg
     1861 acctccagtt cgagcgcagc ctcgaccgcc cggtggccga ggcgatgacg aaggaccgcc
     1921 tcgtgacggc gccggtgggg acgacgctcg acgaggcgga gcggatcctc gccaagcacc
     1981 gcgtggagaa gctccccgtg gtggacgccg accggcggct caaggggctg atcacggtga
     2041 aggacatcca caagcggcgg cagtacccca cggcgaacaa ggactcgcac ggccgcctcc
     2101 gcgtcgcgtc ggcgatcggg gcggcgggcg acttcctcac ccgggcgaag gcgctcatcg
     2161 acgccggggt ggacgcgctg atcatcgaca cggcgcacgg ccacgccgaa ggggtgctcg
     2221 acgcgacgca gaaggtgcgc gacgcgttcc ccgacacgca gctcatcgtc ggcaacgtgg
     2281 ccacgcgcga gggcgcgcgc gcgctcgtgg agcgcggggt ggacgcggtg aaggtggggg
     2341 tggggcccgg ctccatctgc acgacgcgcg tcgtcacggg cgtgggggtg ccgcagctca
     2401 ccgcggtgtt cgacgcggtg gagggcgcgg gggacgtgcc ggtgatcgcc gacggcggca
     2461 tcaagtattc cggcgacgcg gtgaaggcgc tcgccgccgg ggc
//
LOCUS       DASSYW010000695         2804 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_773583, whole genome shotgun sequence.
ACCESSION   DASSYW010000695 DASSYW010000000
VERSION     DASSYW010000695.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2804)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2804)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2804
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_773583"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..365)
                     /locus_tag="VFN38_11070"
     CDS             complement(<1..365)
                     /locus_tag="VFN38_11070"
                     /inference="COORDINATES: protein motif:HMM:NF022646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2891 family protein"
                     /protein_id="HET9012347.1"
                     /translation="MTAPAETRLTPELASRFARLALAHVTREYPNKLDHVLNDAGDLQ
                     SPRALHPVFFGSFDWHSCVHGYWLLARLRRAVSALPEQDAVRELFDMQLTDERVAGEV
                     AYLAQPLRATFERPYGWGWL"
     gene            complement(362..1315)
                     /locus_tag="VFN38_11075"
     CDS             complement(362..1315)
                     /locus_tag="VFN38_11075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF979 domain-containing protein"
                     /protein_id="HET9012348.1"
                     /translation="MIGLGFLYLLMGLLVGGAALVNLLTRDNPKRLRNALFWGLYAVS
                     FLAGSYLTDFANGLLVIAMVLVASFGGLGQGAGESASRTEREASARRWGNRLFIPALL
                     LPALTLLGTLTLKRVSIAGHPLVDPKQVTLVSLAFAILVALGVAMAMLRPPPLAPVRE
                     GRRLLDAVGWAAVLPQMLAALGALFALAGVGQVVAGIAGRWIPLDSPFAAVATYTLGM
                     ALFTMVMGNAFAAFPVMTAGIGLPLVVHRFGGDPAIMAAIGMLSGFCGTLMTPMAANY
                     NIVPAALLELPSEYAVIRVQLPTALLLLATNTLLMYTLVFR"
     gene            complement(1312..1986)
                     /locus_tag="VFN38_11080"
     CDS             complement(1312..1986)
                     /locus_tag="VFN38_11080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF969 domain-containing protein"
                     /protein_id="HET9012349.1"
                     /translation="MMTLIGVAIVVVGFVLRLNPLLVVTCAGIATGLAAGLDLTAVIA
                     ALGRSFTESRYVPIVWMVLPVIGLLERSGLKERARELIAGIRVATTGRVLIAYLAIRQ
                     LTAALGLTSLGGHAPMVRPLIAPMAEGAAEHRLGELSDATRWRIRAHAAAADNVGLFF
                     GEDIFIAIGSILLIKGFLEQNGIRIEPIHLAVWAIPTAIAAFLIHATRLVLLDRRLRA
                     GAEERA"
     gene            2251..>2804
                     /locus_tag="VFN38_11085"
     CDS             2251..>2804
                     /locus_tag="VFN38_11085"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HET9012350.1"
                     /translation="MGSDSSRLADDPQAPTATSPGAGIFGQALFAQSPLSTVVYDPAG
                     RITAANAAFERLFELRVADIQASYSILEDAQLAELGLAPSIRRAFEGEPVVLPPLRYD
                     ARRVAGAGSTTWTQGYFYPVRDAAGTVAAVVLVHVDLTERRRAEDAARLLAEAGAALA
                     GSLDQQVTLATVARLAVPAVGDFCA"
BASE COUNT          424 a          994 c         1037 g          349 t
ORIGIN      
        1 agccaccccc acccgtaggg gcgctcgaac gtcgcgcgca gcggctgggc gagataggcc
       61 acctcgccgg ccacccgctc gtcggtgagc tgcatgtcga acagctcgcg cacggcgtcc
      121 tgctcgggca gcgcggacac cgcgcgccgc agccgggcga gcagccagta gccgtggacg
      181 caggagtgcc agtcgaagct gccgaagaag accgggtgca gggcccgcgg cgactggaga
      241 tcgcccgcgt cgttgagcac gtgatcgagc ttgttgggat actcgcgcgt cacgtgcgcc
      301 agggcgagtc gcgcgaatcg cgacgccagc tccggcgtca gccgcgtctc cgccggcgcc
      361 gtcatcggaa gacgagagtg tacatgagca gggtgttggt ggcgaggagg aggagcgcgg
      421 tcgggagttg gacacggatc acggcgtact cgctcggcag ctcgagcagc gcggccggca
      481 cgatgttgta gttggccgcc atcggcgtca tcagcgtccc gcagaagccg gagagcatgc
      541 cgatcgccgc catgatcgcc gggtcgccgc cgaagcgatg cacgacgagc ggcagcccga
      601 tcccggcggt catcacgggg aaggcggcga aggcgttccc catgaccatc gtgaacagcg
      661 ccatccccag cgtgtacgtc gccaccgcgg cgaacgggct gtcgagcgga atccaccggc
      721 cggcgattcc ggccaccacc tgacccacgc cggcgagcgc gaacagcgcg ccgagcgcgg
      781 cgagcatctg cggcagcacc gccgcccagc ccaccgcgtc cagcaggcgg cgtccctcgc
      841 gcaccggcgc cagcggcggc ggacgcaaca tcgccatcgc cacgccgagc gcgacgagga
      901 tggcgaaggc gagcgagacg agcgtcacct gcttcggatc caccagcgga tgtccggcga
      961 tactcacgcg cttgagggtc agcgtcccga ggagcgtcag cgccgggagg agcagggcgg
     1021 ggatgaagag acggtttccc cagcggcggg cgctcgcctc gcgctccgtc cttgaggcgc
     1081 tctcccccgc gccctgtccg agcccgccga agctggcgac gagcaccatc gcgatgacga
     1141 gcaggccgtt ggcgaagtcg gtgaggtacg agccggcgag aaagctgacc gcgtagagcc
     1201 cccagaagag ggcgttgcga agtcgcttcg ggttgtcgcg ggtgagcagg ttgacgaggg
     1261 ctgctccgcc cacgaggagc cccatcagga gatacaggaa cccgagtccg atcacgcgcg
     1321 ctcctccgcg ccggcgcgga gccgccggtc gagcagcacg aggcgcgtcg cgtggatcag
     1381 gaacgcggcg atcgcggtcg ggatcgccca gaccgcgaga tggatcggct cgatgcggat
     1441 gccgttctgc tcgagaaagc ccttgatgag gaggatcgag ccgatggcga tgaagatgtc
     1501 ctcgccgaag aagagcccga cgttgtcggc cgccgccgcg tgggcgcgga tccgccaccg
     1561 cgtcgcgtcg gacagctcgc cgagccggtg ctcggccgcc ccctcggcca tcggcgcgat
     1621 cagcgggcgc accatcggcg cgtgcccgcc gagcgacgtc aggccgagcg ctgcggtgag
     1681 ctggcggatc gcgaggtagg cgatgaggac gcggcccgtg gtcgccacgc ggatgccggc
     1741 gatcagctcg cgcgcgcgct ccttgagccc actccgctcg aggagcccga tcaccggcag
     1801 caccatccag acgatgggca cgtagcggct ctcggtgaac gagcggccga gcgcggcgat
     1861 caccgccgtg aggtcgagac ccgcggccag cccggtcgcg atgccggcgc aggtgacgac
     1921 gagcagcggg ttgagacgga ggacgaagcc gacgacgacg atcgccacgc cgatcagcgt
     1981 catcatcgcg ccgctcgctc cggcgcggcc ggcgttcgcg ccgccgatcg gggggcgtgg
     2041 gcgagcgggt cgcgggaggg agacgtcggc ggcatggcgt cctcgggggc gtgggggcct
     2101 cgtgagccgg gggattgtag ccgcgcgacc gcgtgatgcg ccagccggcc ggtcggggcg
     2161 agggcggccc ctcgtcggcg tcccgctggc ggcgcatcct gtctattatt accctcccgc
     2221 gcgcgaccgt agccactcga gcagcaccgc atgggctccg actcctcccg actggccgac
     2281 gacccgcagg ccccgacggc gacgtcgccg ggtgccggca tcttcggcca ggcgctgttc
     2341 gcgcaatcgc cgctcagcac cgtcgtctac gatcccgcgg ggcgcatcac ggcggccaac
     2401 gccgccttcg agcggctctt cgagctgcgc gtcgccgaca tccaggccag ctactcgatc
     2461 ctcgaggacg cgcagctcgc cgagctggga ctcgcgccgt ccattcgccg cgccttcgag
     2521 ggagagcctg tcgtgctgcc tcccctgcgc tacgacgcac ggcgcgtcgc cggcgccgga
     2581 agcacgacct ggacgcaggg ctacttctat ccggtgcgcg acgccgcggg gacggtggcg
     2641 gcggtcgtcc tcgtgcacgt ggacctcacg gagcgccgcc gcgccgagga cgccgcgcgc
     2701 ctgctcgccg aggcgggcgc tgcgctcgcc ggctcgctcg atcagcaggt gacgctcgcc
     2761 accgtggcgc gcctcgccgt gcccgcggtg ggagacttct gcgc
//
LOCUS       DASSYW010000696         5326 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1750062, whole genome shotgun sequence.
ACCESSION   DASSYW010000696 DASSYW010000000
VERSION     DASSYW010000696.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 5326)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5326)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5326
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1750062"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..572
                     /locus_tag="VFN38_11090"
     CDS             <1..572
                     /locus_tag="VFN38_11090"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HET9012351.1"
                     /translation="YVVVLEAGQNEARGLAVLNETRRLFPQKKVKYVVNTHAHFDHAG
                     GLPPFVAEGITIITDDNNKYFLLPALGSPRTLVGDALAKSKKKPAIDGVEKKLVLRDA
                     MRTLELHHVERLEHSDGMLIAYLPKERILFTADFPLPVAGQPMNPSAATLVENLNRLG
                     LDFDRYVTVHAPAPDRPLTRADVMAPASR"
     gene            763..1104
                     /locus_tag="VFN38_11095"
     CDS             763..1104
                     /locus_tag="VFN38_11095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012352.1"
                     /translation="MKRISAALAVAALIGFAGERAAAQSRGLGALAGSVSEEGGGGLG
                     GVLVKLPLPDGSAIEAKSDDSGKWNVNGIGKGEFTMVIYKEGFATKTVKLIVEKETMR
                     PEPIKIVLKKS"
     gene            complement(1217..2314)
                     /locus_tag="VFN38_11100"
     CDS             complement(1217..2314)
                     /locus_tag="VFN38_11100"
                     /EC_number="3.1.1.61"
                     /inference="COORDINATES: protein motif:HMM:NF001965.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0008984 - protein-glutamate methylesterase
                     activity [Evidence IEA];
                     GO_function: GO:0050568 - protein-glutamine glutaminase
                     activity [Evidence IEA];
                     GO_process: GO:0006482 - protein demethylation [Evidence
                     IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0018277 - protein deamination [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis response regulator protein-glutamate
                     methylesterase"
                     /protein_id="HET9012353.1"
                     /translation="MAVSQARAAEPVSRPGGAVRVVVVDDSAIVRKLLVDGLKNEPGI
                     EVVGTAADPYQARDLIVRLEPDVITLDIEMPRMDGLSFLRKLMEHRPMPVIIISSLTQ
                     RGSATAIEALRAGAIDVIPKPGGPYSIGEITETLRGKILGIREWKAPRAVSVRDAVPA
                     AAVSFDHVRPGHGLIAIGASTGGPQAIEALLTRLPAACPPILIAQHMPEHFTRTYAER
                     LDKICPMRVVEASDRQVVEQGVAYVAPGNRHMLVERDGVRLVLRLSDAPTVHHQRPSV
                     DVLFHSVAKLRAVKIVALLLTGMGQDGADGLLDLRQHGAETIAEHEQSCVVFGMPREA
                     IARNAAGHVASLLRMPSLIVDCFAKMLAAKH"
     gene            complement(2318..2767)
                     /locus_tag="VFN38_11105"
     CDS             complement(2318..2767)
                     /locus_tag="VFN38_11105"
                     /inference="COORDINATES: protein motif:HMM:NF025070.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheX"
                     /protein_id="HET9012354.1"
                     /translation="MVEESSQLDEAVAYVAEEGFFASVEPIGQVEWEALCTDHDTWLE
                     SSVRFHGPLGGALRCRLPLALARELVSAFLGMETGELPPTDPLVQDLTGELANMVCGR
                     WLTRTQGQVFDLEHPVVESVADGQCSGWSRYAANGVPLAIELAVEAR"
     gene            complement(2760..3125)
                     /locus_tag="VFN38_11110"
     CDS             complement(2760..3125)
                     /locus_tag="VFN38_11110"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HET9012355.1"
                     /translation="MDDSSVMRRMVRRTMELSEVPLGAVLEAGNGREALDLLQTTAVD
                     VLFTDINMPVMNGAELLRALSKQPDVDVRARVVISTDGSEARKAEVVGLNVDWYLEKP
                     LRPEVMRDVLSKVAERIYG"
     gene            complement(3151..3672)
                     /locus_tag="VFN38_11115"
     CDS             complement(3151..3672)
                     /locus_tag="VFN38_11115"
                     /inference="COORDINATES: protein motif:HMM:NF015908.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheD"
                     /protein_id="HET9012356.1"
                     /translation="MSTGAMMMGTPAGQSQRRLVIGIGEHAIAGPDSLIVTHALGSCV
                     AVCLWDPEVRVGAMLHFLLPESRVNPDRAKKQPGTFADTGIPLLIQEAIQRGLHKKRC
                     RAHLFGGAAVGAQGGLDVGKRNALAARRLLWQHGIFIHAEALGGTDPRTVNFSVADGT
                     YQVSCGRELVQEL"
     gene            complement(3669..4514)
                     /locus_tag="VFN38_11120"
     CDS             complement(3669..4514)
                     /locus_tag="VFN38_11120"
                     /inference="COORDINATES: protein motif:HMM:NF013867.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CheR family methyltransferase"
                     /protein_id="HET9012357.1"
                     /translation="MDAVLQRDADIALSDREMDRIVRLVYERSGITLHQGKRALIVAR
                     LHRLLKAGGFTSFSQYVRHVETDLSGHQLSVLLDAITTNHTSFFREDEHFRFLADRVV
                     PPLVAEGRPVRLWCAACSTGQEPVSIAMTLMQALPESHHGRVRLLASDISTRALKTAG
                     AGVYPMKVAAGVPPSLLKTYFERGLGADEGKVRVRAQLRRAIEYRRVNLIEIENLNET
                     FDVVFCRNVMIYFDKAVQQRVVSMIERHLAPGGYLFIAHSESLNGLSHELKWMAPAVY
                     QRRGA"
     gene            complement(4519..5025)
                     /locus_tag="VFN38_11125"
     CDS             complement(4519..5025)
                     /locus_tag="VFN38_11125"
                     /inference="COORDINATES: protein motif:HMM:NF013731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HET9012358.1"
                     /translation="MSTGTTGRFQREELVGKYLTFALGNEEYSVPVLKVREIIKIMDI
                     TAVPQVPEYVKGVVNLRGKVIPVVDLRLKFGCPAADYTERTCIIVVEVALSTGARMMG
                     IIVDHVSEVLNVTAEEIEQTPQFGDEIQTDYMKGIAKVRGQVKILLDLDRVLGVDGTI
                     AMPQPSAA"
     gene            complement(5051..>5326)
                     /locus_tag="VFN38_11130"
     CDS             complement(5051..>5326)
                     /locus_tag="VFN38_11130"
                     /inference="COORDINATES: protein motif:HMM:NF013731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HET9012359.1"
                     /translation="VSLGSVLGMGATALDPTAATVVVVEEGGSRIGLVVEELLHKQEV
                     VVKSLGDSFASVRGVAGGAILGDGRIGLILDPHGIVTMVREGSRRAA"
BASE COUNT          881 a         1825 c         1777 g          843 t
ORIGIN      
        1 actacgtggt ggtgctcgaa gccggccaga acgaagcgcg cggcctggcc gtcctgaacg
       61 aaacgcggcg gttgttcccg cagaagaagg tcaagtacgt ggtgaacacg cacgcgcatt
      121 tcgaccacgc gggcggcctg ccgccgttcg tggccgaggg catcacgatc atcaccgacg
      181 acaacaacaa gtacttcctg ctgccggcgc tcggatctcc gcgaacgctc gtgggtgacg
      241 cgctggcgaa gtcgaagaag aagccggcca tcgacggtgt cgagaagaag ctggtgctgc
      301 gggacgccat gcgcacgctc gaactgcacc acgtcgagcg gctggagcac agcgacggca
      361 tgctcatcgc ctacctgccg aaagagcgga tcctgttcac cgccgacttt ccgctgccag
      421 tcgccggaca gccgatgaac ccgtcggcgg ccacgctggt ggagaacctg aatcgcctgg
      481 gtctcgactt cgatcgctac gtgacggtgc acgcgcctgc accggatcgg ccgctgacgc
      541 gtgccgacgt gatggcaccg gcgtccagat aaccggcaca ttccggccgg ccgccggccc
      601 aatccagccc cggggagcgc cggggctcgt ccgcacacga cgtgcacctg tgcgcgcccg
      661 cgcgcaggcc gctgagccgt attcaagaat ccacgagccc ggccgatttt ctacggcgag
      721 cacacccatc gagcgtgtgc cagaccttaa ggaggatcga ctatgaaacg tatcagcgcc
      781 gcattggccg tcgctgcact catcgggttt gcgggtgagc gcgctgcggc gcagtcgcgg
      841 gggctcggcg cgcttgccgg gtcggtgagc gaagaaggcg gcggcggtct cggcggcgtg
      901 ctcgtgaagc tgccgcttcc ggacggcagc gccatcgagg ccaagagcga cgactcgggc
      961 aagtggaacg tgaacggcat cggcaagggc gagttcacca tggtgatcta caaggaaggg
     1021 ttcgccacca agacggtgaa gctgatcgtc gagaaagaga cgatgcggcc ggagccgatc
     1081 aagatcgtcc tgaagaagtc gtagccgcca caccgaactt ttcgcggggc ccgtgccgag
     1141 gcatgtggcc ccgcgacgtt tgtacggcgg gctcagggct caggccggct taagccttaa
     1201 gactcaagac ctaagcctag tgtttcgccg caagcatctt ggcgaagcaa tccacgatga
     1261 ggctgggcat gcgcagcagg ctcgcgacgt ggccagcggc attgcgggcg atcgcctcgc
     1321 gcggcatgcc gaacaccacg cacgactgct cgtgctcggc aatcgtctcg gcgccgtgct
     1381 gccgcaggtc cagcaggccg tcggcgccgt cctgccccat gccggtgagg agcagcgcca
     1441 cgatcttcac ggcacgcagc ttggccaccg aatggaacag cacgtccacc gaggggcgct
     1501 ggtggtgtac cgtcggcgca tccgacaggc ggaggaccag gcgcacgccg tcgcgctcca
     1561 ccagcatgtg gcggttgccg ggcgccacgt aggccacgcc ctgctccacc acctgccggt
     1621 cgctcgcttc gaccacgcgc atcgggcaga tcttgtcgag ccgctcggcg taggtgcgcg
     1681 tgaagtgctc cggcatgtgc tgcgcgatga gaatcggcgg acacgcggcc ggcaggcgcg
     1741 tgagcagcgc ttcgatggcc tgggggccgc cggtggacgc gccgatggca atcaggccgt
     1801 gaccgggccg cacgtggtcg aacgacaccg ccgcggccgg caccgcgtcg cgcacgctca
     1861 ccgctcgcgg cgccttccac tcgcggatgc ccaggatctt gccgcgcagc gtctcggtga
     1921 tctcgccgat cgagtacggg ccgcccggct tcgggatgac gtcgatggcg ccggcgcgca
     1981 gcgcctcgat ggccgtggcg gacccgcgct gcgtgagcga gctgatgatg atgaccggca
     2041 tcggccggtg ctccatcaac ttgcgcagga agctcaggcc gtccatgcgc ggcatttcga
     2101 tgtcgagcgt gatgacgtcg ggctcgaggc gcacgatcag atcgcgggcc tgatagggat
     2161 cggcggcggt gccgaccacc tcgatgccgg gctcgttctt caagccgtcg acgagcagct
     2221 tgcgcacgat ggccgagtcg tcgaccacga cgacgcgcac agcgccgccg ggccggctga
     2281 cgggctcggc tgctcgcgcc tgggacaccg ccatggtcta tcgcgcctcg accgccagtt
     2341 cgatcgcgag cggcacgccg ttggcggcgt agcggctcca cccgctgcac tgtccgtcgg
     2401 cgaccgattc gaccacgggg tgctcgagat cgaacacctg gccctgcgtg cgcgtcagcc
     2461 agcggccgca caccatgttc gccagctcac cggtgaggtc ctgcaccagc ggatcggtgg
     2521 gcgggagctc gccggtctcc atgccgagga aggccgacac gagctcgcgc gcgagcgcca
     2581 gcggcaaccg gcagcgcagg gcgccgccga gcggaccgtg gaagcgcacc gacgactcga
     2641 gccacgtgtc gtggtcggta cagagggcct cccactcgac ctggccgatg ggctcgacgc
     2701 ttgcgaagaa cccttcctcg gccacgtacg ccacggcttc gtccagctgg ctggactctt
     2761 caaccataga tgcgttctgc gactttggac aggacatctc gcatgacctc cgggcgcaac
     2821 ggtttttcca ggtaccaatc cacattcagg ccgaccactt cggccttgcg ggcttccgag
     2881 ccgtcggtcg agatgacgac ccgggcgcga acgtcgacgt cgggctgctt cgagagcgcg
     2941 cgcagcagtt ccgcgccgtt catcaccggc atgttgatgt cggtgaacag cacgtccacg
     3001 gcggtggtct ggagcaggtc gagcgcctcg cggccgttgc cggcctcgag caccgccccg
     3061 agcggaacct cgctcagctc catcgttcgt cggaccatcc gccgcatgac ggacgagtcg
     3121 tccacgatca gacagttgag tggtttcatc tcacagctcc tgcacgagtt cccggccgca
     3181 actcacctga taggtgccgt ccgcgaccga gaaattgacc gtccgtggat ccgtgccgcc
     3241 cagcgcttcg gcatggatga aaattccgtg ctgccagagc agccggcgcg cggcgagcgc
     3301 gttgcgcttg ccgacgtcga gcccgccctg ggcgccgacc gcggcgccgc cgaacaggtg
     3361 tgcgcggcac cgtttcttgt gcaagccgcg ctgaatggct tcctggatga gcagcgggat
     3421 gccggtgtcg gcaaaggtcc ccggctgctt cttcgcgcga tccgggttga cccgcgactc
     3481 gggcaacagg aagtgcagca tcgcgccgac gcgcacctcc ggatcccaca ggcacacggc
     3541 cacgcagctg ccgagcgcgt gcgtgacgat cagcgagtcg ggacccgcaa tcgcgtgctc
     3601 gccgatgccg atgaccaggc ggcgctgcga ctggccggcc ggcgtcccca tcatcatcgc
     3661 gcccgtgctc acgcgcccct ccgttgatag acggccggcg ccatccactt gagttcgtgc
     3721 gacagcccgt tgaggctctc ggaatgcgcg atgaacagat atccgcctgg tgccagatgg
     3781 cgctcgatca tcgacacgac gcgctgctgg acggctttgt cgaagtagat catgacgttg
     3841 cggcagaaga cgacgtcgaa cgtttcgttg aggttctcga tctcgatgag attgacgcgg
     3901 cggtactcga tggcccggcg cagctgcgcg cgtacccgca ccttgccctc gtcggcgccg
     3961 aggccgcgct cgaagtaggt cttgagcagc gacggcggca cgccggccgc caccttcatc
     4021 gggtacacgc cggcgccggc ggtcttcagc gcgcgcgtcg agatgtcgga cgccagcagc
     4081 cgcacgcggc cgtggtgcga ctcgggcagc gcctgcatca gggtcatcgc gatcgacacc
     4141 ggctcctggc cggtcgagca cgcggcacac cagagacgca cgggccggcc ctccgccacg
     4201 agcggcggca cgacgcggtc ggcgaggaag cggaagtgct cgtcctcgcg gaagaagctg
     4261 gtgtgattgg tcgtgatggc gtcgagcagc accgacagct ggtgaccgct gagatcggtc
     4321 tcgacgtgcc ggacgtactg ggaaaacgac gtgaacccac ccgccttcag cagccggtgc
     4381 aggcgcgcca cgatgagcgc ccgcttgccc tggtgcagag taatcccgct gcgctcgtag
     4441 acgagacgga cgatgcggtc catctcacga tcgctcagcg cgatatccgc gtcccgctgg
     4501 aggacggcgt ccacgatatc aggcggcgct cggctgcggc atcgcgatgg tgccgtccac
     4561 gcccaggaca cgatcgaggt cgagcaggat cttcacctgc ccccgcacct tggcgatgcc
     4621 cttcatatag tcggtctgga tctcgtcgcc gaactgcggc gtctgctcga tctcctcggc
     4681 cgtgacgttc agcacctcgg agacgtgatc cacgatgatg cccatcatgc gcgcgccggt
     4741 ggacagcgcc acttcgacca cgatgatgca ggtgcgctcg gtgtagtccg ccgccggaca
     4801 cccgaacttc agccggaggt cgaccaccgg aatcaccttg ccgcgcaggt tcacgacgcc
     4861 cttcacgtac tcgggcacct gcgggacggc ggtgatgtcc atgatcttga tgatttcgcg
     4921 caccttcagg acgggcacgc tgtattcctc gttcccgagc gcgaacgtca ggtatttccc
     4981 gaccagctcc tcgcgctgaa agcgtcctgt ggttcccgtg ctcatctcgc gtcctccgtt
     5041 cgcggcgccg ttacgcggcg cgccgcgatc cttcacgcac catcgtcacg atgccgtgcg
     5101 ggtcgagaat caacccgatc cggccgtcgc cgaggatggc gcccccggcc actccgcgta
     5161 ccgacgcgaa cgagtcgccg agcgacttca cgacgacttc ctgtttgtgc agcagttcct
     5221 cgacgaccag gccgatgcgg ctgccgccct cttccacgac caccacggtg gcggccgtcg
     5281 ggtcgagggc cgtggcgccc atgccgagca ccgagccgag gctgac
//
LOCUS       DASSYW010000697         2583 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1782521, whole genome shotgun sequence.
ACCESSION   DASSYW010000697 DASSYW010000000
VERSION     DASSYW010000697.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2583)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2583)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2583
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1782521"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2193
                     /gene="hypF"
                     /locus_tag="VFN38_11135"
     CDS             <1..2193
                     /gene="hypF"
                     /locus_tag="VFN38_11135"
                     /EC_number="6.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003998 - acylphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyltransferase HypF"
                     /protein_id="HET9012360.1"
                     /translation="VHRGLAGWVRNVAGTVEIHVEGEDNDLDGFEIALRREAPPISRI
                     DTLFAEPADPLGVEEFRITESADADGNRPVPPDVAICAHCDAEMRDPAGRRYRHPFIT
                     CTDCGPRYTVIDQLPYDRERTSMAVFPMCDACRAEYEAPNDRRYHAETIACNACGPGI
                     WLERDDGSAIASGEHAIHSAVRLIATGLIAAIRGVGGFHLACDATDDSAVRRLRFRKH
                     RDAKPLAIMVATLADAEAIAHVSPAHEKLLLGPEHPIVLLPRRPDSTIAPAVAPGLDW
                     IGVMLPYAPLHRLLLESIDRPLVMTSGNLSDEPIAIENEEARTRLAGIADFFLLHDRE
                     ILSRVDDSVVRVVDGESVLLRRSRGYAPLPLRLPVASPEPLVAVGPHLKNTFTLVRGD
                     TAYVSPHIGDLECLESLAHFRATLARYRDLFRIDPTVAVRDLHPGYLSTRIAEELGLD
                     RVIAVQHHHAHVAAVMAEHAVTDRVVGVALDGTGYGDDGHVWGAEVLVADLLGYERKA
                     HLAYAPLPGGDAAAREPWRVAAGYASLDRDVAPAFALAFEGISDEQRGIVARQVERGL
                     NSPLASSMGRLFDAAAAVLGVRRGMSYEGQAAMELESLAGSVGACALTMPIEETAGML
                     AMNPLPLLATLGERRQRGVDVRTLAAMFHESVIDAIVRVALRVATAERLCTIALGGGS
                     FQNARLLSGVRRRLEEKGLRVLLPRSLGPNDGAISYGQAAVAAALLCE"
BASE COUNT          376 a          901 c          897 g          409 t
ORIGIN      
        1 gtgcatcgcg gactggccgg gtgggtgcgc aacgtggccg gcacggtcga gatccacgtg
       61 gaaggggagg acaacgacct cgatgggttc gagatcgccc tgcgccggga agcgccgccc
      121 atttcgcgca tcgacacgct cttcgcggaa cccgccgacc cgttaggcgt cgaggaattc
      181 cggatcaccg agagtgcgga tgcggacggc aaccgtccgg ttccgccgga cgtcgcgatc
      241 tgcgcgcact gcgacgccga gatgcgagat ccggcggggc ggcggtatcg gcatccgttc
      301 atcacctgca cggactgcgg cccgcgctac acggtgatcg atcagctgcc ctacgaccgg
      361 gagcggacgt cgatggcggt gtttccgatg tgcgacgcgt gccgggccga gtacgaggcg
      421 cctaacgacc gccggtacca cgcggagacg atcgcgtgca acgcgtgcgg ccccggtatc
      481 tggctcgagc gcgacgacgg cagtgcgatc gcgagcggcg agcatgccat tcacagcgcc
      541 gtgcgactga tcgccaccgg cctgatcgcg gcgatccgcg gcgtaggcgg ctttcacctg
      601 gcatgcgatg cgaccgacga ctccgccgtc cgccgattgc gcttccgcaa gcaccgcgat
      661 gcgaagccgc tcgcgatcat ggtcgccacg ctcgccgacg ccgaggcgat cgcgcacgtg
      721 tctcccgcac acgagaagct cctgctcggc cccgagcatc cgatcgtgct cctcccacgg
      781 cgccccgaca gcacgatcgc cccggcggta gcgccagggc tggactggat cggcgtgatg
      841 ctgccgtacg cgccattgca tcgcctgctg ctcgagtcca tcgatcgccc cctggtcatg
      901 acgagcggca acctgagcga cgagccgatc gccatcgaaa acgaggaggc gcgcacgcga
      961 ctggcgggga tcgccgactt cttcctgctg cacgaccggg agattctgtc gcgcgtcgat
     1021 gactcggtcg ttcgcgtcgt cgacggcgaa tccgttctgc ttcggcgctc gcgcgggtac
     1081 gccccattgc cgctccggct tccggtcgcg agtcctgagc cgctcgtagc cgtgggccca
     1141 catctcaaga acacgttcac gctcgtgcgc ggcgatacgg cgtacgtgag cccgcacatc
     1201 ggcgacctcg agtgcctcga gagtctcgcg cacttccgcg cgacgctcgc gcggtatcgc
     1261 gacctgtttc gcatcgaccc tacggtcgcg gtgcgcgatc tccaccccgg gtacctctcg
     1321 acccggattg ccgaggagct cggcctggat cgcgtgatcg cggtgcagca ccatcacgca
     1381 cacgtcgcgg cggtcatggc ggagcatgcg gtgacggacc gcgtagtcgg tgtcgcgctc
     1441 gatggcaccg ggtacggcga cgacggccac gtatggggcg ccgaggtgct cgtcgccgac
     1501 ttgttaggct acgagcggaa ggcgcacctc gcgtacgcgc cgctccccgg cggcgatgcg
     1561 gccgctcgcg agccgtggcg cgtggctgcc gggtacgcct cgctcgaccg ggatgtcgcg
     1621 ccggcattcg cgctcgcgtt cgaggggatc agcgacgagc agcgcggtat cgtcgcgcgg
     1681 caggtcgagc gcggtctcaa ctcgccgctc gcgtcgtcga tgggacggct gttcgatgcc
     1741 gcggccgctg tgctcggggt acgccggggg atgagctacg aggggcaggc ggcgatggag
     1801 ctcgagtcgc tcgcgggcag cgtcggcgct tgcgcgctca caatgccgat cgaggagacg
     1861 gccggcatgc tcgcgatgaa cccgcttcca ctgctcgcga cgctcggcga gcgacggcag
     1921 cgcggcgtcg acgtccggac gttggcggcg atgttccacg agtcggtgat cgacgcgatc
     1981 gtgcgggtgg ccctgcgcgt cgccacggcg gagcggctct gtacgatcgc gctcgggggt
     2041 ggctcgttcc agaatgcgcg gctgctctcg ggcgtccgcc gccgtctcga ggagaagggg
     2101 cttcgcgtcc tgctgccgcg gagcctcgga cccaacgacg gcgcgatcag ctacgggcag
     2161 gcagcggtcg cggcggcgct gctctgcgaa tagagggaac gtcagaggtc cctcgggctc
     2221 tgcatcgacg ctcgctcgcg ccagcatccg gctgctttcg cggcatcgtt ctaccccctt
     2281 ggccgctcgc gcgaccaaag cccggatgca aagcaggttc cagccgtttc caaactcgtt
     2341 ggggcgccga tcgtcgttcc ggccggctcc ggcgcgccaa aggtctgggt cgacgtgcca
     2401 gccgtagaaa ccgacccgcg aggcagcgcg taggccacat accgccaacg aaccccgagc
     2461 aatgaccctc tcgtcctttg taaagccggc ctggcgatcc ctccgccgca gccccgcctt
     2521 caccgtcacc gcctcggcga cgctgatcat cgggataggc gccgcggtgg cgatcttcgc
     2581 tct
//
LOCUS       DASSYW010000698         2224 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_249701, whole genome shotgun sequence.
ACCESSION   DASSYW010000698 DASSYW010000000
VERSION     DASSYW010000698.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2224)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2224)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2224
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_249701"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(124..>2224)
                     /locus_tag="VFN38_11140"
     CDS             complement(124..>2224)
                     /locus_tag="VFN38_11140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012361.1"
                     /translation="RLLFDGATVSDTLASVLKTEPPWHALRPDTPSSVRRLLRRCLQK
                     DRRRRLADAADARLEIDDAMSGAPEEGPVALAIPGRRASIVWASALVLTGLIGGALVA
                     WVARPAPVARETTRSLVSMAPTEQPGGVNPLEQRVGGRRPTRTSLSLSPDGKTLVFGA
                     IWGGVQQLYARPLNQLGATPIAGTSGAQNPFFSPDGQWVGFWAEGKLQKVPLAGGPAV
                     QLCDAAAIFGASWGSDDTIVFATARNGGLWRVSAAGGTPQAVTTPQQGEFSHRLPHVL
                     PGGRAVIFTILKGAQRWTDAQIVVRSLRTGEQSVHAEGGADGRYVPTGHLVYLRLGTL
                     MAAPFDLERLAVTGGATGLVDNVMQAANRNISDMENTLAGQFTFSDTGALVYVTGGAL
                     PGAERVLAWVDRKGHSQTLAAPPRSYSKPRLSADGRYISVSTQQDIRDVWRYDIARGA
                     LNPITVDGHSGYSLFAPDGKRVVFRSGAAGGEDNLYWKAADGSGEAERLTTSPRSQTP
                     ASWSPDGTTLAYVEEGPSSGFFQFDIWGLSTPDRKTRPIVQPPANEMSPEFSPDGHWL
                     AYVSNESGRNDVYVQPYPGPGERHLISNNGGEQPAWGADGRELFFVQADYVNRTRTLL
                     AVRISTAPEFQAGAPHTLFEHEDLAIAWGRSYDVSPDGQRFLLALTKERPGDRASTQM
                     IVVQNWFDELKRLVPVR"
BASE COUNT          375 a          762 c          727 g          360 t
ORIGIN      
        1 aagagtgcgc ggccggacgg aacagacact cgccagccac gcgtcgagtc gcgtccagcc
       61 cgctgttaca ctcgatacgc gggtgccacc ggttgagttg acgttcacca acctcgctaa
      121 aatctatcga accggtacca ggcgcttcag ctcatcaaac cagttctgca ccacgatcat
      181 ctgagtggac gcccgatcgc ctggtcgctc cttggtcagc gccagcaaga agcgctgtcc
      241 atccggcgac acgtcatagc ttcgtcccca cgcgatggcc agatcttcgt gttcgaacaa
      301 cgtgtgcggt gcccccgcct ggaattccgg ggccgtgctg atgcggacgg cgagcagcgt
      361 gcgcgttcgg ttgacgtaat cggcttgcac aaagaacagt tcgcgtccat cggcgcccca
      421 cgcgggctgc tcgccgccgt tgttggaaat caggtgtcgc tcgcccgggc ctggatacgg
      481 ctgcacgtag acgtcattgc ggccggactc gttcgagacg tacgcgagcc agtggccgtc
      541 cggcgagaac tctggagaca tctcattggc gggcggttgg acgatcggcc gagtcttccg
      601 atccggtgtc gacaggcccc agatatcgaa ctgaaagaac cccgaggacg gtccctcctc
      661 gacataggcg agcgtcgtcc cgtcgggcga ccaggaggcc ggtgtctggc tgcgcgggct
      721 ggtcgtcagg cgttcggcct ctccgcttcc gtcggcggcc ttccaataca ggttgtcttc
      781 acccccggcg gcgcccgagc ggaagacgac gcgcttcccg tccggcgcaa acaagctgta
      841 gccgctgtgc ccgtcaaccg tgatcggatt gagtgcgccg cgcgcaatgt cgtaccgcca
      901 gacgtcacgg atgtcttgtt gggtggagac cgagatgtag cgcccgtcgg ccgacaggcg
      961 gggcttcgaa tacgagcgcg gcggcgccgc cagcgtctgg ctgtgtcctt tccgatccac
     1021 ccacgcgagc acgcgttcag ccccaggcag cgcgccgcca gtcacataga cgagcgcacc
     1081 agtgtcggaa aaggtgaact gcccggcaag cgtgttttcc atgtcactga tattccgatt
     1141 cgccgcctgc atcacgttat cgaccagacc ggtcgcgccg ccggtcacgg ccaggcgctc
     1201 gaggtcaaag ggcgcggcca tcagcgtccc gagtcggagg taaacgaggt gaccggtcgg
     1261 cacatagcgc ccatcggcgc cgccttcggc gtggacggat tgctccccgg tcctcaagga
     1321 ccggaccacg atctgcgcgt cagtccaccg ctgcgcccct ttcaggatcg tgaagatgac
     1381 ggcccgtccc ccgggcagca cgtggggcaa ccggtgactg aactcgccct gctggggcgt
     1441 cgtgaccgcc tggggtgtac cgccagccgc cgacacgcgc cacaagccgc cgttccgggc
     1501 ggttgcgaag acgatggtgt cgtcgctgcc ccaactggcc ccgaagatcg ccgcggcgtc
     1561 gcagagctgg accgcagggc cgccggcgag agggaccttc tgaagcttgc cctctgccca
     1621 gaagccgacc cattgcccgt cgggcgagaa gaagggattc tgcgcgccgc tcgtgcccgc
     1681 aatgggtgtc gcaccgagtt ggttcagcgg gcgcgcgtac agctgttgaa cgccacccca
     1741 gatcgccccg aagaccagcg tcttcccgtc cggcgaaagc gacagcgagg ttcgtgtcgg
     1801 tcgccgccct cccacccgct gctccaaggg attcactcca cctggctgct cggtgggcgc
     1861 catgctcacg agcgagcggg tcgtctcccg agcgacgggc gcggggcgcg cgacccaggc
     1921 gacgagtgca cctccaatga gtccggtaag caccagggcg gaggcccaca cgatcgacgc
     1981 gcgcctgccc gggatcgcca gggcaacagg cccctcctcg ggcgcgccgc tcattgcgtc
     2041 gtctatttcc agccgtgcat cggcggcatc cgcgagccgg cgccgtcgat ccttttgcag
     2101 gcagcgccgc aagagacgac ggaccgatga aggggtgtcg gggcggagcg catgccacgg
     2161 cggctccgtc ttcaacaccg aggcgagcgt atccgagacg gtcgcgccat cgaacaggag
     2221 ccgg
//
LOCUS       DASSYW010000699         2301 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1040833, whole genome shotgun sequence.
ACCESSION   DASSYW010000699 DASSYW010000000
VERSION     DASSYW010000699.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2301)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2301)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2301
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1040833"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..636)
                     /locus_tag="VFN38_11145"
     CDS             complement(<1..636)
                     /locus_tag="VFN38_11145"
                     /inference="COORDINATES: protein motif:HMM:NF013662.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HET9012362.1"
                     /translation="MSAEPAPRLMAINIDEGEPGTFKDRYYLERDPHRFLEGALIAAW
                     AVGIEAIYIYLRDEYHGCRAILEQEIAALKANPPFELPGIQLRRGAGAYICGEESSMI
                     ESIEGKRGEPRLRPPYVAQVGLFGRPTLEHNMETLHWVREILEKGPAWFAGHGRHGRK
                     GLRSFSVSGRVREPGVKLAPAGVTLRELVDEYCGGMLPGHDLYGYLPGGASG"
     gene            complement(609..1358)
                     /locus_tag="VFN38_11150"
     CDS             complement(609..1358)
                     /locus_tag="VFN38_11150"
                     /inference="COORDINATES: protein motif:HMM:NF013426.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase subunit E"
                     /protein_id="HET9012363.1"
                     /translation="MTRASVVDTSRLGARRSARATPKGRSVDPAALDEVRALLGDAPR
                     RADLLIEFLHRIQDALGCLPAAHLVALAAELKLAAAEVYEVATFYHHFDVVKEGETAP
                     PALTVRVCDSIACDLAGSHHLLEKLPSLLGTDVRVLHAPCVGRCETAPVVVVGQNPIP
                     SATADQVVAEVKAGHVTHPASGPVTPGHIDYAAYRAFGGYALAAACRNGQKSRDDVIE
                     VMENSGLRGLGAPAFPPAASGSSCRPSPPRV"
     gene            complement(1375..>2301)
                     /locus_tag="VFN38_11155"
     CDS             complement(1375..>2301)
                     /locus_tag="VFN38_11155"
                     /inference="COORDINATES: protein motif:HMM:NF014073.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HET9012364.1"
                     /translation="LIAVIGLFGLGEILLTMEEGLAFKGVQGKINAAVVWQTWKKLPR
                     YWMTSLRGCLIGCWMGITPGGATPASFMSYGMARRMSKEREKFGHGHIEGVVAPETAA
                     HAAGTSALLPMLTLGIPGSPTAAVLLGGLLIWGLQPGPLLFVEKKEFVWGLIASMYLG
                     NIVGLLIVLTTVPWWAAILRIPFSIIAPVIVVICAVGAYTVHNNMFDVVMMVVFGVVG
                     YFFKKLRYPLAPLVLALVLGDMAETSFRQSMLLSGGGIGVFWSNALVGSIMTLALVLL
                     CWPLVSATIGAMRRRALAAEAASAGAAKASEP"
BASE COUNT          371 a          842 c          769 g          319 t
ORIGIN      
        1 gcccgacgcg ccgccaggca ggtagccgta caggtcgtgg cccggcagca tgccgccgca
       61 gtattcgtcg accagctccc gcagcgtgac gcctgccggc gccagcttga cacccggctc
      121 gcgcacgcgg ccgctgaccg agaatgagcg cagtcccttc cggccgtggc ggccatggcc
      181 cgcaaaccac gccggtcctt tctcgagaat ctcgcgcacc cagtgcagcg tctccatgtt
      241 gtgctcgagc gtcgggcgcc cgaacaggcc gacctgcgcg acgtagggcg gccgcaggcg
      301 cggctcgccg cgcttcccct cgatcgattc gatcatcgag gactcttcgc cgcagatgta
      361 ggcgccggcg ccgcgacgca gctgaatccc gggcagctcg aacggcgggt tggccttgag
      421 cgccgcgatc tcctgttcaa ggatcgcgcg gcagccgtgg tactcgtcgc gcaggtagat
      481 gtagatggcc tcgatgccga ccgcccacgc agcaatcaac gcgccttcga ggaagcggtg
      541 cggatcgcgt tccaggtagt agcgatcctt gaacgtgccc ggctcaccct cgtcgatgtt
      601 gatcgccatc agacgcgggg cgggctcggc cgacacgagc ttccacttgc ggccggcggg
      661 aaagccggcg ccccgaggcc gcgcagcccc gagttctcca tcacctcgat gacgtcgtcg
      721 cgcgacttct gcccgttgcg gcaggccgcc gccagggcgt agccgccgaa cgcacgatac
      781 gccgcgtagt cgatgtgacc gggcgtgacg ggacctgagg ccggatgcgt gacgtgcccg
      841 gccttcactt cggccacgac ctgatcggcc gtggcactcg gaatcgggtt ctggcccacc
      901 accaccaccg gcgccgtttc gcagcggccg acgcacggcg cgtgcagcac acgcacgtcg
      961 gtgccgagca gcgacggcag cttttcgagc aggtgatgcg aaccggccag gtcgcaggcg
     1021 atcgagtcgc acacgcggac cgtcagcgcg ggcggcgcgg tctcgccttc cttcaccacg
     1081 tcgaagtggt ggtagaacgt cgccacctcg tagacctcgg cggccgcgag cttgagctcc
     1141 gccgcgagcg cgaccaaatg cgccgccggc aggcagccca gagcatcctg gatccggtgc
     1201 aggaactcga tcagcaggtc ggcgcgacgg ggggcgtcgc cgagcagcgc ccgcacctcg
     1261 tcgagcgccg cgggatcgac ggaccgtccc ttgggcgtcg ctcgcgcgga ccgcctcgcg
     1321 ccgaggcgcg acgtgtcgac gaccgaggcg cgggtcatcg tgctccgccc gcgctcaggg
     1381 ctcgctcgcc ttcgcggcgc cggccgaggc cgcttccgcg gccagcgcgc ggcggcgcat
     1441 cgcgccgatc gtggcggaca cgagcggcca gcacagcagc accagcgcga gcgtcatgat
     1501 cgagccgacc agcgcgttcg accagaacac gccgatgcct ccgccggaca ggagcatcga
     1561 ctggcggaag ctcgtctcgg ccatgtcgcc cagcaccagc gcgagcacca gcggcgcgag
     1621 cgggtagcgc agcttcttga agaagtagcc gacgacgccg aacaccacca tcatcaccac
     1681 gtcgaacatg ttgttgtgga ccgtgtacgc gcccacggcg cagatcacga cgatcaccgg
     1741 cgcgatgatc gagaacggga tgcgcaggat cgccgcccac cacggcaccg tcgtcagcac
     1801 gatcaggagc cccacgatgt tgccgaggta catgctcgcg atcaggcccc agacgaattc
     1861 cttcttctcg acgaagagca gcgggcccgg ctgcagcccc cagatcagga ggccgccgag
     1921 cagcacggcg gcggtgggcg agcccgggat gccgagcgtc agcatcggaa gcagcgcgct
     1981 cgttccggcc gcgtgcgcgg cggtctccgg cgcgacgacg ccctcgatgt ggccgtggcc
     2041 gaacttctcg cgctccttcg acatccggcg cgccatcccg tagctcatga acgacgcggg
     2101 cgtcgcgcct cccggcgtga tccccatcca gcagccgatc aggcagccgc gcagcgacgt
     2161 catccagtag cggggcagct tcttccaggt ctgccagacg accgccgcgt tgatcttgcc
     2221 ctgcacgccc ttgaacgcga ggccctcctc catcgtgagg aggatctcgc cgagcccgaa
     2281 cagtccgatc accgcgatca g
//
LOCUS       DASSYW010000700         2344 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_150710, whole genome shotgun sequence.
ACCESSION   DASSYW010000700 DASSYW010000000
VERSION     DASSYW010000700.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2344)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2344)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2344
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_150710"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            82..>2344
                     /locus_tag="VFN38_11160"
     CDS             82..>2344
                     /locus_tag="VFN38_11160"
                     /inference="COORDINATES: protein motif:HMM:NF013974.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016903 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase family
                     protein"
                     /protein_id="HET9012365.1"
                     /translation="MDGSTAVVLMETAASEGAGAYPITPSTQMGEGWAAAVAEGKRNV
                     NGRKLLFFEPEGEHAAAAVTAGMSMTGLRATNFSSGQGVVYMHESLYPAVGKRLTYVL
                     NIAARAITKHALNVHAGHDDYHAVDDTGFFQLFAKDVQATADLNLIAHRIAELSLNPG
                     ILAQDGFLTSHAIEAMRLPERALVKEYLGDPADLIESPTPAQRMVFGAQRRRIPELFD
                     VDYPAMIGVVQNQDSYAQGVAAQRPFYFDHVADLADRAFAEYAALTGRHYARAAGYRL
                     EDAEWVIAGQGSVVSNAEAVVDHLRATRGLKVGVLDLTMFRPFPADLVTRLLAGKRGV
                     VVLERTDQPLAVDAPLLRELRAAMAQAVENGRARDEAEPGRKRRTRDAAPAALPYPKV
                     AAMAPSEVPDFFSGCFGLGSRDLQPGDIVAAVENMLPSGHRRRQFYLGIDFVRPATRL
                     PKLQIWQEELLESYPHLADLALPAAGALDLMPAGSVAVRIHSVGGWGAITMGKNLSMT
                     VFELFGMQVKANPKYGSEKKGQPTTFYATFAHEPIRLNSELKHVNVVLSPDPNVFRHS
                     NPLAGLAEGGVFVIQSDAEPQAFWSSLPASARHEIVDRKIRVFILDAFRIAASEASDV
                     ELRYRMQGAAFMGAFFAASPLLAQEELSEPALFEGIRSQMLKKFGGKGERVVEDNLRV
                     IRRGFDELRPVTVAAEPAQGADLAGTVPAMPAILDVDKAQPGLGNPGRFWEQVCVTCK
                     LGQDVLADPFAAIS"
BASE COUNT          353 a          806 c          856 g          329 t
ORIGIN      
        1 atcagattcg gcagcaaggc tgcacgcgcg gagctcacgc cggagtccgg cgcgccccgc
       61 tacccgggaa cgccggacgc catggacggc agcaccgccg tggtgctgat ggagacggcg
      121 gcgtccgagg gggcgggcgc gtatcccatc acgccgtcca cgcagatggg cgaagggtgg
      181 gccgccgcgg tggccgaggg aaagcgcaac gtcaatgggc gaaagctgct gttcttcgag
      241 cccgagggcg agcatgccgc cgcggccgtg acggcgggga tgagcatgac cggcctccgc
      301 gcgacgaact tctcgagtgg gcagggggtg gtgtacatgc acgagtcgct ctaccccgcg
      361 gtggggaagc ggctcaccta cgtgctcaac atcgccgcgc gcgccatcac gaagcacgcc
      421 ctgaacgtgc acgccggcca cgacgactac cacgccgtgg acgacaccgg gttcttccag
      481 ctgttcgcca aggacgtgca ggcgacggcc gacctgaacc tcatcgcgca ccgcatcgcg
      541 gagctgtcgc tcaacccggg gatcctcgcc caggacggct tcctcacgag ccacgccatc
      601 gaggcgatgc gcctccccga gcgcgcgctg gtgaaggaat acctcggcga cccggccgac
      661 ctgatcgagt cgccgacgcc ggcgcagcgg atggtgttcg gcgcgcagcg ccgccgcatc
      721 cccgagctgt tcgacgtcga ctacccggcg atgatcggcg tggtgcagaa ccaggacagc
      781 tacgcgcagg gcgtcgcggc gcagcgtccc ttctacttcg atcacgtcgc ggacctcgcg
      841 gaccgcgcct tcgccgagta cgccgccctc accgggcgcc actacgcgcg cgcggcgggc
      901 tatcgactcg aggacgcgga gtgggtgatc gccggccagg ggagcgtggt gtcgaacgcc
      961 gaggcggtgg tggaccacct gcgcgcgacg cgcgggctga aggtgggcgt gctcgacctc
     1021 acgatgttcc gccccttccc ggccgacctc gtgacccgcc tgctcgccgg caagcgcggc
     1081 gtggtggtgc tcgagcgcac cgaccagccg ctggcggtgg atgcaccgct gctgcgcgag
     1141 ctgcgcgccg ccatggcgca ggcggtggag aacggccggg cgcgcgacga ggccgagccg
     1201 gggcgcaagc ggcgcacccg cgacgcggcg ccggcggcgc tcccgtatcc gaaggtcgcg
     1261 gcgatggcgc cgtcggaggt gcccgacttc ttctcgggct gcttcgggct cgggagccgc
     1321 gacctccagc cgggcgacat cgtggcggcg gtggagaaca tgctgccatc gggccaccgc
     1381 cggcggcagt tctatctcgg catcgacttc gtgcggccgg caacgcgcct gcccaagctc
     1441 cagatctggc aggaggagct gctcgagagc tatccgcacc tcgccgacct cgcgcttccc
     1501 gcggccggcg cgctggacct catgccggcg ggctcggtgg cggtgcgcat tcattccgtg
     1561 ggcggctggg gcgcgatcac gatgggaaag aacctgtcga tgaccgtgtt cgagctgttc
     1621 ggcatgcagg tgaaggcgaa cccgaaatac ggctcggaga agaagggtca gccaacgacc
     1681 ttctacgcga ccttcgcgca cgagccgatc cggctcaact ccgagctgaa gcacgtgaac
     1741 gtcgtgctct cgcccgatcc gaacgtcttc cggcactcga acccgctggc cgggctcgcc
     1801 gagggcggcg tgttcgtcat ccagagcgat gccgagccgc aggcgttctg gtcctcgctg
     1861 ccggcgagcg cgcggcacga gatcgtcgac cggaagatcc gggtgttcat cctggacgcg
     1921 ttccggatcg cggcgagcga agcgtcggac gtggagctcc gctatcgaat gcagggggcg
     1981 gcgttcatgg gtgccttctt cgccgcctcg cccctgctcg cgcaggagga gctcagcgag
     2041 ccggcgctgt tcgagggcat ccggtcgcag atgctcaaga agttcggcgg caagggtgag
     2101 cgcgtggtgg aggacaacct gcgcgtcatc cgccgcggct tcgacgagct gcgcccggtg
     2161 acggtggccg cggagccggc gcagggcgcc gacctcgccg ggaccgtgcc cgccatgccc
     2221 gccatcctgg acgtggacaa ggcgcagccg gggctcggca acccgggacg gttctgggag
     2281 caggtgtgcg tgacgtgcaa gctcggccag gacgtgctgg ccgatccgtt cgccgcgatc
     2341 agtg
//
LOCUS       DASSYW010000701         2499 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_419504, whole genome shotgun sequence.
ACCESSION   DASSYW010000701 DASSYW010000000
VERSION     DASSYW010000701.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2499)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2499)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2499
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_419504"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(109..666)
                     /gene="lspA"
                     /locus_tag="VFN38_11165"
     CDS             complement(109..666)
                     /gene="lspA"
                     /locus_tag="VFN38_11165"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: protein motif:HMM:NF013421.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HET9012366.1"
                     /translation="MRSRSNGLLFWPVLAVVALFDVVTKAIAVRELVPQRVPHDLLGS
                     VVRFTLVYNPGAAFGLHVGPQSRWIFTVLTIVALVILGRLYLATSRGDTPRVLALALV
                     CAGAVGNLLDRLRSDLGVVDFIDVGLGDSRWPTFNVADMAVSVGAVLLAWVLWQEDRA
                     LANGGMAAATPPLAGAAPADRGDLV"
     gene            complement(650..1081)
                     /locus_tag="VFN38_11170"
     CDS             complement(650..1081)
                     /locus_tag="VFN38_11170"
                     /inference="COORDINATES: protein motif:HMM:NF013427.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TraR/DksA C4-type zinc finger protein"
                     /protein_id="HET9012367.1"
                     /translation="MATSDSATKNNGKSKPMPKKQLQHFEKRLLEERKRVLKELGHYD
                     EAFGATSQESDGDLSSYSFHMADQGTDAMEREKAFLFASQEGRFLWHIDEALRRLYRS
                     PDTFGKCRNCGQDIAYERLDALPHARFCIACKQREEDAKSK"
     gene            complement(1083..>2499)
                     /locus_tag="VFN38_11175"
     CDS             complement(1083..>2499)
                     /locus_tag="VFN38_11175"
                     /inference="COORDINATES: protein motif:HMM:NF039585.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF5915 domain-containing protein"
                     /protein_id="HET9012368.1"
                     /translation="GTASPYRNVVVNNLVLDAEAKKMSKSRGNIVEPWGVFARHGVDA
                     TRLFLVSSSKVWEPRAFDEALIRQGAGRFLLTLHNIYGGIFAQYANFGWAPGDADPAP
                     AARPVLDRWVLSRLATVERRVDELMLAYDATAAARTIIEFVDGDVANWYVRQTRKRFY
                     DVEGADNRAAFATLHEVLVVVCRLLAPIAPFVTDWMHRELAGTSVHLAPYTRTTPAPA
                     DLPLERAMDAVRTLATLGRGAREQAGINVRQPLGRMVCVAPGVSEPALRELLPVLAAE
                     LNIKAIELATSGDALVTLEAKPNFRTLGKKFGKKTPLAAEAVSRFTSEHLRSFEQGGE
                     LVVTVDAETHGLEPDDLIIVRRASGSLVVQEQHGFFAAVDPAITAALRAEGVARETIS
                     RVQRMRKEAGLAVSDRIRLWISGDALVRESVETHRAWIAEEVLATALVVGEPRQVDNT
                     LARQSVDLDGIRADLALTRDE"
BASE COUNT          361 a          930 c          846 g          362 t
ORIGIN      
        1 ggaggtactg ctgggccagc agcttggtga ccagatcggc cgcgatgacg gcggccgccg
       61 tcccccagaa gaggcgcgcc gtggggcgag gcgacgtcgc gggccccgtc agacgagatc
      121 cccccggtcg gccggcgcgg cgccggccag gggcggcgtc gcggcggcca tgccgccgtt
      181 cgccagcgcc cgatcctcct gccagagcac ccaggccagc agcaccgccc ccacgctcac
      241 cgccatgtcg gccacgttga acgtcggcca gcgggagtcg ccgagcccca cgtcgatgaa
      301 gtcgacgacg cccagatcgg accgcagccg gtcgagcagg ttccccacgg cgccggcgca
      361 cacgagggcg agggccagca cccggggcgt atcgccccgg ctcgtcgcca ggtacagccg
      421 ccccaggatc acgagcgcga cgatggtgag cacggtgaag atccaccgcg actgcggccc
      481 cacgtggagg ccgaacgcgg cgccggggtt gtacacgagg gtgaaccgca cgacgctgcc
      541 gagcaggtcg tgcggcacgc gctgcggcac cagctcccgc accgcgatcg ccttcgtcac
      601 cacgtcgaac agggcgacga cggcgagcac gggccagaag agcagaccgt tacttcgact
      661 tcgcatcttc ctcgcgctgc ttgcaggcga tgcagaagcg ggcgtgcggc agcgcatcga
      721 gccgttcgta cgcgatgtcc tgcccgcagt tgcggcactt gccgaaggtg tcgggcgagc
      781 gatagagccg gcgcagcgcc tcgtcgatgt gccagaggaa gcgcccctcc tggctcgcga
      841 acaggaacgc cttctcgcgc tccatggcat cggtgccctg gtcggccatg tggaaggaat
      901 agctgctcag gtcgccgtcc gactcctgcg acgtcgcccc gaacgcctcg tcgtagtgtc
      961 ccagctcctt cagcacgcgc ttgcgctcct cgagcagccg cttctcgaag tgctggagct
     1021 gcttcttcgg catcggcttc gacttgccgt tgttcttcgt cgcgctgtct gacgtggcca
     1081 tgctactcgt ccctggttag ggcgaggtca gcgcggatcc cgtcgagatc caccgactgc
     1141 ctcgccagcg tgttgtccac ctgccgcggc tcgccgacca ccaacgccgt ggcgagcact
     1201 tcctccgcga tccaggcgcg gtgcgtctcc accgactccc gcacgagcgc gtccccggag
     1261 atccagaggc ggatgcggtc gctcaccgcc aatccggcct cctttcgcat acgctgtacc
     1321 cgactgatgg tctcgcgtgc caccccctcg gcccgcagtg ccgcggtgat cgcggggtcg
     1381 accgccgcga agaagccgtg ctgctcctgc accaccagcg agcccgaggc gcggcgcacg
     1441 atgatgagat cgtcgggctc cagcccgtgc gtctcggcgt ccaccgtcac caccagctcg
     1501 ccaccctgct cgaagctccg gaggtgctcg ctcgtgaagc gcgacacggc ctccgccgcg
     1561 aggggggtct tcttgccgaa cttcttgccg agcgtccgga agttcggctt cgcctcgagc
     1621 gtcacgagcg cgtcgccgct cgtcgccagc tcgatcgcct tgatgttcaa ctcggcggcg
     1681 agcacgggca acagctcgcg cagcgccggc tccgacacgc cgggcgcgac gcacaccatc
     1741 cggcccaggg gctgccgcac gttgatcccc gcctgctcgc gcgcgccgcg ccccagcgtg
     1801 gcgagggtgc gcacggcgtc catcgcccgc tccagcggca ggtcggccgg cgccggcgtc
     1861 gtgcgcgtgt agggggccag atgcaccgag gtccccgcca gctcgcggtg catccagtcg
     1921 gtgacgaacg gggcgatggg cgcgagcagc cggcacacca ccaccagcac ctcgtgcagc
     1981 gtggcgaacg ccgcgcggtt gtccgcgccc tccacgtcgt agaagcgctt gcgcgtctgg
     2041 cgcacgtacc agttggcgac gtcgccgtcg acgaactcga tgatcgtccg cgccgccgcc
     2101 gtggcgtcgt aggcgagcat cagctcgtcc acacgccgct cgacggtggc gaggcgcgac
     2161 agcacccagc ggtccagcac gggccgcgcg gcgggcgccg gatcggcgtc gcccggggcc
     2221 cagccgaagt tcgcgtactg cgcgaagatg ccgccgtaga tgttgtggag ggtgaggagg
     2281 aagcgtcccg cgccctgccg gatgagcgcc tcgtcgaacg cccgcggctc ccacaccttg
     2341 ctgctgctca ccaggaagag gcgcgtggcg tccacgccgt gccgggcgaa cacgccccac
     2401 ggctccacga tgttgccgcg gctcttcgac atcttcttcg cctcggcgtc gagcacgagg
     2461 ttgttcacca cgacgttgcg gtacggcgac gccgtgccg
//
LOCUS       DASSYW010000702         5289 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1774939, whole genome shotgun sequence.
ACCESSION   DASSYW010000702 DASSYW010000000
VERSION     DASSYW010000702.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 5289)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5289)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5289
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1774939"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(2..460)
                     /locus_tag="VFN38_11180"
     CDS             complement(2..460)
                     /locus_tag="VFN38_11180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012369.1"
                     /translation="MVRSFVPVLSLAALMAACSHNTTTAGSTIEPGAPNTSVADAGRD
                     GRGPGRGGPGGARADQALLRNITLSADQQQRVDTIRARYRTQMEQLRQQSGGDRDAMR
                     GQMRTMMEKQQAEIRDVLTADQQRQYDQNVADLRARMERGGGRPGGAPPQ"
     gene            complement(525..755)
                     /locus_tag="VFN38_11185"
     CDS             complement(525..755)
                     /locus_tag="VFN38_11185"
                     /inference="COORDINATES: protein motif:HMM:NF012621.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heavy-metal-associated domain-containing
                     protein"
                     /protein_id="HET9012370.1"
                     /translation="MITRLQIDGMTCQRCVQAVFTALTPVEGIQSATVTIGAATIEHD
                     GRATAQALREAIAVAGYDAIPAGENRRTLPVL"
     gene            858..1751
                     /locus_tag="VFN38_11190"
     CDS             858..1751
                     /locus_tag="VFN38_11190"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HET9012371.1"
                     /translation="MPSVAFLGLGAIGRPMAARLAHAAGVTLTVWNRSRDKADAFARE
                     HGTRAATSPADAARTADVVITCFPVSADVESLLDGADGLLAGMKQGTTLVDCTSGDPA
                     TSRRIAARLAERGVGFLDAPVSGGTSGAEQGTLTVMVGGDSALLDRVRPALEPFGKKI
                     VHCGPVGSGDALKSVNNALLAVHVWSTAEGLAALAKAGVKPDVALDVINASSGRSNAS
                     MNLFPERVLTRAFPRTFRLALLDKDVGIAAGVAREQKVPAPILQLTADLFRIAHTALG
                     ESADHVEAVKLVEQWAGQEIA"
     gene            1748..2998
                     /locus_tag="VFN38_11195"
     CDS             1748..2998
                     /locus_tag="VFN38_11195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase-like protein"
                     /protein_id="HET9012372.1"
                     /translation="MTAAAGPRAGVARQVESIRADFPALERREQGQPVAYFDGPGGTQ
                     VPRAVGEAVTDYLYRHNANTHWAYPTSAETDAMLGDARAVFADFFNASPADVSFGNNM
                     TTIAFHLARGLARGWSAGDEIVVTELDHHANVAPWRAVAKDRGLIVKTVRLNATSFRH
                     EPDDVARLIGPRPRLVAVGAASNALGTVTDVAQVCAVARDAGALSFVDAVHYAPHALV
                     DVEAIGCDFLACSSYKFYGPHAGILFGRAALVQALDVPKLEPAPEEAPERLETGTQNH
                     EGIVGAAAAVRWLASLADGGGARRERLARAYDALHERGDALTVRLWEGLASIDGVTLY
                     GPPPGTPRTPTVSFTVRGRSTEDVARALVRDGVYASNGDFYAATVAARLGRGADGFVR
                     AGAACYTTADEVDRLIDGIRRLTS"
     gene            complement(3052..4293)
                     /locus_tag="VFN38_11200"
     CDS             complement(3052..4293)
                     /locus_tag="VFN38_11200"
                     /inference="COORDINATES: protein motif:HMM:NF024598.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative glycoside hydrolase"
                     /protein_id="HET9012373.1"
                     /translation="MRLRRSPVPLVSLVLFTLAACSAVAEHASTTEGGSAGGADSSAT
                     LASATSTTSGGAVAAPDTAAATAANRTVAPIDVDKEFPVVRALYVNRFKAQSAKRMAE
                     YIRIADETEINALVIDMKDEFGLNYKPANAEFARNAGTSGVIRNLPALLDTLRAHKIL
                     PIARLVVFKDSVTARVHPEWTIRKQDGSIWRDKKGLAWVNPYHHELWSYNIGLAEELA
                     KMGFGEIQFDYIRFPEPYPSLPQQVFPDNKGVPKPDVLASFLKEANARLDKVGARTTA
                     DIFGLVTTVGGPLEVGQWWEKISPNVDVVLPMVYPSHYPRGDLGLAVPNAEPYKVLNI
                     SLTRARQRDQKLGITKAEHVRPWLQAFTLGKPPYGAAEVEAQKKGAYDAGYDGWVLWS
                     PGSKYEPFLPALEKTLVSRKK"
     gene            4401..>5289
                     /locus_tag="VFN38_11205"
     CDS             4401..>5289
                     /locus_tag="VFN38_11205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012374.1"
                     /translation="MRSPFRRSAPPLFALLLALSACGQGAPEPAAPPPPAAEFVLAAG
                     DSSFWIRSAGGAIQMRGAPLELAIADGRIYELYVADDDRSYQDAVLVGQKVYRRDLAT
                     GDSLLLFQDTVVTHLARLYGRTHPEDEPLRGNDEPPDDPLWMAMSSLDLDEVAGPFVS
                     YSLHIDVERDDMDPWHTSRRGVLDIRTGRPATLAAVTGRAQAAVERARARVFRSTIDS
                     VRASRDERGERAAALLPYYRLDPASFSVTTIDGAPAVAYAVPGAGNGDAGHLLALAPI
                     PIGEPAWWTEAAPTLPVSSV"
BASE COUNT          712 a         1920 c         1845 g          812 t
ORIGIN      
        1 cctactgcgg cggggcgccc cccggacggc cgccaccgcg ctccatgcgg gcgcgcaggt
       61 cggccacgtt ctggtcgtac tggcgctgct ggtcggcggt gaggacgtcg cggatctccg
      121 cctgctgctt ctccatcatc gtgcgcatct ggccgcgcat cgcgtcgcgg tcgccgccgc
      181 tctgctggcg cagctgctcc atctgcgtgc ggtagcgcgc gcggatcgtg tcgacccgct
      241 gctgctggtc ggcgctcagg gtgatgttgc ggagcagcgc ctggtcggcg cgggcgccgc
      301 ccgggccgcc gcgaccggga ccgcggccat cgcggccggc gtcggcgacg ctcgtgttgg
      361 gcgcgccggg ctcgatagtc gaaccggcgg tcgtcgtgtt gtgcgagcac gccgccatca
      421 gcgcggcgag cgaaaggacg ggaacgaaac tgcgaaccat gactcctcct ggatgagtgc
      481 tgctccaggt cgtacaccgg cgaccgcgcg aggtgttggc gccgtcagag caccggcagc
      541 gtccggcggt tctcgccggc ggggatcgcg tcgtagcccg ccacggcgat cgcctcgcga
      601 agcgcctgcg ccgtcgcgcg cccgtcgtgc tcgatcgtcg ccgcgccgat cgtcacggtg
      661 gccgactgga tgccctccac gggtgtgagc gcggtgaaga ccgcctgcac gcagcgctga
      721 caggtcatgc cgtcgatttg gagccgtgtg atcatgaccg aatatcgccg gatggcgccg
      781 ccggcggaac gaggcgctcg cgttgacgct gcccgcgtcg ccgggcgaga ttccggctcg
      841 cctccagccc actcgcaatg ccttccgtcg ccttcctcgg gctcggcgcc atcggccgtc
      901 cgatggctgc ccgcctcgcc cacgccgccg gcgtgaccct caccgtctgg aaccggtcgc
      961 gcgacaaggc cgacgccttc gcccgcgagc acggcacacg tgccgcgacg tcgccggccg
     1021 acgccgcgcg caccgccgac gtcgtcatca cctgcttccc cgtctcggcc gacgtcgagt
     1081 ccctcctcga cggcgccgac ggcctgctgg ccgggatgaa gcagggcacg acgctggtgg
     1141 actgtacctc cggcgatccc gcgacgtcgc ggcgcatcgc cgcgcggctc gcggagcggg
     1201 gcgtgggatt cctcgatgcg cccgtcagcg gcggcacgag cggcgcggag cagggcacgc
     1261 tcacggtgat ggtgggcggc gactcggcgc tgctggaccg ggtgcgcccc gcactcgagc
     1321 ccttcggcaa gaagatcgtc cactgcggcc cggtggggtc gggcgacgcg ctcaagtcgg
     1381 tgaacaacgc gctgctcgcg gtgcacgtgt ggagcacggc cgaagggctc gcggcgctcg
     1441 cgaaggccgg cgtgaagccc gacgtggcgc tcgacgtcat caatgcgtcg agcgggcgat
     1501 ccaacgcgtc gatgaacctc ttccccgagc gcgtgctgac gcgcgcgttc cctcgcacct
     1561 tccgcctcgc tctgctcgac aaggacgtcg ggatcgcggc cggggtggcg cgcgagcaga
     1621 aggtgccggc acccatcctt cagctcaccg ccgacctctt tcgcatcgcg cacaccgcgc
     1681 tcggcgaatc cgccgatcac gtcgaggcgg tgaagctcgt ggagcagtgg gccggccagg
     1741 agatcgcatg accgccgccg cgggtccgcg cgcgggcgtc gcgcgccagg tcgagtccat
     1801 ccgcgccgat ttccccgcgc tcgagcgccg ggagcaggga cagccggtcg cctacttcga
     1861 cggaccgggg ggcacgcagg tgccgcgcgc cgtcggcgag gcggtgaccg actacctgta
     1921 tcggcacaac gcgaacacgc actgggcgta tcccaccagc gccgaaacgg acgcgatgct
     1981 cggcgacgcg cgcgcggtgt tcgccgactt cttcaacgcc agcccggccg acgtgtcgtt
     2041 cggcaacaac atgacgacga tcgccttcca cctcgcgcgc gggctcgcgc gcggatggtc
     2101 ggcgggcgac gagatcgtcg tgaccgagct cgatcatcac gcgaacgtgg caccatggcg
     2161 cgccgtcgcg aaggatcgtg gcctcatcgt gaagacggtg cgcttgaacg cgacctcctt
     2221 ccgtcacgag ccggacgacg tcgcccgact gatcggcccg cgcccgcggc tcgtggcggt
     2281 cggcgcggcg tccaatgcgc tgggcaccgt caccgacgtc gcgcaggtgt gcgccgtggc
     2341 gcgcgacgcg ggcgcgctgt cgttcgtcga cgcggtgcac tacgcgccgc atgcgctcgt
     2401 cgacgtcgag gcgatcggct gcgacttcct cgcctgctcg tcgtacaagt tctacggccc
     2461 gcacgccggc atcctgttcg gccgcgccgc cctcgtgcag gcgctcgacg ttcccaagct
     2521 ggagcccgcg ccggaagagg cgccggagcg gctcgagacc ggcacgcaga accatgaagg
     2581 gatcgtcggc gcggcggcgg cggtgcgctg gctggcctcg ctcgccgacg gcggcggcgc
     2641 gcggcgcgag cggctggctc gcgcgtacga cgccctgcac gagcgtggcg atgcgctcac
     2701 ggtgcgactc tgggaagggc tcgcgtcgat cgacggcgtg acgctctacg gaccgccgcc
     2761 gggcacgccg cgcacaccca ccgtctcgtt caccgttcgg ggacgctcca ccgaagacgt
     2821 cgcgcgcgcc ctcgtgcgcg acggcgtcta cgcgtccaac ggcgatttct acgcagcgac
     2881 ggtggcggcg cgccttggcc gcggcgccga cggattcgtg cgggccggtg cggcctgcta
     2941 caccaccgcc gacgaggtgg accgcctcat cgacggcatc cggcgcctga cgtcctgaac
     3001 ggagcgaggg acctgcacgc gcaggtccct cgctttgctc ggaacgaccg actacttctt
     3061 ccgcgacacc agcgtcttct cgagggccgg caggaacggc tcgtacttgg agccgggact
     3121 ccacagcacc cagccgtcgt agcccgcgtc gtacgcgccc ttcttctgcg cctcgacctc
     3181 cgccgcgcca tagggcggct tgccgagcgt gaaggcctgc agccacggcc gcacgtgctc
     3241 ggccttggtg atgcccagct tctggtcgcg ctgccgggcg cgcgtcagcg agatgttcag
     3301 caccttgtac ggctcggcat tcgggaccgc gaggcccaga tcgccgcgcg ggtagtgcga
     3361 cggatagacc atcggcagca ccacatccac gttcggcgag atcttttccc accactggcc
     3421 cacctcgagc ggacctccca ccgtcgtcac cagtccgaag atgtcggcgg tcgtgcgcgc
     3481 gccgaccttg tccagccgcg cattcgcttc cttgaggaac gatgcgagca cgtcgggctt
     3541 gggcacgccc ttgttgtcgg ggaacacctg ctgcggcagc gacggatagg gctccggaaa
     3601 ccggatgtag tcgaactgga tctcgccgaa gcccatcttc gccagctctt ccgcgagccc
     3661 gatgttgtac gaccacagct cgtgatgata cgggttcacc cacgcgagcc ccttcttgtc
     3721 acgccagatg ctgccgtcct gcttgcggat cgtccactcc ggatgcacgc gcgccgtcac
     3781 cgaatccttg aacacgacga gccgcgcgat cggcaggatc ttgtgcgcgc gcagcgtgtc
     3841 gagcagcgcg ggcaggttcc ggatcacccc ggacgtgccc gcattcctcg cgaactcggc
     3901 attcgccggc ttgtagttga gcccgaactc gtccttcatg tcgatgacga gggcgttgat
     3961 ctccgtctcg tcggcgatcc tgatgtactc cgccatccgc ttggcgctct gcgccttgaa
     4021 gcggttcacg tacagcgcgc gaaccacggg gaactccttg tccacgtcga tcggcgccac
     4081 ggtgcggttg gccgccgtcg ctgcggccgt gtccggtgcc gccacggcac cgccgctcgt
     4141 cgtactggtg gcggaggcga gcgtcgcgga ggaatcggcg ccgcccgccg agccaccctc
     4201 ggtggtggag gcgtgctccg cgaccgccga acaggcggcg agggtgaaca ggacgagcga
     4261 aacgagcggg acgggcgaac gacgcagacg cacgggcgga tccgggaatg ggaatggcga
     4321 aatgtagttg ggccgtgaga tcagcagtgg cagctttcgc gccgtcggca cgagagcgcc
     4381 gagttgtata tttcacgttc atgcgttcgc cgtttcgccg gtccgctcca cccctcttcg
     4441 cgctgctgct cgcgctgtcg gcctgcggtc agggcgcgcc cgagccggcg gcaccgccgc
     4501 cgccggccgc cgagttcgtg ctcgccgcgg gcgactcgtc gttctggatc cggagcgcgg
     4561 ggggcgcgat ccagatgcgc ggcgctccgc tcgagctggc catcgccgac ggacgcatct
     4621 acgagctgta cgtggcggac gacgaccgct cctatcagga tgcggtgctg gtgggccaga
     4681 aggtgtatcg ccgagacctc gccaccggcg attcgctcct gctcttccag gacacggtcg
     4741 tgacgcacct cgcccggctc tacggtcgga cgcacccgga agacgagccg ctccgcggca
     4801 acgacgagcc gccggacgac ccgctctgga tggcgatgtc gtcgctcgat ctggacgagg
     4861 tggcgggccc cttcgtgtcg tactcgctcc acatcgacgt cgagcgcgac gacatggatc
     4921 cctggcacac gagccggcgc ggcgtgctcg atatccgcac cgggcggccg gcgacgctgg
     4981 ctgccgtgac ggggcgcgca caggcggcgg tcgagcgcgc gcgcgcgcgc gtcttccgct
     5041 ccacgatcga ctccgttcgc gccagtcgcg acgagcgcgg tgagcgcgcc gcggcgttgc
     5101 tcccgtacta tcgcctcgat ccggccagct tctcggtcac cacgatcgac ggcgcaccgg
     5161 cggtcgccta cgccgtgccg ggcgccggca atggcgacgc cggtcatctc ctcgctctgg
     5221 cacccattcc catcggcgag cccgcctggt ggacggaagc ggcgcccacg ctccccgtct
     5281 cgtccgtgg
//
LOCUS       DASSYW010000703         2454 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1107786, whole genome shotgun sequence.
ACCESSION   DASSYW010000703 DASSYW010000000
VERSION     DASSYW010000703.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2454)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2454)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2454
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1107786"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..307)
                     /locus_tag="VFN38_11210"
     CDS             complement(<1..307)
                     /locus_tag="VFN38_11210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012375.1"
                     /translation="MKWAAVLTVLLASAVSGGREGQSSGQPDWARVQEETLQHFQALL
                     RLDTSNPPGNERLAVEYIKQLFDREGIPSDVRALDQSRSNLVARLKGTGRKRPVLIMG
                     "
     gene            complement(347..>2454)
                     /locus_tag="VFN38_11215"
     CDS             complement(347..>2454)
                     /locus_tag="VFN38_11215"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HET9012376.1"
                     /translation="FRLRIAPDGKVLREETEPNGGQWWSAQDNYGKTWWVDGGGEIGP
                     VNFQVPIAYGAINVADNFEPDFQVPWPAPGGIADMQGGMMRVRMPEGTLNHFTAASGV
                     EIYRARHLPEDTIGDLFFTEPVGRIVRRAKVVVSQGLTQLRNAYPKSEFIRSTDPLFR
                     PVNVTTAPDGSLLVIDMYTGIIQDAQFVGPDSYLRRKIDQYELDKQHNWGRIWRVTYD
                     GRARDRRQPRMYAETTAQLVKHLEDPSGWWRDTAQKLLVLRQDKSVTTSLVTMARSSR
                     NQLARMHALWTLEGLGALDAALARELMKSPDPAIRVQAIRASESLYKGTKGDKSFAND
                     YKALAKDPSHDVVIQALLTINLHKIDGHTALIESTMAASNVRGVKEIGAQLLKPGGSR
                     GQPAAFADPALAGSFGLPVEARRSLQRGAAIYTELCGTCHGPDGKGTPMAGATDGTTL
                     APPLAGAPRVLGHRDYITKVLLHGLTGELDGKNYPGGVMAPMGTNTDEWIADVASFVR
                     RSFGNSAPFITPAQVAAVRKANPRTSMWSYSELASTTPMPLLNQSEWKASASHNPAAA
                     QDGINGSGDTRWATTESQTPGMWYQIELPQPVSVAEIVVDSSTSGAAMNFGRGRGGRG
                     GGIPALGMAGYRVQVSMDGSTWSEPLAEGQGQVQSASVVISVPLTRAKFIRITQTGTP
                     PGQFQFGWAIQRVRIFAIQ"
BASE COUNT          356 a          826 c          845 g          427 t
ORIGIN      
        1 ggcccatgat gagcacgggc cgcttgcggc cggtgccctt cagccgcgcg acgaggttgg
       61 agcggctctg atcgagcgcg cgaacatccg acgggatgcc ctcgcggtcg aagagctgct
      121 tgatgtattc gaccgcgagg cgctcgttgc cgggcggatt gctcgtatcc agtctgagga
      181 gcgcctggaa atgctggagc gtctcttcct ggacgcgcgc ccagtcaggc tggccggagg
      241 attgaccttc tcggccgccg gacacggccg acgcgagaag caccgtcagc acggccgccc
      301 acttcattcc ttcctcctgc tcatgtcctg cggcgagtgc cgcgccctat tgaatcgcga
      361 agatgcgcac gcgctggatc gcccagccga actggaactg ccccggcggc gtcccggtct
      421 gggtgatgcg gatgaacttg gcgcgcgtga gcgggaccga gatcacgacg ctggcgctct
      481 ggacctgtcc ctggccttcg gccaacggct cgctccaggt cgacccgtcc atcgacacct
      541 gaaccctgta ccccgccatc ccgagggccg gaatgccgcc gccgcgtccg ccgcgcccgc
      601 ggccgaaatt catggccgca ccgctcgtgg aggaatcgac gacgatctcg gcgacggaaa
      661 cgggctgcgg cagctcgatt tggtaccaca tgcccggcgt ctgcgactcg gtcgtggccc
      721 accgcgtgtc gccgctgccg ttgatgccat cctgggcggc cgcggggttg tggctcgcgg
      781 acgctttcca ctccgactgg ttgaggagcg gcatcggcgt cgtcgacgcg agctccgagt
      841 acgaccacat cgacgtccgc gggttggcct tgcgcaccgc ggcgacctgc gccggcgtga
      901 tgaagggcgc gctgttgccg aaggagcggc gcacgaagct cgcgacgtcg gcgatccatt
      961 catcggtgtt ggtgcccatc ggcgccatga cgccgccggg atagttcttg ccgtcgagct
     1021 cgcccgtcaa cccgtgcagc aggaccttcg tgatgtagtc gcgatgcccg agaacacgcg
     1081 gagcgccggc aagcggcggc gccaacgtcg tgccgtcggt tgcaccggcc atcggcgtgc
     1141 ccttgccgtc gggcccatga caggttccgc acagctccgt gtagatcgcg gcgccgcgct
     1201 gcagcgaacg ccgcgcttcg accggcaggc cgaacgatcc ggccagcgcc gggtcggcaa
     1261 atgccgccgg ctgcccgcgc gagccgcccg gcttcagcag ctgcgcgcca atctccttca
     1321 cgcctctgac gttgctcgcc gccatcgtcg attcgatgag cgcggtgtgg ccgtcgatct
     1381 tgtgcaggtt gatggtcagc agcgcctgaa tgacgacgtc gtggctggga tccttggcca
     1441 gggccttgta gtcattggcg aaggacttgt cacccttcgt ccccttgtac aacgactcgc
     1501 tcgcgcggat cgcctgcacg cgaatcgcag gatcggggct cttcatcagc tcgcgcgcga
     1561 gcgcggcgtc gagcgcgccg agcccttcga gcgtccacag cgcgtgcatg cgcgccagct
     1621 ggttgcgcga cgatcgcgcc atcgtcacca gcgacgtcgt gacggacttg tcctggcgga
     1681 gcacgagcag tttctgggca gtgtcgcgcc accagccgct cggatcctcg agatgcttga
     1741 cgagctgcgc ggtcgtctcc gcgtacatgc gcggctgccg gcggtcgcgt gcgcgcccgt
     1801 cgtaggtgac gcgccagatg cggccccagt tgtgctgttt gtcgagctcg tactggtcga
     1861 tcttgcgacg cagataggag tcggggccga cgaactgcgc gtcctggatg atgccggtgt
     1921 acatgtcgat cacgagcagc gagccgtccg gcgcggtggt gacgttgacg ggacggaaca
     1981 gcggatccgt cgatcgaatg aactccgatt tggggtacgc gttgcgcagc tgcgtcagtc
     2041 cctgcgacac gacgaccttg gcgcggcgca cgatgcggcc gacgggctcg gtgaagaaga
     2101 gatcgccgat cgtgtcctcc ggcaggtgcc gggcgcgata gatctcgacg ccggaggcgg
     2161 cggtgaagtg attgagcgtg ccctcgggca tacgcacgcg catcatgccg ccttgcatgt
     2221 cggcgatgcc gccgggagcc ggccacggta cctggaagtc gggctcgaag ttgtcggcga
     2281 cgttgatcgc gccgtacgcg atcggcacct ggaagttgac cgggccgatc tcgccgccgc
     2341 cgtcgaccca ccatgtcttg ccgtagttgt cctgcgcgga ccaccactgg ccgccgttcg
     2401 gttcggtctc ctcgcggagc accttgccgt ccggggcgat gcgcaggcgg aacg
//
LOCUS       DASSYW010000704         2872 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_186629, whole genome shotgun sequence.
ACCESSION   DASSYW010000704 DASSYW010000000
VERSION     DASSYW010000704.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2872)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2872)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2872
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_186629"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1187
                     /locus_tag="VFN38_11220"
     CDS             <1..1187
                     /locus_tag="VFN38_11220"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HET9012377.1"
                     /translation="FRRERRSYHSFDAINRTHRDANVDSIFYYAVFYPAIEIIGALAA
                     ALLIWFGGVWTLAGTLTLGSLVAFLLYSQRFFRPISDMSEKFNVLQAAMASAERIFKL
                     LDTEAKIGSPLAARRPPSDNVLPEPEQRAASRGGTGHIAFDHVWFAYNDDDFVLHDVS
                     FEVRPGERVGVVGATGSGKTTLINLLLRFYDVRRGRILIDGVDIREMPLEALRRMFSL
                     VLQDVHLFSGTIADNIRLGNRAVGDDDVRRAAATVHADRFIEHLPQGYDSPVAERGAT
                     LSVGQKQLLSFARALAFDPAVLVLDEATSSVDTETEMLIRDALHVLMAGRTTIAIAHR
                     LSTIQDMDKILVLHKGEIREAGTHQELLARRGLYFKLYQLQYKDDDVEGKLEPAASGD
                     VH"
     gene            complement(1320..1838)
                     /locus_tag="VFN38_11225"
     CDS             complement(1320..1838)
                     /locus_tag="VFN38_11225"
                     /inference="COORDINATES: protein motif:HMM:NF018437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3D domain-containing protein"
                     /protein_id="HET9012378.1"
                     /translation="MFLSRSTGRKIVATATAAVTFALLYEVTTLDSRYAARQAELRDG
                     PPTPGARLRFTATAYCKGTTTASGVNVRTGIAAADPDLLPVGSVVQIDRLGERYNGIY
                     TIMDTGPKVQGRHIDIYMWSCNEALELGRRSIQVVVLRLGWNPKASSPRLVDRLFRQR
                     ERTLDPQPPSPQ"
     gene            complement(1916..2419)
                     /locus_tag="VFN38_11230"
     CDS             complement(1916..2419)
                     /locus_tag="VFN38_11230"
                     /inference="COORDINATES: protein motif:HMM:NF021363.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2062 domain-containing protein"
                     /protein_id="HET9012379.1"
                     /translation="MLGRSRIRGWLEQLLHTHDTPRRTAAAFALGVFLGFSPLLGLHA
                     ILGLALAFLFGLNRVAVILGVYSNLPWILPAYYTFATLAGAAMLGLDVQPRAIREVIG
                     AIAATAWHNPREVARILTPYFWAYTVGSTIGAAILAGITYYVALAMIQAHRRHQEARH
                     KDPPPEG"
     gene            complement(2426..>2872)
                     /locus_tag="VFN38_11235"
     CDS             complement(2426..>2872)
                     /locus_tag="VFN38_11235"
                     /inference="COORDINATES: protein motif:HMM:NF014788.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AIR synthase-related protein"
                     /protein_id="HET9012380.1"
                     /translation="PDEGAIAECVRWYRRPEPRTRLGALLGRTRAASACMDLSDGLAD
                     AVRQVAAASGVGARIDAGTLPVHPGAARWFEASGQDALRASLTGGDDYELLIAVPRRR
                     RGRLRTVISQARGVPLTRIGELTADPDLVLRRDGALEALPEGFVHF"
BASE COUNT          455 a          987 c          991 g          439 t
ORIGIN      
        1 tctttcgccg cgaacgccgc agctaccaca gcttcgacgc gatcaaccgg acgcaccgcg
       61 acgccaacgt cgactcgatc ttctactatg cggtcttcta tcccgcgatc gagatcatcg
      121 gcgcgctcgc cgcggcgctc ctgatctggt tcggcggcgt ctggacgctc gcaggcacgc
      181 taacgctcgg ctcgctggtg gcgttcctgc tctactcgca gcgcttcttc cggccgatca
      241 gcgacatgtc ggagaagttc aacgtcctgc aggcggccat ggcctccgcg gagcggattt
      301 tcaagctgct ggacacggag gccaagatcg ggtcgccgct cgcggctcgc cgcccgccgt
      361 ccgacaacgt tctgccggaa cccgaacagc gagccgcgag ccgcggcggc accgggcaca
      421 tcgccttcga tcacgtctgg ttcgcctaca acgacgatga cttcgtgctg cacgacgtgt
      481 cgttcgaagt gcggccgggc gagcgcgtcg gcgtcgtcgg cgccaccggc tcggggaaga
      541 cgacgctcat caacctgctg ctgcggttct acgacgtgcg ccgcgggcgg atcctgatcg
      601 acggcgtcga catccgcgag atgccgctcg aggcgctgcg gcggatgttc agcctggtgc
      661 tgcaggacgt ccacctgttc tcgggaacga tcgccgacaa catccgcctc ggcaaccgcg
      721 ctgtcggcga cgacgacgtg cgccgcgcgg cggcgaccgt gcacgccgac cgcttcatcg
      781 agcacctgcc gcagggatac gacagccccg ttgccgagcg cggcgcgacg ctctcggtgg
      841 ggcagaagca actgctgtcg ttcgcgcgtg cgctcgcgtt cgaccccgcc gtcctggtcc
      901 tcgacgaagc gacgtcgagc gtcgataccg agacggagat gctgatccgt gacgccctgc
      961 acgtcctgat ggccggacgg acaacgatcg cgatcgcgca ccgcctgtcg acgattcagg
     1021 acatggacaa gatcctggtc ctgcacaaag gcgagatccg cgaggccggc acgcaccagg
     1081 agctgctcgc ccgccggggg ctctacttca agctctatca gctgcagtac aaggacgatg
     1141 acgtggaagg gaagctggag cctgcggcca gcggcgacgt tcactgatcg acgacgttcc
     1201 ctgaaaaaga gcgctgcctc acccgccagt gcacgggcct gaccgttgaa cctcgggagg
     1261 catttccact gtcgttggaa tgtcgaaagt gcgcgacggc tcaggcgccg aacgggcgtt
     1321 cactgcggac tgggcggctg cggatccaga gtgcgctctc tctgcctgaa caggcgatcc
     1381 accaggcgcg gcgagctggc tttggggttc cagccgagcc gcagcacgac gacctggatc
     1441 gagcggcgcc cgagctcgag cgcctcgttg cagctccaca tgtagatgtc gatgtgccgg
     1501 ccctgcacct tcgggccggt gtccatgatc gtgtaaatcc cgttgtagcg ttcgccgagc
     1561 cggtcgatct ggacgaccga gccgaccggc agcagatcgg gatccgccgc ggcgatgccg
     1621 gtgcggacgt tgacgccgga cgcggtcgtc gtgcccttgc aataggccgt ggcggtgaac
     1681 cgcaggcggg cgccgggcgt cggcggcccg tcgcggagct ccgcctgccg ggccgcatac
     1741 cgcgaatcca gcgtggtgac ctcgtagaga agcgcgaacg tgacggcggc cgtggctgtc
     1801 gccacgatct tgcgtccagt ggaacgcgac aggaacatgg ctgactgcgt tggggggccc
     1861 cctcactata ccggcgaggc ccgccgaggt caaagctcag gttagggcaa atgggctagc
     1921 cttcgggcgg gggatccttg tgccgcgcct cctggtgccg gcggtgcgcc tggatcatcg
     1981 cgagggcgac gtaataggtg atccccgcca gaattgcggc gccgatcgtc gaccccacgg
     2041 tgtaggccca gaaatacggc gtcaggatgc gcgccacctc gcgcggattg tgccaggcgg
     2101 ttgcggcgat ggcgccgatg acctcccgga tggcgcgcgg ctggacgtcg agacccagca
     2161 ttgccgcgcc ggcgagcgtt gcgaacgtgt agtaggcagg caggatccac ggcaggttcg
     2221 aatagacccc gagaatcacc gccacgcggt tcaggccgaa caggaaggcc agggccagtc
     2281 cgagaatggc gtgcagcccg agcagcggcg aaaacccgag gaagaccccc agtgcgaacg
     2341 ccgccgccgt gcgccgcggc gtgtcgtgtg tgtggagcag ctgttcgagc cagccgcgga
     2401 tgcgtgacct gccgagcatg cgcgcctaga aatggacgaa gccttcgggc agcgcttcga
     2461 gcgcgccgtc gcggcgcagc acgaggtcgg gatcggccgt gagctcgccg atgcgcgtca
     2521 gcggcacgcc gcgggcctgg ctgatcaccg ttcgcagccg tccgcggcgt cgcctgggca
     2581 cggcaatcag caactcgtag tcgtcgccgc ccgtcaggct tgctcgcagc gcgtcctgcc
     2641 ccgacgcttc gaaccaccgc gccgcgcccg ggtgcaccgg cagcgtcccg gcgtcgatgc
     2701 gcgcgccgac gccgctggcg gcagcgacct ggcgcaccgc gtcggccagg ccgtcgctca
     2761 ggtccatgca ggcgctggcc gcgcgcgtcc ggccgagcag cgcgccgagt cgcgtccgcg
     2821 gctcgggccg tcggtaccac cgcacgcact ccgcgatcgc gccctcgtcg gg
//
LOCUS       DASSYW010000705         2292 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1125746, whole genome shotgun sequence.
ACCESSION   DASSYW010000705 DASSYW010000000
VERSION     DASSYW010000705.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2292)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2292)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2292
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1125746"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1010)
                     /locus_tag="VFN38_11240"
     CDS             complement(<1..1010)
                     /locus_tag="VFN38_11240"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HET9012381.1"
                     /translation="MRLTTVGVALAGSFTSASVATARAQAMLPPPLELRVPKAPTVAT
                     GAEGAFLAYELHVTNFGAQPLTLRTVEVITADRTRRVLFTLSDSTLAQSLARPGVTLA
                     AAERPRIAGGMRGVVYLWMPVDTSAVPTSFRHRVRVEQGAGDSLRVQELEGPVVPVRH
                     AGPVIGPPLRGGPWLSGNGPNARSGHRRALVSTGGTPAIAQRFAIDFVKLNDSNTTFH
                     DDRLRNENYYAEGDDALAVADGRVVAMKDSIPENVPGVNSRAVPITLETVGGNHVILD
                     IGGGYYAFYAHLRPGSLRVRVGDRVRRGQVVGLVGNSGNSTEPHLHFHVSDADSPLGS
                     EGV"
     gene            complement(1016..>2292)
                     /locus_tag="VFN38_11245"
     CDS             complement(1016..>2292)
                     /locus_tag="VFN38_11245"
                     /inference="COORDINATES: protein motif:HMM:NF019592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /protein_id="HET9012382.1"
                     /translation="TVLASACSEITSLKQENPGLLSVETLYVPANAPLLVNGAISDFE
                     CAYSRYVVGTGLFTDELTVAISATANFDYDARRLLTNATYGTNHCQSPTPSSSQQPGI
                     YTPLSTARATADTAGVKLEGWTDAEVPNRQKLIGQAYAYAGYSLTLMGEAMCSAAINL
                     GPEIQPPALFTEAVARFTKAIAAATTANDATTLNLARVGRARARLNLGGTANLDAAAA
                     DAALVPATFVVNTSPDAVNTRRQNTVFVTIAQSSFTTVDPAYRNVLVPGGTTQDPRVA
                     VTDLGRSGTATGSRLFIPTKDNALTAPIRLASYAEAQLIIAENAAATGDINGAVTAIN
                     NARSRTAGVPAYVAPAGATAADIRAQIIEERRREFFVEGHRLGDMRRYGIAFTPAAGT
                     AYQFGGVYGTQTCFPLPDVERINNPAIAGATP"
BASE COUNT          301 a          778 c          863 g          350 t
ORIGIN      
        1 acgccctcgc tcccgagcgg cgagtccgcg tcggatacgt ggaagtggag atgcggctcg
       61 gtggagttgc cggagttgcc gacgaggccc accacctgcc cgcgtcgcac gcgatcgccg
      121 acccgcacgc ggagggagcc gggccggaga tgggcataga acgcgtagta gccgccgccg
      181 atgtcgagga tcacgtggtt gccgcccacc gtctcgaggg tgatgggcac ggcccgcgag
      241 ttcacgccgg ggacgttctc cggaatgctg tccttcatcg cgaccacccg cccgtccgcc
      301 acggcgaggg cgtcgtcgcc ctccgcgtaa tagttctcgt tccggagccg gtcgtcgtgg
      361 aaggtggtgt tcgagtcgtt cagcttcacg aagtcgatgg cgaagcgctg ggcgatggcg
      421 ggggtgccgc ccgtggagac gagcgcgcgc cggtggcccg accgcgcgtt cggcccgttg
      481 ccggagagcc acggcccgcc gcggagcggc ggaccgatca ccggaccggc gtgccgcacc
      541 ggcaccacgg gtccttccag ctcctgcacg cgcaggctgt cgcccgctcc ctgctccacc
      601 cgtacgcggt ggcggaacga cgtgggcacc gcgctcgtgt cgaccggcat ccacaggtac
      661 acgacgccgc gcatgccgcc ggcgatgcgc ggacgctccg ccgctgccag ggtgacgccc
      721 ggccgcgcga ggctctgggc cagcgtgctg tccgacaggg tgaagagaac ccgccgcgtc
      781 cggtcggcgg tgatcacctc cacggtgcgg agggtgagcg gctgcgcgcc gaagttcgtg
      841 acgtgcagct cgtacgcgag gaaggcgccc tccgcgccgg tggcgaccgt cggcgccttc
      901 ggcacgcgca gctcgagcgg cggcggaagc atggcctgcg cccgcgccgt cgccacactc
      961 gccgaggtga acgaaccggc gagcgcgact ccgaccgtcg tgaggcgcat cgcgatcatg
     1021 gcgtcgcccc ggcgatggcc gggttgttga tccgctcgac gtccggcagc gggaagcagg
     1081 tctgcgtgcc gtagacgccg ccgaactggt acgccgtgcc cgccgcgggc gtgaaggcga
     1141 tgccgtagcg ccgcatgtcg ccgaggcgat ggccttccac gaagaactcg cggcggcgct
     1201 cctcgatgat ctgcgcccgg atgtcggccg cggtcgcgcc ggcgggcgcg acgtacgccg
     1261 gcacgccggc cgtacgcgat cgggcgttgt tgatcgccgt caccgcgccg ttgatgtcgc
     1321 cggtggccgc cgcgttctcc gcgatgatga gctgcgcttc ggcgtagctg gcgagccgga
     1381 tcggcgcggt gagcgcgttg tccttggtcg ggatgaacag gcgcgacccg gtggccgtgc
     1441 cactgcggcc gaggtccgtc accgcgacgc gcggatcctg cgtcgtgccg cccggcacga
     1501 ggacgttgcg atatgccggg tccaccgtgg tgaacgagct ctgcgcgatg gtgacgaaca
     1561 ccgtgttctg gcgacgcgtg ttcacggcgt cgggagaggt attgacgacg aaggtggcgg
     1621 gcacgagcgc cgcgtcggcc gcggcggcgt cgaggttggc cgtcccgccc aggttcagcc
     1681 gcgcgcgcgc ccgtccgacg cgcgcgaggt tgagcgtcgt cgcgtcgttg gcggtcgtcg
     1741 cggcggcgat agccttcgtg aatcgcgcca ccgcttccgt gaacagggcg ggcggctgga
     1801 tctccggacc gaggttgatc gccgcgctgc acatcgcctc gcccatgagc gtgaggctgt
     1861 acccggcata ggcgtacgcc tggccgatca gcttctggcg gttgggcacc tcggcatccg
     1921 tccagccttc gagcttcacc cccgcggtgt ccgccgtggc gcgggcggtg gagagcggcg
     1981 tgtagatccc cggctgctgg ctcgagctcg gcgtgggcga ctggcagtgg ttcgtgccgt
     2041 aggtggcgtt cgtgagcagc cggcgcgcgt cgtaatcgaa gttcgccgtc gccgagatcg
     2101 ccacggtgag ctcgtcggtg aagaggccgg tccccacgac gtacctcgag taggcgcact
     2161 cgaagtcgct gatggcgccg ttgacgagca gcggggcgtt ggccggcacg tacagcgtct
     2221 cgaccgaaag caggccggga ttctcctgct tgaggctcgt gatctcgctg caggccgacg
     2281 cgagcacggt ga
//
LOCUS       DASSYW010000706         2123 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1437394, whole genome shotgun sequence.
ACCESSION   DASSYW010000706 DASSYW010000000
VERSION     DASSYW010000706.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2123)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2123)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2123
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1437394"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..244
                     /locus_tag="VFN38_11250"
     CDS             <1..244
                     /locus_tag="VFN38_11250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012383.1"
                     /translation="ARARLDREAGAYYEVLLTDIGLPDGSGWDLVAFARERRPALRIG
                     VVTGWEPRNEQDPACDFTLRKPVGAEDLLDRIAGDG"
     gene            293..907
                     /locus_tag="VFN38_11255"
     CDS             293..907
                     /locus_tag="VFN38_11255"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ANTAR domain-containing protein"
                     /protein_id="HET9012384.1"
                     /translation="MPDSGSIRILIAEDDDNARALLVELLNTMGHVVVAEVTGGREAI
                     ERAIDVVPDVVLLDVHMPDGSGIEAAEQIAAQVPGVAVVLFSGDESIVLSEREIAATS
                     AIAFLPKPTPPRVLDSTLRLAVSRAREFSVAKKDAQAARGALENRKTIERAKGILMRR
                     TGSSEQEAYRILQRTSQDRSVPMVEIARAVLASEPGLAENTKDS"
     gene            complement(1097..>2123)
                     /locus_tag="VFN38_11260"
     CDS             complement(1097..>2123)
                     /locus_tag="VFN38_11260"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HET9012385.1"
                     /translation="AIAYVIFGFAHSLALLFISRLVQGAGGGTVSVIQAYVADATEPQ
                     DRAKALGWLSAATNAGVAIGPVLGSISSQWGRSAPGLFAAALCVLNMAFASRFLTESR
                     DMKEAAEAKANPAPRARSRDAIVHVVTHSAEPASRLIWIYAIAMGAFQGVTSMLALYL
                     AVRFNVTAKTIGFFFAYTGVISVLTRALILGRMVDKYGEARLSRFGSTLLAIGIASLA
                     FIRPLADPAGVAARLSLPWEVVAYLPYLPLALAVALLPLGTAFTFPCVTALLSRVISS
                     RERGLYMGVQQTFGGLARVCFPILFGWLFDRYLPLPFLLSSALVVLTIYLGLGMEAYT
                     KPAPIPA"
BASE COUNT          367 a          694 c          781 g          281 t
ORIGIN      
        1 ggcgcgcgcg cggctcgacc gcgaggcggg ggcgtactac gaggtcctgc tgaccgacat
       61 cggcctcccc gacggcagcg gatgggacct cgtggcgttc gcgcgcgagc gccggccggc
      121 gttgcgcatc ggcgtcgtga cggggtggga accgcgaaac gagcaggatc cggcgtgcga
      181 tttcacgctg cggaagccgg ttggcgcgga agatttgctg gatcgcattg cgggagacgg
      241 gtgagcacgt ccaaattcat cgcgggcgaa ctcttcacac tccacgaccg cgatgcctga
      301 ctcgggatcc atccgcatcc tcattgccga agacgacgac aacgcgcgcg cgctgttggt
      361 cgagcttctg aacacgatgg gccatgtggt cgtcgcggaa gtcaccggag gccgcgaagc
      421 gatcgagcgg gcgatcgacg tcgtgcccga cgtggtgctc ctcgacgtgc acatgcccga
      481 tgggtccggt atcgaggcgg ccgagcagat cgccgcgcag gtgccggggg tggcggtcgt
      541 gctgttcagc ggcgacgagt cgatcgtgct gtccgagcgc gagatcgcgg cgacgtcggc
      601 gatcgccttc ctccccaagc ccacgccgcc gcgggtgctg gattccacgc tgcgcctggc
      661 cgtatcgcgc gcccgtgagt tctcggtggc caagaaggac gcccaggccg cgcggggcgc
      721 gctggagaac cgcaagacga tcgagcgcgc caagggaatc ctgatgcggc gcacgggctc
      781 gtcggagcag gaggcctacc gcatcctgca gcggacgtcg caggaccggt cggtgccgat
      841 ggtggagatc gcgcgggcgg tgctggccag cgagcccggg ctcgccgaga acaccaagga
      901 cagctgaaca actgtcatcc cgcaggagcg agcgtagcga gcgagtgtcg ggatctaccg
      961 tcctcgttgc gtagccggcc actcgcgcag cgagagcaga tcccgacact cgctgcgctc
     1021 gtgcgggatg acggttggac tcgctgcgct cgtgcgggat gacggttgga ctcgctccgc
     1081 tcgtgcgcga tgacagctat gcgggtatcg gagccggctt ggtgtacgcc tccatcccca
     1141 accccaggta gatcgtcagc acgacaagcg ccgacgagag caggaagggg agcggcaggt
     1201 accggtcgaa cagccagccg aacaggatcg ggaagcagac gcgcgccagc ccgccgaagg
     1261 tctgctgtac gcccatgtac aatccgcgct cgcggctgga gatcacccgc gacagcagcg
     1321 ccgtcacgca cgggaaggtg aacgccgtgc ccagcggcag cagcgccacg gcgagcgcga
     1381 ggggcaggta cggcaggtag gccacgacct cccacggcag ggacagcctc gccgccacgc
     1441 ccgccgggtc ggcgagcgga cggatgaagg cgagcgacgc gatgccgatc gcgagcagcg
     1501 tggagccgaa gcgggacagc cgcgcttccc cgtacttgtc caccatccgt ccgaggatca
     1561 gcgcgcgggt gagcacgctg atcacgccgg tgtaggcgaa gaagaagccg atcgtcttgg
     1621 cggtgacgtt gaaccgcacg gcgagataca aggcgagcat cgacgtcacg ccctggaagg
     1681 cgcccatcgc aatggcgtag atccagatca gccgcgacgc gggctccgcc gaatgggtga
     1741 cgacgtgcac gatggcgtcg cgcgagcggg cgcgcggggc agggttcgcc ttcgcctccg
     1801 cggcctcctt catgtcgcgc gattcggtga ggaagcgcga ggcgaacgcc atgttgagca
     1861 cgcacagcgc ggcggcgaac aggccgggcg cactgcgccc ccactggctg gagatcgagc
     1921 cgagcacggg accgatggcg acgccggcgt tggtcgcggc ggagagccag cccagcgcct
     1981 tcgcgcggtc ctgcggctcg gtggcgtcgg cgacgtacgc ctggatgacg ctcacggtgc
     2041 ccccgcccgc gccctgcacg agccgcgaga tgaacagcag cgccagcgag tgcgcgaagc
     2101 cgaagatcac gtacgcgatg gcc
//
LOCUS       DASSYW010000707         2276 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1213958, whole genome shotgun sequence.
ACCESSION   DASSYW010000707 DASSYW010000000
VERSION     DASSYW010000707.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2276)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2276)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2276
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1213958"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..292
                     /locus_tag="VFN38_11265"
     CDS             <1..292
                     /locus_tag="VFN38_11265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012386.1"
                     /translation="LLLLERTALSRTLDPLVDAGYVEVTRGRDARTCEVSITRAGRAA
                     LTAALGPWTRAQAEVARRIGAAKLEGLYATLVELEALHPGAAERRATKDDVA"
     gene            289..1515
                     /locus_tag="VFN38_11270"
     CDS             289..1515
                     /locus_tag="VFN38_11270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012206885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HET9012387.1"
                     /translation="MSASPRADWRTPTAVLVCGGMILTLSLGLRHGFGLFLQPMTADL
                     HWGRETFAFALAVQNLVWGASQPFAGMFADKYGGGRVAGGGALLYLAGLALMAYPVAP
                     WLFVLSSGVLVGLGLSGVSFSVIQGIVGRRYPPEKRSMALGISAAAGSFGQFALLPLT
                     QWLITHVGWHGALLTLAAVGLLMIPLALGMVEKGAHHATHAFKQSAGQAMREALGHRG
                     YVLLTIGFFVCGFQLVFVGVHLPAYLADRGFPPHAAVIALALIGLFNIFGTYTTGWLG
                     GRMPKRWILSAIYLGRAAAIALFLWLPMSFATIYVFAMAFGFLWLSTVPPTNGIVAGV
                     FGTRYLAMLSGFTFFSHQIGSFLGAWLGGYLFDRTGSYDVVWWIAIALGVLAGLINLP
                     IDERQIRRAQPAESAA"
     gene            complement(1652..>2276)
                     /gene="ugpQ"
                     /locus_tag="VFN38_11275"
     CDS             complement(1652..>2276)
                     /gene="ugpQ"
                     /locus_tag="VFN38_11275"
                     /EC_number="3.1.4.46"
                     /inference="COORDINATES: protein motif:HMM:NF006989.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008081 - phosphoric diester hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HET9012388.1"
                     /translation="RMAEFDVKLSADGVAFLLHDDTLDRTTSGSGRADALPWRELSRL
                     DAGSWHSAPYAGEPIPTLQAVARWCRANGVALNIEIKPTPGRERETGAAVALDAVALW
                     KGSDVPPLLSSFSATALEAALEAAPALPRAWLTETLPADWRERCVALGCVALDAKHTL
                     LKADTIAAAHAAGLRVAAWTVNDAMRVAELASWGVDTIITDAVDAIT"
BASE COUNT          263 a          851 c          807 g          355 t
ORIGIN      
        1 cctgctcctg ctcgagcgca ccgcgctgtc gcgcacgctc gatccgctgg tggacgcggg
       61 ctacgtcgag gtgacgcgcg ggcgcgacgc gcgcacatgc gaggtgtcga tcacccgcgc
      121 aggccgcgcg gcgctgacgg ccgcgctggg accgtggacg cgggcgcagg ccgaggtcgc
      181 gcgcaggatc ggcgccgcga agctcgaggg gctgtacgcg acgctcgtcg agctcgaagc
      241 cctccacccc ggcgcggcgg agcgccgcgc cacgaaggac gacgtcgcat gagcgcctct
      301 ccccgcgccg actggcgcac cccgaccgcc gtcctcgtgt gcggcggcat gatcctcacg
      361 ctgtcgctcg ggctgcgcca cggcttcggc ctgttcctgc agccgatgac cgccgacctg
      421 cactggggcc gcgagacctt cgcgttcgcg ctcgcggtgc agaacctcgt ctggggcgcg
      481 tcgcagccgt tcgccggcat gttcgccgac aagtacggcg gcggtcgcgt cgccggcggc
      541 ggcgccctgc tctacctcgc cgggctcgcc ctgatggcct acccggtcgc accctggcta
      601 tttgtgctgt cgagcggggt gctggtcggg ctggggctct ccggcgtctc gttctcggtg
      661 atccagggca tcgtcgggcg gcgctacccg cccgagaagc gcagcatggc gctcggcatc
      721 tcggccgcgg ccggctcgtt cggccagttc gcgctgttgc cgctcacgca gtggctgatc
      781 acgcacgtcg gctggcacgg cgcgctcctg acgctggccg ccgtcgggct cctgatgatc
      841 ccgctcgcgc tcggcatggt cgagaagggc gcgcaccacg cgacgcacgc gttcaagcag
      901 tcggccggcc aggcgatgcg cgaggcgctc ggccatcgcg gctacgtgct cctgacgatc
      961 ggattcttcg tctgcggctt ccagctcgtc ttcgtcggcg tgcacctgcc cgcctacctc
     1021 gccgatcgcg gcttcccgcc gcacgccgcg gtgatcgccc tcgcgctgat cgggctgttc
     1081 aacatcttcg gcacctacac gaccggctgg ctcggcggga ggatgccgaa gcgctggatc
     1141 ctgtccgcga tctatctcgg ccgcgccgcg gcgatcgcgc tgttcctgtg gctgccgatg
     1201 tcgttcgcga cgatctacgt gttcgcgatg gcgttcgggt tcctgtggct gtcgacggtg
     1261 ccgccgacca acggcatcgt ggccggcgtg ttcggcacgc gctacctcgc gatgctgtcg
     1321 ggcttcacgt tcttcagcca ccagatcggc agcttcctcg gggcgtggct ggggggctac
     1381 ctgttcgacc gcaccggcag ctacgacgtc gtgtggtgga tcgcgatcgc gctgggcgtg
     1441 ctcgccggcc tgatcaatct gccgatcgac gagcggcaga tccggcgcgc gcagcccgcc
     1501 gaatccgccg cctaggcgtc aggggcggac gcgaaggctt cgcccgcgtc gcccgcaccc
     1561 tcacgcctcc gacggcctgc cctggaagca gcatcgggca acatcggggc cgagcccgtc
     1621 gaacgtcccg ggggcggtcc ccgggccttc gtcaggtaat cgcatccaca gcgtcggtga
     1681 tgatcgtgtc cacgccccac gacgccagct cggcgacgcg catcgcgtcg ttcacggtcc
     1741 atgccgcgac ccgcaggccc gccgcgtgcg cggcggcgat cgtgtcggcc ttcagcagcg
     1801 tgtgcttcgc gtcgagcgcg acgcagccca gcgcgacgca gcgctcgcgc cagtcggcgg
     1861 gcagcgtctc ggtcagccag gcgcgcggca gcgcgggcgc cgcctcgagt gccgcctcga
     1921 gcgcggtcgc cgagaacgac gacagcagcg gcggcacgtc gctgcccttc cacagcgcca
     1981 cggcgtcgag cgcgaccgcg gcgccggtct cgcgctcgcg cccgggcgtc ggcttgatct
     2041 cgatattgag cgcgacgccg ttggcgcggc accagcgcgc gacggcctgc agcgtcggta
     2101 tcggctcgcc cgcgtagggc gccgagtgcc agctccccgc gtccagccgc gagagctcgc
     2161 gccacggcag cgcgtcggcc cgcccgctgc cgctggtcgt gcgatcgagc gtgtcgtcgt
     2221 gcagcaggaa cgcgacgccg tcggcggaca gcttcacgtc gaactcggcc atccgg
//
LOCUS       DASSYW010000708         3489 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1292151, whole genome shotgun sequence.
ACCESSION   DASSYW010000708 DASSYW010000000
VERSION     DASSYW010000708.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3489)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3489)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3489
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1292151"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..361
                     /locus_tag="VFN38_11280"
     CDS             <1..361
                     /locus_tag="VFN38_11280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012389.1"
                     /translation="ELTNAVVTHWNAGYTATRARDAGARRTLRALNAAASAIFLVAPT
                     LNLMLESTWDRTESFDVASATRFDEHLTIMPGLRGAINLASGMQIVPGIGLPFVRSGG
                     TTERDLFLYFSVEHAFR"
     gene            complement(354..836)
                     /locus_tag="VFN38_11285"
     CDS             complement(354..836)
                     /locus_tag="VFN38_11285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012390.1"
                     /translation="MDDQSPSFAVVILAGRATPADRDRVAEMVQVARGAGAQAIVAAV
                     PRGWRAPPQSRVVHVPPGSSTISALRLGMAQLGNTAVRYALLWPLEAATSPHLPTLVD
                     AVRTERPVLAALEGDDVEHAPVMIARDAWLDLMTLGEQGIGAVADRRGLRRVPPDAPT
                     "
     gene            complement(890..1084)
                     /locus_tag="VFN38_11290"
     CDS             complement(890..1084)
                     /locus_tag="VFN38_11290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012391.1"
                     /translation="MHDSHAPVGNGRHIPFKQEGWGIALFVCLLAVGSALTAFYVHKT
                     TYKHPTDVRMQAVGDNRAEH"
     gene            1238..2236
                     /locus_tag="VFN38_11295"
     CDS             1238..2236
                     /locus_tag="VFN38_11295"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HET9012392.1"
                     /translation="MPAKTSVRTTTRPRTSSRTSLRTGALEIPRRPFGSTGEMVSALG
                     MGGFHLGLVGSEREAASLVHQAIDAGITFMDNAWEYHDGTSEARMGKALANGWRQRVF
                     LMSKVCTHGRDAKVAMRQLEDSLRRLKTDHLDLWQVHEVAYAGDPERHFMKGGVIEAL
                     DRAKRKGLVRFVGFTGHKDPALHLQMLSYGYPFDSCQMPLNCFDASFRSFEQQVIPEA
                     TRQGIAVIGMKSFGGGGEALRKRVVSAAEALHYAMSLPVAVTVSGIDSRKVLRQNVGV
                     ARGFRPMGPLELERLRAKYAPHAVDGRFELYKTTAKHEADVGRRQHGFPLQAELGG"
     gene            2326..>3489
                     /locus_tag="VFN38_11300"
     CDS             2326..>3489
                     /locus_tag="VFN38_11300"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HET9012393.1"
                     /translation="MQSPLIDQLAAALGPGFTIERELGGGGMSRVFVALEHALERRVA
                     VKVLPEHLAASVSVDRFKREILLSAGLQHPHIVGVLSAGEAGGLPFFVMPFVEGENLA
                     DCIARSGPLSVRRAVSILKDVARALAYAHERGVVHRDIKPHNILLAAGAATVTDFGVA
                     KAITSARRSGAHGGTLTSAGTSLGTPLYMAPEQAAADPDIDHRADIYALGITAYEMLT
                     GAAPFAGLAPRALLTARMSEDPPRLDMVRADVPSALSALVMRCLARDPADRPQSAEEL
                     LGALDDPAMVSGAHRAPVLRRRADRVPRDRRLAAAALVVVIALASAMVAQRRTGASLA
                     PAPASAPTPGAATAPSPATVVVLPLVSIGADSGNAYLADGITNELATALARVPG"
BASE COUNT          480 a         1274 c         1218 g          517 t
ORIGIN      
        1 ggagctgacg aacgccgtcg tcacgcactg gaatgccggc tacacggcga cgcgtgcgcg
       61 cgacgccggc gcgcgacgga cgctccgcgc gctcaatgcg gcggcgagcg ccatctttct
      121 cgtcgcgccg accttgaatc tgatgctcga gagcacgtgg gaccgcaccg agtcgttcga
      181 cgtcgccagc gcgacgcgct tcgacgagca cctcacgatc atgccgggcc tccgcggcgc
      241 gatcaacctg gcgtcgggga tgcagatcgt gccgggcatc ggtctgccgt tcgtccggag
      301 cggcggcacc accgagcgcg atctctttct ctacttcagc gtcgagcacg ccttcaggta
      361 ggcgcgtcgg gcggcacgcg ccgcagtccg cgcctgtccg cgaccgcgcc gatcccctgc
      421 tcgccgagcg tcatcaggtc cagccaggcg tcgcgggcga tcatcaccgg ggcgtgctca
      481 acgtcgtcgc cctccagcgc cgcgagcacc ggtcgctcgg tgcgcacggc atccacgagc
      541 gtcggcaggt gaggcgacgt ggccgcctcg aggggccaga gcagggcata tcggaccgcc
      601 gtgttgccaa gctgcgccat tcccaggcgc agggcgctga tcgtcgacga acccggcggt
      661 acgtgcacca cgcgcgactg cggcggcgcg cgccagccgc gcggcacggc cgcaacgatc
      721 gcctgtgccc ccgcgcctcg cgcgacctgc accatctccg caacgcggtc gcggtcggcc
      781 ggcgtggcac ggccggcgag gatcaccacg gcgaatgacg gcgactggtc gtccacgctg
      841 actccggcgc ggtcgcggtt cgcgtcgcgc agcggcgacg cggccgggtc tagtgctccg
      901 cccggttgtc gcccacggcc tgcatgcgca cgtcggtcgg atgcttgtac gtcgtcttgt
      961 ggacgtagaa cgccgtcaat gcgctgccca cggcgagcag gcagacgaag agcgcgatgc
     1021 cccagccttc ctgcttgaag gggatgtggc ggccgttgcc gacgggagcg tgcgaatcgt
     1081 gcatcagggt ctccattcag atcggccgcc gatggtgcac cggcggcccc gagctgcagg
     1141 tcggaaagct agcccgggcg ttcctgcggc gacagcggcc ccggttcgct ttctgcacgc
     1201 cctcgcgacg acccacaaag cgcttccgga ggagcccgtg cccgccaaga ccagtgtccg
     1261 caccaccacc cgcccacgca cgtcgtcgcg tacctccctg cgcaccggcg cgctggagat
     1321 tccacgccgc cctttcggca gcacgggcga gatggtctcg gcgctcggca tgggtggctt
     1381 tcacctcggg ttggtcggca gcgagcggga ggcggcgtcg ctcgtccacc aggcgatcga
     1441 cgccggcatc accttcatgg acaacgcgtg ggagtatcac gacggcacca gcgaagcgcg
     1501 catgggcaag gcgctggcga acggctggcg gcagcgtgtc ttcctgatgt cgaaggtgtg
     1561 cacccacggt cgtgatgcga aggtcgccat gcgacagctc gaggactcgc tccgtcgcct
     1621 caagacggac cacctggatc tctggcaggt gcatgaggtg gcgtatgccg gcgatcccga
     1681 gcggcacttc atgaagggcg gcgtgatcga ggcgctcgac cgcgcgaagc ggaaggggct
     1741 cgtgcgcttc gtcggcttca ccgggcacaa ggaccccgcg ctgcatctcc agatgctgtc
     1801 gtacggctat ccgttcgaca gttgccagat gcccctcaac tgcttcgacg cctcgtttcg
     1861 gagcttcgag cagcaggtga tccccgaagc cactcgccag ggcatcgccg tgatcgggat
     1921 gaagagcttc ggcggcggtg gcgaggcgct caggaagcgc gtggtgtcgg ccgccgaggc
     1981 gctgcactac gccatgagcc tgccggtcgc ggtgacggtg tccggcatcg actcgcgcaa
     2041 ggtgctgcgg cagaacgtcg gcgtcgcgcg cggcttccgt cccatgggcc cactcgagct
     2101 ggaacgcctg cgcgcgaaat acgcgccgca cgcggtggac gggcggttcg agctgtacaa
     2161 gacgaccgcg aaacacgagg ccgacgtcgg gcgccgccag cacggcttcc ccttgcaggc
     2221 cgagctcggg gggtagatcg cgatccggat ggcgcaccgg ctccgccggg cgcatccttt
     2281 cggggcatcg gactgtcaca ccatgaggcg tcctccgacc ccaccgtgca atcacccctg
     2341 atcgatcagc tggccgcggc cctcggcccc ggcttcacca tcgagcgcga gctcggcggg
     2401 ggcggcatgt cgcgcgtgtt cgtggcgctc gagcatgccc tcgagcggcg cgtggcggtg
     2461 aaggtgctcc ccgagcacct cgccgcgtcg gtgtccgtcg accgtttcaa gcgcgagatc
     2521 ctcctgtcgg cggggctgca gcatccgcac atcgtcggcg tgctgagcgc gggggaggcg
     2581 ggtgggctcc ccttcttcgt catgcccttc gtggagggcg agaacctcgc cgactgcatc
     2641 gcgcgctccg gccccctgtc cgtccggcgc gccgtctcga tcctgaagga cgtcgcgcgt
     2701 gcgctcgcgt atgcgcacga gcgcggcgtg gtccaccgcg acatcaagcc gcacaacatc
     2761 ctgctcgccg cgggcgccgc caccgtcacg gacttcggcg tcgcgaaggc catcacgtcg
     2821 gcacgtcgca gcggggcgca tggcggcacg ctcaccagcg cggggacgtc cctgggcacg
     2881 ccgctgtaca tggcgcccga gcaggcggcg gccgatcccg acatcgatca tcgcgccgac
     2941 atctacgcgc tcggcatcac ggcgtacgag atgctcaccg gcgccgcgcc cttcgccggt
     3001 ctggcgccgc gcgccctgct cacggcgcga atgtccgagg atccgccgcg gctggacatg
     3061 gtgcgcgcgg acgtgccctc ggccctctcc gccctggtga tgcgctgcct cgcgcgcgat
     3121 cccgccgatc gaccgcagag tgcggaggag ctgctcggcg cgctcgacga tccggcgatg
     3181 gtgagcgggg cgcatcgcgc gccggtgctg cgccgccgcg ccgatcgtgt gccgcgcgac
     3241 cgccggctgg ccgcggcggc gctcgtcgtc gtgatcgcgc tcgccagcgc catggtggca
     3301 cagcgccgca cgggcgcgtc gctcgccccc gcccccgcct ctgctccaac cccgggcgcc
     3361 gccaccgccc cgtcgccggc aaccgtcgtc gtgctgcccc tcgtgagcat cggggccgac
     3421 tcgggcaatg cgtaccttgc cgacgggatc accaacgagc tggccaccgc gctcgctcgt
     3481 gtgccgggg
//
LOCUS       DASSYW010000709         3122 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_960451, whole genome shotgun sequence.
ACCESSION   DASSYW010000709 DASSYW010000000
VERSION     DASSYW010000709.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3122)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3122)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3122
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_960451"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..285)
                     /locus_tag="VFN38_11305"
     CDS             complement(<1..285)
                     /locus_tag="VFN38_11305"
                     /inference="COORDINATES: protein motif:HMM:NF014714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012394.1"
                     /translation="MREILFVAGEVSGDLHAAAVARALRAAGAPFRLIGVGGDAMREA
                     GVALLANTASRAVMGFVEPLKHVPRFLRLRRELRRRIRGGNVALVVLVDSA"
     gene            complement(278..1273)
                     /locus_tag="VFN38_11310"
     CDS             complement(278..1273)
                     /locus_tag="VFN38_11310"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HET9012395.1"
                     /translation="MRTGVIGAGGLGHHHIRILRDLQGPDFAGFYESRPDRAAAVAKE
                     LGVRAFESLDALLDAVDAVTIVVPTPAHFDVAKRVLSRGIHALIEKPIAATLAEADEM
                     LSLARTHGALIQTGHVERFNRAIRAALPYVEAPRFIQSDRLAPFNPRGADVAVVLDLM
                     IHDIDLVLTLVGGHAASVHAVGVPVLTPFVDIANARLTFDSGAVANITASRVSRERMR
                     KLRIFQQSGYLSLDLGAGNGEFYRLRGDLDMTALATAPLALEQFVERIPLEADEGDAL
                     RLEFESFLAGVRGESPIPVTGEAGREALGVALQIVADIERSLPSLAGGAALPARA"
     gene            complement(1282..2058)
                     /gene="lpxA"
                     /locus_tag="VFN38_11315"
     CDS             complement(1282..2058)
                     /gene="lpxA"
                     /locus_tag="VFN38_11315"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008780 -
                     acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine
                     O-acyltransferase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HET9012396.1"
                     /translation="MSPRIHPTALVSPDARIAEDVEIGAFAMIGEGCTIGAGSVIAPR
                     ATLERNVILGPNVKVGIGTVLGGDPQDLKFKGEHTTVEIGDGTTIREYTTINRGTTQS
                     YKTTVGKHCFIMSYVHLAHDCHVGDGVILVNSVQLAGHVTVGDKAIIAGASAAHQFVK
                     IGQFAFVGGCSRISQDVPPYVKAVGNPIKLYGLNSVGLQRNNFPEDVVRELKRAYRIF
                     FRSELNVSQAKERAAAELKPMPEVLELLRFVEDSGRGVVV"
     gene            complement(2055..>3122)
                     /gene="lpxC"
                     /locus_tag="VFN38_11320"
     CDS             complement(2055..>3122)
                     /gene="lpxC"
                     /locus_tag="VFN38_11320"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: protein motif:HMM:TIGR00325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008759 - UDP-3-O-[3-hydroxymyristoyl]
                     N-acetylglucosamine deacetylase activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HET9012397.1"
                     /translation="EPNAVHTVEHVLAAVHALELDDLVISMDGPEPPIMDGSAGPFFA
                     ALREAGVAEQPGCVRTGRLTEPVRLVDGESVYEAVPADELTLDVTIDFPHALIGRQRY
                     SAAVTAEGFGRELAWARTFGFVREVEPLRAKGLIKGASTQNAVVLDETGVVENALRSP
                     DEFVRHKMMDCVGDLALAGMRLKARIAAHKPSHRGTVLFVRALQAAMKQETQVLGIEE
                     IMKVLPHRYPFLLVDRVVELEPKKRVVGIKNVTINEPFFQGHFPGHPIMPGVLIVEAM
                     AQVGGMLLLGAIPDPESKVVYFTSLNNVKWRRPVKPGDQLRFELDLLQVRGPMCKMQG
                     VAKVDGEVVCEAEMSAMVRDR"
BASE COUNT          474 a         1174 c         1012 g          462 t
ORIGIN      
        1 ggcggaatcc acgagcacga ccagcgccac gttgccgccc cggatgcggc gcctgagctc
       61 gcgccgcagg cggaggaagc gcggcacgtg cttgagcggc tcgacgaatc ccatcaccgc
      121 gcgcgacgcc gtgttcgcca ggagcgccac gccggcctcg cgcatcgcgt cgccgccgac
      181 gccgatcagc cggaacggcg cgccggccgc gcgcaacgcg cgcgccaccg ccgccgcgtg
      241 caggtcgccg gacacctcgc cggcgacgaa caggatctca cgcacgtgcg ggcagcgcgg
      301 cgccgccggc gagcgagggg agcgaccgct cgatgtcggc cacgatctgg agcgccacgc
      361 cgagcgcttc ccgacccgcc tcgcccgtca ccgggatcgg agactcgccg cgcacgcccg
      421 ccaggaagct ctcgaactcc aggcgcagcg cgtccccctc gtcggcctcc agcgggattc
      481 gctccacgaa ctgctcgagg gcgagcggcg cggtcgccag cgccgtcatg tccaggtcgc
      541 cccgcaggcg atagaactcg ccgttgccgg cgccgaggtc gagcgagaga tatccgctct
      601 gctggaagat ccgcagcttg cgcatccgtt cgcgcgacac gcggctcgcg gtgatgttcg
      661 ccaccgcgcc ggagtcgaag gtgaggcgcg cgttggcgat gtccacgaac ggcgtcagca
      721 cgggcacgcc cacggcgtgc accgacgcgg catgcccgcc caccagagtg agcaccaggt
      781 cgatgtcgtg gatcatgaga tccagcacga cggccacgtc ggcgccgcgc ggattgaacg
      841 gcgccagccg atcgctctgg atgaaccgcg gcgcttcgac gtacggcagc gcggcgcgga
      901 tcgcgcgatt gaaccgctcc acgtgcccgg tctggatcag cgcgccatgc gtccgcgcga
      961 gcgacagcat ctcgtccgcc tcggccagcg tggcggcgat cggcttctcg atcagcgcgt
     1021 gaatgccgcg cgacagcacc cgcttcgcca cgtcgaaatg cgccggcgtg ggcacgacga
     1081 tcgtcacggc atccacggcg tccagcagcg cgtccagcga ctcgaacgcg cgcacgccga
     1141 gctccttcgc caccgccgcg gcgcggtcgg ggcgcgactc gtagaaaccg gcgaagtccg
     1201 gaccctgcag gtcgcgcagg atgcggatgt ggtgatgccc caggccgccg gctccgatca
     1261 cgccggtccg cacgcgccgg ctcagacgac cactccgcgg ccgctgtcct cgacgaagcg
     1321 cagcagctcc agcacctccg gcatcggctt gagctccgcg gccgcccgct ccttcgcctg
     1381 cgacacgttc agctccgagc ggaagaagat gcggtaggcc cgcttgagct cccgcaccac
     1441 gtcctcgggg aagttgttcc gctggagtcc cacgctgttc agcccgtaca gcttgatcgg
     1501 gttgcccacc gccttcacgt agggcggcac gtcctgcgag atgcgcgagc acccgcccac
     1561 gaaggcgaac tggccgatct tgacgaactg gtgcgccgcg ctcgcgccgg cgatgatcgc
     1621 cttgtccccc accgtcacgt ggccggcgag ctgcacgctg ttgacgagga tcacgccgtc
     1681 gcccacgtgg cagtcgtgcg ccaggtgcac gtaggacatg atgaagcagt gcttccccac
     1741 cgtcgtcttg tacgactggg tggtgccacg gttgatggtc gtgtactcgc ggatcgtcgt
     1801 gccgtcgccg atctcgaccg tcgtgtgctc gcccttgaac ttgaggtcct gcgggtcgcc
     1861 gcccagcacg gtcccgatgc cgaccttcac gttcggtccg agaatcacgt tgcgctcgag
     1921 cgtggcgcgc ggcgcgatca ccgagccggc gccgatggtg cagccctccc cgatcatcgc
     1981 gaacgcgccg atctcgacgt cctcggcgat gcgcgcgtcc gggctgacga gcgccgtggg
     2041 atggatgcgc gggctcaccg gtcgcgcacc atcgcgctca tctccgcctc gcacacgacc
     2101 tcgccatcga ccttcgccac gccctgcatc ttgcacatcg gcccgcgcac ctggaggagg
     2161 tccagctcga accgcagctg gtcgcccggc ttcaccggcc gtcgccactt cacgttgttg
     2221 agcgaggtga agtacacgac cttgctctcg ggatcgggga tcgcgccgag caggagcatc
     2281 ccgcccacct gcgccatcgc ctcgacgatc aggacgccgg gcatgatcgg atgccccggg
     2341 aaatgcccct ggaagaacgg ctcgttgatc gtgacgttct tgatgccgac cacgcgcttc
     2401 ttcggctcca gctcgaccac gcggtcgacg agcaggaacg ggtagcggtg cggcagcacc
     2461 ttcatgattt cctcgatacc gagcacctgg gtctcctgct tcatcgccgc ctgcaacgcg
     2521 cgcacgaaca gcacggtgcc gcggtgactg ggtttgtgcg ccgcgatgcg agccttcagc
     2581 cgcattcccg ccagcgcgag atcacctaca cagtccatca tcttatgccg cacgaactcg
     2641 tctggcgagc ggagcgcgtt ctccacgacc ccggtctcgt ccagcaccac ggcgttctgc
     2701 gtcgacgcgc ccttgatcag ccccttcgcc cgcagcggtt ccacttcgcg gacgaagccg
     2761 aacgtgcgcg cccacgccag ctcacgaccg aacccctcgg cggtcacggc cgcgctgtag
     2821 cgctgccgcc cgatgagggc atgcggaaaa tcgatcgtga cgtcgagcgt cagctcgtcc
     2881 gccggcaccg cctcgtacac cgactccccg tccaccagcc gcaccggctc cgtcagccgt
     2941 cccgtgcgca cacacccggg ctgctcggcc acgcctgcct cccgcagcgc ggcgaagaag
     3001 gggccggcgc tgccgtccat tatcggcggc tccggtccgt ccattgagat gacgaggtca
     3061 tcgagctcga gcgcgtgcac ggcggccagc acgtgctcca ccgtgtgcac cgcgttgggc
     3121 tc
//
LOCUS       DASSYW010000710         2337 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_563047, whole genome shotgun sequence.
ACCESSION   DASSYW010000710 DASSYW010000000
VERSION     DASSYW010000710.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2337)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2337)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2337
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_563047"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..419
                     /locus_tag="VFN38_11325"
     CDS             <1..419
                     /locus_tag="VFN38_11325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012398.1"
                     /translation="LVKSSVPFGSASTPSSWPLPLRITWDGVGRRWIVLSFDPFVGEV
                     AAMPEDMASRQVVHSGKGQLDGVEALPNGTLLYTSWADSSVHALTGGRDRQIVREVPV
                     PADIGIDTRRMHLAIPLSMLGRVQLWDIGAIARAAP"
     gene            complement(424..1614)
                     /locus_tag="VFN38_11330"
     CDS             complement(424..1614)
                     /locus_tag="VFN38_11330"
                     /inference="COORDINATES: protein motif:HMM:NF028007.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051219 - phosphoprotein binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HET9012399.1"
                     /translation="MPLLRSGTDRAVLRVGNNTLGGRGADALPVAALAWQPPVATITV
                     PAHGPVLIRRLTASVVVRLDEQPLGVAPAELRHGTHIDIAGCRLTFEADVPGAEPVAP
                     GGPTPSASSAAIGASPALPPNLSPARLVVLKTGATFSLPGRKTVIGRDTECDIVIPDV
                     GVSRRHASITPVPGGYLLTDESSNGTLVNGSRVAGTRILDHGDILRLHDEEIRFELEG
                     HAGGEPTPEQASRAATAILDMSSLRSVMASEAARAASRKSPTASLEIVRGAFAGASFH
                     IERPVCSIGRGEQSDVRLRDDSVSTAHATLLRKGDTWYVVDLRSVNGTFVDGYRVAGE
                     RELPTGATLRVGAVEMIFRSFIAGVEAPPVVKPSTGIIGWVKRLFRAPPPHGESHSGS
                     SSHS"
     gene            complement(1834..>2337)
                     /locus_tag="VFN38_11335"
     CDS             complement(1834..>2337)
                     /locus_tag="VFN38_11335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012400.1"
                     /translation="VLAAQLANDEAMINDLNATIQHQSATIAALSTRVDSLNGVTKEM
                     GATIASLEAQHNKAFYVIGNEDELLKKGIIVHEGGANLLIAHPGRTIQMSRTADASAF
                     TAVDKRQANVISMPDENHRWRIVSRQSLDYAKVDERDNDTFKGNLKITEPSKFWGPSR
                     FLIVVEQ"
BASE COUNT          330 a          782 c          861 g          364 t
ORIGIN      
        1 agctcgtgaa gagcagcgtg ccgttcggga gcgcctccac gccgtcgagc tggcccttgc
       61 ccctgcggat cacctgggac ggcgtgggcc gccgatggat cgtgctctcg ttcgatccgt
      121 tcgtcggcga ggtggcggcg atgccggagg acatggcgtc gcgccaggtg gtccacagcg
      181 gcaagggtca gctcgacggc gtggaggcgc tccccaatgg caccctgctc tacacgagct
      241 gggccgactc cagcgtccat gcgctgacgg gcgggcgcga tcgacagatc gtgcgcgagg
      301 ttccggtgcc cgcggacatc gggatcgaca cccggcggat gcacctcgcg atcccgctgt
      361 cgatgctcgg gcgcgtgcag ctctgggaca tcggcgccat cgcgcgcgcc gcgccctgac
      421 cgatcagctg tggctcgagg agcccgagtg actctcgccg tgcggcggcg gcgcgcggaa
      481 gagccgcttc acccagccga tgatccccgt gctcggcttc acgaccggcg gcgcctccac
      541 gccggcgatg aacgagcgga agatcatctc caccgccccg acgcgaagcg tcgcgcccgt
      601 ggggagctcg cgctcgcccg ccacgcgata gccgtcgacg aaggtcccgt tgaccgaccg
      661 gaggtcgacg acgtaccagg tatcgccctt ccgcagcagc gtggcgtgcg cggtggagac
      721 gctgtcgtcg cggaggcgga cgtcgctctg ctcgccgcga ccgatggagc acaccggacg
      781 ctcgatgtgg aacgacgcgc cggcgaaggc gccgcggacg atctcgaggc tcgccgtggg
      841 cgatttgcgg ctggccgcac gcgcggcctc gctggccatc acgctccgca ggctcgacat
      901 gtcgaggatg gccgtcgcgg cgcgactcgc ctgttccggc gtcggctcgc cgcccgcatg
      961 cccttccagc tcgaagcgga tctcctcgtc gtgcagccga aggatgtcgc cgtgatcgag
     1021 gatgcgcgtg cccgccacgc gcgacccgtt cacgagggtg ccgttggagc tctcgtcggt
     1081 gagcaggtag ccgcccggca ccggcgtgat cgacgcatgg cgtcgcgaca cgccgacgtc
     1141 ggggatgacg atgtcgcact cggtgtcgcg cccgatgacc gtcttgcgcc caggcaggga
     1201 gaaggtcgcg cccgtcttga gcacgacgag ccgcgccggc gacaggttgg gcggaagcgc
     1261 gggcgacgcc ccgatggccg cggacgacgc cgacggagtc gggccgccgg gggcaaccgg
     1321 ctcggcgccc ggcacgtcgg cctcgaaggt caggcggcag ccggcgatgt cgatgtgcgt
     1381 gccgtgccgc agctccgcgg gcgcgacacc gagcggctgc tcgtcgagcc gcacgacgac
     1441 ggatgccgtg aggcgccgga tgagcaccgg cccgtgcgcg gggacggtga tggtggcgac
     1501 cggcggctgc cacgccagcg cggcgaccgg gagcgcatcg gcgccacgcc caccgagggt
     1561 gttgttccca accctcagca cggcgcggtc ggttcccgat ctcagaagcg gcatggcggg
     1621 cgtgactctc tcgcgttgtg gctacgatga agaataaaca gtcgcgcgga atcggagaat
     1681 ttgtgaggct gcggcgagcg gggcagtgac gtgactcacc ggggtccggc gggctgcgcc
     1741 ttcacatctc aaggacggct ggcgggctga acgcgcaacg gggcggcgat tcacgccgcc
     1801 ccgttgggca ctcggcatcg cgacccgagg cgactactgc tcgacgacga tgaggaagcg
     1861 cgaggggccc cagaacttcg acggctcggt gatcttcagg ttgcccttga aggtgtcgtt
     1921 gtcgcgctcg tccaccttcg cgtagtcgag gctctggcgc gacacgatcc gccaccggtg
     1981 gttctcgtcg ggcatggaga tcacgttggc ctggcgcttg tccacggccg tgaacgcgct
     2041 ggcgtccgcg gtgcgcgaca tctggatcgt gcggcccgga tgggcgatga ggaggttggc
     2101 gccaccttcg tgcacgatga tgcccttctt gaggagctcg tcctcgttgc cgatcacgta
     2161 gaaggccttg ttgtgctggg cctcgagcga ggcgatcgtg gcgcccatct ccttcgtcac
     2221 gccattgagg ctgtcgacgc gggtggagag cgcggcgatc gtcgccgact ggtgctggat
     2281 cgtggcgttg agatcgttga tcatcgcttc gtcgttcgcc agctgcgccg cgaggac
//
LOCUS       DASSYW010000711         2718 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_135433, whole genome shotgun sequence.
ACCESSION   DASSYW010000711 DASSYW010000000
VERSION     DASSYW010000711.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2718)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2718)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2718
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_135433"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..479
                     /locus_tag="VFN38_11340"
     CDS             <1..479
                     /locus_tag="VFN38_11340"
                     /inference="COORDINATES: protein motif:HMM:NF014027.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008612 - peptidyl-lysine modification to
                     peptidyl-hypusine [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="deoxyhypusine synthase family protein"
                     /protein_id="HET9012401.1"
                     /translation="PNADVNETASIVLGAKRRGGKSAIMICGGGSPKNFALQTEPQIQ
                     EVLGIDEKGHDFFLQITDARPDTGGLSGATPAEAVSWGKIDPDRLPDAVVCYLDSTVA
                     LPLLTAYAHARHEPRKLKRLLDKRAHNMKVLRDEFAKAGGAPSEPSDTDAKLPMHR"
     gene            600..1103
                     /locus_tag="VFN38_11345"
     CDS             600..1103
                     /locus_tag="VFN38_11345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012402.1"
                     /translation="MPIAELLLPEYDSEIAITRRVLERVPDDRGEWKPHEKAFKMAHL
                     AQLVAMLPEWVGKTLEQTELDIAPKDRPRGAGYTVETTATLLALFDRNASAGRAALAR
                     AKDEDFQVPWTLKAGGTPVLTQPRYMILRQMVLNHLVHHRAQLGIYLRLTDQKVPQMY
                     GPTADER"
     gene            1309..1866
                     /locus_tag="VFN38_11350"
     CDS             1309..1866
                     /locus_tag="VFN38_11350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012403.1"
                     /translation="MARLSLLTPLLYVTVLAGCGADSSHPAGLRPSTASSNVAAADGE
                     GSGPSVTGHAENTFVGGQLLRNVSFSARQLPDGSVSGRFHVTLQGPGRFTGYPDEGTQ
                     PITFEVTCLDVEGNRAWIGGRIVAPKTDPYLGLGDVWYVVDGGDSAPDRVGVAIGYNP
                     ESCHNRPAIYASPSERGELTVRDAQ"
     gene            complement(1955..>2718)
                     /locus_tag="VFN38_11355"
     CDS             complement(1955..>2718)
                     /locus_tag="VFN38_11355"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HET9012404.1"
                     /translation="RLSTWRGRLAGYDVSAYLLHGVLVDTGFAHAGGELLAALERLGP
                     RAAIVTHWHEDHAGNVEALARRDVPIRMHATCEATLRSRPSIGAYRHFVWGRPPRLVS
                     ARRDVDVSPLEVLSLPGHTADHLAVWDAERRILVSGDLFLGVKVRVAHRHERPRALLA
                     SLRKAAALEPRLLLDAHRGPVTDPVDALRAKAAWLEETIERVGERAARGDRPRAIARR
                     VLGPESAIGYVSAGEYSKIAFVRAVLDEPPVDALP"
BASE COUNT          416 a         1025 c          921 g          356 t
ORIGIN      
        1 atcccaacgc cgacgtgaac gagaccgcgt cgatcgtgct gggcgccaag cgccgcggcg
       61 gcaagagcgc catcatgatc tgcggcggcg gcagcccgaa gaacttcgcg ctccagaccg
      121 agccgcagat ccaggaggtg ctcggcatcg acgagaaggg gcacgacttc tttctccaga
      181 tcacggatgc gcgtcccgac accggcggcc tctccggcgc cacgccggcc gaggcggtga
      241 gctggggcaa gatcgacccc gaccgactgc ccgacgcggt ggtctgctac ctggactcca
      301 ccgtcgcgct cccgctgctc acggcgtatg cgcatgcgcg gcacgagccg cgcaagctga
      361 agcggctgct cgacaagcgg gcgcacaaca tgaaggtgct gcgcgacgag ttcgcgaagg
      421 cgggcggcgc gccgtcggag ccgagcgaca ccgacgcgaa gctgccgatg caccgctgaa
      481 tcggacaggt cgggaaaggg acagcggatc cacgttcacc gttcaccgtt caccgttcac
      541 cgttcaccgt tcaccgttca ccgttcaccg ttcaccgttc accgttcacg gtgccgccga
      601 tgcccatcgc cgagctgctg ctgcccgagt acgacagcga gatcgccatc acccgccgcg
      661 tgctcgagcg ggtgcccgat gaccggggcg agtggaagcc gcacgagaag gcgttcaaga
      721 tggcgcacct cgcgcagctc gtcgccatgc tccccgagtg ggtggggaag acgctcgagc
      781 agacggagct cgacatcgcg ccgaaggaca ggcccagggg agccggctac acggtggaga
      841 ccaccgccac cctgctggcg ctgttcgaca ggaatgcctc tgcgggccgc gcggcgctcg
      901 ccagggcgaa ggacgaggac ttccaggtcc cctggaccct gaaggccggc gggaccccgg
      961 tcctcaccca gccgcgctac atgatcctgc ggcagatggt gctcaaccat ctcgtgcacc
     1021 accgggccca gctcgggatc taccttcgcc tcaccgacca gaaggtgccg cagatgtacg
     1081 gccccacggc ggacgagcgg taggagagga gggagggacg ggcccgtggc gcccgccccg
     1141 ggggggcgcg cctgggcgga cgccggccaa accgcgcctc gcggggccga attgacatcg
     1201 ggtggcagag tgggttgacc cagcgctccc agattgggcg ggaagacgac ggcgccctcg
     1261 atcgaggtgc ggccgagtcc ccgaccttcc ccctcctgga gcttccgcat ggcccgtctg
     1321 tccctcctca cccccctgct gtacgtcacc gttctcgccg gctgcggcgc cgacagctcc
     1381 catcccgccg gccttcgtcc ctccaccgcg tcgtcgaacg tcgccgccgc cgacggcgaa
     1441 ggctcgggac cgagcgtcac cggccacgcc gagaacacct ttgtcggcgg gcagctgctc
     1501 cggaacgtca gcttcagcgc tcgccagctg cccgatggca gcgtgtccgg ccgctttcac
     1561 gtgaccctgc agggaccggg tcgtttcacc ggatacccgg acgagggaac gcagccgatc
     1621 accttcgagg tcacctgcct cgacgtggag ggcaaccgcg cctggatcgg cggacggatc
     1681 gtggccccga agaccgatcc gtacctcggc ctgggcgacg tctggtacgt cgtcgacggc
     1741 ggcgactcgg cgcccgatcg ggtgggggtg gccatcggct acaaccccga gtcgtgccac
     1801 aaccggccgg ccatctacgc ctcgccgtcc gagcgcggcg agctgaccgt tcgcgacgct
     1861 cagtgatcca ccggtccgtc gcggcgggtc atcgaccccg acgcggcggg ccgttccccc
     1921 tccccgtgcg cggaggggga gaagcgcgcg cacctcacgg gagcgcatcc accgggggct
     1981 cgtcgagcac cgcccgcacg aaggcgatct tcgagtattc tcccgcactc acgtagccga
     2041 tcgccgattc gggccccagc acgcgccgcg cgatggcccg cgggcggtcg ccgcgcgcgg
     2101 cccgctcgcc gacccgctcg atcgtctcct cgagccacgc cgccttcgcc cgcagtgcgt
     2161 ccacgggatc cgtcaccggc ccccggtgcg cgtccaggag cagcctgggc tccagcgccg
     2221 ccgccttccg caggctcgcc agcagtgcgc ggggacgctc gtgccgatgc gcgacgcgca
     2281 ccttcacccc caggaacagg tcgcccgaga cgaggatgcg ccgctccgcg tcccacaccg
     2341 cgaggtggtc cgcggtgtgt ccgggcagcg acagcacctc cagcggcgac acgtcgacgt
     2401 cgcgccgcgc cgacacgagg cgcggcggac gtccccacac gaagtgccga taggcgccga
     2461 tggaaggtcg cgagcgcagc gtcgcctcgc aggtggcgtg catgcggatc ggcacgtcgc
     2521 gccgggccag cgcttccacg ttgcccgcgt ggtcctcgtg ccagtgcgtc acgatcgccg
     2581 cgcgcggccc cagccgctcg agcgccgcga gcagctcgcc accggcgtgg gcgaagccgg
     2641 tgtccaccag cacgccgtgc agcaggtacg cgctcacgtc gtagcccgcc agccggcccc
     2701 gccacgtgct cagtcgca
//
LOCUS       DASSYW010000712         2298 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_444794, whole genome shotgun sequence.
ACCESSION   DASSYW010000712 DASSYW010000000
VERSION     DASSYW010000712.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2298)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2298)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2298
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_444794"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            21..>2298
                     /locus_tag="VFN38_11360"
     CDS             21..>2298
                     /locus_tag="VFN38_11360"
                     /inference="COORDINATES: protein motif:HMM:NF014615.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homocysteine S-methyltransferase family protein"
                     /protein_id="HET9012405.1"
                     /translation="MSSRSEPLSASTHPYLRALADRVLVYDGAMGTNIQRHNPTPEDF
                     GGKALEGCNDNLVLTRPDIIQSIHESFLAVGCDVVETCTFQSTPHRLKEWGLYEKARE
                     LNVQAAKLARAACAKYATPDQPRFVAGSIGPTGMLPSSSDPALSDITFEALAETYYLQ
                     ATYLVEGGVDVLLVETAQDILEVKAALTGFERLFTELGYRVPVQAQITLDTSGRMLLG
                     TDIASALTTLQAMRVDVVGLNCSTGPEHMREPVRFLTDHASLPISVIPNAGLPLNTGT
                     GEAIYPLEPLPMAGMLREFVEEFGVRIVGGCCGTPPEHLASIVTAVRAAQPAPLAPHA
                     REALVSSAMRATALRQEPAPLIVGERVNSQGSRKVKRLLLADDYEGILEVAREQQDSG
                     AHVLDVCVALTERADEAEQMAKLVKLISMSVETPIMVDSTEAPVIEAALQHIPGRAII
                     NSINMENGRKRIDSVVPIAKRHGAALVALTIDLAGMAKTRERKLEVARAIYDIVVGEY
                     GMKAEDLIYDALTFTLATGDPEWIDSAHETIEGIRLIKRELPGVFTILGVSNVSFGLD
                     AAARYVLNSVFLHHCVEAGLDAAIVNPAHITPYAEISAEQRALADDLVFNRRPDALQR
                     YIDGFATSAQKAAREEKEDPTAGMPPEAKVHWMVLHRKKEGIEDALDAAGVRDNPVRV
                     LNEVLLPAMKEVGDKFGAGELILPFVLQSAEAMKKAVKHLEQFLEKAEGYTKGRVVLA
                     TVYGDVHDIGKSLVNTILS"
BASE COUNT          383 a          790 c          792 g          333 t
ORIGIN      
        1 tgggctcctt ttttttgtcg gtgtcgagca ggtccgagcc gctttccgcg tccacccatc
       61 cctaccttcg cgctctcgcc gaccgcgtgc tcgtgtacga cggcgcgatg ggcacgaaca
      121 tccagcgcca caatccgacc cccgaggact tcggcggcaa ggcgctcgag gggtgcaacg
      181 acaacctcgt cctcacccgc cccgacatca tccagtccat ccacgagtcc ttcctcgccg
      241 tgggctgcga cgtcgtggag acctgcacct tccagagcac cccgcatcgg ctcaaggagt
      301 gggggctgta cgagaaggcg cgggagctta acgtgcaggc ggcgaagctg gcgcgagccg
      361 cctgtgccaa gtacgccacg ccggaccagc cgcgcttcgt cgccggctcc atcgggccca
      421 cggggatgct gccgtcgagc agcgatcccg cgctctccga catcaccttc gaggcactcg
      481 ccgagaccta ttacctccag gcgacgtacc tcgtggaggg gggcgtggac gtcctgctgg
      541 tggagacggc gcaggacatc ctggaggtga aggcggcgct caccggattc gagcggctgt
      601 tcaccgagct cggctaccgc gtgccggtgc aggcgcagat cacgctcgac acgagcggcc
      661 gcatgctgct gggcaccgac atcgcgagcg cgctcaccac cctccaggcg atgcgcgtgg
      721 acgtggtggg gctcaactgc tccaccggcc ccgagcacat gcgcgagccg gtgcggttcc
      781 tcaccgacca cgcctcgctg ccgatctcgg tgatcccgaa cgccgggctg ccgctcaaca
      841 ccggaacggg cgaggcgatc tacccgctgg agccgctgcc gatggcgggg atgctgcgcg
      901 agttcgtgga ggagttcggc gtgcgcatcg tgggcggatg ctgcggcacg ccgcccgaac
      961 atctggcgag catcgtgacg gcggtgcgcg ccgcgcagcc cgccccgctc gcgccgcacg
     1021 cccgcgaggc gctggtgtcg tcggccatgc gcgccacggc gctgcggcag gagccggcgc
     1081 cgctcatcgt cggcgagcgc gtgaactcgc agggctcgcg caaggtgaag cgcctcctcc
     1141 tcgccgacga ctacgagggg atcctcgagg tcgcgcgcga gcagcaggac tccggcgcgc
     1201 acgtgctgga cgtgtgcgtg gcgctcaccg agcgcgccga cgaagccgag cagatggcga
     1261 agctcgtcaa gctcatctcg atgagcgtcg agacgccgat catggtggat tccaccgagg
     1321 caccggtcat cgaggcggcg ctccagcaca tccccgggcg cgccatcatc aactccatca
     1381 acatggagaa tggccgcaag cgcatcgact ccgtggtgcc gatcgccaag cggcacggcg
     1441 cggcgctcgt ggcgctgacg atcgacctgg ccgggatggc caagacgcgc gagcggaagc
     1501 tcgaggtcgc ccgcgcgatc tacgacatcg tcgtgggcga gtacgggatg aaggccgagg
     1561 acctgatcta cgacgcgctc acgttcaccc tcgccaccgg cgacccggag tggatcgaca
     1621 gcgcgcacga gacgatcgag gggattcgcc tcatcaagcg cgagctgccg ggggtgttca
     1681 ccatcctcgg cgtgtccaac gtgagcttcg ggctcgacgc ggcggcgcgc tacgtcctca
     1741 actccgtgtt cctgcaccac tgcgtggagg cggggctcga cgcggccatc gtcaatccgg
     1801 cccacatcac cccttacgcc gagatcagcg ccgagcagcg cgcgctggcc gacgacctcg
     1861 tgttcaaccg ccgccccgat gcgctgcagc ggtacatcga cggcttcgcg acgagcgcgc
     1921 agaaggcggc gcgggaggag aaggaggacc ccaccgcggg gatgccgccg gaggcgaagg
     1981 tgcactggat ggtgctgcac cggaagaagg aggggatcga ggacgcgctc gatgccgccg
     2041 gcgtccgcga caatccggtg cgcgtgctga acgaggtgct gctgccggcg atgaaggagg
     2101 tgggggacaa gttcggcgcc ggcgagctca ttctcccgtt cgtgctgcag tccgccgaag
     2161 cgatgaagaa ggcggtgaag cacctcgagc agttcctcga gaaggccgag gggtacacca
     2221 aggggcgcgt cgtcctcgct accgtctatg gagacgtgca cgacatcggg aagtcgctcg
     2281 tcaacacgat cctctcca
//
LOCUS       DASSYW010000713         2029 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1295050, whole genome shotgun sequence.
ACCESSION   DASSYW010000713 DASSYW010000000
VERSION     DASSYW010000713.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2029
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1295050"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..533)
                     /locus_tag="VFN38_11365"
     CDS             complement(<1..533)
                     /locus_tag="VFN38_11365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012406.1"
                     /translation="MRDFLQSIHYNYWILPALLAIPLLGALLVLFTGRRIEEGEDEVA
                     SGAARGPRVLATAIFALEFLLSVGLWWAFDPAYDGWQQSFDRAWIPSWGIRFTLGLDG
                     IALMMVLLTTFIMLLASYGSFTSIRRKARAYYALLLVLTTGMLGVFMALDLFLFYVMW
                     EAMLIPMYFIVGIWGGER"
     gene            complement(538..>2029)
                     /locus_tag="VFN38_11370"
     CDS             complement(538..>2029)
                     /locus_tag="VFN38_11370"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050136 - NADH dehydrogenase (quinone)
                     activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HET9012407.1"
                     /translation="ANLGRLDFVGVNALAEQLPFGGVVVTAICLFFFLGCAGKSAQIP
                     LYVWLPDAMAGPTPVSALIHAATMVTAGVYLIARSSTLFALAPVAGLTVVLVGGLTAI
                     FAASIGLKQWDIKKVLAYSTVSQLGYMFVGVGSGAYVAGIFHLMTHAFFKALLFLGSG
                     SVIYAMHAAYHATHSHEDAQDMRNMGGMKKYMPITWVLMWAATLAIAGVPPFAGFFSK
                     DEILGSLFLRAGHSTLADARLLGIPGSAILYFVYVIGLAAAFMTAVYMTRMMLYTFHG
                     PNRTGEREREHLREAPWIMTGPLVVLGVLSVIGGWFNIPAVLPVGPIGALEHWLEPVV
                     GEPALRAAGGTLPEATHALEYSLIGAAIVIALAGIALAFARLKPERLVPKAQSPAEHG
                     FERVLANKYFVDEAYDAAIVHPVVGVSRGLLWRGVDVGLIDRLTRLLVQSKDDDAAPG
                     TSVPMGGWLTRAVGYLGSQLQSGRVGTYAWVLVVGVLFVLGAFSFR"
BASE COUNT          387 a          683 c          699 g          260 t
ORIGIN      
        1 cgttccccgc cccagatccc gacgatgaag tacatcggga tcagcatcgc ctcccacatc
       61 acgtagaaca ggaacagatc gagcgccatg aagacgccga gcatgcccgt ggtgaggacg
      121 agcagcaacg cgtagtacgc gcgcgccttg cgccggatcg acgtgaagct cccgtacgac
      181 gcgagcagca tgatgaaggt cgtcaggagg accatcatca acgcgatgcc gtcgagaccg
      241 agcgtgaagc ggatgcccca cgagggaatc cacgcgcggt cgaagctctg ctgccagccg
      301 tcgtaggccg gatcgaacgc ccaccagagc ccgacggaaa ggaggaactc gagcgcgaag
      361 atcgcggtcg cgagcacgcg cggacctcgt gcggcgcccg acgcgacctc gtcctctccc
      421 tcctcgatgc gtcgcccggt gaacagcacg agcagcgcgc cgagcagcgg gatcgccagc
      481 agcgccggga ggatccagta gttgtagtga atggactgca ggaagtcgcg catcgcgtta
      541 gcggaagctg aaggcgccca ggacgaacag cacgccgacg acgagcaccc aggcgtaggt
      601 gccgacgcga cccgattgga gctgcgaacc cagatagccg acggcgcgcg tcagccagcc
      661 gcccatcggc acgctggtgc cgggcgcggc gtcgtcgtcc ttgctctgca cgaggagacg
      721 cgtcagccgg tcgatcaatc cgacgtccac gccgcgccac agcaggccgc gcgacacgcc
      781 gaccacgggg tgcacgatcg cggcgtcgta cgcctcgtcg acgaagtact tgttggcgag
      841 cacccgctcg aacccgtgct ctgccggcga ctgtgccttg gggacgagcc gttccggctt
      901 gagccgggcg aaggcgaggg cgatgccggc cagcgcgatg acgatggccg caccgatcag
      961 cgaatactcg agcgcgtgcg tggcctcggg gagcgtaccc cccgcggcgc gcaacgccgg
     1021 ctccccgacc accggctcca gccagtgctc gagcgccccg atcgggccga ccggcagcac
     1081 cgcagggatg ttgaaccagc cgccgatcac gctcaggaca ccgaggacga cgagcggccc
     1141 ggtcatgatc cagggcgctt cgcgcagatg ctcgcgttcc cgttcaccgg tccggttcgg
     1201 gccgtggaag gtgtagagca tcatgcgggt catgtagacg gcggtcatga acgccgccgc
     1261 caggccgatg acgtagacga agtagaggat cgcgcttccc gggatgccga gcaaccgcgc
     1321 gtcggccagc gtggagtgac ccgcgcgcag gaagagcgag ccgaggatct cgtccttcga
     1381 gaagaagccg gcgaagggcg gcacaccggc gatggcgagg gtcgcggccc acatcagcac
     1441 ccacgtgatg ggcatgtact tcttcatccc gcccatgttg cgcatgtcct gcgcgtcctc
     1501 gtggctgtgc gtggcgtgat acgccgcgtg catggcgtag atcaccgagc ccgagccgag
     1561 gaagaggagc gccttgaaga aggcgtgcgt catcaggtgg aagatgccgg cgacgtacgc
     1621 tcccgacccc acgccgacga acatgtagcc gagctgggag acggtggagt acgcgagcac
     1681 cttcttgatg tcccactgct tcaagccgat cgacgcggcg aagatcgcgg tgagcccccc
     1741 gaccagcacg accgtgaggc cggccaccgg ggcgagcgcg aacagcgtgc tgctccgggc
     1801 gatgaggtag acgcccgccg tcaccatcgt ggcggcgtgg atcagcgccg agacgggcgt
     1861 cgggccggcc atggcgtccg gcagccagac gtacagcggg atctgcgcgc tcttgcccgc
     1921 gcacccgagg aagaagaaca ggcagatcgc cgtgaccacc acgccgccga acggcagctg
     1981 ctcggccagc gcgttcacgc cgacgaaatc gagtcggccc aggttcgcg
//
LOCUS       DASSYW010000714         2059 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_876142, whole genome shotgun sequence.
ACCESSION   DASSYW010000714 DASSYW010000000
VERSION     DASSYW010000714.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2059
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_876142"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1509)
                     /locus_tag="VFN38_11375"
     CDS             complement(<1..1509)
                     /locus_tag="VFN38_11375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012408.1"
                     /translation="MRRRVAGILGAVGLVLGAAAWRAPVLFGPDWNILLAPALHRITV
                     AGDTIWVAGFDIDVQSVRGVRYYLVRPGTRWTRVDDPPSLARAREPEVTDTTFELEGG
                     ARAHFAWRRDGIEARVPTLTLADGRVVSLHADVPTTVSAGLADPEWVVGPTAADVSFG
                     HASRTWLVTPHAYWFGLDGGFSEGDGVLGGLLRVDRTSGAVVTLAHPYLADVSITSMI
                     AIGDTLFMGTERDGEYGAWGTQGLVRYEPARDRWRLERTGPGGLPDRLIWSVARAGDS
                     LVATTGTGVAIRSLADSAWTSWHFKPQVTDSSVPMALVPVADTATVAELIARYLWQEH
                     LVARPADFVRRFDRLSRHRQQELASAGQAIDALADTLFIPELAALARDTAVGGYRARA
                     IDLLAAMHHPLATLAARGGAATDAVQDAAASIRLVVAGDAVTRDSVTRRMQGTLDDFR
                     WALAVAVGARDDRWVPVIARRAAGADTALRRDIYGALALLATPAATRELFGFA"
     gene            complement(1512..>2059)
                     /locus_tag="VFN38_11380"
     CDS             complement(1512..>2059)
                     /locus_tag="VFN38_11380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATPase, T2SS/T4P/T4SS family"
                     /protein_id="HET9012409.1"
                     /translation="VGELRDLETVSIAIETAETGHLVFGTLHTTTAAGTIDRIIDQFP
                     ADRQSQIRVMLAESLKGVISQTLCKKIGGGRVAAREVLLSITAVTNLIREGKTFQIPT
                     VMQTSKRLGMVTLNDALMELVDGKLIEPAEGYGKAVDKVMYVNSLRSRGLDTSFAESD
                     PGIAKEAAKEPAKPAAAPAKR"
BASE COUNT          305 a          743 c          718 g          293 t
ORIGIN      
        1 ggcgaagccg aagagctcgc gcgtcgcggc gggggtggcg agcagggcaa gcgcgccgta
       61 gatgtccctc cggagcgccg tgtcggcgcc cgcggcacgc cgtgcgatga cgggcaccca
      121 tcggtcgtca cgcgcaccga cggcgaccgc cagcgcccag cgaaagtcgt ccagcgtgcc
      181 ctgcatgcgc cgcgtcaccg agtcgcgcgt gaccgcgtcc cccgcgacga cgagccggat
      241 cgaggccgcg gcgtcctgca ccgcatccgt cgccgctccg ccgcgcgccg ccagcgtcgc
      301 cagcggatga tgcatcgccg cgagcaggtc gatggcgcgc gcgcggtaac cgcctaccgc
      361 cgtatcgcgg gcgagtgcgg caagctccgg gatgaacagg gtgtccgcca gcgcatcgat
      421 cgcctggccg gcgctcgcca gctcctgctg gcggtgccgg gagagccggt cgaagcgccg
      481 cacgaagtcg gccggccgcg cgacgagatg ttcctgccat aggtatcggg cgatcagctc
      541 ggcgaccgtc gccgtgtcgg ccacgggcac gagcgccatc ggcacgctgc tgtcggtgac
      601 ctgcggcttg aagtgccacg acgtccacgc gctgtcggcg agcgagcgga tggcaacccc
      661 ggtgcccgtg gtggccacga gcgagtcgcc cgcgcgcgcg accgaccaga tgagtcgatc
      721 gggaaggcca cccggccctg tcctttccag gcgccaccga tcgcgcgcag gctcgtagcg
      781 caccagtccc tgtgtccccc acgcgccgta ctcgccgtcg cgttccgttc ccatgaacag
      841 cgtatcgccg atggcgatca tggatgtgat gctgacgtcg gcgagatacg gatgcgcgag
      901 cgtgacgacg gcgccgctgg tgcggtcgac gcgcaggagt ccgccgagca cgccgtcacc
      961 ctcgctgaaa ccgccatcga gcccgaacca gtacgcatgt ggcgtgacga gccacgtccg
     1021 cgaggcatgt ccgaacgaca cgtccgccgc ggtcggcccg accacccatt ccggatcagc
     1081 gaggcctgcg ctcaccgtcg tggggacgtc ggcgtgcagc gacacgacgc ggccgtcggc
     1141 gagggtgagc gtggggacac gcgcctcgat gccgtcccgg cgccaggcga agtgcgcacg
     1201 cgccccgccc tcgagttcaa atgtcgtgtc ggtcacctcg ggctcgcgcg cgcgcgccag
     1261 cgacggcggg tcatcgacgc gcgtccacct cgtcccgggg cgcaccaggt agtatcgaac
     1321 gccgcggact gactggacgt cgatgtcgaa gccggcgacc cagatggtgt cgccggcgac
     1381 agtgatccgg tggagcgccg gcgcgaggag gatgttccag tcgggtccga acaacaccgg
     1441 ggcacgccac gcggcggcac ccagcacgag cccgaccgcc cccaggatgc cggcgacccg
     1501 gcgacgcatg ctcagcgctt ggcgggagcc gcggcgggct tcgccggctc cttggccgct
     1561 tccttcgcga tccccggatc gctctcggcg aagctcgtgt ccaggccgcg cgaccgcagg
     1621 ctgttcacgt acatcacctt gtccaccgcc ttgccgtagc cttccgccgg ctcgatcagc
     1681 ttgccgtcca cgagctccat gagcgcgtcg ttgagcgtca ccatgccgag gcgcttcgac
     1741 gtctgcatca cggtcgggat ctggaaggtc tttccctcgc ggatgaggtt cgtgaccgcg
     1801 gtgatcgaca acagcacctc gcgcgccgcc acgcgcccac cgccgatctt cttgcagagg
     1861 gtctgcgaga tcacgccctt cagcgactcg gcgagcatga cgcggatctg tgactgccga
     1921 tcggcaggga actgatcgat gatgcggtcg atcgtgcccg cggcggtggt ggtgtgcagc
     1981 gttccgaaga ccaggtgccc ggtctccgcg gtctcgatcg cgatggacac ggtctcgaga
     2041 tcgcgcagct cgccgacga
//
LOCUS       DASSYW010000715         2798 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1345577, whole genome shotgun sequence.
ACCESSION   DASSYW010000715 DASSYW010000000
VERSION     DASSYW010000715.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2798)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2798)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2798
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1345577"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..790)
                     /locus_tag="VFN38_11385"
     CDS             complement(<1..790)
                     /locus_tag="VFN38_11385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012410.1"
                     /translation="MLINRSMARRRALPFLLTAAVASVTACSGKGPGADTASVKGRAA
                     GGDVSADSARRAAAAPAAATAQVPSRGDEKLPDSELPKRPRRDSVALASMTKPDSTLD
                     KLWPVKMPPPLAGAVLPNNRIVAFYGNPLSKKMGVLGEYPKDEMLAKLDHEVSRWAKA
                     DPSHPVIPALHLIVTVAQGAPGKNGLYRLQMRDSMVNEIYSWIKAKKGLFFVDVQVGK
                     STLEAELPRLRPILENPDVHLAVDPEFSMAPSGRVPGTKIGTLDA"
     gene            941..1378
                     /locus_tag="VFN38_11390"
     CDS             941..1378
                     /locus_tag="VFN38_11390"
                     /inference="COORDINATES: protein motif:HMM:NF024212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HET9012411.1"
                     /translation="MADDCRDTLPSCALTLLLLDAARAVEARAEGALAEVGLSLAKLG
                     ALRHLLIAAEPLTLSQLAERHCCGKSNITQLVDRLEADGLVARVNDPDDRRTVRATVT
                     PAGRAAYERASVILAEHERSIDSQLGSGPRADLARGLRALREG"
     gene            complement(1400..2581)
                     /locus_tag="VFN38_11395"
     CDS             complement(1400..2581)
                     /locus_tag="VFN38_11395"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HET9012412.1"
                     /translation="MDAGGRMDDRRSSGDRREGAPPTGGGRRGAKRTTSPLTYVLRAL
                     GAVVILLGVIVYAVRVTRPVYATRGTLGEELRKHAPEVAAVLNPADSTAIDQFVQTPK
                     FEEEKRNFFEDVMRLKQVDSARADSIAHFAVREAYRRGISPAIIFGVMLTENSRFVSN
                     AKSNVGAVGLMQVYPKIWLTKEMTKLFGRDLSTDSTNVKYGVFILNQYFRPKDKKGQV
                     RDRDWATALLRYNGCVNGTNTPRCHTYPSKVKGFIENQGTSICNGRGFYDCIAKPFIN
                     GLLGGSKDSSSTPATSTAPPATAPVAATVQQAAEPIPSPPPTPLAVPAAAPKATPPAA
                     EKASTRSSASPVTRKPSPKKAVAKKPAPKKRTTTTRKPRASRAEPDIPPPPKPITIKV
                     P"
     gene            complement(2589..2717)
                     /locus_tag="VFN38_11400"
     CDS             complement(2589..2717)
                     /locus_tag="VFN38_11400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012413.1"
                     /translation="MSKLLRGLAAGYGAKKMGGGCFSTILIFLLLWWLLGHFGLFR"
BASE COUNT          398 a          965 c          963 g          472 t
ORIGIN      
        1 tcgcgtcgag cgtgccgatc ttggtccccg gcaccctgcc cgacggcgcc atggagaact
       61 ccggatccac cgcgaggtgg acgtccggat tctcgaggat cggacgcagt ctcggcagct
      121 ccgcttcgag cgtgctcttg ccgacctgca cgtccacgaa gaagagcccc ttcttcgcct
      181 tgatccacga atagatctcg ttcaccatcg agtcgcgcat ctgcaggcgg tacaggccgt
      241 tctttcccgg tgccccctgc gccacggtca cgatcaggtg aagggcgggg atcaccggat
      301 ggctcggatc cgccttcgcc caccgcgaca cctcgtgatc cagcttggcc agcatctcgt
      361 ccttcggata ctcgccgagc acgcccatct tcttggagag cggattcccg tagaacgcca
      421 cgatgcggtt gttcgggagc acggcgccgg cgagcggcgg cggcatcttc accggccaca
      481 gcttgtccag ggtggagtcg ggcttggtca tgctcgccag cgccacgctg tcgcgccgag
      541 gacgcttcgg cagctcgctg tcgggcagct tctcgtcccc gcggctgggc acctgcgccg
      601 tggcggccgc cggtgcggcg gctgcgcggc gtgcggagtc cgcgctcacg tcccccccgg
      661 cggcgcgacc cttcacggac gccgtgtcgg cgccggggcc cttgcccgag caggcggtga
      721 cggacgcgac agctgcggtc aggaggaacg ggagggcgcg acggcgcgcc atcgaacgat
      781 tgatcagcac gtgcggggtg ggtagtaggg atgagcctgt atgatcccgg ctaacgggga
      841 tgctagccgg gcacggtgca agcgccaagc cccgttggag gcaagggatg cgcctccgcc
      901 ccgttgacgg gcggcctcgt ccacctctag ccttcaaccc atggccgacg actgtcgcga
      961 taccctgccg agctgtgcgc tcacgctgct gctgctcgac gccgcccgcg ccgtcgaggc
     1021 ccgcgcggag ggggcgctcg ccgaggtcgg cctctcgctc gccaagctcg gagcgctgcg
     1081 gcatctattg attgccgccg agccgctcac gttgtcgcaa ctcgccgagc ggcactgctg
     1141 tggcaagtcg aacatcacgc agctcgtcga ccggctcgag gcggacggcc tggtggcgcg
     1201 cgtgaacgat cccgatgacc ggcggacggt tcgcgccacg gtcacccccg ccggccgcgc
     1261 cgcctacgag cgcgccagcg tcatactggc cgagcacgag cgatccatcg attcacagct
     1321 cggctccggt ccacgagccg acctcgcgcg cggcttgagg gccctcaggg agggctgatc
     1381 gtcgccgccg gagtggccgt cacgggacct tgatcgtgat cggtttgggc ggcggcggaa
     1441 tgtcgggttc cgctcggctc gctcgcggct tccgggtggt cgtcgtccgc ttcttgggag
     1501 ctggcttctt cgcgaccgcc ttcttcggcg acggcttcct ggtcacgggt gacgcggacg
     1561 accgggtcga ggccttttcc gccgcgggag gcgtggcctt cggcgctgcg gccggaacgg
     1621 cgaggggtgt tggcgggggc gacggaatgg gctcggccgc ctgctgcacc gttgccgcga
     1681 ccggcgccgt cgcgggggga gcggtggaag tcgccggtgt ggacgaggaa tccttcgatc
     1741 ctcccagcaa cccgttgatg aacggcttgg cgatgcaatc gtagaagcct cggccgttgc
     1801 agatcgacgt cccctggttc tcgatgaatc ccttcacctt gctcggatag gtgtggcagc
     1861 gcggcgtgtt cgtgccgttg acgcacccgt tgtagcggag cagggcggtc gcccagtcgc
     1921 gatccctcac ctggcccttc ttgtccttgg gccggaaata ctggttgagg atgaagacgc
     1981 cgtacttcac gttcgtcgaa tcggtcgaga gatcccggcc gaacagcttg gtcatctcct
     2041 tcgtgagcca gatcttgggg tagacctgca tcaggcccac ggcccccacg ttcgacttcg
     2101 cgttggacac gaaccgggag ttctcggtga gcatcacgcc gaagatgatc gccggcgaga
     2161 tcccgcgccg atacgcttcg cgcaccgcga agtgcgcgat ggagtcggcg cgcgcggaat
     2221 ccacctgctt caggcgcatg acgtcctcga agaagttccg cttctcctcc tcgaacttgg
     2281 gcgtctgcac gaactggtcg atcgccgtgc tgtcggccgg gttgagcacc gcggccacct
     2341 ccggcgcgtg cttgcgcagc tcctcgccaa gcgtgccgcg ggtggcgtac acgggccggg
     2401 tcacgcgcac ggcgtagacg atcaccccga gcaggatgac caccgcgccc agcgcccgca
     2461 gcacgtacgt gagcggggac gtggtgcgct tcgcgccgcg ccgccctcca ccggtgggcg
     2521 gggctccctc gcggcgatcg ccgctggacc ggcggtcgtc catgcgtccg cccgcgtcca
     2581 tgacgacgct agcggaagag gccgaagtgg ccgagcagcc accacaggag caggaagatg
     2641 agaatggtgc tgaagcaccc gccgcccatc ttcttcgctc cataacccgc ggccaggccg
     2701 cgcagcagct tgctcatgtc ggcactccgg actggttcgt gtgcccgtcc ggagtgcagg
     2761 agccgtaccg ggaggcaacg ccccccggcc ggatcagc
//
LOCUS       DASSYW010000716         2108 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_95576, whole genome shotgun sequence.
ACCESSION   DASSYW010000716 DASSYW010000000
VERSION     DASSYW010000716.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2108)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2108)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2108
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95576"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..559)
                     /locus_tag="VFN38_11405"
     CDS             complement(<1..559)
                     /locus_tag="VFN38_11405"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HET9012414.1"
                     /translation="MRIVIADDSVLLREGIARILGDAGMDVVGQSEDADDLMLKVRSY
                     APDVAIVDIRMPPTHTDEGLRAAIAIRETYPDVGVLVLSQYVELGLAMKLLADSAEGA
                     GYLLKDRVSDVDEFIGAVRRVAAGGSAIDPTIVSTLLGRRRQDDPVAALTPLEKEVMA
                     LRAEGRSNQGIADHLVITLRAAEKYV"
     gene            complement(547..1950)
                     /locus_tag="VFN38_11410"
     CDS             complement(547..1950)
                     /locus_tag="VFN38_11410"
                     /inference="COORDINATES: protein motif:HMM:NF019350.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HET9012415.1"
                     /translation="MTLAFPSGRLRSTRERVVVGAGYAIALGLQIAKLMFLGSVPQNG
                     FAVADDFDTYRIIERVQLYSISAICLVAAAILLARWTAAGAPRRLWPSVLTVVFAVGL
                     VGLALLYTVAASEWPAFVTVQRTVLGIIGFTPILFLIGVLDARLARSGVSDLVVQLRG
                     NPDPDELQRALARTLRDPTLQLVYWLPEFGSYADADGHAVPLPGPADARALTPIQHDG
                     VRIAALLHDPVLSDERELMAGASAAAAIALENTRLQVELRARLEELRGSRTRIVEVAQ
                     DERKRLERNLHDGAQQRLVALSMELGRMESRLPQDAPERADLARARGEIASSLRELRQ
                     VAHGLHPAVVSSHGLDVALEQLAATAPVPVTLNVRVDRRLPEALEVAAYYLVSESLAN
                     VGKHAHATSVRVEVLRQDDAVLIEVADDGVGGADTEKGSGLRGLADRVEALGGRLRVW
                     SPAGGGTRVSAEIPCGS"
BASE COUNT          270 a          774 c          786 g          278 t
ORIGIN      
        1 agacgtactt ctcggcggcg cggagggtga tgaccaggtg gtcggcgatg ccctggttcg
       61 agcggccctc ggccctcagc gccatcacct ccttctcgag cggggtgagg gcggcgacgg
      121 ggtcgtcctg gcggcggcgg ccgaggaggg tggagacgat ggtggggtcg atcgccgacc
      181 ccccggcggc gacgcgccgg accgcgccga tgaactcgtc gacgtcgctg acgcggtcct
      241 tcagcaggta gccggcgccc tcggccgagt cggccagcag cttcatcgcc agccccagct
      301 ccacgtactg ggagagcacg agcacgccga cgtccgggta ggtctcgcgg atcgcgatgg
      361 cggcgcgcag gccctcgtcg gtgtgggtgg ggggcatgcg gatgtcgacg atcgcgacgt
      421 ccggcgcgta gctgcggacc ttcagcatca ggtcgtcggc gtcctcgctc tggcccacca
      481 cgtccatccc ggcgtccccc aggatgcggg cgatcccctc gcggaggagg acgctgtcgt
      541 cggcgatcac gatccgcacg ggatctccgc gctcacccgc gtgccgccgc cggcggggct
      601 ccacacccgg agccggccgc cgagggcctc cacccggtcg gccagcccgc gcaggccgga
      661 ccccttctcc gtgtcggccc cgccgacgcc gtcgtcggcc acctcgatga gcaccgcgtc
      721 gtcctgccgc agcacctcca cccgcaccga cgtcgcgtgc gcgtgcttgc cgacgttcgc
      781 gaggctctcg ctcaccaggt agtaggccgc cacctcgagc gcctccggca gccgccggtc
      841 gacgcggacg ttcagcgtca ccgggaccgg cgcggtcgcg gcgagctgct ccagggccac
      901 gtcgaggccg tgggagctca ccaccgcggg gtgcaggccg tgggcgacct gccgcagctc
      961 ccggagggag ctggcgatct cgccccgggc gcgcgccagg tcggcccgct ccggggcgtc
     1021 ctgcgggagg cggctctcca tgcggccgag ctccatggag agggccacca gccgctgctg
     1081 ggcgccgtcg tggaggttcc gctccaggcg cttgcgctca tcctgcgcca cttccacgat
     1141 ccgcgtccgc gacccgcgca gctcctccag ccgcgcgcgc agctccacct ggagccgggt
     1201 gttctccagc gcgatcgcgg ccgctgcgct ggcgcccgcc atcagctcgc gctcgtcgga
     1261 gaggaccggg tcgtgcagca gggccgcgat gcgcacgccg tcgtgctgga tcggcgtcag
     1321 cgcgcgcgcg tcggccggtc cgggcagcgg caccgcgtgg ccgtcggcgt cggcgtagct
     1381 gccgaactcc gggagccagt agacgagctg cagggtgggg tcgcggaggg tgcgggccag
     1441 cgcgcgctgg agctcgtcgg ggtcggggtt gccgcgcagc tggaccacca ggtcgctcac
     1501 cccgctgcgt gccagacggg cgtcgaggac gccgatcagg aagaggatcg gcgtgaagcc
     1561 gatgatgccg aggaccgtcc gctggaccgt cacgaacgcg ggccactcgg acgcggcgac
     1621 ggtgtagagc agcgccagcc ccacgaggcc gacggcgaag accaccgtca gcaccgacgg
     1681 ccacaggcgc cggggcgccc cggccgccgt ccaccgcgcc agcaggatcg ccgcggccac
     1741 caggcagatg gcggagatgc tgtagagctg gacgcgctcg atgatccggt aggtgtcgaa
     1801 gtcgtccgcc acggcgaagc cgttctgcgg gacggagccg aggaacatca gcttggcgat
     1861 ctggaggccc agcgcgatcg cgtagccggc gcccacgacc acccgctccc gcgtggagcg
     1921 caggcgcccg ctcgggaacg ccagcgtcac gtggatgaac gcggccgccg cgttcgtcca
     1981 cgtgacgctg gcgttcccgt ccggccggct gcgctcgacg cgcgaggtgg tggtcgtgtg
     2041 cgccgggtac gcggtcgcgc tcggcctcca ggtggccaag ctgatgttcc tggactcgat
     2101 tccgcaga
//
LOCUS       DASSYW010000717         2397 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_160609, whole genome shotgun sequence.
ACCESSION   DASSYW010000717 DASSYW010000000
VERSION     DASSYW010000717.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2397)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2397)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2397
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_160609"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..226)
                     /locus_tag="VFN38_11415"
     CDS             complement(<1..226)
                     /locus_tag="VFN38_11415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012416.1"
                     /translation="MRDAMAPRMDGRYRSVPLASIPICIVFFGMPRVSPAAVLAAGDQ
                     APSTADHILDVAGRLFFRRGFAATGVDLIVR"
     gene            253..936
                     /locus_tag="VFN38_11420"
     CDS             253..936
                     /locus_tag="VFN38_11420"
                     /inference="COORDINATES: protein motif:HMM:NF015747.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HET9012417.1"
                     /translation="MQIGIFGTGIVGQTIASALAAKGHSVMIGTRDPAATLHRDSGNV
                     FNTTPFRDWQIANPTVKLGTFADAARFGDAIVNATSGEGALPALQAAGATVLGTKIVL
                     DVANPLDFSRGMPPTLTVCNTDSLGEQLQRAFPKVRIVKTLNTTNVMVMVNPAAVAGG
                     DHSMFVCGNDADAKASVTKWLGEWFGWRDVIDLGDITTARGTEMLLPIWIRLWGALGN
                     PMFNFKIAR"
     gene            complement(949..1851)
                     /locus_tag="VFN38_11425"
     CDS             complement(949..1851)
                     /locus_tag="VFN38_11425"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HET9012418.1"
                     /translation="MASEHIDRAAAELARSREKRGRDERTRFDPSTAGPMVSDEDQFR
                     LLIAAVADYAIITLDASGRVTSWNDGARRIKGYEASEVLGRHFALFYPLEDIERGKAQ
                     AELSAARESGYFEEEGWRVRKGGERFWAHVSLTVLRDESSAVRGFAKITRDLTERERA
                     RAAVAQLTIVEGQLQAAETARDEAEQAERCLLGIVGAMSDGYFTLDEQWRFTFVNPSL
                     ARLLGTPGRDLVGASFWDEVTDSIHSKFFRYLPELLTAQRLVEFTELHAPTRRWFSVR
                     AERTDGGIGVLLRDVTAEQGQRSG"
     gene            complement(1954..>2397)
                     /locus_tag="VFN38_11430"
     CDS             complement(1954..>2397)
                     /locus_tag="VFN38_11430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012419.1"
                     /translation="VEPPAELWPLVVASTSEWPRMRRQVLRSLNRPLTVAAFVLVVLS
                     SALTAWVMTRSPRDDTAAVVTAALREDATMDRALSARDHDPSPIAGESVQELRRRLRS
                     VDDALRRAPDDESLYRSLAGRERLLGEIRTALGMGPRAPRAPMAP"
BASE COUNT          378 a          862 c          810 g          347 t
ORIGIN      
        1 cacgcacgat caggtcgacg ccggtcgcgg cgaagcctcg gcggaagaag agccttccgg
       61 cgacgtcgag gatgtggtcg gccgtggagg gcgcctgatc gccggcggcg agcacagcgg
      121 ctggtgatac gcgcggcatg ccgaagaata cgatacagat cggtattgac gcaagcggta
      181 cagatctgta tcgtccatcc attcgcggcg ccatcgcgtc gcgcacgatt cgaacgcctc
      241 actcaacgac ccatgcagat cggaatcttc ggcaccggca tcgtcggcca gacgatcgcc
      301 tcggcgctcg cggccaaggg acacagcgtc atgatcggca cgcgcgaccc cgcggcgacg
      361 ctgcatcgcg actccggcaa cgtcttcaac acgacgccct tccgcgactg gcagatcgcc
      421 aatcccaccg tgaagctcgg caccttcgcc gacgcggcgc gcttcggcga tgccatcgtc
      481 aacgccacgt ccggagaggg cgcgcttccc gcgctccagg ccgcgggcgc caccgtgctc
      541 ggcaccaaga tcgtgctcga cgtcgccaac ccgctcgact tctcgcgcgg catgccgccg
      601 acgctgaccg tctgcaacac ggactcgctg ggagagcagc tccagcgcgc ctttcccaag
      661 gtgcgcatcg tgaagacgct caacacgacg aacgtcatgg tgatggtgaa cccggccgcc
      721 gtggcggggg gcgatcactc catgttcgtg tgcggcaacg acgcggacgc caaggcgagc
      781 gtgacgaagt ggctcggcga gtggttcggc tggcgcgacg tcatcgacct gggcgacatc
      841 accaccgcgc gcggcaccga gatgctgctg ccgatctgga tccgactctg gggcgcgctg
      901 ggcaacccga tgttcaactt caagatcgcc cgctgaacgg cgcgctgctc acccgcttcg
      961 ctgaccctgc tcggccgtca cgtcccgcag cagcacgccg atcccgccgt cggtgcgctc
     1021 cgcgcggact gagaaccagc ggcgcgtcgg cgcgtgcagc tcggtgaact ccacgagtcg
     1081 ctgcgcggtg agcagctcgg ggagatagcg gaagaacttg gaatggatgg agtccgtgac
     1141 ctcgtcccag aacgacgcgc cgacgaggtc gcggccgggc gtgccgagca ggcgcgccag
     1201 ggacggattg acgaaggtga agcgccactg ctcgtcgagc gtgaagtacc catcgctcat
     1261 cgcgccgacg atgccgagca ggcagcgttc cgcctgctcg gcctcgtcac gcgcggtctc
     1321 cgccgcctgc agctgccctt ccacgatcgt caactgcgcc acggcggcgc gcgcgcgctc
     1381 ccgctccgtc aggtcgcgcg tgatcttggc gaagccgcgc accgcgctag actcgtcgcg
     1441 gagcaccgtg agcgacacgt gcgcccagaa gcgctcgcca cccttccgga cgcgccagcc
     1501 ttcctcctcg aagtaccccg attcgcgcgc ggccgagagc tcggcctgcg ccttcccccg
     1561 ttcgatgtcc tcgagcgggt agaacagggc gaagtggcga cccagcacct cgctcgcctc
     1621 gtaccccttg atgcggcgcg ccccgtcgtt ccaggaggtg acgcgtcccg acgcatcgag
     1681 cgtgatgatc gcgtagtccg ccacggcggc aatgagcagc cggaactgat cctcgtcgct
     1741 gaccatcgga ccggcggtgc tggggtcgaa gcgggttcgc tcgtcgcgcc cccgcttctc
     1801 gcgcgagcgc gccagctcgg ccgctgccct gtcgatgtgc tcgctcgcca tgcgctcatc
     1861 cctgtcgacg ttgtggatgc gtcccgtcta acatgacgcg ggcgtgcgcc ctgtccagtg
     1921 tggcgacgga ccgtggcgcg ccgcgagggc acgtcagggt gccatgggcg ccctcggcgc
     1981 gcgcgggccc atgcccagcg cggtgcgaat ctcacccagc aaccgctcgc gtccggcgag
     2041 cgagcgatag aggctctcgt cgtccggggc gcgtcgcagc gcatcgtcga cggagcgcag
     2101 acgacgccgc agctcctgga cgctctcgcc agcgatgggc gaagggtcgt ggtcgcgcgc
     2161 ggacagggcg cggtccatgg tggcatcctc gcgcagcgcc gcggtcacga cggccgccgt
     2221 gtcgtcgcgc ggcgaccgcg tcatcaccca ggccgtcagc gcagacgaca gcacgacgag
     2281 gacgaaggcg gccaccgtga gcggcctatt caacgagcgg agcacctggc gtcgcatgcg
     2341 cggccactcg ctggtggatg cgacgacgag cggccacagc tccgccggcg gctcgac
//
LOCUS       DASSYW010000718         4515 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1404544, whole genome shotgun sequence.
ACCESSION   DASSYW010000718 DASSYW010000000
VERSION     DASSYW010000718.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4515)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4515)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4515
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1404544"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..182
                     /locus_tag="VFN38_11435"
     CDS             <1..182
                     /locus_tag="VFN38_11435"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HET9012420.1"
                     /translation="SILGSTMGNDAEFAAVVGHFNAGRLRPPVDRVYPLAEGRAAFER
                     LERGGQFGKIVLRID"
     gene            182..559
                     /locus_tag="VFN38_11440"
     CDS             182..559
                     /locus_tag="VFN38_11440"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF024675.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HET9012421.1"
                     /translation="MRVPLQTRYNDYDARGHVNNAVYLGYFEIGRMMAWQSACSDFEP
                     DFILAEARVAYRSPALIGEPLAVVVTTSEIRTKAWVWSYRIVDERDGRLVADGTTTQV
                     MYDYAIRQTVPIPAALREALGRI"
     gene            631..2979
                     /locus_tag="VFN38_11445"
     CDS             631..2979
                     /locus_tag="VFN38_11445"
                     /inference="COORDINATES: protein motif:HMM:NF006101.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003959 - NADPH dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional salicylyl-CoA
                     5-hydroxylase/oxidoreductase"
                     /protein_id="HET9012422.1"
                     /translation="MRIVVIGGGPAGLYAALLLKQWRAGDDVVVLERNRPDDTFGWGV
                     VFSDQTLENFRAADEPTYRAITESFAHWDDIDVVVRGRRITSGGHGFSGIARRKLQQI
                     LQERAREVGVELRFSTEVSGLADLEALGLGGADVVVAADGVNSAIRRELAADFQPDLD
                     VRPARFVWLGTTLPLDAFTFFFVENEHGVFQAHCYRFDEHTSTFIVECDERSWRAAGL
                     DKLDAPQTVAACEALFAEALGPHRLMSNAAHRAASPWATFTRVRNARWWRDNVVLVGD
                     AAHTAHFSIGSGTKLAMEDAIALARALAESGDVPSAFRRYEGERVTESLRLQNAARNS
                     MEWFEHVARYIALPPEQFAYSLLTRSQRVSHENLRLRDATYVAGVERWFASRASRALG
                     AGAATSSAAASIPPMFTPYRLRELTLANRVVLAPMDMYSARDGVPNDFHLVHLGARAL
                     GGAGLVMTEMVCVSPDARISLGCTGLYTPEHREHWRRVVEFVHGWSSAKICLQLGHSG
                     RKGSTRYPWEGADLPLERDGWETIGPSALAYAPVQPVPRAMNRTDMDRVRDDFVRATR
                     MAIDAGFDMLELHAAHGYLLSSFITPVSNARRDEYGGSLANRLRFPLEVFAAMRAAWP
                     AARPMSVRISATDWVEEGLSAEESVAVGRAFVDAGADIIHVSTGQTTSDASPVYGRLF
                     QTPFSDRIRNEGAVPTIAVGNVTEADQVNGIVAAGRADLVAIGRPHLSDPHWTLHAAA
                     SLGYQGAPWPRQYHLGRLQLEREVERARGAAAPPVQRGKGER"
     gene            2976..3770
                     /locus_tag="VFN38_11450"
     CDS             2976..3770
                     /locus_tag="VFN38_11450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HET9012423.1"
                     /translation="MSTATGERYLEQVHAVVTGGSRGIGAAIAEALLRRGASVTIMAR
                     DVAALDARVMALRHSGATVAGVECDVANEQSVDDAFARAVDVLGAPGILVNGAGVAES
                     APFGQTTRASWHRTIGVNLTGTFLCTAAVMPAMLGAGWGRVVNIASTAGLRGYKTMTA
                     YSASKHGVVGFTRALALETARHGVTVNAVCPGYTDTDMSDRAIANLVASLGKSPDEAR
                     AMLLKSIPRGQLTTPAEVAGAVAWLCSPAAAAVTGIAMPVAGGEIG"
     gene            3767..4276
                     /locus_tag="VFN38_11455"
     CDS             3767..4276
                     /locus_tag="VFN38_11455"
                     /inference="COORDINATES: protein motif:HMM:NF024212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HET9012424.1"
                     /translation="MSASRGDTVAVERPHAALRTWLGLLACSNLVEREVRRRLREEFG
                     TTLPRFDVLAQLDAAQRSDGAGAGLTMSELSRRLMVTNGNLTGLVERLVQEGVVSRAS
                     SASDRRSQIVRLTAAGKRALDAMVPAHERWIEELFGDLSSPDRAQLHALLGRLRTSIR
                     QSLTEADPS"
     gene            4273..>4515
                     /locus_tag="VFN38_11460"
     CDS             4273..>4515
                     /locus_tag="VFN38_11460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HET9012425.1"
                     /translation="MTLTTSAANLTPQHFGWRVHDRVAVVTLNRPERKNPLTLESYQE
                     LTDTFHALQHVNDVSAVVLTGAGENFCSGGDVHEIIG"
BASE COUNT          623 a         1598 c         1673 g          621 t
ORIGIN      
        1 ggtcgatcct cggatccacc atggggaacg acgccgagtt cgcggccgtc gtcgggcact
       61 tcaacgccgg tcgcctgcgg ccgccggtgg accgggtgta tccgctggcc gagggacgcg
      121 ccgccttcga gcgcctcgag cgcggcgggc agttcggcaa gatcgtcctg cggatcgact
      181 gatgcgcgtc ccgctccaga cgcgctacaa cgactacgac gcccgcggcc acgtcaacaa
      241 cgcggtgtat ctcggctact tcgagatcgg ccgcatgatg gcgtggcagt cggcgtgcag
      301 cgacttcgag cccgacttca tcctcgccga ggcgcgggtc gcctatcgca gcccggcgtt
      361 gatcggcgag cccctcgcgg tggtggtcac gacttcggag atccggacga aggcctgggt
      421 gtggagctac cggatcgtcg acgagcgcga cggccgcctc gtcgccgacg ggaccacgac
      481 gcaggtgatg tacgactacg ccatccggca gacggtgccg atacccgcgg cgctccggga
      541 ggcgctgggc cggatctgac gcgcgcggga cgaccggtcc gcgcggcggt ccggtcttgc
      601 gcccttgttt gaagcatata gtatcgggcc atgcggatag tcgtgatcgg tggcggaccg
      661 gccggcctgt atgccgcgct cctgctcaag cagtggcgcg ccggcgacga cgtcgtcgtg
      721 ctggagcgca accgcccgga cgacaccttc ggctgggggg tggtcttctc cgaccagacg
      781 ctggagaact tccgggcggc cgacgagccc acctatcgcg cgatcacgga gagcttcgcg
      841 cactgggacg acatcgacgt cgtcgtgcgg ggccgccgca tcacttcggg cggccacggg
      901 ttcagcggca tcgcgcggcg gaagctgcag cagatcctcc aggagcgggc gcgcgaggtg
      961 ggggtggagc tgcgtttctc caccgaggtg agcgggctcg ccgacctcga ggcgctcggg
     1021 ctcggcggcg ccgacgtggt cgtcgcggcg gacggggtga acagcgcgat aaggcgcgag
     1081 ctcgccgccg acttccagcc cgacctggac gtgcgccccg cgcgattcgt ctggctcggc
     1141 accaccctcc ccctcgacgc cttcaccttc ttcttcgtcg agaacgagca cggcgtgttc
     1201 caggcgcact gctaccggtt cgacgagcac acctcgacgt tcatcgtgga gtgcgacgag
     1261 cgctcgtggc gcgccgccgg cctggacaag ctcgacgcgc cgcagacggt ggccgcctgc
     1321 gaggcgctgt tcgccgaggc gctcggcccg caccggctga tgtcgaacgc cgcgcaccgg
     1381 gcggcgtcgc cgtgggccac cttcacccgc gtccgcaacg cccgctggtg gcgcgacaac
     1441 gtggtgctcg tgggcgacgc ggcgcacacc gcccacttct ccatcggctc cggcaccaag
     1501 ctggccatgg aggacgccat cgcgctggcc cgcgccctcg ccgagagcgg cgacgtgccg
     1561 agcgccttcc ggcgctacga gggcgagcgg gtcaccgaat cgctgcggct gcagaacgcg
     1621 gcgcgcaact cgatggagtg gttcgagcac gtcgcccgct acatcgccct gcctcccgag
     1681 cagttcgcct acagcctgct cacccgcagc cagcgcgtga gccacgagaa cctccggctg
     1741 cgcgacgcca cctacgtggc cggcgtcgag cgctggttcg ccagccgcgc gtcgcgcgcg
     1801 ctcggcgccg gagcggcaac gtcctccgcc gccgcgtcca ttccgccgat gttcaccccg
     1861 taccggctgc gcgagctcac cctcgccaat cgcgtggtgc tcgcgccgat ggacatgtac
     1921 agcgcgcggg acggcgtccc caacgacttc cacctcgtgc acctcggcgc ccgcgcgctg
     1981 gggggcgcgg ggctggtgat gacggaaatg gtgtgcgtgt cgcccgacgc ccgcatcagc
     2041 ctcggctgca cggggctgta cacccccgag caccgggagc actggcgtcg cgtggtggag
     2101 ttcgtgcacg gctggtccag cgcgaagatc tgcctccagc tcgggcactc gggccggaag
     2161 ggctccacgc ggtatccgtg ggaaggggcc gacctgccgc tcgagcgcga cgggtgggag
     2221 acgatcgggc cgtcggcgct ggcgtatgcg ccagtgcagc cggtgccgcg cgccatgaat
     2281 cgcacggaca tggaccgcgt gcgcgacgac ttcgtgcgcg cgacgcggat ggcgatcgac
     2341 gccggcttcg acatgctcga gctgcacgcg gcccacggct atctgctgtc gagcttcatc
     2401 acgccggtga gcaacgcgcg ccgcgacgag tacggcggct cgctcgccaa ccggttgcgc
     2461 tttccgctgg aggtgttcgc cgcgatgcgc gccgcatggc ccgccgcgcg gccgatgtcg
     2521 gtgcgcatct cggctaccga ctgggtggag gaggggctct cggcggagga atcggtggcg
     2581 gtgggccgcg ccttcgtgga cgcgggcgcc gacatcatcc acgtctccac cgggcagacc
     2641 acgagcgacg cgtcgccggt gtacggccgc ctgttccaga cgccgttcag cgaccggatc
     2701 cggaacgagg gagccgtgcc gacgatcgcg gtgggcaacg tgaccgaggc cgaccaggtg
     2761 aacggcatcg tcgcggcggg gcgcgccgac ctggtggcga tcgggcgccc gcacctgagc
     2821 gatccgcact ggacgctgca cgccgccgcg tcgctcggct accagggcgc gccctggccc
     2881 cggcagtatc atctcggacg tctccagctc gagcgcgagg tggagcgcgc gcgcggcgcg
     2941 gcggcgccac ccgtacagcg agggaaaggg gagcgatgag cacggccacg ggagagcggt
     3001 acctcgagca ggtccatgcg gtcgtgaccg gggggagccg cgggatcggc gccgcgatcg
     3061 ccgaggcgct gctgcggcgc ggcgcgtcgg tgacgatcat ggcgcgcgac gtcgcggcgc
     3121 tcgacgcccg ggtgatggcg ctccggcatt ccggcgcgac cgtcgcgggg gtggagtgcg
     3181 acgtggcgaa cgagcagagt gtggacgacg cgttcgcgcg tgccgtggac gtgctgggag
     3241 cgccggggat cctcgtgaac ggagcggggg tggcggagag cgcgccgttc gggcagacga
     3301 cgcgcgcgtc gtggcatcgc acgatcgggg tcaacctcac cggcaccttc ctctgcacgg
     3361 cggcggtgat gccggccatg ctgggcgcgg gctggggccg cgtggtgaac atcgcgtcga
     3421 cggccgggct gcggggctac aagacgatga ccgcgtacag cgcctcgaag cacggcgtgg
     3481 tggggttcac gcgcgccctc gcgctggaga ccgcccggca cggggtcacg gtgaacgcgg
     3541 tgtgcccggg ctacaccgac accgacatgt ccgaccgcgc gatcgccaac ctcgtcgcct
     3601 cgctcgggaa gtcgccggac gaggcgcggg cgatgctgct caagtcgatc ccgcgggggc
     3661 agctcaccac gccggcggag gtggcgggcg cggtggcgtg gctgtgcagc ccggccgccg
     3721 cggcggtcac cggcatcgcc atgccggtgg ccggggggga gatcggatga gcgccagccg
     3781 gggcgatacc gtggcggtgg agcggccgca cgccgcgctg cgcacatggc tggggctcct
     3841 cgcctgctcg aacctcgtcg agcgggaggt gcgccgccgg ctgcgcgagg agttcggcac
     3901 caccctgccg cgcttcgacg tgctggcgca gctcgacgcg gcgcagcgaa gcgacggtgc
     3961 cggcgccggg ctcacgatga gcgagctctc gcgccgcctc atggtgacga acggcaacct
     4021 caccgggctg gtcgagcggc tggtgcagga gggcgtcgtc agccgggcgt cgtccgccag
     4081 cgaccgccgc tcgcagatcg tccgcctcac cgccgcgggc aagcgcgcgc tcgacgcgat
     4141 ggtgcccgcg cacgagcggt ggatcgagga gctgttcggc gacctgtcgt cccccgaccg
     4201 cgcgcagctg cacgccctgc tgggcaggct gcgcacatcc atcaggcagt ccctcaccga
     4261 ggccgatccg tcgtgaccct gaccacctcc gcggcgaacc tcaccccgca gcacttcggc
     4321 tggcgggtgc acgaccgcgt ggcggtcgtc acgctgaacc gccccgagcg caagaacccg
     4381 ctcaccctgg agtcgtacca ggagctcacc gacaccttcc acgccctgca gcacgtcaac
     4441 gacgtctcgg ccgtggtgct caccggcgcc ggggagaact tctgcagcgg cggcgacgtg
     4501 cacgagatca tcggc
//
LOCUS       DASSYW010000719         3239 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_187694, whole genome shotgun sequence.
ACCESSION   DASSYW010000719 DASSYW010000000
VERSION     DASSYW010000719.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3239)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3239)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3239
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_187694"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..280
                     /locus_tag="VFN38_11465"
     CDS             <1..280
                     /locus_tag="VFN38_11465"
                     /inference="COORDINATES: protein motif:HMM:NF014525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HET9012426.1"
                     /translation="PTPSLAPPGAQSNQIVLEVSPDGYSINSEKVDEANLGRRLKEIY
                     DPRPEKIIFVKGDPKVKYEKVVHAMDVSRGSGVKVIGVPPKDTPGSGK"
     gene            405..1256
                     /locus_tag="VFN38_11470"
     CDS             405..1256
                     /locus_tag="VFN38_11470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012427.1"
                     /translation="MAYLDDSYTHDPPPPPARPTYRVPIGMPLRDDGRRASMLVSIAV
                     HAIIIGLLIVPFFLPDTVIARIEQGAGGPGPAGGGGGGRRGSGGTVESLRYVRLAPDP
                     VPTPTTLPAVTPPLPTPKPAPPTPTPVEPTPVKTPEQQSAVPAPQTTVASATPGVGGG
                     SGNDDTAGAGPGSGGGVGSGIGTGKGSASGPGTGGGTQANYPPQPIEFFLPPLPAPRD
                     VRGFKFTAEFDVDSTGRVLDVKYTETPNGDYNRRVFAVLRAMRFRPGTRPDGTPLRMK
                     AQLGYEF"
     gene            1406..2938
                     /locus_tag="VFN38_11475"
     CDS             1406..2938
                     /locus_tag="VFN38_11475"
                     /inference="COORDINATES: protein motif:HMM:NF012544.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HET9012428.1"
                     /translation="MSSSAVSTDATPQSDAGSSPGFVKAMSLTDATMLVAGSMIGSGI
                     FITSASIARGVPSPMWLVMAWVLSSVMTVLGALAYGELAAMYPKAGGQYVFLRESMGP
                     LMGFLYGWTFFAVIQTGTIAAVAVAFGKFLGVLVPGVSPAFFAWFPRAEVCVALLGCS
                     DPANAITLGLNPQRLVGLLSIAVLTWINLRGVREGKMVQTTLTVVKTGALALLIILGL
                     TLGRNATAISANFSAGQFSGDWTLSYTLVVAFGAAMVGSLFSSDAWNGVTFAAAEVKN
                     PSRNLPLALLIGTGLVCVLYIVANLAYLSVLPFDGVATGATVVERGIRHATEDRVATA
                     VVATIFGASAASIMAVAILISTFGCNNGLILSGSRVLYAMSRDGLFFKRAGTLNRNHV
                     PAFALVVQSVWTAFLCLSGTYNQLLNYVIFAALLFYVFTTAGLFILRAKRPDIVRPYR
                     AFGYPVLPLLYILLCCGVMVLLLLSPTTRTEAVSGLVLVLVGIPVFYLWRRAERPALA
                     DA"
     gene            2979..>3239
                     /locus_tag="VFN38_11480"
     CDS             2979..>3239
                     /locus_tag="VFN38_11480"
                     /inference="COORDINATES: protein motif:HMM:NF015019.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004427 - inorganic diphosphate
                     phosphatase activity [Evidence IEA];
                     GO_function: GO:0009678 - diphosphate hydrolysis-driven
                     proton transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proton-translocating pyrophosphatase"
                     /protein_id="HET9012429.1"
                     /translation="MTQTQSSLLTVVIGASTLALVFAVFLARWVLSRGRGTPEMQKIS
                     NAIQEGAEAYLARQYKTIGMLSIVVAALLGIGYGYFRHTTAND"
BASE COUNT          454 a         1178 c         1070 g          537 t
ORIGIN      
        1 tcccacgccg tcgctcgcgc cgccaggcgc gcagtcgaat cagatcgtgc tcgaggtgag
       61 tccggacgga tattcgatca actcggagaa ggtggacgag gcgaacctcg gccgccggct
      121 caaggagatc tacgatccgc gtcccgagaa gatcattttc gtgaagggcg acccgaaggt
      181 gaagtacgag aaggtggtgc acgcgatgga cgtgtcgcgc ggctcgggcg tgaaggtcat
      241 cggcgtgccg ccgaaggaca cccccggctc cggcaagtag cgccgaaccg gcgtcatccg
      301 gcaccctcgg gaccgtacgg cggacgaacc tttcgagggt cgtccgccgt ataacgttgc
      361 ggccctgatc gaacgcggcc gcgtcacgtt gcagcagaga gcgcatggcc tacctcgacg
      421 acagctacac gcacgatccg ccgccgcccc ccgcccgacc cacgtatcgc gtgccgatcg
      481 gcatgcccct gcgcgacgac gggcggcggg cgagcatgct cgtctcgatc gcggtgcacg
      541 cgatcatcat cggtctgctc atcgtcccct tcttcctgcc ggacaccgtc atcgcgcgga
      601 tcgagcaggg cgcggggggg cccggtccgg cgggcggcgg cgggggcgga cggcgcgggt
      661 ccggcggtac cgtggaatca ctgcgctacg tgcgtctcgc tcctgatccc gtgccgacgc
      721 ccacgacact gcccgcggtg acgccgccgc tgccgacgcc caagccggcg cctccgacgc
      781 cgacgccggt ggagccgacg ccggtgaaga cgccggagca gcagagcgcg gtgccggcgc
      841 cacagaccac cgtggcatcg gcgacgccgg gcgtcggcgg cggcagcggg aacgacgaca
      901 ccgccggcgc gggcccgggc agtggcggcg gggtgggctc gggcatcggc acggggaagg
      961 ggagcgcgtc cggtccgggc acggggggcg gcacccaggc gaactatccg ccgcagccga
     1021 tcgagttctt tctccccccg cttccggcac cccgggacgt gcgcggcttc aagttcaccg
     1081 cggagttcga cgtcgactcc acgggacgcg tgctcgacgt caagtacacc gagacgccca
     1141 acggcgacta caatcgacgc gtcttcgccg tgctccgcgc gatgcgcttt cgtcccggta
     1201 cccgccccga cggcacgccg ctgcgcatga aggcgcagct cggctacgag ttctagcgtc
     1261 ccgcgcacgc gtcgcgcagc gccgtgattc tcccggccgc gctctagcga tccccgcagc
     1321 gcatccctac attttgccag attaggacca aaaatcgccg ccggcgctcg ccgacgacgc
     1381 ccctcccgct tttaccgccc cctgcatgag cagctcggcc gtctcgaccg acgcaacgcc
     1441 gcagtccgac gccggttcca gcccggggtt cgtgaaggcg atgtccctca ccgacgcgac
     1501 gatgctcgtc gccgggtcga tgatcggatc cggaatcttc atcacctcgg cgagcatcgc
     1561 gcgcggcgtt ccgtcgccga tgtggctggt gatggcgtgg gtcctttcca gcgtgatgac
     1621 ggtgctgggc gcgctcgcct acggcgagct cgccgcgatg tatcccaagg cggggggaca
     1681 gtacgtcttc ctgcgcgagt ccatgggtcc gctcatgggc ttcctctatg gctggacctt
     1741 cttcgccgtc atccagacgg gcaccatcgc cgccgtcgcc gtggcgttcg gcaagttcct
     1801 tggcgtgctg gtgcccggcg tgagcccggc cttcttcgcc tggttcccgc gcgccgaagt
     1861 ctgtgtggcg ctgctcggct gctcggaccc cgccaacgcg atcacgctcg ggctcaaccc
     1921 gcagcggctc gtgggcctgc tcagcatcgc cgtgctcacg tggatcaacc tgcgcggcgt
     1981 gcgggaaggg aagatggtcc agaccacgct gaccgtcgtg aagacgggcg ccctggcgct
     2041 gctcatcatt ctcggcctca ccctcgggcg gaacgccacg gccatctcgg ccaacttcag
     2101 cgccggccag ttcagcggcg actggacgct gagctacacc ctcgtcgtcg ccttcggcgc
     2161 ggcgatggtg ggctcgctct tctcgagcga cgcctggaac ggcgtgacct tcgccgcggc
     2221 ggaggtgaag aacccgtcgc gcaacctgcc gctcgcgctg ctgatcggca cggggctggt
     2281 gtgcgtgctc tacatcgtcg ccaacctcgc gtatctcagc gtcctgccgt tcgacggcgt
     2341 ggcgacgggc gccacggtcg tggagcgcgg catccggcac gcgacggaag accgcgtcgc
     2401 caccgccgtc gtggcgacga tcttcggcgc gagcgccgcg tcgatcatgg cggtcgccat
     2461 cctcatctcc accttcggct gcaacaacgg gctcatcctg tccggctcgc gtgtgctgta
     2521 cgcgatgtcg cgcgacggcc tgttcttcaa gcgggcgggg acgctgaacc ggaaccacgt
     2581 gcccgcgttc gccctcgtcg tgcagtcggt gtggacggcg ttcctctgcc tcagcggcac
     2641 gtacaaccag ctcctcaact acgtcatctt cgccgcgctg ctgttctacg tcttcaccac
     2701 ggcgggcctg ttcatcctgc gcgcgaagcg tcccgacatc gtgcgtccct accgggcgtt
     2761 cgggtatccg gtgctgccgc tgctctacat cctgctctgc tgcggcgtga tggtgctcct
     2821 cctgctctcg ccgacgacgc gcacggaggc ggtgtccggc ctcgtgctcg tgctggtcgg
     2881 catcccggtg ttctacctgt ggcgccgcgc cgagcgccca gccctcgccg acgcctgacc
     2941 ggcgccggcg tcttccgcat tcccactttc cacgcatcat gacgcagacg cagtcatcac
     3001 tcctgaccgt cgtcatcggc gcgagcacgc tcgcgctggt cttcgccgtc ttcctcgcac
     3061 gctgggtgct ctcgcgcggc cgcggcacgc ccgagatgca gaagatctcc aacgccatcc
     3121 aggagggcgc ggaagcgtac ctcgcgcgcc agtacaagac gatcggcatg ctgtccatcg
     3181 tcgtcgcggc gcttctgggc atcggctacg gctacttccg ccacacgacg gcgaacgat
//
LOCUS       DASSYW010000720         4722 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1324636, whole genome shotgun sequence.
ACCESSION   DASSYW010000720 DASSYW010000000
VERSION     DASSYW010000720.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4722)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4722)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4722
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1324636"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(63..2000)
                     /locus_tag="VFN38_11485"
     CDS             complement(63..2000)
                     /locus_tag="VFN38_11485"
                     /inference="COORDINATES: protein motif:HMM:TIGR03436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HET9012430.1"
                     /translation="MPARRFGLLAGAVAITIAAAGAAQSPPANTLRVDLFAVRDGAAV
                     DDLRQDELQLLEDGVPQTIDSFERVAVAPGSPRSRVFVVFVDTHHTTIEDESSARLPL
                     VRVLDRLLDRDDLVALMTPELAAADLTFRRKGDVISDLMQADWSWARRGRRRAPGSKE
                     VLYDQCFDSSRAADRARGAEMKARWREETTLDALDDLVAHLGPLREERKTVLTISDGW
                     QLFTSSRTLGEPDDDKSSRSDRLRRFGDRGSVQGSPATPVMRVECEADRRRLATIDSS
                     QHLRDLTESANRANVSFYTLYAPEATVPPPGVSRAVPEVDHAAARTDSLRLLADGTDG
                     LAVLKRTAVDEALPRIVADASSYYLVTYRSSNTKLDGRFRTLSARVTRPGVRVRTRRG
                     YRGLTTDELLSTRRPAGAARSAIAAIPVAPADARRPFRIRTSSWAAPDGGTFWIVGEL
                     DYRTRQELEWTAGATADVVVLAADGTELLSQTLTVKPSDGAFAVRVPDRGAVMPGEYA
                     VQVQLRPDANDSVVLTDTARVVMIASKGDGLGTPVVWRRGPSTGPRHLQTADPRFSRS
                     ERIRLELATTVTGTAGARLLDRAGQPLQVPVQVSARPDDSGQFHWIVADAVLAPLAPG
                     QYAIEVTLGALKQTFELTLVP"
     gene            complement(2063..2653)
                     /locus_tag="VFN38_11490"
     CDS             complement(2063..2653)
                     /locus_tag="VFN38_11490"
                     /inference="COORDINATES: protein motif:HMM:NF024937.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4126 domain-containing protein"
                     /protein_id="HET9012431.1"
                     /translation="MALLGRTAAFSFAAGINLYATVAIIGLASRFHWVTLPRQFEIFD
                     SNLVIGAALVLYLVEFFADKVPYVDTMWDIVHTAIRPLGGAFVAVASVGEASPAAQGL
                     AAVLGGTLAAGSHFTKAGTRAAANTSPEPFSNWALSLGEDGLVVGLGLLALAYPVTAL
                     VITAVLVGLMAVFAAAIVRAVRRRFARRPVPLAHSS"
     gene            complement(2653..3405)
                     /locus_tag="VFN38_11495"
     CDS             complement(2653..3405)
                     /locus_tag="VFN38_11495"
                     /inference="COORDINATES: protein motif:HMM:TIGR00530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HET9012432.1"
                     /translation="MSGPFFVYATIVAAVRSVFTYVAIVLYILIIGPPGLLLTWLSRS
                     KRLLYALGHGGVGLALGLTGIRYRIVGRQNVPPGAVVYCSNHESNVDPAVLFQGLHPM
                     LHIFYKAELHKVPLMGTAFDIGGFVAVERADRHKAFASVDEAAESLRRGNSFLIFPEG
                     TRSRSGELLPFKKGGFIMALKAQVPIVPVAVSGGRASMRKGSAVVRPVKVTVRIGQPI
                     STEGLTIDDRDTLIERARTAVQGLLDQGSAWS"
     gene            complement(3448..4224)
                     /locus_tag="VFN38_11500"
     CDS             complement(3448..4224)
                     /locus_tag="VFN38_11500"
                     /inference="COORDINATES: protein motif:HMM:NF044704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CarD family transcriptional regulator"
                     /protein_id="HET9012433.1"
                     /translation="MTFQVGDKVIYPNHGLGIVERIEEKTILGTTCGFFHLRIVANDT
                     TVLVPVANVDGVGLRKAIDDAEVERLFTLIGDGKIDNHQNWKGRFKDNSDKMRTGSIY
                     DMADVLKSLTFLSKSKSLSFREKRMLDRAKALIISEVSEVMRLKALEVEEQVDRALEK
                     CFTTKVRNINRSQARAASAKVAAKPPVVAAPKAPVVNGAKPPVVAAAKPVVAPKPAVA
                     TAAKPVVATAKAVVSAKPVIAAKAVKAVPPLVARRAARAS"
     gene            complement(4507..>4722)
                     /locus_tag="VFN38_11505"
     CDS             complement(4507..>4722)
                     /locus_tag="VFN38_11505"
                     /inference="COORDINATES: protein motif:HMM:NF019121.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HET9012434.1"
                     /translation="QTATAAYQALELRDYGRVDMRLQPDGRVHVIEVNPNPWLSSKAE
                     FAMAARKAGRTYPQLVEEIVELAMARA"
BASE COUNT          765 a         1633 c         1617 g          707 t
ORIGIN      
        1 cttggggctg gagggcctaa ggccaacgag tcctaaggtc caaggccaaa ggtccaaggc
       61 cttcaaggaa caagagtcag ctcaaacgtc tgcttcagcg cgcccagcgt gacctcgatc
      121 gcgtactgcc ccggcgccag cggcgccagc accgcatcgg cgacgatcca gtggaactga
      181 ccggaatcat ccggtcgtgc gctcacctgc acgggcacct gcagcggctg ccccgcgcga
      241 tcgagcagac gcgcacccgc ggtcccggtc acggtcgtgg ccagctccag ccggatgcgc
      301 tcactgcgcg agaaccgcgg gtccgcggtc tggaggtgac gcgggccggt tgacggcccg
      361 cggcgccaca ccaccggcgt gcccaggccg tcgcctttcg acgcgatcat caccacgcgc
      421 gcggtgtcgg tgagcaccac gctgtcgttg gcgtccgggc gcagctgcac ctgcaccgcg
      481 tactcgccgg gcatcaccgc gccccggtcg ggcacgcgca cggcgaacgc gccgtcggac
      541 ggcttcacgg tgagcgtctg cgacagcagc tcggtgccat cggcggccag caccaccacg
      601 tccgccgtgg cgccggcggt ccactccagc tcctggcgcg ttcgatagtc cagctccccg
      661 acgatccaga aggtgccgcc gtccggcgcc gcccacgacg acgtgcggat gcggaacgga
      721 cgccgcgcgt cggccggcgc cacgggaatc gccgcgatgg cgctccgggc cgcgcccgcg
      781 gggcgacggg tgctgagcag ttcgtccgtc gtcaggccgc ggtagccgcg ccgcgtccgc
      841 acccggacac ccggccgggt gacgcgcgcg ctcagcgtcc ggaaacgccc atcgagcttg
      901 gtgttcgacg accggtaggt gaccaggtag taggacgacg cgtcggcgac gatgcgcggc
      961 agcgcctcgt ccaccgccgt gcgcttcagc accgccaggc cgtcggtgcc gtcggccagc
     1021 agccgcagac tgtccgtgcg cgcggcggcg tggtcgactt cgggcaccgc gcgcgacacg
     1081 ccgggcggcg gcacggtcgc ctccggcgcg tacagggtgt agaacgacac gttggcgcga
     1141 ttggccgact cggtgagatc acgcaggtgc tggctgctgt cgatcgtcgc gaggcgccgc
     1201 cgatcggcct cgcactccac gcgcatgacg ggcgtggccg gcgatccctg taccgatccc
     1261 cgatcgccga accggcgcag ccgatccgag cgcgagctct tgtcgtcgtc gggctcgccg
     1321 agggtgcggc tgctggtgaa cagctgccag ccgtcgctga tcgtcagcac ggtcttgcgc
     1381 tcctcgcgca gcgggcccag gtgcgccacg agatcgtcga gcgcgtcgag cgtcgtctcc
     1441 tcgcgccacc gcgccttcat ctcggcgccg cgcgcgcgat ccgccgcgcg ggacgagtcg
     1501 aagcactggt cgtagagcac ttccttcgac ccgggcgcgc gacggcgccc gcggcgggcc
     1561 cacgaccagt cggcctgcat gaggtccgag atcacgtcgc ccttgcgccg gaacgtgagg
     1621 tcggcggccg cgagctcggg cgtcatcagc gcgacgagat cgtcgcggtc gagcaggcgg
     1681 tcgagcacgc ggacgagcgg caggcgcgcc gacgactcgt cttcgatggt ggtgtggtgg
     1741 gtgtccacga acacgacgaa cacgcgggag cgcgggctgc cgggcgccac cgccacgcgt
     1801 tcgaacgaat cgatggtctg gggaacgccg tcctcgagca gttgcagctc gtcctgacgc
     1861 agatcgtcca ctgccgcccc gtcacggacc gcgaacaggt ccacgcggag cgtgttggca
     1921 ggcggcgatt gcgcggcgcc ggcagctgcg atcgtgatgg caacggcacc ggcgaggagg
     1981 ccgaaccttc gggcaggcat gcaccctcgg acgtgcagaa cgctggcccc acgagtctac
     2041 cgcaagccgc gggacaccga acctaggagc tgtgcgccag gggcacgggc cggcgggcaa
     2101 atctccggcg aaccgcccgg acgatcgccg cggcgaagac ggccatgagc cccacgagca
     2161 cggccgtaat gaccagcgcc gtgaccggat aggcgagcgc cagcagcccc aggccgacga
     2221 cgaggccgtc ttcccccagg ctgagcgccc agttcgagaa gggctcgggg ctggtgttgg
     2281 ccgccgcacg cgtgccggcc ttagtgaaat gactgcccgc agccaaggtg ccgcccagca
     2341 ccgccgccag cccctgggcc gcgggcgacg cctcgcccac gctcgccacc gcgacgaacg
     2401 caccgccgag cggacggatg gccgtgtgga cgatgtccca catggtgtcc acgtagggca
     2461 ccttgtcggc gaagaactcg acgagataga gcacgagcgc cgcgccgatc acgaggttgc
     2521 tgtcgaagat ctcgaactgc ctcggcagcg tcacccagtg gaagcgtgac gccagcccga
     2581 taatcgccac ggtggcgtac aggttgatgc ccgcggcaaa cgagaacgcc gcggtccggc
     2641 caagcagcgc catcagctcc atgcggagcc ctggtccagc agaccctgta ccgcggtgcg
     2701 ggcgcgctcg atcagcgtgt cgcggtcgtc gatggtgagg ccctcggtcg aaatcggctg
     2761 accgatccgg accgtcacct tcacgggccg cacgacggcg ctccccttcc gcatcgacgc
     2821 gcggccgccg ctcacggcca ccggcacgat cggcacctgt gccttgagcg ccatgatgaa
     2881 gccgcccttc ttgaacggca gcagctcgcc gctgcggctg cgggtcccct cgggaaagat
     2941 gaggaacgaa ttgccccggc gcagcgactc ggcggcctcg tccaccgagg caaacgcctt
     3001 gtgccggtcg gcgcgctcca ccgcgacgaa cccgccgatg tcgaacgccg ttcccatcag
     3061 cggcaccttg tggagctcgg ctttgtagaa gatgtgcagc atcggatgca atccctgaaa
     3121 cagcacggcc gggtccacgt tgctttcgtg gttagagcaa tagacgaccg ccccgggggg
     3181 aacgttctgg cgcccgacga tccggtagcg gatgccggtc aacccgaggg cgaggccgac
     3241 gccaccgtgg cccagcgcat agaggagccg cttcgagcgc gagagccacg tgagcagcag
     3301 tcccggcggt ccgatgatca ggatgtagag gacgatggcg acgtaggtga aaacggaacg
     3361 aacggccgcc acaatggttg cgtacacgaa aaagggcccg gacatctctg tccgggccct
     3421 gagcatagca aacggccggg gtggcggcta ggacgcgcgg gcggcgcgac gcgccacgag
     3481 cggcggaacg gccttcacgg ccttggccgc gatgaccggc ttcgcgctca ccaccgcctt
     3541 ggcggtcgcg accacgggct tggcagcggt cgccaccgcg ggcttgggag ccacaaccgg
     3601 tttggcggcg gccacgaccg gcggcttcgc tccgttgaca acaggcgcct tcggcgcggc
     3661 cacgacgggc ggcttggcgg ccaccttggc gctcgcggcg cgggcctgac tccggttgat
     3721 gttgcgcacc ttcgtggtga agcacttctc gagcgcgcga tcgacctgct cctcgacctc
     3781 gagcgccttc agccgcatga cctccgatac ttcggagatg atcagcgcct tggcgcgatc
     3841 gagcatccgc ttctcgcgga acgacaggct cttcgacttg ctgaggaacg tcaggctctt
     3901 gaggacgtcg gccatgtcgt agatcgaccc agtcctcatc ttgtcggagt tgtccttgaa
     3961 gcggcccttc cagttctgat ggttgtcgat cttgccgtca ccaatcagcg tgaagagacg
     4021 ttccacttcg gcgtcgtcga tggccttgcg caggccgacg ccatccacgt tcgcgactgg
     4081 caccagcacc gtggtgtcgt tcgcgacgat ccgcaggtgg aagaacccgc aggtcgtgcc
     4141 gagaatcgtc ttttcttcaa ttcgttcaac gatgccgagc ccgtggttcg ggtaaatgac
     4201 cttgtctccg acctggaatg tcacgtgtcc ctcgttccgg taggttgtgg ttggaccggt
     4261 ttgtgactgg agcagcccac tgagtatagc gcattcgcgg gcggctcgac aacgtgaaaa
     4321 cgtcgaaaat ggccgtgttt tggccggttt ttgtcagctc ttccggatgc ccaaaccgcc
     4381 gcggacaccg cgcggagcga ccttcggcaa gggccttaaa tatcacgcac gacacgactt
     4441 gaaagtcgcg ctccagggag aatcgagtgg cccgatccgg gggggccggg agtctcccgg
     4501 gaaggatcag gcccgggcca tggcgagctc gacgatctct tccacgagct gtgggtaggt
     4561 ccgtccggcc ttacgggccg ccatcgcaaa ctcagccttt gagctgagcc acggattcgg
     4621 gttgacctcg atcacatgga cccggccatc gggctgcagc cgcatgtcca cgcggccgta
     4681 atccctcaat tcgagggcct ggtaggcggc cgtggcggtc tg
//
LOCUS       DASSYW010000721         2530 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_794708, whole genome shotgun sequence.
ACCESSION   DASSYW010000721 DASSYW010000000
VERSION     DASSYW010000721.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2530)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2530)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2530
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_794708"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..609)
                     /locus_tag="VFN38_11510"
     CDS             complement(<1..609)
                     /locus_tag="VFN38_11510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008641 - ubiquitin-like modifier
                     activating enzyme activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquitin-like small modifier protein 1"
                     /protein_id="HET9012435.1"
                     /translation="MAHRVLIPTPLRPYTGQKDAVDVDGATVGEVLKSLTSSYADLKK
                     HLYADDGKLRHFVNVYVNDDDIRYLERDATKLKDGDVISIVPSVAGGAPVTSPPQEKS
                     AELSNAEIQRYSRHLILPEVGLDGQKKLKAGSVLCIGAGGLGSPAALYLAAAGVGTIG
                     IVDFDAVDESNLQRQILHGTPDVGRSKLASAKDRLTALNPEVR"
     gene            complement(591..1079)
                     /locus_tag="VFN38_11515"
     CDS             complement(591..1079)
                     /locus_tag="VFN38_11515"
                     /inference="COORDINATES: protein motif:HMM:NF025819.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M67 family metallopeptidase"
                     /protein_id="HET9012436.1"
                     /translation="MTMGTDSVRRDPDSSVSAIHRERRVTTLSADAVATIRRHGAETF
                     PYECCGALIEAGGVIVEAYAMENTTSSGAARRFRIGPDQYRQADRRARERGGSLVGFY
                     HSHPNEPARPSAYDLEHAWPNLTYVIISVRAGVPADITVWHLRDDRSGYDEGEVRWPT
                     GS"
     gene            complement(1048..2004)
                     /locus_tag="VFN38_11520"
     CDS             complement(1048..2004)
                     /locus_tag="VFN38_11520"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase family protein"
                     /protein_id="HET9012437.1"
                     /translation="MSIPALSPVSVLDTIGRTPLLRLRRLAAANAGVEIYAKAEFQNP
                     GGSVKDRAASAIVREAELSGRLRPGATILDATSGNTGIAFAMIAAARGYRLKLCVPGN
                     VTPERLRTLRAYGADVVITNPMEGSDGAIRAARRLNAEHPERYFYADQYNNDANWRAH
                     YETTAVEILEQTDGRITHFVAGLGTSGTFVGTGRRLRDFSRDIKLFSVQPESPLHAIE
                     GLKHMETAIRPGIYDESLADEDLRVSTERAHSLTRRLAAEEGLLVGVSSGAALAAALD
                     VAARIREGVIVTIFPDSGTRYLTENFWQGAPDDDDGHRQRPA"
     gene            complement(2010..>2530)
                     /locus_tag="VFN38_11525"
     CDS             complement(2010..>2530)
                     /locus_tag="VFN38_11525"
                     /inference="COORDINATES: protein motif:HMM:NF013259.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012438.1"
                     /translation="GAESCRLAVTQSRGLGRQLGDTLRARPDLVAAAPDLVIKISGCP
                     NGCGQHHIAGIGFQGSLKKIGGQPVPQYFVMVGGGSGDGVTTFGRLAAKVPARRAVDA
                     LERLVGMFQEQRAADESPLAFFRRVDVAAVKTKLADLEQITPETAKPEDYIDLAEVSA
                     FNPEVMDGECSA"
BASE COUNT          363 a          854 c          895 g          418 t
ORIGIN      
        1 gcgcacttcg ggattgagcg ccgtcaggcg gtccttcgcc gacgccagct tcgagcggcc
       61 cacgtccggc gtgccgtgca ggatctggcg ctgcaggttg ctctcgtcga ccgcgtcgaa
      121 atcgacgatg ccgatcgtgc cgacgccggc ggcggcaagg tacagggccg caggcgatcc
      181 gagaccgccg gcgccgatgc acaggacgct gccggccttg agcttcttct gcccgtcgag
      241 cccgacttcc ggaaggatga gatgccggct gtagcgctgg atctcggcgt tcgacaactc
      301 ggcgctcttc tcctgcggcg ggctggtcac cggcgcgccg ccggccaccg acggcacgat
      361 gctgatgacg tcgccgtcct tcagcttcgt cgcatcccgc tcgagatagc ggatgtcgtc
      421 gtcgttcacg tacacgttca cgaagtggcg cagcttgccg tcgtcggcgt agagatgctt
      481 cttcagatcg gcgtagctcg acgtcagcga tttcagcacc tcaccaaccg tcgcgccgtc
      541 gacgtcgacg gcgtccttct gtcccgtgta cgggcgcagc ggcgtcggaa tcaggacccg
      601 gtgggccatc tcacctctcc ctcgtcatat ccggaccggt cgtcgcgcag gtgccacaca
      661 gtgatgtcgg cgggcacgcc ggcgcgaaca gaaatgatga catatgtcag gttgggccag
      721 gcgtgctcga ggtcgtacgc cgacgggcgc gccggctcgt tcggatgcga atgatagaag
      781 ccgacgagcg atccgccgcg ctcgcgcgcg cgccggtccg cctggcgata ctggtcgggc
      841 ccgatgcgga agcggcgcgc cgcgccgctg ctcgtggtgt tctccatcgc gtacgcctcg
      901 acgatgacgc cgccggcttc gatgagcgcg ccgcaacact cgtaaggaaa cgtctcggcg
      961 ccgtggcggc ggatcgtcgc gaccgcgtcg gcgctgaggg tcgtgacgcg gcgttcgcgg
     1021 tgaatcgccg agacggacga atccggatca cgccggacgc tgtcggtgcc catcgtcatc
     1081 gtcgggagct ccctgccaga agttttccgt gaggtaacgc gtgccgctgt ccgggaagat
     1141 cgtgacgatc acgccttcgc ggatgcgcgc ggcgacgtcg agcgcggcgg ccagggcggc
     1201 gccgctcgat acgccgacga ggagcccctc ttccgcggcc aggcggcgcg tcaggctgtg
     1261 cgcgcgctca gtcgacacgc gcaggtcttc gtcggcgagc gactcgtcgt agatgcccgg
     1321 acgaatcgcg gtctccatgt gcttcagccc ttcgatcgcg tgcagcggcg attccggctg
     1381 caccgagaac agcttgatgt cgcggctgaa atcgcgcagc cggcgcccgg taccgacgaa
     1441 cgtgccgctg gtgccgaggc cggcgacgaa gtgcgtgatg cgcccgtcgg tctgctcgag
     1501 gatctcgacc gccgtcgtct cgtagtgcgc gcgccagttg gcgtcgttgt tgtactgatc
     1561 ggcgtagaag tagcgctcgg ggtgctcggc gttcaaccgc cgcgccgcgc gaatcgcgcc
     1621 atcgctgcct tccatcgggt tggtgatgac gacgtcggcg ccgtaggcgc gcagagtacg
     1681 gaggcgctcc ggcgtgacgt tgcccggcac gcacaacttc agccggtagc cgcgggccgc
     1741 ggcgatcatg gcgaaggcga tgccggtgtt gccggaggtg gcgtcgagaa tcgttgcgcc
     1801 aggacgcagc cgtccgctca gttccgcctc gcggacgatc gccgatgccg cacggtcctt
     1861 gaccgaaccg ccggggttct ggaattccgc cttggcgtag atctcgacgc cggcgttggc
     1921 ggcggcgagg cgccgcagcc gcaacagcgg cgtacggccg atcgtgtcga gcaccgagac
     1981 cggcgagagc gctgggatcg acataagcgt tacgcgctgc actccccgtc catcacttcg
     2041 gggttgaaag cgctgacctc cgcgagatcg atgtagtcct ccggcttcgc ggtctccggc
     2101 gtgatctgct ccagatccgc cagcttcgtc ttgaccgcgg cgacgtcgac gcggcggaag
     2161 aatgcgagcg gcgactcgtc ggcggcgcgc tgctcctgaa acatgccgac gagccgctcg
     2221 agggcgtcca cggcgcgtcg cgccggcacc ttcgcggcga gccgcccgaa ggtcgtcacg
     2281 ccgtcgccgg agccgccgcc gaccatcacg aagtactgcg gcaccggctg gccgccgatc
     2341 ttcttgaggc ttccctggaa gccgatgccg gcgatgtgat gctgaccgca gccgttcggg
     2401 cagccgctga tcttgatgac gaggtcgggg gcggcggcca cgagatcggg ccgcgcgcgg
     2461 agggtgtcgc cgagctggcg gcccaggccg cgcgactggg tgacggccag gcggcaggac
     2521 tccgcgcccg
//
LOCUS       DASSYW010000722         2129 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_299256, whole genome shotgun sequence.
ACCESSION   DASSYW010000722 DASSYW010000000
VERSION     DASSYW010000722.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2129)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2129)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2129
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_299256"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..956)
                     /locus_tag="VFN38_11530"
     CDS             complement(<1..956)
                     /locus_tag="VFN38_11530"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HET9012439.1"
                     /translation="MGSLATAAATFLSSPRQMLIGAEWRDALSGQRLDVRDPATGEVV
                     TTVPAANAADVDLAVKAARAAFEGREWGAARPVDRERWLLKLADLLDAHAAEFAEIET
                     VDNGKPLVISQRVDVPSAVDFLRYCAGWATKVEGTTVEPSLTGFRKNEFFAYTRREPV
                     GVVGAIIPWNFPLLMAVWKIGPALATGCAVVLKPAEDTPLSALRLAELVLGAGFPPGA
                     LNVITGDGPTAGAALAAHPGIDKVAFTGSTAVGKRIGQAALENMSRLSLELGGKSPVI
                     VLDDVDPAVAASGAANAIFFNSGQVCVAGSRLYVQRKAYDAVL"
     gene            1072..1590
                     /locus_tag="VFN38_11535"
     CDS             1072..1590
                     /locus_tag="VFN38_11535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012440.1"
                     /translation="MGLRSSVAVVALVAFAATTAPAGQRPAAPPKLPEHLVGVWQLNA
                     AKSRYFPGPGPIMETRTYIREGEDVVGIIQRTFQDGRRERIEYTANFDREYPVMGTDD
                     YDHVTLKRIDEYTSEAVLSHAGRVYGTARRVIANDNKSMTITFRRQNETGPSVYNVVY
                     YDRIALKPGEPQ"
     gene            1587..>2129
                     /locus_tag="VFN38_11540"
     CDS             1587..>2129
                     /locus_tag="VFN38_11540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012441.1"
                     /translation="MRRTWPQAFRPAICAALVLLFAPSASPQWLSYPTPGTPRLADGK
                     PNLFAPVPRAAGGRPDLTGVWEVLGDLVMPTDGRVRSKYVYNIGVDLPGGHAPFQPWA
                     QTLWDTRQKALGVGAPSEKCLPHGIPDAMLTRTLPFKMVQTAGVTIILFEEFNNWRQV
                     FTDGRLLPVDPEPAWLGYSVG"
BASE COUNT          326 a          774 c          720 g          309 t
ORIGIN      
        1 agcaccgcgt cgtacgcctt gcgctgcacg tagagccgcg atcccgccac acacacctga
       61 cccgagttga agaagatcgc gttggcggca ccgctcgcgg ccaccgcggg atcgacgtcg
      121 tcgaggacga tcacgggcga cttgccgccg agctcgagcg agaggcgcga catgttctcg
      181 agtgcggcct ggccgatgcg cttgccgacg gccgtcgagc cggtgaacgc caccttgtcg
      241 atgccggggt gcgccgcgag cgcggcgccg gccgtggggc cgtcgccggt gatgacgttg
      301 agcgcgcccg gcggaaatcc ggccccgagc accagttcgg cgagccgcag cgcgctcagc
      361 ggcgtgtcct cggccggctt gagcacgacg gcgcacccgg tggcgagcgc cggcccgatc
      421 ttccacaccg ccatcagcag cgggaagttc cacgggatga tcgcgcccac gacgccgacc
      481 ggctcgcgac gggtgtacgc gaagaactcg ttcttgcgga acccggtcaa cgacggttcc
      541 actgtggtgc cctcgacctt cgtggcccag ccggcgcagt agcgcaggaa gtccaccgcc
      601 gagggcacgt cgacgcgttg cgagatgacg agcggcttgc cgttgtccac cgtctcgatc
      661 tcggcgaact cagccgcgtg ggcgtccagc aggtccgcca gcttcagcag ccagcgttcg
      721 cgatcgactg ggcgggccgc gccccactcg cgcccctcga acgccgcgcg ggcagccttg
      781 acggccagat ccacgtcggc cgcgttcgcc gccggcaccg tggtcaccac ttcaccggtg
      841 gctgggtcgc gcacatcgag ccgctgcccc gacagtgcgt cgcgccactc ggcgccgatc
      901 agcatctgac gcggactcga caggaacgtg gcggcggcgg tggcgagtga acccatccgc
      961 ccagtctact gcctgcgcct cgacaggact ttgcacccat ccgccgggcc gggacgcgct
     1021 agcatacgcg ctacgttggg cgcgtcatcg cgtgcccctg ggagggtcgt catgggcctc
     1081 cgttcgagtg tcgccgtcgt cgcgctcgtc gcattcgcgg ccactaccgc gccggcaggg
     1141 caacggccag ccgctccgcc gaagctgccg gagcacctgg ttggcgtctg gcagctcaac
     1201 gccgcgaagt cccgctattt ccccggcccg gggcccatca tggagacgcg cacctacatc
     1261 cgcgaagggg aggacgtggt cggcatcatc cagcgcacgt tccaggacgg gcgccgcgag
     1321 cggatcgagt acaccgccaa cttcgatcgc gagtatcccg tgatgggtac cgacgactac
     1381 gaccacgtga cgctgaagcg catcgacgag tacacgtccg aggccgtgct gtcgcacgcc
     1441 gggcgcgtct acggcaccgc ccgacgcgtc atcgcgaacg acaacaagtc gatgacgatc
     1501 accttccggc gccagaacga aacgggacca tcggtctaca acgtcgtcta ctacgaccgc
     1561 attgccctga agcctggcga gccgcagtga ggcgcacgtg gccgcaggcc ttcaggcctg
     1621 ccatctgcgc cgcgctcgtc ctgctcttcg caccctcggc gtcgccgcag tggctctcgt
     1681 atccaacgcc cggcacgccg cggctcgccg acggcaagcc gaacctgttc gcgccggtgc
     1741 cgcgcgcggc cggcggccgg ccggatctga ccggcgtgtg ggaggtgctc ggcgacctcg
     1801 tgatgccgac cgacggacgc gtccgttcga agtacgtcta caacatcggc gtcgatctgc
     1861 ccggcggcca cgcgccgttc cagccgtggg cgcagacgct gtgggacacg cggcagaagg
     1921 ccctcggcgt cggcgccccg agcgagaagt gcctgccgca cggcatcccc gacgcgatgc
     1981 tcacgcggac gctgccgttc aagatggtgc agaccgccgg cgtcaccatc atcctgttcg
     2041 aggagttcaa caactggcgg caggtgttca ccgacggccg gctgctgccg gtggatcccg
     2101 agccggcgtg gctcggctac tcggtgggg
//
LOCUS       DASSYW010000723         2343 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1686030, whole genome shotgun sequence.
ACCESSION   DASSYW010000723 DASSYW010000000
VERSION     DASSYW010000723.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2343)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2343)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2343
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1686030"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..857)
                     /locus_tag="VFN38_11545"
     CDS             complement(<1..857)
                     /locus_tag="VFN38_11545"
                     /inference="COORDINATES: protein motif:HMM:NF013595.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012442.1"
                     /translation="MTALGIVAIAVGATQAQQRRVPVFEADASWPKLPNNWVLGQTPG
                     IAVDRRDHVYLLHRPRTVPEELRSRAAPAVIEFDEKGAFVTAWGGPGNGFDWPDSEHG
                     IFVDGKDNVWIGGSSPTSQSLTRRSDDMLLKFTRQGKFLLQIGGPDKSKGNADTSAVN
                     KPADAFVFAKTNEVFVADGYGNRRVIVFDAEKGTFKRMWGGSGLAPQDAPAPAAGAGG
                     AGRAAGGAPAAPARDCGPLLARETPAPEAFGGPVHSVKVSNDGLVYVADRANRRVQVF
                     TTDGKYQTQT"
     gene            complement(886..1953)
                     /locus_tag="VFN38_11550"
     CDS             complement(886..1953)
                     /locus_tag="VFN38_11550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012443.1"
                     /translation="MRKTAIWAVLVVVCGSIGLAQAPAGGGGRQGGEGGTTILERAPK
                     DHSIAIPKDKLAGYLKDMDAKKLQTLRMIEGGKYNVNIRRITAAETGLVHPITADLWV
                     VLEGGGTLTTGGVLEKGKILGGQSRPIKVGDVVYIPSGLPHGVSGVNNNITWLNVRWD
                     TDWPPDSPMGAGTLNGILGRTGGPRAGGPREGSVDARAARAGAAGAPAAAPPAARGPA
                     LPPGSQQTLPYSYGGSGELFFSKETLDQIMAGMRLKKSGNTRLIEGGRYNVNLRWNGT
                     PSVEKHEQTIDTWVVLAGGATVSTGYEVKEGQRVPGTGVSVATKPGDVFFHPSNFYHG
                     FSEVTPDIFWLNIRWDDNYAK"
     gene            2084..>2343
                     /locus_tag="VFN38_11555"
     CDS             2084..>2343
                     /locus_tag="VFN38_11555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012444.1"
                     /translation="MTKSSYAAVLLALLCAACSSGQAAPRAQEITLLSGIAAGFTTDL
                     VKRFNKGLPQTHITLQSSSGGVAVVSSVDKGEGQLGLAQSDVT"
BASE COUNT          329 a          875 c          732 g          407 t
ORIGIN      
        1 gtctgcgtct gatacttgcc gtcggtcgtg aacacctgca cgcggcggtt cgcgcggtcg
       61 gccacgtaga cgaggccgtc gttcgacacc ttcacgctgt gcaccggtcc gccgaaggcc
      121 tcaggcgccg gcgtttcacg cgcgagcagc ggtccgcagt cacgcgcggg cgccgcggga
      181 gccccgccag ccgcgcgccc tgcgccaccc gcacccgcgg cgggcgccgg cgcatcctgg
      241 ggcgccaagc ccgaaccgcc ccacatgcgc ttgaacgtgc ccttctccgc gtcgaacacg
      301 atgacgcgac ggttgccgta gccgtcagcg acgaagactt cgttcgtctt cgcgaagacg
      361 aatgcatccg ccggcttgtt gaccgcgctc gtgtcggcgt tccccttgct cttgtccggc
      421 ccgccgatct gcagcaggaa cttcccctgc cgcgtgaact tcagcagcat gtcgtccgag
      481 cgccgcgtca gcgactgcga cgtggggctg ctgccgccaa tccacacgtt gtccttgccg
      541 tccacgaaaa tgccgtgttc gctgtccggc cagtcgaagc cgttgcccgg cccgccccac
      601 gccgtgacga acgcgccctt ctcgtcgaac tcgatcaccg ccggcgcggc gcggctgcgc
      661 agctcctcgg gcaccgtgcg cgggcggtgc agcagataca cgtggtcgcg ccgatccacc
      721 gcgatgcccg gcgtctgccc cagcacccag ttgttcggga gcttcggcca gctcgcgtcc
      781 gcctcgaata ccggcacgcg ccgctgctgc gcctgcgtcg cccctacggc gatcgcgaca
      841 attcccaggg ccgtcaaggc ccaagggcta aggccaaagg ccgtcttatt tcgcatagtt
      901 gtcgtcccag cggatgttca gccagaagat gtcgggcgtg acctcgctga agccgtggta
      961 gaagttcgac gggtggaaga acacgtcgcc cggcttcgtc gcgactgaca cgccggtacc
     1021 gggcacgcgc tgcccctctt tcacctcgta gccggtgctc accgtcgcgc cgcccgccag
     1081 caccacccac gtgtcgatcg tctgctcgtg cttctccact gacggcgtgc cgttccaccg
     1141 caggttcacg ttgtagcggc cgccttcgat cagccgcgtg ttgcccgact tcttcagccg
     1201 catgccggcc atgatctggt cgagcgtctc cttcgagaag aacagctcgc cgctgccgcc
     1261 gtagctgtac ggcagcgtct gctgactgcc gggcggcaac gcgggaccac gagcggcagg
     1321 cggcgcggcc gcgggagccc ccgcggcgcc cgcgcgcgcc gcacgcgcgt ccaccgagcc
     1381 ttcacgcggc ccgcccgccc gcgggccacc ggtccggccc aggatgccgt tcagcgtgcc
     1441 ggcgcccatc ggcgagtccg gcggccagtc cgtgtcccag cggacgttca gccatgtgat
     1501 gttgttattg actccgctta cgccgtgcgg cagccccgag gggatgtaga ccacgtcgcc
     1561 gaccttgatc ggccggctct ggccgcccag gatctttccc ttctcgagca caccgcccgt
     1621 cgtcagggtg ccgccgccct cgagcaccac ccacaggtcc gcggtgatcg gatgcacgag
     1681 ccccgtctcg gccgcggtga tgcggcggat gttcacgttg tatttcccgc cttcgatcat
     1741 gcgaagcgtc tggagcttct tcgcatccat gtccttgagg tagcccgcca gcttgtcctt
     1801 gggaatggcg atcgaatggt ctttgggcgc gcgctccagg atggtcgtcc cgccttcgcc
     1861 cccctgccgc cccccgcctc cggccggtgc ctgcgcgaga ccgatcgacc cgcacaccac
     1921 gaccaacacc gcccagatcg ccgttttccg catcaatacc ctccgcagcg gggcgaatta
     1981 tccgtggcag cgccaggggc tgcagccgcc ccatttgtca tcaattgtca tcaccctctg
     2041 ggggtccggt atgatccggc gtcgctcgcg ggaaagaggt taggtgacca agtcgtcata
     2101 cgcggcagtc cttctggctc tactctgcgc cgcctgctcg tccgggcaag cggcgccgcg
     2161 cgcgcaggag atcacgctcc tgtccggcat cgccgcaggg ttcacgaccg acctggtcaa
     2221 gcgcttcaac aaagggctcc cgcagacgca catcacgttg cagtcgtcgt ccggtggcgt
     2281 cgccgtcgtg tcgtcggtcg acaaaggtga aggccagctc gggctggcgc agtccgacgt
     2341 gac
//
LOCUS       DASSYW010000724         2050 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_854000, whole genome shotgun sequence.
ACCESSION   DASSYW010000724 DASSYW010000000
VERSION     DASSYW010000724.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2050)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2050)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2050
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_854000"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1027)
                     /locus_tag="VFN38_11560"
     CDS             complement(<1..1027)
                     /locus_tag="VFN38_11560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012445.1"
                     /translation="MTQRIMSRSWSLGLAVAATASLTACSLDVTNPNAATQTSVLTTP
                     AGLRTLGVGLQGRLGNFIGPSVTLTGIVAGELGNTDASLSTTREFQKYPNASANSAAI
                     DPTNSDLLNFWSTGFQVVRAANDILNNVDGVSLAAGTKSGLSALAKTAKAYAYGQMIE
                     AWPQLPLDLTKVPPGYNPRTEVLAQTLTLLASARTDISTTPVSSEFTTSVLQGSIDLL
                     NTIRALQARYSLAAGDYNGALTFANEVPGTATSRYTYSSVDQNPIWGSAISNGYFKAI
                     ATFRTDAEAGDTRVNKYTQSTVTTPFGGAQVVPLNVYLTSSEPYPLFSQDELSLIRAE
                     AYARTNQL"
     gene            complement(1042..>2050)
                     /locus_tag="VFN38_11565"
     CDS             complement(1042..>2050)
                     /locus_tag="VFN38_11565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012446.1"
                     /translation="KPERQKELELGADVEFLDGRAGVEATYYDKKVTDLVLPRTVLPS
                     TGFLDQLANVGELQNKGLELLARAVPVQRTGLSWTVTGTLTTSDPKVTKLSDGGAFFI
                     PGSFNIVRVATDGGDGSAPGHFYGTTYVRNGQGQILGFIAATSTSARQDSVPIIDASG
                     NVVAVPYIGTRKVIGNPNAHAFYSITNELSLGTRWNLRAQVDGVSGVDIFNFDRRLLE
                     TPAFGTGAAYAAEILKQVPSGYFQARRSIFEEYVEDGSYAKLREISVSYQLDPRWLRM
                     RGITGATLTLAGRNLKTWTDYTGWDPETNAGAQSTLVRGFAFATTPIPRTVTFAAALT
                     F"
BASE COUNT          295 a          643 c          751 g          361 t
ORIGIN      
        1 gcagctgatt ggttcgcgca tacgcttcgg cgcggatcag cgacagctcg tcctgcgaga
       61 agagcgggta tggttcgctg gaggtgaggt acacgttgag cggcaccacc tgcgcgccgc
      121 cgaacggcgt cgtcaccgtg ctctgggtgt acttgttgac gcgcgtgtcc cccgcctcgg
      181 cgtcggtgcg gaaggtcgcg atcgccttga agtagccgtt cgagatcgcc gacccccaga
      241 tcgggttctg gtcgacgctc gagtaggtgt agcgggacgt cgccgtcccc ggcacttcgt
      301 tggcgaaggt aagcgcgccg ttgtagtcgc ctgccgcgag ggagtagcgc gcctggaggg
      361 cgcggatcgt gttgagcagg tcgatgctgc cctggagcac gctggtcgtg aactcgctgg
      421 acaccggcgt ggtggaaata tcggtgcgcg ccgacgccag cagcgtgagc gtctgcgcca
      481 gcacctcggt gcgcgggttg tagcccggcg gcaccttggt gaggtcgagc ggcagctgcg
      541 gccacgcctc gatcatctgc ccgtaggcgt acgccttcgc cgtcttcgcc agcgcggaga
      601 ggccgctctt cgtgcccgcc gcgagcgaca cgccgtccac gttgttcagg atgtcgttcg
      661 ccgcgcgcac gacctggaat cccgtcgacc agaagttgag caggtcggag ttcgtggggt
      721 cgatcgccgc cgagttggcg ctggcgttcg ggtacttctg gaactcgcgc gtcgtggaga
      781 gcgacgcgtc ggtgttgccg agctccccgg ccacgatccc cgtgagcgtg acggaggggc
      841 cgatgaagtt gccgagccgt ccctggagtc cgacacccag ggtgcggagg ccggccgggg
      901 tggtgagcac ggatgtctgc gtcgccgcgt tgggattggt gacgtcgagc gagcaggcgg
      961 tgagtgaagc agtggccgcg acggcgagcc cgaggctcca gctccgcgac atgatgcgct
     1021 gtgtcatgga tgaggcctcg atcagaaggt gagcgcggcg gcgaacgtca ccgtgcgcgg
     1081 aatcggcgtg gtggcgaagg cgaagccgcg cacgagcgtg ctctgcgcgc cggcgttcgt
     1141 ctccggatcc cacccggtgt agtccgtcca ggtcttcaaa ttgcggccgg cgagggtgag
     1201 ggtggcgccg gtgatgccgc gcatgcgcag ccagcgcgga tcgagctgat agctcaccga
     1261 gatctcgcgc agcttggcgt acgagccgtc ctccacgtac tcctcgaaga tcgagcggcg
     1321 cgcctggaag tacccgctcg gcacctgctt caggatctcc gcggcgtatg cggcgccggt
     1381 gccgaaggcg ggcgtctcga gcaggcgacg gtcgaagttg aagatgtcca cgccgctcac
     1441 gccgtccacc tgcgcgcgca ggttccagcg cgtgccgagc gacagctcgt tggtgatgga
     1501 gtagaaggca tgggcgttgg ggttgccgat caccttgcgc gtgccgatgt agggcaccgc
     1561 cacgacgttc ccgctggcgt cgatgatcgg cacgctgtcc tgtcgcgcgc tggtgctcgt
     1621 ggcggcgatg aagccgagga tctgaccctg gccgttgcgc acgtaggtcg tgccgtagaa
     1681 gtggcccggc gcgctgccgt cgccgccgtc ggtggccacg cgcacgatgt tgaagctgcc
     1741 ggggatgaag aaggcgccgc cgtcggagag cttcgtcacc ttcggatcgc tcgtcgtgag
     1801 cgtgccggtg accgtccacg acaagccggt gcgctgcacc ggcacggcgc gcgcgagcag
     1861 ctcgagcccc ttgttctgca gctcacccac gttcgcgagc tggtcgagga atcccgtcga
     1921 tggaaggacg gttctgggca gtaccagatc agtgaccttc ttgtcgtagt acgtcgcctc
     1981 gacaccggcg cggccgtcga ggaactccac gtcggcgccg agctccagct ccttctgccg
     2041 ctcgggcttg
//
LOCUS       DASSYW010000725         5900 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1062524, whole genome shotgun sequence.
ACCESSION   DASSYW010000725 DASSYW010000000
VERSION     DASSYW010000725.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 5900)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5900)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5900
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1062524"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1053
                     /locus_tag="VFN38_11570"
     CDS             <1..1053
                     /locus_tag="VFN38_11570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012447.1"
                     /translation="GTWPVFYYTPLQRARFLADSVSGRLKTFFGDSANRDLRVARTLA
                     YAGSSYDLLAEILCEIPIDGSAPHTPEEIVRDFAVPRLNEAISIATAARAATTNANAQ
                     AAADSIINFARVTAGRALLYINDKAAARAFAIQVPAGFVFRAYYSSQNTRENNPFYEA
                     AVSSPWVSLEPEYKRLNDPRVPMQTLPQGAQSIAQGNQDTVTVGTTRTIGVFVPNSPI
                     MFSTFNNTVTGADFARDGYINIATGLEAQHIVAEADGPTASTLAFVNARRAAGQQGPF
                     AGTDLMAELREQRRRDLFLDGHRLGDMRRYLKYLQIDEFPRGAYPGSSSGETYNDATC
                     FPLPLAEIAGNPNVPR"
     gene            1282..4344
                     /locus_tag="VFN38_11575"
     CDS             1282..4344
                     /locus_tag="VFN38_11575"
                     /inference="COORDINATES: protein motif:HMM:TIGR04056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0071702 - organic substance transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SusC/RagA family TonB-linked outer membrane
                     protein"
                     /protein_id="HET9012448.1"
                     /translation="MHLTRLLGRAALLALGYAASGAAAPLIAQQPYAIRGRVVEATSQ
                     RPLASASVVLLGTRIGAMTDPEGRFTIRGTIAPGTQQLQVSHLGHSRLVRTVTLGADR
                     DVDVGTITMQTAAIQLNEVVVTGTGTPTERRKLGSTITSVQGDEVNNSPSAQSVDKAL
                     QGKVVGAVISQNNGQPGGGVSIRLRGTGSILGGAEPLIVVDGVIVENNSEALVSLGAN
                     ASRGGAALSNSLSDIAPGDIDHIEVVKGAAAAALYGSRANNGVIQIFTKRGSAGATTV
                     NYRTEFATGEAPKRYALDASPTAGRGDVLYGGASALGAPVTRYDYQDQIFQRASNVTN
                     QLSVSGGGEATTFYASALWQNEKGIMRSTGLNNVNARSSLTQKLSDKLSFTVNGSYIQ
                     RRTNFVPEGEQTQGVITTLIFTPTTFNPAYDATLGRYPYSPILGTNPLDVIDNWKAQD
                     NVDRFIGGLSTNWNPLANVTVNYLFGFDHNNESFYYYQPPRSGSASFTGSIQNPTRAI
                     QRFNNDLTVTHEGGLSPALQATTTLGFRHTSDRSDEVRAAALGLSPGQTTVGSGGATP
                     SSSQGIVELRTIGGFVQERLGFNERLFVTGGLNYEASSAFGRGQRWQLFPRLGASWSV
                     NQEPFWESSPLASALSTLRLRAAFGETGGQPPSAYSIFDNYAVGSRAGKPALIPGSVA
                     GNPELKPERQREYEAGFDAAIPGNRASLEFTWYNKRSTDLVLGVPLPLSSGFSQQLQN
                     VGALTNKGVEIALSAPVVSTSALQWTSRLSYAANQSRVERLVTANDTLVYGYFNAVAV
                     GQPVGEFYGSYYPRDAQGNVVVTGRLDAACNPIGGTAGIVVSRARGPNCQILKKFLGS
                     PEPKFTMAWNNDFNIGANTQVSLLLDGRFGNKVANFSRRISEYFGAGASTATEQCVTA
                     VNNTIYCQQTLNTERHLLYEEFVEDGSFVKMREAAIRYTLNQPFVRRFGAQSATVSLA
                     ARNLFTWTRYTGIDPEVNLFSANTVARGVEFGTSPIPRMVSVGLNLNF"
     gene            4368..5690
                     /locus_tag="VFN38_11580"
     CDS             4368..5690
                     /locus_tag="VFN38_11580"
                     /inference="COORDINATES: protein motif:HMM:NF019592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /protein_id="HET9012449.1"
                     /translation="MTQPLTTGAKRMRIRQGIGLLTLAVTAACNTGLDLTNPNSPTEQ
                     AALSNIDGVVATSLGMQDQFAGSVLTYVRAPALITDEWGTASKALAADLSLFTGDGID
                     PSFGVVSGPYYATYRVGRTADAIINAVPTIGGLSGGFSAGLIANAKVFKAMSLGMAAL
                     QYAQLPLSASITGSPLVPRAQALDEVIRLLESARSDLQPYTAADLSGFTSRALTTSFD
                     LRNTIDAMLARYYLYTGQYQKAIEAANRVDLTKVSLLTYPDPDLNPIYNYSVVAGYVA
                     PLKSWADQAEAGDQRVPFWVDPAGTPPVGNPPTLRLLPFRFYGTRNAPFPVYLPGEVL
                     LVRAEAKARLNDLPGAVADINAVRTKSGTATTPGAQLPPVTVAQLATLNQVLAQIAYE
                     RRYELFSQGLRWEDLRRLGAIIGVQPKAAFLPTPQDECLTNPNASCGG"
BASE COUNT          961 a         2175 c         1921 g          843 t
ORIGIN      
        1 ggcacctggc cggtgttcta ctacacgccg ctccagcggg cgcgcttcct cgccgacagc
       61 gtgtcggggc ggctcaagac cttcttcggc gactccgcga accgcgacct gcgcgtcgcc
      121 cgcaccctcg cctatgccgg ctcgagctac gacctcctgg ccgagatcct ctgcgagatc
      181 ccgatcgacg ggagtgcgcc gcacacgccc gaggagatcg tgcgtgactt cgccgtgccc
      241 cgcctgaacg aggcgatcag catcgcgacg gccgccaggg ccgccaccac caacgccaac
      301 gcccaggcgg ccgcggactc gatcatcaac ttcgcccggg tgacggcggg ccgcgccctc
      361 ctctacatca acgacaaggc cgcggcccgc gcgttcgcga tccaggtgcc ggccggcttc
      421 gtgttccgcg cgtactactc gtcgcagaac actcgtgaga acaacccgtt ctacgaggcc
      481 gcggtcagca gcccgtgggt gtcgctggag cccgagtaca agcggctcaa cgatccgcgc
      541 gtcccgatgc agacgttgcc gcaaggcgcg cagtccatcg cgcaggggaa tcaggatacc
      601 gtgacggtgg ggacgacgcg aacgatcggc gtgttcgtgc cgaactcgcc gatcatgttc
      661 agcaccttca acaacacggt caccggcgcg gacttcgcgc gggacggcta catcaacatc
      721 gccacgggcc tggaggcgca gcacatcgtg gccgaggccg acggccccac cgccagcacg
      781 ctggcgttcg tgaacgcccg tcgcgccgct ggtcagcagg gtccgtttgc cgggacggac
      841 ctcatggccg agctccgcga gcagcggcgc cgcgacctct tcctcgacgg acaccgtctc
      901 ggcgacatgc gccgctacct gaagtatctc cagatcgacg agttcccgcg cggcgcctat
      961 ccgggctcct cgtcgggcga gacctacaac gacgccacct gcttcccgct cccgctggcc
     1021 gagatcgcgg ggaatccgaa cgtgccgcgg taggcagaag ctcgctgaac cccgaagggc
     1081 acaccggatc cactcggtgt gcccttcggc gtttccccgc atccccgccg tcgagcgctt
     1141 gtcaggccgc gtacccctcg tcataatgcg tcggcgacgg ctttcagcgc ccatcggctc
     1201 ctggagcgcc gcgtccagtg ccgtcacgtg gacgtccttc gcgccaaggg gtgtgaagga
     1261 ccaaatccca ccgaggactt catgcatctc acgcgtctgc tcgggagggc ggccctgctc
     1321 gccctcgggt acgccgcatc gggggccgcc gcgcccctga tcgcgcaaca gccttacgcg
     1381 atccgcgggc gggtcgtgga ggccacctcg cagcgacccc tcgccagcgc ctcggtggtg
     1441 ctgctcggga cccggatcgg ggcgatgacc gatccggaag gccggttcac catccgtggc
     1501 accatcgcgc cgggcacgca gcagctccag gtgagccacc tcggccacag ccggctggtg
     1561 cgcaccgtga cgctgggcgc ggatcgcgac gtcgacgtcg gcacgatcac gatgcagacg
     1621 gccgccatcc agctcaacga ggtcgtcgtc accggcacgg gcacgcccac cgagcgccgg
     1681 aagctcggca gcacgatcac ctcggtgcag ggtgacgagg tgaacaactc tccctccgcg
     1741 cagtccgtcg acaaggcgct ccagggcaag gtcgtgggcg cggtgatcag ccagaacaac
     1801 ggccagccgg gcggcggcgt cagcatccgc ctccgcggca ccggctccat cctcggcggc
     1861 gcggaacccc tcatcgtcgt ggacggcgtc atcgtggaga acaactccga ggcgctcgtc
     1921 agcctcggcg ccaacgccag ccggggcggg gcggcgctga gcaacagcct gtcggacatc
     1981 gcgccgggcg acatcgacca catcgaggtg gtgaagggcg cggcggcggc ggcgctgtac
     2041 ggctcgcgcg ccaacaacgg cgtcatccag atcttcacca agcgcgggag cgcgggcgcc
     2101 accacggtca actaccgcac cgagttcgcc accggcgagg cgcccaagcg ctacgcgctc
     2161 gacgcgtccc ccacggcggg ccgcggtgac gtgctgtacg gcggcgcctc ggcgctcggc
     2221 gcccccgtca cccgctacga ctaccaggac cagatcttcc agcgcgccag caacgtcacg
     2281 aaccagctct ccgtgagcgg cgggggcgag gcgacgacct tctacgcctc ggcgctctgg
     2341 cagaacgaga aggggatcat gcggagcacg gggctgaaca acgtgaacgc gcgcagctcg
     2401 ctcacgcaga agctctcgga caagctctcc ttcaccgtga acggcagcta catccagcgc
     2461 cggaccaact tcgtgccgga gggggagcag acccagggcg tgatcaccac gctcatcttc
     2521 acccccacga cgttcaaccc cgcctacgac gcgaccctcg ggcgctatcc gtacagcccg
     2581 atcctcggca ccaacccgct ggacgtgatc gacaactgga aggcgcagga caacgtcgac
     2641 cgcttcatcg gtggcctgag cacgaactgg aacccgctcg cgaacgtgac ggtgaactac
     2701 ctgttcggct tcgaccacaa caacgagtcg ttctactact accagccgcc gcgctcgggc
     2761 agcgcgtcgt tcaccgggtc catccagaac cctacccggg cgatccagcg cttcaacaac
     2821 gacctcaccg tgacgcacga gggtggcctg tcgcccgcgc tgcaggcgac gacgacgctc
     2881 ggcttccggc acacctcgga tcgcagcgac gaggtgcgcg ccgccgcgct cgggctgtcg
     2941 cccggccaga cgaccgtggg ctccggcggc gcgacgccgt cgtcgagcca ggggatcgtg
     3001 gagctgcgca cgatcggcgg gttcgtccag gagcgcctcg gcttcaacga gcgcctcttc
     3061 gtcaccggtg gcctgaacta cgaggcctcg agcgccttcg ggcgcgggca gcggtggcag
     3121 ctgttcccgc gactgggcgc gtcgtggagc gtgaaccagg agccgttctg ggaatcgtcg
     3181 ccgctcgcca gcgcactgag cacgctgcgc ctgcgtgccg ccttcggcga gacgggaggg
     3241 cagccgccct ccgcgtacag catcttcgac aactacgcgg tgggatcgcg cgccggcaag
     3301 ccggcgctca tccccgggtc ggtcgccggc aatccggagc tcaagcccga gcggcagcgc
     3361 gagtacgaag ccgggttcga cgccgcgatc cccggcaacc gcgcctcgct cgagttcacc
     3421 tggtacaaca agcgctccac cgacctggtg ctcggcgtgc cgctgccgct gagctccggc
     3481 ttcagccagc agctccagaa cgtcggcgcg ctcaccaaca agggcgtcga gatcgccctc
     3541 agcgcccccg tcgtcagcac cagcgcgctc cagtggacct cccggctctc gtacgcggcc
     3601 aaccagtcgc gcgtggagcg gctggtcacg gcgaacgaca cgctggtgta cggctacttc
     3661 aacgcggtcg cggtcgggca gcccgtcggt gagttctacg ggtcgtacta tccgcgcgat
     3721 gcgcagggga acgtcgtcgt caccggccgg ctcgacgccg cctgcaaccc catcggcggc
     3781 accgccggca tcgtcgtgtc gcgcgcccgc gggcccaact gccagatcct gaagaagttc
     3841 ctcggcagcc ccgagccgaa gttcacgatg gcgtggaaca acgacttcaa catcggcgcg
     3901 aacacgcagg tgagcctcct gctcgacgga cgcttcggca acaaggtcgc caacttctcc
     3961 cgccgcatct ccgagtactt cggggcgggg gccagcacgg ccaccgagca gtgcgtcacc
     4021 gcggtgaaca acacgatcta ctgccagcag acgctgaaca ccgagcgcca tctcctgtac
     4081 gaggagttcg tggaggacgg cagcttcgtg aagatgcgcg aggcggccat ccgctacacg
     4141 ctgaaccagc ccttcgtgcg gcgcttcggc gcccagagcg cgacggtgag cctcgcggcg
     4201 cggaacctct tcacctggac acggtacacg gggatcgatc cggaagtgaa tctcttctcg
     4261 gcgaacacgg tggctcgcgg cgtggagttc ggcacctcgc cgatcccccg catggtctcc
     4321 gtcggcctca atctcaactt ctgaggcccg ccatggagac gactcgcatg actcagccac
     4381 tcaccacggg agcgaagcgg atgcgcattc gccaggggat cggcctgctc accctcgcgg
     4441 tgaccgcggc ctgcaacacc ggtctggatc tcaccaaccc gaactcgccc acggagcagg
     4501 cggcgctgtc gaacatcgac ggcgtggtgg ccacctcgct cggcatgcag gaccagtttg
     4561 ccggctcggt gctcacctac gtccgtgctc cggcgctgat caccgacgag tgggggacgg
     4621 cgtcgaaggc gctggccgcg gacctgtcgc tgttcacggg cgacgggatc gacccctcgt
     4681 tcggcgtggt gtcggggccc tattacgcca cctatcgcgt cggccggacc gccgatgcga
     4741 tcatcaacgc cgtgcccacc atcggtggcc tcagcggcgg gttctcggcg gggctgatcg
     4801 ccaacgccaa ggtgttcaag gcgatgtcgc tcggcatggc ggcgctccag tacgcgcagc
     4861 tgcccttgag cgcgtccatc accggcagcc cgctcgtgcc gcgcgcccag gccctcgacg
     4921 aggtcatccg gctgctggaa tccgcgcgct ccgacctgca gccgtacacg gccgcggacc
     4981 tcagcggatt caccagccgc gcgctcacga cgagcttcga cctccgcaac accatcgacg
     5041 ccatgctcgc ccggtactac ctgtacacgg ggcagtacca gaaggcgatc gaggcggcga
     5101 accgggtgga cctgacgaag gtctccctgc tcacctatcc ggacccggac ctgaacccga
     5161 tctacaacta ctcggtggtg gccggctacg tggcgccgct gaagagctgg gccgatcagg
     5221 cggaggccgg cgaccagcgg gtgccgttct gggtggaccc ggcgggcact ccccccgtgg
     5281 gcaatccgcc caccctccgg ctcctgccgt tccggttcta cggcacgcgc aacgccccct
     5341 tcccggtcta cctgccgggc gaggtgctgc tcgtccgcgc cgaggcgaag gcccgcctga
     5401 acgacctgcc gggcgcggtg gccgacatca acgcggtccg gacgaagagc ggcactgcca
     5461 ccacgccggg cgcgcagctc cccccggtca ccgtcgcgca gctcgccacg ctgaaccagg
     5521 tgctggcgca gatcgcctac gagcgccggt acgagctgtt ctcgcagggg ctgcgctggg
     5581 aggacctgcg gcgtttgggg gcgatcatcg gggtgcagcc gaaggccgcc ttcctgccca
     5641 ccccgcagga cgaatgtctg acgaacccga acgcgagctg cggcggctga ccgcccccgc
     5701 cggcgcggtg cgggacctgt gaggccggcc ccgggagggc tccgcgcgtg gcggggctcc
     5761 cccggggccg gctggcttga cccaaccccc cgagctgcct tagcttacga gtctgttccg
     5821 tgccgcctcg ttcggaggcg atccacgtag aggcagatcg acgaacatca tcaggttgaa
     5881 tgccgacgat taaccagctg
//
LOCUS       DASSYW010000726         4104 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1256356, whole genome shotgun sequence.
ACCESSION   DASSYW010000726 DASSYW010000000
VERSION     DASSYW010000726.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4104)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4104)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4104
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1256356"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..804
                     /locus_tag="VFN38_11585"
     CDS             <1..804
                     /locus_tag="VFN38_11585"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HET9012450.1"
                     /translation="LALRAAPAQEAARPLARSIAIDSRLAADAGLHVGDRVVVAPAPG
                     EPGDTVVIAGIVQRRADPAEIARGEYRVRLHLGQLQALLGYGDRVDRFAVATRSPDAT
                     TDAIARINDAAFGFRAHRSTDIAAETSTTFAVVSRFHRAIGVITVAASAIFLLCIMLL
                     KVEERRRDVAALRLMGISARTVVRSVVLEAAGIAVLGSIAGVGVGALASALVNRHYQG
                     VYRTPLKFSIVTGDIVFLAVTLSLALGIVAGWLAARRLVRTPPLALFGR"
     gene            808..1995
                     /locus_tag="VFN38_11590"
     CDS             808..1995
                     /locus_tag="VFN38_11590"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HET9012451.1"
                     /translation="MLFTLAFASLVRHRARTLLAVLGVAVSAAMLLDMVMLSSGMRES
                     FRSLLLSQGFQLRVAPKGTLPFDTEATIRDADSLVAMLRSRPEVDRVSPVLGGQLHVP
                     APAGAVTSAALGVEPSVQGDYEMVEGRDPAASDEMVANDAMLRAIGRRVGDTVTAAAG
                     YDPQLRGLAGARLMRIVGRVRFVYMAAEQRGSALPIATLRAMQGPEAAGRISLAMVRL
                     RDGASPDSARAAIERLVPRVSVVSTAEAIRQVDERLSYFRQLAVILGAVSLIVGFLLV
                     TTLMTVSVNERIGEIAVMRAIGVRKERIVAQIVLEGSAIMLVAAPLGLALGLVTARYL
                     NSILARFPGLPERIDFFLFQPTAAWTALGLLVLSGILSGVYPSWRGASLEIAGTLRQE
                     AVG"
     gene            1992..2717
                     /locus_tag="VFN38_11595"
     CDS             1992..2717
                     /locus_tag="VFN38_11595"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HET9012452.1"
                     /translation="MSGPAESGAESIVAVRDLVREYRMGAEIVHALRGISFTVERGAY
                     AAIVGPSGCGKSTLLNLLGVIDRPTSGTVSIGGERVDRLSDARATDFRLRRIGFVFQR
                     FYLMPALTARENIELPLAEAGLKGPARRDRARALLAYVGLGRREDHRPSQLSGGEQQR
                     VAIARALANEPQLLLADEPTGELDARTGAEMIALFQRLNGDGTTIVVVTHDEELARAA
                     KRVIHMRDGCIVRDERADGAAPT"
     gene            2714..>4104
                     /locus_tag="VFN38_11600"
     CDS             2714..>4104
                     /locus_tag="VFN38_11600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012453.1"
                     /translation="MIRLLAVRNLTLKPWRSVFLLFGFSMGVAVMIVLLSIGEALLDQ
                     AKDEKLVGGGAITVLPEGVDVEVMKTGGLGGLFFSIDHARFIHRQLLAAPRLADAVTA
                     VSPQVEGKLLYLRTADGRERAVRASGDIPSLTAAVGAAPEVTAGQWRDDSLDRRWRAP
                     TDAELRHDIDHFHEPPREVAGDPSWAEWHYFNVVSADRSRWAFVSFIVAGEVGSAADR
                     WGGQVLVTLHEQGKPQRRFTSTAPSREVRYSTTGADVAIGDSRVEVLPDGRYRVRARA
                     REEGGGAPLALDLVVSPAAGAYFPGAALTSGVVSGYVVPALRADASGMLCVRGDCTRY
                     DGVQAYHDHNWGVWRGVTWEWGAARAGEYTVLYGRSEPPDGVAGAQPLFVYLVDKAGF
                     LAVFRPRSIRYDDGRTTLVDGRAIRTPATGEMVDVRGSDTLRLTLRIEDASASDTRTA
                     MVERGDALAARGLA"
BASE COUNT          480 a         1471 c         1548 g          605 t
ORIGIN      
        1 ctcgccctcc gcgctgcccc ggcgcaggag gccgcgcgac ccttggcgcg ctcgatcgcg
       61 atagactctc gcctcgccgc cgacgccggc ctccacgtcg gcgaccgcgt cgtcgtcgcc
      121 cccgcgcccg gtgagcccgg cgacaccgtc gtgatcgcgg gcatcgtgca gcgccgagcc
      181 gacccggccg agatcgcgcg tggcgagtat cgcgtgcgcc tgcacctcgg ccagctccag
      241 gcgctgctcg gctacggcga ccgggtggac cgcttcgccg tggcgacgcg gtcgcccgat
      301 gccaccaccg acgcgatcgc gcgcatcaac gacgccgcat tcggctttcg cgcccaccgc
      361 tcgaccgaca tcgccgcgga gacctccacc accttcgccg tcgtctcgcg cttccaccgc
      421 gccatcggcg tgatcaccgt ggcggcgagc gcgatcttcc tcctttgcat catgctcctg
      481 aaggtcgagg agcggcggcg cgacgtggcg gcgctgcggc tgatgggaat ctcggcccgc
      541 acggtggtcc gcagcgtcgt gctcgaggcc gcgggcatcg cggtgctcgg gagcatcgcg
      601 ggcgtcgggg ttggcgcgct cgcatccgcg ctggtgaacc ggcactacca gggcgtgtac
      661 cgcacgccgc tcaagttctc catcgtcacg ggcgacatcg tcttcctggc cgtcacgctc
      721 tcgctcgcgc tgggcatcgt ggccggctgg ctcgccgcgc ggcggctcgt gcgcacgccg
      781 cccctcgcgc tgttcgggcg ctgagcgatg ctcttcaccc tcgcgttcgc gtcgctcgtc
      841 cgccaccggg cccgcaccct cctcgccgtg ctcggcgtcg ccgtgtcggc cgcgatgctg
      901 ctggacatgg tgatgctctc gagcgggatg cgcgagtcgt tccgctcgct gctcctctcg
      961 cagggcttcc agctccgcgt cgcgcccaag gggacgctcc cgttcgacac cgaggcgacg
     1021 atccgcgacg ccgactcgct cgtcgccatg ctgcggtcgc gtcccgaggt ggaccgggtg
     1081 agccccgtcc tgggcggaca gctccacgtg cccgctcccg ccggcgccgt cacgtcggcc
     1141 gcgctgggcg tggagccgtc ggtgcagggg gattacgaga tggtggaggg ccgcgatccc
     1201 gctgcgtccg acgagatggt ggcgaatgac gcgatgctcc gcgcgatcgg ccggcgcgtg
     1261 ggcgacacgg tgaccgccgc ggcgggatac gatccgcagc tgcgcggcct cgcgggcgcg
     1321 cgcctgatgc gcatcgtcgg ccgggtgcgc ttcgtgtaca tggcggccga gcagcgcggc
     1381 tcggcgcttc ccatcgccac cctgcgcgcc atgcagggtc ccgaggcggc gggccgcatc
     1441 tcgctcgcca tggtgcggct gcgcgacggc gccagccccg actcggcgcg cgcggccatc
     1501 gagcggctcg tgccgcgcgt gtcggtagtc tccacggcgg aggcgatacg acaggtggac
     1561 gagcggctga gctacttccg ccagctcgcc gtgatcctcg gcgccgtcag cctcatcgtc
     1621 ggcttcctcc tcgtgacgac cttgatgacc gtgtcggtga acgagcgcat cggcgagatc
     1681 gccgtgatgc gcgcgatcgg cgtgcgcaag gaacgcatcg tcgcccagat cgtgctggag
     1741 gggagcgcga tcatgctcgt cgcggccccg ctggggctcg cgctggggct ggtgacggcg
     1801 cgctacctga actccatcct cgcgcgcttc ccggggctgc ccgagcggat cgacttcttc
     1861 ctcttccagc ccacggcggc gtggaccgcg ctgggactcc tcgtcctctc gggcatcctc
     1921 tcgggagtct atccgtcgtg gcggggcgcc tcgctggaga tcgccggcac gctgcggcag
     1981 gaggcggtgg gatgagcggg ccggcggagt ccggggcgga gtcgatcgtc gcggtgcgcg
     2041 atctggtacg tgagtatcgc atgggcgcgg agatcgtgca tgcgctccgc gggatctcct
     2101 tcacggtgga gcggggggcg tacgccgcca tcgtcgggcc gtcgggctgc gggaagagca
     2161 ctctcctcaa cctcctcggc gtcatcgacc ggccgacctc gggcacggtg tccatcggcg
     2221 gcgagcgcgt ggaccggctc tcggacgcgc gcgcgacgga tttccggctg cggcgcatcg
     2281 ggttcgtgtt ccagcgtttc tacctgatgc ccgcgctcac ggcgcgggag aacatcgagc
     2341 ttccgctggc cgaggcgggg ctgaaagggc cggcgcggcg cgaccgcgcg cgcgcgctgc
     2401 tggcgtacgt ggggctcgga cggcgtgaag accaccggcc gtcccagctc tccggcggcg
     2461 agcagcagcg cgtcgccatc gcgcgggcgc tggcgaacga gccgcagctg ctgctggccg
     2521 acgaacccac cggcgagctg gacgcgcgca ccggagcgga gatgatcgcg ctcttccagc
     2581 ggctcaacgg cgacggcacg acgatcgtcg tcgtgacgca cgacgaggag ctggcgcgcg
     2641 cggcgaagcg ggtgatccac atgcgcgacg gctgcatcgt ccgcgacgag cgcgccgacg
     2701 gcgcggcccc gacgtgatcc gcctcctcgc cgtccgcaac ctcacgctca agccgtggcg
     2761 gagcgtcttc ctgctgttcg gcttcagcat gggcgtcgcg gtgatgatcg tgctgctctc
     2821 gatcggcgag gccctgctgg atcaggcgaa ggacgagaag ctcgtgggcg gcggcgcgat
     2881 caccgtgctc cccgaggggg tggacgtcga ggtgatgaag accggggggc ttggcgggtt
     2941 gttcttctcc atcgaccacg cgcgcttcat ccaccgccag ctgctcgccg cgccgcggct
     3001 ggcggacgcg gtgacggcgg tgtcgcccca ggtggaaggg aagctgctct acctgcgcac
     3061 ggccgacggc cgcgagcgcg cggtgcgcgc gtccggcgac atcccctcgc tcaccgcggc
     3121 ggtgggggcc gcgccggagg tgacggctgg ccagtggcgc gacgattcgc tcgaccggcg
     3181 ctggcgcgcg ccgacggacg ccgagctgcg gcacgacatc gaccactttc acgagccgcc
     3241 gcgcgaggtc gccggcgacc cgagctgggc ggagtggcac tacttcaacg tcgtctcggc
     3301 cgaccggtcg cggtgggcct tcgtctcgtt catcgtcgcc ggcgaggtcg ggagcgcggc
     3361 cgaccggtgg ggcggccagg tgctcgtcac gctgcacgag cagggcaagc cgcagcgccg
     3421 cttcacgagc acggcgccgt cgcgagaggt gcggtactcg acgacgggcg ccgacgtggc
     3481 gatcggcgac tcgcgcgtcg aggtgctgcc ggacggccgg taccgcgtgc gcgcgcgggc
     3541 gcgggaggag ggcggggggg cgccgctcgc gctggacctc gtcgtctccc cggccgccgg
     3601 cgcgtacttc cccggcgcgg cgctcaccag cggcgtggtg agcggctacg tggtgcccgc
     3661 gctgcgggcc gacgcgagcg gcatgctctg cgtccggggc gactgcaccc ggtacgacgg
     3721 cgtgcaggcc taccacgacc acaactgggg ggtgtggcgc ggcgtcacgt gggagtgggg
     3781 ggcggcgcgc gccggcgagt acaccgtgct gtacggccgg agcgagcccc ccgacggcgt
     3841 ggcgggcgcg cagccgctgt tcgtgtatct ggtggacaag gcgggctttc tcgcggtctt
     3901 ccggccgcgg agcatccgct acgacgacgg gcgcacgacg ctggtggacg gccgcgccat
     3961 ccggacgccg gcgacgggcg agatggtgga cgtgcgcggc tccgacacgc tgcggctcac
     4021 gctgcggatc gaggacgcca gcgcgagcga tacgcggacc gcgatggtgg agcgtggcga
     4081 tgcgctcgcc gcgcgtggcc tcgc
//
LOCUS       DASSYW010000727         2574 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1272400, whole genome shotgun sequence.
ACCESSION   DASSYW010000727 DASSYW010000000
VERSION     DASSYW010000727.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2574)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2574)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2574
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1272400"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..328
                     /locus_tag="VFN38_11605"
     CDS             <1..328
                     /locus_tag="VFN38_11605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012454.1"
                     /translation="LATSPACLGCTFQLAAAEFPERGHPGHATALDHKQAVRARLGDL
                     AAAAGAREPAALADELLLLMDGAFAAARMYGRSSPAARVATAARALIDAHLPAKPRAG
                     ATGRPS"
     gene            328..717
                     /locus_tag="VFN38_11610"
     CDS             328..717
                     /locus_tag="VFN38_11610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012455.1"
                     /translation="MLESLDFIYVPTGDVDAAAAHHQRVLGAELLWKVRAMGTTVAAL
                     RISVGGPQILLSGHLAGERPILVYRVADYQAAVATLRANGLTEIDELEIPHGPCAVFR
                     LDGGQRYAIYQLIRPNADEHFAGRFDE"
     gene            complement(802..>2574)
                     /locus_tag="VFN38_11615"
     CDS             complement(802..>2574)
                     /locus_tag="VFN38_11615"
                     /inference="COORDINATES: protein motif:HMM:NF012422.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /protein_id="HET9012456.1"
                     /translation="RAAGLLAGQPGSNERVANHLLASEPAGDDWVVERLVEAAREAGK
                     RGAPEPKAVFLRRALAEPPAPGNQHGLLLDLGMAEASAGLAGWHEHLQRAMDTAPDAA
                     SLANATIVLAYALMRTQRFAEAVEVLDRVSSSLEPHHPELALRLEAAAVLPGLNDQTT
                     ASSTTLRLEALRERAAGQAAPPEMLAALAYCCVLTNEPAEVGADLATRALLAGSSTSA
                     GSSDPPWFAFAAWFSMATFTLLWAERYTQLRPLLDVSIAEARATGDSSLLASCLANRG
                     WLAHRRGDLIAAEADTRTGLAATALPAPPTTRVLNGAVLVLTLVDRGELDAAAEVLGA
                     FVSEAEKESLFAAALRFARGRLRIAQRRVADGLEDFLAVGALLTHAQTTSPSAFPWRS
                     EAALAHLALGQPELAGHLAEEELALALAFGAPRALGVAKRAAGVVAGGVRGESLLREA
                     IDAFERGDSRLERARALADLGALLRRRNRRSEARALLREALDTAHRAGARTLADQAAT
                     ELRATGARPRRVVLTGLDSLTASERRIAELASQGLTNREIAQTLFVTARTVEGHLTSV
                     FHKLQLSSRDRLPAALASEVPVPA"
BASE COUNT          365 a          899 c          928 g          382 t
ORIGIN      
        1 gctggctacc agcccggcgt gtctgggctg caccttccag ctcgccgcgg cggaattccc
       61 cgagcgcggc catcccgggc acgccacggc cctcgaccac aaacaggccg tccgcgcccg
      121 gcttggtgac ctggccgcgg cggccggcgc ccgggagccg gctgccctgg ccgacgagct
      181 gctgctgctg atggatggcg cgttcgccgc cgcccgaatg tacggccggt ccagccccgc
      241 ggcgcgagtc gccaccgcag cacgggccct gatcgacgcc cacctccccg ccaaaccgcg
      301 agccggcgcg acgggacggc cctcgtgatg ctggagtcgc tcgatttcat ctacgtccca
      361 accggcgacg tcgacgccgc ggctgcccac catcagcggg tgctcggtgc cgaactgctg
      421 tggaaggtgc gggccatggg cacgacggtc gccgcgctgc gaatcagcgt cggcggcccg
      481 cagatcctgc tgtcgggcca cctcgccggc gagcggccga tcctggtgta ccgggtcgcc
      541 gactaccaag ccgcggtcgc gaccctgcgc gccaacgggc tcaccgagat cgacgaactc
      601 gagatccccc acgggccatg tgccgtgttc cggctcgatg gcggccagcg ctacgccatc
      661 tatcagctca tccgccccaa cgcggacgaa cacttcgccg gtcgcttcga cgagtagccc
      721 cggcgtcgac ccaggcgccg gtaggccggc gatctcgtcg cgtcgaccca ggtggcgatt
      781 gacgaaaggc aggtcgggac gctacgccgg aactggaact tcgctggcca gcgcggcagg
      841 gagtctgtcc cgcgagctga gctgcaattt gtggaagacg ctcgtgagat gaccctcgac
      901 cgtgcgcgcg gtgacgaaga gggtctgggc gatctcgcgg ttggtgagtc cctggctggc
      961 gagttcggcg attcggcgct cgcttgctgt cagcgagtcg agccccgtga gcacgacccg
     1021 gcgcgggcgc gcgcccgtgg cgcgcagctc ggtcgccgcc tggtcggcga gcgtcctggc
     1081 gcccgcgcgg tgggcggtgt cgagtgcctc gcggagcagt gctcgagctt cgctgcggcg
     1141 attgcgtcgc cgcagcaggg cgccgaggtc ggcgagagcg cgcgcccttt ccaacctgga
     1201 gtcaccacgc tcgaatgcgt cgatcgcctc gcggagcaga gactctccac gcacaccacc
     1261 ggccacgacg cccgccgcgc gcttcgccac gccgagtgcg cgcggggcgc cgaatgctag
     1321 ggcgagcgcg agctcctctt ccgcgaggtg tcctgccagc tcgggttggc caagcgcgag
     1381 gtgggcgagc gccgcctccg accgccaggg gaaggcactc ggggaagttg tctgcgcgtg
     1441 cgtcaggagt gcgccgacag ccaggaagtc ctcgagtccg tcggcgactc gccgctgtgc
     1501 gatccgcagc cggccacgtg cgaagcggag ggccgcggca aagagcgatt ccttctctgc
     1561 ctctgagacg aatgcaccga gtacctccgc cgctgcgtca agctctcccc ggtcgacaag
     1621 cgtcaggacg agcacagcgc cgttcaggac gcgagtcgtc ggcggtgccg ggagcgccgt
     1681 cgcggcgagt ccggtccgtg tatccgcctc agcggcgatc aggtcgccgc gtcggtgcgc
     1741 gagccagccg cggttggcca ggcagcttgc gagcaggctg ctgtcgccgg tcgcccgcgc
     1801 ctcggcgatc gagacatcca gcagcggccg cagttgcgta tagcgctcgg cccagagcag
     1861 cgtgaacgtc gccatggaga accaggctgc gaatgcgaac catggtgggt cgctggaacc
     1921 cgccgaggtg ctgctgcccg ccagaagtgc gcgggtcgca aggtcggcac cgacttcggc
     1981 gggctcgttc gttaggacac agcagtatgc gagcgcggca agcatttcgg gtggtgcggc
     2041 ttggcctgcg gcccgctcac gtaacgcctc gaggcggagg gtcgtcgatg atgcggtggt
     2101 ctggtcgttc aagccgggga gtacggcggc cgcctcgagc cggagcgcga gttcggggtg
     2161 gtgaggctcg agcgacgacg agacccgatc gagaacctcg accgcctccg cgaatcgctg
     2221 agttcgcatg agcgcgtagg ccagtacgat cgttgcgttg gcgagcgacg cggcgtccgg
     2281 cgcagtgtcc atggctctct gcaagtgctc gtgccagccg gcgagacccg cgctcgcctc
     2341 ggccattccc aggtcgagca gcaatccgtg ctggttgcct ggcgctggtg gttcagcgag
     2401 tgctcggcgc aggaaaacgg ccttcggctc gggagcgccg cgctttcctg cttcgcgggc
     2461 ggcctcgacg agccgctcga cgacccagtc atcgccggca ggctcgctgg ccagcaggtg
     2521 gttggcgacc cgctcgttcg agccgggttg cccggcgagc aacccggcag cacg
//
LOCUS       DASSYW010000728         2525 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_334283, whole genome shotgun sequence.
ACCESSION   DASSYW010000728 DASSYW010000000
VERSION     DASSYW010000728.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2525)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2525)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2525
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_334283"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..724)
                     /locus_tag="VFN38_11620"
     CDS             complement(<1..724)
                     /locus_tag="VFN38_11620"
                     /inference="COORDINATES: protein motif:HMM:TIGR00231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FeoB small GTPase domain-containing protein"
                     /protein_id="HET9012457.1"
                     /translation="MTTRAAAMRPSPGALHAPAGLRVALVGNPNAGKSTLFNALTGMQ
                     QRVANFPGVTVEHAEGGYVHDGLPFTVLDLPGTYSVTPQSPDEAVALDALQGRARGVP
                     AADVIVVVVDAANLERNLFFATQILELGRPTVIALNRMDRVAAEGTRIDVPELMHELG
                     AVVVPVSATRGDGVERLRHVIARAPGLPAPPRRIGLGDETDVERRYAWIAEVVERCVA
                     RRPGSRRTPSDRVDAVLLHRVWG"
     gene            complement(721..1020)
                     /locus_tag="VFN38_11625"
     CDS             complement(721..1020)
                     /locus_tag="VFN38_11625"
                     /inference="COORDINATES: protein motif:HMM:NF015956.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046914 - transition metal ion binding
                     [Evidence IEA];
                     GO_process: GO:0006811 - monoatomic ion transport
                     [Evidence IEA];
                     GO_process: GO:0055072 - obsolete iron ion homeostasis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FeoA family protein"
                     /protein_id="HET9012458.1"
                     /translation="MFALSLLRRMFRRVVPAAVHESPCDSCPLGACRPGLQATVLCIA
                     CHALDAERLRSLGLFEGARVGVVDTRSGMLLDVRGSRLAIGLEVVKGITVRPVDV"
     gene            complement(1093..>2525)
                     /locus_tag="VFN38_11630"
     CDS             complement(1093..>2525)
                     /locus_tag="VFN38_11630"
                     /inference="COORDINATES: protein motif:HMM:NF024938.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="acetate--CoA ligase family protein"
                     /protein_id="HET9012459.1"
                     /translation="PRVARKKPIIVLKAGRSAVGARAASSHTGALAASDDSSEALLTQ
                     AGVLRAGSIEELFDMAVAFTARRARRIPASRRVGVVGNSGGPGVLAADALEMYGLRVV
                     EFAPSTVERLQPLFPAEASLRNPLDMIASATPSGYSASLEAILDDPGVDSAVAIFTPP
                     LGVRTPDVAEAIGAVALRHPDKPVLAVLMGRDGLPQGKAELNKAGVPSYVFPESAARA
                     LGALARYGEILTRPSRAVPPLFAERERAAPIIERAAAAGAAKLSELEALELVRAYGIR
                     TVDSALAVDADCAVRCAEALGYPVVLKIVSPQVSHKSDVGGVRVGLRDAAAVRAAHAE
                     MLAAVRRGVPDAEVAGVLVQRMVPDGEPELIAGFSRVEGFGPMLMVGLGGIYVEALRD
                     VQLRLAPVDRHDALEMLRSLRSARLLGPFRGAPAVDVEAVADVLVRLGGLADAFPQIA
                     ELDVNPLRVGAGGALALDARVVLRAT"
BASE COUNT          351 a          951 c          943 g          280 t
ORIGIN      
        1 gtccccacac ccggtgcagc agcacggcgt ccacccgatc gctcggcgtg cgccgcgagc
       61 cgggccggcg cgccacgcac cgctccacca cctcggcgat ccaggcgtat cggcgctcga
      121 cgtcggtctc gtcgcccagg ccgatgcgcc gggggggcgc ggggagtccc ggcgcgcggg
      181 cgatgacatg gcgcaggcgc tcgacgccgt cgccgcgcgt cgccgacacg ggcaccacga
      241 cggcgcccag ctcgtgcatc agctccggca cgtcgatgcg cgtgccttcc gccgccacgc
      301 ggtccatgcg gttgagggcg atcaccgtgg ggcggccgag ctcgaggatc tgcgtggcga
      361 agaagaggtt gcgctccagg ttcgcggcgt ccacgacgac gacgatcacg tcggccgcgg
      421 gcacgccgcg cgcgcggccc tggagcgcgt cgagcgccac cgcctcgtcg ggcgactgcg
      481 gcgtcacgct gtaggtgccg ggcaggtcga gcacggtgaa ggggagcccg tcgtgcacgt
      541 agcccccctc ggcatgctcc acggtgacgc cgggaaagtt ggcgacccgc tgctgcatgc
      601 cggtgagggc gttgaacagc gtgctcttgc ccgcgttggg attccccacc agcgcgacgc
      661 gcagcccagc cggcgcgtga agcgctccgg gcgacgggcg catcgcggcg gcgcgggtgg
      721 tcacacgtcc accggtcgca ccgtgatccc cttcacgacc tccagcccga tggccaggcg
      781 ggagccgcgg acgtcgagca gcatgccgct cctcgtgtcg acgacgccca cccgcgcccc
      841 ctcgaacagg ccgagcgacc ggaggcgctc cgcgtcgagg gcgtggcagg cgatgcacag
      901 caccgtcgcc tggaggccgg gccggcacgc gccaagggga cacgaatcgc agggcgactc
      961 gtggacggcg gcgggcacga cgcgccggaa catgcgccgg agcagggaga gtgcgaacat
     1021 cgtgggacaa cctcgcctcg ggcgccggcg atgtcagtcg ggagcgctac ggagcggtgt
     1081 cggggctttc cctcatgtcg cccgcagcac cacgcgggcg tccagcgcca gcgcgccgcc
     1141 cgcccccacc cgcagcgggt tcacgtccag ctccgcgatc tgcgggaagg catcggccag
     1201 gccgccgagc cgcacgagga cgtcggccac cgcctccacg tccaccgcgg gggcgccgcg
     1261 gaaggggccg agcagccgcg ccgaccggag cgagcgcagc atctcgagcg cgtcgtgccg
     1321 gtccaccggc gcgaggcgaa gctggacgtc gcgcagggcc tccacgtaga tgccgccgag
     1381 ccccaccatg agcatcgggc cgaacccttc cacgcgcgag aagccggcga tgagctcggg
     1441 ctcgccgtcg ggcaccatcc gctgcaccag caccccggcg acctcggcat ccggcacgcc
     1501 gcgccgcacg gccgcgagca tctcggcgtg ggcggcgcgc accgcggccg cgtcgcgcag
     1561 gccgacgcgc acgcccccca cgtcgctttt gtgcgatacc tgcggcgaca cgatcttgag
     1621 caccaccgga tagccgagcg cctcggcgca gcgcaccgcg cagtcggcgt cgacggcgag
     1681 cgcgctgtcc acggtgcgga tgccgtacgc gcgcaccagc tccagcgcct cgagctcgga
     1741 gagcttcgcg gcgcccgcgg cggcggcccg ctcgattatg ggggcggcac gctcccgctc
     1801 ggcgaagagc ggcggcacgg cgcgcgacgg gcgggtgagg atctctccat aacgggccag
     1861 cgcgcccagc gcgcgcgccg cggactcggg aaacacgtag ctgggcacgc cggccttgtt
     1921 gagctccgcc ttgccctgcg gcagtccgtc gcggcccatc agcaccgcga gcaccggctt
     1981 gtccggatgt cgcagcgcca ccgcaccgat ggcttcggcc acgtcggggg tgcgcacgcc
     2041 gaggggcggg gtgaagatcg ccaccgccga gtcgacgccg ggatcgtcga gaatggcctc
     2101 gagcgaggcg ctgtagccgg agggagtggc cgacgcgatc atgtcgagcg ggttgcgcag
     2161 cgacgcctcg gccgggaaga gcggctggag ccgttcgacg gtggacggcg cgaactccac
     2221 gacccggagc ccgtacatct ccagcgcgtc ggcggccagg acgccgggcc cgcccgagtt
     2281 gcccaccacg ccgacgcggc gcgaggcggg gatgcgccgc gcgcggcgcg ccgtgaaggc
     2341 gaccgccatg tcgaacagct cctcgatgga gccggcgcgc agcacccccg cctgggtgag
     2401 cagcgcctcg ctggagtcgt cgctcgcggc cagcgcgccg gtgtgcgacg acgcggcccg
     2461 cgcgccgacg gccgagcgtc ccgccttgag cacgatgatc ggcttcttgc gcgcgacgcg
     2521 cgggg
//
LOCUS       DASSYW010000729         2137 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1065341, whole genome shotgun sequence.
ACCESSION   DASSYW010000729 DASSYW010000000
VERSION     DASSYW010000729.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2137)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2137)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2137
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1065341"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            129..>2137
                     /locus_tag="VFN38_11635"
     CDS             129..>2137
                     /locus_tag="VFN38_11635"
                     /inference="COORDINATES: protein motif:HMM:NF015155.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MMPL family transporter"
                     /protein_id="HET9012460.1"
                     /translation="MSFVARFVSGRWTKFVVVAAWVLVLVPLFAPLGSKLSDATDDRT
                     ESFLPPSAQSTKVVRLQNQQFAGGQTANGLIVYRRPGGFSADDRRSIAADASRAADTI
                     PVVGKPVVPFQRGSPANTVSRDGSTAFTTLTVPANNDKLADWGKDVRDAIGKGSGGMR
                     IYVTGDIGFNADFDEVFGSLDTKLLFATVVLVLFLLLAIYRSPVIAVIPLVVVGIAYA
                     VAQGLVYLYAESGATVSSNATTILVVLMFGVGTDYCLLLVSRYREELRHVEDKHAAME
                     RAMERVGPALIASGVTVVLAMLVLLVAENGSIHSLGPSCAIGIACALVAGITLLPALL
                     TIVGRRGFWPRKKLVAYGTADAEVARRGIWGRIGERVLARPGAALGFTVLLFGAGALG
                     LLAYKEDYSTRGFFKKATDSVDGFDVLARAFPSGTLAPTTVLVQREDGPVRPADVQRA
                     VARLRGQPQVASVTPSPQLSRNRRIAQVSVVFRDDPYQAAALERVPGLRDRLKDMGPG
                     VTALVGAGSAINYDYNTSSARDFKLIVPLALLVIAIILGVLLQAVVAPLVLIATVMAS
                     FFGTLGLAILFFRYVDGQGGIDASLPTFAFIFLVALGTDYTIFLMSRVREEARRHGTR
                     EGTLRALAATGPVITSAGLILAGTFSVLMTLPVTFAFNIGFIVAVG"
BASE COUNT          273 a          753 c          763 g          348 t
ORIGIN      
        1 aggcatacgg ccgcgccgcg tacgagcggg cgtccgggat agggcgaatc cggcacgccc
       61 gggagtttcg acgctgggtc ggatgaatcg gttgactgcc tccgggacgg ggcgtagctt
      121 ggcccctcgt gtcgttcgtc gcccgcttcg tctccggccg ctggaccaag ttcgtcgtgg
      181 tcgccgcctg ggtgctggtg ctcgtccccc tgttcgcgcc actcggctcg aagctctcgg
      241 acgccaccga cgaccggacg gagtcgttcc tgccgccgag cgcccagtcg acgaaggtgg
      301 tgcggctcca gaaccagcag ttcgccggcg gccagaccgc caacggcctg atcgtctacc
      361 ggcgcccggg cggcttcagc gccgacgacc gccgctcgat cgccgccgac gcgagccgcg
      421 ccgccgacac gatcccggtg gtggggaagc cggtcgtgcc gttccagagg ggatcgccgg
      481 cgaacacggt gtcgcgcgac ggctccaccg cgttcaccac gctcacggtg ccggcgaaca
      541 acgacaagct cgccgactgg ggcaaggacg tgcgcgacgc gatcggcaag ggcagcggcg
      601 gcatgcgcat ctacgtgacc ggcgacatcg gcttcaacgc cgacttcgac gaggtgttcg
      661 gctcgctcga cacgaagctg ctgttcgcga cggtggtgct cgtgctcttc ctgctgctcg
      721 cgatctaccg ctcgccggtc atcgcggtga tcccgctcgt cgtggtgggc atcgcctacg
      781 cggtcgcaca gggactcgtc tacctctatg ccgagtccgg ggcgacggtg agctcgaacg
      841 ccaccacgat cctcgtggtt ctgatgttcg gcgtgggcac cgactactgc ctgctgctcg
      901 tgtcgagata cagggaggag ctgcggcacg tcgaggacaa gcacgccgcc atggagcgcg
      961 cgatggagcg cgtcggtccg gcgctcatcg cgagcggcgt gacggtggtg ctggcgatgc
     1021 tcgtgctgct ggtggccgag aacggctcga tccactcgct cggcccgtcg tgcgcgatcg
     1081 ggatcgcgtg cgccctggtg gcgggcatca cgcttcttcc ggccctgctc acgatcgtcg
     1141 gccggcgcgg cttctggccg cgcaagaagc tcgtggcgta cggcaccgcc gacgccgagg
     1201 tggcgcggcg cggcatctgg ggccggatcg gagagcgcgt gctcgcgcgc ccgggcgccg
     1261 cgctcggctt cacggtgctc ctgttcggcg ccggcgcgct cggcctactc gcctacaagg
     1321 aggactacag cacccgcggc ttcttcaaga aggccaccga cagcgtggac ggcttcgacg
     1381 tgctcgcccg ggcgttcccg tccggcacgc tcgccccgac cacggtgctc gtgcagcgcg
     1441 aggacggccc ggtgcggccc gcggacgtgc agcgggcggt ggcgcggctg cgcggccagc
     1501 cgcaggtggc gtccgtgacg ccctcgccgc agctctcgcg caaccgccgg atagcccagg
     1561 tgagcgtggt gttccgcgac gacccctacc aggcggccgc cctcgagcgg gtgcccggcc
     1621 tgcgcgaccg cctgaaggac atggggccgg gggtgacggc gctcgtcggg gccggcagcg
     1681 cgatcaacta cgactacaac acgagctcgg cgcgcgactt caagctgatc gtgccgctcg
     1741 cgctgctcgt gatcgcgatc atcctcggag tgctgcttca ggcggtggtg gcgccgctcg
     1801 tgctgatcgc caccgtgatg gcgtcgttct tcggcacgct cgggctggcg atcctgttct
     1861 tccgctacgt cgacgggcag ggcggcatcg acgcgtcgct gcccacgttc gcgttcatct
     1921 tcctcgtcgc gctcggcacc gactacacga tcttcctgat gagccgcgtg cgcgaggagg
     1981 cgcgccgcca cggcacacgc gagggcacgc tgcgcgcgct ggccgccacc gggcccgtga
     2041 tcacgagcgc cggcctcatc ctcgctggca cgttctcggt gctgatgacg ctgccggtga
     2101 cgttcgcgtt caacatcggg ttcatcgtgg cggtggg
//
LOCUS       DASSYW010000730         3555 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_334762, whole genome shotgun sequence.
ACCESSION   DASSYW010000730 DASSYW010000000
VERSION     DASSYW010000730.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3555)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3555)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3555
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_334762"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..620
                     /locus_tag="VFN38_11640"
     CDS             <1..620
                     /locus_tag="VFN38_11640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012461.1"
                     /translation="MHTLRFHALRPTMTRRISALLLLAVACTGDTPSPDRAADSGSGA
                     ATRTAAPAAWVVRPDSFGRLPLGVPLAQAVAALADSIPVDFGTFDSCGQVTPAPLPRG
                     TSLMILRDSVGAPVRVERVDVAATGIPTAEGAMVGDSEERVLALYGVRARVEPHKYTG
                     PEGHYLVVTSPGDTLHRIVFETDGLRVLRYRAGRRPAVEYVEGCA"
     gene            747..1526
                     /locus_tag="VFN38_11645"
     CDS             747..1526
                     /locus_tag="VFN38_11645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012462.1"
                     /translation="MTSTRSLRLAALVAVAAFASACSDSTAPGNLQPAELSQVLSEMQ
                     PASLTPLNAQISAAPSAALSAPVPSSCSYDATAKSFVCPSVTVTGITVSRSFTLFDAS
                     GNPQSAFDRATTASVRMQTSFAGTVASGGSTVTIDQQQDVTMSGLLTGARTINGTSLG
                     HVAGTIGNGTTTTPVASTISTTITNLVIPASSTGANRFPSSGTVAATTTTTVGALPAS
                     TVNATITFDGTSKAAVTVTTNGRTTSCTVDLTAQSAALCTV"
     gene            1674..2435
                     /locus_tag="VFN38_11650"
     CDS             1674..2435
                     /locus_tag="VFN38_11650"
                     /inference="COORDINATES: protein motif:HMM:NF016143.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="neutral zinc metallopeptidase"
                     /protein_id="HET9012463.1"
                     /translation="MRIDIARWAGHAGLAAVIAASAACGSTEAARFAPAAAAAPFADV
                     TPREIAQSNAKVRMAYDALVGMWSDDLAERGARFVPPGLVRYRGAVRTPCGVMSGNNA
                     AYCTARNTIYFDEIFVARQAKEAALDLGTDGDMAAVGIIAHEMGHAVAMQLGVDSPVP
                     YYNEAAADCLAGAFTSRSALDGTLEAGDLDEAFHGLAASGDPTPQLTGNRRLDARITY
                     RAALLGHGTRDQRLANFTAGYEGGADVCLAGMEGG"
     gene            2498..2935
                     /locus_tag="VFN38_11655"
     CDS             2498..2935
                     /locus_tag="VFN38_11655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012464.1"
                     /translation="MTMRRQRREDPAYLTAMREAKELFDAEMAKNSMKGRGRPKTVVV
                     AAPAAATEVEIDHEVADDVEDLHVDEADEEAGEHDEGEHEEEAIVAPPKSAKPAARAA
                     VKPAKSAGKPAAKPAAKAPARTATKPAAKKKGAVAKKVAAKKR"
     gene            complement(2945..>3555)
                     /locus_tag="VFN38_11660"
     CDS             complement(2945..>3555)
                     /locus_tag="VFN38_11660"
                     /inference="COORDINATES: protein motif:HMM:NF014428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HET9012465.1"
                     /translation="GAVLAKPILVRVVDANGSGVANSVVQLSPSSGTVADSALTTDEQ
                     GVARVRWTMGRSAGEHSLALRVEGVKKLVKVAALTVPAAPANLSFDDAPAPEKRAKGK
                     EKSRHLYAVVTDVYGNPVADAKVTFTTKSGTVTPTRAVSDTRGRAALTWTPGTKAGEQ
                     SVTGAVRATDVKGSYTIEVGGAAHEPTPRAKSSRSIPMKKGR"
BASE COUNT          513 a         1401 c         1169 g          472 t
ORIGIN      
        1 ccatgcacac gctccgcttc catgccctcc ggccaaccat gacgcgtcga atctccgccc
       61 tgctcctgct ggccgtcgca tgcaccggcg acacgccctc gcccgatcgc gccgccgatt
      121 ccggcagcgg cgcggcgacg cgcaccgccg cccccgcggc atgggtcgtc cgccccgaca
      181 gcttcggccg gctgccgctc ggcgtgccgc tggcccaggc cgtcgccgcg ctcgccgatt
      241 ccatcccggt cgatttcggt accttcgaca gttgcggtca ggtcacgccc gcgccgctgc
      301 cgcgcggcac gtcgctcatg atcctgcgcg acagcgtggg cgcgcccgtt cgtgtggagc
      361 gcgtggacgt cgcggccacc ggcatcccca cggcggaggg ggcgatggtc ggcgactccg
      421 aggagcgcgt gctcgccctc tacggcgtcc gtgcccgcgt ggagccgcac aagtacaccg
      481 ggccggaggg gcactatctc gtcgtcacca gtccgggcga taccctgcac cggatcgtct
      541 tcgagaccga cggcctgcgc gtgctgcgct accgcgccgg ccgccggccg gcggtggaat
      601 acgtcgaggg ttgcgcgtga cggaggtcac gccgccgtcc gcggcggctc gctagactcg
      661 gggatcaccg ggcggcgcgg ctccgcgccc gccgaacgaa tcacctgacg cacccgtcgt
      721 ccgcttcatc aagggagtcc atcacgatga catccacgcg ttctctccgc ctcgccgcgc
      781 tcgtcgcggt cgcggcgttc gcctccgcct gctccgattc caccgcgccc ggcaaccttc
      841 agcccgcgga gctgagccag gtcctcagcg agatgcagcc cgcgtcgctc acgccgctca
      901 acgcgcagat ctccgcggcg ccctcggccg cgctcagcgc gccggtcccg tcgtcgtgca
      961 gctacgacgc caccgcgaag agcttcgtct gccccagcgt gaccgtgacc ggcatcaccg
     1021 tgtcgcgcag cttcaccctg ttcgacgcga gcggcaaccc gcagtcggcg ttcgaccggg
     1081 ccaccaccgc gtccgtccgc atgcagacct cgttcgccgg caccgtcgcc agcggcggct
     1141 ccacggtgac catcgaccag cagcaggacg tcacgatgag cggcctcctc accggcgccc
     1201 gcacgatcaa cggcacctcg ctcggccacg tggccggcac catcggcaac ggcacgacca
     1261 ccacgccggt cgccagcacg atcagcacga cgatcaccaa cctcgtgatc cccgcgtcgt
     1321 ccaccggcgc gaaccgcttc ccgtcgtcgg gcaccgtcgc cgccacgacc accaccaccg
     1381 tcggcgccct gccggcatcc acggtgaacg ccacgatcac cttcgatggc accagcaagg
     1441 cggcggtcac cgtcaccacg aacggtcgca ccacgagctg cacggtggac ctcacggccc
     1501 agtcggcggc gctctgcacg gtgtgaccgg ccgctgatcg tcgcaggcag acaacatgaa
     1561 gagcggggga gcgccgtcgg cgctcccccg ctttcgtcat tccccccgac tcccgctcca
     1621 cgcggcgaaa ctccgtgccc ttccacgggt atcagctccc agggaggtac gccatgcgca
     1681 tcgacatcgc acgctgggcc ggccacgccg ggctcgccgc cgtcatcgcc gcctcggccg
     1741 cctgcggctc cacggaggcc gcccggttcg cccccgccgc ggcggcggcg ccgtttgccg
     1801 acgtcacccc cagggagatc gcccagtcca acgccaaggt ccggatggcg tacgacgctc
     1861 tcgtcgggat gtggtccgac gacctcgcgg agcgcggcgc gcgcttcgtc ccgcccggcc
     1921 tcgtgcgcta ccgcggcgcc gtgcgcaccc cctgtggcgt catgagcggc aacaacgccg
     1981 cctactgcac ggcgcgcaac accatctact tcgacgagat cttcgtcgcc cgccaggcca
     2041 aggaggccgc cctggacctc ggcaccgacg gcgacatggc cgccgtcggc atcatcgcgc
     2101 acgagatggg gcacgccgtc gccatgcagc tcggcgtcga ctcgcccgtg ccgtactaca
     2161 acgaggcggc cgccgactgt ctggccggcg ccttcaccag ccgctcggcg ctcgacggca
     2221 ccctcgaggc gggcgacctg gacgaggcct tccacgggct ggccgcctcg ggcgacccca
     2281 cgccccagct caccggcaat cggcgcctcg acgcgcgcat cacctaccgc gccgcgctcc
     2341 tgggtcacgg cacgcgcgac cagcggctgg cgaactttac cgccggctac gaggggggcg
     2401 ccgacgtctg cctagccggg atggagggag gctgagcccg gaagcggcag ccgtcacaaa
     2461 tggttagttt gcgtctccca ctcatggagt ccgaggcatg accatgcgca ggcagcgccg
     2521 ggaagacccg gcgtacctca ccgcgatgcg cgaagcgaag gagctgttcg acgccgagat
     2581 ggcgaagaac agcatgaagg gacgtggccg tcccaagacc gtcgtcgtcg cagcgcccgc
     2641 agccgccacg gaagtcgaga tcgaccacga ggtcgccgac gacgtcgagg acctccacgt
     2701 cgacgaggcg gacgaggagg ccggggagca cgacgaggga gagcacgagg aggaggcgat
     2761 cgtcgcgccg ccgaagagcg cgaagccggc ggccagggcc gccgtgaagc cggcgaagag
     2821 cgccggcaag cccgccgcga agcccgccgc caaggcgccg gcgcggaccg cgacgaagcc
     2881 ggcagcgaag aagaagggcg ccgtcgcgaa gaaggtcgcg gcgaagaagc gctagccggt
     2941 cgggctagcg tcccttcttc atcgggatcg agcgcgacga cttggctcgc ggcgtcggct
     3001 cgtgtgcggc gccgcccacc tcgatggtgt agctcccctt cacgtccgtc gcccgcaccg
     3061 cgccggtgac gctctgctca cccgccttcg tgccgggcgt ccacgtcagc gcggcgcggc
     3121 cgcgcgtgtc actcacggcc cgcgtgggcg tcacggtgcc ggacttcgtg gtgaaggtca
     3181 ccttcgcgtc cgccaccgga ttgccgtaca cgtcggtgac gacggcgtag aggtgacggc
     3241 tcttctcctt tcccttcgcg cgcttctccg gcgcgggcgc gtcgtcgaac gagaggttgg
     3301 ccggcgcggc gggcaccgtg agcgccgcca ccttcaccag cttcttcacc ccctccaccc
     3361 gcagggcgag cgagtgctct cccgccgagc gccccatcgt ccagcgcacc ctggccacgc
     3421 cctgctcgtc ggtggtgagc gcgctgtccg ccaccgtgcc gctcgagggt gagagctgca
     3481 ccaccgagtt ggccacgccg ctgccgttgg cgtccaccac ccggacgagg atcggcttcg
     3541 ccagcaccgc gcccg
//
LOCUS       DASSYW010000731         2238 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_711191, whole genome shotgun sequence.
ACCESSION   DASSYW010000731 DASSYW010000000
VERSION     DASSYW010000731.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2238)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2238)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2238
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_711191"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            13..987
                     /locus_tag="VFN38_11665"
     CDS             13..987
                     /locus_tag="VFN38_11665"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HET9012466.1"
                     /translation="MPPVSMPSVALSFVVPLYFSAETIANVVAQIDALPIPGGSEIIL
                     VNDGSTDRTSEVCRDLIRRRSASAAPLILVEHARNFGEHNAVMTGWRHASGAYIVNLD
                     DDGQNPPAEAVRLWQHAKAHQLDVVFGHYDVKQHSAWRNAGSWLTNRMTDWALDKPHG
                     FYLSSFRCVSGFVTQQVAAYTGPYPYLDGLLLQITQRIGSISVRHDVRRAGQSGYTLR
                     RLIRLWLSAWLNFSLLPLRAATFLGLLTAGAGLLAFAAVVWLWMTNRGPAYGWGWVMA
                     AVLVFSGTQLVMLGLIGEYVGRMFLTVNQRPQAVVREVVTSTVGRMVI"
     gene            998..1900
                     /gene="accD"
                     /locus_tag="VFN38_11670"
     CDS             998..1900
                     /gene="accD"
                     /locus_tag="VFN38_11670"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase, carboxyltransferase
                     subunit beta"
                     /protein_id="HET9012467.1"
                     /translation="MAWFKKQRKPIEPPDKQSRVPEGLWVKCPSCSTIIYNKDLAASL
                     SVCTKCAHHFRLSATERLRTLFDGEWREYDRGLTSTDPLKFTDTKPYHKRLDTSIAAT
                     GLNDAVIAATGTINGIETSVAAMEYSFIGGSMGVVVGEKITRAIERAIAGRMPVIIVS
                     CSGGARMMEGALSLMQMAKISGALARLDRAKLPYVSVLTDPTTGGVTASFAMLGDVNI
                     AEPKALIGFAGPRVIEQTIRQTLPEGFQRSEFLLEHGMLDAVVDRREMKDIITRILRF
                     GRSETQPKPAPVPPALAEATTVEK"
     gene            1917..>2238
                     /locus_tag="VFN38_11675"
     CDS             1917..>2238
                     /locus_tag="VFN38_11675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012468.1"
                     /translation="MTSVEFLFSLERLGMKFGLENIQRLCAALDHPERSFPSIIVAGT
                     NGKGSVTAMTAAALHASGCRTGRYTSPHLERIEERFVIGEREVSRPELESAADTVRGA
                     IADLL"
BASE COUNT          364 a          781 c          741 g          352 t
ORIGIN      
        1 cgggctggta tcatgccacc cgtcagtatg ccgtccgtcg cactcagctt cgtcgtgccg
       61 ctctacttca gcgccgagac catcgccaac gtcgtcgcgc agatcgacgc gctgccgatt
      121 ccgggtggca gcgagatcat cctggtgaac gacgggagca ccgaccggac cagcgaggtc
      181 tgccgcgact tgattcgccg ccgcagcgcg tcggcggcgc cgctgatcct ggtggagcac
      241 gcgcgcaatt tcggcgagca caacgccgtc atgacgggct ggcgccacgc gtcgggcgcc
      301 tacatcgtca acctcgacga cgacgggcag aatccgccgg cggaggcggt gcggctgtgg
      361 cagcatgcga aggcgcacca gctcgatgtc gtgttcggac actacgatgt gaagcagcac
      421 tcggcgtggc gcaacgccgg cagctggctg acgaaccgga tgaccgactg ggcgctcgac
      481 aagccgcacg gcttctatct ttcgagcttc cgctgcgtca gcggcttcgt gacgcagcag
      541 gtcgcggcct acaccgggcc atacccgtat ctcgacggcc tgctcctcca gatcacgcag
      601 cgcatcggat cgatcagcgt gcgccacgac gtgcgccgcg ccggccagag cggctatacg
      661 ctgcggcggt tgatccgcct gtggctcagc gcgtggctga acttctcgct gctgccgctg
      721 cgggcggcga cgttcctcgg gctgctgacc gccggcgccg gcctgctcgc cttcgccgcc
      781 gtcgtctggc tgtggatgac caaccgcggt cccgcctacg gctggggctg ggtcatggcc
      841 gccgtgctcg tgttctccgg cacgcagctc gtgatgctcg ggctgattgg cgaatacgtc
      901 ggccggatgt tcctcaccgt gaaccagcgc ccgcaggcgg tggtacgcga ggtggtcacg
      961 agcaccgtcg ggcgcatggt aatctagctg agcatcgatg gcctggttca agaagcagcg
     1021 caagcccatt gagccgcccg acaagcaaag ccgggttccc gaagggctct gggtcaagtg
     1081 cccgtcctgc tcgacgatca tctacaacaa ggatctggcg gcgagcctga gcgtgtgcac
     1141 gaagtgcgcc catcacttcc gcctgagcgc gacggaacgg ctgcgtacgc tgttcgacgg
     1201 cgaatggcgc gagtacgacc gcggcctcac ctcgaccgac ccgctgaagt tcaccgatac
     1261 caagccgtat cacaagcgcc tcgacaccag catcgccgcg accggcctca acgacgcggt
     1321 catcgccgcg accggcacga tcaacggcat cgagacctcc gtcgccgcga tggagtactc
     1381 gttcatcggc ggcagcatgg gcgtggtcgt cggcgagaag atcacgcgcg cgatcgagcg
     1441 cgcgattgcc ggacgcatgc cggtgatcat cgtgtcctgc tcgggcgggg cgcggatgat
     1501 ggaaggcgcc ctctcgctga tgcagatggc caagatcagc ggcgcgctcg cgcgcctcga
     1561 ccgcgcgaag cttccctacg tctcggtgct caccgatccg acgaccggcg gcgtcaccgc
     1621 gagcttcgcc atgctcggcg acgtcaacat cgccgagccg aaggccctca tcggcttcgc
     1681 cggcccgcgc gtgatcgagc agacgatccg gcagacgctg cccgagggct tccagcgcag
     1741 cgagtttctc ctcgagcacg gcatgctcga cgccgtcgtc gatcgccgcg agatgaagga
     1801 catcatcacg cgcatcctcc gattcgggcg cagcgagacg cagccaaaac cggcgccggt
     1861 gccgccggcg ctcgccgaag ccacgaccgt cgagaaataa gcacgcggcg ccgcccgtga
     1921 cctccgtcga attcctgttc tcgctcgagc ggctcgggat gaagttcggc ctcgagaaca
     1981 tccagcggct gtgcgccgcc ctcgatcatc ccgagcgcag cttcccgtcg atcatcgtcg
     2041 ccgggacgaa cggcaagggg tcggtcacgg cgatgaccgc ggcggcgctg cacgcgtccg
     2101 gctgccgcac cggccgctac acgtcgccgc atctcgagcg catcgaggaa cggttcgtga
     2161 ttggcgagcg cgaggtgtcg cgccccgagc tcgaatcggc ggccgacacg gtgcggggcg
     2221 cgatcgcgga cctcctcg
//
LOCUS       DASSYW010000732         2529 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_833634, whole genome shotgun sequence.
ACCESSION   DASSYW010000732 DASSYW010000000
VERSION     DASSYW010000732.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2529)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2529)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2529
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_833634"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..952)
                     /locus_tag="VFN38_11680"
     CDS             complement(<1..952)
                     /locus_tag="VFN38_11680"
                     /inference="COORDINATES: protein motif:HMM:NF012692.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HET9012469.1"
                     /translation="MVRGESPGALRSLRELNRERVVYALRELGVASRADVARRTGLSP
                     ATVSTIVTELRATGSVVDHAGSDLSDKSTRGGRPPMLIALDRSAGLAMGIDFGKSHLA
                     VAVSDLSHEVLAEIRREMPADYDAVTGLDEAAELVDEVLAEAGATRSQVIGVGVGLPG
                     PVHTSTGTIGSSAILPGWQDLRVAHEMGRRLDMPVYVDNDANLGALAELHWGAGRGSS
                     TLVYLKVATGIGAGLVVGGHLFHGAGGTAGEIGHTMMDEDGPICRCGSRGCLEMVASA
                     PAIVEMLRPSLGDDLTAESVLEHARDGDARSRRAIGDAGRH"
     gene            1174..2409
                     /locus_tag="VFN38_11685"
     CDS             1174..2409
                     /locus_tag="VFN38_11685"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: protein motif:HMM:NF013954.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_process: GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HET9012470.1"
                     /translation="MTTQEKVRPDVETAESGCLYDGSVEIQELTEAELKKAEQAAEAG
                     GRSVAARRFKVVTKIRSQNWSRDRKMHAPFGITLHHTGGSFAGDLATLTKPASNPRYS
                     VSANDYVTKKGVIYELCEFPKRAWHAGDASWKGITDGNSHFWGIEIENRGTPSDPYPK
                     EQIDAVVWRCRQIRKKLGIKSPDMLTRHRDICMPRGRKADTSDRFPWKEVRKRVFAAH
                     DPTDDDAKPKPPKPPKPPAKVSAKSALLAEPRATADQAYAAIVAKPNGEYTDKDVRTI
                     VDAYWKEAPRVGLDPLVMVAQMAHETAYLSSHWAARPRRNPAGIGVTGEPGKGVSFPS
                     WSKAVRAHLGRVLAYAIPKGKENAAQKKLIAEALEWRALPDTYRGVAPRLGDLTKKWA
                     TDPKYGASISRLANQIAKG"
BASE COUNT          419 a          886 c          910 g          314 t
ORIGIN      
        1 tgtggcggcc cgcgtcgccg atcgcccggc ggctgcgcgc gtcgccatcg cgcgcgtgct
       61 cgagcaccga ctccgccgtg aggtcgtcgc ccaggctcgg gcgcagcatc tccacgatcg
      121 cgggcgccga cgccaccatc tcgaggcagc cgcggctgcc gcagcggcag atcggcccgt
      181 cctcgtccat catcgtgtgc ccgatctcgc cggcggtgcc gcccgctccg tggaacagat
      241 ggccgcccac cacgagtccg gcgccgatgc ccgtcgccac cttcaggtag acgagcgtgg
      301 aggagcctcg ccccgcgccc cagtggagct ccgcgagggc gccgaggttc gcgtcgttgt
      361 ccacgtacac gggcatgtcg agccggcggc ccatctcgtg cgccacccgc aggtcctgcc
      421 acccgggcag gatcgcggac gagccgatcg tgccggtcga ggtgtgcacc ggccccggga
      481 ggccgactcc caccccgatc acctggctgc gcgtggcgcc cgcctcggcg agcacctcgt
      541 ccaccagctc ggcggcctcg tcgagcccgg tgaccgcgtc gtagtcggcc ggcatctccc
      601 gccgtatctc ggcgagcacc tcatgcgaga ggtcggacac cgccaccgct aggtggctct
      661 tgccgaagtc gatccccatc gccaggccgg cggagcggtc gagcgcgatc agcatcggcg
      721 ggcggccgcc gcgcgtgctc ttgtcgctca ggtccgagcc ggcgtggtcg acgacgctgc
      781 cggtggcacg cagctcggtg acgatggtgg agacggtggc cggcgagagg ccggtccggc
      841 gggccacgtc ggcgcggctt gccacaccga gctcgcgcag cgcatacacg acgcgctcgc
      901 ggttgagctc gcgcagggag cgcagtgctc cgggactctc tcccctcacc acggggcgga
      961 ctctctacct ctcggcgagg tttgtcaaga ctctgaattt aaatgttcgg attccggcgc
     1021 ggtttattcg acaccccaac aaacggccgg gctcgcggcg ccgtggcaaa tggcgcgaaa
     1081 ggagttgtta agtcagcact tcctgacctt gcgcgccgca ctccttggac ttagggtcgg
     1141 gagggcacag gcaacacggc gaggggagcg cgcatgacca ctcaggagaa agtccggccg
     1201 gatgtcgaga ccgccgagag cggctgcctc tacgacggga gcgtcgagat ccaggagctg
     1261 acggaggccg agctgaagaa ggccgagcag gcggccgagg cgggcggccg gtcggtcgcg
     1321 gcgcgccgct tcaaggtcgt gacgaagatc cgcagccaga actggtcgcg tgacaggaag
     1381 atgcacgcgc ccttcgggat cacgctgcac cacaccggcg gcagcttcgc gggcgacctc
     1441 gccacgctga cgaagccggc gagcaacccg aggtactccg tgtcggcgaa cgactacgtg
     1501 accaagaagg gcgtgatcta cgagctgtgc gagttcccga agcgcgcgtg gcatgcgggc
     1561 gacgcctctt ggaagggcat caccgacggc aacagccact tctgggggat cgagatcgag
     1621 aaccgcggga cgccgagcga cccgtacccg aaggagcaga tcgacgcggt ggtctggcgc
     1681 tgccgccaga tccgcaagaa gctcggcatc aagagcccgg acatgctcac gcgccaccgc
     1741 gacatctgca tgccgcgcgg gcgcaaggcc gacacctcgg accggttccc gtggaaggag
     1801 gtgcgcaagc gcgtattcgc cgcgcacgac ccgaccgacg acgacgcgaa gccgaagccg
     1861 ccgaagccgc caaagccgcc ggcgaaggtg agcgcgaagt cggcgctgct ggccgagccg
     1921 cgcgccaccg cggaccaggc gtatgcggcg atagtcgcga agccgaacgg cgagtacacc
     1981 gacaaggacg tgcgcaccat cgtcgacgcg tactggaagg aggcgccgcg cgtcgggctc
     2041 gacccgctgg tgatggtcgc gcagatggcg cacgagaccg cctacctcag ctcgcactgg
     2101 gccgcccggc cgcgccgcaa ccccgccggg atcggcgtga cgggcgagcc cgggaagggc
     2161 gtgtcgttcc cgagctggtc gaaggcggtg cgggcgcacc tcgggcgcgt gctcgcgtac
     2221 gcgatcccga agggcaagga gaacgcggcg cagaagaagc tgatcgccga ggcgctcgag
     2281 tggcgggcgc tgccggacac ctaccgcggc gtggcgccgc ggctcggcga cctcacgaag
     2341 aagtgggcca ccgaccccaa gtacggggcg tcgatctcgc ggctcgccaa ccagatcgcg
     2401 aaggggtgag gggacgatgg ccgacgagca gcagacacag gccggcgagc ggctgagcgt
     2461 gccggagccg gactgcgacg ccgccaccga tcccgacgcg gcgggcatcg cagagctcgc
     2521 tcccgagcc
//
LOCUS       DASSYW010000733         3024 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1806281, whole genome shotgun sequence.
ACCESSION   DASSYW010000733 DASSYW010000000
VERSION     DASSYW010000733.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3024)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3024)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3024
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1806281"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..742)
                     /gene="ftsZ"
                     /locus_tag="VFN38_11690"
     CDS             complement(<1..742)
                     /gene="ftsZ"
                     /locus_tag="VFN38_11690"
                     /inference="COORDINATES: protein motif:HMM:TIGR00065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HET9012471.1"
                     /translation="MAHGTEMTSTSADALRLKLDEQSRSGARIKVVGVGGGGSNAVNR
                     MVAAGLDGVEFIVANTDLQALRFNAAHNKLQIGAKLTKGLGAGADPNVGRQAALEDTE
                     KLIEALDGADMVFVTTGLGGGTGTGAAPVIASLASELGALTIAVVTKPFRFEGKKRQV
                     QAEQGLEELRECVDTVITIPNERLLATIARTTSLTDAFAGADDVLRQAIQGISDLILV
                     PGLINLDFADVKTIMAGMGMAMMGTGIAE"
     gene            complement(761..1996)
                     /gene="ftsA"
                     /locus_tag="VFN38_11695"
     CDS             complement(761..1996)
                     /gene="ftsA"
                     /locus_tag="VFN38_11695"
                     /inference="COORDINATES: protein motif:HMM:TIGR01174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043093 - FtsZ-dependent cytokinesis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HET9012472.1"
                     /translation="MGRKERYLVGLDVGTSKITAIVGEVTEDGALDIVGIGLADSRGI
                     RRGVVVNLEAAVESIKKAIDEAELTAGVEIDSVHLGLSGAHVKAFNSRGVVAVAGKNR
                     EITREDVRRAIDAAKAVALPSGREILHVLPQDFVVDEQDGIGAPVGMTGTRLEVNVHV
                     VTGSASSTQNIVACVNRAGVAVIETVLEQLAASEAVLTPDEKELGVAIVDIGGGTTDF
                     AIFERGSLWHTGVVAVGGDHFTNDIAVGLRTPIPDAEKIKRRCGCALSSMVDEDETME
                     VASVGGRKPRLMARRILSEILQPRAEEIFHLLWDEIRRAGFEKSLNSGIVLTGGGAML
                     EGVAEIAEQIFDLPIRRGTPAGVGGLADHVNSPAFATAVGLVMYAHRNYGGEPARPVG
                     AGAFGRVAGRLRTLFKEFF"
     gene            complement(2013..2828)
                     /locus_tag="VFN38_11700"
     CDS             complement(2013..2828)
                     /locus_tag="VFN38_11700"
                     /inference="COORDINATES: protein motif:HMM:NF015739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsQ-type POTRA domain-containing protein"
                     /protein_id="HET9012473.1"
                     /translation="MSVKAATEKNFRRARVKPTKRRSGARALLSWRAARVVAGIVLAG
                     YAVYRAFDLVVSASTLQVRRIAVHGNVRLSAGEVQTLVDGLRGTSILTADLASYRRRL
                     LDSPWVADVALRRVLPSTVEVFVSERRPMGLSRMGAQLYLVDRSGTVIDEYGPQYAEF
                     DLPIIDGLVRPPSSGQPSIDERRAELAGRVIEAIAQRSDLAPRLSQVDVRDVHDAVIL
                     LDGDPALLHLGDDRFVERVQSYLEVAPALRERVPDIDYVDLRFEQRLYVRPGK"
     gene            complement(2825..>3024)
                     /locus_tag="VFN38_11705"
     CDS             complement(2825..>3024)
                     /locus_tag="VFN38_11705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012474.1"
                     /translation="LHVVKPLEDLPAAVARIVRRGDLVITLGAGSIGGVGERILAALR
                     GESDAAGGARDVSAGAGGEGG"
BASE COUNT          458 a         1099 c          966 g          501 t
ORIGIN      
        1 cttcggcgat gccggtgccc atcatcgcca tgcccatgcc ggccatgatc gtcttgacgt
       61 cagcgaaatc gaggttgatc aggccgggca ccaggatcag gtccgaaatc ccctgtatcg
      121 cctgccgcag cacatcgtcg gcgccggcga aggcgtcggt gagcgacgtc gtgcgcgcga
      181 ttgtggcgag cagccgctcg ttcggaatgg tgatcaccgt gtcgacacat tcgcgcagct
      241 cttccagccc ctgttcggcc tgcacctgcc gtttctttcc ctcgaagcgg aacggcttgg
      301 tcacgacggc gatcgtgagg gcgccgagct cgctggcgag gctggcgatg accggcgcgg
      361 cgccggtacc ggttccgccg ccgagcccgg tggtgacaaa caccatatcg gctccgtcga
      421 gcgcctcgat caacttttcg gtgtcttcga gggccgcctg ccgtccgacg ttcggatcgg
      481 cgcccgcgcc gagacccttg gtgagcttcg cgccaatctg gagcttgtta tgcgccgcgt
      541 tgaaccgcag cgcctgcaaa tcggtattgg cgacgatgaa ctcgacgccg tcgagcccgg
      601 ccgcgaccat gcgattcacg gcgttgctgc cgccgccgcc tacgccgacc accttgatgc
      661 gcgcgcccga gcggctctgt tcgtcgagct tcagccgcaa cgcgtcagcg ctggttgatg
      721 tcatctcggt tccgtgtgcc atgtgtcctc cgcgctgcgt ttagaagaat tccttgaaca
      781 aggtccggag ccgtccggcg acccggccga acgcccccgc gccgaccggc cgtgccggct
      841 cgccgccgta gttccgatgc gcatacatca cgagcccgac cgccgtcgcg aacgcggggc
      901 tgttgacgtg atcggcgagg ccgccgacgc ccgccggcgt cccccgccgg atgggaagat
      961 cgaaaatctg ctcggcgatt tctgccacgc cctcgagcat cgcgccgcct cccgtcagca
     1021 cgattccgga gttgagcgac ttctcgaacc cggcgcggcg gatctcgtcc cacagcaggt
     1081 ggaagatttc ttccgcgcgc ggctgcagaa tctcggacag gatccgccgc gccatcagtc
     1141 gtggcttgcg cccgcccacg ctcgccactt ccatggtttc gtcttcgtcg accatcgacg
     1201 agagcgcgca gccgcaccgc cgcttgatct tctcggcgtc gggaatgggc gtcctcaggc
     1261 cgaccgcgat gtcgttggtg aagtgatcgc cgccgaccgc gaccacgccc gtatgccaga
     1321 ggctgccgcg ctcgaagatc gcgaagtcgg tggtgcctcc tccgatgtcg acgatggcga
     1381 cgccgagctc cttttcgtcg ggggtcagca cggcttcgct ggcggcgagc tgctcgagca
     1441 ccgtctcgat gacggccacg ccggcacgat tcacgcaggc gacgatgttc tgggtggacg
     1501 aggcgctgcc cgtcacgacg tgaacgttca cctccaggcg cgtgccggtc atgccgaccg
     1561 gcgcgccgat cccgtcctgt tcgtcgacca cgaagtcctg cggcagcacg tgcaggatct
     1621 cgcggccgct cggcagcgcg accgccttcg cggcatcaat cgcgcggcgc acgtcctcgc
     1681 gcgtgatttc ccggttcttg ccggcgacgg ccacgacgcc gcggctgttg aacgccttga
     1741 cgtgtgcgcc ggacagcccc aggtgcacgg aatcgatctc gaccccggcc gtcagctccg
     1801 cttcatcgat ggctttcttg atcgattcca cggcggcttc gaggttgacc acgacgccgc
     1861 ggcggatgcc gcgcgagtcc gccagtccga tcccgacaat gtcgagagcg ccgtcttcgg
     1921 tgacctcgcc gacgatggcg gtgatcttgg acgtgcccac gtcaagcccg acgaggtagc
     1981 gttccttgcg tcccaacaga accccctttt cactacttcc ccggccttac gtacagccgc
     2041 tgctcgaatc gcaaatccac gtagtcgatg tcgggcaccc gctcccgcag cgcgggcgcg
     2101 acctcgaggt acgactgcac ccgctccacg aaccggtcgt cgccgagatg cagcagcgcg
     2161 ggatcgccgt cgagcaggat gaccgcgtcg tggacgtccc ggacgtcgac ctgggacagg
     2221 cgtggcgcga ggtccgaccg ctgggcgatc gcctcgatca cgcgcccggc cagctccgcg
     2281 cggcgctcgt cgatcgacgg ctgccccgac gagggtggcc gcacgaggcc gtcgatgatg
     2341 ggcagatcga attccgcgta ctgcggtccg tattcatcga tcacggttcc cgatcgatcc
     2401 acgaggtaca gctgggcgcc catgcgcgac agccccatcg gccgccgctc cgagacgaac
     2461 acctccacgg tggacggcag cacgcgcctg agcgccacgt cggccaccca gggcgaatcc
     2521 agcaggcgcc gccgatacga cgcgagatcc gcggtcagaa tgctggtgcc gcgcaacccg
     2581 tcgacgagcg tctgcacctc gccagccgac agccgcacgt ttccgtggac ggcgatgcgg
     2641 cgcacctgca gcgtcgaggc gctgacgacg agatcgaacg cgcggtaaac cgcatagccg
     2701 gcaagcacga tgccggcgac gacgcgcgcg gcgcgccacg acagcagcgc ccgggcgccg
     2761 ctccgccgct tcgtcggctt gacgcgcgcc cggcggaagt tcttctccgt tgcggccttg
     2821 acgctcatcc gccttcgcct cccgctccgg cggacacgtc gcgtgcgcct ccggccgcgt
     2881 ccgactcacc gcgcagcgca gcgagaatgc gctcgccgac tccgccaatc gatccggcgc
     2941 ccagcgtgat caccagatcg ccgcgtcgca caatccgcgc gacggctgcc ggcaggtcct
     3001 cgagcggttt gaccacatgc agcg
//
LOCUS       DASSYW010000734         3227 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1328213, whole genome shotgun sequence.
ACCESSION   DASSYW010000734 DASSYW010000000
VERSION     DASSYW010000734.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3227)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3227)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3227
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1328213"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1293
                     /locus_tag="VFN38_11710"
     CDS             <1..1293
                     /locus_tag="VFN38_11710"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HET9012475.1"
                     /translation="GSGLDGKHRAWTAVVMTLDPSSGVAPDAADHAVRSAESSLTPAV
                     DARATAAPNAPGAPAPDLERMGEAIDRPRSRSIEATLLTVLAVLYTLYFARGFLIPIV
                     FALLLNFLLSPLIRRMAKLHVRPPLGAAIVVTLLLAGIGWGAYQLATPAQRWAAVAPE
                     SFAKAQGKLRGIIKPMQQVSKNVEQAASAVGGPAPAGKAPEVVVQAGPSLTSRLFGTT
                     QRIVAALLEIFILLYFLLAGGDLFLQKLIKVLPTVSDKVKAVDIARATEATVSAYLTT
                     TLLVNLVEGATVALVLWLLGMPNAVLWGVIVFFLEFVPYLGAATAVVVLSVAGLTTFD
                     QLGRALLVPGSFLAINMLQSNLVTPLLLGHRLTLNPVAIFTGLAFFYWIWGVPGAFLA
                     VPLLATFKIFCDNIVSLAAIGEFLGQRDEDERRSVARV"
     gene            complement(1309..1686)
                     /locus_tag="VFN38_11715"
     CDS             complement(1309..1686)
                     /locus_tag="VFN38_11715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012476.1"
                     /translation="MPRKPPPYDDDPLAAFELPPEIMSQTLEHAIGDDATVSHELGHA
                     VAARLQQALKGSTVEYGFPGIVTVHLKSGAVARCGGPSLGWMIDVVRRPGADTDTVDV
                     DVSHDERDPARIADALVKVLRRR"
     gene            complement(1798..2337)
                     /locus_tag="VFN38_11720"
     CDS             complement(1798..2337)
                     /locus_tag="VFN38_11720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012477.1"
                     /translation="MITGHLGVAAAARSRWPTVSLAWLLPAAFAPDLLDVGYAFAGIC
                     SPYGLYSHTVPAAALAAAVLGGLAFLATGSRIGGCVVAAVVMAHLPLDLVTGFKIYWP
                     GGPLLGMYLYERPLLDFAAEAPVVLAGWWLLRRTGKGPRWASLAVTALGLVLLQGTFD
                     LLHRGLKPTGCRWSAIAEP"
     gene            complement(2334..2720)
                     /locus_tag="VFN38_11725"
     CDS             complement(2334..2720)
                     /locus_tag="VFN38_11725"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HET9012478.1"
                     /translation="MPSPASNAPTIVVAEDNAEQRSLYVALLTGVGYRVVEAADGAEA
                     VDRVRAERPGLVLMDVTMPGTSGWNAVRTLKQDIETRAIPIIVVTGLASSWDRDASMA
                     SGCDEYLAKPVSPVRLIEEVKKFLPL"
     gene            2773..>3227
                     /locus_tag="VFN38_11730"
     CDS             2773..>3227
                     /locus_tag="VFN38_11730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012479.1"
                     /translation="MRGAARRRIHRGVHRLEHLRQDLRIPVEREHDPVDDPRHVVEVH
                     VEIRFGEHAADAQLHLADPDVHARGDLHEVHRVRVERDVRAHVLHREPDGVHGQLRDL
                     EDHVAVRGQARVGRRRDALPGGTPGLGGVALGLGQRRQQQGAERHESHET"
BASE COUNT          461 a         1138 c         1130 g          498 t
ORIGIN      
        1 ggcagcggtc tggacggcaa gcatcgtgca tggaccgctg tcgtcatgac actcgatccg
       61 agctccggcg tcgcacccga cgccgccgat cacgccgtgc ggtcggcgga atcgtcgctc
      121 acgccagccg tggatgcgcg cgcgaccgcg gcgccgaatg cgccgggcgc gcccgcgccc
      181 gatctcgagc gcatgggcga ggcgatcgac cgcccgcgca gccggtcgat cgaggccacg
      241 ctgctcaccg tgctcgccgt gctgtacacg ctgtacttcg cgcgcggctt cctcatcccg
      301 atcgtgttcg cgctgctgct gaacttcctg ctcagccccc tcatccgccg catggccaag
      361 ctgcacgtgc ggccgccgct gggcgccgcg atcgtcgtga cgctgctcct ggcggggatc
      421 ggctggggtg cctatcagct cgcgacgccg gcccagcgct gggcggccgt cgcccccgag
      481 agcttcgcca aggcgcaggg caagctgcgc ggcatcatca agccgatgca gcaggtgtcc
      541 aagaacgtcg aacaggcggc gagcgccgtc gggggtcccg cccccgccgg caaggcgccg
      601 gaggtcgtgg tgcaggcggg accgagcctc acgtcgcgcc tgttcggcac cacgcagcgc
      661 atcgtcgccg cgctgctcga gatcttcatc ctgctctact tcctcctggc ggggggcgac
      721 ctctttctcc agaagctgat caaggtgctc cccaccgtga gcgacaaggt gaaggcggtg
      781 gacatcgcgc gcgccaccga ggcgacggtg tcggcctacc tcacgacgac gctgctcgtg
      841 aatctcgtgg agggcgcgac ggtggcgctc gtgctctggc tgctcggcat gccgaacgcc
      901 gtgctctggg gggtgatcgt cttctttctg gagttcgtcc cctacctcgg cgccgccacg
      961 gcggtcgtcg tgctgagcgt ggccggtctc accacgttcg atcagctcgg gcgcgcgctg
     1021 ctggtgccgg gcagcttcct ggcgatcaac atgctccagt cgaacctggt gacgccgctg
     1081 ctgctcggcc atcgcctgac gctcaatccg gtggcgatct tcaccggcct cgcgttcttc
     1141 tactggatct ggggcgtgcc cggcgccttt ctggccgtcc cgctgctggc cacgttcaag
     1201 atcttctgcg acaacatcgt gtcgctggcg gcgatcgggg agttcctcgg gcagcgcgac
     1261 gaggacgagc ggcgcagcgt cgcccgcgtg tagacgcgcg cgccggcgct accgccgccg
     1321 cagcaccttc acgagcgcgt ccgcgatgcg ggccggatcg cgctcgtcgt gcgagacgtc
     1381 cacgtccacc gtgtccgtgt ccgcgccggg acggcgcacg acgtcgatca tccagccgag
     1441 cgacgggccg ccgcagcgcg ccacggcgcc cgacttgaga tgcaccgtca cgatgccggg
     1501 aaagccgtac tccaccgtgc tccccttgag cgcctgctgg agtcgcgcgg ccacggcgtg
     1561 ccccagctcg tggctcacgg tggcgtcgtc gccgatcgcg tgctcgagcg tctggctcat
     1621 gatctccggc ggcagctcga acgcggccag gggatcgtcg tcgtagggag gcggtttgcg
     1681 tggcatcgtc gagagagacg ggagcggcgg acgaatggag cggcgcggtg ctctctccag
     1741 tatcggctcg acaggcgatt cgggcaacga cgatctgcgt cggcgcgtcc cccgacgtca
     1801 cggctcggcg atcgcgctcc accgacagcc cgtcggcttc aacccgcgat gcagcaggtc
     1861 gaaggttccc tggaggagca ccagcccgag cgcggtcacg gcgagcgagg cccagcgtgg
     1921 tcccttgccc gtgcggcgga gcagccacca gccggcgagc accacgggcg cttcggccgc
     1981 gaaatccagc agcggccgct cgtacaggta catcccgagc agtggtccgc ccggccagta
     2041 gatcttgaat ccggtcacga ggtcgagtgg caggtgcgcc atcaccacgg cggccacgac
     2101 gcacccgccg atccgcgagc ccgtggccag gaaggccagc ccgccgagca ccgcggcggc
     2161 gagcgcggcg gcggggacgg tatgcgagta gaggccgtat gggctgcata tgcccgcaaa
     2221 ggcatagccc acgtcgagca ggtcgggggc gaacgcggcg ggaaggagcc acgccagcga
     2281 gaccgtcggc cagcggctgc gtgccgccgc cgccacgccg aggtgccccg tgatcacagc
     2341 ggcaggaact tcttcacttc ctcgatgagc cggacgggag acaccggctt cgccaggtac
     2401 tcgtcacagc ccgacgccat ggacgcatcg cgatcccacg agctggccag cccggtcacg
     2461 acgatgatgg ggatcgcgcg cgtctcgatg tcctgcttga gggtacgcac ggcgttccag
     2521 ccgctggtgc ccggcatcgt gacgtccatc agcacgaggc ccggccgttc cgcccgcacg
     2581 cggtccaccg cttcggcacc gtcggccgct tccacgacgc gatagcctac gcccgtgagc
     2641 agggcgacgt agagcgagcg ttgttcggcg ttgtcttccg cgacgacgat ggtcggcgca
     2701 ttggaagccg gtgacggcat gcgggagggt cgggggtttc gataagctta cctcccgtgc
     2761 gtcggattgg ccatgcgtgg cgccgcgcgc cgccgcattc accgtggtgt ccaccgcctg
     2821 gagcacctgc gtcaggatct gcggattccg gtcgagcgtg agcacgaccc ggtcgacgat
     2881 ccgcgccacg ttgtcgaggt ccacgtagag atacgcttcg gcgagcacgc cgctgatgct
     2941 cagctgcacc ttgcggatcc cgacgtccac gcccgcggtg atctgcacga agttcatcgc
     3001 gttcgcgtcg agcgagacgt gcgcgcgcac gtcctgcacc gtgagcccga tggagtccac
     3061 ggacagctcc gggatctcga ggatcacgtc gcggttcggg gtcaggcccg cgttggccga
     3121 cggcgcgatg cgctgcccgg cgggacgccg ggtctgggcg gtgtcgcgct gggcctgggc
     3181 cagcgccggc agcagcaggg cgcagagcgc cacgagagtc atgaaac
//
LOCUS       DASSYW010000735         2497 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_429267, whole genome shotgun sequence.
ACCESSION   DASSYW010000735 DASSYW010000000
VERSION     DASSYW010000735.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2497)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2497)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2497
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_429267"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..631
                     /locus_tag="VFN38_11735"
     CDS             <1..631
                     /locus_tag="VFN38_11735"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HET9012480.1"
                     /translation="DLQPQRTVALEMGAKGLVPALGLRWDAALFEARARDELVPFDIP
                     GGNGRRYFRNAGRTVRRGGELGLQADAGPIAVQAAYTYSHFRYADYTVGTTSYAGRRI
                     PGVPEHALATTLALRRGTATFSATADVAGPMDVDDANSAQAPGRTILGLAVSNLMELG
                     RLRIVPLVALQNLGGARSVGSVSVNAAGGKFFEPAPGRTLLVRLALGRT"
     gene            702..2138
                     /locus_tag="VFN38_11740"
     CDS             702..2138
                     /locus_tag="VFN38_11740"
                     /EC_number="3.4.23.-"
                     /inference="COORDINATES: protein motif:HMM:NF025034.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="retroviral-like aspartic protease family
                     protein"
                     /protein_id="HET9012481.1"
                     /translation="MPPTIRSALVVLALGAIACRAGGVGDPGYDAAAIVEGDAATAVR
                     TDTIDDPFTVRIDRAHWVQRGRPDLSRGFWEDVAVLDVPAAEKAAKSIDEKTFVLALR
                     TLMASDPDGAAVAFGALHAQATDPDVRARARVGLTMALSWRSDWQALARIGADRDSLD
                     ALMEPSVVQAGVERWARALAAAPAAEVFVPDEPVTLPMRRSAFGTPVITVRINGRPYE
                     FWLDTGASMTLLSASVAVEAGVVLAAPDTLALGVVAGHIPARAVFVDSLGIGPVIARG
                     LSAAVVNPGALRLDRAQKNGVVEAVQIDGVIGTDLLRHLDVVLDAGEGTMTIRRPRRD
                     VRSPRNLFWVGYPVVKLVTRDGRPVLFGLDTGAEGTFVTTSLLRKLPRTPIAARRMTL
                     SGLGAGKERTQWVVREVALSDGDYAIALRNTPVTPDRRWTFVTFDGMIGSDVALATRM
                     HLDFTNGIFDVRPSAARPDGAPSVTVKQ"
     gene            complement(2122..>2497)
                     /locus_tag="VFN38_11745"
     CDS             complement(2122..>2497)
                     /locus_tag="VFN38_11745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="peptidase M28 family protein"
                     /protein_id="HET9012482.1"
                     /translation="PAQHVFALESDNGVFRPYGIAAVGTDSALAMLRRIAPLLARIGA
                     DSVERGDGEADIGPLLAAGVPGAGLHVDGTRYFWYHHSDADTPDKLDPADVAKCVATM
                     AVYAWVLAEMPERLPRGPTASR"
BASE COUNT          326 a          913 c          913 g          345 t
ORIGIN      
        1 cgacctccag ccgcagcgca ccgtcgcgct cgagatgggc gcgaagggcc tcgtgccggc
       61 gctcgggctg cggtgggacg ccgcgctctt cgaggcgcgt gcccgcgacg agctcgtgcc
      121 cttcgacata cccggcggca acgggcgccg ctatttccgc aacgccggcc ggacggttcg
      181 tcgagggggt gagctgggcc ttcaggcgga cgccggcccg atcgcggttc aagcggcata
      241 cacctactcg cacttccgct acgccgacta caccgtgggc acgacgtcgt acgccgggcg
      301 tcggattccc ggcgtccccg agcacgcgct cgccacgacg ctcgccctgc gccggggaac
      361 ggcgaccttc tcggccaccg ccgacgtcgc cggcccgatg gacgtggacg acgcgaacag
      421 cgcgcaggcg cccggccgaa caatcctggg actggcggtg tccaacctca tggagctggg
      481 gcggttgcgc atcgtgccgc tcgtcgcgct ccagaacctc ggcggcgcgc gatccgtagg
      541 gtcggtgagc gtgaatgccg ccggagggaa gttcttcgag cccgcaccgg ggcggaccct
      601 gctcgtgagg ttggcgctgg gacgcacctg agcgtccacc gccacggatg tcgctggatg
      661 caggtggcct ttcgccgtct cgggaagtct gtatgcgcag aatgcccccc accattcgat
      721 cggcgctcgt cgtcctcgcc ctcggcgcca tcgcctgccg tgccggcggt gtcggcgatc
      781 ccgggtacga cgcggcggcc atcgtggaag gcgacgccgc gaccgcggtc cgcaccgaca
      841 cgatcgacga tcccttcacc gtgcggatcg accgtgcgca ctgggtgcag cgcgggcgtc
      901 ccgacctctc gcgcggcttc tgggaggacg tggccgtgct cgacgtcccc gcggcggaga
      961 aggcggcgaa gtcgatcgac gagaagacct tcgtgctcgc gctccgcacg ctgatggcga
     1021 gcgatccgga cggcgcggcc gtcgcgttcg gggcgctgca cgcgcaggcg accgatcccg
     1081 acgtgcgcgc gcgggcgcgc gtcgggctca ccatggcgct ctcgtggcgc tccgactggc
     1141 aggcgctcgc ccgcatcggc gccgatcggg acagcctcga cgccctgatg gagcccagcg
     1201 tcgtgcaggc cggggtggag cgctgggcgc gcgcgctggc cgcggcgccg gccgccgagg
     1261 tgttcgtgcc cgacgagccg gtcacgctcc cgatgcgccg cagcgccttc ggcacgccgg
     1321 tcatcaccgt gcgcatcaac ggacgtccat acgagttctg gctcgacacc ggggcgagca
     1381 tgacgctgct ctcggcgtcg gtggcggtgg aggcgggagt ggtactcgcc gcgccggaca
     1441 ccctggcgct gggcgtcgtc gcggggcaca tcccggcgcg cgccgtgttc gtcgactcgc
     1501 tcggcatcgg gcccgtgatc gcgcgcggcc tgagcgcggc ggtcgtgaac ccgggcgcgc
     1561 tgcggctgga tcgcgcgcag aagaacggcg tcgtggaggc ggtgcagatc gacggcgtga
     1621 tcggcaccga cctgctgcga cacctggacg tcgtgctcga tgcaggggaa ggcacgatga
     1681 cgatccgccg tccgcggcgc gacgtccgct cgccgcgcaa cctgttctgg gtcggctacc
     1741 cggtggtgaa gctcgtcacg cgcgacggcc gccccgtgct cttcgggctc gacacggggg
     1801 ccgagggcac cttcgtcacc acgtcgctgc tgcggaagct gccgcgcacg cccatcgcgg
     1861 cgcgccggat gaccctcagc ggcctgggcg cggggaagga gcggacgcag tgggtggtgc
     1921 gcgaggtcgc gctgagcgac ggcgactacg cgatcgcgct ccgcaacacg ccggtcaccc
     1981 ccgatcgccg ctggaccttc gtgacgttcg acggcatgat cggcagcgac gtcgcgctgg
     2041 cgacgcgcat gcacctcgac ttcaccaacg gcatcttcga cgtgcgtccg agcgccgccc
     2101 ggccggacgg cgcccccagc gtcaccgtga agcagtaggc ccgcggggca gtcgctcggg
     2161 catctcggcc agcacccagg cgtacaccgc catcgtcgcc acgcacttcg ccacgtccgc
     2221 cggatccagc ttgtccggcg tgtcggcgtc cgagtggtgg taccagaagt agcgcgtgcc
     2281 gtccacgtgc agccccgcgc cgggcacgcc ggccgcgagc agcggtccga tgtcggcctc
     2341 gccgtcgccg cgctccaccg agtcggcgcc gatccgcgcg agcagcggcg cgatgcgccg
     2401 cagcatcgcg agcgcggagt cggtccccac cgccgcgatg ccgtagggac ggaacacccc
     2461 gttgtccgac tcgagcgcga agacgtgctg cgcggga
//
LOCUS       DASSYW010000736         2561 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1406868, whole genome shotgun sequence.
ACCESSION   DASSYW010000736 DASSYW010000000
VERSION     DASSYW010000736.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2561)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2561)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2561
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1406868"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..539)
                     /locus_tag="VFN38_11750"
     CDS             complement(<1..539)
                     /locus_tag="VFN38_11750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012483.1"
                     /translation="MQASQNLVGVRRIGTDGESELDGRQLRHRAQKISRPAAVAGQDG
                     AQELRGFRDPPADDRLPGGFHPVAARDAHAAIGHAKSGCRHDERGGVSGRHLGHERAL
                     RCDPFARRSVERHQSVVEQRGVSRCEDRAGKPLRCRAAAKHDVHPDRGRQRERNRLGG
                     GWRVGLLFAFEMRDQGAKRP"
     gene            573..2375
                     /locus_tag="VFN38_11755"
     CDS             573..2375
                     /locus_tag="VFN38_11755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012484.1"
                     /translation="MDERTLWRPRRDPALLVADLAVDDRGAPYIPGSRPFWTAVFSDN
                     ADEGTRSRGAALAGGPPDFSWVSDQVFSGTPAEQGRRYEAVLFASRVVRDLTAATASD
                     AVEAVRSALEYPALAAILERARVSRVATYALAGRRAAHVSAAARVERGIVGLSQFQGT
                     TAVLARMVSQGSITPDAFDAAVTSLSQLEEDHGNYNGALVRWFAGWVKSMKPKMDVDE
                     ALLQLLSGPSPAVPRSVDWEGTRYTVDLSAAESMRLARLLGDAPHPYLSAAAALAGSA
                     ADSAWARGVVDLAYAIALGQPEQAAISIGDVARRHDLGERADPTRTFGPWTIPVADVS
                     AHGYRIGGALLGLEQALAEFSITRVSLKTPPRRPSLRNEDRGVFIATVPLVQPAFLSD
                     ADRDSIGHAIRTGRARVAAVRSSADADALSQSIPLGPIRRTVFPWIVAHDAARAASFF
                     SPVELLWLGLGNTPAGESLHGWGVSAYPRLGCLCLRVDRRSADLLTGRMNAGMLATGM
                     PDLGLRLAELLADLHMPAALLGGVLASATFDFVNGAASRDDNDRRGLVEFVLALRPDR
                     VEEYLGMLTTGGPLVPPRTDADRLPGPSPGGRRP"
     gene            2372..>2561
                     /locus_tag="VFN38_11760"
     CDS             2372..>2561
                     /locus_tag="VFN38_11760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012485.1"
                     /translation="MKLAWAGALAAAAAVVSLAAGVQDRAIRITYPPADSIVSGATRI
                     EATITPAALIPQVVSVVFY"
BASE COUNT          342 a          885 c          903 g          431 t
ORIGIN      
        1 ggccgcttcg cgccctggtc gcgcatctcg aacgcgaaca gcaggccaac ccgccatccg
       61 ccgccgagac ggttccgctc ccgctgacgc ccacgatctg gatggacatc gtgtttggcg
      121 gccgcacgac atcggagggg cttgccggcg cgatcctcgc atctcgaaac gcctcgctgt
      181 tctactacgg attgatgtcg ctcgacggag cgacgcgcga atggatcgca acgcagcgca
      241 cgctcgtgtc cgaggtggcg acccgacacg ccgccgcgtt cgtcgtggcg gcacccggat
      301 ttcgcgtggc cgatggccgc gtgcgcgtcc cgggcggcga ccggatggaa tccgcctggg
      361 aggcgatcat cggccggcgg gtcacggaac ccgcggagtt cctgcgcgcc gtcttgaccg
      421 gcgacagcgg ccggacggga tattttctga gcgcgatgtc ggagctgtcg cccgtccagt
      481 tcggattcac cgtcggtgcc gatccggcga accccgacaa ggttctgcga cgcctgcacg
      541 cggtgttcga gcgggtgaac gccggctggc gagtggacga gcggacgctg tggcgtccgc
      601 ggcgcgatcc cgcactgctc gtggcggatc tggcggtcga cgatcgcggc gcgccctaca
      661 ttccgggttc gcgtccgttc tggaccgcgg tgttctcgga caatgccgac gagggaacgc
      721 gcagccgggg cgcagcgctc gctggcgggc cgccggactt ctcctgggta tccgatcagg
      781 tgttctccgg cacgccggca gagcaggggc gccgctatga agcggtactc ttcgcatcgc
      841 gggtcgtgag agatctgacg gcggcgacgg cttccgatgc cgtggaggca gtgcgctccg
      901 cgctggagta cccggctttg gcggcgatcc tcgaacgcgc tcgcgtcagc agggtcgcca
      961 cctacgccct cgccggccgc cgcgccgcgc acgtgtccgc cgccgcgcgc gtcgagcgcg
     1021 gcattgtcgg gctgtcgcag tttcagggaa cgaccgcagt gctcgcgcgc atggtgtcgc
     1081 agggcagcat cacgccggac gcgttcgacg ccgcggtgac ctcgttgtcg cagctcgaag
     1141 aggaccacgg gaactacaac ggcgcgctcg tccgctggtt tgccggctgg gtcaagtcga
     1201 tgaagccgaa gatggacgtc gacgaggcgc tgctgcagct gctgtccggt ccatcgccag
     1261 ccgttccgcg gtccgtggat tgggaaggga cgcggtacac ggtcgatctc agtgccgccg
     1321 agagcatgcg gctggcgcgg ctgctcggcg acgctccgca tccttacttg tctgcggccg
     1381 ctgccctggc gggcagcgcg gcagacagcg cgtgggcgcg aggcgtcgtg gacctcgcct
     1441 acgcgatcgc gctcggacag ccggagcagg cggccatctc gatcggcgac gtcgcgcgcc
     1501 gtcacgacct cggcgagcgg gccgacccaa cgcgcacttt tggtccgtgg acgattccgg
     1561 tcgccgatgt cagcgcgcac ggataccgca ttggcggcgc gcttctcggg ctcgagcagg
     1621 cgctcgcgga gttttccatc actcgtgtct cgctgaaaac gccaccgcgg aggccttcgc
     1681 tccgcaacga agatcgcggg gtcttcatcg cgaccgtgcc gctcgtccag ccggccttcc
     1741 tctcagacgc cgatcgcgat tcgatcgggc atgcgattcg taccgggcgt gctcgtgtgg
     1801 cggccgtccg ttcgagcgcc gacgccgacg ccctgtcgca atcgataccc ctggggccga
     1861 tccgccgcac cgtgttcccg tggatcgtcg cgcacgacgc cgcgcgagcc gcgtcgtttt
     1921 tctcccccgt cgagctgttg tggctcggcc tcgggaacac cccggccggc gagtcgctgc
     1981 acgggtgggg cgtgtccgca tacccccgcc tcggatgcct gtgcctgcgg gtcgacaggc
     2041 gatcggccga tctgttgacc ggccgcatga atgcgggaat gctggcgacc ggcatgccgg
     2101 acctcgggtt gcgcctcgcg gaactgctgg cggatctgca catgcccgcc gcgctgctcg
     2161 gcggcgtgct cgcgtccgcg acgttcgact tcgtgaatgg tgccgcgagc cgcgacgaca
     2221 acgatcggcg cggcctcgtg gaatttgtgc tggcgcttcg acccgatcgc gtggaagagt
     2281 atctcggaat gttgacgacc ggcggcccgc tcgtgccgcc gcgcaccgat gcagaccggt
     2341 tgccggggcc atccccggga gggagacgac catgaagctc gcatgggccg gcgcgctcgc
     2401 cgcggccgcc gctgtcgtgt cgctcgccgc aggcgtccag gatcgcgcca tccggatcac
     2461 ctatcctcct gcggactcga tcgtgagcgg ggcgacccgc atcgaggcga cgatcactcc
     2521 agcggctctc ataccgcagg tggtgtccgt cgtgttctat g
//
LOCUS       DASSYW010000737         2297 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_654303, whole genome shotgun sequence.
ACCESSION   DASSYW010000737 DASSYW010000000
VERSION     DASSYW010000737.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2297)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2297)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2297
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_654303"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1198
                     /locus_tag="VFN38_11765"
     CDS             <1..1198
                     /locus_tag="VFN38_11765"
                     /inference="COORDINATES: protein motif:HMM:NF013086.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HET9012486.1"
                     /translation="NSWEYTGDGHALAYFAGAALQDMEFVQFHPTGMIWPPSVRGILV
                     TEGVRGEGGVLRNRDGRRFMFDNIPDNYKAQTADNEEEGWRYTQGDKDARRPPELLTR
                     DHVARMIVREVKEGRGSPHGGVYLDISWIRERLPNAAEHIRKKLPSMYHQFMQLAGID
                     ITKEAMEIGPTTHYIMGGIRVDGDTQMSTVPGLFACGECAAGLHGANRLGGNSLSDLL
                     VFGKRAGEHAARFAKESAPVTVDAGEADEAASRALAPFSRPSGREGPYQVQEALQTTM
                     QNHVGIVRTEHEMERALGEIAALQRRADQVVVPGNREFNPGWHTALDLPNLLIVSEAI
                     ARSALARRESRGGHFRDDFPEKDPAYASFNLVTRAGPDGSMQVEREGIPTLPDELAAI
                     IKEMQG"
     gene            1195..2019
                     /locus_tag="VFN38_11770"
     CDS             1195..2019
                     /locus_tag="VFN38_11770"
                     /inference="COORDINATES: protein motif:HMM:NF009052.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase/fumarate reductase
                     iron-sulfur subunit"
                     /protein_id="HET9012487.1"
                     /translation="MTAPAAPAVDAYTAAQAAQDEAVLHGSRSFRLWRGADGVGAFQE
                     YATEVNEGMVVLDAVQQIQAEQANDLAVRWNCKAGKCGSCSAEINGKPRLMCMTRLDD
                     LPVDEPVTVEPMRAFPHVRDLVTDVSWNFRVKPRIQPFTPRAPDAPDGTWRIDQRDVE
                     RVQEFRKCIECFLCQDVCHVLRDHHLHDEFVGPRFLVYAAALEMHPLDVADRTTELKE
                     QFGIGYCNITKCCTKVCPEGITITDNAIIPLKERVVDRHYDPLGALVRLVRGPRKH"
     gene            2046..>2297
                     /locus_tag="VFN38_11775"
     CDS             2046..>2297
                     /locus_tag="VFN38_11775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012488.1"
                     /translation="MTELKKISREAIPRAAHKAERYRLLNQSWATESICLDILEVDPT
                     NQQVIVMLLLALTDQFAAETFDLTRRSQSLLARITDPYQR"
BASE COUNT          392 a          824 c          774 g          307 t
ORIGIN      
        1 caacagctgg gagtacaccg gcgacggcca cgcgctcgcg tacttcgccg gggcggcgct
       61 gcaggacatg gagttcgtcc agttccatcc caccgggatg atctggccgc cgagcgtgcg
      121 tggcatcctc gtcaccgaag gcgtgcgcgg cgagggcggc gtgctgcgga accgtgacgg
      181 ccggcggttc atgttcgaca acatccccga caactacaag gcgcagaccg cggacaacga
      241 agaggagggc tggcgctata cccaggggga caaggacgcg cgccgtcccc ccgagctcct
      301 cacgcgcgat cacgtggccc gcatgatcgt gcgcgaggtg aaggaggggc gcggctcgcc
      361 gcacggcggg gtctacctcg acatctcgtg gatacgcgag cggctcccca atgccgcgga
      421 gcacatccgg aagaagctgc cgagcatgta ccaccagttc atgcagctcg cggggatcga
      481 catcacgaag gaggcgatgg agatcggccc cacgacgcac tacatcatgg gcggcatccg
      541 cgtggacggc gacacccaga tgtccacggt gcccgggctc ttcgcctgcg gcgagtgcgc
      601 ggccggcctg cacggggcca accgcctcgg cggcaactcg ctctccgacc tcctcgtgtt
      661 cggcaagcgc gccggggagc acgccgcccg cttcgcgaag gagagtgcgc ccgtcacggt
      721 ggacgccggt gaggccgacg aggcggcgag ccgcgcgctg gcgcccttca gccgcccgag
      781 cggacgcgaa gggccgtacc aggtgcagga ggcgctgcag acgacgatgc agaaccacgt
      841 gggcatcgtg cgcaccgagc acgagatgga gcgcgccctc ggcgagatcg ccgcgctgca
      901 gcggcgcgcc gaccaggtcg tcgtgcccgg caaccgcgag ttcaatccgg gctggcacac
      961 cgcgctcgac ctgccgaacc tgctcatcgt gtcggaggcg atcgcccgct cggcgctcgc
     1021 ccgccgcgag agccgcggcg ggcactttcg cgacgacttc cccgaaaagg accccgcgta
     1081 cgcgagcttt aacctcgtca cgcgcgccgg ccccgacggg tccatgcagg tggagcggga
     1141 ggggattccc accctccccg acgagctggc cgccatcatc aaggagatgc agggatgacc
     1201 gctcccgccg ctcccgccgt cgatgcctac accgccgcgc aggcggccca ggacgaggcc
     1261 gtcctccatg ggtcgcgcag cttccgcctc tggcgcggcg ccgacggcgt gggcgcgttc
     1321 caggagtacg ccaccgaggt caacgagggg atggtcgtgc tcgacgccgt gcagcagatc
     1381 caggcggagc aggccaacga cctcgcggtc cgctggaact gcaaggccgg gaagtgcggc
     1441 tcctgctccg ccgagatcaa cggcaagccc aggctgatgt gcatgacacg gctcgacgac
     1501 ctgcccgtgg acgagccggt gacggtggag ccgatgcgcg cctttccgca cgtccgcgac
     1561 ctcgtcaccg acgtctcgtg gaacttccgc gtcaagccgc gcatccagcc cttcaccccg
     1621 cgcgcccccg acgcccccga cggcacctgg cgcatcgacc agcgcgacgt ggagcgcgtc
     1681 caggagttcc ggaagtgcat cgagtgcttc ctctgccagg acgtctgcca cgtcctgcgc
     1741 gaccaccatc tgcacgacga gttcgtgggc ccgcgcttcc tcgtctacgc tgcggcgctg
     1801 gagatgcatc cgctcgacgt cgccgaccgg accacggagc tcaaggagca gttcggcatc
     1861 ggttactgca acatcacgaa gtgctgcacc aaggtgtgcc cggaagggat caccatcacg
     1921 gacaacgcca tcatcccgct caaggagcgc gtggtggacc ggcactacga tccgctgggg
     1981 gcgctcgtgc gcctcgtgcg cgggccgagg aagcactaga cgccgcgtgc gtcagggaga
     2041 cgacgatgac ggagctcaag aagatctcgc gcgaggcgat cccgcgcgcc gcgcacaagg
     2101 cggagcgcta tcgcctcctc aaccagtcgt gggccaccga gagcatctgc ctcgacatcc
     2161 tcgaggtgga tccgacgaac cagcaggtca tcgtcatgct cctgctggcg ctcacggacc
     2221 agttcgcggc ggagaccttc gacctgaccc gccgatcgca gtcgctgctc gcccgcatca
     2281 ccgatccgta ccagcgc
//
LOCUS       DASSYW010000738         2534 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1106285, whole genome shotgun sequence.
ACCESSION   DASSYW010000738 DASSYW010000000
VERSION     DASSYW010000738.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2534)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2534)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2534
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1106285"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..253
                     /locus_tag="VFN38_11780"
     CDS             <1..253
                     /locus_tag="VFN38_11780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012489.1"
                     /translation="DSASIRTAARWLDSLKEEHPVELPAPRRIVREVPVERAQPAQRE
                     VPSITEDPFFIPGSPTPRRDTTVPRDTLRRPDTTTPPPA"
     gene            complement(281..622)
                     /locus_tag="VFN38_11785"
     CDS             complement(281..622)
                     /locus_tag="VFN38_11785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012490.1"
                     /translation="MIFVMVVAGAMAALTWLLGWWGVLLAALIVGWVFREEGGGGWRV
                     ALAAALAWGLLLVLDAVLGSFATVARTIGGVLGLPAYLPVLLTLAFPALLGWSAATVA
                     AETRRIRRRRP"
     gene            complement(633..>2534)
                     /locus_tag="VFN38_11790"
     CDS             complement(633..>2534)
                     /locus_tag="VFN38_11790"
                     /EC_number="3.5.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013927.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016811 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in linear amides
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin acylase family protein"
                     /protein_id="HET9012491.1"
                     /translation="WTLAYLALEDDRAAAASRVGARAAEALFPDDLPLQEPIQPNGQR
                     APRLDARPLPPPGAPDSGSARLLAAADAFFPSGARERADGDEPSSMASNNWAVSPRRS
                     ASGHALLSGDPHLDLTLPSIWYEAHLVVPGALDVYGVTIPGSAAIIIGFNRDVAWTFT
                     NTGADVLDLYAEQVDDATHPARYRLDGAWKALERRVERYRGARGEVVATDTLYFTHRG
                     PMRRVGAQWLSMRWTVLEAGRELDGFYGASHARSAVELEEGFTAWYRAPAQNMLAADR
                     GGHIAIRSTGRFPLRPGDGTGAVVRDGSTSASDWTGAIPPARDPRAMDPAQGYLASAN
                     QQPMDPRVATDWWGGRYDPWRAMRINTLLRADSAVTVDAMRRYQTDPGSARADLFVPY
                     FLAAAQRVLARATMDTDMARVAEAAGLLGEWDRRYTKDNRRAVLFEGAMQELVARTWD
                     ELVKPGTSRPIVTPSGAVLARLLADSASAWWDDRSTATVERRDDILAASLAASLAAAR
                     KKYGDPAGDGWRWDRIRHANVHHLLRLPALSALDIPVQGGPGTLAPSAGSGTHSASWR
                     MVVELGPELRAWATYPGGQSGNPLSARYRDRLAQWERGELDAVRLPASPAQLELGHRS
                     ATLTLRPAP"
BASE COUNT          344 a          963 c          921 g          306 t
ORIGIN      
        1 ggactccgcg agcatccgga cggctgcacg gtggctcgac tcgctcaagg aagaacaccc
       61 cgtcgagctg cccgcgccgc ggcggatcgt gcgtgaggtc ccggtggagc gggcgcagcc
      121 cgctcaacgc gaggtgccgt cgatcaccga ggacccgttc ttcatccccg gctcgcccac
      181 accgaggcgc gacaccaccg taccgcgcga caccctgcgg cggcccgaca cgacgacgcc
      241 gccgccggcc tgacgcgacc gggcccgccg cccggcgcga ctacgggcgg cggcggcgga
      301 tccgccgcgt ctccgccgca acggtggccg cgctccatcc cagcagcgcc gggaatgcga
      361 gggtgagcag caccggcagg taggcaggca gccccagcac gccaccgatc gttcgcgcca
      421 ccgtggcgaa tgacccgagg acggcgtcga ggacgagcag caggccccac gcgagggccg
      481 ccgcgagagc gacgcgccac ccgccccccc cttcctcgcg gaagacccag cccacgatca
      541 acgcggcgag caggactccc caccagccga gcagccaggt gagcgcggcc atcgcgccag
      601 ccaccaccat gacgaagatc atcggcggct cctcatggtg cgggacggag cgtcagggtc
      661 gcggagcgat gccccaactc gagctgcgcc ggtgaggcgg gcaggcgcac cgcgtccagc
      721 tcgccgcgct cccactgcgc caggcggtcg cggtagcggg cgctcagcgg attccccgac
      781 tgcccgcccg gatacgtggc ccacgcacgc agctccggcc ccagctcgac gaccatccgc
      841 cagctcgcgc tgtgcgttcc cgatcccgcc gatggtgcca gcgtccccgg tcctccctgc
      901 accgggatgt ccagcgccga cagcgcgggc agccgaagca ggtggtgcac gttcgcgtgt
      961 cggatgcggt cccaccgcca gccgtcgccc gcgggatcgc cgtacttctt ccgcgcggcc
     1021 gccagcgatg cggcgaggct cgcggcgagg atgtcgtcgc ggcgctccac cgtcgcggtg
     1081 gaccggtcgt cccaccacgc gctggcggaa tcggcgagca gccgggcgag caccgcaccg
     1141 gatggcgtga cgatggggcg cgacgtgccc ggcttcacca gctcgtccca ggtgcgcgcc
     1201 accagctcct gcatggcgcc ctcgaacagc acggcgcggc ggttgtcctt cgtgtaccgg
     1261 cggtcccact cgcccagcag ccccgcggct tcggcgacgc gcgccatgtc ggtgtccatc
     1321 gtcgcgcgcg cgagcacgcg ctgcgcggcg gcgagaaagt agggcacgaa caggtcggcg
     1381 cgcgcgcttc cgggatcggt ctggtagcgg cgcatcgcgt cgacggtcac ggcggaatcg
     1441 gcgcgcagca gcgtgttgat gcgcatcgcg cgccaggggt cgtagcggcc gccccaccaa
     1501 tcggtcgcga cgcgcgggtc catcggctgc tggttcgccg aggcgaggta gccctgcgcg
     1561 ggatccatcg cccgtggatc ccgcgccggc gggatggcgc ccgtccagtc gctggcgctc
     1621 gtggatccgt cgcgcacgac ggcgcccgtt ccatcgccgg ggcgaagggg aaaccggcca
     1681 gtcgagcgga tggcgatgtg tcccccgcgg tcggcggcga gcatgttctg ggcgggggcg
     1741 cggtaccagg ccgtgaaccc ctcctccagc tcgacggcgc tgcgcgcgtg ggacgcgccg
     1801 tagaagccgt ccagctccct ccctgcctcg agcacggtcc agcgcatcga cagccactgc
     1861 gcgcccacgc ggcgcatcgg tccccggtgc gtgaagtaca gggtgtcggt ggccaccacc
     1921 tcgccgcgcg cgccgcgata gcgctcgacc cggcgctcca gcgccttcca cgctccgtcc
     1981 agccggtacc gcgccggatg cgtcgcgtcg tccacctgct ccgcgtacag gtcgagcacg
     2041 tcggcgccgg tgttggtgaa ggtccacgcg acatcgcggt tgaagccgat gatgatggcc
     2101 gccgagccgg ggatcgtcac gccgtacacg tcgagcgcgc cgggcacgac gagatgcgcc
     2161 tcgtaccaga tggacggcag ggtgaggtcg aggtgcggat cgcccgagag cagcgcgtgc
     2221 ccgctggccg agcggcgcgg cgacaccgcc cagttgttgc tcgccatcga ggaaggctcg
     2281 tcgccgtcgg cgcgctcccg cgcgccgctc gggaagaagg catccgccgc ggccagtagc
     2341 cgcgcgctgc cgctgtcggg cgcgccgggt ggcggcagcg gccgtgcgtc gagccgcggc
     2401 gcgcgctggc cgttcggctg gatcggctcc tggagtggca ggtcgtccgg gaagagcgcc
     2461 tcggccgcgc gggcccccac gcgcgaggcc gcggccgcgc ggtcgtcctc cagggcgaga
     2521 tacgcgagcg tcca
//
LOCUS       DASSYW010000739         2444 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1812080, whole genome shotgun sequence.
ACCESSION   DASSYW010000739 DASSYW010000000
VERSION     DASSYW010000739.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2444)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2444)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2444
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1812080"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2111)
                     /locus_tag="VFN38_11795"
     CDS             complement(<1..2111)
                     /locus_tag="VFN38_11795"
                     /inference="COORDINATES: protein motif:HMM:NF039587.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5916 domain-containing protein"
                     /protein_id="HET9012492.1"
                     /translation="MPQRFSLLVPTRFAAALTLLLAPGARGQATIPATVVASTGVPAP
                     SGATYGGKASATAARASRVTTPPVLDGRSDDAAWAGAQVIEDFLEYDPNEGKVSRFRT
                     EVRVAYDDRYLYVLGRMYDPAPDSIISLLSRRDVRTSSEQLKLVIDSYNDKKTAFQFI
                     TNPAGVKRDYYVSNDNNEDPSWDAVWDVATKIDSVGWVAEFRIPFSQIRYAPGDEHTF
                     GLIVVRDVARTGERISWPLIKRNVQGYVSQAGSLGGIGRLPTPRRLELLPYTVVKNDT
                     RDFGEGRAGGLARYDHPSKLTAGVDLKYGLSSNLTLDATINPDFGQVEADPAQLNLTA
                     FETFFEERRPFFLEGAGIFTFNTNCGDIDSGCTGLFYSRRVGRNPQLADYYGDPTSAT
                     ATPIAAATKLTGRLANGFSIGLLEAVTQRVDGVTPLGGQLPAIEPRTNYGVLRIQRDQ
                     GDGQGDMGLMLTAVNRSLDPGGAPYLRDAAYTGGLDLRRRFPSNNYEIRSFIARSDVR
                     GTPEAIAALQRNTVHAYQRPDDDIAYDPTRTRLVGDAERISVSKFGGGVTRFQTVYQR
                     FSPGFESNDIGYQRRADEQMFRNWFALQFQKPTKYYQRAFFNFNAQERWTTQGLVLGN
                     GLNQNSHVQLPNFMWAHLGFNYDEFMTAYSDRDARGGPAVRISPNRSVWAGIESDSRP
                     AVTGSVWWGAWRGDEGRSWNA"
BASE COUNT          338 a          795 c          898 g          413 t
ORIGIN      
        1 taggcgttcc aggaacgtcc ctcgtcgccg cgccaggcgc cccaccagac gctgcccgtc
       61 actgcgggcc ggctgtcgct ctcgatgccc gcccagacgc tccggttggg cgagatgcgc
      121 accgccggtc cgccgcgcgc gtcacggtcg ctgtaggcgg tcatgaactc gtcgtagttg
      181 aagccgaggt gcgcccacat gaagttgggc agctggacgt gcgagttctg gttcaacccg
      241 ttgccgagca cgagcccctg ggtggtccag cgctcctgcg cgttgaagtt gaagaaggcg
      301 cgctggtagt acttcgtcgg cttctggaac tggagggcga accagttgcg gaacatctgc
      361 tcgtccgcac ggcgctggta gccgatgtcg ttggactcga agccgggcga gaagcgctgg
      421 tacacggtct ggaatcgcgt caccccgccg ccgaacttgc tcaccgagat ccgctcggcg
      481 tcgcccacga ggcgggtacg cgtcgggtcg taggcgatgt cgtcgtcggg gcgctggtag
      541 gcgtgcacgg tattgcgctg cagcgcggcg atcgcctccg gggtgccgcg cacgtcgctc
      601 cgggcgatga acgagcggat ctcgtagttg ttgctcggga agcgccggcg caggtcgagc
      661 ccgccggtat aggcggcgtc gcgcaggtat ggcgcgcctc cggggtcgag cgagcggttc
      721 acggcggtga gcatgagccc catgtcgccc tggccgtcgc cctggtcgcg ctggatgcgg
      781 aggacgccgt agttggtgcg cggctcgatg gccgggagct ggccgccgag cggcgtcacg
      841 ccgtcgacgc gttgggtcac cgcctcgagg aggccgatgg agaagccgtt ggcgaggcgg
      901 ccggtgagct tggtcgccgc ggcgatcggc gtcgccgtcg cgctggtggg gtcgccgtag
      961 tagtcggcga gctgcgggtt gcggccgacg cggcgcgagt agaacaggcc ggtgcacccg
     1021 ctgtcgatgt cgccgcagtt cgtgttgaag gtgaagatgc cggcgccctc gaggaagaag
     1081 gggcggcgct cctcgaagaa ggtctcgaac gcggtgaggt tgagctgggc ggggtcggcc
     1141 tccacctgtc cgaagtcggg gttgatcgtc gcgtccaggg tgaggttgga cgagagcccg
     1201 tacttgaggt ccacccccgc cgtcagcttg ctcgggtggt cgtagcgcgc gagcccgccg
     1261 gcgcgcccct cgccgaagtc gcgggtgtcg ttcttgacca ccgtgtacgg cagcagctcc
     1321 agccgccgcg gcgtcggcag gcgcccgatg ccgcccagtg agccggcctg cgacacgtac
     1381 ccctgcacgt tgcgcttgat gagcggccac gagatgcgct cgccggtgcg ggcgacgtcg
     1441 cgcacgacga tgagaccgaa ggtgtgctcg tcaccggggg catagcggat ctggctgaac
     1501 gggatacgga actccgccac ccatccgacg gaatcgatct tcgtcgcgac gtcccacacc
     1561 gcgtcccacg acggatcctc gttgttgtcg ttcgagacgt agtagtcccg cttcacgccg
     1621 gccgggttgg tgatgaactg gaaggccgtc ttcttgtcgt tgtacgagtc gatcacgagc
     1681 ttgagctgct cggagctcgt gcgcacgtcg cgccgcgaca ggagcgagat gatgctgtcg
     1741 ggcgcggggt cgtacatgcg ccccagcacg tagaggtagc ggtcgtcgta cgcgacccgc
     1801 acctccgtcc tgaagcgcga gaccttgcct tcgttgggat cgtactccag gaagtcctcg
     1861 atcacctgtg cgcctgccca cgcggcgtcg tcgctgcggc cgtcgaggac gggcggcgtc
     1921 gtgacgcgcg acgcccgcgc cgccgtcgcg ctggccttgc cgccgtaggt ggcgccgctc
     1981 ggcgcgggga cgcccgtgct ggcgacgacg gtggccggga tggtcgcctg gccgcgtgcc
     2041 cccggcgcga gcagcagggt cagggcggcg gcgaatcgcg ttgggacgag cagactgaat
     2101 cgctgtggca tgacacggtc cggtgggggt gtcacggggg tggatggcgc atccgcccgc
     2161 gcggcacgag tgcacgatct gagacaacag gtggcggcga ttggttggaa cgggctgcct
     2221 cgcgcggcgc cgcaccatcc gttcgtgcgt gactcccctg tcgtacgagc gacgacggac
     2281 cgcggtttcc cgctcgtccc gcgatccgcg cggctcgtca catcgcgtgc cctaccggtt
     2341 acctttgtgc catgcgtcgc acactctgca aatccaagat ccatcgcgcc acgctcactg
     2401 gcgccgatct ccactacgaa ggcagcctca ccgttgaccg ggcg
//
LOCUS       DASSYW010000740         3025 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1165038, whole genome shotgun sequence.
ACCESSION   DASSYW010000740 DASSYW010000000
VERSION     DASSYW010000740.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3025)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3025)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3025
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1165038"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2721
                     /gene="gcvP"
                     /locus_tag="VFN38_11800"
     CDS             <1..2721
                     /gene="gcvP"
                     /locus_tag="VFN38_11800"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004375 - glycine dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase"
                     /protein_id="HET9012493.1"
                     /translation="AGRSEHEALAAMGAIARKNRIFRSFLGYGYHDTITPPVIQRNIL
                     ENPGWYTAYTPYQAEIAQGRLEALLNFQTMVIDLTGLEIANASLLDEGTAAGEAMFMS
                     FQAKGSEARKTFFIDARCHPQTIAVVETRAHARGIDTLVGDAATATFGGTIFGALLSY
                     PTTDGAVLDYRAVAERVHDAGGLVIVATDLMSLVLLTPPGEWGADVCVGNTQRFGVPM
                     GYGGPHAAFFATRDEFKRTLPGRIIGVSRDAAGRPALRMALQTREQHIRREKATSNVC
                     TAQVLLAVIAGMYAVWHGPEGLRAIARRIHRHAAVLAAGLEQLGHTLASGDYFDTLCV
                     ELAGGTADDVVAAAAARQINLRRAGEQRVIVALDETVTEDDVQALLTIFAAGQPAPET
                     GGLAAEVDDRFDERFARTSAFLTHPVFNTHHSETEMLRYMRTLESRDLSLTHSMIPLG
                     SCTMKLNATAEMIPITWPEFGKLHPFAPVDQAQGYQELFRNLEGALAEITGFHAVSLQ
                     PNAGSQGEYAGLLTIAAYHRARGQGHRTVCLIPQSAHGTNPASAVMAGMTVVVTKTDA
                     RGNIDVADLRAKAEANADKLAALMVTYPSTHGVFEESIREICAIVHQHGGQVYMDGAN
                     MNAMVGLCRPGDIGADVCHLNLHKTFCIPHGGGGPGMGPIGVAKQLAPFLPGNPVVRT
                     GGDQAAGAVSAAPWGSASILPISMMYIDMMGGEGLAYATKVAILNANYVAARLDPHYP
                     VLYKGANGRVAHECIVDPRALKGSAGIEVEDITKRLMDYGFHAPTVSFPVAGTLMIEP
                     TESEPKAELDRFCDALIAIREEVRAIERGTADREDNPLKHAPHTMRAVVSDRWEHRYG
                     REEAAFPAPWTRERKFWPTVGRIESAYGDRHLVCSCLPTDAYAEDVAGEA"
     gene            complement(2842..>3025)
                     /locus_tag="VFN38_11805"
     CDS             complement(2842..>3025)
                     /locus_tag="VFN38_11805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycine cleavage system protein H"
                     /protein_id="HET9012494.1"
                     /translation="ELYAPVSGEVVEINSRLDGEPALVNSSPYGDGWMIRMKLADESE
                     KSGLLDAAAYKAKTGQ"
BASE COUNT          479 a         1046 c         1089 g          411 t
ORIGIN      
        1 gccggccgca gcgagcacga ggcgctcgcg gccatgggcg cgatcgcgcg gaagaaccgg
       61 atcttccgct ccttcctcgg ctacggctac cacgacacga tcaccccgcc ggtgatccag
      121 cggaacatcc tggagaatcc cggctggtac acggcgtaca cgccctacca ggcggagatc
      181 gcacaggggc ggctcgaggc gctgctgaac ttccagacga tggtcatcga cctgaccggg
      241 ctggagatcg ccaacgcctc gctgctcgac gaggggacgg cggcggggga ggcgatgttc
      301 atgtcgttcc aggccaaggg atcggaggcg cggaagacct tcttcatcga cgcgcgctgc
      361 catccgcaga cgatcgccgt ggtggagacg cgggcgcacg cgcgcgggat cgacacgctg
      421 gtgggcgatg cggcgacggc gaccttcggc ggcacgatct tcggcgcgct gctgtcgtat
      481 ccgaccaccg acggcgcggt gctcgactac cgcgcggtgg cggagcgggt gcacgacgcg
      541 ggagggctcg tcatcgtggc gaccgacctg atgagcctcg tgctgctcac gccgcccggc
      601 gagtggggag ccgacgtctg cgtcggcaac acgcagcggt tcggcgtgcc gatgggctac
      661 ggcgggccgc acgccgcctt cttcgcgacg cgggacgagt tcaagcgcac gctgcccggg
      721 cggatcatcg gcgtgagccg cgacgccgcg gggcgccccg cgctgcggat ggcgctgcag
      781 acgcgcgagc agcacatccg ccgagagaag gcgacgagca acgtctgcac cgcgcaggtg
      841 ctgctcgcgg tgatcgccgg catgtacgcc gtgtggcacg ggcccgaggg gctgcgggcc
      901 atcgcccgcc gcatccatcg gcacgcggcg gtgctcgcgg ccggcctcga gcagctgggg
      961 cacacgctgg ccagcggcga ctatttcgac acgctgtgcg tggagctggc ggggggcacg
     1021 gccgacgacg tcgtcgcggc ggcggcggcg cgccagatca acctgcgccg cgccggcgag
     1081 cagcgggtca tcgtcgcgct ggacgagacg gtgaccgagg acgacgtgca ggccctgctc
     1141 accatcttcg ccgccggcca gccggcgccg gagacgggcg ggctcgccgc cgaggtggac
     1201 gaccggttcg acgagcgctt cgcgcggacg agcgccttcc tcacgcaccc ggtgttcaac
     1261 acgcaccact ccgagaccga gatgctgcgc tacatgcgca cgctcgagtc gcgcgacctg
     1321 tcgctgacgc actcgatgat cccgctgggc agctgcacga tgaagctgaa cgccacggcg
     1381 gagatgatcc ccatcacgtg gccggagttc ggcaagctcc atcccttcgc gccggtggac
     1441 caggcgcagg gctaccagga gctgttccgc aacctcgagg gcgcgctggc cgagatcacc
     1501 gggttccacg ccgtgtcgct ccagccgaac gccggctcgc agggcgagta tgccggcctg
     1561 ctgacgatcg ccgcctacca ccgcgcgcgc ggccagggcc accggacggt gtgcctcatt
     1621 ccccagagcg cgcacggcac caatcccgcc agcgcggtga tggcggggat gacggtggtg
     1681 gtcacgaaga ccgacgcccg cggcaacatc gacgtcgcgg acctgcgggc gaaggcggag
     1741 gcgaacgccg acaagctcgc ggcgctgatg gtgacctacc cgagcaccca cggcgtgttc
     1801 gaggagagca tccgcgagat ctgcgcgatc gtccaccagc acggcggaca ggtgtacatg
     1861 gatggcgcga acatgaacgc catggtcggc ctgtgccggc cgggcgacat cggcgccgac
     1921 gtgtgtcacc tcaacctgca caagacgttc tgcatccccc acggcggcgg cgggccgggc
     1981 atggggccga tcggcgtggc gaagcagctg gcgcccttcc tccccggcaa cccggtggtg
     2041 cgcaccggcg gcgaccaggc ggcgggcgcg gtgagcgcgg cgccctgggg cagcgcgagc
     2101 atcctcccga tctccatgat gtacatcgac atgatggggg gcgaggggct cgcctacgcg
     2161 accaaggtcg cgatcctgaa cgccaactac gtcgcggcgc ggctggaccc ccactacccc
     2221 gtgctgtaca agggtgccaa cgggcgcgtg gcgcacgagt gcatcgtcga tccgcgggcg
     2281 ctcaagggga gcgcggggat cgaggtggag gacatcacga agcggctgat ggactacggc
     2341 ttccacgccc ccacggtgag cttcccggtg gcggggacgc tgatgatcga gccgacggag
     2401 agcgagccga aggcggagct cgaccgcttc tgcgatgcgc tgatcgcgat ccgcgaggag
     2461 gtgcgcgcaa tcgagcgcgg caccgccgac cgggaggaca atccgctcaa gcacgcgccc
     2521 cacacgatgc gcgccgtggt gagcgaccgg tgggagcacc gctacggccg cgaggaggcc
     2581 gccttcccgg cgccgtggac gcgcgagcgg aagttctggc ccaccgtggg ccgcatcgag
     2641 agcgcctacg gcgaccggca cctcgtctgc tcgtgcctgc cgacggacgc ctacgcggag
     2701 gacgtggcgg gggaagcgtg accggtgata agtgaccggt gaccggtggt cagtgaatcg
     2761 tgatcggtga tcagtgaacg atgaaggcac accagaccga gtccggtgtg cctttaccgt
     2821 tcaccgttca ccgtcaaccg ttcactgtcc cgtcttggcc ttgtacgccg ccgcgtccag
     2881 cagcccgctc ttctcgctct cgtcggccag cttcatccgg atcatccagc cgtcgccgta
     2941 cgggctgctg ttcaccagtg cgggctcccc gtccaggcgg gagttgatct ccaccacctc
     3001 gccgctcacc ggcgcgtaca gctcg
//
LOCUS       DASSYW010000741         2996 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1394335, whole genome shotgun sequence.
ACCESSION   DASSYW010000741 DASSYW010000000
VERSION     DASSYW010000741.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2996)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2996)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2996
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1394335"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1717)
                     /gene="glgB"
                     /locus_tag="VFN38_11810"
     CDS             complement(<1..1717)
                     /gene="glgB"
                     /locus_tag="VFN38_11810"
                     /EC_number="2.4.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003844 - 1,4-alpha-glucan branching
                     enzyme activity [Evidence IEA];
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_function: GO:0043169 - cation binding [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0005978 - glycogen biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-alpha-glucan branching protein GlgB"
                     /protein_id="HET9012495.1"
                     /translation="MTTPARPARPAVAPPLDDATRTALLRGTHAEPHQVLGPHSATVE
                     GTLGVVIRVLQPEAADCFVVRDGVATAMRAEGDGFFQLFLAGAPLPLRYALRFLAGDG
                     RTWERGDPYRFESTVGEMDLYLFREGTHRRLWTMLGAHPRTVDGDEGTAFALWAPNAT
                     RVSVVGDWCNWDGRQFPMRRLGESGLWELFIPGVAANALYRFELRTTEGHLRVKTDPM
                     ALKMEQAPGTASIVVATGGYGWGDEAWMTARPARHLVSEPVHIYEVHLGSWARVPEQG
                     DRFLSYREIAPRLAEHVTRLGFTHVELLPVMEHPFYGSWGYQVTGYFAPTSRYGSPDD
                     FRYFVDVMHQHGIGVLLDWVPAHFPKDDYALRRFDGTALYEHEDPRLAEHPDWGTLIF
                     NYGRKEVRNFLVANALYWLHEFHVDGLRVDAVASMLYLDYSRNAGEWVPNKYGGRENL
                     EAIDFLREMNAVVCEDAPGCVTIAEDSTAWPGVTRPIRSGGLGFTFKWNMGWMHDTLG
                     YFARDPIHRRHHQDELTFAMVYEHSEHFIMPLSHDEMVHLKGSLYEKMPGDPWQKLAN
                     LRALLA"
     gene            complement(1714..>2996)
                     /locus_tag="VFN38_11815"
     CDS             complement(1714..>2996)
                     /locus_tag="VFN38_11815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012496.1"
                     /translation="LEAANPRFYTDFTGTGNSLNMRHPRTIQLVMDSLRYWVKEMHVD
                     GFRFDLAPVLARELYEVDKLSAFFDIMQQDPTLSRVKLIAEPWDVGPGGYQVGNFPVR
                     WTEWNGKYRDCVRKFWRGEPGQVGEMAARLAGSSDIFKGSDRGVYASINFITAHDGYT
                     LRDLVSYERKHNEANGENNQDGHNDNISRNWGVEGETDDPAVNAMRQRLMRSFLATLA
                     FSQGVPMIAHGDEIARTQGGNNNAYAQDNEITWMDWNLGPPQRELVEFTRRLIAVRQA
                     HPVLRRRHFFKGAAAEGSTQKDVTWIRPDGREMRDEDWRNADARALGMLIDGGATDEV
                     DERGHAVCGDTLLLILNGGEQDVSFSLPELGGEKVWVIMVDTAKDDVSVVRQSSVQVE
                     AHALMLLRFGADRRIVTSEDARREPLSAVERHTP"
BASE COUNT          410 a         1098 c         1013 g          475 t
ORIGIN      
        1 aggcgagcag cgcgcgcagg ttggcgagct tctgccaggg gtcgcccggc atcttctcgt
       61 acagcgatcc cttcaggtgc accatctcgt cgtgcgacag cggcatgatg aagtgctcgc
      121 tgtgctcgta caccatggcg aaggtgagct cgtcctggtg gtggcgccgg tggatcgggt
      181 cgcgcgcgaa gtagccgagc gtgtcgtgca tccaccccat gttccacttg aaggtgaagc
      241 cgagcccccc gctgcggatc gggcgcgtca ccccgggcca cgccgtggaa tcctcggcga
      301 tcgtcacgca gcccggcgcg tcctcgcaca ccaccgcgtt catctcgcgc aggaagtcga
      361 tcgcctcgag gttctcgcgc ccgccgtact tgttgggcac ccactcgccg gcgttgcggc
      421 tgtagtccag gtagagcatc gaggccacgg cgtccacccg caggccgtcc acgtggaact
      481 cgtgcagcca gtacagcgcg ttggccacga ggaagttgcg gacctccttg cggccgtagt
      541 tgaagatcag cgtcccccag tcggggtgct cggccagccg cgggtcctcg tgctcgtaca
      601 gcgccgtccc gtcgaagcgg cgcagcgcgt agtcgtcctt gggaaagtgc gccggcaccc
      661 agtccagcag cacgccgatc ccgtgctggt gcatcacgtc cacgaagtac cggaagtcgt
      721 ccgggctgcc gtagcgcgac gtgggcgcga agtagcccgt cacctggtag ccccacgatc
      781 cgtagaacgg gtgctccatc accgggagca gctccacgtg ggtgaagccc agccgcgtca
      841 cgtgctcggc cagccgcggc gcgatctcgc ggtagctgag gaagcggtcc ccctgctcgg
      901 gaacgcgcgc ccacgagccg aggtgcacct cgtagatgtg caccggctcg ctcacgagat
      961 ggcgcgcggg acgcgccgtc atccacgcct cgtcgcccca cccgtagccc ccggtggcca
     1021 ccacgatgga cgccgtgccc ggcgcctgct ccatcttgag cgccatcggg tcggtcttca
     1081 cgcgcaggtg gccctcggtg gtgcgcagct cgaaccggta cagcgcgttc gccgccacgc
     1141 cggggatgaa cagctcccac agcccgctct cgcccagccg gcgcatcggg aactggcggc
     1201 cgtcccagtt gcaccagtcg cccaccacgc tcacgcgcgt cgcgttcggc gcccacagcg
     1261 cgaacgccgt cccctcgtcg ccgtccaccg tgcgcgggtg cgcccccagc atcgtccaca
     1321 gccggcggtg cgtcccctcg cggaagaggt agaggtccat ctcgccgacg gtcgattcga
     1381 accgatacgg atcgccgcgc tcccaggtgc gtccgtcgcc ggcgaggaag cgcagggcgt
     1441 agcggagcgg caggggcgcg ccggcgagga agagctggaa gaagccgtcg ccctcggccc
     1501 gcatcgccgt ggccaccccg tcgcgcacga cgaagcagtc cgccgcctcg ggctggagga
     1561 cgcggatcac gacgccgagc gtcccctcca cggtggcgga gtgggggccg agcacctggt
     1621 gcggctcggc gtgggtgccg cggagcagcg cggtgcgggt ggcgtcgtcg agggggggcg
     1681 ccacggcggg gcgggcgggg cgcgcggggg tggtcatggc gtgtgccgct ccacggcgct
     1741 cagcggctcg cgccgcgcgt cctcgctcgt cacgatccgg cggtcggcgc cgaagcgcag
     1801 cagcatcagg gcgtgcgcct ccacctgcac cgacgactgg cgcaccaccg acacgtcgtc
     1861 cttcgccgta tccaccatga tcacccagac cttctcgccg cccagctccg gcagcgagaa
     1921 cgagacgtcc tgctccccgc cgttgaggat cagcagcagg gtgtcgccgc acacggcgtg
     1981 tccgcgctcg tccacctcgt cggtggcgcc cccgtcgatg agcatgccga gcgcgcgcgc
     2041 gtccgcgttg cgccagtcct cgtcgcgcat ctcgcggccg tcgggccgga tccaggtgac
     2101 gtccttctgc gtggagccct ccgccgcggc ccccttgaag aagtgccgcc ggcgcagcac
     2161 cggatgcgcc tgtcgcaccg cgatgagccg gcgcgtgaac tccaccagct cccgctgcgg
     2221 cgggccgagg ttccagtcca tccaggtgat ctcgttgtcc tgcgcgtagg cgttgttgtt
     2281 gccgccctgc gtccgcgcga tctcgtcgcc gtgcgcgatc atcggcacgc cctgcgagaa
     2341 ggcgagcgtg gcgaggaagc tccgcatcag ccgctgccgc atcgcgttca ccgcggggtc
     2401 gtcggtctcc ccctccaccc cccagttgcg gctgatgttg tcgttgtggc cgtcctggtt
     2461 gttctcgccg ttggcctcgt tgtgcttccg ctcgtagctc accaggtcgc gcagggtgta
     2521 gccgtcgtgc gccgtgatga agttgatgct ggcgtacacg ccgcggtcgc tgcccttgaa
     2581 gatgtcgctc gagccggcga gccgggcggc catctccccc acctgcccgg gctcgccgcg
     2641 ccagaacttc cgcacgcagt cccggtactt cccgttccac tccgtccagc gcaccgggaa
     2701 gttgcccacc tggtaccctc ccggtcccac gtcccacggc tcggcgatga gcttcacgcg
     2761 cgacagcgtg gggtcctgct gcatgatgtc gaagaacgcc gacagcttgt ccacctcgta
     2821 cagctcgcgc gccagcaccg gcgcgaggtc gaagcggaac ccgtcgacgt gcatctcctt
     2881 cacccagtag cgaagcgagt ccatcacgag ctggatcgtt cgcgggtgcc gcatgttgag
     2941 cgagttgccc gtgccggtga agtccgtgta gaagcgcggg ttcgccgcct cgagcc
//
LOCUS       DASSYW010000742         2255 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1127633, whole genome shotgun sequence.
ACCESSION   DASSYW010000742 DASSYW010000000
VERSION     DASSYW010000742.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2255)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2255)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2255
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1127633"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..435
                     /locus_tag="VFN38_11820"
     CDS             <1..435
                     /locus_tag="VFN38_11820"
                     /inference="COORDINATES: protein motif:HMM:NF012707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HET9012497.1"
                     /translation="LVLDSSPMRSVDDFDRDGVTVAAVRAQTQEIYLSANLKRARVKP
                     IESQPPQAELERMLAAKEVDAIALNTQRAAEAVAAAKTKVRALTGSYVAVEQSFVVKS
                     GDAVNAKLLDAFVDELRASGFIRASLDRAQLGTVGVAPARRK"
     gene            1105..>2255
                     /locus_tag="VFN38_11825"
     CDS             1105..>2255
                     /locus_tag="VFN38_11825"
                     /inference="COORDINATES: protein motif:HMM:NF012935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HET9012498.1"
                     /translation="MATNLPRTDVVIVGLGATGGVAALPLAQAGLDVVGLEAGRWMAT
                     ADHAPDELRNNLRGWPHAVQKANREIPTHRANASAPYSPRAAVHPMMNAVGGTSLHYW
                     AQSWRLNPWDFKVVSETRRRYGASRLPKGTTVEDWPFGLEELEPYYDKVEFEIGVSGQ
                     AGNVKGVIDPRGNKFEGARARPYPMPPLRGTGFTEMMAGSARSLGWHPFPGPAAITSG
                     RYDGRAGCVYHGFCNRGGCHVSSKGSTAVTTIPKAQRTKRLTVVTEAHVTSIDVDAQG
                     RVSGVTYRKGTEEFFQPASVVLLAGYTYENVRLLLLSTSAAFPKGLSNNHGQVGRHYF
                     SHNQIATVNALFPRNLNTWYGLPAQGVAVDDWADDNFDHSGIDFIGGGNL"
BASE COUNT          373 a          787 c          782 g          313 t
ORIGIN      
        1 ctcgtactcg attcgtcgcc gatgcgcagc gtggacgact tcgatcgcga tggtgtgacg
       61 gtggcggcgg tgcgcgcgca aacacaggag atctacctga gcgcgaactt gaagcgcgcg
      121 cgcgtgaagc cgatcgaatc gcagccgccg caggccgagc tcgaacggat gctcgcggcg
      181 aaagaagtcg atgccatcgc cctcaacacg cagcgcgcgg ccgaagccgt ggcggccgcg
      241 aagacgaagg tgcgggcgct gacgggaagc tacgtggccg tggagcagtc gttcgtcgtg
      301 aagagcggcg acgcggtcaa cgcgaaactg ctcgacgcgt tcgtcgacga gctccgggca
      361 tcgggcttca tccgcgcctc gctcgaccgg gcacagctcg gcaccgtggg cgtggcgccc
      421 gcgcgccgca aatgagcgcc gacgatccgc atcgacccga cggcctgtcg cgccgcgcgc
      481 tgctcgggcg tgtaggggcc gccggcgcgt tcgtggcgct gaccgatgtt ctgccgtccg
      541 ccgtgggcga tgccgaggcg caggccggcc gggcggcggc ccgggacccg ctcgagacgc
      601 tgacgcagac cgaagccgat acgctcggcg cgatcaccgc gcgcctcatc cccaccgatg
      661 cgaacgggcc cggcgcggcg gaggctcgcg cggcaagcta catcgatcgc gcgctcggcg
      721 gtgcactcgc cgattttcgc gacgtctacc ggaaagggct cgccagcgtg gacgcctacg
      781 cgcgcgccag caaaggcgcg ccgttcgtgc agctcgccgc cgccgaccag gatgccgtcc
      841 tcggcgatct cgaacgcaac gccgccacgg gcttcgaggg cggctcggcg ccgttcttca
      901 acctggtgct ggcgcacacc gtgcagggta cgttcggcga tcccttctac ggcggcaacc
      961 ggaacttcgc gggctgggat ctgatcggct atcccggcgt gcgcctcgcc gtcaccgcgg
     1021 aacagcagaa cctcgacgcc aaggccgcgc ccacgcacat gtcggcgtac gactacacca
     1081 tgttctcggg caggaaaccg gcacgtggcc acgaacctgc cgcgcaccga cgtggtgatc
     1141 gtcggcctcg gcgccaccgg cggcgtggcg gcgctgccgc tggcacaggc cggtctcgac
     1201 gtggtggggc tcgaagccgg ccggtggatg gccaccgccg accacgcgcc cgacgagctc
     1261 cgcaacaacc tgcgcggctg gccgcacgcg gtgcagaagg ccaatcgcga gattcccacg
     1321 catcgcgcca acgcctcggc gccgtactcg ccgcgggcgg cggtgcaccc gatgatgaac
     1381 gccgtcggag gcacctcgct ccactactgg gcgcagagct ggcggctgaa tccgtgggac
     1441 ttcaaggtgg tcagcgaaac gcgtcgccgg tatggcgcgt cgcggctgcc caagggcacg
     1501 accgtcgagg actggccgtt cggcctcgag gagctggagc cgtactacga caaggtcgaa
     1561 ttcgagatcg gcgtatcggg ccaggccggc aacgtcaaag gcgtcatcga cccccgcggc
     1621 aacaagttcg agggggcgcg ggcgaggccg tacccgatgc cgcccctgcg gggcacgggc
     1681 ttcaccgaaa tgatggcggg ctcggcgcgc tcgcttggtt ggcacccgtt cccgggaccc
     1741 gccgccatca cctccggacg ctacgacgga cgcgcgggct gcgtgtatca cggcttctgc
     1801 aatcgcggcg gctgccacgt gagctcgaag ggctcgacgg ccgtcaccac gatcccaaag
     1861 gcgcagcgaa cgaagcgcct gaccgtcgtc accgaagcgc acgtgacgtc gatcgacgtg
     1921 gacgcgcagg ggcgcgtgag cggcgtcacg tatcgcaaag gcaccgagga gttcttccag
     1981 ccggcttctg tagtgctgct cgccggctac acctacgaga acgtccgcct gctgctgctc
     2041 tcgacgtccg cggcatttcc gaaagggctc tccaacaatc acggccaggt ggggcgccat
     2101 tacttcagcc acaaccagat tgcgacggta aacgcgctct tcccgcgcaa tctcaacacg
     2161 tggtacgggc tgccggcgca gggcgtggcc gtggacgact gggccgacga caacttcgat
     2221 cacagcggaa tcgacttcat cggcggcggc aacct
//
LOCUS       DASSYW010000743         3187 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_500128, whole genome shotgun sequence.
ACCESSION   DASSYW010000743 DASSYW010000000
VERSION     DASSYW010000743.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3187)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3187)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3187
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_500128"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(15..1151)
                     /locus_tag="VFN38_11830"
     CDS             complement(15..1151)
                     /locus_tag="VFN38_11830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HET9012499.1"
                     /translation="MISDPLLQPVGEASSPATTASIDKRASRRVAVEEAVLPPLVALM
                     LAAVVGDLLILSFGESPGAVYKLLLDGTWGNAYGFGQVLYKATTLTFTGLAVGLGLRA
                     GLFNIGAESQLAAGGFVAALAGMLLPPGIPALLCLPLYILAAALGGGVVGAVPGVLKA
                     RFGAHEVITTIMLNFVVLALLNYLVSAKLHVPDTLHTPELHSGALPRLADFLAPFHGS
                     AANATILLAIATAAALGWYLFRTRRGFELRSVGLQPAAAEYAGVNVAGVTWRALAVSG
                     AIAGLGGLNYVLGYKHYYEEGFATGAGFLGIAVALVGRSHPAGIVVAALLFATLSQGG
                     LAVNALVPKQMVDVLQAVVILAVATSVPEVRRLLRGARAAGSAR"
     gene            complement(1148..2698)
                     /locus_tag="VFN38_11835"
     CDS             complement(1148..2698)
                     /locus_tag="VFN38_11835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HET9012500.1"
                     /translation="MVDSARPPALFLRGITKSFGPVVANRGADLEVAAGEIHALVGEN
                     GAGKSTLMRVLSGMYGADAGTMAVNGRDVSGWSTSDAIAAGVGMVHQHFMLVPTLTVA
                     ENVMLGSEITRGAVLDRAAAEQAVRDLSARTGLAVPPQRLVADLSVGEAQRVEILKTL
                     YRGAKILILDEPTAVLSPPEVRELWQVLRALRDAGGTVVLITHKLDEVIDVSDSITVM
                     RQGKTVARMPTRGATPQAIARAMVGRDVALALDAEYAERPAAGGREPGAASVLLEVRD
                     LTVAGARRAAAVDGVSFSIAPGEILGIAGVEGNGQTELVEALAGLRPARGSIVLAGRD
                     LVAASVRQRGDAGLSHIPEDRHERGLILDYSVAENLILGQQHRFTRGLTLDKRRVAEH
                     ARSLIGAYDIRPADPELPARALSGGNQQKIVVAREMSRDFKVLLAAQPTRGVDVGAIE
                     FIHARLRGARDQGKAVLLVSADLAEVLALADRVAVMYGGRIVAVLPRSEATPDAIGPL
                     MTGAERAA"
     gene            complement(2717..>3187)
                     /locus_tag="VFN38_11840"
     CDS             complement(2717..>3187)
                     /locus_tag="VFN38_11840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BMP family ABC transporter substrate-binding
                     protein"
                     /protein_id="HET9012501.1"
                     /translation="VKRVCPDCQVISQYAGVTPEAFRNPGKGKELALSQYQQGVNVIF
                     HASGSTGLGVFEAARQTGKLAIGVDADQFNEAPGFVLTSMVKGVDNAVFDAIRRVKEG
                     RFKGGIYQYGLAENGVGYVYDANNEKLIPAEVRTRLEALKQDIIAGKITVPSTR"
BASE COUNT          449 a         1171 c         1142 g          425 t
ORIGIN      
        1 gaaggcgagg aggatcatcg ggcgctcccg gccgcgcgcg cgccgcggag cagccgccgc
       61 acctcgggca ccgaggtcgc cacggcgagg atgaccaccg cctggagcac gtccaccatc
      121 tgcttgggca cgagcgcgtt caccgcgagc cccccctgcg acagggtggc gaacagcagc
      181 gccgccacga cgatccccgc cgggtgactg cgtcccacca gcgcgacggc gatgccgagg
      241 aagccggcgc ccgtcgcgaa cccttcctcg tagtaatgct tgtagccgag cacgtagttg
      301 agccctccga gtccggcgat cgcccccgac acggcgagcg cgcgccaggt gacgccggcg
      361 acgttcaccc cggcgtactc cgcggccgcg ggctgcagcc ccaccgagcg cagctcgaag
      421 ccgcggcgcg tgcggaacag gtaccacccg agcgcggcgg cggtggcgat ggcgagcagg
      481 atcgtcgcgt tcgccgccga gccgtggaag ggagccagga agtcggcgag ccgcggcagc
      541 gcgccgctgt gcagctccgg cgtgtgcagg gtgtcgggga cgtgcagctt cgcgctcacc
      601 aggtagttca gcagcgcgag cacgacgaag ttgagcatga tcgtcgtgat cacctcgtgc
      661 gcgccgaagc gcgccttgag cacaccgggc accgccccca ccacgccgcc gcccagcgcc
      721 gcggccagga tgtacagcgg caggcagagc agagcgggaa tgccgggggg aaggagcatc
      781 ccggcgagcg ccgccacgaa ccctcccgcc gcgagctggc tctcggcgcc gatgttgaac
      841 aggccggccc gcagtccgag gccgacggcc agcccggtga aggtcagggt cgtcgccttg
      901 tacagcacct gcccgaagcc gtacgcgttc ccccaggtgc cgtcgagcag gagcttgtac
      961 acggccccgg gcgactcgcc gaacgagagg atcagcaggt cgccgacgac ggcggcgagc
     1021 atcagggcga cgagcggcgg caggaccgct tcctcgaccg ccacccggcg cgacgcgcgc
     1081 ttgtcgatcg acgcggtggt ggccggggag gacgcctcgc cgacgggctg cagcagcggg
     1141 tcgctgatca tgcggcgcgc tccgcgccgg tcatcagcgg gccgatggcg tccggggtcg
     1201 cctcggagcg cgggagcacg gcgacgatgc ggccgccgta catcacggcc acccggtcgg
     1261 cgagcgcgag cacctccgcc aggtccgccg acacgagcag cacggccttg ccctggtcgc
     1321 gcgccccgcg caggcgcgcg tggatgaact cgatggcgcc gacgtccact ccgcgcgtcg
     1381 gctgcgcggc gaggaggacc ttgaagtcgc gcgacatctc gcgcgccacg acgatcttct
     1441 gctggttgcc gccggagagg gcgcgggccg ggagctcggg gtcggccggc cggatgtcgt
     1501 acgccccgat gagcgaccgc gcgtgctcgg ccactcgccg cttgtcgagc gtgaggccgc
     1561 gcgtgaagcg atgctgctgg ccgaggatga ggttctccgc cacgctgtag tccaggatga
     1621 ggccacgctc gtggcggtct tcggggatgt gcgagagacc ggcgtcgccg cgctggcgga
     1681 ccgacgcggc cacgaggtcg cgccccgcga ggacgatgga gccccgcgcc ggccgcaggc
     1741 cggccagcgc ttccaccagc tcggtctgcc cgttgccctc gaccccggcg atgccgagga
     1801 tctcgcccgg ggcgatgctg aagctcacgc cgtccacggc ggcggcgcgg cgcgctcccg
     1861 ccacggtgag gtcgcgcacc tcgagcagca cgctcgcggc gccgggctcg cggcccccgg
     1921 ccgccggccg ctcggcgtac tccgcgtcga gcgcgagcgc gacgtcgcgg cccaccatcg
     1981 cccgcgcgat cgcctgcggc gtcgcgccgc gcgtcggcat gcgcgccacc gtcttcccct
     2041 gccgcatcac ggtgatggag tcgctgacgt cgatcacctc gtccagcttg tgcgtgatga
     2101 gcacgacggt gccccccgcg tcgcgcagcg cccgcagcac ctgccacagc tcgcgcacct
     2161 ccggcggcga cagcacggcg gtgggctcgt cgaggatgag gatcttcgcg ccgcgataga
     2221 gcgtcttgag gatctccacc cgctgcgcct cgcccaccga caggtcggcg acgagccgct
     2281 ggggggggac ggcgagcccg gtacgcgcgc tcaggtcgcg tactgcctgc tcggccgcgg
     2341 cgcggtcgag caccgccccg cgggtgatct ccgagccgag catgacgttc tcggccacgg
     2401 tgagggtggg cacgagcatg aagtgctggt gcaccatccc taccccggcg gcgatggcgt
     2461 cggaagtgct ccacccgctg acgtcgcgcc cgttcaccgc catggtgccc gcgtcggcgc
     2521 cgtacatccc gctgaggacg cgcatgaggg tggacttgcc ggcgccgttc tcgccgacga
     2581 gcgcgtggat ctcgccggcg gccacctcca ggtcggcgcc gcgattggcg acgacggggc
     2641 cgaaggactt cgtgatgccg cggaggaaga gggccggcgg acgggcgctg tcaaccattc
     2701 gtggggtcgg ggacatctag cgcgtgctcg ggacggtgat cttcccggcg atgatgtcct
     2761 gcttcagcgc ctcgagccgt gtccgcactt cggcggggat gagcttctcg ttgttcgcgt
     2821 cgtacacgta tcccacgccg ttctcggcga gcccgtactg gtagatgcca cccttgaagc
     2881 ggccctcctt cacgcgccgg atcgcgtcga acaccgcgtt gtccacgccc ttcaccatgg
     2941 acgtgagcac gaagccgggc gcctcgttga actgatccgc gtccacgccg atcgccagct
     3001 tccccgtctg ccgcgccgcc tcgaacacgc cgaggccggt ggaccccgat gcatggaaga
     3061 tcacgttcac gccctgctga tactggctga gcgccagctc cttgcccttg cccggattgc
     3121 ggaacgcctc cggcgtgacg cccgcgtatt gcgagatgac ctggcagtcc gggcacaccc
     3181 tcttcac
//
LOCUS       DASSYW010000744         2646 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1335242, whole genome shotgun sequence.
ACCESSION   DASSYW010000744 DASSYW010000000
VERSION     DASSYW010000744.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2646)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2646)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2646
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1335242"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1056
                     /gene="gpmI"
                     /locus_tag="VFN38_11845"
     CDS             <1..1056
                     /gene="gpmI"
                     /locus_tag="VFN38_11845"
                     /EC_number="5.4.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046537 -
                     2,3-bisphosphoglycerate-independent phosphoglycerate
                     mutase activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /protein_id="HET9012502.1"
                     /translation="YLQQLLDAANGRAVIGSVGGRYYGMDRDHRWERTAQWHRAAVLG
                     APPAATDPLAVVRSAYDRGETDEFVVPTSIVDAAGAPLAPMRDGDAVICFNYRSDRMR
                     QIVRALAQPDFSGFAAERRPKVSVATMTLYDQAFAEWGVKVAFAPQSMARIVGEVVSS
                     AGLTNLRTAETEKYAHVTYFFNGGIETPFPGEERRLVPSQKVATYDLAPEMSAPGITD
                     VLCTAIAARQHDFVLCNYANADMVGHTGSIPATLKAVETVDACLARVLDAADKAGARL
                     LVTADHGNCEMMIDPQTGGPHTAHTTNPVPFLLVDESGAHQLRSGGALCDVGPTILGL
                     LGLEQPREMTGRDLRLA"
     gene            1100..1786
                     /locus_tag="VFN38_11850"
     CDS             1100..1786
                     /locus_tag="VFN38_11850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012503.1"
                     /translation="MKALLFGVVALLAAVPAAAQVGHDPASSPYTDLEHKQEITWLVG
                     YMRARHDPAGVAPRSAFLTGVRYEINIVGPLALSADLTRSASERTVLDPAKPLATRTV
                     GTQSTPVYSADLGLGLDLTGRKSWHHLVPQLRAGLGVVSSSAKDDSSTFAFGTPFAFT
                     FGGGLKFVPGGRLQLRMDVTDRVFKLSYPDSYYRKASDNTSVLEDPTPRSFYTHHTAL
                     TVGVSYLFGR"
     gene            1828..2349
                     /locus_tag="VFN38_11855"
     CDS             1828..2349
                     /locus_tag="VFN38_11855"
                     /inference="COORDINATES: protein motif:HMM:NF016836.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BON domain-containing protein"
                     /protein_id="HET9012504.1"
                     /translation="MAHERDYENIHDIDQLDDRELRDLVREQLAAHTALDIDDITVIA
                     AQGNVTLSGRVGTEGEKRVAEHVLNDVLGIMEFTNDLVIDTLRRGESPVDIHDHLADE
                     DARAGTLLGDAPVPLSDEANHLADRVHEDLDGTADYQQVMEDGRTWNPPDSPTPEGIS
                     GSDARPEDMGGQH"
BASE COUNT          420 a          963 c          893 g          370 t
ORIGIN      
        1 tatctccagc agctgctcga cgcggccaac gggcgcgccg tgatcggcag cgtcggcggc
       61 cgctattacg gcatggaccg cgaccaccgc tgggagcgta ccgcccagtg gcaccgcgcc
      121 gccgtcctgg gcgcgccgcc ggccgccacc gatccgcttg ccgtcgtgcg ctcggcgtac
      181 gaccgcggcg agaccgacga attcgtcgtg ccgacgtcga tcgtcgatgc cgccggcgcg
      241 ccgctggcgc cgatgcgcga cggcgacgcg gtgatctgct tcaactaccg ctccgatcgc
      301 atgcggcaga tcgtgcgcgc cctggcccag ccggattttt cgggcttcgc cgccgagcgc
      361 cggccgaagg tgagcgtggc cacgatgacg ctctacgacc aggccttcgc cgagtggggg
      421 gtcaaggtgg cgttcgcgcc gcagtcgatg gcccgcatcg tcggcgaggt ggtgtcgtcc
      481 gccggcctga cgaatctgcg cacggcggaa accgagaagt acgcccatgt gacatacttc
      541 ttcaacggcg ggatcgagac gccctttccg ggagaggaac ggcggctcgt gccgagccag
      601 aaggtggcga cgtacgatct ggcgccggag atgagcgcgc ccggcatcac cgacgtgctg
      661 tgcaccgcga tcgcggcgcg ccagcacgac ttcgtgctct gcaactacgc caacgccgac
      721 atggtggggc acaccggctc catcccggcg acgctgaagg cggtggagac ggtggacgcc
      781 tgcctcgcgc gcgtgctcga cgcggcggac aaggcgggcg cgcggctcct cgtcacggcg
      841 gaccacggca actgcgagat gatgatcgat ccccagacgg gcgggccgca caccgcgcac
      901 accaccaacc ccgtcccctt tctcctcgtc gacgagagcg gggcgcacca gctgcgctcc
      961 ggcggcgccc tgtgcgacgt cggaccgacc atcctcgggc tgctcgggct cgagcagccc
     1021 cgcgagatga cgggacgcga cctgcgtctc gcctgacgag cttcctgttt ccccatcccg
     1081 cacattccgg agtgaacgcg tgaaggcact actgttcggc gtcgtggcgt tgctcgccgc
     1141 ggttcccgcg gcggcccagg tcgggcacga tcccgccagc agcccgtaca cggatctcga
     1201 gcacaagcag gagatcacct ggctcgtggg ctacatgcgc gcccgccacg atccggcggg
     1261 ggtggcgccc cgcagcgcgt tcctcaccgg cgtgcgctac gagatcaaca tcgtcggccc
     1321 gctcgccctc agcgccgacc tcacccgcag cgcctccgag cgcaccgtgc tcgacccggc
     1381 gaagccgctg gccacgcgca cggtgggcac ccagtccacg ccggtctact cggccgacct
     1441 ggggctcggg ctcgatctca cggggcgcaa gagctggcac cacctggtgc cgcagctgcg
     1501 cgcggggctg ggggtcgtct ccagcagcgc gaaggacgat tcgtcgacct tcgcgttcgg
     1561 cacccccttt gcattcacct tcggcggcgg actgaagttc gtgccgggtg gaaggctgca
     1621 gctgcggatg gacgtcaccg accgcgtgtt caagctctcg tatcccgact cgtactatcg
     1681 gaaggcctcc gacaacacgt cggtgctcga ggatccgacg ccgaggagct tctacacgca
     1741 tcacaccgcg ctgacggtgg gcgtgtcgta cctcttcggg cgctgacccg gacgagccga
     1801 cgatcacctt cgacggcggc ggcgaccatg gcgcacgagc gcgactacga gaacatccac
     1861 gacatcgacc agctcgacga ccgtgagctg cgcgacctgg tgcgcgagca gctcgcggcg
     1921 cacacggcgc tcgacatcga cgacatcacg gtcatcgcgg cccaggggaa cgtcaccctg
     1981 tccgggcgcg tcggcaccga aggcgagaag cgcgtcgccg agcacgtgct caacgacgtc
     2041 ctcggcatca tggagttcac caacgacctc gtgatcgaca cgctccggcg gggcgagagc
     2101 ccggtggaca tccacgatca tctggccgac gaggacgccc gcgccggcac cctgctgggc
     2161 gacgcgccgg tgccgctgag cgacgaggcg aaccacctgg ccgatcgcgt gcacgaagac
     2221 ctggacggca ccgcggacta ccagcaggtg atggaggacg ggcgcacctg gaacccgccc
     2281 gactcgccga cccccgaagg gattagcggc agcgacgcgc gtccggagga catgggggga
     2341 cagcactgaa cgaccgtgca cggtgagcgg tgaacggtga atcacgaagg gcaccccgga
     2401 cgcggtccgg ggtgcccttc gtcgctcccg gcacgcgccc acgtactgtc ccgccgtggg
     2461 accgcctatc ttctccccca tgcctatcta tctcacccgc cgcgtcacct tcgcggcggc
     2521 gcatcgctac cgggtcgcgg agtggagcga cgagcggaac gccgccacgt tcgggctgtg
     2581 cgcgcggcca agcttccacg gccacagcta cgtctgcgac gtcaccgtca ccggggagct
     2641 cgaccc
//
LOCUS       DASSYW010000745         2447 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_708379, whole genome shotgun sequence.
ACCESSION   DASSYW010000745 DASSYW010000000
VERSION     DASSYW010000745.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2447)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2447)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2447
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_708379"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..509)
                     /locus_tag="VFN38_11860"
     CDS             complement(<1..509)
                     /locus_tag="VFN38_11860"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HET9012505.1"
                     /translation="MSGFDLSGKVAVVTGASRGLGQTFARALARAGADLVITSRKLDS
                     LVPFQAEIESLGRRAVALELDVRSEDSIRAMAAGAAAAYPRLDILVNNAGCNVRKRAL
                     DVTWDDWNLILDTNLRGAFFVAQAIAALMMPHGRGRIINIGSLTSVMGSAGLGPYGAS
                     RGGIRQLTM"
     gene            complement(506..1537)
                     /locus_tag="VFN38_11865"
     CDS             complement(506..1537)
                     /locus_tag="VFN38_11865"
                     /inference="COORDINATES: protein motif:HMM:NF012335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactitol-1-phosphate 5-dehydrogenase"
                     /protein_id="HET9012506.1"
                     /translation="MKALLLSEYRKLSVVDMPVPDVGAGEALVRVRACGICGSDIHGY
                     DGSTGRRIPPLVMGHEAAGVIERVGAGVRGFVAGDRVSFDSTVSCGACDFCRRGRINL
                     CDNRTVLGVSCGDYRRHGAFAEYVAVPARILYKLPDGLPFERAALLEAVSVAVHGVNR
                     RVPAPEETAVVVGSGMIGVLIVQVLRAKGVTNVVAVDVDPRKLALARRMGATHTIDAA
                     QCDVPAAVRELTGGRGADVSFEVVGNSQALLSAIRSLRKGGATVLVGNLSPRVEMPLQ
                     EVVSRELDVLGSCASSGEIPESIDLLARGAVDVEPIISLKAPLDAGPALFERLYRGDA
                     TLMKVILQP"
     gene            complement(1550..>2447)
                     /locus_tag="VFN38_11870"
     CDS             complement(1550..>2447)
                     /locus_tag="VFN38_11870"
                     /inference="COORDINATES: protein motif:HMM:NF037982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="Nramp family divalent metal transporter"
                     /protein_id="HET9012507.1"
                     /translation="VGLGVIFAISPESWRALPAGFTHAGVLPDGLSVALIFGAIAFAG
                     SGGAQNLIQSNWIRDKGFGMGQYVPRLVSPITGTPEAEHVTAVSYAFEITPTNMARWR
                     QWWRFANVEQLCSFVFVTVITIGLTSLLAHSTLFGQPDLPNNVSFLRIEAQRLDQSVG
                     PWFGVLFLAVGAFSLFGSAMGIIDYTSRLAADVLKTTYVPDRSEHRMYFWLVWGMVGL
                     GCVILLAGVSQPLTLLVISASTGGTIMFLYSFMLIVLNRRLLPPALRIGPFRTAALVW
                     STVLFGSLAALTIYTQAQALLR"
BASE COUNT          428 a          876 c          805 g          338 t
ORIGIN      
        1 ctcatggtca gctgacggat gccgccgcgg ctcgcgccgt acggtcccag gccggccgat
       61 cccatcacgg acgtgagcga cccgatgttg atgatgcggc cgcggccgtg cggcatcatc
      121 agcgcggcga tcgcctgcgc cacgaagaac gcgccgcgga gattcgtgtc gaggatcagg
      181 ttccagtcgt cccacgtgac gtccagcgcc cgcttgcgca cgttgcagcc ggcgttgttc
      241 accaggatgt cgagacgcgg ataggcggcg gccgcgccgg ccgccatcgc gcggatgctg
      301 tcctcgctgc ggacgtccag ctcgagcgcc accgcccggc ggcccagcga ctcgatctcc
      361 gcctggaatg gcaccagcga gtcgagcttc cggctggtga tcacgagatc ggcaccggcg
      421 cgcgccagcg cccgcgcgaa cgtctgcccg agcccccggc tcgcgcccgt cacgacggcg
      481 accttgccac tgagatcgaa tccgctcacg gttgaaggat cactttcatc agggtcgcgt
      541 cgccacgata cagccgttcg aagagcgccg gccccgcgtc gagcggcgcc ttcaggctga
      601 tgatcggctc gacgtccacc gcgccgcgcg cgagcaggtc gatgctctcg ggaatctccc
      661 cgctcgacgc gcacgaaccg agcacgtcga gttcacggct gacgacctcc tgcagcggca
      721 tctcgacgcg cggtgagaga ttgccgacga gcaccgtcgc gccgcccttc cgcagggatc
      781 ggatggcgct caggagggcc tgactgttac ccaccacctc gaacgacacg tcggcgccac
      841 gtccgccggt gagctcacga acggcggctg gaacgtcgca ctgcgccgcg tcgatcgtgt
      901 gcgtggcgcc catccgccgt gcaagcgcga gctttcgcgg gtcgacgtcc acggcaacga
      961 cgttcgtgac gcctttcgcg cgcagcacct gcacgatcag cacgccgatc atgcccgaac
     1021 cgaccacgac ggcagtctcc tccggcgccg gcacgcggcg gttcaccccg tgcaccgcca
     1081 cggagaccgc ctcgaggagc gccgcgcgct cgaacggcag gccgtcgggc agcttgtaga
     1141 gaatccgggc cggtaccgcg acgtattccg caaaggcacc gtgccgccgg tagtcgccgc
     1201 acgagacgcc gagcaccgtg cggttgtcgc acaggttgat ccgcccgcgc cggcagaagt
     1261 cgcaggcgcc gcacgacacc gtcgagtcga acgacacccg gtcgccggcc acgaagcctc
     1321 gcacgccggc gccgacccgt tcgatcacgc cggcggcctc gtgccccatc accagcggtg
     1381 ggatgcgccg tccggtcgag ccgtcgtacc catggatgtc gctgccgcag atgccgcacg
     1441 cccgcacccg caccagcgcc tcgccggcgc ccacgtccgg cactggcatg tcgacgaccg
     1501 acagcttcct gtactcggag aggagcagcg ccttcatcgt ttcacgccgt cagcgaagca
     1561 gggcctgtgc ctgggtgtag atggtgagcg cggcgagcga tccgaagagc accgtggacc
     1621 acacgagcgc ggcggtccgg aacgggccga tgcggagcgc cggcggcagc agccgccgat
     1681 tgagcacgat gagcatgaac gaatagagaa acatgatcgt gccgccggtc gatgcggaaa
     1741 tcaccagcag tgtgagcggc tgcgacactc ccgccagaag aatcacgcac cccagcccca
     1801 ccatgcccca gaccagccag aaatacatcc ggtgctcgga gcggtccggg acgtaggtgg
     1861 ttttcaggac gtccgccgcg aggcggctcg tgtagtcgat gatgcccatt gccgatccga
     1921 aaagcgagaa cgcgccgacg gccaggaaca gcacgccgaa ccaggggccg actgattggt
     1981 cgagccgctg cgcttcgatc cggagaaacg agacgttgtt gggcaggtcc ggctggccaa
     2041 agagcgtcga gtgcgcgagc agcgacgtca acccgatcgt gatcacggtg acgaacacga
     2101 agctgcacag ctgctccacg ttggcaaacc gccaccactg ccgccagcgc gccatgttcg
     2161 tgggagtgat ctcgaacgcg tagctcaccg ccgtcacgtg ctccgcctcg ggtgtcccgg
     2221 tgatcgggct cacgagccgg ggcacgtatt gccccatgcc gaaccctttg tcgcggatcc
     2281 agttgctttg aatgagattc tgcgcgccgc ccgagccggc aaacgcgatg gcgccgaaga
     2341 tcagcgccac gctcaagccg tcgggcagca cgccggcgtg ggtgaagccg gccggcagcg
     2401 cccgccacga ctcgggcgag atggcaaaga tcacgccgag ccccacg
//
LOCUS       DASSYW010000746         2521 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_316011, whole genome shotgun sequence.
ACCESSION   DASSYW010000746 DASSYW010000000
VERSION     DASSYW010000746.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2521)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2521)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2521
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_316011"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..233)
                     /locus_tag="VFN38_11875"
     CDS             complement(<1..233)
                     /locus_tag="VFN38_11875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012508.1"
                     /translation="MPAVTFADVRKIALTLDGVSDSTAYGAPCFKLNGRIFACVAVNK
                     QAEPNSLMVRLPIDQRDVMVEEEPDVYYLKPHY"
     gene            complement(244..888)
                     /locus_tag="VFN38_11880"
     CDS             complement(244..888)
                     /locus_tag="VFN38_11880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012509.1"
                     /translation="MSFAQQPAAPAAGARAGGPGRGRPPLFFKEEWKQTPQGGEHPVD
                     PAIALSNPSLELKLYGPAAKEFLMTGSAGDENNPTHLWTGMCTSPCAATLRHKTSMVD
                     LTGLARIKWNTKMSGFHQVRPLIKLADGTFLVGDRADGTVADWLWSEISFADVKWLRV
                     DIANGVTKGTIVANPDLSKVDEVGYIDLMPGSGHGQGGWSDVAQIEVYGRPVAR"
     gene            complement(1010..>2521)
                     /locus_tag="VFN38_11885"
     CDS             complement(1010..>2521)
                     /locus_tag="VFN38_11885"
                     /EC_number="1.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent dehydrogenase, methanol/ethanol
                     family"
                     /protein_id="HET9012510.1"
                     /translation="FQYDPNESWDWDEVSPPIVNGGVMFISTPANQVLALDAATGKVL
                     WRYTRPRPKDVFVLHDTNRGVALLDDKVYYAAAEAVLVALDAKTGKEVWTTTVADNQS
                     AYYITLAPLVAQGKVLVGASGGEFGVRGFVAAYDAKTGKEQWRTYTVPAPGEPGSETW
                     PKGEQWRTGGAPVWVTGNYDPETNLAFFGTGNGGPWMGDQRPGDNLYVASTVAFDVAT
                     GRIKGHFQYDPNESWDWDEVSPPIVVDYQRGGRTVKGLINVARDGYVWFLERTSGPIN
                     FVEGTPFVTNNVYLRLDPKTGRPEVDPARKPGTGKTAEFCPSPHGGKNWPPIAFSPKT
                     RLIYIPANNNICGTLTGVPVRYEKKRSFSGSMSGQPFAAPGGGHVGGEVQAWHVDTGK
                     KVWTHEYAKSPNWGSMLATGGGLVFSGGTNDRKIHAFDAATGKLLWEAVVSSGIVAPP
                     TTFTVNGRQYLAVHAGWGGDPRGMQNTLNRIFPGEYPPVPEGGSITVYALDRP"
BASE COUNT          370 a          882 c          830 g          439 t
ORIGIN      
        1 tcgtagtgcg gcttcaggta gtagacgtcc ggctcttcct cgaccatcac gtcgcgctga
       61 tcgatcggca gccggaccat gagcgaattc ggctcggcct gcttgttgac cgccacgcac
      121 gcgaagatgc gcccgttcaa cttgaagcac ggcgcgccgt aggcggtgct gtcagagacg
      181 ccatcgagcg tcagcgcgat cttccgtacg tcggcaaacg tgaccgccgg cacgggagcg
      241 tcctcagcgc gcgaccgggc gcccgtagac ctcgatctgc gccacgtccg accagccacc
      301 ctggccgtgg ccgctgcctg gcatcagatc gatgtagccg acctcgtcca ccttcgagag
      361 atccgggttc gcgacgatcg tgcccttggt gacaccgttc gcgatgtcta cgcgcagcca
      421 tttcacgtcc gcgaacgaga tctcgctcca cagccagtcc gccaccgtgc cgtcggcgcg
      481 gtcgcccacc agaaaggtgc cgtcggccag cttgatgagc ggccgcacct ggtggaagcc
      541 ggacatcttg gtgttccact tgatgcgcgc gagcccggtc agatccacca tgctcgtctt
      601 gtgccgcagc gtcgccgcgc agggcgacgt gcacatgccc gtccacaggt gcgtcgggtt
      661 gttctcgtcg ccggcgctgc cggtcatgag gaattccttc gccgccggcc cgtacagctt
      721 cagttcgagg ctcgggttgc tgagcgcaat cgctggatcg acgggatgct cgccgccctg
      781 cggcgtctgc ttccactcct ccttgaagaa gagcggcggc cgcccgcggc cagggccgcc
      841 ggcgcgcgct cccgcggccg gtgcggccgg ctgctgcgcg aacgacatga ccgtcgaaag
      901 aatgccaagc gctgcgatca gcgatgtgaa aagagtgcgt cgcatgagta ctccagttgt
      961 atccgggcct gaagccggga gccggaagcc gggatcctag tgaggcgagt tacggccggt
     1021 ccagcgcgta gacagttatt gaaccacctt ctgggaccgg cgggtactcg ccgggaaata
     1081 tccggttcag cgtgttctgc atgccgcgcg ggtcgccgcc ccagccggcg tgcacggcca
     1141 gatactgccg gccgttcacg gtgaacgtcg tcggcggcgc cacgatgccc gagctcacca
     1201 ccgcttccca caggagcttg cctgtggcgg cgtcgaacgc gtgaatcttc cggtcgttgg
     1261 tgccgccgct gaagacgagc ccgccgccgg tggccagcat cgagccccag ttcggcgact
     1321 tggcgtactc gtgcgtccac accttcttgc cggtgtccac gtgccacgcc tgcacttcgc
     1381 cgcccacgtg gccgccgccg ggcgccgcga acggctgtcc cgacatcgag cccgagaacg
     1441 agcgcttctt ctcgtagcgc accggcacgc cggtgagcgt gccgcagatg ttgttgttgg
     1501 cggggatgta gatcagccgc gtcttcgggc tgaacgcgat cggcggccag ttcttgccgc
     1561 cgtgcggcga cggacagaac tccgccgtct tgccggtacc tggcttgcgc gcgggatcga
     1621 cctcgggccg tcccgtcttc ggatcgagcc gcaggtagac gttgttcgtg acgaacggcg
     1681 tgccttcgac gaagttgatc ggcccggagg tgcgctcgag gaaccacacg tagccgtcgc
     1741 gcgcgacgtt gatcagcccc ttcacggtgc ggccgccgcg ctgatagtcc acgacgatcg
     1801 gcggcgacac ctcgtcccag tcccacgact cgttcgggtc gtactgaaag tgccctttga
     1861 tccgcccggt ggcgacgtcg aacgccaccg tggacgccac gtagaggttg tcgcccggcc
     1921 gctggtcgcc catccacggg ccgccgttgc cggtgccgaa gaacgcgagg ttcgtttcgg
     1981 ggtcgtagtt gcccgtcacc cacaccggcg cgccgccggt gcgccactgt tcacccttcg
     2041 gccacgtctc gctgcccggc tcgcccggcg ccggcaccgt gtaggtgcgc cactgctcct
     2101 tgccggtctt ggcgtcgtac gccgcgacga agccgcgcac gccgaactcg ccgccggacg
     2161 cgcccaccag caccttgccc tgcgccacga gcggcgccag cgtgatgtag tacgccgact
     2221 ggttgtcggc gacggtggtg gtccacactt ccttgccggt cttggcgtcg agcgccacca
     2281 gcacggcctc ggcggcggcg taatagacct tgtcgtcgag cagcgccacg ccgcggttgg
     2341 tgtcgtgcag gacgaagacg tccttcggac gcggacgcgt gtagcgccac agcaccttgc
     2401 cggtggcggc gtcgagcgcc agcacctggt tggcgggcgt ggagatgaac atcacgccgc
     2461 cgttgacgat cggcggcgac acctcgtccc agtcccacga ctcgttcggg tcgtactgaa
     2521 a
//
LOCUS       DASSYW010000747         3506 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_369237, whole genome shotgun sequence.
ACCESSION   DASSYW010000747 DASSYW010000000
VERSION     DASSYW010000747.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3506)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3506)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3506
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_369237"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..592
                     /gene="era"
                     /locus_tag="VFN38_11890"
     CDS             <1..592
                     /gene="era"
                     /locus_tag="VFN38_11890"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HET9012511.1"
                     /translation="MLDVLKELKTPVILALNKVDLIKKTRLLPLLESYRQAHPFVEFV
                     PLSAVDGTNVDVLERLFLTYLPEGEPLYPPEYLTDQTERFFAAEIVREQVLNLTHDEL
                     PFSTTVVVDQFDETGDDGITKIYCTILVDRESQKPIVVGRGGAMIKAIGTAARAEMER
                     EMERRIYLDLHVKVKAEWRDNERLLDDIDKQNRVTE"
     gene            635..1051
                     /locus_tag="VFN38_11895"
     CDS             635..1051
                     /locus_tag="VFN38_11895"
                     /inference="COORDINATES: protein motif:HMM:NF019013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0030638 - polyketide metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ester cyclase"
                     /protein_id="HET9012512.1"
                     /translation="MGENEALVRRWFRDVWKAGGETTVDELLAPNIEGFLEGRNIHTS
                     AEFQESRRQLLDAFPDLAVEVEDVVEQGDRAVIRWRCRATHKGGGLGIPATFKQVAFR
                     GMTWVEIQNGQIVRGWDSWNQGALVQSLMGPAARVG"
     gene            1060..1503
                     /locus_tag="VFN38_11900"
     CDS             1060..1503
                     /locus_tag="VFN38_11900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012513.1"
                     /translation="MAVLLALALPAVAGAQGLSADARAKAEQIWNRYVALEAAFDPAV
                     ADLYADDAVIRNRRTYPTGEVREATVPAAQYKVLVRTAIPIARARNDISRYSGCTYAA
                     EGARVRVACARFSTLKNYTSPISVLVGPGPAGAWLIFEEISESRP"
     gene            1500..1952
                     /locus_tag="VFN38_11905"
     CDS             1500..1952
                     /locus_tag="VFN38_11905"
                     /EC_number="3.5.4.33"
                     /inference="COORDINATES: protein motif:HMM:NF012601.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0052717 - tRNA-specific adenosine-34
                     deaminase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside deaminase"
                     /protein_id="HET9012514.1"
                     /translation="MTGADEALVRQVMALAREAREAGNHPFGSLLSLDGVVVLTARNT
                     VHTDRDPTAHAETNLLAEAIRRLTPDQIARSVLYTSCEPCAMCVGKMYWAGIRTIVYA
                     LPATELARLAGGSFLVPCRDLLARAKDRVAVIGPLLVDEARVVHEGFW"
     gene            1969..2385
                     /locus_tag="VFN38_11910"
     CDS             1969..2385
                     /locus_tag="VFN38_11910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012515.1"
                     /translation="MTLALAGVVARAQVPPAAQQVATAAGITAPVIAACQGQFRPGQR
                     GWAVAANGRYIVIDGLGAAVELAAFTGKPDLSCYSRAEALELDRSIQRSDTLSGRIAP
                     RVDTAVICAFVEATAARCWQYSPAERVFVDVGGWTT"
     gene            2402..3352
                     /locus_tag="VFN38_11915"
     CDS             2402..3352
                     /locus_tag="VFN38_11915"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF016115.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HET9012516.1"
                     /translation="MRVRVASLTVLCLTVATMASAQRWQPPADTERCPSKWGPQDQRG
                     AGNHMKPETVLKAARLIKTGEVFELGRVLSDTMPLPAGRRFEVFTKRTRNDPGRNRRG
                     SNEELVVSEIGQVGTQFDTFSHQMIGSSMYNCVTLDAAASRTGFNRLSVDQVGTLFTR
                     GVLLDIAALKGVAALADTYEITPKDLQDALAAQKLTLQPGDAVLIHTGWGTLWGKDNA
                     RYQRVSPGIGTAAAEWLAKQDPMLVGADNTAVEISPNPDPDLAGPVHQIMLVVNGIHL
                     LENLRLDELAARRAYEFALIVEPLKIQGGTGSTVAPVAVR"
BASE COUNT          588 a         1125 c         1236 g          557 t
ORIGIN      
        1 catgctcgac gtgctcaagg agctgaagac gccggtgatc ctggcgctca acaaggtcga
       61 tctgatcaag aagacgcggc tgctcccgct cctcgagtcg taccggcagg cgcacccgtt
      121 cgtggagttc gtgccgctgt cggcggtgga cggcaccaac gtggacgtac tcgaacggct
      181 gttcctcacc tacctgccgg aaggggagcc gttgtacccg ccggagtatc tgaccgacca
      241 gaccgagcgc ttcttcgcgg ccgagatcgt gcgcgagcag gtgctgaacc tgacgcacga
      301 cgagctgccg ttttccacga ccgtcgtcgt cgatcagttc gacgagacgg gcgacgacgg
      361 catcacgaag atctactgca ctattctggt ggaccgcgag tcgcagaagc cgatcgtcgt
      421 cggccgcggc ggcgcgatga tcaaggcgat cggcaccgcc gcgcgcgccg aaatggagcg
      481 cgagatggaa cggcgcatct atctcgacct gcacgtgaag gtgaaggccg agtggcgcga
      541 caacgaacgg ctgctcgacg acatcgacaa gcagaaccgc gtgaccgaat agcgccgttg
      601 acggactaga atgctccccc cggcaggagg acgcatgggc gagaacgaag cgttggtgcg
      661 gcggtggttc cgggacgtgt ggaaggccgg cggcgagacg accgtggacg aactgctggc
      721 gccgaacatc gaggggttcc tggaaggacg gaacatccac acctcggcgg agttccagga
      781 atcccggcgg caactgttgg acgcatttcc cgatctcgcc gtagaggtcg aggacgtcgt
      841 ggaacagggc gatcgggcgg tgattcgctg gcgatgccgt gcgacgcaca agggcggtgg
      901 gctcggcatt ccggccacgt tcaaacaggt cgcgttccgc gggatgacct gggtcgagat
      961 ccagaacggc cagatcgtgc gcggctggga cagctggaac cagggcgccc tggtgcagtc
     1021 gctgatgggc ccggcggccc gagtcgggta atggcgcggt tggccgttct cctggcgctc
     1081 gccctgcccg cggttgccgg tgcgcagggc ctgtcggccg acgcgcgagc gaaggcagag
     1141 cagatctgga accgctacgt cgcgctcgag gcggcgttcg accccgccgt cgccgatctg
     1201 tatgccgatg acgccgtgat ccggaaccgg cgcacctatc cgacgggtga ggtgcgcgaa
     1261 gccacggtgc cggccgccca atacaaggtg ctggtgcgga cggcgatccc gattgcgcgg
     1321 gcgcggaacg acatcagccg ctactccggg tgcacctacg cagccgaagg cgcgcgggtc
     1381 cgtgtggcgt gcgcgcgctt ctcgacgctg aagaactaca cgtcgcccat ctcggtcctg
     1441 gtcggcccgg gccctgccgg cgcgtggctc atcttcgagg agatatcgga atcgcgcccg
     1501 tgaccggtgc ggacgaagcg ctcgtgcggc aagtcatggc gctggcgcgc gaagcgcgcg
     1561 aggcgggcaa ccatccgttc ggctcgctcc tctcgctcga cggcgtcgtg gtgctgacgg
     1621 ccaggaacac cgttcacacc gaccgcgatc cgaccgcgca cgcggagacc aatctgctcg
     1681 ccgaagcgat tcgccggctg acgccagacc agatcgcgcg cagcgtgctc tacaccagtt
     1741 gcgagccatg tgcgatgtgc gtggggaaga tgtattgggc cggcatccgc acgatcgtct
     1801 acgcgctgcc ggccacggag cttgccaggc ttgcgggcgg cagctttctg gtgccgtgcc
     1861 gcgatctgct cgcgcgtgcc aaagatcgcg tagccgtcat cggaccgttg ctcgtcgacg
     1921 aagcacgggt cgttcatgaa ggcttttggt agaaccaccg tcaccgtcgt gacgctggcg
     1981 ctggctggtg ttgtcgcccg cgcacaggtg ccgccggcgg cgcaacaggt cgccaccgcg
     2041 gctggcatca cagctccggt gattgccgcc tgtcaggggc agttccgccc gggccagcgc
     2101 ggatgggcgg tggccgccaa cgggcgctac atcgtcatcg atggcctggg cgcggccgtg
     2161 gaactggccg cgttcaccgg caagccggac ctgtcgtgct attcgcgcgc agaggcgctc
     2221 gaactcgatc gcagcatcca gcggtccgac acgttgagcg gccggatcgc gccgcgcgtc
     2281 gacacggcgg tgatctgtgc gttcgtcgag gcaacggccg cgaggtgctg gcagtactcg
     2341 cctgcagagc gcgtcttcgt cgacgtgggt ggatggacga cataggagca aggaggaccg
     2401 catgcgcgtt cgcgtcgcgt cgttgaccgt gctgtgcctg actgtcgcca ccatggcttc
     2461 cgcccagcgc tggcagccgc cggccgacac cgagcggtgt ccctcgaagt gggggccaca
     2521 ggatcagcgt ggcgcgggca accatatgaa gccggagacc gtgctcaagg cggcgcggct
     2581 gatcaagacc ggtgaagtct tcgagctggg ccgcgtcctc tcggacacca tgccgctccc
     2641 ggcgggccgg cgcttcgagg tctttaccaa gcggacgcgg aacgatcccg ggcgtaatcg
     2701 ccgcggttcg aacgaggagc tcgtggtgtc cgagatcggg caggtgggca cgcagttcga
     2761 taccttcagc caccagatga tcgggtcgag catgtacaac tgcgtcacgc tcgacgcggc
     2821 ggccagccgc accggtttca accgcctgag cgtggaccag gtgggcacgt tgttcacgcg
     2881 gggcgtgctg ctcgacatcg cggcgctcaa gggcgtggcc gcgctggcgg acacgtacga
     2941 gatcaccccg aaggacctgc aggacgcgct ggcggcgcaa aagctcacgc tgcagccggg
     3001 ggacgcggtt ctcattcaca ccggctgggg cacgctgtgg gggaaggaca acgcgcgcta
     3061 tcagcgcgtg agccccggca tcggcacggc cgcggccgaa tggctggcga aacaggaccc
     3121 gatgctggtc ggcgcggaca acacggcggt cgagatctcg ccgaacccgg atcccgacct
     3181 ggcggggccg gtgcaccaga tcatgctggt cgtgaacggc atccatctgc tcgagaacct
     3241 gcgtctcgac gagctggcgg cgcggcgcgc ctatgaattt gcgctcatcg tcgagccgct
     3301 gaagattcaa ggcggaacgg gctcgaccgt ggcgccggtg gcggtccggt agatgtaacc
     3361 aattccgccg gctcgagtaa gcagcttcat gatgaagtct gctctcgccg gcggaatcat
     3421 gctcctcgcg atcgcggttc ctctcaggtc gcagccgccc gcggtctgga aggaccccgc
     3481 gtcccattcg acccgattca tcccgg
//
LOCUS       DASSYW010000748         4444 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1446641, whole genome shotgun sequence.
ACCESSION   DASSYW010000748 DASSYW010000000
VERSION     DASSYW010000748.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4444)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4444)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4444
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1446641"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..453
                     /locus_tag="VFN38_11920"
     CDS             <1..453
                     /locus_tag="VFN38_11920"
                     /inference="COORDINATES: protein motif:HMM:NF012563.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008184 - glycogen phosphorylase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen/starch/alpha-glucan phosphorylase"
                     /protein_id="HET9012517.1"
                     /translation="KIVYLENYEMALAHKMVAGVDLWLNNPMKPLEASGTSGMKAAMN
                     GVPSFSVLDGWWVEGHVEGVTGWSIGGPELEADPTRDAVDLYIKLERVILPLFYGLPF
                     AYAEVMRSAIALNGSFFNTQRMVGQYVHNAYFPNGASNASPAEAIALI"
     gene            611..1531
                     /locus_tag="VFN38_11925"
     CDS             611..1531
                     /locus_tag="VFN38_11925"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane glutamic
                     endopeptidase"
                     /protein_id="HET9012518.1"
                     /translation="MPEDRPSSPFDRLRTRWLVVQFLLLMAAALLVYDRLGRVAGAGG
                     AAFGGNERLGATLVYCALGLVLLVRGKFARLNWRGLFGRLPTRAELPLLAVVVPVDLL
                     TLGATMAVFIPLSYVAPRFVERIVLGPNDLLDARSFGQWLGVVLLASVVAPFVEELFF
                     RGILLHRWARRWGTGTAVVASSLLFAVLRGEWIGHFLFGVAMCALYLRSRTLWLPILA
                     HAVSNLAIALTGLPDALSHAPSEPDTLASLRSQWPFGVLALAAGAVLLWWYVRRYWAS
                     SRLRAVFAGPVPYDVYAASATGSPDSTSAS"
     gene            complement(1483..2514)
                     /locus_tag="VFN38_11930"
     CDS             complement(1483..2514)
                     /locus_tag="VFN38_11930"
                     /inference="COORDINATES: protein motif:HMM:NF015651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase transmembrane
                     domain-containing protein"
                     /protein_id="HET9012519.1"
                     /translation="MTPTRWLLTALSFAATIGVSLYMILGWSQQGTSLLLPPRAHLFA
                     MLAVAVEVLARALKIRWSAQAAGIRLPLGTALRTCLGGDFGAAITPARSGAEPARFFI
                     LAESGLASASVLVILYAELFLEVFSLAAVVLAVAIVFRHAGAVVLTLVGLVGTYAAVI
                     LGIGAAALFLSRRNASGPPPRWARRLRLHAGRWRTVQRALRKLRATIDSVEHVDPRPA
                     IAAFFASVVHVGIRLTVLPALVLTSVAAAPLAPLALWPLGFLYGAAVVPAPGGGGAVE
                     MAFRAALGDAIPISLFAAALVWWRFYTFYIYILLGAVAAGSTVLRAVRRTEDYEAEVE
                     SGEPVAEAA"
     gene            2641..3312
                     /locus_tag="VFN38_11935"
     CDS             2641..3312
                     /locus_tag="VFN38_11935"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HET9012520.1"
                     /translation="MSRYAFSTTVRRTGRVTHGQQRTIDLVSGRERVPAIWLTPTANA
                     PVPAALLLHGFSSSKERMAQAIGRALLAHGVASLALDLPFHGERDGADREIPKNPLAL
                     VSAWKTAVAESRAATEWLIAQPEVDDGRIGVVGYSLGGFLALMTAAEEERLGVVALAA
                     AGDLPDRTPYAALVRSLIDPLRAAARLDGRPLLLVNGRRDTTTRPAQAERLFAAAHEP
                     KTLRW"
     gene            complement(3495..>4444)
                     /locus_tag="VFN38_11940"
     CDS             complement(3495..>4444)
                     /locus_tag="VFN38_11940"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HET9012521.1"
                     /translation="AVCGGAEATEVASPDAMKAEVEALWAFHSRRLRPETPSAQLMDR
                     VAFSQHAPLRVVRCTACGLVYRNPVERATELSSSYEDESPTTERMRALHETQRASYAA
                     QAARLTRVFGRHGSGIEVGSYVGAFLASARDAGWRFSGVDVNACANRFTRSLGFAVHD
                     GPIESLDPTRRADVVAIWNCLDQLADPSSAIRAARRHLAPGGMIAVRVPNGECYASMR
                     PLLGTRLAPLAREWLAQNNLLGFPYRFGFTPASLARLLARQGFEVQHVEGDVLVPIAD
                     RWTRPWARVEERALKGMMRLVARISRARAPWFEMYARLV"
BASE COUNT          635 a         1570 c         1620 g          619 t
ORIGIN      
        1 aagatcgtct acctcgagaa ctacgagatg gcgctggcgc acaagatggt ggccggcgtg
       61 gatctctggc tgaacaaccc gatgaagccg ctcgaggcgt cgggcacgag cggcatgaag
      121 gcggcgatga acggcgtgcc ctccttctcc gtgctggacg gctggtgggt ggaagggcac
      181 gtcgagggcg ttaccggctg gtcgatcggc ggcccggagc tcgaggccga tccgacgcgc
      241 gacgcggtgg acctgtacat caagctggag cgcgtgatcc ttccgctctt ctacggtctc
      301 cccttcgcct acgccgaggt gatgcgctcg gccatcgcgc tcaacggcag cttcttcaac
      361 acgcagcgga tggtggggca gtacgtgcac aacgcgtatt tcccgaacgg cgcctccaac
      421 gcctcgccgg cggaagccat cgcgctgatc taaaagctgt gtcatcccgc acgtgcgtcg
      481 ccgaaggcgg agcacgtgtc gggatccact gtccttgcac cggagccagc ttcaagcagt
      541 gacagtagat cccgacactc gctcgctgcg ctcgctcgtg cgggatgaca ggccgtcgtc
      601 tcgcccgctc gtgccggagg acaggccgtc gtcgccattc gaccggctgc gcacgcggtg
      661 gctggtcgtg cagttcctgc tgctcatggc ggcggcgctg ctcgtgtacg accggctcgg
      721 ccgcgtggcc ggagcgggcg gcgcggcgtt cggcggcaac gagcgccttg gcgcgacgct
      781 cgtgtactgc gcgctcggcc tcgtgctcct cgtgcgcggg aagttcgcgc gactgaactg
      841 gcgcgggctc ttcggccggt tgccgacgcg tgccgaactg ccgctgctcg ccgtcgtcgt
      901 cccggtggac ctgctcacgc tgggcgccac gatggcggtg ttcatcccgc tctcgtacgt
      961 ggcgccgcgg ttcgtcgagc gaatcgtgct cgggccgaac gacctgctcg acgcgcgctc
     1021 cttcgggcag tggctgggcg tcgtgctgct cgcgtcggtg gtggcgccgt tcgtcgagga
     1081 gctgttcttc cgcggcatcc tgctccaccg ctgggcgcgg cgctggggca ccggcaccgc
     1141 cgtcgtcgcc agctcgctgc tgttcgccgt gctgcgcggc gagtggatcg ggcactttct
     1201 cttcggcgtc gcgatgtgtg cgctctacct gcgctcgcgc accctctggc tgccgatcct
     1261 cgcgcacgcg gtgagcaatc tcgccatcgc gctcaccggc ctgcccgatg cgctgagcca
     1321 tgcgccgtcg gagccggaca cgctcgccag cctgcgctcg cagtggccgt tcggagtgct
     1381 cgcgctcgcg gccggcgccg tgctcctgtg gtggtacgtg cggcgctact gggcgagcag
     1441 ccggctgcgt gcggtgttcg ccggccccgt gccgtacgac gtctacgccg cctcggccac
     1501 cggttctccc gactccactt ccgcttcgta gtcctccgtg cggcgcacgg cacgcagcac
     1561 cgtgctcccc gccgccacgg caccgagcag gatgtagatg tagaaggtgt agaagcgcca
     1621 ccagacgagc gcggcggcga agagcgagat cgggatcgcg tcgccgagtg ccgcgcggaa
     1681 ggccatctcc acggccccgc cgccgccggg cgccggcacc accgccgcgc cgtacaggaa
     1741 gccgagcggc cagagggcga gcggcgcgag cggggccgcg gcgacgctcg tgagcacgag
     1801 cgcggggagc acggtgaggc ggatgccgac gtgcaccacc gacgcgaaga acgcggcgat
     1861 ggccggtcgc gggtcgacgt gctccaccga gtcgatggtg gcgcggagct tccgcagcgc
     1921 gcgctgcacg gtgcgccagc ggccggcgtg caggcgcagt cgccgcgccc agcgcggcgg
     1981 cggaccgctc gcgttgcgcc gcgacaggaa cagcgccgcc gcaccgatgc cgaggatgac
     2041 cgcggcgtac gtccccacga gccccacgag cgtgaggacg accgcgccgg cgtggcggaa
     2101 gacgatcgcc accgcgagca ccaccgcggc gagcgagaac acctcgagga agagctcggc
     2161 gtagaggatc acgagcacgc tggccgaggc gagccccgac tcggcgagga tgaagaagcg
     2221 cgccggctcg gcgccgctgc gggcgggcgt gatggccgcg ccgaaatcgc cgccgaggca
     2281 ggtgcgcagc gccgtgccca gcgggaggcg aatgcccgcg gcctgggcgc tccagcggat
     2341 cttgagggcg cgggccagca cttccaccgc caccgcgagc atggcgaaca ggtgcgcgcg
     2401 cggcggcagc aggagggagg tgccctgctg cgaccagccc aggatcatgt agagcgagac
     2461 tccgatcgtc gcggcgaagg agagcgcggt gaggagccag cgggtgggcg tcatcaggcg
     2521 ggcagccggg gcatcgatgg aaggtacagc gcggaaggca gtgtggcgcc gggcgaactg
     2581 ctgcggcgaa cggccgtccg cgtcgtacag agggcgaaca tcttgccctt ctcgtcacac
     2641 atgagtcgct acgccttctc cactacggtg cgacgcacgg gacgtgtcac gcacgggcag
     2701 cagcgcacga tcgatctggt gagcgggcga gagcgcgtgc cggcgatctg gctcaccccc
     2761 accgcgaacg caccggtgcc cgccgcgctg ctgctgcacg gcttctcgtc gagcaaggag
     2821 cggatggcgc aggcgatcgg acgcgcgctg ctggcgcatg gtgtcgcgtc actggcgctc
     2881 gacctcccct tccacggtga gcgcgatggc gccgaccgtg agatcccgaa gaacccgctc
     2941 gcactggtga gtgcctggaa gacggcggtc gccgagtcgc gcgcggcgac ggagtggctg
     3001 atcgcacagc ccgaggtcga cgacggccgc atcggcgtcg tgggctactc gctcggcggc
     3061 tttctcgcgc tgatgacggc ggccgaggag gagcgactcg gagtcgtcgc gctcgcggcg
     3121 gcgggcgatc tccccgatcg cacgccgtac gccgcgctgg tgcggagcct gatcgatccg
     3181 ctgcgtgccg cggcccggct cgacggccgt cccttgctgc tcgtcaacgg ccggcgggac
     3241 acgacgacga ggcccgcgca ggcggagcgc ctgttcgccg ccgcacacga gccgaagacg
     3301 ctgcggtggt aggagggcgg ccactggccg cccccggccg cgatcgaggg cacggccagg
     3361 tgggtggcag cgcagctttc atcgggatga gcggccgagg tacaaatcaa ccgatcttca
     3421 tcgtggaccg acgcggccgc ggatctccgc gaaaattctc cgcgtgaatc tggtcgccgt
     3481 acgcggcacg gccgtcacac caatcgcgcg tacatctcga accacggcgc cctcgcgcgc
     3541 gagatgcgcg cgacgagccg catcatcccc ttgagcgcgc gctcttccac gcgcgcccac
     3601 ggccgcgtcc accggtcggc gatcggcacg agcacatctc cctcgacgtg ctgcacctcg
     3661 aacccctgcc gcgcgagcag ccgggcgagc gatgcggggg tgaagccgaa gcgatacggg
     3721 aagccgagca ggttgttctg cgccagccac tcccgcgcca gtggcgccaa ccgcgtgccg
     3781 agcagcgggc gcatgctcgc gtagcattcg ccgttgggca cgcgcaccgc gatcatgccg
     3841 cccggcgcca ggtgccggcg cgccgcccgg atggccgacg acgggtcggc gagctggtcg
     3901 aggcagttcc agatcgccac cacgtcggcc cgccgcgtcg ggtcgagcga ctcgatcggt
     3961 ccgtcgtgca cggcgaagcc gagcgagcgg gtgaaccggt tggcgcaggc gttgacgtcc
     4021 acgccggaga agcgccaccc ggcgtcgcgc gccgaggcga gaaaggcgcc cacgtagctc
     4081 ccgacctcga tgccgctgcc atgccgaccg aacacgcggg tgagccgcgc cgcctgcgcc
     4141 gcgtaggatg cccgctgcgt ctcgtgcagc gcccgcatac gctcggtggt ggggctctcg
     4201 tcctcgtacg acgacgacag ctcggtggcc cgctcgacgg ggttccgata caccagcccg
     4261 cacgcggtgc accgcacgac gcgcagcggg gcgtgctgcg agaaggctac gcggtccatg
     4321 agctgcgcgc tcggcgtctc cgggcgcagg cgccgggaat ggaaggccca cagcgcctcg
     4381 acctccgcct tcatcgcgtc gggcgacgcc acctcggtcg cctcggcgcc gccacagacg
     4441 gcgc
//
LOCUS       DASSYW010000749         4652 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_637137, whole genome shotgun sequence.
ACCESSION   DASSYW010000749 DASSYW010000000
VERSION     DASSYW010000749.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4652)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4652)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4652
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_637137"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1061)
                     /locus_tag="VFN38_11945"
     CDS             complement(<1..1061)
                     /locus_tag="VFN38_11945"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HET9012522.1"
                     /translation="MRVLPSFAVDLSTWPGVVLRVEAGGDVVASNGRLEARLGVEVTG
                     RPLSALLDADSSLAKWRRVAASADAPTCELVFASDARMLETSAYTVVREDDGWWLVEH
                     PLTPRLAELANEVSSVNTELASTQRRLVIQQARLAHAMTELERSNLALDEFAHAVSHD
                     LKAPLRAIREYAEGLVDAPQSLAPAEREADLRRIGELAARMRSMIDGALAYARAGRVA
                     DRVERVDTAAMLRELVTFLAPPADATIRLGDDLPVIETERVPLEQVFRNLLSNAITYR
                     RESDARIEVTAHDAGDRWEIVVSDNGPGIPESQQPRIWQLFHTSRPGEGSGVGLALVK
                     RIVESHGGEIGVRSVPGQGA"
     gene            complement(1064..1723)
                     /locus_tag="VFN38_11950"
     CDS             complement(1064..1723)
                     /locus_tag="VFN38_11950"
                     /inference="COORDINATES: protein motif:HMM:NF014375.4"
                     /note="Presence of a B(12) (cobalamin)-binding domain
                     implies dependence on cobalamin itself, in one of its
                     several forms, or in some unusual lineages, dependence on
                     a cobalamin-like analog; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-dependent protein"
                     /protein_id="HET9012523.1"
                     /translation="MSVAHVRYLDALRRGDRHAAYRALDEALDDGRELGQVYLDVVQP
                     AMREIGRLWQEDELTVAEEHLATAITESAMSRMFERVFVWRDVRTPRLLAACAEEERH
                     QMGLRMLCDLLELAGWETTYLGASVPIESLVDLVRKHTPDAVAISATIAPHVPRVREA
                     IQAIRSANLDRQPVIAVGGRVFLGDPSLAERIGADLTAADAEQAVRVLDARLRRDHQA
                     A"
     gene            complement(1720..2118)
                     /locus_tag="VFN38_11955"
     CDS             complement(1720..2118)
                     /locus_tag="VFN38_11955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012524.1"
                     /translation="MTHGTDESVAARSAALLMRDRDALAQEVTAALYAESPELLERHG
                     ERGRGKCLQDMGYNIEHLIPAVDLGDGAMFARYVEWLDGLLRARNVATRDVIRCLELL
                     RDRCAARYPAAEASSIGGIIEAGLRVVSPS"
     gene            complement(2115..2453)
                     /locus_tag="VFN38_11960"
     CDS             complement(2115..2453)
                     /locus_tag="VFN38_11960"
                     /EC_number="1.14.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015925.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HET9012525.1"
                     /translation="MFLFISHLTVPPDDCAALERHFRERSHLVDSFPGFLYLQLLSPQ
                     GGGATHAFLTAWESRAAFSAYMRSREHAESHSREPAEIMGRTTVRHEAFEVLMDSRHV
                     EEWLPEAQAR"
     gene            2563..3804
                     /locus_tag="VFN38_11965"
     CDS             2563..3804
                     /locus_tag="VFN38_11965"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro peptidase family protein"
                     /protein_id="HET9012526.1"
                     /translation="MKRRAFLARSAALAGAAALAQRAHLLDAAPAVAAPGPDVVPISD
                     AERLARIDKAKRLMVEQGIDAMLLEGGTSMYYYTGVRWGNSERPFAVVIPARGEPAWV
                     TPAFEEARARELIKFSTDVRVWQEDESPYRVIAGILRDRGATGKVGIEERLRFFIYDG
                     VRQELPALQFVSATPVTAGCRMFKSPAEIALMQRANDITLQAIGSTFAALKEGMTNQQ
                     VSEAVAAATRKLGGKADGALVIFGKYTAFPHGSVQPQSLREGDVVLIDAGCTVEGYVS
                     DITRTSVFGKPTQRMLDVWEVERRAQDAALAAAQPGATCESVDAAARKVITAAGFGPG
                     YKVPGLPHRTGHGIGLDGHEWTNFVRGNTTRIAPGMCFSDEPTIAIYGEFGVRLEDCL
                     HVTAAGPKLFTPQQERLTTVS"
     gene            complement(3893..>4652)
                     /locus_tag="VFN38_11970"
     CDS             complement(3893..>4652)
                     /locus_tag="VFN38_11970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012527.1"
                     /translation="GTGPKAGQPISISFSTSGTAGASFSRSLDPAAPSFSTTGTADVL
                     TISKAQVVVARMELERVDAACTSDEAVGDDEHENEDDDCEELQLAPSIVDLPVGPNST
                     VVNAISVNIPEGSYSELKAKVRPLRSINGRGRGSAAFVAAHPEFDGVDIRVEGTFNGA
                     PFVYTGSVSANVERHFSPPLVVGATPLNVTVDVDLANWFKDRSGALIDPSTAKPGTVN
                     GTIVENNIRQSFRAFRDDDHNGHDDDDHGGEGRH"
BASE COUNT          703 a         1603 c         1664 g          682 t
ORIGIN      
        1 gccccctgtc cgggcaccga gcgcaccccg atctcgccgc catgggattc cacgatccgt
       61 ttcaccagcg cgagccccac cccgctcccc tcgccgggcc gcgacgtgtg gaacagctgc
      121 cagatgcgcg gctgctgcga ctcgggaatg cccggcccgt tgtcggagac gacgatctcc
      181 caccggtcgc cggcgtcgtg cgcggtgacc tcgatgcgcg catcggactc gcggcgatag
      241 gtgatcgcgt tcgagaggag gttgcggaag acctgctcca gcggcacccg ttccgtctcg
      301 atgacgggaa ggtcgtcgcc gagccggatc gtcgcgtccg cgggcggcgc gagaaaggtc
      361 accagctcac gcagcatggc ggcggtgtcc actcgctcga cccggtccgc cacgcggccc
      421 gcgcgcgcgt aggccagggc gccgtcgatc atgctgcgca tgcgggcggc gagctcgccg
      481 atgcgccgga ggtcggcctc gcgctccgcc ggtgcgagcg actgcggcgc atcgacgagc
      541 ccctcggcgt actcgcggat ggcgcgcagc ggcgccttga gatcgtgcga caccgcgtgc
      601 gcgaactcgt cgagcgcgag attgctgcgc tccagctccg tcatggcgtg cgccaggcgt
      661 gcctgctgga tcacgagccg ccgctgcgtg gaagcgagct cggtattcac cgacgagact
      721 tcgttcgcga gctcggcgag ccgtggcgta aggggatgct ccaccagcca ccacccgtca
      781 tcctcgcgca ccacggtgta cgcgctggtc tcgagcatcc gcgcgtcact ggcgaacacc
      841 agctcgcagg tgggcgcatc cgcgctggcg gccacgcgtc tccacttggc gagcgacgag
      901 tcggcatcga gcagcgccga cagcggccgc cccgtgacct ccacgccgag gcgcgcttcg
      961 agacggccgt tgctcgcgac cacgtcgccg cccgcctcca cccgcagcac gacgccgggc
     1021 caggtggaga gatcgacggc gaacgatggc agcacgcgca ccgtcacgcc gcctgatggt
     1081 cacgccgcag acgggcgtcg agcacgcgca cggcctgctc ggcatcggcc gcggtgaggt
     1141 cggcaccgat gcgctcggcg agcgaaggat cgccgagaaa gacccgcccg cccaccgcga
     1201 tcacgggctg ccggtcgaga ttggcgctcc tgatcgcctg gatcgcttcg cgcacgcgcg
     1261 gcacgtgcgg cgcgatcgtc gccgagatcg cgacggcatc gggcgtgtgc ttccgcacga
     1321 ggtccaccag gctctcgatc ggcaccgagg cgccgaggta ggtggtctcc catcccgcga
     1381 gctcgaggag atcgcacaac atccgcagtc ccatctggtg ccgctcctcc tcggcgcacg
     1441 cggcgagcag ccgcggcgta cgcacgtcgc gccagacgaa gacgcgctcg aacatccggc
     1501 tcatcgcgga ctcggtgatc gcggtggcga gatgctcctc ggccacggtg agctcgtctt
     1561 cctgccagag gcgtccgatc tcgcgcatcg ccggctgcac gacgtcgaga tagacctggc
     1621 ccagctcccg gccgtcgtcc agcgcctcgt ccagtgcgcg gtacgcggcg tgacgatccc
     1681 ctcggcgcag ggcgtcgaga tagcgaacgt gcgcgacgct catgacggac tcacgacgcg
     1741 gaggccggcc tcgatgatgc ccccgatgga cgacgcttcc gccgccggat agcgcgcggc
     1801 gcagcggtcg cgcagcagct ccaggcagcg gatcacgtcg cgcgtcgcca cgttccgggc
     1861 gcgcaggaga ccgtcgagcc attcgacgta ccgggcgaac atcgcgccgt cgccgagatc
     1921 cacggcgggg atcagatgct cgatgttgta tcccatgtcc tggaggcact tcccgcgacc
     1981 ccgttctccg tgccgctcca ggagctcggg cgattcggca tagagggcgg cggtgacttc
     2041 ctgcgccagc gcgtcgcggt cgcgcatgag cagcgccgcg ctgcgcgcgg cgacgctctc
     2101 gtcggtgccg tgcgtcatcg tgcctgggcc tccggcagcc actcctcgac gtggcgcgag
     2161 tccatgagca cctcgaacgc ctcgtgccgc acggtggtgc ggcccatgat ctcggccggc
     2221 tcgcgcgagt gcgactcggc gtgctcgcgg ctgcgcatgt acgcactgaa cgccgcgcgt
     2281 gactcccacg cggtcaggaa cgcgtgggtc gcgccgccac cctggggcga gaggagctgc
     2341 agatagagga agccgggaaa ggagtccacc agatgagacc gctcccgaaa atgacgttcg
     2401 agtgcggcgc agtcatcggg cggaaccgtg agatgcgaga tgaagagaaa catggagcgt
     2461 ccgaaagact atcgattggc atcgccgggg gcgacacggc gacacaagca acggctgtgc
     2521 cggctggttg cgggcggagt tgccgagcgc cagcattccc gcatgaaacg acgtgccttt
     2581 ctcgcccggt ccgccgccct cgcgggcgcc gccgcgctcg ctcagcgcgc ccatctcctg
     2641 gatgccgctc cggccgtcgc cgcgccgggc cccgacgtcg tgccgatcag cgacgccgag
     2701 cgactcgcgc gcatcgacaa ggcgaagcgc ctgatggtcg agcaggggat cgacgcgatg
     2761 ctcctcgagg gcggcacgag catgtactac tacaccggcg tgcggtgggg gaacagcgag
     2821 cgcccgttcg ccgtcgtgat cccggcgcgc ggcgagccgg cgtgggtcac gccggcgttc
     2881 gaggaggcgc gggcgcgcga gctgatcaag ttctccacgg acgtccgcgt ctggcaggag
     2941 gacgagagtc cctatcgcgt gatcgccggc atcctgcgcg accgcggagc gacgggcaag
     3001 gtcgggatcg aggagcggct gcgcttcttc atctatgatg gcgtgcgaca ggagctgccg
     3061 gcgctgcagt tcgtcagcgc cactccggtc acggcaggct gccggatgtt caagtcgccg
     3121 gcggagatcg cgttgatgca gcgcgcgaac gacatcaccc tccaggcgat cggaagcacc
     3181 ttcgcggcgc tgaaggaggg gatgacgaac cagcaggtct ccgaggcggt cgccgcggcg
     3241 acgaggaagc tcggcggcaa ggccgacggc gcgctggtga tcttcgggaa gtacaccgcc
     3301 tttccgcatg gcagcgtgca gccgcagtcg ttgcgcgagg gcgacgtcgt gctgatcgac
     3361 gccggctgta ccgtggaggg gtacgtctcc gacatcacgc ggacatcggt gttcggcaag
     3421 ccgacgcagc gcatgctcga cgtctgggag gtggagcggc gggcacagga cgcggcgctc
     3481 gcggcggctc agcccggcgc cacctgcgag tcggtggacg ccgcggcgcg gaaggtcatc
     3541 accgccgccg gtttcgggcc cggctacaag gtgccggggc tgccgcaccg cacggggcac
     3601 ggcatcgggc tggacgggca cgagtggacg aacttcgtgc gcggcaacac gacgcgcatc
     3661 gcgccgggga tgtgtttcag cgacgaaccc acgatcgcga tctatggcga gttcggggtt
     3721 cggctcgagg actgcctgca cgtcacggca gcggggccga agctgttcac cccgcagcag
     3781 gagcggctga cgacggtgtc gtgagcgggt tgtcgtcctg agtcgaaggc gaaggacctg
     3841 cacccgacga caggtgcagg tccttcgcgt tgctcagggc gataggacga tgctaatgcc
     3901 ggccttcccc gccgtgatcg tcgtcgtcgt gaccgttgtg gtcgtcgtcg cggaaggcgc
     3961 ggaacgactg ccggatgttg ttctccacga tcgtcccgtt cacggtgccg ggcttggccg
     4021 tgctcggatc gatcagcgcg cccgagcggt ccttgaacca gttcgccaga tccacgtcga
     4081 ccgtcacgtt gagcggcgtg gcgcccacga cgagcggcgg agagaagtga cgctccacgt
     4141 tggcggacac ggacccggtg tagacgaacg gcgctccgtt gaaggtgcct tcgacgcgga
     4201 tgtccacgcc gtcgaactcg ggatgcgcgg cgacgaacgc cgccgagccg cggccgcggc
     4261 cgttgatgga ccggagcggg cgcaccttcg ccttcagctc cgaatagctc ccctcgggga
     4321 tgttcaccga gatggcgttc acgacggtgc tgttcggccc caccggcagg tcgacgatcg
     4381 acggcgcgag ctgcagctcc tcgcagtcgt cgtcctcgtt ctcgtgctcg tcgtcgccca
     4441 ccgcttcgtc gctcgtgcag gcggcgtcga cgcgctcgag ctccatgcgg gcgacgacga
     4501 cctgggcctt cgagatggtg agcacgtcgg ccgtgccggt cgtcgagaag ctcggcgccg
     4561 cgggatcgag cgagcgggag aacgatgcgc cggcggtgcc tgacgtgctg aacgagatgg
     4621 agatcggctg cccggccttc ggcccggtgc cg
//
LOCUS       DASSYW010000750         2152 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_627452, whole genome shotgun sequence.
ACCESSION   DASSYW010000750 DASSYW010000000
VERSION     DASSYW010000750.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2152)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2152)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2152
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_627452"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..306
                     /locus_tag="VFN38_11975"
     CDS             <1..306
                     /locus_tag="VFN38_11975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012528.1"
                     /translation="PALEVARVAQRTDLAGVYEAGGDVHVRFHVGTTTPRLFLGVYDV
                     RGRLLRVLSDAPRDTGEHLLVWNERDASGAAVARGIYVVALRSVDANATRKVALLGR"
     gene            424..1347
                     /locus_tag="VFN38_11980"
     CDS             424..1347
                     /locus_tag="VFN38_11980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012529.1"
                     /translation="MLTVPVAAFCAATLLTMRPSSTVAAPPEGGAPADTTIVVVEEHH
                     DHHYSMHYAWRHARPMIGIQYGFGDVDRDGFGGELAPVGALDVQLGYRAERRFGGEDA
                     LLHQSTHYAHVGNLASRLASDSPGPSEVGTDMWRFGGGFGDGYGYRFASQRGRFILQS
                     SGTIAWYTLELEGEAAGGLSPVDAVSLEQFTSHTRFGESWESAFEVGFGDMLALHAGY
                     ELTAVFPSFKIWYWLLSTGIDRGALIAVGMFVDEVEDASPFAAPIVRFLLEGALQYGF
                     YELRNEEVNWPFETEAPLAYDLFKLGLTTRF"
     gene            complement(1469..>2152)
                     /locus_tag="VFN38_11985"
     CDS             complement(1469..>2152)
                     /locus_tag="VFN38_11985"
                     /inference="COORDINATES: protein motif:HMM:TIGR04183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031240 - external side of cell outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="T9SS type A sorting domain-containing protein"
                     /protein_id="HET9012530.1"
                     /translation="DGQLSFTFDRGAGSAFVDFTPDLYALNGGCPIIRNYDGIDALGG
                     SAVRTHRYRSPTSGTLGAGAVVMNRNNAEAWNTIQMTHPWFDIRDTAGTPAATPPELS
                     LLTKILGAVLPTPCLKSPQTTGTGPGDELDVPRTTSLHQNVPNPFNPTTQIRFDLAQS
                     GKVSLRIYDVAGHLVRTLVDRELAAGRDHRVAWNGLDIHDRPVASGVYFYRLEAPGAS
                     ETRKLVVMR"
BASE COUNT          340 a          715 c          748 g          349 t
ORIGIN      
        1 ccggcgctcg aagtggcgcg ggtggcgcag cgcaccgatc tcgccggggt gtacgaagcc
       61 gggggtgacg tgcacgtccg cttccacgtc ggcacgacga cgccacggct cttcctcggc
      121 gtgtacgatg tccgcggcag gctgctgcgc gtgctgagtg atgcgccgcg ggacacgggc
      181 gagcacctcc tcgtctggaa tgagcgcgac gcgagtggcg ccgccgtcgc gcgcggcatc
      241 tacgtggtgg cgctccggag cgtcgatgcc aacgccacac gcaaggtcgc actcctcggg
      301 cggtgaggcc gggagcgcga aggcgctcca gaaccctgcc taagtttcgt gcgtattgct
      361 acggtggaac cacggcacag gtgccgagag gctcgccaca aaaggagaga agcggtgcga
      421 tcgatgctga ccgtccctgt cgccgcgttc tgcgcggcga cgctgctgac catgcggccg
      481 tcgtccaccg tcgccgcccc gcccgagggc ggcgcgccgg cggacaccac gatcgtcgtg
      541 gtcgaagaac accatgacca ccactactcg atgcactacg cgtggcgtca tgcgcgcccc
      601 atgatcggca tccagtatgg cttcggcgac gtggaccgcg acggcttcgg gggcgagctg
      661 gcgccggtcg gggcactcga cgtgcagctc ggctaccggg ccgagcggcg cttcgggggt
      721 gaggacgcgc ttctccacca gagcacgcac tacgcccacg tcggcaatct cgccagccgg
      781 ctcgcgagcg actcgcccgg accgtccgag gtcggcaccg acatgtggcg gttcggcggt
      841 gggttcggcg atggctacgg ctaccgcttc gcctcgcagc gcggccgctt catcctccag
      901 agttccggca ccatcgcctg gtacacgctc gagctggaag gcgaggccgc gggcggactc
      961 tctccggtgg acgccgtgtc cctcgaacag ttcaccagcc acacgcgatt cggtgagtcg
     1021 tgggaatcgg cattcgaggt cggcttcggc gacatgctgg cgctgcatgc gggctacgag
     1081 ctcaccgccg tgttcccgag cttcaagatc tggtattggc tgctctcgac tggcatcgac
     1141 cgcggcgccc tcatcgcggt cggcatgttc gtcgacgagg tcgaggacgc atccccgttc
     1201 gcggcgccga tcgtgcgctt cctgctcgaa ggcgcgttgc agtacggctt ctacgagctc
     1261 cgcaacgagg aagtgaactg gccgttcgag accgaggcac cgctcgccta cgacctgttc
     1321 aagctcgggc tcaccacccg cttctgatcc gacggcggac gcagctccaa gcgaagccgt
     1381 tccagagagc gagattgccg ggtgttgctc ccgcactcgt ggaacggcct cggactgcga
     1441 gggaggcctc gaacccaagc gccgcggttc agcgcatgac caccagcttg cgcgtctcgc
     1501 tcgccccggg cgcttcgagg cgatagaagt agacgccgct cgccaccggg cggtcgtgga
     1561 tgtcgaggcc attccaggcg acgcggtgat cgcggcccgc ggccagctcg cgatcgacga
     1621 gggtgcgcac caagtgcccg gcgacgtcgt agatccgcaa cgagaccttg ccgctctggg
     1681 cgaggtcgaa gcggatctgg gtcgtcgggt tgaacgggtt cggcacgttc tgatgcaggg
     1741 acgtcgtccg cggaacatcg agttcgtcgc caggaccagt acccgtcgtc tgcggcgact
     1801 tcaggcaggg agtcggcagg accgcgccga gaatcttcgt caggagtgag agctccggcg
     1861 gagtcgcggc gggcgtgcca gcggtgtcac ggatgtcgaa ccacgggtgc gtcatctgga
     1921 tggtgttcca ggcctcggcg ttgttgcggt tcatgaccac cgcgccagcg cccagcgtac
     1981 ccgacgtcgg gctgcgatac cggtgcgtgc gcaccgcgct accacccagg gcatcgatgc
     2041 catcgtagtt acggatgatc gggcagccac cgttgagtgc gtacagatcc ggagtgaagt
     2101 cgacgaaagc cgagccggca cctcgatcga aggtgaagct caactggccg tc
//
LOCUS       DASSYW010000751         3081 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_758274, whole genome shotgun sequence.
ACCESSION   DASSYW010000751 DASSYW010000000
VERSION     DASSYW010000751.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3081)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3081)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3081
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_758274"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(127..1557)
                     /locus_tag="VFN38_11990"
     CDS             complement(127..1557)
                     /locus_tag="VFN38_11990"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HET9012531.1"
                     /translation="MSRFTPTGRLRTTLALTAVAALAACSDSPVTSSTMEAPESAAYA
                     RAAADEPVVAGQVIVKLRDGESLDALASTHGVGKGAQGYGHAFDIVLTTRGNERAMAA
                     RLAADPRVEYAEPNWIRHTDAVDSRLWAFYNPGGLHMSFFNDPNGRTGPLPSTYASIS
                     DADEDNVSGYAANGGDVTIGSIDTGVDFNHPEFSGRLIAGCDWYSMAAAGNGSATCTD
                     FTPYDTPDEGHGTHTTGTMAGTNVGVAGVSGASPHVKVYVQRVCGANGCPTSAIINAI
                     NAAADYLDANGNHLVAVNMSLGGRTESTGEKNAILKAKNAGVLVVASAGNSGSGKVAC
                     PACDPNAISVAATTWQDQLAAYSQSGSGLDLSAPGGYCYSNTTEDGCILSSVVSGYQG
                     GRTYSISGSSGTYAYMMGTSMAAPQVTGTAAIVASKAGLRSAALRTRLETTADDLGAA
                     GYDTKFGNGRINSYRAVTGATLTAPQ"
     gene            2073..>3081
                     /locus_tag="VFN38_11995"
     CDS             2073..>3081
                     /locus_tag="VFN38_11995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HET9012532.1"
                     /translation="MAMRLDRLLPPLALLAALTAMHPSAAAAQNAALYRAATDRLIDA
                     ATKDSAAWNRIAELTDTFGHRLSGSEALERAIDWTLARMRSDGLENVRGEPVMVPHWV
                     RGEESAELVAPRRKAMTMLGLGGSVGTPAGGLTAPVLVVTSFDDLQKRAADARGKIVL
                     FDVPFTTYGQTVAYRGAGAAAASRAGAVAMLLRSVASFSMNSPHTGSMRRDTTATPIP
                     AAAITVEDAMLLHRLQDRGVTPSVHLTMNARTLPDAPSRNVVAELRGRELPDEVVVLG
                     GHIDSWDVGQGAMDDAGGVVAAWEAVRLMKQLGLRPRRTVRVVGWTNEENGTRGGIGY
                     RN"
BASE COUNT          445 a         1037 c         1104 g          495 t
ORIGIN      
        1 cgtgtttctg gtgaaggcgg cgtactggat gggacggtga attggtgatc ggttatcggt
       61 gaacggtaat cggccggcct cgagatgcat cccgaggccg gccgagaacc gacgaccgat
      121 gacgtcttat tgcggggccg tcagcgtcgc tcccgtcacc gcgcgatagc tgttgatgcg
      181 gccgttgccg aacttcgtgt cgtagcccgc cgcgccgaga tcgtcggccg tggtctcgag
      241 acgagtgcgc agcgccgcgc ttcggaggcc ggccttcgac gccacgatgg ccgctgtgcc
      301 cgtcacctgc ggcgcggcca tcgaggtgcc catcatgtag gcgtaggtgc cgctgctccc
      361 cgagatggag taggtccggc caccctgata gccggagacc acggagctga ggatgcagcc
      421 gtcttccgtc gtgttcgagt agcagtaccc gcccggcgcg gagagatcga gcccggaccc
      481 ggactgcgag tacgccgcga gctgatcctg ccaggtcgtc gcggcgaccg agatcgcatt
      541 cgggtcgcac gcggggcagg cgaccttacc ggagccggag ttgccggccg acgcgacgac
      601 gagaacgccg gcgttcttcg ccttgaggat cgcgttcttc tcgcccgtgg actccgtcct
      661 gccgccgagg ctcatgttca cggcgacgag gtgattgccg ttcgcgtcga ggtagtcagc
      721 agcggcgttg atcgcgttga tgatcgccga ggtcgggcat ccgttcgccc cgcagacgcg
      781 ctgcacgtac accttcacgt gcgggctcgc ccccgacaca ccggcgacgc cgacgttcgt
      841 gccggccatc gtgccggtcg tgtgcgtgcc gtgaccctca tccggcgtgt cgtacggggt
      901 gaagtccgtg cacgtcgcgc tgccgttccc cgccgcggcc atggaatacc agtcgcagcc
      961 ggcgatcagg cgcccgctga actccgggtg attgaagtcc acgcccgtgt cgatcgagcc
     1021 gatcgtcacg tcgccgccgt tcgccgcgta gccggagacg ttgtcctcgt cggcgtcgct
     1081 gatggacgca taggtggagg gcagcgggcc ggtgcggcca ttcgggtcgt tgaagaacga
     1141 catgtgcagc ccgcccgggt tgtagaaggc ccagaggcgc gagtccacgg cgtcggtgtg
     1201 gcgaatccag ttcggctccg cgtactccac gcgcggatcg gcggcgaggc gcgccgccat
     1261 cgcgcgctcg ttgccgcgcg tggtcagcac gatgtcgaac gcgtggccgt agccctgcgc
     1321 gcccttgccg acgccgtgcg tggacgcgag cgcatcgagg ctctcgccgt cgcgcagctt
     1381 gacgatgacc tgtccggcga cgaccggctc gtccgccgcg gctcgcgcgt aggcagccga
     1441 ctcgggcgct tccatcgtcg aggaggtgac gggcgagtcc gagcacgcgg cgagcgcggc
     1501 gacggcggtg agggcgagcg tggtgcgaag ccgaccggtg ggggtgaaac gcgacatcga
     1561 cgaattcctc ctggggtggt gacacacgct cgccaggatg acgagcgcaa agctccacgt
     1621 cgtgctcgtc tcggcgcatc ggcgtgccga tgcgggacgg agcgcggcga ctctgacgag
     1681 acgcgggctt accgttcagt tgaggaggcg tgcgtgcggg ccgtcggatg cgacatcgcg
     1741 atccaggcgc gcggcgcggg aagagtcgtc gtcggctcgt tttcccgcgg gcgccgacaa
     1801 tacgtgtgtt taccgcgggt gcgcaagagc caggtgttta cggtccaggt cggtggcctc
     1861 acacgactta ccgatcgttg atatgtgaaa tgtcggacct gaccagctgt ccccggcacc
     1921 cggctgcgag gaacgcagac ttcgcggatt gcgcagattg cacagccgtc tggagcgtgc
     1981 ggaaatccgc gaaatctgcg gaatccgcgt tctcctcacg gcctcgtgca ggaggtgctc
     2041 ggcttacctt ttccattcct acctccgcca caatggccat gcgcctcgac cgtctcctcc
     2101 ctccgctcgc tctcctcgcc gccctcacgg cgatgcatcc gtccgcggcc gccgcgcaga
     2161 acgccgcgct gtaccgcgcc gccaccgacc gcctcatcga cgcggcgacg aaggacagcg
     2221 cggcgtggaa ccgcatcgcc gagctgaccg ataccttcgg ccaccggttg agcggctcgg
     2281 aagcgctgga gcgcgccatc gactggacgc tcgcccgcat gcggtcggat ggactcgaga
     2341 acgtgcgcgg cgagccggtg atggtgccgc actgggtgcg cggcgaggaa tcggcggagc
     2401 tggtggcgcc gcgtcgcaag gccatgacga tgctcgggct cggcggcagc gtcggcaccc
     2461 ccgccggcgg cctcaccgcg ccggtgctcg tcgtcacgag cttcgacgat ctccagaagc
     2521 gcgccgccga cgcgcgcgga aagatcgtgc tgttcgacgt gcccttcacg acgtacggac
     2581 agacggtcgc ctaccgaggc gcgggtgcgg cggccgcctc gcgcgccgga gcggtggcca
     2641 tgctgctgcg ctccgtggct tcgttctcga tgaactcgcc gcacacgggc tccatgcgtc
     2701 gcgacaccac cgcgacgccg atccctgccg cggcgatcac ggtggaggac gccatgctcc
     2761 tccaccgcct gcaggatcgc ggtgtgacgc cgagcgtcca cctgacgatg aatgcgcgca
     2821 cgctgcccga tgcgccgtcg cgcaacgtgg tggccgagct ccgcggccgc gagctgcccg
     2881 acgaggtcgt ggtgctcgga gggcacatcg actcgtggga cgtggggcag ggcgcgatgg
     2941 acgacgccgg cggcgtcgtg gccgcctggg aggcggtgcg cctcatgaag cagctcggcc
     3001 tgcgcccgcg tcgcaccgtg cgcgtggtgg gctggacgaa cgaggagaac ggcacgcggg
     3061 gcggcatcgg ctatcgcaac g
//
LOCUS       DASSYW010000752         4346 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_3044, whole genome shotgun sequence.
ACCESSION   DASSYW010000752 DASSYW010000000
VERSION     DASSYW010000752.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4346)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4346)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4346
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3044"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..368
                     /locus_tag="VFN38_12000"
     CDS             <1..368
                     /locus_tag="VFN38_12000"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HET9012533.1"
                     /translation="GVDAETLWRWQADVEGAVHVPLDRSATDRDGAAVSPAEFLGNGE
                     ELSDDRITREEEVALLREALLSLKDQERTVLSLYYFEELKAREIAEVMGVSESRISQI
                     RSKALGQLREALAPLQATA"
     gene            complement(369..998)
                     /locus_tag="VFN38_12005"
     CDS             complement(369..998)
                     /locus_tag="VFN38_12005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012534.1"
                     /translation="MAATLAVPGAGDWLLLSDELLAGLVHALNNRVTALSVCAELAAL
                     GDDQMLGEGILMEEVGRLQRAAALIGLLPARGHPEALEIAPVLADAIAIHVHHPTLRA
                     IACTVDMQTGMQPVRVPRWALLRLLLIVVDAAKGAVQNGSNAAAAVQLTSDDSTVHVR
                     AVARDGEGSYATEMAALCGGALVREGDTLVLSLPSLNEVRRRERTGRVG"
     gene            1339..2013
                     /locus_tag="VFN38_12010"
     CDS             1339..2013
                     /locus_tag="VFN38_12010"
                     /inference="COORDINATES: protein motif:HMM:NF013843.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxynucleoside kinase"
                     /protein_id="HET9012535.1"
                     /translation="MLIGIAGMVGSGKSTLTRALATRFGLQLALESVDDENPWLERFY
                     GGGIEAMRAYALHLQLHFLATRFESMRRIRGAGGSWVLDRTWYEDAEIFARGHFEEGL
                     MSALEWELYRRLYVELLYSPAARPPRLLVYLHAPLDTIVARIRLRGRPKEKDTPESYW
                     AALHARYERWIAGFRACPVLSLDVRDYDLVGDPLAIEPIAARVRARVEPVLPQTDLFP
                     TALVER"
     gene            2104..3003
                     /locus_tag="VFN38_12015"
     CDS             2104..3003
                     /locus_tag="VFN38_12015"
                     /inference="COORDINATES: protein motif:HMM:NF017269.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine zipper 2TM domain-containing protein"
                     /protein_id="HET9012536.1"
                     /translation="MPAPQRSLRLALTLASFLTLTAGCRDRTPPAADSSLAQDIAMAQ
                     RPGPGPEVFNDAPIGGTAPAAPTAARPTPRPEPPRTTSPRPRPAPRRATPPVTVAQSP
                     REPAPRAEEPAPAPAQAPAPAAGVIGAGSRIGMTINGRVCTNTALAGDKFTATVTSAT
                     MGSNGAMIPAGATVVLEVASVERADPVENSRVEFRVRAVDVNGSARQVDGDVETLGSL
                     EKAQTSGGNERTKVIGGAVAGAVLGQIFGRSTKSTVIGAAAGAAAGTAAAHASRTTYA
                     CLPEGSALRLTLSRDLVLRRGDI"
     gene            3307..>4346
                     /locus_tag="VFN38_12020"
     CDS             3307..>4346
                     /locus_tag="VFN38_12020"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HET9012537.1"
                     /translation="MKSRTPPAAPATPPPVDPVAEREMRDAEERALAESGLGSGLLAR
                     QPILLTGERPAVHKVCPQCGNEYETSARFCPSDGTSLRPKGSDSLIGRVMAERYHILK
                     RIGEGGMGRVYLGEHVKMNRQCAIKVMSPALVNDHESAARFAREASNAARIIHPNVAA
                     VFDYGESEGLVYLVMEYVEGEPLARILAREAPLSVERALDLARQIADGLGAAHELGIV
                     HRDLKPDNILVSRNKAGKEVAKVVDFGIAKAIQENAGDALTRTGLVIGTPEFMSPEQL
                     LGDPIDARSDLYALGCIMHLMLTASPPFAAPTREQMIKRRLSEEAPHIQALDPGLPDS
                     LDRIVNRLLARSP"
BASE COUNT          676 a         1572 c         1477 g          621 t
ORIGIN      
        1 tgggtgtgga cgcggaaacg ctctggcgct ggcaggccga cgtcgaggga gccgttcacg
       61 tgccgctcga ccgcagcgcg acggaccgcg acggcgcggc cgtgtcgccg gcggaattcc
      121 tcggcaacgg agaggagctg agcgacgacc ggatcacgcg ggaggaagag gtcgcgctcc
      181 tccgcgaagc gctgctctcc ctcaaggatc aggagcgtac ggtgctctcg ctctactact
      241 tcgaggagct caaggcgcgc gagatcgccg aggtcatggg cgtgagcgag tcgcgcatct
      301 cccagatccg gtcgaaggcg ctcggccagc tccgtgaagc gctcgcaccg ttgcaggcga
      361 cggcctgatc agccgacgcg ccccgtgcgt tcgcggcggc gcacttcgtt gagcgagggc
      421 agcgacagca cgagcgtatc gccctcgcgc accagcgcgc cgccgcacag cgcggccatc
      481 tcggtcgcat agcttccctc gccgtcccga gccaccgcgc ggacgtgcac ggtgctgtcg
      541 tcgctcgtga gctggaccgc tgccgccgcg ttggagccgt tctgcacggc gcccttcgcg
      601 gcatccacca cgatgagcag gagtcggagc agcgcccatc gcgggacccg caccggctgc
      661 atgcccgtct gcatgtcgac ggtgcacgcg atggcccgca gcgtgggatg atgcacgtgg
      721 atggcgatcg cgtcggcgag cacgggagca atctcgagcg cctccggatg cccgcgcgcc
      781 ggcagcagcc cgatgagcgc cgcggcacgc tgcaaacgcc cgacttcctc catcaggatg
      841 ccctcgccga gcatctggtc gtcgccgagc gccgcgagct cggcacacac gctgagcgcg
      901 gtgacgcgat tgttgagcgc gtgcacgagg cccgccagca gctcgtcgga caggagcagc
      961 cagtcgcccg cgccgggcac ggccagcgtg gccgccatct ccggtatcgc gcgctcacct
     1021 ctcatgcgtc gcgccgcggc aatgcgcact gcgccggttt cgcaggcgac cggatgtcac
     1081 gtgcatgatc aggagccgtg aaggtgagag ctctgcatcg agccccatcg agccatgggc
     1141 tgcacattgc gcctcgcgct agcgtgggcg gcgcgccgaa tcgacgacac cgcggacacc
     1201 gcagagagta cgccacggga agcgacaacg aagcatattc gttcctgcgc gcatcgcaca
     1261 cgggtgcgat cccgcgacag tggacctgtc accgcgccca cctgcattca accgcgtcct
     1321 cgggttagaa tcgctctaat gttgatcggc atcgccggca tggtcggcag tggaaagagc
     1381 acgctcacgc gcgcgctcgc gacgcggttc ggcctccagc tcgcgctcga gagcgtggac
     1441 gacgagaacc cgtggctcga gcggttctat ggcggcggca tcgaggcgat gcgcgcgtac
     1501 gcgctgcacc tccaactcca tttcctcgcc acgcgcttcg agagcatgcg ccgcatccgc
     1561 ggcgccggcg ggagctgggt gctcgaccgc acctggtacg aggacgccga gatcttcgcg
     1621 cgcggccact tcgaggaagg attgatgtcg gccctcgagt gggagctcta tcggcggctg
     1681 tacgtggagc tgctgtactc gcccgcggca cgaccgccca ggctgctcgt gtatctccac
     1741 gcaccgctcg acacgatcgt cgctcgcatc cgcctgcgtg gacgccccaa ggaaaaggac
     1801 acgcccgagt cgtactgggc ggcgctgcac gcacgatacg agcgatggat cgccggcttt
     1861 cgcgcctgcc ccgtgctcag cctcgacgtg cgcgactacg atctcgtcgg cgatccgctc
     1921 gccatcgagc cgatcgcggc tcgggtgagg gcgcgcgtgg agccggtgct gccgcagacc
     1981 gacctgttcc cgacggcgct cgtcgagcgc tgacggcgcc agcgcgaacc tgaggggggc
     2041 ggcggggtag cgaagacagc gtatctcgcc ttcctccctc gccgcgaccc tgtcgccgct
     2101 gccatgcccg caccccagcg ctctctccgg ctcgcgctca cgctcgccag cttcctgacg
     2161 ctcacggcag ggtgccggga tcgcaccccc ccggcggccg actcctcgct tgcgcaggac
     2221 atcgccatgg cgcagcgccc cggccccggt cccgaggtgt tcaacgacgc cccgatcggt
     2281 ggaaccgctc cggccgcgcc gaccgccgct cgccccacgc ctcggccgga gcccccgcgg
     2341 accacttccc cccgcccgcg ccccgcgccc aggcgcgcga cgccgcccgt gaccgtcgcc
     2401 cagtcgcccc gcgagcccgc tccgcgtgcc gaggaaccgg caccggcccc tgcgcaggcg
     2461 ccagcaccgg cggcgggggt gatcggcgcc ggttcgcgca tcggcatgac gatcaacggt
     2521 cgcgtctgca cgaacacggc tctcgccggc gacaagttca cggccacggt caccagcgca
     2581 acgatgggct ccaatggagc gatgatcccc gccggcgcaa ccgtggtgct ggaagtggcc
     2641 tcggtggagc gcgccgatcc ggtggagaac agtcgcgtcg agttccgcgt gcgtgccgtg
     2701 gatgtgaacg gctcggcgcg gcaggtcgac ggcgacgtgg agacccttgg gtcgctcgag
     2761 aaagcgcaga cgtctggcgg caacgagcgg acgaaggtga tcggcggcgc ggtcgcgggc
     2821 gcggtcctgg gccagatctt cggccggagc accaagtcca ccgtgatcgg ggcagcagcg
     2881 ggggcggcgg cgggcacggc ggccgcgcac gcctcgcgga cgacgtatgc ctgccttccc
     2941 gaggggagcg ccctgcggct caccctgtcg cgagacctgg tcctccgccg cggtgacatc
     3001 tagcggcgaa tgtgacgtag atcacattta cccgctccgg cacatcaaac gatgccgccg
     3061 atgggtcgtc cttctggtgc aggagtgcga cgctggtgcc gaccctccat gaaggcaacg
     3121 gcgcccggaa ccgtgatttt caggggggca ccaaactggc actctccttt catcgctccg
     3181 cgccgatccc cggatcgacc ggcgaatcag ctgtcgcgct ccgtgcaccg gtgaacgccg
     3241 gactttcgta gttccccatc ccctgcgtac tctacggcga tgtccgccga tacacccgat
     3301 gacgccgtga agtcacgcac ccccccagcc gcgcccgcca cgccgccgcc ggtcgatccg
     3361 gtggccgagc gggagatgcg cgacgcagag gagcgcgcgc tggcggagag cggcctcggg
     3421 tcaggcctgc tcgcccggca acccatcctg ctcaccggcg agcggccggc ggtgcacaag
     3481 gtgtgtccgc agtgcggcaa cgagtacgag acgtcggcgc gattctgtcc gtcagacggc
     3541 acgtcgctgc gccccaaggg ctccgattcg ctgatcggcc gcgtgatggc ggagcgctac
     3601 cacatcctca agcgcatcgg cgaaggcggg atggggcgcg tctatctcgg cgagcacgtg
     3661 aagatgaatc gccagtgcgc catcaaggtg atgagtcccg ccctggtcaa cgaccacgag
     3721 tccgcggcgc ggttcgcccg cgaggcgtcg aatgcggccc gcatcatcca tcccaatgtc
     3781 gccgccgtct tcgactacgg agagagcgaa gggctggtct acctcgtgat ggagtacgtg
     3841 gagggcgagc cgctggcgcg cattctcgcg cgcgaagcac cgctctcggt ggagcgcgcg
     3901 ctcgacctcg cgcgacagat cgcggacggg ctgggcgccg cccacgagct tggcatcgtg
     3961 caccgcgacc tgaagccgga caacatcctc gtctcgcgca acaaggcggg caaggaggtc
     4021 gccaaggtcg tggacttcgg catcgccaag gcgatccagg agaacgccgg cgatgcgctc
     4081 acgcgcaccg gtctcgtgat cggcacgccg gagttcatga gccccgagca gctgctcggc
     4141 gatcccatcg acgcccgcag cgacctgtac gccctcggct gcatcatgca tctcatgctc
     4201 accgcgtcac cgccgttcgc ggcgccgacg cgggagcaga tgatcaaacg ccggctcagc
     4261 gaggaggcgc cgcacatcca ggcgctcgac ccgggactgc ccgattccct cgaccgcatc
     4321 gtgaatcggc tgctcgcgcg cagccc
//
LOCUS       DASSYW010000753         2135 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1187700, whole genome shotgun sequence.
ACCESSION   DASSYW010000753 DASSYW010000000
VERSION     DASSYW010000753.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2135)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2135)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2135
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1187700"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1181
                     /locus_tag="VFN38_12025"
     CDS             <1..1181
                     /locus_tag="VFN38_12025"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HET9012538.1"
                     /translation="GGTSVLVEGEHVREVSTKPIKAAKAAVIDCKGRTLMPGLIDCHV
                     HTMLSEVNIRYLEAIPLTMMTVRAASLARAMIDRGFTTVRDTGGADWGLRDGIAQGLL
                     PGPRMFIAGRALGPTGGHSDARRRTDVHKHACHCCNAMLFCLEIVDGADAVRAAAREQ
                     LRQGADQIKIMVSGGVASPYDPLDSKQLTLEEISAAVEEAHAFGRYAQAHAYTPEAIT
                     RAVSQGVRTIEHGNLIDDKSARLMKQKGAYLVANLVAYYAMKERAKEFGMTAEMLAKN
                     ELVIDGGLRSLEICKRHGIKVGYGSDLLGQLQVDQSREFLLRREVLSPIEIIRQATLV
                     GAEIVRMPDKLGVLKPGAFADLLVVDGDPLRKLELLTGQGEHLSVIMKAGRFHKNRLA
                     "
     gene            1194..2060
                     /locus_tag="VFN38_12030"
     CDS             1194..2060
                     /locus_tag="VFN38_12030"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HET9012539.1"
                     /translation="MAHGALQAPLPLGARRAAMLDSRVVGRAALLAAAALGYAVILTP
                     LLFVCGLSFFSNEIVTFPPQGYTLRWFAHIFDQNNFVSGFTTSLQIGIAAMLGGLVLG
                     VPASLVLARRNFRGRETLNTLLVLPLVVPGIVAGTAIYVFQIEVEIATGLPLLGSRAG
                     LVLAHIMITIPWTVRLLTASLHGFDRSIEEAALNLGATPLQAFFKVTLPVIKPGIVAA
                     ALFSFIISFGNLEMTLFLVAPGQTTLPIAILQYLQWRIDPTIAAVSLLQILLIGTGML
                     ITDRYVKLTRVL"
BASE COUNT          335 a          743 c          714 g          343 t
ORIGIN      
        1 cgggcgggac gtcggtcctg gtggaaggcg agcacgtccg cgaggtctcg acgaagccga
       61 tcaaggcggc gaaggccgcg gtcatcgact gcaagggccg cacgttgatg ccgggcctca
      121 tcgattgcca tgttcacacc atgctgtcag aggtgaacat ccggtatctc gaggccatcc
      181 cgctgacgat gatgacggtg cgcgcggcga gcctcgcgcg ggcgatgatc gatcgcggct
      241 tcacgacggt gcgcgacacc ggcggcgcgg actggggcct gcgcgacggc atcgcccaag
      301 gcctgctgcc gggcccgcgg atgttcattg cgggacgcgc gctcgggccg accggcgggc
      361 actccgacgc gcgccggcgc acggatgtcc acaagcacgc ctgccactgc tgcaacgcga
      421 tgctcttctg tctcgagatc gtcgacggcg ccgacgccgt ccgcgccgcg gcgcgcgagc
      481 agctccgcca gggcgccgac cagatcaaga tcatggtctc gggcggcgtg gcgagccctt
      541 acgatcctct cgacagcaag cagctcacgc tcgaggagat cagcgccgcc gtcgaggagg
      601 cgcacgcgtt cggccgctac gcccaggcgc acgcgtacac gcccgaagcg atcacgcgcg
      661 cggtgagcca gggcgtgcgc acgatcgagc acggcaacct gatcgacgac aagtcggcgc
      721 gcctgatgaa gcagaagggg gcctacctcg tcgcgaacct cgtcgcctac tacgcgatga
      781 aggagcgcgc gaaggagttc gggatgacgg cggagatgct cgcgaagaac gagctcgtga
      841 tcgacggcgg gcttcggtcg ctcgagatct gcaagcggca cgggatcaag gtcggctacg
      901 gcagcgacct cctgggccag ctgcaggtcg accagagccg cgagttcctg ttgcgccgcg
      961 aggtgctctc gccgatcgag atcatccggc aggcgacgct cgtcggcgcc gagatcgtcc
     1021 gcatgcccga caagctcggc gtcctcaagc ccggggcgtt cgccgacctc ctcgtcgtcg
     1081 acggcgatcc gctccggaag ctcgagctcc tgaccggtca gggcgagcac ctgtccgtga
     1141 tcatgaaggc cggtcgcttc cacaagaacc gcctcgccta gggagcctcc cggatggcgc
     1201 acggcgcgct gcaggccccg ctgccgctcg gcgcgcggcg cgcggcaatg ctcgattcgc
     1261 gcgtcgtcgg ccgcgcggcg ctgctcgccg ccgccgcgct cggctatgcc gtcatcctga
     1321 cgccgctcct gttcgtctgc gggttgagct tcttcagcaa cgaaatcgtg accttcccgc
     1381 cgcagggcta cacgctgcgc tggttcgcgc acatcttcga tcagaacaac ttcgtcagcg
     1441 ggttcacgac gagcctgcag atcggcatcg cggcgatgct cggcgggctc gtgctcggcg
     1501 tcccggcgag cctcgtgctc gcgcgccgga acttccgggg ccgcgagacg ctgaacacgt
     1561 tgctcgtgct tccgctcgtg gtgcccggca tcgtcgccgg aacggcgatc tacgtattcc
     1621 agatcgaagt cgagatcgcg accggactgc cgctcctcgg ctcgcgcgcc gggctcgtgc
     1681 tcgcgcacat catgatcacg attccctgga ccgtgcgcct cctgacggcg agccttcacg
     1741 ggttcgaccg ctcgatcgag gaagcggcgc tgaatctcgg cgccacgccg ctgcaggcct
     1801 tcttcaaggt gacgctgccg gtcatcaagc cgggtatcgt cgccgccgcc ctcttctcgt
     1861 tcatcatctc gttcggcaac ctggaaatga cgctgttcct ggtggcgccg gggcagacga
     1921 cgcttccgat cgcgatcctg caatacctgc agtggcggat cgacccgacg atcgccgccg
     1981 tgtcgctgct gcagatcctg ctgatcggca ccgggatgct catcaccgac cgctacgtca
     2041 agctgactcg agtgctctaa agcgaaactg cgatggggcg tctcgagctc agcggcctca
     2101 ccaagaccta cggcgacgtc cgcgcggtcg gcgat
//
LOCUS       DASSYW010000754         2208 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_702959, whole genome shotgun sequence.
ACCESSION   DASSYW010000754 DASSYW010000000
VERSION     DASSYW010000754.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2208)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2208)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2208
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_702959"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..274
                     /locus_tag="VFN38_12035"
     CDS             <1..274
                     /locus_tag="VFN38_12035"
                     /inference="COORDINATES: protein motif:HMM:NF014344.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="arginine deiminase family protein"
                     /protein_id="HET9012540.1"
                     /translation="YSRLLPVPFHEQLLARGLTLVDTPDGEFDSMGTNVLALAPRQCV
                     MLEGNPRTRAALEGAGAEVVEYAGTEISVKGAGGPTCLTRPLVRAR"
     gene            284..1591
                     /locus_tag="VFN38_12040"
     CDS             284..1591
                     /locus_tag="VFN38_12040"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HET9012541.1"
                     /translation="MPLLRILGVWFGVAIVIGGTIGAGILRTPSLVMSHVGSPGLAIA
                     VWIAAGLFAMAAAASLAELAAAIPKSGGFYVFAQRALGDRFGFVAGSADWFANSAAVA
                     FVAVAAAEYLGVLWPALATHQTLVASAAIAVVASSQLVGQRASGRVQEAMSLIKTLAF
                     ATLVVAFFAADAPAVAAAPPRAGLQVQVVDLVSVALALQFAIGAYDGWQSGSYFAGED
                     VDPGRNLPRAFIGGTAIVMGVYVLLNLAVQHVLPADRIAASTLPIAEAASLVMGPRGA
                     TVVTLIAIWSPLTIMSATLLCLTRILYAMGSDGLLPTALGRVDKRGTPTIGLLCSTAA
                     ALALVQLGSFESVATVASVFMFTGYLSALVSLLVLRHREPGLPRPFRVWGAPWTVLVV
                     IAGYLAIFAGIVAGAPRDAAIGIGVLVAGYAVYRVRTYVAAGL"
     gene            1610..>2208
                     /locus_tag="VFN38_12045"
     CDS             1610..>2208
                     /locus_tag="VFN38_12045"
                     /inference="COORDINATES: protein motif:HMM:NF014757.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase family protein"
                     /protein_id="HET9012542.1"
                     /translation="MIIRSVAVLGAGVMGSQIAAHFANAGVPALLLDVTADAAAQGLK
                     RARGLKPDPFFLPDGWKLVTTASFDDGLPRLGDADWIIECVVEQLDAKRALLERVDTA
                     RRAGSVVSSNTSGIPIGVLAEGRSADFRRHWLGTHFFNPPRYLRLLELIPTPETDTAV
                     LDGVATFADLHLGKGVVIAKDSPNFIGNHLALYDVVRALA"
BASE COUNT          268 a          803 c          757 g          380 t
ORIGIN      
        1 atactcccgg ctcctccccg tgcccttcca cgaacagctt ctcgcgcgcg gtctcacgct
       61 ggtcgacacg cccgacggcg agttcgactc gatgggcacg aacgtgctgg cgctcgcgcc
      121 gcggcagtgc gtgatgctcg aaggcaaccc gcgcacgcgc gccgcgctcg aaggcgccgg
      181 agccgaggtg gtcgagtacg ccgggactga gatcagcgta aagggcgccg gcggccccac
      241 ctgcctcact cgtccgctgg tgcgcgcgcg ctgacgcgcc cgaatgccgc ttcttcgcat
      301 cctcggcgtg tggttcggtg tcgccatcgt catcggcggc accatcggcg ccggcatcct
      361 gcgaacgccg agcctggtga tgtcgcacgt gggatcgcca gggctcgcca tcgccgtctg
      421 gatcgccgcg ggtctcttcg cgatggccgc ggcggcgagc ctggccgagc tcgcggcggc
      481 gatcccgaag tcgggcggct tctacgtgtt cgcgcagcgc gcgctgggcg accgcttcgg
      541 tttcgtggcg ggatcggccg actggttcgc caactccgcg gcggtcgcgt tcgtggccgt
      601 ggccgcggcc gaatatctgg gcgttctgtg gcccgcgctc gccacccacc agaccctcgt
      661 cgcgtccgcc gcgatcgccg tggtcgcgtc gtcgcagctc gttggccagc gggcgagcgg
      721 ccgggtgcag gaggcgatga gcctgatcaa gacgctcgcc tttgcgacgc tggtcgtggc
      781 cttcttcgca gccgacgcgc cagccgtcgc cgccgcgccg ccacgagccg ggctccaggt
      841 ccaggtcgtc gatctcgtct cggtcgcgct ggccttgcag ttcgcgatcg gtgcctacga
      901 cggctggcag agcggcagct acttcgcggg agaagacgtc gaccccggcc gcaacctgcc
      961 gcgcgccttc atcggtggaa cagccatcgt gatgggggtc tacgtgctgc tcaaccttgc
     1021 cgtccagcac gtactgcccg ccgaccggat cgccgcgtcg acgctgccga tcgccgaggc
     1081 ggcatcgctg gtcatgggcc cgcgcggggc gacagtggtc accctcatcg cgatctggtc
     1141 gccgctcacg atcatgagcg ccacgctgct gtgtctcacg cgcatcctct acgcgatggg
     1201 tagcgacggt ttgctgccca ccgcgctggg ccgcgtggac aagcgcggca cgccgaccat
     1261 cgggctcctg tgctcgaccg ccgccgccct tgcgctcgtc cagctcggca gcttcgaatc
     1321 ggtagctacc gtggcgtcgg tcttcatgtt caccggctac ctgagcgcgc tggtgtcgtt
     1381 gctcgtcctg cggcaccgcg agcccggcct gccgcgaccg ttccgggtgt ggggcgcgcc
     1441 ctggacggtc ctggtggtca tcgccggcta cctcgcgatc ttcgccggga tcgtcgcggg
     1501 cgccccgcgc gacgcggcca tcgggatcgg cgtgctggtc gcgggctatg ctgtgtaccg
     1561 cgtgcgaacg tatgtagctg caggcctcta ggcctgcctt cgctcaccga tgatcattcg
     1621 ttccgtagcc gtgctgggcg ccggcgtcat gggctcccag attgccgcgc acttcgccaa
     1681 cgccggcgtg ccggcgctcc tcctcgacgt gacggccgac gccgccgcgc aggggttgaa
     1741 gcgcgcgcgc gggctgaagc ccgacccctt cttcctgcct gacggctgga agctcgtgac
     1801 caccgcgtcg ttcgacgacg gcctgccgcg gctcggcgac gcggattgga tcatcgagtg
     1861 cgtcgtcgag cagctcgacg ccaagcgtgc gctcctcgaa cgggtggaca cggcgcggcg
     1921 ggccggcagc gtcgtcagct ccaacacgtc gggcattccg atcggcgtgc tggccgaagg
     1981 ccgcagcgcc gacttccgcc gccactggct gggcacgcac ttcttcaatc cgccgcgcta
     2041 tctgcggctg ctcgaactga tccccacgcc cgagaccgac acggcggtgc tcgacggcgt
     2101 cgcgacgttt gccgatctcc atctcggcaa gggcgtggtg atcgcgaagg actcgccgaa
     2161 cttcatcggc aaccacctcg cgctgtacga cgtggtgcgc gcgctggc
//
LOCUS       DASSYW010000755         2331 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_740016, whole genome shotgun sequence.
ACCESSION   DASSYW010000755 DASSYW010000000
VERSION     DASSYW010000755.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2331)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2331)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2331
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_740016"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..538)
                     /locus_tag="VFN38_12050"
     CDS             complement(<1..538)
                     /locus_tag="VFN38_12050"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HET9012543.1"
                     /translation="MTELAPPPADAPVILVADDVPANVELLFDQLHVLGFRAIAASDG
                     PSAVAACFEQMPDLCILDVSMPAGDLGVDDRSTGFEVCRRIKRDPRTARIPVIFVTAL
                     NDTTDRVKAIEAGGDDFLTKPHNRLVLGARVRSLLKLKAATDALEESLRKQKELEKVR
                     DDLMKMIVHDLKTPLTSII"
     gene            complement(543..1712)
                     /locus_tag="VFN38_12055"
     CDS             complement(543..1712)
                     /locus_tag="VFN38_12055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012544.1"
                     /translation="MRSLPLRLAAAALLVLPAAAGAQGTLSTQGFGYPTGQMSTRTLG
                     TGGALAEIDPLSAINPASIINLGASVLYFQAEPEYRTIRVGGASDRSTVARYPLMAAG
                     VPLRSDLYAGLSVSNLLDRSFETVARGSQVVGGNTITSTNTFKSDGAVGDLRLALSWA
                     PRSWLHLGLAGHAISGDNRLTSTQRFDDTTRYTGIVDTSTVTYVGNAFSGGVELYTGR
                     YGVVAASYRRGGPLSLKHGDTTLSIARVPDRLALSAAYLGIRGTSIAVRTAREQWTDL
                     RGLGSAGLPISDKWDTSVGADVLGPRFAGRAVQLRAGARWRTLPFGVRPILAGGGFGA
                     SADVTEKSYSLGAGTLLARGRAALDVAGIRASRRSSATSVQEDAWTLSIGVTVRP"
     gene            complement(1715..>2331)
                     /locus_tag="VFN38_12060"
     CDS             complement(1715..>2331)
                     /locus_tag="VFN38_12060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012545.1"
                     /translation="SADTVVRPDTVFLTSTTPANDVPISSSLLMYPLHAAGALPAPTD
                     DRLAVGGIGGARSYLRFDIPPIVLDSVQVIRATLELTQRPSRFAGGSGDTLTLLTHAV
                     TAGPAVTDIYTASQFLGSRAFFPVDTLRLIPRESGVKSLEIVHVVRAWRTVGTTRTPR
                     ALVLRAAEEGLLAGEVNFFSIEAPADVRPRLRLTYVPRRGFGLP"
BASE COUNT          345 a          777 c          901 g          308 t
ORIGIN      
        1 cgatgatgga ggtgagcggc gtcttgagat cgtgcacgat catcttcatc agatcgtcgc
       61 ggaccttctc gagttccttc tgcttccgca ggctctcctc gagcgcatcg gtggccgcct
      121 tgagcttgag cagcgagcgc acccgcgcgc cgaggacgag gcggttgtgc ggcttggtga
      181 ggaagtcgtc gccccccgcc tcgatcgcct tcacccggtc cgtcgtgtcg ttcagcgcgg
      241 tgacgaagat gaccgggatg cgcgccgtgc gcggatcgcg cttgatccgc cggcacacct
      301 cgaagccggt ggagcggtcg tccacgccga ggtcgccggc cggcatcgag acgtcgagga
      361 tgcacaggtc cggcatctgc tcgaagcagg cggccaccgc cgacggcccg tccgacgccg
      421 cgatggcgcg gaagccgagc acgtgcagct gatcgaacag cagctcgacg ttcgccggca
      481 cgtcatccgc gacgaggatg acgggcgcgt cggccggcgg gggcgcgagc tcggtcatcg
      541 gctcaagggc gcacggtgac gccgatgctc agcgtccagg cgtcttcctg gaccgaggtg
      601 gccgacgaac ggcgcgaggc ccggatgccc gcgacgtcga gcgcggcgcg cccgcgggcg
      661 agcagcgtgc cggcgccgag cgagtagctc ttctcggtga cgtcggcgga agcgccgaag
      721 ccgccgccgg cgaggatcgg ccgtaccccg aacgggaggg tgcgccaccg cgcgccggca
      781 cgcagctgca cggcacggcc ggcgaagcgc gggccgagca cgtcggcgcc cacgctcgtg
      841 tcccacttgt ccgagatcgg caggccggcc gagccgagcc cgcgcaggtc ggtccactgt
      901 tccctggcgg tgcgcacggc gatggacgtg ccgcggatgc caaggtacgc cgcgctcagc
      961 gcgagacggt cgggcacccg tgcgatgctg agcgtggtgt ccccatgctt cagcgagagc
     1021 ggtccgccgc ggcgatacga ggccgcgacc acgccgtacc gcccggtgta cagctcgacg
     1081 ccgcccgaga aggcgttccc cacgtaggtc acggtggagg tgtccacgat gcccgtgtag
     1141 cgggtggtgt cgtcgaagcg ctgggtgctg gtgaggcggt tgtcgccgct gatcgcgtgg
     1201 ccggccagcc cgaggtgcag ccagctccgc ggcgcccacg agagggcgag ccgcaggtcg
     1261 cccacggcgc cgtcgctctt gaaggtgttc gtcgacgtga tggtgttgcc gccgacgacc
     1321 tgcgagccgc gcgccaccgt ctcgaaggag cggtcgagca ggttggagac gctcagcccc
     1381 gcgtagaggt cggaccggag gggaacgccg gccgccatca ggggatagcg cgccacggtg
     1441 gagcggtcgg acgcgccgcc gacgcggatg gtccggtatt ccggctccgc ctggaagtag
     1501 agcaccgagg cgccgaggtt gatgatcgac gcggggttga tggccgaaag cggatcgatc
     1561 tcggccagcg cgccccccgt gccgagggtg cgggtgctca tctggcccgt ggggtagccg
     1621 aagccctgcg tgctgagcgt gccctgcgca ccggcggccg cgggaagcac gagcagggcc
     1681 gcggcggcaa ggcgaagcgg aagggatcgc atgatcacgg gagtccgaag ccgcgacgcg
     1741 gcacgtaggt gaggcggagc cgggggcgca cgtcggccgg cgcctcgatg gagaagaagt
     1801 tcacctcacc ggcgagcagc ccctcctccg cggcgcggag gacgagcgcg cgcggcgtgc
     1861 gcgtcgtgcc gacggtgcgc caggcgcgca cgacgtggac gatctccagc gacttcacgc
     1921 cgctttcgcg cgggatcagc cggagcgtgt ccacgggaaa gaacgcccgc gagccgagga
     1981 actgcgacgc ggtatagatg tcggtgacgg ccgggcccgc ggtgaccgcg tgcgtgagca
     2041 gggtgagcgt gtccccgctt ccgccggcga accgcgacgg ccgctgcgtg agctcgagcg
     2101 tcgcgcggat cacctgcacc gagtcgagca cgatgggcgg gatgtcgaac cgcagatagc
     2161 tccgcgcgcc gccgatgccg ccgacggcga ggcggtcgtc ggtcggcgcc ggcagcgcac
     2221 cggcggcgtg cagcggatac atcagcaggc tgctggagat cggcacgtcg ttggccggcg
     2281 tggtggacgt caggaagacc gtgtctggcc tcacgaccgt gtcggcggag a
//
LOCUS       DASSYW010000756         2259 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1707844, whole genome shotgun sequence.
ACCESSION   DASSYW010000756 DASSYW010000000
VERSION     DASSYW010000756.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2259)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2259)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2259
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1707844"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..322)
                     /locus_tag="VFN38_12065"
     CDS             complement(<1..322)
                     /locus_tag="VFN38_12065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012546.1"
                     /translation="MKTRNSALYALGLAAAITLGGVVTADAQVRRTTPQRRMPVRKDV
                     PAPVKADTVIVTRVDTVTVRRVDTLTGPTVMRYDTVTRMVYPPLQRLPGLFFGLGAGS
                     TIPMN"
     gene            1210..>2259
                     /locus_tag="VFN38_12070"
     CDS             1210..>2259
                     /locus_tag="VFN38_12070"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HET9012547.1"
                     /translation="MRQLFRSTLVHLTLLAGLPAAAAAQDAATITGRVTGEGGTPLAA
                     VTVAITELGVGAQSRDDGRYTLVVPGARVARQTVALTARRVGYKPRTVRLTLVPGATT
                     QDFALETNPLQLGEVVITGAGTATEVEKLGSVRNAVAADLIVRANEANVVQALAAKAP
                     GVDVTSSSGDPGASSTIKIRGLRTINGSAEPLFVIDGLPVDNSSQSTTNLNPIDAGGT
                     GQAGQVNGGEIEGTSQPNRLSDINPDDIESVEILKGAAAGAIYGSRAANGVILITTKK
                     GRAGLTRYSLRSSYSNDEITRKYPLQRSFSQGQNNVLPSSCATNSVSGAVASGSCFRS
                     WGPAFSGETFDHASEA"
BASE COUNT          344 a          828 c          752 g          335 t
ORIGIN      
        1 tgttcatcgg gatcgtggag cctgcaccga gcccgaagaa caggccgggc agccgctgga
       61 gcggcggata caccatgcgg gtcacggtgt cgtaacgcat caccgtgggg cccgtgaggg
      121 tatccacgcg acgcaccgtg acggtgtcga cgcgcgtgac gatcaccgtg tcggccttga
      181 ccggcgccgg cacgtccttc cgcacgggca tgcgccgctg cggcgtcgtg cgtctcacct
      241 gggcatcagc cgtcacgaca ccgccgaggg taatggcggc tgcgaggccg agtgcgtaca
      301 acgctgagtt ccgagtcttc atccttgtcc tccgtcgccg tcgccctgtt gtctggttcc
      361 ccgcgggcga ggttgcgggt gcgacgagag tcgtcgcatt ctaccgggct cggggactgg
      421 cacaccccgt gccgcggaag cagaatatag cgcgaattgg ttcagatact accggccggg
      481 caaaaaaact cccgttggcc gggtgctgca aaccgtcgca ccccctctgc aagaggatcg
      541 ccacggggtc gttcgtggcg agaaaagaag cgggtggact cgaatgcggt gatgctgcac
      601 gcaggctcga acgggcagca tatccctgtc gaaaccccgc gagtcgtcat ctcgtcacgc
      661 acacgcactg acgcgtgcgt gcactgcggc ctcgcgtgcg gcttggcgat gcgtgatcgc
      721 ggcggcgcga ccatcccgtg cgtcgggccc caatgtgcct gttcccggtg gcgggcgcga
      781 gtcccgccgg cgcgcacgcc cccgcgccac gttgccgtcc ttctaataaa cgtttggatg
      841 caccccccgc cggcgccgat gtgatcgggc tcacgctgcg cgccagctgt tctcggcaac
      901 ggttcgcgcc cgcgcacgtc ccgctaccga agctgccttg cgcaaccgcc ctgtgacgcc
      961 gatcacggag gccgggtttc tcgcatacgg gactcgcccc gggcgtgctt gacgcggtcg
     1021 gccagcgtcg tatcgtagcg cccgctctcc catagcatcc ctccgccggc cgcgcgccag
     1081 ctccaccgcg cgcgacgcga ctgcggtcac gctgccctcg ttcctcagcg cgcctttgtg
     1141 cgcgcctgcg acgcagcggc gacgacgccg attcgtggtt cggcctctcc attcacacgc
     1201 ggaggaggta tgcgacagct gttccgcagc actctggtgc atctcaccct gctcgccggc
     1261 ctgcccgccg ccgcggcggc gcaggacgcg gcgacgatca ccggacgcgt caccggcgag
     1321 ggcggcaccc cgctcgccgc cgtcaccgtc gcgatcaccg agctcggggt cggcgcacag
     1381 tcgcgcgacg acggccgcta cacgctcgtc gtgcccggcg cgcgggtggc gcgccagacc
     1441 gtcgccctca cggcgcgacg cgtgggctac aagccgcgca cggtgcgcct gacgctcgta
     1501 cccggcgcca ccacgcagga cttcgccctc gagaccaacc ccctgcagct cggcgaggtc
     1561 gtgatcaccg gggccggcac ggccaccgag gtggagaagc tcggcagtgt gcgcaacgcc
     1621 gtggcggccg acctgatcgt gcgcgccaac gaggccaacg tcgtgcaggc gctcgccgcc
     1681 aaggcgcccg gggtggacgt gacgtcgtcg tcgggcgatc ccggggcctc gtccaccatc
     1741 aagatccgcg gcctgcggac catcaacggc tccgccgagc cgctgttcgt catcgacggc
     1801 ctgccggtgg acaactcgag ccagtccacg acgaacctca accccatcga cgccggcggc
     1861 accggacagg ccggccaggt gaacggcggc gagatcgagg gcacctcgca gccgaaccgc
     1921 ctctccgata tcaatcccga cgacatcgag tcggtcgaga tcctgaaggg cgcggcggcc
     1981 ggcgccatct acgggtcgcg cgccgccaac ggcgtgatcc tcatcaccac caagaagggg
     2041 cgggcaggac tcacccggta ctcgctccgc agctcgtact ccaacgacga gatcacgcgg
     2101 aagtatccgc tgcagcgcag cttctcgcag gggcagaaca acgtgctgcc gtcgtcgtgc
     2161 gccacgaaca gcgtgagcgg cgccgtggcc tccggctcct gcttccgctc gtgggggccc
     2221 gccttcagcg gcgagacctt cgaccacgcg agcgaggcg
//
LOCUS       DASSYW010000757         2766 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_282317, whole genome shotgun sequence.
ACCESSION   DASSYW010000757 DASSYW010000000
VERSION     DASSYW010000757.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2766)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2766)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2766
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_282317"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..511)
                     /locus_tag="VFN38_12075"
     CDS             complement(<1..511)
                     /locus_tag="VFN38_12075"
                     /inference="COORDINATES: protein motif:HMM:NF012879.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HET9012548.1"
                     /translation="MRAEQSLPRRPLPRTALALVALLLSLMSLPLGAQRAELERRIKR
                     DTLPNGLEVIVVENHGVPIATIEVNARNGSFTQSPTYEGLSHLYEHMFFKSNATYPQP
                     EQFVARASELGAVFNGTTQEERVNYYLTVPSDSAIPAMAFLASALRNPLFRADELERE
                     RAVVIGEYDR"
     gene            530..1504
                     /gene="murB"
                     /locus_tag="VFN38_12080"
     CDS             530..1504
                     /gene="murB"
                     /locus_tag="VFN38_12080"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008762 - UDP-N-acetylmuramate
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HET9012549.1"
                     /translation="MAKIPSPSSAPPIDRAALDRVAAALHGPNLRRNVPLAPYTTFRI
                     GGPADLLFEADTADVLADAIVTARQAQVPYFVLGLGANVLIADKGVRGLVIRNVANHT
                     VFHDDGRVRVESGAVMSQLIPEAVRRGWSGLEHYVGIPSTVGGAIWQNLHFLSPAPER
                     ERTMFIAEVFESADLLTEESERKTVDREYMRFGYDDTILHHRRDIALAATFKLEREDP
                     AVMHRIMQENLSWRGSRHPWLDWHPSAGSIFKKIEGVGAGRLVDACGLKGYRIGDAQI
                     SHIHANIMVNLGEATSADVIALVRHAQKMVKENSGYDLEPEINFVGEF"
     gene            complement(1505..2272)
                     /locus_tag="VFN38_12085"
     CDS             complement(1505..2272)
                     /locus_tag="VFN38_12085"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF013827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HET9012550.1"
                     /translation="MTPWVQRFLIANVFVFFVQQTVAGMDRALVFVPALLLSRPWTLV
                     TYMFAHGGFTHILFNMLGLYFFGPRVEQRIGSERFFVLYLLSGITGGLLSFYNPAVPI
                     IGASGAVFGVLLAYARFWPRDQIFIWGVIPVEVRWLVLIYTAISLLGVGSGVAHFAHL
                     GGFLGAFLYLLWLERSAGARKFRKVATAPPPAKDAALGNWRNVNRASVHAVNKDEVDR
                     ILDKISATGIASLTPQERLFLSNFVPPDDRTPPPSQG"
     gene            complement(2294..>2766)
                     /locus_tag="VFN38_12090"
     CDS             complement(2294..>2766)
                     /locus_tag="VFN38_12090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012551.1"
                     /translation="AMLRALANKVWVLHDRHITTFDGTFAEWEVASEERAHAAAVRAA
                     EEVALRRVDEKKRTASKQSRDSSGGDAQRKSLRQARDRAAEAERKVSEIDGEITALTT
                     TLDDPELYTRAGGVEQAHKLGAQLDALRVRLDKALATWERETAALEALERTAVT"
BASE COUNT          445 a          932 c          952 g          437 t
ORIGIN      
        1 tgcggtcgta ctcgccgatc accaccgcgc gctcgcgctc cagctcatcg gcgcggaaca
       61 gcggattccg cagcgccgac gccaggaacg ccatcgccgg aatggcgctg tccgacggta
      121 cggtgaggta gtagttgacc cgctcctcct gggtggtgcc gttgaacacc gcgccgagct
      181 cggaggcgcg ggccacgaac tgctcgggct gcgggtacgt cgcgttcgac ttgaagaaca
      241 tgtgctcgta caggtgcgac agcccctcgt aggtcggcga ctgcgtgaac gagccgttgc
      301 gcgcgttcac ctcgatggtg gcgatcggca cgccgtggtt ctccacgacg atcacctcca
      361 ggccgttggg cagggtgtcg cgcttgatgc ggcgttccag ctcggcccgc tgcgccccga
      421 gcgggagcga catcagggac agcagcagcg cgacaagggc cagcgccgtg cgtggaaggg
      481 gacgacgcgg tagcgattgc tcggctctca tgatttcttt ccctgaccca tggctaagat
      541 tccctctccg tcgtctgcgc ccccgatcga ccgggccgcg ctcgatcgcg tcgcggccgc
      601 gctccacggc cccaacctgc ggcgcaatgt gccgctcgcg ccgtacacca ccttccggat
      661 cggcggaccc gccgacctgc tgttcgaggc cgacaccgcc gatgtactgg cggacgccat
      721 cgtaaccgcc cggcaggcgc aggttcccta cttcgtcctg ggcctgggcg ccaacgtgct
      781 catcgccgac aagggggtgc gcgggctcgt gatccgtaat gtggcgaatc acaccgtgtt
      841 tcacgatgac gggcgggtcc gggtggagag tggcgccgtg atgtcgcagc tcatccccga
      901 ggcggtgcgc cgcggctggt ccggcctgga gcattacgtc ggcattccga gcaccgtcgg
      961 gggggccatc tggcagaacc tccacttcct ctccccggcg cccgagcgcg agcggacgat
     1021 gttcatcgcc gaggtgttcg agtcggccga tctcctgacc gaggagagcg agcggaagac
     1081 ggtggaccgg gagtacatgc gcttcggcta cgacgatacc atcctgcacc accgcaggga
     1141 catcgcgctc gccgcgacct tcaagctcga gcgggaggat ccggcggtga tgcaccggat
     1201 catgcaggag aacctgagct ggcgcggcag ccgtcatccc tggctcgact ggcacccgag
     1261 cgccggctcg atcttcaaga agatcgaggg ggtgggcgcc ggccgcctcg tggatgcctg
     1321 cgggctcaag ggatatcgca tcggcgacgc gcagatctcc cacatccacg ccaacatcat
     1381 ggtcaacctc ggcgaggcga cgagcgccga cgtgatcgcc ctcgtgcggc atgcgcagaa
     1441 gatggtgaag gagaattccg gctacgacct ggagccggag atcaacttcg tcggagagtt
     1501 ctagtcagcc ctggctcggc ggcggcgtgc ggtcgtcggg gggcacgaag ttcgacagga
     1561 acaggcgctc ctgcggcgtg aggctggcga tgcccgtcgc gctgatcttg tcgaggatgc
     1621 ggtccacctc gtccttgttc acggcgtgga cgctcgcccg attcacgttc cgccagttgc
     1681 ccagagcggc atccttggcg gggggcggcg cggtggccac cttgcggaac ttgcgtgccc
     1741 ccgcgctgcg ctcgagccag agcagataca gaaaggcgcc gaggaagccg cccagatggg
     1801 cgaagtgggc gacccccgac cccaccccga ggagcgagat ggcggtgtag atgagcacca
     1861 gccatcgcac ctccacgggt atgacgcccc agatgaagat ctggtcgcgc ggccagaagc
     1921 gggcataggc cagcagcacg ccgaacacgg cccccgacgc gccgatgatc ggtacggcgg
     1981 ggttgtagaa cgagagaagc ccgccggtga tgccgctgag caggtagagc acgaagaagc
     2041 gctcggagcc gatccgttgc tccaccctgg gaccgaagaa atacagcccg agcatgttga
     2101 acaggatgtg cgtgaagccg ccgtgcgcga acatgtaggt cacgagcgtc cagggccgcg
     2161 acagcagcag ggccggcacg aacacgaggg cgcggtccat ccccgccacg gtctgctgga
     2221 cgaagaagac gaagacgttc gcgatcagga atcgctggac ccacggtgtc acggagtgcc
     2281 tctcaggatt gcgtcaggtg acggccgtgc gctcgagcgc ttcgagcgcg gccgtctccc
     2341 gctcccacgt ggcgagcgcc ttgtcgagcc ggacgcgcag cgcgtcgagc tgggcgccca
     2401 gcttgtgcgc ctgttctaca ccgccggccc gggtatagag ctccgggtcg tcgagcgtcg
     2461 tcgtcagcgc ggtgatctcg ccgtcgatct cggaaacctt ccgctccgcc tcggcggcgc
     2521 ggtcgcgtgc ctggcggagg gacttgcgct gcgcatcgcc gccgctcgag tcgcggctct
     2581 gcttcgacgc ggtgcgcttc ttctcgtcca cgcgccggag cgccacctct tccgctgcac
     2641 gcaccgcggc ggcgtgcgcc cgctcctcgc tcgccacctc ccattcggcg aaggtgccgt
     2701 cgaaggtcgt gatgtgccgg tcgtgcagca cccacacctt gttggcgagg gcgcgcagca
     2761 tcgcgc
//
LOCUS       DASSYW010000758         2856 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1503338, whole genome shotgun sequence.
ACCESSION   DASSYW010000758 DASSYW010000000
VERSION     DASSYW010000758.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2856)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2856)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2856
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1503338"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..453
                     /locus_tag="VFN38_12095"
     CDS             <1..453
                     /locus_tag="VFN38_12095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012552.1"
                     /translation="VAEPPRQKILPLSSLARTYGDRLLVVGDAAGLVKPTTGGGIYYS
                     LLSAGIAADVLLPALADGDLSARRLSDYQRRWKAQLKHELDTQLSFRKLAQQMSDDDI
                     EGLFELARTDGVMPIVRKTASFNRHRRLILALLRHQPARQIFFRSFVS"
     gene            489..1523
                     /locus_tag="VFN38_12100"
     CDS             489..1523
                     /locus_tag="VFN38_12100"
                     /inference="COORDINATES: protein motif:HMM:NF026257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HET9012553.1"
                     /translation="MRELCALLAGNTAACDEARLPELLALARTHRVHLLLRREELRDE
                     ERVEAIRDTLRVRELLRVVTALDATGCEPVVFKGAALALTHYEESWRRPRLDADLIVD
                     PGSRARAASTLATLGYTRPPMTAGRYVMHQEMHVRPDPVVGEHVVDLHWKLANPNLLA
                     GLPGHAELRARASSVLLPEGTVHVASPADALVIACVHRAAHHGGSEQLLWLYDIHLVA
                     SRLTVTEWSRVADIVRRAGVAAVVGEGLARAAHAFGNCVPDTVRETLESGGREASALF
                     LHTDLRPIDWLRADVAALGPARAARLIAEHLFPPASYMREKYGFRSGALLPFAYARRI
                     AGGAAGWFRR"
     gene            complement(1542..>2856)
                     /locus_tag="VFN38_12105"
     CDS             complement(1542..>2856)
                     /locus_tag="VFN38_12105"
                     /EC_number="2.7.10.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0045226 - extracellular polysaccharide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="polysaccharide biosynthesis tyrosine autokinase"
                     /protein_id="HET9012554.1"
                     /translation="AETIPAIASNPSVQSVKATLAELQQKKTLLAERYGDKHPEMVTV
                     MASIQDATKQLNTELSKAVEAIRHDFESAVLEEKTLAQALSDQQAVAADLDRKGVAYT
                     VMEREAQSNRQLYETLLQREKELQVLANSRGNNVRLIDRATIPSAPFAPDVRRSLMLG
                     TLAGLLVAFGLVFALDSFDDTIKSAEDITRKLGLPCLGLVPDVRPSSDRPVVSATGSG
                     DFGEAIRSLRTSVAFSSDAEGSAVILVTSAQPLEGKTTTACNLAMAMAYGGAKVLLVD
                     ADLRRPSVYNGFGLENRVGLSDVLSGRAPLAAAAYRLSSPDNLWVMPAGAPPHNPSEL
                     LGSKRMEQLFEQMRTGPFEWVIIDTPPVLAVTDASILAREATGVAFVLGSAMTRRRLA
                     ERAIETLAIGGPRILGAVLNRVDSSRETYSYSDYRRREEGTATAV"
BASE COUNT          400 a         1007 c          993 g          456 t
ORIGIN      
        1 gtggcggagc cgccgcgtca gaaaatactg cccctctcga gcctcgcgcg gacgtacggc
       61 gatcggctgc tcgtggtcgg cgacgcggcc ggcctggtga agccgacgac cggcggcggc
      121 atctactaca gcctcctcag cgccggtatc gccgccgacg tgctgctgcc ggcgctcgcc
      181 gacggcgacc tgagcgcgcg gcgcctgtcc gactaccagc gccggtggaa ggcacagctg
      241 aagcacgagc tcgacacgca gctgtccttc cgcaagctcg cgcagcagat gtccgacgac
      301 gacatcgaag ggctgttcga gctggcccgc accgacggcg tcatgccgat cgtccgcaag
      361 accgccagct tcaaccggca tcggcggctc attcttgccc tgctgcgcca ccagcccgcg
      421 cggcagatct tcttccgctc gttcgtgtca tgaggccggt ctaaagaccg gcggctacga
      481 acatcatgat gcgcgagctc tgcgcgctcc tcgccggtaa taccgcagcg tgcgacgagg
      541 cgcgtctgcc cgagctcctg gcgctcgcca gaacgcaccg tgtgcacctg ctcctccggc
      601 gcgaggagct gcgcgacgag gagcgagtgg aggcgattcg cgacacgttg cgcgtgcgcg
      661 agctgcttcg cgtggtgacc gcgctcgacg cgaccggctg cgagcccgtg gtgttcaaag
      721 gcgcggcgct ggcgttgacc cattacgagg agtcgtggcg ccggccgcgc ctcgacgccg
      781 acctcatcgt cgaccccggc agccgggcac gcgccgcctc cacgctggcg acgctcggat
      841 atacgcgtcc gccgatgacc gcgggccgct acgtgatgca ccaggagatg cacgtgcggc
      901 ccgaccccgt cgtgggcgag cacgtcgtcg atctccactg gaagctggcc aacccgaacc
      961 tgttggcggg attgcccgga cacgccgagc ttcgcgcacg cgcgtcgtcc gtcttgctgc
     1021 cggaagggac cgtacacgtc gcgtcgcccg ccgacgcgct cgtcatcgcg tgcgtgcacc
     1081 gggccgcgca ccacggaggg tccgagcagc tcctgtggct ctacgacatc catctcgtgg
     1141 cctcgcgcct gacggtgacg gagtggtcgc gggtggccga tatcgtccgg cgcgccggcg
     1201 tggccgctgt agtgggcgag gggctcgcgc gcgcggcgca cgcgttcggc aactgcgtcc
     1261 cggacaccgt gcgcgaaacg ctggagtctg gcggtcgcga ggcgtcagcg ctgttcctgc
     1321 acacggacct caggccgatc gactggctgc gcgcggacgt ggcggcgctc ggtcccgccc
     1381 gcgccgctcg cctcatcgcc gagcatctgt ttccgcccgc gtcctacatg cgcgagaagt
     1441 acggctttcg cagcggcgcc ttgctgccgt tcgcgtatgc gcggcgcatc gccggcggcg
     1501 ccgcgggctg gttccggcgt tgaccggtcg ggcgcgccgt atcagaccgc cgtggcggtt
     1561 ccttcctcgc ggcgccggta gtccgagtag gagtacgtct cccgcgacga atcgacgcgg
     1621 ttgaggacgg ccccaaggat tctcggaccg ccgatcgcca atgtctcgat ggcgcgctcg
     1681 gccaggcggc ggcgggtcat cgccgatccc agcacgaacg ccacgccggt ggcctcgcgc
     1741 gccaggatcg acgcgtccgt cacggcgagc acgggcggtg tgtcgatgat cacccactcg
     1801 aacgggccgg tccgcatctg ctcgaacagc tgctccatcc gcttcgagcc caggagctcg
     1861 gacggattgt gcggcggggc gccggcgggc atcacccaga ggttgtcagg actggagaga
     1921 cggtaggcgg ccgccgcgag cggtgcgcgg ccggaaagga cgtcggacag gccgacgcga
     1981 ttctcgaggc cgaacccgtt gtacacgctg gggcgccgca ggtccgcgtc caccaggagt
     2041 accttggcgc cgccgtaggc catcgccatc gccaggttgc aggcggtggt cgtcttgcct
     2101 tcgagcggct gcgcgctcgt gaccaggatg acggcgctcc cttcggcgtc gctgctgaac
     2161 gccaccgacg tgcgcagcga gcgaatggct tcgccgaagt cgcccgaccc ggtggccgag
     2221 accacggggc gatcgctgct cgggcgcacg tccggcacca gtccgaggca ggggagcccc
     2281 agcttgcgcg tgatgtcctc ggccgacttg atcgtgtcgt cgaacgagtc gagcgcgaac
     2341 acgaggccga acgccacgag caggccggcg agcgtgccga gcatcagcga gcggcggacg
     2401 tccggcgcga acggcgccga cggaatggtg gcgcgatcga tcagccgcac gttgttgccg
     2461 cggctgttgg ccagcacctg cagctccttc tcccgctgca gcagcgtttc gtagagctgc
     2521 cggttgctct gcgcctcgcg ctccatcacc gtgtatgcca cacctttgcg atcgaggtcg
     2581 gcggccaccg cctgctgatc cgacagcgcc tgcgccagcg tcttctcttc gagcaccgcc
     2641 gactcgaagt cgtggcggat ggcctcgacg gctttcgaca gctcggtgtt gagctgcttc
     2701 gtggcgtcct gaatcgacgc catgaccgtc accatctccg ggtgcttgtc gccgtaccgt
     2761 tcggcgagca gcgtcttctt ctgctgcagt tcggccagcg tggccttgac cgactgcaca
     2821 gacgggttcg aggcgatggc cgggatggtt tcggcc
//
LOCUS       DASSYW010000759         3796 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1500577, whole genome shotgun sequence.
ACCESSION   DASSYW010000759 DASSYW010000000
VERSION     DASSYW010000759.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3796)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3796)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3796
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1500577"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..514
                     /locus_tag="VFN38_12110"
     CDS             <1..514
                     /locus_tag="VFN38_12110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012555.1"
                     /translation="LAMRSSKRLVACAAAFTLLGCATASRPSVIDDEAPNPYWSGSLQ
                     PTQQRSGALVVTGQNRVFGSVRLWAKRSGNLDRMHVTLTVAVPTASATSLRWAVLPER
                     CGSGDLPLIGFEQFPLIEVSTNGRGQVEADLPLVLAPNSVYHVNVYSGGQQLENVLTC
                     ANLKYEIPSR"
     gene            complement(586..2205)
                     /locus_tag="VFN38_12115"
     CDS             complement(586..2205)
                     /locus_tag="VFN38_12115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012556.1"
                     /translation="MKSIRQLGAVLGSATILLSAGCQPGLDVTNPNEPDVGRALASPA
                     DVKNLAISSVRSWYIGATDYEPWLMLQVTADASTANYGNFGMRFNNLEPRIPYANNSA
                     GGDRGVTEAPWNSHYSALGAANDALRAFAGGLKLQGGQAETDKYRRLAQFTQAATLGN
                     LALIFDKAFVVDETLKPGDVPELKPYKDVSAAAVAKWAALATDAAGKADEYDLTELPL
                     ADGPLTSDRLARIANTMAALTMAYTPRTAAEAATVDWAKVAAFAAKGIGTGTAGAPFD
                     VTVIGDYNNWYSGLTELGAGISWTRVDMRLINRMNPSQPAKFNGTNVTSQGTSPDARY
                     DTDYGYEPELIGDPSRGVYMQSPFFHNRYYEYSSDGLDEIGPAPYLLAAESDLVRAEA
                     LIRSGGDLVTAANLINNTRVGRGNLPPATAAEGAPTLLSYIDYERDVELLNTNGFTLF
                     QRRHVDGLQAGTIHHLPIPAKELETLGLPIYTFGGPGKEQFVGTFGVGALASRAFVGQ
                     AEMSIDLPTGESQALHFPSNLRRQSGLPRLR"
     gene            complement(2234..>3796)
                     /locus_tag="VFN38_12120"
     CDS             complement(2234..>3796)
                     /locus_tag="VFN38_12120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012557.1"
                     /translation="VAENTQLNATATKLFLGSVLSTTRLAYLVETVDSTGSAASGRKL
                     NVTGVTDLQALDIAQASISSSYRSARTIDYQASQNLTIKDRYILDAQVRRDGSSLFGP
                     DARYANFYRVAGAYRVSEDLKLPGIQELKLRAARGTAGLRPGFSDQYETYSLSAGSAT
                     KFQLGNKALEPAIQTENEFGINASFLDRFDAELVHADRVTRGAFLRIPLSLAQSGGFQ
                     NQIQNAADVGAKTTELSFQARVFDRPNFTYSFGLTGDHTTQKILRLGRAPFRVNAGGQ
                     GQDVFYYKEGESLGIIYGAKWVRSFEELKQNPLYASAVESDYVINPLGFLVRSTLRGT
                     ATEQPIKFIDAAGNDQFKIGDVNPDFSFGFSNNVTLFGVGVYALFDGQKGGDIYNFTK
                     QWMFQDFRHADEDQSGKAPADKIALPFFSGGLYNGLVASDYFVESGTYVKLRELSVSY
                     NVSPSLMSRVGMSRYANSMKLALIGRNLYTWTDYTGFDPDVTAGNDFNFRIDGFRYPQ
                     FRTITGQVSLGF"
BASE COUNT          561 a         1227 c         1341 g          667 t
ORIGIN      
        1 cctggccatg cggagtagca agcgtctcgt cgcctgcgcg gcggcattca ccctattggg
       61 ctgtgcgacc gcgtcccgtc cgtcggtgat cgacgacgag gcgccgaatc cctactggag
      121 cggcagcctc cagccgaccc agcagcgttc cggggcgctc gtcgtcaccg gccagaatcg
      181 cgtgttcgga agcgtgcgcc tgtgggcgaa gcgcagcggc aacctcgacc gcatgcacgt
      241 cacgctcacc gtcgccgtgc cgacggcgtc ggcgacctcg ctgcgctggg ccgtgctccc
      301 cgaacgctgc ggctcgggcg acctgcccct catcggcttc gagcagttcc cgctgatcga
      361 ggtctccacc aacggccgcg gccaggtgga ggcggacctc ccgctggtgc tcgcgcccaa
      421 cagcgtctat cacgtgaacg tctacagcgg cgggcagcag ctcgagaacg tgctgacctg
      481 cgcgaacctg aagtacgaga ttccctcgcg ctgagccgcg ggggtggaga tggcacacgg
      541 ggcgcaccat cgctggtgcg ccccgtgtgt cttccggact acgtgctatc tgagtcgggg
      601 cagtcccgac tgacggcgga ggttgctcgg gaagtgaagc gcctgcgact cgccggtcgg
      661 caggtcgatc gacatctccg cctggcccac gaacgcgcgg ctggccagcg cgccgacgcc
      721 gaacgttccg acgaactgct ccttgcccgg cccgccgaag gtgtagatcg ggagacccag
      781 cgtctccagc tccttggccg ggatcggcag gtgatggatg gtgcccgcct gcaggccgtc
      841 cacgtgacga cgctggaaga gcgtgaagcc gttcgtgttc agcagctcca cgtcacgctc
      901 gtagtcgatg tacgagagca gcgtgggggc gccctccgcc gccgtggcgg ggggaaggtt
      961 gccacgtccg acccgcgtgt tgttgatcag gttcgcggcg gtcacgagat ccccaccgct
     1021 ccggatcagc gcttcggcgc gaacgaggtc gctctcggcg gcgaggaggt acggcgccgg
     1081 accgatctcg tccaggccgt ccgacgagta ttcgtagtag cggttgtgga agaaggggct
     1141 ctgcatgtac acgccgcgtg acggatcgcc gatcagctcg ggctcgtagc cgtagtccgt
     1201 atcgtaccgg gcgtccggcg acgtgccctg cgaggtgaca ttcgtgccgt tgaacttggc
     1261 cggctggctc ggattcatgc ggttgatcag gcgcatgtcc acgcgcgtcc aggagatgcc
     1321 cgcgccgagc tcggtgagac cggagtacca gttgttgtag tcgccgatca cggtcacgtc
     1381 gaacggcgcg ccggcggtgc cggtgccgat gcccttcgcg gcgaaggcgg ctaccttcgc
     1441 ccagtccacc gtggccgctt cggccgcggt gcgaggcgtg tacgccatcg tcagcgccgc
     1501 catcgtgttg gcgatgcggg ccagccgatc cgaggtgagc ggcccgtccg cgaggggcag
     1561 ctccgtgaga tcgtactcgt cggccttgcc ggcggcgtcg gtcgccaggg ccgcccactt
     1621 ggccacggcc gcggccgaga cgtccttgta cggcttcagc tccggcacgt cgcccggctt
     1681 gagcgtctcg tccacgacga acgccttgtc gaagatgagc gcgagattgc cgagggtcgc
     1741 cgcctgcgtg aactgggcga ggcgccggta cttgtcggtc tcggcctggc cgccctggag
     1801 cttgagccca ccggcgaagg cgcgaagcgc gtcgttggcg gcgcccagcg cgctgtagtg
     1861 cgagttccag ggcgcttccg tgacgccgcg gtcgccaccc gcggagttgt tggcgtacgg
     1921 gatgcgcggc tcgaggttgt tgaagcgcat gccgaagttg ccgtagttcg ccgtcgaggc
     1981 gtccgcggtc acctgcagca tgagccacgg ctcgtagtcc gtggcgccga tgtaccacga
     2041 ccgcacggac gagatcgcga ggttcttcac gtcggcgggt gaggcgaggg cacgcccgac
     2101 gtctggctcg ttcggattgg tgacgtcgag gcccggctgg catcctgcgc tgagcaggat
     2161 ggtcgccgaa ccgaggacgg ccccgagctg tctgatgctc ttcatgtatt gatgctccgg
     2221 agtcgttgta tggtcagaag ccgagcgaga cttggccggt gatcgtgcgg aactgcgggt
     2281 accggaagcc gtcgatgcgg aagttgaagt cgttgccggc ggtcacgtcc gggtcgaagc
     2341 ccgtgtagtc cgtccacgtg tagaggttgc ggccgatcag cgccagcttc atgctgttcg
     2401 cgtaccgcga catgcccacg cggctcatca ggctcgggct cacgttgtag ctcaccgaca
     2461 gctcgcgcag cttcacgtac gtgccgctct cgacgaagta gtcgctcgcg acgagaccgt
     2521 tgtagaggcc acccgagaag aagggcagcg cgatcttgtc cgccggggcc ttccccgact
     2581 gatcctcgtc ggcgtgccgg aagtcctgga acatccactg cttcgtgaag ttgtagatgt
     2641 cgccgccctt ctggccgtcg aacagcgcat agacgccgac gccgaacagc gtgacgttgt
     2701 tggagaagcc gaaggagaag tccgggttca cgtcgccgat cttgaactgg tcgttgccgg
     2761 cggcgtcgat gaacttgatc ggctgctcgg tggcggtgcc acgcagggtg gagcggacga
     2821 ggaagccgag cgggttgatg acgtagtcgc tctcgaccgc gctcgcgtac agcgggttct
     2881 gcttcagctc ctcgaagctg cgcacccact tggcgccgta gatgatgccg agcgactcgc
     2941 cttccttgta gtagaagacg tcctgaccct ggccgccggc attcacgcgg aacggcgccc
     3001 ggcccagtcg gaggatcttc tgggtcgtgt gatcgcccgt gaggccgaac gagtaggtga
     3061 agttcgggcg gtcgaacacg cgggcctgga acgacagctc cgtggtcttg gcgccgacgt
     3121 cggccgcgtt ctggatctgg ttctggaagc cgcccgactg cgccagggag agcggaatgc
     3181 gcaggaaggc cccgcgggtc acgcggtcgg cgtgcaccag ctccgcgtcg aagcggtcca
     3241 ggaacgacgc attgatgccg aactcgttct ccgtctggat ggcgggttcg agcgccttgt
     3301 tgccgagctg gaacttcgtg gcgctgccgg ccgagagcga atacgtctcg tactggtcac
     3361 tgaagcccgg gcgcaggccc gccgtcccgc gcgccgcccg cagcttgagc tcctggatgc
     3421 cggggagctt caggtcctcg ctcacgcggt aggcaccggc gacgcggtag aagttcgcgt
     3481 accgggcgtc gggcccgaac agcgaggagc cgtcgcgccg cacctgggcg tcgaggatgt
     3541 agcgatcctt gatcgtgagg ttctgcgacg cctggtagtc gatcgtccgc gcgctgcgat
     3601 agctcgacga gatgctcgcc tgtgcgatgt cgagcgcctg gaggtcggtc acgccggtga
     3661 cgttcagctt ccggcccgac gcggcgctcc cggtgctgtc caccgtctcc accaggtacg
     3721 cgagccgcgt cgtggagagc acgctgccga ggaagagctt cgtcgccgtg gcgttcagct
     3781 gggtgttctc ggccac
//
LOCUS       DASSYW010000760         2524 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_832277, whole genome shotgun sequence.
ACCESSION   DASSYW010000760 DASSYW010000000
VERSION     DASSYW010000760.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2524)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2524)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2524
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_832277"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..418)
                     /locus_tag="VFN38_12125"
     CDS             complement(<1..418)
                     /locus_tag="VFN38_12125"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HET9012558.1"
                     /translation="MILLDFTLHQGSFTLEIHEQLTVRVTALFGPSGSGKTTILDAIA
                     GLRRPTSGRIAIDFRVLFDRAGGIDLPPHQRHVGYVAQDVALFPHMTVRQNVLYGRRP
                     GQKLALDAVAAMLEIQPLLDRRVPQLSGGERQRVAVA"
     gene            complement(415..1080)
                     /gene="modB"
                     /locus_tag="VFN38_12130"
     CDS             complement(415..1080)
                     /gene="modB"
                     /locus_tag="VFN38_12130"
                     /inference="COORDINATES: protein motif:HMM:TIGR02141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015412 - ABC-type molybdate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015689 - molybdate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter permease subunit"
                     /protein_id="HET9012559.1"
                     /translation="MDVWQITWFTLATAAVATLLMLPPGLLIAWALARKAFRGRLLLD
                     TLVSLPLVMPPVATGLVLLTLFAPLGPIGRLLARAGVQVVFTWKAVVLAMTVMGLPLF
                     VRTVRAGFEQVDRRFEAAASTLGAGPLRVFLTVTLPLARPAVIGGAVLGFARAIGEFG
                     ATIMIAGSIPGSTRTLAVAIYSLSEIGRTREAASLVLICAAIAFAALWWSNRLVWAAE
                     EQG"
     gene            complement(1082..1759)
                     /gene="modA"
                     /locus_tag="VFN38_12135"
     CDS             complement(1082..1759)
                     /gene="modA"
                     /locus_tag="VFN38_12135"
                     /inference="COORDINATES: protein motif:HMM:NF013697.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009897 - external side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015412 - ABC-type molybdate transporter
                     activity [Evidence IEA];
                     GO_function: GO:0030973 - molybdate ion binding [Evidence
                     IEA];
                     GO_process: GO:0015689 - molybdate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HET9012560.1"
                     /translation="MCAAISLSDALEAIAKEYAAAGGGPVRFNFAGSNTLARQLANGA
                     PADLFLSADEAQMDVAARAGAVDPASRVNLLGNRLAIVARPGTPSIDAAADLARPGIG
                     RIAIGDPLAVPAGVYARRYLESAGLWPSLADRIVPVGNVRAALAAVMNGSADAAIVYE
                     SDTVTAGTLKSIVIAGSGAPRIVYPAALVTRAANRAEAERFLAFLRGPQAAAVFARYK
                     FAPLGPH"
     gene            1746..2303
                     /locus_tag="VFN38_12140"
     CDS             1746..2303
                     /locus_tag="VFN38_12140"
                     /inference="COORDINATES: protein motif:HMM:TIGR00638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HET9012561.1"
                     /translation="MAAHTVTGCGETAANARSATNGTTRSMVPDFIRLYVDFVTVQRD
                     SSAMDLVTPRKAAGQLGVSYATLKQWIYKGSVRTRRTPGGHHRIPLTEIDRLLAASGK
                     APRRTRTRAGGQIVTLSGRNQLRGIVEEVRVEGLLAQVRLRVGDQTLTAVITRDAIDE
                     LRLRRGDEALAVIKATEVMIARAGG"
BASE COUNT          440 a          871 c          873 g          340 t
ORIGIN      
        1 gcgcgaccgc gacgcgctgc cgctcgccgc cggagagctg gggcacccgc cggtccagga
       61 ggggctggat ctccagcatg gcggccaccg catcgagcgc cagcttctga cccggacgtc
      121 gtccatagag cacgttctgg cggacggtca tatggggaaa gagcgccaca tcctgcgcga
      181 cgtagccgac gtgtcgctgg tgcggcggga gatcgatgcc cccggcacgg tcgaagagga
      241 cccggaaatc gatcgcgatc cgtcctgagg tcggccggcg gagtccggca atcgcgtcca
      301 gaatcgtcgt ttttccggat ccggacggac cgaacagcgc cgtcacccgc acggtgagct
      361 gttcgtggat ctcgagcgtg aagctcccct ggtgcagcgt gaagtccagc aggatcaacc
      421 ctgctcctcc gccgcccaga ccaaccggtt ggaccaccag agcgcggcga acgcaatcgc
      481 cgcgcagatg aggacgaggg aggcggcttc gcgggtgcgc ccgatctccg agagcgagta
      541 aatggccacc gcaagcgtcc gggtggagcc ggggatgctc ccggcgatca tgatcgtcgc
      601 cccgaactct ccgatggcgc gggcaaaccc gaggaccgcg ccgccgatga ccgccggtcg
      661 tgcgagcggg agcgtcaccg tcaggaacac tcggagcgga ccggcgccca gggtcgatgc
      721 cgcggcctcg aaccggcgat cgacctgctc gaagcccgct cgcaccgtcc ggacgaagag
      781 cggcagcccc atgaccgtca tcgcgaggac gactgccttc caggtaaaga ccacctgcac
      841 cccggcgcgg gcgagcagac ggccaatcgg gccgagcggc gcgaacagcg tcaggaggac
      901 caggccggtc gccaccggcg gcatcaccag cggaagcgag accagcgtgt cgaggagcag
      961 acgcccgcga aacgccttcc gcgcgagcgc ccaggcgatc agaagtcccg gcggcagcat
     1021 cagcagcgtc gcgacagcgg cggtcgccaa cgtgaaccag gtgatctgcc agacgtccac
     1081 gtcagtgcgg gcccagcggc gcgaacttgt agcgggcgaa cacggccgcc gcctggggac
     1141 cgcgcaggaa ggcgaggaac cgctccgcct cggcacgatt ggccgcgcga gtgacgagcg
     1201 ccgccggata cacgatgcgc ggcgcgcccg atccggcaat gacgatggat ttcagcgtgc
     1261 cggccgtcac cgtgtcgctt tcgtacacga tcgcggcgtc ggcgctgccg ttcatgaccg
     1321 ccgcgagcgc ggcgcggacg tttcccaccg gcacgatccg atcggcaagg ctgggccaca
     1381 atcccgcgga ttccagatac cggcgcgcgt agacacccgc gggaaccgcc aacggatcgc
     1441 cgatcgcgat tcggccgatg ccagggcgcg ccaggtccgc cgcagcgtcg atggacggcg
     1501 tgcccgggcg cgcgacgatc gcgaggcggt tgccgagcag gttgacacgg gaggccggat
     1561 cgaccgcgcc tgcccgcgcg gccacgtcca tctgcgcttc gtcggcgctt aagaagagat
     1621 cggccggggc gccgttcgcg agctgccgcg cgagcgtatt cgaaccggcg aaattgaacc
     1681 tgaccggtcc acctccggcc gccgcatact ccttcgcgat cgcttccagc gcatcactca
     1741 ggctgatggc cgcgcacacg gtgaccggct gcggcgagac cgcagcaaac gccagaagcg
     1801 ccaccaacgg gacgacgcga agcatggttc ccgattttat acgactttat gttgattttg
     1861 ttacggttca gcgcgattct agcgccatgg atctcgtcac cccgcggaaa gcggccggcc
     1921 agctcggcgt gagctacgcg acgctgaagc aatggatcta caagggcagc gtgcgcaccc
     1981 ggcggactcc gggagggcac caccgcattc ccctgacgga aatcgaccgc ctgctggcgg
     2041 cgagcggaaa agcgccgcgc cggacgcgaa cgcgcgccgg cgggcagatc gtcacgctca
     2101 gcggcagaaa tcagctgcgc gggatcgtcg aggaagtgcg cgtcgaagga ttgctcgctc
     2161 aggtgcggct gcgggtgggc gaccagaccc tgacggcggt catcacccgc gacgcgatcg
     2221 acgagctcag gctgcggcgc ggcgacgagg cgctggccgt catcaaggcg accgaggtga
     2281 tgatcgcccg cgcgggcggc taacgcagag cccgccgccc gacctcctct ccgccgctcg
     2341 cgtgtggata ctcgtccgtc gtgcgcgtcc tgattgccgg ggaaggcgtc cgtgtccgcg
     2401 gaaccgccac gatcgccgcc gacgggctcg atctttcatg cgggtatcgg cgaaggcgcc
     2461 gatttcgccc cggtcgcagt gcctttcgcc tcgacgatga ctctcgtcgg tcttctactt
     2521 gacg
//
LOCUS       DASSYW010000761         2862 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1195068, whole genome shotgun sequence.
ACCESSION   DASSYW010000761 DASSYW010000000
VERSION     DASSYW010000761.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2862)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2862)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2862
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1195068"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1401
                     /gene="priA"
                     /locus_tag="VFN38_12145"
     CDS             <1..1401
                     /gene="priA"
                     /locus_tag="VFN38_12145"
                     /inference="COORDINATES: protein motif:HMM:TIGR00595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005658 - alpha DNA polymerase:primase
                     complex [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0003688 - DNA replication origin binding
                     [Evidence IEA];
                     GO_function: GO:0016818 - hydrolase activity, acting on
                     acid anhydrides, in phosphorus-containing anhydrides
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HET9012562.1"
                     /translation="GERYDAWLALQRGDKRIAVGARSAIFAPLKNLGAIVVDEEHESS
                     YKQGEAPRYHAREVAIVRARAEGAVVVLGSATPSLESWANAASGKYELLTLPDRAGGA
                     QLPLVEVVDLRAEQPKRPPSDNAAGEAAFAYAIGPALEAAVEDRLERREQSILLLNRR
                     GYSAFIQCGTCGDVAVCPNCSISLTYHRSPERLVCHYCLHSEALHPSCNRCGGVRLRQ
                     RGLGTQQVERLLAERYPTARIARMDVDTTSGKWAHTEILDRVGAGEVDILLGTQMIAK
                     GLDFPNVTLVGVIDADVGINLPDFRASERCFQLLSQVAGRAGRGPKGGAVLIQTRCPS
                     HHAVRCAVTHDYHAFVEQELAGRAHPAYPPNVRLANVVVSGTQEDATARLATRLAGWL
                     HKLLAARSAPGVSVIGPAPCPVERVKQRWRWHVLIKAERPQELGRVAHYLVERFEIPK
                     QFGLRMTVDRDPVALL"
     gene            1492..2619
                     /locus_tag="VFN38_12150"
     CDS             1492..2619
                     /locus_tag="VFN38_12150"
                     /inference="COORDINATES: protein motif:HMM:NF044507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012563.1"
                     /translation="MTFYPPDLSKPLLAAAPDARFVPAPADGVLPEGFFSSTNLPTYV
                     KVGGEWRLPREPRMDAVLVLDRDGVLWTREGRRVKRGDRVGVGLAEDGREGILVHATA
                     FTGEPAAEAEFKFMASEVSREKPTDYSLMAKLLLDERDRGGYPVWVAGPALVHSRARN
                     DMVWFIENGFVGAMLAGNAVAVHDIEASIFGTTLGMTGQGEATSGGHGAHMRAINKVR
                     AAGSIAAAVANGTITDGIMHALVTAKIPFVLTGSIRDDGPLPDVITDAIAAQDAMRAH
                     AIKATMAILIATALHAIATGNMLPAFVTEKDGTLRELTTICVDSAEFVVSKLKDRGTH
                     QAFGVVTNAQDFMHILRLYIERELDQRRDAAPAARDLAAAR"
     gene            2616..>2862
                     /locus_tag="VFN38_12155"
     CDS             2616..>2862
                     /locus_tag="VFN38_12155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012564.1"
                     /translation="MTDEVRARFLAGIAAQIAPERVKELHLFGAIRQGGAESGVAVIA
                     VEPVDAAAGDAVTLDVDGGYVPPPAVADAAPVETPAEV"
BASE COUNT          400 a         1062 c         1029 g          371 t
ORIGIN      
        1 ggggaacgct acgacgcatg gctggcgttg cagcggggcg acaagcgcat cgccgtcggc
       61 gcgcgctcgg ccatctttgc gccgctgaag aacctcggcg ccatcgtcgt ggacgaggag
      121 cacgagtcga gctacaagca gggcgaggcg ccgcgctatc acgcgcgcga ggtggccatc
      181 gtgcgcgcgc gcgccgaggg tgcggtcgtc gtgctgggca gcgcgacccc gagcctggag
      241 agctgggcca acgcggcgag cgggaagtac gagctgctca ccctccccga ccgcgccggc
      301 ggcgcgcagc tccccctcgt ggaagtcgtg gacctccgcg ccgagcagcc gaagcggccg
      361 ccgagcgaca acgccgccgg cgaggcggct ttcgcgtacg ccatcgggcc cgcgctcgag
      421 gccgcggtcg aggaccgcct cgagcgccgg gagcagagca tccttctgct caaccgccgc
      481 ggctactcgg cgttcatcca gtgcggcacc tgcggcgacg tcgccgtgtg tcccaactgc
      541 agcatcagcc tcacctatca tcgctcgccc gagcgcctcg tctgccacta ctgcctgcac
      601 tccgaggcgc tgcacccgag ctgcaaccgg tgcggcggcg tgcggctgcg ccagcgcggg
      661 ctcggcacgc agcaggtgga gcggctgctc gccgagcgct atcccacggc gcgcatcgcg
      721 cggatggacg tggacacgac gagcggcaag tgggcgcaca ccgagatcct cgatcgcgtc
      781 ggcgccggcg aggtggacat cctcctcggc acgcagatga tcgccaaggg gctcgacttc
      841 cccaacgtca cgctcgtggg ggtgatcgac gccgacgtcg ggatcaacct ccccgacttc
      901 cgcgcctcgg agcgctgctt ccagctcctc agccaggtgg ccggccgcgc cggccgcggg
      961 ccgaagggcg gggcggtgct gatccagacg cgctgtccct cgcaccatgc cgtccgctgc
     1021 gcggtgaccc acgactatca cgccttcgtg gagcaggagc tggcggggcg cgcgcatccc
     1081 gcgtatcccc ccaacgtgcg cctcgccaac gtcgtcgtga gcggcaccca ggaggacgcc
     1141 accgcgcggc tggcgacgcg tctcgccgga tggctgcaca agctcctcgc ggcgcgctcc
     1201 gcgcccggcg tcagcgtcat cggccccgcc ccctgcccgg tggagcgggt gaagcagcgc
     1261 tggcggtggc acgtgctcat caaggccgag cggccgcagg agctcgggcg ggtggcgcac
     1321 tatctggtgg agcggttcga gatccccaag cagttcgggc tccggatgac ggtggaccgg
     1381 gatccggtgg cgctcctcta gcggcgcggg ccggcgcgga tccgccgatc cccccgtcag
     1441 gatgcgcccg tcccccttct cggacgccgt cgccgcgacg atctttcggg cgtgaccttc
     1501 tacccgccgg acctctcgaa gcccctcctc gccgcggccc ccgacgcccg gttcgtaccg
     1561 gcgccggccg acggcgtgct gcccgaggga ttcttctcgt ccaccaacct gccgacgtac
     1621 gtgaaggtgg ggggcgagtg gcgcctgccg cgcgagcccc gcatggacgc cgtgctggtg
     1681 ctggaccgcg acggggtgct gtggacgcgc gaggggcgcc gcgtcaagcg cggcgaccgc
     1741 gtgggcgtcg ggctggcgga ggacgggcgc gaggggatcc tcgtccacgc caccgccttc
     1801 accggcgagc ccgcggccga ggccgagttc aagttcatgg cgagcgaggt gtcgcgcgag
     1861 aagccgaccg actactcgct gatggcgaag ctcctgctcg acgagcgcga ccgcggcggc
     1921 tatccggtgt gggtcgccgg ccccgccctc gtgcactcgc gcgcccgcaa cgacatggtc
     1981 tggttcatcg agaacggctt cgtgggcgcg atgctcgccg gcaacgccgt ggcggtgcac
     2041 gacatcgagg ccagcatctt cggcacgacg ctcggcatga cggggcaggg ggaggccacc
     2101 tccggcgggc acggcgcgca catgcgcgcc atcaacaagg tgcgcgcggc cggctccatc
     2161 gccgccgccg tcgccaacgg caccatcacc gacggcatca tgcacgcgct ggtgacggcg
     2221 aagatcccct tcgtcctcac cggctccatc cgcgacgacg gtccgctgcc cgacgtcatc
     2281 accgacgcca tcgccgcgca ggacgccatg cgcgcgcacg cgatcaaggc gacgatggcg
     2341 atcctcatcg ccaccgcgct gcacgcgatc gccaccggca acatgctgcc cgccttcgtc
     2401 accgagaagg acggcacgct gcgcgagctg acgacgatct gcgtggactc cgccgagttc
     2461 gtcgtgagca agctgaagga ccgcggcacc caccaggcgt tcggcgtggt gacgaacgcg
     2521 caggacttca tgcacatcct gcggctgtac atcgagcgcg agctcgacca gcgccgcgac
     2581 gcggcccccg cggcgcgcga cctggcggcg gcccgatgac ggacgaggtg cgcgcccgct
     2641 tcctcgccgg catcgcggcg cagatcgccc ccgagcgggt gaaggagctg catctcttcg
     2701 gcgccatccg gcagggcggc gccgagagcg gcgtcgccgt gatcgcggtg gagcccgtgg
     2761 acgccgccgc cggggacgcc gtcacgctgg acgtggacgg cggctacgtg ccgccgccgg
     2821 cggtggcgga cgccgcaccg gtcgagacgc cggccgaggt gg
//
LOCUS       DASSYW010000762         3364 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_478541, whole genome shotgun sequence.
ACCESSION   DASSYW010000762 DASSYW010000000
VERSION     DASSYW010000762.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3364)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3364)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3364
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_478541"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..190)
                     /locus_tag="VFN38_12160"
     CDS             complement(<1..190)
                     /locus_tag="VFN38_12160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="CYTH domain-containing protein"
                     /protein_id="HET9012565.1"
                     /translation="MLEVELKSVVDDLARRRAMVEAAGAMLVFEGHLADRRYDTAEHA
                     LAARDHVLRVRAYGGGDSV"
     gene            complement(194..889)
                     /locus_tag="VFN38_12165"
     CDS             complement(194..889)
                     /locus_tag="VFN38_12165"
                     /inference="COORDINATES: protein motif:HMM:NF024811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HET9012566.1"
                     /translation="MTTVVLFDIDGTILWTDGAGRRAVYRALEEVFGTPVPEGHEFDG
                     KTDPQIVRELMQRAGLDHRQIHERLPHALARYVELLNAELGDADHADKLYPGVSPLLD
                     ALESRDDVLLGLLTGNVREGATTKLTAVGIAPERFKVGAFGSDHADRPELPAIARARA
                     EALLGSPVSGRNVVVIGDTPADMGCGRGIGARAIGVATGRYSADELRACDAFAVFPDL
                     SDTAAVMRAILGD"
     gene            complement(886..1839)
                     /locus_tag="VFN38_12170"
     CDS             complement(886..1839)
                     /locus_tag="VFN38_12170"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HET9012567.1"
                     /translation="MASTLHATDAGTTSAPRVGFTTTDALLLLMALIWGINFAVVKFA
                     TGAFAPLAFNTLRITLATVVLFGVVLASGQALPRGRDRMALLGLGTLGNGIYQIFFIE
                     GIARTRAGDAALLIAAAPALMAVMGWLRGSERTGPRGVAGIALSLTGIGLVVFGDQGG
                     AARGASTLLGDALILLGCVCWSAYTVLLKPYTERIDGVVLSAVTMAGGAVPLLLLALP
                     ALARTPWSTVSVGAWAAVLYSGLFALALAYFFWYRGVRILGPTRTGMYANLQPVIALL
                     VAWATLGETPQLPQLAGAACIFAGLVLTRLDSPASTATVCE"
     gene            1901..2329
                     /locus_tag="VFN38_12175"
     CDS             1901..2329
                     /locus_tag="VFN38_12175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012568.1"
                     /translation="MHVTFALFADAANLSQEGKLNILGVFDALQVATLPAMHPRATLV
                     VHLKGSASDAGKHRVTLQWLSPSGTELWSSDGELGIAPPPQGVVDMDFPLIAQLDLPL
                     DLAGGYLMRVGLDGSTHAEVGLQVRTAANAPAAPTPAWMS"
     gene            2406..2798
                     /locus_tag="VFN38_12180"
     CDS             2406..2798
                     /locus_tag="VFN38_12180"
                     /inference="COORDINATES: protein motif:HMM:NF023621.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3597 domain-containing protein"
                     /protein_id="HET9012569.1"
                     /translation="MSIFGTIMGKIMGNAARKDAAAENAARPASAPAAPAATAVATPA
                     ATVDVAARLDAMKAASKQTLNWRESIVDLMKLVGIDSDITNRRALAHELGYTGDLNDS
                     ATMNVWLHKQVMQKLAENGGQVPANLLD"
     gene            2864..3265
                     /locus_tag="VFN38_12185"
     CDS             2864..3265
                     /locus_tag="VFN38_12185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012570.1"
                     /translation="MLAPALRSSRETLAAQDRSCPFCCSQIPREAKKCRACAEWVVGT
                     SGGVAAGMLRLLALLWAVVTALAAAGLWTLGQGIVRWVWMHAVDQAITPQVVNLLLYA
                     VIAVVVLKGLMVSVGLALLARLAPQRPRWWT"
BASE COUNT          515 a         1207 c         1192 g          450 t
ORIGIN      
        1 ggacgctgtc gccgccgccg tacgcgcgca cgcgcagcac gtgatcccgc gccgcgagtg
       61 catgctcggc cgtgtcgtac cgccggtcgg cgagatgccc ctcgaagacg agcatggcgc
      121 cggcggcctc caccattgcg cgccggcgcg ccaggtcgtc caccacgctc ttgagctcga
      181 cctcgagcac gcgtcagtct cccaggatgg cgcgcatcac cgccgccgtg tcggagaggt
      241 ccggaaagac cgcgaacgcg tcgcaggcgc gcagctcgtc cgccgagtag cggccggtgg
      301 ccacgccgat cgcgcgcgcg ccgatgccgc ggccgcagcc catgtcggcg ggcgtgtcgc
      361 cgatgacgac gacgtttcgt cccgacaccg ggctgcccaa cagcgcctcg gcccgcgccc
      421 gcgcgatggc gggcagctcc ggacggtcgg cgtgatcgga cccgaacgcg ccgaccttga
      481 atcgctccgg cgcgatgccc accgccgtca gcttcgtcgt cgccccctcg cgcacgttac
      541 cggtgagcag gccgaggagc acgtcgtcgc gcgactccag cgcatcgagc agcggcgaca
      601 cgccggggta cagcttgtcg gcatgatccg cgtcgccgag ctccgcgttc agcagctcca
      661 cgtagcgggc gagcgcatgt ggcaaccgct cgtggatctg gcggtgatcc agtcccgcgc
      721 gctgcatcag ctcgcgcacg atctgcgggt cggtcttgcc gtcgaactcg tggccttccg
      781 gcacgggcgt gccgaacacc tcctccagcg cgcgatacac cgcgcgccgc ccggcgccgt
      841 cggtccacag gatcgtgccg tcgatgtcga acagcacgac cgtcgtcatt cgcacaccgt
      901 ggcggtcgac gccgggctgt cgagtcgcgt gaggacgagc cccgcgaaga tgcaggccgc
      961 gccggcgagc tgcggcagct gcggcgtctc gccgagcgtc gcccacgcga cgaggagcgc
     1021 gatcaccggc tggaggttgg cgtacatgcc ggtgcgcgtg gggccgagga tgcgcacccc
     1081 gcgataccag aagaagtacg cgagcgccag cgcgaacagc ccgctgtaga ggacggccgc
     1141 ccaggcgccc acgctcaccg tgctccacgg cgtccgggcg agcgcgggca gcgcgagcag
     1201 cagcaggggc accgcgccgc cggccatcgt caccgcggag agcacgacgc cgtcgatccg
     1261 ttcggtgtac ggtttgagca gcacggtgta cgcggaccag cacacgcagc ccagcaggat
     1321 gagcgcatca cccagcagcg tggaggcgcc ccgcgccgcg ccgccctggt cgccgaacac
     1381 gacgagcccg atgcccgtca gcgagagggc gatgcccgcc acgccgcgcg ggccggtgcg
     1441 ctcgctgccg cggagccatc ccatgacggc catcagcgcg ggagccgcgg cgatgaggag
     1501 ggcggcgtcg ccggcgcggg tgcgcgcgat cccttcgatg aagaagatct ggtagatccc
     1561 gttgcccagc gtgccgagcc cgaggagcgc catccggtcg cgaccgcggg gcagcgcctg
     1621 tccgctcgcc agcaccacac cgaacagtac gacggtggcg agggtgatcc ggagcgtgtt
     1681 gaaggccagc ggggcgaacg cgcccgtggc gaacttcacc accgcgaagt tgatccccca
     1741 gatgagggcc atcaacagca gcagggcgtc ggtggtggtg aaaccgacgc ggggtgccga
     1801 ggtcgtgccc gcgtcggtcg catgaagcgt ggatgccatg ccgaaagcta atgggggtgg
     1861 agccgtcgca aaccgcgccg cgccacgcta gcttcgctcc atgcatgtca ccttcgcgct
     1921 gttcgccgac gccgccaacc tgtcgcagga aggaaagctc aacatcctcg gcgtgttcga
     1981 cgcgctgcag gtggcgacgc tgcccgccat gcacccgcgg gccacgctcg tcgtgcacct
     2041 gaaggggagc gcgtccgacg ccggcaagca tcgcgtgacg ctgcagtggc tgagcccgag
     2101 cggcacggag ctctggagca gcgacgggga gctcggcatc gcgccgccgc cacagggtgt
     2161 ggtggacatg gacttcccac tcatcgccca gctcgacctg ccgctcgacc tcgcgggcgg
     2221 ctacctgatg cgcgtcggtc tcgacggttc cacgcacgcc gaggtgggcc tccaggtccg
     2281 caccgccgcc aacgccccgg cggctcccac gccggcgtgg atgagctgac ggagaccggg
     2341 ccggttcctt gcgagagtcg gttcgcctgc ccaagcggcg ggcgactttc cacaaggaga
     2401 cggacatgag catcttcgga acgatcatgg gcaagatcat ggggaacgcc gcgcgcaagg
     2461 acgcggcggc cgagaacgcc gcgcgccccg cgtccgcccc cgctgcgccg gcggcgaccg
     2521 ccgtcgccac gcccgccgcg acggtggacg tggccgcccg gctcgacgcg atgaaggcgg
     2581 cctccaagca gaccctcaat tggcgcgagt ccatcgtgga tctcatgaag ctggtcggca
     2641 tcgacagcga catcacgaac cgccgcgccc tcgcccacga gctgggctac actggcgacc
     2701 tgaacgacag cgcgaccatg aacgtgtggc tgcacaagca ggtcatgcag aagctggccg
     2761 agaatggcgg ccaggtgccg gccaacctgc tggactagcg ggcggacacc agcggcggcg
     2821 tcgccccgta ggggaggtca tcccctcgcc ggagtgacgt cgcatgctcg cccccgctct
     2881 ccgctcgtcg cgcgaaacgc tggcggcgca ggacaggtcc tgccccttct gctgttctca
     2941 gattccgcgc gaggcgaaga agtgtcgcgc ctgcgccgag tgggtggtgg gcacgtcggg
     3001 gggcgtcgcc gccggcatgc tgcgactgct cgccctgctc tgggcggtgg tcaccgcgct
     3061 cgccgccgcc ggcctgtgga cgctgggcca ggggatcgtg cgctgggtgt ggatgcacgc
     3121 ggtcgatcag gcgatcacgc cgcaggtcgt caacctcctg ctctacgccg tgatcgccgt
     3181 cgtggtgctc aaggggctga tggtgagcgt gggactcgcg ctgctggcgc gactggcccc
     3241 tcagcggccg cgatggtgga catgaaacgg tgaggcggtg agtgggtgag gtcgtgacgg
     3301 cgtcaccgcc tcagcacctc accgcctcac tgcctcactg cctctctaca ctgcgtccga
     3361 gaga
//
LOCUS       DASSYW010000763         2415 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_676146, whole genome shotgun sequence.
ACCESSION   DASSYW010000763 DASSYW010000000
VERSION     DASSYW010000763.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2415)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2415)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2415
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_676146"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..665
                     /locus_tag="VFN38_12190"
     CDS             <1..665
                     /locus_tag="VFN38_12190"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HET9012571.1"
                     /translation="VHVVAPETRPLERVLGPELGDLVHRVHVEHGVVFHLGQKPRELV
                     SGAVILESGERVAATFVVAGVGVRPNVQLAEGAGLTVDRGVVVDAQLRTSAPNVLAAG
                     DVARYPDARTGEMIRVEHWVAAQRQARTAARNILGAGERFTAVPFFWSAHYDLTISYA
                     GHAERWDAIEIDGSLDARDCEVRYVAGGRTLATVTIGRDRANLEAELMMERESTLAGS
                     AR"
     gene            728..1279
                     /gene="folE"
                     /locus_tag="VFN38_12195"
     CDS             728..1279
                     /gene="folE"
                     /locus_tag="VFN38_12195"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003934 - GTP cyclohydrolase I activity
                     [Evidence IEA];
                     GO_process: GO:0042559 - pteridine-containing compound
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0046654 - tetrahydrofolate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE"
                     /protein_id="HET9012572.1"
                     /translation="MADLVRRQLALIGEDPDREGLLKTPDRVSRSLGWLTRGYALSVA
                     DAVGDAVFEEVHSSMVMVRDIEFYSLCEHHMLPFFGKAHVAYVPNGRIVGLSKLPRIV
                     EIFARRLQVQERLTEQIADALDDVLAPAGVGVVLEASHLCMMMRGVEKQNSATITSAL
                     RGVFRDCPMTRAEFLRLAHRSER"
     gene            complement(1292..>2415)
                     /locus_tag="VFN38_12200"
     CDS             complement(1292..>2415)
                     /locus_tag="VFN38_12200"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HET9012573.1"
                     /translation="ESERKSIFFAQISDSHIGFSKEANKDVTATLQEAVGRLNALPQR
                     PAFVLHTGDITQLAKPSEFDTANEVLKGIRTDRVLYVPGEHDVAGDNGASYLQRYGKG
                     TSGGGWYSFDHSGVHFIGLVNVLDLKAGGLGSLGVEQLAWLGKDVARLSSSTPIVLFA
                     HVPLWTVYPEWGWGTDDSEQALALLKRFGSVTVLNGHIHQIMQKVEGHMSFHTAMSTA
                     FPQPAPGTAPAPGPMTVDAQRLKSVLGITEVTFVPGRSALAVVDATISGLPPAFAAAS
                     QDAMANRRRATRALGANEIGIDNFNFTPRSLMVKAGTKVTWINDDDVPHLIVSVTGAF
                     KPSPVLDTGQRFSAVIGRTGVQRYFCSLHPMMQGQVVAT"
BASE COUNT          362 a          810 c          852 g          391 t
ORIGIN      
        1 aggtgcacgt cgtcgccccc gaaacgcgcc cgctcgaacg cgtgctcggt ccggaactcg
       61 gcgacctcgt gcatcgcgtg cacgtcgagc acggcgtcgt cttccacctg ggccagaagc
      121 cgcgcgagct ggtgtcgggc gccgtgatcc tcgagagtgg cgagcgtgtg gccgcgacct
      181 tcgtcgtcgc cggcgtggga gtgcggccca acgtgcagct cgcggaaggt gccgggctca
      241 cggtcgaccg cggcgtggtg gtggacgcgc agcttcgtac gagcgcaccc aacgtgctcg
      301 ccgcgggcga cgtggcgcgc tatcccgacg cacgaaccgg tgagatgatc cgcgtcgagc
      361 actgggtcgc ggcgcagcgg caggcccgga cggcggctcg caacatcctc ggcgcaggag
      421 agcgcttcac cgccgttcct ttcttctgga gcgcgcacta cgacctgacg atctcctatg
      481 ccggccacgc cgagcggtgg gatgcgatcg agatcgacgg gtcgctggac gcgcgcgact
      541 gcgaggtgcg ctacgtggcc ggcggccgca cgctcgcgac ggtgacgatc gggcgggacc
      601 gggccaacct ggaggcggag ctgatgatgg aacgggaatc gaccctggcc gggagcgcgc
      661 gatgaccgcg cgcccggagc gtgatctcat cctgcacgac gacgacgccg gaccggcgag
      721 cgacgagatg gccgacctcg tgcgccggca gctcgccctg atcggcgagg atcccgaccg
      781 cgaggggctg ctcaagactc ccgatcgcgt gagccgctcg ctcggctggc tgacgcgagg
      841 atacgcgctg agcgtcgccg acgcggtcgg cgacgcggtg ttcgaggaag tgcactccag
      901 catggtgatg gtgcgcgaca tcgagttcta ctcgctgtgc gagcaccaca tgctcccctt
      961 cttcggcaag gcgcacgtcg cctatgttcc caacggccgc atcgtcgggc tctccaagct
     1021 gccgcgcatc gtggagatct tcgcgcgccg cctccaggtg caggagcggc tcaccgagca
     1081 gatcgccgac gcgctggacg acgtgctcgc gccggcgggc gtgggcgtgg tgctcgaggc
     1141 ctcgcacctc tgcatgatga tgcgcggcgt ggagaagcag aactcggcca cgatcaccag
     1201 cgcgctccgc ggcgtcttcc gcgattgccc gatgacgcgc gccgagttcc tgcggctggc
     1261 gcatcggagc gaacggtagc agtcacgcat ctcaggtggc cacgacctgc ccctgcatca
     1321 tcggatgcag ggagcagaag tagcgctgca ctcccgtgcg cccgatgacg gcgctgaacc
     1381 gctgtcccgt atcgagcacc ggcgagggct tgaacgcgcc cgtgacgctc acgatcaggt
     1441 gcggcacgtc gtcgtcgttg atccaggtca ccttcgtccc cgccttcacc atcagggatc
     1501 gcggagtgaa gttgaagttg tcgatgccga tctcgttcgc gccgagggcg cgggtggcgc
     1561 gccgtcgatt tgccattgcg tcctgtgacg cggccgcgaa ggccggcgga agtccggaga
     1621 tcgttgcatc gaccaccgcg agcgcactgc gtcccggcac gaaggtcacc tccgtgatgc
     1681 cgagcacgct cttcagccgc tgcgcgtcga ccgtcatggg gccgggtgcg ggcgcggtgc
     1741 ctggcgcggg ctgcgggaaa gccgtggaca tcgccgtgtg aaaggacatg tgcccttcca
     1801 ccttctgcat gatctggtgg atgtgtccat tgagcacggt gacggagccg aagcgcttga
     1861 gcagggcaag cgcctgctcg gaatcgtcgg tgccccatcc ccactcggga tagaccgtcc
     1921 acagcggtac gtgcgcgaac agcacgatcg gcgtgctgct cgacaggcgc gccacgtcct
     1981 tgccgagcca cgcgagctgc tcgacgccga gcgagccgag accgcccgcc ttcaggtcga
     2041 gcacgttcac gagcccgatg aagtggacgc ccgaatggtc gaagctgtac cacccgccgc
     2101 cgctggtgcc cttgccgtag cgttggagat acgacgcgcc gttgtcgccg gcgacgtcgt
     2161 gctcacccgg cacgtagagc acgcggtcgg tgcggatgcc cttgagcacc tcgttcgcgg
     2221 tgtcgaactc gctcggcttc gccagctggg tgatgtcgcc cgtgtgcagc acgaaggcgg
     2281 ggcgctgcgg cagggcgttg agccggccga ccgcctcctg caaggtggcg gtgacgtcct
     2341 tgttcgcttc cttgctgaag ccgatgtggc tgtcgctgat ctgggcgaag aagatgctct
     2401 tccgctcgct ctcgc
//
LOCUS       DASSYW010000764         2381 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_319760, whole genome shotgun sequence.
ACCESSION   DASSYW010000764 DASSYW010000000
VERSION     DASSYW010000764.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2381)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2381)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2381
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_319760"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(140..982)
                     /locus_tag="VFN38_12205"
     CDS             complement(140..982)
                     /locus_tag="VFN38_12205"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HET9012574.1"
                     /translation="MPGRMRIAAWTVVAALVAAPAGAQLVETNQAGLRMGHVHLNVTD
                     VDAHKRFWTAVMGGTIVTHGPLELIQFPGTYLILQEVEQPAPAPAGSIINHIGFVVQD
                     MPKMLAAWKAAGLPIEPTENPNEVYLLAPDGIRVEVYGEPALPTAVAMNHVHFAPPDV
                     PAIKRWYVRMFGVNPTRRPCVACVSKPRMIETGDLPGGVNLSFSPPGNVLVKNPLPTR
                     GRAIDHIGFDVQDLDATIRRLEAQGVKVEGPVRQLPGTRVRVALLTDPWGTSIELTES
                     LTPP"
     gene            complement(990..1658)
                     /locus_tag="VFN38_12210"
     CDS             complement(990..1658)
                     /locus_tag="VFN38_12210"
                     /inference="COORDINATES: protein motif:HMM:NF024946.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HET9012575.1"
                     /translation="MLVLALPAVGAPQSTGANPELVTDRPGFGESSAVVGRGTLQVET
                     GLVVARADHEHPRDTTAQVLLRAGVSSRVELRFAVDGHDVDVGGKVKLLDAARAGLDL
                     AVIPYLSRDPGFKVAGGRGLPHGFELSGTFNATDGRTDGGRAWQHEISLSLDHSLGAR
                     LGAYGEVDGAFAGHGCACSVDGGITVGAGAHGQFDVEVGHRVHGEAQDWFAGVGFAVR
                     RLHR"
     gene            complement(1672..>2381)
                     /locus_tag="VFN38_12215"
     CDS             complement(1672..>2381)
                     /locus_tag="VFN38_12215"
                     /inference="COORDINATES: protein motif:HMM:NF019157.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tannase/feruloyl esterase family alpha/beta
                     hydrolase"
                     /protein_id="HET9012576.1"
                     /translation="CTGQDDASCLTPAQVQSAQAMYAGATHPGTKARVLPGLAPGAEL
                     GWAVLGSPRPILFAADAFKYIVHKDPAWEGSRFDPALDFDRAFAADPDDALGSTNPDL
                     RTFFARGGKLLLYHGWSDPQVTPYNTIEFFQKVVATNGGAGVGTSVQLYMVPGMNHCN
                     GGPGTDTFDKVAAMESWIATGTAPGRIDASHRTNGVVDRARPLCPFGQVARWDGSGRS
                     DAASSFSCVAARLDLPR"
BASE COUNT          360 a          865 c          820 g          336 t
ORIGIN      
        1 gcaatccgaa cgccaaccgc gcgcggccgc tctgcgagtg gccgaagtgg ccgaagttca
       61 ccggcgcggc gggttccgag aacagcgccg ccagcttcac ctgcgtaccg tagccgccgg
      121 cctttagacc ggcccagtgt cacggcggcg tcagcgactc ggtgagctcg atcgaggtgc
      181 cccacgggtc ggtgaggagc gcgacccgca cccgggtccc gggtaactga cgcaccgggc
      241 cctcgacctt cacgccctgc gcctcgagac ggcgaatcgt cgcgtcgagg tcctggacgt
      301 cgaatccgat gtgatcgatg gcgcggcccc gcgtgggcaa ggggttcttg accaggacat
      361 tgcccggagg cgagaacgac aggttcacgc cgcccggcag atcgcccgtc tcgatcatcc
      421 gcggcttcga gacgcacgcc acacatggcc ggcgagtggg attgacgccg aacatccgca
      481 cgtaccagcg cttgatggcc ggcacgtccg gcggcgcgaa gtggacgtgg ttcatcgcca
      541 ccgccgtggg cagcgccggc tcgccgtaca cctccacgcg aatgccgtcg ggcgccagca
      601 ggtagacctc gttggggttc tcggtgggct cgatcggcag cccggcggcc ttccacgccg
      661 cgagcatctt cggcatgtcc tgcacgacga agccgatgtg gttgatgatg gagccggcgg
      721 gcgccggcgc gggctgctcc acctcctgca ggatcaggta ggtgccggga aactgaatca
      781 gctcgagcgg gccgtgcgtc acgatcgtgc cgcccatcac cgccgtccag aagcgcttgt
      841 gcgcgtcgac gtcggtgacg ttcaggtgca cgtggcccat gcgcagcccg gcctgattgg
      901 tttccacgag ctgcgcgccg gcgggcgccg ccacgagcgc cgcgacgacg gtccacgccg
      961 cgatccgcat acggcccggc atcttactat cagcggtgca gccgccggac ggcgaagccg
     1021 acgcccgcga accagtcctg cgcctcaccg tggacgcggt gccccacttc cacgtcgaac
     1081 tggccgtgcg caccggcgcc gaccgtgatg ccgccgtcca ccgagcacgc gcacccatgc
     1141 cctgcgaatg cgccgtccac ctcgccgtag gccccgaggc gcgcgccgag gctgtgatcg
     1201 agcgagaggc tgatctcgtg ttgccaggcc cgtccgccgt cggtgcggcc gtcggtcgcg
     1261 ttgaacgtgc ccgacagctc gaagccgtgc ggcagcccgc gcccgccggc caccttgaag
     1321 cccggatcgc gtgacaggta cggaatgacg gcgaggtcga ggccggcacg cgcggcgtcg
     1381 agcagcttca ccttgccgcc gacgtccacg tcgtggccgt ccaccgcaaa tcgcagctcg
     1441 acgcgggacg acactcccgc gcgcaggagc acttgcgccg tggtgtcccg cggatgctcg
     1501 tgatcggccc gcgccacgac gaggccggtt tccacctgca gcgtcccgcg ccccacgacg
     1561 gcgctcgact cgccgaagcc gggacgatcg gtgacgagct caggattcgc ccccgtgctc
     1621 tgcggcgcac cgaccgcggg cagcgccagg acgagcaccg cggcggccag ttcagcgcgg
     1681 cagatcgagc ctggccgcca cacagctgaa gctcgacgcg gcgtcgctgc ggccgctgcc
     1741 gtcccaccgc gccacctgcc cgaacgggca caacggacgc gcgcggtcga cgacgccgtt
     1801 ggtgcgatgc gacgcgtcga tgcgcccagg cgccgtgccg gtggcgatcc acgactccat
     1861 cgccgcgacc ttgtcgaagg tgtcggttcc cggcccgccg ttgcagtggt tcatgccagg
     1921 caccatgtag agctgcaccg acgtgccgac gcccgcgcca ccgttggtgg ccacgacctt
     1981 ctggaagaat tcgatcgtgt tgtacggggt gacctgcgga tcggaccagc cgtgatacag
     2041 caagagcttg ccgccgcgcg cgaagaacgt gcgcaagtcc gggttggtgg atccgagggc
     2101 gtcgtccgga tcggccgcga acgcgcgatc gaagtcgagc gccggatcga agcgcgatcc
     2161 ctcccaggcc ggatccttgt gcacgatgta cttgaacgcg tcggccgcaa acagaatcgg
     2221 acgcgggctg ccgagcacgg cccacccgag ttccgccccg ggcgcgagcc cgggcagcac
     2281 gcgcgccttc gtgccgggat gcgtggcgcc cgcatacatc gcctgcgccg attgcacctg
     2341 ggcgggcgtc aggcagctgg cgtcgtcctg cccggtgcac t
//
LOCUS       DASSYW010000765         2705 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1206269, whole genome shotgun sequence.
ACCESSION   DASSYW010000765 DASSYW010000000
VERSION     DASSYW010000765.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2705)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2705)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2705
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1206269"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..661)
                     /locus_tag="VFN38_12220"
     CDS             complement(<1..661)
                     /locus_tag="VFN38_12220"
                     /inference="COORDINATES: protein motif:HMM:NF013183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence/damage-inducible protein A"
                     /protein_id="HET9012577.1"
                     /translation="MRIEVVTIGDELLLGYTIDTNAAHLGRELAAIGVEIVRRTTCGD
                     SAESIASAVRDALDRSDGVITTGGLGPTSDDLTKQSIAALFGRGMVLDDVHLAWMRDR
                     WAKRWPERPMPAANIQQAMLPDGARKLTNNHGSAPGIFLEDERGRWVAMLPGVPREMR
                     GMLGDTLLPLVRERLGAVQRVVRSRTLRSTGVAESLAADRIAALSGGVGDVELAYLPN
                     VE"
     gene            complement(675..1364)
                     /locus_tag="VFN38_12225"
     CDS             complement(675..1364)
                     /locus_tag="VFN38_12225"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: protein motif:HMM:NF013250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HET9012578.1"
                     /translation="MNLPNAVTAARIAVTPLIAWLPLAPSSALRVTAFVLFVVAAVTD
                     YVDGRLARSRKQETDLGRLLDPLADKLLLVATILPMYLLMRPTAQSTEAWPLKALDNV
                     LPFRTPFGDVPLAWWVVAVVLGRELFMTIFRQAAARRGVVISAIGPAKWKTGFQSVWV
                     GSAYFWFFAATMAATHRWDTPAWNGFAYFNGIVGVTTMIGAIALTLYSLVLYLRTYGR
                     VFTGTPVRGRG"
     gene            complement(1381..2058)
                     /locus_tag="VFN38_12230"
     CDS             complement(1381..2058)
                     /locus_tag="VFN38_12230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase domain-containing protein"
                     /protein_id="HET9012579.1"
                     /translation="MSMINYASREINCKIVYYGSGLGGKTTNLEHVYGKVQPDTRGKL
                     ISLATETERTLFFDFLPVDLGTIRGFKTRFHLYTVPGQVYYNASRKLILKGVDGIVFV
                     ADSQVERMEANQEAMQNLYDNMAEYGYDLTKMPFVIQYNKRDLPNAAPVRELQAALNP
                     GWEVTEPARQRVTPDPSHAGENLVEQLPTGEWVEHAPYFEAVAVTGDGVFETLRAVSK
                     LVLKSLA"
     gene            complement(2074..2562)
                     /locus_tag="VFN38_12235"
     CDS             complement(2074..2562)
                     /locus_tag="VFN38_12235"
                     /inference="COORDINATES: protein motif:HMM:NF015232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="roadblock/LC7 domain-containing protein"
                     /protein_id="HET9012580.1"
                     /translation="MAVGSASWSFTEDDFGAITQSLQRFLHESNARCALLVDRSGQLV
                     ATVGEQPKFDPTAFATLTAADFSANDQLAKLIGETDFNSLFHQGEKESMYLADVARRV
                     ILVVLFDNRTTLGLVRLKMKQTVDELTKLFEQVFARPAQGQGGAPGLLSGADDEIDKL
                     FQ"
BASE COUNT          429 a          926 c          923 g          427 t
ORIGIN      
        1 cctccacgtt cgggagatac gccagctcca catcgccgac gccgccggac agggccgcga
       61 tccggtcggc agcgagcgac tcggccacgc cggtgctgcg cagcgtacgc gagcgcacca
      121 cccgctgcac ggccccgagc cgctcgcgca cgagcggcag cagcgtgtct ccgagcatgc
      181 cgcgcatctc gcgcggcacg ccgggcagca tcgcgaccca gcgtcctcgc tcgtcctcga
      241 ggaagatgcc cggtgcggag ccgtggttgt tggtcagctt gcgtgccccg tcgggcagca
      301 tcgcctgctg gatgttcgcg gcgggcatcg ggcgctccgg ccagcgcttc gcccagcggt
      361 cgcgcatcca cgcgaggtgc acgtcgtcga gcaccatgcc gcggccgaac agcgcggcga
      421 tggactgctt ggtgagatcg tcgctcgtgg ggccgaggcc gccggtcgtg atcacgccgt
      481 cggagcggtc gagcgcgtcg cgcaccgccg acgcgatgga ctcggcgctg tccccgcagg
      541 tcgtgcggcg cacgatctcc acgccgatgg cggcgagctc gcgtcccagg tgcgccgcat
      601 tggtgtcgat cgtgtagccg agcaggagct cgtcgccgat cgtgacgacc tcgatgcgca
      661 tgacgccgcg cggcctagcc gcgaccgcgc acgggcgtgc cggtgaagac gcggccgtac
      721 gtgcggaggt agagcaccag cgagtagagc gtgagggcga tggcgccgat catcgtcgtc
      781 accccgacga tgccgttgaa gtacgcgaag ccgttccacg ccggcgtgtc ccagcggtgc
      841 gtcgcggcca tcgtcgcggc gaagaaccag aagtacgccg agcccaccca caccgactgg
      901 aagccggtct tccatttcgc cggcccgatg gccgagatga cgacgcctcg ccgggctgcc
      961 gcctgacgga agatcgtcat gaacagctcg cggcccagca ccaccgccac cacccaccat
     1021 gcaagcggca cgtcgccgaa cggcgtgcgg aaggggagca cgttgtcgag cgccttcagc
     1081 ggccaggcct cggtgctctg ggccgtgggc cgcatcagca ggtacatggg caggatcgtc
     1141 gccacgagca gcagcttgtc ggcgagcgga tcgagcaggc gtcccaggtc ggtctcctgc
     1201 ttccgcgagc gggccagccg cccatccacg taatccgtca ccgccgcgac gacgaacagc
     1261 acgaacgccg tgacccggag cgccgacgac ggcgccagcg gcagccacgc gatgagcggc
     1321 gtgacggcga tgcgagcagc ggtgacggcg ttcgggaggt tcacacgatg ggcgagtggg
     1381 tcaggcgagc gacttgagca cgagcttgct cacggcgcgc agcgtctcga agacgccatc
     1441 cccggtcacg gcgaccgcct cgaaatatgg cgcatgttcc acccactcgc cggtgggaag
     1501 ctgctccacg aggttttcac ccgcgtgcga gggatcgggg gtgacgcgct ggcgggccgg
     1561 ctcggtcacc tcccacccgg ggttcagcgc cgcctggagc tcgcggaccg gcgccgcgtt
     1621 cgggagatcg cgtttgttgt actggatcac gaacggcatc ttcgtgaggt cgtacccgta
     1681 ctcggccatg ttgtcgtaca ggttctgcat ggcctcctgg ttcgcctcca tgcgctccac
     1741 ctgcgagtcg gcgacgaaca cgatcccgtc cacgcccttg aggatgagct tccggctggc
     1801 gttgtagtag acctggccgg ggacggtgta caggtggaac cgcgtcttga agccgcggat
     1861 cgtgccgagg tccaccggca ggaaatcgaa gaacagggtg cgctcggtct cggtggcgag
     1921 cgagatgagc ttgccgcgcg tgtccggctg caccttgccg tacacgtgct ccaggttcgt
     1981 cgtcttgccg ccaaggcccg agccgtaata cacgatcttg cagttgatct cgcgcgacgc
     2041 gtagttgatc atcgacatgg ctgtcgtctc ctcttactgg aacagcttgt cgatctcgtc
     2101 gtccgcaccg gacaacagcc cgggggcacc gccctgtccc tgcgcagggc gcgcgaagac
     2161 ctgctcgaac agcttggtca attcgtccac cgtctgcttc atcttgaggc gtaccaggcc
     2221 gagcgtcgtg cggttgtcga acagcacgac gaggatgacg cgccgcgcca cgtcggcgag
     2281 gtacatcgac tccttctcgc cctggtggaa gagcgagttg aagtccgtct cgccgatcag
     2341 cttggccagc tgatcgttcg cgctgaagtc cgccgccgtc agcgtcgcga aggcggtcgg
     2401 gtcgaacttc ggctgctcgc cgacggtcgc cacgagctgt ccgctgcggt cgacgagcag
     2461 ggcgcagcgc gcattgctct cgtgcaggaa ccgctgtagc gactgcgtga tcgcgccaaa
     2521 gtcgtcttcg gtgaacgacc agctcgcgct gcccactgcc atgaggatgg taacctagtc
     2581 gaggtgagct gccatgcgcc gcagcagatg ctggccacgc cggcgaagca ccggccgcgt
     2641 ctcccaattc acgtagtccc ggagcagacg cgccgtgtcc agccctggct gaccggccag
     2701 gaacc
//
LOCUS       DASSYW010000766         2528 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1554163, whole genome shotgun sequence.
ACCESSION   DASSYW010000766 DASSYW010000000
VERSION     DASSYW010000766.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2528)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2528)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2528
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1554163"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..743
                     /gene="carB"
                     /locus_tag="VFN38_12240"
     CDS             <1..743
                     /gene="carB"
                     /locus_tag="VFN38_12240"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683457.1"
                     /note="four CarB-CarA dimers form the carbamoyl phosphate
                     synthetase holoenzyme that catalyzes the production of
                     carbamoyl phosphate; CarB is responsible for the
                     amidotransferase activity; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="carbamoyl phosphate synthase large subunit"
                     /protein_id="HET9012581.1"
                     /translation="VYVLEVNPRASRTIPFVSKAIGVPLASYAARVMCGETLEQIGFT
                     EEIVPPFVSVKEAVFPFNKFAGTDPILGPEMRSTGEVMGISDSFGSAFAKAQLAASNG
                     LPLGGTILITVNDSDKATVTPIARRFHEMGFRLVATGGTYKHLRARGIPVTPVLKVHE
                     GRPNCMDMIVNGEAQLLVNTPFGKHSLRDDYTLRQAAIRHRVAYTTTLSAASAACDAI
                     LSLRSRAPTVRSLQEWQADIHGEIEVTS"
     gene            740..1354
                     /locus_tag="VFN38_12245"
     CDS             740..1354
                     /locus_tag="VFN38_12245"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020046524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0120225 - coenzyme A binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HET9012582.1"
                     /translation="MSVHKTAFVHASAFVDDGATIGAGTKVWHFCHVLGGAVIGERCS
                     LGQNVVVMNGTRIGTNVKIQNNVSVYEGVELEDDVFCGPSMVFTNVMNPRSHVSRKNE
                     YRRTLVRRGASIGANATIVCGTTLGEYAFIGAGSVVAKDVPAFALMVGVPARRIGWMC
                     QCGERLPDSGRGTCQACGSAYEPDATGIRLVATASAPSPLSPER"
     gene            1351..2412
                     /locus_tag="VFN38_12250"
     CDS             1351..2412
                     /locus_tag="VFN38_12250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HET9012583.1"
                     /translation="MTLHETPAGPPVRVALVGCGRISKNHVEAIAQVDDIELVAVADR
                     ELSRAEAVGAAVGVPAFGSLEQMLAAVPSDLVTICTPSGLHPQHGIVAARAGRHVLTE
                     KPMAISLEAADRLVQACDAAGVQLFVVKQNRLNPPIQLLKRAVDKGRFGRLFMANVTV
                     RWTRPQEYYDAEPWRGTWEFDGGALMNQASHYVDLMQWLVGPVESVMAKTATQARRIE
                     AEDSGVAVLKFRSGALGVLEVSVLTYPKNLEGSITLLGEKGSVKIGGTAVNKVEHWSF
                     ADYDDDDKLVESAATAPPSVYGFGHVPYYQNVVAVLRRRASADTDGRAGRKSLELILG
                     IYESAKTGREVPIPLRTRF"
BASE COUNT          395 a          864 c          879 g          390 t
ORIGIN      
        1 tggtgtacgt gctcgaggtg aacccgcgtg ccagccgcac catccccttc gtgtcgaagg
       61 cgatcggtgt gccgctcgcg tcctacgccg cgcgggtcat gtgcggcgag acgctggagc
      121 agatcgggtt caccgaggag atcgtgcccc cgttcgtgtc ggtgaaggag gcggtcttcc
      181 cgttcaacaa gttcgcgggg acggatccga tcctcgggcc ggagatgcgc tcgacgggcg
      241 aggtgatggg catctccgac tccttcggca gcgcgttcgc caaggcgcag ctggcggcgt
      301 cgaacggcct gccgctcggc ggcacgatcc tgatcaccgt gaacgacagc gacaaggcga
      361 cggtgacgcc gatcgcccgg cggttccacg agatggggtt ccgcctcgtg gcgaccgggg
      421 gcacgtacaa acacctgcgc gcgcggggga ttcccgtcac gcccgtcctc aaggtgcacg
      481 aggggcggcc gaactgcatg gacatgatcg tcaacgggga ggcgcagctc ctcgtcaaca
      541 cgccgttcgg caagcactcg ctccgggacg actatacgct gcggcaggcc gccatccggc
      601 atcgggtcgc ctacacgacc acgctgtccg ccgcgagcgc ggcgtgcgac gccatcctct
      661 cgctccggtc gcgggccccg acggtgcggt cgctccagga gtggcaggcg gacattcacg
      721 gtgagatcga ggtcacgtca tgagcgtgca caagacggcc ttcgtccacg cctcggcgtt
      781 cgtcgacgac ggcgcgacga tcggcgcggg cacgaaggtg tggcacttct gtcacgtgct
      841 gggcggcgcg gtgatcggcg aacggtgctc cctcgggcag aacgtcgtcg tcatgaacgg
      901 cacgcgcatc ggcaccaacg tgaagatcca gaacaacgtc tccgtctacg agggcgtcga
      961 gctggaggac gacgtgttct gcggcccgtc gatggtgttc acgaacgtga tgaacccgcg
     1021 cagccacgtc tcgcggaaga acgagtatcg ccgcaccctc gtccggcgcg gcgcgtcgat
     1081 cggggcgaac gcgacgatcg tctgcggcac cacgctcggc gaatacgcct tcatcggcgc
     1141 gggctccgtc gtggcgaagg acgtccccgc cttcgcgctc atggtgggcg tgccggcgcg
     1201 gcggatcggc tggatgtgcc agtgcggaga gcggctcccc gacagcggcc gcgggacgtg
     1261 ccaggcctgc ggttccgcct acgaacccga cgcgaccggc atccgcctcg tggcgaccgc
     1321 gtcggcccct tcaccgcttt ccccggaacg atgacgcttc acgaaacgcc tgccgggccg
     1381 ccagtgcggg tcgcgctcgt cggctgtgga cggatcagca agaaccacgt cgaggcgatc
     1441 gcgcaggtcg acgacatcga gctggtggcg gtggccgacc gcgagctctc gcgcgcggaa
     1501 gccgtcggag cggcggtcgg cgtcccggcc ttcggctcac tcgagcagat gctcgccgcc
     1561 gtgccgtcgg atctcgtcac gatctgcacg ccgtccgggc tgcatccgca gcacggcatc
     1621 gtggcggcgc gggcgggtcg ccacgtcctg acggagaagc cgatggccat ctccctcgag
     1681 gccgcggacc gcctcgtcca ggcctgcgat gccgccggcg tccagctgtt cgtcgtcaag
     1741 cagaaccggc tcaatccgcc gatccagctg ctgaagcgcg cagtggacaa gggacgcttc
     1801 ggccggctgt tcatggccaa cgtcaccgtg cgctggacgc ggccgcagga gtactacgac
     1861 gccgagccgt ggcgcgggac gtgggagttc gatggcgggg cgctgatgaa ccaggcgagc
     1921 cattacgtgg acctgatgca gtggctggtc gggccggtcg agagcgtgat ggccaagacc
     1981 gcgacgcagg cgcgccgcat cgaggccgag gattccggcg tggccgtgct caagttccgc
     2041 tccggcgcgc tgggcgtgct cgaggtgagc gtcctcacct accccaagaa cctcgagggc
     2101 tcgatcacgc tgctcgggga gaaggggtcg gtgaagatcg gcggcacggc cgtgaacaag
     2161 gtggagcact ggtcgttcgc cgactacgac gacgacgaca agctcgtcga gtcggcggcc
     2221 accgcgccgc cgagcgtgta tggcttcggt cacgtaccct attaccagaa cgtggttgcc
     2281 gtcctgcggc ggcgcgccag cgccgacacc gacgggcgcg cgggccgcaa gtcgctggag
     2341 ctgatcctcg gcatctacga atcggccaag accggccgcg aggtgccgat ccccctgcgc
     2401 acgcgtttct gatcgcgact atcattcagc gttcccgaat ccccttttct ttccagccga
     2461 accgtcccat ggccgtcccc cttctcgatc tccgcgccca gcacgccacc atccgcgacg
     2521 aaaccgtg
//
LOCUS       DASSYW010000767         4097 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_577637, whole genome shotgun sequence.
ACCESSION   DASSYW010000767 DASSYW010000000
VERSION     DASSYW010000767.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4097)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4097)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4097
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_577637"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1287
                     /locus_tag="VFN38_12255"
     CDS             <1..1287
                     /locus_tag="VFN38_12255"
                     /inference="COORDINATES: protein motif:HMM:NF015451.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HET9012584.1"
                     /translation="PKPEARSPKPASDSADVAVVGAGAAGLATAIFAARAAHGLRVVV
                     LDGARKIGAKILVSGGSRCNVTNRVVTERDFWGGSPRLIAHVLRAFPAGRTARFFEEL
                     GVALHEEEDGKLFPDSNSSRTVLDALLAEAARRDVTIESGARVVAIRHEAGGFAIERA
                     GAPALRARAVVLATGGRSLPKSGSDGFGYQLAAAFGHGCVATTPALAPLVLRGSAHAE
                     LSGVSLPAALTLRDGGKTLVRLEGALLWTHFGASGPVVLNLSRHWHRAVLGGAAVNVH
                     VGVLPGETFESIERWLLDEAAARPRAQVVTLLGQRLPNAVAVAWVAMAGVPRDATMAH
                     LTRDDRRRLAHDLHETPLHVEDSRGYAYAEVTAGGVPLDEIDTATMESRKQPGLYLVG
                     EILDVDGRLGGFNFQWAWSSGWVAGHALARARAEAR"
     gene            1284..1817
                     /locus_tag="VFN38_12260"
     CDS             1284..1817
                     /locus_tag="VFN38_12260"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HET9012585.1"
                     /translation="MRGHGHDSPTPAAWLVVNRALLPPSGRALDVACGRGRNSVWLAQ
                     QGFATTALDRDPAAVADLEARARQDGIPITARAVDLEAGAVDLGEALYDVVVVVHYLH
                     RPLFPALIAALAPGGVLVYETFTVAQAVRGRPTNPAFLLEPGELPRLVAPLEIRAARE
                     GDFEGRMVSSVVAVRPV"
     gene            complement(1828..2181)
                     /gene="ytxJ"
                     /locus_tag="VFN38_12265"
     CDS             complement(1828..2181)
                     /gene="ytxJ"
                     /locus_tag="VFN38_12265"
                     /inference="COORDINATES: protein motif:HMM:TIGR04019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bacillithiol system redox-active protein YtxJ"
                     /protein_id="HET9012586.1"
                     /translation="MRPDLKALRHLSDLDRLLEDSALRPVLLFKHSYACGTSAEALDE
                     LIAHLDERRRHDTDYAVVTVQTHRDISNAVSAKLGIRHETPQALLIRDRRVVWSASHF
                     RVTADAVTKALEQYT"
     gene            complement(2195..2761)
                     /gene="idi"
                     /locus_tag="VFN38_12270"
     CDS             complement(2195..2761)
                     /gene="idi"
                     /locus_tag="VFN38_12270"
                     /EC_number="5.3.3.2"
                     /inference="COORDINATES: protein motif:HMM:NF002995.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004452 - isopentenyl-diphosphate
                     delta-isomerase activity [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isopentenyl-diphosphate Delta-isomerase"
                     /protein_id="HET9012587.1"
                     /translation="MQEYVIVVDAADAELGREEKMRAHRTPVLHRAFSVFILDNRGAM
                     LLQRRAAGKYHSAGLWSNACCGHPRPGETAIDAATRRLREEMGIECALLPAGTVSYSV
                     DVGGGLREDEYNHVFVGLFTGDAKPDSAEVCAWRWMTPGTLGDTRAGAPHEFTPWFGM
                     VFDRLRQWLQGRPAQLPAAVLAAWQARP"
     gene            complement(2777..3814)
                     /locus_tag="VFN38_12275"
     CDS             complement(2777..3814)
                     /locus_tag="VFN38_12275"
                     /inference="COORDINATES: protein motif:HMM:NF013087.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008171 - O-methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HET9012588.1"
                     /translation="MSPAASALPPEASAAQLGFQIAWGYVGSSALHAALELGLPDRLA
                     AGPKPVAELARETGTNEDALYRVLRVLASLGMFEEQAPRTFAANLPAQLLRAQPGTAR
                     DILYFLTEPNHFRIHADLLYTLRTGQPAVEKVMGKPVFEVFASDPAFSKVFNDAMTSM
                     SALAIPAALEVFDFGDIRVLVDVAGGHGRVLTSILRKYPDMRGVLFDQEHVIAGAGPL
                     IAEAGVADRCQAVSGDFFAAVPAGGDAYIMKHIIHDWDDDRSLTILRNIHHVLAGVAN
                     GRVILLESVVQPGNVPDFGKLIDMEMLLIPGGRERTADEFAALFARAGFELTRIVPTA
                     SALSVIEAVAR"
     gene            complement(3854..>4097)
                     /locus_tag="VFN38_12280"
     CDS             complement(3854..>4097)
                     /locus_tag="VFN38_12280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012589.1"
                     /translation="VIAAVPVLLEPGTPPAVALIAASPREINRWRLQIVSREKTLLYD
                     ELLDTPTELLKARGADGADRLFLDRASLLALRRRPG"
BASE COUNT          583 a         1425 c         1477 g          612 t
ORIGIN      
        1 ccgaagcccg aagcccgaag cccgaagcct gcgagcgaca gcgccgacgt cgcagtagtc
       61 ggcgctggcg ctgcgggatt ggcgaccgcc atctttgccg cccgcgctgc gcacggactg
      121 cgcgtggtcg tgctcgacgg cgcgcgaaag atcggcgcca agatcctggt cagcggcggc
      181 tcgcgctgca acgtgaccaa ccgcgtcgtg accgagcgcg atttctgggg tggttccccc
      241 cgcctcatcg cgcacgtgct gcgcgcgttt ccggccggcc ggaccgcgcg cttcttcgaa
      301 gagctgggcg tcgcgcttca cgaagaggaa gatgggaagc tgtttcccga ctcgaacagc
      361 tcgcgcacgg tgctcgacgc gctgctcgcc gaggcagcgc gccgtgatgt gacgatcgag
      421 agcggcgcac gcgtggtggc gattcgccac gaggcgggcg gcttcgcgat cgagcgggcc
      481 ggcgcgccgg ccctgcgtgc gcgcgcggtt gtgctggcca ccggcggccg gtcgttgccg
      541 aagagcggca gcgacggctt cggctaccag ctggccgccg ccttcggcca cggctgcgtg
      601 gccaccacgc ccgcgctggc gccgctcgtg ctgcgcggct ccgcgcacgc ggagctctcg
      661 ggcgtctcgc tgcccgcggc gctgacactg cgcgacggcg gcaagacgct cgtgcggctc
      721 gaaggcgcgc tgctgtggac ccatttcggc gccagcggcc cggtggtcct gaacctgtcg
      781 cggcattggc accgcgccgt gctcggcggc gccgcggtca acgtgcacgt gggcgtgctc
      841 cctggcgaga cgttcgaatc gatcgagcgc tggctgctcg acgaagccgc ggcacgcccg
      901 cgcgcgcagg tcgtgacctt gctcggacag cggctgccga acgcggtggc ggttgcgtgg
      961 gtggcgatgg ccggggtgcc gcgcgacgcg accatggccc acctgacgcg cgacgatcgg
     1021 cggcgtctcg cgcatgacct gcacgagacg ccgcttcacg tcgaagacag ccgcggctac
     1081 gcctatgccg aggtgacggc cggcggcgtg ccgctcgacg agatcgacac cgccacgatg
     1141 gagtcgcgca agcagccggg gctgtatctg gtcggcgaga tcctcgacgt ggacgggcgc
     1201 ctcggcgggt tcaactttca gtgggcctgg tcgtcgggct gggtcgccgg ccacgcgctg
     1261 gctcgtgcgc gtgcggaggc gcgatgaggg gtcacggtca cgactcgccg acgccggccg
     1321 cgtggctggt cgtgaatcgc gcgctcctgc cgccgtccgg ccgcgcgctc gacgtcgcct
     1381 gtggccgggg gcgcaactcg gtgtggctgg cgcaacaggg cttcgcgacc acggcgctcg
     1441 atcgcgaccc ggccgcggtg gccgatctcg aggcccgcgc gcggcaggac gggatcccga
     1501 tcacggcgcg agcggtggac ctcgaggccg gtgccgtcga tctcggcgaa gcgctgtacg
     1561 acgtcgtcgt ggtcgtgcac tacctgcatc ggccgctgtt tcccgccctc atcgccgctc
     1621 tggcgccggg cggcgtgctc gtctacgaaa cgttcaccgt cgcgcaggcg gtgcgcggcc
     1681 gtccgacgaa cccggcgttc ctgctggagc ctggcgagct gccgcggctg gtcgcgccgc
     1741 tcgagattcg agccgcacgc gaaggcgatt tcgaagggcg gatggtgtcg agcgtggtgg
     1801 cggtgcggcc ggtctgaaga ccggcggcta cgtgtactgc tcgagcgcct tcgtcacggc
     1861 gtcggcggtg acccggaagt gcgaagcgct ccagacgacg cgccggtcgc gaatgagcag
     1921 cgcctgcggc gtttcgtggc ggatgccgag cttcgcgctg accgcgttcg agatgtcgcg
     1981 gtgcgtctgc accgtcacca ccgcgtagtc ggtgtcgtgg cggcgccgct cgtccaggtg
     2041 cgcgatcaac tcgtccagcg cttcggcgct ggtgccgcac gcgtagctgt gcttgaagag
     2101 gagcaccggg cgaagcgcgg aatcctcgag cagccggtcg agatcgctga gatgccgcag
     2161 cgctttgaga tcgggacgca tcagctcgat cgtatcaggg ccgggcctgc catgcggcca
     2221 gcacggcggc aggcagctgc gcaggccttc cctgcagcca ctgccgcagc cgatcgaaca
     2281 ccatgccgaa ccacggcgtg aactcgtgcg gcgcgccggc ccgggtgtcg cccagggtgc
     2341 ccggcgtcat ccagcgccat gcgcacacct ccgcggagtc gggcttcgcg tcgccggtga
     2401 agagtcccac gaagacatgg ttgtactcgt cttcgcgaag cccgccgccg acgtcaacgg
     2461 aatacgagac ggtgccggcc gggagcagcg cgcattcgat gcccatctcc tcccgcagcc
     2521 ggcgcgtggc cgcgtcgatg gcggtctcgc cgggccgcgg gtgaccgcag cacgcgttcg
     2581 accacagccc tgccgagtgg tactttccgg ccgctcggcg ctgcagcagc atcgcgccgc
     2641 gattgtcgag aatgaacacc gagaacgcgc ggtgcagtac cggagtgcgg tgcgcccgca
     2701 tcttctcctc gcgccccagc tcggcgtccg ccgcgtcgac gacgatcacg tactcctgca
     2761 tgtgcaggcc cgggacctag cgcgccacgg cctcgatgac tgagagcgca gaggccgtcg
     2821 gcacgatacg cgtcaactcg aaccccgcgc gcgcgaacaa agccgcgaac tcgtcggccg
     2881 tgcgctcgcg tcctccggga atgagcagca tctccatgtc gatcagcttg ccgaaatcgg
     2941 gcacgttgcc aggctggacg accgattcga gcagaatcac gcgcccgttg gcgacgccgg
     3001 cgagtacgtg gtggatgttc cggaggatcg tcaacgatcg gtcatcgtcc cagtcgtgga
     3061 tgatgtgctt catgatgtac gcgtcgccgc cggcgggcac ggcggcgaag aagtcgcccg
     3121 ataccgcctg gcaccgatcg gccacgcccg cttccgcaat cagcgggccg gcgccggcaa
     3181 tcacgtgctc ctgatcgaag agcacgccgc gcatgtccgg atacttccgc aggatcgacg
     3241 tcagcacacg gccatggccg ccggccacgt caaccagcac acggatgtcg ccgaagtcga
     3301 agacctcgag cgccgcgggg atcgccagcg cgctcatcga cgtcatggcg tcgttgaaca
     3361 ccttgctgaa ggccggatcg gacgcgaaca cctcgaatac gggcttgccc atcaccttct
     3421 cgacggcggg ctgacccgtg cgcagcgtgt acaagaggtc ggcgtgaatg cggaagtggt
     3481 tcggctcggt gaggaagtag aggatgtcgc gcgccgtgcc gggctgcgct cgcagcagct
     3541 gcgccggcag gttcgcggca aaggtgcggg gcgcctgctc ttcgaacatg cccaggctgg
     3601 cgagcacgcg cagcacgcga tacagcgcat cctcgttcgt ccccgtctcc cgcgccagtt
     3661 ccgcgacggg tttcggtccg gccgccagcc ggtcgggcag cccgagttcg agcgccgcgt
     3721 gcagcgcgct cgagcccaca tacccccacg cgatctggaa cccgagttgc gcggcgctgg
     3781 cttccggtgg cagggcagat gcggcaggag acatgggcgc caatcatacc gccgccggat
     3841 cgcctcggga tggtcagccg ggtcgccggc gaagcgcgag caggctcgcg cggtcgagga
     3901 acaggcggtc cgcgccgtcg gcgccgcgcg ccttcaggag ctcggtcggc gtgtccagca
     3961 gttcgtcgta gagcagcgtc ttctcccgcg acacgatctg cagccgccag cggttgatct
     4021 cacgcgggct cgcggcgatc agcgccacgg ccggcggcgt gcccggttcg agcaggaccg
     4081 ggaccgccgc gatcacc
//
LOCUS       DASSYW010000768         3316 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_469354, whole genome shotgun sequence.
ACCESSION   DASSYW010000768 DASSYW010000000
VERSION     DASSYW010000768.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3316)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3316)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3316
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_469354"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            277..732
                     /locus_tag="VFN38_12285"
     CDS             277..732
                     /locus_tag="VFN38_12285"
                     /inference="COORDINATES: protein motif:HMM:NF025013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4142 domain-containing protein"
                     /protein_id="HET9012590.1"
                     /translation="MPDANTAAILLTSHNADLAAARIATTRARHRDVKLLARNLVTDH
                     SSMSATLSRLVDDLDLTPREDDVSRLLRDQSAARRDTLRTLSGQAFDSAYVESEVRFH
                     QEMLVAIDRVFLPSVRSARLREYVTMMRPAISAHLALARQVRDAIARAR"
     gene            729..1979
                     /locus_tag="VFN38_12290"
     CDS             729..1979
                     /locus_tag="VFN38_12290"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HET9012591.1"
                     /translation="MTAGTGAPRHDAYAALRHRDFRWYVVSLFAMTLASQLQAVVVGW
                     QVYAITHDPLSLGLMGLAEALPFIAVALPAGYAADRWNRRTITVSALAVLVACALGLL
                     TFSATPGLFGRAGVAPIYAIIFVSGIARSMLQPARQALGAEIIPRAMYENAIAWRSSS
                     WQTAAVVGPAAGGLLYGFAGPVASYAVGAVLMTFALLGFLIVRYRPAERELDGVPILI
                     GLASGLRFVWREPVILAALSLDLFSVFLGGAEALLPVFASEILKVGPQGLGILRAAPA
                     AGAVLMGVYLAHRGPIERAGRAMLFAVATFALAIIGFGLSKSFLLSGALLLVSGMADN
                     VSVVIRSTLLQLLTPPEMLGRVSAVNSVFIGSSNELGAFESGVAARLLGAVPAVVLGG
                     TASLLVVAITARLVPRLRQLGRIS"
     gene            2227..>3316
                     /locus_tag="VFN38_12295"
     CDS             2227..>3316
                     /locus_tag="VFN38_12295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine synthetase III"
                     /protein_id="HET9012592.1"
                     /translation="MTAPSHPTRKSTLRDLVARVPRAPLSGNGDGLGHVPTSAYFGIN
                     TFGARQMRDKLPKEVSKSLAASIRHGKKLDLEVAPVVAQVIKEWAMSRGVTHFTHWFQ
                     PQTGLTAEKHDAFLSFDDNKQPMEKFTSAQLIQSEPDASSFPSGGLRATWEARGYTAW
                     NPASPVFIVESAETRTLCIPSVFIGYNGEALDEMTPLLRSSDVLSEKSIALLELLGDT
                     GVQRVYTTLGAEQEYFLIDRAHFAERPDLVMAGRSLVGAPPPRGQQLEDHYFGGIPER
                     IQACISEVEHELYKLGVPIMTRHNEVAPSQYEMAPLFEETDIAVDHNQLVMATLRKVA
                     LRHDLQAILHEKPFAGINGSGKHCNWSLS"
BASE COUNT          447 a         1207 c         1132 g          530 t
ORIGIN      
        1 accgcggtcg gaccccgtcg aggccggctg ggacgaaccc ctcgggcacc cctgctcctg
       61 ccccgtggcg tcgtccacgt agccgcggag agcaccagcc gataacgtgc gctggtgacc
      121 gcccatccca ccgcccaacg tccgatgcgc tccccgctcc gctccgggtg gcgaaccctc
      181 gccctcccgc tcgccgccgc gctcgcgtgc ggaggtgggc gcgcatccgc tccagcggcg
      241 cctccgccgg cgcccgcggc cacgcggttc tcgcgcgtgc ccgacgccaa caccgcggcc
      301 atcctgctca cgtcgcacaa cgccgacctc gcggccgccc gcatcgcgac gacgcgcgct
      361 cggcaccgtg acgtgaagct gctggcgcgc aacctggtca ccgaccattc cagcatgagc
      421 gccaccctgt cgcggctggt ggacgacctc gacctcacgc cgcgcgagga cgacgtgagc
      481 cgcctgctgc gcgaccagag cgccgcacgg cgcgacaccc tgcggaccct gtcggggcag
      541 gcgttcgatt cggcctacgt ggagagcgag gtgcgcttcc accaggagat gctcgtggcg
      601 atcgaccgcg tctttctccc gagcgtgcgc agtgcccgcc tgagggagta cgtgacgatg
      661 atgcgtccgg cgatctcggc gcacctcgcc ctcgcccggc aggtgcggga cgccatcgcc
      721 cgcgcgcggt gacggctggt accggcgcgc cgaggcacga cgcctacgcc gccctccgcc
      781 accgcgactt ccgctggtac gtggtgagcc tcttcgccat gacgctcgcc tcccagctcc
      841 aggcggtcgt ggtgggatgg caggtgtacg cgatcaccca cgaccccctc tcgctcggcc
      901 tgatggggct ggccgaggcg ctccccttca tcgccgtcgc gctgccggcg ggatatgcgg
      961 ccgaccgatg gaaccggcgc acgatcacgg tgagcgcgct ggccgtgctc gtcgcgtgcg
     1021 cgctgggcct gctgacgttc agcgccacac cggggctgtt cgggcgcgcc ggggtggcgc
     1081 cgatctacgc gatcatcttc gtgagcggca tcgcccgcag catgctgcag ccggcgcggc
     1141 aggcgctggg cgcggagatc atcccgcgcg cgatgtacga gaacgccatc gcgtggcgga
     1201 gcagctcgtg gcagaccgcg gcggtcgtcg gccccgccgc gggcgggctg ctgtacggct
     1261 tcgcgggacc ggtcgcgtcg tacgccgtcg gcgccgtgct gatgaccttc gccctcctcg
     1321 gcttcctgat cgtgcgctac cggccggccg agcgggagct cgacggggtg ccgatcctca
     1381 tcgggctcgc ttccggcctc cgcttcgtgt ggcgggagcc ggtgatcctc gccgcgctct
     1441 cgctcgacct gttctccgtg ttcctgggcg gtgccgaggc gctgctgccc gtgttcgcgt
     1501 cggagatcct gaaggtcggg ccgcagggac tgggcattct tcgtgcggca cccgcggccg
     1561 gggcggtgtt gatgggcgtg tatctcgccc atcgcggtcc gatcgagcgg gcgggacggg
     1621 cgatgctctt cgcggtggcg accttcgccc tggcgatcat cggcttcggc ctctcgaaga
     1681 gcttcctgct ctcgggggcg ctgctgctgg tgagcggcat ggcggacaac gtgagcgtgg
     1741 tgatccggtc caccctgctg cagctcctca cgccgccgga gatgctgggc cgggtgtcgg
     1801 cggtgaactc ggtgttcatc ggcagctcga acgagctcgg cgccttcgag tcgggggtgg
     1861 cggcgcggct gctgggcgcg gtgccggcgg tggtgctggg agggacggcg tcgctgctcg
     1921 tggtggcgat caccgcccgc ctggtgccgc ggcttcgaca gctggggcgg atctcatgag
     1981 ctgtgcggct cccgcacacg tcgtcggagg gctggcttgc ctccctcttt tcgccgacac
     2041 gggcaccaac cgctggaacg cgggcagaac gtgcagtttc agcactattt tgccggactt
     2101 cttgtagttt gggcgctcat tttgctagat tgacatgcag atcgtgcaga ttttgcacga
     2161 tttgccagtt cagcccgaca attgccgcct ctccgggcgg ctgagacctc agccccgctt
     2221 cgcgccatga ccgccccctc gcatcccacg cgcaagtcga cgctccgcga cctcgtcgcg
     2281 cgcgtccccc gtgccccgct ctccggcaac ggcgatggcc tggggcacgt ccccacctcc
     2341 gcctacttcg ggatcaacac gttcggcgcg cgccagatgc gcgacaagct gccgaaggag
     2401 gtctccaaga gcctcgcggc ctccatccgc cacgggaaga agctcgacct cgaggtggcg
     2461 ccggtggtcg cccaggtgat caaggagtgg gcgatgagcc ggggcgtcac ccacttcacc
     2521 cactggttcc agccacagac ggggctcacg gcggagaagc acgacgcctt cctgagcttc
     2581 gacgacaaca agcagccgat ggagaagttc acgagcgccc agctcatcca gagcgagccg
     2641 gacgcgtcga gcttccccag cggcgggctg cgggccacct gggaagcccg cggctacacc
     2701 gcgtggaacc cggcgagccc ggtgttcatc gtcgagtcgg ccgagacgcg caccctgtgc
     2761 atcccgtcgg tgttcatcgg ctacaacggc gaggccctcg acgagatgac gccgctgctc
     2821 cgcagctccg acgtcctctc cgagaagtcc atcgcgctgc tggagctgct cggcgacacc
     2881 ggcgtccagc gcgtgtacac gacgctgggc gccgagcagg agtacttcct catcgatcgc
     2941 gcccacttcg cggagcgccc cgacctcgtg atggccggcc gctcgctcgt gggtgcgccc
     3001 ccgccgcgcg gccagcagct cgaggaccac tacttcggcg ggatccccga gcgcatccag
     3061 gcgtgcatca gcgaggtgga gcacgagctc tacaagctgg gcgtgccgat catgacgcgg
     3121 cacaacgaag tcgccccgtc gcagtacgag atggcgccgc tgttcgagga gaccgacatc
     3181 gcggtggacc acaaccagct cgtcatggcg acgctgcgga aggtggcgct ccggcatgac
     3241 ctccaggcga tcctccacga gaagcccttc gccggcatca atgggtccgg caagcactgc
     3301 aactggtcgc tctcca
//
LOCUS       DASSYW010000769         2020 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1214397, whole genome shotgun sequence.
ACCESSION   DASSYW010000769 DASSYW010000000
VERSION     DASSYW010000769.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2020)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2020)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2020
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1214397"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1001
                     /locus_tag="VFN38_12300"
     CDS             <1..1001
                     /locus_tag="VFN38_12300"
                     /EC_number="4.1.99.1"
                     /inference="COORDINATES: protein motif:HMM:NF009709.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tryptophanase"
                     /protein_id="HET9012593.1"
                     /translation="IEVEDAEARDFVIEEGRHPSAKHPFKGNIDLAALEALLDRDGDR
                     VPLVMVTVTNNSGGGQPVSLANLCGVRALCDRYRKPFFLDACRFAENAWLLKTREAGQ
                     ADRTPLAIARELFSLADGCTMSAKKDGMSNIGGFLAMNDDAWAEAARNLLILTEGFPT
                     YGGLAGYDLEAIAVGLREALDEDYLRYRIRSIEYLGEKLLAAGIPIVTPTGGHALYLD
                     AKRWLAHIPQHEYPAWALSCVLYVEGGIRAAEIGSVMFGRQPDGSERPADLELVRLAF
                     PRRVYTQSHVDYVAEVLLHVNTMAHRIRGVRMLDAPEVLRHFTASFGPAADALVAS"
     gene            1040..>2020
                     /locus_tag="VFN38_12305"
     CDS             1040..>2020
                     /locus_tag="VFN38_12305"
                     /inference="COORDINATES: protein motif:HMM:NF024994.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HET9012594.1"
                     /translation="MRERVLSLDPILRPNSIAVVGASRRPGTIGHQIVANLVEHGFTG
                     PVYPVNRSARSINAIHAWPAVSAIPEPVDVAVIAVPKELVCDVAEECGAAGVRGLMVI
                     SSGFREVGAEGLEREHRLVAIARRHRMRMIGPNCMGVINSDAAYSMNATFAPVMPDFG
                     PAAFVSQSGALGVNVLDYAKELGIGIAQFVSMGNKADVSGNDLLLHWEDDPAIGVILM
                     YVENFGNARNFLEIAPRVARKKPIIVLKAGRSAVGARAASSHTGALAASDDSSEALLT
                     QAGVLRAGSIEELFDMAVAFTARRARRIPASRRVGVVGNSGGPGVLAADAL"
BASE COUNT          299 a          717 c          713 g          291 t
ORIGIN      
        1 acatcgaggt ggaagacgcc gaggcgcgcg atttcgtgat cgaggaggga cgtcacccgt
       61 cggcgaaaca cccgttcaag ggcaatatcg acctggcggc cctcgaggcg ctcctcgatc
      121 gcgacggcga ccgcgtgccg ctcgtcatgg tgacggtgac caacaactcc ggcggcgggc
      181 agccggtgtc gctcgccaac ctgtgtggcg tgcgggcgct gtgcgatcgc taccgcaagc
      241 cgttcttcct cgacgcctgc cgcttcgccg agaacgcgtg gctgctcaag acgcgggagg
      301 cggggcaggc ggacaggacg ccgctcgcca tcgcgcgcga gctgttctcc ctggcggacg
      361 gctgcacgat gagcgcgaag aaggatggca tgtcgaacat cggcggcttc ctggcgatga
      421 acgacgacgc gtgggccgag gcggccagga acctgctgat cctcaccgag ggattcccga
      481 cctacggcgg cctggccggc tacgacctcg aagccatcgc cgtggggctg cgggaggcgc
      541 tggacgagga ctacctgcgc taccgcatcc gcagcatcga gtacctcggc gagaagctgc
      601 ttgcggcggg gatcccgatc gtcacaccga cggggggcca tgcgctctat ctcgatgcca
      661 agcggtggct cgcgcacatc ccgcagcacg agtatccggc gtgggcactg tcgtgcgtgc
      721 tgtacgtcga gggcggcatc cgcgcggccg agatcggctc ggtgatgttc ggccgccagc
      781 ccgacggctc cgagcggccg gccgacctgg agctcgtgcg gctggccttc ccgcgccgcg
      841 tgtacaccca gagccacgtg gactacgtgg ccgaggtgct gctgcacgtg aacaccatgg
      901 cgcaccgcat ccgcggggtg aggatgctcg acgcgccgga ggtgctgcgg cacttcacgg
      961 cgagcttcgg gcccgcggcc gacgcgctcg tcgcgagctg accggcacca cccgacttcc
     1021 tccccccacc cacgaccaga tgcgcgagcg ggtcctctcc ctcgacccga tcctccgccc
     1081 gaacagcatc gcggtcgtgg gagcctcgcg ccggcccggc accatcggac accagatcgt
     1141 cgccaacctc gtggagcacg gcttcaccgg ccccgtgtac ccggtgaacc gctcggcgcg
     1201 ctccatcaac gccatccacg cgtggcccgc ggtgagcgcg atccccgagc cggtggacgt
     1261 ggccgtcatc gccgtgccga aggagctcgt ctgcgacgtg gcggaggagt gcggcgccgc
     1321 cggggtgcgc ggcctcatgg tcatctcgtc cggcttccgc gaagtgggcg ccgaagggct
     1381 cgagcgcgag caccggctcg tggcgatcgc gcggcgccat cgcatgcgga tgatcgggcc
     1441 gaactgcatg ggggtgatca acagcgacgc cgcgtactcg atgaacgcca ccttcgcgcc
     1501 ggtgatgccc gacttcgggc ccgccgcgtt cgtctcgcag tcgggcgcgc tcggcgtgaa
     1561 cgtgctcgac tacgccaagg agctcggcat cgggatcgca cagttcgtct cgatggggaa
     1621 caaggcggac gtgagcggca acgacctcct gctgcactgg gaggacgatc ccgccatcgg
     1681 cgtgatcctg atgtacgtgg agaacttcgg caacgcgcgc aacttcctcg agatcgcccc
     1741 gcgcgtggcg cgcaagaagc ccatcatcgt gctcaaggcg ggacgctccg ccgtcggcgc
     1801 gcgggccgcg tcgtcgcaca ccggcgcgct ggccgccagc gacgattcca gcgaggcgct
     1861 gctcacccag gcgggagtgc tccgcgccgg ctccatcgag gagctgttcg acatggcggt
     1921 cgccttcacg gcacgccgcg cgcggcgcat ccccgcctcg cgccgcgtcg gcgtggtggg
     1981 caactcgggc gggcccggcg tcctggccgc cgacgcgctg
//
LOCUS       DASSYW010000770         2241 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_319862, whole genome shotgun sequence.
ACCESSION   DASSYW010000770 DASSYW010000000
VERSION     DASSYW010000770.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2241)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2241)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2241
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_319862"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..440
                     /locus_tag="VFN38_12310"
     CDS             <1..440
                     /locus_tag="VFN38_12310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012595.1"
                     /translation="ARRQLWDLIDEFKRGGRTILLTTHYMEEAERLSDRVAVMDRGKV
                     IARGTPSELIASIGGDHLIELEAGDGVARVELAALQRIDGVREARAENGLVRIQAADL
                     HRVLPALLDELGRQAVPLFELRTHSATLEDVFVSLTGRQLRDV"
     gene            433..1545
                     /locus_tag="VFN38_12315"
     CDS             433..1545
                     /locus_tag="VFN38_12315"
                     /inference="COORDINATES: protein motif:HMM:NF024110.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HET9012596.1"
                     /translation="MSDVVREAVRREPMMHDATAARPDWTRRSLVQLTLVRFKEFLRE
                     PEAVFWTFAFPVILAFGLGIAFRNKPADVLTIAVVRGPAGGDSLAAALAAAPGLRVKA
                     MSADSAAHALRTGEVALVAAAGGAGSVEYRFDDTRPEARSARAATDDALQRAAGRRDP
                     VAVTESHVSEKGSRYIDFVVPGLLGMNIMGGGIWGLGFAIVEARRKNLLKRLVSTPMR
                     RSEYLASFLLSRFVFLILEVAVLVGSAALFFDVPVRGSLVQLFVVCLLAALAFGGLGL
                     LIASRARTMEGVSGLMNLTMMPMWVLSGVFFSSANFPRVAQPFIKALPLTATNDALRA
                     TMLPGAGWGAVAPQLAVIVVWLVGTFALALRLFRWR"
     gene            1567..>2241
                     /locus_tag="VFN38_12320"
     CDS             1567..>2241
                     /locus_tag="VFN38_12320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016830 - carbon-carbon lyase activity
                     [Evidence IEA];
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-dependent decarboxylase"
                     /protein_id="HET9012597.1"
                     /translation="MSDSPVLGDLPTAELHEHGARLLEWIAAYLEHPERHRVVSPLAP
                     GDVARSLPAAPPAAAEPLERIFADFESRILPGITHWNHPGFFAYFSISSSIPGILAEL
                     LVAALDVNAMLWKTSPAATELEQLTMDWLRQLLGLGGGWFGIINDTASISTLLALAAA
                     REAKPELAIRARGMAGRSDLPVLRVYCSEHAHSSVDKGALTLGLGLDNVVKIPADDAF
                     RMRPDAL"
BASE COUNT          270 a          776 c          833 g          362 t
ORIGIN      
        1 aggcgcggcg tcagctctgg gacctcatcg acgagttcaa gcgcggggga cgcacgatcc
       61 tgctcacgac ccattacatg gaggaagccg aacgcttgag cgaccgcgtc gccgtgatgg
      121 atcgcggcaa ggtgatcgcc cgcgggacgc cgtcggagct gatcgcgtcg atcggcggcg
      181 accatctcat cgagctggag gccggcgacg gggtggcgcg ggtcgagctc gccgccctgc
      241 agcgtatcga cggcgtacgc gaggcacggg cggaaaacgg cctcgtcagg atccaggccg
      301 ccgatcttca ccgcgtcctg ccggcgcttc tcgacgagct gggccgccag gccgttcccc
      361 tgttcgagtt gcgcacccat tcggcgacgc tcgaggacgt gttcgtgtcg ctcaccggac
      421 ggcagctgcg cgatgtctga cgtcgtgcgt gaggcggtgc gccgcgagcc gatgatgcac
      481 gacgccacgg cggcgcgtcc ggactggacg cggcggtcgc tggtgcagct caccctcgtg
      541 cgcttcaagg agttcctccg agagcccgag gcggtgttct ggaccttcgc ctttccggtg
      601 atcctcgcct tcgggctggg gatcgccttc cggaacaagc cggccgacgt gctgacgatc
      661 gccgtcgtgc gcggcccggc ggggggcgac tcgctggcgg cggcgctcgc cgccgcgccg
      721 ggcctgcggg tgaaggcgat gagcgcggac tccgcggcgc acgcgctgcg cacgggcgag
      781 gtggcgctcg tcgccgcggc cggcggtgcc ggcagcgtgg agtaccggtt cgacgacacg
      841 cgtccggagg cgcggtcggc gcgcgcggca accgacgacg cgctccagcg cgcggcgggg
      901 cggcgcgatc cggtggccgt caccgagtcg cacgtgagcg agaagggctc gcgctacatc
      961 gacttcgtgg tgccggggct gctcggcatg aacatcatgg ggggcggcat ctgggggctg
     1021 ggcttcgcca tcgtcgaggc gcggcgcaag aacctgctca agcggctggt gtccacgccg
     1081 atgcgccgca gcgagtacct cgcgtcgttc ctcctgtcgc gcttcgtctt cctgatcctc
     1141 gaggtcgcgg tgctggtggg gagcgcggcg ctgttcttcg acgtgccggt gcggggctcg
     1201 ctcgtgcagc tgttcgtcgt ctgcctcctc gcggcgctgg cgttcggcgg gctggggctg
     1261 ctcatcgcgt cgcgcgcccg gacgatggaa ggggtgtcgg ggctgatgaa cctgacgatg
     1321 atgccgatgt gggtgctgtc gggggtgttc ttctcgtcgg cgaacttccc gcgggtggcg
     1381 caaccgttca tcaaggcgct gccgctcacc gcgacgaacg acgccctgcg cgcgacgatg
     1441 ctgccgggtg cggggtgggg agcggtggcg ccgcagctcg cggtgatcgt ggtctggctg
     1501 gtggggacct tcgcgctggc gttgcggctg ttccggtggc ggtgagcgaa ccgtgtgcgg
     1561 ccggcgatga gcgatagtcc cgtcctcggc gacctcccca ccgccgagct gcacgagcat
     1621 ggcgcgcggc tgctcgagtg gatcgcggcg tacctcgagc atcccgagcg ccaccgcgtc
     1681 gtgtcgccgc tggcgccggg cgacgtcgcg cgctcgctcc ccgccgcgcc cccggcggcc
     1741 gccgagccgc tcgagcggat cttcgccgac ttcgagagcc gcatcctccc cggcatcacg
     1801 cactggaacc accccgggtt cttcgcctac ttctccatct cgtcgtccat ccccggcatt
     1861 ctcgccgagc tgctcgtcgc cgcgctcgac gtgaacgcga tgctgtggaa gacgtcgccc
     1921 gcggcgacgg agctcgagca gctcaccatg gactggctgc gccagctgct cggactgggg
     1981 ggcggctggt tcggcatcat caacgacacc gcatccatct ccacgctgct cgccctggcc
     2041 gcggcgcgcg aggcgaagcc ggagctggcg atccgcgcgc gcggcatggc cggccggtcc
     2101 gacctgcccg tgctgcgcgt gtactgctcc gagcacgcgc actcgtcggt ggacaagggc
     2161 gccctgaccc tcgggctggg cctcgacaac gtggtgaaga tccccgccga cgacgcgttc
     2221 cggatgcgtc ccgacgcgct c
//
LOCUS       DASSYW010000771         2886 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1628020, whole genome shotgun sequence.
ACCESSION   DASSYW010000771 DASSYW010000000
VERSION     DASSYW010000771.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2886)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2886)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2886
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1628020"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..316)
                     /locus_tag="VFN38_12325"
     CDS             complement(<1..316)
                     /locus_tag="VFN38_12325"
                     /inference="COORDINATES: protein motif:HMM:TIGR01470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HET9012598.1"
                     /translation="MSGFPILVEGSAIDVLVVGGGTVASRKAAVLIEAGARVRVVAPK
                     VSDALRALADAGRVVVAERRYARADIGDAHLVIAATDDRAVNAAVTADAHAAARLVNV
                     ADM"
     gene            complement(313..1122)
                     /gene="ccsA"
                     /locus_tag="VFN38_12330"
     CDS             complement(313..1122)
                     /gene="ccsA"
                     /locus_tag="VFN38_12330"
                     /inference="COORDINATES: protein motif:HMM:NF013725.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HET9012599.1"
                     /translation="MTAIAHFVAITCYIGAAALAATPFARPVGAPVRGVAALLGLGVL
                     AHVLGLLDYAQRVGQLPLTGLGPSLSFAGLVLAATLLVVEIAARDVSLTLVAAPLAAV
                     PTTCANLIGFIPGAEPVGARGAWLVAHIALSFLGIAAFGTAAAAGCMYLVERRELKSR
                     RFGAIYRFFPPLATLDRVNHVAAIAGWLGLTLGVVLAVTYSFAYREISVLKVVWAMGA
                     WLAVSGIALGRVVGGWQARRAAIYSSVSFAAVVVLYVAFRFAESNGGGRFL"
     gene            complement(1193..2338)
                     /locus_tag="VFN38_12335"
     CDS             complement(1193..2338)
                     /locus_tag="VFN38_12335"
                     /inference="COORDINATES: protein motif:HMM:NF013630.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HET9012600.1"
                     /translation="MKISRLGRSLSAAAILTVATAGSVSAQGVRSDSAATHTVKRGDT
                     LWDLAQAYLGDAYLWPEIYRLNTDQIEDPHWIYPGETLRLPGRVNAEAVAAAPAEPGD
                     TTRVAQRPPEEEPPRRVAGPTIFAPRVMARPRRAEQEAEVPPARVPMGDVLRAPYFDG
                     DKGPRGAGKVLIGYEIPGIQKPNATSNFQLYDKVLMSPPAGSVAAEREKFIVYTLGDY
                     VENSGMVVVPTALVQVVRPPRDGDAAIVEVLELYSQLNTGQLVVPIDTAGAGANQTPV
                     LVAPGTGQTAKVRFIHRDKTVLPSLNYYALFDLSARDGLKIGDEIEIYRPRTENRNDV
                     GPAVPEIAIATGQVVRVTPYGATARITSQEQPAIRIGESVRITARMP"
     gene            complement(2497..>2886)
                     /locus_tag="VFN38_12340"
     CDS             complement(2497..>2886)
                     /locus_tag="VFN38_12340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012601.1"
                     /translation="ELYRGMAYGYLSLATLSAGAPRAALAEADSTIVAMRRAGFCGPS
                     RGYVDHALASLALGDTATAARDFIIASAGYAAGSSTMGDTARKHLGARFDDTEFRRGA
                     DSVRAARSACEEAARERMKARERELGH"
BASE COUNT          438 a         1040 c         1027 g          381 t
ORIGIN      
        1 gcatgtcggc gacgttcacg aggcgcgcgg ccgcatgtgc gtcggcggtg acggcggcgt
       61 tcacggcccg atcgtccgtc gcggcgatga cgagatgcgc gtccccgatg tcggcgcgtg
      121 cgtagcgccg ctcggcgacg accacgcggc ccgcgtcggc cagggcgcgc agcgcatcgc
      181 tcaccttcgg cgccaccaca cgcactcgcg cgccggcctc gatcagcacc gctgccttgc
      241 gcgacgccac ggtgccgcca cccaccacga gcacgtcgat cgccgatccc tcgacgagga
      301 tggggaagcc gctcacagga agcgtcctcc gccgttcgat tccgcgaacc ggaaggcgac
      361 gtagagcacc acgaccgccg cgaacgagac gctcgagtag atcgccgcgc ggcgcgcctg
      421 ccagccgccg accacgcgtc cgagcgcgat gcccgagacg gccagccagg cgcccatcgc
      481 ccagacgacc ttgagcacgc tgatctcgcg gtacgcgaac gagtacgtca ccgcgagcac
      541 gacgccgagc gtgagcccca gccagcccgc gatggcggcg acgtggttca cgcgatcgag
      601 cgtggcgagc ggcggaaaga agcggtagat cgcgccgaag cgtcgtgact tgagctcgcg
      661 ccgctcgacg aggtacatgc agcccgccgc cgccgccgtc ccgaaggcgg cgatgcccag
      721 gaagctgagc gcgatgtgcg cgacgagcca ggcgccccgg gccccgaccg gctccgcacc
      781 ggggatgaac ccgatgaggt tggcgcacgt cgtcggcacc gccgcgaggg gagccgccac
      841 cagcgtgagg ctcacgtcgc gcgcggcgat ctcgacgacg agcagcgtcg ccgcgagcac
      901 gagcccggcg aacgacagcg acgggccgag ccccgtgagc gggagctggc ccacgcgctg
      961 cgcgtagtcc agcagtccca gaacgtgcgc gagcaccccc agtccgagca gggcggccac
     1021 accgcgcacc ggcgctccga ccggacgcgc aaaaggcgtc gcggcgaggg ccgcggcgcc
     1081 gatgtagcag gtgatggcga cgaagtgggc gatcgcggtc atgacgatcg cctaatctaa
     1141 tgcgcggaca ggcgttacgg cattccgccc cgcctgtccg ccaccctcgt gctcagggca
     1201 tgcgcgcggt gatgcgcacg ctctcgccga tgcggatcgc cggctgctcc tgcgacgtga
     1261 tgcgcgccgt ggcgccgtag ggcgtcacgc ggacgacctg acccgtcgcg atcgcgatct
     1321 ccggtaccgc cggcccgacg tcgttccggt tctcggtccg cggccggtag atctcgatct
     1381 cgtcgccgat cttcaggccg tcgcgcgccg acaggtcgaa cagcgcgtag tagttgagcg
     1441 aggggaggac ggtcttgtcg cggtgaatga agcgcacctt cgccgtctgt cccgtgcccg
     1501 gggccaccag caccggcgtc tggttcgcgc cggctcccgc ggtgtcgatc ggcacgacga
     1561 gctgtcccgt gttgagctgg gaatagagct cgagcacctc gacgatggcg gcatcgccgt
     1621 cacgcggcgg acgcaccacc tggaccagcg ccgtggggac gaccaccatc cccgagttct
     1681 cgacgtagtc gccgagcgtg tagacgatga acttctcgcg ctccgccgcc acgctgcccg
     1741 ccggcggcga catcaggacc ttgtcgtaca gctggaagtt cgaggtcgcg ttgggcttct
     1801 ggatcccggg gatctcgtag ccgatcagca ccttgccggc gccacgcgga cccttgtcgc
     1861 cgtcgaagta cggtgcgcgg agcacgtcac ccatcggcac ccgcgccggc ggcacctcgg
     1921 cctcctgctc ggcgcgacgc ggacgcgcca tcacgcgggg cgcgaagatg gtgggaccgg
     1981 cgacacggcg cggcggctcc tcttcggggg gacgctgcgc gacacgggtc gtgtcgcccg
     2041 gctccgccgg cgcggccgcg accgcctcgg cgttgacgcg cccggggagg cgcagggtct
     2101 cgccggggta gatccagtgc ggatcctcga tctggtcggt attgagccga tagatctcgg
     2161 gccagagata ggcgtcgccg aggtaggcct gggcgaggtc ccacagggta tcgccacgct
     2221 tcacggtgtg cgtcgccgcc gagtcgctgc gcacgccctg ggcggacacg ctgccggcgg
     2281 tggcgacggt gaggatggcg gcggcgctga gcgacctgcc gagtcgggaa atcttcacac
     2341 gcactcgagg gctgctgcgc ctcgcgaaag gcgcatggga aacgacgggc gccccgccgg
     2401 tggtggcggg gcttgtccgt atgacgactg atggcccgag gggataccgg cgcccgcgcc
     2461 ggccctcgcc gccccgggca cagccgcgtc ggaacgtcag tgcccgagct cgcgctccct
     2521 cgccttcatc cgctcccgcg cggcctcctc gcacgcgctc ctcgcggctc gcaccgagtc
     2581 ggcgccacgc cggaactccg tgtcgtcgaa tcgggcgccg agatgcttcc gcgcagtgtc
     2641 acccatcgtg ctggaacccg ccgcgtagcc agccgacgcg atgatgaagt cgcgtgctgc
     2701 agtcgccgta tcgcccagcg caagggaagc gagcgcgtgg tcgacgtagc cgcgcgacgg
     2761 tccgcagaac ccggcccgac gcatggcgac gatcgtcgag tcggcttcgg caagggcggc
     2821 ccgtggagca cccgccgaaa gcgtagcaag ggagagatat ccgtacgcca tgccgcgata
     2881 cagttc
//
LOCUS       DASSYW010000772         2856 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1108304, whole genome shotgun sequence.
ACCESSION   DASSYW010000772 DASSYW010000000
VERSION     DASSYW010000772.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2856)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2856)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2856
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1108304"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            114..422
                     /locus_tag="VFN38_12345"
     CDS             114..422
                     /locus_tag="VFN38_12345"
                     /inference="COORDINATES: protein motif:HMM:NF024845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-TFIIB domain-containing protein"
                     /protein_id="HET9012602.1"
                     /translation="MWEPGKPSQNENEYFARRDAEWLKEQRAALDRERAARAAGHQGL
                     KCPRCDGQLVVRDVQHVKIDVCEKCRGTWLDAGELEMVLHLPRAELLAAVHALDARPR
                     "
     gene            406..1014
                     /locus_tag="VFN38_12350"
     CDS             406..1014
                     /locus_tag="VFN38_12350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012603.1"
                     /translation="MRGRGSAARRAGGAIAAAFLFAGCRAEQARVDEPAAVSRTSSAA
                     AQRDCGPPVIDSAGVGGLRIGAPVDSVKARCTVLRDTTERRAEGMPARLLAVRVGTDT
                     LEAEVADGRVWRIEVTQRGVRTADSLGVGSPLAALLGIPGLRGAVGEGALYVMSPSRC
                     GLSFQLSTAELRADGWSAERLRTLPPSTVVTRVLVVGCPVRD"
     gene            1097..1507
                     /locus_tag="VFN38_12355"
     CDS             1097..1507
                     /locus_tag="VFN38_12355"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HET9012604.1"
                     /translation="MSEIEYRISPPLGNILLNRLYTAVWPDHEERDFQRVLERSVTYV
                     GAFDEDDVLVGFVYVAWDGGAHAFLLEPMVLPEHRGRGIGTELIRQAAREAGDAGARW
                     LHVVYRPDLERYYAAAGFRPSHAGMMPLHRTESP"
     gene            1577..2611
                     /locus_tag="VFN38_12360"
     CDS             1577..2611
                     /locus_tag="VFN38_12360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012605.1"
                     /translation="MRCLDIVLASSLALTLTLAPAADAQVARQAGAPASEPKTWTTPW
                     DKTRPRDPYADQQGRVWFVGQVGNYVARLDPRTGEFKRYEIDPGTHPHNLVVDRRGMV
                     WFTGNTNGRIVRMDPATGKLTTFMMPDSTVRDPHTMVFDRRGDAWFTAQGAGVVGRLT
                     TADGKIRLWKMAPRSRPYGIWMDSRDQPWFDLFGTNQIGTIDPKSGEFRGYTLPNERS
                     RPRRIVVTADDAVWYGDYTRGYLGRLDPLTGKVDEYALPGGAGSLPYAMTLDDRGRIW
                     LAETGAQPNRLVAFDPAKRAFTETVVIAADGPNTIRHMTFDPSTRQIWFGGDANMVGR
                     VQVSASPVVP"
     gene            2608..2814
                     /locus_tag="VFN38_12365"
     CDS             2608..2814
                     /locus_tag="VFN38_12365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012606.1"
                     /translation="MIRAQTTTAQPVPPAANRPAERSSRLSNGLIPLAIVAVVIAAAQ
                     WRRYRRRAAAASAARAEPPADSPR"
BASE COUNT          386 a         1031 c         1046 g          393 t
ORIGIN      
        1 tgcaacgtcg ccgccgcacc atgcgtggga gcgatggggg gggcggtcgc gcgggacttg
       61 ccgtgcatgg cgccggccgc agattgaaac gaggacacca tggggagggg cgcatgtggg
      121 agccgggaaa gccgagtcag aacgagaacg agtacttcgc gcgacgcgac gccgagtggc
      181 tcaaggagca gcgcgccgcg ctggaccgcg agcgcgcggc gcgcgcggcg ggccaccagg
      241 ggctcaagtg cccccgctgc gacggacagc tcgtcgtgcg cgacgtgcag cacgtcaaga
      301 tcgacgtctg cgagaagtgc cggggcacct ggctcgacgc cggcgagctc gagatggtgc
      361 tgcacctccc gcgagccgag ctgctcgccg ccgtccacgc gctcgatgcg cggccgcggt
      421 agcgccgcgc ggcgggctgg cggggcgatc gccgccgcct tcctgttcgc cggctgtcgc
      481 gcggagcagg cacgcgtgga tgagccggcc gccgtgtctc gcaccagctc ggccgcggcc
      541 cagcgcgact gcgggccgcc ggtgatcgac tcggcggggg tgggcgggct ccggatcggc
      601 gcgccggtgg attcggtgaa ggcgcgctgc acggtgctgc gcgacaccac cgagcggcgc
      661 gcggagggga tgccggcgcg gctgctcgcg gtgcgcgtcg gaacggatac cctggaggcc
      721 gaggtggctg acgggcgcgt ctggcgcatc gaggtcacgc agcgcggcgt tcgcaccgcg
      781 gactccctcg gtgtcggctc gccgctggcc gcgctgctgg ggatcccggg gctgcgcggc
      841 gccgtgggcg agggggcgct ctacgtgatg tcgccgtcgc ggtgcggcct cagcttccag
      901 ctctccacgg cggagctccg cgccgacggc tggtccgccg aacggctgcg gacccttccc
      961 ccctccaccg tcgtgacgcg ggtgctcgtg gtcgggtgcc ccgtccggga ctagcggacg
     1021 gggcacggcg ccggtctagc cgagcccgag cgctgggttc atcttgcctg ctgacgacgc
     1081 acagtcccgg gagctcatgt cagaaatcga gtacagaatc tccccgccgc tcggcaacat
     1141 cctcctgaac cggctctaca cggcggtctg gcccgaccac gaggagcggg acttccagcg
     1201 cgtgctcgag cgcagcgtca cgtacgtcgg cgccttcgac gaggacgacg tgctcgtggg
     1261 gttcgtctac gtggcctggg acggcggtgc ccacgccttc ctcctggagc ccatggtgct
     1321 ccccgagcat cgcggtcgcg gcatcggcac cgagctgatt cggcaggccg cccgcgaggc
     1381 gggggacgcc ggggcccggt ggctgcacgt ggtctaccgg cccgatctcg agcggtacta
     1441 cgccgccgcc ggcttccggc cctcgcacgc cgggatgatg ccgctgcacc gcaccgagtc
     1501 gccctgacgc gagcgttttc cgccggtgac gcgtagctca ttggatcacc gctcgccccc
     1561 cagtccggag gcattcgtgc gctgtctcga catcgttctc gcctcgtccc tcgcgctgac
     1621 cctcaccctc gcgccggccg cggacgccca ggtcgcacgg caggcgggcg ctcccgcgtc
     1681 ggagccgaag acctggacca cgccctggga caagacgcgc ccgcgtgatc cgtacgccga
     1741 ccagcaggga cgcgtgtggt tcgtgggcca ggtcggcaac tacgtcgcgc ggctggatcc
     1801 gcgcacgggc gagttcaagc gctacgagat cgatcccggc actcaccccc acaacctcgt
     1861 ggtggaccgg cgggggatgg tgtggttcac cggcaacacg aacggccgca tcgtgcggat
     1921 ggaccccgcg acgggcaagc tcaccacgtt catgatgccc gactccacgg tgcgcgatcc
     1981 gcacacgatg gtgttcgatc gccgcggcga cgcatggttc accgcgcagg gcgccggcgt
     2041 ggtcggccgg ctcaccaccg ccgacggcaa gatccggctg tggaagatgg cgccgcgctc
     2101 ccgcccgtac ggcatctgga tggactcccg cgaccagccc tggttcgacc tgttcggcac
     2161 caaccagatc gggacgatcg acccgaagtc gggcgagttc cgggggtaca cgctgccgaa
     2221 cgagcgctcg cgtccgcgcc gcatcgtcgt cacggccgac gacgccgtgt ggtacggcga
     2281 ctacacgcgg ggctacctgg gccggctcga tccgctcacc gggaaggtgg acgaatacgc
     2341 gctgcccggc ggggcaggct cgctgccgta cgccatgacg ctcgacgacc gcggccggat
     2401 ctggctcgcg gagacgggag cgcagcccaa ccggctcgtc gccttcgatc cggcgaagcg
     2461 cgccttcacc gagaccgtcg tcatcgccgc ggacggcccc aacaccatcc ggcacatgac
     2521 cttcgatcca tcgacgcgac agatctggtt cggcggcgac gcgaacatgg tcgggcgggt
     2581 gcaggtatcc gcgtcgccgg tggtgccatg atccgggcgc agacgaccac cgcgcagccg
     2641 gtgcccccgg ccgcgaaccg gccggccgag cgctcgtcgc gcctctcgaa cgggctcatt
     2701 ccgctggcca tcgtggccgt ggtgatcgcg gcggcgcagt ggcgccggta tcggcggcga
     2761 gcggccgccg cctcggccgc ccgtgcggag ccgccggccg attcgccgcg ctgagacgcg
     2821 cgccctcgcg gcgggcgcta cattctgcac atgacc
//
LOCUS       DASSYW010000773         3841 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1617803, whole genome shotgun sequence.
ACCESSION   DASSYW010000773 DASSYW010000000
VERSION     DASSYW010000773.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3841)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3841)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3841
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1617803"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..887
                     /locus_tag="VFN38_12370"
     CDS             <1..887
                     /locus_tag="VFN38_12370"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="M20 family metallopeptidase"
                     /protein_id="HET9012607.1"
                     /translation="VMHACGHDVHAAWAVGAAHLLAERPAEGDVLVVLQPAEETGTGA
                     AAMLASGALDGVAAIFGAHVDRRFVVGQVVAQAGSLAASADTFEVTLTGRGAHGARPH
                     ESADPVVCAAAVIGALQTIVARRVDPATPAVVTVATVHAGQALNVIPDHATLGGTLRA
                     VDPATRALLAAEVRRLVEGIAAAYGLTATMTLTLGPPPIVNPEVPATWARRAVESLLG
                     AEAVVPLGITNMAGEDFAYYMERIPGCFMRVGARLPGEPVIPAHTPQFHAAEESLFVG
                     AAVLAEAARVASGELALG"
     gene            complement(1086..1559)
                     /locus_tag="VFN38_12375"
     CDS             complement(1086..1559)
                     /locus_tag="VFN38_12375"
                     /inference="COORDINATES: protein motif:HMM:TIGR02436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four helix bundle protein"
                     /protein_id="HET9012608.1"
                     /translation="MSDSDDAAVATSRQRDRMQDHRKLRVWQLAHELAIAVRRASRIF
                     SNAGHGSLQSQMTRAAESIVLNIAEGCGSASQRELARFLDIAIKSTKELESQLELARD
                     YGALRTNTWELLSTRVVDVRRMLCGLRSKVLAADGTPKPRPNPDAVKRQTVNGQR"
     gene            1731..3071
                     /locus_tag="VFN38_12380"
     CDS             1731..3071
                     /locus_tag="VFN38_12380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HET9012609.1"
                     /translation="MDQNPGRTLERTLGFTDLVLIVIGTVIGSGIFIVPATVLRQSDG
                     AVGTAMLVWLVAGILSLLGALTYGELGAANPDAGGLYVYIRDSFGSLPAFLYGWTTFF
                     VISSGSVATLAVAFTGYLGQFMTVTPTMSKVIAVLVIVVIAAVNVRGTRQGSSVQNWS
                     TGLKTIAILVMSAALFARGTGFSGGVRVWPESFTPGLLSGVGLAMIGVLWAYEGWQYV
                     TFSAGEARDAQRTFPRAIIAGTAVLIGIYLLANLAYVAALGPAAMQTSQRVAADSVTA
                     LFGPAAGKLIAAVILVSMFSAANGLTLTSPRLYYAMSRDGVFFRKLAEVHPRFRTPAF
                     AIIAGSAWAALLAATGTFEQLLTYVVFSGWIFYGLGAMSIFVYRRRSPEMPRPFRVPG
                     YPLTPVLFVAASAAIVLNTLFTQPGRALVGLAVVLAGVPAYLIWKKRLQPGVRS"
     gene            3074..>3841
                     /locus_tag="VFN38_12385"
     CDS             3074..>3841
                     /locus_tag="VFN38_12385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012610.1"
                     /translation="MRRPPARSGTILRASATFRRAATPSRWALLVFFGAGGCATAPVP
                     LPAPAGIPAEVSAPVVRARDDSTYDVVIRNGRVLDGAGNPWILADVGIRDGRFAKIGV
                     VRSRGRTEIDARGRYVSPGWIDMMDQSGGVLPRNPLAENKLRMGVTTAIGGEGGTPVP
                     ASGITEYFRGLEQQGISINFGSYFSETQTRVPVLGMSARAPTAAELDRMRAIMDTAMR
                     AGAMGMTTALIYPPSSYATTAELAEVAKAVAPYGGFYA"
BASE COUNT          512 a         1304 c         1373 g          652 t
ORIGIN      
        1 gggtgatgca cgcctgcggg cacgacgtgc acgccgcgtg ggcggtgggc gcggcgcacc
       61 tgctggccga gcggcccgcc gaaggcgacg tgctcgtcgt gctccagccg gccgaggaga
      121 ccggaacagg tgcggcggca atgctggcga gtggtgcgct ggacggcgtg gcggcgatct
      181 tcggcgcgca cgtcgaccgg cgcttcgtcg tgggtcaggt cgtggcgcag gcgggctcgc
      241 tggccgcgtc ggcggacacc ttcgaggtca ccctcaccgg gcgaggcgcg catggtgcgc
      301 gcccgcacga gtcggccgac ccggtggtgt gcgcggcggc ggtgatcggc gcgctccaga
      361 ccatcgtcgc gcgacgggtc gatccggcga cgccggcggt ggtcacggtg gcgacggttc
      421 atgccggcca ggcgctgaac gtcatcccgg accacgcgac gctcggcggc accctgcgcg
      481 cggtggaccc cgccacgcgc gcgctgctcg cagcggaggt gcgccgcctg gtggaaggaa
      541 tcgcggcggc gtacggactc accgccacga tgacgctgac gctcggtccg cctccgatcg
      601 tgaacccgga agtcccggcc acgtgggcgc gacgggcggt ggaatcgctg ctgggcgccg
      661 aggccgtggt gccactcggc atcaccaaca tggcgggcga ggacttcgcg tactacatgg
      721 agcgcatccc cggctgcttc atgcgggtgg gcgcacggct gccgggcgag ccggtgatcc
      781 cggcccacac gccgcagttc catgcggcgg aggagagcct gttcgtgggg gcggcggtac
      841 tggccgaggc cgcgagggtc gcgtcggggg agctggcgct ggggtgagcg gctggcgctt
      901 cactgagagc ggacctgcgt ttggagtttg ccgttggccg ttggccgttt ggcgtttcgc
      961 tgatggccgg gttcggggag gcggacgggg gatccacgtt tggagtttgc cgttggccgt
     1021 tgaccgtttg gcgtttcact gctggtcggg ttcgggaagg cggacggggg atccacgttg
     1081 ggagtttacc gttggccgtt gaccgtttgg cgtttcactg cgtcgggatt tggtctgggt
     1141 ttcggcgttc catctgccgc gaggactttc gatcggaggc cgcacagcat gcgacgtacg
     1201 tccaccacac gggtcgacag cagctcccac gtgttcgtgc gcagggcccc gtagtccctc
     1261 gcgagctcga gctgcgattc cagctccttg gtggacttga tggcgatgtc gaggaatcgg
     1321 gcgagctcgc gttggctcgc gctgccacac ccctcggcga tgttcagcac gatggattcc
     1381 gccgctcgag tcatctggga ctggagcgat ccatgaccgg cattcgaaaa aattcgactg
     1441 gcgcggcgaa cggcgatcgc cagctcgtgt gccagctgcc agacccgcag ctttcgatgg
     1501 tcctgcattc ggtcacgctg ccgcgaagtc gcgacggctg catcatcgga atcactcacc
     1561 aatgattggt tccgcgtggc acggacgcac gccgatcggc acgaaacgac acgcacttaa
     1621 ctcgcaatta acacgcagtg aaacgccgca cggaccacgg agaacggcca actccaaacg
     1681 tggattcccc ctgactgccg gaagcattcc ctccctcgac ccgatcaacc atggatcaga
     1741 atcccggccg taccctcgag cgcaccctcg gcttcaccga tctcgtcctg atcgtgatcg
     1801 gcaccgtcat cgggtccggg atcttcatcg tcccggccac ggtgctccgg caatccgacg
     1861 gcgcggtcgg caccgcgatg ctcgtctggc tcgtggccgg catcctgtcg ctgctcggcg
     1921 cgctgaccta cggcgagctc ggcgccgcga atccggacgc ggggggactc tacgtctaca
     1981 tccgcgattc cttcggttcc ctgcccgcct tcctctacgg gtggaccacc ttcttcgtga
     2041 tcagcagcgg ctcggtggcc accctggcgg tggcgttcac ggggtacctc ggtcagttca
     2101 tgacggtgac gccgacgatg tcgaaggtga tcgccgtgct cgtgatcgtc gtgatcgccg
     2161 cggtgaacgt gcgcggcacc cggcagggct cgagcgtgca gaactggagc acggggctga
     2221 agaccatcgc catcctcgtc atgagcgcgg cgttgttcgc gcggggcacg gggttctcgg
     2281 gcggcgtacg cgtgtggccg gagtccttca cgcccgggct gctctccggc gtcggactgg
     2341 cgatgatcgg cgtgctgtgg gcatacgagg gctggcagta cgtgaccttc tcggccggtg
     2401 aggcacgcga cgcgcagcgg accttcccgc gcgcgatcat cgcgggcacc gccgtgctga
     2461 tcggcatcta cctcctggcg aacctggcct acgtcgccgc gctggggccc gccgcgatgc
     2521 agacgagcca gcgcgtcgcc gccgattcgg tgacggcgtt gttcgggccg gcggccggca
     2581 agctgatcgc cgcggtgatc ctcgtctcga tgttcagcgc ggcgaacggg ctcacgctca
     2641 cgtcgccccg tctctactac gccatgtcgc gcgacggcgt cttcttccgg aagctcgccg
     2701 aggtgcaccc gcgcttccgc acacccgctt tcgccatcat cgccggctcc gcgtgggccg
     2761 cgctcctcgc cgccaccggc accttcgagc agctgctcac ctacgtggtg ttctcggggt
     2821 ggatcttcta cggcctgggc gcgatgagca tcttcgtcta ccggcggcgg tcgccggaga
     2881 tgccgcgccc cttccgggtg ccgggctatc cgctgacgcc ggtgctcttc gtggccgcgt
     2941 ccgcggcgat cgtgctcaac accctgttca cccagccggg ccgtgcgctg gtggggctcg
     3001 cggtcgtgct cgcgggggtg cccgcgtatc tcatctggaa gaagcgtctt caaccgggag
     3061 tccgttcgtg agcatgcgtc gaccgccggc caggtccggc accatccttc gcgcgtcggc
     3121 cacgttccgt cgcgcggcca ccccttcgcg ctgggccctc ctcgtcttct tcggagcggg
     3181 cggctgcgcg acggcgccgg tgcccctccc cgcgcccgcc gggatccccg ccgaggtgtc
     3241 cgcgccggtc gtgcgcgcgc gcgacgactc cacctacgat gtcgtcatcc gcaacggccg
     3301 cgtgctcgac ggtgcgggaa atccgtggat cctggccgac gtcggcatcc gcgacggccg
     3361 ctttgcgaag atcggcgtcg tccggagccg cgggcgcacc gagatcgacg cgcggggccg
     3421 gtacgtctca ccgggctgga tcgacatgat ggaccagtcg ggcggcgtgc tgccgcggaa
     3481 tccgctggcc gagaacaagc tcaggatggg cgtcacgacg gcgatcggcg gcgagggcgg
     3541 aaccccggtg cccgcgtcgg gcatcacgga gtacttccgc ggcctggagc agcaggggat
     3601 cagcatcaac ttcggcagct acttcagcga gacgcagacg cgcgtcccgg tgctgggcat
     3661 gtcggcgcgc gcgccgacgg cggcggagct cgaccggatg cgtgccatca tggacacggc
     3721 gatgcgcgcc ggcgcgatgg ggatgacgac ggcgctcatc tatccgccca gcagctacgc
     3781 gaccaccgcc gagctggccg aggtggcgaa ggcggtcgca ccgtacggcg gcttctacgc
     3841 g
//
LOCUS       DASSYW010000774         3127 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1411062, whole genome shotgun sequence.
ACCESSION   DASSYW010000774 DASSYW010000000
VERSION     DASSYW010000774.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3127)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3127)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3127
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1411062"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..379)
                     /locus_tag="VFN38_12390"
     CDS             complement(<1..379)
                     /locus_tag="VFN38_12390"
                     /inference="COORDINATES: protein motif:HMM:NF024260.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HET9012611.1"
                     /translation="MSIRSKMAVGPVDSNFDLLTDVMEQVRLEAPVFFTADLAAPYGI
                     SVVRKGRAPFYAMRSGEGRLQVGERAERRVRAGDFILLPGGAPHVVRSGPKAKVVPFD
                     EWLATHPMDHRGFVRHKGSGPVSR"
     gene            484..822
                     /locus_tag="VFN38_12395"
     CDS             484..822
                     /locus_tag="VFN38_12395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012612.1"
                     /translation="MRTNQLALATVLAAAALSVNAGPRMESATSPFTYEAVGATPVVT
                     IGRASAAPKAVEAPKPATAATPAKAPAATRAAVPATSTFTYDALGATPHIDVRKQPAR
                     SEVQAPASAH"
     gene            928..2196
                     /locus_tag="VFN38_12400"
     CDS             928..2196
                     /locus_tag="VFN38_12400"
                     /inference="COORDINATES: protein motif:HMM:NF024907.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VCBS repeat-containing protein"
                     /protein_id="HET9012613.1"
                     /translation="MRSGLLAGLAVAVALAGCGAPEDTSKGGGSSSSSWIQTDLAGAD
                     LDGDGRTDIVTIATLQQSFGVSDGTLKIYRQTTPGAFVATSIPVGRHPWRLQIADVNG
                     DGAPDLLVLDVIGGSGANDDVLYLLLQDVNNRGRFLAPRVAASGLSANDFVVTDANLD
                     VAPDIVTAGVPAGGAGAAQYLQSLSARGTFEAASPLNLAGRVQRVGAGDVGGSGRDDL
                     VAYSIVDTSPAANSPGQLVVAYSTLFDAAATSAFYLTPGRVMASHVGVNAQLIALADV
                     DGNTLQDIVVCFTPVSSAFQPKISVVLQRALAQLEVVDTSLANLSGLDSFVVADLNGD
                     GRPDVATTGTFTVGSTLRSRTNVLAPTVAGRYTPTATIDMTVPMSRINAIDVDGDTLT
                     DLILLGEGNRAFVMLQSTTTRGTFSAPRQL"
     gene            complement(2204..2680)
                     /locus_tag="VFN38_12405"
     CDS             complement(2204..2680)
                     /locus_tag="VFN38_12405"
                     /inference="COORDINATES: protein motif:HMM:NF013722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HET9012614.1"
                     /translation="MPVTISLDQLVARAGSEVAVSEWLDITQPMIDEFADAIHDRQWI
                     HVDPERAARESPFRDAAGQRRTVAHGFLTLSLLTRMLENAIDVSDRQTGINVGFNKVR
                     FTGPVTSGSRVRGRFALADVKPVAGGVQLTWNVTVECESTGKPVLVAEWLTRILTG"
     gene            complement(2685..2903)
                     /locus_tag="VFN38_12410"
     CDS             complement(2685..2903)
                     /locus_tag="VFN38_12410"
                     /inference="COORDINATES: protein motif:HMM:NF025733.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine-rich CWC family protein"
                     /protein_id="HET9012615.1"
                     /translation="MKPDESEPVERTVMSCSSCGTSFHCGRDDADGCWCARLPALPRE
                     RYAANAGCLCEACLRRMLDDPAASRPPG"
BASE COUNT          495 a         1140 c         1035 g          457 t
ORIGIN      
        1 cgcgcgagac cggtccgctg cccttgtggc gcacgaaccc gcggtggtcc atcggatggg
       61 ttgccagcca ttcatcgaag ggcaccacct tcgccttcgg gcccgagcgc acgacgtgcg
      121 gcgcgccgcc gggcagcagg atgaagtcgc ccgcgcgcac cctgcgttcg gcgcgctcgc
      181 cgacctgcag gcggccttcg cccgagcgca tcgcgtagaa gggcgcgcgg cccttgcgca
      241 cgaccgagat gccgtacggc gcggcgaggt ccgccgtgaa gaacactggc gcctccagcc
      301 gcacctgctc catcacgtcg gtgagcaggt cgaagttcga gtccaccggc cccaccgcca
      361 tctttgaacg aatcgacata ttttctatcc ggataggtct tatctttccg tcgtactccg
      421 cgcaccatac gcctcatcaa gtcgccggtc acttggccgg agtgcccaac aagaggagtc
      481 gtcatgcgta ccaaccaact tgccctcgcc accgtcctcg ccgccgccgc cttgtcggtc
      541 aacgccgggc cgcggatgga atcggccacg agtccgttca cgtacgaagc ggtcggcgca
      601 acgccggtcg tgacgatcgg ccgcgccagc gccgcgccga aggccgtcga agcgccgaag
      661 ccggccacgg cggcaacacc ggccaaggcg ccggccgcca cccgcgccgc cgtgcccgcc
      721 acgtcgacgt tcacctacga cgcgctcggg gccacgccgc acatcgacgt caggaagcaa
      781 cccgcccgga gcgaagtaca ggcgcccgca agcgcgcact gagccgagcg gcattgctga
      841 ccttgggcaa agggcccgca ggcgggcccg tggtccccgg acgaaggtgc tagaaagtca
      901 ccatctgcct gcgaaagtgg tggtggcatg cgtagtggat tgctggccgg cctggccgtt
      961 gccgttgccc ttgccggttg cggcgcgccg gaggacacct ccaaaggcgg cggctcgagc
     1021 tcctcgtcct ggatccagac cgatctcgcg ggcgcggacc tcgacggcga cggacgcacc
     1081 gacatcgtca ccatcgccac gctgcagcag agcttcggcg tgtccgacgg cacgctgaag
     1141 atctaccgcc agaccacccc cggggcgttc gtcgccacgt cgatcccggt cggccgccat
     1201 ccgtggcgac tgcagatcgc cgacgtcaac ggcgacggcg cccccgacct gctggtgctc
     1261 gacgtgatcg gcggctcggg cgccaacgac gacgtgctct acctgctgct gcaggacgtc
     1321 aacaaccgcg ggcgcttcct cgcgccacgc gtggccgcga gcgggttgtc ggccaacgac
     1381 ttcgtggtca ccgacgccaa cctcgacgtc gcgccggaca tcgtgacggc gggcgtgccg
     1441 gcgggcggcg ccggcgcggc gcagtacctg cagagtctct ccgcgcgcgg aacgttcgag
     1501 gcggcgtcgc cactgaacct ggccggccgt gtccagcgcg tcggcgccgg cgatgttggc
     1561 ggctccgggc gcgacgacct ggtggcttat tccatcgtcg acaccagccc ggccgcgaat
     1621 tcgccggggc aactggtcgt cgcgtactcg accctgttcg acgccgcggc cacctccgcg
     1681 ttctacctca cgccggggcg ggtgatggcc tcgcacgtcg gcgtcaacgc gcaactgatc
     1741 gcgctggccg acgtcgacgg caacacactg caggacatcg tcgtctgctt cacgccggtc
     1801 tcgagcgcct tccagccgaa gatctcggtg gtgctgcagc gcgcgctcgc gcagctcgag
     1861 gtcgtcgaca ccagcctcgc gaacctgagc ggactcgaca gcttcgtcgt cgccgacctc
     1921 aacggcgacg gccggcccga cgtggcgact accggcacct tcaccgtcgg gtcgacgctg
     1981 cgctcgcgga cgaacgtgct ggcgccgacc gtcgcgggac gctacacgcc gacggccacg
     2041 atcgacatga cggtgccgat gtcgcggatc aacgcgatcg acgtcgacgg cgacacgctg
     2101 accgacctga tcctgctcgg cgaaggcaac cgcgcgttcg tgatgctcca gtcgacgacg
     2161 acccgcggca cgttcagcgc gccgcggcag ctgtagcgca cggtcagccc gtcaggatcc
     2221 gcgtcagcca ctcggcgacc agcaccggct tgccggtgct ttcgcactcc acggtcacgt
     2281 tccacgtcag ctgcacgccg cccgccaccg gcttcacgtc ggccagcgcg aagcggccgc
     2341 gcacccggct gccggaggtg accggcccgg tgaagcgcac cttgttgaat ccgacattga
     2401 tgccggtctg gcggtccgac acgtcgatcg cgttctccag catgcgcgtc agcagcgaca
     2461 gcgtgaggaa gccgtgcgcc accgtgcgcc gctggccagc cgcgtcgcgg aacggcgact
     2521 cgcgcgcggc gcgctccgga tcgacgtgga tccactggcg gtcgtggatc gcgtcggcga
     2581 attcgtcgat catcggctgc gtgatgtcga gccactcgct gacggcgact tcgctgccgg
     2641 cacgcgcgac gagctggtcg agggagatcg taacgggcat gcgttcatcc tggcggccgc
     2701 gacgcggccg ggtcatcgag catacggcgg aggcaggcct cgcacaggca gccggcgttc
     2761 gccgcatagc gctcgcgcgg cagcgcgggc aggcgcgcgc accagcaccc gtccgcgtca
     2821 tcgcgtccgc aatggaacga cgtgccgcaa ctcgagcacg acatcaccgt gcgctccaca
     2881 ggttcgcttt cgtccggctt caccgtgact tcctctccgc cttgatgagc gtcaacagtg
     2941 cgctcacgat gagcgtgctt cccaagcccg tggctagcat gaaagggccg tagcaacgct
     3001 acgcaaaggg gcgagtatga aacgagtaac gataagcatc ctgctgggcg cggcggccgc
     3061 cctcacgatg agcggcgtgc tggcccagcc cgcgaagatc gacctcggca gaagcgagta
     3121 catggcg
//
LOCUS       DASSYW010000775         2232 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_762116, whole genome shotgun sequence.
ACCESSION   DASSYW010000775 DASSYW010000000
VERSION     DASSYW010000775.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2232)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2232)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2232
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_762116"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..530)
                     /locus_tag="VFN38_12415"
     CDS             complement(<1..530)
                     /locus_tag="VFN38_12415"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HET9012616.1"
                     /translation="MTRVLIVDDDPSTLASLSRAFRLAGHEAVVCDNAARGIELVRAE
                     RFDVVFSDVVMPGKDGLAMLEELRERGLAIPIIMMSGQATVDMAVRATRLGALDFLEK
                     PVSADKLLITLDNALKMVRLEEENRQLRRQVGRREIVWQSDVMRRVMAQVDRVAASES
                     RVCILGETGTGKELVAR"
     gene            complement(527..>2232)
                     /locus_tag="VFN38_12420"
     CDS             complement(527..>2232)
                     /locus_tag="VFN38_12420"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HET9012617.1"
                     /translation="VTVSAGARQSFAALDAERSNAAVAQFRREFTSEGENVVRRVERL
                     AAGDAVRRLAADVDAAGRDYAAFVDEAAPLAAAEGLDFLDVVAADGTVISSAHWPARF
                     GYRHAWAVPAAGTSVAFFQPVDVPQDTALGLVAVRAVQARGTTVYLAGGRQMNRRFLS
                     ALTLPRGMRAWLYRNVQPEVSRRWLVDADAIDDAAALEPLIARVRDTGREAGETVARD
                     DGPETVQAIPLPGRDRALAGVLLVGSSGREQAALVRRIRWIGVLFGGVGIALGFVLSF
                     VVAARVTRPVEQLAEAAHEIAGGRWDVPVDGIRAPGEIGALATAFGTMSQQLVDQRER
                     LVQAERVAAWRELARRLAHELKNPLFPLRVTLDNLRRAKPLPPPEFDEVFDESVDTLT
                     RGIGNLNTVIGRFSDFAKMPVPDLTAVSPNTLVEESLALFRAQLSAPGAPPVETTVDL
                     DPDAGHVRADGEQLARSLQNLILNAIDAMPSGGRLSIRTRRTGDTVRIDVSDSGQGLT
                     EEERSRLFTPYYTTKAHGTGLGLAIVQSVVADHHGKIWVDSAPGQGATFHIELPAGDP
                     A"
BASE COUNT          312 a          822 c          791 g          307 t
ORIGIN      
        1 cgcgccacca gctccttgcc ggtgccggtc tcgccgagga tgcagacgcg cgactcgctg
       61 gccgcgacgc ggtccacctg cgccatcacg cggcgcatga cgtcgctctg ccagacgatc
      121 tcgcggcgtc cgacctggcg ccggagctgg cggttctcct cctcgagccg caccatcttc
      181 agcgcgttgt cgagcgtgat gaggagcttg tcggccgaga ccggcttttc caggaagtcg
      241 agggcgccca ggcgcgtggc gcgcaccgcc atgtccaccg tggcctggcc cgacatcatg
      301 atgatcggga tcgccaggcc gcgctcgcga agctcttcga gcatggccag gccgtccttg
      361 cccggcatga cgacgtcgga gaacacgacg tcgaaccgct cggcgcgcac gagctcgatg
      421 ccgcgcgccg cgttgtcgca caccaccgcc tcgtgtccgg ccagccggaa cgcgcgcgac
      481 agcgacgcca gcgtggaggg gtcgtcgtcc acgatcagca cgcgcgtcat gcgggatccc
      541 cggccggcag ctcgatgtgg aacgtggcgc cctggccggg cgcgctgtcc acccagatct
      601 tgccgtggtg atcggccacg accgactgga cgatcgcgag gccgagcccg gtgccgtgtg
      661 ccttggtggt gtagtagggc gtgaacaggc ggctgcgctc ctcttcggtg agtccctgcc
      721 ccgagtctga cacgtcgatg cggaccgtgt cgccggtacg ccgcgtgcgg atcgagagcc
      781 ggccccccga cggcatcgcg tcgatggcgt tgagaatgag gttctgcagc gaacgggcca
      841 gctgctcgcc gtcggcccgg acgtgccccg catcgggatc gagatcgacc gtggtttcga
      901 cgggcggtgc gccgggcgcc gagagctgcg cgcggaacag cgcgaggctc tcctcgacca
      961 gcgtgttcgg cgagacggcg gtgaggtcgg gcaccggcat cttggcgaag tcgctgaagc
     1021 ggccgatcac ggtgttcaga ttgccgatgc cgcgcgtcag cgtgtccacg ctctcgtcga
     1081 acacttcgtc gaattccggc ggcggcagcg gcttggcgcg ccgcaggttg tcgagcgtga
     1141 cgcgcagcgg aaacagcggg ttcttcagct cgtgcgcgag ccgccgcgcc agctcgcgcc
     1201 acgccgccac ccgttccgcc tgcaccagcc gctcgcgctg atcgacgagc tgctgcgaca
     1261 tggtgccgaa ggccgtggcc agcgcgccga tttctcccgg cgccctgata ccgtcgacgg
     1321 gcacgtccca ccggccgccc gcgatctcgt gcgccgcctc ggccagctgt tccaccggac
     1381 gtgtcacccg cgcggcgacg acgaagctca ggacgaagcc gagcgcgatg ccgactccgc
     1441 cgaacaggac gccgatccag cggatgcgac ggacgagcgc ggcttgctcg cgccccgagc
     1501 tcccgacgag cagcacgccg gcgagcgcgc gatcgcgccc cggcagcgga atcgcctgca
     1561 cggtctcggg accatcgtcg cgtgccaccg tctcgccggc ttcgcggccg gtgtcgcgca
     1621 cgcgcgcaat cagcggctcg agcgccgccg catcgtcgat ggcgtcggcg tccacgagcc
     1681 agcgccgcga cacctccggc tgcacgttgc gatagagcca ggcgcgcatg ccgcgcggca
     1741 gcgtcagcgc cgacaggaag cgccggttca tctggcggcc gccggcgaga tacacggtcg
     1801 tgccgcgcgc ctgaaccgcg cgcaccgcga ccaggccgag cgccgtgtcc tgcggcacgt
     1861 ccacgggttg gaagaaggcg acagaggtgc ccgcggccgg cacggcccag gcgtggcgat
     1921 agccgaagcg ggcgggccaa tgcgccgacg agatcaccgt gccgtctgcg gccacgacgt
     1981 cgaggaagtc cagcccttcg gcggcggcga gcggcgccgc ctcgtcgacg aacgccgcgt
     2041 agtcgcgtcc cgcggcgtcc acgtcggcgg cgagccgccg caccgcgtcg cccgcggcga
     2101 gccgctcgac gcgcctcacc acgttctcgc cttcgctggt gaactcgcgg cggaactgcg
     2161 cgacagccgc gttgctgcgt tccgcgtcga gcgccgcgaa cgattgccgg gcgcccgccg
     2221 acacggtgac cg
//
LOCUS       DASSYW010000776         3207 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1818490, whole genome shotgun sequence.
ACCESSION   DASSYW010000776 DASSYW010000000
VERSION     DASSYW010000776.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3207)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3207)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3207
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1818490"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1902
                     /locus_tag="VFN38_12425"
     CDS             <1..1902
                     /locus_tag="VFN38_12425"
                     /inference="COORDINATES: protein motif:HMM:NF037959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fused MFS/spermidine synthase"
                     /protein_id="HET9012618.1"
                     /translation="YFGYARQEKKTTGREPITAKLVANLMAAAGALLLERVAPVVAVT
                     SDDAQDARAAPPQAGAAAPLSAAVQRVILVTFAISGFVAFGLEIIWFRMLVILFRPTT
                     YAFTMMLATVLAGIALGSLLAAPLARVRRLQPLTALAALEVLLALAAAASMVIIGNAN
                     AIFVWAGPFFTGGPLAYFGPMAVTSIAAILPSALLMGMAFPIGIGLWTASVSPAHAGR
                     RIGLIYAVNVAGAVAGSLVTGFVLLPLFGGRTSLLIASGLALAAGVLLLASLRRPIAA
                     VAVSIAALAAFAGIARRTSDPAVQLLRSRYPREVSVWRKEDSHAMVSILRRDSAFAAP
                     VHALYINGMHQASDTPTMVGYHRLIGTLPMAVHAAPRRALVIGAGGGATAGAVAAFSA
                     STAVDVVELSPAVVEATRQFSGINQNLLERPNVHVRVDDGRNYMLLTPKRYDVITADV
                     ILPVHAGAGNLYSVEYYRLMRRVLDHRGIALQWIGSVSDTEYKLIMRTFVSVFPHTTL
                     WHGGSLLIGATRPLVLDEEAFLAKQADPQSGAALDAMGFTSLRRPARELYGGTSGAEG
                     IRRRRAGAHRRSAADGVFPGVTPARSGGGPLAAPGRSLAARRARQAAGRRWSSRRRRR
                     RGYCGFTVG"
     gene            complement(1878..>3207)
                     /locus_tag="VFN38_12430"
     CDS             complement(1878..>3207)
                     /locus_tag="VFN38_12430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="peptidase dimerization domain-containing
                     protein"
                     /protein_id="HET9012619.1"
                     /translation="GIPTAFMATWGSGKPVIALGSDIDGIPQSSQKPGVAYHEPLIEG
                     APGHGEGHNSGQAVNITAAIAVKKLLEREKLPGTIRIWPGTAEELVGTKAYFVREGFF
                     ADVDVALFTHVSDELSVSWGDRQGTGLVSVEYTFTGETAHSAGAPWRGRSALDAVELM
                     NIGWNYRREHLPLEHRSHYVITNGGDQPNVVPRNASVWYYFRHTTYPKIKELWGIGDS
                     LAKGAALMTNTELTGSRVIGTAWPQHFNKVVAETTWANIQKVGMPQWSDADQTLAKAL
                     QKELGSDQRGLTTKVGAELQGPVRENRGGGSDDIGDISWNVPTVTLRFPSNIPGLPGH
                     NWANAISMATPIAHKGATAGARVQAMTLLDLMLKPALIDQSWDYFKNVQTKDIKYEPL
                     IRPQDKPAIDMNTAVMDRYRPELKKYYYDPSRYKSYLEQLGISYPTVKPQ"
BASE COUNT          428 a         1145 c         1070 g          564 t
ORIGIN      
        1 tacttcggct acgcccggca ggagaagaag accacgggcc gggagccgat caccgccaag
       61 ctggtcgcca acctcatggc cgccgccggc gcgctgctgc tcgagcgcgt cgcgccggtt
      121 gtcgccgtga cgagcgacga cgcgcaggat gcacgtgccg cgccgccgca ggccggcgct
      181 gccgcgcccc tctcggccgc cgtgcagcgc gtcatcctcg tgacgttcgc gatctccggc
      241 ttcgtcgcgt tcggcctcga gatcatctgg tttcgcatgc tcgtcatcct cttcaggccg
      301 acgacctacg ccttcacgat gatgctcgcg accgtgctcg cggggatcgc gctcggcagc
      361 ctgctggccg cacccctcgc ccgggtccgg cggctgcagc cgctgaccgc gctcgcggcg
      421 ctcgaggtcc tgctcgcgct cgcggccgca gcgtcgatgg tgatcatcgg caacgccaac
      481 gccatcttcg tctgggccgg cccgttcttc accggcggac cgctcgcgta cttcggcccg
      541 atggcggtca ccagcatcgc agcgatcctg ccctcggcgc tgctcatggg catggcgttt
      601 ccgattggca tcggcctctg gaccgccagc gtcagcccgg cgcacgccgg ccgccgcatc
      661 gggctcatct acgccgtcaa cgtcgccggc gccgtcgccg gatcgctcgt gaccggattc
      721 gtccttctcc cccttttcgg cgggcgcacc agcctcctca tcgcctccgg cctggcgctc
      781 gccgccggcg tgctcctgct cgcgagcctg cgccggccaa tcgccgccgt cgccgtctcg
      841 atcgcggcgc tcgccgcgtt tgccggaatc gcgcggcgca cgtccgaccc ggccgtgcag
      901 ctcctgcgct cgcgataccc tcgcgaagtg tcggtatggc gcaaggagga cagccacgcg
      961 atggtctcaa tcctgcgtcg ggactcggcc ttcgcggcgc cggtgcacgc gctctacatc
     1021 aacggcatgc accaggccag cgacaccccg acgatggtgg gttatcaccg gctgatcggc
     1081 acgctgccga tggccgtgca cgcggcgcca agacgcgcgc tcgtcatcgg cgccggcggc
     1141 ggcgcgacgg cgggcgcggt cgctgccttc tccgcctcga ccgccgtcga cgtcgtcgag
     1201 ctctcgcccg ccgtcgtcga ggcgacacgc cagttcagcg gcatcaacca gaacctgctc
     1261 gagcgcccca atgtccacgt tcgcgtcgat gatgggcgca actatatgct cctgacgccg
     1321 aagcgctacg acgtgattac ggccgacgtg atcctgccgg tgcacgcggg cgccgggaac
     1381 ctgtactcgg tcgagtacta ccggctgatg cggcgggtgc tcgatcaccg cgggatcgcg
     1441 ctgcagtgga tcggcagcgt cagcgacacc gagtacaagc tgatcatgcg cacgttcgtc
     1501 agcgtcttcc cgcacacgac gctctggcac ggcggctcgc tgctgatcgg cgcaacgcgg
     1561 ccgctggtgc tcgacgagga ggcgtttctc gcgaagcagg ccgacccgca gtcgggcgcg
     1621 gccctcgacg cgatgggctt cacgagcctt cgacgccctg ctcgcgagtt atacggcggg
     1681 accagcggag ctgaaggcat tcgtcggcga cgggccggtg ctcaccgacg atcggccgct
     1741 gacggagtat ttcctggcgt taccccagca cgatccggcg gtggacctct cgcggctcca
     1801 gggcgaagtc tggcggcacg tcgtgcgcgc caggccgccg gccgcaggtg gagcagccgg
     1861 cggcggcgcc gccgtggcta ctgcggcttc acggtcgggt agctgatccc gagctgctcg
     1921 aggtaggact tgtagcgcga cgggtcgtag taatacttct tcagctccgg ccggtaccga
     1981 tccatcacgg ctgtgttcat gtcgattgcc ggcttgtcct gcggacggat gagcggctcg
     2041 tacttgatgt ccttcgtctg cacgttcttg aagtagtccc acgactgatc gatgagcgcc
     2101 ggcttcagca tgaggtcgag aagcgtcatc gcctgcaccc tggcgcccgc cgtggcgccc
     2161 ttgtgcgcga tcggggtggc catcgagatc gcgttcgccc agttgtgccc gggcaggccg
     2221 gggatgttcg acgggaaccg cagcgtcact gtcggaacgt tccaggagat gtcgccgata
     2281 tcgtccgagc cgccgccgcg gttctcgcgg accggccctt gcagctcggc gccgaccttc
     2341 gtcgttagac ctcgctggtc gctcccgagc tccttctgca gcgccttggc cagcgtctga
     2401 tcggcgtcgc tccactgcgg catgccgacc ttctggatgt tcgcccacgt cgtctcggcc
     2461 acgaccttgt tgaagtgctg cggccaggcg gtgccgatga cgcgcgagcc cgtgagctcg
     2521 gtgttggtca tcagcgccgc gcccttcgcg agggagtcgc caattcccca gagctctttg
     2581 atcttcggat aggtcgtgtg gcggaagtag taccagaccg aggcgttgcg tggcacgacg
     2641 ttcggctgat cgccgccgtt ggtgatgacg tagtgcgagc ggtgctcgag cggcaggtgc
     2701 tcgcggcggt agttccagcc gatgttcatg agctcgacgg cgtcgagcgc gctgcggccg
     2761 cgccacggcg cgccggccga gtgcgccgtc tccccggtga acgtgtactc gaccgagacc
     2821 agcccggtgc cctggcgatc cccccacgac accgacaatt cgtcgctcac gtgcgtgaag
     2881 agcgcgacgt cgacgtccgc gaaaaaaccc tcgcgcacga aataggcctt cgtgccgacg
     2941 agctcctccg ccgtgccggg ccagatgcgg atcgtgcccg gcagcttctc gcgctccagc
     3001 agcttcttca ccgcgatcgc ggcggtgatg ttcaccgcct ggccggagtt gtggccttcg
     3061 ccgtgcccgg gtgcgccttc gatgagcggc tcgtgatagg cgacgccggg tttctgcgac
     3121 gactgcggga tgccgtcgat atcggacccg agcgcgatca ccggcttgcc cgagccccac
     3181 gtcgccatga acgcggtggg gatgccg
//
LOCUS       DASSYW010000777         2226 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_99093, whole genome shotgun sequence.
ACCESSION   DASSYW010000777 DASSYW010000000
VERSION     DASSYW010000777.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2226)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2226)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2226
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_99093"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1166)
                     /locus_tag="VFN38_12435"
     CDS             complement(<1..1166)
                     /locus_tag="VFN38_12435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012620.1"
                     /translation="MMHVGEKPYVITASASMNAYRGPLAWGQVELSSRVLTFDAVSSM
                     LTEILPVDQQRALDEFGAIEHEILPPNGILDRFTVVAARGGEDVWVEVRRKPMPAAVS
                     GTSAALPVNPGAVAPSPTETGSTAVETVAAAPGDAVASAAAAPPVEEPGAPIETAASP
                     PLKHAEPVGDVHEPPASGAAPQPIETIVVALPGEAAEEVTLAGLPDDAIQLVDDEQQG
                     VPTEAEVDAMLAATASALLTSGLGADRTSDADMAAAAETLALVDAPADFEIGHRPEPV
                     AEDDVDVAGEVELVFDQDAAAAAIGVLSPQIPIEVAPEAGDEAAPVYTDVGSERADAA
                     SAVEPRPEPPAFELVAPTDLPAEPIAEEITEPAAVAPAGDAPLFSEDAIAAAAAT"
     gene            complement(1584..>2226)
                     /locus_tag="VFN38_12440"
     CDS             complement(1584..>2226)
                     /locus_tag="VFN38_12440"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ubiquinone/menaquinone biosynthesis
                     methyltransferase"
                     /protein_id="HET9012621.1"
                     /translation="TIADRYDLITVVLSYGQDRRWKARLAAMAPAGGAARALDLACGT
                     GDIALALHGRGVETVGLDITPRMIEIARAKTRPGGPRFVVGDMMALPFPAASFDIVTT
                     GYGIRNVPVIAPALAEIHRVLRPGGTLLSLDFNRPANAVMRAVYVAYLTVVGSTLGFV
                     LHGDPDTYRYIPESIRRYPGAAAVSGIARASGFAACEHYDVLGGLMAIHRAVK"
BASE COUNT          343 a          759 c          786 g          338 t
ORIGIN      
        1 gtggcagccg ccgcggcgat cgcgtcctcc gagaagagcg gcgcgtcgcc ggcaggtgcc
       61 accgccgcag gttcggtgat ctcttcggcg atcggttccg cgggcaggtc ggtcggcgca
      121 accagctcga aggcgggagg ctccggccgc ggctcgacgg cggatgcggc gtccgcgcgt
      181 tcggatccga cgtcggtgta taccggcgcg gcctcgtcgc cggcctccgg tgcaacctcg
      241 atcggaatct gcggcgacag tacgccgata gccgccgcgg cggcgtcctg atcgaaaacg
      301 agctcgacct cgccggcgac atcgacgtca tcttccgcaa ctggttccgg gcggtgtccg
      361 atctcgaagt ccgccggagc atcgacaagc gcgagggtct cggctgcggc ggccatgtcg
      421 gcgtcggatg tgcggtccgc ccccaggcct gacgtgagca gcgccgaggc ggttgccgcg
      481 agcatcgcgt ccacttccgc ttccgtcggc acgccctgct gctcgtcgtc gacgagctga
      541 atcgcgtcgt cgggaaggcc ggcgagcgtc acttcctcgg cggcctcacc gggcagcgcg
      601 acaacgatcg tctcgatcgg ctgcggcgct gcgccgctcg cgggaggttc gtgaacgtcg
      661 cccaccggct ccgcgtgttt gagcggcggg gatgcggccg tttcgatcgg cgcaccaggt
      721 tcttcaacgg gcggagcggc ggcggcggac gcaacggcgt cgccgggcgc agcggcaacg
      781 gtctcgaccg ccgtcgaacc ggtttcggtc ggtgacgggg cgacggcacc gggattcacc
      841 ggcagcgccg cggacgtacc cgacaccgcc gccggcatcg gcttgcgccg tacctcgacc
      901 cacacgtcct cgccgccgcg cgcggcaacg acggtgaagc gatcgaggat gccgttgggg
      961 ggaagtattt cgtgctcgat ggcgccgaac tcgtcgaggg cgcgctgctg atcgacgggc
     1021 aggatctccg tcagcatgct cgacaccgcg tcgaacgtca gaacgcggga ggagagctcc
     1081 acctgccccc acgcgagcgg accgcgatac gcgttcatcg acgcggacgc cgtgatcaca
     1141 tacggcttct cgccgacgtg catcaccagt gcgtctcctt cgaggcgaac gatggcgtcg
     1201 agcagcgaat cgagcagctt cacagcgtgg tctgcgtccc ggtgatcggc atggcctgga
     1261 ccgcttaccg gccaggcgtg tctatcgagt cgtgtgtgcg ctggggcgcc gtgatacggg
     1321 tcctactggc gttcgccttg gctcgtcgga tgcaccgatg ccggggaggc tttgagcacc
     1381 tgggaacgcg cgatttctcg ctgaacagta tcgctgaacg ccaccgccgc agccatcgtt
     1441 ttcgacgatt tccgcgcccg ggtcgccgcc ggttcgattt ttcatggaac ccgcgggcat
     1501 tgacgtgcag agccctcgcc gacatcacga aggcgtccag ctcgaagaca ccatcgtagc
     1561 agacgcgccg cgctcctgga aagctacttc accgcccgat ggatggccat gaggccgccg
     1621 agcacgtcgt aatgctcgca ggccgcaaac ccggacgcgc gagcgatccc ggaaacagcc
     1681 gcggcgccgg gatagcgacg gatcgattcc ggaatgtagc ggtaggtgtc gggatcgccg
     1741 tgcaggacga agccgagcgt cgagcccacg acggtcagat aggcgacgta gacggcgcgc
     1801 atgacggcgt tcgccgggcg gttgaagtcc agggacagga gcgtgccacc ggggcgcagc
     1861 acccggtgaa tctccgcgag cgccggcgcg atgaccggca cgttgcggat gccatagccg
     1921 gtcgtgacga tgtcgaacga ggcggctgga aagggcagcg ccatcatgtc gccgacgacg
     1981 aagcgcgggc cgcccggtcg agtcttggcg cgcgcgatct cgatcatccg cggcgtgatg
     2041 tcgaggccga ccgtctcgac gccgcgcccg tgcagggcca gcgcgatgtc gccggtcccg
     2101 cacgcgagat ccagcgcgcg cgcggcgccg cccgccggcg ccatcgcggc caggcgcgcc
     2161 ttccatcgcc ggtcctgccc gtacgacagc accaccgtaa tcaggtcgta acgatcggcg
     2221 atcgtc
//
LOCUS       DASSYW010000778         2192 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_41673, whole genome shotgun sequence.
ACCESSION   DASSYW010000778 DASSYW010000000
VERSION     DASSYW010000778.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2192)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2192)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2192
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_41673"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..329
                     /locus_tag="VFN38_12445"
     CDS             <1..329
                     /locus_tag="VFN38_12445"
                     /inference="COORDINATES: protein motif:HMM:NF024703.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016818 - hydrolase activity, acting on
                     acid anhydrides, in phosphorus-containing anhydrides
                     [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="helicase C-terminal domain-containing protein"
                     /protein_id="HET9012622.1"
                     /translation="GLVIAKLPFRVPSEPVTAAQCEAITARGGDAFAEYMLPHASLRL
                     KQGFGRLIRTGTDRGVVVMCDPRIVTKRYGRGLLEALPPARRVIGRWETIVGRMREFY
                     EENRER"
     gene            417..1037
                     /locus_tag="VFN38_12450"
     CDS             417..1037
                     /locus_tag="VFN38_12450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HET9012623.1"
                     /translation="MPNLAPSKIVCVGRNYVAHARELGNEVPKEPLIFLKPPSSLIRS
                     GESIRLPTVSKRVEYEGEIGVVVGARLRKASAAEARKAVAGIVAANDVTARDLQKSDS
                     QWTRAKGFDTFCAVGEVATPPADLAALTVTTRVNGEVRQQGRGSEMVFDIPAILAYIS
                     AVMTLEPGDLVLTGTPEGVGTLVPGDVVEVEIAGVSRVSNPVTSDD"
     gene            1037..>2192
                     /locus_tag="VFN38_12455"
     CDS             1037..>2192
                     /locus_tag="VFN38_12455"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HET9012624.1"
                     /translation="MPPYASRFATLPEYPLAKIPQKKRELLARGVDVIDLGAGDADLD
                     PPRAAVARMERAIHEPALGRYGFGMGHVPYREAVSAWMQQRFGVRFDPMTEIVPLIGS
                     KEGISHLALAYLEPGAVGIIPEPGYNSYQGGTLLGSGEPYRYALRPRTNFLVELDEIP
                     EDVLRRTRILYLNYPNNPTAAIAPVEYLERVVRTCHERDILLVYDNAYSELAFDGYVP
                     PSIFEIEGAREVAIEFHSLSKTYNMTGWRCGWAAARPELAGTLAKVKSFVDTGQFMAV
                     QAAGVAALNSWAEFVPRNVAVFKERRDAAVRAFRQAGFECEVPRATMYLWIKLPEGLP
                     SAQFADRLLEEQGVVVMAGSAFGAGGEGFFRISFVTSPARIAEAAQRAGRL"
BASE COUNT          348 a          706 c          787 g          351 t
ORIGIN      
        1 gtggcctcgt gatcgccaag cttccatttc gcgtgccgag cgagccggtg accgccgcgc
       61 agtgcgaggc gatcaccgcg cgcggcggcg acgccttcgc cgagtacatg ctcccgcacg
      121 cgtcgctgcg gttgaagcag gggttcggcc ggctgattcg caccggcacc gaccgcggcg
      181 tggtcgtgat gtgcgatccc cgtatcgtga ccaagcgcta cggccggggg ctgctcgagg
      241 cgctgccgcc ggcgcgacgc gtgatagggc ggtgggaaac gatcgtcggc cgaatgcggg
      301 agttctacga agagaatcgt gaacggtgaa cggtgaaccg tgaaccgtga accgtaacgg
      361 cgtctggcag ttacggatca ccgttcaccg ttcaccgttc acctttatct tggaggatgc
      421 ccaatctcgc cccgtccaag atcgtatgcg ttggccgtaa ttacgtcgcc cacgccaggg
      481 agctcggcaa cgaggtcccg aaggaaccgc tgatcttcct caagccgccg tcgagcctga
      541 tccggagcgg ggaatccatc cggctgccaa cggtgtcgaa gcgagtggag tatgagggag
      601 agatcggcgt cgtcgtcggc gcgcgtctgc gcaaggcgag cgccgccgaa gcgcgaaagg
      661 ccgtggcggg gatcgtcgcc gcgaacgacg tgacggcgcg cgatctccag aagtcggact
      721 cgcagtggac gcgggcgaag ggattcgaca ccttctgcgc tgtcggcgag gtggccacac
      781 caccggccga tctcgccgcg ctcacggtga ccacgcgggt gaatggcgag gtccgacagc
      841 agggtcgcgg gtccgagatg gtgttcgaca ttcccgcgat cctcgcgtac atctcggcgg
      901 tcatgacgtt ggagcctggc gatctcgtcc tcacggggac gccggaaggg gtcgggaccc
      961 ttgtgcccgg cgacgtggta gaagtggaga tcgccggcgt gagccgtgtc agcaaccctg
     1021 tcaccagcga cgactagtgc cgccgtacgc ctcacgcttc gccacactcc ccgagtaccc
     1081 gctcgcgaag atcccgcaga agaagcggga gctcctcgcc aggggggtgg acgtcatcga
     1141 cctcggtgcc ggcgacgcgg acctcgatcc gcccagggcg gccgtcgcgc gcatggagcg
     1201 ggcgatccac gagcccgcgc tcgggcgata cggcttcggg atgggacacg tcccctatcg
     1261 cgaggcggtg agcgcctgga tgcagcagcg cttcggcgtg cgcttcgacc ccatgacgga
     1321 gatcgttccc ctgatcggct ccaaggaggg gatctcgcac ctcgcgctcg cgtacctgga
     1381 gcccggtgcg gtggggatca tcccggagcc cggctacaac tcgtatcagg gaggcacgct
     1441 gctcggcagc ggtgagccgt accggtacgc gttgcggccg cgcacgaact ttctcgtcga
     1501 gctcgacgag atccccgagg acgtgctgcg ccgcacgcgc atcctgtatc tcaactaccc
     1561 gaacaacccc acggcggcca tcgcgccggt ggagtatctc gagcgcgtcg tgcgcacctg
     1621 ccacgagcgg gacatcctgc tcgtctacga caacgcgtac agcgagctgg cgttcgacgg
     1681 ctacgtgccg ccgagcatct tcgagatcga gggcgcgcgc gaggtggcga tcgagttcca
     1741 ttcgctgtcc aagacgtaca acatgaccgg ctggcgctgc ggctgggccg cggcgcgccc
     1801 cgagctggcg ggcacgctcg cgaaggtgaa gtcgttcgtg gacaccggcc agttcatggc
     1861 ggtgcaggcc gccggcgtgg ccgcgctgaa cagctgggcc gagttcgtgc cgcgcaacgt
     1921 ggcggtgttc aaggagcgcc gggatgcggc agtgagagcg tttcgccagg ccgggttcga
     1981 gtgcgaggtc ccgcgcgcga cgatgtatct ctggatcaag ctgcccgaag ggctgccgtc
     2041 ggcacaattc gccgaccggc tgctcgagga gcagggtgtc gtcgtgatgg cggggtcggc
     2101 gttcggtgcg gggggtgagg ggttcttccg catctcgttc gtcacgtcgc cggcgcgcat
     2161 cgccgaggcg gcgcagcggg ccggccggct gc
//
LOCUS       DASSYW010000779         4125 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1628104, whole genome shotgun sequence.
ACCESSION   DASSYW010000779 DASSYW010000000
VERSION     DASSYW010000779.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4125)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4125)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4125
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1628104"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..858)
                     /locus_tag="VFN38_12460"
     CDS             complement(<1..858)
                     /locus_tag="VFN38_12460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HET9012625.1"
                     /translation="MSAKRLGVGFIGSGFNAKFHMLGWKGVRDADVLGVWSPNAKNAA
                     AAARYANDLDVGAAKPYKSITDMVADPAIDAIWITGPNQARIENVEELCDAVVRGKGT
                     LKGIACEKPLARNVAEAKEVLRLVKKSGLMHGYLENQVFAPQVDAGRDLIWARGAATT
                     GRPYLARAAEEHSGPHMPWFWQGKLQGGGVLNDMMCHSALVVRHLLTKPGAPLATVQP
                     KRITAHIASLKWSRPHYAKQLAKTMGKEVDYAKRPSEDFASTIIEFETADGYTVIGEA
                     STSWSFVGAG"
     gene            complement(855..1502)
                     /locus_tag="VFN38_12465"
     CDS             complement(855..1502)
                     /locus_tag="VFN38_12465"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025004.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate 2-dehydrogenase subunit 3 family
                     protein"
                     /protein_id="HET9012626.1"
                     /translation="MSDVSRRDALKLLGAVPVVGALDWSAPSLERATRMVARLHEEGA
                     EAPYKPKFFTAHEWRTVRLLADMIIPKDERSGSATDARAPEFMDFMLAKKDTSEGSRV
                     SMRGGLAWLDNEMRHRFGRDFLGASDAQRRAVLDDIAYPKKARPEFAPGVSWFSRFRS
                     NVGSAFFSSAMGWQDLRYIGNVFNPGWNGCPPEATRKLGVSYEEYDASLARSRKA"
     gene            complement(1499..3181)
                     /locus_tag="VFN38_12470"
     CDS             complement(1499..3181)
                     /locus_tag="VFN38_12470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HET9012627.1"
                     /translation="MMDTEYDVCIVGSGAGGGMAAYALTKAGARVVMLEAGGEWFASR
                     NSQMLMPAFASPRRGASTRIRPFGEFDACDGGWDIEGEPYTVASGSKFNWWRGRMLGG
                     RTNHWGRISLRFGPDDFKGKSKDGLGEDWPISYDDVAPYYDRVDDLIGVFGSREGLRN
                     HPDGNFHPAPRPRCYELLVKKTSDKLGITCIPSRLSIITKPINGRQACHYCGQCNRGC
                     SVKANFSSPDVLIAPALQTGKLTLITNAMAREVTVGKDGLATGVAYIDKKSNSDKHVR
                     AKIVVLAASACESARLLLNSRSSRFPQGLGNSSGWVGKGLTDTTGTDVAGFIPSMVDH
                     VPHNEDGVGGMHVYMPWWLDNAKLDFPRGYHIEVWGGLGQPSYGFMGGIHNYPGGGGY
                     GKSLKDDYRKYYGATIGFSGRGEMIPNADSYLDIDPTTVDQWGIPVPRFHWKWTDAEY
                     NQVKHMQETFRALIAEMGGQVFSPMPGKEQNYGISAGGQIIHELGCVQMGASPKNSVL
                     NANCQAHDCRNLFVADGGPFVTQADKNPTWTILALAWRTADYITQQRKQGAL"
     gene            complement(3185..4036)
                     /locus_tag="VFN38_12475"
     CDS             complement(3185..4036)
                     /locus_tag="VFN38_12475"
                     /inference="COORDINATES: protein motif:HMM:NF013429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase"
                     /protein_id="HET9012628.1"
                     /translation="MQTRREFLGTLGIGALGAAALACTRSNGQPATPPTRMPLGIQLY
                     TLRSLLERDFDGTLASVAAIGYREVEFAGYYNRTPAQVRELLARTGLSAPSAHLPLPA
                     SDDAWARALADAKAVGHEWAVIPWLDQSLRRTPDDWARFADRLNHLAPMAKSAGLRFG
                     YHNHDFELASSGSGTFLDLLLTRTDPQLVSFEMDVYWVTKAGADPLALLAKYPGRFPL
                     LHLKDATAAPERRMVDVGSGTIGWPALLTAARGQGLQHAFVEHDQPADPLASARASYT
                     YLSTQGF"
BASE COUNT          550 a         1390 c         1502 g          683 t
ORIGIN      
        1 gccggcgccg acgaagctcc acgaggtgga ggcctcgccg atcacggtgt agccgtcggc
       61 cgtctcgaac tcgatgatcg tgctggcgaa gtcctcgctc ggccgcttcg cgtagtccac
      121 ctccttgccc atcgtcttcg cgagctgctt ggcgtagtgc gggcggctcc acttgaggct
      181 cgcgatgtgg gccgtgatgc gcttcggctg cacggtggcg aggggcgcgc ccggcttcgt
      241 gaggaggtgc cgcacgacga gcgccgagtg gcacatcatg tcgttcagca cgccgccgcc
      301 ctggagcttg ccttgccaga accagggcat gtgcggtccg ctgtgctcct cggccgcgcg
      361 ggcgagatag ggacgcccgg tggtggccgc gccgcgcgcc cagatgaggt cgcggccggc
      421 gtccacctgc ggtgcgaaca cctggttctc caggtagccg tgcatcagcc ccgacttctt
      481 caccaggcga agcacctcct tcgcctcggc gacgttgcgg gcgagaggct tctcgcaggc
      541 gatccccttc agcgttccct tgccgcgcac caccgcgtcg cacagctcct ccacattctc
      601 gatgcgcgcc tggttcgggc cggtgatcca gatcgcgtcg atggccgggt cggccaccat
      661 gtcggtgatc gacttgtacg gcttcgccgc gccgacgtcg aggtcgttgg catagcgcgc
      721 cgcggcggcg gcgttcttcg cgttggggct ccagacgccc agcacgtcgg cgtcgcgcac
      781 tcccttccat cccagcatgt ggaacttcgc gttgaagccg cttccgatga agccgactcc
      841 cagtcgtttc gcgctcatgc cttgcggctc cgggccaggg acgcgtcgta ctcctcgtag
      901 ctcaccccca gcttcctggt ggcctcgggc ggacagccgt tccagccggg gttgaacacg
      961 tttccgatgt agcgcaggtc ctgccagccc atggcgctgg agaagaacgc cgagccgacg
     1021 ttggagcgga agcggctgaa ccagctcacc ccgggcgcga actccggcct ggccttcttc
     1081 ggatacgcga tgtcgtcgag cacggcgcgg cgctgcgcgt cggaagcgcc caggaagtcg
     1141 cggccgaacc ggtggcgcat ctcgttgtcg agccaggcga ggccgccccg catgctcacg
     1201 cgcgagccct cgctggtgtc cttcttggcg agcatgaagt ccatgaactc cggcgccctg
     1261 gcgtcggtgg cgctgccgga gcgctcgtcc ttggggatga tcatgtcggc gagcaggcgc
     1321 accgtgcgcc actcgtgcgc ggtgaagaac ttcggcttgt acggcgcctc cgccccctcc
     1381 tcgtgcaggc gcgccaccat gcgcgtcgcc cgctcgaggc tgggcgcgct ccagtcgagc
     1441 gcgccgacga cgggaacggc gccgagcagc ttgagtgcgt cgcggcgtga cacgtcgctc
     1501 atagggcccc ctgcttccgc tgctgcgtga tgtagtcggc cgtgcgccag gcgagggcga
     1561 ggatcgtcca cgtcgggttc ttgtcggcct gcgtgacgaa cggcccgccg tcggcgacga
     1621 acaggttccg gcagtcgtgc gcctggcagt tggcgttgag cacggagttc ttcgggctcg
     1681 cgcccatctg cacgcacccc agctcgtgga tgatctggcc gccggcggag atgccgtagt
     1741 tctgctcctt ccccggcatc gggctgaaca cctgcccgcc catctcggcg atgagtgcgc
     1801 ggaaggtctc ctgcatgtgc ttcacctggt tgtactcggc gtcggtccac ttccagtgga
     1861 agcgcggcac cgggatgccc cactggtcca cggtggtggg atcgatgtcg aggtacgagt
     1921 cggcgttggg gatcatctcg ccgcggccgc tgaagccgat ggtcgccccg tagtacttgc
     1981 ggtagtcgtc cttgagcgac ttcccgtagc cgccgccgcc ggggtagttg tggatgccgc
     2041 ccatgaagcc gtacgacggc tggcccagcc cgccccacac ttcgatgtga tagccgcgcg
     2101 ggaagtcgag cttcgcgttg tccagccacc acggcatgta cacgtgcatg ccgcccaccc
     2161 cgtcctcgtt gtgcggcacg tggtcgacca tggacgggat gaagccggcg acgtcggtgc
     2221 ccgtggtgtc ggtgagcccc ttccccaccc agccggagga attaccgagt ccctgcggga
     2281 agcgcgacga gcgggaattg agcagcagcc gcgccgactc gcacgcgctg gcggcgagga
     2341 cgacgatctt cgcgcgcacg tgcttgtcgc tgttcgactt cttgtcgatg taggcgacgc
     2401 cggtcgcgag gccgtccttg ccgaccgtga cctcgcgggc catcgcgttg gtgatcagcg
     2461 tcagcttccc cgtctggagc gccggcgcga tgaggacgtc ggggctggag aagttggcct
     2521 tcaccgagca gccgcggttg cactggccgc agtagtggca ggcctgccgc ccgttgatcg
     2581 gcttggtgat gatggacagg cgcgacggga tgcaggtgat gccgagcttg tcgctcgtct
     2641 tcttcaccag cagctcgtag cagcggggcc ggggcgcggg gtggaagttg ccgtcggggt
     2701 ggttgcgcag cccctcgcgg ctgccgaaca cgccgatcag gtcgtcgaca cggtcatagt
     2761 acggcgcgac gtcgtcgtac gagatcggcc agtcctcgcc gagtccatcc ttgctcttcc
     2821 ccttgaagtc gtcggggccg aagcgcagtg agatgcggcc ccagtggttc gtgcggccgc
     2881 cgagcatgcg gccgcgccac cagttgaact tggagcccga ggccacggtg tacggctcgc
     2941 cctcgatgtc ccagccgccg tcgcaggcgt cgaactcgcc gaaggggcgg atgcgcgtgg
     3001 aggcgccgcg gcgcggcgag gcgaaggcgg gcatgagcat ctgcgagttc cggctggcga
     3061 accattcgcc cccggcctcg agcatcacga ccctggcccc cgccttcgtg agcgcgtagg
     3121 cggccatgcc accgccggcg cccgacccca cgatgcagac gtcgtactcg gtgtccatca
     3181 tctctcagaa gccctgcgtg gagaggtacg tgtagctggc gcgcgcggag gcgagggggt
     3241 cggcgggctg gtcgtgctcg acgaaggcgt gctggaggcc ctggccgcgc gccgccgtca
     3301 gcagcgcggg ccagccgatc gtcccgctgc cgacgtccac catgcggcgc tcgggggcgg
     3361 cggtggcgtc cttcaggtgc agcaggggga agcggccggg atacttcgcg aggagggcca
     3421 gcgggtccgc gcccgccttc gtcacccagt agacgtccat ctcgaagctc acgagctgcg
     3481 ggtcggtgcg cgtgagcagg aggtcgagga aggtgccgct gccgctggac gcgagctcga
     3541 agtcgtgatt gtggtagccg aaccgcagcc ccgcgctctt cgccatcggc gccaggtggt
     3601 tcagccggtc ggcgaagcgc gcccagtcgt cgggggtgcg gcgcagcgac tggtcgagcc
     3661 aggggatgac ggcccactcg tggcccaccg ccttcgcgtc ggcgagggcg cgggcccagg
     3721 cgtcgtccga cgccgggagg gggagatggg ccgacggcgc cgagaggccg gtgcgggcca
     3781 gcagctcgcg cacctgggcc ggcgtgcggt tgtagtagcc ggcgaactcc acctcccggt
     3841 agccgatggc ggccacgctg gcgagggtgc cgtcgaagtc gcgctcgagg agcgagcgga
     3901 gagtgtagag ctggatgccg aggggcatcc gggtgggcgg cgtggcgggc tgcccgttgg
     3961 acctcgtgca ggcgagggcc gccgcgccga gcgcgccgat gcccagggtg ccgaggaact
     4021 cgcgcctggt ctgcatgccc gtgaaggtgc gacgaggggg gtcgggtcgc cagtatcggg
     4081 gcgggcgatg aggccggtgc ccgcgcgggc ggggcgcccc caccg
//
LOCUS       DASSYW010000780         2318 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_620870, whole genome shotgun sequence.
ACCESSION   DASSYW010000780 DASSYW010000000
VERSION     DASSYW010000780.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2318)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2318)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2318
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_620870"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            242..1489
                     /locus_tag="VFN38_12480"
     CDS             242..1489
                     /locus_tag="VFN38_12480"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HET9012629.1"
                     /translation="MPAQPASLNPFRVVIRHRNFRIFLIGQTLSLIGTWMQTMAQGWL
                     ALELTNSPFLVGLVATATSIPILFFTMPAGVLVDRSDKLRLVRIAQGAYLLEATALWA
                     LTATHRITIGSLLGLAFLSGLIASIEIPARQSMFIDLVGRDDLPEAIALNSSGFNLAR
                     VVGPGIAAAVIANLGIAWCFFLNAVSFVAVLAGLFMIVLPAHKPHPGHARPWIGVQVA
                     LRYMGETPRVRALMIMVTVYSILGVPVLALMPVVAREMFHLDAAGYGLLLSFLGVGGL
                     VGALSLAAAGYRVSRTRLLVVASMIWPALLILFSLARTPALGYALLLGIGCTMILNGA
                     IANGLLQQIVPNELRGRMMAAYGLVVVGLAQVVGAFSAGALADLAGVRVTIAGAAAVM
                     LLYGMWAFFRRPELRTLEDASPP"
     gene            complement(1493..2140)
                     /locus_tag="VFN38_12485"
     CDS             complement(1493..2140)
                     /locus_tag="VFN38_12485"
                     /inference="COORDINATES: protein motif:HMM:NF024587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytidylate kinase-like family protein"
                     /protein_id="HET9012630.1"
                     /translation="MPLITVSRQFGSGGSEVAERVARALDWHLYDNAVVDEVARRLGM
                     PPEEVSAREERVPSLVERMATAMALGAPEMMPMVGDLAAQPSEERMVLMTRRVIEDAV
                     RAGPVVLVGRGAQCMLASRTDALHVFCYAPFDELVRYAVEVLDVPFPEAGKKVTEMNR
                     HREEYVKHHFKRDWRDLANYDLCVNTARLGLDGSADLVTRLARERFGVTQVNEDL"
BASE COUNT          299 a          859 c          769 g          391 t
ORIGIN      
        1 gcctcgagcg agcggtcgcc ggggtcctcg aagcccatgc cgtagtaggg ctgcccctgg
       61 cccccggcga agcccgactg gagcaggaag tcggcgagct tgtccagcag cgactggaga
      121 tcgaccgcgt cggccatctc cggcgagaac ttgctgtagg tatgaaagcg catggcgtgt
      181 ccccctgctt cactaatacc tgtccgcacg ccggagtgcc acccggctct atatttcgcc
      241 cgtgcccgcc caaccggcct cgctcaatcc gttccgcgtc gtcatccgtc accggaactt
      301 ccggatcttc ctgatcggcc agacgctctc gctgatcggg acgtggatgc agacgatggc
      361 gcagggatgg ctggcgctcg agctcacgaa cagcccgttc ctggtcgggc tcgtcgccac
      421 cgcgacctcc atcccgatcc tcttcttcac catgccggcg ggcgtgctgg tggatcgctc
      481 ggacaagctg cggctcgtgc gcatcgcgca gggcgcctac ctgctcgagg cgacggcgct
      541 ctgggcgctc accgccaccc accgtatcac gatcggctcg ctgctcgggc tcgccttcct
      601 gagcggcctg atcgcgtcga tcgagatccc ggcgcggcag tcgatgttca tcgatctcgt
      661 ggggcgcgac gacctccccg aagcgatcgc gctcaactcc agcggcttca acctcgcgcg
      721 cgtggtgggt cccggcatcg cggcggcggt catcgcgaac ctcggcatcg cgtggtgctt
      781 cttcctcaac gcggtgagct tcgtggcggt gctggccggg ctcttcatga tcgtgctgcc
      841 cgcgcacaag ccgcatcccg gccatgcgcg gccgtggatc ggcgtgcagg tggcgctccg
      901 ctacatgggc gagacgccgc gggtgcgcgc cctgatgatc atggtgacgg tgtattccat
      961 cctcggcgtc cccgtgctcg cgctgatgcc ggtggtggcg cgggagatgt tccacctcga
     1021 cgcggcgggg tacggactgc tcctctcctt cctcggcgtc ggcgggctcg tcggcgcgct
     1081 gtcgctggcg gcggccggat accgcgtgtc gcgcacccgg ctcctcgtcg tcgcctcgat
     1141 gatctggccg gcgctgctca tcctcttctc gctcgcgcgc acgccggcgc tgggctacgc
     1201 gctcctgctc ggcatcggct gcacgatgat cctcaacggc gcgatcgcca acggcctgct
     1261 ccagcagatc gtgcccaacg agctgcgcgg acggatgatg gcggcgtacg gcctggtcgt
     1321 ggtcgggctc gcgcaggtgg tcggcgcctt ttccgccggc gcgctggccg acctggccgg
     1381 ggtgcgcgtc acgatcgccg gcgcggcggc cgtgatgctg ctctacggca tgtgggcgtt
     1441 cttccggcgt ccggagctgc gcacgctgga ggacgcgagc ccgccctgag cgtcagaggt
     1501 cctcgttgac ctgcgtgacc ccgaaccgtt cgcgcgccag ccgcgtcacc aggtcggccg
     1561 agccgtcgag gccgaggcgg gcggtgttca cgcagaggtc gtagttcgcg aggtcgcgcc
     1621 agtcgcgctt gaagtggtgc ttcacgtact cctcgcggtg gcggttcatc tccgtcacct
     1681 tcttccccgc ctccgggaag gggacgtcca gcacctccac cgcgtagcgc accagctcgt
     1741 cgaacggcgc gtagcagaac acgtgcagcg cgtcggtgcg cgacgcgagc atgcactgcg
     1801 cgccgcgtcc caccagcacg accgggccgg cgcgcacggc atcctcgatc acccggcgcg
     1861 tcatcaacac catccgctcc tcgctcggct gtgccgcgag gtcgcccacc atcggcatca
     1921 tctccggggc gccgagggcc atcgccgtgg ccatgcgctc cacgagcgag gggacgcgct
     1981 cctcgcgtgc cgacacttcc tccggcggca ttccgaggcg acgcgcgact tcgtccacca
     2041 cggcgttgtc gtacaggtgc cagtccagcg cacgagccac gcgctccgcc acctccgagc
     2101 cgcccgagcc gaactggcgc gacacggtga tgagcggcat cagcggatcg gcgagatcgt
     2161 gcgcacccgc acctgctcga cgatctcgaa gccgagcgca tcccacgcgc gctcggcagc
     2221 ctcgcttccg gccacgttgt gcaggcgcat ctggtccagc ccgcccgccc ggctccaacg
     2281 ctcgacctcg gccatgagcg cgcgcagcac gccgcggc
//
LOCUS       DASSYW010000781         2009 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1044499, whole genome shotgun sequence.
ACCESSION   DASSYW010000781 DASSYW010000000
VERSION     DASSYW010000781.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2009)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2009)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2009
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1044499"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2009
                     /locus_tag="VFN38_12490"
     CDS             <1..>2009
                     /locus_tag="VFN38_12490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012631.1"
                     /translation="ITESGVTLGTPTNMSPEQSVGDQAVDSRSDIYSLAVVVYEMLAG
                     APPFTGPNPRAIMARRLTGTPPPLAPLRPELPPAVEPAIARALARQPADRFDTAADFA
                     VTLCGRGEEPPPEPEEPAPTARRPWRRYVAAAALAIPLLVGAVLGARRALRRDAPPPS
                     DQQMLVVLPFRNLGDSADAYFADGLTEELTSRLASVGGLRVISRTSAEQYRTSTRPLK
                     EIGAELGAGYVLEGSVHLDHGGTGASRVRVRPRLISVADDSQLWSEPYEVELTEVFRV
                     QSEIAERVSRSLHIALAAPEREVLAAAATRDPVAYDFYLRGNDYLGRSNQEADLASAA
                     SLYTQAVEADPGFAAAWAKLARCHTQIYWHYFDRTEARLTMAKTALDSAVRLAPGQPE
                     THTAMGFYRYWVLLDYEGAIREFEAALRLQPSNSALLQAIGYVERRRGRWEESLGRFV
                     EALRYDPKSGQRSFDVGDNYLSLHMFPEADHYLERATTLSPDWPNPYIYRAWLHVAWR
                     GDLARGREIIAQGLSRIEPGRFAVALQTGDRISASLVTADSAFWPMLDGLSLATFAGD
                     TVRYHLLKAETDAFRRNLSAERAHGDSARLLIEPRLKLMPNDAKILATLALAYMHLGR
                     HADAIRSGERAAGLLPLENDAVSGPYVHAYLARVYASAGRYDKAI"
BASE COUNT          294 a          748 c          690 g          277 t
ORIGIN      
        1 ggatcaccga gtccggcgtc acgctcggga cgcccaccaa catgagcccg gagcagtcgg
       61 tgggcgacca ggcggtggac tcccgcagcg acatctattc gctcgccgtc gtggtgtacg
      121 agatgctggc cggcgcgcca ccgttcacgg ggcccaaccc ccgagcgatc atggcgcgcc
      181 ggctgactgg gacgccgccc ccgctcgcgc cgctccgtcc ggagcttcca ccggcggtgg
      241 agccggcgat cgcgcgcgcc ctcgcccggc agcccgccga ccggttcgac acggcggccg
      301 acttcgcggt gacgctgtgc ggccgcggcg aggagccgcc ccccgagccc gaagagcccg
      361 cgccaaccgc gcggcgtccc tggcgccggt atgtcgccgc cgcggcgctg gcgatcccgc
      421 tcctcgtcgg cgccgtgctc ggagcgcgac gcgcgttgcg ccgggacgcg ccgccgccat
      481 cggatcagca gatgctggtg gtgctgccgt tcagaaacct cggcgactcg gccgacgcct
      541 acttcgccga cggccttacc gaggagctca ccagccggct cgccagcgtt ggcgggctca
      601 gagtcatcag ccgcaccagc gcggagcagt accggacgag cacgcgccca ttgaaggaga
      661 tcggcgccga gctcggcgca gggtacgtgc tcgagggaag tgtgcacctc gatcacggag
      721 gcacgggggc gagccgggtg cgagtgcggc cgcggctcat ctcggtcgcg gacgacagcc
      781 agctctggag cgagccgtac gaggtcgagc tcaccgaggt cttccgggtg cagtccgaga
      841 tcgccgagcg ggtgagccgc tcgctgcaca tcgcccttgc cgcgccggag cgcgaagtgc
      901 tcgccgccgc cgccacccgc gatccggtcg cctacgattt ctacttgcgc ggcaacgact
      961 atctcgggcg gagcaaccag gaggcggacc tggccagcgc ggcgagcctc tacacccagg
     1021 cggtcgaagc ggaccccggc ttcgccgcgg cgtgggccaa gctcgcgcgg tgccacaccc
     1081 agatctactg gcactacttc gaccgcaccg aggcccggct caccatggcc aagaccgcac
     1141 tggattccgc ggtgcgcctg gccccgggac agcccgagac ccatacggcg atgggcttct
     1201 accggtactg ggtcctgctc gactacgagg gcgcgatccg ggaattcgag gccgcgcttc
     1261 ggctccagcc gagcaacagc gccctgctcc aggcgatcgg ctatgtggag cgccgccgcg
     1321 ggcgctggga ggagtcgctc gggcggttcg tggaggcgct gcgctacgac ccgaagtccg
     1381 ggcagcgcag cttcgacgtg ggggacaact atctctcgct ccacatgttt cccgaagcgg
     1441 accactacct cgagcgggcc acgacgcttt cgcccgactg gcccaacccc tacatctacc
     1501 gcgcctggct ccacgtggcc tggcgcggcg acctggcgcg gggacgcgag atcatcgccc
     1561 agggtctctc gcgcatcgag cccgggcgat tcgcggtggc gctgcagacg ggcgaccgta
     1621 tctcggcctc gctggtgacg gcggacagcg ccttctggcc catgctggac ggcctctcgc
     1681 tggcgacctt cgccggcgac accgtgcgct atcacctgct caaggccgag accgacgcct
     1741 tccggcgcaa cctctccgcc gagcgggcgc acggcgactc cgcgcgcctg ctgatcgagc
     1801 cccggctgaa gctgatgccg aacgatgcca agattctggc gacgctcgcg ctcgcctaca
     1861 tgcacctggg ccgccacgcc gatgcgatcc gcagcggcga gcgggcggca gggctgcttc
     1921 cactggagaa tgacgcggtc tccggcccct acgtccacgc ctatctggcg agggtctacg
     1981 cctccgcagg acgctacgac aaggccatc
//
LOCUS       DASSYW010000782         2451 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1757023, whole genome shotgun sequence.
ACCESSION   DASSYW010000782 DASSYW010000000
VERSION     DASSYW010000782.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2451)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2451)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2451
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1757023"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(70..1068)
                     /locus_tag="VFN38_12495"
     CDS             complement(70..1068)
                     /locus_tag="VFN38_12495"
                     /EC_number="2.7.7.87"
                     /inference="COORDINATES: protein motif:HMM:TIGR00057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0061710 - L-threonylcarbamoyladenylate
                     synthase [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase"
                     /protein_id="HET9012632.1"
                     /translation="MEAPAVDTARIAQAVGLLKQGGLVAVPTETVYGLAADASNEAAV
                     RAMFAAKGRPADHPVIVHVADAGAIDAWAREVPDSARALAAAFWPGPLTLVLKRSPKA
                     LDVVTGGQDTVGLRCPAHPWARALLQAFGGAVAAPSANSFGRLSPTAAEHVRVDLGEK
                     PAGKVDMILDGGACPIGIESTIVDLSGDRPTLLRPGSITRLALEQVLGGPVAEPGGDA
                     PRASGRLERHYAPRTPLEVVPVDRLGSRLAALFHLRVAVLAPAAVLQTLRAQPAFRLS
                     APEDPVAYARDLYANLHRLDEAGAERIVVAAPPAGGEWDAIHDRLKRARSDSRPPG"
     gene            complement(1070..2230)
                     /locus_tag="VFN38_12500"
     CDS             complement(1070..2230)
                     /locus_tag="VFN38_12500"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: protein motif:HMM:NF004677.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004638 - phosphoribosylaminoimidazole
                     carboxylase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HET9012633.1"
                     /translation="MSGAAIPPGSWLGLLGGGQLGRMFCMAAQSLGFRVCVLDPGSDS
                     PAGAVADDHIATDYLDRTGLAELAARCRAATTEFENVPAAALSFLAEHCNVSPEAASV
                     AIAQDRIAEKRFVASCGIDVARHAVIEREEDFAALDPALLPGILKSARLGYDGKGQER
                     VATVDAARAAWGRMGRVACVLEQRLPLQLEVSVVVCRGRDGATATFPVSENEHRGGIL
                     AVSIAPARVDEALAQRARAAAVTLAGHMNYVGVLCVEFFVLADRQLLVNEIAPRPHNS
                     GHYTIDACVTSQFEQQARVMAGLPLGDTTQALPSVMLNILGDVWYDGETQREPDWSSV
                     AAVPGAKLHLYGKREARRGRKMGHVTCVASTLDEALARANRVASVLGIEGAR"
     gene            complement(2248..>2451)
                     /locus_tag="VFN38_12505"
     CDS             complement(2248..>2451)
                     /locus_tag="VFN38_12505"
                     /inference="COORDINATES: protein motif:HMM:NF012934.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AIR carboxylase family protein"
                     /protein_id="HET9012634.1"
                     /translation="GEDSLLSIVQMPRGVPVATFAIGEAGASNAALFAIAMLATGDGD
                     LAMKLAQFRATQTEKARNMTLPL"
BASE COUNT          348 a          892 c          880 g          331 t
ORIGIN      
        1 gaaagagtgt tcgtgttctg gagttcttct ggcgcggccg atttcgggcc gcacttgact
       61 ctaccgcaat cagccgggag ggcgactgtc cgaccgggcc cgtttgagcc gatcgtgtat
      121 ggcgtcccac tcgccaccgg cgggcggtgc cgcgacgacg atgcgttcgg cccccgcctc
      181 gtcgagccgg tgcaggttgg cgtagaggtc cctggcgtac gccaccgggt cttcgggggc
      241 ggagagccgg aaggccggct gtgcacgcag cgtctgcaga accgcggccg gcgcgagcac
      301 ggcgacgcgc aggtgaaaca gggcggccag ccggctgccg aggcgatcga ccggcacgac
      361 ctcgagcggc gtgcgcggcg cgtaatgccg ttcgagtcgt cccgaagcac gcggcgcgtc
      421 gccaccaggt tccgcgaccg ggccgccgag tacctgttcg agcgcgagtc gcgtgatgga
      481 acccggccgc agcagggtgg gccggtcgcc ggacagatcg acgatggtgg actcgatgcc
      541 gatcgggcag gcaccgccgt cgaggatcat gtccaccttg cccgccggct tctcgccgag
      601 gtccacgcgc acgtgttccg cggcggtcgg gctcagccgc ccgaaactgt ttgcgctcgg
      661 cgccgccacc gcgccaccga aggcctgcaa caacgcgcgc gcccacggat gcgcggggca
      721 gcgcaggccg accgtgtcct gcccgcccgt gacgacgtcg agggccttcg gactgcgctt
      781 caggaccagc gtcagcggcc cgggccagaa ggcggcggcg agcgcgcgcg ccgagtcggg
      841 gacctcgcgc gcccaggcgt cgatggcgcc cgcgtcggcg acgtgcacga tcaccggatg
      901 atcggccggg cgccccttgg cggcgaacat cgcgcgcacc gcggcttcgt tgctcgcgtc
      961 cgcggccagc ccgtacacgg tttccgtcgg cacggcgacg agaccgccct gcttcagcag
     1021 cccgacggcc tgcgcgatcc gcgcggtgtc gacggcaggg gcctccatgt cagcgcgcgc
     1081 cttcgatgcc gaggacggac gcgacgcggt tggcacgcgc gagcgcttcg tcgagcgtcg
     1141 aggccacgca cgtcacgtga cccatcttgc gtccgcgccg cgcctcgcgc ttgccgtaca
     1201 ggtgcagctt cgcgcccggc accgcggcca cggacgacca gtcgggctcg cgctgcgttt
     1261 cgccgtcgta ccagacatcg ccgaggatgt tcagcatcac cgacggcagc gcctgcgtgg
     1321 tgtcgcccag cggcaggccc gccatcacgc gcgcctgctg ctcgaactgg ctggtgacgc
     1381 aggcatcgat ggtgtagtgg ccggagttgt gcggacgcgg cgcgatctcg ttcaccagca
     1441 actgccggtc ggcgagcacg aagaactcga cgcacagcac gccgacgtag ttcatgtgcc
     1501 cggcgagtgt caccgccgcg gcgcgcgcac gctgcgcgag cgcctcgtcg acgcgcgcgg
     1561 gtgcgatgga cacggcgagg atgccgccgc ggtgctcgtt ctcggagacg ggaaacgtgg
     1621 ccgtggcgcc gtcgcgcccg cggcacacca cgacggacac ctcgagctgc agtggcaggc
     1681 gctgctccag cacgcaggcc acacggccca tccgccccca ggcggcgcgg gcggcgtcga
     1741 ccgtggccac ccgctcctgc cccttgccgt cgtagcccag gcgcgcggac ttcaggatgc
     1801 cgggcagcag cgccggatcg agcgcagcga agtcctcctc ccgctcgatc accgcgtgcc
     1861 gcgcaacgtc gataccgcac gacgcgacga agcgcttctc ggcgatccgg tcctgggcga
     1921 tcgcgacgct cgcggcttcc gggctgacgt tgcagtgctc ggcaaggaac gaaagagccg
     1981 cggccgggac gttctcgaat tcggtcgtcg cggcgcggca gcgcgcggcg agttccgcca
     2041 gaccggtccg atcgaggtag tccgtcgcga tgtgatcgtc agccacggcg ccggctgggc
     2101 tgtcggagcc cgggtccagc acgcagaccc ggaagccgag cgactgcgcc gccatgcaga
     2161 acatgcggcc cagctgcccg ccgcccagca gtcccagcca ggagccggga ggtatcgccg
     2221 cgccgctcat gccgcgccca tccgcgctca gagcggcagg gtcatgttgc gcgccttctc
     2281 cgtctgcgtg gcgcggaact gggcgagctt catcgcgagg tcgccatccc cggtcgcgag
     2341 catcgcgatc gcgaagagcg ccgcgttgga ggcgccggcc tcgccgatgg cgaacgtcgc
     2401 caccggaacg ccgcgcggca tctgcacgat cgacagcagc gaatcctcgc c
//
LOCUS       DASSYW010000783         2579 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1208524, whole genome shotgun sequence.
ACCESSION   DASSYW010000783 DASSYW010000000
VERSION     DASSYW010000783.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2579)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2579)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2579
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1208524"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..501)
                     /locus_tag="VFN38_12510"
     CDS             complement(<1..501)
                     /locus_tag="VFN38_12510"
                     /inference="COORDINATES: protein motif:HMM:NF013691.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HET9012635.1"
                     /translation="MSVAQSILDKVPHLPESPGVYLWKDGDGKVLYVGKAKRLRSRVR
                     SYVGNDHRESVKTRALMQQVEALDTILVPTEAHALVLEANLIKEYKPRFNIALRDDNS
                     YPYIKVTVQEPFPRVWVTRRLQNDGARYFGPYTDVGAMRRALDVVKRLFTVRSCNFDM
                     PKQMPER"
     gene            complement(540..2150)
                     /gene="murJ"
                     /locus_tag="VFN38_12515"
     CDS             complement(540..2150)
                     /gene="murJ"
                     /locus_tag="VFN38_12515"
                     /inference="COORDINATES: protein motif:HMM:TIGR01695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0034204 - lipid translocation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HET9012636.1"
                     /translation="MTDPLADPIAEPITEPPRSSGRSSALVAAGIFLSRLLGLLRQSL
                     IARYLGAGLVADAFNGAFRLTNFLQNLFGEGALSASFIPVYANALARNEEEEADRIAG
                     AVGAILALVVAIIVLLGILAAPLVVQLVVGGFTGEKLELTIRLTRILFPGAGIFVLSA
                     WCLGILNSHRRFFLSYVAPVFWNLAMIGALVAFGPRRGEVELAVILAWASVAGAVLQM
                     AVQLPTVFRLLHRPRFRLDLAYPPVREAVRNFLPAFVSRGVVQLSGFIDIWLASHIPV
                     NGVVTLLQNAQTIYVLPISLFGMSVSAAELPEMSRDTGSGPAAFDRLRVRMNAALPRV
                     AFFVVPSAVGFFVLGEAIAGVLLQYGKFTHTDTLRTWAILAGSAVGLLASALGRLYSS
                     TFYALRDTRTPLRFAIARVLLTGVLGYLFAFPLPRLLGLPAWTGAAGLTASAGIAGWV
                     EFLLLRRAITARIGRTGIPPAALVRLWGAALLAGGAGWGVMQLVDPAHHLVRGIAAIV
                     AFALVYGLATLALGVPEATALVRRARRR"
     gene            complement(2147..>2579)
                     /gene="bshC"
                     /locus_tag="VFN38_12520"
     CDS             complement(2147..>2579)
                     /gene="bshC"
                     /locus_tag="VFN38_12520"
                     /inference="COORDINATES: protein motif:HMM:NF021586.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="bacillithiol biosynthesis BshC"
                     /protein_id="HET9012637.1"
                     /translation="DAPEALEGRLARAAMSDETVRVLGALRESIALLPDALGDESEEL
                     RVGPAVVGATQSLQHRVDRLERRLVAAVKRRESARMRDVATLRAALRPRGVRQERLLN
                     AIPIFARHGSGLLAEMCRAARPHAASLLEPARLPRATGATR"
BASE COUNT          413 a          911 c          944 g          311 t
ORIGIN      
        1 gcgctcgggc atctgcttcg gcatgtcgaa gttgcacgac cgcacggtga agagccgctt
       61 caccacgtcg agggcgcggc gcatcgcgcc gacgtcggtg tacggcccga agtagcgcgc
      121 gccgtcgttc tggagccggc gggtgaccca cacgcgcggg aagggctcct ggacggtgac
      181 cttgatgtag gggtacgagt tgtcgtcgcg cagcgcgatg ttgaagcgcg gcttgtactc
      241 cttgatcaag ttcgcttcca gcacgagcgc gtgcgcctcg gtgggcacga gaatcgtgtc
      301 gagggcctcg acctgctgca tgagcgcacg cgtcttcacg ctctcgcgat ggtcgttgcc
      361 gacgtagctc cgcacgcgcg accgcagccg cttcgccttc ccgacgtaca gcaccttccc
      421 gtccccgtcc ttccagagat agacgccggg ggattcgggg aggtgcggaa ccttgtcgag
      481 gatcgactgc gcgacggaca tggtgaatta taccccgccg gcgcggccgg cgttcgtgct
      541 cagcggcgtc tcgcgcggcg cacgagcgcc gtcgcttccg gcaccccgag cgcgagcgtg
      601 gccaggccgt acacgagcgc gaaggcgacg atcgccgcga tcccgcggac caggtggtgc
      661 gccggatcga cgagctgcat gacgccccac cccgccccgc cggccagcag cgccgcgccc
      721 cacaggcgga cgagcgccgc cggcgggatc cccgtgcggc cgatgcgggc cgtgatggca
      781 cggcgcagca gcaggaactc cacccagccg gcgatccccg ccgacgccgt gaggcccgcg
      841 gccccggtcc acgcgggcag gccgagcagc cgcggcagcg ggaacgcgaa caggtagccg
      901 agcacgccgg tgaggagcac gcgggcgatc gcgaaccgga gcggcgtccg cgtgtcgcgc
      961 aacgcgtaga aggtggagga atacaggcgg cccagcgcgc tggcgagcag ccccaccgcg
     1021 gagccggcga ggatcgccca cgtccgcagg gtgtcggtgt gggtgaactt gccgtactgc
     1081 aggagcacgc cggcgatggc ctcgccgagc acgaagaacc cgaccgccga cggaaccacg
     1141 aagaaggcga cgcgcggcag cgccgcgttc atccggaccc gcagccgatc gaacgccgcc
     1201 ggcccggacc cggtgtcgcg cgacatctcg ggcagctcgg cggccgacac cgacatcccg
     1261 aagaggctga tcggcagcac gtatatcgtc tgcgcgttct ggagcagcgt caccacgccg
     1321 ttgacgggaa tgtggctcgc cagccagatg tcgatgaagc cgctgagctg caccaccccg
     1381 cggctcacga acgcgggcag gaagttgcgc acggcctcgc gcaccggcgg ataggcgagg
     1441 tcgagccgga agcgcggacg gtgcaggagg cggaacacgg tgggcagctg taccgccatc
     1501 tggagcaccg cgccggcgac ggacgcccag gcgaggatca ccgcgagctc cacctcgccg
     1561 cgccgcggcc cgaacgcgac gagcgcgccg atcatcgcga ggttccagaa caccggcgcc
     1621 acgtacgaca ggaagaagcg gcgatggctg ttcaggatgc cgaggcacca cgcgctcagc
     1681 acgaagatgc ccgcgcccgg gaagaggatg cgcgtgagcc ggatcgtgag ctcgagcttc
     1741 tcccccgtga agccgccgac cacgagctgc accacgagcg gcgcggcgag gatgccgagg
     1801 aggacgatga tcgcgacgac cagggcgagg atggccccga cggcccccgc gatgcggtcg
     1861 gcctcctcct cctcgtttcg tgcgagcgcg ttggcgtaga ccgggatgaa cgacgcggag
     1921 agcgcgcctt cgccgaacag gttctgcagg aagttcgtga gccggaacgc gccgttgaag
     1981 gcgtcggcca cgagcccggc ccccagatac cgcgcgatca ggctctgtcg cagcagcccg
     2041 agcagccgcg agaggaagat gcccgccgcc acgagcgcgg agctgcggcc cgagctgcgc
     2101 ggcggctcgg tgatgggctc ggcgatcggg tcggccaacg ggtcggtcat cgggttgctc
     2161 cggtcgctcg gggaaggcgc gccggctcga ggagggaggc ggcatgcggg cgggcggccc
     2221 ggcacatctc ggccaggagt ccgctgccat ggcgggcgaa gatcgggatg gcgttcagca
     2281 ggcgttcctg ccgcacgccg cgcgggcgca gcgccgcccg cagcgtggcg acgtcgcgca
     2341 tccgggccga ctcgcgacgc ttgacggcgg ctaccagccg gcgctccagc cggtccaccc
     2401 gatgctgcag cgactgcgtg gcgcccacca cggccggccc tacccggagc tcttcgctct
     2461 cgtcgcccag cgcgtcgggc aacagggcga tcgactcgcg cagcgcgccg agcacgcgca
     2521 cggtctcgtc gctcatcgcc gcgcgggcaa gccgcccttc gagggcctcc ggtgcgtcc
//
LOCUS       DASSYW010000784         3137 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1204544, whole genome shotgun sequence.
ACCESSION   DASSYW010000784 DASSYW010000000
VERSION     DASSYW010000784.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3137)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3137)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3137
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1204544"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1296)
                     /locus_tag="VFN38_12525"
     CDS             complement(<1..1296)
                     /locus_tag="VFN38_12525"
                     /inference="COORDINATES: protein motif:HMM:TIGR00368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
                     /protein_id="HET9012638.1"
                     /translation="MSGGVLASLRSAAVFGVEAYPVSVEVDVSYGLPRFDMVGLPDVI
                     VRESRDRVRAAIKNSGYEFPGHRITVNLAPADVRKGGSWFDLPIALGLLATNGDVSRR
                     SIEDTVVLGELSLDGAINAVRGVLPIAAAARRLGLARILLPPQNASEACIVTGLQVCT
                     VRSLAEAVVALNRPDAARLETWEPPAPPPDDDADLADVRGQLAPRRALEIAAAGGHNL
                     LMCGPPGAGKTMLARRLATILPPLTFDEALDCTAIHSVAGLLPAGSGLLTRRPFRAPH
                     HSISGVALVGGGPQPRPGEISLAHHGVLFLDELPEFQRHVLDLMRQPLEEGRVPIARA
                     ARTAVFPSRFMLVAAMNPCPCGFAGVERRACRCSPTHIARYHARVSGPLRDRMDLIVD
                     VPPVPASAFDDTSTNESSAAVCTRVVDARVRQWQRYGEHG"
     gene            complement(1411..>3137)
                     /locus_tag="VFN38_12530"
     CDS             complement(1411..>3137)
                     /locus_tag="VFN38_12530"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HET9012639.1"
                     /translation="STPAVVAPVAPPPVVATAPAPTPPPPAPVPVVDPIDALIADSTR
                     HFETGRREIQDGHLEAARTEFNRALELVMQFSSGPRANARLREHFDRLVERISAVEIA
                     ALAEGDGFAEQRSEPAAIDALLDTPDPANPTAETARAVQNDLASTKYDIDIPLNARVL
                     SYVELFSGRLKGYLEEGLSRGARYLPMVQEVFRAEGLPLDLAYVPLVESAFKNSALSR
                     AKARGMWQFMSGTGKENGLQYDWYIDERADPEKATRAAAKYLKTLYNQFDDWHLALAS
                     YNGGPGRVQRSMKRSGKDDFWDISASSRYLPRETRNYVPLILAAIIVARNPVQYGLEI
                     EPIVEPATDLVRLTAPADLRRIAEWIDVPVQVLQDMNPELRRWTTPVRMTDYDLTVPM
                     GTADVLSAKLADTTPEELAPLNRYTVRKGETIATIARKLKVKRADLAQANYLSEKSRL
                     DAGQQLIIPRAPTLLLASNERSEDPDEPVKAVADTGRRGSDPVEAMAAPARRPAAAPR
                     TAAARVPAAEPSRIVHRVKSGETLFSIAQKYNTSVAAVRQSNKLRGNTIKVGQRLTIA
                     VKGSSQAD"
BASE COUNT          448 a         1069 c         1144 g          476 t
ORIGIN      
        1 cccgtgctcg ccgtagcgct gccactgccg cacgcgggca tccacgaccc gcgtgcacac
       61 ggccgcggac gattcgttcg tgctcgtgtc gtcgaacgcg ctcgccggca cgggcggcac
      121 gtccacgatc aggtccatcc gatcccgcaa ggggcccgac acgcgcgcgt ggtagcgcgc
      181 gatgtgcgtg ggcgagcagc ggcaggctcg gcgctcgacg ccggcaaagc cgcacgggca
      241 cgggttcatg gccgcgacga gcatgaaccg cgacggaaag acggcggtcc gagccgcgcg
      301 agcgatgggg acacgccctt cttcgagcgg ctggcgcatc agatcgagca cgtgccgctg
      361 gaactccggc agctcgtcga gaaacagcac gccatggtgg gccaacgaga tctcgccggg
      421 ccgcggctgc ggcccgccgc caaccagtgc cacgcccgat atcgagtggt gcggtgcgcg
      481 gaacggccgc cgcgtcagca ggccgctacc ggccggcagc agacccgcga ctgagtggat
      541 ggccgtgcag tcgagcgcct cgtcgaacgt gagcggcggc agaatcgtgg cgagccggcg
      601 ggcgagcatc gtcttgccgg cgcccggcgg accgcacatc aacaggttgt ggccgccagc
      661 cgccgcgatc tcgagcgcac ggcgcggggc gagctggcca cgcacgtcgg cgaggtcggc
      721 gtcgtcatcg ggcggcggcg cagggggctc ccacgtttcg agccgggcgg cgtcggggcg
      781 attcagtgcc acaaccgctt ccgccagcga gcgcaccgtg cagacctgca ggccggtgac
      841 gatgcacgcc tcgctggcgt tctgcggcgg cagcaggatg cgcgcgagcc cgaggcgcct
      901 ggccgccgcc gcgatcggca gcacgccgcg gacggcgttg atggcgccgt cgagcgacag
      961 ctccccgagc acgacggtgt cctcgatcga gcgccgcgag acgtcgccgt tggtggccag
     1021 caggccgagc gcgatcggca ggtcgaacca cgagccgcct ttgcggacat cggccggcgc
     1081 caggttcacc gtgatgcggt ggccggggaa ttcgtagccc gagttcttga tggcggcgcg
     1141 cacgcggtcg cggctctcgc ggacgatgac gtccggcagc cccaccatgt cgaaccgcgg
     1201 gagcccgtac gacacgtcca cttccaccga gaccggatag gcctcgacgc cgaacaccgc
     1261 cgcgctgcgc aggctggcga gcacaccgcc agacactgca aacggcacga ccttctgcga
     1321 cggccggaac tcgaatgccc gacgtcgatc tgccgcgctt tctgcccgct ggcagccaga
     1381 cgagtacgca gttcttgcga ggaggtgggg ctagtcggcc tggctggagc ccttgaccgc
     1441 gatggtcagg cgctggccga ccttgatcgt gttgccgcgc agcttgttgc tctggcgcac
     1501 ggccgcgacc gaggtgttgt atttctgcgc gatggagaag agcgtctcgc cgctcttcac
     1561 gcggtggacg atccgcgagg gctccgccgc aggaacccga gcggccgcgg tccgaggcgc
     1621 tgccgcgggg cgccgggcgg gagcggccat ggcctccacc gggtcggaac ctcgtcgtcc
     1681 cgtgtcggcc accgccttga caggctcgtc cgggtcctcg ctgcgctcgt tcgaggcgag
     1741 gagcagcgtc ggcgcgcgtg ggatgatcag ctgctgcccg gcgtcgaggc gcgacttctc
     1801 ggacaggtag ttggcctgcg cgaggtcggc gcgcttcacc ttgagcttcc gggcgatcgt
     1861 cgcgatggtc tcgcccttcc ggacggtgta gcgattgagc ggcgccagct cctcaggcgt
     1921 ggtgtccgcc agcttggcgc tcagcacgtc cgccgtgccc attgggacgg tgaggtcgta
     1981 atccgtcatc cgcaccggtg tggtccaccg gcgcagctcc gggttcatgt cctgcagcac
     2041 ctgcacgggc acgtcgatcc actcggcaat gcgcctcagg tccgccggcg ccgtcagccg
     2101 caccaggtcg gtggccggct ccacgatcgg ctcgatctcg agtccgtact gcaccgggtt
     2161 cctcgccacg atgatcgcgg ccaggatgag cggcacgtag ttccgggttt cacgagggag
     2221 atagcgcgag ctggccgaga tgtcccagaa atcgtccttg ccggagcgct tcatcgagcg
     2281 ctgcacgcgg cccggaccgc cgttgtacga cgcgagcgcc aggtgccagt cgtcgaactg
     2341 gttatagagc gtcttgaggt acttggcggc ggcgcgcgtg gctttctccg ggtcggcgcg
     2401 ctcgtcgatg taccagtcgt actggaggcc gttctccttg ccggtgccgc tcatgaactg
     2461 ccacatgccg cgcgccttgg cgcgcgacaa cgcactgttc ttgaacgcgc tttcgacgag
     2521 cgggacgtag gccagatcga gcggcagccc ctccgcgcgg aagacctcct gcaccatcgg
     2581 caggtagcgc gccccgcggc tgagcccttc ttcgagatat cccttcaggc gcccgctgaa
     2641 cagctcgaca tacgagagca cccgcgcgtt gagcgggatg tcgatgtcgt acttcgtgga
     2701 cgcgaggtcg ttctggacgg cgcgggccgt ttcggcggtc ggattcgcgg ggtcgggcgt
     2761 gtcgagcagc gcgtcgatgg cggccggctc ggaccgctgt tcggcgaagc cgtcgccttc
     2821 ggccagcgcc gcgatctcga cggcgctgat gcgctccacg agacggtcga agtgctcgcg
     2881 cagccgcgca ttcgcgcgcg ggccggagct gaactgcatg acgagctcga gcgcccggtt
     2941 gaactcggtg cgggccgctt cgaggtgccc gtcctggatt tcacgccgcc cggtctcgaa
     3001 gtgccgcgtc gaatcggcga tgagcgcgtc gatcgggtcg acgacaggga ccggagccgg
     3061 tgggggaggc gtgggcgccg gcgcggtggc gacgaccggc ggcggtgcca ccggagctac
     3121 gacggcggga gtggagt
//
LOCUS       DASSYW010000785         2792 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1511820, whole genome shotgun sequence.
ACCESSION   DASSYW010000785 DASSYW010000000
VERSION     DASSYW010000785.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2792)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2792)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2792
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1511820"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..212
                     /locus_tag="VFN38_12535"
     CDS             <1..212
                     /locus_tag="VFN38_12535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012640.1"
                     /translation="SIESELALLCAVGDSLQGAPEIAARVVGVLEEVPLKMISQAASR
                     RNITVVLRQSDLPHAMQRLHEEFFG"
     gene            209..886
                     /locus_tag="VFN38_12540"
     CDS             209..886
                     /locus_tag="VFN38_12540"
                     /inference="COORDINATES: protein motif:HMM:NF017024.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008839 - 4-hydroxy-tetrahydrodipicolinate
                     reductase [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate reductase C-terminal
                     domain-containing protein"
                     /protein_id="HET9012641.1"
                     /translation="MNVLIVGYGKMGRLIDTLAAEQGIEVAGRVDEGRDEWRAADVAI
                     DFTTADALLRNFPRYLQLKMPVVIGTTGWNEHAASLRAQAGQAGLGVVASANFSIGVN
                     VFQLVVNEAARLMQSQPQYGAWIHEAHHAAKRDAPSGTAYLLRDSMVAAGFDRPIDMS
                     ATRAGTIPGIHTIGFDAASDTIELTHTARDRRGFAGGALVAAKWIRGRQGWFTMADVL
                     TSAQGPV"
     gene            915..1817
                     /gene="dapA"
                     /locus_tag="VFN38_12545"
     CDS             915..1817
                     /gene="dapA"
                     /locus_tag="VFN38_12545"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: protein motif:HMM:NF012904.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008840 - 4-hydroxy-tetrahydrodipicolinate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HET9012642.1"
                     /translation="MRTPFTGVGTALITPFVKGGALDEAAVKRLAKRQIDAGVHFLVP
                     CGTTGESPTLTHREKLRVVELVVEEAAGKVPVMAGAGGYDTREAIELSRDMEKVGANG
                     LLHVSPYYNKPTQEGQYQHFKAIAESTRLPILLYSIQGRTGVNIDASTVLRLAQIPNI
                     IGIKEASGSLVQMTDIVANTPENFLLLSGDDPITVPVMAIGGRGVISVASNEVPAELV
                     QVVELCEKGDYAAARKLQGWLLPLLTGNFVESNPAPCKAAMAAMGLCEEDVRLPLVPI
                     TPASRERVMGILQKLRLLGAAARV"
     gene            1817..2662
                     /locus_tag="VFN38_12550"
     CDS             1817..2662
                     /locus_tag="VFN38_12550"
                     /EC_number="2.3.1.117"
                     /inference="COORDINATES: protein motif:HMM:NF008808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase"
                     /protein_id="HET9012643.1"
                     /translation="MSDLADEITSLFEQGASASKQQARDAFTRLRGELSAGRVRSAEP
                     DPSSPTGWRVNAWVKQGILLGLRWGDVVDVGIGKGRWPFLDKDTLPLKPLNVSSRVRV
                     IPGGSSIRDGAYLGTGVICAPPMYINVGAYVDDFSFVDSHALVGSCAQIGKNVHLSAA
                     AQIGGVLEPVGAMPVIVEDDALVGGNCGVYEGVIVKRRAVLGSGTIVTGSTPIYDLPN
                     GVIITPAAGQPLVVPEGAVVVPGARAVTAGKGPEWGLSLSTPVIVKYRDEKTDARTEL
                     EQWIR"
BASE COUNT          437 a          926 c         1004 g          425 t
ORIGIN      
        1 tgtcgatcga gagtgagctc gcgctgctgt gcgccgttgg cgacagcttg cagggagcgc
       61 cagagatcgc cgcacgcgtc gtcggcgtgc tcgaagaggt gccgctcaag atgatctcgc
      121 aggcggcgtc gcggcgaaac atcacggtgg tgttgcggca aagcgatctg ccgcacgcga
      181 tgcagcggct gcacgaggag ttcttcgggt gaacgtcctg atcgtcggct acggcaagat
      241 gggcaggctg atcgacaccc tggcggcgga gcaggggatc gaggtggcgg ggcgggttga
      301 cgaggggcgc gacgaatggc gcgccgcgga cgtggcgatc gacttcacga ccgccgacgc
      361 gctcctgcga aactttcctc gctacctgca gctgaagatg ccggtcgtga tcggcactac
      421 cggctggaac gagcacgcgg cgtcgctgcg ggcgcaggcc gggcaggcgg ggctgggcgt
      481 ggtggcgtcg gccaacttct cgatcggcgt caacgtcttc cagctcgtcg tgaacgaagc
      541 ggcccggctg atgcagtccc agccacagta cggcgcctgg attcacgagg cccatcacgc
      601 ggccaagcgc gacgcgccgt cgggcactgc ctacctgctg cgcgattcga tggtggcggc
      661 cggattcgac cggccgatcg acatgtcggc cacgcgcgcc ggcacgattc ccggcattca
      721 caccatcggt ttcgacgccg cctcggatac gatcgagctc acccacacgg cccgcgaccg
      781 ccgcggtttc gcgggcgggg cgctcgtggc cgcgaagtgg attcgcggcc ggcaggggtg
      841 gttcaccatg gccgacgtgc tgacgtcggc gcaggggccg gtctaaagac cggcggctac
      901 gaaagaggac cgtcatgcgc actccgttca caggcgtcgg caccgcactc atcacgccct
      961 tcgtcaaggg cggcgcgctc gacgaggcgg cggtcaagcg tctggcgaaa cggcagatcg
     1021 acgcgggcgt ccacttcctg gtgccgtgcg gcaccacggg cgagtcgccc acgctgacgc
     1081 accgcgaaaa gctgcgcgtc gtggagctcg tggtcgaaga agccgccggc aaggtgcccg
     1141 tgatggcggg cgcgggcggc tacgacacgc gtgaagcgat cgagctctcg cgcgacatgg
     1201 agaaggtggg cgccaacggc ctgctgcacg tgtcgcccta ctacaacaag cccacgcagg
     1261 aagggcagta ccagcacttc aaggcgattg ccgagagcac ccgcctgccg atcctgctgt
     1321 acagcatcca gggtcgcacc ggcgtgaaca tcgacgcgtc caccgtgctc cgtctggcgc
     1381 agatcccgaa catcatcggc atcaaggaag cgtccggcag cctcgttcag atgaccgaca
     1441 tcgtcgccaa cacgcccgag aacttcctgc tcctgagcgg cgacgatccg atcaccgtcc
     1501 cggtgatggc catcggcggg cgcggcgtca tctcggtcgc gtcgaacgaa gtgccggcgg
     1561 aactggtgca ggtcgtcgag ctgtgcgaga agggcgacta cgccgcggcg cgcaagctcc
     1621 agggctggct gctgccgctt ctcaccggga acttcgtgga gagcaatccc gccccctgca
     1681 aggcggcgat ggcggcgatg gggctctgcg aggaggacgt gcgcctgccg ctcgtgccga
     1741 tcacgccggc ctcgcgcgag cgggtgatgg gcatcctgca gaagctgcgg cttctcggcg
     1801 cggccgcccg cgtctgatgt ccgatctcgc ggacgagatc acttccctct tcgagcaggg
     1861 cgcctcggcg tcgaagcagc aggcgcgcga cgccttcacg cggctgcggg gcgagctctc
     1921 cgccggccgc gtgcgctccg cggagcccga cccgtcgtct cccaccggct ggcgcgtcaa
     1981 cgcgtgggtg aagcagggca tcctcctcgg cctgcgctgg ggcgacgtcg tggacgtggg
     2041 catcggcaag gggcgctggc cgttcctcga caaggacacg ctgccgctca aaccgctcaa
     2101 cgtgtcgagt cgcgtgcgcg tcatccccgg cggctcgtcg attcgcgacg gcgcgtacct
     2161 cggcaccggc gtgatctgcg cgccgcccat gtacatcaac gtcggcgcct acgtggacga
     2221 cttctcgttc gtggactcgc acgcgctggt cgggtcgtgc gcgcagatcg gcaagaacgt
     2281 ccacctgagc gcggcggcgc agattggcgg cgtgctcgaa ccggtgggcg ccatgccggt
     2341 gatcgtcgag gacgacgcgc tcgtcggcgg caactgcggc gtctatgaag gcgtgatcgt
     2401 caagcgccgc gcggtgctcg ggtcgggcac catcgtcacc ggttcgacgc cgatctacga
     2461 tctgccgaac ggcgtcatca tcacgcccgc cgcggggcag ccgctggttg tccccgaggg
     2521 tgcggtggtg gtaccgggcg ccagggcggt gacggccggc aagggccccg aatgggggct
     2581 gtcgctgtcg acgccggtga tcgtcaaata tcgcgatgag aagaccgacg cgcgcacgga
     2641 gctcgagcag tggattcggt agacgtcgat ctggttgacg tcgtcgcgct cacgcgcgcg
     2701 ctgtccgaca tcgactccac gacggggcgc gagtcggaag ccgggcggct gctggccgcc
     2761 gtccttcgcg agcgcggcta cgacgtgcag ga
//
LOCUS       DASSYW010000786         3593 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_969122, whole genome shotgun sequence.
ACCESSION   DASSYW010000786 DASSYW010000000
VERSION     DASSYW010000786.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3593)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3593)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3593
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_969122"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(100..1056)
                     /locus_tag="VFN38_12555"
     CDS             complement(100..1056)
                     /locus_tag="VFN38_12555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012644.1"
                     /translation="MSFSCHSVVHRRRHRAALLLLLLPPLAACERRPAASRADSLVPA
                     DSATAASAAERRVASGWTVAAGPALLVQGPARDEAIALYPTADDSDAVAQLDSASMRQ
                     LPVTLVGRGGAVLTGLLGAPSGDGTDECERWPLRTLQPDSVATWAVGFVSARVSPVAL
                     DSVEVLSPRDSMALAAEASRLASAVALPTSASFQGLRFTAQDLRRFQAAPGVQGLVAH
                     MVRRVNQEANPLEEQTLLIAERDSGATSGPYQLAYAERDFGREEAVITPEVLAVVRLG
                     PGATATLVIARDNDAGISYRMIERAAARRWRARWSSGTISCS"
     gene            1108..2535
                     /locus_tag="VFN38_12560"
     CDS             1108..2535
                     /locus_tag="VFN38_12560"
                     /inference="COORDINATES: protein motif:HMM:NF023128.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HET9012645.1"
                     /translation="MDRPPAAAAPPVPATTTRAPLRERASWALYDFANTIFSMNVATL
                     YFSVWLIDDLGASNTVYALGNGLSSLLVVLSIPVLGALSDARRRRKPWVVGFTVASCI
                     ATAAIGVLGQRTLPIVGEGTIGAAVHGAWHPSFATFGWVLLAFVIANYCYQAAQPFYN
                     AMMPELVPPAEQGRLSGFGTAVGYVGTIVGLLLVVPFFNGAFPLVGDISPSLLDTLRA
                     AVPFTSHAGRVSTFVPTAILFLLFSLPLFVFCRDRHPRPGKVAWRQTFAAVAHTLRDA
                     RDHKGALPFILASFLYQDAIGTIVSFMALYAVKAMGFAKGAETTLFLVLTVPAIFGSY
                     IAGRLVDRFGAKRTLVISIVSWIVLLLAMIIVPTQQAFWVVGLFIGLIFGAVPTAERP
                     MLLSLVPEAEAGRFFSLMLLSSRAAAVAGPLIWGLTVDGLEPIHGTGLAYRAAVLTVA
                     LMFAASLFLMRKVPDRPARATTIPV"
     gene            2540..>3593
                     /locus_tag="VFN38_12565"
     CDS             2540..>3593
                     /locus_tag="VFN38_12565"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HET9012646.1"
                     /translation="MLYRALRGAADIALHWYYADVVVQGAERIPADGPLVIVSNHPNA
                     LVDALLVGTTLRRRVLITAKATLFEHPLLAPVLRGVGVVPLRRAKDARAAASRGSATA
                     ARNTESFRQVTDALVRGGAVLVFPEGISHDQPALAPLKTGAARMALAAADAGARGIRV
                     LPLGLIFERKEQPRSRVLVRAGDPIDVDAWRARTGSADAARLTAEIDAALRHVTLNFA
                     SESRANRAVALAGALAAIIEPPPTLDRPRPLATEAELARRIEVATDALESAPPAAAAQ
                     ADAFIARVEALEARLRVRGAALDEVRISARLRHGARFVLREGLIAIVALPLALLGRLV
                     HWLPLRLARVLAMRPFA"
BASE COUNT          436 a         1347 c         1253 g          557 t
ORIGIN      
        1 gtcatcccct acctgctcac cctggccgtc ctcgcgggtg cagtaggccg ggcccgcccg
       61 cggcgctggg caggcccatc tagcgggcgc cgggcgcggt cagctgcagc tgatcgttcc
      121 gctcgaccag cgagcgcgcc agcgtcgcgc ggccgcccgc tcgatcatgc gatacgagat
      181 gccggcatcg ttgtcgcgcg cgatgacgag cgtggccgtc gcgccggggc cgagccgcac
      241 gacggcgagg acctcggggg tgatcaccgc ctcctcgcgc ccgaaatcac gttccgcgta
      301 tgcgagctgg taggggccgg aggtggcgcc gctgtcgcgt tccgcgatga gaagcgtctg
      361 ctcctccagt ggattcgcct cctggttgac gcgtcgaacc atgtgcgcca ccagcccctg
      421 cacgcccggc gccgcctgga agcgccggag gtcctgcgcg gtgaagcgca gcccctgaaa
      481 cgacgcactg gtgggtagcg cgacggccga cgcgagccgt gacgcctcgg cggcgagtgc
      541 catgctgtcc cgcggcgaga gtacctccac ggaatcgagc gccaccggcg acacgcgcgc
      601 gctcacgaag ccaacggccc atgtcgccac ggaatcgggc tgcagcgtgc gcagcggcca
      661 gcgttcgcac tcgtccgtcc cgtcacccga cggcgcgccg aggaggcccg tgaggaccgc
      721 gccgccacgc cccaccaggg tcaccgggag ctgacgcatg ctcgccgagt cgagttgcgc
      781 gacggcatcg ctgtcgtctg cggtcggata cagggcgatg gcctcgtcgc gggccggccc
      841 ctgcacgagc agcgcggggc cggcggcgac ggtccatccg ctggccacgc gccgctccgc
      901 cgcggacgcc gccgtcgccg agtcggcggg cacgagggag tcggcgcgcg aggccgctgg
      961 ccgccgctca caggcggcca gcggcgggag gagcaggagc agcagggccg cccggtgacg
     1021 ccggcggtga acgaccgaat ggcagctgaa cgacatggcg gtaatttggg gcggtgcgag
     1081 gcgccgtcaa tcagccttcg aggatccatg gaccgaccgc cggcagcagc ggcaccgcca
     1141 gttcccgcca cgaccacccg tgctccgctg cgcgagcgcg cgagctgggc gttatacgac
     1201 ttcgcgaaca ccatcttctc gatgaacgtc gcgacgctct acttctcggt ctggctgatc
     1261 gacgacctcg gggcgtcgaa caccgtatac gcgctcggca acgggctgtc ctcgctcctc
     1321 gtcgtgctgt ccattccggt gctcggggcg ctctcggacg cccggcggcg gcgcaagccg
     1381 tgggtcgtgg ggttcaccgt ggcctcgtgc atcgcgaccg ccgccatcgg cgtgctcggc
     1441 cagcgcaccc tgcccatcgt gggcgaggga acgatcgggg ccgccgtcca cggcgcgtgg
     1501 catccatcgt tcgccacctt cggctgggtg ctgctggcct tcgtcatcgc caactactgc
     1561 taccaggccg cccagccgtt ctacaacgcg atgatgcccg agctcgtccc tcccgccgag
     1621 cagggtcgcc tctccggctt cggaacggcc gtgggctacg tcggcaccat cgtcggcctc
     1681 ctgctcgtcg tcccgttctt caacggcgcc ttccccctcg tcggcgacat ctccccgtcg
     1741 ctcctcgaca cgctgcgcgc cgccgtgccc ttcacgtccc acgcggggcg ggtctccacg
     1801 ttcgtgccga cggcgatcct gttcctcctc ttctcgctgc cgctgttcgt cttctgccgc
     1861 gaccggcatc cgcgaccggg caaggtcgcc tggcgccaga cattcgccgc cgtggcgcac
     1921 acccttcgcg acgcgcgcga ccacaagggt gcgcttccct tcatcctggc gtcgttcctc
     1981 tatcaggacg cgatcggcac catcgtctcc ttcatggctc tctacgccgt gaaggcgatg
     2041 ggcttcgcca agggagcgga gaccaccctg ttcctcgttc tcaccgtccc cgccatcttc
     2101 ggcagctaca tcgccggacg cctggtggac cgcttcggcg ccaagcgcac gctcgtcatc
     2161 tccatcgtgt cctggatcgt gctgctgctc gccatgatca tcgtgccgac acagcaggcg
     2221 ttctgggtgg tcgggctgtt catcgggctg atcttcggag cggtgccgac ggcggagcgt
     2281 cccatgctgc tgtcgctcgt gccggaggcg gaggcggggc gcttcttcag cctcatgctg
     2341 ctgtcgtcgc gtgcggccgc cgtggccggc ccgctgatct ggggactcac ggtggacggg
     2401 ctggagccca tccacggcac cgggctggcg tatcgcgccg cggtgctgac cgtcgcgttg
     2461 atgttcgccg cctcgctctt cctgatgcgc aaggtgcccg accggccggc tcgcgcgacg
     2521 acgataccgg tgtgagctga tgctctatcg ggccctgcgc ggcgcggccg acatcgcgct
     2581 gcactggtac tacgccgacg tcgtcgtgca gggagcggag cgcatccccg ccgacgggcc
     2641 gctcgtcatc gtctcgaacc accccaatgc gctcgtcgat gcgctgctgg tggggacgac
     2701 cctccgccgc cgcgtgctga tcaccgccaa ggccaccctg ttcgagcatc cgctgctcgc
     2761 ccccgtgctg cgcggggtgg gggtcgtgcc gttgcggcgc gccaaggacg cgcgcgccgc
     2821 ggcgtcccgc ggctcggcca cggcggcacg caacacggag agcttccgtc aggtgacgga
     2881 tgcgctggtg cgcggtgggg ccgtgctcgt ctttccggag ggcatcagcc acgaccagcc
     2941 ggcgctcgcg ccgctgaaga ccggggcggc gcggatggcg ctcgccgccg ccgacgccgg
     3001 cgcacgcggc atccgggtgc tgccgttggg gctgatcttc gagcgcaagg agcagccgcg
     3061 cagccgcgtc ctggtgcgcg cgggcgaccc gatcgacgtg gacgcctggc gcgcgcgcac
     3121 gggctcggcc gatgcggcac gcctcaccgc ggagatcgac gcggcgctgc gccacgtgac
     3181 cctcaacttc gccagcgagt cgcgggcgaa tcgcgccgtc gcgctcgccg gtgccctcgc
     3241 cgccatcatc gagccgccgc ccacgctgga ccgcccacgg ccgctcgcca ccgaggcgga
     3301 gctggcccgc cggatcgagg tggccaccga cgcactcgag agcgcacctc cggccgcggc
     3361 cgctcaggcg gacgctttca tcgcgcgcgt cgaggcgctg gaggcgcggc tccgcgtccg
     3421 cggcgcggcg ctggacgagg tgcggatctc ggcacgactg cggcacggtg cgcggttcgt
     3481 gctgcgcgag gggctcatcg ccatcgtggc gctcccgctc gcgctgctcg ggcgcctggt
     3541 gcactggctt ccgctgcgcc tcgcgcgcgt gctggccatg cgcccgttcg cgc
//
LOCUS       DASSYW010000787         4309 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1499617, whole genome shotgun sequence.
ACCESSION   DASSYW010000787 DASSYW010000000
VERSION     DASSYW010000787.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4309)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4309)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4309
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1499617"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1706)
                     /locus_tag="VFN38_12570"
     CDS             complement(<1..1706)
                     /locus_tag="VFN38_12570"
                     /EC_number="2.7.9.1"
                     /inference="COORDINATES: protein motif:HMM:NF004531.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate, phosphate dikinase"
                     /protein_id="HET9012647.1"
                     /translation="MRLHRRMNPWRLNLDCMPRSVYFFGNGSAEGTKDMKAVLGGKGA
                     NLAEMTNLGVPVPPGFTIACDVCIAYLGDGVVTDGLRAEVTANLERLEQAIGKRFGDP
                     ANPLLVSVRSGAPMSMPGMMETILNLGLNDLTVLGLARASGSPRFAYDSYRRFIQMYG
                     DVVLGVPHHTFEQLLSTKRLTAGVESDSELREDQLRNLVEEYKALVRATTGREFPMDP
                     VEQLWGAIEAVWKSWTLKKAQDYRRHAGIPDTLGTGVNVVSMVFGNLGDDSGTGVAFT
                     RNPSTGERRFYGEFLVNAQGEDVVAGIRTPLSIDEMAGRLPAAYDALLETQDRLERHY
                     CDMQDIEFTVERGKLFLLQTRTGKRTAAAAVRIATEMVAEGMISTREAVTRVPAEQLD
                     QLLHPVIDPSVRATPIATGLPASPGAANGLAVFDADEAVRRAANGEAVILIREETTPE
                     DFHGLVAARAVLTSRGGMTSHAAVVARGMGKCAVVGCKEMVVDHERRACSMNGTTINE
                     GDWLTLDGGTGKVFVGDLPTTPSEVVQVVRGTLARAVAPAFQSFDRLMGWADEVRTLR
                     VRA"
     gene            complement(1753..3132)
                     /gene="purF"
                     /locus_tag="VFN38_12575"
     CDS             complement(1753..3132)
                     /gene="purF"
                     /locus_tag="VFN38_12575"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004044 - amidophosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HET9012648.1"
                     /translation="MCGIFGLRGHADAVGLTKLGLYSLQHRGQESAGIVAVDERGDAR
                     GVRSMGLVSDMPNPQLDALHGTMAIGHTRYSTAGSSSIENAQPVLVSSRGGHISLAHN
                     GNLTNAGELRVELEELGSIFASTMDSEVIVHRLARSTATRPEDRLADALRGVEGAYSI
                     LIILGETLLAARDPRGWRPLVMGRLDGSPVFGSETCALDIVGAQYERDIEPGEIFAVD
                     AEGERSIFPFEKKELKRCVFEHVYFARPDSRIFGGSVDRARRALGRRLAQECPAPGAD
                     LVFSVPDSSNSAAIGFAEESGLPYELALIRNNYVGRTVIQPTQATRDAKVRLKYNAVR
                     EVLDGKRVVMVDDSIVRGTTTRGLVQLVRAAGAAEVHMRVSSAPVTGPCYYGIDTPSR
                     EELIAANHTLEEIRASLGVDSLGYLSLDGMLQSVPGGPHGFCHACFSGDYPTPPPTDP
                     DKLRFGCGC"
     gene            complement(3138..>4309)
                     /locus_tag="VFN38_12580"
     CDS             complement(3138..>4309)
                     /locus_tag="VFN38_12580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AIR synthase related protein"
                     /protein_id="HET9012649.1"
                     /translation="PTYEPEARESADVKSRRARDPHKIPERAEEADPLWTLERLLLSP
                     TIASKRWVYQQYDHTVRTSTVIGPGGDAAVVRVRGTDRAIALKTDCNGRYVFLDPRVG
                     AQIAVAEAARNVACSGGRPMAITNNLNFGNPRKPEVYFQLREAVAGLKVACEVLGTPV
                     TGGNVSLYNENPTGAVYPTPVIGMVGLVESLAHVTRSAFSTDGDAIVLLGENTDELGG
                     SEYLQRIHDEVIGAPPRVDLRAEKALIEALLEAIRAGTVRSAHDVSDGGLAVALAECL
                     MMDRARPVGAQVDLSPWAALPLRALLFGEAQGRVIVSTPDEAALRAVASRHGVKATAI
                     GTVRAGTGSLELRIGARQLRVSVAHLADAYHEAIPRIMQRTASAQDVALASDSVV"
BASE COUNT          596 a         1513 c         1571 g          629 t
ORIGIN      
        1 gcccggaccc gaagggtgcg cacctcgtcg gcccacccca tcagccgatc gaacgactgg
       61 aaggccggcg ccacggcgcg cgcgagcgtc ccgcgcacca cctgcaccac ctcgctgggc
      121 gtggtgggaa ggtcgccgac gaacaccttg ccggtgcccc cgtccagggt gagccagtcg
      181 ccctcgttga tggtcgtgcc gttcatcgag caggcgcgcc gctcgtggtc cacgaccatc
      241 tccttgcatc ccaccacggc gcacttgccc atcccgcgcg cgacgacggc ggcgtggctg
      301 gtcatccccc cgcgggaggt gagcacggcc cgcgcggcca cgaggccgtg gaagtcctcc
      361 ggggtcgtct cctcccggat gaggatgacc gcctcgccgt tggcggcgcg ccgcaccgcc
      421 tcgtccgcgt cgaacaccgc gagcccgttc gccgcgccgg ggctcgccgg gaggcccgtg
      481 gcgatgggcg tggcgcgaac gctgggatcg atgacggggt gcagcagctg gtcgagctgc
      541 tcggcgggga cgcgcgtcac cgcctcgcgg gtggagatca tcccttcggc caccatctcc
      601 gtggcgatgc gcacggcggc ggcggcggtg cgcttcccgg tgcgcgtctg cagcaggaac
      661 agcttgccgc gctccacggt gaactcgatg tcctgcatgt cgcagtagtg ccgctccagc
      721 cggtcctgcg tctcgagcag cgcgtcgtac gccgcgggca ggcggccggc catctcgtcg
      781 atgctgagcg gggtgcggat gccggcgacg acgtcctcgc cctgggcgtt gacgaggaac
      841 tcgccgtaga agcgccgctc gcccgtgctc gggttgcgcg tgaacgcgac gccggtgccg
      901 gagtcgtcgc ccaggttgcc gaacaccatg ctcacgacgt tcacgccggt gccgagcgtg
      961 tcggggatcc cggcgtgccg ccggtagtcc tgggccttct tcagggtcca cgacttccac
     1021 accgcctcga tggcgcccca gagctgctcc accgggtcca tcggaaactc gcgccccgtg
     1081 gtggcgcgca cgagcgcctt gtactcctcc accaggttcc ggagctggtc ctcgcgcagc
     1141 tccgaatcgc tctccacccc ggcggtgagg cgcttggtgg acagcagctg ctcgaaggtg
     1201 tgatggggca cgccgagcac gacgtcgccg tacatctgga tgaagcggcg atacgagtcg
     1261 taggcgaagc gcgggctgcc gctggcgcgc gcgagcccga gcacggtgag gtcgttgagg
     1321 ccgaggttga ggatggtctc catcatcccc ggcatcgaca tcggcgcgcc gctgcgcacc
     1381 gacaccagca gcgggttggc cgggtcgccg aaccgcttgc cgatcgcctg ctccagccgc
     1441 tcgaggttgg ccgtcacctc ggcgcgcagc ccgtcggtga cgacgccgtc gccgaggtac
     1501 gcgatgcaga cgtcgcaggc gatggtgaag ccgggcggca cggggacgcc gaggttggtc
     1561 atctcggcga ggttggctcc cttgccgccg agcacggcct tcatgtcctt ggtgccttca
     1621 gcgctgccgt tgccgaagaa gtagaccgat cgaggcatgc aatccaggtt gaggcgccac
     1681 gggttcatgc ggcggtgaag ccgcatcgga ggcagcggcg gcgcgagcga ccaccggccc
     1741 gaggcccggt ggtcagcagc cgcagccgaa gcggagcttg tccgggtcgg tcgggggcgg
     1801 ggtcggatag tcgccggaga agcacgcatg gcaaaagccg tgcgggccgc cggggacgga
     1861 ctgcagcatg ccatcgagcg acaggtaccc cagcgaatcc acgcccagcg aggcgcggat
     1921 ctcctcgagg gtgtggttgg cggcgatcag ctcctcacgg ctgggcgtgt cgatgccgta
     1981 gtagcacggc ccggtgaccg gcgcggagct gacgcgcatg tggacctcgg cggcgccggc
     2041 ggcgcgcacg agctgcacga gcccccgggt ggtggtaccg cggacgatgg aatcgtccac
     2101 catcaccacc cgcttgccgt cgagcacttc ccgcacagcg ttgtacttga gcctcacctt
     2161 cgcgtcgcgg gtcgcctggg tgggctggat gacggtgcgg ccgacgtagt tgttccggat
     2221 cagcgcgagc tcgtagggca ggccgctctc ctcggcgaag ccgatcgccg ccgagttgga
     2281 ggagtcgggg acgctgaaca cgaggtccgc gcccggcgcc ggacattcct gggcgagccg
     2341 ccggccgagc gcgcggcggg cgcggtccac cgacccgccg aagatccgcg agtcgggacg
     2401 ggcgaagtac acgtgctcga agacgcagcg cttgagctcc ttcttctcga agggaaagat
     2461 ggaccgctct ccctccgcgt ccacggcgaa gatctcgcca ggctcgatgt cgcgctcgta
     2521 ctgtgcgccg acgatgtcga gcgcgcaggt ctccgagccg aacaccgggg agccgtcgag
     2581 ccgccccatg acgagcgggc gccagccgcg cgggtcgcgc gccgcgagga gggtctcgcc
     2641 gaggatgatg aggatgctgt aggccccttc caccccgcgc agcgcgtcgg cgagccggtc
     2701 ctcgggccgc gtcgccgtgg accgggcgag ccggtgcacg atgacctccg agtccatggt
     2761 ggacgcgaag atggagccca gctcctcgag ctcgacgcgt agctcgccgg cgttggtgag
     2821 gttgccgttg tgcgcgagcg agatgtggcc gccgcgcgag ctcaccagca cgggctgcgc
     2881 attctcgatg gacgaggagc ccgcggtgct gtaccgcgtg tggccgattg ccatcgtgcc
     2941 gtgcagcgcg tcgagctgcg gattgggcat gtcggagacg aggcccatgc tccgcacgcc
     3001 gcgcgcgtcg ccgcgctcgt ccaccgccac gattcccgcc gattcctggc cgcgatgctg
     3061 cagcgagtac aaacccagct tggtgaggcc caccgcgtcg gcgtgcccgc ggagcccgaa
     3121 gatgccacac ataggcgcta gaccaccgag tcggaggcga gggcgacgtc ctgtgccgac
     3181 gccgtgcgct gcatgatgcg cgggatggcc tcgtggtagg cgtcggcgag gtgggcgacg
     3241 ctcacgcgga gctggcgcgc gccgatccgc agctccagcg agccggtgcc ggctcgcacg
     3301 gtgccgatcg ccgtcgcctt caccccgtgc cgcgacgcga cggcgcgcag cgccgcctcg
     3361 tccggcgtgg agacgatcac gcgtccctgc gcctcgccga acagcagggc gcgcagggga
     3421 agcgccgccc agggggacag gtcgacctgc gcccccaccg ggcgggcccg gtccatcatg
     3481 aggcactcgg cgagggcgac ggcgagcccg ccgtcggaga cgtcgtgcgc cgagcgcacc
     3541 gtcccggcgc ggatcgcctc caggagcgcc tcgatgagcg ccttctcggc gcgaaggtcg
     3601 acgcgcggag gggccccgat gacctcgtcg tggatgcgct ggaggtactc gctgcctccc
     3661 agctcgtcgg tgttctcacc gagcaggacg atcgcgtcgc cgtcggtgga gaacgcggag
     3721 cgggtgacgt gcgcgagcga ctccaccagc cccaccatcc cgatcaccgg cgtggggtac
     3781 accgccccgg tgggattctc gttgtacagc gagacgttgc cgccggtgac cggcgtgccc
     3841 aggacctcgc acgccacctt caatcccgcg accgcctcgc ggagctggaa gtagacctcc
     3901 ggcttgcggg gattgccgaa gttcaggttg ttcgtgatcg ccatcggccg cccgccggag
     3961 cacgcgacgt tgcgcgccgc ctcggcgacg gcgatctgcg cgccgaccct gggatccagg
     4021 aacacgtagc ggccgttgca gtcggtcttg agggcgatcg cgcggtcggt gccgcgcacg
     4081 cgcaccacgg ccgcgtcgcc gcccggcccg atcaccgtgc tcgttcgcac ggtgtggtcg
     4141 tactgctggt agacccagcg cttgctcgcg atggtgggcg agaggagcag ccgctcgagc
     4201 gtccagagcg gatcggcctc ctcggcgcgc tcgggaatct tgtgcgggtc gcgcgcgcgg
     4261 cggctcttca cgtcggcgct ctcgcgcgcc tccggctcgt aggtcggac
//
LOCUS       DASSYW010000788         2045 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1370588, whole genome shotgun sequence.
ACCESSION   DASSYW010000788 DASSYW010000000
VERSION     DASSYW010000788.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2045)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2045)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2045
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1370588"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1226
                     /locus_tag="VFN38_12585"
     CDS             <1..1226
                     /locus_tag="VFN38_12585"
                     /inference="COORDINATES: protein motif:HMM:NF045061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HET9012650.1"
                     /translation="LHREVRGPTPLVRIDAVNLGCATCHAGVTYGADGRATRDAWAGL
                     PNASINLEAYTQAVFIALSSAIRDQGAFRSRITDLFPETGRAERFTLRWLLLPRVARR
                     IAELREEGLGPVPFSNGGAGRTNGVASLKASLGIPAGVVTGHADVGFTSIPDLANRGL
                     RTSLLYDGIYAPSGTARHDVQTTAANVTPDVGERAIPAMRPVLQWLGRAYAPPPFPGV
                     IDSARMRAGAVVYASRCASCHGSYGDGAPRPLTSFPNALIEQGVMNTDSARWMVVDSA
                     LLHGLATSAYARHMRSERTGGYVAPILSGVWATAPYLHNGSVPTMWQLLTPKDRPTRF
                     LVGGHALDFRELGIAGVRWTDDTWRYPAGYVPWSIPELYDTRAPGLSNRGHERPSRGL
                     SDAEKWALIEYLKTL"
     gene            1300..>2045
                     /locus_tag="VFN38_12590"
     CDS             1300..>2045
                     /locus_tag="VFN38_12590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HET9012651.1"
                     /translation="MLELLTDPQAWVALATLLALEIVLGVDNVVFISILAGKLPANQQ
                     RRARTVGLALALVTRILLLLSLSWIIKLTAPLFAILGHEISGRDLILIVGGLFLLGKS
                     THEMHQRLEGAEGAASARVGPSFAAVIVQILLLDIVFSLDSVITAVGMVDELAIMITA
                     VILALVVMLAFAGRISAFVENHPTVKMLALAFLLLIGTTLIAEGFGQHISKGYIYFAM
                     AFSLFVEVLNLKARARAADRVRLHHPYAAQP"
BASE COUNT          292 a          737 c          679 g          337 t
ORIGIN      
        1 tgctccaccg cgaggtgcgc ggccccacgc cgctcgtacg catcgacgcc gtgaacctcg
       61 gctgcgccac ctgccacgcc ggtgtgacgt acggcgccga tggccgtgcg acgcgcgacg
      121 catgggccgg cctgcccaac gcgtcgatca atctcgaggc gtacacgcag gcggtgttca
      181 tcgcgctgtc gtcggcgatc cgcgatcagg gtgcgttccg gtcgcgcatc accgacctct
      241 ttcccgagac ggggcgcgcc gaacggttca ccctgcgctg gctgctgctg ccgcgcgtgg
      301 cgcgacgcat cgccgagctg cgcgaggagg gcctcggtcc cgtgcccttc tcgaacggcg
      361 gcgcggggcg caccaacggc gtcgcgtcgc tcaaggcgag tctcggcatt ccggcgggtg
      421 tcgtcaccgg ccacgcggac gtggggttca cctcgatccc cgacctcgcg aaccgcggac
      481 tgcgtacgtc gctgctgtac gacggcatct atgcgccgag cgggacggcg cggcacgacg
      541 tccagaccac ggcggcgaac gtgacgccgg acgtgggcga gcgcgcgatc cccgcgatgc
      601 gaccggtgct gcagtggctc ggcagggcat acgcgccgcc accctttccc ggcgtgatcg
      661 actccgcgcg catgcgcgcc ggcgccgtgg tgtacgcgtc ccgctgcgcg agctgtcacg
      721 gcagctacgg cgatggcgcg ccgaggcccc tgacgtcgtt ccccaacgcg ctcatcgagc
      781 agggcgtgat gaacaccgac tccgcgcgct ggatggtggt ggacagcgcg ctgcttcacg
      841 gcctcgcgac gagcgcgtat gcgcggcaca tgcgctccga acgcacgggt ggctacgtcg
      901 cgccgatcct ctcgggggtg tgggccacgg caccctacct gcacaacggc agcgtgccca
      961 ccatgtggca gctgctcacg ccgaaggacc ggccgacgcg ctttctcgtg ggcggccacg
     1021 ccctcgactt ccgcgagctg ggcatcgccg gcgtgcgatg gacggacgac acctggcggt
     1081 atccggcggg ctacgtcccc tggtccatcc cggagctgta cgacacgcgc gcgccggggc
     1141 tgtccaatcg tgggcacgag cgcccatcgc gcggcctctc cgacgcggag aagtgggcgc
     1201 tcatcgaata cctgaagacg ctgtaagacg ttcgacgtct gacgttcgac gtcccacgtc
     1261 ccacgatcac acatccaact ccacccgcgg acatcgacca tgctcgagct gctgaccgac
     1321 cctcaggcgt gggtcgccct cgccaccctg ctcgcgctcg agatcgtgct cggcgtggac
     1381 aacgtggtgt tcatctccat cctggccggc aagcttcccg cgaaccagca gcggcgggca
     1441 cgcaccgtcg gactcgcgct cgcgctcgtg acgcgcatcc tgctgctgct ctcgctctcc
     1501 tggatcatca agctgaccgc gccgctgttc gcgatcctgg gacacgagat ctccgggcga
     1561 gacctgatcc tcatcgtcgg cgggctcttt ctcctgggga agagcacgca cgagatgcat
     1621 cagcgactgg aaggggcgga gggggcggcg tccgcgcgcg tcggcccctc gttcgccgcg
     1681 gtgatcgtgc agatcctcct gctcgacatc gtcttctcgc tggattccgt gatcaccgcc
     1741 gtggggatgg tggacgagct ggcgatcatg atcaccgccg tcatcctggc gctcgtcgtg
     1801 atgctcgcct tcgccggccg gatcagcgcg ttcgtcgaga accatccgac ggtgaagatg
     1861 ctcgcgctcg cgttcctgct cctcatcggc acgacgctca tcgccgaagg gttcggtcag
     1921 cacatctcga aggggtacat ctacttcgcg atggcgttct cgctgttcgt cgaggtgctg
     1981 aacctcaagg cacgggcgcg cgcagccgat cgcgtgaggc tacatcatcc gtacgccgcc
     2041 cagcc
//
LOCUS       DASSYW010000789         2203 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1605933, whole genome shotgun sequence.
ACCESSION   DASSYW010000789 DASSYW010000000
VERSION     DASSYW010000789.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2203)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2203)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2203
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1605933"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1029)
                     /gene="hflX"
                     /locus_tag="VFN38_12595"
     CDS             complement(<1..1029)
                     /gene="hflX"
                     /locus_tag="VFN38_12595"
                     /inference="COORDINATES: protein motif:HMM:TIGR03156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HET9012652.1"
                     /translation="MDAVQNGSNRRAAQRALTIGVGPGETDLSELRELLRTAGVAVTG
                     EMVQRREKADPDRYFGRGKLTELKQAAKEADANLIAVDDELLPRQERNLEEELGMPVI
                     DRTAIILDIFADHARSAEGKLQVELAQLEYNLARMRGLWTHLERLGAGRMDGGIGTRG
                     PGESQIETDRRLARNRIAALRRRLRETKATRATMRRERERAALPTVALAGYTNAGKST
                     LLNTMTGSEVGVRERLFHTLDPTTRSFEISGRQYLLTDTVGFIRKLPHQLVEAFSATL
                     EEALGADLIVHVVDASVPEEEMHEMMAAVDDVLDEIGAGDTPRLLALNKVDLLSEERR
                     RVLSFRFSD"
     gene            1061..2023
                     /locus_tag="VFN38_12600"
     CDS             1061..2023
                     /locus_tag="VFN38_12600"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HET9012653.1"
                     /translation="MRAFVTGGTGFIGSRVVKRLRDRGDDVVVLARRPEKASALDAEI
                     VQGDLSDADAIRRGVEGCQAVFHIAADYRVGMDPSKQDSMRDSNIRGTERVLDAAADA
                     GVDKIVYVSTINIFGNTNGQTVDESYRRNEADGFVSTYDETKYRAHLVAEQRAAQGAP
                     IVIVQPGSVYGPGDHALVGQMIEQASTGKMPAKAFPELGLNMVHVDDVADGIMLAYDK
                     GKVGESYVLGGEITTQGDLIDRAAAIGGKKPPRMTVPPVVLKALSPVSRWVGPMMDLP
                     PNFKEMISAAHNVTYWAKDDKARSELGYSPRDLDTGLRETIQAG"
     gene            complement(1998..>2203)
                     /locus_tag="VFN38_12605"
     CDS             complement(1998..>2203)
                     /locus_tag="VFN38_12605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012654.1"
                     /translation="DEGGDLWHRRIEELDALACALCAHRYAVGHASFVDGVVLPGTSL
                     PHEFSTRGVMPPVERLNLPESSP"
BASE COUNT          345 a          748 c          791 g          319 t
ORIGIN      
        1 gtcggagaag cggaacgaga gcacgcggcg tctctcctcg gagagcagat ccaccttgtt
       61 gagcgccagc agccgcggcg tgtccccagc gccgatctcg tcaagcacgt cgtcgaccgc
      121 ggccatcatc tcgtgcatct cctcctcggg aaccgaggcg tccaccacgt gcacgatcag
      181 gtcggcgccg agcgcctcct ccagcgtcgc ggagaaggcc tccaccagct ggtgcggcag
      241 cttgcggatg aagccgacgg tgtccgtgag caggtactgg cggcctgaga tctcgaagga
      301 gcgggtggtc gggtcaagcg tgtggaagag ccgctctcta acccccacct ccgagccggt
      361 catggtgttg aggagcgtgg acttgccggc gttcgtgtag ccggccagcg cgacggtggg
      421 cagcgccgca cgctcgcgct cgcggcgcat cgtcgcgcgc gtggccttcg tctcccgaag
      481 gcggcggcgg agcgcggcga tccggttgcg ggccagccgg cgatcggtct cgatctgcga
      541 ctcgcccgga cccctcgtgc cgatgccgcc gtccatacgg cccgcgccga ggcgctccag
      601 gtgcgtccac agcccgcgca tgcgcgcgag gttgtactcg agctgcgcga gctcgacctg
      661 gagcttgccc tcggccgagc gagcgtggtc ggcgaagatg tcgaggatga tcgcggtgcg
      721 gtcgatgacc ggcatcccga gctcctcctc caggttgcgc tcctggcggg gcagcagctc
      781 gtcgtccacg gcgatcaggt tggcgtccgc ctccttcgcc gcctgcttca gctcggtgag
      841 cttcccgcgg ccgaagtagc ggtctggatc ggccttctcg cggcgctgga ccatctcgcc
      901 cgtgacggcc acgccggcgg tgcgaaggag ctcgcgaagc tccgagagat cggtttcgcc
      961 cgggccgacg ccgatcgtga gcgcccgctg cgcggcgcgc cgattcgacc cgttctggac
     1021 tgcatccacc gcttcaagtc tagggatagg ctcccgcgcc atgagagctt tcgtgactgg
     1081 cgggacgggg ttcatcgggt cccgcgtggt gaagcgcctg cgggaccgcg gcgacgacgt
     1141 cgtcgtgctc gcgcggcgcc cggagaaggc atccgcgctg gacgccgaga tcgtgcaggg
     1201 cgacctgtcg gacgccgacg cgatccgccg cggcgtcgag ggctgccagg ccgtgttcca
     1261 catcgcggcc gactaccgcg tgggcatgga cccctcaaag caggactcga tgcgcgactc
     1321 gaacatccgc ggcacggaac gggtgctcga cgcggcggcc gatgccggcg tggacaagat
     1381 cgtctacgtc tcgacgatca acatcttcgg gaacacgaac gggcagaccg tggacgagtc
     1441 gtacaggcgg aacgaggcgg acggcttcgt gtccacctac gacgagacga agtaccgcgc
     1501 gcacctggtc gccgagcagc gcgccgctca gggcgcgccg atcgtgatcg tgcagcccgg
     1561 ctctgtgtac gggccgggcg accacgcgct ggtgggccag atgatcgagc aggcgagcac
     1621 cggcaagatg cccgccaagg cgttcccgga gctcgggctc aacatggtgc acgtggacga
     1681 cgtggccgac gggatcatgc tcgcctacga caagggcaag gtcggcgagt cgtacgtgct
     1741 gggcggcgag atcaccacgc agggcgatct gatcgacagg gccgccgcga tcggcgggaa
     1801 gaagccgccg cgcatgacgg tcccgccggt ggtgctgaag gcgctgagcc cggtaagccg
     1861 ctgggtcggt cccatgatgg acctgccgcc gaacttcaag gagatgatct cggccgccca
     1921 caacgtcacg tactgggcga aggacgacaa ggcccgcagc gagctgggct acagcccgcg
     1981 cgacctcgac acgggcctca gggagacgat tcaggcaggt tgaggcgctc gaccggcggc
     2041 atcacgccgc gggtcgagaa ctcgtgcggc aggctggtgc cgggcagcac gacgccgtcc
     2101 acgaacgagg cgtgccccac ggcgtagcgg tgggcgcaca acgcgcacgc cagcgcgtcc
     2161 agctcctcga tccggcggtg ccacaggtcg ccgccctcgt cga
//
LOCUS       DASSYW010000790         3973 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_615015, whole genome shotgun sequence.
ACCESSION   DASSYW010000790 DASSYW010000000
VERSION     DASSYW010000790.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3973)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3973)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3973
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_615015"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2258
                     /locus_tag="VFN38_12610"
     CDS             <1..2258
                     /locus_tag="VFN38_12610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012655.1"
                     /translation="EINPVILPDGTSDGIATFAAARSTYAIVISAPPGSGGDFVLRPT
                     LIDLAPEHAARTIALGEVVSGERIDHRFDQDEFLVDVPVAQEVELYLSSDVGDYFPAS
                     VVRLGSAASAFDGSLRPPIGWAELELGASGRIALEAGRYAVRFSGNAGAAYRFQLRTV
                     SPRPEAAAELLTVGDTVAESIDYVGDYDDFLLRGTPGAEYEVFVSAGGSAPHQAQVLL
                     LGLSQAAGPYASAEPGGFLLDSATGRFAMPANGEVTVRVRDWWDKSGGLYRGPYRLVA
                     VAIDRRPEGRADTIAPSGGVIASALELYGDVDEYRFTLDAPTRVALRCAPTSGGGCGV
                     YSAAVYRDDAPGPPVSLDDLAPLAAGSYRLRVESGHGLRSSPLYRGPYQVVLARVDTI
                     PEDVAPSLTIGATVSESASWPWDIDTFTLDVTAADTLIVRLDSVGLAGSYFRTAVTDL
                     LTGRKLGVDGTYGAANRRIDPVPGRYAVAVSAFTSDWQPDAARTYRLAVERASAAPEG
                     RPVAVAVGDTLRSNFDYEGDVDDYVLTGAPWEMVSFTLIPEHASTHAGLEVVAVRATE
                     PTSGATLGITSSFGYYALTGVPVEIPSGGAVKLRVCNFSSCSVEHYIGPYTIAVNHVN
                     GPPESRPSAFAVGDTVMEALESGADVDEFTFGGTAGQAVDVIGLQAPTTPDGTTGAIL
                     EVFDQSGNARIAGLSIRDGDVRTMSAALRGLVLPTTGRYLVRIRSEPTATFQYPAGAY
                     RFVISGSAAPP"
     gene            complement(2233..3453)
                     /locus_tag="VFN38_12615"
     CDS             complement(2233..3453)
                     /locus_tag="VFN38_12615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HET9012656.1"
                     /translation="MPFVFRALMTGALCAAVATTASAQAVPPAAATDSVDPVRELVAR
                     LDLEKYKATIKGLTRFGDRRQGTARNRAAVDWIEAQLKSYGCTPTERITYDYQPPAPR
                     PAAAPTSPAPRPASDVAQGGGRLRGIRTRTGVNTDSLRQPDLALRKLNSEPTSPGQRQ
                     EVYCTKVGTTHPEEMYIVGGHMDGHGWGEAANDDGSGTAIVMELARIYSMPDVKTDRS
                     IRFVLWNNEETGLNGARAYVAQRQALQGRESPAGSGKYPEPKWLGMIQHDMMLFDHGM
                     PRADGTMSPEQRPEADVNVEFQSNSKMAAESQKLAWMFATANEKYATDYPAAVGQHMT
                     NTDSAPFQDLVPSISLRENERGAQIGAGWDPQWHQPTDVFSTYTDKDFRLGLNAAQTT
                     LGAIALLTGARLNR"
     gene            complement(3517..>3973)
                     /locus_tag="VFN38_12620"
     CDS             complement(3517..>3973)
                     /locus_tag="VFN38_12620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HET9012657.1"
                     /translation="GHSGGGFAAADAMFRYPEFFDVGIAESGNHDNRNYEDDWGERYQ
                     GLLVRNGNTDNYAEEANQSHAARLRGKLLLVHGEMDDNVPPYNTQLVADALVKAGKDF
                     DLLMLPHQRHGYGVDAAYVMRRRWDYFVRNLMGAEPPKEYQIGRPSIVP"
BASE COUNT          545 a         1388 c         1383 g          657 t
ORIGIN      
        1 gcgagatcaa ccccgtgatc ctgcccgacg gcaccagcga cggcatcgcc accttcgcgg
       61 cggcgcgctc cacctacgcg atcgtgatct cggcgccacc gggcagcggc ggcgacttcg
      121 tgctccggcc gacgctcatc gacctggcac cggagcacgc ggcgcgaacg attgccctgg
      181 gcgaggtcgt gtccggcgag cgcatcgacc atcgcttcga ccaggacgag ttcctcgtcg
      241 acgtccccgt ggcgcaggag gtcgagctct atctgagctc cgacgtcggc gattacttcc
      301 ctgcctccgt cgtgcgcctg ggcagcgccg cgagcgcgtt cgacggatcg ctccgcccgc
      361 ccatcgggtg ggcagagctc gagctgggcg cgtcgggccg catcgcgctc gaggcgggac
      421 gctacgccgt gcgcttcagc ggcaacgccg gcgccgcgta ccgctttcag ctccgcacgg
      481 tgagcccccg cccggaagcg gccgccgagc tgctcacggt cggcgatacg gtcgccgagt
      541 cgatcgacta cgtcggcgac tacgacgact tcctgctgcg cggcacgccc ggcgccgagt
      601 acgaggtgtt cgtgagcgcg ggaggcagcg ccccgcacca ggcgcaggtg ttgttgctgg
      661 gactgtcgca ggccgcgggg ccgtacgcca gcgccgagcc cggcggcttt cttctcgatt
      721 cggcgaccgg gcgcttcgcg atgccggcga acggagaggt gacggtgcgc gtcagggact
      781 ggtgggacaa gagtggcggc ttgtaccgcg gaccctatcg cctcgtggcg gtcgccatcg
      841 accgccgccc cgagggacga gccgacacga tcgcgccgag cggcggcgtg atcgcgagcg
      901 cgctggagct gtacggcgac gtcgacgaat accgcttcac cctcgatgca ccgacacgag
      961 tcgcgctgcg ctgcgcgccg acatccggcg gcggctgcgg cgtctactcg gcggccgtct
     1021 accgggacga cgcaccggga ccgcccgtga gcctcgacga tctggcgccg ctggccgcgg
     1081 ggtcgtaccg cctgcgagtg gagtcagggc atggcctgcg gtcgtcgccg ctgtaccgag
     1141 gcccgtacca ggtcgtgctc gccagggtgg acaccatccc cgaggacgtg gcgccttcat
     1201 tgacgatcgg cgcgaccgtg tccgaatcgg cgagctggcc atgggacatc gacacgttca
     1261 cgctcgacgt gacggcggcg gacacgctga tcgtgcgcct cgattccgtc ggcctggcgg
     1321 gctcctactt ccgcaccgcg gtgacggacc tgctcaccgg gcgcaagctc ggcgtcgacg
     1381 gaacctatgg cgcagcgaat cgccggatcg atcccgtgcc tggacgctac gccgtcgccg
     1441 tcagcgcgtt cacctccgat tggcagcccg atgcggcgcg cacctatcga ctggccgtcg
     1501 agcgcgcgag cgccgcgccc gaaggccgtc cggtggcggt ggccgttggc gacacgctgc
     1561 gcagcaactt cgattacgag ggcgacgtcg acgactatgt gctcacgggc gcgccctggg
     1621 agatggtgag cttcacgctc atccccgagc acgcgagtac ccatgcgggc ctggaagtcg
     1681 tcgccgtgcg ggctaccgag ccgacatcgg gcgcgacact ggggatcacg tcgagcttcg
     1741 gctattacgc cctcaccggc gtgcccgtcg agattccgtc cggcggcgcg gtgaagctgc
     1801 gcgtctgcaa cttttccagc tgctcggtcg agcactacat cggcccgtat acgatcgcgg
     1861 tgaatcacgt gaacggtccg ccggagtcgc ggccgtccgc gttcgccgtg ggcgatacgg
     1921 tgatggaggc gctcgagagc ggcgcggacg tcgacgagtt caccttcggc ggcaccgccg
     1981 gacaggcggt ggacgttatc ggcctccagg cgccgacgac gcccgacggc accaccggcg
     2041 cgattctcga ggtgttcgac cagtcgggca acgcccggat cgccgggctg tccatccgcg
     2101 acggcgacgt gcggacgatg agcgcggcgc tccgtggcct cgtgctgccc accacgggac
     2161 gctacctcgt gcgcatccga tcggagccga cggccacgtt ccagtatccg gccggcgcgt
     2221 atcggttcgt gatcagcggt tcagccgcgc ccccgtgagc aacgcgatgg cgccgagcgt
     2281 ggtctgcgcc gcgttgagtc cgagccggaa gtccttgtcg gtgtaggtcg agaacacgtc
     2341 cgtcggctgg tgccactgcg gatcccaccc cgccccgatc tgcgcgccgc gctcgttctc
     2401 gcgcaggctg atcgacggca ccaggtcctg aaagggcgcc gaatcggtgt tggtcatgtg
     2461 ctggccgacg gcggcgggat agtcggtggc gtacttctcg ttcgcggtgg cgaacatcca
     2521 cgcgagcttc tgcgattcgg ccgccatctt ggagtttgac tggaactcca cgttcacgtc
     2581 cgcctccgga cgctgctcgg ggctcatcgt gccgtcggcg cgcggcatcc cgtgatcgaa
     2641 cagcatcatg tcgtgctgga tcatgccgag ccacttcggc tcgggatact ttcccgagcc
     2701 ggccggactc tcccgcccct ggagcgcctg ccgctgtgcg acgtacgcgc gcgcgccgtt
     2761 gagtcccgtc tcctcgttgt tccagaggac gaagcggatc gagcggtcgg tcttcacgtc
     2821 gggcatgctg tagatgcgcg ccagctccat gacgatcgcc gtgccggagc cgtcgtcgtt
     2881 ggccgcctcg ccccatccgt ggccgtccat gtgcccgccc acgatgtaca tctcctccgg
     2941 atgcgtcgtg ccgaccttcg tgcagtagac ctcctgccgc tgtccgggtg acgtgggctc
     3001 gctgttcagc ttccggagcg cgagatcggg ctgccgcagc gagtcggtgt tcacgccggt
     3061 gcgcgtgcgg atgccgcgca gccgacctcc cccctgcgcc acgtcgctgg cgggacgcgg
     3121 tgctggcgac gtgggcgcgg ccgccggccg cggcgcgggc ggttgatagt cgtaggtgat
     3181 gcgctcggtg ggcgtgcacc cgtagctctt gagctgcgcc tcgatccagt cgacggcggc
     3241 gcgattgcgc gccgtgccct gacgccgatc gccgaatcgc gtcagcccct tgatcgtcgc
     3301 cttgtacttc tcgagatcga gtcgcgcgac gagctcacgg acaggatcga ccgaatcggt
     3361 cgccgccgcg gggggaacgg cctgcgccga ggccgtggtg gcgacggcgg cgcagagcgc
     3421 gccggtcatg agggcacgga acacgaaggg catcggagcg gtggtgggaa tgggtgaaat
     3481 ccttctcctg cggcgaaacc tgcgacgatc ccgcgactac ggtacgatcg acggccggcc
     3541 gatctggtat tccttcggcg gctcggcgcc catgaggttg cgcacgaagt aatcccagcg
     3601 acgccgcatc acgtacgcgg catcgacgcc gtagccgtgc cgctggtgcg gcagcatcag
     3661 caggtcgaag tccttccctg ccttcacgag cgcgtccgcc acgagctggg tgttgtacgg
     3721 cggcacgttg tcgtccatct cgccgtgcac cagcagcagc ttgccacgca gccgcgcggc
     3781 gtgcgactgg ttcgcctcct cggcgtagtt gtcggtgttc ccgttgcgca ccagcagccc
     3841 ctgatagcgc tcgccccagt cgtcctcgta gttgcggttg tcgtgattgc ccgattccgc
     3901 gatcccgacg tcgaagaact cgggataccg gaacatcgcg tcggccgcgg cgaatccgcc
     3961 gccggagtgc ccc
//
LOCUS       DASSYW010000791         5655 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1738766, whole genome shotgun sequence.
ACCESSION   DASSYW010000791 DASSYW010000000
VERSION     DASSYW010000791.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 5655)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5655)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5655
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1738766"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1604
                     /locus_tag="VFN38_12625"
     CDS             <1..1604
                     /locus_tag="VFN38_12625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA polymerase domain-containing protein"
                     /protein_id="HET9012658.1"
                     /translation="QRAARRGAPSSDPDDRRRVRFVAPGRELIDTMDAVRRHDMSVRD
                     LPGHGLKIVARHLGIAAPDREYIRGDLIFTTWRSDPERVRRYATDDVEEVAALSRMLG
                     GAAYALAQMAPRRYERLADAGAATGIIDPVLVRAYLRAGAALPAHEASDGTPHSGAAL
                     HQFATGVAHRVVKADVASLYPSLMRAYRIGPARDRLGALLALVDGLVERRLDAKARAR
                     AAAPGSAERHSHEAMSAGLKIVVNSAYGYMAAGGDLTRFADVHAANEVTRRGRELLGL
                     LCRELEARGVTLLEADTDGVYFAVPDEWSEADEARVVADVAALLPPLVQLEMEGRYAA
                     MLSHEPKNYALLGYDGTLLLRGVAFRSSRSEPFGDRFLRHALTRLLVGDVVGVRDVYL
                     HTIAALRSRRLPTHDVSSRVRLTKSPEQYLEAREKRRELPYEALLANGRETWSVGDRI
                     RVYRRRNGEGGLVAPNDDVAPLPDPHDYDVEYYVRLLRDTYAERLARAFSAEDFSVVF
                     ADPDQLSLFAPSVEAIRPILCAGPR"
     gene            1586..2821
                     /locus_tag="VFN38_12630"
     CDS             1586..2821
                     /locus_tag="VFN38_12630"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:proton antiporter"
                     /protein_id="HET9012659.1"
                     /translation="MRGTAMSTSSTLVLLYCISTAVAIAVRRLRVPFTVALVIVGLVL
                     GSLHLVAPPHLTRELLFTFFLPGLLFEAAFHLDLPAFRAWWRSALGLAVPGVLVAMGL
                     TAVMVAAAGRALGLSPALDLTLGFVFGALVAATDPVAVTAIFRETRAPARLGALVEAE
                     SLFNDGTGVVFLSLVLAYALGTVTSPVVIALEFALVAGGGVLVGLVVGWVISMVIRRV
                     DEPAIEIGLTVIAAYGSFVLAEQLGASGVLATVVAGMMCGRHGRDLGMSDASRAAVAT
                     FWEYVAFALNSIVFLLLGFSFDAARLGAIWPLIIVAFVAMTVARAAIVFATLGVQRVR
                     SEGMPWSWGTVITLGGLRGALSVVLALALPAELPQRELVVSLTIGVVLLSIVVQGLTV
                     PLVIRRLALESDTPRDRAP"
     gene            complement(2818..3411)
                     /locus_tag="VFN38_12635"
     CDS             complement(2818..3411)
                     /locus_tag="VFN38_12635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012660.1"
                     /translation="MSSSTPSTAAIARGVNFVLAREYVINTHGEAVWARALARVSPEE
                     RRVWEQPLLTVSSYDFGAFKAVTAAVAREINASGDRAVAAMYAYIAERSLNSFYKVFF
                     RLANPSFVIGNFPKLWSRFFTAGEVQVPVAQRERAELRFTVPDIFLDWLGPACLGYST
                     KALELAGGHDVTVREVERRALGAGLWQVAYDVVWREG"
     gene            complement(3489..3986)
                     /locus_tag="VFN38_12640"
     CDS             complement(3489..3986)
                     /locus_tag="VFN38_12640"
                     /inference="COORDINATES: protein motif:HMM:NF018595.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(4Fe-4S)-binding protein"
                     /protein_id="HET9012661.1"
                     /translation="MTDPSRTAEAPPHPAEPNQAPPVTREYSTDRITVEWHAERCIHS
                     ANCVRSLPQVFDPKRRPWVDVHAADADAIAQAVLRCPTGALHFVRHDGGAQEAPDVPT
                     SLTPIRNGPLYVRGDLELRALDGHLIRTGTRAALCRCGLARQVPFCDNTCRNERWRER
                     ANPDA"
     gene            complement(3988..4212)
                     /locus_tag="VFN38_12645"
     CDS             complement(3988..4212)
                     /locus_tag="VFN38_12645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012662.1"
                     /translation="MPQGDKDKYTDKQKRMEQHIEEGYESKGVGKDEAERRAWATVNK
                     QTGGGNKPGGSGRGKPDSSSGSAHRRGSSS"
     gene            complement(4407..>5655)
                     /locus_tag="VFN38_12650"
     CDS             complement(4407..>5655)
                     /locus_tag="VFN38_12650"
                     /inference="COORDINATES: protein motif:HMM:NF013592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="M1 family aminopeptidase"
                     /protein_id="HET9012663.1"
                     /translation="DYDVTLNVPANYVVWGTGTLRNAPAVLQPASLARFQQSLTSDST
                     IHVATLDDVRAKRVTAAGPVNAWHFSARHIPDVAFNLSDHYVWDAGSVQVDDATRRRA
                     SVQAAYNDTAADYRHMVQYGRHALDWLSHNWPGVPYPYEKTTVVQGPAGMEYPMMAND
                     ESYPDTVFSRFVAEHEIAHTYMPFYMGINESRYAFMDEGWATTFEYLIGTADLGAARA
                     TQAFQEFRVGRWINDPSPVQDLPIITPADALHGNAYGNNAYGKPALGYLALKDMLGDS
                     LFRTALHGYMDRWKGKHPIPWDFFNSVNDLTGRNLNWFWNAWYFSNGYIDVAIGDVRK
                     EARRYAVTLENVGGMPVPLDLVATWADGSTETFHQTSAIWRTNGRRAVVSLPARKALR
                     SVTFGGGIWMDADTTNDHWPRTK"
BASE COUNT          722 a         1990 c         2003 g          940 t
ORIGIN      
        1 ggcagcgcgc cgcgcgccga ggcgcgccgt cgtccgaccc ggacgaccgg cggcgcgtgc
       61 ggttcgtggc gccgggacgg gagctgatcg acacgatgga cgccgtgcgc cgccacgaca
      121 tgtcggtccg cgacctgccc gggcacgggc tcaagatcgt cgcgcgccat ctcggcatcg
      181 ccgcaccgga ccgcgagtac atccgcggcg acctgatctt cacgacctgg cgctccgatc
      241 ccgaacgggt gcgccgctac gcgacggacg acgtggagga agtcgcggcg ctctcgcgca
      301 tgctcggcgg cgccgcgtac gcgctcgcgc agatggcgcc gcggcgctac gagcggctgg
      361 ccgacgccgg cgccgccacg ggcatcatcg atcccgtgct cgtgcgcgcc tacctgcgcg
      421 cgggcgcggc gctccccgcg cacgaggcga gcgacggcac gccgcacagc ggcgcggcgc
      481 ttcaccagtt cgccaccggc gtcgcgcacc gggtggtgaa ggccgacgtc gccagcctgt
      541 acccgtcgct catgcgcgcg tatcgcatcg ggccggcacg ggaccggctg ggggcgctgc
      601 tcgcgctggt cgatggcctc gtcgagcgcc ggctcgacgc caaggcgagg gcgcgcgcgg
      661 cggcgcccgg ctcggcggag cgccactcgc acgaggcgat gtccgccggg ctgaagatcg
      721 tcgtgaactc ggcgtacgga tacatggcgg ccggcgggga cctcacgcgc ttcgccgacg
      781 tgcacgccgc caacgaggtg acccgtcgcg ggcgggagct gctcggtctc ctttgccgcg
      841 agctcgaggc gcgcggggtc accctgctcg aggcggacac ggacggcgtc tacttcgccg
      901 tccccgacga atggagcgag gcggacgagg cgcgcgtcgt cgctgacgtg gcggcgctgc
      961 tgccgccgct ggtgcagctc gagatggagg ggcgctacgc ggcgatgctc tcgcacgagc
     1021 ccaagaacta cgccctgctc ggctacgacg ggacgctgct gctgcgcggc gtcgcgttca
     1081 ggtcgagccg gtcggagccg ttcggcgacc gcttcctgcg ccacgcgctc acgcgcctgc
     1141 tcgtgggcga cgtggtcggc gtgcgcgacg tctacctgca caccatcgct gcgctgcgct
     1201 cgcgccggct accgacccac gacgtctcgt cgcgggtgcg gctcaccaag tcgccggagc
     1261 agtacctgga ggcgcgagag aagcgccgcg agcttcccta cgaagcgctg ctcgcgaacg
     1321 gccgcgagac gtggagcgtg ggcgaccgca ttcgggtgta tcgccggcgg aacggcgagg
     1381 gcgggctcgt cgcgccgaac gacgacgtgg cccccctccc cgatccgcac gactacgacg
     1441 tggagtacta cgtgcgcctg ctgcgcgaca cctacgccga gcggctggcg cgcgccttct
     1501 ccgcggagga cttttccgtg gtgttcgccg atcccgacca gctctccctg ttcgctccgt
     1561 ccgtcgaggc gatccgcccc atcctgtgcg cgggaccgcg atgagcacgt cgagcaccct
     1621 cgtccttctc tattgcatct cgaccgcggt cgccatcgcc gtgcgccggc tgcgcgtgcc
     1681 gttcaccgtc gccctcgtga tcgtggggct ggtgctcggc tccctgcacc tggtcgcgcc
     1741 gccgcacctc acgcgcgagc tgctgttcac gttctttctt cccgggctgt tgttcgaggc
     1801 ggcattccac ctcgacctgc cggccttccg cgcctggtgg cgttcggcgc tcggcctggc
     1861 cgtgcctggc gtgctggtgg cgatggggct caccgccgtg atggtcgccg cggcggggcg
     1921 cgcgctgggc ctgtcgcccg cgctggatct cacgctcggc ttcgtgttcg gcgcgctggt
     1981 ggcggccacc gaccccgtcg ccgtcacggc gatctttcgc gagacgcgcg cgccggcgcg
     2041 gctgggcgcg ctcgtggagg ccgagagcct gttcaacgac ggcaccggcg tcgtcttcct
     2101 ctcgctcgtg ctcgcctatg cactcggcac ggtgacgagt cccgtcgtga tcgccctcga
     2161 gttcgcgctc gtcgccggtg gaggggtgct ggtcggactc gtggtgggct gggtcatctc
     2221 gatggtgatc cgccgagtgg atgagccggc gatcgagatc gggctgaccg tgatcgccgc
     2281 gtacggctcc ttcgtgctcg ccgagcagct cggcgcgtca ggcgtgctgg cgaccgtggt
     2341 ggccggcatg atgtgcggtc ggcacggccg cgacctcggc atgtccgacg cgagccgcgc
     2401 ggcggtggcg acgttctggg agtacgtggc gtttgcgctc aactccatcg tcttcctgct
     2461 cctcggcttc agcttcgacg ccgcgcgtct cggcgcgatc tggccgctga tcatcgtcgc
     2521 cttcgtcgcg atgaccgtgg cgcgggccgc gatcgtgttc gcgacgctcg gcgtccagcg
     2581 cgtgcgcagc gaagggatgc cgtggtcgtg ggggacggtt atcaccctcg gcggcctgcg
     2641 cggggcgctg tcggtggtcc tcgcgctcgc gctcccggcg gagcttccgc agcgcgagct
     2701 ggtcgtatcc ctcacgatcg gggtggtgct gctctccatc gtcgtgcagg ggctgaccgt
     2761 gccgctcgtc atccgccgac tggcgctgga gagcgacacg ccccgtgacc gcgcgcccta
     2821 gccctcgcgc cacactacgt cgtacgccac ctgccacagg ccggcgccga gcgcgcgacg
     2881 ctccacttcg cgcacggtga cgtcgtgtcc cccggcgagc tcgagcgcct tggtggagta
     2941 gcccaggcag gccgggccaa gccagtcgag gaagatgtcc ggcacggtga agcgcagctc
     3001 ggcgcgctcg cgctgcgcca ccggcacctg cacctcgccc gccgtaaaga agcgcgacca
     3061 gagcttcggg aaattgccga tgacgaacga gggattcgcc aggcggaaga agaccttgta
     3121 gaacgagttc aggctccgct cggcgatgta cgcgtacatc gcggccacgg cacggtcgcc
     3181 gctcgcgttg atctcccgcg ccacggcggc ggtgaccgcc ttgaacgcgc cgaagtcgta
     3241 gctgctcacg gtgagcagcg gctgttccca gacgcgccgc tcctcgggac tcacgcgcgc
     3301 cagcgcccgt gcccacaccg cctccccgtg cgtgttgatc acgtactcgc gcgcgaggac
     3361 gaagttcacg ccacgcgcga tcgcggcggt cgagggggtg gagctggaca tcgggccgtt
     3421 cctgcgtcgg atgagggggt cgtgcactcc ctcgctggac gcgtggctcg tggggcgtgc
     3481 aacgaacctc aggcgtccgg attcgcccgc tcgcgccagc gttcgttccg gcaggtgttg
     3541 tcgcagaagg gaacctggcg agcgagcccg cagcggcaga gcgccgcgcg cgtgcccgtg
     3601 cggatgaggt gtccgtccaa cgcgcggagc tcgaggtccc cgcgcacgta cagcggcccg
     3661 ttccggatcg gcgtgagcga cgtcgggacg tccggcgctt cctgcgcacc gccgtcgtgg
     3721 cgcacgaagt ggagcgcacc ggttgggcac cgcaggaccg cctgcgcgat cgcatcggcg
     3781 tcggcggcgt ggacgtccac ccacgggcgg cgcttcgggt cgaacacctg cggcaggctc
     3841 cgcacgcagt tcgcgctgtg gatgcaccgc tcggcgtgcc attccacggt gatgcgatcg
     3901 gtggaatact cgcgcgtgac cggcggagcc tgattcggct ccgccgggtg cggcggcgct
     3961 tccgcggttc gggagggatc cgtcacgcta gctgctgctt ccccgccggt gcgcgcttcc
     4021 cgaactggag tcgggcttgc cgcggccaga gccgccgggc ttgttgccgc cgcccgtctg
     4081 cttgttgacg gtcgcccagg cacggcgctc cgcctcgtcc ttgcccacgc ccttcgactc
     4141 gtagccttcc tcgatgtgct gctccatccg cttctgcttg tcggtgtact tgtccttgtc
     4201 tccctgtggc atgtcgccct ccgcatgaac gagtgacacg ggcagtcgat gcaaagccgg
     4261 gacctccaag ctcggtgcca ggccctgccg tatgtcacca cgcaaccgcc gaccggctgt
     4321 cgggatccgg tagcccatcc gtgaagctgg ctaccagcaa gcgatagaag atccctgcac
     4381 tcgcttcgct cttgcgggat gacaacctac ttcgtgcgcg gccagtgatc gttggtggtg
     4441 tcggcgtcca tccagatccc gcccccgaac gtcacgctgc gcagggcctt ccgtgcgggg
     4501 aggctcacga cggcgcgccg accgttcgtc cgccagatcg ccgaggtctg gtggaaggtc
     4561 tcggtgctgc cgtccgccca cgtggcgacg aggtcgagcg gaaccggcat gcctccgacg
     4621 ttttcgagcg tcaccgcgta gcgccgtgcc tccttccgca cgtcgccgat cgcgacgtcg
     4681 atgtagccgt tgctgaagta ccaggcgttc cagaaccagt tcaggttgcg ccccgtgagg
     4741 tcgttcacgc tgttgaagaa gtcccagggg atgggatgct tgcccttcca gcgatccatg
     4801 tagccgtgca gcgccgtgcg aaagagcgag tcgccgagca tgtccttcag cgcgaggtag
     4861 ccgagcgccg gcttgccgta ggcgttgttg ccgtacgcgt tgccgtgcag cgcgtcggcg
     4921 ggggtgatga tcggcaggtc ctgcacgggg gagggatcgt tgatccaccg gccgacgcgg
     4981 aactcctgga aggcctgcgt cgcccgcgcc gcgcccaggt cggccgtgcc gatgaggtac
     5041 tcgaacgtcg tcgcccaccc ttcgtccatg aaggcgtagc ggctttcgtt gatgcccatg
     5101 tagaacggca tgtatgtgtg cgcgatctca tgctcggcga cgaaccgcga gaacaccgtg
     5161 tcgggatacg actcgtcgtt cgccatcatc gggtactcca tgccggcggg cccctgcacc
     5221 accgtcgtct tctcgtacgg atacgggacg cccggccagt tgtgcgacaa ccagtcgagg
     5281 gcgtgacggc cgtactgcac catgtgacga tagtcggcag cggtgtcgtt gtaggccgcc
     5341 tgcacgctcg cacggcgacg cgtcgcgtcg tccacctgca cgcttcccgc gtcccacacg
     5401 tagtggtcgc tcaggttgaa ggcgacgtcg gggatgtgac gcgccgaaaa gtgccaggcg
     5461 ttcaccgggc cggcagcggt cacgcgcttc gcgcgcacgt cgtcgagcgt ggcgacgtgg
     5521 atcgtcgaat ccgaggtcag cgactgctgg aagcgcgcga gcgacgcggg ctggagcacg
     5581 gccggggcgt tcctcagcgt gcccgtcccc cagacgacgt agttggcggg cacgttcagc
     5641 gtgacgtcgt agtcg
//
LOCUS       DASSYW010000792         2238 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1554499, whole genome shotgun sequence.
ACCESSION   DASSYW010000792 DASSYW010000000
VERSION     DASSYW010000792.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2238)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2238)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2238
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1554499"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            278..730
                     /locus_tag="VFN38_12655"
     CDS             278..730
                     /locus_tag="VFN38_12655"
                     /inference="COORDINATES: protein motif:HMM:NF016648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FecR family protein"
                     /protein_id="HET9012664.1"
                     /translation="MNKPPIALAVLVLVLGASPIRAQESSGAGRVKVASGAAFVVRGG
                     QSIPATPGQLVLEADVLRTGTDGRLGITLNDDTRLSLGPASEVRVARFAYGSSDGGLR
                     LVLKFFRGVTAYVSGRIAKLSPDAVRLETPAAIVGVRGTTLAIRVDEK"
     gene            727..1332
                     /locus_tag="VFN38_12660"
     CDS             727..1332
                     /locus_tag="VFN38_12660"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HET9012665.1"
                     /translation="MTDVRAVGWLLAGLALCGSACAAKGRAMVVLLPDSDKTVGRAGV
                     ENRAGSADLDDANEGARVRRNQRPVVFTLTDNEVQQMFGDALAALPPPPRRFALNFRF
                     ESDELTDEARGLVPGILALVRERPFADVMVTGHTDTMGTTGANFDLGLKRAMMVRNLL
                     IAAGLDAAQIQVTSLGETDLLVRTPDETPEPRNRRVDLVVR"
     gene            1398..>2238
                     /locus_tag="VFN38_12665"
     CDS             1398..>2238
                     /locus_tag="VFN38_12665"
                     /inference="COORDINATES: protein motif:HMM:NF017076.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHASE2 domain-containing protein"
                     /protein_id="HET9012666.1"
                     /translation="MIPTLFVAVLALYRPASVARLDNAVYDQTLRWAGTKPPADGVIV
                     VDVDERSLSKYGQWPWRRDVIARLVARLRAGGVSVVALDMIFAEADRGDQKSDDALAA
                     TLREGHVVLGYGLTFDTPSADHKPCVLHPFPVAVVERGAESDPFPFFRATGAICSLPH
                     LAGAAGSSGFLNAAPDRDGILRRVPVMAELDGRMYPSLALAAFSASQGVHDGIVEVST
                     VNSSLLSLAGRHVPLDGKANLLVRFRGSKRTFPYLSAADVLDGRIDPRALRDKVVLVG
                     TTAL"
BASE COUNT          347 a          762 c          766 g          363 t
ORIGIN      
        1 caacggggca gagaatcgac tgaaacgtca cagctcatcg taataccgac ttcgacctga
       61 cgcggcaacc caggggccag gtaccgagtg gaccggtctg gcgctttcga caccgcccca
      121 ggctccggcc cgtggcttgc tgccgtaacg agcgataccc gaaatccgcc gaaatcacgg
      181 gcaaaaacgt gcgggtgatc acagaactgt cgttcggtgt accaaaccgc catccccgcg
      241 cgcggcgcgg ccggctgacg ggcaggagct gtggaccatg aacaagcctc caatcgcgct
      301 tgcagtcctc gtgctggtgc tcggtgcttc gccgattcgc gctcaggaaa gttccggggc
      361 gggtcgcgtg aaagtggcgt ccggcgccgc gttcgtggta cgcgggggac agtcgatacc
      421 ggcgaccccc gggcagctgg tactcgaggc ggacgtactc cgcacgggca ccgatgggcg
      481 gctcgggatc acgctgaatg acgacacgcg cctgtcgctc gggccggcga gcgaagtccg
      541 cgtcgcccgt tttgcgtacg gatcctctga tggcggcctg cggctggtgc tgaagttctt
      601 tcgtggggtg accgcatacg tgtcagggcg catcgcgaag ctctcgcccg acgcggtccg
      661 cctcgagacg ccggcggcga tcgtcggcgt gcgaggtacc acgctggcca ttcgcgtcga
      721 cgagaagtga ccgacgtgcg tgcggtgggg tggttgctgg ccggattggc gctctgcgga
      781 agcgcctgtg ccgcaaaggg cagggcgatg gtggtgctgc tgcccgattc ggacaagacc
      841 gtcggacgcg ccggggtcga gaaccgggcc gggtcagcgg atctcgacga cgcgaacgaa
      901 ggggcccgcg tccgcaggaa tcagcgcccc gtcgtgttca cgctgaccga caacgaggtc
      961 cagcagatgt tcggcgacgc gctggccgcg ctgccgccgc ccccgcgccg gttcgccctg
     1021 aacttccgat tcgaatccga cgagttgacc gacgaggcgc ggggtctcgt accgggcatt
     1081 ctggcgctgg tgcgcgaaag gccgtttgcg gacgtgatgg tgaccggaca caccgatacc
     1141 atggggacca ccggcgccaa cttcgacctc gggctcaagc gcgccatgat ggtgcggaat
     1201 ctcctcatcg ccgcgggcct ggatgccgcg caaatccagg tcacctcgct cggcgagacc
     1261 gaccttctcg tgcgcacgcc ggacgaaacg cctgagcccc gcaatcgccg cgtcgacctc
     1321 gtcgtgaggt gaccgcgacc gtggccagaa cccgcgatat cgcggcgcgc agacggcggt
     1381 tcatcgttct cagcggcgtg attcccacgc tgttcgtcgc tgtcctggcg ctgtatcgtc
     1441 ccgcgtccgt cgcccgcctc gacaacgccg tgtacgacca gacgctgcgc tgggcgggaa
     1501 cgaaaccgcc cgccgacggg gtgatcgtcg tcgacgtcga cgagcggagc ctctcgaaat
     1561 acgggcagtg gccctggcgc cgcgacgtca ttgcccggct cgtcgcgcga ctgcgcgccg
     1621 gcggagtctc cgtggttgcg ctcgacatga tcttcgccga agcggaccgc ggcgatcaga
     1681 agagcgacga cgccctggcc gcgacgcttc gcgagggaca cgtggtcctc ggctacggtc
     1741 tcaccttcga caccccgtct gcagaccaca agccgtgcgt gctgcacccg ttccccgtgg
     1801 cggtcgtgga gcgaggtgcc gagtcggatc ccttcccgtt cttccgcgcg accggcgcca
     1861 tctgcagcct gccgcacctc gccggggccg cgggttcgtc gggattcctg aatgccgcgc
     1921 ccgatcgcga cggcatcctc cgccgggttc cggtgatggc ggagctcgac ggacgcatgt
     1981 acccgagcct ggcgctcgcc gcgttctccg catcgcaggg tgtgcacgac gggatcgtgg
     2041 aggtatccac cgtcaattca tcgttgctct cactggcagg acggcacgtc cccctcgacg
     2101 ggaaagccaa cctgctggtg cggttccggg gaagcaagcg gacgttcccg tacctgtcgg
     2161 ccgcggacgt gctcgacggc cggatcgacc ctcgcgccct gcgcgacaag gtcgtgctcg
     2221 tcggaacgac cgcactcg
//
LOCUS       DASSYW010000793         2396 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1098095, whole genome shotgun sequence.
ACCESSION   DASSYW010000793 DASSYW010000000
VERSION     DASSYW010000793.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2396)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2396)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2396
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1098095"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..267)
                     /locus_tag="VFN38_12670"
     CDS             complement(<1..267)
                     /locus_tag="VFN38_12670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012667.1"
                     /translation="MNAPPALHDAARALLRSLSGPHGIRASSSSSANYGAVFTRDAVM
                     AGIAGLLADDSTISDGLTRTLEHLRDLQGEQGQIPSNYQMGGTDG"
     gene            300..1676
                     /locus_tag="VFN38_12675"
     CDS             300..1676
                     /locus_tag="VFN38_12675"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HET9012668.1"
                     /translation="MRESAPIPATAAPQRPRLTFAQILNMNVGFFGIQYSFGLQQSNM
                     SPIYRYLGANEASLPLLWLAGPMTGLLVQPLIGAMSDRTLSPRGRRTPYFLIGAVLCS
                     IALLWMPFSPTLWMAAGLLWILDAGNNVTMEPYRAFVSDRLDRSQHSIGFLTQSAFTG
                     LGQTLSYLTPSVLVFAGLNRDRVNAHGIPLITVWAFIIGSVLSITSILWTVRTTPELP
                     LSAEERARMAAMPKGLASTLREVGGAIRDMPTTMKQLAVMKLFQWYAMFCYWQYIVLS
                     LAATLFHTHDAASPGFREAGLVNGQIGGFYNFVAFVAALALVPFTRRFGPKVMHAICL
                     TLAGCAMLSLPLITDRLWLFVPMIGIGLAWASMMANPYVMLAGCVPAERCGVYMGIFN
                     MFIVIPMMIQIFTLPLFYDAWLGGRPENVIRLAGGLLLCAAVAVLFVRLGADRPASDP
                     ALEPAFSG"
     gene            1744..>2396
                     /locus_tag="VFN38_12680"
     CDS             1744..>2396
                     /locus_tag="VFN38_12680"
                     /inference="COORDINATES: protein motif:HMM:NF013377.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004555 - alpha,alpha-trehalase activity
                     [Evidence IEA];
                     GO_process: GO:0005991 - trehalose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trehalase family glycosidase"
                     /protein_id="HET9012669.1"
                     /translation="MPSSRIRFGLLLLVCTAGTVGVGCATPAPPVVAATPRAADSLYD
                     PPRDLGQLFHDVQLARVFPDSKTFVDAKPRFAPADIVARYRAGAPSDLKAFVEANFEA
                     PRPAGEGVRADTAQAMEEHIRALWPALTRAPDVSDPRSSLIPLPRSYVVPGGRFREVY
                     YWDSYFTMQGLVESGRTDLVKSMLDNFAHLVSTVGHIPIANRTYYLSRSQPPYFAAMV
                     "
BASE COUNT          336 a          866 c          776 g          418 t
ORIGIN      
        1 accgtcggtg ccgcccatct ggtagttgga cggaatctgt ccctgctccc cctggaggtc
       61 gcgcaggtgc tccagcgttc gcgtcaggcc gtccgagatc gtagaatcgt cggcgagcag
      121 cccggcgatt cccgccatca cggcgtcgcg cgtgaagacg gcgccatagt tggcggagct
      181 cgacgacgag gcgcgaatgc cgtgcggtcc gctgagggag cggagcaggg cacgggcggc
      241 gtcatgcagc gcaggtggag cgttcacgaa ggccaactta gcgcgagggt cctgcacacg
      301 tgagagagag cgcacccatc ccggcgacgg ccgcacccca gcggccacgg ctcaccttcg
      361 cgcagatcct gaacatgaat gtcggattct tcggcattca gtacagcttc gggctccagc
      421 agagcaacat gagcccgatc taccgctacc tcggcgcgaa cgaggcgagc ctgcccttgc
      481 tctggctggc gggaccgatg accggcctgc tcgtgcagcc gctgatcggc gccatgagcg
      541 accgcacgct gagcccgcgc ggccgccgca cgccgtattt cctcatcggc gcagtgctct
      601 gcagcatcgc cctgctgtgg atgcccttca gcccgacgct gtggatggcg gccggcctcc
      661 tctggatcct cgacgccggc aacaacgtga cgatggagcc ctatcgcgcc ttcgtgagcg
      721 accggctcga ccgcagccag cactcgatcg gcttcctcac ccagagcgcg ttcacggggc
      781 tcgggcagac gttgtcctat ctcacgccgt cggtcctcgt cttcgcgggg ctgaaccgcg
      841 accgggtgaa cgcgcacggc attcccctca tcaccgtctg ggcgttcatc atcggctcgg
      901 tgctgtcgat cacctcgatc ctgtggaccg tgcgcacgac gccggagctg ccgctctcgg
      961 ccgaggagcg ggcgcggatg gcggcgatgc cgaaggggct cgcgtcgacg ctgcgcgagg
     1021 tcggcggcgc gatccgcgac atgccgacga cgatgaagca gctcgccgtg atgaagctct
     1081 tccagtggta cgccatgttc tgctactggc agtacatcgt cctttccctg gcggcgacgc
     1141 tcttccacac ccacgacgcg gcgagccccg gcttccgcga ggcgggcctc gtgaacgggc
     1201 agatcggcgg cttctacaac ttcgtcgcgt tcgtggccgc gctggcgctg gtgccgttca
     1261 ctcggcggtt cggtcccaag gtgatgcacg ccatctgcct caccctcgct ggatgtgcca
     1321 tgctctcgct cccgctcatc accgaccggc tctggctctt cgtgccgatg atcggcatcg
     1381 ggctcgcgtg ggcgagcatg atggcgaacc cgtacgtgat gctcgcgggg tgcgtgccgg
     1441 cggagcggtg cggcgtgtac atggggatct tcaacatgtt catcgtcatc ccgatgatga
     1501 tccagatctt caccctgccg ctcttctacg atgcgtggct cggcggccgg cccgagaacg
     1561 tgattcgcct ggccggcggg ctgctcctct gcgccgcggt cgccgtgctg ttcgtgcgcc
     1621 tcggcgcgga tcggccggca tccgaccccg cactcgagcc cgcattctct ggctaggccg
     1681 ccgcggagcc ctatactcaa cgccgtctcc cctggccgtc ccccgctccc ccacgtcgcc
     1741 accatgccct cgtcccggat ccgcttcggc ctgctcctgc tcgtctgcac cgccggcacg
     1801 gtcggcgtcg gctgcgcgac gcccgcgccc ccggtcgtcg cggccacgcc cagggcggcc
     1861 gactcgctgt acgatccgcc gcgcgatctc gggcagctct ttcatgacgt gcagctcgcg
     1921 cgcgtctttc ccgactccaa gaccttcgtc gacgcgaagc cacggttcgc tccggcggac
     1981 atcgtggcgc gatatcgtgc cggcgcaccc tcggacctga aggcgttcgt ggaggcgaac
     2041 ttcgaagcgc cgcgtccggc gggcgagggc gtgcgcgccg acaccgcgca ggcgatggag
     2101 gagcacatcc gcgcgctctg gccggcgctc acccgtgccc ccgacgtctc cgatccacgg
     2161 tcgtcgctca tcccgctgcc caggtcgtac gtggtgcccg gcgggcgctt ccgcgaggtc
     2221 tactactggg actcgtactt cacgatgcag gggctggtgg agagtggacg caccgacctc
     2281 gtaaagagca tgctcgacaa cttcgcgcac ctcgtgtcga cggtgggaca catcccgatc
     2341 gcgaaccgca cctactacct gagccgcagc cagccgccct acttcgcggc gatggt
//
LOCUS       DASSYW010000794         3642 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_320221, whole genome shotgun sequence.
ACCESSION   DASSYW010000794 DASSYW010000000
VERSION     DASSYW010000794.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3642)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3642)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3642
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_320221"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..748)
                     /locus_tag="VFN38_12685"
     CDS             complement(<1..748)
                     /locus_tag="VFN38_12685"
                     /EC_number="3.2.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sialidase family protein"
                     /protein_id="HET9012670.1"
                     /translation="MKLLHLAAFLVVAGCARGDAPRFRAAEQLAPGGDVGTAPMFAVS
                     RDAAEAAAWISAPGGGSDGRLNVRVADGRIATLQDSLGPIEPHGESPPKLAWSSDGAL
                     NALYVVARLVPGRRFPASALRFVRSTDKGATWSAPVTVTDDSAFGSHNFHALYAAPDG
                     ALYASWLDGRTGKSTVFMTRSADGGRTWLPNVRVTTSEACPCCRTTMASGPDGTLYLA
                     WRRVLPDNVREVVVAHSADRGATWSEPVRAQ"
     gene            complement(1030..3369)
                     /locus_tag="VFN38_12690"
     CDS             complement(1030..3369)
                     /locus_tag="VFN38_12690"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HET9012671.1"
                     /translation="MAPRALVASLILLLGTFAPSTLDAQSTAILAGRVTLDGTPAADV
                     AVFLAGTTRGTVTGDDGRYQIAGIAPGSYIVVTQRIGAATQRSPLTIAEGERATLDVG
                     LVTATTLLTPMTVSATRELRRRDEGSATIDVMDGAELRRSHASHPSGVMNRIPGVHVS
                     ELSGVGHSMSMRQPITTKPMYLYLEDGIPTRATGFFNHNALYEVNIPQAAGIEVLKGP
                     GTALYGSDAIGGVVNVLTRPAPLTPGLEASLEGGAYGYGRVLLSGGGTRAGDGLRADL
                     NLTRSENWKQQSPFERQSGTVRWDHTASSGWTARTVVTGSHVDQQDVPPLSTALFDTS
                     RALNLAPIAYRRVKALRVSSAIEREQGAGLWSVTPYARYDDMELLPSWQLTYDPQTWD
                     TKNTSAGLLTKYRRDFAPWRARVIAGADAEVSPGSFLAQRAVVTRTGAARAFTSYTAG
                     ETQYDYDVTYRSASPYVHTEASPFSRQGALLGALRVDAGLRLDFSGYSYTSRLAPLDT
                     GAHRRPANTTRAYAHLSPKLGATLTLDSATSVFASYRHGFRAPSQGQLFQQNSAANTV
                     DLAPVKVDAFEVGLRGRFGWRATWQLSAYDMLVRDDIITYVTASNTREANNAGRTRHR
                     GIEAGASAALTSALRVDASWSVSRQTYVEWTPQSATAMTAAVSYSGNLIENAPRDLGS
                     VFLAWSPTALRGGRLALEWSHTGGYATDPANTHAYAGYELLNMYASGSISARTELFGR
                     VTNLANAAYAELVTYDSFQKDQITPGAPKSLYVGLKTSW"
BASE COUNT          541 a         1191 c         1368 g          542 t
ORIGIN      
        1 gctgcgcccg caccggctcg ctccacgtcg cgccgcgatc ggccgaatgc gccaccacga
       61 cttcgcgcac gttgtcggga aggacgcgcc gccaggcgag gtagagcgtg ccgtccggtc
      121 ccgacgccat cgtcgtccgg cagcacgggc acgcttcgct cgtcgtgacg cgcacgttgg
      181 gcagccaggt gcgtccgccg tcggcgctgc gcgtcatgaa cacggtggac ttgcccgtgc
      241 ggccgtcgag ccacgaggcg tacagcgcgc cgtcgggcgc ggcgtacagg gcgtggaagt
      301 tgtgggagcc gaacgccgag tcgtcggtca cggtgacggg ggcgctccac gtcgccccct
      361 tgtccgtcga tcgcacgaag cgcaatgcgc tggcgggaaa gcggcgcccg ggcacgagcc
      421 tggctacgac gtacagcgcg ttgagcgccc cgtcggaaga ccaggcgagc ttgggcggcg
      481 attcgccgtg cggctcgatg gggccgagcg aatcctgcag cgtcgcgatg cgcccgtcgg
      541 cgacgcggac attgagccgt ccatcgctgc cgccgcctgg tgccgagatc cacgcggccg
      601 cctcggccgc gtcgcgcgac acggcgaaca tcggcgcggt gccgacgtca ccgccgggcg
      661 cgagctgctc cgccgcgcgg aagcgcggcg catcacctct cgcgcagccg gcgacgacga
      721 gaaatgcggc gaggtggaga agcttcatcg aagggaaaag gaatgagtgg catggaagat
      781 caaagccgca gcaacgacag caaccacaac ggcaacggca agtgcaacag caatggctgt
      841 ttgaacgcag atgacgcgga ctacgcagat gacgcagaac gcagaggcgc ccttgctcta
      901 ttccagcctg gctctcgtga gttcgccgtc ttgcatgatc agcgaaatct gtgaaatctg
      961 cgttccttca gttctgttgc tcttgcatcg tccgattcag ctgtggtcag tcgtgctgac
     1021 tgaagcacat caccacgaag tcttcagtcc gacgtacagc gacttcggtg caccgggcgt
     1081 gatctggtcc ttctggaagg agtcgtacgt caccagctcc gcgtacgcgg cgttcgcgag
     1141 gttcgtcacg cgcccgaaca gctccgtgcg ggccgagatg ctgccgctcg cgtacatgtt
     1201 gagcagctcg tagccggcgt aggcgtgcgt gttggcggga tcggtggcgt agcccccggt
     1261 gtgcgaccac tccagcgcga gccgtccgcc gcgcagcgcg gtgggcgacc aggcgaggaa
     1321 gacgctgccg aggtcgcgcg gcgcgttctc gatgagattg cccgagtacg acaccgctgc
     1381 cgtcatcgcc gtggccgact gcggcgtcca ttccacgtac gtctggcgcg acaccgacca
     1441 gctcgcgtcg acgcgcagtg cgctcgtgag cgccgcgctc gcgcctgcct cgatgccgcg
     1501 gtgccgagtg cggccggcgt tgttcgcctc gcgggtgttg ctcgccgtga cgtacgtgat
     1561 gatgtcgtcg cgcacgagca tgtcgtacgc cgagagctgc caggtggcgc gccagccgaa
     1621 ccggccgcgc aggccgacct cgaaggcgtc gaccttcacc ggcgcgaggt ccaccgtgtt
     1681 tgcagcggaa ttctgctgga aaagctggcc ctgtgagggc gcgcggaagc cgtgccggta
     1741 cgacgcgaac acgctcgtcg ccgaatccag ggtgagcgtg gcgccgagct tggggctcag
     1801 gtgcgcgtag gcgcgcgtcg tgttggcagg ccggcggtgc gcacccgtat cgagcggcgc
     1861 gaggcgcgac gtgtacgaat agccgctgaa atccaggcga agacccgcgt ctacgcgaag
     1921 cgcgcccaga agcgcgccct gtcgggaaaa gggcgacgcc tcggtgtgca cgtacgggga
     1981 cgcgctgcgg taggtgacgt cgtagtcgta ctgcgtctcg cccgcggtgt acgaggtgaa
     2041 cgcccgcgcc gcaccggtgc gcgtcacgac ggcgcgctgg gcgaggaagc tgcccgggct
     2101 cacctcggcg tcggcgccgg cgatgacgcg ggcgcgccag ggcgcaaaat cccggcgata
     2161 cttggtgagc agaccggccg acgtgttctt cgtgtcccac gtctgcgggt cgtacgtgag
     2221 ctgccaggac ggaaggagct ccatgtcgtc gtagcgcgcg tacggcgtca cgctccacag
     2281 gccggcaccc tgctcccgct cgatggcgga cgagacccgg agcgccttca cccggcgata
     2341 cgcgatgggc gcgaggttga gcgcgcggct ggtgtcgaac agcgcggtgc tgaggggggg
     2401 cacgtcctgc tggtccacgt gcgagcccgt gacgacggtg cgcgccgtcc agcccgatga
     2461 cgcggtgtgg tcccagcgga ccgtgccgct ctgccgctcg aacggcgact gctgcttcca
     2521 gttctcgctg cgcgtgagat tgaggtcggc gcgcaggccg tcgccggcgc gggtgccgcc
     2581 gccggagagc aggacgcggc cgtagccgta cgcgccgccc tcgaggctcg cctcgagacc
     2641 gggcgtgagc ggggccggtc gggtgagcac gttcacgacg cccccgatgg cgtcgctccc
     2701 gtagagcgcg gtgcccgggc ccttgaggac ttcgatcccc gccgcctgcg ggatgttgac
     2761 ctcgtacagc gcgttgtgat tgaagaagcc ggtcgcgcgc gtcgggatgc cgtcctcgag
     2821 atagaggtac atcggcttcg tcgtgatcgg ctggcgcatc gacatgctgt gccccacgcc
     2881 cgaaagctcg gagacgtgca cgcccgggat gcgattcatg acgcccgacg ggtgcgaggc
     2941 gtgggagcgg cggagctccg caccgtccat gacgtcgatc gtggccgacc cttcgtcgcg
     3001 gcgccggagc tcgcgggtgg cgctcaccgt catcggcgtg agcagcgtcg tcgcggtgac
     3061 gaggccgacg tcgagcgtgg cgcgctcacc ctcggcgatg gtgagcggcg agcgctgcgt
     3121 cgccgcgccg atgcgctggg tgaccacgat gtagctgccg ggcgcgatgc cggcgatctg
     3181 gtacctgccg tcgtcgcccg tgacggtgcc gcgggtggtg ccggcgagga agacggcgac
     3241 gtcggccgcc ggcgtgccgt cgagggtgac gcggccggcg aggatggcgg tggactgcgc
     3301 gtcgagcgtg ctcggcgcga aggtgccaag caggaggatc agcgatgcga ccagggcacg
     3361 gggtgccatg acgcctccat tcgttcgatt ggacctggaa gagcggccgc cacgaaggtg
     3421 gcggcggtga acgcggtgac gggcgtccgg cgcacgaagg cgcaggacgg gtcaggcggt
     3481 cgggggtccg ttcgcgaagg gaagtcggag gtcgggggac gccggggcgt cggccgacgg
     3541 acaggccagc gggtgctgga cctcggccac cgcggcgggc acgtgcacgg ccggctcggt
     3601 ggggatgggc gccacgctcg acgccgcaca gcagtgtccg ac
//
LOCUS       DASSYW010000795         2217 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1431650, whole genome shotgun sequence.
ACCESSION   DASSYW010000795 DASSYW010000000
VERSION     DASSYW010000795.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2217)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2217)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2217
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1431650"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..264
                     /locus_tag="VFN38_12695"
     CDS             <1..264
                     /locus_tag="VFN38_12695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012672.1"
                     /translation="ANQTYIYLADGRNMKIRILRRDTLEELTNFGDGGRQPGQFYAPH
                     SVAVDSKGNLYTTETYEGKRVQKFAYKGMRPVSVKDQGVVWPR"
     gene            252..>2217
                     /locus_tag="VFN38_12700"
     CDS             252..>2217
                     /locus_tag="VFN38_12700"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HET9012673.1"
                     /translation="MAAVKAAKLAASGLLAGVLGASSFAQAPPPAAAAKGEWRTYGSD
                     LASTRYSPLDQITAANFDKLEVAWRFKTDNLGPTPEYNFQSTPLMVGGVLYTTAGSRR
                     AVVAIDAATGETLWVHRYPEGARADEAPRKLSGRGLSYWTDGRVERILYVTIGYQMVA
                     LDAKTGQRVPNFGKSGVVDLKLEDDQEMDPVTGDIGLHAAPLIVKDTIIIGAAHTEGS
                     RPVSRRNDKGYVRGYDVRTGKRLWIFHTIPRPGEFGYDTWQGGSEEYTGNTGVWAQMS
                     ADPELGLVYLPVEMPTGDYYGGHRPGAGLYGESLVALDVKTGKRKWHYQFIKHGIWDW
                     DLPCAPILADVTIDGRARKIVMQPSKQGWLYVFDRVTGEPIWPFEERKVEASDVPGEI
                     ANPTQLFVVKPPAYERQGVSLDDLIDFTPALKAEGQKLASRFKLGPMFTPPVVSKWDG
                     PLATLMLPNVTGGANWQGGSFDPEHGIFYIFTNTGISDLGLVPGDMYKSDMKYVRGQA
                     QNPANPKAPPVPLTVQGLPLTKAPYGRITAIDLKTGTLAWQVAHGETPDNIRNHPALK
                     GVTIPRTGRQGRIGTLVTKSLLIAGEGGVFTLPDGRRGAMLRAYDKATGKDAGAVYMP
                     AGQTGSPMTYMLGGQQYIVVAVAGQGFPGEL"
BASE COUNT          396 a          731 c          795 g          295 t
ORIGIN      
        1 gcgaaccaga cctatatcta cctggccgac ggccggaaca tgaagatccg gatcctgcgg
       61 cgcgacacgc tcgaggagct gacgaacttc ggcgacggcg gccgccagcc cgggcagttc
      121 tacgcgccgc acagcgtcgc cgtggactcg aagggcaatc tctacacgac ggaaacctac
      181 gaggggaagc gggtgcagaa gttcgcctac aaggggatgc ggccggtatc ggtgaaggat
      241 cagggggtgg tatggccgcg gtaaaagccg caaagctcgc cgcgtcgggg ctgctcgccg
      301 gcgtgctcgg cgcgtcgtcg ttcgcgcagg ctccgccgcc ggcggcggcg gccaaggggg
      361 aatggcgcac ctacggcagc gatctcgcga gcacgcgcta ctcgccgctg gatcagatca
      421 cggccgccaa cttcgacaag ctcgaagtgg cgtggcggtt caagaccgac aacctggggc
      481 cgacgccgga atacaacttc cagtccacgc cgctgatggt gggtggcgtg ctctacacga
      541 ccgcgggatc gcggcgcgcc gtcgtggcga tcgacgccgc cacgggtgag acgctctggg
      601 tgcaccgcta ccccgaaggc gcgcgcgccg acgaggcgcc gcgcaagctg tcgggccgcg
      661 ggctctcgta ctggaccgac gggcgcgtgg agcggattct ctacgtgacg atcggctacc
      721 agatggtggc gctcgacgcc aagaccggtc agcgcgtgcc gaacttcggc aagagcggcg
      781 tggtcgatct gaagctcgaa gacgaccagg agatggaccc ggtgaccggc gacatcggcc
      841 tgcacgcggc gccgctcatc gtgaaggaca cgatcatcat cggcgcggcc cacaccgagg
      901 ggagccgccc ggtgagccgg cgcaacgaca agggctacgt gcgcggctac gacgtgcgca
      961 ccggcaagcg cctgtggatc ttccacacca tcccgcgccc cggtgagttc ggctacgaca
     1021 cgtggcaggg cggatcggag gagtacaccg gcaacaccgg cgtgtgggcg cagatgagcg
     1081 ccgaccccga gctgggcctc gtgtacctgc cggtggagat gccgaccggc gactactacg
     1141 gcggccaccg gcctggcgcc ggcctctacg gcgagagcct cgtcgccctc gacgtgaaga
     1201 ccggcaagcg gaagtggcac taccagttca tcaagcacgg tatctgggac tgggacctgc
     1261 cgtgcgcccc gatcctggcc gacgtgacga tcgacggccg cgcgcgcaag atcgtcatgc
     1321 agccaagcaa gcaggggtgg ctgtacgtct tcgaccgcgt caccggcgag ccgatctggc
     1381 cgttcgagga gcgcaaggtc gaggcgtcgg acgtgccggg ggagatcgcg aatccgaccc
     1441 agctcttcgt ggtcaagccg ccggcgtacg agcggcaggg cgtgagcctc gacgatctga
     1501 tcgacttcac gccggcgctg aaggcggaag ggcagaagct ggcgtcgcgc ttcaagctgg
     1561 ggccgatgtt cacgccgccg gtggtgagca agtgggacgg cccgctggcc acgctgatgc
     1621 tgcccaacgt gacgggcggc gccaactggc agggcggctc gttcgacccg gagcacggca
     1681 tcttctacat cttcaccaac accggcatct cggacctggg cctcgtcccg ggcgacatgt
     1741 acaagtccga catgaagtac gtgcgcggcc aggcgcagaa ccccgccaac ccgaaagcgc
     1801 cgccggtgcc gctcaccgtg caggggctgc cgctgacgaa ggcgccttac ggtcgcatca
     1861 ccgccatcga cctcaagacc gggacgctgg cgtggcaggt ggcgcacggc gagacgccgg
     1921 acaacatcag gaaccacccg gcgctgaagg gcgtcacgat tccgcggaca ggccggcagg
     1981 ggcgcatcgg cacgctcgtg accaagtcgc tgctcatcgc gggcgaaggc ggcgtgttca
     2041 cgctgcccga cggacgccgc ggcgccatgc tgcgcgccta cgacaaggcg accgggaagg
     2101 atgcgggcgc ggtctacatg ccggccgggc agacggggtc gccgatgacc tacatgctcg
     2161 gcggtcagca gtacatcgtg gtggccgtcg ccgggcaggg atttccggga gagctga
//
LOCUS       DASSYW010000796         4089 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1046840, whole genome shotgun sequence.
ACCESSION   DASSYW010000796 DASSYW010000000
VERSION     DASSYW010000796.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4089)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4089)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4089
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1046840"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1009)
                     /locus_tag="VFN38_12705"
     CDS             complement(<1..1009)
                     /locus_tag="VFN38_12705"
                     /inference="COORDINATES: protein motif:HMM:NF003716.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium/proton antiporter"
                     /protein_id="HET9012674.1"
                     /translation="MTGGEPLATAVILTAFGLLLAASVGLSRVSARLGLPVALLFLLV
                     GVLAGSEGIGHIAFEDYGFAFRVGTTALVLILFDGGLNTSFSSAREVLGPSVLLATVG
                     VLATTGLVAVAAHAFGLSWSMALLLGAIVSSTDAAAVFSVLRASGTRLRRKVGLTLEV
                     ESGLNDPMAVILTTAVTAAIVSGRGLSVGGVTTDVLSELVIGGAAGYVIARAGRMLIL
                     RVHLPAAGLYPAFTLALACLSFGLTTLLHGSGFLAVYVTGMTLGSGALPHAVGIRRVH
                     DALGWLSQVLMFLLLGLLVFPARLWQVAAVGLTLALFLALVARPLVVMLCLAPFRYRW
                     RD"
     gene            complement(1006..1686)
                     /gene="trmD"
                     /locus_tag="VFN38_12710"
     CDS             complement(1006..1686)
                     /gene="trmD"
                     /locus_tag="VFN38_12710"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: protein motif:HMM:NF000648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052906 - tRNA
                     (guanine(37)-N1)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HET9012675.1"
                     /translation="MRINVVTIFPEFLAAPLALSIPARAAAAGIVTYRLIDLRDYTHD
                     RHRTVDDAPYGGGAGMVMKPEPFFEAVDALQPTGPVVLMSARGHRFSQADAIRFAAGT
                     ELTLLCGHYKDVDQRVADHLATEELSLGDFVLSGGEPAALAVIDATVRLLPGAMSDHD
                     SAFSDSFWDRGLSAPSYTRPAEYRGHAVPEILLSGDHAKIAQWRVREGERLTRERRAR
                     DAGGEGAA"
     gene            complement(1683..2225)
                     /gene="rimM"
                     /locus_tag="VFN38_12715"
     CDS             complement(1683..2225)
                     /gene="rimM"
                     /locus_tag="VFN38_12715"
                     /inference="COORDINATES: protein motif:HMM:TIGR02273.1"
                     /note="Essential for efficient processing of 16S rRNA;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HET9012676.1"
                     /translation="MTTPAFIIVGRVRKAHGIRGDVVVEVITDEPDAVFASGRRVFAG
                     TATGDLAPRRQELHVAGVRPFNEGLLVRFDEVPDRNAAESWRGRYLLLPHDELPAPDD
                     EEVYVHELVGMRVELAGGEPVGTVEETYELPQGLALDVRRAAPREAETVMLPYDDRTI
                     ASVDKAARVIVVTPAEGLLE"
     gene            complement(2239..2559)
                     /gene="rpsP"
                     /locus_tag="VFN38_12720"
     CDS             complement(2239..2559)
                     /gene="rpsP"
                     /locus_tag="VFN38_12720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HET9012677.1"
                     /translation="MAVKIRLRRVGRKKSPMYRIVVADSKSPRDGKFIEIVGQYQPRT
                     GDKALNLETDRVNYWLNVGAQPTDTVRSLLRKAGLLKQRHETRLAEKLQARAVPVGDK
                     KDEA"
     gene            complement(2735..>4089)
                     /gene="ffh"
                     /locus_tag="VFN38_12725"
     CDS             complement(2735..>4089)
                     /gene="ffh"
                     /locus_tag="VFN38_12725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019902543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0048501 - signal recognition particle,
                     plasma membrane targeting [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005048 - signal sequence binding
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HET9012678.1"
                     /translation="MFDELTEKLEATFSRLRGRGVLTEADIKEGLREVRRVLLEADVN
                     FALTREFLERVEAKAVGVSQLRTVSPAQQLVKIVYDELTTMLGERREGLKLSSVPPTV
                     VMMVGLQGSGKTTSAAKLARKLKLEGRQVRLIAADVYRPAAIDQLETLGQQLDIPVYA
                     EKGQADVIRIARNGIDVARRARDRVVLVDTAGRLQIDDEMMNELVRLKEAIKPDEILL
                     VADGMTGQDAVKIAQGFDAKLGVTGVILTKMDGDARGGAALSIYGVLKKPIKYIGVGE
                     KSDALEDFHPDRMAGRILQQGDIVTLVEKAQGAFDADEAKRMEKKVRKEGMDLEDFLT
                     AMRQIEKLGPLEGLLKMMPGVNSKMLKQVKEADPKRMKHMEAIVLSMTKAERKKPDVM
                     NGSRRARVAKGSGRPIQEVNRLLEQFREMQKMMKKAAGGSGPGGGRMRMPPGMFGGMR
                     "
BASE COUNT          602 a         1451 c         1434 g          602 t
ORIGIN      
        1 agtcgcgcca ccggtaccgg aagggggcga gacagagcat caccaccagc ggccgcgcca
       61 cgagggcgag gaacagggcc agggtcagcc cgaccgccgc cacctgccac agccgcgccg
      121 gaaagacgag aaggccgagc aggaggaaca tgagcacctg gctgagccag ccgagcgcgt
      181 cgtgcacccg ccggatcccc accgcatgcg gcagcgcgcc gctgccgagc gtcatacccg
      241 tgacgtacac cgcgaggaag ccgctcccgt gcagcagcgt ggtgaggccg aacgagaggc
      301 acgccagcgc gagggtgaac gccggataca gccccgccgc cggcaggtgc acgcggagga
      361 tgagcatgcg gccggcgcgc gcgatgacgt agcccgccgc cccgccgatc accagctcgc
      421 tcagcacgtc ggtggtcacg ccgcccaccg acagtccgcg accgctcacg atggccgccg
      481 tgacggcggt ggtgaggatc accgccatcg gatcgttcag ccccgactcc acctcgagcg
      541 tgagccccac cttccggcgc agccgcgtgc cgctcgcccg gagcacggag aacaccgcgg
      601 cggcgtcggt ggacgacacg atggcgccga ggagcagcgc catcgaccac gagagcccga
      661 acgcgtgcgc cgccaccgcc acgaggccgg tggtggccag cacgcccacc gtcgccagca
      721 gcaccgacgg acccaggacc tcgcgcgccg acgagaagct ggtgttcaac ccgccgtcga
      781 acaggatgag gacgagcgcg gtcgtgccca cgcgaaaggc gaagccgtaa tcctcgaacg
      841 cgatgtggcc gatcccctcg ctgccggcca gcacgccgac gagcaggaag agcagcgcga
      901 ccgggagccc cagccgggcg gagacgcggc tcaacccgac gctggcggcg agcagcagcc
      961 cgaacgcggt gaggatcacc gcggtggcga gcggctcgcc gccggtcacg ccgcgccctc
     1021 gccgcccgcg tcgcgcgcgc gacgctcgcg cgtgagccgt tcgccctcgc gcacccgcca
     1081 ctgcgcgatc ttcgcatggt ccccggacag gaggatctcc gggacggcgt gaccgcggta
     1141 ctccgccggc cgcgtgtagc tcggcgccga caggccgcga tcccagaagg agtcgctgaa
     1201 cgcgctgtcg tggtcgctca tcgcgcccgg cagcaggcgc accgtcgcat cgatcaccgc
     1261 gagggcggcg ggctcgcccc cgctgagcac gaagtcgccg agcgacagct cctccgtggc
     1321 caggtgatcg gcgacgcgct ggtccacgtc cttgtagtgg ccgcagagga gggtgagctc
     1381 ggtgccggcg gcgaagcgga tggcgtcggc ctgcgagaag cgatgccccc gcgcgctcat
     1441 gagcaccacc ggcccggtgg gctgcagcgc gtcgaccgcc tcgaagaagg gctcgggctt
     1501 catcaccatc cccgccccgc cgccgtacgg cgcgtcgtcc acggtgcggt ggcggtcgtg
     1561 ggtgtagtcg cgcaggtcga tgagccggta cgtcacgatc cccgccgcgg ccgcgcgcgc
     1621 cgggatgctg agggcgagcg gggcggcgag gaactcgggg aagatcgtga cgacgttgat
     1681 cctcactcga gcagcccttc cgccggggtc acgacgatga ctcgcgccgc cttgtccacc
     1741 gaggcgatcg tgcggtcgtc gtacgggagc atgaccgtct ccgcctcgcg cggcgcggcg
     1801 cggcgcacgt cgagcgcgag cccctgcggg agctcgtagg tctcctccac cgtgcccacc
     1861 ggctccccgc ccgcgagctc gacccgcatc cccaccagct cgtgcacgta gacctcctcg
     1921 tcgtcgggcg cggggagctc gtcgtggggg agcaggagat agcggccgcg ccagctctcg
     1981 gccgcgttgc ggtcgggcac ctcgtcgaag cggacgagga gcccttcgtt gaacgggcgc
     2041 acgccggcga cgtgcagctc ctggcggcgc ggggcgaggt cgccggtggc ggtgccggcg
     2101 aatacacgac ggccggacgc gaagaccgcg tccggctcgt cggtgatcac ttccacgacg
     2161 acgtcgccgc ggatgccgtg tgccttccgg acccgcccga cgatgatgaa ggcgggcgtc
     2221 gtcatgagag cccggctctt atgcttcgtc cttcttgtcg cccaccggga cggcacgcgc
     2281 ctggagcttc tcggcgaggc gggtctcgtg gcgctgcttg agcaggccgg ccttgcggag
     2341 cagcgagcgg acggtgtccg tgggctgcgc gccgacgttc agccagtagt tcacgcggtc
     2401 ggtctcgagg ttgagcgcct tgtcgcccgt gcggggctga tactgcccga cgatctcgat
     2461 gaacttgccg tcgcgcgggc tcttggagtc ggcgacgacg atacgataca tgggcgactt
     2521 cttccggccc acacggcgaa ggcgaatctt gacggccact gggaactcct gactgggtgc
     2581 tgaaacgacc gggctcctcg cgcacctggg atttccaggc cgcacccggg acctaaaggt
     2641 aacaggtgaa cggtgatcgg tgaaccgtga acggttacca cggcagaccg aacaccgtgc
     2701 accgctcacc gctcaccttc tcccccgcac cgtcctaccg cattccgccg aacatcccgg
     2761 ggggcatgcg catcctgccg ccgccggggc cactccctcc ggcggccttc ttcatcatct
     2821 tctgcatctc gcggaactgc tcgaggaggc ggttgacctc ctggatgggg cggccgctgc
     2881 ccttggccac ccgggcgcgg cgcgacccgt tcatgacgtc cggcttcttc cgctcggcct
     2941 tcgtcatcga gaggacgatg gcctccatgt gcttcatgcg cttcgggtcg gcctccttca
     3001 cctgcttcag catcttgctg ttcaccccgg gcatcatctt gagcagcccc tcgagcggtc
     3061 cgagcttctc gatctggcgc atggcggtga ggaagtcctc caggtccatc ccttccttgc
     3121 ggaccttctt ctccatccgc ttcgcctcgt cggcgtcgaa ggcgccctgc gccttctcga
     3181 cgagggtgac gatgtcgccc tgctggagga tccggccggc catgcggtcg gggtggaagt
     3241 cctcgagcgc gtccgacttc tcgccgacgc cgatgtactt gatcggcttc ttcagcacgc
     3301 cgtagatgga gagcgcggcg ccgccgcggg cgtcgccgtc catcttggtc aggatcacgc
     3361 cggtgacgcc gagcttggcg tcgaagccct gggcgatctt caccgcgtcc tggccggtca
     3421 tgccgtcggc gacgaggagg atctcgtcgg gcttgatcgc ctccttgagg cgaacgagct
     3481 cgttcatcat ctcgtcgtcg atctgcagcc ggccggcggt gtccacgagg acgacgcggt
     3541 cgcgcgcgcg gcgcgcgacg tcgatgccgt tgcgggcgat gcggatgacg tccgcctgtc
     3601 ccttctcggc gtagacgggg atgtcgagct gctggccgag ggtctccagc tggtcgatgg
     3661 ccgcggggcg gtagacgtcg gcggcgatga ggcgcacctg ccgtccttcc agcttgagct
     3721 tgcgggccag cttggccgcg ctcgtcgtct tgcccgagcc ctggagcccg accatcatga
     3781 cgacggtggg cgggacggag ctgagcttga gcccctcgcg gcgctcgccg agcatggtgg
     3841 tgagctcgtc gtagacgatc ttgacgagct gctgggcggg agagacggtg cggagctgcg
     3901 agacgccgac ggccttcgcc tcgacgcgct cgaggaactc gcgggtgagc gcgaagttga
     3961 cgtccgcctc gagaaggacg cggcgcacct cgcgcagccc ctccttgatg tcggcctcag
     4021 tgaggacgcc gcgcccgcgc aggcgggaga acgtggcctc gagtttctcg gtcagctcgt
     4081 cgaacatag
//
LOCUS       DASSYW010000797         2753 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_310065, whole genome shotgun sequence.
ACCESSION   DASSYW010000797 DASSYW010000000
VERSION     DASSYW010000797.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2753)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2753)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2753
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_310065"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(64..1068)
                     /locus_tag="VFN38_12730"
     CDS             complement(64..1068)
                     /locus_tag="VFN38_12730"
                     /inference="COORDINATES: protein motif:HMM:NF013429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase family
                     protein"
                     /protein_id="HET9012679.1"
                     /translation="MPRPITLFTGQWADLPLETLAAKAKSWGYDGLELASWGDHFDVA
                     RALNEGGYCAARRAMLEQHGLKVFAISNHLVGQAVCDRIDERHKSILPPHVWGDGDPD
                     GVRRRAAEEMKATARAAARLGVKVVTGFTGSSIWPLLYSFPPVSPEMIDAGFRDFAER
                     WNPILDVFDEVGVRFALEVHPTEIAFDVSSAQRAVDAVGGRDAFGFNFDPSHLGYQGV
                     DYVQFIQRFGDRIHHAHMKDVWWSETPRPSGVFGGHLPFGHADRFWDFRSIGRGRIDF
                     EAIVRALNHVGYSGPLSVEWEDGAMEREFGAREACARLRAIEFPSSSVAFDAAFARDS
                     "
     gene            complement(1103..2266)
                     /locus_tag="VFN38_12735"
     CDS             complement(1103..2266)
                     /locus_tag="VFN38_12735"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HET9012680.1"
                     /translation="MPPVNVAVVGSGFMGAAHIDALRRVPGVQVVAIAALDLPRAQEL
                     AAQFGIPTVVSDWRALLERKDVHAVHNCTPNNLHFEVNKALIQAGKHVLSEKPLTMTS
                     AESGELVRLARDAGVVTAINFNYRGYPLVQQARAMVANGDLGDLFVVHGHYLQDWLAY
                     DTDYNWRLESKVSGASRAIADIGSHWFDLVQFVTGRKIVGVYAHLFRVHETRKKPKRA
                     VETYKGKEQGAPQDYDEARIDTEDGGFVLLELEGGLRGSLTVSQVSVGRKNRQWIEVD
                     GSRSAVSWDQENPNHLWIGHRDRANEILMKDPALLDASARGYAHYPGGHPEGYPDGPR
                     NLFGALYRYIAAGKKPGRDPADFPTFADGDAEVRIVEAVLRSHEGKQWVKVDH"
     gene            2515..>2753
                     /locus_tag="VFN38_12740"
     CDS             2515..>2753
                     /locus_tag="VFN38_12740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012681.1"
                     /translation="MPRRRTGRRALLVSLFPLAAWTLGCDAPTGPGDSNLLAFGSATS
                     GHLAPGETRRFEIEAPAGQGFVVYMDVTGGTLALEL"
BASE COUNT          393 a          999 c          926 g          435 t
ORIGIN      
        1 cggcgcggct ggtgagcgtc gcggcctgac cgaacgcatc acgctcgtcg gcgatcttcg
       61 ccgctacgag tcccgtgcga acgccgcgtc gaaggccacg ctcgacgacg ggaactcgat
      121 cgcccgcagg cgcgcacacg cctcgcgcgc gccgaactcg cgctccatcg cgccgtcctc
      181 ccactccacg gacagcggac ccgagtagcc gacgtgattc agcgcgcgca cgatcgcctc
      241 gaagtcgatg cggccccggc cgatggatcg gaaatcccag aagcggtcgg cgtggccgaa
      301 cgggagatgc ccgccgaaca cgccggaggg gcgcggcgtc tccgaccacc acacgtcctt
      361 catgtgcgcg tgatggatgc ggtcgccgaa ccgctggatg aactggacgt agtcgacccc
      421 ctgatagccg aggtggctgg gatcgaagtt gaagccgaag gcatcgcgcc cgccgaccgc
      481 atcgaccgcg cgctgcgccg aggagacgtc gaaggcgatc tccgtggggt gcacctcgag
      541 ggcgaacctc actcccacct cgtcgaacac gtcgagaatc ggattccatc gctcggcgaa
      601 atcgcgaaag ccggcgtcga tcatctcggg cgaaacaggc ggaaagctgt agagcagcgg
      661 ccagatggac gagccggtga agcccgtcac gaccttcacg ccgagccgcg ccgcggcgcg
      721 cgcggtcgcc ttcatctcct ccgcggcgcg gcgtcgcacc ccgtcgggat cgccgtcgcc
      781 ccacacgtgc ggcgggagga tgctcttgtg gcgctcgtcg atccggtcgc agacggcctg
      841 gccgacgaga tggttgctga tcgcgaacac cttcagccca tgctgctcga gcatcgcccg
      901 gcgcgctgcg cagtagccgc cctcgttcag cgcccgcgcc acgtcgaagt ggtctcccca
      961 cgaggcgagc tccaggccgt cgtagcccca gctcttcgcc ttcgcggcga gcgtctccag
     1021 cggcaggtcc gcccactggc cggtgaacag cgtgatcggt cgcggcatcg tctcgttcgg
     1081 ggtgatcgtg gatcgcgcgt cgctaatggt cgaccttcac ccactgcttc ccttcgtggc
     1141 tgcgcagcac cgcttccacg atgcgcacct ccgcgtcgcc gtctgcgaag gtggggaagt
     1201 cggcgggatc gcgccccggc ttcttcccgg ccgcgatgta gcggtacagc gcgccgaaca
     1261 ggttgcgcgg cccgtcggga tacccttccg gatggccgcc cgggtagtgc gcatacccgc
     1321 gcgcgctggc gtcgagcagc gccggatcct tcatcaggat ctcgttcgcg cgatcgcggt
     1381 ggccgatcca gaggtggttg ggattctcct ggtcccacga caccgcgctc ctgctcccat
     1441 ccacctcgat ccactgccgg ttcttgcggc ccacgctcac ctgcgagacg gtgagcgagc
     1501 cgcgcagccc gccctcgagc tcgaggagca cgaacccgcc gtcctccgtg tcgatgcgcg
     1561 cctcgtcgta gtcctgcggc gccccctgct ccttgccctt gtacgtctcc accgcccgct
     1621 tcggcttctt gcgcgtctcg tggacgcgga agaggtgcgc gtacacgccg acgatcttcc
     1681 ggccggtgac gaactgcacg aggtcgaacc agtgggagcc gatgtcggcg atggcgcgcg
     1741 acgcgccgct caccttcgac tcgagccgcc agttgtagtc ggtgtcgtac gcgagccagt
     1801 cctgcaggta gtgcccgtgc acgacgaaga ggtcgccgag gtcgccgttg gcgaccatgg
     1861 cgcgcgcctg ctgcaccagc ggatagccgc gatagttgaa gttgatcgcc gtcacgacgc
     1921 ccgcatcgcg ggcgaggcgc accagctccc ccgactcggc cgacgtcatg gtcaggggct
     1981 tttccgacag cacgtgtttg cccgcctgga tcagcgcctt gttgacctcg aagtgcaggt
     2041 tgttcggcgt gcagttgtgc accgcgtgca cgtccttccg ctcgagcagg gcgcgccagt
     2101 ccgacaccac ggtcggaatg ccgaactgcg cggcgagctc ctgcgccctc gggagatcga
     2161 gcgccgcgat ggcgacgacc tgcacccctg gcacgcgccg gagcgcatcg atgtgggccg
     2221 ctcccatgaa gccggagccg acgacggcga cgttcactgg tggcatcgtg tggtggctgg
     2281 ggggtggacg gcggcggtgc gactcgcccg agggaggtga acctacgcgc tgagggcgcg
     2341 gacgcctagc acccgcggcc ggtcgtcggc cggcgctcgg tcggggttcc tgcgctgtgc
     2401 cgacgatcac cgcctgcccc ggggcgcccg ggcacactgg aagcctgctt cgcggacgga
     2461 taccttctcg cccccatccc tccgcccgcc gcactcaccc tcgcatcgtc caggatgccg
     2521 cgtcgccgca ccggtcgccg ggccctgctg gtctcgctct tcccgctggc cgcctggacg
     2581 ctcgggtgcg acgcgccgac cggcccgggc gactccaacc tgctcgcatt cggcagcgcg
     2641 acgtcgggac accttgctcc cggcgagacg aggcgcttcg agatcgaggc gccggcgggc
     2701 cagggcttcg tcgtgtacat ggatgtcacc gggggaacgc tggccctcga gct
//
LOCUS       DASSYW010000798         2409 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1005847, whole genome shotgun sequence.
ACCESSION   DASSYW010000798 DASSYW010000000
VERSION     DASSYW010000798.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2409)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2409)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2409
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1005847"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..504
                     /locus_tag="VFN38_12745"
     CDS             <1..504
                     /locus_tag="VFN38_12745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004814 - arginine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006420 - arginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DALR anticodon-binding domain-containing
                     protein"
                     /protein_id="HET9012682.1"
                     /translation="SYVTVRELVDEVGRDAVRYFFLMRKGDSQLSFDVDLARSQSEEN
                     PVYYIQMAHARLAGIFRVGAIDPATISPDVDFSVLALPEETELMKALLDFPALVAGAA
                     EALEPHRVATYLHDTAGKIHLWYHKAHVLNEPEPITRARLLLARAAQIVMRNGLTMLG
                     ISAPDRM"
     gene            554..1471
                     /locus_tag="VFN38_12750"
     CDS             554..1471
                     /locus_tag="VFN38_12750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PfkB family carbohydrate kinase"
                     /protein_id="HET9012683.1"
                     /translation="MTVLVVGSVALDSVETPFGKADHVIGGSGTFFSASASHLSPVQL
                     VGVVGDDYPMAQLEPLAKRGVDMAGLEQATGESFRWRGRYRHELNSAETLETRLGVFS
                     HFSPKIPEQFRNAPFVFLANIDPRLQLDVLRQVQRPKLVACDTMNFWIESRRPDIVEL
                     IKHVDLITLNDGEARQLTDCANLVKAARWIMAHGPKMVIIKKGEHGAFLFKENSIFFA
                     PAYPLEEVFDPTGAGDSFAGGFMGYIARTGDLSDANLRRAVVYGSAMGSFAVEKFSVQ
                     RLLEITPADIVARVAEFRKLVAFEEELSA"
     gene            1468..>2409
                     /gene="purM"
                     /locus_tag="VFN38_12755"
     CDS             1468..>2409
                     /gene="purM"
                     /locus_tag="VFN38_12755"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004641 -
                     phosphoribosylformylglycinamidine cyclo-ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HET9012684.1"
                     /translation="MSADRPLDYSAAGVDLDRSDAVKRRIRAVVESTFTAGARGAFGG
                     FGGMFRIPAEVRRPVLVASADGVGTKLRVAIDAGRHDTVGHDLVNHCVNDILVQGAIP
                     LFFLDYFAAGVLVPEVVEAVVTGVAAGCRENGCSLVGGETAEMPGIYTPPDYDLAGFI
                     VGCVEEDAILGADRVEEGDVLVGLESNGLHTNGYSLARRIVFERMGLGVNDPFPGEQA
                     SVAEVLLRVHRSYLPVLRPALGRVHAMAHITGGGLPGNVNRALPDTLDAEIDGGSWEI
                     PNLFRQLEQAGQVDRAEMYRTFNMGVGMVVITDEAGAE"
BASE COUNT          360 a          827 c          831 g          391 t
ORIGIN      
        1 agctacgtca ccgtgcgcga gctggtggac gaggtgggac gcgacgccgt gcgctacttc
       61 ttcctgatgc ggaagggcga ttcgcagctc tccttcgacg tggacctcgc gcgctcgcag
      121 agcgaggaga atcccgtgta ctacatccag atggcccacg cccggctcgc ggggatcttc
      181 cgcgtcggcg cgatcgatcc ggccaccatc tcgccggacg tggacttctc cgtcctcgcg
      241 ctgccggagg agacggagct gatgaaggcg ctgctcgact ttcccgcgct cgtcgccggg
      301 gcggccgagg cgctggagcc tcaccgcgtc gcgacgtacc tgcacgacac cgcggggaag
      361 atccacctgt ggtatcacaa ggcccacgtg ctgaacgagc ccgagccgat cacgcgcgcg
      421 cggctgctgc tcgcgcgcgc cgcgcagatc gtgatgcgca acggcctcac gatgctcggc
      481 atcagcgcgc ccgaccgcat gtagcccgcc cgccccttcg ttcgctcgcc cgctcatccg
      541 ctctccccat ctcatgaccg tactcgtcgt cggctcggtg gcgctcgact ccgtggaaac
      601 gccgttcggc aaggccgacc acgtcatcgg cggctccggc accttcttct ccgcctcggc
      661 gagccacctc tcgcccgtgc agctcgtcgg cgtggtgggc gacgactatc cgatggcgca
      721 gctcgagccg ctggcgaagc gcggcgtcga catggcgggg ctggagcagg ccaccggcga
      781 gtcgttccgg tggcgcggcc gctaccgcca cgaactcaac tctgccgaga cgctggagac
      841 acgcctcggc gtgttctccc acttcagccc gaagatcccc gagcagtttc gcaacgcacc
      901 cttcgtcttc ctggcgaaca tcgacccgcg cctccagctc gacgtgctgc gccaggtgca
      961 gcgcccgaag ctggtggcgt gcgacacgat gaacttctgg atcgagagcc ggcggccgga
     1021 catcgtggag ctgatcaagc acgtcgacct catcacgttg aacgacggcg aggcacgcca
     1081 gctcaccgac tgcgccaacc tggtgaaggc ggcgcgctgg atcatggcgc acggcccgaa
     1141 gatggtgatc atcaagaagg gcgagcacgg tgccttcctg ttcaaggaga actcgatctt
     1201 cttcgcgccg gcctatccgc tggaggaagt gttcgatccc accggggcgg gggactcgtt
     1261 cgccggcggg ttcatgggct atatcgcccg cacgggcgac ctgagcgacg cgaacctgcg
     1321 ccgcgccgtg gtgtacggct cggccatggg ctcgttcgcc gtcgagaagt tctccgtgca
     1381 gcgcctgctc gagatcaccc cggccgacat cgtcgcccgt gtcgccgagt tccggaagct
     1441 cgtggcgttc gaggaggagc tgtccgcgtg agcgccgacc ggccgctcga ctactccgcc
     1501 gcgggggtgg acctcgaccg ctccgacgcg gtgaagcgcc gcatccgcgc cgtcgtggag
     1561 tccaccttca ctgccggggc gcgcggggcc ttcggcgggt tcggcgggat gttccgcatc
     1621 ccggccgagg tgcggcgccc ggtgctcgtc gcgagcgccg acggcgtcgg caccaagctg
     1681 cgcgtggcca tcgacgcggg ccgccacgac accgtgggcc acgacctcgt gaaccactgc
     1741 gtgaacgaca tcctggtgca gggagcgatt cccctcttct tcctcgacta cttcgccgcc
     1801 ggcgtgctgg tgccggaagt ggtggaggcg gttgtgaccg gcgtcgcagc gggatgccgg
     1861 gaaaatgggt gttcgttggt ggggggcgaa acggccgaga tgccggggat ctacacgccg
     1921 cccgactacg acctcgccgg cttcatcgtc gggtgtgtcg aagaagatgc gatcctcggc
     1981 gccgaccgcg tcgaggaggg cgacgtgctg gtggggctcg agagcaatgg actgcatacc
     2041 aacggttact ccctcgcgcg gcgcatcgtc tttgaacgga tgggactggg cgtgaacgac
     2101 ccctttcccg gcgagcaggc cagcgtggcg gaggtgctgc tgcgcgtgca ccgctcgtat
     2161 ctgccggtgc tgcgccccgc gctgggtcgc gtgcatgcga tggcgcacat caccggaggc
     2221 gggctgccgg gcaacgtgaa ccgtgcgctg cccgatacgc tggacgccga gatcgacggc
     2281 ggcagctggg agatcccgaa cctctttcgc cagctcgagc aggccggcca ggtggaccgg
     2341 gccgagatgt accgaacgtt caacatgggc gtcggcatgg tggtcatcac cgacgaggcg
     2401 ggcgccgag
//
LOCUS       DASSYW010000799         2742 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1470701, whole genome shotgun sequence.
ACCESSION   DASSYW010000799 DASSYW010000000
VERSION     DASSYW010000799.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2742)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2742)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2742
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1470701"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1075)
                     /locus_tag="VFN38_12760"
     CDS             complement(<1..1075)
                     /locus_tag="VFN38_12760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HET9012685.1"
                     /translation="MTEGARDAEAPLWAPTPDRGAATNIARFAAAARAAGYDPPDSAA
                     AVDYASLYDWSVAHPARFWPLVWRFCGVVADERSGGEPWTEVVRGVDRMAPPDPDAGP
                     RWFLGARLNFAENLLRYRDDHLALIARHEGGRGRALTYAELASEVADVASALRASGVS
                     VGDRVAGFIPNIPEAVIAMLATASLGAVWSSCSPDFGVQGVLDRFGQIEPKVLFCADG
                     YRYAGKEIDSLDRVREIVRHIPSIQRTVVVPYLHEAPAEFESWDDFSRPQRSTRCPVP
                     GPEAVRLPFDHPLYIMYSSGTTGLPKCMVHGAGGTLLQHLKELVLHTDLRREDRIFYF
                     TTCGWMMWNWLVSSLAVGATVVLY"
     gene            complement(1095..1589)
                     /locus_tag="VFN38_12765"
     CDS             complement(1095..1589)
                     /locus_tag="VFN38_12765"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF012478.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HET9012686.1"
                     /translation="MPHIRSIAGIAALATLAACDLSTAPNVPAPIDPAQDTYASALGV
                     NIASMTKTASGLYYKDKAVGSGTAAAANDSIRVNYTLWLTNGTKVDSSIDAGKPIEFR
                     VGDPTVIPGFSEGFVGMTPGGVRQLVIPTRLAWGSAGSAVPGKPVVPPNANVVFEIQY
                     LARL"
     gene            complement(1707..>2742)
                     /locus_tag="VFN38_12770"
     CDS             complement(1707..>2742)
                     /locus_tag="VFN38_12770"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alpha-hydroxy acid oxidase"
                     /protein_id="HET9012687.1"
                     /translation="ARERLGTMAYDYYVGGANDEVTVRENRLAYERLALRYHVLVDVR
                     RRSTKTTVLGEEIDFPVLVAPTAFQRLACDDGEIATARAAAASRTIMILSTPSTCTIE
                     DVGAVPGPKWFQLYVYADRGLTRGLVDRAESAGMKAVVLTVDAPVLGRRERDLRNRFH
                     LPDGIRLANVPSSGSVPLPSGQGQSGLANLFASGIDAGLTWRDVEWLRSITHLPVLIK
                     GIVRGDDASRAVDHGAAGIIVSNHGGRQLDTAIASVRALPEVAEAVDGRAEVLLDGGI
                     RRGTDVVKALALGARAVLVGRPVVWGLAAGGEEGARRVLDLLKDEVDVAMALCGCPTV
                     GDITRDLVVA"
BASE COUNT          457 a          947 c          924 g          414 t
ORIGIN      
        1 cgtagagcac caccgtcgcg ccgaccgcga gcgagctcac gagccagttc cacatcatcc
       61 acccacacgt ggtgaaatag aagatccggt cctcgcgcct gagatccgtg tgcagcacga
      121 gctccttgag atgctggagc agcgtcccgc cggcgccgtg caccatgcac ttcggcaagc
      181 cagtggtgcc tgacgagtac atgatgtaca gcgggtgatc gaacgggagt cgaacagcct
      241 cgggaccagg gactgggcac cgggtactcc gttggggacg ggagaagtcg tcccacgact
      301 cgaattcggc gggcgcctcg tgcaggtacg gaacgaccac ggttcgctgg atcgacggaa
      361 tatgcctaac gatttcgcgc acgcgatcca gcgagtcgat ctccttcccc gcgtatcgat
      421 atccgtccgc acagaacagg accttcggct cgatctggcc gaaccggtcc agcaccccct
      481 gcacgccgaa gtccggcgag cacgacgacc acacggcgcc gaggctcgcg gtcgcgagca
      541 tcgcgatgac ggcctccggg atgttgggga tgaagcctgc gacccggtcg ccgacactca
      601 caccgctcgc cctcagcgcg gacgcgacat cggcgacttc gctcgcgagc tccgcgtatg
      661 tgagtgcgcg tccgcgtccg ccctcgtgac gcgcgatgag cgccaggtgg tcgtcgcggt
      721 agcggagcag gttttcggcg aagttgaggc gagcgccgag gaaccagcgc ggcccggcgt
      781 cgggatcggg cggcgccatg cggtcgacgc cgcgaacgac ctcggtccac ggctcgccac
      841 ccgagcgctc atcggcgacg acgccgcaga agcgccacac cagcggccag aaccgcgccg
      901 gatgcgcgac cgaccaatcg tatagtgacg catagtcgac agccgccgcg ctgtccggag
      961 ggtcgtaccc ggcggcgcgt gcggctgcgg cgaatcgagc gatgttggtg gcggcacccc
     1021 gatcgggcgt cggcgcccac agcggcgcct cggcgtctcg agctccctcg gtcatgccgc
     1081 ggagcgcgcc gggatcagag gcgcgccagg tactgaatct cgaagacgac gttcgcgtta
     1141 ggcggcacga cgggcttgcc cggcacggcg ctgccggcgg atccccaggc cagcctggtc
     1201 gggatgacga gctgccgaac gccgcccggg gtcatgccga caaagccctc ggaaaacccg
     1261 ggaatcacgg tcggatcgcc gacgcgaaac tcgatcggtt tcccggcatc gatgctcgag
     1321 tcgaccttcg tgccgttcgt gagccacagg gtgtagttga cgcgaatcga gtcgttcgcc
     1381 gcggcggctg tccccgagcc gacggccttg tccttgtaat acagaccgct cgcggtcttc
     1441 gtcatcgacg cgatgttgac gccgagcgcc gacgcgtatg tgtcctgcgc cgggtcgatg
     1501 ggcgcgggca cgttcggcgc cgtgctgaga tcgcaggcgg cgagcgtcgc cagcgcggcg
     1561 ataccggcga tcgaacggat gtgaggcatg tatggtctcg accgatggaa ggttcgttgt
     1621 taggtagcca ctcgctcacg ggccgcgcaa gggcggctcg gcgaatggcg ttatgacggc
     1681 ggcgagtttg ctcggttgac cgagcgtcac gccaccacga ggtccctcgt aatgtcgccg
     1741 acggtcgggc agccgcacag cgccatcgcg acatcgacct cgtccttcaa caggtcgagc
     1801 actcggcggg cgccttcctc gccaccggcg gcaaggcccc acaccaccgg tcgtcccacg
     1861 aggaccgcgc gcgcgccgag tgcgagcgcc ttcaccacgt ccgttccgcg tcgaatgccg
     1921 ccgtccagga gaacctcggc gcgaccgtcc acggcctccg cgacctcggg cagcgctcgc
     1981 accgacgcga tcgccgtgtc gagctgacgg ccgccatgat tggagacgat gatgcccgcg
     2041 gcgccgtgat cgaccgcgcg gcttgcatcg tcgccgcgca cgatgccctt gatcagcact
     2101 ggcaggtgcg tgatcgaccg cagccactcc acgtcgcgcc acgtgaggcc ggcgtcgata
     2161 ccgctggcga aaagattggc gagaccggac tgcccttggc cgctcggcag cggcacgctg
     2221 cctgacgagg gcacgttcgc gaggcgaatg ccgtcaggca gatggaaccg attgcggagg
     2281 tcgcgctcgc gacggccgag cacgggcgca tccacggtca gcacgacggc cttcatcccg
     2341 gccgattccg cgcggtccac aagtcccctg gtgagaccgc ggtcggcgta gacgtacagc
     2401 tgaaaccact tcgggcccgg cacggcgccg acgtcctcga tcgtgcacgt cgatggcgtg
     2461 ctgagaatca tgatcgttcg cgaagccgct gccgcgcgcg cagtggcgat ctcgccgtca
     2521 tcgcacgcga gccgttgaaa cgcggtcggc gcgacgagca ccggaaagtc gatctcctca
     2581 cccagcaccg tggtcttcgt cgagcgacgt ctgacgtcca cgagcacgtg atagcgtagc
     2641 gccagtcgct cgtacgccag gcggttctcg cgcacggtca cttcgtcgtt cgcgccgccg
     2701 acgtagtagt cgtacgccat cgtgccgagc cgctcgcgcg cc
//
LOCUS       DASSYW010000800         2040 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_578126, whole genome shotgun sequence.
ACCESSION   DASSYW010000800 DASSYW010000000
VERSION     DASSYW010000800.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2040)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2040)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2040
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_578126"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            43..>2040
                     /locus_tag="VFN38_12775"
     CDS             43..>2040
                     /locus_tag="VFN38_12775"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HET9012688.1"
                     /translation="MRDDLQGAVRSLRSNRGFTFAALIVLTLGIGATTAIFSVVDAVV
                     LRGLPFDEHDRLVALGQRPAGTPSPAGLSRDPARLMFVAPQNYRDWAAQQQVFESMAA
                     IASGWLTLRLPGVAPESLVPQRVTAGFFKVLRVSPALGRTFTVENETAGADRVALLSD
                     ALWRRVFGADPHIVGRVIPLELLEGGRGADEAGYEVIGVMPPDFTYPVGAARPTDVWI
                     PYVVPETDRLRDPARMATYLQVIARLKPDVPVMQAQAQMDQIAAALERAHPVWNKDSR
                     IGVRPLVDHIVGAQITSWLLVLLAAVVMVLLIACANTASLLLARATVRERDLAVRAAL
                     GASWWHLVRQLLIETLVLSAAGAALGLVLAWWAVGVLRAAMPDGVPRVTTIALDLRVL
                     ATAVAVSVATALLCGIGPALQAARPDLSRAMRDTGRSGNSPRRQRLRDALVVAEVSLA
                     VVLLVGAALFIGSFVALTRIDPGFDATNVLTAQITPRIASLSAPADRTAALSEVVERI
                     GALPGVEHAALLLGQLPLTDGIRSTSFPLPDGTIARLSIKNVSPGYHAALRIPLRRGR
                     FFTAADRAGAPAVIILNEAAIAAYFPRQDPIGRTFNGATIVGVVGDARQNGVERDVIP
                     EIYSPLAQGQAAGAELLVRTAGDPYDSLRAIRAAVFAVLPDV"
BASE COUNT          266 a          715 c          691 g          368 t
ORIGIN      
        1 ctcacacgcg cggcactata ctcgcggcgg gggccttacg gcatgcgcga cgatctccag
       61 ggcgcggttc gatcgcttcg gtccaatcgg ggattcacgt tcgcggcgct gatcgtgctc
      121 acgctcggca tcggcgcgac gacggcgatc ttctctgtcg tcgacgcggt ggtcctgcga
      181 ggcctgccgt tcgacgagca cgatcgtctg gtagccctgg gccagcgtcc cgcaggtacg
      241 ccgtcgccgg cagggctgag tcgcgatccg gcgcgcctga tgttcgtcgc gccgcagaac
      301 taccgcgact gggcggcgca gcaacaggta ttcgaatcga tggcggccat cgccagcggc
      361 tggctgacac tccggctgcc gggagtggcg ccggaatcgc tggtcccgca acgcgtcacc
      421 gccggcttct tcaaggtgct gcgcgtctcc ccggcgcttg ggcggacgtt tacggtcgag
      481 aacgagaccg cgggcgccga tcgcgtggct ctgctcagcg atgccctgtg gcgccgcgtc
      541 ttcggcgctg atcctcacat cgtcggccgc gtcatccccc tcgagctgct cgaaggcggc
      601 cgcggcgccg acgaagccgg atacgaagtg attggtgtca tgccgccgga cttcacgtat
      661 ccggtcggcg cggcccgccc gaccgacgtc tggattccct acgtcgtccc cgaaaccgat
      721 cgcctgcgcg atccggcccg aatggcgacc tatctccagg tcatcgcgcg cctgaagcct
      781 gacgtgccgg tgatgcaggc ccaggcgcag atggatcaga ttgccgccgc gctcgagcgt
      841 gcgcatcccg tctggaacaa ggacagccgg attggcgttc gcccgctcgt cgatcacatc
      901 gtcggtgccc agatcacgtc gtggctgttg gtgctcctgg cagccgtggt gatggtgctg
      961 ctgatcgcgt gcgcgaacac cgccagcctg ctgctcgcgc gggccaccgt ccgcgagcgc
     1021 gatctcgccg tgcgggccgc tctcggggcc agctggtggc acctggtgcg tcagctcttg
     1081 atcgagaccc tcgtgctctc cgccgccggc gcggcattgg gtctcgtcct cgcgtggtgg
     1141 gccgtcggcg tgcttcgcgc ggcaatgccc gacggcgttc ctcgggtcac cacgatcgcg
     1201 ctcgacctca gggtgctggc gacagccgtg gcggtttcgg tcgccaccgc actgttgtgt
     1261 ggcattggtc cggcgctgca ggcggcacgg ccggatctgt cgcgcgccat gcgcgacacc
     1321 ggtcgttcgg gcaactcgcc gaggcgtcag cggctgcgcg atgcgctcgt cgttgcggag
     1381 gtgtcgctcg ccgtcgtgct gctcgtcgga gcggcgctgt tcatcggcag cttcgttgcg
     1441 ctcacacgga tcgaccccgg cttcgacgcg accaatgtgc tcacggcgca gattacgcca
     1501 cgcatcgcgt cgctgtcggc tccggctgac cgcacggccg cgctgtccga ggtcgtcgag
     1561 cgcatcggcg ccttgcctgg ggtcgagcat gccgcgctgc tcctggggca gctgccgctc
     1621 accgacggca tccggtcgac gagctttccg ttgcccgacg gaacaatcgc gcggttgagc
     1681 atcaagaacg tatcgccggg gtatcacgcc gcgcttcgga tcccgctccg tcgcggccgc
     1741 ttcttcacgg ccgcggatcg cgccggcgca ccggccgtga tcatcctgaa tgaggcggca
     1801 atcgctgcat acttcccccg ccaggatccg atcggccgga cgttcaacgg agcgacgatc
     1861 gttggcgtcg tcggcgatgc gcgccagaac ggcgtcgagc gcgacgtgat cccggaaata
     1921 tattccccgc tcgcgcaagg acaagcagca ggcgccgagt tgctcgttcg gacggctggc
     1981 gacccttacg actcgttgcg cgcgatacgt gcagccgtct tcgccgtcct tcccgacgtc
//
LOCUS       DASSYW010000801         2378 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_86667, whole genome shotgun sequence.
ACCESSION   DASSYW010000801 DASSYW010000000
VERSION     DASSYW010000801.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2378)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2378)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2378
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_86667"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..214)
                     /locus_tag="VFN38_12780"
     CDS             complement(<1..214)
                     /locus_tag="VFN38_12780"
                     /inference="COORDINATES: protein motif:HMM:NF015729.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CidA/LrgA family protein"
                     /protein_id="HET9012689.1"
                     /translation="MIRNGLTFLVGLALLVVLAQLGDWLVRVTGATVPGSVVGMLLLT
                     AMIETRLLPVHVVRSAAELLVRHLALL"
     gene            complement(211..606)
                     /locus_tag="VFN38_12785"
     CDS             complement(211..606)
                     /locus_tag="VFN38_12785"
                     /inference="COORDINATES: protein motif:HMM:NF015862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-binding protein"
                     /protein_id="HET9012690.1"
                     /translation="MRQKPALTAADAERIVTAARTFADARQWRVTIAVVDEGGYLLRL
                     ERMDGASLQSPQVATMKASTAALSRFPTKRMEDLARERPGMLRFPDRLPIQGGLPIMH
                     DGECVGGVGVSGVQSHEDEEIAAAGVAAL"
     gene            complement(612..>2378)
                     /locus_tag="VFN38_12790"
     CDS             complement(612..>2378)
                     /locus_tag="VFN38_12790"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone-dependent
                     dehydrogenase"
                     /protein_id="HET9012691.1"
                     /translation="TFHTGEVGPESRTRNRRSLEVTPIVVDGTMYVITPLARIIALDP
                     ATGRERWRYDAGLDRGLGFGDHTSRGVSTWLDPTRSGGAPCRRRILAATVDARLLALD
                     AASGRPCEDFGEHGVVDLRRGLRNAPFETAEYEETSPPLVVNDLIVVGSAVADNNRTD
                     AASGEVRAFDVRTGALRWTWDPVPQDSTDPAYATWRGERAHRTGAANAWSVLAADPAR
                     DLVFVPTGSASVDYFGGERLGQNRYANSIVALRASTGRIVWSFQTVHHDLWDYDNASP
                     PALTSVDYGGRRRDAVLQATKTGQLFVLDRETGAPIVPVQEMPVPRSTIPGEEAWPTQ
                     PQSAIGPLSPQRIAAADAFGANDADRALCRERIAALRNEGPFTPPSLEGSLVLPSNIG
                     GAHWGGVAPDPSAQIAVVPVNTVAAVVKLVPRAAFDSTRRSTPRRVGGEFASMRGTPY
                     AMYRELLLLPTLVPCTPPPFGMLVGVDLRRGTIAWRVPLGSSTAGAASSAGTPNLGGA
                     ITTAGGLTFIAATIDRTFRAFDTRTGRELWQTTLPAAGKATPMTYRANGRQFVVIAAG
                     GDGEAFGTGDAIMAYALPDSIP"
BASE COUNT          350 a          816 c          901 g          311 t
ORIGIN      
        1 acagaagcgc aaggtgccgc acgagcagct ccgccgccga tcgaacgacg tgcaccggga
       61 gcaggcgcgt ctcgatcatc gccgtgagga gcagcatgcc gacgacgctc ccgggcaccg
      121 tcgcgcccgt gacgcgcacc agccagtccc cgagctgggc gagcacgacg agaagcgcga
      181 gtccgaccag gaaggtgagg ccgttgcgga tcacaacgcg gccacaccgg ccgcggcgat
      241 ctcctcatcc tcgtgcgact ggacgcccga gacgcccacg ccgccgacgc actctccatc
      301 gtgcatgatc ggcaggccgc cctggatggg caggcggtcg gggaaccgca gcattccagg
      361 tcgctcgcgc gccagatcct ccattcgctt cgtcggaaag cgggagagcg cggcagtgga
      421 tgccttcatc gtggccacct gggggctctg caggctggcg ccatccatcc gctccaggcg
      481 cagcaggtag ccgccctcgt ccacgacggc gatggtcacg cgccactgac gggcgtcggc
      541 gaaggtgcgg gcggccgtca cgatgcgctc ggcgtcggcg gcggtgagcg cgggcttctg
      601 tcgcatgact gtcaggggat ggagtcggga agggcgtacg ccatgatcgc gtcgccggtg
      661 ccgaaggcct cgccgtcgcc gccggcggcg atgacgacga actgccggcc attcgcgcga
      721 taggtcatcg gagtggcctt gcccgctgcg ggcagcgtcg tctgccacag ctcgcggccc
      781 gtgcgggtgt cgaacgcgcg gaaggtgcga tcgatcgtcg cagcgatgaa cgtgagaccg
      841 cccgccgtgg tgatggcacc cccgagattg ggcgtgccgg cggaggatgc ggcgccggcg
      901 gtggatgagc cgagcgggac gcgccaggcg atggtgccgc ggcgcagatc gacgccgacg
      961 agcatcccga acggcggcgg cgtacacgga acgagcgtcg gcaggagcag cagctcgcga
     1021 tacatggcgt acggggtccc ccgcatcgac gcgaactcgc caccgaccct ccgcggcgtg
     1081 cttcgtcgcg tggaatcgaa cgcggcgcgg ggcacgagct tcacgacggc ggccacggtg
     1141 ttcacgggca cgacggcgat ctgcgccgac gggtcgggcg cgacgccgcc ccagtgcgcg
     1201 ccgccgatgt tggacggcag cacgagcgag ccctcgaggc tcggcggcgt gaagggtccc
     1261 tcgttgcgga gagcggcgat ccgttcgcgg cagagggcgc gatcggcgtc gttcgcgccg
     1321 aaggcgtcgg ccgccgcgat ccgctgcggc gagagcggac cgatcgcgct ctgtggctgc
     1381 gtgggccatg cctcctcgcc gggaatcgtg gagcgcggca cgggcatctc ctgcacgggc
     1441 acgatcggcg cacccgtctc gcggtcgagc acgaagagct ggcccgtctt ggtcgcctgg
     1501 agcacggcgt cgcgccgccg acccccgtag tccacgctcg tcagcgcggg cggcgacgcg
     1561 ttgtcgtagt cccacaggtc gtgatgcacc gtctggaagg accagacgat cctgcccgtg
     1621 gaggcgcgca gcgcgacgat ggagttcgcg tagcggttct gcccgagccg ctctccaccg
     1681 aagtagtcca cgctcgcgct tccggtgggg acgaacacga gatcgcgcgc cggatccgcc
     1741 gcgagcaccg accaggcatt ggccgcgccg gtgcgatgcg cacgctcgcc gcgccacgtc
     1801 gcgtacgcgg ggtcggtgga gtcctgcggc acgggatccc acgtccagcg gagcgcgccg
     1861 gtgcggacgt cgaaggcgcg gacctcgccg ctggcggcgt cggtgcggtt gttgtcggcg
     1921 accgcggacc cgacgacgat caggtcgttc acgacgagcg gcggggaggt ctcctcgtat
     1981 tccgccgtct cgaacggcgc gttgcgcagg ccacgccgca gatccacgac gccgtgctcg
     2041 ccgaagtcct cgcacggacg gcccgacgcg gcgtccaggg cgagcagtcg agcgtcgacg
     2101 gtggcggcga ggatgcgacg ccggcacggg gcgccgccgg agcgcgtggg gtcgagccag
     2161 gtggagacgc cgcggctggt gtgatccccg aagccgaggc cgcgatcgag cccggcgtcg
     2221 tacctccagc gctcgcgccc ggtggccgga tcgagcgcga tgatgcgcgc gagcggcgtg
     2281 atgacgtaca tcgtgccgtc caccacgatg ggcgtgacct cgagcgagcg gcggttgcgc
     2341 gtgcgcgact cggggccgac ctcaccggtg tgaaaggt
//
LOCUS       DASSYW010000802         4607 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1223178, whole genome shotgun sequence.
ACCESSION   DASSYW010000802 DASSYW010000000
VERSION     DASSYW010000802.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4607)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4607)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4607
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1223178"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1370
                     /locus_tag="VFN38_12795"
     CDS             <1..1370
                     /locus_tag="VFN38_12795"
                     /inference="COORDINATES: protein motif:HMM:NF013100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /protein_id="HET9012692.1"
                     /translation="ATLELTIDQNNQHIVERELKAGVDWANAAGGSAVVMDPATGEVL
                     AMASYPTFNPNVYRESKETERRNRPVQDLYEPGSTFKIITASAALEEHVVRPTDLVDV
                     STGSINFGSRVIRDDHHYGVLTFQQVVEKSSNVGSIKVGLRLGSERFGSYVKRFGFGR
                     MLSPDFRGENAGILWDWSTMTDSAFATTLIGYQVGVTPLQMVTAVSAVANGGELIQPR
                     IVRAVVKDGVRLPVPRKVLGRAISKDTAARLTPMLEGVVTDGTGKQAAVDDYTIAGKT
                     GTAKKVVNGSYKGHSNYNVSFVGFAPSRKPKFTIIVVVDSPHGVPAYGGTVAAPIFQR
                     ITDQALRYYGVQRTLNAPPPLIVERQQPNANAPMPASGPVEPPSVLNASATADPVVPD
                     LTGMSGRDAVRTLATLGLPVQVVGHGLVTDQRPLPGTPVVAVVSARVWLDRRTPEAVP
                     KAPGQ"
     gene            1367..2878
                     /locus_tag="VFN38_12800"
     CDS             1367..2878
                     /locus_tag="VFN38_12800"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: protein motif:HMM:NF001124.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HET9012693.1"
                     /translation="MTVRDVLRSVAVLVPAEARSALDAPGLDVPCTGVVYDSRSVKPG
                     SVFVALQGLRADGAAFAPQALAAGAAAIVAAAGVAPVAGAAWLPVADPRLALALLAAE
                     FHGHPSRSMRVVGVTGTNGKTTTAYLVRAILEAAGIKCGLMGTVAYCIGDREVEASRT
                     TPEAPDVQGFLREMLDEACGACVMEVSSHALALRRVDGMHFAAGVFTNLTRDHLDFHG
                     SMESYFVAKRRLFEMLPSTAPAVVNLDDPRGVALVDAGGSPVTYAIGKAADVTPGPLS
                     YSLHGLEFDVRTPQGEVHVKSSLVGKPNVYNILAAVGVTAAMGIPLDAIEKGLARLKG
                     VPGRFEVVSRPKDDITVVVDYAHTDDALRNLLETARPIATRRLITVFGAGGDRDRTKR
                     PLMGMVAARLSDVVFITSDNPRGEDPAQIIEEVMRGAEPEARQRNAKAVTVIDRGEAI
                     RRAVAEAAAGDVILIAGKGHEKYQVIGGTTFPFDDVAVARDALGTRRQTSGVG"
     gene            2875..4275
                     /gene="murF"
                     /locus_tag="VFN38_12805"
     CDS             2875..4275
                     /gene="murF"
                     /locus_tag="VFN38_12805"
                     /EC_number="6.3.2.10"
                     /inference="COORDINATES: protein motif:HMM:TIGR01143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0047480 -
                     UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HET9012694.1"
                     /translation="MSAVPLTLGWIAGAVAGTLKGRGDTPVRDVVTDSRSMAAGDVFV
                     ALRGPRFDGHSFAAEALARGAAGVVVEQEWAGAHPDAGDGVVGVADTLQALQDLAHAV
                     RDASGAKVVAITGSAGKTTTKESIAALLATRFRVVKNKGNLNNHIGLPLSLMQLTNGP
                     DVAVMELGMNHAGEIRTLVRIAEPDIRVWTNVGDAHLGFFASVDAIADAKAEILEEAR
                     PGDVLVCAADDARVMARATAFHGRRVTFGESAGADVRAHEVRDLGWDGMGARVDTPAG
                     AMDLSTPLLGRGNLANVLAATAVALECGVPLDVIRDTAATLRPADRRGVVHHLRDGVT
                     LIDDSYNASPSALRRALDVMARETRASGRVAVLGEMLELGDHAIGLHETCGRAAAEAG
                     LRLLVAVGGAPAKALAEAAVEAGMPRAAVTYFASSTDAAGAVAQALAPGDLVLVKGSR
                     GTRCDVVTDRIVQERG"
     gene            4275..>4607
                     /locus_tag="VFN38_12810"
     CDS             4275..>4607
                     /locus_tag="VFN38_12810"
                     /inference="COORDINATES: protein motif:HMM:NF022030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HET9012695.1"
                     /translation="MLYYLLPPLASISSLGFLNVTRYITFRTAAASLTALAISLVLGP
                     WLIRKLRDFQIGQVIRQEGPQSHRAKAGTPTMGGLLILAAALVPTLLWADLSNPFIWI
                     AMGATLGCG"
BASE COUNT          658 a         1562 c         1724 g          663 t
ORIGIN      
        1 gcgccacgct cgagctcacg atcgatcaga acaaccagca catcgtcgag cgcgagctga
       61 aagccggcgt ggactgggcg aacgccgccg gcggctcggc cgtcgtgatg gatcccgcca
      121 ccggcgaggt gctcgcgatg gcgagctacc cgacgttcaa cccgaacgtc tatcgcgagt
      181 cgaaggagac cgagcggcgc aaccggccgg tgcaggatct ctacgagccc ggatccacgt
      241 tcaagatcat cacggcgagc gccgcgctcg aggagcacgt cgtgcgcccg acggatctcg
      301 tggacgtgag caccgggtcg atcaacttcg gctcgcgcgt catccgcgac gatcaccact
      361 acggcgtgct cacgttccag caggtggtgg agaagtcgag caacgtcggc tcgatcaagg
      421 tggggctgcg gctcggctcg gagcgcttcg gcagctacgt gaagcggttc ggattcggcc
      481 gcatgctgtc gcccgacttc cgcggcgaga acgccggcat cctgtgggac tggtccacga
      541 tgaccgacag cgcgttcgcg acgacactga tcggttatca ggttggcgtc accccgctgc
      601 agatggtcac ggccgtgagc gccgtcgcca acggcggcga gctgatccag ccgcgcatcg
      661 tccgcgccgt ggtgaaggac ggagtgcgtc tgcccgtgcc gcgcaaggtg ctgggccgcg
      721 cgatcagcaa ggacacggcg gcgcgcctga cgccgatgct cgagggcgtc gtgacggacg
      781 gcaccggcaa gcaggccgcg gtcgacgact acacgatcgc gggcaagacc ggaacggcga
      841 agaaggtcgt caacggcagc tacaaggggc actcgaacta caacgtgtcg ttcgtcggct
      901 tcgcgccgtc gcgcaagccg aagttcacga tcatcgtcgt cgtcgattca ccgcacgggg
      961 tgccggcgta tggcggcacc gtggcggcgc ccatcttcca gcgcatcacg gatcaggcgc
     1021 tgcgctacta cggtgtgcag cggacgctca acgcgccgcc gccgctcatc gtcgagcgcc
     1081 agcagcccaa cgccaatgcg ccgatgccgg cgtcgggacc ggtcgagccg ccgagcgtgc
     1141 tcaacgcgag tgccaccgcg gatcccgtcg tgccggacct gaccggcatg agcgggcgcg
     1201 acgcggtgcg cacgctcgcg acactcggcc tcccggtgca ggtcgtcggg cacggcctcg
     1261 tgaccgatca gcgtccgttg cccgggacgc cggtggtggc tgtcgtgtcg gcgcgggtgt
     1321 ggctcgatcg ccgcaccccg gaggctgtgc ccaaagcgcc cggtcaatga cggttcgcga
     1381 cgtcctccga tcggttgccg tgctcgtgcc ggccgaggcg cgatcggcgc tcgacgcgcc
     1441 gggcctcgac gtgccgtgca ccggcgtcgt gtacgactcc cgctcggtca agcccgggtc
     1501 cgtcttcgtc gcgctgcagg ggctgcgcgc tgatggcgcc gcgttcgcac cgcaggccct
     1561 ggcggccggc gcggcggcga tcgtggccgc cgcgggcgtg gcgccggtgg ccggcgccgc
     1621 ctggctgccg gtcgccgatc cgcggctggc gctcgcgctc ctcgccgccg agttccacgg
     1681 acacccgagc cgctcgatgc gcgtggtcgg cgtcaccggc acgaacggca agacgaccac
     1741 tgcgtatctg gtgcgcgcca tcctcgaggc cgccggcatc aagtgcgggc tgatgggcac
     1801 ggtggcctac tgcatcggcg atcgcgaagt ggaggcgtcg cgcaccacgc ccgaggcgcc
     1861 ggacgtgcag ggctttctgc gcgagatgct cgacgaagcg tgcggcgcgt gcgtgatgga
     1921 ggtgtcgtcg cacgcgctgg cgctgcggcg cgtggacggg atgcacttcg ccgccggtgt
     1981 gttcacgaac ctcacccgcg atcacctcga cttccacggc agcatggaga gctatttcgt
     2041 ggcgaagcgc cggctcttcg agatgctgcc ctccaccgcg ccagccgtgg tgaatctcga
     2101 cgatccgcgc ggcgtggcgc tggtggacgc cggcggctcg ccggtcacct acgccatcgg
     2161 caaggccgcc gacgtgacgc cggggccgct gtcgtactcg ctgcacggcc tcgagttcga
     2221 cgtccgcacg ccgcagggcg aggtgcacgt gaagtcgtcg ctggtcggca agccgaacgt
     2281 ctacaacatc ctcgcggccg tgggcgtgac cgccgcgatg ggcattccgc tcgacgcgat
     2341 cgagaaaggt ctcgcgcggc tgaagggcgt gcccggacgg ttcgaagtgg tgtcgcgacc
     2401 gaaggacgac atcaccgtgg tcgtggacta cgcgcacacc gacgacgcgc tgcgcaacct
     2461 gctcgagacc gcgcggccga tcgcgacgcg ccggttgatt acggtgttcg gcgccggcgg
     2521 cgaccgcgat cgcacgaagc ggccgctcat gggcatggtg gcggcgcggc tgagcgacgt
     2581 ggtgttcatc acgtctgaca acccgcgtgg cgaagacccg gcgcagatca tcgaggaagt
     2641 gatgcgcggc gccgagccgg aagcgcgtca gcgtaacgcg aaggccgtga ccgtcatcga
     2701 tcgcggcgag gcgatccggc gggccgtggc cgaggccgcc gcgggcgacg tgattctcat
     2761 cgcgggcaag gggcacgaga agtaccaggt gattggcggc accaccttcc ccttcgacga
     2821 cgtggccgtg gcacgcgacg cgctcggcac gcggcgccag acgtcggggg tcgggtgagt
     2881 gcggttccgc tgacgctcgg ctggattgcc ggcgcggtgg ccggcacgtt gaagggacgg
     2941 ggtgacacgc cggtgcgcga cgtcgtgacc gacagccggt cgatggcggc cggcgacgtg
     3001 ttcgtggcgc tgcgcgggcc gcgcttcgac ggccactcgt tcgcggccga ggcgctggcg
     3061 cgcggcgcgg cgggcgtggt ggtggaacag gagtgggccg gcgcgcaccc ggacgccggc
     3121 gacggtgtgg tgggcgtggc cgacacgctg caggcgctgc aggacctggc gcatgcggtg
     3181 cgggacgcgt cgggcgcgaa ggtggtggcg attaccggga gcgcggggaa gacgacgacg
     3241 aaggaatcga ttgcggcgct gctcgccacg cgattccgcg tggtgaagaa caaggggaac
     3301 ttgaacaacc acatcggcct gccgctgtcg ctgatgcagc tgacgaacgg gccggacgtg
     3361 gccgtgatgg aactggggat gaatcacgcc ggagagatcc gcacgctcgt gcgcatagcc
     3421 gagcccgaca tccgtgtgtg gacgaacgtg ggcgatgccc acctgggctt ctttgcgtcc
     3481 gtggacgcga ttgccgacgc caaggccgag atcctggagg aggcgcgccc gggcgacgtg
     3541 ctcgtgtgcg ccgccgacga cgcgcgcgtg atggcgcgcg ccacggcgtt tcacggccgc
     3601 cgcgtcacct tcggcgagtc cgccggcgcc gacgtgcggg cgcacgaggt gcgcgacctc
     3661 ggctgggacg ggatgggggc gcgcgtagac acgccggccg gcgcgatgga tctctccacg
     3721 ccgctgctcg gccgcggcaa ccttgccaac gtgctggccg cgaccgcggt ggcgctcgag
     3781 tgcggcgtgc cgctcgatgt gatccgcgac accgccgcca cgctgcggcc ggccgatcgg
     3841 cgcggcgtcg tgcatcactt gcgcgacggc gtgacgctca tcgacgactc ctacaacgcg
     3901 agcccctcgg cgctgcggcg cgcgctcgac gtgatggcgc gcgaaacgcg ggcctccggc
     3961 cgcgtggcgg tgctgggcga gatgctcgag ctgggcgatc acgcgatcgg gctgcacgaa
     4021 acgtgcgggc gcgcggccgc ggaggcaggg ctgcggctgc tggtcgccgt cggcggcgcg
     4081 ccggccaagg cgctggccga ggccgccgtc gaagccggga tgccgcgcgc ggccgtcacg
     4141 tacttcgcgt cgagcaccga cgcggccggc gccgtggcgc aggcgctggc gcccggtgat
     4201 ctcgtgctcg tgaagggctc gcgcggcacg cgctgcgacg tggtgaccga ccggatcgtg
     4261 caggagcgcg gctgatgctc tattacctgc tgccgccgct cgcgtcgatc tcctccctgg
     4321 ggttcctgaa cgtcacgcgc tacatcacgt tcaggacggc ggccgccagc ctcacggcgc
     4381 tcgcgatcag cctcgtgctc gggccgtggc tcattcgcaa gctgcgcgac ttccagatcg
     4441 ggcaggtgat ccgccaggag ggcccccagt cgcatcgcgc caaggccggc acgcccacga
     4501 tgggcggact gctgatcctc gcggcggcgc tggtgcccac gctgctctgg gcggatctct
     4561 cgaacccgtt catctggatt gcgatgggcg ccacgctggg gtgcggc
//
LOCUS       DASSYW010000803         2167 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_438884, whole genome shotgun sequence.
ACCESSION   DASSYW010000803 DASSYW010000000
VERSION     DASSYW010000803.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2167)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2167)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2167
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_438884"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..428)
                     /locus_tag="VFN38_12815"
     CDS             complement(<1..428)
                     /locus_tag="VFN38_12815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012696.1"
                     /translation="MSAAGGGGWVRAALLAGVVYFLIGRVFALPVSHVQAWRLAAWLL
                     SGCVYAAHIGYERFGLRTPNRPAALHVAAGVAFGAFALAVAGMIHSLSTTSAIRPVWL
                     LAIVLWPAFTALPAFVGAFVAGARLRRVKSRQAGEPGSAG"
     gene            599..1339
                     /locus_tag="VFN38_12820"
     CDS             599..1339
                     /locus_tag="VFN38_12820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012697.1"
                     /translation="MRIRAVVAILLLLPAPLSAQRFPVPRTGRDPARPVPLPRQPEPI
                     ARELAYRRLRLSVESYPLISYVQSPGLAADGRTSAWTTFGAGTRAEYRLTRHASATLD
                     LTSSLVGSPLIVQTAELGTRLRPERTERRVYPFADLRVGFVSAYDRSLGPILYDAAGF
                     PTPQSAYGIRYSNGFGGVAGAGMEYALTRTFSLTTGASVMVSRLTSHDFRGSQTVDPG
                     FAMTSYRLTIGVRYNPVRLVMPSGGDRR"
     gene            complement(1385..2101)
                     /locus_tag="VFN38_12825"
     CDS             complement(1385..2101)
                     /locus_tag="VFN38_12825"
                     /inference="COORDINATES: protein motif:HMM:NF020296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA alkylation repair protein"
                     /protein_id="HET9012698.1"
                     /translation="MATPARHKAFVAALQEIADPADVGEVSRFFRVDPHAPSSDNRFL
                     GVRMGEVFPVAKRFAADMPLAGIERLLDEPHYEVRMGAVSIMDFQARAKRSSGEQRKA
                     LFDLYIRRHDRINNWDLVDRAAPYVVGGYLADKPRTVLDRLARSANPWERRTAIVSTY
                     YFIRAGDLDDTFRIAELLVRDDHELVQTAVGSWIREAGKRDQPRLVRFLEKHARAMPR
                     KMLRYAAEKLPPALRAKFVG"
BASE COUNT          319 a          767 c          766 g          315 t
ORIGIN      
        1 caaccggcac tacccggttc acccgcctgg cgggacttaa cccgccgcag ccgcgccccc
       61 gccacgaacg caccgacgaa cgccgggagc gcggtgaagg cgggccagag tacgatggcg
      121 agcagccaca ccgggcgaat cgccgacgtg gtggacagcg agtggatcat cccggcgacg
      181 gcgagggcga atgccccgaa cgcgaccccc gccgccacgt gcagcgcggc tggacgattc
      241 ggggtgcgca ggccgaatcg ctcgtatccg atgtgcgccg cgtacacgca gccgctcagc
      301 agccacgccg ccagccgcca tgcctgcacg tggctcaccg gcagggcgaa caccctgccg
      361 atgaggaagt agacgacgcc ggccagcaat gccgcgcgaa cccagcctcc tccacccgcc
      421 gcgctcatgt cgcccgtggg ccgcaatgat ccgaccggcc ggtcatgccg gcggacctgc
      481 ccggaccgcg gccgagtccg gctgtgcgac gtccgttctt gcgctggcgg gcggtcggct
      541 cgacactatt gtggtaagtc gtgcattcga gagcgtggga cgttgccagg aggccgtcat
      601 gcgtattcgt gccgtcgtcg cgattctcct gctgctgcca gctccactga gcgcgcagcg
      661 cttcccggtg ccgcgcacgg gacgggatcc cgcgcggccg gttcccctgc cccggcagcc
      721 ggagccgatc gcgagggagc tcgcataccg gagactgcgc ctctcggtag agagctaccc
      781 gctgatcagc tacgtccagt cgcccggcct ggcggcggac ggacgaacct cggcctggac
      841 gacgttcggt gcgggcactc gcgccgagta tcgtctcacc cgccatgcgt cggcgacgct
      901 ggacctgacg tcgtcgctgg tggggagccc gttgatcgtg cagaccgcgg agctgggcac
      961 ccggctccgt cccgagcgca ccgagcgccg ggtgtatccg ttcgccgacc tccgcgtcgg
     1021 cttcgtgtcc gcgtacgaca ggagcctcgg ccccatcctg tacgacgcag ccggattccc
     1081 gacgccgcag agcgcgtacg gcatccgcta cagcaacggc ttcggagggg tcgccggcgc
     1141 ggggatggag tacgcgctca cgcggacctt ctccctcacg acgggcgcct ccgtgatggt
     1201 gagccgcctg acgtcgcacg acttccgggg cagccagacc gtcgatcccg gcttcgcgat
     1261 gacgtcgtac cggctcacga tcggggtgcg gtacaacccc gtgcggctgg tcatgccgtc
     1321 gggaggcgac cggcgctgag ggaggcagat cggcggctgg gggaatcgtc atgcggcgag
     1381 gccctcagcc gacgaacttc gcgcggagcg ccggcggcag cttctccgcg gcgtaccgca
     1441 gcatcttgcg cggcatcgcg cgcgcgtgct tctcgaggaa acgcacgaga cgcggctggt
     1501 ctcgcttgcc cgcttcgcgg atccacgagc cgaccgccgt ctggaccagc tcgtggtcgt
     1561 cgcgcaccag cagctcggcg atgcgaaagg tgtcgtccag atcgccggcc cggatgaagt
     1621 agtaggtgct cacgatcgcg gttcggcgct cccaggggtt cgcggagcgg gcgagccggt
     1681 cgaggaccgt tcgaggcttg tcggcgaggt atcccccgac gacgtagggc gcggcacggt
     1741 cgaccaggtc ccagttgttg atgcggtcgt ggcgccggat gtacaggtcg aagagcgcct
     1801 tgcgctgctc gcccgagctg cgcttcgcgc gcgcctggaa gtccatgatg ctgaccgcgc
     1861 ccatgcgaac ttcgtagtgc ggttcatcga gcagccgctc gatgccggcg agcggcatgt
     1921 cggcggcgaa gcgcttcgcc acgggaaaca cctcgcccat ccgcacgccg aggaagcggt
     1981 tgtcgctcga cggagcgtgc gggtcgacgc ggaagaagcg cgacacctcg ccgacgtccg
     2041 cggggtcggc gatctcctgg agcgccgcga cgaacgcctt gtgccgagcc ggtgtcgcca
     2101 tcctctcccc ctggggtcag ctgcccgcgc cacgacgacg cgtgatcagg cggggggtac
     2161 gggcccg
//
LOCUS       DASSYW010000804         2746 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1112583, whole genome shotgun sequence.
ACCESSION   DASSYW010000804 DASSYW010000000
VERSION     DASSYW010000804.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2746)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2746)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2746
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1112583"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..767)
                     /locus_tag="VFN38_12830"
     CDS             complement(<1..767)
                     /locus_tag="VFN38_12830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012699.1"
                     /translation="MALVNDEDPGQVGALGQPPLGDYLGIPFNDAGRLRSDTSAESIW
                     GTPEYQCRPHSAPHQWRGLGGARILKEQDPLTREVRAYHIQFMRSLDRPVFMDGRPHP
                     PAWAPHTWTGFSTGQWVGNTLKITTTHLKDGYLKRGGPQTSDLYTMTEYLTRHDEILT
                     ITTVVDDPVYLDEPYVQSTTYVYDPSGSVAMETCNASAFAENGGTDRHHVPHFLPGQN
                     TAWKEWLKNEPWVPEAAARGGVKTLYPEYRGAGDAAA"
     gene            complement(1071..2042)
                     /locus_tag="VFN38_12835"
     CDS             complement(1071..2042)
                     /locus_tag="VFN38_12835"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HET9012700.1"
                     /translation="MTTRIVAATVLLLWPALVRAQGAPVVDHHQHLFSPALAAAMSPP
                     APAPPTPPSTAADLVALLDAAGIKRAVVLSTGYIFEQPSRKIENAADKLRADHDWTSQ
                     QVAQYPGRLLGFCGLNPLKDYALDELARCAKDPNLRNGLKLHFGNSVVDYHNAQHIEQ
                     VKRVFRAANGYRMPIVVHMRASLTAKLPYGRDEALIFLNELVPAAPDVVIQVAHLAAA
                     GAPSDPGADQAIEAFIEAIANGDARATRLYFDAPSVVPTATLTAEAAAALASRIRRLG
                     VQRVLFGSDAPTGGALTPRTAWESFRKLPLTEAEFQTIAANVAPYLR"
     gene            2169..2567
                     /locus_tag="VFN38_12840"
     CDS             2169..2567
                     /locus_tag="VFN38_12840"
                     /inference="COORDINATES: protein motif:HMM:NF039360.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HET9012701.1"
                     /translation="MRKLALWGAVGLLALGGAAPLRAHHSFAMFDTTKPVTLTGKVTK
                     FQWTNPHAYIELDVPDGTNPPKHWTVELGSTSILMQGGWKFTDVKPDQTITVVLSPLR
                     DGQPGGLLVRITLADGRVLSNGPGPAGGAR"
     gene            2564..>2746
                     /locus_tag="VFN38_12845"
     CDS             2564..>2746
                     /locus_tag="VFN38_12845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012702.1"
                     /translation="MTRRVTLAAVALVATVVTTGLGAQRAAAPPDLSGVWAPYRGGRG
                     ADPKFAAPPGTEILLKG"
BASE COUNT          404 a          892 c          982 g          468 t
ORIGIN      
        1 aacgcggccg cgtcgccagc gccgcgatat tcgggataga gcgtcttcac gccgccgcgc
       61 gcggccgcct cgggcaccca cggttcgttc ttcaaccact ccttccaggc cgtgttctgc
      121 cccggcagga aatgcggcac gtggtgccgg tcggtaccgc cgttctcggc gaatgccgac
      181 gcgttgcagg tctccatagc tacgctgccg ctcgggtcgt acacgtaggt cgtggattgg
      241 acgtatggct cgtcgagata caccggatcg tccaccaccg tcgtgatggt gaggatctcg
      301 tcgtggcggg tgaggtactc cgtcatcgtg tagagatcgc tcgtctgcgg cccgccgcgt
      361 ttcaggtagc cgtccttgag atgcgtcgtc gtgatcttga gcgtgttgcc gacccactgg
      421 ccggtggaaa acccggtcca cgtgtgcggc gcccacgcgg gcgggtgcgg ccggccgtcc
      481 atgaagacgg ggcggtcgag ggagcgcatg aactggatgt ggtacgcgcg cacttcgcgc
      541 gtgagcgggt cctgctcctt gaggatgcgc gcgccgccga ggccgcgcca ctggtgcggc
      601 gccgagtgcg gccggcactg atactcagga gtgccccaga tcgactcggc cgacgtgtcg
      661 gagcgcaagc ggccggcgtc gttgaagggg atgccgagat agtcgccgag cggcggctgg
      721 ccgagcgcgc cgacctgacc cggatcctcg tcgttcacca gcgccaactc tccggcgata
      781 tcgggcggcg tgggtgtgcg cggcggctgc gccaagacgg ttccggctcc gagcgcccag
      841 gtcacccagg cggcgatcaa gactcccgat cgatacgacc ccgacatatg tggcggtgat
      901 gatacccgcg tgatggcgca ctcgactact gaacctggaa aaggtgcgcc acacgcgggt
      961 atctcgtttt cttttgcccc gcttcgcggg gcggccggct tgtcggattg gcaatcgact
     1021 catctgtggc ggatccggcc gccaagccgg gaggcggttc ccgccgtcgt ctatcgcagg
     1081 tagggggcga cgttggccgc gatggtctgg aattccgcct cggtcagcgg cagtttccgg
     1141 aaggattccc acgccgttcg cggcgtgagg gcgccgcccg tgggggcgtc cgatccgaag
     1201 agcacccgct gcacgccgag acggcgaatc cgcgaggcca gtgccgccgc ggcctcggcg
     1261 gtcagcgtgg cggtcgggac cacgctcggt gcgtcgaagt agagtcgcgt ggcgcgcgcg
     1321 tcgccgttgg caatggcctc gatgaaggcc tcgatcgcct ggtcggcgcc ggggtccgac
     1381 ggcgctccgg cggccgcgag atgggcaacc tggatgacga cgtcgggcgc ggccggcacg
     1441 agctcgttca ggaagatcag cgcctcatcc cgtccgtacg gcagcttcgc ggtgagcgag
     1501 gcccgcatgt gcacgacgat cggcatgcgg tagccgttcg ccgcccggaa cacgcgcttc
     1561 acctgctcga tgtgctgggc gttgtggtag tccaccaccg agttgccgaa atgcagcttg
     1621 agaccgttgc ggagattggg atctttcgcg cagcgcgcga gctcgtccag cgcgtagtcc
     1681 ttgagcgggt tgagaccgca gaaaccgagc aggcggcctg ggtactgcgc cacctgctga
     1741 ctggtccaat cgtgatccgc ccgtaatttg tcggcggcgt tttcaatctt ccgggacggc
     1801 tgctcgaaga tgtaacccgt ggacagcacc accgcgcgct tgatgccggc cgcgtcgagc
     1861 agtgcaacca gatccgccgc ggtcgatggt ggtgtcggcg gggcgggcgc gggcggcgac
     1921 atcgcggcgg ccagcgccgg gctgaacagg tgctgatgat ggtccacgac cggcgcgcct
     1981 tgcgcgcgca caagggccgg ccagaggagc aggaccgttg ccgcgacgat gcgcgtcgtc
     2041 atgacgaccg attagacgtc ggggcacgcc tccggttccg gcggcctcct ggcttggggc
     2101 gtggcgacgg atcttttcgt gaagtttgat tttcgcatcg cgcaaccccc gtggtacagt
     2161 ccgcatccat gcgaaagctg gctctctggg gcgccgtagg actgctcgcg ctcggcggcg
     2221 cggcaccgtt gcgcgcccac cattcgtttg cgatgttcga caccaccaaa ccggtgacgc
     2281 tcaccggcaa ggtgacgaag ttccagtgga cgaacccgca cgcgtatatc gagctcgacg
     2341 tcccggacgg caccaatccg ccgaagcact ggacggtgga actcggcagc acgagcatcc
     2401 tgatgcaggg tggttggaag ttcaccgacg tgaagccgga tcagacgatc actgtcgtcc
     2461 tcagcccgct gcgcgacggt cagccaggcg gcctgctggt gcggatcacg ctcgccgacg
     2521 gacgcgtgct gtcgaacggt ccggggccgg ccggaggggc gcggtgacac gtcgcgtcac
     2581 gctggccgcc gtcgcgctcg ttgcgacggt ggtgaccacg ggactgggcg cgcagcgcgc
     2641 cgccgccccg cccgatctgt cgggtgtgtg ggcgccgtat cgcggcggcc gtggtgccga
     2701 tcccaagttc gcggctcctc ccggcaccga gattctgctg aagggc
//
LOCUS       DASSYW010000805         2008 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1057495, whole genome shotgun sequence.
ACCESSION   DASSYW010000805 DASSYW010000000
VERSION     DASSYW010000805.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2008)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2008)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2008
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1057495"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..296
                     /locus_tag="VFN38_12850"
     CDS             <1..296
                     /locus_tag="VFN38_12850"
                     /inference="COORDINATES: protein motif:HMM:NF024754.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HET9012703.1"
                     /translation="ASRALDDDDETEEERRLMYVALTRARDHLAIVYPLNSYGSRRGA
                     DYSIDQLSRFLDREVRGKLQRVTLADAAPPAPPPPPMAPALDLRALLRGRFGA"
     gene            complement(856..>2008)
                     /locus_tag="VFN38_12855"
     CDS             complement(856..>2008)
                     /locus_tag="VFN38_12855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HET9012704.1"
                     /translation="PERLASVLVPVNHDIGAPRDGGTTAAAMSGAGATQPGSGGMGGG
                     GRVAQVPLGQLATVRQVAGPMVVRSEGAVPTAWVYIDVAGRDIGSYVRDAQRMVGDMV
                     QLPAGYSIVWSGQYEYMQRAQEKMQLVIPATLAIIFLLLYFNFKSVGETLIVMLSLPF
                     ALVGGIWLLWALGYDWSVPVAIGFIALSGVAAETGVIMLIYLDHAWDAQRARTGHATM
                     RDLYDAVVEGAVERVRPKMMTVTAIMAGLLPIFWGNGTGVRRLRPGANRGARIACSHA
                     TRSRKPTRIEPCGQRSGVDSGSQSTTSITCVSAALSPRRRPSSAASTTTGSMSHPTRG
                     TTFRSMRTRARSADWPRVHGALDGRCTTISRMRRLPMLAPPGLPSFANP"
BASE COUNT          283 a          755 c          672 g          298 t
ORIGIN      
        1 ccgcgtcgcg agcgctcgac gacgacgacg agaccgagga ggagcgacgg ctgatgtacg
       61 tcgccctcac ccgcgctcgc gaccacctcg cgatcgtcta tccgctcaac agctacggct
      121 cgcggcgcgg cgccgactac tcgatcgacc agctctcgcg cttcctcgat cgcgaggtgc
      181 gcgggaagct tcagcgggtg acgctcgccg acgccgcgcc ccccgcccct ccgccgccgc
      241 cgatggcgcc ggcgctcgac ctccgcgcgc tgctcagggg acgcttcggg gcctgagccg
      301 gcgccgctgg accgcggcgc cggcgagtgg tatcgtggcg gcgtcgaacc gccggcgcgg
      361 ggcgacgagc ccgactcgac ggactttcag ccccctccac ccccccgatc ccggcatggc
      421 gaacttctgc cactcgtgcg ccgctcccgt gacgccggac atgaaggcct gtccgcagtg
      481 tggaacctgg ctgcgcgccc cgtcgccaca acccgcggcg ccccccgcga gcgcgggcgt
      541 ctcgtcgcgt ctccatgccg ccgccgatcc gcgccagcgc ctcgcccccg ccggctacga
      601 acgggggctg accaccagag cgctcggcga cgactggccg gccgaaacgg agaccgcgac
      661 cgtcggcgcg cccgtcgctt attccgccgc gccgaggggg cggcgcttcg tggcgatgct
      721 gatcgacagt gtctatccgc tgatgttcat gctacccgga gtgctcctca tggcgctcgg
      781 tgccgccgcg gactcgggga ccctgagcgg gctcggtggg atgctcctcg ccgtcgccgt
      841 agcctacgcg ctctactacg ggttcgcgaa ggacggcagg ccgggcgggg cgagcatcgg
      901 caagcgtctc atgcggctga tggtcgtgca ccttccatcc aacgcgccgt gcacgcgcgg
      961 ccagtcggcg cttcgcgccc tcgtcctcat gcttctgaac gtcgtgcccc tcgtcgggtg
     1021 gctcatcgag cctgtcgtcg tgctcgccgc ggaggacggc cggcgcctgg gtgacagggc
     1081 cgccgagacg caggtgatcg acgtggtgga ctgggagccg gagtccaccc cgctcctctg
     1141 accgcacggc tcgatacgag tgggtttcct cgatcgggtc gcgtgcgagc atgcgatacg
     1201 agcacctcga ttggctcccg gtctcagtcg ccgtacgccg gtgccgttcc cccagaagat
     1261 cggcagcagc ccggccatga tggcggtcac ggtcatcatc ttcggccgaa cccgctcgac
     1321 cgccccttcc acgacggcgt cgtacaggtc gcgcatggtc gcgtgaccag tgcgcgcgcg
     1381 ctgggcgtcc catgcatgat ccaggtagat gagcatgatc acccccgtct cggccgcgac
     1441 gccagacagc gcgatgaagc cgatcgccac cggcaccgac cagtcgtagc cgagcgccca
     1501 gaggagccag atcccgccga cgagggcgaa ggggagggag agcatgacga tcagcgtctc
     1561 gcccacactc ttgaaattga agtaaaggag gaggaagatg atcgccagcg tggccgggat
     1621 gacgagctgc atcttctcct gcgcgcgctg catgtactcg tactggccgc tccatacgat
     1681 gctgtagccg gccggcagtt gcaccatgtc gccgaccatg cgttgcgcgt cgcggacgta
     1741 gctcccgatg tcgcgcccag cgacgtcgat gtagacccac gccgtgggca ccgccccctc
     1801 cgaccgcacg accatcggac ccgccacctg cctgacggtg gcgagctggc caagcggtac
     1861 ctgcgcgact cggccgcctc cgcccatccc gcccgaccct ggctgggtcg ctcccgcgcc
     1921 gctcatcgcg gcggccgtcg tcccgccgtc ccggggcgca ccgatgtcgt gattgaccgg
     1981 cacgagcacg gaggcgaggc gctcgggc
//
LOCUS       DASSYW010000806         2784 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1306803, whole genome shotgun sequence.
ACCESSION   DASSYW010000806 DASSYW010000000
VERSION     DASSYW010000806.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2784)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2784)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2784
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1306803"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..207
                     /locus_tag="VFN38_12860"
     CDS             <1..207
                     /locus_tag="VFN38_12860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012705.1"
                     /translation="LPDEVAAGAVPFALDVVVNETAPGRERRRGQLVLSGGAGDFVYL
                     RGDRHSMDRALDFLVEADSHRSND"
     gene            200..1120
                     /locus_tag="VFN38_12865"
     CDS             200..1120
                     /locus_tag="VFN38_12865"
                     /inference="COORDINATES: protein motif:HMM:NF012797.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TrmH family RNA methyltransferase"
                     /protein_id="HET9012706.1"
                     /translation="MTESNGSRDDVRQAEPPSEADAPGSPLLDAATVVLYEPQDPINI
                     GATVRAMKNMGVSDLRLIRPVPYDLNRIEQIAHDTADVYRRIRHFETTEEALADCVRV
                     AAFVGKPRAAKWARYDPRGVAEHFASYAPEGRVAYLFGREDHGLPRSALDHAHVTVTI
                     PTTAHASLNLAQAVLVALYELHLQAGSATRRLPRPRKHAPPPSSEQYERTFVDVERAL
                     AALDFFKTRNPELVMRSLRSIFYRAEPDGREVDLARAVAIEVLRTVDRVDRRAYERGL
                     ADAAGHAAVPARADEPPAAEGSRAPRPPRR"
     gene            1142..2497
                     /locus_tag="VFN38_12870"
     CDS             1142..2497
                     /locus_tag="VFN38_12870"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HET9012707.1"
                     /translation="MAFFRSRKPTAPTSPEPAAQDDTPEADEATDRLADEEVEGEGEV
                     GFTEEDAAREWRDRAEAVLPGGSSTGSKRAAALFGPDDLDSAAHFLRATGCEIQTVGG
                     ERLVDCTMALGAVALGYADPAVTQNVVQAASAGNVAGMSSVLEVQLAERLCDVIPCAE
                     QVRFLKTGAEGCAAAIRIARTATGRSRVVGAGYFGWLDWWTTDAAGVPTGAHGDFSPV
                     PFDDLLALERAASAAGGDLAAVILEPFVERPPSEGWLAGARAICERTGAVLIFDEMKT
                     GFRVRTGGWQEYAAVEPDLAVFGKALANGYPLAAVVGRAAIMEAAGRTWISSTLAGET
                     TALAAAMAVLDRHDEEDVCAALWSIGESTLDVVRAAVSASGVRGVSVEGIAPMWMFRF
                     DDPTRQDRFLRLARNHGALFKRGAYNYAALAHDEEAIAAIERAASSAFVELVEQERDG
                     R"
     gene            2494..>2784
                     /locus_tag="VFN38_12875"
     CDS             2494..>2784
                     /locus_tag="VFN38_12875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012708.1"
                     /translation="MSEPLIDVHAHFAHAGCGRADWRELNAARMRAGRRIGITCHVAS
                     ILGSWGHSSPTYFASPADVARGNDAQYEITGAEPHRVRAYVHVNPNHPDHALA"
BASE COUNT          381 a         1035 c         1010 g          358 t
ORIGIN      
        1 ctgccggacg aggtggccgc gggcgcggtg ccgttcgcgc tggacgtggt cgtcaacgag
       61 actgcgccgg gccgcgagcg gaggcgcgga cagctcgtgc ttagcggcgg cgcgggcgat
      121 ttcgtctacc tgcgcggcga ccggcactcg atggaccggg cgctcgactt tctcgtggaa
      181 gcggattcac accgaagcaa tgactgagtc gaacggatcg cgggacgacg tgcgacaggc
      241 cgagcccccg agcgaggcgg acgcgccggg ctcacccctg ctcgacgcgg cgaccgtcgt
      301 cctctacgaa ccgcaggacc cgatcaacat cggggcgacg gtgcgggcga tgaagaacat
      361 gggggtgagc gacctccggc tgatccgtcc ggtcccgtac gacctgaacc gcatcgagca
      421 gatcgcccac gacacggccg acgtctaccg ccgcatccgc cacttcgaga cgaccgagga
      481 ggcgctcgcc gactgcgtgc gcgtcgccgc cttcgtcggg aagccgcggg ccgccaagtg
      541 ggcgcgctac gatccgcgcg gcgtcgccga gcacttcgcg agctacgcgc ccgaaggccg
      601 tgtcgcctac ctgttcggcc gcgaggatca cggcctgccg cggagcgccc tcgaccacgc
      661 gcacgtcacc gtcacgatcc cgaccaccgc gcacgcctcg ctcaacctcg cgcaggccgt
      721 gctcgtcgcg ctctacgagc tgcacctcca ggccgggagc gcgacgcgcc ggctgccgcg
      781 cccgcgcaag cacgccccgc cgccgtcgag cgagcaatac gagcgcacct tcgtggacgt
      841 cgagcgggcc ctcgccgcgc tcgacttctt caagacacgc aatcccgagc tcgtgatgcg
      901 ttcgctgcgt tcgatcttct atcgcgccga gcccgacggc cgcgaggtgg atctcgcccg
      961 cgccgtcgcg atcgaggtgc tgcgcacggt ggatcgcgtg gaccgccgcg cctacgagcg
     1021 cggactcgcc gacgcggccg gccacgcggc ggtccccgcg cgcgccgacg agccaccggc
     1081 cgccgagggc tcgcgcgctc cacgtccacc gcgtcgctga ctcccgccca tcccccatcc
     1141 catggcattt ttccgatcgc gcaagccgac ggcgcccacc tcccccgagc cggccgcgca
     1201 ggacgatact ccggaggccg acgaggccac cgaccggttg gccgacgagg aggtggaggg
     1261 cgagggcgag gtgggattca ccgaggagga cgcggcgcgg gagtggcgcg accgcgccga
     1321 ggccgtgctg cccggcggtt cgtccaccgg cagcaagcgc gccgcagccc tcttcggccc
     1381 cgacgatctc gactcggcgg cgcacttcct tcgcgccacg gggtgcgaga tccagacggt
     1441 gggcggggag cggctcgtgg actgcacgat ggcgctcggc gcggtcgcgc tcggctacgc
     1501 cgacccggcg gtgacgcaga acgtcgtcca ggccgcgtcg gcggggaacg tcgccgggat
     1561 gtcgagcgtc ctcgaggtcc agctcgccga acggctctgc gacgtcatcc cctgcgcgga
     1621 gcaggtgcga ttcctgaaga ccggcgccga gggatgcgcc gcggcgattc gcatcgcgcg
     1681 caccgccacc gggcggagcc gcgtcgtcgg cgccggctac ttcggctggc tcgactggtg
     1741 gaccaccgac gccgcgggcg tgcccaccgg cgcccacggc gacttctccc ccgtgccctt
     1801 cgacgacctg ctcgcgctcg agcgggcggc gtcggcggcc gggggcgacc tggccgcggt
     1861 gatcctcgag ccgttcgtcg agcgtccgcc ctcggaaggt tggctggccg gcgcgcgcgc
     1921 gatctgcgag cgcaccggcg ccgtgctgat cttcgacgag atgaagaccg gcttccgcgt
     1981 ccgcacagga ggctggcagg agtacgccgc tgtcgagccc gacctggcgg tcttcgggaa
     2041 ggccctcgcc aacgggtatc ccctggccgc cgtcgtcgga cgcgcggcga tcatggaggc
     2101 ggcgggccgg acctggatct cgtccaccct ggccggcgag accaccgcgc tggccgcggc
     2161 gatggcggtg ctggaccgcc acgacgagga ggacgtctgc gccgcgctct ggtcgatcgg
     2221 cgagtccacg ctcgacgtcg tccgcgcggc ggtgtcggcg agcggggtgc gcggcgtctc
     2281 ggtggagggg atcgcgccga tgtggatgtt ccggttcgac gacccgacgc gccaggatcg
     2341 cttcctgcgc ctggcgcgga accacggcgc gctcttcaag cgcggcgcgt acaactacgc
     2401 cgcgctggcg cacgacgagg aggcgatcgc ggccatcgag cgcgcggcga gctcggcgtt
     2461 cgtcgagctg gtggagcagg agcgggacgg acggtgagcg agccgctgat cgacgtgcac
     2521 gcgcacttcg cgcacgccgg gtgtggccgg gccgactggc gggagctgaa cgcggcgcgg
     2581 atgcgggccg gccggcgcat cggcatcacc tgccacgtcg cctccatcct cggcagctgg
     2641 ggccacagct cgcccaccta cttcgcctca ccggccgacg tggcgcgcgg caacgacgcg
     2701 cagtacgaga tcaccggcgc cgagccgcat cgcgtgcgcg cgtacgtgca cgtgaacccc
     2761 aaccatcccg accacgccct cgcc
//
LOCUS       DASSYW010000807         2346 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1618270, whole genome shotgun sequence.
ACCESSION   DASSYW010000807 DASSYW010000000
VERSION     DASSYW010000807.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2346)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2346)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2346
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1618270"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..303
                     /locus_tag="VFN38_12880"
     CDS             <1..303
                     /locus_tag="VFN38_12880"
                     /inference="COORDINATES: protein motif:HMM:NF013867.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CheR family methyltransferase"
                     /protein_id="HET9012709.1"
                     /translation="RRYFAPAAPFSIVPEVKRLVRFERRDLLAEAPPPGPHHLICCRN
                     VLIYFDRDTQERLFDKFHRALAPDGFLVLGKVETLLGAARTRFVSVDGRERIFRPL"
     gene            300..794
                     /locus_tag="VFN38_12885"
     CDS             300..794
                     /locus_tag="VFN38_12885"
                     /inference="COORDINATES: protein motif:HMM:NF015908.4"
                     /note="catalyzes the conversion of glutamine residues to
                     glutamate on methyl-accepting chemotaxis receptors;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheD"
                     /protein_id="HET9012710.1"
                     /translation="MTRPDSDVRVKVADYAVRQGSQVITTIGLGSCVAIALYDRETRI
                     GALAHILLPNQSMSRETGNPAKFPESLVPLMLEEMHAMGTRNARVSAKIVGGASMFGQ
                     LGNGTGINIGERNVLATREALSAAGVPIIAEDTGLDYGRSVYFHLADGRLEVRSLKKG
                     DRVI"
     gene            784..1869
                     /locus_tag="VFN38_12890"
     CDS             784..1869
                     /locus_tag="VFN38_12890"
                     /EC_number="3.1.1.61"
                     /inference="COORDINATES: protein motif:HMM:NF001965.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0008984 - protein-glutamate methylesterase
                     activity [Evidence IEA];
                     GO_function: GO:0050568 - protein-glutamine glutaminase
                     activity [Evidence IEA];
                     GO_process: GO:0006482 - protein demethylation [Evidence
                     IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0018277 - protein deamination [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis response regulator protein-glutamate
                     methylesterase"
                     /protein_id="HET9012711.1"
                     /translation="MSSSAPATVLVVDDSAFMRRLITQIIDASPEFRVVGTARNGLDA
                     LRQIHALDPCIVTLDVEMPELDGLQTLGYIMSETPRAVVMLSAAATERGADLTLRCLE
                     LGAVDFVRKPSGPISLDLASVAETLLDALRAATQVNLGSVQALARPRSVGTELPAAPL
                     PPPSGATTVVAIASSTGGPRALAEVIPNLPRDLHAAVLVVQHMPAGFTRSLAARLDLM
                     SRLTVAEAQHGDAIQTNHVYLAPGGLHMSVVGDERGVRRLALDSSPPVWGVRPAADPL
                     FNSVAHHFGRSAVGVVLTGMGRDGAEGLRRMREMGGAGVVQDRATSTIYGMPQAALQR
                     AGADRVVALGEVAPAIVALLRAQRGTA"
     gene            1866..>2346
                     /locus_tag="VFN38_12895"
     CDS             1866..>2346
                     /locus_tag="VFN38_12895"
                     /inference="COORDINATES: protein motif:HMM:NF024589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HET9012712.1"
                     /translation="MIEAHWKLARRPFANTPDPAFVYRSPSFAEGFARLLYDATELRG
                     GLSLVTGEIGCGKTMLAGALAEALAGGPCDLVVLPYPRVTASQLLSVLARGLGIERAP
                     RGKLAVIEAIGARLGELHRNGRRPVLVVDEAQLAGPSLLEEIRLLTNHEDRQDKHLHV
                     "
BASE COUNT          304 a          883 c          819 g          340 t
ORIGIN      
        1 cgccgctact tcgcccccgc cgccccgttc tccatcgtgc cggaggtgaa gcgcctcgtg
       61 cggttcgagc ggcgcgacct gctggccgag gcgccgccgc ccggcccgca tcatctcatc
      121 tgttgccgca acgtgctgat ctacttcgat cgcgatacgc aggagcgcct gttcgacaag
      181 ttccaccggg cgctcgcgcc ggatggcttc ctcgtgctcg gaaaggtcga gacgctgctg
      241 ggggcggcgc gcacccgctt cgtctccgtg gacggccgcg agcgcatctt ccggccccta
      301 tgacccgccc cgactccgac gtccgcgtga aggtcgcgga ctacgccgtc cgccagggct
      361 cgcaggtcat cacgaccatc gggctggggt cgtgcgtggc catcgccctc tacgaccggg
      421 agacccggat cggggccctc gcgcacatcc tgctgcccaa ccagtcgatg tcccgcgaga
      481 cgggcaaccc ggccaagttc cccgagtcgc tcgtgccgct catgctcgag gagatgcacg
      541 cgatggggac gcggaacgcg cgcgtcagcg cgaagatcgt cggcggcgcc agcatgttcg
      601 gccagctcgg caacggcacc ggcatcaaca tcggggagcg caacgtcctg gcgacccgcg
      661 aggccctctc ggccgccggg gtcccgatca tcgccgagga cacggggctc gactacgggc
      721 gcagcgtgta cttccatctc gcggacgggc ggctcgaggt gcgctcgctc aagaagggag
      781 atcgtgtcat ctagcgcgcc ggcgacggtg ctcgtggtgg acgacagcgc gttcatgcgc
      841 cgtctcatca cgcagatcat cgacgcctcg ccggagttcc gcgtcgtcgg cacggcccgc
      901 aacggcctcg atgcgctgcg gcagatccat gccctcgacc cgtgcatcgt cacgctcgat
      961 gtcgagatgc ccgagctgga cggcctccag acgctcggct acatcatgag cgagacgccg
     1021 cgcgccgtgg tgatgctgag cgccgccgcc acggagcgcg gcgccgatct cacgctgcgg
     1081 tgcctcgagc tgggcgcggt cgacttcgtc cgcaagccgt ccggcccgat cagcctggac
     1141 ctcgccagcg tcgccgagac cctgctcgac gcgttgcgcg cggcgaccca ggtgaacctc
     1201 ggcagcgtgc aggcgctcgc ccgcccgcgc tccgtcggca ccgagctgcc cgccgccccg
     1261 ctcccgccgc ccagcggcgc caccacggtc gtcgccatcg cctcgtccac cggcgggccg
     1321 cgggcactgg cggaggtcat ccccaacctc ccgcgcgacc tgcacgcggc ggtgctcgtc
     1381 gtgcagcaca tgcccgccgg cttcaccagg agcctcgcgg cgcggctcga cctcatgagc
     1441 cggctcaccg tggccgaggc gcagcatggc gacgcgatcc agaccaacca cgtctatctc
     1501 gccccgggcg ggctgcacat gagcgtcgtg ggcgacgagc gcggcgtgcg ccgcctcgcg
     1561 ctcgattcct ccccgccggt gtggggggtg cgtcccgctg ccgatcctct gttcaattcg
     1621 gtggcgcacc acttcggccg gtcggccgtc ggcgtggtgc tcacgggcat ggggcgcgac
     1681 ggcgccgagg ggttgcggcg gatgcgtgaa atgggaggag cgggcgtggt ccaggaccgc
     1741 gcgacgtcca cgatctacgg catgccgcag gcggccctcc agcgcgccgg cgccgaccgc
     1801 gtcgtcgcgc tgggcgaggt ggccccggcg atcgtcgcgc tgctgcgggc gcagcggggg
     1861 acggcgtgat cgaggcccac tggaagctgg cgcgccggcc gttcgccaac acgccggatc
     1921 cggcgttcgt gtaccgctcc ccctcgttcg ccgaggggtt cgcccgactg ctctacgacg
     1981 ccaccgagct ccggggcggc ctctcgctcg tcaccgggga gatcgggtgc ggcaagacga
     2041 tgctcgccgg cgcgctggcc gaggcgctgg ccggcggccc gtgcgacctc gtcgtgcttc
     2101 cctacccgcg ggtcaccgcc agccagctcc tgtccgtgct ggcgcgcggg ctcgggatcg
     2161 agcgcgcgcc gcgcggcaag ctggccgtca tcgaggcgat cggcgcccgg ctgggcgagc
     2221 tgcaccgtaa cggacggcgc cccgtgctcg tcgttgatga ggcacagctg gccggcccat
     2281 cgctgctcga ggagatccgc ctgctcacga atcacgagga ccgccaggac aagcatctcc
     2341 acgtgg
//
LOCUS       DASSYW010000808         2468 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1417566, whole genome shotgun sequence.
ACCESSION   DASSYW010000808 DASSYW010000000
VERSION     DASSYW010000808.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2468)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2468)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2468
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1417566"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..930
                     /locus_tag="VFN38_12900"
     CDS             <1..930
                     /locus_tag="VFN38_12900"
                     /inference="COORDINATES: protein motif:HMM:TIGR01297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HET9012713.1"
                     /translation="MSPSSAENAVMARAEGSARLVLRGIGLNALLAGVKLAGGIFGNT
                     YALVADAVESGADVFASLLVWGGLAVATQPADDAHPYGYGKAEALAAAVISLMLLGAA
                     GGIAVQAVREIRTPHHVPAPWTLGVLVGVVIVKWVLARRVSAVGTSTGSTAVKADAAH
                     HLSDALTSAAAFIGISLALVGSRVWGGRWESADDWAALAASGVIAFNGVSMARAATYD
                     LMDRMPGPDIVAPIRTVALAVPGVLAIEKLHVRKAGLAYRVTLHVQADPAMPLEDAHA
                     LGGRVKHVILDGLPHVNYVLVHMEPFVDTTHVV"
     gene            939..>2468
                     /locus_tag="VFN38_12905"
     CDS             939..>2468
                     /locus_tag="VFN38_12905"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF013592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family metallopeptidase"
                     /protein_id="HET9012714.1"
                     /translation="MPKLVTLASLVLLCAGAAEAQDSVRFTHADTLRGTNGPERSWWD
                     ATFYDLHVAVSPRDSSVRGWNAIGYRVLRPAREMQIDLKEPLVVDSIVQDGRRLSHRR
                     DGDAFFVRLLAPQRTGDRKTVVVHYHGRPRAAQRAPWDGGFVWAADSLGTPWVASAVQ
                     GFGASAWWPTKDIQADEPDSQRVAITVPDPLIDVSNGRLRSIAHHADRTTTYEWFVAS
                     PINNYDIAVNAGAYAHFSDVYRGENGPLTLDFWPLAYHADTAKVQFAQVTPMLQCFEH
                     WFGPYPWYEDGYKLVETPHLGMEHQSAVAYGNHFVNGYLGRDLSGTGWGLKWDFIIVH
                     ESAHEWFGNSITSKDLADMWVHESFANYSENLYTECRFGKDAGAAYVIGTRSKIQNDK
                     PIVAPFGVNAEGSGDMYYKGGNMLHTIRQLVGDDEKWRGILRGLGATFRHQTVTGLQV
                     QEYISRQAGMDLRPVFAQYLTTTKVPTLEYRLDGTTLSYRWTDVVPGFAMPVRVSFDG
                     ST"
BASE COUNT          383 a          837 c          861 g          387 t
ORIGIN      
        1 atgtccccgt cctccgccga gaacgccgtc atggcccgtg ccgaaggcag cgcccgcctg
       61 gtgctgcgcg gcatcgggct gaacgccctg ctcgccggcg tgaagctggc ggggggcatc
      121 ttcggcaaca cctacgcgct cgtcgcggac gcggtcgagt cgggcgcgga cgtgttcgct
      181 tccctgctcg tctggggagg attggctgtc gcgacgcaac cggccgacga tgcgcatccc
      241 tacgggtacg gcaaggccga ggcactcgcg gcggcggtga tctcgctgat gctgctggga
      301 gcggcggggg gcatcgccgt ccaggccgtg cgcgagatcc ggacgccgca tcacgtgccg
      361 gcgccatgga cgctcggggt gctggtcggc gtggtcatcg tgaagtgggt gcttgcccgg
      421 cgcgtgagcg cggtgggcac ctccacggga agcacggccg tgaaggcgga tgccgcgcac
      481 catctgagcg atgcgctgac gtcggccgcg gcattcatcg gcatctcgct ggcgctggtg
      541 gggagtcgcg tgtggggcgg tcgatgggaa tccgccgacg attgggccgc cctcgccgcg
      601 tcgggcgtga tcgccttcaa cggcgtctcg atggcgcgcg cggcgacgta cgacctgatg
      661 gaccgaatgc cgggaccgga tatcgtggcg cccatccgca cggtggcgct cgccgtcccc
      721 ggggtgctgg cgatcgagaa gctgcatgtg cggaaggccg gcttggccta tcgcgtcacg
      781 ctgcacgtcc aggccgatcc cgccatgcca ctcgaggacg cgcacgcgct gggcggtcgt
      841 gtcaagcacg tcatcctcga cggcctcccg cacgtgaact acgtgctggt gcacatggag
      901 ccattcgtgg acacgacgca cgtcgtatag cttccggcat gccgaaactc gtcacgctcg
      961 cctcgctggt gctcctgtgt gccggcgccg ccgaggcgca ggactccgtc cgcttcaccc
     1021 acgccgacac cctgcgcggc accaacggtc cggagcggag ctggtgggac gcgaccttct
     1081 acgacctgca cgtcgccgtg agcccccgcg acagcagcgt gcgcggatgg aacgcgatcg
     1141 gctatcgggt gctgcgcccg gcgcgcgaga tgcagatcga cctcaaggag ccgctcgtcg
     1201 tcgacagcat cgtgcaggat ggccgccggc tgtcgcatcg gcgcgatggg gacgcgttct
     1261 tcgtccgtct gctcgccccg cagcgcacgg gtgaccggaa gacggtcgtc gtgcactatc
     1321 acgggcgtcc gcgcgccgca cagcgcgccc cctgggacgg cgggttcgtc tgggccgccg
     1381 acagcctcgg caccccatgg gtggcgtcgg cggtgcaggg gttcggcgcg agcgcgtggt
     1441 ggccgacgaa ggacatccag gccgacgagc cggacagtca acgggtggcg atcaccgtcc
     1501 ccgatccgct gatcgacgtt tccaacggac ggctccgctc gatcgcgcat cacgccgatc
     1561 gcacgacgac gtacgaatgg ttcgtggcga gcccgatcaa caactacgac atcgccgtga
     1621 acgccggcgc gtacgcgcac ttcagcgacg tctaccgcgg cgagaacggc ccgctgacgc
     1681 tcgacttctg gccgctcgcg tatcacgccg acacggcgaa ggtccagttc gcgcaggtca
     1741 cgccgatgct ccagtgcttc gagcactggt tcggcccgta tccctggtac gaggacggct
     1801 acaagctcgt cgagacgccg cacctcggca tggagcacca gagcgccgtc gcctacggca
     1861 accatttcgt caacggctat ctcggccgcg acctctccgg gaccggctgg ggactcaagt
     1921 gggatttcat catcgtgcac gagagcgccc acgagtggtt cggcaacagc atcacgtcga
     1981 aggacctcgc cgacatgtgg gtccacgaga gcttcgccaa ctattcggag aacctctaca
     2041 ccgagtgccg cttcgggaag gacgccggcg cggcgtacgt catcggcacg cgcagcaaga
     2101 tccagaacga caagcccatc gtcgccccgt tcggcgtgaa tgccgagggg tcgggcgaca
     2161 tgtactacaa gggcggcaac atgctgcaca cgattcgtca gctcgtgggc gacgacgaga
     2221 agtggcgcgg tatcctgcgc ggcctgggtg cgaccttccg ccaccagacc gtgacggggc
     2281 tccaggtgca ggagtacatc tcgcggcagg cgggcatgga cctgcggccg gtgttcgcgc
     2341 agtacctcac gacgacgaag gtccctacgc tcgaataccg gctcgacggc acgacgctgt
     2401 cctatcgctg gaccgacgtc gtgccggggt tcgcgatgcc ggtgcgggtg tcgttcgacg
     2461 gctcgacc
//
LOCUS       DASSYW010000809         2313 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_210168, whole genome shotgun sequence.
ACCESSION   DASSYW010000809 DASSYW010000000
VERSION     DASSYW010000809.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2313)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2313)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2313
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_210168"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..417
                     /locus_tag="VFN38_12910"
     CDS             <1..417
                     /locus_tag="VFN38_12910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012715.1"
                     /translation="TLIRRVQNKDGLVRLVNEWVAAAIREARGEPDSSDPAAVAAALH
                     RQYERFGALIDRSLRQEEASPTLAANAQGGRRAHREWIETAFAAEIARGGPELAGQLI
                     GLCGVELWLVLRRDGGLTADQTRETVAHLIRSVLPA"
     gene            428..1672
                     /locus_tag="VFN38_12915"
     CDS             428..1672
                     /locus_tag="VFN38_12915"
                     /inference="COORDINATES: protein motif:HMM:NF018434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HET9012716.1"
                     /translation="MARILAYTTPATGHVFPLVPGLLALKDRGHEVRLVGSADHVDEL
                     RAAGLEAVAVDPSTAKAIKDYEVQGRDRPHRGLHDLLGRGDAQRADLERHIAAYRPDA
                     LLIDTIAYGAAIGAEKSGLPWVSITPSLIPFPGKGIPPYGLGLKPMRGPLGFLRDKLL
                     FKVVLREYTKAMLPRLNALRANAGLEPVADPIANLYRPDRILALTGAPLEYARVDTPA
                     HVRFVGAQLWDPPAQTPAWLDEPGDPWVLVTCSTEYQGDEALAATAIEGLRGEPVRVI
                     VTLADAAQGASELPRADNVRVERFVAHGPVLERAAAVVCHGGMGIVQKAVAAGVPIVA
                     VPFGRDQPEVGRRIAEAGAGVLVKQKDLSAARIRSAVRQARLMRPVVVSSGGPASFAG
                     AVEEIIPAGLELEAHCDRSLIS"
     gene            complement(1759..>2313)
                     /locus_tag="VFN38_12920"
     CDS             complement(1759..>2313)
                     /locus_tag="VFN38_12920"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HET9012717.1"
                     /translation="RAMAKALGWGAEEQDLVHTAGLLHDIGKFAFPDSILLADTRLTD
                     EQWQQVKRHPEDGAAIVRRIDGYAPVAEVIHAHHERWDGRGYPRALRGEAIPFAARII
                     AVADTYDVITARDSYRKPVSVQDAIRELRRSAGGQLDPHVVEVFIGLLTAGDLSFGHG
                     DDADFEAELGFGRRVQAHALPRTR"
BASE COUNT          326 a          810 c          846 g          331 t
ORIGIN      
        1 acgctgatcc gccgcgtcca gaacaaggac ggtctggtcc ggctggtgaa cgagtgggtg
       61 gccgcggcga tccgcgaggc ccggggcgag ccggacagct cagaccccgc ggccgtcgcc
      121 gccgcgctcc accgtcagta cgagcgcttc ggcgccttga tcgaccggtc gctgcgccag
      181 gaagaggcct cgccgaccct ggcggccaac gcgcagggcg gccggcgcgc gcaccgcgag
      241 tggatcgaga ccgcgttcgc ggccgagatc gcccgcggcg gccccgagct ggcgggtcag
      301 ctgatcgggc tgtgcggcgt cgagctgtgg ctcgtgctgc gccgcgacgg cgggctgacc
      361 gccgaccaga cgcgcgagac ggtcgcgcac ctcatccgca gcgtgctccc cgcataagga
      421 ctcccatatg gcacggattc tcgcctacac cacgcccgcc accgggcacg tcttcccgct
      481 cgtccccggc ctgctggcgc tcaaggaccg cggccacgag gtgcgccttg tcggctctgc
      541 cgaccacgtc gacgagctgc gcgccgccgg cctggaggcc gtcgcggtcg acccgagcac
      601 ggcgaaggcc atcaaggact acgaggtcca gggccgggac cgcccgcacc gcggcctgca
      661 cgacctgctc ggccgcggcg acgcgcagcg cgcggacctc gagcgccaca tcgccgcgta
      721 ccgccccgac gcgctgttga tcgacacgat cgcctacggc gccgcgatcg gcgccgagaa
      781 gtcggggttg ccgtgggtgt cgatcacgcc gtcgctgatc ccgttcccgg gcaagggcat
      841 cccgccctac gggctcgggc tgaagccgat gcgcggcccg ctcggcttcc tgcgcgacaa
      901 gctgctgttc aaggtcgtac tgcgcgagta caccaaggcg atgctgccgc ggctgaacgc
      961 actgcgcgcg aatgccgggc tggagccggt ggccgacccg atcgcgaacc tgtaccgccc
     1021 ggatcgcatc ctggcgctga ccggtgcgcc gctcgagtac gcgcgcgtgg acacgcccgc
     1081 gcacgtgcgc ttcgtgggcg cacagctgtg ggacccgccg gcgcagacgc cggcatggct
     1141 ggacgagccg ggcgacccgt gggtgctcgt gacctgctcg accgaatatc agggggacga
     1201 ggcactggcc gcgacggcca tcgaaggcct gcgcggtgaa ccggtgcggg tgatcgtgac
     1261 gctcgccgac gccgcccagg gggcgagcga gcttccgcga gcggacaacg tccgggtcga
     1321 gcgcttcgtc gcgcatggcc cggtgctgga acgcgccgcg gcggtcgtct gccacggcgg
     1381 catgggaatc gtgcagaagg cggttgcggc cggcgtgccg atcgtggcgg tgccgttcgg
     1441 ccgcgatcag ccggaggtgg gacggcggat cgccgaagcg ggtgccggcg tcctcgtgaa
     1501 gcagaaggac ctgagcgctg ctcgcatcag gtccgcggtg cgccaggcgc gactcatgcg
     1561 cccggtcgtg gtgtcctccg gtgggccggc gagctttgcc ggcgcagtgg aggagatcat
     1621 ccccgcggga ctagaacttg aagcccattg tgatcgctcc ttgatcagct agaagtgttt
     1681 gatatgcagg gaattcattg ccctgcgtaa tcacttcatc ggccccctat agcgtgagca
     1741 ttaggggtga gcaaacgatt acctcgttcg ggggagggcg tgtgcctgga cccgtcttcc
     1801 gaagcccagc tcggcctcga agtcggcgtc gtcgccgtgc ccgaaggaga gatcgccggc
     1861 cgtcagcagg ccgatgaaga cctccacgac atgggggtcg agctggccgc cggcggagcg
     1921 ccgcagctcc cggatcgcgt cctggacgga gaccggcttg cggtaggaat cgcgcgcggt
     1981 gatcacgtcg taggtgtcgg cgacggcgat gatgcgcgcc gcgaagggga tcgcctcgcc
     2041 gcgcagcgcg cgcgggtagc cgcggccgtc ccagcgctcg tggtgggcgt ggatgacctc
     2101 cgccaccggg gcgtagccgt cgatccgccg cacgatcgcc gcgccgtcct ccgggtggcg
     2161 cttgacctgc tgccactgct cgtcggtcag gcgcgtgtcg gcgagcagga tcgagtccgg
     2221 gaacgcgaac ttgccgatgt catgcaacag ccccgccgtg tggacgaggt cctgctcctc
     2281 cgcgccccag ccgagcgcct tggccatcgc ccg
//
LOCUS       DASSYW010000810         2005 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1487250, whole genome shotgun sequence.
ACCESSION   DASSYW010000810 DASSYW010000000
VERSION     DASSYW010000810.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2005)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2005)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2005
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1487250"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..436)
                     /locus_tag="VFN38_12925"
     CDS             complement(<1..436)
                     /locus_tag="VFN38_12925"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: protein motif:HMM:TIGR00566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004049 - anthranilate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0046820 - 4-amino-4-deoxychorismate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HET9012718.1"
                     /translation="MRATRRQNKTVRVSRRPGPLVVLDNYDSFTWNLVQALGALGAQV
                     DVRRNDALSTARLAALGPCGLVVSPGPGRPEAAGIAVDAIRQLHGRVPILGVCLGHQA
                     IAVAFGGRVVRAERVMHGKTSRLTHTGSGIFRGLDNPFLATRY"
     gene            complement(526..1416)
                     /locus_tag="VFN38_12930"
     CDS             complement(526..1416)
                     /locus_tag="VFN38_12930"
                     /inference="COORDINATES: protein motif:HMM:NF039482.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+)/NADH kinase"
                     /protein_id="HET9012719.1"
                     /translation="MDLALVVNARKKSSPRVLQELRASVAGTTHRMLLWASSAQELEK
                     RSDCGMAMRGYEVVDDIHAGDVVLALGGDGTLLTAVRLLGDDLRPLLGINLGSLGFLT
                     DTPEDRAAEALARVLGGDYRLDPRMLLEVEHRAPGTNGMRARALNDVVLHGPSARVVE
                     VGLRAAGVDLGSTLADGMVVATPSGSTAYSLSAGGPIVSPRLRALIVTPISAHTLSMR
                     PLVVGADEEVEIELRRLSAAHADISVDGHLCWPLPAGDSIRVRAAPRDLQLVVTQEQG
                     FYRTLRSKLGWGQGRPAPPP"
     gene            complement(1426..>2005)
                     /locus_tag="VFN38_12935"
     CDS             complement(1426..>2005)
                     /locus_tag="VFN38_12935"
                     /inference="COORDINATES: protein motif:HMM:NF014799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transketolase C-terminal domain-containing
                     protein"
                     /protein_id="HET9012720.1"
                     /translation="ADELRAMLYTAVPYEAGPVAIRFPRGNVPAAPAADRFETLPIGK
                     ARLLRAGEDVALIGYGTSVEWCQRAADLLAADGILPTVVNARFAKPLDAELLLRIVAQ
                     HRVVLVVEEHQLSGGFGAAVLELCEEHGVAQGHVRRLGIPDRFVEQAPRPRQLESLGL
                     VPAAIAARVRRELGTTRLDSDASHPHSAGSRP"
BASE COUNT          309 a          714 c          729 g          253 t
ORIGIN      
        1 ggtagcgggt ggccaagaaa ggattgtcga ggccgcggaa gatgccgctc cccgtgtggg
       61 tgaggcgcga ggtcttgccg tgcatgacgc gctcggcgcg cacgacgcgg ccgccgaagg
      121 caacggcgat cgcctggtgt ccgagacaga cgccgaggat gggaacccgc ccgtgcagct
      181 ggcggatggc gtcgacggcg atcccggccg cttcgggccg ccccggaccg ggcgacacca
      241 ccagcccgca cggcccgagc gccgcgaggc gcgcagtact gagcgcatcg ttgcgccgca
      301 cgtcgacctg cgctccgagc gcgcccaagg cttgcaccag gttccacgtg aaggaatcgt
      361 aattgtcgag cacgacgagc gggccgggac ggcgggacac acgcacggtc ttgttctggc
      421 gccgcgtcgc gcgcatggaa cctcgactcc ccgtcaccgg acgtggctgc gtccggaacc
      481 cgcgccgcgg gcgggcgcga ggataccacc gcctccgcac tttggtcacg gcggcggtgc
      541 cgggcgtccc tggccccagc cgagcttgct gcgcagggtg cgatagaacc cctgctcctg
      601 ggtgacgacc agctgcaggt cgcgtggcgc cgcacgcacg cggatgctgt cgcccgcggg
      661 cagtggccag cacagatgcc cgtcgacact gatatcggcg tgcgccgcgc tcaagcgccg
      721 cagctcgatc tcgacctcct cgtcggcccc gacgacgagc ggacgcatcg acagcgtgtg
      781 cgcgctgatg ggggtgacga tgagcgcgcg cagccgcggc gacacgatgg gaccgccggc
      841 ggacaggctg taggccgtgc tgcccgaggg cgtcgccacc accatgccgt cggcgagcgt
      901 gctgccgaga tcgacgccgg cggcccgtag cccgacctcc acgacgcgcg ccgacggacc
      961 gtgcaggacg acgtcgttca gcgcccgtgc ccgcatgccg ttcgtgccgg gagcgcggtg
     1021 ctccacctcc agcaacatgc ggggatccaa gcggtagtcg ccacccaaca cccgggcgag
     1081 ggcctcggcg gcgcggtcct ccggcgtgtc ggtgaggaat ccgagactgc ccaagttgat
     1141 gcccagcaac gggcgcaagt cgtccccgag caggcggacg gcggtcaaca gggtgccatc
     1201 gccgccgaga gcgagcacca catcgccggc atggatgtcg tcgaccacct cgtagccgcg
     1261 catcgccatg ccgcaatcgg agcgcttctc gagctcctgc gccgagctgg cccaaagcaa
     1321 catgcgatgc gtcgtcccgg cgacgctcgc gcgcagctcc tgcagaacgc gcggcgaact
     1381 cttcttcctg gcattgacga cgagggcgag atccacgctc tccccctacg ggcgcgaccc
     1441 ggccgaatgc gggtgtgagg cgtcggaatc gaggcgcgtg gtcccgagct cgcgccgcac
     1501 acgcgccgcg atcgccgccg gcacgagacc gagggactcg agctggcgcg gacgcggcgc
     1561 ctgctcgacg aagcggtccg ggatgccgag ccggcgcacg tggccttgcg ccacgccgtg
     1621 ctcctcgcac agctcgagca cggcggcgcc gaagcccccc gacagctggt gttcctcgac
     1681 gacgagaacg acacggtgct gggcgacgat ccgcagcagg agttcggcgt cgagaggctt
     1741 ggcgaagcgt gcgttcacca ccgtgggcag gatgccgtcc gcggcgagca gatcggcggc
     1801 gcgctggcac cactcgacgc tggtgccgta gccgatcagc gccacgtcct cgcccgcgcg
     1861 aagcaagcgc gccttgccga tgggcagggt ctcgaaacga tcggcggcgg gagcggcggg
     1921 gacgttgccg cgtgggaagc ggatggcgac cggtcccgcc tcgtacggca ccgccgtgta
     1981 gagcatggcg cgcagctcgt cggcg
//
LOCUS       DASSYW010000811         2208 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1020928, whole genome shotgun sequence.
ACCESSION   DASSYW010000811 DASSYW010000000
VERSION     DASSYW010000811.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2208)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2208)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2208
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1020928"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(115..390)
                     /locus_tag="VFN38_12940"
     CDS             complement(115..390)
                     /locus_tag="VFN38_12940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012721.1"
                     /translation="MSQVAMPNVLAVAGPNSSYQLPGAEPAGFWAGLWHGLICPITFV
                     VSLFSPGVRIYEQNNLGRLYDFGFLLGASASLGGGGSQAASDTRGAV"
     gene            complement(524..1003)
                     /locus_tag="VFN38_12945"
     CDS             complement(524..1003)
                     /locus_tag="VFN38_12945"
                     /inference="COORDINATES: protein motif:HMM:NF022072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HET9012722.1"
                     /translation="MIAIETSVEIAAPPAVVWARLCDADMPATAPCEFRLGALGPPQP
                     LRCELPTGVGGIGQERRCVTTRGIVTQRITAWVEAEHLAFELVAEAAGLGAHVQAMKD
                     DFWLTPLGPARTRLTRRTALVPRRPCPRLRGLALRVAVRRVHRFTMRGFAAAAVAAV"
     gene            complement(1426..>2208)
                     /locus_tag="VFN38_12950"
     CDS             complement(1426..>2208)
                     /locus_tag="VFN38_12950"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HET9012723.1"
                     /translation="ASRFLAARLVERGVAALIYDKRGVGNSGGDWRTSSLDDLAGDAI
                     AGVELLRHEAGIDPERIGIHGHSQGGTMAPMVAVRSGHVAFIVASSASAVPSDSAEIY
                     SLLNTVYPAAVSRSDSADAHDYVAALVQAAYHGAPRAGFDSLAARVSGRPWYFAPPPP
                     TASYWSFSRSFNEYKPLEWWRQVRVPVLLLYGADDRRVPARESAVRITAAVAQGSSAI
                     DLTTRILPGADHTFRQPPGAGGWPVTARDYLPTLLDWITARR"
BASE COUNT          358 a          781 c          791 g          278 t
ORIGIN      
        1 aacgccaaag ctcagctgcg ggcccccgaa tatggggaaa gccaccgacg ggtcgcgatg
       61 attaacgcgc tctcacaatg atgctcatca tggcccgtcg gctgcagggc ctcgttagac
      121 cgccccgcgc gtgtcgctcg ccgcctgcga gccgccgcca cccagtgacg ccgaggcgcc
      181 cagcaggaat ccgaaatcgt agaggcgacc cagattgttc tgctcgtaga tgcgtacgcc
      241 aggactgaac aggctcacga cgaacgtgat cgggcaaatg agcccgtgcc agagccccgc
      301 ccagaagccc gccggctccg cgcccggcag ctggtagctc gaattcgggc cggcgacggc
      361 gagcacattg ggcatggcga cctgtgacac tggaagcgat ccacgtggcg gactaacgcc
      421 ccagctcagc tgcgggcact attcgggctc aaagatctcg cactgggtcg aggctcgcca
      481 gaggactgga ctctgcgtgg tctgcccgtc aggcgcagcg acgttagacg gctgcaacag
      541 ccgccgctgc gaagccccgc atcgtgaagc gatgcacgcg gcgcacggcg acccgcagcg
      601 cgagccctcg gaggcgcgga cacggccgac gcggcacgag cgccgtccgg cgcgtgagcc
      661 gcgtccgggc gggccccagc ggcgtgagcc agaagtcatc cttcatcgcc tgcacatggg
      721 cgccgagccc cgcggcctcg gcgaccagct cgaaggccag gtgctccgcc tcgacccacg
      781 ccgtgatgcg ctgggtgacg atgccgcgcg tggtgacgca gcgacgctcc tgcccgatac
      841 cgccgacgcc ggtcgggagc tcgcagcgga ggggttgggg agggccgagc gcgccgagcc
      901 ggaactcgca gggcgccgtc gcgggcatgt cggcgtcgca gaggcgcgcc cagacgacag
      961 ccggcggcgc cgcgatctcc acagaggttt cgatcgcgat catgtgggcc gaggaggggc
     1021 caagggaaag ggcagccgtc cgacggagat catgcgacgg agaaacggca attccagcga
     1081 acgctcgcgg cccaatgtgc actgccgccc cgagcgcgca tggtcaggtg ccgccactgc
     1141 atgcggttac gcttcgggcg cgagcttgcg gcgtgatgct cggcagcgac gccccgctgc
     1201 ctgatctgcg aagtctgctg ccggagtcga aaggacgcca gaccggcacc gcgtcgccga
     1261 cggttgccga cggtcgccga cggtcgcgta cagtcgccga cggtcgcgga ggactgcagc
     1321 cgcccgcagt gacaaggcat caggtgccgt ccctgtggcg gtgacccgtc ggcctctggc
     1381 agctcgaggc gcgaggatgg cgcgtcggca acgccggcct gcccgctacc ggcgcgcggt
     1441 gatccagtcg agcagcgtcg gcaggtagtc gcgcgcggtg accggccagc cgcccgcacc
     1501 cggcggctgg cgaaaggtgt ggtccgcgcc gggcaggatc cgcgtcgtca ggtcgatcgc
     1561 cgagctgccc tgcgccaccg ccgcggtgat gcgcaccgcg ctctcgcgtg ccggcacgcg
     1621 ccggtcgtcg gcgccgtaga gcaggagcac ggggacgcgc acctgccgcc accactcgag
     1681 cggcttgtac tcgttgaacg agcgcgagaa cgaccagtac gacgcggtcg gcggcggcgg
     1741 cgcgaaatac cacgggcgtc cgctgacgcg cgcggcgagc gaatcgaacc ccgcgcgcgg
     1801 cgcgccgtga tacgccgcct gcacgagcgc cgcgacgtag tcgtgcgcgt cggcggaatc
     1861 cgaccggctc acggccgccg gatacacggt gttgagcaga ctgtagatct cggccgagtc
     1921 gctcggcacc gcggaggccg acgaggcgac gatgaaggcg acgtgaccgg atcgcacggc
     1981 caccatcggc gccatcgtgc caccctggct gtgcccgtgg atcccgatcc gctccggatc
     2041 gatgcccgcc tcgtgccgca gcagctcgac gcccgcgatc gcgtcgccgg cgagatcgtc
     2101 gagggatgat gtgcgccagt cgccgccgga atttcccacg ccgcgcttgt cgtagatgag
     2161 cgcggcgacg ccccgctcca cgagtcgcgc cgccaggaag cgcgacgc
//
LOCUS       DASSYW010000812         2166 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_316653, whole genome shotgun sequence.
ACCESSION   DASSYW010000812 DASSYW010000000
VERSION     DASSYW010000812.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2166)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2166)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2166
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_316653"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            36..767
                     /locus_tag="VFN38_12955"
     CDS             36..767
                     /locus_tag="VFN38_12955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c3 family protein"
                     /protein_id="HET9012724.1"
                     /translation="MTQRRKWTAIPGLFVLVIGAVVLSAYSGASSSQGNQPTQPINFP
                     HPRHAGAVADSGLGMNCLYCHNSANKSQDVGMPAVSTCMGCHTAAGVQKPEIQKLKKY
                     ADAKKPIPWVRIHKVPEYVHFPHVRHVNAGVTCQTCHGQVQKMAQVYQYASLNMGWCI
                     NCHVNGYDPKEGQKAAGYDSVPPAGYSGGAPYGTPGTRAGISLASPGMNVPDSARAPA
                     VASNAANTPSAERRRARYDCASCHY"
     gene            789..>2166
                     /locus_tag="VFN38_12960"
     CDS             789..>2166
                     /locus_tag="VFN38_12960"
                     /inference="COORDINATES: protein motif:HMM:NF012602.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HET9012725.1"
                     /translation="MSNQAGSTGVKRRDFLKVLGASGAAVATVGCSSEKVGNLVPYLV
                     HPDETVAGVSTYYATTCRECAASCGVIAETRDGRVTKLEGNPEHPLNRGALCARGQSA
                     LQGLYNPDRLRGPMVKEGGVWKAIDWDRAETLLTQKLGEARSRGAAANAVFLNQHETG
                     SFPAFLDAWLTGLGMRPHLSVDFEADSAVIEANRAAYGVAWPRLSFQDARLIVSFGAD
                     FLDGWGLSVPQQLDFADARAKIEGAPRFVYVGPRRSLTGLNADQWIACRPGTELTIAN
                     ALAGKGSLADAANVSGVAEATLTRLQQELTAAKPALVLAGARGPDALALAQAVVALNQ
                     AAGAVGTTIRSSEPMTAFDGAARVADVLAAVEQMRAGAVPIAFVRGANPAFSLPAGAR
                     FAEAFAKVPFKVSFSMYPDETTELCDLILPDLHPLESWGDAQAGSSAISMQQPAMDPV
                     FSGTRATAD"
BASE COUNT          346 a          762 c          736 g          322 t
ORIGIN      
        1 ttgtgctccc tcagactttc ccacacccca tcgcgatgac gcagcgaagg aagtggacgg
       61 cgattccggg cttgttcgtg ctcgtgatcg gcgccgtcgt gctctccgct tacagtggcg
      121 catcatcctc gcagggcaac cagcccaccc agcccatcaa cttcccgcac ccgagacacg
      181 ccggtgcggt cgcggacagt gggctcggga tgaactgcct ctactgccac aactccgcca
      241 acaagtcgca ggacgtgggt atgcccgcgg tgagcacctg catggggtgt cacacggccg
      301 ccggagtgca gaagccagag atccagaagc tgaagaagta cgccgacgcg aagaagccga
      361 tcccctgggt tcgcatccac aaggtgcccg agtacgtgca cttcccgcac gtgcgtcacg
      421 tcaacgccgg cgtcacctgc cagacctgcc acgggcaggt gcagaagatg gcgcaggtct
      481 accagtacgc gtcgctgaac atggggtggt gcatcaactg ccacgtgaac ggctacgatc
      541 ccaaggaagg gcagaaggcc gccgggtacg acagcgtgcc gccggccggc tactcgggtg
      601 gcgcgccgta cggcacgccg ggcacgcggg ccgggatctc gctcgcgtca ccggggatga
      661 acgtccctga ctcggcgcgt gcacccgccg tggcttccaa cgccgccaat accccatcgg
      721 ccgaacgtcg gcgcgcgcgt tacgactgcg cgtcctgtca ctactagacc gcccgaggaa
      781 tcgatcgaat gagcaaccaa gcggggtcga cgggtgtaaa gcgccgtgac ttcctgaagg
      841 tgctcggagc gtctggtgcc gccgtcgcga cggtgggctg cagctccgag aaggtcggca
      901 acctcgtgcc ctacctcgtc catccggacg agacggtcgc cggggtctcg acgtactacg
      961 ccaccacctg ccgcgagtgc gccgccagct gcggcgtcat cgccgagacg cgcgatgggc
     1021 gggtgacgaa gctcgagggc aacccggagc atccgctgaa tcgtggcgcg ctgtgcgcgc
     1081 gcgggcagtc ggcgctgcag gggctgtaca atcccgatcg cctgcgcggc ccgatggtga
     1141 aagagggcgg cgtctggaag gcgatcgact gggaccgcgc cgagacgctg ctcactcaga
     1201 agctgggcga ggcccggagc cgcggcgccg ccgccaacgc ggtgttcctc aaccagcacg
     1261 agacgggcag ctttccggcg ttcctcgacg cgtggctcac cggtctcggc atgcggccgc
     1321 atctgagcgt cgacttcgag gccgacagcg ccgtcatcga ggcgaatcgc gccgcgtacg
     1381 gcgtcgcgtg gcccaggctc tcgttccagg acgcgcgcct catcgtctcg ttcggcgccg
     1441 acttcctcga cggctgggga ttgtccgtgc cgcagcagct cgacttcgct gacgcacggg
     1501 cgaagatcga gggcgcgccg cgcttcgtgt acgtcgggcc gcgtcgctcc ctcaccggct
     1561 tgaatgcgga ccagtggatc gcatgccggc ccggcaccga gctcaccatc gccaatgcgc
     1621 tcgccggcaa ggggagcctg gccgacgccg ccaacgtcag cggcgtcgcc gaggcgacgc
     1681 tcacgcggct gcaacaagag ctcaccgcgg cgaagccggc gctcgttctc gccggcgcgc
     1741 gcggtcccga cgcgctcgcg ctcgcccagg ccgtcgtcgc actgaatcag gcggctggcg
     1801 cggtaggcac cacgatccgc agcagcgagc cgatgaccgc attcgacggc gccgcgcgcg
     1861 tcgccgacgt gctcgcggcg gtggagcaga tgcgtgccgg cgcggtgccg atcgccttcg
     1921 tgcgcggcgc caaccctgcc ttctcgctcc ccgccggggc tcgcttcgcc gaggcgttcg
     1981 cgaaggtgcc gttcaaggtc agcttctcga tgtacccgga cgagaccacc gagctgtgcg
     2041 atctcatcct ccccgatctg catccgctcg agtcgtgggg tgacgcgcag gcgggatcga
     2101 gcgcgatctc gatgcagcag cccgcgatgg acccggtgtt ctcgggcacg cgtgccacgg
     2161 cggacg
//
LOCUS       DASSYW010000813         2896 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1374995, whole genome shotgun sequence.
ACCESSION   DASSYW010000813 DASSYW010000000
VERSION     DASSYW010000813.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2896)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2896)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2896
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1374995"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            112..792
                     /locus_tag="VFN38_12965"
     CDS             112..792
                     /locus_tag="VFN38_12965"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HET9012726.1"
                     /translation="MPTATHPAPHVTAPRRRAAPVPSTTTLGVVYDSENYAMLNRPIE
                     TERHARRIMRYLRPHDGQRLLEVGCGRGWLTQRMQERFPSTYGVDVNPRSILHAVTAN
                     LHVMDATALDFDDAQFDLVYSFHAIEHIVDADAALREMQRVLRPGGRILLVYPAEPIR
                     GLYAMPGAWLGFGNPLLARRLHVHRFTPARIVRRALRCGLTHVESALDFLITPQFMTV
                     LEKPAATS"
     gene            789..1751
                     /locus_tag="VFN38_12970"
     CDS             789..1751
                     /locus_tag="VFN38_12970"
                     /inference="COORDINATES: protein motif:HMM:NF015651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase transmembrane
                     domain-containing protein"
                     /protein_id="HET9012727.1"
                     /translation="MTASRRRLLRIGGLVVLAALLALFARTLDWRSTLLVLRGADPRL
                     VAAALAVNLLSLGLKGVRWWVFLRPLGDVPLPLVLRATFAGASLNNLVVAQGGEGARV
                     LLVSRAAGVSSAGVLAALALERALDAVSYLVLLVAAAWLVDLPPHIARWRAGAAAALG
                     LAVLVLVIVGGTARRRAGDPLPVAAGGGRLTDYVRRMRSGGAMAATPGRLAAALLISL
                     AAWALQVATYHLAARAAQLPLPLAGSVAAMLAVGISFLVRATPGNVGIFQVIYALTVR
                     WFGVAEGPAIAVALLIQTLQVVPTVVVGSIVAPRLLRGTADGGG"
     gene            1945..>2896
                     /locus_tag="VFN38_12975"
     CDS             1945..>2896
                     /locus_tag="VFN38_12975"
                     /inference="COORDINATES: protein motif:HMM:NF014615.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homocysteine S-methyltransferase family protein"
                     /protein_id="HET9012728.1"
                     /translation="MSEASSRSSHPYLRALGERVLVYDGAMGTNIQRHNPTAEDFGGK
                     ALEGCNDNLVLTRPDIIQSIHESFLAVGCDVVETCTFQSTPHRLKEWGLYEKARELNV
                     QAAKLARAACDKYATPEQPRFVAGSIGPTGMLPSSSDPALSDITFEALAETYYLQAKY
                     LVEGGVDVLLVETAQDILEVKAALTGFERLFAELGRRIPVQTQVTLDVSGRMLLGTDI
                     ASALTTLEAMRVDVVGLNCSTGPEHMREPVRFLTEHASLPISVIPNAGLPLNTGTGEA
                     IYPLEPLPMAGMLRDFVKDFGVRIVGGCCGTTPEHLAAIVS"
BASE COUNT          375 a         1099 c          958 g          464 t
ORIGIN      
        1 cgcgattcgg cccctcgcgc gtcgacggcc aactcgcgtg agccgatcgg ccgctcgtcg
       61 ccgcgttcct gaacggatcg ctcgccgaac gccgaccctc accgagaccc catgccgacc
      121 gccacgcacc ccgcgcccca cgtcaccgcg ccgcgacgac gcgcggcccc cgttccgtcg
      181 acgacgaccc tgggcgtcgt ctacgattcg gagaactacg cgatgctcaa ccgcccgatc
      241 gagacggagc ggcacgcgcg ccggatcatg cgctatctcc gtccgcacga cggccagcgc
      301 ctgctcgagg tcggctgcgg ccgcggctgg ctgacgcagc gcatgcagga gcgcttcccc
      361 tcgacttacg gcgtggacgt gaatccgcga tccatcctgc acgccgtgac cgccaacctg
      421 cacgtgatgg atgccacggc actcgacttc gacgacgcgc agttcgacct cgtgtactcg
      481 ttccacgcga tcgagcacat cgtcgatgcc gacgccgccc tgcgcgagat gcagcgggtg
      541 ctgcggccgg gcggccggat cctgctcgtg tatccggccg agccgatccg aggcctgtac
      601 gcgatgcccg gcgcctggct cggcttcggg aacccgctgc tcgcgcggcg gctgcacgtc
      661 cacaggttca cgccggcacg gatcgtccgc cgcgcgctgc gatgcgggct cacccacgtg
      721 gagagcgcgc tggactttct catcacgccg cagttcatga cggtgctcga gaagccggcg
      781 gctacctcgt gaccgcgtcg cgccgccggc tgctgcggat cggcggcctg gtcgtgctgg
      841 ccgcgctcct cgcgctcttc gcgcgcacgc tcgattggcg ctcgacgctg ctcgtgctgc
      901 gcggggccga tccccggctc gtggccgccg cgctcgcggt caacctcctg tcgctcggcc
      961 tcaagggcgt gcgctggtgg gtgttccttc ggccgctggg cgacgtcccc ctgccgctcg
     1021 tcctgcgggc cacctttgcc ggggcgtcgc tcaacaacct cgtggtcgcg cagggcggcg
     1081 agggggcacg ggtgctgctc gtgtcgcgcg ccgccggcgt gtcgagcgcc ggcgtgctcg
     1141 cggcgctggc gctcgagcga gcgctcgacg ccgtgagcta tctcgtcctc ctcgtcgccg
     1201 cagcgtggct cgtcgatctg ccgccgcaca tagcgcgctg gcgcgccggc gccgcggcgg
     1261 cactcggcct cgcggtgctc gtgctcgtca tcgtcggcgg caccgcccgt cgtcgcgccg
     1321 gggaccccct cccggtggct gcaggcggcg gacgcctgac cgactacgta cggcggatgc
     1381 gcagcggcgg cgcgatggcc gccacgcccg gccgcctcgc ggcggcgctc ctgatctcgc
     1441 tcgcggcgtg ggcgcttcag gtggcgacct atcatctggc cgcgcgcgcc gcacagctcc
     1501 cgctccccct cgccggctcc gtggccgcga tgctcgccgt cggcatcagc tttctcgtcc
     1561 gtgccacccc cggcaacgtg ggcatcttcc aggtgatcta tgcgctcacc gtccgctggt
     1621 tcggtgtcgc cgaaggaccg gccatcgccg tggcgctgct catccagacg ctgcaggtgg
     1681 tgccgacggt ggtcgtggga tcgatcgtcg cgccgcgcct gctgcgcgga accgcggacg
     1741 gaggggggtg attcgtcacc gcagcgaggc tccgcggcac ccccgcacgc ttgccaggaa
     1801 cgagccgctc ccctatctat agagggcagc tcacaaccgt tcctcgtggc gatttcaagc
     1861 aaattgcggc cacgttaatc ccctgctaaa gcgcgagccc gcacgccgat cgcgtttggg
     1921 ctcctttttt tgtcggtaac tgtcatgtcc gaagcctcgt cccgttcgtc gcatccctac
     1981 ctccgcgccc tcggcgagcg cgtgctcgtc tacgacggcg cgatgggcac caacatccag
     2041 cgccacaacc cgacggccga ggacttcggc ggcaaggcgc tcgaggggtg caacgacaac
     2101 ctcgtgctca cgcggcccga catcatccag tccatccacg agtcgtttct cgccgtgggc
     2161 tgcgacgtcg tggagacctg caccttccag agcacgccgc atcggctgaa ggagtggggg
     2221 ctgtacgaga aggcgcgcga gctcaacgtc caggccgcga agctcgcgcg cgccgcctgt
     2281 gacaagtacg cgacgcccga gcagccgcgc ttcgtcgccg gctcgatcgg tcccaccggc
     2341 atgctgccct cgagcagcga tcccgcgctc tcggacatca ccttcgaggc gctggccgag
     2401 acctactacc tccaggcgaa atacctggtc gagggcggcg tcgacgtgct gctcgtcgag
     2461 accgcgcagg acatcctcga ggtgaaggcc gccctcaccg gtttcgagcg gctgttcgcc
     2521 gagctcgggc gccgcatccc ggtgcagacg caggtcacgc tcgacgtcag cggccgcatg
     2581 ctgctcggca ccgacatcgc cagcgcgctg accaccctcg aggcgatgcg cgtggacgtc
     2641 gtgggactca actgctccac gggtcccgag cacatgcgcg agccggtgcg cttcctcacc
     2701 gagcacgcgt cgctgcccat ctccgtcatt ccgaacgcag ggctgcccct caacaccggc
     2761 accggcgagg cgatctaccc cctcgagccg ctgccgatgg cgggcatgct gcgcgacttc
     2821 gtgaaggatt tcggcgtgcg gatcgtcggc ggctgctgcg gcacgacccc ggagcacctg
     2881 gcggccatcg tgtccg
//
LOCUS       DASSYW010000814         2293 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_283933, whole genome shotgun sequence.
ACCESSION   DASSYW010000814 DASSYW010000000
VERSION     DASSYW010000814.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2293)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2293)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2293
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_283933"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..489
                     /locus_tag="VFN38_12980"
     CDS             <1..489
                     /locus_tag="VFN38_12980"
                     /inference="COORDINATES: protein motif:HMM:NF044444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012729.1"
                     /translation="TLSRNAFYAYFRDRHDLVARLVERLRGEADATMADYAGAPTPPP
                     GEAGRAALAAAARLYARHGELLRALHDAAARDASAARAWAEFAERSERALTERVREEM
                     RAGTVAGIDPEPTVRALVAMNRTCFFEQIVGKPDADVDALVDVLHTIWTRALYGAPRD
                     QP"
     gene            complement(480..1499)
                     /locus_tag="VFN38_12985"
     CDS             complement(480..1499)
                     /locus_tag="VFN38_12985"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HET9012730.1"
                     /translation="MKGTLALRRIVLCIVALLAVAPGAMAQAPTPTQPAPPPPPAPPP
                     PPPAPEPAPANIEVTIPGALHMKGRAYTVPRDRLRINGRMNPAAAGETVTIELLRGDK
                     RRQRVRAKVGKRGRFHAFVRPRTARRWRVRAVHRKSDAVAAGQSKPVGFTAVTPRAGR
                     GRSGPGVLLLQRGLAKLGYAVPKSGHFDDATGRAVLAYRKVNRMSRTARANWTIFHRV
                     FRGRGAYKLRYPNAGKHVEADLSRQVLVLAQDGKPFRVYHTSSGAPATPTVRGSYRFY
                     RKGPGYNALGMYYSSYFIRGYAIHGYHTVPTYNASHGCLRVPLANAVSIYNWISLGDR
                     IFVYG"
     gene            complement(1633..>2293)
                     /locus_tag="VFN38_12990"
     CDS             complement(1633..>2293)
                     /locus_tag="VFN38_12990"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="CPBP family intramembrane glutamic
                     endopeptidase"
                     /protein_id="HET9012731.1"
                     /translation="GDAPGFTATGTALLDLSIVGAAVGVAAHTARPVPLALWQFGLRR
                     GPLGYAIGMAFTVVLAFFIFEIAYVTILQPDNPQTIAEELGADRSTLLLVMGALVVIV
                     VAPVCEELFFRGFLFRVLRSNMPFLAAALIDGVLFGLVHGSFVILPVLAFLGVALCWL
                     YTRTGTLFAPIAVHALNNTIAYGAVTDNGWGVALPMGVAMIVACALVPALLPRRTPAP
                     V"
BASE COUNT          341 a          786 c          869 g          297 t
ORIGIN      
        1 acgctttcgc gcaacgcctt ctacgcgtac ttccgcgatc gccacgacct cgtcgcgcgg
       61 cttgtggagc gcctccgtgg cgaggccgac gcgacgatgg ccgactacgc gggcgctccg
      121 acgccgcctc ccggtgaggc cgggcgcgcg gcgctggccg ccgcggcgcg cctctacgcc
      181 cgccacggcg agttgctccg cgcgctccac gacgccgcgg cgcgcgacgc atccgcggcc
      241 cgcgcgtggg cggagttcgc ggagcggtcg gagcgcgccc tcaccgagcg ggtgcgcgag
      301 gagatgcgcg caggcacggt ggccggcatc gatcccgagc cgaccgtgcg ggcgctcgtc
      361 gcgatgaacc gcacgtgctt cttcgagcag atcgtcggca agcccgacgc cgacgtcgac
      421 gcgctcgtcg acgtcctaca cacgatctgg acccgcgccc tctacggggc accccgcgat
      481 cagccgtaga cgaagatccg gtcgcccagc gagatccagt tgtagatcga caccgcgttc
      541 gccagcggca cgcgcaggca tccgtgcgac gcgttgtagg tcggcaccgt gtggtacccg
      601 tggatcgcgt agccgcggat gaagtagctc gagtagtaca tcccgagcgc gttgtagccc
      661 ggacccttgc ggtagaagcg gtacgagccg cggaccgtcg gcgtcgcggg cgcgcccgag
      721 gaggtgtggt agacgcggaa cggcttgccg tcctgggcga gcaccagcac ctggcgcgag
      781 aggtccgcct cgacgtgctt tccggcattc gggtagcgca gcttgtaggc gccgcgcccg
      841 cggaagaccc ggtggaagat cgtccagttg gcgcgcgccg tccggctcat ccggttcacc
      901 ttgcggtagg cgagcacggc gcgtccggtc gcgtcgtcga agtggccgct cttcgggacg
      961 gcatagccga gcttcgcgag accgcgctgc agcagcagca ctcccggccc gctgcggccg
     1021 cggccggcgc gtggcgtgac ggcggtgaat ccgactggct tggactgccc ggcggcgacg
     1081 gcatccgact tgcgatgcac cgcgcggacg cgccagcggc gggcggtccg cggccgcacg
     1141 aacgcgtgga agcggcctcg cttgccgacc ttggcgcgga cacgctggcg ccgcttgtcg
     1201 ccgcgcagca gctcgatcgt cacggtctcg ccggccgccg cggggttcat ccgcccgttg
     1261 atgcgcaggc ggtcgcgcgg gaccgtgtag gcccgcccct tcatgtgcag ggcgcccgga
     1321 atcgtcacct cgatgttcgc cggcgccggc tcgggggccg gcggcggggg cggtggagcc
     1381 ggcggcggag gcggagccgg ctgggtcggc gtgggcgcct gagccatggc tcccggcgcg
     1441 acggccagca gggcaacgat gcagaggacg atgcgacgca aggcgagtgt tcctttcatg
     1501 cgacggggag ggtgcgaatc ctgcggccgg tggccagaat cctcgcatcg tggcggcgat
     1561 gcggtgaaga agagtgaacc atgcgccgtc acatacccgg cgcagcgggc cgcctagcct
     1621 cgtccgcgcg gctcataccg gggcgggagt gcggcgcggc agcagggccg ggacgagggc
     1681 gcaggcgacg atcatcgcga cgcccatcgg cagggcgacg ccccagccgt tgtcggtgac
     1741 cgcgccgtag gcgatcgtgt tgttgagcgc gtggacggcg atcggcgcga acagcgtgcc
     1801 ggtccgggtg tagagccagc agagcgccac ccctagaaag gccagcacgg gcaggatcac
     1861 gaacgacccg tgcaccagtc cgaacagcac gccgtcgatg agagcggccg cgaggaaggg
     1921 catgttcgag cgcaggacgc ggaagaggaa gccgcggaag aagagctcct cgcacacggg
     1981 cgcgacgacg atgacgacga gcgcgcccat cacgagcagc agcgtgctgc ggtcggcgcc
     2041 cagctcctcg gcgatcgtct gcgggttgtc gggctggagg atcgtgacgt aggcgatctc
     2101 gaagatgaag aacgcgagca cgaccgtgaa ggccatcccg atcgcgtagc cgagcggacc
     2161 gcggcgcagg ccgaactgcc acagggcgag cggcaccggc cgcgccgtgt gcgccgcgac
     2221 accgacggct gcgccgacga tgctcaggtc gagtagtgcc gtccccgtcg ccgtgaagcc
     2281 gggcgcgtcg ccg
//
LOCUS       DASSYW010000815         2160 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_99624, whole genome shotgun sequence.
ACCESSION   DASSYW010000815 DASSYW010000000
VERSION     DASSYW010000815.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2160)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2160)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2160
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_99624"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..562)
                     /locus_tag="VFN38_12995"
     CDS             complement(<1..562)
                     /locus_tag="VFN38_12995"
                     /inference="COORDINATES: protein motif:HMM:NF024589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HET9012732.1"
                     /translation="MLEHLREQLAHADAGTGRMVLVSGEAGVGKSRLVAEFAAEARSR
                     GACVLWAGSGAHTNRLPYGPFGVALESHAASCSDAERDALAERYPTLVPFVPSLGPGD
                     QRAGDAQLYLVPAIARLLIDLARAQTVVLVLGDLDGLHRSSLNLLEYLAPLAAERRWL
                     IVGTYRDEGVAPGSELRRMIAAAEWEG"
     gene            complement(496..1419)
                     /locus_tag="VFN38_13000"
     CDS             complement(496..1419)
                     /locus_tag="VFN38_13000"
                     /inference="COORDINATES: protein motif:HMM:NF015649.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BTAD domain-containing putative transcriptional
                     regulator"
                     /protein_id="HET9012733.1"
                     /translation="MTVPQRRVSAPLRPVIGADTRPAQLRLQLLGGFRAERVGVGWPV
                     SGWQRRSAKTLTKLLATCRGHKLHREQLLEILWPGVELDSALNSFAKALYAARRALEP
                     ELLPRESSAYLVVTDSMVALRTEHVWIDADQFEQLAESALLEEDIGALEAALAAYGGE
                     LLPEDRYADWCAQRRDYLADLHLRLLTGLADALAKRGSHSAAAARLREVLELDPTSED
                     VHRRLMRLYLSAGPATRPFASSTCVRKCSGASWTSSRRPKRRRSTTTSSPTEPRREPR
                     SRKRLSGGSRCWSTCANSSRTPTREPAEWSS"
     gene            complement(1447..>2160)
                     /locus_tag="VFN38_13005"
     CDS             complement(1447..>2160)
                     /locus_tag="VFN38_13005"
                     /inference="COORDINATES: protein motif:HMM:NF012464.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HET9012734.1"
                     /translation="PVTQSADRGQKPAGGRSGGGSLLPLLLLLAVPAALALTALRLGG
                     RTKAQPAGPPTAEPNAAPPAPHPPAARGPQPPAPAAASPEPTAIGYVRAVPGDRPELA
                     RHAGAIRRACTERGWRDTELVCDDEQATARRAFERPGLAAAMERLAGVGESRLVVSRL
                     GHLSRSQADLTALFEWFDRNGVQVIATDVGLDTTTSRGRAAAHSQLADFSRRQARAHA
                     NGRNGGTKKATADSNSVRA"
BASE COUNT          325 a          779 c          742 g          314 t
ORIGIN      
        1 ggccctccca ttcggcagcg gcgatcatcc gccgcagttc gcttcctggc gcgaccccct
       61 cgtcgcggta cgtcccgaca atgagccagc gacgctccgc agccagcggc gcgaggtact
      121 ccagcaagtt gaggctcgag cgatggagcc catccaggtc gcccaagacc aagacgactg
      181 tttgagctcg ggcgagatcg atcagcagcc tggcgatcgc cgggacgaga tagagctggg
      241 catcgccggc acgctgatca ccgggcccga gcgagggcac gaacggcacc agcgtcgggt
      301 aacgctccgc cagcgcatcg cgttcggcat ccgagcaact cgcggcatgg ctctccagcg
      361 cgacgccaaa ggggccgtac gggagccggt tcgtatgagc tccgcttccg gcccagagga
      421 cgcacgcgcc gcgacttcgc gcctcggctg cgaactctgc aaccagccgc gacttgccaa
      481 cgccggcctc gccgctcacg aggaccattc ggccggttcc cgcgtcggcg tgcgcgagct
      541 gttcgcgcag gtgctccagc atcgactccc gcccgacaaa cgtttcctgg accggggttc
      601 ccgtcggggt tccgtcggcg acgatgtcgt cgtagagcgt ctgcgtttcg ggcgccggga
      661 cgaggtccag ctcgcgcctg agcacttcct gacacaggtg gaactggcga acggcctggt
      721 cgcgggccct gccgacagat acaggcgcat caggcggcga tggacgtctt cactcgtcgg
      781 gtcgagttcg agcacctcac ggaggcgagc tgcggccgcg ctgtgggacc cccgcttcgc
      841 cagcgcgtcc gccaagccgg tcagcaaacg caggtgcagg tccgcaaggt agtcgcgacg
      901 ctgggcacac cagtccgcat agcgatcctc tgggaggagc tcgccgccgt acgccgcgag
      961 ggcggcctcc aacgcgccga tgtcctcctc cagcaacgcg ctctctgcga gctgctcgaa
     1021 ctggtcggca tcgatccaga cgtgctcggt gcgaagcgcg accatcgagt ccgtcacgac
     1081 caggtaggcg gagctctccc ggggcagcag ctccggctcg agcgcacgac gagcggcata
     1141 gagcgccttt gcgaacgagt tgagcgccga gtcgagctcg acgcccggcc acaggatctc
     1201 gaggagctgc tcgcggtgca acttgtgacc gcgacaggtc gcaaggagtt tcgtgagcgt
     1261 ctttgcgctg cgccgctgcc acccggacac cggccagccg actccgacgc gctcagcgcg
     1321 gaagccgcca agaagttgca ggcgcagctg cgcgggtcgc gtatccgcgc cgatgacggg
     1381 ccgcagcggc gcggaaactc gccgctgcgg caccgtcatg cgcagagccg cttgccccgc
     1441 catcgctcaa gcccgcactg agttgctgtc ggccgtggcc ttcttggtcc ccccattacg
     1501 gccgttcgcg tgcgcccgag cctgtcgacg ggagaagtcg gctagctgcg agtgggccgc
     1561 tgctcgtccg cgcgacgtcg tcgtgtcgag tccgacgtcg gtcgcaatca cttggacgcc
     1621 gtttctgtcg aaccactcga acaacgccgt caggtccgcc tgcgagcgcg agagatgtcc
     1681 aagcctgctg acaaccagac gcgactcgcc cactcccgcg aggcgctcca tcgcggccgc
     1741 aagccccggc cgctcgaacg ctcggcgcgc ggtggcctgt tcgtcgtcgc agacgagctc
     1801 cgtgtccctc cagccgcgct ccgtgcaagc tcgtctgatc gcacctgcgt gacgggcgag
     1861 ctcggggcgg tcaccgggaa cggcgcggac gtagccgatc gcggtcggct ctgggctggc
     1921 ggccgcgggc gccggaggct gcgggccgcg cgccgccggc gggtggggcg ccggcggcgc
     1981 tgcgttgggc tcggccgtag gtggcccagc cggttgcgcc ttcgtccgcc ctccaaggcg
     2041 aagcgcagtc aacgccagcg ccgccggcac ggcgagcaac agcagcagcg gcaggaggga
     2101 cccacccccg ctacgcccgc cggccggctt ctggccccgg tccgctgatt gcgtgacggg
//
LOCUS       DASSYW010000816         3076 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_25798, whole genome shotgun sequence.
ACCESSION   DASSYW010000816 DASSYW010000000
VERSION     DASSYW010000816.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3076)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3076)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3076
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_25798"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..964
                     /locus_tag="VFN38_13010"
     CDS             <1..964
                     /locus_tag="VFN38_13010"
                     /inference="COORDINATES: protein motif:HMM:NF014273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ParB N-terminal domain-containing protein"
                     /protein_id="HET9012735.1"
                     /translation="YAAPRMAKKKKAVRRKKKEAASVGLSVAETRAGTSVTDALAALV
                     DRDGGAVLGAYRDPFGGKPVLIVSLPIEKVEPTPFQRDPSDPHVKRLMTVIETLDRFL
                     DPIIVIRRDDRYWTPNGNHRLQAMKRLGAKAVVALLIPEAEVAYQILALNTEKAHNLR
                     EKSLETIRMERALADDSRESEEAFAFQFEMPSYLTLGAAYESRPRLSGAVYQSVLRRI
                     DDFLDTPLLKALKERERRAGLVLAIDDRVTAIVEKLKARGLTSPYLRPFVVARLNPIR
                     FSKATSFDFDEVLEKMAASAGKFNIDKVKAEEVTRASGPPGDDD"
     gene            1042..>3076
                     /locus_tag="VFN38_13015"
     CDS             1042..>3076
                     /locus_tag="VFN38_13015"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HET9012736.1"
                     /translation="MPWSVEAGFLVVVASVLAFATWAAHQRLRRSEAAREDLERSFKV
                     IEQERHVLELIANGATLKEVLERLTLAVESIVPEATCSVLLVDRERNCLRQGAAPHLP
                     APYWAACEGLPIADFGCCPSAVFHNRISVSEDLLVDPKWASARDAVRQLGLRSCWSVP
                     IQDSHTGDVIGTFAMYRAVPASPTPEDLRVVSAAARLAGNAIERLRWAQRAREFEERF
                     ALAERAAGFGIWEWDPQTNVFDLSEGTARAMGGELKAGRISTEELYASVHPDDRTAAH
                     GARDAALAHGGGYEQEFRRISPVDGAVRWFRNSAKVEMAEGKAVKVTGAVMDITRQKE
                     LMLSLEQAKVMAEAGAQAKSEFLANMSHEIRTPMNGVIGMTGLLLETELTSEQRDFVE
                     TIRGSGEALLTIINDILDFSKIEAGKLALASYPFELDRLLEEVVEMLAPSACEKGIDL
                     VLNYPPANPRRFQGDADRVRQLVVNLAANAVKFTHEGQVVISVEPAASAAAGVRISIA
                     DTGIGIASGQLASLFEKFTQADPSTTRRYGGTGLGLSITRSLVELMGGQISAESAVGA
                     GSTFTVSLPLPLSHEPVDGPAVPSTLQGLRVLIVDDNRVNRRVIHQHICSWGMRNGSF
                     ASAEEALAAVREAREAGDPYQIVIADYHMPGIDGVMLAQQLRALPERLVYVLLT"
BASE COUNT          511 a          990 c         1088 g          487 t
ORIGIN      
        1 gtatgctgct ccgcgaatgg ccaagaagaa gaaagccgtc cgccgaaaga agaaggaagc
       61 cgcgtcggtc ggcctgtcgg tcgcggaaac gcgcgcgggc accagcgtca ccgacgcgct
      121 ggccgcgctg gtcgatcgcg acggcggcgc cgtgctcggc gcctatcggg atccgttcgg
      181 cggcaagccc gtgctgatcg tctcgctgcc gatcgagaag gtcgagccca ccccgtttca
      241 gcgcgatccc tccgatccgc acgtgaaacg gctgatgacc gtgatcgaga cgctggaccg
      301 cttcctcgac ccgatcatcg tcatccgccg cgacgaccgc tactggacgc ccaacggcaa
      361 ccaccggctg caggccatga agcggctggg cgcgaaggcc gtcgtggcgc tgctcatccc
      421 ggaggcggaa gtcgcgtatc agatcctggc gctgaatacc gagaaggcgc acaacctgcg
      481 ggagaagtcg ctcgagacga tccggatgga gcgcgcgctc gccgacgact cgcgcgagag
      541 cgaggaggcg ttcgcgttcc agttcgagat gccgtcgtac ctcaccctcg gcgcggcgta
      601 cgagtcgcgg ccgcgtttga gcggcgccgt ctatcagtcg gtgctccgcc gcatcgacga
      661 ctttctcgac acgccgctgc tgaaggcgct caaggagcgc gagcggcggg ccgggctggt
      721 gctggcgatc gacgaccgcg tgacggccat cgtggagaag ctgaaggccc gcggcctgac
      781 gagcccgtac ctgcgaccgt tcgtggtggc tcgcctcaac ccgatccggt tctcgaaggc
      841 gaccagcttc gacttcgacg aggtgctgga gaagatggcg gcctcggccg gcaagttcaa
      901 catcgacaag gtgaaagcgg aagaagtgac gcgagcctcg gggccgcctg gggacgacga
      961 ttaaggcctc tcgcctctag cctttggcct ctagggccag aggctaaagg ccgaaggctg
     1021 gaggccgatt tttttggcga tatgccgtgg agtgtcgaag cggggttcct ggtcgtggtc
     1081 gccagcgtcc tggcgtttgc cacctgggcg gctcatcaac gattgaggcg ctcggaggcg
     1141 gcgcgggagg atctcgaacg gtcgttcaag gtgatcgagc aggagcgcca cgtgctcgag
     1201 ctcatcgcca acggcgccac gttgaaggaa gtgctcgagc gcttgacgct cgctgtggag
     1261 tcgatcgttc ccgaagccac gtgctcggtg ctgctggtcg atcgtgagcg caactgcctg
     1321 cggcagggcg ccgcgccgca cctgcccgcg ccgtactggg ccgcgtgcga agggctcccg
     1381 atcgccgact tcggctgctg cccctcggcc gtgttccaca acaggatttc cgtcagcgag
     1441 gatctgctgg tcgatccgaa gtgggcatcg gctcgcgacg ccgtgcggca gcttggcctt
     1501 cgctcgtgct ggtcggtgcc gattcaggat tcgcacacgg gcgacgtcat cggcaccttc
     1561 gcgatgtacc gcgcggtgcc ggccagcccg acccccgagg atctgcgcgt cgtgagtgct
     1621 gccgcccgcc tggccggtaa tgcgatcgaa cggctgcggt gggcgcagcg cgcccgtgag
     1681 ttcgaggagc gattcgcgct ggcggagcgc gccgccggct tcggcatctg ggagtgggat
     1741 ccgcaaacca acgtgttcga cctgtctgaa ggtacggccc gggcgatggg tggcgagctc
     1801 aaggccggac gcatcagtac cgaggagctg tatgcgtcgg tgcacccgga cgatcgcacg
     1861 gcggcgcacg gtgcccgcga cgccgcgctc gcgcacggcg ggggctacga gcaggaattc
     1921 cggcgcatct ctccggtgga cggggccgtt cgctggttcc gcaacagcgc caaagtggag
     1981 atggccgagg gcaaggccgt caaggtgacg ggcgccgtca tggacatcac ccgccagaaa
     2041 gagctgatgc tcagcctgga acaggccaag gtgatggcgg aggcgggcgc gcaggccaag
     2101 agcgagttcc tggccaacat gagccacgag atccgcacgc caatgaacgg cgtgatcggc
     2161 atgaccgggc tcctgctcga aaccgagctt acgtcagagc agcgcgactt tgtggagacg
     2221 attcgcggct ccggcgaggc gctgctgacg atcatcaacg acatcctcga cttctcgaag
     2281 atcgaggcgg gcaagctggc gctcgcaagc tacccgttcg agctcgatcg cctgctcgag
     2341 gaagtggtgg agatgctggc gccgagcgcc tgcgagaagg gcatcgacct ggtgctcaac
     2401 tatccgccgg cgaacccgcg ccggttccag ggtgacgcgg accgcgtgcg tcagctcgtg
     2461 gtgaacctgg cggccaacgc cgtgaagttc acgcacgagg ggcaagtggt gatctcggtg
     2521 gagccggccg ccagtgcggc ggccggcgtc cgcatcagca ttgccgacac cgggatcggg
     2581 atcgcgtccg gccagctggc ctcgctcttc gagaaattca cgcaggccga cccgtccacc
     2641 acgcgccgct acggcggcac gggcctcggc ttgtcgatca ccaggagcct cgtggagctg
     2701 atgggcgggc agatcagcgc cgagagcgcg gtgggcgccg ggtccacctt caccgtctcg
     2761 ctgccgctgc cgttgagcca cgagccggtc gacggacccg cggtaccgtc cacgctgcag
     2821 gggctccgcg tgctgatcgt ggacgacaac cgcgtgaacc gccgcgtcat ccatcagcac
     2881 atttgcagct ggggcatgcg caacggcagc tttgcgtcgg ccgaggaagc gctggccgcc
     2941 gtgcgcgagg cgcgcgaagc gggcgatccg taccagatcg tcattgccga ctaccacatg
     3001 ccggggatcg acggcgtgat gctcgcgcag cagttgcgtg cgttgccgga gcgtctcgtc
     3061 tacgtgctgc tgacgt
//
LOCUS       DASSYW010000817         3412 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_480672, whole genome shotgun sequence.
ACCESSION   DASSYW010000817 DASSYW010000000
VERSION     DASSYW010000817.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3412)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3412)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3412
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_480672"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            393..1448
                     /locus_tag="VFN38_13020"
     CDS             393..1448
                     /locus_tag="VFN38_13020"
                     /inference="COORDINATES: protein motif:HMM:NF024743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4097 family beta strand repeat-containing
                     protein"
                     /protein_id="HET9012737.1"
                     /translation="MPSPLRRGAAFLALAIPALAHAQTERFTLDGAEVAVYNLVGTLK
                     VEGGAGDKVVVEVTRAGRDAQRLGVLTGDVRGRPAIRIRYPEDRIVYPQLRYDSRSTF
                     TVGDDGTFGDDDRRGWRDGRRVEVRSGGDGMEAHADVRVVVPKGKALFVRHGVGETTI
                     ENVDGRLNVSVAASRVRASHVRGVLTLDTGSGGVEVSDMTGDLNLDAGSGGATLDGVR
                     GGKLNMDIGSGSLRGRAIEVSELVADVGSGGIRLSGVKTPRLHLETGSGGSDVELLGP
                     VEDVQVEAGSGGVTLRLPANLGATVDIQTGSGGIDSDFDVKVQRMERHALRGTVGDGR
                     GRVRIEAGSGTVRLLKS"
     gene            complement(1451..2752)
                     /locus_tag="VFN38_13025"
     CDS             complement(1451..2752)
                     /locus_tag="VFN38_13025"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HET9012738.1"
                     /translation="MIPDTRVLVLDADEARAKSLVELLAPAGFAASWHRLDAAPAIVP
                     DVALLSVNTVEPGAIARMAARLPDAEVVVLAERRAQPATHEVMGAGASDVVERAAGAD
                     VLLAAVERAALAGRTRRELAALRARLGDEARQALVGQSAAMVLVRELVGRAAGSRRTV
                     LVTGEAGTGKSTVARLVHELSDRAARPFVVARCDGTDAAALEAALFGAGRDGLLETAR
                     GGTLVLEEAGALPRALWARLASAIAEGAVRRDGLAEPTAVDVRLVLTVCGSEQDSTAH
                     VDGLLDDRQVLPISLAPLRERRRDIPLLVQHFRERAAQGGAAVQPLPSESMTPLLAHQ
                     WPGNVRELEHWVERISLAASGEERTTQRRTIVGPGAEFAAIDAAHLTLEALERRYILH
                     VLAQENGHQSRAADRLGIDRRTLYRKLKEYRDDGVRLSATG"
     gene            complement(2839..>3412)
                     /gene="uppS"
                     /locus_tag="VFN38_13030"
     CDS             complement(2839..>3412)
                     /gene="uppS"
                     /locus_tag="VFN38_13030"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="polyprenyl diphosphate synthase"
                     /protein_id="HET9012739.1"
                     /translation="REGVGTLTLYAFSSDNWKRPGAEVTALMRLFRRALLGEAKRCLE
                     NGVRLTILGRRDRLPPSLRHTVEQVEALTSGGDRMHLRVAVDYSSRDAVLRAAAAMPG
                     DAMTREGFSALLARVDHDRLPARDVDLVVRTGGEQRLSDFLLWECAYAELLFVKKMWP
                     EFTADDLAEALEDFRSRNRRFGLAPEQVAS"
BASE COUNT          488 a         1234 c         1242 g          448 t
ORIGIN      
        1 ggcacgacga tggaggcggc actcaccgcg tactgcttgc ggtagcgcgc ctccgagaac
       61 ccgtacacgg ccgccgccgc gatcagtatc agggccgccg cgccggccac cacggtgccc
      121 agcgccttca ggagctttct catgggagtt cgtcatcctc gggccggcgt cggcccatgg
      181 gggtgtacga atggcgcgtc ggcaatcgcg cccgggaggg tgcgcaatac tgcccgacca
      241 gatccgcgcc gtccagtgcg catcgaacct tccgtgcgcg ccgccccgta cgggccctcg
      301 ggatcgcggg attcaaacct cccgcccacc cccggtgtcc caccgctgca cgcgccgacc
      361 ggcgcattcg caccacagcc gaggatccca ccatgccctc accactccgt cgcggcgccg
      421 cgttcctggc actcgcgatt cccgccctcg cccacgcgca gaccgaacgg ttcacgctcg
      481 atggcgcgga ggtggccgtc tacaacctcg tcggtacgct gaaggtggaa gggggcgccg
      541 gcgacaaggt cgtcgtcgag gtcacgcgcg ccgggcgcga cgcccagcgg ctgggggtgc
      601 tcaccggcga cgtccgcggc cgtccggcga tccgcatccg gtacccggag gatcgcatcg
      661 tctatcccca gctgcgctac gacagtcgct cgacgttcac cgtcggcgac gacggcacct
      721 tcggcgacga cgaccggcgc gggtggcgcg acgggcgccg cgtggaggtg cgcagcggcg
      781 gcgacggcat ggaggcgcac gcggacgtgc gcgtggtggt gccgaagggg aaggcgctct
      841 tcgtccgcca tggcgtgggc gagacgacga tcgagaatgt cgatggccgg ctcaacgtga
      901 gcgtcgcggc gtcacgcgtg cgcgcgtcgc acgtgcgagg cgtgctgacg ctcgacacgg
      961 ggtcgggcgg cgtggaagtc tccgacatga ccggagacct gaacctcgac gccggctccg
     1021 gcggcgccac gctcgatggc gtgcgcggcg ggaagctcaa catggacatc ggctccggat
     1081 cgctgcgcgg ccgcgcgatc gaggtgtccg agctggtggc cgacgtgggt tccggcggga
     1141 tccgcctctc gggagtgaag acgccgcggc tgcatctgga gacggggagc ggcggcagcg
     1201 acgtggagct gctcggtccc gtggaagacg tgcaggtgga agccggctcc gggggagtca
     1261 cccttcgcct gccggcgaac ctgggcgcca cggtcgacat ccagaccggc agtggcggca
     1321 tcgactccga cttcgatgtg aaggtgcagc gcatggagcg gcacgcgctg cgcggcacgg
     1381 tgggggacgg gcgcggacgc gtacggatcg aggctggctc cggcaccgtg cgactgctga
     1441 agagctgacg tcagcccgtc gcggacaacc gcaccccgtc gtcgcgatac tccttgagct
     1501 tgcggtacag cgttcgccga tcgatgccca gtcggtcggc ggcgcggctt tggtgcccgt
     1561 tctcctgcgc gagcacgtgc aggatgtacc gccgctcgag cgcctccagc gtcaggtgcg
     1621 ccgcgtcgat ggccgcgaac tcggcgccgg gacccacgat cgtgcgccgc tgtgtcgtac
     1681 gctcctcgcc actggccgcg agcgagatgc gctccaccca gtgttccagc tcgcgcacgt
     1741 tgcccggcca ctggtgcgcg agcagcggcg tcatcgactc gctcggaagc ggttgaacgg
     1801 ctgctcctcc ctgcgcggcg cgctcgcgga agtgctgcac cagcaggggg atgtcgcgcc
     1861 gccgctcgcg gagcggcgcg agactgatcg gcagcacctg ccggtcgtcg agcagcccgt
     1921 cgacgtgcgc cgtggagtcc tgctccgatc cgcacacggt gaggacgagc cggacgtcga
     1981 ccgccgtcgg ttccgcgagc ccgtcgcgcc gcacggcacc ctcggcgatc gccgaggcga
     2041 ggcgcgccca cagcgcacga ggcagcgcgc ccgcttcctc cagcacgagc gtgccgccac
     2101 gcgcggtctc cagcagcccg tcgcgaccgg cgccgaacaa cgccgcctcg agcgcggcgg
     2161 catccgtccc gtcgcagcgg gcgacgacga acgggcgtgc cgcgcggtcg gacagctcgt
     2221 gcacgaggcg cgcaacggtg ctcttgccgg tgcctgcttc gccggtcacg agcacggtcc
     2281 gccgcgagcc ggcggcgcgc cccaccagct cgcgcacgag caccatggcg gccgactggc
     2341 ccacgagggc ctggcgtgcc tcgtcgccga gacgggcacg cagcgcggcg agctcgcgtc
     2401 gggtgcggcc ggccagtgcc gcgcgctcga ccgcggcgag cagcacgtcg gcccccgcgg
     2461 cacgctccac cacgtcgctc gcccccgcgc ccatcacctc gtgcgtcgcc ggctgcgcgc
     2521 ggcgctccgc gagcaccacg acctcggcgt cgggcaaccg cgccgccatg cgcgcgatcg
     2581 ctccgggctc gacggtgttc accgagagca gcgcgacgtc gggtacgatg gctggcgccg
     2641 cgtccagtcg atgccacgag gccgcgaagc cggcgggagc gagcagctcg acgagcgact
     2701 tggcgcgtgc ctcatcggcg tccaggacga gcacgcgcgt atcggggatc atgcggattg
     2761 gcgagtgaag ggtctcgcca acaggtatcg gccggcgcgc gccggatgtt caggcgcgcg
     2821 agccagatta cgcccccgtc aggacgcgac ctgttcgggc gccagcccga accgccggtt
     2881 gcggctgcgg aagtcctcga gcgcctcagc cagatcgtcg gcagtgaact cgggccacat
     2941 cttcttcacg aacagcagct cggcgtacgc gcattcccag agcaggaagt cgctgagccg
     3001 ctgctcgccg cctgtgcgta cgacgaggtc cacgtcacgg gccggcaggc ggtcgtgatc
     3061 cacgcgggcc agcagcgccg aaaagccctc gcgcgtcatc gcgtcgccgg gcatcgcggc
     3121 cgcggcgcgc agcacggcat cgcgcgacga gtagtccacc gcgacgcgca ggtgcatgcg
     3181 gtcgcctccc gaggtgaggg cttccacctg ctccaccgta tgccgcagcg aaggcggaag
     3241 gcggtcgcga cggccgagga tggtgaggcg gacaccgttc tcgagacagc gcttggcctc
     3301 gccgagcagc gcgcggcgga agaggcgcat cagcgcggtg acctcggcgc cgggacgctt
     3361 ccagttgtcg gaggagaagg cgtagagcgt cagcgtgccg acaccctcgc gc
//
LOCUS       DASSYW010000818         3235 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_302307, whole genome shotgun sequence.
ACCESSION   DASSYW010000818 DASSYW010000000
VERSION     DASSYW010000818.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3235)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3235)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3235
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_302307"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(106..738)
                     /gene="pilO"
                     /locus_tag="VFN38_13035"
     CDS             complement(106..738)
                     /gene="pilO"
                     /locus_tag="VFN38_13035"
                     /inference="COORDINATES: protein motif:HMM:NF016253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0043107 - type IV pilus-dependent motility
                     [Evidence IEA];
                     GO_process: GO:0043683 - type IV pilus assembly [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type 4a pilus biogenesis protein PilO"
                     /protein_id="HET9012740.1"
                     /translation="MALLPQNKRDQYMLYLIGISLLAAYGFQDQLWKPKNEELNATQA
                     HIDSLVIVNQRAKAELAQGKTQELKAEAERFGNDLEVMRRLVPTGNEVPALLEQVSTA
                     ARRVGLDIADVTPLPLLSGDQYDAYKYRLSMRGDFHQIGTLLTNIGSLQRIVAPINLT
                     LAPVGGPAGAVKRGRMQPVEARFEIQTYVARNVPTPVVRVAGAGEPGGRK"
     gene            complement(742..1509)
                     /locus_tag="VFN38_13040"
     CDS             complement(742..1509)
                     /locus_tag="VFN38_13040"
                     /inference="COORDINATES: protein motif:HMM:NF016992.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilN domain-containing protein"
                     /protein_id="HET9012741.1"
                     /translation="MIEINLLPGTKKKGRKSGGGGGGGMSAPSIDVAAWFASVRQRIR
                     EPWLIAGVSISLLTVAVIGLLYVRQAAREEAVAESLQKAVQDSTRFASVLKEREMAEA
                     KRDTVLRSLNLIRAIDDDRFVWPHVMDEVSRALPPYTWIVSLGFMGAGQGQQAVTTVA
                     AAPAAEPGKRHRAVQTAIPRDSVHIRVVGNTVDIQALTRFMTQLEASPFLAQVQLAKS
                     ERAMDNGKEVTQFQLDMNYSRPDPALVRRVPLAVSVR"
     gene            complement(1523..2563)
                     /gene="pilM"
                     /locus_tag="VFN38_13045"
     CDS             complement(1523..2563)
                     /gene="pilM"
                     /locus_tag="VFN38_13045"
                     /inference="COORDINATES: protein motif:HMM:TIGR01175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009297 - pilus assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus assembly protein PilM"
                     /protein_id="HET9012742.1"
                     /translation="MFGRSKTTVGLDIGSGLIKVAVIDHSKKEPELVKVAVVPLLADA
                     IVEGEVMDPGIVSEAIQSALAEANASKIKSVVTAVGGRDVIIKKIQIERVREAQAREL
                     MRWEAEQHVPFDMESVELDFQILDPDADGVEMSVLLVAAKRELIESKMRMLTDAGIEG
                     GVVDVDAFALHNAFERNHPNAKDGIVALVNMGHEVTNINILENGIPILTRDIALGTRR
                     FREDLQRERGLGADDAQALLQGYDRSAHLDAVLESRGEEIAVGIERAAAFLASSSRSG
                     GQVRSVFTCGGGSRIPGLTSVLADRLRLQVQQANPLANLRIRDGAMDSLVTDEVAPLL
                     MLPIGLALRKRS"
     gene            complement(2914..>3235)
                     /locus_tag="VFN38_13050"
     CDS             complement(2914..>3235)
                     /locus_tag="VFN38_13050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012743.1"
                     /translation="GRRALGEILQRWDARADSLPVGGAMDRVVPAPSPAGPPVVVAAR
                     LRRLTARLYAATVTVAVDGGEGDAGVAVRRLRLLLERAPDSLAGGDAPAVVPLARWSV
                     VDRR"
BASE COUNT          468 a         1157 c         1119 g          491 t
ORIGIN      
        1 gctgcgccgc ctgctttggc gcggcgacgt tcgggatccc ctgtgcctcc gcggcggagg
       61 ccgcggcgac gagggcgatc acgagcgtgg acagctgatg gcgtctcact tcctgcctcc
      121 cggctcaccg gcgcccgcga cccgcaccac cggcgtgggc acgttgcggg cgacgtacgt
      181 ctggatctcg aagcgcgcct cgaccggctg catccgcccg cgcttcaccg cgccggccgg
      241 accgcccacg ggcgcgagcg tcaggttgat gggcgccacg atgcgctgga gcgacccgat
      301 gttcgtgagc agcgtgccga tctggtggaa gtcgccccgc atgctgaggc ggtacttgta
      361 ggcgtcgtac tggtcgccgg agagcagcgg cagcggcgtg acgtcggcga tgtcgaggcc
      421 gacgcggcgc gccgcggtgg acacctgctc cagcagcgcc ggcacctcgt tgcccgtggg
      481 cacgagccgc cgcatcactt ccaggtcgtt gccgaaccgc tcggcctcgg ccttgagctc
      541 ctgggtcttc ccctgggcga gctccgcctt ggcgcgctgg ttcacgatga cgagcgagtc
      601 gatgtgcgcc tgggtggcgt tcagctcctc gttcttcggc ttccagagct ggtcctggaa
      661 cccgtacgcc gccagcagcg agatgccgat caggtacagc atgtactgat cgcgcttgtt
      721 ctgtggtagg agcgccatct gctacctcac cgagacggcc agcgggacgc ggcgaacgag
      781 cgccggatcc gggcgtgaat agttcatgtc cagctggaac tgggtgactt ccttgccgtt
      841 gtccatcgcg cgctcggact tggccagctg gacctgcgcc aggaagggcg aggcctcgag
      901 ctgcgtcatg aagcgggtga gggcctggat gtccaccgtg ttgccgacga cgcggatgtg
      961 cacggagtcg cgcgggatgg ccgtctgcac ggcgcggtgg cgcttgcccg gctcggcggc
     1021 cggcgcggcc gccaccgtgg tcaccgcctg ctggccctgg ccggcgccca tgaacccgag
     1081 cgacacgatc caggtgtacg gcggcagcgc gcggctcacc tcgtccatca cgtgcggcca
     1141 cacgaagcgg tcgtcgtcga tggcgcgaat gaggttgagc gagcgcagca cggtgtcgcg
     1201 cttcgcctcc gccatctcgc gctccttgag caccgacgcg aagcgcgtgg agtcctgcac
     1261 cgccttctgg agcgactcgg cgaccgcctc ctcgcgcgcc gcctggcgca cgtagagcag
     1321 gccgatgacc gccaccgtga gcagggagat gctcacgccg gcgatgagcc acggctcgcg
     1381 gatgcgctgg cgcaccgacg cgaaccaggc ggccacgtcg atggacggcg ccgacatgcc
     1441 gcctccaccg ccgccaccgc tcttgcggcc cttcttcttc gtgcccggaa gcagattgat
     1501 ctcgatcatt cgacgtctcg gctcatgatc tcttgcgcaa cgccaacccg atgggaagca
     1561 tcaggagcgg tgcgacctca tcggtgacga gactgtccat cgccccgtca cggattcgca
     1621 ggttggccag cggattggcc tgctgcacct ggaggcgcaa ccggtcggcg aggacactgg
     1681 tgagccccgg gatccgggac ccgccaccac aggtgaacac cgaccgcacc tgcccgccgc
     1741 tgcgcgacga ggaggcgagg aaggcggcgg cgcgctcgat gccgacggcg atctcctcgc
     1801 cgcggctttc cagcacggcg tcgaggtgcg cgctgcggtc gtagccctgg aggagcgcct
     1861 gcgcgtcgtc ggccccgagg ccgcgctcgc gctggagatc ctcccggaac cgccgcgtgc
     1921 cgagcgcgat gtcgcgcgtc aggatcggga tgccgttctc gagaatgttg atgttggtga
     1981 cctcgtggcc catgttcacg agcgccacga tgccgtcctt cgcgttggga tggttccgct
     2041 cgaacgcgtt gtgcagcgcg aacgcgtcca cgtccaccac gccgccctcg atgccggcgt
     2101 cggtgagcat gcgcatcttg gactcgatca gctcgcgctt cgcggcgacg aggagcacgc
     2161 tcatctccac gccgtcggcg tcgggatcga ggatctggaa gtccagctcc accgactcca
     2221 tgtcgaacgg cacgtgctgc tccgcctccc accgcatcag ctcgcgcgcc tgggcttccc
     2281 tgacgcgctc gatctggatc ttcttgatga tgacgtcgcg cccgccgacg gcggtgacga
     2341 cgctcttgat cttcgacgcg ttcgcctcgg cgagcgccga ctggatcgcc tcggagacga
     2401 tgcccgggtc catcacctcg ccttcgacga tggcgtcggc gaggagcggg acgacggcga
     2461 ccttgaccag ctccggttcc ttcttggagt gatcgatcac cgcgaccttg atcagtccgg
     2521 acccgatgtc cagaccgacg gtggttttcg aacgaccgaa caaggccagg gggaaattcg
     2581 gagagcgaga caccaccccg ggagggaact tcagggggcg gcggtgcgtg agacggcggg
     2641 agccggcgtg cggcgacgat gaattcgtcc cgcgcaccga cactttcgaa gctgcgacag
     2701 gcgaggcggc ggatgcggcg gcctcgcttg cacttgcgag tcggctcgac atgcggcgaa
     2761 tcgagcccga tcagacatcg tgaccggcgt cggtcactaa caccgaaaac acgaccgaca
     2821 ggcccgatgg taacaaggcc cggcgcggcg gtgtgcgccc ggtcacggcg gtggcggatc
     2881 accgtcccct gcaccgtcgc ccccgcgcgc cgctcagcgg cggtccacca cgctccagcg
     2941 cgcgagcggc accaccgccg gcgcgtcgcc cccggccagg ctgtccggcg cgcgctcgag
     3001 cagcaggcgc aggcgccgca ccgccacgcc ggcgtctccc tccccgccat cgacggccac
     3061 cgtcaccgtg gcggcgtaca gccgcgccgt cagccggcgg aggcgcgccg ccacgaccac
     3121 cggcgggccg gcgggcgacg gcgccggaac gacgcggtcc atggccccgc ccaccggcag
     3181 cgagtcggcg cgcgcatccc accgctgcag gatctcgccg agcgcgcgcc ggccc
//
LOCUS       DASSYW010000819         2029 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_560275, whole genome shotgun sequence.
ACCESSION   DASSYW010000819 DASSYW010000000
VERSION     DASSYW010000819.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2029
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_560275"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            11..>2029
                     /locus_tag="VFN38_13055"
     CDS             11..>2029
                     /locus_tag="VFN38_13055"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HET9012744.1"
                     /translation="MLAHSNLLHNSAVIHRVSKHRPGDNGVFWLPPFHDMGLIGGILQ
                     PIYAGLSAALMAPATFLQRPLRWLEAMSRYQATTSGAPNFAYDLCVERIADAERASLD
                     LSHWRTSFNGAEPIRADTIERFTQAFAASGLRRDVILPCYGLAEGTLLVSGGPAERPA
                     LVVHADRRSLESGELRAPDERGHTPIALVASGEPVAEQTVAIVDPDTGARCGDGQVGE
                     IWVAGASVAAGYWGRPEASAATFQARLSGSDQAFLRTGDLGVFVRGQLIVTGRLKDLV
                     IIDGRNYYPHDIELAAERSHAALRAGYTAAFGVAGEGGAGGRERLVLVAEVVRQHKTE
                     ADSALFQAIRTELAGTIGVVPDEIVLIRQNTIPRTSSGKIQRRACRVAYLGGSLEVAG
                     RWKARGSDVVPPNDAITAFVIDWVREELQVDPARLDPRTKLRELGLDSLAATRLMVAL
                     EGRFGRRIDPAQLWEQPDIGSLARHLASLDARGTPASSARVPERPHYGPPTAASTDVA
                     QWVEYRALRGRLDTLAEHGIASPFFHVHDGVTGSEAVVDGRTLVNFANYNYLGLSGDA
                     DVTRAAQDAVARWGSSVSASRVVSGERPVHRELEQEIARFVGTDDAIVYIGGVPANVS
                     TISHLLGAEDVVLCDQLVHNSAMQGAEFSGARRLVFPHNDWAALDAMLT"
BASE COUNT          268 a          733 c          756 g          272 t
ORIGIN      
        1 gcgcggcgtc atgctggctc actcgaacct cctgcacaac tcggccgtca tccaccgcgt
       61 gtccaagcac cggccgggcg acaacggagt gttctggcta ccccccttcc acgacatggg
      121 gttgatcggc ggcatcctcc agccgatcta cgccggcctc tcggcggcgc tgatggcgcc
      181 cgccaccttc ctgcagcggc cgctgcgctg gctcgaggcg atgtcgcgct accaggcgac
      241 gacgagcggg gcgccgaact tcgcctacga cctctgcgtc gagcggatcg ccgacgccga
      301 gcgcgcctcg ctcgacctct cgcactggcg cacctcgttc aacggcgccg agcccattcg
      361 cgccgacacg atcgagcggt tcacccaggc gttcgcggcc agcgggctgc ggcgcgacgt
      421 gatcctcccc tgctacggcc tggccgaagg gacgctgctg gtgtcgggcg gacccgccga
      481 gcgccccgcg ctcgtggtgc acgccgaccg gcgcagcctc gagtcgggcg agctgcgcgc
      541 gccggacgag cgcggccaca cgcccatcgc gctggtcgcc tccggcgagc cggtggcgga
      601 gcagaccgtc gcgatcgtcg atcccgacac cggcgcgcgt tgcggcgatg gccaggtcgg
      661 cgagatctgg gtggccggcg cgagcgtcgc cgccggctac tggggccggc ccgaggcgag
      721 cgccgccacc ttccaggcgc ggctctcggg ctccgaccag gcgttcctgc gcaccggcga
      781 cctcggcgtg ttcgtgcggg ggcagctcat cgtcaccggg cggctgaagg acctcgtcat
      841 catcgacggg cgcaactact acccgcacga catcgagctg gcggcggagc ggagccacgc
      901 cgccctccgc gccggataca cggcggcgtt cggcgtggcg ggcgagggag gggcaggggg
      961 acgcgagcgg ctcgtcctcg tggcggaggt cgtccgccag cacaagacgg aggccgacag
     1021 cgcgctgttc caggcgatcc gcaccgagct ggccgggacg atcggcgtgg tgcccgacga
     1081 gatcgtcctc atccggcaga acacgattcc gcgcacgtcg agcgggaaga tccagcgccg
     1141 tgcctgccgc gtggcgtacc tcggcggctc gctcgaggtg gcaggccggt ggaaggcgcg
     1201 cggcagcgac gtggtgcccc cgaacgacgc gatcaccgcc ttcgtcatcg actgggtgcg
     1261 cgaggagctc caggtggatc ccgcgcgcct ggatccgcgc acgaagctcc gcgagctcgg
     1321 gctcgactcg ctcgccgcga cgcggctgat ggtggcgctc gaggggcggt tcgggcggcg
     1381 catcgacccg gcgcagctct gggagcagcc ggacatcggc tcgctcgcgc gtcacctcgc
     1441 gtcgctggac gcgcgcggca cgccggcgtc gtcggcgcgc gtgccggagc gcccgcacta
     1501 cggcccgccg acggcggcca gcaccgacgt ggcgcagtgg gtggagtatc gcgcgctgcg
     1561 cggccgcctg gacaccctcg ccgagcacgg gatcgcgagc ccgttcttcc acgtgcacga
     1621 cggcgtgacg ggcagtgaag cggtcgtgga cggccgcacg ctcgtgaact tcgcgaacta
     1681 caactacctg ggcctgtccg gcgacgccga cgtcacgcgc gccgcgcagg acgcggtggc
     1741 gcgctggggg agctcggtgt cggcgagccg ggtggtgtcc ggcgagcgtc cggtgcaccg
     1801 cgagctggag caggagatcg cgcggttcgt ggggacggac gatgcgatcg tgtacatcgg
     1861 cggcgtgccc gccaacgtgt ccaccatctc gcacctcctg ggcgcggagg acgtggtgct
     1921 ctgcgatcag ctcgtgcaca acagcgcgat gcagggggcg gagttctccg gcgcgcgccg
     1981 gctggtgttc ccgcacaacg actgggccgc gctggacgcg atgctgacc
//
LOCUS       DASSYW010000820         2427 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1481398, whole genome shotgun sequence.
ACCESSION   DASSYW010000820 DASSYW010000000
VERSION     DASSYW010000820.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2427)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2427)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2427
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1481398"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1734)
                     /locus_tag="VFN38_13060"
     CDS             complement(<1..1734)
                     /locus_tag="VFN38_13060"
                     /inference="COORDINATES: protein motif:HMM:TIGR03435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M56 family metallopeptidase"
                     /protein_id="HET9012745.1"
                     /translation="MNAAIHVAGWTLVHFAWQGALVALAAAIALRLLRHATPQSRYAV
                     GCLALAAMLGLPGATAWRLMSAPAAAEPMAPLRRAVFLRVAPEPSAAHQDRFIVGFRR
                     TAGGAMPNDKISSAGPLVLPTIVTLWLAGVCLLLARLAGGWWRVHRLYHAAFPMPPSR
                     WQPVTERLARQLGLRRLVHVVDAPFVDGPVVIGWLQPVILLPVAALSGLTPEQVRAIL
                     AHELAHVRRHDAFVNVAQTLAETLLFYHPAVWWVSSRIRTEREHCCDDVALAVSGDAY
                     AYASALAELESWRAAQPAVLAMAATDGPLLHRVARLLAPPARSPRAGITLTLALVLLF
                     VVGAGALQLLGAGQPVGPHAARPETAAVWRMVFDHPSGQMSIRGFTARDLVRYAYQLP
                     QAHIVGGPSWLDSESFDLVTTVDHVPAADETPDIVRQLLEERFGLRVHETTIEVPALA
                     LQIARPGGVLGPNLQPSTAECFDQRAWVAAGAPNLGPLPQGQRTVFCGAWDGGVGYDR
                     VVGVTMDDFAAQLRHRVAPALRLESQLEVVNRTGLEGPWDASLEYFKPAAFAMSLTPA
                     LAPALRLAGFQS"
     gene            complement(1731..2108)
                     /locus_tag="VFN38_13065"
     CDS             complement(1731..2108)
                     /locus_tag="VFN38_13065"
                     /inference="COORDINATES: protein motif:HMM:NF015898.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BlaI/MecI/CopY family transcriptional regulator"
                     /protein_id="HET9012746.1"
                     /translation="MTDRKKPTEAELAILRVLWARGPSTVREVAEQMGREGAYTTVLK
                     LLQIMTDKGLVVRDERARTHVYEAASSEAQTQKQLVTDLLDRVFDGSAAKLVLQALSA
                     GKATPAELAEIRKLLDKHRGGRK"
     gene            2173..>2427
                     /locus_tag="VFN38_13070"
     CDS             2173..>2427
                     /locus_tag="VFN38_13070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012747.1"
                     /translation="MVGDVSEVSVRQSAQPTVFYNEATMGEFALTVMVRTNRPDATVA
                     PAIAAVRRIDPNLPVTNVRMFDAGRGLRLVAIGAVVGLALS"
BASE COUNT          391 a          848 c          854 g          334 t
ORIGIN      
        1 cgactggaag cccgcgaggc gcagcgccgg cgccagcgcc ggggtcagcg acatcgcaaa
       61 cgccgccggc ttgaagtact cgagcgaggc gtcccacggc ccttcgagtc cggtccggtt
      121 gacgacttcg agctgcgatt cgagcctcag cgcgggggcg acgcggtggc gaagttgcgc
      181 cgcgaagtcg tccatggtga cgcccacgac gcggtcgtaa ccgacaccgc catcccacgc
      241 gccgcagaac accgtacgct gcccctgggg caacggaccg aggttcggcg cgccggcagc
      301 gacccaggct cgttgatcga agcactcggc ggtcgagggc tgaaggttgg gaccgagcac
      361 accgccgggc cgcgcaattt gcagcgcaag cgccggtact tcgatggtcg tctcgtgcac
      421 gcggagtccg aaacgctctt cgaggagctg ccgcacgatg tccggggttt cgtccgcggc
      481 cgggacgtga tccaccgtgg tcacgaggtc gaacgattcc gaatcgagcc acgacggtcc
      541 gccgacgatg tgtgcctgcg gcagctgata ggcgtagcgc acgagatcgc gagccgtgaa
      601 cccgcggatc gacatctggc cagacgggtg gtcgaaaacc atccgccaga cggcggcggt
      661 ctccggccgc gcggcgtgtg gccccaccgg ttggccggcc cccagcagct gcagggcccc
      721 ggcgccgacg acaaagagga gcacgagcgc cagcgtcagc gtgatgccgg cacgcggtga
      781 gcgcgccgga ggcgcgagca ggcgcgccac gcggtgcagc agcggtccat ccgtcgcggc
      841 cattgccaga acggccggct gcgccgcgcg ccagctttcg agctcggcga gcgccgacgc
      901 atacgcgtag gcgtcgcccg agaccgccag ggccacgtcg tcgcagcagt gttcgcgctc
      961 ggtccggatg cgcgacgaca cccaccacac cgccgggtga tagaagagca gcgtttcagc
     1021 gagcgtctgc gccacgttca cgaacgcgtc gtgccgccgg acgtgcgcga gctcgtgggc
     1081 gagaatcgcg cgcacctgct cgggcgtcag ccccgagagc gccgcgaccg gcagcagaat
     1141 caccggttgc agccagccga tcaccaccgg gccgtccacg aacggcgcgt ccaccacgtg
     1201 cacgaggcgc ctgagcccga gctggcgtgc caaccgttcg gtaaccggct gccaccgtga
     1261 cggcggcatc ggaaaggcgg cgtgatacag gcgatgcacg cgccaccagc cgccggcgag
     1321 ccgggccagg agcagacaca cgccggccag ccagagcgtg acgatcgtcg gcagcaccag
     1381 cggccccgcg ctgctgatct tgtcgtttgg catcgctccc ccggccgtac ggcggaagcc
     1441 gacgatgaac cgatcctggt gcgccgcgga cggctcgggg gcgacgcgca ggaacacggc
     1501 gcggcgcagc ggcgccatcg gttccgcagc cgccggcgct gacatcagtc gccacgcggt
     1561 cgcaccgggc agcccgagca tggccgcgag cgccagacac ccgacggcgt agcgcgactg
     1621 cggcgtcgcg tgacgcagca ggcgcagcgc gatcgccgcg gccagcgcca ccagggcacc
     1681 ctgccaggcg aagtgcacga gcgtccagcc ggcgacgtga atggcggcgt tcatttgcgg
     1741 cctccgcgat gtttgtcgag cagcttccgg atttccgcga gctccgccgg cgtggccttt
     1801 cccgccgaca gcgcctgcag gaccagcttg gcggccgacc cgtcgaacac gcgatccagc
     1861 agatcggtca cgagctgttt ctgcgtctgc gcttcggacg acgcggcctc gtagacgtgc
     1921 gtccgcgccc gctcgtcgcg gaccaccagc cccttgtcgg tcatgatctg cagcagcttg
     1981 agcacggtgg tgtaggcgcc ttcgcgaccc atctgttcgg ccacttcacg cacggtgctc
     2041 ggcccgcggg cccacaacac ccgcagaatc gcgagctccg cttcggtcgg cttcttccgg
     2101 tcggtcatgc cgcggagtat ctacgaagtt cgtcgtagat gtcaatacga cagttttcgt
     2161 agttccgcgc gcgtggtcgg cgacgtgagc gaagtatcgg tgcggcagag cgcgcagccg
     2221 acggtcttct acaacgaagc gacgatgggg gaattcgccc tgacggtgat ggtccggacg
     2281 aaccggccgg acgcgaccgt ggcacccgcg attgcggcgg tccggcgcat cgatccgaac
     2341 ctgcccgtga cgaacgtgcg gatgttcgac gcggggcgtg gtctacgtct ggtggcgatc
     2401 ggcgcggtcg tcggacttgc gctgtcg
//
LOCUS       DASSYW010000821         2904 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_578407, whole genome shotgun sequence.
ACCESSION   DASSYW010000821 DASSYW010000000
VERSION     DASSYW010000821.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2904)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2904)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2904
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_578407"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1791
                     /locus_tag="VFN38_13075"
     CDS             <1..1791
                     /locus_tag="VFN38_13075"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HET9012748.1"
                     /translation="MDTLSSPFAPRSAVPNACPKCHAEHAEDLATCPVDGAPLGPSSA
                     SADPLIGRLLADRYKVLRTIGEGGMGRVYLAEHVRMGRLSAVKVMSPALTPTADAIGR
                     FNREAANASRINQPNVAAIYDFGETEDGTLYLAMEYVEGETLSAVLRREGPFSPMRAA
                     EITGQIADGLTAAHHLGIVHRDLKPDNILVTRSHDGREWVKIVDFGIAKATQADADQN
                     VTSLGMAVGTPEYMSPEQIAGEQLDGRTDLYSLGLVLFNMLTGALPHPALTSKQSLVL
                     RLTARPRTLADVRPNVAWPARLQVALDRALAPEPADRFRSVGELAAVVRAAVGSPSAS
                     GAPTQMMTPLHVEAVPTRPISPRATAARKRSWRAPLVAVILLVVGAGVVVARPPQVVR
                     EFLKVYDVSLPRAAASQPTSAHARTDSVTQAGTVSAALVAARDSANPAVPDSGGAGAH
                     AAGADSLSPLGSRYAAAHLGALGDSTGLGGAPGTQTAEQDAREVLMHVTKARELARTM
                     MLKGAGMELRTAYEEYRIFLTEHAAAPQTAMLRQELQTAMDEGLAACRTARDSVAARG
                     GPAFKCQHPAKTGILMDDSEDASAPATPTP"
     gene            complement(1798..1926)
                     /locus_tag="VFN38_13080"
     CDS             complement(1798..1926)
                     /locus_tag="VFN38_13080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012749.1"
                     /translation="MADNPPPREDPAQTKRDIRAAIIFGVVAATLEMGVLLYFFFW"
     gene            2032..2415
                     /locus_tag="VFN38_13085"
     CDS             2032..2415
                     /locus_tag="VFN38_13085"
                     /inference="COORDINATES: protein motif:HMM:NF013767.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009927 - histidine phosphotransfer kinase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hpt domain-containing protein"
                     /protein_id="HET9012750.1"
                     /translation="MTDAPHVVDADEPVFDAAALDRLKRFGGNTLLGKMIALFLEAAP
                     ARIGAARAALARNEVADVELALHSLKSSSAQLGALRMQRLSAQGEQQARTGSLDGLRA
                     LTDELDQELARAREWLITARDEGKA"
     gene            2412..2795
                     /locus_tag="VFN38_13090"
     CDS             2412..2795
                     /locus_tag="VFN38_13090"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HET9012751.1"
                     /translation="MTTIAVVEDNADNRLLLQAILEGLYDLVEYENGTDALAGLAASL
                     PDLVLLDISLPGMDGNEILARIRADARLRALPVIALTAHAMSGDREKYLAAGFNDYIT
                     KPIVDETILLAAIERWLAAPRPDGG"
BASE COUNT          462 a         1014 c         1017 g          411 t
ORIGIN      
        1 atggacaccc tttcgagccc cttcgccccg cgcagcgccg tgcccaacgc ctgtccgaag
       61 tgtcacgccg aacatgccga ggaccttgcg acgtgtcccg tggacggggc gccgctcggg
      121 ccatcctcgg cgtcggccga cccgctgatc ggacgcctgc tcgccgaccg ctacaaggtg
      181 ctgcgcacca tcggggaagg ggggatgggc cgcgtgtacc tcgcggagca cgtgcgcatg
      241 ggccggctca gtgccgtgaa ggtcatgagc ccggcgctga cgccgacggc cgacgcgatc
      301 ggacggttca atcgcgaggc cgccaacgcg agccgcatca accagccgaa cgtcgccgcc
      361 atctacgatt tcggcgagac ggaggacggc acgctctatc tcgcgatgga gtacgtggag
      421 ggagagacgc tctccgccgt gctgcggcgc gaaggcccct tctcgccgat gcgcgccgcc
      481 gagatcacgg ggcagatcgc cgacggactg acggcggcgc atcacctcgg catcgtgcac
      541 cgcgatctga agccggacaa cattctcgtc acgcgcagcc acgacgggcg cgagtgggtg
      601 aagatcgtcg acttcgggat cgcgaaggcg acgcaggccg acgccgacca gaacgtcacg
      661 tcgcttggca tggctgtcgg cacgccggag tacatgagcc ccgagcagat cgcgggcgag
      721 cagctcgacg gacgcaccga tctgtattcg ctcgggctcg tgctgttcaa catgctcacc
      781 ggtgcgctgc cgcacccggc gctgacgtcc aagcagtcgc tcgtgctgcg gctcacggcg
      841 cgtccgcgta cactggcgga cgtgcgaccg aacgtggcgt ggccggcgcg gctgcaggtg
      901 gcgctggacc gcgcgctcgc cccggagccg gccgaccgct tccgcagcgt gggcgagctc
      961 gcggccgtgg tgcgtgccgc ggtgggatct ccttccgcga gtggtgcgcc gacgcagatg
     1021 atgacgccgc tccacgtgga ggccgtgccg acgcggccga tctctccgcg tgcgaccgcg
     1081 gcgcgcaagc gctcgtggcg cgcacccctc gtcgccgtga tcctcctggt cgtgggcgcg
     1141 ggggtcgtgg tcgcgcgccc gcctcaggtg gtgcgggagt ttctcaaggt ctacgacgtc
     1201 tcgctgccga gggccgccgc cagccagccg acgtcggcgc acgcgcgaac agactcggtg
     1261 acgcaggcgg gcacggtgtc cgccgcgctc gtcgcggcgc gcgacagcgc caaccctgct
     1321 gtacccgaca gcggtggtgc aggggcgcac gccgcgggag cggactcgct ctcgccactc
     1381 ggttcccggt atgccgcggc gcatctcggt gcactcggcg actcgacggg gttgggcggc
     1441 gcgccgggca cccagacagc tgaacaggat gcgcgcgaag tgctcatgca cgtgacgaag
     1501 gcgcgcgagc tcgcacgcac gatgatgctg aagggtgcgg ggatggagct gcgcaccgcg
     1561 tacgaggaat accggatctt cctcaccgag cacgcagcgg caccgcaaac cgcgatgctg
     1621 cggcaggagc ttcagacggc gatggacgaa gggctggccg cgtgccgcac ggcgcgcgac
     1681 tcggtcgccg cgcgcggcgg acccgcgttc aagtgccagc atccggccaa gacgggcatc
     1741 ctcatggacg attccgagga cgcatccgcg ccggcgacgc cgacgccctg acgtcggcta
     1801 ccagaagaag aaatacagca agacgcccat ctcgagtgtc gcggccacca cgccgaagat
     1861 gatggcggcc cggatgtccc gcttcgtctg ggcgggatcc tcgcgcggcg gtgggttgtc
     1921 ggccatgccg aaggttatcc ggccgtccgc gttccggcga gcggcggtac gtcgttacct
     1981 tgtccccatg cacgagctga tacatgcatc gtcgcgccac ttcggagtga gatgacggac
     2041 gcaccacacg tcgtcgacgc cgacgaaccg gtgttcgacg ccgccgcact cgaccgcctc
     2101 aagcggttcg gcggcaacac actgctcggc aagatgatcg cactcttcct ggaggcggcg
     2161 ccggcgcgca tcggggcggc gcgcgctgca ctggcgcgca acgaggtcgc cgacgtcgag
     2221 ctggcactac actcgctcaa gtcgagctcg gcgcagctcg gcgcattgcg catgcagcga
     2281 ctgagcgcgc agggtgagca gcaggcgcgt acgggatcgc tcgacggcct gcgcgcgctc
     2341 acggacgagc tggatcagga gctcgctcgc gcccgcgagt ggctcatcac cgcccgcgat
     2401 gagggaaagg catgaccacg atcgccgtcg tcgaggacaa cgcagacaac cggctgctgc
     2461 tgcaggcgat cctcgaagga ctctacgacc tggtggagta cgagaatggc acggatgcgc
     2521 tcgccggact cgccgcctcg ctccccgacc tggtgctgct cgacatctca ctgccaggaa
     2581 tggatgggaa cgagatcctg gcgcgcatcc gcgccgacgc caggctccgc gcgctgccgg
     2641 tgatcgcgct cacggcccat gcgatgtcgg gcgaccgcga gaagtacctc gccgcggggt
     2701 tcaacgacta catcaccaaa ccgatcgtgg acgagaccat cctcctcgcg gccatcgagc
     2761 gatggctggc cgccccgcgc cccgacggcg gctgacgcgg gaccccggac gcaagcggcg
     2821 gtgtaggcag tgtcgagggt gacgtgcgct gccggcgttt cgtcctcggt tacctacccg
     2881 ccgtccagca tcccatctca tgca
//
LOCUS       DASSYW010000822         2983 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_191737, whole genome shotgun sequence.
ACCESSION   DASSYW010000822 DASSYW010000000
VERSION     DASSYW010000822.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2983)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2983)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2983
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_191737"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..200)
                     /locus_tag="VFN38_13095"
     CDS             complement(<1..200)
                     /locus_tag="VFN38_13095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012752.1"
                     /translation="MTNTFAYLPLLALAGTLHAQGDARRIAIDERLAADAGLRLGDRV
                     VLAATLEAAGDTVVVGAVVRRRA"
     gene            complement(277..687)
                     /locus_tag="VFN38_13100"
     CDS             complement(277..687)
                     /locus_tag="VFN38_13100"
                     /inference="COORDINATES: protein motif:HMM:NF018980.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HET9012753.1"
                     /translation="MTARPIVTDPDTGIPELIRRLSDDSKRLVTDEVQLAKLETKESL
                     HRATRGVLWMVLAFGAGVVMLVALTILLATLLGRLDDGHMWFGAIVTGILELALGGWL
                     VKKGLTSYTAPSYSLAVTRESLKDTAHWSTSARR"
     gene            complement(768..1466)
                     /locus_tag="VFN38_13105"
     CDS             complement(768..1466)
                     /locus_tag="VFN38_13105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent transcriptional regulator"
                     /protein_id="HET9012754.1"
                     /translation="MTTSPPPQSLSGPVEDYLKAIYDLELVGAPASTNDIADRLAISP
                     ASVSGMVRRLADQGLITHEPYRGVRLTGDGRRAALRTLRRHRILECYLTEVLGYPWDR
                     VHAEAERLEHAASEELVERMAAALGDPVQDPHGAPIPTRDGRVEESALRTLAEAVPGE
                     QVRVRRVHDKEPERLRYLAELGIRPGSVVRILDKAPFDGPITLWVDEAGGGASRAVGV
                     GLAEQVFIENAPAG"
     gene            complement(1463..1906)
                     /locus_tag="VFN38_13110"
     CDS             complement(1463..1906)
                     /locus_tag="VFN38_13110"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HET9012755.1"
                     /translation="MYRRILVPLEHTDYDDAIVAHVRDLAKLCSASVVLIHVADGWAA
                     RNQHQLALRESAEMKYDREYLEQRADALEAAGITTECVLAGGDPGREIAAAAEREKCD
                     LVAMSTHGHRGIQDLLRGSVANDVRHHTTVPVLMVRGAPRHLHPA"
     gene            complement(1943..>2983)
                     /locus_tag="VFN38_13115"
     CDS             complement(1943..>2983)
                     /locus_tag="VFN38_13115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Nramp family divalent metal transporter"
                     /protein_id="HET9012756.1"
                     /translation="LAQACRDHYSTPVVWALWFLCEIAIAACDMAEVIGSAIALNLLF
                     GIALPVGVAITALDVLLLLYLQNKGVRILEALVITLVATVGVCFGFELFLARPDFADV
                     MKGFVPTADIISDRNKLYIAIGILGATVMPHNLYLHSSIVQTRRYAETSEGKREAVRY
                     AFVDSTIALSFALFINAAILIIAAASFHTTGNQAVAEIQDAYKLLTPLLGAGASTMFA
                     LALLASGQNSTLTGTLAGQIVMEGFLNIRIRPWLRRLITRLIAIVPAVIVAIIGGESG
                     TAKLLILSQVILSLQLSFAVFPLVMFTSNKLKMGEFVNPTWMKVMAYTVATVIASLNI
                     WLLFQTIRGWLA"
BASE COUNT          458 a         1040 c         1055 g          430 t
ORIGIN      
        1 gcccggcgac ggacgacggc cccgacgacc accgtgtcgc ccgccgcctc gagggtcgcc
       61 gccaggacga cgcggtcgcc gagccggagg ccggcgtcgg cggcgagacg ctcgtcgatg
      121 gcgatgcgcc gcgcgtcacc ctgcgcgtgc agggtgccgg cgagggcgag cagcggcagg
      181 tacgcgaaag tattcgtcac gggagctcag cctgaatgcg cgacgcgcgg cgccggttcc
      241 cgggcgccgc gcgtgagact cgccgagccg ccgcggtcag cgacgcgccg aggtggacca
      301 gtgggcggtg tccttcagcg attcgcgcgt caccgccagc gagtacgacg gcgccgtgta
      361 gctcgtgagc cccttcttca ccagccatcc cccgagtgcc agctccagga tgcccgtgac
      421 gatggcgccg aaccacatgt ggccgtcgtc gaggcgcccc agcagcgtgg cgaggaggat
      481 ggtgagcgcg accagcatca cgaccccggc gccgaacgcg agcaccatcc acaggacgcc
      541 gcgcgtcgcg cggtggaggc tctccttcgt ctcgagcttc gcgagctgca cttcgtcggt
      601 cacgagccgc ttcgaatcgt cgctgaggcg gcggatcagc tcggggatcc ccgtgtcggg
      661 gtcggtcacg atcggtcggg cggtcacgcg ttcctccagg tagccgcgga aagctgctcg
      721 gtctcgccgc gaaccggggc aagaggcgtt cccggacccg cgaggcgtca gccggcgggg
      781 gcgttctcga tgaacacctg ctcggcgagc cccaccccga ccgcgcgcga cgcccctccc
      841 ccggcttcgt ccacccagag cgtgatgggt ccgtcgaacg gcgccttgtc caggatgcgc
      901 accacggagc ccgggcgaat gccgagctcg gccaggtagc gcagccgctc cggctccttg
      961 tcgtgcacgc ggcgcacgcg cacctgctcg cccggcaccg cttccgcgag ggtccgcagc
     1021 gcggactcct ccacgcggcc gtcgcgcgtg gggatgggcg cgccgtgcgg atcctgcacc
     1081 gggtcgccca gcgccgcggc catccgctcc acgagctcct ccgacgccgc gtgctccagc
     1141 cgctccgcct cggcgtgcac gcggtcccac ggatagccca gcacctcggt gaggtagcac
     1201 tccaggatgc gatgccggcg cagcgtgcgc agcgccgcgc gtcgcccgtc gccggtaagc
     1261 cgcaccccgc gatagggctc gtgggtgatg aggccctggt cggcgaggcg ccgcaccatt
     1321 ccgctcaccg acgcggggga gatggccagc cggtcggcga tgtcgttcgt ggacgcgggc
     1381 gcgccgacca gctcgaggtc gtagatcgcc ttgagatagt cctcgaccgg gccgctcagc
     1441 gactgcggcg ggggggaggt ggtcacgccg ggtggaggtg ccgcggcgcg ccgcgcacca
     1501 tcagcacggg aaccgtggtg tgatgccgca cgtcgttcgc cacgctgccg cgcaggagat
     1561 cctggatgcc gcggtggccg tgcgtgctca tcgccacgag gtcgcacttc tcccgctcgg
     1621 ccgccgcggc gatctcgcgg ccgggatcgc cgccggcgag cacgcactcc gtcgtgatcc
     1681 ccgccgcctc cagggcatcg gcgcgctgct ccaggtactc gcggtcgtac ttcatctccg
     1741 cgctctcgcg cagcgccagc tggtgctgat tgcgcgccgc ccatccgtcg gcgacgtgga
     1801 tgagcaccac cgacgcgctg cagagcttcg cgaggtcgcg cacgtgggcg acgatcgcgt
     1861 cgtcatagtc ggtgtgctcg agcggaacga ggatgcggcg gtacatgacc gggcccggga
     1921 gtgtcgtgac gaggcgcccg cgctatgcga gccagccccg gatcgtctgg aacagcaacc
     1981 atatgttgag gctggcgatc accgtcgcca ccgtgtacgc catcaccttc atccacgtgg
     2041 ggttcacgaa ctcgcccatc ttcagcttgt tcgacgtgaa cattaccagc gggaacacgg
     2101 cgaaggacag ctggaggctg aggatcacct ggctcaggat gagcagcttc gccgtccccg
     2161 attccccacc gatgatggcg acgatgaccg cgggcacgat ggcgatgagc cgggtgatga
     2221 ggcgccgcag ccagggacgg atccggatgt tcaggaaccc ctccatcacg atctggcccg
     2281 cgagcgttcc cgtcaacgtc gagttctgcc ccgaggcgag cagcgcgagg gcgaacatgg
     2341 tgctggcacc ggcgccgagc agcggcgtga gcagcttgta cgcatcctgg atctccgcca
     2401 ccgcctggtt gcccgtggtg tggaagctcg ccgcggcgat gatcaggatg gccgcgttga
     2461 tgaacagggc gaacgagagg gcgatcgtcg agtccacgaa ggcgtagcgc accgcctccc
     2521 gcttcccctc cgaggtctcg gcatagcggc gcgtctgcac gatggacgag tgcagataca
     2581 ggttgtgcgg catcaccgtg gcgcccagga tgccgatcgc gatgtagagc ttgttgcgat
     2641 ccgagatgat gtccgcggtg ggcacgaagc ctttcatcac gtcggcgaag tcgggacgag
     2701 cgaggaacag ctcgaacccg aagcatacgc cgaccgtggc cacgagggtg atcaccagcg
     2761 cctcgaggat gcgcactccc ttgttctgca ggtacagcag gagcaggacg tcgagcgcgg
     2821 tgatggccac gcccaccggc agggcgatcc cgaacagcag gttcagcgcg atggccgatc
     2881 cgatcacctc ggccatgtcg caggcggcga tggcgatctc gcagaggaac cagagcgccc
     2941 acaccaccgg ggtgctgtag tggtcacgac aggcctgcgc gag
//
LOCUS       DASSYW010000823         3040 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_615509, whole genome shotgun sequence.
ACCESSION   DASSYW010000823 DASSYW010000000
VERSION     DASSYW010000823.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3040)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3040)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3040
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_615509"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..361
                     /locus_tag="VFN38_13120"
     CDS             <1..361
                     /locus_tag="VFN38_13120"
                     /EC_number="3.1.3.5"
                     /inference="COORDINATES: protein motif:HMM:NF014871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0008253 - 5'-nucleotidase activity
                     [Evidence IEA];
                     GO_process: GO:0009166 - nucleotide catabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="5'-nucleotidase"
                     /protein_id="HET9012757.1"
                     /translation="TGRTIKQLLEQQFDNPAAGRRSMLQVSSGFSYAYRLNAPAGQHV
                     DPASIRIDNRPVAPTDRVRVAASDFLVDGGDAFAAFATGTNRVAVGSDLNALVAYFAA
                     RSPVSPPIGRRVVQLDP"
     gene            473..>3040
                     /locus_tag="VFN38_13125"
     CDS             473..>3040
                     /locus_tag="VFN38_13125"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HET9012758.1"
                     /translation="MLTALVCLGTALGLRYVLNETIGNALPFVTVFGATAAAQWYGGR
                     YSGMSVAVLGLVGCVLMLTPADGGTRVDEVGGVLGIAAFLFTSALILGFGEVARVAQV
                     AAHDRSETLRVTLHSIGDAVITTDTRGHITSLNAVAESLTGWAYADAAGQPLDAVFRI
                     VNESTRLPVDNPAAKALQAGTVVGLANHTVLIRRDGVEHPIDDSAAPIRDAEGEVSGC
                     VLVFRDVTAQRQTERERASQLQTARILAAIVDSSEDAIIRKRLDGTIETWNAGAERLF
                     GYRAADAIGRHVSLVIPSDRIHEEEQIIATLKAGRRINHFETERVRADGARIWVSLTI
                     SPIADETGTVVAASKIVRDVTPRVHAEAEREKFVKVLENSQDFIGMCDLQGVPFFVNR
                     AGLEMVGLESLEEARQMPVKEFFFPEDQARIVGEFFPHVLRHGQGEIEVRFRHFKTGA
                     ARWMAYKVLTLTDHTGAPTGFATVSQDVTERKARGDDLIEADRRKNEFLAMLAHELRN
                     PLAPLSNAVHALRRREPGDDHTVAVATDILDRQIRQMSRLVNDLLDASRISRGKIELR
                     RARIALRPVVEEAIETVRPLVTRLDHTLTITLPPETLYVDGDAGRLSQVIGNLLANAA
                     KFTDKGGRIWLSAEREGDEAVIRVRDNGIGIAPEHRATLFDMFVQVDTAIERSRDGLG
                     IGLALVKRLVELHGGTIQVDSAGTGCGSEFTVRLAALSASAEPPEVDLRVPATVQSIA
                     RRVLVVDDNHDAAESLAMLLQFEGHEIYQAHDGAEALRTVERVRPDVVLMDIGLPILD
                     GYETCRRIRDQAWGAAIVMVAITGWGQEEDREQSRAAGFDRHLVKPVDHDQLLRVVGS
                     "
BASE COUNT          500 a          995 c         1062 g          483 t
ORIGIN      
        1 gaccggccgg acgatcaagc agctgctcga gcagcagttc gacaacccgg ccgcgggccg
       61 gcgcagcatg ctgcaggtgt cgagcgggtt ctcctacgcg taccgcctga atgcgcccgc
      121 cggccagcac gtcgaccccg cgtcgattcg gatcgacaat cggccggtgg cgccgaccga
      181 ccgcgtgcgc gtggcggcga gcgactttct cgtcgacggc ggggatgcct tcgccgcgtt
      241 cgccaccggc accaaccggg tcgcggtcgg ttccgatctc aatgcgctgg tggcctactt
      301 cgcggcccga tcgccggtgt cgccgccgat cgggcggcgg gtggtgcagc tcgatccctg
      361 agcctccgtc aggcgcatcc gactgactga attagaatcc ttgccaccca gcatgggggt
      421 ggaaccctct ccgacgcggc ccatccgtcg ttcccctccg gcaaccacat cggtgctgac
      481 cgcgctcgtg tgcctgggga cggcgttggg attgcggtac gttctcaacg agacgatcgg
      541 caacgccttg ccgttcgtca cggtgttcgg ggcaaccgcc gcggcccagt ggtacggcgg
      601 gcgatactcc ggcatgtcgg tcgccgtgct cggcctggtc gggtgcgtgt tgatgctgac
      661 gccggccgac ggcgggaccc gcgtggacga agtcggcggc gtgctcggca tcgccgcctt
      721 tctgttcacc agcgcactta tcctcggatt cggcgaggtc gcccgcgtcg cgcaggtcgc
      781 cgctcacgat cgcagcgaga cgctgcgcgt cacgctgcac agcatcggcg acgcggtgat
      841 caccaccgat acacgcgggc atatcacctc gctgaacgcg gtcgccgagt cgctgaccgg
      901 ctgggcgtac gcggacgccg ccggtcagcc gctcgacgct gtcttccgga tcgtgaacga
      961 aagcacgcgt ctgccggtcg acaacccggc ggcgaaagcg ctccaggcgg gtaccgttgt
     1021 cgggctcgcg aaccatacgg tgctgattcg ccgcgacggc gtcgagcacc ccatcgacga
     1081 cagcgccgct ccgatccggg atgcggaggg cgaggtgtcc ggttgcgtgc tggtgttcag
     1141 ggatgtcacg gcgcagcggc agacggagcg ggaacgggcc agtcagctgc aaaccgcacg
     1201 catcctcgcc gcgattgtgg actcctcgga agacgccatc atccgcaagc gcctcgacgg
     1261 gacgatcgaa acctggaatg ccggcgccga gcggctgttc gggtatcggg cggccgacgc
     1321 gatcggcagg catgtctcgc tcgtgatccc gtccgaccgc atccatgaag aggagcagat
     1381 catcgcgacg ctgaaggcgg gacgccggat caaccacttc gagaccgagc gcgtccgcgc
     1441 cgacggcgcg cggatctggg tgtcgttgac gatctcgccg attgccgacg agacgggtac
     1501 ggtggtggcg gcgtccaaga tcgtgcgtga cgtgacgccg cgggttcacg ccgaagccga
     1561 gcgcgagaag ttcgtcaagg ttctggagaa cagccaggac ttcatcggga tgtgcgacct
     1621 ccagggcgtg ccgttcttcg tcaaccgcgc cgggttggag atggtgggcc tggagagtct
     1681 cgaagaagcc aggcagatgc cggtgaagga gttcttcttc cccgaggatc aagcccgcat
     1741 cgtcggcgag ttttttccgc acgtgctgcg ccacgggcag ggcgaaatcg aggtccgttt
     1801 ccggcacttc aagacgggcg cggcgcgttg gatggcctac aaggttctga cgctcaccga
     1861 ccacaccggc gcgcccaccg gcttcgcgac cgttagccag gatgtgaccg agcgaaaggc
     1921 gcggggcgac gatctcatcg aagccgatcg ccgcaagaac gagtttctgg ccatgctggc
     1981 gcacgagctc cgcaacccgc tggcgccgct cagcaacgcg gttcacgcgc tccggcggcg
     2041 cgaaccagga gacgaccaca cggttgccgt cgccaccgac atcctcgacc ggcagatccg
     2101 gcagatgtcg cgactggtaa acgatcttct cgacgccagc cgcatctccc gcgggaagat
     2161 cgagctgcga cgcgcgcgga tcgcgctccg gccggtcgtc gaggaggcga ttgaaacggt
     2221 tcggccgctg gtgaccaggc ttgatcacac gctgacgatc acgctgccgc cggaaacgct
     2281 gtacgtcgac ggtgacgccg gccgcctgtc gcaggtgatc ggcaacctgc tcgccaacgc
     2341 tgcgaagttc accgacaagg gcgggcgcat ctggctgtcc gcggaacgcg agggcgacga
     2401 ggcggtgatt cgtgtgcgtg acaacgggat cggcatcgcg ccggagcacc gggccacgtt
     2461 gttcgacatg ttcgtccagg tcgacacggc gatcgaacgg tcgcgcgacg gactgggcat
     2521 cggcctggcg ctcgtgaaaa ggctggtgga gctccacggc ggaacgattc aggtggacag
     2581 cgctggaacc gggtgtggca gcgagttcac ggtgcgcctc gccgcgctgt cagcgtcagc
     2641 cgagccgccg gaggtcgacc tgcgtgtgcc ggcgacagtc cagtcgatcg cgcgacgcgt
     2701 gctggttgtg gacgacaacc acgacgccgc cgagtcgctc gcgatgctgc tgcagttcga
     2761 aggccacgag atctaccagg cccacgacgg cgccgaggcg ctgaggaccg tcgagcgcgt
     2821 gcggccggac gtcgtcctga tggacatcgg tttgccgatc ctcgatggct acgaaacatg
     2881 tcgacgcatc cgcgatcagg catggggtgc ggcgatcgtc atggtcgcca tcaccggctg
     2941 gggacaggaa gaggatcgcg aacagtcacg cgcggcgggt ttcgaccggc acctggtgaa
     3001 gccggtggac cacgaccagc tgcttcgggt cgtcggctcg
//
LOCUS       DASSYW010000824         2136 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_873446, whole genome shotgun sequence.
ACCESSION   DASSYW010000824 DASSYW010000000
VERSION     DASSYW010000824.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2136)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2136)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2136
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_873446"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..457
                     /locus_tag="VFN38_13130"
     CDS             <1..457
                     /locus_tag="VFN38_13130"
                     /inference="COORDINATES: protein motif:HMM:TIGR02246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HET9012759.1"
                     /translation="IAARGFFEWDSGPEPVRELPSDDADRAAVLALRDRWVDVVASGD
                     ARGLADLVTHDYEVWTHGAPSLGGPRTVVAMMVAALAQFSVEQAYEPSETVVSGDWAF
                     QRGIERIRATPRGGGPTRENVQRALVILRRGEDGQWRYARGMTNGLPQP"
     gene            complement(448..>2136)
                     /locus_tag="VFN38_13135"
     CDS             complement(448..>2136)
                     /locus_tag="VFN38_13135"
                     /inference="COORDINATES: protein motif:HMM:NF024958.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5724 domain-containing protein"
                     /protein_id="HET9012760.1"
                     /translation="ERTPLAAADLTEGAVDVGWFHSAHDTLGAERWKVLDTAAKYAAS
                     SAGHTRAQLFARAMSGVTTADAIVERMKSGRHQDSVRALGLVPLADGTAGQRDLLVRY
                     QALQNFHREARQFGAQRKESERRAVAIGLANLARTAGFRDPQRLQWAMEQAAVADLAR
                     GPVVLERGDVTLTLALGGDGVASFGITKNGKPLKSLPASLKKDADVEELRERLAELKR
                     QRSRVRDALEEAMCRGDAFSAAELRTLFDHPVLAPSVARLVFVGDGVAGYPAEGGRVL
                     RDHRGALHALGNDEAVRIAHPHDLFVRGDWSAWQRECFAAERVQPFKQLFRELYPITE
                     SERERMRSSRYAGHQVNPRQALALLGARGWVARPEEGVSRTFHEQGLTVRLSFQETFM
                     TPAEIEGLTLEDVLFTKKGEWNEVALSSIPPRLFSEAMRDLDLVVSVAHRGGVDPEAT
                     ASTVEMRGTLVRETAGLLGLENVDVVSHHVIVRGVRGTYSIHLGSAGVMLMPGTAIPI
                     VAVHSQHRGRLFLPFADDDPRTAEVLSKVLLLARDAEIKDPNILEWIRAAKPQG"
BASE COUNT          328 a          767 c          705 g          336 t
ORIGIN      
        1 gatcgcggcg cgtggattct tcgagtggga ttcgggaccg gagccggtgc gtgagctgcc
       61 cagcgacgat gccgaccgcg ccgcggtcct ggcgcttcgc gaccggtggg tcgacgtcgt
      121 cgcttcgggc gacgcccgtg ggctggccga cctcgtgacg cacgactacg aggtgtggac
      181 gcacggcgct ccgtcgttag gcgggccccg aacggtcgtg gcgatgatgg tagcggcgct
      241 tgcacagttc tcggtcgagc aggcgtacga gccgtcggag acggtcgttt ccggcgactg
      301 ggcgttccag cgcggcatcg agcgcattcg cgcgacgccg cgcggcggag gacccacgcg
      361 tgagaacgtg cagcgcgcgc tcgtgatcct gcggcgcggt gaggacgggc agtggcggta
      421 cgcgcgcgga atgacgaacg gcctccctca gccctgaggc ttggccgcgc gaatccactc
      481 gaggatgttt ggatccttga tctccgcgtc gcgcgcgagc agcagcacct tcgacaacac
      541 ctccgccgtc ctcggatcat cgtcggcgaa cggcaggaac aaccgaccgc gatgctgcga
      601 gtgcaccgcc acgatcggga tagccgtccc cggcatgagc atcacgcccg cgctgccgag
      661 gtggatggag tatgtccctc ggacgccacg aacgatgacg tggtgcgaca cgacgtcgac
      721 gttctcgagt ccgagcagtc ccgccgtctc gcggacgagc gtgccccgca tctcgacggt
      781 ggacgccgtc gcttccgggt ccacaccgcc ccggtgcgcg acactcacca cgagatccag
      841 atcgcgcatc gcctcgctga acagccgcgg tggaatcgac gacagcgcga cttcgttcca
      901 ctcgcccttc ttcgtgaaca gcacgtcctc gagcgtcaga ccctcgatct cggccggcgt
      961 catgaacgtt tcctgaaacg acaaccgaac ggtcagcccc tgctcgtgga acgtgcggct
     1021 cacgccctcc tccggacggg cgacccagcc gcgcgcgccg aggagcgcga gtgcctgacg
     1081 aggattgacc tgatgccccg cataacgact gctgcgcatc cgctcgcgtt cgctctccgt
     1141 gatcggatac agctcgcgga acagctgctt gaatggctgc acgcgctccg ccgcgaagca
     1201 ctcgcgctgc catgccgacc agtcaccgcg cacgaacaga tcgtgtgggt gtgcgatccg
     1261 aaccgcttcg tcgttgccga gcgcgtgcag cgcacccctg tgatcgcgca gcacgcgtcc
     1321 gccttctgcc gggtagccgg cgacgccatc gccaacgaac acgagcctcg ccaccgacgg
     1381 cgcgagcacc gggtggtcga acagcgtgcg aagctccgcc gcggaaaacg catcgccacg
     1441 gcacatcgct tcctcgagcg cgtcacggac gcgtgagcgc tggcgcttga gctccgcgag
     1501 acgttcccgg agctcctcga cgtcggcgtc cttctttagt gatgcgggca gcgacttgag
     1561 cggctttccg ttcttcgtga tcccgaacga cgcgacaccg tccccaccga gcgccagcgt
     1621 cagcgtcacg tcgccgcgct cgagcaccac cgggccacgc gcgagatcgg cgaccgcggc
     1681 ctgctccatg gcccactgca gtcgctgagg atcgcggaac ccggctgttc gcgcgaggtt
     1741 cgcgagcccg atcgcgaccg cgcgtcgctc gctctccttc cgttgcgcgc cgaattgccg
     1801 ggcctcgcga tggaagttct ggagcgcctg atagcgcacg aggagatcgc gctgcccggc
     1861 tgttccgtcc gcgagcggca cgaggcctaa cgcgcgcacc gaatcctggt gacgcccgct
     1921 cttcatccgc tcgacaatcg catcggccgt cgtcacgccc gacatcgccc gcgcgaacag
     1981 ctgggcccgc gtgtgacccg cgctgctcgc ggcgtacttc gccgccgtat cgagcacctt
     2041 ccagcgctcg gcgcctaacg tgtcgtgcgc ggagtggaac cagccgacgt cgaccgcgcc
     2101 ttcggtgaga tcggcggcgg cgagcggcgt ccgctc
//
LOCUS       DASSYW010000825         3230 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_744785, whole genome shotgun sequence.
ACCESSION   DASSYW010000825 DASSYW010000000
VERSION     DASSYW010000825.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3230)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3230)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3230
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_744785"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..340
                     /locus_tag="VFN38_13140"
     CDS             <1..340
                     /locus_tag="VFN38_13140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012761.1"
                     /translation="STAWRRPLRIGETVFGQIVVGVHPKALSVPTEALVPDGEGFKVF
                     VVDSASIAHGQTVTIGARTDSTAEVLEGLKGGERIVTYGAYGVEDSVKVTTTAAKPAP
                     AAAARPPARP"
     gene            337..>3230
                     /locus_tag="VFN38_13145"
     CDS             337..>3230
                     /locus_tag="VFN38_13145"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HET9012762.1"
                     /translation="MTSDTIDDVERATPGPVRRPRRTLFAQLAEQRRFVYMAVVLLSV
                     GGIWAALRLPSAIYPELEFSRVTVVVNGTSFGARQVLFSVTRPIEEAVSIVPGVTRVQ
                     SRSIRGGSETNITFAPRTDMIVALQQVQARVNQVTADLPQGLDIIVERQTPPLFPTIS
                     YNLEGGDPATLYDIARYQIKPLISRVPGVGRVDVQGSDVREIEVVADPARLAGQQLTF
                     DDVATAIRQATTVTAVGRMPENYKQYLIVSAGEAHSIDDIANVVVGHGVRVRDIATVL
                     SGTEDHVSIIAGDGKPAALLNITRQPGGNTLAIADSIATIAHNLRSTLPPGVRIKAVY
                     DQAALVRDAVKSVRDAMLIGAVLAIVVLLLFLRHARITAISASSIPLTMAITVFVMSL
                     VGQTFNLMTLGAMAIAIGLVIDDAVVITENIVRHLHLNPDRDAAIREAVQEIIWPVTT
                     STITTVVVFLPLGLLTGVEGQFFHALSITLTISVLVSLVLALSIIPLLSEQYLTAADA
                     ESDVIPSEAPARRSASDEGRNRDSPDRELALRKPGLLARLGHRIDRMSDRYEQSLASV
                     LHHARPMTIVALVLVAAGVLAYRFVQTGFLPEMDEGAFVIDYFTPGGTALAETDRQLH
                     IVERILAATPEITGTSRRTGAELGLFATEQNTGDIVARLRPLNQRDRSIFEVMDDVRV
                     KFQQAVPRMRIEFVQILSDVINDLAGAASPVEIRLFGQDLVQLEAYGTALGEKLEPID
                     GLEDLFNGVSEPSAELTMEIAGAEANRVGLTPEQVASEVSGALLGVEAGEVRLSDRSV
                     GVRVRAPDSVRFNPRLLGSLPVFSQTTQATVPLASLATFTPVDARGELRRENQQQLII
                     MTADLSGRSLGAVMSDVRRVLAANPPPAGVRVELGGQDASQRQAFRALLLVLGLAAAS
                     VIGVMVLQFQSFVEPFVILLAAPLSFVGALVLLLLTGTALNVSSFMGLILL"
BASE COUNT          488 a         1094 c         1110 g          538 t
ORIGIN      
        1 ctcgacggcg tggcgacgcc cgctccgcat cggtgagacg gtgttcggtc agatcgtggt
       61 cggtgtgcac ccgaaggcgc tctcggtgcc gaccgaagcg ctcgttcccg acggcgaggg
      121 gttcaaggtc ttcgtggtcg actcggcgag catcgcgcac gggcagaccg tgacgatcgg
      181 cgcgcgcacc gattcgaccg ccgaagtgct cgaagggctc aagggtggtg agcgcatcgt
      241 gacgtacggc gcgtatggcg tcgaggacag cgtcaaggtg acgacgacgg ccgcgaagcc
      301 tgctcccgcc gccgccgctc ggccaccggc gaggccatga cgtccgacac gatcgacgac
      361 gtcgagcgcg cgacgccggg tcccgttagg cggccgcgcc ggacgttgtt cgcccagctc
      421 gccgagcagc ggcggttcgt ctacatggcg gtcgtgctgc tcagcgtcgg cggcatctgg
      481 gccgcgctgc gcctgccgtc cgcgatctat ccggagctcg agttctcgcg cgtcacggtc
      541 gtcgtgaacg gtacgtcgtt cggggcgcgg caggtgctgt tcagcgtcac gcggccgatc
      601 gaagaggcgg tgagcatcgt cccgggagtg acgcgcgtcc agtcgcggtc gattcgcggt
      661 ggcagcgaga cgaacatcac gttcgcgccg cgcaccgaca tgatcgtcgc gctgcagcag
      721 gtacaggcgc gcgtcaatca ggtcacggcc gacttgccac aggggctgga catcatcgtc
      781 gagcggcaga cgccgccgct cttcccgacc atctcgtaca atctcgaggg cggcgatccg
      841 gcgacgctgt acgacatcgc gcgctatcag atcaagccgc tcatctcgcg cgtgccgggc
      901 gtcgggcgcg tcgacgtgca gggcagcgac gtccgcgaga tcgaagtcgt cgccgacccg
      961 gctcgactcg ccggccagca gctgacgttc gacgacgtcg cgacggcgat tcgtcaggcg
     1021 accaccgtga cggccgtcgg ccgcatgccc gagaactaca agcagtatct gatcgtctcg
     1081 gccggcgagg cccattcgat cgacgacatc gccaacgtcg tcgtggggca cggcgtgcgc
     1141 gtgcgcgaca tcgcgaccgt gctgtcggga accgaggacc acgtcagcat catcgccggc
     1201 gatggcaagc cggcggccct gctcaacatc acgcggcagc cgggcggcaa cacgctcgcg
     1261 atcgcggaca gcatcgcgac catcgcgcac aacctgcggt cgaccctgcc tcccggcgtt
     1321 cgcatcaagg cggtgtacga ccaggcggcg ctcgtccgcg acgccgtgaa atccgtgcgc
     1381 gacgcgatgc tgatcggcgc cgtgctcgcg atcgtcgtgc tgctgctgtt cctccgccac
     1441 gcccgaatca cggcgatcag cgcgtcgtcg atcccgctca cgatggcgat caccgtgttc
     1501 gtcatgtcgc tcgtcgggca gacgttcaac ctgatgacgt taggcgccat ggcgatcgcg
     1561 atcggcctcg tcatcgacga cgcggtcgtg atcaccgaga acatcgtccg gcatctgcac
     1621 ctgaaccccg accgcgacgc ggcgattcgc gaggcggtgc aggagatcat ctggccggtg
     1681 acgacgtcga cgatcacgac cgtcgtggtc ttcctgccac tcgggctgct caccggcgtc
     1741 gagggtcagt tcttccacgc cctgtcgatc acactgacga tctcggtgct cgtctcgctc
     1801 gtgctggcgc tgtcgatcat tccgctgctg agcgagcagt acctcaccgc ggcggatgca
     1861 gagtccgatg tcattccgag cgaagcgcct gcccggagga gcgccagcga cgaagggagg
     1921 aatcgcgata gtcccgatag agagctagcc ctcagaaagc ccggcctcct cgcccggctc
     1981 ggccaccgga tcgatcggat gtccgatcga tacgagcagt cgctcgccag cgtgctgcat
     2041 cacgcccggc ccatgactat cgtcgcgctc gtcctcgtcg ccgccggcgt gctcgcctat
     2101 cgcttcgtgc agaccggttt cctccccgag atggacgaag gcgcgttcgt tatcgactac
     2161 ttcactcccg gaggaaccgc gctcgccgag accgatcggc agctgcacat cgtcgagcgc
     2221 attctcgcgg ccacgcccga gatcaccggc acgtcgcgac gcaccggcgc cgagctgggc
     2281 ctctttgcca cggagcagaa taccggcgac atcgtggcgc gtctcaggcc gctgaatcag
     2341 cgcgatcgct cgatcttcga ggtgatggac gacgttcgcg tgaagttcca gcaggcggtt
     2401 ccgcgcatgc gcatcgagtt cgtgcagatc ctctcggacg tcatcaacga cctcgctggc
     2461 gcggcgagcc ccgtggagat ccggctcttc ggccaggacc tcgtgcagct ggaggcgtac
     2521 ggcacggcgc tcggtgagaa gctggagccc atcgacgggc tcgaggacct gttcaacggc
     2581 gtgagcgagc cgagcgcgga gctgacgatg gagatcgctg gcgccgaggc gaaccgtgtc
     2641 gggctgacgc cggaacaggt ggcctccgag gtgagcggcg cgctgctcgg cgtcgaggcg
     2701 ggcgaagttc gactctccga ccgatcggtg ggcgtacggg tccgcgcgcc cgattcggtg
     2761 cggttcaacc cgcggctgct tggctcactc ccggtgttct cgcagacgac gcaggcgacg
     2821 gtgcccctcg cgtcgctcgc gacgttcacg ccggtggatg cgcgcggcga gctgcggcgt
     2881 gagaaccagc agcagctgat catcatgacg gcggatctga gcggccgttc gttaggcgcg
     2941 gtgatgagtg acgttcgcag ggtgctcgcg gccaacccgc cgccggccgg cgtgcgcgtc
     3001 gagctcggcg gacaggacgc gagccagcgg caggcgttcc gcgcgctgct cctcgtgctc
     3061 gggctcgcgg cggcgagcgt gatcggcgtg atggtcctgc agttccagtc gttcgtggag
     3121 ccgttcgtga tcctgctcgc cgcgccgctg tcgttcgtcg gggcgctcgt gctcctgctg
     3181 ctcacgggga cggcgctcaa cgtgtcgtcg ttcatggggc tgatcctgct
//
LOCUS       DASSYW010000826         3247 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_578477, whole genome shotgun sequence.
ACCESSION   DASSYW010000826 DASSYW010000000
VERSION     DASSYW010000826.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3247)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3247)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3247
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_578477"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..277)
                     /locus_tag="VFN38_13150"
     CDS             complement(<1..277)
                     /locus_tag="VFN38_13150"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HET9012763.1"
                     /translation="MSAEQRREQLLDVTKSLALERGFHAVSIEAVAREAGITRPVVYG
                     HFEDLGGLLEALVDRESRRALAQLATVLPSDLSEGDARDHLFDALRSY"
     gene            380..1894
                     /locus_tag="VFN38_13155"
     CDS             380..1894
                     /locus_tag="VFN38_13155"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: protein motif:HMM:NF012946.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HET9012764.1"
                     /translation="MSTTEETISAVPTEVDVAIVGSGFSGLGTAIKLKQEGFEDFVVL
                     ERAEEVGGTWHYNTYPGCACDVPSHLYSFSFAPNPEWSQTYSPQPEIGAYLKRTAEQF
                     GILPHVRFRTTVTGAAWDEDARRWEIETSGGTIQARVLVAGVGPLAEPKIPDLPGLDK
                     FKGKAFHSARWDHDHDLAGKRVVSIGTGASAIQLVPAIQPEVEKLYVIQRTPPWIFPH
                     SNRPIKDWERRLYRAFPPAQRLVRGAVYVMRESAVLGFVKQPRIMKLAERMAKRHQRR
                     QISDPELLEKVTPDYTIGCKRILPSNKWYPALGKPNVELIAGGIEEIRESSFVDSDGN
                     EHEVDTIIFSTGFQVTDMPVGKAVRGRDGVLLDEAWQGSPRAHLGTAVPGFPNFFMLL
                     GPNTGLGHSSMVYMIESQVAYVLDALRTMRDQGAETVEVRPEAVERYNEKLEEQLDGT
                     VWNTGCASWYLDDTGRNATLWPDWTFTFRRRTARFDQENYEIEAPAREREAVPA"
     gene            1891..2688
                     /locus_tag="VFN38_13160"
     CDS             1891..2688
                     /locus_tag="VFN38_13160"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HET9012765.1"
                     /translation="MSKRVIITGAASGIGAAAAEELRERGARVVGLDRNASGDDIVEC
                     DVRDQESVDRAVAEAISRLGGVDVLINNAGIGLAQSAGEAPDETALAVIDINMIGPWR
                     VTSAALPALREARGRVVNVASGLAFLTVPLSPAYCMSKRGVTAYSDALRLEHGDAISV
                     TTVYPGYIKTPIHEPSREDGFALDGVVPEEPLAAAAGTLVRAALGRPSRDRATTRRGA
                     VNYMLVRRTPGRLMDALTRRFMRRMARRGRFDRSRIARDFVTRLREQ"
     gene            2714..3196
                     /locus_tag="VFN38_13165"
     CDS             2714..3196
                     /locus_tag="VFN38_13165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012766.1"
                     /translation="MAPRLPIPIPLDRLLFMPAEVLSLLRVLPKIAANTDKMERHTAA
                     LEDMTAVLREVSKDTDALPALRKNMEKVADTTSVLEPMDGRMAKIEEAMPVLVEVQQH
                     LSQMPETIEHLDGRIEELNALLERMMSSLESLSTSVDGLQESVGPLGRIAKRLPGQRE
                     "
BASE COUNT          522 a         1158 c         1136 g          431 t
ORIGIN      
        1 ggtagctccg tagcgcgtcg aagaggtggt cgcgcgcgtc gccctcgctg aggtcggacg
       61 gcagcacggt ggcgagctgg gcgagagcac ggcggctctc gcggtccacg agcgcctcga
      121 gcaggccgcc caggtcctcg aaatggccgt acaccaccgg cctcgtgatg ccggcctcgc
      181 gcgccactgc ctcgatcgag acggcgtgga agccgcgctc gagcgcgagc gacttggtca
      241 cgtcgagcag ctgctcgcgg cgctgctcag cgctcatccg gctgcctgtg acccttgtca
      301 cctccatcgc gcacatggat gttacggtac cgtaacttac gggtatgtaa ccggcatggc
      361 ccgccaccga ggaggagcaa tgagcacgac cgaagagacg atctccgcag tgcccaccga
      421 ggtggacgtg gcgatcgtcg gcagcggctt ctccggcctc ggcaccgcca tcaagctcaa
      481 gcaggagggc ttcgaggact tcgtcgtgct cgagcgcgcc gaggaggtgg gcggcacctg
      541 gcactacaac acctaccccg gctgcgcctg cgacgtgccc tcgcacctct actcgttctc
      601 cttcgccccg aaccccgagt ggagccagac ctactcgccc cagcccgaga tcggcgccta
      661 tctcaagcgc accgccgagc agttcgggat cctcccccac gtccgcttcc gcaccaccgt
      721 caccggcgcc gcctgggacg aagacgcccg ccggtgggag atcgaaacct cgggcggcac
      781 gatccaggcg cgcgtgctcg tggccggcgt cggcccgctc gccgagccga agatccccga
      841 cctgcccggc ctcgacaagt tcaagggcaa ggcgttccac tccgcgcgct gggaccacga
      901 ccacgacctg gcgggcaagc gcgtcgtgtc gatcggcacc ggcgcctccg cgatccagct
      961 cgtgccggcg atccagcccg aggtggagaa gctgtacgtg atccagcgaa cgccgccgtg
     1021 gatcttcccc cactcgaacc ggccgatcaa ggactgggag cggcgcctct accgcgcgtt
     1081 cccgccggcg cagcggctcg tgcgcggcgc ggtgtacgtg atgcgcgaga gcgccgtgct
     1141 cggcttcgtc aagcagccgc ggatcatgaa gctcgcggag cgcatggcca agcgccacca
     1201 gcgcaggcag atctccgacc cggagctgct cgagaaggtc acgcccgact acacgatcgg
     1261 ctgcaagcgg atcctgccgt cgaacaagtg gtatcccgcg ctcggcaagc ccaacgtcga
     1321 gctgatcgcc ggcggcatcg aggagatccg cgagagctcg ttcgtcgaca gcgacggcaa
     1381 cgagcacgag gtggacacga tcatcttcag caccggcttc caggtgaccg acatgccggt
     1441 gggcaaggcg gtgcgcgggc gcgacggagt gctgctcgac gaggcgtggc agggcagccc
     1501 gcgcgcgcac ctcggaacgg ccgtgcccgg gttccccaac ttcttcatgc tgctcgggcc
     1561 caacaccggc ctcgggcaca gctcgatggt ctacatgatc gagtcgcagg tggcctacgt
     1621 gctcgacgcg ctgcgcacga tgcgcgacca gggcgccgag accgtggagg tccggcccga
     1681 ggcggtggag cgctacaacg agaagctcga ggagcagctc gacggcacgg tgtggaacac
     1741 gggctgcgcc agctggtacc tcgacgacac aggccgcaac gccacgctgt ggcccgactg
     1801 gaccttcacg ttccgccggc gcacggcccg cttcgaccag gagaactacg agatcgaggc
     1861 gcccgcgcgc gagcgagagg cggtgccggc atgagcaagc gcgtgatcat caccggcgcg
     1921 gctagcggca tcggagcggc cgcggccgag gagctgcgcg agcgcggcgc gcgcgtcgtg
     1981 gggcttgacc gcaacgcctc cggcgacgac atcgtcgagt gcgacgtgcg cgaccaggag
     2041 tcggtggacc gcgccgtggc ggaggcgatc tcgcgcctcg gcggcgtgga cgtgctgatc
     2101 aacaacgccg gcatcggcct ggcgcagagc gccggcgagg cgccggacga gacggcgctc
     2161 gccgtgatcg acatcaacat gatcgggccc tggcgcgtca cctcggcggc gctgccggcg
     2221 ctgcgcgagg cgcgcgggcg cgtcgtgaac gtggcctccg ggctcgcctt cctcaccgtc
     2281 ccgctcagcc cggcctactg catgagcaag cgcggcgtga ccgcctactc ggacgcgctg
     2341 cggctcgagc acggcgacgc gatcagcgtg accaccgtct acccgggcta catcaagacg
     2401 ccgatccacg agccctcgcg ggaggacggc ttcgcgctcg acggcgtcgt gccggaggag
     2461 ccgctggcgg ctgccgcagg cacgctcgtg cgcgccgcgc tcggccgccc gtcgcgggac
     2521 cgggccacca cccgccgcgg cgcggtgaac tacatgctcg tgcggcgcac gcccggccgc
     2581 ctgatggacg cgctcacccg gcggttcatg cgccggatgg cgcgccgtgg caggttcgac
     2641 cgctcgcgga tcgcgcgcga cttcgtcacc cgcctgcgcg agcagtaggc cgaacggtca
     2701 tcatgcgcgc ctgatggcgc cccgcctgcc gataccgatc ccgctcgacc ggctgctgtt
     2761 catgcccgcc gaggtgctct cgctgctgcg cgtgctgccg aagatcgcgg cgaacaccga
     2821 caagatggag cgccacaccg ccgcgctcga ggacatgacc gccgtgctcc gcgaggtgtc
     2881 gaaagacacc gacgcgctcc ccgcgctgcg caagaacatg gagaaggttg ccgacacgac
     2941 gtcggtgctc gaaccgatgg acggccggat ggcgaagatc gaggaggcca tgccggtgct
     3001 ggtggaggtg cagcagcacc tgtcgcagat gcccgagacg atcgagcacc tcgacggccg
     3061 gatcgaggag ctgaacgcgc tgctcgagcg gatgatgagc tcgctcgagt cgctttcgac
     3121 gagcgtcgac gggctccagg agtccgtagg cccgctcggg cggatcgcga agcggctccc
     3181 cggccagcgc gagtagccgc cggttggacg gcggcctgac gatccggccg gagcgcgccg
     3241 acagcga
//
LOCUS       DASSYW010000827         2904 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1722748, whole genome shotgun sequence.
ACCESSION   DASSYW010000827 DASSYW010000000
VERSION     DASSYW010000827.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2904)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2904)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2904
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1722748"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..520)
                     /locus_tag="VFN38_13170"
     CDS             complement(<1..520)
                     /locus_tag="VFN38_13170"
                     /inference="COORDINATES: protein motif:HMM:NF024799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HET9012767.1"
                     /translation="MKALTWATVAFCLTAAGCAKEGAKPAGESARAGTPGAGGKFTIA
                     MIGKSSNNPVFLAARTGAEQAAKDLSAKNNMQIEIAWLTPPQEDGEVQAQRIRQAVND
                     GASAVLIAASDAGKVTGAINDAVDRGVPVMTFDSDAPQSKRFAYYGVDDLKTGQMMMA
                     ELVQQLGGKGRVA"
     gene            complement(682..1734)
                     /locus_tag="VFN38_13175"
     CDS             complement(682..1734)
                     /locus_tag="VFN38_13175"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HET9012768.1"
                     /translation="MRAILHRIVGSQESGLVLVVALVTLSLALLAGSHPDRLTGAAVN
                     NFWNANTLVQTATDASFFAIMAIGATMVIISGGIDLSVGSIYALSGVSMALVLRAMGP
                     AGGASTVAIGLAVCLGVGLLCGLLNGALVVGLRVHPFIITLGSMWILRGIAFVATRAE
                     SIIVPSPLTAVVKAPLGLSSTLYPVPMLTMLAMTLLGSLYLQRTVMGRHIFAFGGNAE
                     ASRFAGLSLSRIQIGVFAVSGLTAGLAAFLGASFYGSASSGDAQGYELYVIASAVVGG
                     ASLIGGKGSALGAMLGALLIVLIRQSIRTLHFDQNYEWIVIGCAIIIAVVVDQWSTRA
                     GARRLSLARETARPAA"
     gene            complement(1848..>2904)
                     /locus_tag="VFN38_13180"
     CDS             complement(1848..>2904)
                     /locus_tag="VFN38_13180"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HET9012769.1"
                     /translation="ISMEPFRAFVADKLVVSQRTAGFVVQSFFIGIGASLANALPFVL
                     SKLGIAGTTASGIPLTVKYSFQIGAVVFLAAVLWTVLSTDEFPPENLEEWERERRAPY
                     RPGDVIREIVSAVREMPATMKQLAVVQVFTWLGLFCMWLFFVPATARHVFGATDPKSA
                     LYTQGIEWGGFAFAFYSITCFLVAFALPRLAARIGRKATHALALCCGAAGLLSLWFIH
                     DRYVLLLTMVGVGIAWASILSMPYALLSTALPARRMGVYMGVFNFFIVIPEIVASLGF
                     GPLIRALFGRDNPNAPLYVVMLGGLSLLVAAACVSLVREVVLIDVPELDVLNADGTER
                     FVIPESAQAVPSTGLTK"
BASE COUNT          487 a          989 c         1036 g          392 t
ORIGIN      
        1 tggccacgcg gcccttgccg ccgagctgct gcaccagctc cgccatcatc atctggcccg
       61 tcttcaggtc atcgacgccg tagtacgcga accgcttgga ctgcggcgcg tcgctgtcga
      121 aggtcatcac cgggacgccg cggtccacgg cgtcgttgat ggcgccggtc accttgccgg
      181 cgtcggacgc ggcgatgagc accgcgctcg cgccgtcgtt caccgcctgc cggatgcgct
      241 gcgcctgcac ctccccgtcc tcctgggggg gcgtgagcca ggcgatctcg atctgcatgt
      301 tgttcttcgc cgagaggtcc ttcgcggcct gctcggcgcc ggtgcgcgcg gcgaggaaga
      361 cgggattgtt ggagctcttc ccgatcatcg cgatggtgaa cttgccgccg gcgccggggg
      421 tccccgcccg tgcgctctcg ccggcgggct tggcgccctc cttcgcgcag ccggcggcgg
      481 tcaggcagaa cgcgacggtc gcccaggtca atgctttcat cgtcggacct ctcctgtggg
      541 gagcttcact tggtgagctt cactgcgtgc gtcgtcttgc ggcgttcgag aagcgcggcg
      601 gcggtgggta cagagtacac ggtaggaggt accgggtacg cggtactccc ccgtgacgct
      661 cctgcacgag gagatcggag gtcacgccgc cggccgcgcg gtctcgcgcg cgaggctcag
      721 ccgccgcgcg ccggcccgcg tgctccactg gtccaccacc acggcgatga tgatcgcgca
      781 cccgatcacg atccactcgt agttctggtc gaagtgcaac gtccggatcg actgccggat
      841 cagcacgatc agcagggcgc cgagcatcgc gcccagcgca ctgccctttc caccgatgag
      901 gctcgccccg ccgaccaccg cggaggcgat gacgtacagc tcgtacccct gtgcgtcgcc
      961 cgaggatgcc gagccgtaga agctggcgcc caggaaggcg gcgagccccg ccgtgagccc
     1021 ggagacggcg aacacaccga tctggatgcg cgagagcgag agcccggcga agcggctcgc
     1081 ctcggcattg ccgccgaagg cgaagatatg gcgccccatc acggtgcgct ggagatagag
     1141 cgaccccagc agcgtcatgg cgagcatggt gagcatcggc accggataca acgtggacga
     1201 caggccgagc ggggccttca ccacggcggt gagcggcgac gggacgatga tgctctccgc
     1261 cctggtggcc acgaaggcga tgccgcgcag gatccacatc gagccgagcg tgatgatgaa
     1321 cgggtgcacc cgcaggccca ccaccagcgc gccgttcagc aggccgcaga gcaacccgac
     1381 gccgaggcag accgccagcc cgatggccac ggtggacgcg ccccccgccg gccccatggc
     1441 ccgcagcacc agggccatgg agacgccgga cagcgcgtag atggatccga cgctcaggtc
     1501 gatgccgccg gagatgatga ccatcgtggc gccgatcgcc atgatggcga agaagctggc
     1561 gtcggtggcc gtctggacca gggtgttggc gttccagaag ttgttcaccg cggcgcccgt
     1621 gaggcggtcg gggtgcgagc ccgccagcag ggcgaggctg agcgtcacca gcgccacgac
     1681 gagcacgaga ccgctctcct gcgatccgac gatccgatgg aggatggcgc gcatggtctc
     1741 cgaggggggc ctgacgggcg gggtgcgggg acgggagaga atacgtcggg aggtgcggcg
     1801 gggtaaggcc gctccggggc gcttcgctta tgggcggggc cgccccgtca cttcgtgagc
     1861 cccgtgctcg gcaccgcctg cgccgactcc gggatcacga accgctccgt cccgtcggcg
     1921 ttcaggacgt ccagctccgg cacgtcgatc aggaccacct cgcgcaccag gctcacgcac
     1981 gccgccgcga cgagcagcga caggcccccg agcatcacga cgtagagggg ggcgttcggg
     2041 ttgtcccggc cgaacagcgc gcgaatgagc gggccgaacc cgagcgacgc gacgatctcg
     2101 gggatgacga tgaagaagtt gaacaccccc atgtacacgc ccatccgccg cgccggcagc
     2161 gcggtggaga ggagggcgta cggcatcgag aggatggacg cccacgcgat ccccacgccg
     2221 accatggtga ggaggagcac gtagcggtcg tggatgaacc agagcgacag gagcccggcc
     2281 gcgccgcagc agagggccag cgcgtgcgtc gccttgcgac cgatgcgcgc cgccagcctg
     2341 ggcagggcga aggcgacgag gaagcaggtg atcgaataga aggcgaacgc gaacccgccc
     2401 cattcgatgc cctgggtgta gagggccgat ttcgggtcgg tggcgccgaa cacgtggcgc
     2461 gccgtggccg gcacgaagaa gagccacatg cagaacagcc cgagccaggt gaagacctgc
     2521 accacggcca gctgcttcat cgtcgccggc atctcgcgca cggccgacac gatctcgcgg
     2581 atgacgtcgc ccgggcggta cggcgcccgc cgctcgcgct cccactcctc caggttctcc
     2641 ggcgggaatt cgtcggtgga gagcaccgtc cagagcaccg cggccaggaa caccaccgcg
     2701 ccgatctgga acgagtactt caccgtgagc gggatgccgc tggccgtggt gccggcgatg
     2761 ccgagcttgc tcagcacgaa gggcagcgcg ttggcgaggc tggcaccgat gccgatgaag
     2821 aaggactgga cgacgaagcc ggcggtccgc tggctcacca ccagcttgtc ggcgacgaag
     2881 gcgcggaagg gctccatcga gatg
//
LOCUS       DASSYW010000828         2725 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_306354, whole genome shotgun sequence.
ACCESSION   DASSYW010000828 DASSYW010000000
VERSION     DASSYW010000828.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2725)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2725)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2725
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_306354"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            172..972
                     /locus_tag="VFN38_13185"
     CDS             172..972
                     /locus_tag="VFN38_13185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012770.1"
                     /translation="MTVTRIVSFAVGAGLMAFAITRFRDPHRTALPFGTADLSSVQRQ
                     LDALPDSERALVVGYVKRSGGDVLPPKFADPDEPLTARTFAEAIALQRRFLAGQAVVD
                     AQVAERRRARDVALAPLRAALEVELVERVIVPRGRMFEIPGAEQSAYGGGTKQVIDDT
                     PILVTTYRVRNAADRAMASLNGRVDVFRAADRRGPAGSGRMGMCFLEHRQSLAPGQTA
                     DIRCANTNKGASADDSAYAAMPAGELVLEWTPMAIVFADGTSLEYRGD"
     gene            1065..1373
                     /locus_tag="VFN38_13190"
     CDS             1065..1373
                     /locus_tag="VFN38_13190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012771.1"
                     /translation="MGTSHAIAVNGSARQLRVWLGVALLVVGLCGHLFAARAIGGHYV
                     AYRDHIFGFFLILAVTGAIVAALGWRLWKGRHDVTLLVIGVIQAIFGIIIYIERFNVH
                     "
     gene            1441..2712
                     /locus_tag="VFN38_13195"
     CDS             1441..2712
                     /locus_tag="VFN38_13195"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HET9012772.1"
                     /translation="MATHDRPSVAPGAAAYTPRSDASPDARPAVRTAYSYESGRSYRL
                     DRLIGQGGFGEVYLATPVPAAGFPAQVCVKISDRLSAWLREAYFAELLLREPRALRVF
                     DRFAIVDGSRMRYCLAMEYAEHGDLGAWLELAGPQPERFVRREIAAILRALDALHRGQ
                     ALHRDLTPFNVFVCKDVQLKLGDFGIATHQFSRRGVTADAFNLFNVPNEIAWGRVRRW
                     QQRDDIYQVGLIAAMLLRGDISSPMRSRDVRALPCSNHLKEVIHRCLGVRGKRYEAAG
                     ELIAALRQRPREVRLGRVQSLEGKRVSFTGFLSRPRSEASAAARRAGAVVQSKPGQST
                     DVLVRGRPNAQQIAGTDGGSKLIEIRRLAAQGHSVTVIGDARFWKLVEPAPPPRTTRG
                     AASVKPRARDGARTAGPASRKSASRPRSTLR"
BASE COUNT          375 a          999 c          980 g          371 t
ORIGIN      
        1 cgcgacgggg agggtgtggg caatcatacg cggccggcgg gcgcggggtt actgcgcggc
       61 tctccccgca acatcggagc gtctggagcg tctctccgga gaggcgccgg acgtccccgc
      121 gcccggcccc gaatggcggc cgccccaccc aatatcgtac caccacggaa cgtgacagtc
      181 acccgaatcg tgagcttcgc cgtcggcgcc ggcctgatgg cgttcgccat caccaggttc
      241 cgcgatcccc atcgcaccgc gctccccttc ggcaccgcgg acctctcctc ggtccagcgg
      301 cagctcgatg cgctccccga ctccgagcgc gcgctcgtcg tcggctacgt caaacgcagc
      361 ggtggcgacg tgctgccgcc caagttcgcc gacccggacg agccgctcac ggcgcgcacc
      421 ttcgccgagg cgatcgcgct gcagcgccgc ttcctcgccg gccaggcggt ggtggacgcg
      481 caggtggcgg agcgccggcg ggctcgcgat gtggcgctcg cgccgctccg cgcggcgctg
      541 gaggtggagc tcgtcgagcg ggtgatcgtg ccgcgcggcc gcatgttcga gattcccggc
      601 gcggagcaga gcgcgtacgg gggagggacc aagcaggtga tcgacgacac gccgatcctc
      661 gtgaccacgt accgcgtgcg gaacgccgcg gaccgcgcga tggcgtcgct gaacgggcgc
      721 gtggacgtct tccgggccgc cgatcgccgc gggccggccg gctccggcag gatgggcatg
      781 tgcttcctcg agcaccgcca gtcgctggcc cccggacaga ccgccgacat ccgctgcgcc
      841 aacaccaaca agggcgcgtc ggccgacgac agcgcgtacg ccgcgatgcc ggcgggggag
      901 ctcgtcctgg agtggacgcc gatggcgatc gtgttcgcgg acggcacgtc gctcgagtac
      961 aggggcgact gagggggacg gaaccgaaac ccggcgtccg tccgcggcgt agaccctggc
     1021 agtcgccaga gctgccgggt gtcctcccca acgacggagc cacgatggga acgtcgcacg
     1081 cgatcgccgt caacggctcg gcccgccagc ttcgcgtctg gctcggggtc gcgctcctcg
     1141 tcgtggggct gtgcggccat ctgttcgccg cccgcgcgat cggcggccac tacgtggcct
     1201 accgggacca catcttcggc ttcttcctca tcctcgccgt gacgggcgcc atcgtcgcgg
     1261 ccctgggctg gcgcctctgg aaggggcggc acgacgtgac gctgctcgtc atcggcgtga
     1321 tccaggcgat cttcggcatc atcatctaca tcgagcggtt caacgtccac tgagccgcgc
     1381 cgcgccttga cggcggggcg aacgcgccgc aactagtagg ctccctccac gggagtgcgc
     1441 atggcgactc acgaccgccc gtccgtcgcg ccgggcgccg cagcatacac gccccggtcg
     1501 gacgccagcc cggacgcgcg gccggcggtg cggacggcgt acagctacga gagcggccgg
     1561 agctacaggc tggaccggct gatcggacag gggggcttcg gcgaggtcta cctcgcgacc
     1621 cccgtcccgg cggccggctt cccggcgcag gtctgcgtca agatcagcga tcgcctgtcg
     1681 gcgtggctcc gcgaggccta cttcgccgag ctcctcctcc gggagccgcg cgcgctcagg
     1741 gtgttcgacc gcttcgcgat cgtcgacggc tcgcgcatgc gctactgcct cgccatggag
     1801 tacgcggagc acggcgacct cggcgcgtgg ctcgagctcg ccggcccgca gcccgagcgc
     1861 ttcgtgcgcc gcgagatcgc cgccatcctt cgggccctcg atgcgttgca tcgaggccag
     1921 gcgctgcacc gcgatctcac gccgttcaac gtcttcgtct gcaaggacgt gcagctcaag
     1981 ctgggcgact tcggcatcgc gacgcaccag ttcagccggc gcggcgtcac cgccgacgcg
     2041 ttcaacctgt tcaacgtgcc gaacgagatc gcctgggggc gggtccgccg ctggcagcag
     2101 cgcgacgaca tctaccaggt ggggctgatc gcggcgatgc tcctgcgcgg cgacatctcg
     2161 agcccgatgc gcagccgcga cgtccgcgcc ctgccgtgca gcaaccatct caaggaggtc
     2221 atccaccgct gcctcggcgt gcgcggcaag cgctacgagg cggccgggga gctgatcgcg
     2281 gcgctccggc agcggccgcg cgaggtgcgg ctcgggcggg tgcagagcct ggaggggaag
     2341 cgcgtctcgt tcaccggctt cctgagccgt ccccggagcg aggcgagcgc cgcggcgaga
     2401 agagcagggg cggtcgtgca gtcgaagccc gggcagtcca ccgacgtgct ggtgcgcggc
     2461 cggcccaacg cgcagcagat cgccggcacc gacgggggct cgaagctgat cgagatccgg
     2521 cgcctcgccg cgcagggaca ctccgtgacc gtgatcggcg acgcacggtt ctggaagctc
     2581 gtcgagccgg cgccgccgcc gcgcacgacc cggggagccg ccagcgtcaa gccacgggcg
     2641 cgtgacggtg cgcgcacggc gggccccgca tcgcgcaaga gtgcgtcgcg cccgcgctcg
     2701 acgctccggt agcgaacctt cggcg
//
LOCUS       DASSYW010000829         3114 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_247127, whole genome shotgun sequence.
ACCESSION   DASSYW010000829 DASSYW010000000
VERSION     DASSYW010000829.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3114)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3114)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3114
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_247127"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..510
                     /locus_tag="VFN38_13200"
     CDS             <1..510
                     /locus_tag="VFN38_13200"
                     /inference="COORDINATES: protein motif:HMM:NF015737.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter domain-containing protein"
                     /protein_id="HET9012773.1"
                     /translation="NDRAGYSLSLGLGGGSSAVSCTGCGTDRTSGASGYLRLGKGYTP
                     SLMLGLELNGWNKTENNVDGRVGMLSAIAQWYPSMTNGFFFKGGAGMGRTTLDDKSAV
                     PSNKLQSTGFGYQVGTGYDIGIARRWSITPYVNYLATAGAKLEMNGVSSSEKFDGNYF
                     QYGLGLSWH"
     gene            654..1049
                     /locus_tag="VFN38_13205"
     CDS             654..1049
                     /locus_tag="VFN38_13205"
                     /inference="COORDINATES: protein motif:HMM:TIGR02605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HET9012774.1"
                     /translation="MPTYEFRCPQGHDFEKFYRTISGAEAQAACPVCGEPAERVMSAT
                     GFAFKGSGFYLTDYGKNAHRDKGTPAPAGGDAAGNGAGDGAKGDAKPDATPAPAASTA
                     APTGDTKPKSASKSAESKAPAPATKKSTE"
     gene            1046..2698
                     /gene="argS"
                     /locus_tag="VFN38_13210"
     CDS             1046..2698
                     /gene="argS"
                     /locus_tag="VFN38_13210"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004814 - arginine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006420 - arginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HET9012775.1"
                     /translation="MSAGADALRAELARAARTLGAPDDVTPLLERPRDPAFGDWATNL
                     AMVLAKPLGQKPRDLATKLIGALDNRAAGLASAEIAGPGFINFRLSADTVAQGIAALV
                     AAGETYGRSDAGHGRPVVVEFVSANPTGPLHVGHGRQAALGDAISALLEWTGWRVSRE
                     FYYNDAGVQIENLAKSTQARVRELAGGTLQIPEGGYHGAYIAEIAERYVAEHPEDRAG
                     NDLDALRRFAVQELRKEQDRDMQAFGVAFDTYYLESSLYSDGRVEKTVRELVASGKTY
                     EKDGALFLRTTEYGDDQDRVMRKSAEKGSGYTYFVPDVAYHETKWERGFRRAINVQGA
                     DHHSTVTRVRAGLQALNIGVPPDYPEYALHQMVTVMKGGEEVKLSKRAGSYVTVRDLI
                     DEVGRDAVRYFFLMRKGDSQLSFDVDLARSQSEENPVYYIQMAHARLAGIFRVGEIDP
                     STVSSDVDFSVLSLPEETELMKALLDFPALVAGAAEALEPHRVATYLHDTAGKIHLWY
                     HKAHVLNEPEPITRARLLLARAAQIVLRNGLTMLGITAPDRM"
     gene            2747..>3114
                     /locus_tag="VFN38_13215"
     CDS             2747..>3114
                     /locus_tag="VFN38_13215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HET9012776.1"
                     /translation="MSVLVVGSVALDSVETPFGKADQVIGGSGTFFSAAASLLTPVQL
                     VGVVGNDYPMDQLEALATRGVDLAGLEHATGESFRWRGRYRHDLNSAETLETRLGVFS
                     HFSPKIPSQFKSAPFVFLAN"
BASE COUNT          513 a         1057 c         1081 g          463 t
ORIGIN      
        1 aatgatcgcg ccggctacag cctgagcctc ggcctcggcg gcggctcgag cgcggtgtcc
       61 tgcacggggt gcggcaccga ccgcaccagc ggcgcgtcgg gctacctgcg cctcggcaag
      121 ggctatacgc ccagcctcat gctcggtctc gagctgaacg gctggaacaa gaccgagaac
      181 aacgtcgacg gtcgcgtcgg catgctcagc gccatcgcgc agtggtatcc gagcatgacg
      241 aacgggttct tcttcaaggg tggcgccggc atggggcgta cgacgctcga cgacaagtcg
      301 gcggtgccct cgaacaagct gcagtcgacg ggcttcggct atcaggtcgg cacgggctac
      361 gacatcggca tcgcccgccg ctggtcgatc acgccgtatg tgaactacct cgcgacggcc
      421 ggggcgaagc tcgagatgaa tggcgtgtcg tcgagcgaga agttcgacgg gaactacttc
      481 cagtacgggc ttggcctgag ctggcactaa gttccgctgc acggaacggc tgcggcgctc
      541 cgcgaggggc gccgcagctt ttttcatggc cgcatccgca cgtcgggctt gtagcgaccg
      601 ccgcgtccgg ctagctttcc cgcttcggaa tgcttcgcct aagtctcata tcgatgccaa
      661 cttacgagtt ccgctgtccg cagggccacg acttcgagaa gttctatcgg acgatcagcg
      721 gcgctgaggc ccaggctgcc tgtcccgtct gcggcgagcc ggccgagcgt gtgatgtcgg
      781 ccacgggctt cgcgttcaag ggatcggggt tctacctcac ggattacggc aagaacgcgc
      841 atcgcgacaa gggcacgccg gcgccagcgg gtggcgacgc cgcggggaat ggcgccggcg
      901 acggcgccaa gggcgacgcc aagcccgatg cgactcccgc gccggccgcg tcgaccgccg
      961 cgcccacggg cgacacgaag ccgaagagcg cgtccaagtc tgcggagtcg aaggcgcccg
     1021 cgccggccac caagaagagc accgagtgag cgccggcgcc gatgcgttgc gcgcggagct
     1081 ggcgcgcgcg gcgcgcacgc tcggggcgcc ggacgacgtg acgccgctgc tcgaacggcc
     1141 gcgggacccg gcattcgggg actgggccac caacctcgcg atggtcctcg ccaagccgct
     1201 ggggcagaag ccgcgcgacc tcgccacgaa gctgatcggg gcgctggaca accgcgccgc
     1261 cgggctcgcg tcggcggaga tcgcggggcc gggcttcatc aacttccggc tcagcgccga
     1321 caccgtcgcg caggggatcg cggcgctcgt cgccgccggc gagacgtacg gccgctccga
     1381 cgccgggcat ggacggcccg tcgtcgtgga gttcgtgagc gcgaacccca cggggccgct
     1441 gcacgtggga cacggccgcc aggcggcgct gggcgacgcg atctccgcgc tgctcgagtg
     1501 gacgggctgg cgcgtgtcgc gcgagttcta ctacaacgac gccggcgtgc agatcgagaa
     1561 cctggcgaag agcacgcagg cgcgcgtgcg cgagctcgcc ggtggaacgc tgcagatccc
     1621 ggaaggggga tatcacggcg cgtacatcgc cgagatcgcc gagcgctacg tggccgagca
     1681 tccggaggat cgcgcgggga acgacctcga cgcgctgcgc cgcttcgccg tgcaggagct
     1741 gcgcaaggaa caggaccgcg acatgcaggc gttcggcgtc gccttcgaca cgtactacct
     1801 ggaatcgtcg ctgtattcgg acggccgcgt cgagaagacg gtgcgggagc tcgtcgcgag
     1861 cggcaagacg tacgagaagg acggcgccct cttcctccgc acgacggagt acggcgacga
     1921 ccaggatcgc gtcatgcgca agagcgccga gaagggcagc ggctacacgt atttcgtgcc
     1981 cgacgtcgcg tatcacgaga cgaagtggga gcgcggcttc cgccgtgcga tcaacgtgca
     2041 gggcgccgat catcacagca cggtgacgcg cgtgcgggcg ggcctgcagg cgctgaacat
     2101 cggcgtgccg ccggattatc ccgagtacgc gctgcaccag atggtgacgg tgatgaaggg
     2161 gggcgaggag gtgaagctct ccaagcgcgc cggcagctac gtcaccgtgc gcgacctgat
     2221 cgacgaagtg ggccgcgacg cggtgcgcta cttcttcctg atgcggaagg gcgactcgca
     2281 gctgtcgttc gacgtcgacc tcgcgcggtc gcagagcgag gagaatccgg tctactacat
     2341 ccagatggcg cacgcccgcc tcgcgggaat cttccgcgtc ggcgagatcg atccgtcgac
     2401 ggtgtcgagc gacgtggact tctccgtgct gtcgctgccg gaagagacgg agctgatgaa
     2461 agcgctgctc gactttcccg cgctcgtcgc cggtgctgcc gaagcgctgg agccgcatcg
     2521 cgtcgccacc tacctgcacg acacggcggg gaagatccat ctctggtacc acaaggcgca
     2581 cgtgctgaac gagcccgagc cgatcacccg tgcgcgcctg ctgctcgctc gcgccgcgca
     2641 gatcgtgctg cgcaacggcc tcacgatgct cggcatcacg gcgccggaca ggatgtagcg
     2701 ttccacgtcc cacgtcccac gcaccacgtc ccacattctc ccttcaatgt ccgtactcgt
     2761 cgtcggctcc gtcgcgctgg actccgttga aacgccgttc ggcaaggccg atcaggtcat
     2821 cggtgggtcc ggcaccttct tctcggcggc tgccagcctg ctcaccccgg tgcagctcgt
     2881 cggcgtggtc ggcaacgact atccgatgga ccagctcgag gcgctcgcca cgcggggcgt
     2941 cgacctcgcg gggctggagc acgccacggg cgaatcgttc cgctggcgcg gccgctaccg
     3001 gcacgacctc aactcggccg aaacgctcga gacgcggctc ggcgtcttct cgcacttcag
     3061 cccgaagatc ccgtcgcagt tcaagagcgc gcccttcgtc ttcctcgcga acat
//
LOCUS       DASSYW010000830         3801 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_437227, whole genome shotgun sequence.
ACCESSION   DASSYW010000830 DASSYW010000000
VERSION     DASSYW010000830.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3801)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3801)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3801
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_437227"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..207
                     /locus_tag="VFN38_13220"
     CDS             <1..207
                     /locus_tag="VFN38_13220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012777.1"
                     /translation="VPTLVIHGERDALPAAVALELSELLPRARLALLPGAGHMPFWEA
                     PARFFDAAGSFLAAPSTGPPRTSP"
     gene            204..938
                     /locus_tag="VFN38_13225"
     CDS             204..938
                     /locus_tag="VFN38_13225"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF012630.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031012 - extracellular matrix [Evidence
                     IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="matrixin family metalloprotease"
                     /protein_id="HET9012778.1"
                     /translation="MMQSRSRRRARFVAAVTLALLPLSGAVRVPTARTSVASGGVVAN
                     PLTRRAAEREAVKAEVRRRLAERGSGTYIGEMLTERDSALARWPDRSGRPLMIWIQPA
                     SGIEDWTDGYVNSVRDAIADWDALELPVRFSFAYDSASADVHVTFIDQFEEAISGRPK
                     WERDDSWWITNADIVLAVHHRRGPALDEDAMRALALHEVGHLLGLDHTEDATSIMAPR
                     VRVRGLSTADRATVRLLYTLPPGGVR"
     gene            1070..1717
                     /locus_tag="VFN38_13230"
     CDS             1070..1717
                     /locus_tag="VFN38_13230"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF012630.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031012 - extracellular matrix [Evidence
                     IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="matrixin family metalloprotease"
                     /protein_id="HET9012779.1"
                     /translation="MTTEQRALGVMRRGVGPVDAQKTSPAELRRRVANLASGTYGDDI
                     LAEQDSALYRWPERLRDAMRVYIEPSSDVAGFDTRYPAMARDVFDEWSAAGFPLRFAF
                     VLDSGGADIAIHWRDRFPESDGQRIGVTERIQSSDFQIARASILIALRDSVGRTLAPS
                     VVVGIVRHEVGHALGLNHANDSTSVMYREAATMTISASDRATLRLLYLVPGGSLR"
     gene            1771..2766
                     /locus_tag="VFN38_13235"
     CDS             1771..2766
                     /locus_tag="VFN38_13235"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HET9012780.1"
                     /translation="MSEAAGRKREAQAKDERRTTDQPFDVAIIGGGPAGLSAGVWLSR
                     YLHRVLLVDSGDPRNWETRGINGFLGHPGIRPAELRGLGRDEARRHGVELVDAMCETV
                     AKLSDECFSLVLTGGATYLARRLLLAIGLKDVWPDIPGLEHVYGSTAHVCPDCDGRDC
                     AGKKVVVIGKGRKAVGMALNLTTWTREIIICTNGEPPDFDLPEYCEKLDALNIPVIQA
                     PVTCISHSGSRVHSLEFEDGMSLDTDKIFLAVAQYPADDLGAQLRCERDAGGHIIVDD
                     SYHTSVLNCFAAGDIVPGPQLAIAAAGDGAIAALAIHKSLVPDARKLEKLETVEY"
     gene            complement(2773..>3801)
                     /locus_tag="VFN38_13240"
     CDS             complement(2773..>3801)
                     /locus_tag="VFN38_13240"
                     /inference="COORDINATES: protein motif:HMM:NF024578.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HET9012781.1"
                     /translation="DGEDLSIAQRRSLGDELDRTVGQIEELARRMAQLDSRLVRVQVQ
                     VAPMVDERNAMAMSNALRQAQESQVAMPRGWLGIVVSGTARDPRIDNGELIIRYLTHP
                     VIVSVEPSSPAEKAGLIPSDTLIAYDGRDVRDRDISITRLLRPNSRVLVRIRRDGRTK
                     DVPVTIADVPSRIRLRSETDFVLRAPRAEPALPGGMAFPRSSVPVAALAPRASTVPPA
                     MPMPPMPAIAPLPPQAVTPGMIVTIGLNGVAGAQLAALTDGLARAVGVRSGLLVTSAA
                     IGSPAYTSGLRDGDVIVRVGGDPVRTVAELREQVRRAVENGENSVKLDCVRDRRERTV
                     LLRWNDDR"
BASE COUNT          546 a         1405 c         1301 g          549 t
ORIGIN      
        1 gtccctacgc tcgtcattca tggtgaacgg gacgcgctcc ccgcggccgt cgctctcgag
       61 ctttccgagc tgctgcctcg cgcgcgtctc gccctcctcc cgggcgccgg ccacatgccg
      121 ttctgggaag cgcccgcgcg cttcttcgac gcagccggct ccttcctcgc cgctccctca
      181 accgggccgc cgcgaacgtc gccatgatgc agagtcgctc ccgccgtcgc gcgcgcttcg
      241 tcgccgcagt cacgctcgct ctcctgccgc tctcgggcgc cgtgcgggtc cccaccgccc
      301 ggacgagcgt ggcgagcggc ggcgtggtcg ccaatccgct cacgcgccga gcggccgagc
      361 gcgaggcggt gaaggcggaa gtgcgacgcc ggctggccga gcgcggcagc gggacgtaca
      421 tcggcgagat gctgacggag cgcgatagtg cgttggcccg gtggcccgat cgcagcggac
      481 gtcccctcat gatctggatc cagccggcga gcgggatcga ggactggacg gacggatacg
      541 tgaacagcgt gcgcgacgcc atcgccgact gggacgccct cgagctgccc gtgcgcttct
      601 ccttcgcgta cgactcggcg agcgccgacg tgcacgtcac cttcatcgat cagttcgagg
      661 aggcgataag cggccgcccg aagtgggagc gcgacgacag ctggtggatc accaacgccg
      721 acatcgtgct cgccgtgcac catcgtcgcg ggccggcgct ggacgaggac gcgatgcgtg
      781 cgctcgcgct ccacgaggtc ggccatctgc tcggcctcga ccacacggaa gacgccacga
      841 gcatcatggc gccgcgggtc agggtgcgcg ggctctccac cgccgatcgc gcgaccgtgc
      901 gcctcctcta caccctcccg ccgggcggcg tccgctgagc cgactcaagc cggagggtgt
      961 cctcgtcctc ctgctcgtcg cgctcggcgg cctggtcgcg acgaacaccc tgcgccaagc
     1021 gcgcgatcgc cgcgcccggc gcgccgccgc cctcgcgcgc gacaccgccg tgaccaccga
     1081 gcagcgcgcc cttggcgtga tgcgccgcgg cgtcggcccg gtcgacgcgc agaagacgtc
     1141 ccccgccgag ctgcgccgcc gcgtggccaa cctcgcgagc gggacatacg gcgacgacat
     1201 cctcgccgag caggacagcg cgctctatcg gtggccggaa cggcttcgcg acgcgatgcg
     1261 cgtctacatc gaaccgtcgt ccgacgtggc agggttcgac acgcgctacc cggcgatggc
     1321 gcgcgacgtg ttcgacgaat ggagcgcggc cggctttccg ctgcgcttcg ccttcgtgct
     1381 cgactccggc ggcgccgaca tcgccatcca ttggcgggat cgctttccgg aatcggacgg
     1441 ccagcgcatc ggcgtcacgg aacgcatcca gtcgagcgat ttccagatcg cccgcgccag
     1501 catcctgatc gccctgcgcg acagcgttgg ccgcacgctg gcgccatcgg tcgtggtcgg
     1561 catcgtccgc cacgaggtgg ggcatgcgct cggcctcaat cacgccaacg actccacgag
     1621 cgtgatgtat cgcgaggcgg ccacgatgac catctccgcg tcggatcggg ccacgcttcg
     1681 gctgctgtac ctcgtccccg gcggctcgct gcgctagctc cctcgcgcct gccgcgcgta
     1741 cggaatcctt cttgccctcg cagccttccc atgagcgagg cggccggacg gaagcgggag
     1801 gcgcaagcga aggacgagcg gcggaccacc gaccagccgt tcgacgtcgc catcatcggc
     1861 ggcggaccgg cggggctgag cgccggagtc tggctgtcgc gctacctcca ccgcgtgctg
     1921 ctcgtcgatt cgggcgaccc ccgcaactgg gaaacgcgcg gcatcaacgg ctttctcgga
     1981 cacccgggca tccggccggc cgagctgcgc ggtctggggc gcgacgaggc acgacggcac
     2041 ggcgtcgagc tcgtggatgc catgtgcgag acggtcgcga agctcagcga cgaatgcttt
     2101 tcgctcgtgc tgaccggggg ggcaacctac ctcgcgcgcc gactgctgct cgccatcggg
     2161 ctcaaggacg tgtggccgga catccccggg ctggagcacg tctacgggtc gacggcgcac
     2221 gtctgccccg actgcgacgg ccgggactgc gccggcaaga aggtcgtcgt gatcggcaag
     2281 gggaggaagg cggtcgggat ggcgctcaac ctgaccacct ggacgcggga gatcatcatc
     2341 tgcacgaacg gcgagccgcc cgacttcgac cttccggagt actgcgagaa gctcgacgcg
     2401 ctcaacatcc cggtgatcca ggcgcccgtc acctgcatct cgcacagcgg gtcgcgggtt
     2461 cactcgctgg agttcgagga cggcatgtcg ctcgacacgg acaagatctt tctcgccgtg
     2521 gcccagtacc ccgccgacga cctcggcgcc cagctccgct gcgaacgcga cgccggcggt
     2581 cacatcatcg tcgacgactc ctaccacacg tcggtgctga attgcttcgc cgcgggcgac
     2641 atcgtgccgg gaccgcagct cgcgatcgcg gccgcgggcg acggagcgat cgccgccctg
     2701 gcgatccaca agtcgctcgt gcccgacgcg cgaaagctcg agaagctgga gacggtggag
     2761 tactgagcgc cgtcagcggt cgtcgttcca gcggagcagc accgtgcgct ccctgcgatc
     2821 gcgcacgcag tcgagcttca cgctgttctc cccgttctcc accgcccgac gcacctgctc
     2881 ccgcagctcg gcgacggtgc gcaccggatc gccgccgacg cgcacgatga cgtcgccgtc
     2941 ccgaagcccg gacgtgtacg cgggtgagcc gatggcggcg gaggtgacga gcagcccgct
     3001 ccgcacgccg accgcgcgcg ccaacccgtc ggtgagcgcg gccagctgtg cgccggcgac
     3061 gccgttgagc ccgatcgtga cgatcatgcc gggagtcacc gcctgcggcg gcagaggtgc
     3121 gatcgcgggc atcggcggca tgggcatcgc cggaggcacc gtcgacgcgc ggggcgccag
     3181 cgccgccacc gggacgcttg accggggaaa ggccatcccg ccgggaaggg ccggctcggc
     3241 acgcggcgcg cgcaggacga aatcggtctc gctgcgcagg cggatccgcg acggcacgtc
     3301 ggcgatcgtc acgggcacgt ccttcgtgcg gccgtcacgg cggatgcgca ccagcacgcg
     3361 cgagttcgga cgcagcagcc gcgtgatcga gatgtcgcgg tcgcgcacgt cccggccgtc
     3421 gtacgcgatc agcgtgtcgc tcgggatcag ccccgccttt tcggcgggcg agctcggctc
     3481 gaccgagacg atgaccggat gcgtcaggta ccggatgatc agctctccgt tgtcgatgcg
     3541 cggatcgcgg gccgtaccgg agaccacgat gccgagccag ccccggggca tggcgacctg
     3601 gctctcctgc gcctgccgca gcgcgttgct catcgccatc gcgttgcgct cgtccaccat
     3661 cggcgccacc tgcacctgaa cgcgcaccag acgcgagtcc aactgtgcca tccggcgcgc
     3721 cagctcctcg atctgcccga ccgttcgatc gagctcgtcc ccgaggctgc gccgctgcgc
     3781 gatgctcagg tcttcgccgt c
//
LOCUS       DASSYW010000831         2205 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_175487, whole genome shotgun sequence.
ACCESSION   DASSYW010000831 DASSYW010000000
VERSION     DASSYW010000831.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2205)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2205)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2205
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_175487"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..483)
                     /locus_tag="VFN38_13245"
     CDS             complement(<1..483)
                     /locus_tag="VFN38_13245"
                     /inference="COORDINATES: protein motif:HMM:NF024854.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family winged helix-turn-helix
                     transcriptional regulator"
                     /protein_id="HET9012782.1"
                     /translation="MTRSSAQSPQSDSHDGDVAPVFDSLRRLVHSLHNASRDTERRLG
                     VTGAQLFVLTQLRATPALSVNALAERTMTHQSTVSVVVRRLVARKLVKKTRAADDARR
                     VELTLTPAGTALLRRAPEAMQLRLARAIGELPTRDRRALGRGLQRLVRELGADAKPAP
                     M"
     gene            669..>2205
                     /locus_tag="VFN38_13250"
     CDS             669..>2205
                     /locus_tag="VFN38_13250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012783.1"
                     /translation="MRRSIIPLLGVLIAGTLSPRAAAAQQLDSTLLSSFRWRPIGPAN
                     MGGRITDVEGIPSPSKTFYVAAAAGGVWKTTNAGTTFRPVFDDERVASLGDLAIAPSD
                     TNVVYLGTGEEDSRNSISPGGGVWKSTDGARTWKFMGLAETQQIGRIVVDPRNANVVY
                     VAALGHTWGPNRERGLYKSTDGGATWQLVKFVSDKAGFVDVQLDPGNPDVVWASSWER
                     VRGPYFLYSGGPGSALWKSTDAGRTWSEVKGGGLPETTKGRMNFDISRSNPKMIYAMI
                     EADTVMTGKSDKSVKAQVRPSGLYRSVDGGVTWEKRNAANVRPFYYSQVRVDPVNPER
                     VYFTSTPVLFSDDGGKTARTATQGIHVDHHAMWIDPKDPEHFIVGNDGGVAQTWDRGG
                     NYDFINTLPLGQFYAISFDMAIPYNVCGGLQDNGSWCGPSRRRQGPVTNAMWFNVGGG
                     DGFYTAQDPDDPSTVYAESQGGNMSRVNIATGERTPLGKPSWRNRYRQFEDSIIVARG
                     DTTR"
BASE COUNT          357 a          776 c          784 g          288 t
ORIGIN      
        1 catcggtgcc ggcttcgcgt cggcgcccag ctcgcgcacc agccgctgga gcccccgccc
       61 gagcgcgcgg cggtcgcgcg tgggcagctc cccgatggcg cgcgcgaggc gcagctgcat
      121 cgcctcgggc gcgcgccgga gcagggccgt ccccgccggc gtgagcgtca gctccacgcg
      181 ccgcgcatcg tcggcggcgc gggtcttctt caccagcttg cgcgccacga ggcggcgcac
      241 caccaccgac accgtgctct gatgcgtcat ggtgcgctcg gcgagcgcgt tgacggagag
      301 cgcgggggtc gcgcgcagct gggtgaggac gaacagctgc gcgcccgtca cccccaggcg
      361 gcgctcggtg tcgcgcgagg cgttgtgcag cgagtgcacg agacgccgca gcgaatcgaa
      421 caccggcgcc acgtcgccgt cgtgggagtc tgactgcggc gattgggcgg aggaacgggt
      481 catccccgaa aatcggcaga agcgcggaga gagtccatgc ctgcggcagg attcccggcg
      541 gcggcacacg ccgcgctcgc ccggtccact gcctcgggag gccgcctccg cgctccaccc
      601 ccgtcaacga tggtcgggga ccgaccgtat gcgtaccgta gtcttcccgc tcaccccaag
      661 actcgcccat gcgtcgctcg atcatccccc tgctcggcgt cctgatcgcc ggcaccctgt
      721 cgccgcgcgc cgcggcggcg cagcagctcg actccaccct gctctcttcg ttccgctggc
      781 gccccatcgg gccggccaac atggggggcc gcatcaccga cgtggagggc atcccctcgc
      841 cgtccaagac cttctacgtc gcggcggcgg cgggcggcgt ctggaagacc accaacgccg
      901 gcaccacctt ccggccggtg ttcgacgacg agcgcgtcgc ctcgctcggc gacctcgcga
      961 tcgcgccgag cgacacgaac gtcgtgtacc tcggcaccgg cgaggaggac tcgcgcaact
     1021 ccatctcgcc gggcggcggc gtatggaagt cgaccgatgg cgcgcgcacc tggaagttca
     1081 tggggctcgc cgagacccag cagatcgggc ggatcgtcgt ggatccgcgg aacgcgaacg
     1141 tggtgtacgt cgccgcgctc ggccacacgt gggggcccaa cagggagcgc gggctgtaca
     1201 agagcaccga cggcggcgcc acctggcagc tcgtgaagtt cgtgagcgac aaggcgggat
     1261 tcgtcgacgt gcagctcgac ccgggcaacc ccgacgtcgt gtgggcgtcg agctgggagc
     1321 gggtgcgcgg accctacttc ctctacagcg gcggcccggg ctcggccctc tggaagtcca
     1381 ccgacgccgg gaggacgtgg agtgaggtga aggggggcgg cctgcccgag acgacgaagg
     1441 gacgcatgaa cttcgacatc tcgcggagca acccgaagat gatctacgcc atgatcgagg
     1501 cggacacggt catgaccggg aagagcgaca agagcgtgaa ggcgcaggtc cgcccgtcgg
     1561 ggctgtaccg ctcggtggac ggcggcgtga cgtgggagaa gcgcaacgcc gccaacgtac
     1621 gccccttcta ctactcgcag gtccgcgtgg accccgtcaa tcccgagcgc gtgtacttca
     1681 cctcgacgcc ggtgctgttc agcgacgacg gcgggaagac ggcgcgcacc gccacgcagg
     1741 ggatccacgt cgaccaccac gcgatgtgga tcgacccgaa ggatcccgag cacttcatcg
     1801 tcggcaacga cggcggcgtc gcgcagacgt gggaccgggg aggcaactac gacttcatca
     1861 acaccctgcc gctcggccag ttctacgcca tctcgttcga catggccatc ccgtacaacg
     1921 tgtgcggcgg gctccaggac aacgggagct ggtgcgggcc gagccggcgg cggcagggac
     1981 cggtgaccaa cgcgatgtgg ttcaacgtgg gcgggggcga cggcttctac acggcgcagg
     2041 atcccgacga cccgagcacg gtgtacgccg agtcgcaggg gggcaacatg agccgggtga
     2101 acatcgcgac gggagagcgc acgccgctcg gcaagccgag ctggcgcaac cgctaccggc
     2161 agttcgagga ctccatcatc gtcgcgcgcg gcgatacgac gcgcc
//
LOCUS       DASSYW010000832         3913 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_99794, whole genome shotgun sequence.
ACCESSION   DASSYW010000832 DASSYW010000000
VERSION     DASSYW010000832.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3913)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3913)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3913
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_99794"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1451)
                     /locus_tag="VFN38_13255"
     CDS             complement(<1..1451)
                     /locus_tag="VFN38_13255"
                     /inference="COORDINATES: protein motif:HMM:NF018455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase domain-containing protein"
                     /protein_id="HET9012784.1"
                     /translation="MSDEVREAINEANSKMAPTGIAGFDDVLGGGLQRRRLYLVEGVP
                     GSGKTTLALQFLLTAVARGEGVLYVTLSETLEELNSVAASHGWSLDGVLVHEMMPTEG
                     VLDPDEQSTMFHPSEIELAQTTRSILADVDRHNPTCVVIDSLSELRMLSGSPLRYRRQ
                     ILALKQYFASRGCIVILLDDMTGADEPDVQVQSIVHAVVRLEQLNPEYGSDRRRMRIV
                     KYRAQDFRGGYHDYCIRRGGLQVFPRLVAAEHRQELSRGKLESGIRELDALMGGGIEQ
                     GTSTLFVGAAGTGKSTLAAQFAAAAASRGQHAACFIFDESTATLLTRTEQLGIPLAEG
                     VQKGLVTIRPVDPAEFSPGELVHQVRLAVERDNAVLVVIDSLNGYLNAMPGERHLAIQ
                     LHELLAYLSQRNVATILVAAHQGLIGQMTVTVDATYLADAVVLLRFFESRGEIRQALS
                     VVKKRGGSHERTIREFGFENGAIKVGEALRKFRG"
     gene            complement(1600..2382)
                     /locus_tag="VFN38_13260"
     CDS             complement(1600..2382)
                     /locus_tag="VFN38_13260"
                     /inference="COORDINATES: protein motif:HMM:NF036686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0036361 - racemase activity, acting on
                     amino acids and derivatives [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/glutamate racemase family protein"
                     /protein_id="HET9012785.1"
                     /translation="MTHSRRDFLAASIAVALAARRASAADPVLGLIFPPKDYPVPPEA
                     TRLYPTGVKFLSRGIGLERLTPEGYDAAIPKVIPAAESLVRDGATAISVMGTSLTFYK
                     GRAFNENLTAQVKKATGVPVTTMSTGIVDGLRAAKARRIAVATAYNVEVTDRLKAFLE
                     EYGFQVLNAKGLGYEQIPAGGDIIDNRLSEFCAETFESARGADTLLISCGGLKTLDLI
                     VPLETRCKVPVVSSTPHALMASVRLAGLSGRARGFGRVLERI"
     gene            complement(2379..3596)
                     /locus_tag="VFN38_13265"
     CDS             complement(2379..3596)
                     /locus_tag="VFN38_13265"
                     /EC_number="1.1.5.-"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016901 - oxidoreductase activity, acting
                     on the CH-OH group of donors, quinone or similar compound
                     as acceptor [Evidence IEA];
                     GO_function: GO:0070968 - pyrroloquinoline quinone binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HET9012786.1"
                     /translation="MRALVATSVQAGVVVALMLTAASEVWTQRGAPIGVPRAALGDGP
                     WVLDTAEQHKIKVSIVAGGLANPWSLAWLPNGDMLITERPGRLRLLRKDGVLEPTPIS
                     GVPAVKAQRLSGLMDVVLHPRFAENRLVYLTYNKGRADGMLATVLARGRLDGMALTDV
                     KDLFVAEPWWDGAGGSASRIVFGRDGMLYMTTGSGGGANFAQGQEKNIHKGKILRLRD
                     DGTVPKDNPFVNDASFRPEIYTWGHRNSLALIVHPVTGELWNSENGPNGGDEVNIIKG
                     GKNYGWPAVSMGRSYEGPWQGRFEKDGMEGPLVYWMPAVAAAGMAIYTGDRFPAWKNN
                     LFIGAMRVGEIPNTGHLERVVFNEKTEEIRRESLLWELRQRIRDVRQGPDGLLYLLTD
                     ENPGALLKIEPSV"
     gene            complement(3608..>3913)
                     /locus_tag="VFN38_13270"
     CDS             complement(3608..>3913)
                     /locus_tag="VFN38_13270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012787.1"
                     /translation="DNNTFGASSPGISVAAGEWLASKEVVVVGSDNWGVEAFPNADPN
                     LTAPVHQLLLAKNGIYLHENLATEVLARDNVYEFAYVFAPLRLKGATGSPGNPIAIR"
BASE COUNT          618 a         1357 c         1287 g          651 t
ORIGIN      
        1 ccgcggaact tgcgcagcgc ttcccccact ttgatggcgc cgttctcgaa cccgaactcc
       61 cggatggtcc gctcgtggct gccgccgcgc ttcttcacga ccgagagcgc ctgccggatc
      121 tccccgcgcg attcgaagaa gcgcaggagc acgaccgcgt ccgccaggta ggtggcgtcc
      181 acggtcaccg tcatctggcc gatgaggccc tggtgcgcgg cgaccagaat ggtggccacg
      241 ttgcgctgcg acagatacgc cagcagctcg tgcagctgga tggcgaggtg gcgctcgcca
      301 ggcatggcgt tgagataccc gttgaggctg tcgatcacga cgagcacggc gttgtcacgt
      361 tcgacggcga gccgcacctg gtgcacgagc tcacccggcg agaactcggc cggatccacc
      421 ggccgtatcg tgacgagccc cttttggacg ccctccgcaa gcgggatccc gagctgctcc
      481 gtcctcgtga ggagcgtcgc ggtggactcg tcgaagatga agcatgcggc gtgctggccg
      541 cgcgaggcgg ccgcggcggc aaactgcgcc gccagcgtgg atttgcccgt gccggcggcg
      601 ccgacgaaca gcgtgctggt cccctgctcg atccctccgc ccatcagcgc gtcgagctcg
      661 cggatgccgc tctccagctt cccgcgcgac aactcctgcc ggtgctctgc ggccaccagt
      721 cgtggaaaca cctgcagccc accgcgcctg atgcagtagt cgtgatagcc gccgcggaaa
      781 tcctgcgcgc ggtacttcac gatcctcatc cgccggcgat cgctgccgta ctcggggttc
      841 agctgctcga gccgcacgac cgcgtgcacg atgctctgca cctgcacgtc gggctcatcg
      901 gctcccgtca tgtcgtcgag cagaatcacg atgcagccgc gcgacgcgaa atactgtttg
      961 agcgcgagga tctggcgacg gtagcgcagg gggctgcccg acagcatgcg cagctccgac
     1021 agcgaatcga tgacgacgca ggtcgggttg tggcgatcca cgtcggcgag aatcgagcgg
     1081 gtagtctgcg ccagctcgat ttcggacggg tgaaacatcg tggactgctc gtcggggtcc
     1141 agcacgccct cggtgggcat catctcgtgc acgaggacgc cgtcgagcga ccagccgtgc
     1201 gaggccgcca ccgagttcag ctcctcgagc gtctccgaca gcgtcacgta caggaccccc
     1261 tcgccgcgcg cgacagcggt caggagaaac tgcagcgcca gcgtggtctt gccggaaccc
     1321 ggtacaccct cgacgagata gagccgccgc cgctgcagac cgccgccgag gacgtcgtcg
     1381 aaccccgcga tccccgtggg agccatcttg ctgtttgcct cgttgatcgc ctctctaacc
     1441 tcgtccgaca tccgtcgctc cccggcggca gcgcgttcgc ccgacgcgaa cgtcgcacgc
     1501 gctcagggta tcaacagcaa agattgatcc gggataaaac cagacgcgac tctgctgttg
     1561 tcgaggcggt cgagctggtt ttcggcgaac gacggccgtc tagatgcgct cgagcacgcg
     1621 cccgaagccg cgggcgcggc ccgagagtcc cgcgaggcgc acgctcgcca tcaacgcgtg
     1681 cggcgtgctc gacacgaccg gcaccttgca gcgcgtctcg agcggcacga tgagatcgag
     1741 cgtcttcaag ccgccgcacg aaatcagcaa cgtgtcggcg cccctggcgc tctcgaacgt
     1801 ctcggcgcag aactcgctca gccggttgtc gatgatgtcg ccgccggcgg gaatctgctc
     1861 gtagccgagc cccttggcat tgagcacctg gaagccgtat tcctcgagga acgccttcag
     1921 ccgatcggtc acctcgacgt tgtacgcggt ggccaccgcg atgcggcgtg ccttggcggc
     1981 gcgcagtccg tccacgatgc cggtgctcat cgtcgtcacc ggcacgccgg tggccttctt
     2041 cacctgggcg gtcaggttct cgttgaacgc gcgccccttg tagaacgtca gcgacgtgcc
     2101 catcaccgag atcgccgtcg cgccgtcgcg caccagcgac tcggcggccg gaatgacctt
     2161 cgggatggcc gcgtcgtacc cctcgggcgt caaccgctcg aggccgatgc cgcgcgacag
     2221 gaacttcacg ccggtgggat agagccgcgt ggcttcgggc ggcaccggat agtccttcgg
     2281 cggaaaaatc agaccgagga ccggatccgc ggcggatgca cggcgcgccg cgagggcaac
     2341 ggcgatcgac gcggcaagga agtcacgacg tgagtgcgtc atacgcttgg ctcgatcttg
     2401 aggagggccc cggggttttc gtcagtcaga agatacagga gcccgtcggg gccctgccgg
     2461 acgtcgcgaa tacgctggcg cagttcccag agcaggctct cccggcggat ttcttcggtc
     2521 ttctcgttga agacgacacg ctcgagatgg ccggtgttcg ggatctcgcc cacgcgcatg
     2581 gcgccgatga acagattgtt cttccaggcc ggaaagcgat cgcccgtgta gatcgccatc
     2641 ccggccgcgg cgaccgccgg catccagtag accagcgggc cttccatgcc gtccttctcg
     2701 aagcgcccct gccacggccc ttcgtacgag cgccccatgc tcacggcggg ccagccgtag
     2761 ttcttcccgc ccttgatgat gttgacctcg tcgccgccgt tcgggccgtt ctcgctgttc
     2821 cacagctcgc cggtgaccgg atggacgatg agcgccagcg agttgcggtg gccccacgtg
     2881 tagatctccg gtctgaacga cgcgtcgttg acgaacggat tgtctttggg cacggtgccg
     2941 tcgtcgcgca gacgcaggat cttgcccttg tggatgttct tctcctgccc ctgcgcgaag
     3001 ttggcgccgc cgccggagcc ggtggtcatg tagagcatgc cgtcgcggcc gaacacgatg
     3061 cgcgacgcgg agccgccggc gccgtcccac cacggctcgg ccacgaacag atccttcacg
     3121 tcggtaagcg ccatcccgtc gagacgcccg cgcgcgagca cggtggccag catgccgtcc
     3181 gcgcgcccct tgttgtaggt gaggtagacg aggcggttct ccgcgaaccg cggatggagc
     3241 accacgtcca tcagcccgga tagccgctgc gccttcaccg ccggcacgcc gctgatcggg
     3301 gtgggctcga gcacgccgtc cttgcgcagc aggcgcagac gtccgggccg ctccgtgatc
     3361 agcatgtcgc cgttcggcag ccacgcgagg ctccatggat tcgccaggcc gccggcgacg
     3421 atcgagacct tgatcttgtg ctgttcggcg gtgtcgagga cccacgggcc gtcgccaagc
     3481 gcggcacgcg gcacgccgat gggcgcccca cgctgcgtcc atacctcgga tgccgcggtg
     3541 agcatcagcg ccacgacgac gccggcttgg acggacgttg cgaccagggc gcgcatgcca
     3601 gtgctcctta tcggatggcg atcgggttac ccggcgagcc cgtcgcgccc ttgaggcgca
     3661 gcggcgcgaa cacgtacgcg aactcgtaga cattgtcgcg cgccaggact tcggtggcga
     3721 ggttctcgtg gaggtagatc ccgttcttcg ccagcagcag ctggtgcacg ggcgcggtca
     3781 ggttcggatc ggcgttcggg aacgcctcca caccccagtt gtccgagccg acgaccacca
     3841 cttccttgct cgccagccac tcacccgccg ccacggagat gccaggcgag ctggcgccga
     3901 acgtgttgtt gtc
//
LOCUS       DASSYW010000833         2060 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1706724, whole genome shotgun sequence.
ACCESSION   DASSYW010000833 DASSYW010000000
VERSION     DASSYW010000833.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2060)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2060)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2060
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1706724"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2052
                     /gene="lon"
                     /locus_tag="VFN38_13275"
     CDS             <1..2052
                     /gene="lon"
                     /locus_tag="VFN38_13275"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HET9012788.1"
                     /translation="QGLLENLNVEDRLRRVLVHVQRQIGMIEMQEEIKSQVQEELGER
                     QREMYLREQMKAIQKELGDDDQSKEISELREKLDKLDLSPAARAEVERELGRLERAGR
                     ESMEAQVIRTYLEWIAELPWNTRSDDNLDLARAQTVLDEDHYGLPDVKDRVHEFLAVR
                     QLRAQEMADEVESSGEVPVTAFKPDRSEATPVLNVTGEHRAVTDKKEAKARAMAKGPI
                     LLFSGPPGVGKTSIAKSIARSLGREYVRVALGGVRDEADIRGHRRTYVGAMPGRIIQG
                     LKQAKTRNPVFLLDEVDKLGASFQGDPASALLEVLDPAQNDTFTDHYLNIPFDLSEVL
                     FIATANFVQNIPGPLFDRMEAVEFAGYTEREKAEIAKKYLIPRQLEDSGLKSKNIVFD
                     DAAVMSIVSNYTRESGVRQLERQVGAVARKVARKLASGETDDFHISVQDVRDLLGRPR
                     VHPERANEENEIGVAAGMYYTPMGGDIMFVEAAIRRLQGAQRASDRDEEKVQVSGWGN
                     VSLILTGQLGDVMKESARAALTYAATHASALKIPEDRLGSIEVHVHVPAGAIPKDGPS
                     AGVAISTALVSAMSGRPVRRDVAMTGESTLRGRVLPIGGLKEKVLGAHRAGITTIILP
                     KDNEADMEDIPEEVRNQLTFHCVSTLDEAFAIALLPPVNGTPPAAKPQIMEEAEAAVG
                     A"
BASE COUNT          371 a          686 c          751 g          252 t
ORIGIN      
        1 caggggctgc tcgagaacct gaacgtcgag gatcgcctgc gccgcgtgct cgtccacgtg
       61 cagcggcaga tcggcatgat cgagatgcag gaggagatca agtcgcaggt gcaggaggag
      121 ctcggcgagc gccagcgcga gatgtacctg cgcgagcaga tgaaggcgat ccagaaggag
      181 ctcggcgacg acgaccagag caaggagatc agcgagctgc gcgagaagct cgacaagctc
      241 gacctctccc cggccgcccg cgccgaagtc gagcgcgagc tgggccgcct cgagcgcgcc
      301 ggccgggagt cgatggaggc ccaggtgatc cggacgtacc tcgagtggat cgccgagctg
      361 ccgtggaaca cgcgcagcga cgacaacctc gacctcgcgc gcgcgcagac cgtgctcgac
      421 gaggaccact acgggcttcc ggacgtgaag gaccgggtgc acgagttcct cgccgtgcgc
      481 cagctccgcg cccaggagat ggcggacgag gtggagtcct cgggcgaggt gccggtgacg
      541 gcgttcaagc ccgaccgcag cgaggcgacg ccggtgctga acgtgaccgg cgagcacagg
      601 gcggtgacgg acaagaagga ggcgaaggcg cgcgcgatgg ccaagggccc catcctgctc
      661 ttctccggtc cccccggcgt cggcaagacc tcgatcgcca agtccatcgc ccgctcgctc
      721 gggcgcgagt acgtgcgcgt cgccctcggc ggcgtgcgcg acgaggcgga catccgcggc
      781 caccggcgca cgtacgtcgg cgcgatgccc ggccgcatca tccaggggct caagcaggcc
      841 aagacgcgga acccggtgtt cctgctcgac gaggtggaca agctgggcgc gtcgttccag
      901 ggcgatcccg ccagcgccct gctcgaggtc ctggacccgg ctcagaacga caccttcacc
      961 gaccactacc tcaacatccc gttcgacctg agcgaggtgc tgttcatcgc caccgcgaac
     1021 ttcgtccaga acatccccgg cccgctgttc gatcgcatgg aggcggtgga gttcgccggc
     1081 tacaccgagc gcgagaaggc ggagatcgcg aagaagtacc tgatcccgcg ccagctcgag
     1141 gactcggggc tcaagagcaa gaacatcgtg ttcgacgacg cggccgtgat gagcatcgtg
     1201 agcaactaca cgcgcgagag cggcgtgcgg cagctcgagc gccaggtggg cgcggtggcg
     1261 cgcaaggtgg cgcgcaagct cgcgtccggc gagacggacg acttccacat cagcgtgcag
     1321 gacgtgcgcg acctgctcgg ccggccgcgg gtgcatccgg agcgcgcgaa cgaggagaac
     1381 gagatcgggg tggcggcggg gatgtactac accccgatgg gcggcgacat catgttcgtc
     1441 gaggcggcca tccgccggct tcagggggcg cagcgcgcct ccgaccggga cgaggagaag
     1501 gtccaggtca gcgggtgggg aaacgtgtcg ctcatcctca ccgggcagct cggggacgtg
     1561 atgaaggaga gcgcacgcgc cgccctcacc tacgccgcga cgcacgcgtc ggcgctcaag
     1621 atccccgagg accggctcgg ttccatcgag gtgcacgtgc acgtgccggc gggcgccatc
     1681 cccaaggacg gacccagcgc cggcgtcgcg atctccacgg cgctggtgag cgcgatgtcg
     1741 ggccggccgg tgcgacgcga cgtcgcgatg acgggcgagt ccacgctgcg gggccgcgtg
     1801 ctgcccatcg gcgggctgaa ggagaaggtc ctgggcgccc accgggcggg gatcaccacc
     1861 atcatcctgc cgaaggacaa cgaggcggac atggaggaca tcccggagga ggtgcgcaac
     1921 cagctcacct tccactgcgt gagcacgctc gacgaggcgt tcgcgatcgc cctgctcccg
     1981 ccggtgaacg gcactccccc cgcggcgaag ccgcagatca tggaggaggc cgaagcggcg
     2041 gtcggagcgt agaccggctg
//
LOCUS       DASSYW010000834         4041 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_580596, whole genome shotgun sequence.
ACCESSION   DASSYW010000834 DASSYW010000000
VERSION     DASSYW010000834.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4041)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4041)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4041
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_580596"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(87..695)
                     /locus_tag="VFN38_13280"
     CDS             complement(87..695)
                     /locus_tag="VFN38_13280"
                     /inference="COORDINATES: protein motif:HMM:NF015944.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LemA family protein"
                     /protein_id="HET9012789.1"
                     /translation="MTRRWLALLLPLALTGCGYNKIQTLDEQANAAQGQIEVQLQRRA
                     DLIPNLVETVKGFAKQELAVFGEVARARGGLLNAVQSKDPEQMAAANATMTGALGRLL
                     AVSEAYPQLKSDQGFLRLQDELAGTENRIAVSRTDYNGAVQQYNSLIRTFPTVLTAKL
                     TGAKEKKYYQVSDAANREAPKVDFGAPATPSVPPASTAPAKP"
     gene            complement(769..1488)
                     /locus_tag="VFN38_13285"
     CDS             complement(769..1488)
                     /locus_tag="VFN38_13285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012790.1"
                     /translation="MATMTLDDLVTQLRAAYGSHLTAVVLYGSAATAEHQGRKGDHDV
                     LVLLDQFEPAMVAAASAVARAWRDAGNPPPMTMTADEWRRSSDVFPMEYSDILERHRV
                     LHGSAPFGDTSVSPDHLRLQLEQQVLGKLLHLRQGALLAGTDGKRQLELIAASFSTMM
                     VLFRAVLRLHREKPAPNHVALAERVAALAGLDATPFVRAARHVRGEAKLSATDAGPVL
                     AGYLSGIERLNAYLDRYGSAP"
     gene            complement(1495..2316)
                     /locus_tag="VFN38_13290"
     CDS             complement(1495..2316)
                     /locus_tag="VFN38_13290"
                     /inference="COORDINATES: protein motif:HMM:NF016424.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TPM domain-containing protein"
                     /protein_id="HET9012791.1"
                     /translation="MISLFAGRVLLGALLLLQGGPQIPAPRGLVNDFAQALSPASVAR
                     MERVAQDVRDKSKGEIAVVTLADLGGRDVADVARRIGREWKVGNMADIGDRSRNAGVV
                     ILLVPKETSSDGRGYCRIETGQGVEGFITDATSGEICREATPAFRERDYGTGLELVTL
                     RVAQRFAQEYGFALDTTLAAPVIRQPARTTSRDSGGISPLFLLILLFVVLSLLGGGRR
                     RGCGGCMPIFLPMGGFGGGRGGGWSGGGGGFGGGGGFGGFGGGGGFSGGGGGSSW"
     gene            2472..3191
                     /locus_tag="VFN38_13295"
     CDS             2472..3191
                     /locus_tag="VFN38_13295"
                     /inference="COORDINATES: protein motif:HMM:NF024853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HET9012792.1"
                     /translation="MPRPLARFLGVLAFAAATVACARSDARSAAQTSASAGVVATPAP
                     SAGKPGALTDSVSTAADRGRIRGAESAPVGLVEVSDFQCPYCKKWHDESFALLDKEYV
                     QTGKVRLAYLNYPLTSIHRNAQAAAEAAMCASVQGKFWPLHQSLFETQLRWQAMDNPV
                     TTFDSLAVAAGANQAAWRQCMTSHATAALIDADRDRTSASGVRSTPTFFIGDRKLEGA
                     YPVDSFRVAIDAAIAKARGGK"
     gene            3223..>4041
                     /locus_tag="VFN38_13300"
     CDS             3223..>4041
                     /locus_tag="VFN38_13300"
                     /inference="COORDINATES: protein motif:HMM:NF016311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase N-terminal domain-containing
                     protein"
                     /protein_id="HET9012793.1"
                     /translation="MNRALALGYEGVARLARGLAALAPASEHKLVATFAARRGVLARY
                     AAFARDSSRPLLWMHAPSVGEGLQARPVLELMRERRPTTQLAYTYFSPSAQAFAAALA
                     VDFRDVLPFDDAPDMRAALAALAPTALVFSKVDVWPTLAREASRRGTRLGIVSATLAA
                     SSSRRGGIAVALLRDAYARIDRVGAISTDDADRLVALGVPSSRVTITGDTRYDQVWAR
                     AARVDRAGPLLAALSNGRPTLVAGSTWPADEAALLPAWTRVAARHPDARLVIAPH"
BASE COUNT          559 a         1550 c         1333 g          599 t
ORIGIN      
        1 ctgcttcact gcttcactgc ttcactgctt cactgcttca ctgcttcact gcttcactgc
       61 ttcaccgcct cactgctcca ctccgtttac ggcttggccg gcgccgtgct ggcgggcggg
      121 acgctcggcg tggcgggcgc gccaaagtcc accttcggcg cctcgcggtt cgcggcgtcg
      181 gacacctggt agtacttctt ctccttcgcg cccgtcagct tcgcagtgag caccgtggga
      241 aaggtacgga tgagcgagtt gtactgctgc acggcgccgt tgtagtcggt gcgcgagacg
      301 gcgatccggt tctcggtgcc cgccagctcg tcctggagcc gcaggaatcc ctgatcgctc
      361 ttgagctgcg gatatgcttc cgacaccgcg agcagccggc cgagcgcccc ggtcatcgtc
      421 gcgttcgcgg ccgccatctg ctcgggatcc ttgctctgca cggcgttcaa caggccgccc
      481 cgggcgcgcg cgacttcgcc gaacaccgcg agctcctgct tggcgaagcc cttgaccgtc
      541 tccaccaggt tggggatcag gtcggcccga cgctgcagct gcacctcgat ctgcccctgc
      601 gccgcgtttg cctgctcgtc gagcgtctgg atcttgttgt agccgcagcc ggtgagggcc
      661 agcggaagaa ggagggcgag ccagcgacga gtcatgggat ccgttcctga atgagcgtgg
      721 ggtgtggtat cgggaaagat gcgcgacgta cgtcgatgcg gcgaggcctc agggcgcgga
      781 gccgtagcgg tcgaggtacg cgttcagccg ctcgatgccg gacagatagc cggccagcac
      841 cggtccggcg tcggtcgccg acagcttcgc ttcgccgcgc acgtgtcggg cggcacgcac
      901 gaacggcgtg gcatcgagac cggcgagcgc cgcaacccgc tccgccagcg ccacgtggtt
      961 gggcgccggc ttctcgcggt gaaggcgcag cacggcccgg aacagcacca tcatggtgct
     1021 gaagctcgcg gcgatcagct cgagctgccg cttgccgtcg gtgcccgcca gcagtgcgcc
     1081 ctggcgcagg tgcagcagct tgccgagcac ctgctgctcc agctgcaggc gcagatggtc
     1141 cggcgacacg gaggtgtcgc cgaacggcgc ggagccgtgg agcacgcggt gccgctcgag
     1201 gatgtcactg tactccatcg ggaacacgtc cgaggaccgg cgccactcgt ccgcggtcat
     1261 cgtcatcggc ggcggattgc cggcgtcgcg ccacgcgcgt gccaccgccg acgccgccgc
     1321 gaccatggcc ggctcgaact ggtcgagcag caccagcacg tcgtggtcgc ccttcctccc
     1381 ctggtgctcc gccgtcgcgg ccgaaccgta cagcacgacc gcggttagat gtgagccgta
     1441 ggcggcgcgc agctgggtca cgagatcgtc gagtgtcata gtcgccatgg tcgcctacca
     1501 ggaagagccg ccgccaccac cactgaaccc gccgccgccg ccgaacccgc cgaatccacc
     1561 gccgcccccg aacccgccac cgccgccgct ccatcccccg ccacgcccac cgccgaagcc
     1621 gcccatcggc aggaagatcg gcatgcagcc cccacagccg cgccgccgtc cgccaccgag
     1681 cagcgagagc accacgaaca gcaggatgag caggaagagc ggactgatgc ccccgctgtc
     1741 tcgcgacgtc gtgcgggcgg gctgccggat caccggcgcc gcgagggtcg tgtcgagcgc
     1801 gaagccgtat tcctgcgcga accgctgtgc gacgcgcagc gtcacgagct ccaaccctgt
     1861 cccgtagtcg cgctcccgga aggccggcgt cgcttcgcgg cagatctcgc ccgaggtggc
     1921 atcggtgatg aacccctcga cgccctgccc cgtctcgatg cggcagtagc cgcgtccgtc
     1981 gctcgacgtc tccttgggca ccagcaggat gacgacgccg gcgttccgcg accggtcgcc
     2041 gatgtccgcc atgttgccga ccttccactc gcgcccgatg cgccgcgcca cgtccgccac
     2101 gtcgcgcccg ccgaggtcgg ccagggtgac gacggcgatc tcgcccttgg acttgtcgcg
     2161 cacgtcctgc gcgacccgtt ccatccgcgc cacggacgcc ggcgacagcg cctgggcgaa
     2221 gtcgttcacc agcccccgcg gcgcgggaat ctgcggaccg ccctggagca gcagcagggc
     2281 acccagcagc acccgtccgg caaagagtga gatcatctcg aggtatgaga gtcgacccgc
     2341 ggcccgccac cacctgccca acgatagcgc tcggcgcagg gcgacggcag gcgcttgggt
     2401 gacgctcgct cacccgggcc cggcggcatt agctttcggg cgagtcgtca ccatccttca
     2461 gccctcgacc catgccgcgt cctctcgccc gcttcctggg cgttctcgcc ttcgccgccg
     2521 cgaccgtcgc gtgcgcccgc tcagacgcca gatccgccgc gcagacgtcc gcctccgccg
     2581 gcgtggtcgc gaccccggcg ccgagcgccg gcaagccggg cgccctcacc gattccgtca
     2641 gcaccgccgc cgaccgcggc cgcatccgcg gcgccgagtc ggcgcccgtc gggctggtcg
     2701 aggtgagcga cttccagtgc ccctactgca agaagtggca cgacgagtcg ttcgcgctcc
     2761 tcgacaagga atacgtgcag acgggcaagg tgcgcctcgc gtacctcaac tatcccctca
     2821 cgagcatcca ccggaacgcg caggccgcgg ccgaggcggc catgtgtgcc tccgtgcagg
     2881 gaaagttctg gcccctccac caatcgctgt tcgagaccca gctccgctgg caggcgatgg
     2941 acaatccggt gacgaccttc gactcgctcg ccgtggccgc gggcgcgaac caggcagcgt
     3001 ggcgccagtg catgacgtcg cacgccaccg ccgcgctcat cgatgcggac cgcgaccgca
     3061 cgagcgcgtc cggcgtgcga tccacgccga cgttcttcat cggcgaccgc aagctcgagg
     3121 gcgcctaccc ggtggactcc ttccgcgtcg ccatcgacgc ggccatcgcg aaggcgcgcg
     3181 gcggcaaata gggacgtcgg ttcgcgccgc cggcaccacg cggtgaaccg ggcgctcgca
     3241 ctgggctatg aaggggtcgc gcgcctcgcg cgcggcctcg ccgcgctcgc gcccgcctcc
     3301 gagcacaagc tcgtggcgac gttcgcggca cgccgcggcg tgctcgcgcg ctacgccgcc
     3361 ttcgcgcgcg actcgtcgcg tccgctgctc tggatgcacg cgccgagcgt gggcgagggg
     3421 ctgcaggcgc ggcctgtcct cgagctgatg cgcgagcggc gccccaccac gcagctcgcg
     3481 tacacgtact tctcccccag cgcgcaggcc ttcgccgccg cgctggcggt cgacttccgc
     3541 gacgtgctcc cgttcgacga cgcgcccgac atgcgtgccg cgctcgctgc gctcgcgccg
     3601 accgccctcg tgttcagcaa ggtcgacgta tggcccacgc tcgcgcgcga agcgtcgcgc
     3661 cgcgggacgc gactcggcat cgtgagcgcc accctcgcgg cctcctcctc gcgccggggc
     3721 ggcatcgccg tggccctgct gcgcgacgcg tatgcccgca tcgatcgcgt cggtgccatc
     3781 agcaccgatg acgccgatcg cctggtggcc ctcggcgtcc cgtcgtcacg cgtcacgatc
     3841 accggtgaca cgcgctacga ccaggtctgg gcacgggcgg cgcgagtcga tcgcgcgggt
     3901 ccgctcctcg ccgcgctgtc gaacggtcgt cccaccctcg tcgccggttc cacctggcca
     3961 gccgacgagg ccgcgctgct ccccgcatgg acgcgcgtcg cggcgcgcca tcccgatgcg
     4021 cgcctcgtca tcgccccaca c
//
LOCUS       DASSYW010000835         2273 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1002395, whole genome shotgun sequence.
ACCESSION   DASSYW010000835 DASSYW010000000
VERSION     DASSYW010000835.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2273)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2273)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2273
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1002395"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..714
                     /locus_tag="VFN38_13305"
     CDS             <1..714
                     /locus_tag="VFN38_13305"
                     /inference="COORDINATES: protein motif:HMM:NF014826.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PHP domain-containing protein"
                     /protein_id="HET9012794.1"
                     /translation="HTNWSDGRDTTEQMVQAARRLGYEYFAITDHSERAWASRTLAVA
                     DVPKQRAEIEAVRSRVSGIEVLHGVEVDILHDGTLDFPDHVLEDFDIVLASLHDDGGH
                     DGARLTERYLSAMRHPLVNVITHPANRSPGARAGYDLDFDRLFDAAAETGTAMEVDGA
                     PGHLDMDGAVARRAVERGVTVVVDSDCHRSENLARQMEFGVGTARRGWLEPRHVLNTK
                     GIADVRKFVARKRRLAGLR"
     gene            834..1511
                     /locus_tag="VFN38_13310"
     CDS             834..1511
                     /locus_tag="VFN38_13310"
                     /inference="COORDINATES: protein motif:HMM:NF015510.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_process: GO:0042953 - lipoprotein transport [Evidence
                     IEA];
                     GO_process: GO:0044874 - lipoprotein localization to outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein carrier protein LolA"
                     /protein_id="HET9012795.1"
                     /translation="MRLGVAVLLLAGHTLAGHVWLQAQGGPAAAPNADALAKALQQRY
                     QTIKDFSADFVHTYRGGQLRTKTSERGTVKIKKPGMMRWIYTVPERKEFVSDGLKIYS
                     HIPADHQVLVSDVPPDGDVSTPTLFLSGKGDLARDFTASIVQSPVPDSIGLKLTPRRP
                     EAQYDYFVVATTQPGLQIRALATHDRQGGDSVIAFTNLKENQGISDKEFAFRIPKGAD
                     VITNRGN"
     gene            1528..>2273
                     /locus_tag="VFN38_13315"
     CDS             1528..>2273
                     /locus_tag="VFN38_13315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012796.1"
                     /translation="MAALTLALLAAGCVTTGMRAGQKAEQAQDYDAAVIEYTKILKEH
                     PDNREARLSLDRAKLRAALDHHNRGQRLRNGGRLDEALVELQIASELNPANGDTEAAL
                     ADVRSQLRNKVAVTREGKTQLETLIERSRDLPPLGIDLPADARMPAAIAFGPNASARD
                     VFTALGRFANVNVVFDPTYRDQTVTIDLRNSTFEAALQAVAASTRNFYRVTGQRTITV
                     VPDTPAKRREYEEEVVRTFFLSNADLKETM"
BASE COUNT          412 a          799 c          751 g          311 t
ORIGIN      
        1 cacaccaact ggagcgacgg gcgcgacacc accgagcaga tggtgcaggc ggcgcgcagg
       61 ctcggctacg aatacttcgc gatcaccgat cactcggaac gcgcgtgggc gtcgcgcacg
      121 ctcgccgtgg ccgacgtgcc gaagcagcgc gctgaaatcg aggccgtgcg ttcgcgcgtc
      181 agcggcatcg aggtgctgca cggcgtggaa gtggacatcc tgcacgacgg cacgctcgac
      241 ttccccgatc acgtactcga ggatttcgac atcgtgctcg cgtcgctgca cgacgacggg
      301 ggacacgacg gcgcgcgact gaccgagcgg tatctgagcg cgatgcgcca cccgctggtg
      361 aacgtcatca cgcacccggc caaccgctct cccggagccc gggccggtta cgacctggac
      421 ttcgaccggc tgttcgacgc ggccgccgaa accggtaccg ccatggaagt ggacggcgcc
      481 cccggccacc tcgacatgga cggagcggta gcccggcggg cggtcgagcg cggcgtgacc
      541 gtggtggtgg acagcgactg tcaccgctcc gagaacctgg cccgccaaat ggagttcggc
      601 gtcgggacgg cccgccgcgg ctggctggag ccgcgccacg tcctgaacac gaaggggatc
      661 gcggacgttc ggaagttcgt ggcccgcaag cgcaggctcg cagggctgcg ctagaaaccc
      721 tcgctctgcc ccgctagcgg ccagtatttg atggcccgcc ctccgggcgg gcggttgagt
      781 cggcgtctgg gcatgcccgt gcagtggcag gcaaaatgct aaggttggtc catatgcgcc
      841 ttggcgtcgc cgtactgctg cttgccggcc acactctcgc gggacacgtg tggctccagg
      901 cacagggggg cccggccgcg gccccgaatg ccgacgcgct ggccaaggcg ctgcagcagc
      961 gctaccagac gatcaaggac ttctccgccg acttcgtcca cacctaccgg ggcggccagc
     1021 tccgcacgaa gacgagcgag cgcggcacgg tgaagatcaa gaagccgggc atgatgcgct
     1081 ggatctacac ggtgcccgag cgcaaggaat tcgtgtcgga cggcctgaag atctactcgc
     1141 acatcccggc ggaccaccag gtgctcgtgt cggacgtgcc cccggacggc gacgtcagca
     1201 cccccacgct gttcctgtcc ggcaaaggcg acctcgcgcg cgacttcacg gcgtcgatcg
     1261 tccagagccc ggtgcccgac tcgatcggcc tcaagctcac ccccaggcgg cccgaggccc
     1321 agtacgacta cttcgtcgtg gccaccacgc agccgggtct ccagatccgc gccctggcca
     1381 cccacgaccg ccaggggggc gattccgtca tagccttcac gaacctaaag gaaaatcagg
     1441 gcatatccga taaggagttt gcgttccgca tacccaaagg cgctgatgtc atcaccaacc
     1501 gcggtaactg acagattcgc caaggctttg gcggctctca cgctggccct gctggcggcg
     1561 gggtgcgtca ccaccggcat gcgcgccggg cagaaggccg aacaggcgca agactacgac
     1621 gccgccgtca tcgaatacac caagattctc aaggagcacc cggacaaccg ggaagcccgc
     1681 ctgtcgctgg accgggccaa actccgggcg gcgctggatc atcacaaccg cgggcagcgg
     1741 ctccgcaacg gcgggcgcct cgacgaggcg ctggtcgaac tgcagatcgc ctccgagctc
     1801 aacccggcta acggcgacac cgaggcggcg ctcgccgacg tgcgctcgca actccggaac
     1861 aaggtggcgg tgacgcgcga ggggaagacg cagctcgaga cgctcatcga gcggtcgcgg
     1921 gacctgccgc cgctcggcat cgacctcccg gcggacgccc ggatgcccgc ggcgatcgcg
     1981 ttcggtccca acgccagcgc ccgcgacgtg ttcaccgcgc tcggccgctt cgccaacgtc
     2041 aacgtggtgt tcgacccgac ttaccgcgat cagacggtca cgatcgatct ccggaacagc
     2101 accttcgagg cggcgctgca ggccgtggcg gccagcacgc gcaacttcta ccgcgtcacc
     2161 gggcagcgca ccatcaccgt ggtgcccgac acgccggcca agcggcgcga gtacgaagag
     2221 gaagtcgtgc gcacgttctt cctcagcaac gcggacctga aggaaacgat gga
//
LOCUS       DASSYW010000836         2452 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_693252, whole genome shotgun sequence.
ACCESSION   DASSYW010000836 DASSYW010000000
VERSION     DASSYW010000836.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2452)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2452)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2452
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_693252"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..597
                     /locus_tag="VFN38_13320"
     CDS             <1..597
                     /locus_tag="VFN38_13320"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HET9012797.1"
                     /translation="VGVPQLVRITSRDPAPPPAEYIRVSGGLFLDMSIHDLDMARFLV
                     QEPVVEVFATGSAFDPAIAALGDIDTAVIMLRFANGALCSIDNSRRAVYGYDQRLEVF
                     GSRGCLVVPNRTPTQVEHWDGAGQHRDRPQHFFLDRYQGSYVAEMQEFVERVRHGRDT
                     AVSGHDGLQALVLALAARTSLQEGRTVHLDPASGLDAA"
     gene            611..1537
                     /locus_tag="VFN38_13325"
     CDS             611..1537
                     /locus_tag="VFN38_13325"
                     /inference="COORDINATES: protein motif:HMM:NF016826.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-deoxy-glucuronate isomerase"
                     /protein_id="HET9012798.1"
                     /translation="MPPAAEHTSPTPAPLITAHRDGFPVGYTAITREEDPLLGQSIDF
                     GIHVLHADETFDDNRAQECAWILLHGKALVTVAGHDAEVERSSLFDEAPTVVHLGPRT
                     PVRVRSQSERVEWAVARVTNARSFPPRVFWPHEVEPEYRGLGLAQGTCVRNVRQVFDR
                     TVRPESNLVIGEVINYPGRWSSYPPHHHEQPEIYHYRFNPPQGYGHGEVGERVFKVRQ
                     FDTLRIAAAHDHAQVAAPGYAMYYLWIVRHLDDNPYAGFEYTADHTWMLDPEAAVWEP
                     ADGPLATRGRAGGERHGSGRWSAERERQGGGR"
     gene            1534..>2452
                     /locus_tag="VFN38_13330"
     CDS             1534..>2452
                     /locus_tag="VFN38_13330"
                     /inference="COORDINATES: protein motif:HMM:NF014795.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HET9012799.1"
                     /translation="MKRATAAPVRDGRNTHHETVRLTMAAALVHFLKAQYVERDGVEH
                     RLVQGVAGIFGHGNVAGLGQALEECGGTELPYFQPKNEQGMVHMAVAFAKAKRRLGTL
                     ACTSSVGPGATNMVTGAAAATVNRLPVLLLPGDVFANRLPAPVLQQLEHPHSMDVSVN
                     DCFRPVSRYWDRIQRPEQILAALPEAMRVLASPVETGAVTLCLPEDVQTEAYDYPAHF
                     FAKKVYRVPRPRCSSEDIGAAAALLREAQRPLLVAGGGVHYADATAALSAFVERTRIP
                     VGMTQAGKGAFPDAHPSCLGGIGATGTQAA"
BASE COUNT          403 a          838 c          837 g          374 t
ORIGIN      
        1 gtcggcgtgc cgcagctcgt ccgcatcacg agtcgcgatc cggcgccgcc gccggccgaa
       61 tacatccgcg tttccggcgg cctgttcctg gacatgagca ttcacgacct ggacatggcg
      121 cgtttcctgg tgcaggagcc ggtcgtggaa gtcttcgcca ccggcagcgc cttcgacccg
      181 gcgatcgctg cgctcggcga catcgacacc gcggtcatca tgctgcgctt cgcgaatggt
      241 gcactctgca gcatcgacaa ttctcgtcgc gccgtctatg gctacgacca gcgtctcgag
      301 gtcttcggct cacgtgggtg tctcgtcgtt cccaaccgca caccgacaca agtcgaacac
      361 tgggacgggg ccggtcaaca ccgcgaccgc ccgcagcatt tcttcctcga ccggtatcaa
      421 ggctcctacg tggccgaaat gcaggaattc gtcgagcgcg tgcggcatgg acgcgatacc
      481 gcggtctcgg ggcacgatgg gctgcaagcc ttggtgctgg cgctggcggc acgcacgtcg
      541 ctgcaggagg gccgcacggt gcacctcgat cccgccagcg gactcgatgc cgcctgaggg
      601 aggagccgcg atgccgccag cggcggaaca cacctccccg acgcccgcac cgttgatcac
      661 ggcgcaccgt gacggcttcc cggtcgggta cacggcgatc acccgtgaag aggacccgct
      721 gctcggacag agcatcgact tcggcatcca cgtgctgcat gccgacgaga cattcgacga
      781 caatcgtgcg caggagtgcg cctggatcct gctgcacggg aaggcgctgg taaccgtcgc
      841 gggccacgat gcagaggtcg agcggtcgtc gctcttcgac gaagcgccga cggtggtgca
      901 cctgggtccg cggacgccgg tacgcgtgcg gagtcagagt gaacgcgtcg agtgggcggt
      961 ggcccgggtc acgaacgcgc gctcgttccc gccgcgtgtc ttctggccgc acgaggtcga
     1021 acccgagtac cgcggtctcg gtctcgcgca gggaacgtgt gtgcgcaacg tgcgccaggt
     1081 cttcgatcgc acggtgcggc ccgagtccaa tctcgtcatc ggcgaggtca tcaactatcc
     1141 ggggcgctgg tccagctacc cgccacatca ccacgaacag cccgagatct accattaccg
     1201 gttcaacccg ccgcagggct acggccacgg cgaggtgggc gagcgcgtct tcaaggtgcg
     1261 gcagttcgat acgctgcgca tcgccgcggc acacgatcat gcgcaggtcg ccgccccggg
     1321 ctacgccatg tactacctgt ggatcgtgcg gcacctcgac gacaatccct acgctggctt
     1381 cgagtacacc gccgaccaca cctggatgct cgaccccgaa gccgcggtgt gggaacccgc
     1441 cgacgggccg ctcgcgacac gcggtcgcgc cggcggggag cgccacggaa gcggccgatg
     1501 gagcgcggaa cgggagcgcc aaggaggcgg ccgatgaaac gcgcgacggc agcgccggtc
     1561 cgcgacggga ggaacaccca ccacgagacg gtgcgtctca cgatggcggc agcgctcgtg
     1621 cacttcctca aggcgcagta tgtcgagcgc gacggcgtgg agcatcgtct cgttcaggga
     1681 gtcgccggca tcttcggaca cggcaacgtc gcgggtctcg gccaggcctt ggaagagtgc
     1741 ggcgggaccg agctaccgta cttccagccg aagaacgagc agggcatggt gcacatggcg
     1801 gtcgcctttg cgaaggcgaa acggcgactc ggcacgctgg cctgcacgag ctccgtcggt
     1861 cccggggcga cgaacatggt gaccggtgcc gcggcggcga cggtgaaccg gctgccggtg
     1921 ctgctcttgc caggagacgt gttcgccaac cgcctgccgg ctccagtcct gcagcagctc
     1981 gaacacccgc acagcatgga cgtgagcgtc aacgactgct tcaggccggt gtcccgctac
     2041 tgggatcgca tccagcgccc ggaacagatt ctcgccgcgt tgccggaggc gatgcgggtg
     2101 ctggcctcgc cggtcgagac gggcgccgtg accctgtgtt tgcccgaaga tgtgcagacg
     2161 gaggcctacg actacccggc acacttcttc gccaagaagg tgtatcgggt accgcggccg
     2221 cggtgcagca gcgaagacat cggcgccgcg gccgcgctcc tgcgcgaagc gcagcgaccg
     2281 ttgctcgttg ccggcggcgg tgtgcactac gcggacgcca cggcggcgtt gtcggcgttc
     2341 gtcgagcgca ctcggattcc cgtcggcatg acccaggccg gcaaaggcgc ctttcccgac
     2401 gcgcaccctt cctgcctcgg gggcatcggc gccacaggga cgcaggcggc cg
//
LOCUS       DASSYW010000837         3936 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1591997, whole genome shotgun sequence.
ACCESSION   DASSYW010000837 DASSYW010000000
VERSION     DASSYW010000837.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3936)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3936)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3936
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1591997"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(218..1525)
                     /locus_tag="VFN38_13335"
     CDS             complement(218..1525)
                     /locus_tag="VFN38_13335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HET9012800.1"
                     /translation="MKYRYTKYTGDLMDEIDLEDLVSKLSDLLLSSGFSNPWDPSDTD
                     EDRTMQALHDAILDALFSGGVLSDEAMQQLLGEPSDGDQEGVRQQLEDLIQQIIDRMM
                     ERGFITGAPDLETERERRAGAGGSVGEDTSRVQFEVTDKALDFLGYRALRDLLGSVGR
                     SSSGLHDTRHLSTGVEAIAAPKPYEFGDTLNIDPSSTILNAVQRIHLSGAGAASTALG
                     NSAGGGGIEIDYADLMVAQSDYQSSCATVIMLDCSHSMILYGEDRFTPAKRVALALSH
                     LIRTQYPGDSLHAVLFHDSAEEIPLKQLGRVRVGPYYTNTREGLRLARRILERQRKDM
                     RQIVMITDGKPSALTRPDGQIYKNAFGLDPHIVSETFAEVNACSKAGIMINTFMLARD
                     PDLVAFVRRVAAVCRGKAYFTTPYTLGQYVLMDYMNRKTKTIH"
     gene            complement(1568..3082)
                     /locus_tag="VFN38_13340"
     CDS             complement(1568..3082)
                     /locus_tag="VFN38_13340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium chelatase"
                     /protein_id="HET9012801.1"
                     /translation="MPNPSAISTLGDLRRAVERGEIRHRSVHEEVRDNLIEKLRAGGA
                     LFPGIVGYDETVLPQLVNALLSRHHFILLGLRGQAKTRLLRALVTLLDELIPVMPGCE
                     INDDPLQPICSSCRAQVAEAGDKTPVGWLERDARYVEKLATPDVTIADMIGDIDPIKA
                     ARAGLQLSNELTMHYGLLPRANRSIFAINELPDLAGKIQVGLFNILQEGDVQIKGYPV
                     RLPLDVLMAFTANPEDYTARGKIITPLKDRIGSEIRTHYPVSRGDAQTITAQEAWITR
                     QGAGPRAEVPSFVAEVVEEIAFQARQDRRVDKRSGVSQRLPISVMENVISNAERRAIV
                     SGEAMAVPRVTDVYSALPSMTGKFELEYEGELKGAEAIARELVRNAVANVAEGYLTHL
                     DPRRVIEWFDLGGSLQLGDTMSADDVLTHARAVQGLVDLAQEAGVPKGASAPMLAAGV
                     DFVLEGLYATKKISRSDERGYHASDTPVRRPSREAPSLEDEPRIPAGGKKKYYN"
     gene            3145..>3936
                     /locus_tag="VFN38_13345"
     CDS             3145..>3936
                     /locus_tag="VFN38_13345"
                     /inference="COORDINATES: protein motif:HMM:NF015000.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HET9012802.1"
                     /translation="MPFFQRGRPRVFAHRGGSALAPENTLAAFEQGLRAGADGLELDV
                     RLSADGVPVVVHDPTLDRTTNATGPVAARTAAELARVDAGWRFAGPHGDFPFRGQGLG
                     IPALREVLLRHRDVPIIIEMKIDSEAMATRVAGDIVAAGAEGNVCAAGYGGTSAAAIR
                     RALPQVAASATHAEVRLAVYRSWGGWPVRRPPFGGYQVPEYAGRIRIVSPRFIRHAHA
                     AGLEVQVWTIDAEDDMERLLGWGADALISNRPDLAVTMRDAFAGAL"
BASE COUNT          574 a         1338 c         1358 g          666 t
ORIGIN      
        1 ccgccagcgc gtcggccagc atggcccggt accgcggctc gaagacgtgc agcggcagga
       61 agacgtttgg aaacagcacg acgttgggca gcgggaagat cgggatcgtc ggcggcagca
      121 tcgaacgacg ggacggctag cgccccgccg gaggcggggc aattaaatac tggctgagcg
      181 aggcagagcc ggataaatgc atgtggcgga gcctcgttca gtggatcgtt ttggtcttgc
      241 ggttcatgta gtccatcagg acgtactggc ccagcgtgta cggcgtcgtg aaatacgcct
      301 tgccgcggca caccgccgcc acgcggcgca cgaacgccac caggtcgggg tcgcgcgcca
      361 gcatgaacgt gttgatcatg atgcccgcct tgctgcaggc gttcacctcg gcaaacgtct
      421 ccgacacgat gtgcgggtcg aggccgaagg cgttcttgta gatctgcccg tcggggcgcg
      481 tcagcgccga cggcttgccg tcggtgatca tgacgatctg acgcatgtcc ttgcgctgcc
      541 gctcgaggat gcgccgcgcc aggcgcagcc cttcgcgtgt gttggtgtag taggggccaa
      601 cccgcacgcg cccgagctgc ttgagcggta tctcctcggc cgaatcgtgg aagagcaccg
      661 cgtgcagcga gtcgccggga tactgcgtgc gaatgaggtg cgacagcgcc agcgccaccc
      721 gtttcgccgg ggtaaagcgg tcctcgccgt acaggatcat gctgtggctg cagtcgagca
      781 tgatgacggt ggcgcacgag ctctgatagt cgctctgtgc caccatcaga tcggcgtagt
      841 cgatctcgat cccgccgccg ccagcactat ttcctagagc ggtggacgcc gcgccggcgc
      901 cggagaggtg gatccgctgc accgcattca ggatcgtgct gctcgggtcg atgttcagcg
      961 tgtcaccgaa ctcgtacggc ttcggcgcgg caatcgcctc gacgccggtg ctcaagtgcc
     1021 gggtgtcgtg caggcccgag ctgctgcggc ccaccgagcc gagcagatcc cgcagcgcgc
     1081 ggtagcccag gaaatcgagc gccttgtcgg tgacttcgaa ctgcacgcgg ctggtgtcct
     1141 cgcccacgct gccgcccgcg ccggcgcgcc gctcgcgctc ggtttcgagg tccggggcgc
     1201 cggtgatgaa gccgcgctcc atcatacggt cgatgatctg ctggatcaga tcctcgagct
     1261 gctgccgcac gccttcctga tcgccgtcgg acggctcgcc gagcagctgc tgcatcgcct
     1321 cgtctgacag caccccgccg ctgaagagcg cgtcgaggat ggcgtcgtgc agcgcctgca
     1381 tcgtgcggtc ctcgtccgtg tccgacgggt cccacgggtt gctgaagccg ctcgacagca
     1441 gcaggtccga cagcttcgag acgagatcct cgagatcgat ctcgtccatc aggtcgccgg
     1501 tgtatttggt gtaccgatac ttcaagcgtt tttacctacc tgccccacct gacctggccc
     1561 acctgaccta gttgtaatac ttcttttttc caccggctgg gatccgcggc tcatcctcga
     1621 gcgacggcgc ctcgcgtgac ggacgccgca ccggcgtgtc gctcgcgtgg tagccgcgct
     1681 cgtcgctgcg gctgatcttc ttggtcgcgt agagtccctc gagcacgaag tccacgccgg
     1741 cggcgagcat cggcgccgaa gcgcccttgg ggacgccggc ctcctgcgcc aggtccacca
     1801 gcccttgcac cgcgcgcgcg tgcgtcagca cgtcgtcggc gctcatcgtg tcgcccagct
     1861 gcaggctgcc gccgagatcg aaccactcga tgacgcgccg agggtcgagg tgcgtcaggt
     1921 agccctcggc cacgttggcg acggcgttgc gcaccagctc gcgggcgatc gcctcggcac
     1981 ccttgagctc accctcgtac tccagctcga acttgccggt catcgacggc agcgcggaat
     2041 agacgtcggt gacgcgcggc accgccatcg cctcgcccga cacgatggcg cggcgctcgg
     2101 cgttcgagat gacgttctcc atcaccgaga tcggcaggcg ctggctgaca cccgaccgct
     2161 tgtccacgcg gcggtcctgc cgcgcctgaa acgcgatctc ctcgaccacc tcggcgacga
     2221 acgacggtac ttcggcgcgc ggaccggcgc cctggcgcgt gatccacgcc tcctgcgccg
     2281 tgatcgtctg cgcgtcgccg cggctcaccg gatagtgcgt gcggatttcg gagccgatgc
     2341 ggtctttgag cggcgtgatg atcttcccgc gcgccgtgta gtcctcgggg ttggcggtga
     2401 acgccatcag gacgtcgagc ggcagccgca ccgggtagcc tttgatctgg acgtcgcctt
     2461 cctgaaggat gttgaacagg cccacctgga tcttgcccgc caggtccggc agctcgttga
     2521 tggcgaagat gctgcggttg gcgcggggca gcaggccgta gtgcatcgtc agctcgttcg
     2581 agagctgcag cccggctcgc gccgccttga tcggatcgat gtcgccaatc atgtcggcga
     2641 tcgtcacgtc cggcgtcgcc agcttctcca cgtagcgcgc gtcgcgctcg agccagccca
     2701 ccggcgtctt gtcgcccgcc tcggccacct gggcccggca cgagctgcag atcggctgca
     2761 gcgggtcgtc gttgatctcg cagccgggca tcaccgggat cagctcgtcg agaagcgtga
     2821 cgagcgcgcg cagcaggcgc gtcttggcct ggccgcgcag gccgagcagg atgaagtgat
     2881 ggcgcgacag cagtgcgttg acgagctgag gcagcaccgt ctcgtcgtag ccgacgatgc
     2941 cggggaagag cgcgccgccg gcgcgcagct tctcgatcag gttgtcacgc acctcttcgt
     3001 ggacgctgcg atggcggatt tcgccgcgtt cgacggcgcg gcgcaggtcg cccagcgtgg
     3061 agatggccga gggattgggc atacggcgat cctatagcag ccgcccgaag ggcgggccat
     3121 taaacactgc tagcatgacc gccgatgcct tttttccagc gcggccgtcc gcgcgttttc
     3181 gcgcatcgcg gcggcagcgc gctcgcgccc gagaacacgc tggccgcctt cgagcagggg
     3241 ctgcgcgcgg gggcggacgg actcgagctc gacgtgcgcc tgtcggccga cggcgtgccc
     3301 gtcgtggtgc acgatcccac gctcgatcgc acgaccaacg cgacaggtcc cgtggcggcc
     3361 cgcacggcgg ccgagcttgc gcgcgtcgat gccggctggc gatttgccgg cccgcacggc
     3421 gacttcccgt tccgcggtca ggggctcggc attccggcgc tgcgcgaggt gctgctccgg
     3481 catcgcgacg tgccgatcat catcgagatg aagatcgact ccgaggcgat ggcgacgcgc
     3541 gtggccggcg atatcgtcgc cgccggtgcg gaagggaacg tgtgcgcggc gggctacggc
     3601 gggacgagcg cggcggccat ccgtcgcgcg ctgccgcagg tggccgccag cgccacgcac
     3661 gccgaggtcc gcctggcggt ctaccgctcg tggggcggct ggccggtgag gcggccgccg
     3721 ttcggcggct accaggtgcc cgagtacgcg ggccgcatcc gcatcgtgtc gccccgcttc
     3781 atccgccacg cccacgccgc cggcctcgag gtgcaggtgt ggaccatcga cgccgaggac
     3841 gacatggagc gcctgctcgg atggggcgcc gacgcgttaa tcagcaacag gcccgatctg
     3901 gccgtgacca tgcgggacgc ctttgcgggc gcgctc
//
LOCUS       DASSYW010000838         2681 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1446563, whole genome shotgun sequence.
ACCESSION   DASSYW010000838 DASSYW010000000
VERSION     DASSYW010000838.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2681)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2681)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2681
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1446563"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(205..696)
                     /locus_tag="VFN38_13350"
     CDS             complement(205..696)
                     /locus_tag="VFN38_13350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012803.1"
                     /translation="MASHHDSAERTRRRRAKSEYFMKPGKQGEVSVFRRPAGNRIEPK
                     LCGTMPSKTLALALVRQLEQAESVVNDIFLEATDDGIEALEAILRACRESVERRAARH
                     QHTPREPRHKRGVPATPRAAAPQSPESGAPAESAANEGPAKGNGPRRRRPRSNRRGRP
                     DRD"
     gene            1085..1291
                     /locus_tag="VFN38_13355"
     CDS             1085..1291
                     /locus_tag="VFN38_13355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012804.1"
                     /translation="MKRKSPEATYRAEKEKRVRPASHEQLMAEAKQAFEQFLADGKAA
                     RKGGRPKRTPAKPAVPADEIEDEL"
     gene            1430..2104
                     /locus_tag="VFN38_13360"
     CDS             1430..2104
                     /locus_tag="VFN38_13360"
                     /inference="COORDINATES: protein motif:HMM:NF025887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HET9012805.1"
                     /translation="MHFPRFHGPHASRRATASRWLLTALVAGSPALLAAPLSAQAGPA
                     PQGTARPVSAPSTAGKGAGKASGKGASKAAGKRARAPRLSARERIAADIGVAEQQIRR
                     AMVVQDTSTLAELWGDEYTFTSLSGETYSKAERLESVMSPAFMVDEAAEVLPSELDIV
                     RVYGNVAVVQSRLAPPGTAQSGSRGGRAKLLSVWVRGSDGKWRTVAAQATAVDMPLPA
                     PAKKKR"
     gene            2136..2573
                     /locus_tag="VFN38_13365"
     CDS             2136..2573
                     /locus_tag="VFN38_13365"
                     /EC_number="2.1.1.100"
                     /EC_number="2.1.1.334"
                     /inference="COORDINATES: protein motif:HMM:NF016107.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
                     /protein_id="HET9012806.1"
                     /translation="MNARAASIVATAGLVVVVLALFRAQSLVAPSPAGLVVQGAAILL
                     MLWARITFGRRSFHFAANPTAGELVTWGPYRWLRHPIYAAVLLFVWTAVLTHLSPLVV
                     ALGVAATAATAVRMRGEERLLAEHYPEYGAYAARTKRIVPGVF"
BASE COUNT          354 a          876 c         1059 g          392 t
ORIGIN      
        1 gtgtccacgg ggccggtggg aagcgccgag caggtgctgc tcacgttccg gatccccggc
       61 acgccggtgt tcgcgtcggt ggactcggtg gggcggctgc gcgaggtcgt gcccggctat
      121 ccggggcccg agggtctggc gccgctcttc cgggtgatgg tgcgggagga gtaggggcgt
      181 cctcgtcccg ccgcgccgcc cgttctaatc ccggtcgggg cggccgcgcc ggttggagcg
      241 ggggcggcgc cggcgaggcc cgttcccctt cgcgggaccc tcgttggccg ccgattccgc
      301 gggggcgccg gactcggggg actggggagc ggcggcgcgg ggggtcgcgg ggacgccgcg
      361 cttgtggcgg ggctcgcgag gcgtatgctg gtggcgagcg gcgcggcgct cgaccgactc
      421 gcggcaggcg cgcaggatcg cctcgagcgc ctcgatgccg tcgtcggtcg cctcgagaaa
      481 gatgtcgttg accaccgact ccgcctgctc gagctggcgc acgagggcga gggcgagcgt
      541 cttcgagggc atcgttccgc agagcttggg ctcgatgcgg ttgccggcgg ggcggcggaa
      601 gaccgacacc tcaccctgct tgcccggctt catgaagtac tccgacttcg cgcgtcgccg
      661 ccgtgtccgc tccgcgctgt cgtggtgtga agccatggct cgtcgtcgaa cggtggagag
      721 gccgatacgt cagaggaact taaatcggga tcgacgcgct gccgcaagcg gcgggcgact
      781 cccccgagag tcgcgcgaga gattgcccgc ccgcggccgc tttcccctac cccttctgga
      841 cgctctagag ggaggggagg gcacaggggc gccggggccg gcgcttgaca aactgaagag
      901 gccggtcgtc tggactccgt gaggcacaga ccgcatcttg tgcgggctgt cggggtatcc
      961 aggaacgagc ctgggcgccg gcgtctggcg tgcggggagg ccggcggcgg gagccgcggg
     1021 cgaagcacgc tccttgcgcg gcatgccgcc gagcgttcga cgacgatcat gcgacggagg
     1081 agagatgaag cggaagtcac ccgaggcgac atacagggcc gagaaggaga agcgcgtccg
     1141 accggcgtcg cacgagcagt tgatggccga ggcgaagcag gcgttcgagc agttcctcgc
     1201 cgacggcaag gcggcgcgga agggggggcg gccgaagcgc acgccggcca agcccgccgt
     1261 cccggcggac gagatcgagg acgagctgta ggacgagctg ccggagcagc cgcaggacga
     1321 gcgtcggttc cagttccaga caacgaaatc ccatccggtg cgcgacgcga ggtccgaaac
     1381 gcgcgtcgcg caccggatcg ttgcaggccg tttcccggag agtcgtcagg tgcacttccc
     1441 tcgttttcac ggtccccacg cgtcccgtcg cgcgacggcg tcgcgctggc tgctgaccgc
     1501 cctcgtcgcc ggatcgccgg cgctgttggc cgcgccgctg tcggcgcagg cgggtcccgc
     1561 gccgcagggg accgcccggc cggtctccgc gccatcgacc gcgggcaagg gggcgggaaa
     1621 ggcatcgggc aagggggcga gcaaggcggc ggggaagcgc gcgcgggcgc cgcgtctcag
     1681 cgcccgggag cggatcgccg ccgacatcgg ggtggcggag cagcagatcc ggcgggcgat
     1741 ggtggtccag gacacctcga cgctcgccga gctctggggg gatgagtaca cgttcacctc
     1801 gctctccggg gagacgtaca gcaaggcgga gcgtctcgag tcggtgatga gcccggcctt
     1861 catggtggat gaagccgccg aggtgctgcc gagcgagctg gacatcgttc gggtctacgg
     1921 caacgtcgcc gtcgtgcagt cgaggctggc tccgccaggc acggcgcaga gcggctcgcg
     1981 cggggggcgc gccaagctgc tgagcgtgtg ggttcgcggc agcgacggga agtggcggac
     2041 ggtggccgcg caggcgacgg cggtggacat gccgcttccg gctccggcga agaagaagcg
     2101 gtgaggcgcg ctcgccgcgc cggcatgacc cggtcgtgaa cgcccgcgcg gcgtccatcg
     2161 tggcgacggc ggggctcgtc gtcgtcgtcc tcgcgctctt ccgagcccag tccctggtcg
     2221 cgccctcgcc ggccggactc gtcgtccagg gcgcagcgat cctcctcatg ctgtgggcgc
     2281 gcatcacctt cggccggcgc agctttcact tcgcggccaa cccgaccgcc ggggagctgg
     2341 tgacgtgggg gccgtatcgc tggctgcgcc atccgatcta tgccgccgtg ctgctcttcg
     2401 tctggacggc ggtgctgacc catctctcgc cgctcgtcgt cgcgctcggc gtcgccgcca
     2461 ccgcggcgac cgcggtgcga atgcggggag aggagcggct gctcgccgag cattacccgg
     2521 agtatggggc gtacgcggcg cgaacgaagc ggatcgtgcc cggggtgttc taggggccgg
     2581 tcggcggcgg gtggttggcg gtgggcgtga tcgggagcga tcttttcgcg tcgctggcga
     2641 gttcgtgcga attcaccatc ccaatccctt cctcgatgcc g
//
LOCUS       DASSYW010000839         3634 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1407925, whole genome shotgun sequence.
ACCESSION   DASSYW010000839 DASSYW010000000
VERSION     DASSYW010000839.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3634)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3634)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3634
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1407925"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1356
                     /gene="rseP"
                     /locus_tag="VFN38_13370"
     CDS             <1..1356
                     /gene="rseP"
                     /locus_tag="VFN38_13370"
                     /inference="COORDINATES: protein motif:HMM:NF014244.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HET9012807.1"
                     /translation="AKLTGVYAPRFSIGFGPALWRHRRGETEYVLAALPLGGYVRMAS
                     RHDAETSFIEGGGEGESDALKPGQKGYDPDAMLPFGPRPVPENRWFESKSLAARLFIM
                     IAGVTMNILLAIVVLTGLALAYGEPVIGTRVVGAVHPLATAPALAQLQAGDTIVAVNG
                     AAVRNWNEIAERIDGAAPGPVVLRTNRGEVPVPVGTPGAPTSRELIGAVDFFMAPVIG
                     DVMPGSPARRAGLRAGDSIVTIGNLPVRSWAQLQERVTPAAGTDLPFQVRRGGRLLSL
                     SVRPESTSQKDPATGVMRPVGKIGAAAADPTTREPIGVGDAVVAGVRGTWVTAGKIVG
                     TVRGLITREVSVRQLGGPIAITRASVAAAQSGLESLVFLIALLSVNVAVLNLLPIPIL
                     DGGQILINIAEPVKGSPFSARTRENILRFGLVAILLIFVMSTFNDVVMGFKDIMAKLF
                     G"
     gene            1499..1759
                     /gene="rpsO"
                     /locus_tag="VFN38_13375"
     CDS             1499..1759
                     /gene="rpsO"
                     /locus_tag="VFN38_13375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HET9012808.1"
                     /translation="MAFDNAATLEKYKAHETDTGSARVQVALLTERINYLTDHFRAHK
                     KDHHGRRGLLKMVGTRRRLLNYMKRTDIDGYRKIVQELGLRY"
     gene            1870..>3634
                     /locus_tag="VFN38_13380"
     CDS             1870..>3634
                     /locus_tag="VFN38_13380"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004654 - polyribonucleotide
                     nucleotidyltransferase activity [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HET9012809.1"
                     /translation="MQRIEKTFAGRKLVIETGRMAKQAAGSCLVTYGDTMVLATVTVS
                     DNKSPLPFFPLTVEYKEKTYAAGKIPGGFIKREGRPSDGEILSCRIIDRSIRPLFPEG
                     FQNEVQVFCYVISADQENDADVLALVATSYALQSSRTPWNGPIAGVRVGRVQGNWILN
                     PTFQQLEYSDMELVVAGSSDSIMMVEGGALEVSEEDVVEAITVAHAGIKELIGYQNEL
                     MKASPKVDKMDWVKATVTDGLHDKVRAIADVKISEALNQKDKHSRVAAVEMVKKQVAE
                     TLSADMPDNAKEIHHILGDLEYNAMRSQVLSTKKRVDGRATNEVRPISIDLGLLPRAH
                     GSALFTRGQTQALVAVTLGTANDVQRLDSIDSPSETTKSFMLHYNFPPFSTGEVRPVR
                     GTSRREIGHGNLAERALQGVLPDFADFPYTLRIVSDILESNGSSSMATVCGGSLAMMD
                     AGVPIRGAVAGVAMGLIKEGKKYAILTDILGTEDHLGDMDFKVAGTATGITSIQMDIK
                     IEGLDLQIMKEALAQAKEGRLHILGEMDKALPTKRDDLSKYAPRIVTLMINPEKIGDL
                     IGPKGKTIRGIQDETGAELTVD"
BASE COUNT          637 a         1240 c         1239 g          518 t
ORIGIN      
        1 gcgaagctca cgggcgtgta cgcgccgcgc ttctcgatcg gcttcggccc cgcgctctgg
       61 cgccatcgcc gcggagagac ggaatacgtc ctcgccgcgc tgccgctcgg cgggtacgtg
      121 cggatggcct cgcgccacga cgccgagacc tcgttcatcg agggaggtgg cgaaggggag
      181 agcgacgcgc tgaagccggg gcagaagggc tacgatccgg atgcgatgct gccgttcggg
      241 ccgcggcccg tgccggagaa ccgctggttc gagtccaaga gcctcgccgc gcggctgttc
      301 atcatgatcg ccggcgtgac gatgaacatc ctgctggcga tcgtcgtgct cacgggtctg
      361 gcgctggcct acggcgagcc ggtgatcggc acgcgggtcg tcggggccgt gcaccccctc
      421 gccaccgcgc ccgccctcgc ccagctccag gcgggcgaca ccatcgtggc cgtgaacggc
      481 gcggcggtgc gcaactggaa cgagatcgcc gagcgcatcg acggcgcggc gccgggcccg
      541 gtggtgctgc ggaccaatcg gggagaggtc ccggtgcccg tcggcacgcc cggcgcgccc
      601 acgtcgcgcg aactcatcgg cgcggtcgac ttcttcatgg cgcccgtcat cggcgacgtg
      661 atgcccggca gccccgcccg gcgcgcgggc cttcgcgccg gcgacagcat cgtgacgatc
      721 ggcaacctgc cggtgcggag ctgggcgcag ctgcaggagc gggtgacccc ggcggcgggg
      781 accgacctgc ccttccaggt gcgtcgcggc ggcaggctgc tctccctgtc ggtgcggccg
      841 gagtccacgt cgcagaagga cccggccacc ggcgtcatgc gtccggtggg gaagatcggc
      901 gccgcggcgg cagatcccac gacccgcgag ccgatcggcg tcggcgacgc ggtggtggcg
      961 ggggtgcgcg gcacgtgggt cacggcgggg aagatcgtgg ggacggtgcg cgggctcatc
     1021 acccgcgagg tctcggtgcg ccagctcggc ggccccatcg ccatcacccg ggcgtcggtg
     1081 gccgcggcgc agagcgggct cgagtcgctg gtcttcctca tcgcgctcct gagcgtgaac
     1141 gtcgccgtgc tcaacctgct gcccatcccc atcctggacg ggggacagat cctgatcaac
     1201 atcgccgaac cggtgaaggg gagcccgttc agcgcccgca cgcgggagaa catcctgcgc
     1261 ttcggcctcg tcgcgatcct cctgatcttc gtgatgtcca ccttcaacga cgtcgtgatg
     1321 ggcttcaagg acatcatggc gaagctgttc ggctgagggc ggccggcctg gcggactccg
     1381 ggactcgcgg cagcgggcgt ccgggcttta cagaggggtg ccgcccggct aagttcccat
     1441 gctcaaccaa tttggctacg ctcagaccgc cgcttcggcg gggacagtcc agagagacat
     1501 ggctttcgac aacgctgcga cgctcgagaa gtacaaggcg cacgagaccg acaccggttc
     1561 ggcgcgagtg caggtggccc tcctcacgga gcgcatcaac tacctcaccg atcactttcg
     1621 ggcgcacaag aaggaccatc acggccgccg cgggctgctg aagatggtcg gcacccgtcg
     1681 ccgcctgctg aactacatga agcggacgga catcgacgga taccgcaaga tcgtgcagga
     1741 actcggactc cggtactaag ctggtccatt ggcacacgcg cgggcgcatc tatgcggccc
     1801 gcgcgttttg catttcacga agcgctgccg gcatcgggcc ggcggcacgc agagacgaag
     1861 agagcacaca tgcaacgcat tgaaaagacg ttcgcgggac gcaagctggt catcgagacc
     1921 ggccgcatgg ccaagcaggc cgccggctcc tgcctcgtca cctacggtga cacgatggtc
     1981 ctcgcgaccg tcacggtgag cgacaacaag agcccgctcc ccttcttccc gctcaccgtc
     2041 gagtacaagg aaaagacgta cgcggccggc aagatcccgg ggggcttcat caagcgcgaa
     2101 ggccgcccga gcgacggcga gatcctgagc tgccggatca tcgaccgctc catccgcccg
     2161 ctgttccccg aagggttcca gaacgaagtc caggtgttct gctacgtgat ctcggccgac
     2221 caggagaacg acgccgacgt cctcgcgctc gtcgcgacgt cgtacgcgct ccagtccagc
     2281 cggacgccgt ggaacggccc catcgccggc gtccgcgtcg gccgcgtgca gggcaactgg
     2341 atcctcaacc ccaccttcca gcagctcgag tacagcgaca tggagctggt cgtcgccggc
     2401 tccagcgact cgatcatgat ggtcgagggc ggtgcgctcg aggtgagcga ggaggacgtc
     2461 gtcgaggcca tcacggtggc acacgccggc atcaaggagc tcatcggcta ccagaacgag
     2521 ctgatgaagg ccagcccgaa agtcgacaag atggactggg tgaaggcgac cgtcaccgac
     2581 gggctccacg acaaggtgcg ggcgatcgcc gacgtgaaga tcagcgaggc gctgaaccag
     2641 aaggacaagc actcgcgcgt cgccgccgtc gagatggtca agaagcaggt cgccgagacg
     2701 ctctccgccg acatgcccga caacgccaag gagatccacc acatcctcgg cgatctcgag
     2761 tacaacgcga tgcgttcgca ggtgctgtcg accaagaagc gggtcgacgg ccgcgccacc
     2821 aacgaggtgc gtccgatctc gatcgacctc gggctgctgc cgcgcgcgca tggttcggcg
     2881 ctgttcactc gcggccagac ccaggcgctc gtcgccgtca ccctcggcac ggcgaacgac
     2941 gtccagcggc tcgattcgat cgactcgccc agcgagacga cgaagtcgtt catgctgcac
     3001 tacaacttcc ccccgttctc cacgggcgag gtgcggccgg tgcgcggcac ctcgcgccgc
     3061 gagatcggac acggcaacct ggccgagcgc gcgctccagg gcgtgctgcc cgacttcgcc
     3121 gacttcccgt acaccctccg catcgtgtcg gacatcctcg agtccaacgg ctcgagctcg
     3181 atggccacgg tgtgcggcgg ctcgctcgcg atgatggacg ccggcgtgcc gatccgcggc
     3241 gcggtggccg gcgtggcgat ggggctgatc aaggaaggga agaagtacgc gatcctcacc
     3301 gacatcctcg gcaccgagga tcacctcggc gacatggact tcaaggtggc cggcacggcc
     3361 accgggatca cctcgatcca gatggacatc aagatcgagg ggctcgacct ccagatcatg
     3421 aaggaggcgc tcgcgcaggc caaggaaggc cgcctgcaca tcctcggtga gatggacaag
     3481 gcgctgccga caaagcgcga cgacctgtcg aagtacgcgc cgcgcatcgt caccctgatg
     3541 atcaaccccg agaagatcgg cgacctgatc ggaccgaagg gcaagaccat ccgcggcatt
     3601 caggacgaga cgggggccga actgacggtc gacg
//
LOCUS       DASSYW010000840         2062 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1831728, whole genome shotgun sequence.
ACCESSION   DASSYW010000840 DASSYW010000000
VERSION     DASSYW010000840.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2062)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2062)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2062
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1831728"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(55..534)
                     /locus_tag="VFN38_13385"
     CDS             complement(55..534)
                     /locus_tag="VFN38_13385"
                     /inference="COORDINATES: protein motif:HMM:NF019095.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHRD domain-containing protein"
                     /protein_id="HET9012810.1"
                     /translation="MRVRLFASATMLAAAGFVACNDSTTAPTSTTFVATMTGANERPT
                     PNASTATGTATYVLTGNLLSYVVTVNGLTAPASGAHIHVGASTVAGPIVVPYTVSATQ
                     SGVVSTGTIDLTYPIASGNSTITGDSLKVLLNNGNAYTNVHNSSFPGGEIRGQIVKQ"
     gene            complement(717..1577)
                     /locus_tag="VFN38_13390"
     CDS             complement(717..1577)
                     /locus_tag="VFN38_13390"
                     /inference="COORDINATES: protein motif:HMM:NF025887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4440 domain-containing protein"
                     /protein_id="HET9012811.1"
                     /translation="MSYAEEAHDALLRADLSRADSVAHLGFAAGLASNFTDDVVYLRG
                     GLPIVRGRAAAATIVAAESLGSGTAVKWQPVRAEVSADGQSGYSYGFTIFASPAGGTA
                     VPALRVDRYISFWRRSPQGWRISAYAETYGSPPPALALPSTAEGAVLGDAPMPRARGP
                     LEQMRAADTAFSALAQRVGTGRAFGDFAAEDATIFSTPGEFITGPRAISESFGPSENS
                     GALVWHPVVGEVSRSGDLGYTVGTAVYTGRREDGGQVVRYSKYLTVWKKQRDGGWRYV
                     VDGGSARPNQ"
BASE COUNT          299 a          705 c          740 g          318 t
ORIGIN      
        1 catccccgca gtcgatcctg ctctgcgccc cgttcggacg acggagcgcg cccgctactg
       61 cttgacgatc tggccgcgga tctcgccgcc ggggaacgag gagttgtgca cgttcgtgta
      121 ggcgttaccg ttgttgagca gcaccttgag cgagtcgccg gtgatggtgc tgttgccgct
      181 cgcgatggga taggtgaggt cgatggtccc cgtgctcacc acgccgctct gcgtcgccga
      241 tacggtgtag ggcacgacga tcggtccggc gacggtgctg gcgccgacgt ggatgtgcgc
      301 gcccgacgcc ggcgcggtga gcccgttcac cgtcacgacg tacgacagca ggttgcccgt
      361 cagcacgtag gtggccgtgc cggttgcggt cgacgcgttg ggcgtcggtc gctcgttcgc
      421 acccgtcatc gtggcgacga aggttgtgct ggtcggcgcg gtcgtcgagt cgttgcaggc
      481 gacgaatccg gcagcggcga gcatggtcgc gctggcgaaa aggcgtacgc gcatgaatcc
      541 tcctgtcctg cggtgggcga gcgaaagagt tgccaccgtg cgctaccgca aggaatgccg
      601 cgcctatcgg cgcgcgctca actctttgtc atggccccgc ttacacgcgc cgccggcgat
      661 cacgccgtcg cgccggtcgt atcacggcgt gacggtggcg tatcgcttca ttacgtctac
      721 tgattcgggc gggcgcttcc gccgtcgacg acgtatcgcc agccgccgtc gcgctgcttc
      781 ttccagacgg tgagatactt ggagtagcgc acgacctggc cgccatcctc gcgtcgcccg
      841 gtgtagaccg cggtgcccac ggtgtagccc agatcgcccg agcgcgacac ttcgccgacg
      901 acgggatgcc agacgagcgc cccgctgttc tccgacgggc cgaacgactc gctgatcgcg
      961 cgtggtccgg tgatgaactc gcccggcgtg gagaagatcg tggcgtcctc cgcggcgaag
     1021 tcgccaaagg cgcggccggt gccgacgcgt tgcgcgagcg ccgagaaggc ggtgtcggct
     1081 gcgcgcatct gctcgagcgg gccccgggca cgtggcatcg gtgcgtcgcc gagcacggcc
     1141 ccttccgccg tggagggcag cgcgagcgcg gggggtggcg agccgtacgt ctcggcgtac
     1201 gccgagatcc gccacccctg cgggctgcgg cgccagaacg agatgtagcg gtcgacgcgg
     1261 agcgcgggca cggccgtgcc gccggccggc gacgcgaaga tggtgaagcc gtagctgtag
     1321 ccgctctgtc cgtcggcgct cacctcggcg cgcaccggct gccacttcac cgcggtgccg
     1381 ctgccgaggg attccgcggc gacgatcgtc gccgcggccg cacggccgcg cacgatgggc
     1441 agaccgccgc gcaggtagac gacgtcgtcg gtgaagttgc tcgcgaggcc ggccgcgaaa
     1501 ccgaggtgcg ccaccgagtc cgcccgggac agatcggcgc gcaggagggc gtcgtgcgcc
     1561 tcttccgcgt aggacaacgg cgtcagcagc gatgcgccgg cgaaggacgc tcctggcgac
     1621 tgagaaccac gatggcacgc cgtcacggcc agtgccgtca gcagaacaac cgggagattc
     1681 cgcacgccca cgctccgtcg cgccgggtga tgatgacggg gtgctcgccc cgttctctga
     1741 gactactgcc gaaccttccg ccacgccact ccgtcacgcg gccagacggg acgcggtgac
     1801 agatgtagat tgggtggttg gtacccggcg tgaggccggt cggcccgctg cgcggtcccg
     1861 accgggagag cgcccgccag tgatctcatc gcccgctcgt gacgacacct cgcaaacgac
     1921 cagtgcgccg gcgcggcacg gctgccccgc agctcacgtc cacatcgacg agccgcacgg
     1981 catacgccga aacgaagcgc tggctcatcg cgcagcatgg gccggtgtgc gcatactgcg
     2041 ggcggcgtgt ctctgccgcg ag
//
LOCUS       DASSYW010000841         2778 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1559082, whole genome shotgun sequence.
ACCESSION   DASSYW010000841 DASSYW010000000
VERSION     DASSYW010000841.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2778)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2778)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2778
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1559082"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..624
                     /locus_tag="VFN38_13395"
     CDS             <1..624
                     /locus_tag="VFN38_13395"
                     /inference="COORDINATES: protein motif:HMM:NF024674.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00282 family metallophosphoesterase"
                     /protein_id="HET9012812.1"
                     /translation="SYGIAVMTSGNHIWDKKEVLDYIPQQPRLLRPANFPAGVPGTGR
                     FLAETASGQPVGVINVMGRVFMQPLDDPFAVVLREIEVLRAKARVILVDFHAEATSEK
                     IAMGWHLEGKVTAVVGTHTHVQTADERVLPGGTAYITDVGMTGPHDSIIGVEKSAALG
                     RFLNGLPTRFEAAAGDPKLHAVVIGADASTGKATAISRVSLTAADLT"
     gene            621..2117
                     /gene="xseA"
                     /locus_tag="VFN38_13400"
     CDS             621..2117
                     /gene="xseA"
                     /locus_tag="VFN38_13400"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR00237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HET9012813.1"
                     /translation="MREDLFDLPFEEPAPDPELEVREAPPGVSDTSARAAERRVITVS
                     ELTAAIREALESRFFEVFVEGEISNCKVWNTGHMYFSLKDERAQVKAIMFRSALRYLK
                     FKPEDGLHVIARGRVSVYEPKGEYQFVCEHLEPHGFGARQVAFEQLKKKLQAEGLFDG
                     ARKRPLPVLPRKIGIVTSLDGAALRDIIQVLRRRYPNAHLVIRPTRVQGEGAAAEIAH
                     AVRAIGRVAGVDVAIVGRGGGSAEDLWAFNEEPVARAIAAAPMPIISAVGHEVDYTIA
                     DFVADLRAPTPSAAAEIVVKAKEEYCSRIDRLRDRLRASMRHDLQQRRGRVHALLARR
                     GFGAFTGRIGMRGRHAAELSHALAHATREHVARRERQLTRARLRLESLDLRRRLALVR
                     GRLVAADGKMTAAASRRQQRLDGRLRALAGQLETLSPLGVLSRGYALAWNADRSAIIR
                     TAEAVTPGDRVHVTLQHGELSCDVVSVSDTHPRAGNGTPEPENPEPRR"
     gene            2114..2362
                     /gene="xseB"
                     /locus_tag="VFN38_13405"
     CDS             2114..2362
                     /gene="xseB"
                     /locus_tag="VFN38_13405"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005125145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HET9012814.1"
                     /translation="MTDTIKDFESAIAELESVVKTLEEGDLPLEKSLQLFERGVQLSR
                     FCHAQLEEAEKRIELLNERGELRPAPASFGTDEGEKTR"
     gene            2359..>2778
                     /locus_tag="VFN38_13410"
     CDS             2359..>2778
                     /locus_tag="VFN38_13410"
                     /inference="COORDINATES: protein motif:HMM:NF012568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HET9012815.1"
                     /translation="MTPVLERSVERLRAEVERALRDLVVAPDTPPGLAEALRYPVAAG
                     GKRLRPVLCLASAEAVAPPTDDDAARARGQALHAACAIELIHTYSLVHDDLPAMDNDT
                     LRRGRPTVHVVYSDGLAVLVGDGLLTRAFQLLAEQPDP"
BASE COUNT          466 a          926 c          969 g          417 t
ORIGIN      
        1 agctacggca tcgctgtgat gacctcgggc aaccacatct gggacaagaa ggaagtcctc
       61 gactacatcc cgcagcagcc acggttgctg cgcccggcga acttcccggc gggcgttccg
      121 ggcactggcc ggttcctggc cgagacggcg agcggccagc cggtgggcgt catcaacgtc
      181 atggggcgcg tgttcatgca gccgctcgac gatccgtttg ccgtcgtctt gagggagatc
      241 gaggtcctgc gggcgaaggc ccgtgtgatt ctcgtggact tccacgcgga ggcgacctca
      301 gagaagatcg ccatgggctg gcacctcgaa ggcaaggtga cggcagtcgt ggggacgcat
      361 acccacgtgc agacggcgga cgagagggtc ttgcccggtg gaacggcgta tatcaccgac
      421 gtcgggatga ccggcccgca cgattcgatc atcggcgtcg agaagagcgc ggcgctcggc
      481 cggttcttga atggcctccc cacgcgcttc gaggcggcgg ccggcgatcc gaagctgcac
      541 gccgtggtga tcggcgcgga cgcttcaaca gggaaagcca ccgcgatttc gcgcgtcagc
      601 ctgacggctg ccgatctgac atgagagagg acctgttcga tcttccgttc gaggagccgg
      661 cgcccgatcc cgaactcgag gtgcgcgagg ccccgcccgg cgtgtcggac acttcggcgc
      721 gagcagcgga acggcgcgtc atcaccgtga gcgaactgac ggccgccatt cgcgaggcgc
      781 tggagtcccg gttcttcgag gtgttcgtcg agggggagat ctcgaactgc aaggtctgga
      841 acaccgggca catgtacttc tcgctcaagg acgagcgcgc gcaggtcaag gcgatcatgt
      901 tccggtcggc gctgcgctac ctcaagttca agcccgagga cggcctgcac gtgatcgcgc
      961 gcggacgcgt cagcgtgtac gagccgaagg gagagtacca gttcgtctgc gagcacctcg
     1021 agccgcacgg attcggtgcg cgccaggtcg cgttcgagca gctgaagaag aagttgcagg
     1081 cggagggcct gttcgatggc gcgcgcaagc ggccactgcc tgttctgccg cggaagatcg
     1141 ggatcgtgac ctcgctcgac ggcgccgcgt tgcgcgacat cattcaagtc ctgcgacggc
     1201 ggtaccccaa cgcccacctg gtcattcggc cgacacgggt ccagggggaa ggggccgccg
     1261 ccgagatcgc gcacgcggtc cgggccatcg ggagggttgc gggagtcgac gtcgcgattg
     1321 tcggacgggg cggtggctcg gccgaagacc tctgggcgtt caacgaagag cctgtcgcgc
     1381 gggcgatcgc ggcggcgccg atgccgatca tctccgccgt cggccacgaa gtggactaca
     1441 cgattgcgga cttcgtcgcg gacctgcgcg cgcccacacc ctccgcggcg gcggaaatcg
     1501 tcgtcaaggc caaggaagaa tattgctcgc ggatcgatcg cctgcgcgat cggcttcgcg
     1561 cgtcgatgcg ccacgatctt cagcagcgac gtggccgtgt ccatgcgctc ctggcacgcc
     1621 gtggcttcgg cgcgttcacg gggcggatcg ggatgcgggg ccgccacgcg gcagagttgt
     1681 cgcacgcgct ggcgcatgcc actcgcgagc acgtcgcgcg ccgagagcgt cagctgaccc
     1741 gtgcgcgcct ccgcctggag tcgttggacc tgcgacgacg cctcgccctc gtgcgggggc
     1801 ggctcgtggc ggccgatggg aagatgaccg cggccgccag ccgacgccaa cagcggctcg
     1861 atggccgcct ccgagcactc gcgggacagc tcgagacgct cagcccgctt ggggtgctct
     1921 cgcgcggcta cgcgctcgcg tggaacgccg accgatcagc catcatccgg actgccgagg
     1981 cagtcacccc cggtgaccgc gtgcacgtga cgttgcagca cggagagctc tcgtgtgatg
     2041 tcgtgtcggt aagcgacacg cacccgcgcg ccggaaacgg aaccccggag cccgagaacc
     2101 cggaaccacg aagatgaccg acacgatcaa agacttcgag tccgccatcg ccgaactcga
     2161 gagcgtggtg aaaacgctcg aagagggaga cctgcccctc gagaaatcac tgcagctctt
     2221 cgagcgcggc gtgcagttgt cccgcttctg ccacgcgcag ctcgaagagg ccgagaagcg
     2281 gatcgagctg ctcaacgaac ggggcgagtt gcggccggcg ccggcctcat tcggcaccga
     2341 cgagggcgag aagacgcggt gacgccggtg ctggagcggt cggtcgagcg cctccgcgcc
     2401 gaagtcgagc gtgccctccg cgatctggtc gtcgcgcctg acacgccacc aggcctcgcc
     2461 gaggcgctcc gctaccctgt cgccgccggc gggaagcggc tccgaccggt actttgcctg
     2521 gcgtccgccg aagccgtggc gccgccaacc gacgatgacg ctgcgcgggc gcgcggccag
     2581 gccctgcacg ccgcgtgcgc gatagaactc atccacacct actctctcgt gcacgacgac
     2641 ctgccggcga tggacaacga cacgctgcgc cgcggacgac cgacagtgca cgtcgtgtac
     2701 agcgatggac ttgccgtgct cgtcggcgac gggctgctga cgcgtgcctt tcagttgctc
     2761 gccgaacaac ccgatccc
//
LOCUS       DASSYW010000842         3508 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1555051, whole genome shotgun sequence.
ACCESSION   DASSYW010000842 DASSYW010000000
VERSION     DASSYW010000842.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3508)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3508)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3508
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1555051"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            162..1154
                     /locus_tag="VFN38_13415"
     CDS             162..1154
                     /locus_tag="VFN38_13415"
                     /inference="COORDINATES: protein motif:HMM:NF037660.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HET9012816.1"
                     /translation="MFASQPDPLLTTAQQLADAGAWRELIVLLAPRSDGGLASGEETL
                     LYAEALMRSGQERQALAVLRDLEPVLADDADRALYRRAINMLGAAHLSLGALDSATAA
                     FARAMDLATEENDLLVLARATNNLGAIANLQGDRERALGHYRLAVPIFQRLGQRRGLA
                     SSYHNMAITFRDLGELKEADENEQKAIEYAGDGQFPRLAAMGRVGRAEIALRAGDVQL
                     AESTARVAIEELASLGDPLNQADAHRVVGAACGAQQRYDEALAAFDRALAIAREHGHA
                     LIEAETLRDRVDVNVRLGRRAAALEDALASTTIFEKLGATTEVEALRARMEELR"
     gene            complement(1255..1773)
                     /locus_tag="VFN38_13420"
     CDS             complement(1255..1773)
                     /locus_tag="VFN38_13420"
                     /inference="COORDINATES: protein motif:HMM:NF012575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske (2Fe-2S) protein"
                     /protein_id="HET9012817.1"
                     /translation="MTEHPDCTSCPLDPDRREFLRTVTTALASLGLLGLLPRDADAAS
                     VRAIAALAPAPGDRRDEKRYPMPAADGVSIDKDNSVIVARAAGKVYAFSLACPHQNTA
                     LRWDDGDHEFHCPKHKSRYRADGTFIEGRATRDMDRLVVRRDGATLVVDIDSLIQQDE
                     HPAEWAAAFVLL"
     gene            complement(1773..2276)
                     /locus_tag="VFN38_13425"
     CDS             complement(1773..2276)
                     /locus_tag="VFN38_13425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012818.1"
                     /translation="MILVPQLLTDLADPWAKLYSHSKVAATIVTFLHIAPIVVGGGLA
                     IALDRSTLRLRHDEPGARARHLAELGGAHRVVLGALGVSFLSGVALFASDVETFYPSW
                     VFWLKMGLIALLLVNGALMTRVERSLRVAGATADAQWRRLRTIAITSLALWLAVTLAG
                     VILTNIA"
     gene            complement(2286..2867)
                     /locus_tag="VFN38_13430"
     CDS             complement(2286..2867)
                     /locus_tag="VFN38_13430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012819.1"
                     /translation="MMLVLQLATAAALAAVPPSPSAVVDTVARAEGTRLAVADGDTIP
                     RRRPRAVEVSDAYELRLRIHRYASYTMIPLFVAQSVAGNQLYQTGGGEPSWAKSMHSL
                     GAGGLAALFTVNTVTGVWNLWESRGVSEGRTAKLLHSALMLASDAGFTYAGVKLGPDA
                     RNSAARRDEHRRVAYISMGGALAGYAVMLVANR"
     gene            complement(2869..3234)
                     /locus_tag="VFN38_13435"
     CDS             complement(2869..3234)
                     /locus_tag="VFN38_13435"
                     /inference="COORDINATES: protein motif:HMM:NF012355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /protein_id="HET9012820.1"
                     /translation="MRFRLVSALLIAAACGGGGGSDGGPTAPIIPSTPATPVATTSVS
                     LQSNLFNPENIVVSPSAVVTFTNNDNIAHNVVFANQAIGSVGQWSSGDRTITMPATAG
                     TYSYTCTIHAGMNGTVKVQ"
BASE COUNT          540 a         1185 c         1273 g          510 t
ORIGIN      
        1 atgcaggcgt cgttgagtgt gtggcggcag gaagcgccgt tccagccgtg gacgaaggtt
       61 ccgagcacgg tgctgacgag cacgaaggac atccaggcag cgctcggcgg cttcacgggt
      121 tacgcgatcg agtactgacc agcactcacg acgccagcgc catgttcgcc tcgcaacccg
      181 acccccttct gacgacggcg cagcagctcg ccgacgccgg ggcgtggcgc gagctcatcg
      241 tgctgctcgc gccgcggtcg gacggcggtc tggcctccgg cgaggaaacc ctgctgtacg
      301 cggaggcatt gatgcgctcc ggccaggaac gccaggcgct cgccgtgctg cgggatctcg
      361 agcccgtgct cgccgacgat gccgaccgcg ccctgtatcg tcgcgccatc aacatgctgg
      421 gcgcggcgca cctgtcgctg ggcgcgctcg attccgccac ggcggcgttc gcgcgcgcga
      481 tggacctcgc caccgaggag aacgacctcc tcgtgctggc ccgcgccacg aacaacctgg
      541 gcgcgatcgc caacctccag ggggatcggg agcgcgcgct ggggcattac cgactcgccg
      601 ttcccatctt tcagcggctc gggcagcgtc gcgggctcgc gtcgtcctac cacaacatgg
      661 ccatcacctt ccgcgacctc ggcgagctga aggaggcgga cgagaacgag cagaaggcca
      721 tcgagtacgc cggagacggg cagttcccgc gcctcgcggc gatgggccgc gtcggacggg
      781 cggagatcgc cctgcgggcg ggcgatgtcc agctcgccga atcgacggcg cgcgtggcga
      841 tcgaggagct ggcctcgctc ggcgacccgc tcaaccaggc cgacgcccac cgcgtcgtcg
      901 gcgcggcctg tggcgcgcag cagcgctacg acgaggcgct ggccgcattc gatcgggcgc
      961 tcgcgatcgc gcgcgagcac ggccatgcgc tcatcgaggc ggagacgttg cgcgatcgcg
     1021 tggacgtgaa cgtgcgcctc ggccgtcggg ccgcggcact cgaggacgcg ctcgcctcga
     1081 ccacgatctt cgagaagctc ggcgcgacga cggaggtcga ggcgttgcgg gcaaggatgg
     1141 aggaactgcg gtgaagccgt gaggccgtta agccgtaagc agacagggca caccggactg
     1201 gttccgatgt gcccttcgtc gttcaccgcc gcaccgcctc acggcctcac ggcttcacag
     1261 cagtacgaac gccgccgccc actcggccgg gtgctcgtcc tgctggatga gcgagtcgat
     1321 gtccaccacc agcgtggcgc catcgcggcg caccacgaga cggtccatgt cgcgcgtcgc
     1381 gcggccttcg atgaaggtgc cgtcggcgcg atagcgcgac ttgtgcttcg gacagtggaa
     1441 ctcgtggtcg ccgtcgtccc agcgcagcgc ggtgttctgg tgagggcagg ccagcgagaa
     1501 cgcgtacacc ttgccggcgg cacgcgcgac gatcacgctg ttgtccttgt cgatcgagac
     1561 gccgtccgcg gcgggcatcg ggtagcgctt ctcgtcgcgc cggtcgccgg gcgcgggcgc
     1621 gagcgccgcg atcgcgcgca ccgacgcggc gtcggcgtcg cgcggcagca ggccaagcag
     1681 gccgagcgac gcaagggccg tcgtgacggt gcgcaggaac tcgcgccggt cgggatccag
     1741 cggacagctg gtgcagtcgg gatgctcggt catcaggcga tgttcgtgag gatcacgccg
     1801 gccagcgtga ccgcgagcca gagggcgagg ctggtgatgg cgatcgtgcg gagccggcgc
     1861 cactgcgcat cggcggtggc accggcgacg cgcagcgacc gctcgacgcg ggtcatgagc
     1921 gcgccgttca cgagcagcag cgcgatgagc cccatcttga gccagaacac ccacgacggg
     1981 tagaaggtct ccacgtcgga cgcgaagagc gccaccccgg acaggaagga gacgccgagc
     2041 gcgcccagca cgacacggtg cgcgccaccc agctcggcga gatgacgcgc gcgggctccc
     2101 ggctcgtcgt gccgaaggcg cagcgtcgac cggtccagcg cgatcgccag cccgccgccc
     2161 acgacgattg gagcgatgtg gagaaaggtg acgatcgtcg cggcgacctt ggagtggctg
     2221 tagagcttcg cccacgggtc ggcgagatcg gtgagcagct gcggaacgag gatcatggac
     2281 ggttcttagc ggttggcgac gagcatgacg gcgtatccgg cgagcgcccc gcccatggag
     2341 atgtaggcga ctcgccgatg ctcgtctcga cgtgcggcgg agttcctggc gtcggggccg
     2401 agcttgacgc cggcgtaggt gaagccggcg tcggaggcca gcatgagcgc gctgtgcagc
     2461 agcttcgcgg tccggccctc gctcacgccg cgcgactccc agagattcca cacgccggtc
     2521 accgtgttca cggtgaacag cgcggccaga ccgccggcgc cgaggctgtg catcgacttg
     2581 gcccacgacg gttcgccgcc gcccgtctga tagagctggt tgcccgccac cgactgcgcg
     2641 acgaacagtg gaatcatcgt gtacgacgca taccggtgga ttcgcagccg cagctcgtag
     2701 gcgtcgctca cctccaccgc ccgtgggcgg cggcgaggga tcgtgtcgcc gtccgccacg
     2761 gccaggcgcg tcccctcggc gcgcgcgacg gtgtcgacga cggccgacgg cgacgggggc
     2821 accgcggcga gcgccgcggc ggtcgcgagc tgcaggacga gcatcatgtc attgcacctt
     2881 gacggttccg ttcatgccgg cgtggatcgt acaggtgtag ctgtaggtgc cggcggtcgc
     2941 cggcatcgtg atggtgcggt cgcccgagct ccactggccc accgagccga tggcctggtt
     3001 cgcgaagacc acgttgtgcg cgatgttgtc gttgttggtg aaggtgacga cggccgacgg
     3061 cgacacgacg atgttctccg gattgaacag gttgctctgg agcgacacgg acgtggtggc
     3121 caccggggtg gccggcgtcg aggggatgat cggggccgtc ggcccgccat ccgatcctcc
     3181 accgcctcca cacgcggcgg caatgagcag tgcggacacg agacggaagc gcatcgttct
     3241 ctcctggcat ggggtcgtcc ggcgattccg gatgccccga cgtatcagca aggagtgcga
     3301 cctgtgccgt ctcggcgcca agtcattgtc gtcccaccag ttactcggga cgccgcgcaa
     3361 gcgttgggcc gctgtccgta tcgcggtgtg acatgggcgt atcggatcgt tccgaccgcc
     3421 ggcggcccgg aacccgagct atcgggtgta cccgtgccgg agccgctcgc cctggagcgc
     3481 cgtgtcggcc atccgggaga cgatcgcc
//
LOCUS       DASSYW010000843         2664 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1573533, whole genome shotgun sequence.
ACCESSION   DASSYW010000843 DASSYW010000000
VERSION     DASSYW010000843.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2664)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2664)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2664
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1573533"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..829)
                     /locus_tag="VFN38_13440"
     CDS             complement(<1..829)
                     /locus_tag="VFN38_13440"
                     /inference="COORDINATES: protein motif:HMM:NF044706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012821.1"
                     /translation="MLGRPPNVPRRAGRPAHIDLADIQGNVLRGYTMPAAAYLFLRIV
                     HVERARALMRRMLPQVMTAAPWSSPPATAMNVAFTFAGLSELELADDVLGSFPEAFRD
                     GMAARSARLGDRGPSAPGTWEFHGAHVLVTVYAVDAEHLRAALASILSADVENGVELV
                     WLQRAEALAGGKDHFGFFDGIAQPAIAGSGVEPRPGDGQPDGAGGWRDVATGEVLLGY
                     ADEDGTLPAAPLAPFDRNGTFVVYRKLRMDAAAFRRYVQSAGFPGGPELLAAKLVGRW
                     "
     gene            complement(829..1383)
                     /locus_tag="VFN38_13445"
     CDS             complement(829..1383)
                     /locus_tag="VFN38_13445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012822.1"
                     /translation="MLRRIFDRGNRIGTAYALTTFARVLPGRADELEAYLGALPRGTG
                     SPFARIGTLHIARVQLFRSLVHQGPKQRRTDVLQNAHLVFTSTIDGELDAYLDALCAH
                     VPECDEWWGRCAGYPGRDDAAAFRAYVRSIQARPGLFQSAMPSASVTVVRESLALREQ
                     VIDFAVAAQGLDAAELQARFRAEF"
     gene            complement(1364..1882)
                     /locus_tag="VFN38_13450"
     CDS             complement(1364..1882)
                     /locus_tag="VFN38_13450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012823.1"
                     /translation="MTGLTLFTPIRRRWLWMLWIGLPVTRHLGFMGRHILQFNFIKFV
                     RWTVVPGLDGERLRYRYLFFESNFDGPWQHYIDAFAYVIPLDIRVTWGRGPGFPHPPP
                     AEPLKAWIAMYSKEGGTYYCAHAEASTREVNNAVAVRERFEALRRDAARLSPDEFKAA
                     WEGFLTDAQAHL"
     gene            complement(1912..2448)
                     /locus_tag="VFN38_13455"
     CDS             complement(1912..2448)
                     /locus_tag="VFN38_13455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012824.1"
                     /translation="MSASNVAGRMTGLTLFTPVRRQWHWFLWTGLKVTRHLPFMARHI
                     LQFNFIKFVRWTVVPGLDGEKLHYPYLFFESNFDGPWQHYIDAFAYVIPLDIRVTWGR
                     GPGFPAPPPAEAIAYTKEICRYLVETYGRFPAHTDPFHLPGIWVQFSHAEIEYYEQFA
                     SERHIQRQREGREIWDRQ"
     gene            complement(2445..>2664)
                     /locus_tag="VFN38_13460"
     CDS             complement(2445..>2664)
                     /locus_tag="VFN38_13460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012825.1"
                     /translation="AGPPPAEAIAYTKEICRYLVDTYGRFPAHTDAFHLPGIWVQFSH
                     LEIEYYERYASERHVRRQAEGREIWDRR"
BASE COUNT          400 a          956 c          951 g          357 t
ORIGIN      
        1 gccagcggcc gacgagcttc gccgccagca gctccggccc gccggggaag ccggcggact
       61 gcacgtagcg gcggaacgcg gccgcgtcca tgcgcagctt gcggtagacg acgaaggtgc
      121 cgttgcggtc gaacggcgcg agcggcgccg ccggcagcgt gccgtcctcg tcagcgtagc
      181 ccaggagcac ctcgccggtc gccacgtcgc gccagccgcc ggcgccgtcg ggctgcccgt
      241 caccgggtcg cggctcgacg cccgagcccg cgatcgccgg ctgcgcgatg ccgtcgaaga
      301 acccgaagtg gtccttgccg ccggccagcg cctcggcgcg ctgcagccac acgagctcga
      361 ccccgttctc gacgtcggcg gagaggatcg aggcaagggc cgcgcgcagg tgctcggcgt
      421 cgacggcgta gaccgtgacc agcacgtgcg cgccgtggaa ctcccacgtg ccgggcgcgc
      481 tcggcccgcg gtcgccaagc cgggcggacc gcgccgccat cccgtcgcgg aacgcctccg
      541 ggaaggagcc gagcacgtcg tcggcgagct cgagctcgga cagcccggcg aacgtgaagg
      601 ccacgttcat cgcggtcgcc ggcggcgacg accacggcgc cgccgtcatc acctgcggca
      661 gcatccgccg catcagcgcc cgcgcacgct cgacgtgcac gatccgcagg aagaggtacg
      721 ccgccgcggg catcgtgtag ccgcgcagga cgttgccctg gatgtcggcg aggtcgatgt
      781 gcgccggcct gcccgccctg cgcgggacgt tcggcgggcg gcccagcatc agaactcggc
      841 gcggaagcgg gcctgcagct cggcggcgtc gaggccctgc gcggcgacgg cgaagtcgat
      901 cacctgctcg cgcagcgcca gcgactcgcg cacgacggtc accgacgcgc tcggcatcgc
      961 cgactggaac aacccgggcc gcgcctggat cgagcgcacg tacgcgcgga acgcggccgc
     1021 gtcgtcccgt cccggatagc cggcgcagcg cccccaccac tcgtcgcact ccgggacgtg
     1081 cgcgcacagc gcgtcgaggt acgcgtccag ctcgccgtcg atcgtggacg tgaacacgag
     1141 atgagcattc tgcaggacat cggtgcggcg ctgcttcggt ccctggtgga ccagcgagcg
     1201 gaacagctgc acgcgggcga tgtggagcgt gccgatccgc gcgaacggcg agccggtgcc
     1261 gcgcggcagg gcgccgagat acgcctcgag ctcgtccgcg cgccccggca gcacgcgcgc
     1321 gaaggtcgtc agcgcgtacg cggtcccgat ccggttgccg cggtcaaaga tgcgcctgag
     1381 catccgtcag gaatccttcc caggcggcct tgaactcgtc cggcgacagt cgcgcggcgt
     1441 cgcggcgcag ggcctcgaag cgctcgcgca ccgcgaccgc gttgttgacc tcgcgcgtcg
     1501 acgcctcggc gtgcgcgcag tagtacgtcc cgccctcctt cgagtacatc gcgatccacg
     1561 ccttcagcgg ctcggccggc ggcgggtgcg ggaacccggg cccgcgcccc cacgtgacgc
     1621 ggatgtccag cgggatcacg tacgcgaacg cgtcgatgta gtgctgccac ggcccgtcga
     1681 agttgctctc gaagaacagg taccggtagc gcagccgctc gccgtccagg cccggcacga
     1741 ccgtccagcg cacgaacttg atgaagttga actgcaggat gtggcggccc atgaacccca
     1801 ggtgccgcgt caccggcagg ccgatccaca gcatccacag ccagcgcctg cggatcggcg
     1861 tgaacagtgt caggccggtc atgcgaccgg ccacgttgcc gcctgcagct tctattggcg
     1921 atcccagatc tcgcgccctt cgcgctggcg ctggatgtgg cgctcggacg cgaactgctc
     1981 gtagtactcg atctccgcgt gcgagaactg cacccagatg ccgggcaggt ggaacgggtc
     2041 ggtgtgcgcc gggaagcgcc cgtaggtctc caccaggtag cggcagatct ccttggtgta
     2101 ggcgatcgcc tcggccggcg gcggcgccgg gaagcccggg ccgcgccccc aggtcacccg
     2161 gatgtcgagc gggatcacgt acgcgaacgc gtcgatgtag tgctgccagg gcccgtcgaa
     2221 gttgctctcg aagaacaggt acgggtagtg cagcttctcc ccgtccagcc cgggcacgac
     2281 ggtccagcgc acgaacttga tgaagttgaa ctgcaggatg tggcgggcca tgaacggcag
     2341 gtgccgcgtg accttcagcc cggtccacag gaaccagtgc cactggcggc gcaccggcgt
     2401 gaacagcgtg aggccggtca tgcgaccggc cacgttgctc gcgctcacct gcggtcccag
     2461 atctcccggc cttcggcctg ccggcgcacg tggcgctctg acgcgtagcg ctcgtagtac
     2521 tcgatctcca ggtgcgagaa ctgcacccag atgccgggca ggtggaacgc gtcggtgtgc
     2581 gccgggaagc gcccgtaggt gtccacgagg tagcggcaga tctccttcgt gtaggcgatc
     2641 gcctcggcgg gcggcgggcc ggcg
//
LOCUS       DASSYW010000844         2291 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_138693, whole genome shotgun sequence.
ACCESSION   DASSYW010000844 DASSYW010000000
VERSION     DASSYW010000844.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2291)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2291)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2291
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_138693"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..464
                     /locus_tag="VFN38_13465"
     CDS             <1..464
                     /locus_tag="VFN38_13465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012826.1"
                     /translation="PWWARQGNARWVASRRRFRTLLDDQARLERMARIIGKDALPAAQ
                     QLTLLCAELVGEAFLRQSAFSEIDRGCSPARQAAMMRVLCRFIDLAEGALAAGIEPER
                     IAALGGMRSLQRMGEEIADHELARFDELEARIEREFAQLAPAREASDAAHG"
     gene            448..1821
                     /locus_tag="VFN38_13470"
     CDS             448..1821
                     /locus_tag="VFN38_13470"
                     /inference="COORDINATES: protein motif:HMM:NF003235.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="V-type ATP synthase subunit B"
                     /protein_id="HET9012827.1"
                     /translation="MQLTVEGAATRLEGPLLFLRRTLDVGLNDAVDVRGADGRRRFGR
                     VAAIDEQFLTIEVLESTAGMALESTVVRFRGEPLAFDLGPGLLGRVFNGVGQVIDGGP
                     PVATERRMPIDGLPMNPVARAMPRDFIETGITALDLLNSLVRGQKLPLFSGGGLPHDR
                     LAVEIAGHARLRGQDEDFAIVFAGIGLPHDSAEYFRRSLEQRGALGRTALFLNLASDS
                     STQRLLTPRFALSAAEYLAFEAGKHVLVILTDMTNYCEALREVSSSKGEIPSRKGFPG
                     YLYSDLATLFERAGCLRDKRGTLTQLSILTMPADDIGHPIPDLTGYITEGQIVLSRDL
                     DRRGVQPPVNVLPSLSRLMKDGIGARYTHADHPALASQLYAAYARAAQVRVLASVVGV
                     EGLVEADRRYLAFGTAFEETLVSQAQARTLEESMAIGWKLLADLPRSELTRLSDAQIA
                     AHLEKRP"
     gene            1818..>2291
                     /locus_tag="VFN38_13475"
     CDS             1818..>2291
                     /locus_tag="VFN38_13475"
                     /inference="COORDINATES: protein motif:HMM:NF013935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0046961 - proton-transporting ATPase
                     activity, rotational mechanism [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="V-type ATP synthase subunit D"
                     /protein_id="HET9012828.1"
                     /translation="MSDVNPTRSVVIEMKDERRAMHEGYVFLDEKCLLLVGEILAELG
                     RYAGFRHAFLAAHDAALDALRAAVLRHGLEGLQVYPRADLGPVRIGSRLRSLMGVRLQ
                     EAALEGTARPAPPAIDRSPEGEACRRAFATVVAAAVPLAAASGNLERLSLEYRRSV"
BASE COUNT          301 a          858 c          813 g          319 t
ORIGIN      
        1 cgccgtggtg ggcccgccag ggcaacgccc gctgggtcgc ctcgcgccgg cgcttccgca
       61 cgctgctcga cgaccaggct cggctcgagc gcatggcgcg catcatcggc aaggacgcgc
      121 tgccggccgc gcagcagctg acgctgctgt gcgccgagct cgtcggcgag gcgttcctgc
      181 gccagtcggc gttctcggag atcgatcgcg gctgcagccc ggcgcgccag gcggcgatga
      241 tgcgcgtgct ctgccgcttc atcgacctcg ccgaaggcgc gctcgccgcc ggcatcgagc
      301 ccgagcggat cgcggcgctc ggcggcatgc gctcgctgca gcgcatgggc gaggagatcg
      361 ccgaccacga gctcgcccgt ttcgacgagc tcgaggcgcg catcgaacgc gagttcgcgc
      421 aactcgcacc ggcccgggag gcgagcgatg cagctcacgg ttgaaggcgc ggcgacccgg
      481 ctcgagggcc cgctgctgtt cctgcgccgc acgctcgacg tcggcctgaa cgatgcggtc
      541 gacgtgcgcg gcgccgatgg ccggcgccgc ttcggccgcg tcgccgcgat cgacgagcag
      601 ttcctgacga tcgaggtgct cgagtcgacc gccggcatgg cgctcgagag cacggtcgtg
      661 cgcttccgcg gcgagccgct cgccttcgac ctcggcccgg gcctgctcgg ccgggtcttc
      721 aacggcgtcg gtcaggtcat cgacggcggc ccgccggtgg cgaccgagcg ccgcatgccg
      781 atcgacggcc tgccgatgaa tccggtcgcg cgggcgatgc cgcgcgactt catcgagacc
      841 ggcatcaccg cgctcgacct gctgaacagc ctggtgcgcg gccagaagct gccgctcttc
      901 tcgggcggcg ggctgccgca tgaccgtctc gcggtggaga tcgcgggcca tgcgcggctg
      961 cgcgggcagg acgaggactt cgcgatcgtc ttcgccggca tcggcctgcc gcacgacagc
     1021 gccgagtact tccggcgcag cctcgagcag cgcggtgcgc tcggccgcac cgcgctcttc
     1081 ctcaacctgg cgagcgactc gagcacgcag cgactgctga cgccgcgctt cgcgctgagc
     1141 gccgccgagt acctggcgtt cgaggccggc aagcacgtgc tggtgatcct caccgacatg
     1201 acgaactact gcgaggcgct gcgcgaggtg tcgtcgagca agggcgagat cccgagccgc
     1261 aagggtttcc cgggctacct ctattccgac ctcgcgaccc tgttcgagcg cgccgggtgc
     1321 ctgcgcgaca agcgcgggac cctgacgcag ctgtcgatcc tgacgatgcc cgccgacgac
     1381 atcggccatc cgatccccga cctcaccggc tacatcaccg agggccagat cgtgctgtcg
     1441 cgcgacctcg accggcgcgg cgtccagccg ccggtgaacg tgctgcccag cctgtcgcgg
     1501 ctgatgaagg acgggatcgg cgcccgctac acgcacgccg accatccggc gctcgccagc
     1561 cagctctacg ccgcctacgc gcgcgcggcg caggtgcgcg tcctcgccag cgtcgtcggc
     1621 gtcgagggcc tcgtcgaggc ggatcgccgg tacctcgcgt tcggcaccgc gttcgaggag
     1681 acgctcgtca gccaggcgca ggcgcgcacg ctcgaggaga gcatggcgat cggctggaag
     1741 ctcctcgccg acctgccgcg cagcgagctg acccgcctct ccgacgcgca gatcgcggcc
     1801 cacctcgaga agcggccatg agcgacgtca atccgacccg cagcgtcgtc atcgagatga
     1861 aggacgagcg gcgggcgatg cacgagggct acgtcttcct cgacgagaag tgcctgctcc
     1921 tggtcggcga gatcctcgcc gagctcggcc gatacgcggg cttccggcac gcgttcctcg
     1981 ccgcccacga cgccgcgctc gacgccttgc gcgcggcggt gctgcgccac gggctcgagg
     2041 ggctgcaggt ctatccgcga gccgacctcg gcccggtccg gatcggctcg cgcctgcgct
     2101 cgctgatggg cgtccgcctg caggaagcgg ccctcgaagg cacggcgcgg ccggcgccgc
     2161 cggcgatcga ccgctcgccc gagggcgagg cctgccgccg cgccttcgcc acggtcgtcg
     2221 ccgccgcggt tccgctcgcg gccgcgtcgg gcaacctcga gcggctctcg ctcgaatacc
     2281 ggcgttcggt g
//
LOCUS       DASSYW010000845         2699 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_339430, whole genome shotgun sequence.
ACCESSION   DASSYW010000845 DASSYW010000000
VERSION     DASSYW010000845.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2699)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2699)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2699
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_339430"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1259
                     /locus_tag="VFN38_13480"
     CDS             <1..1259
                     /locus_tag="VFN38_13480"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HET9012829.1"
                     /translation="MDALIVAMDSALAEIPGLDYEFSAPMRMRLDEVISGVRTDLGVK
                     IYGDSLELLQEKAEAIKSVVERVRGAEDVSVGVSAGAMQLEVDLDRPAIARYGLNVAD
                     VRQAVETGIGGTAATQVLDGRRRFDVVVRLDAPYRATPEAVGQTLIRTPSGGTVTLSQ
                     VARLRTVEAPEVIDHEGGQRYVVVQANVRGRDLGGFAADVQRAVAAQVQLPPGYYVTY
                     GGQFENQQRAMRRLGVIVPLVLLLIAGLLYATFGTVRLALLVMLNVPFALVGGVAALL
                     VRGLHLSLSASVGMIALAGIAVLNGVVLVSYIEQLRGEGRPLADAIREGAAVRLRPVL
                     MTAVVASLGFLPMAISRSAGAEVQRPLATVVIGGLVSATLLTLLVLPTAYSWMEGRAA
                     VDRVGAEQGVDGGPGVRRRLAGARGR"
     gene            complement(1297..2199)
                     /locus_tag="VFN38_13485"
     CDS             complement(1297..2199)
                     /locus_tag="VFN38_13485"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HET9012830.1"
                     /translation="METRRLRTDRLDIAYLAHGPADGPAALLLHGFPDDATAWTAVME
                     RLGARGHRCIAPYARGCGGERGTRFLRDDTPRAGDFPALGNDALALVDALDLRDLVVV
                     GQDWGSPVAEIVAMMRPDRVRQLVKLNWYGVYSMLELSRAQGFGWAQLRALWYVWMLN
                     LPLGEMVLQYDSVGFARALWAEWSPSWAAAERDAALDSALPSLVGDDWRRVALAAYRA
                     GTSPAETDPADDALRVRLQDPPPVSCATHILTGADDGVERTPLTPEQLARWFPAGAHS
                     EALRGVGHWPHRERPDAVIAAVLA"
BASE COUNT          350 a          943 c         1023 g          383 t
ORIGIN      
        1 cgatggacgc gttaatcgtc gccatggatt cggccctggc cgagattccg gggctggact
       61 acgagttcag cgcgccaatg cgcatgcggc tcgatgaggt catctccggc gtgcgaacag
      121 acctcggtgt gaagatctac ggcgacagcc tcgagctgct gcaggagaag gcggaggcga
      181 tcaagagcgt ggtcgagcgt gtccgcggcg ccgaggacgt atcggtcggc gtgagcgccg
      241 gcgcgatgca gctcgaggtc gacctcgacc gccccgccat cgcgcgctac ggcctgaacg
      301 tggccgacgt gcgccaggcg gtcgagacgg ggatcggcgg caccgccgcg acccaggtgc
      361 tcgacgggcg ccgccgattc gacgtggtgg tacgcctcga cgcaccctac cgcgcgacgc
      421 cggaggcggt cggtcagacg ctgatccgca cgccctcggg cgggaccgtc actctctcgc
      481 aggtcgcgcg gctccgcacg gtggaggcgc cggaggtgat cgaccacgag ggcggccaac
      541 ggtacgtggt cgtgcaggcc aacgtgcgcg ggcgcgatct gggcggcttc gcggccgacg
      601 tgcagcgcgc cgtggccgcg caggtgcaac tgcccccggg ctactacgtg acctacggcg
      661 gccagttcga gaaccagcag cgcgcgatgc ggcgcctcgg cgtcatcgtg ccgctggtgc
      721 tgctcctgat cgcggggctg ctctacgcga cgttcgggac cgtgcgactc gcgctgctcg
      781 tgatgctgaa cgtgcccttc gcgctcgtcg gcggcgtggc cgcgttgctc gtccgggggc
      841 tgcatctgag cctgagcgcg tcggtcggca tgatcgcgct cgccggcatc gccgtgctga
      901 acggcgtggt gctcgtgtcg tacatcgagc agcttcgcgg tgagggccgg ccgctcgccg
      961 acgcgatccg cgagggcgcg gccgtacgtc tgcggccggt cctcatgacg gcggtggtgg
     1021 cgagccttgg gttcctgccg atggccatct cgcggagcgc tggagcggag gtgcagcggc
     1081 cactcgccac ggtagtgatc ggcggtctcg tctcggcgac gctgctgacg ctgctggtac
     1141 ttcccacggc gtattcgtgg atggaggggc gggccgccgt cgaccgtgtg ggggcggagc
     1201 aaggagtgga cggtggccct ggcgttcggc gacgactcgc cggcgctcgc ggtcgctgac
     1261 gcgccaggcg cagcgcctcc ctcctgcgac cgccgctcat gccagcacgg ccgcgatgac
     1321 ggcgtcgggc cgctcccgat gcggccagtg cccgacgccg cgcagtgcct cggagtgcgc
     1381 tccggcgggg aaccagcggg ccagctgctc cggggtcagc ggcgtgcgct ccacgccgtc
     1441 gtcggcgccg gtgagaatgt gcgtcgcgca cgatacggga ggcggatcct ggagtcgcac
     1501 gcgcaatgca tcgtccgccg ggtcggtctc cgccgggctg gtccccgcgc ggtaggccgc
     1561 cagcgcgacg cgtcgccagt cgtccccgac gagcgacggc agcgcggagt cgagcgcggc
     1621 gtcgcgctcc gccgccgccc aggacggcga ccactcggcc cagagcgccc gcgcgaatcc
     1681 cacgctgtcg tactgcagga ccatctcgcc gagggggagg ttcagcatcc agacgtacca
     1741 gagtgcgcgc agctgggccc acccgaagcc ctgggcccgc gacagctcga gcatcgagta
     1801 gacgccgtac cagttcagct tcacgagctg gcgcacgcga tccgggcgca tcatcgccac
     1861 gatctccgcg accggtgagc cccagtcctg gcccacgacg acgaggtcgc gcaggtcgag
     1921 cgcgtcgacg agggccagcg cgtcgttgcc gagcgcgggg aagtcgcccg cgcgcggtgt
     1981 gtcgtctcgg aggaagcggg taccccgctc gccgccgcag ccgcgcgcgt acggcgcgat
     2041 gcagcggtgg ccccgcgcgc cgaggcgctc catcacggcg gtccaggcgg tggcgtcgtc
     2101 ggggaagccg tggaggagga gcgccgcggg cccatcggct ggcccgtgcg cgaggtaagc
     2161 gatgtccagg cggtcggtgc ggaggcggcg tgtctccatg ggcgcaagac tcgatctcga
     2221 gtgagcgtga gggcacgaac tccgattagc ggccgttcaa cgcgcgaacg ttggagttcg
     2281 tgcccgcgcc ggcgccgcgc ccagccggct ccgcgcccgc gcggcgagct cgcgcaccag
     2341 cccaggcgtg cgtcatccag tggacccggg cacgcaccgt gcaccatctg ccggcgcgcc
     2401 ggtgagctgc cggcgctggg agtggagttc cccatggacc gcgggccgcc ggcgcgcggc
     2461 cggccaatga ctcctgccag ggctacccgg cccggcgggg gtttttcgtg tacgagagcc
     2521 tcggagagac catgagtcgc agtgcagggt tgtcgcttcc ccacgccgag gccgcccatg
     2581 gcttctgagc gccgccgccc gcgtgacctc gccgcgcact cggcggcgct ggtcgccctc
     2641 tcggtcgcgg ccctcgcggc ctgcgcgaaa gtgggcgagg acgtgttcga tcacgagtc
//
LOCUS       DASSYW010000846         2565 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1632889, whole genome shotgun sequence.
ACCESSION   DASSYW010000846 DASSYW010000000
VERSION     DASSYW010000846.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2565)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2565)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2565
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1632889"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            161..745
                     /locus_tag="VFN38_13490"
     CDS             161..745
                     /locus_tag="VFN38_13490"
                     /inference="COORDINATES: protein motif:HMM:NF027567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HET9012831.1"
                     /translation="MADKTTNPDRDAAAPTAKKLDDLYKLIDGIEIAMFTTRRPDGHL
                     VSRPMATQERVTGTDLWFVTDVSSNKLDELATDPHVNLAYYNVKSREWVSVAGTATVT
                     QDRNLIRELYKPDWKAWFGDLGGEKDGGPSDPRLALVLVEAHSVEYMVTTKPRPIVLF
                     EVAKALVTGSTPNVGEQRHLGERELRSEAAREAR"
     gene            910..1497
                     /locus_tag="VFN38_13495"
     CDS             910..1497
                     /locus_tag="VFN38_13495"
                     /inference="COORDINATES: protein motif:HMM:NF012998.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004664 - prephenate dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0009094 - L-phenylalanine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase domain-containing
                     protein"
                     /protein_id="HET9012832.1"
                     /translation="MTTIVAFQGESGAFSEAAAEGLVPSPRALLPCATFDDVARAVVN
                     GHADYGVLPVENLVAGPVLESLDALDRYASLERVRELTLPVHLALLGLPGATVQDVRH
                     VLSHPVALKQCTKWLWAHRLGTVAEAHDTAGAARMVAIRRDRSVAAIAATWAAAHYGL
                     VVLAEGLEDRPDNATRFVLVRRRPARLDALTAPDP"
     gene            1553..>2565
                     /gene="gcvT"
                     /locus_tag="VFN38_13500"
     CDS             1553..>2565
                     /gene="gcvT"
                     /locus_tag="VFN38_13500"
                     /EC_number="2.1.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004047 - aminomethyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system aminomethyltransferase
                     GcvT"
                     /protein_id="HET9012833.1"
                     /translation="MSHASNTATALKRTPLHDVHAALGAKIVPFAGYEMPVQYPAGIT
                     AEHKAVREGVGMFDVSHMGEFWVTGPRAVDFVNHVTTNNVAALAVGQVHYTTILNERG
                     TIEDDALVYRFADRVMMVVNASNAEKDFAHIAKHAATFGVTLRDASEEMALLAIQGPR
                     AARVLQTLTKTDLSTIGYYHFTEGKVADRPAIISRTGYTGEDGFELYVTNEHAVPIWE
                     AVMATGKVTPAGLGARDSLRLEMGMALYGNDIDDTVTPLEANLGWLVKLAKGDFVGRD
                     VLAAQKEKGVEKKLVGFTTSERAFPRHGYPVFYENQPSGIVCSGTMSPTLEIPIGTCY
                     LPLA"
BASE COUNT          406 a          943 c          867 g          349 t
ORIGIN      
        1 ggacctgctt gtcgattgtc gtcctgagcc gaaggcgaag gacctgcttg tcgattgtcg
       61 tcctgagccg aaggcgaagg acctgcttgt cgacccgcta ggcacgctcc ctgcctttcc
      121 gtccggaaca caagcgagtc cacccgacgg agatccatcc atggccgaca agacgacgaa
      181 tcccgaccgc gacgccgcgg cgcccaccgc gaagaagctc gacgatctct acaagctgat
      241 cgacgggatc gagatcgcga tgttcaccac gcgccgcccc gacgggcatc tcgtctcgcg
      301 cccgatggcc acccaggagc gcgtcaccgg caccgacctc tggttcgtca ccgacgtgtc
      361 gtccaacaag ctcgacgagc tggcgaccga cccgcacgtg aacctcgcct actacaacgt
      421 gaagtcgcgc gagtgggtct ccgtcgccgg caccgccacc gtcacccagg accgcaacct
      481 gatccgggag ctgtacaagc ccgactggaa ggcctggttc ggcgaccttg ggggcgagaa
      541 ggacggcggg ccctccgacc cgcggctcgc gctggtgctc gtggaggcgc actcggtgga
      601 gtacatggtc accaccaagc cgcgccccat cgtcctgttc gaggtcgcga aggcgctcgt
      661 caccggctcc acgccgaacg tgggcgagca gcgccacctc ggcgagcgcg agctgcgcag
      721 cgaggccgcg cgcgaggcgc gctgacggcg cgctgacggc gggaccggcg ttgcgcagct
      781 acgcgatcgc ggtccctccg ggggctcgct ctcctcgccc ctgcgggacc gcgatcgctt
      841 cgcccatggc ttccgctccc ggagcgcgca tcggtgagcg aagatggaaa cgcgttctga
      901 cgccgtgaga tgaccaccat cgtcgcgttc cagggggaga gcggcgcgtt cagcgaggcg
      961 gcggcggagg ggctcgtgcc ctcgccgcgc gcactcctcc cctgcgccac cttcgacgac
     1021 gtcgcccgcg ccgtggtgaa cggccacgcc gactacgggg tgctcccggt ggagaacctc
     1081 gtcgccggcc ccgtgctcga gtcgctcgac gcgctggacc gctacgcctc gctggagcgg
     1141 gtgcgcgagc tcaccctgcc ggtgcacctc gcgctcctcg gcctccccgg cgccacggtg
     1201 caggacgtcc gccacgtgct cagccacccc gtggcgctca agcagtgcac caagtggctg
     1261 tgggcgcacc ggctgggcac ggtggccgag gcgcacgaca ccgccggcgc ggcgcgcatg
     1321 gtggccatcc gccgcgaccg ctcggtggcc gccatcgccg ccacctgggc ggcggcgcac
     1381 tacgggctgg tggtgctggc cgaggggctg gaggaccgtc ccgacaacgc cacgcgcttc
     1441 gtgctggtgc ggcggcggcc ggcgcggctc gacgcgctca ccgcccccga tccgtgagcg
     1501 ccgcccgcgc atatatttcc ctcgcccgcc cacccgccct cgagcagcca tcatgtccca
     1561 cgcgtcgaac accgccaccg ccctcaagcg caccccgctc cacgacgtcc acgccgcgct
     1621 cggcgccaag atcgtcccct tcgccggcta cgagatgccc gtgcagtacc cggccggcat
     1681 caccgccgag cacaaggcgg tgcgcgaagg ggtggggatg ttcgacgtgt cgcacatggg
     1741 cgagttctgg gtcaccggcc cccgcgccgt ggacttcgtg aaccacgtga ccaccaacaa
     1801 cgtggccgcg ctggcggtgg ggcaggtgca ctacaccacc atcctcaacg agcgcggcac
     1861 catcgaggac gacgccctgg tgtaccgctt cgccgaccgc gtgatgatgg tggtgaacgc
     1921 gagcaacgcc gagaaggact tcgcccacat cgcgaagcac gcggcgacgt tcggcgtcac
     1981 gctgcgcgac gccagcgagg agatggcgct gctcgccatc caggggccca gggcggcgcg
     2041 cgtgctccag acgctgacga agaccgacct ctccaccatc ggctactacc acttcaccga
     2101 gggcaaggtg gccgaccggc cggccatcat cagccgcacc ggctacaccg gcgaggacgg
     2161 cttcgagctg tacgtgacga acgagcacgc cgtccccatc tgggaggcgg tgatggccac
     2221 gggcaaggtg accccggcgg ggctgggcgc gcgcgactcg ctgcgcctgg agatggggat
     2281 ggcgctctac ggcaatgaca tcgacgacac ggtgaccccg ctggaggcca acctcggctg
     2341 gctggtgaag ctggccaagg gggacttcgt ggggcgcgac gtgctggcgg cgcagaagga
     2401 gaagggggtg gagaagaagc tcgtcggctt caccacgagc gagcgcgcct tcccgcggca
     2461 cggctatccg gtgttctacg agaaccagcc gagtgggatc gtctgcagcg gcaccatgag
     2521 cccgaccctc gagatcccga tcggcacctg ctacctcccg ctcgc
//
LOCUS       DASSYW010000847         2043 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_947709, whole genome shotgun sequence.
ACCESSION   DASSYW010000847 DASSYW010000000
VERSION     DASSYW010000847.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2043)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2043)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2043
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_947709"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1587
                     /locus_tag="VFN38_13505"
     CDS             <1..1587
                     /locus_tag="VFN38_13505"
                     /inference="COORDINATES: protein motif:HMM:NF013100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /protein_id="HET9012834.1"
                     /translation="NVIYLGNGVYGVEGASRDLFGKSVEDVTLAEAAMLAALPKAPSV
                     YTPRRDARRARARRDLVLALMVREGYIDSVRARAATRQPLRIAKAEWERFASNEPSAL
                     TAVRAAVDSIVRKVGIEEDGDLIISTTLDATAQRAGDRAVRRRAAVIQQEARDWGRNG
                     GTIEGAMVAIDPRNGDIRALVGGRQYERGGFNRAVAAHRQPGSAFKPFVYAAALGTGM
                     TPATMVDDEPVEVQQGRQVWSPSNFDDEYLGRVTLRRALERSANAATVRVSRAVGESR
                     VAAVAHANGIASSLPTVPALALGAAEVTPFELVAAYAPFANGGYRVRPRLVQRIENAD
                     GTPLWTNPAAPAVQVMDPRDAYQLTSMLRAVVDHGTGHTLRDLGVKGRVAGKTGTTNN
                     GADVWFVGYTPSLVAGFWFGYDTPRTIGPDASGGRLAAPAWADFYLTGWREPAASASA
                     WLPPAGMEARTIDAVTGELATEWCPTQQTEYFKPGTAPTEPCREHEGPPEMMDENHDR
                     GWMNDITDRVSDALKKVFKF"
     gene            1721..1954
                     /locus_tag="VFN38_13510"
     CDS             1721..1954
                     /locus_tag="VFN38_13510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012835.1"
                     /translation="MGERNQDLDGVGLPVDSRNGRDSVEVSGAREAGENVPREARSEE
                     GVPPTSQGDGSGDDQAREGNRHKGNPAVGDIGA"
BASE COUNT          313 a          705 c          769 g          256 t
ORIGIN      
        1 aacgtcatct acctcggcaa cggcgtctac ggagtcgagg gggcgagccg cgatctgttc
       61 ggcaagagtg tcgaggatgt cacgctcgcc gaggcggcga tgctcgccgc gctgccgaag
      121 gccccgtcgg tgtacacgcc gcggcgagat gcgcggcgcg cgcgcgcgcg gcgggatctc
      181 gtgctcgccc tgatggtgcg cgagggctac atcgactcgg tgcgggcgcg cgcggcgacg
      241 cgccagccgt tgcgcatcgc gaaggccgag tgggagcgct tcgcgtcgaa cgagccgtcg
      301 gcgctcaccg cggtgcgcgc ggcggtcgat tcgatcgttc gaaaggtcgg gatcgaggag
      361 gacggcgatc tgatcatctc gacgacgctc gacgcgaccg cgcagcgcgc cggggatcgt
      421 gccgtgcgtc gtcgcgccgc ggtgatccag caggaagcgc gtgactgggg acgcaacggc
      481 ggcacgatcg agggcgcgat ggtcgcgatc gatccgcgca acggcgacat tcgcgcgctc
      541 gtgggtggac gtcagtacga gcgcggcgga ttcaatcgcg cggtcgcggc gcaccgccag
      601 ccgggctcgg cgttcaagcc gttcgtctac gccgccgcgc tcggcaccgg aatgacgccg
      661 gcgacgatgg tggacgacga gccggtcgag gtgcagcagg ggcgacaggt ctggtcgccg
      721 tcgaacttcg acgacgagta cctcgggcgg gtgacgctgc gccgcgccct cgagcgatcg
      781 gccaacgcgg ccaccgtgcg ggtcagccgc gccgtgggcg agtcgcgcgt cgcggccgtc
      841 gcccacgcca acggcatcgc gagctcgctc ccgacggtgc ccgcgctcgc cctcggcgcc
      901 gccgaggtga cgccgttcga gctcgtcgcc gcgtacgccc cgttcgccaa cggcggctac
      961 cgcgtgcgtc cgcgcctcgt gcagcggatc gagaacgctg acggcactcc gctctggacg
     1021 aacccggccg cgccggccgt gcaggtcatg gatccgcgcg acgcctacca gctcacctcg
     1081 atgctgcgcg ccgtcgtgga ccacggcacc ggacacaccc tgcgcgacct cggcgtgaag
     1141 gggcgcgtcg ccggcaagac ggggacgacc aacaacggcg ccgacgtctg gttcgtgggc
     1201 tacacgccgt cgctcgtcgc cggcttctgg ttcggctacg acacgccgcg gacgatcggc
     1261 cccgacgcga gcggcgggcg gctcgccgcg ccggcgtggg ccgatttcta cctcacgggc
     1321 tggcgcgagc cggcggcgtc ggccagcgcc tggttgcccc ccgcgggcat ggaggcgcgc
     1381 acgatcgacg cggtgaccgg cgagctggcc accgaatggt gtccgacgca gcagaccgag
     1441 tacttcaagc ccggcaccgc gcccaccgag ccctgtcgcg agcacgaggg gccgcccgag
     1501 atgatggacg agaaccacga ccgcggctgg atgaacgaca tcaccgaccg cgtgtcggac
     1561 gcgttgaaga aagtgttcaa gttctgaggc gaggggggcg gggcgccgtt cgagggcgca
     1621 atccgcaccg cacggttcgt ggccgcgatc ggtcgcccga cccgccggct cgccccttgc
     1681 ctccttccag ctccgagacc ttctacgagg agagcgacca atgggagagc ggaaccagga
     1741 cctcgacggc gtcggcctgc cggtggacag ccggaacggc cgggacagcg tcgaagtgag
     1801 cggagcgcgc gaggcggggg agaacgtccc gcgcgaggcg cgcagcgagg aaggggtccc
     1861 cccgacctcg cagggtgacg ggagcgggga cgaccaggcg cgcgaaggca accggcacaa
     1921 gggcaacccc gcggtgggcg acatcggcgc ctgaaggcgg aagggcgaca gaagaaagag
     1981 ggagggcaca ccggtggagc tcgactggtg tgccctccct ctttcccctt tcgcctttca
     2041 cag
//
LOCUS       DASSYW010000848         3177 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_711515, whole genome shotgun sequence.
ACCESSION   DASSYW010000848 DASSYW010000000
VERSION     DASSYW010000848.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3177)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3177)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3177
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_711515"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1118
                     /locus_tag="VFN38_13515"
     CDS             <1..1118
                     /locus_tag="VFN38_13515"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="class I adenylate-forming enzyme family protein"
                     /protein_id="HET9012836.1"
                     /translation="GERGRSGGGAMNMGTLVPRHARYRGDHLALVCGRTRLTWRELGA
                     RVNRLANALHGLGLRKGDKLAVVMPNCLEVLEIYWASVQMGLVLVPLSPLLRGPALAT
                     LLCDSHTAAVITSHELAGELDAIRAEVPGVRADRWIALGDATPGYLSYEALTASASAE
                     PPPAVEIDGDHEFNIVYSSGTTGSPKGIVHTHDIRAMYCTLFSSIFRFTPESVVMHAG
                     SLVFNGAFVTLMPALFLGTTYVLLSRFDAVEFIETVAREQVTHVMMVPSQIVAVMNAP
                     NFSPARLASLQMLGSVGAPLHREHKDRLTSALPNVFYELYGLTEGAITILDKFVVGRK
                     AGSVGASTPFFEMRIMGEDGRDLPAGEVGRSWVAVRC"
     gene            1097..1567
                     /locus_tag="VFN38_13520"
     CDS             1097..1567
                     /locus_tag="VFN38_13520"
                     /inference="COORDINATES: protein motif:HMM:NF024591.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012837.1"
                     /translation="MGRSPLLMPGYYERPDLTAQAIVDGWMHTGDMGYMDEDGYLYLV
                     DRKKDLIISGGVNVYPKDIEEVVVTHPAVLETAVFGVPDEKWGEAPLAAVVLKQGAQV
                     TAAELRTWVNERVAARYQQVRDVAIMQEFPRNAAGKTLKRVMRDEYWQGRTVRI"
     gene            1568..2395
                     /locus_tag="VFN38_13525"
     CDS             1568..2395
                     /locus_tag="VFN38_13525"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HET9012838.1"
                     /translation="MGKLDGKVAIVSGSGRGIGRAVALKLASDGARVVVNDLEEATAR
                     DTADAIGAAGGEAAVCAGSVTDPGFAERFVSAALDGFGGLDIIVNNAGYTWDSVIQKM
                     TDEQFDAMMDVHVKAPFRILRAAAEPIRAMAKEEAAGGREVFRKVVNIASVAGINGNA
                     GQVNYSSAKAALVGMTKTLCKEWGRYKVNVNCVAFGFIKTRLTQPLTEAGATIDVEGR
                     TIAVGVQPALIEAAGSFIPLGRAGTPEEAANGVYLFCTPESDYISGQVIIVGGGATF"
     gene            complement(2396..>3177)
                     /locus_tag="VFN38_13530"
     CDS             complement(2396..>3177)
                     /locus_tag="VFN38_13530"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HET9012839.1"
                     /translation="LAGGLIALTGNARLAFGVAAFFTLLFIAILFTLPVLPARASDAP
                     HSAKEIFAGLHFIRRTPIFLAAITLDLLAVLVGGAVALLPVYAKDILLVGPSGLGWLR
                     TAPAVGSLLMSLAATRMKPWQRPGRLLLMVVVGFGLATIGFGLSRNFAFSLFCLSLVG
                     ATDTVSVIIRMTLEQTITPDALRGRVSSINFLFVGFSNELGSFESGAAAALFGPVVAV
                     AGGGIASILIVGLVAMLWPQLARIGPLHTLSPERPMGETAT"
BASE COUNT          551 a          985 c         1158 g          483 t
ORIGIN      
        1 gcggggagcg ggggcggagc gggggtggcg cgatgaacat ggggacgctg gtgccgcggc
       61 atgcgcggta tcgcggcgac cacctggcgc tggtgtgcgg acgcacgcgc ctcacctggc
      121 gcgagctcgg cgcgcgcgtc aatcgactcg ccaacgccct gcacgggctc ggcctgcgca
      181 agggcgacaa gctggccgtg gtgatgccga actgtctcga agtgctggag atctattggg
      241 cgtcggtgca gatggggctc gtgctcgttc cgctcagccc tctcctgcgc gggccggcgc
      301 tggcgacgct gctgtgcgat tcccacaccg ccgccgtcat cacttcgcac gagctggcgg
      361 gagagctcga cgcgatccgg gccgaggtgc ccggagtgcg cgcggatcgc tggatcgcgc
      421 tcggggacgc gacgccaggg tatctgtcgt acgaggcact caccgcctcg gcgtcggccg
      481 agccgccgcc ggcggtggag atcgacgggg atcacgagtt caacatcgtg tacagcagcg
      541 gcaccacggg ctcgcccaag gggatcgtgc acacgcacga catccgggcg atgtactgca
      601 cgctcttctc gtccatcttc cggttcacgc cggagagtgt ggtgatgcac gccggctcgc
      661 tggtgttcaa cggcgcgttc gtcacgctga tgccggcgct ctttctcggc accacgtacg
      721 tactgctctc gcggttcgat gcggtggagt tcatcgagac cgtggcacgc gagcaggtga
      781 cgcacgtgat gatggtgccg tcgcagatcg tggccgtgat gaacgccccc aacttctccc
      841 cggccaggct ggcctccctg cagatgctcg gttccgtagg ggcgccgctc caccgcgagc
      901 acaaggatcg gctcacctcc gctctgccga acgtgttcta cgagctgtac ggcctgaccg
      961 agggcgccat caccatcctc gacaagttcg tcgtggggcg gaaggcgggg tcggtggggg
     1021 cgagcacgcc gttcttcgag atgcggatca tgggcgagga cgggcgcgac ctgccggcgg
     1081 gcgaagtcgg gagatcgtgg gtcgcagtcc gctgctgatg cccggctact acgaacgccc
     1141 cgacctcacg gcgcaggcga tcgtggatgg ctggatgcac accggcgaca tggggtacat
     1201 ggacgaggac ggctatctgt atctcgtcga tcgcaagaag gacctcatca tctccggcgg
     1261 cgtgaacgtg tacccgaagg acatcgagga ggtcgtcgtc actcatcccg ccgtgctgga
     1321 gacggcggtg ttcggcgtgc ccgacgagaa gtggggggag gcgccgctcg ccgccgtggt
     1381 gctcaagcag ggcgcccagg tgacggcggc cgagctccgc acgtgggtga acgagcgggt
     1441 ggcggcgaga tatcagcagg tacgggacgt cgcgatcatg caggagtttc cgcgcaacgc
     1501 ggcgggcaag acgctcaagc gcgtcatgcg cgacgaatac tggcagggac gcacggtgag
     1561 aatctgaatg ggaaagctgg acgggaaggt ggcgatcgtg tcgggctcgg ggcgagggat
     1621 cggccgagcc gtggcgctca agctcgcgtc ggacggggcg cgcgtcgtgg tcaacgacct
     1681 cgaggaggcg acggcgcgtg acacggcgga cgcgatcggg gcggcgggcg gcgaggccgc
     1741 ggtgtgcgcg ggcagcgtga cggatcccgg cttcgccgag cggttcgtgt cggcggcgct
     1801 cgatggcttc gggggtctgg acatcatcgt gaacaacgcc ggctacacct gggacagcgt
     1861 catccagaag atgaccgacg aacagttcga cgcgatgatg gacgtccacg tgaaagcgcc
     1921 gttccgtatt ctccgcgccg cggctgagcc gatccgcgcg atggccaagg aagaggcggc
     1981 cggggggcgg gaagtattcc gcaaggtcgt caacatcgcg tcggtcgccg ggatcaacgg
     2041 caacgccggc caggtcaact actcctcggc caaggcggca ctggtcggga tgaccaagac
     2101 gctctgcaag gaatgggggc gctacaaggt gaatgtgaac tgcgtggcgt tcgggttcat
     2161 caagacccgc ctgacccagc cgctcactga agcgggggcg acgatcgacg tcgagggccg
     2221 gaccatcgca gtcggagtcc agccggcgct gatcgaagcc gccgggtcgt tcattccgct
     2281 gggtcgggcc ggtacgccgg aagaggcggc caacggcgtg tacctcttct gcactcctga
     2341 atcggactac atctccggcc aggtcatcat tgtcggcggt ggagcgacgt tctgatcagg
     2401 ttgcggtttc gcccatgggt cgctccggcg acagggtgtg caggggtcct attcgggcga
     2461 gctgtggcca gagcatcgca acgagtccga cgatgaggat cgaggcgatc ccgcccccgg
     2521 ctaccgccac gacgggtccg aacaacgccg ccgccgcgcc gctctcgaag ctccccagtt
     2581 cattgctgaa tccaacaaaa aggaagttga tcgagctgac ccgtccgcga agcgcgtcag
     2641 gggtgatcgt ctgttcgagg gtcatccgga tgatgacact caccgtatcg gtcgccccga
     2701 ccagggaaag gcagaagagc gagaacgcga agttcctgga gagcccgaac ccgatggtcg
     2761 cgaggccgaa tccgaccacg accatgagca gcaggcgacc gggccgctgc cacggcttca
     2821 tccgtgtcgc cgcgagcgac atgaggagcg atcccaccgc cggcgcggtg cggagccagc
     2881 cgagcccgga gggtcccacc agcaggatgt ccttggcgta caccggcagc agcgccaccg
     2941 cgccgcccac cagcaccgca agcaggtcga gtgtgattgc cgcaagaaag atcggtgtcc
     3001 gccggatgaa gtggaggccg gcgaagatct ccttggcgct gtgcggtgca tccgaggcgc
     3061 gggccggcag caccggcagg gtgaacagga tcgcgatgaa gagcagtgtg aagaaggcgg
     3121 ccacgccgaa cgcgagtcgg gcattgcccg taagcgcgat cagcccaccg gcgagcg
//
LOCUS       DASSYW010000849         3405 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_320981, whole genome shotgun sequence.
ACCESSION   DASSYW010000849 DASSYW010000000
VERSION     DASSYW010000849.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3405)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3405)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3405
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_320981"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            177..>3405
                     /locus_tag="VFN38_13535"
     CDS             177..>3405
                     /locus_tag="VFN38_13535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HET9012840.1"
                     /translation="MLRRHTLPLALVALTAAPAAAQTRLLRTPTVSAHDIAFAYANNI
                     WVVERAGGAARRLTSFQGETQNPKLSPDGRTVAFSADYGGNTDVYVVPVEGGQPRRLT
                     WHPGADVVQGWMPDGKSVVFSSGRASNAPSAAPRFWTVPLDGGPEQAMPMPRAYQGKV
                     SPDGRRVAYRMNNSWDEERRNYRGGQNRPIWVLDLATMEVTSPEWTDSKDVDPVWVGD
                     AVWFISDRDGVANVWAWDTRTKQLRQVTRFTDFDVKALDAGGGAVVFEQAGYVHALDP
                     ATGKEQVVNITATGDFPWMMAQWKEVSNRMTNLALSPTGKRAAVEARGEIFTIPAEKG
                     DVRNITHASGSAEIWPVWSPDGRSVAYFSDRTGEYALYIAPQDGLGTTREIALPEPSH
                     PYTPAWSPDGKRIAFHDTHFRLWLVDVASGKAAVADTDKYFKGERSIVPVWSPDSRWV
                     AYPKRLPSYFRAIFAYDVQTGQTRQMTDGLADAVSPAWDASGKYLWFLASTNYGLNSG
                     LLDMSSYDRPTTRGLYLMVLAKSDSSPLLPESDEEAARAGRAPREPGRETPDSAARGT
                     RGAGRDSASETRASDSTKSAPLAPRPASRPVRIDFDRLQQRVIAVQDVALREYEQLRA
                     GAAGTVFFLEDVPTTGTAESAPDAGNGGTLHRFQLSTRKAAPFAQNVAQYVVSADGKK
                     LLYRTPGQQGALFLVDADKPAAPNAGQGKLAVALRAYVDPKAEFGQIFAEGWRNQRNN
                     LYVRNMHGTDWPRMKEMYGQLLPYVNHRADLNYLLDNMGAEIAIGHSYVRGGDMPEVP
                     RSTGGLLGADFAVENGRYRITRIYDAESWNPELRAPLAMAGVDVSRGDYVLAVNGVEL
                     RAPDNLYRLLDGTANRQTVLTVNARPTMDGARQVTVLPIANEQGLRTRAWVEQNRRTV
                     DSLSRGRLAYVYLPNTGGPGYASFNRYYFAQQDRQGVVVDERWNGGGSAADYIVDLLG
                     RDYDGYFNNPVGDRYPYTSPANGIWGPKVMIVNEMAGSGGDLMPYMFKRRKLGPLVGK
                     RTWGGLVATTDTPPFVDGGTMIAPRFGFFDREGKFAVENEGVTPDI"
BASE COUNT          540 a         1277 c         1144 g          444 t
ORIGIN      
        1 gtcagaagga atccgtggaa atccgcgctc ccgcttttcc taccaagcgc ccgcggaagt
       61 ccgcgttccc gcttctcgcc gagcgccgag ccccgagagc actagccgca ccggccccgg
      121 ggagtgaacg ttccccctgt cccggacgcg cacgccgacc cctgccctcg gttccgatgc
      181 ttcgtcgtca cacgttgccg ctcgcgctcg tcgcgctcac cgccgcgccc gccgccgcgc
      241 agacgcgcct cctccgcacg ccgacggtga gcgcgcacga catcgccttc gcctacgcga
      301 acaacatctg ggtcgtcgag cgtgccggcg gcgccgcgcg gcggctgacg agcttccagg
      361 gggagaccca gaaccccaag ctctcccccg acgggcgcac ggtcgccttc agcgccgact
      421 acggcggcaa caccgacgtc tacgtcgtcc ccgtcgaggg gggacagccg cggcgtctca
      481 cctggcatcc cggcgccgac gtcgtgcagg gctggatgcc cgacgggaag agcgtcgtct
      541 tctcctccgg gcgggcgagc aacgcgccga gcgccgcgcc gcgcttctgg accgtgccgc
      601 tcgacggcgg gccggagcag gcgatgccga tgccgcgcgc ctatcagggg aaggtgtcgc
      661 ccgacggccg gcgcgtcgcc tatcgcatga acaactcgtg ggacgaggag cgccgcaact
      721 atcgcggcgg gcagaaccgc ccgatctggg tgctcgacct cgcgacgatg gaggtgacga
      781 gccccgagtg gaccgactcc aaggacgtcg atcccgtctg ggtgggggac gccgtctggt
      841 tcatctccga ccgcgacggc gtggccaacg tctgggcgtg ggacacgcgc acgaagcagc
      901 tccgccaggt cacgcgcttc accgacttcg acgtcaaggc gctcgatgcg ggcggcggcg
      961 ctgtcgtctt cgagcaggcg ggctacgtcc acgcgctcga cccggcgacg ggcaaggagc
     1021 aggtcgtgaa catcaccgcg accggcgact tcccgtggat gatggcgcag tggaaggagg
     1081 tctcgaaccg gatgaccaac ctcgccctct cccccaccgg caagcgcgcg gcggtcgagg
     1141 cgcgcggcga gatcttcacc atccccgccg agaaggggga cgtccgcaac atcacccacg
     1201 ccagcggctc ggcggagatc tggccggtgt ggagccccga cggcaggtcg gtcgcctact
     1261 tcagcgaccg cacgggggag tacgcgctct acatcgcgcc gcaggacggg ctggggacga
     1321 cgcgcgagat cgcgctcccc gagccgagcc acccctacac gccggcctgg tcgcccgacg
     1381 gcaagcggat cgccttccac gacacccact tccgtctctg gctggtggac gtcgcgagcg
     1441 gcaaggccgc cgtcgccgac accgacaagt acttcaaggg cgagcgctcg atcgtgcccg
     1501 tctggagccc cgactcgcgc tgggtcgcct acccgaagcg ccttccgtcg tacttccgcg
     1561 ccatcttcgc ctacgacgtg cagaccggcc agacgcggca gatgaccgac ggtctcgccg
     1621 acgccgtctc gccggcctgg gacgcgagcg gcaagtacct ctggttcctc gcctcgacga
     1681 actacgggct caactccggc ctgctcgaca tgtcgtccta cgaccgcccg acgacgcgcg
     1741 ggctctatct gatggtgctc gcgaagagcg actcctcgcc gctgctcccg gagagcgatg
     1801 aggaagcggc gcgcgcggga cgggcgccgc gggagccggg ccgggagaca ccggacagcg
     1861 cggcgcgcgg gacgcggggc gcggggcgcg acagcgcatc cgagacccgc gcgagcgact
     1921 cgacgaagtc cgcacccctc gccccgcgtc ccgcgtcccg ccccgttcgc atcgacttcg
     1981 acaggctcca gcagcgcgtg atcgccgtgc aggacgtcgc gctgcgcgag tacgagcagc
     2041 tccgcgcggg cgcggccggc acggtcttct tcctcgagga cgtgcccacc accgggaccg
     2101 ccgagtcggc gcccgatgcc ggaaacgggg gaaccctcca ccgcttccag ctctccaccc
     2161 gcaaggccgc gccgttcgcc cagaacgtcg cccagtacgt cgtcagcgcc gacgggaaga
     2221 agctcctcta ccgcacgccg ggacagcagg gcgccctctt cctcgtcgac gccgacaagc
     2281 cggcggcgcc taacgcggga caggggaagc tggccgtcgc cctccgcgcc tacgtcgacc
     2341 cgaaggccga gttcgggcag atcttcgccg aggggtggcg caaccagcgc aacaatctgt
     2401 acgtgcgcaa catgcacggc accgactggc cgcggatgaa ggagatgtac ggccagctcc
     2461 tcccctacgt gaaccaccgc gccgatctca actacctgct cgacaacatg ggcgccgaga
     2521 tcgcgatcgg gcactcgtac gtccgcggcg gcgacatgcc cgaggtcccg cgctcgaccg
     2581 gcggcctgct cggcgccgac ttcgcggtcg agaacggccg ctaccgcatc acgcgcatct
     2641 acgacgccga gagctggaac cccgagctcc gcgcgccgct ggcgatggcc ggcgtcgacg
     2701 tctcgcgcgg cgactacgtg ctcgccgtca acggcgtcga gctgagggcg ccggacaacc
     2761 tctaccgcct gctcgacggc acggccaacc ggcagacggt gctcaccgtc aacgcgcggc
     2821 cgaccatgga cggcgcgcgc caggtgaccg tcctgccgat cgccaacgag caggggctcc
     2881 gcacccgtgc ctgggtcgag cagaatcgcc gcacggtgga ctcgctctcc cgcggccgcc
     2941 tcgcctacgt ctacctgccc aacaccggcg ggccgggcta cgccagcttc aaccgctact
     3001 acttcgcgca gcaggacagg cagggggtgg tggtggacga gcgctggaac ggcggcggct
     3061 cggccgccga ctacatcgtc gacctgctcg gccgcgacta cgacggctac ttcaacaatc
     3121 ccgtcggcga ccgctacccg tacaccagcc cggcgaacgg catctggggc ccgaaggtca
     3181 tgatcgtcaa cgagatggcg ggctcgggag gcgacctgat gccgtacatg ttcaagcgcc
     3241 gcaagctcgg gccgctggtc ggcaagcgga cctggggagg actcgtcgcc accaccgaca
     3301 cgcccccctt cgtggacggc gggacgatga tcgcgccgcg cttcggcttc ttcgatcgcg
     3361 aggggaagtt cgcggtcgag aacgaggggg tgacgcccga catcg
//
LOCUS       DASSYW010000850         2172 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1334471, whole genome shotgun sequence.
ACCESSION   DASSYW010000850 DASSYW010000000
VERSION     DASSYW010000850.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2172)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2172)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2172
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1334471"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            167..604
                     /locus_tag="VFN38_13540"
     CDS             167..604
                     /locus_tag="VFN38_13540"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF024675.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HET9012841.1"
                     /translation="MTDVLPEVVFHIYPADCDMLGHVNHATMLAFLERARWELLERQD
                     VGGVHDFASVPVWSVVRHVDIDYYAQSLPGDDLAIRSGLLAVKNTSYIVKQDVKKVRD
                     GVLVAQASIVFVCIDRSGKPVRVPEEWRTLLPHWPEDGESRSR"
     gene            601..1398
                     /locus_tag="VFN38_13545"
     CDS             601..1398
                     /locus_tag="VFN38_13545"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HET9012842.1"
                     /translation="MIAHLPDGLEVAYDDVGRGTPVLFIHGWPHNRSLWAGQVSGLST
                     LARCIAPDLRGFGGTSVREPYSIDRYADDLVALLDARAVDRAVVCGLSMGGYVALAML
                     RRHRVRVRALILTSTRATADTPEAREKRMRLVDFVRSHGMEALAARQLKAMVGHTTLD
                     RRPEVRESLRRMMAAAPSEGVIGALHAMAERADSSAVLPTIDVPTLVVGGAEDGFTPP
                     SELRTMAADIPDSRCELLEASGHACAYERPGAFNHVVSEFLGRLRSD"
     gene            1477..2130
                     /locus_tag="VFN38_13550"
     CDS             1477..2130
                     /locus_tag="VFN38_13550"
                     /EC_number="2.1.1.100"
                     /EC_number="2.1.1.334"
                     /inference="COORDINATES: protein motif:HMM:NF016107.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
                     /protein_id="HET9012843.1"
                     /translation="MTSSTPPIPPATPAPDAPISDAERSTSARIGSILFRHRGWLPVP
                     FLLVPLLARGTPDAMNWLLGLVLIALGEAVRLAGVAAAGTVTRRRSRTVQRLVTYGIF
                     SWMRNPLYVGNFLIWIGFIVISDVLWFIPFAIALFAIEYTLIVRYEEGVLESIFGAEY
                     LAYKHRTSRWFPRPPADDEEGEHHWAEAWRSEVSTFLQYVVIAGLFIAKQKYGWNER"
BASE COUNT          309 a          719 c          788 g          356 t
ORIGIN      
        1 cgctcgatgc gacgtacagc gccaaggcat tcggcgtcgc gctcgaacgg gcgcggcgcg
       61 cgcctgacga gcacgttctc ttctggctaa cgttcgacgg gcgatggctc gcgcgcggca
      121 acgacgtgcc gccgacgtcg cgctccgatc ccgcacccag cttccgatga cggacgtcct
      181 gcccgaagtc gtgttccaca tctatccggc cgactgcgac atgctggggc acgtcaacca
      241 tgcgacgatg ctcgccttcc tggagcgcgc ccggtgggag ctgctcgagc ggcaggacgt
      301 cggcggcgtg cacgatttcg cgagtgtccc ggtgtggtcg gtcgtgcggc acgtggacat
      361 cgactactac gcgcagtcgc tcccgggcga cgacctggcg atccgcagcg gcctgctggc
      421 ggtgaagaac accagctaca tcgtgaagca ggacgtgaag aaggtgcggg acggcgtgct
      481 cgtcgcgcag gcgtccatcg tgttcgtctg catcgaccgg tccggcaagc cggtgcgcgt
      541 gccggaggag tggcgcacgc tgctcccgca ctggccggag gatggcgaga gtcgttcgcg
      601 atgatcgcgc acctgcccga cgggctcgag gtcgcctacg acgacgtggg acgcgggacg
      661 cccgtgctct tcatccacgg ctggccgcac aaccgttcgc tgtgggccgg ccaggtgagc
      721 gggctctcga ccctggcccg ctgcatcgcc ccggacctgc gcggcttcgg cggcacgagc
      781 gtgcgcgagc cgtactccat cgaccggtat gccgacgacc tcgtcgccct gctcgatgca
      841 cgcgcggtcg accgcgcggt ggtatgcggg ctgtccatgg gcggctacgt ggcgctggcg
      901 atgctgcgac gccatcgcgt gcgcgtgcgg gccctgatcc tcaccagcac gcgcgccacg
      961 gcggacacgc ccgaagcgcg cgagaagcgg atgcggctcg tcgacttcgt gcgttcgcac
     1021 gggatggagg cgctcgcggc acgccagctg aaagcgatgg tcgggcacac gacgctggat
     1081 cgccgtccgg aggtgcgcga gtcgctgcgg cggatgatgg ccgcggcgcc gagcgaggga
     1141 gtgatcggag cgctgcacgc gatggcggag cgggcggact cgagcgccgt gctgccgacg
     1201 atcgacgtgc cgacgctcgt ggtcggtggc gccgaggacg gcttcactcc acccagcgag
     1261 ctccgcacga tggcggccga catccccgac agccgatgcg agctgctaga ggcgagcgga
     1321 catgcatgtg cctatgaacg acccggcgcg ttcaatcacg tcgtcagcga gtttctcgga
     1381 cggctgcggt ccgactgacg ccgccgattc gatgtcggcg cttgagcatt gggtgcgacg
     1441 aggcgacctt tcgacttcct tccgaccgcc cctgccatga cgtcttccac gccgcccatt
     1501 cctcccgcca ctcccgcgcc cgacgcgccg atctcggacg ccgagcgcag cacgagcgcg
     1561 cggatcggca gcatcctgtt tcggcatcgg ggctggctgc cggtgccgtt cctgctggtg
     1621 ccgctgcttg cgcgcggcac gccggacgcg atgaactggc tgctcggcct cgtgctgatc
     1681 gcgctgggcg aggcggtccg gctggccggc gtggcggcgg ccggcacggt gacccggcgg
     1741 cgttcgcgca cggtgcagcg gctcgtcacc tatggaatct tttcctggat gcggaacccg
     1801 ctgtacgtgg gaaacttcct catctggatc ggcttcatcg tgatctcgga cgtgctctgg
     1861 ttcatcccgt tcgcgatcgc gctgttcgcg atcgagtaca cgctgatcgt gcgatacgag
     1921 gagggggtgc tcgagtcgat cttcggcgcg gagtatctcg cgtacaagca ccgcacgtcg
     1981 cgctggtttc cgcggccccc ggcggacgac gaggagggcg agcaccactg ggccgaggca
     2041 tggcgcagcg aggtctcgac gttcctgcag tacgtcgtga tcgccgggct gttcatcgcg
     2101 aagcagaagt acgggtggaa cgagcggtga ggcggtgagg cggtgaggcg gtgaggcggt
     2161 gaggccgtga ag
//
LOCUS       DASSYW010000851         2493 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_941662, whole genome shotgun sequence.
ACCESSION   DASSYW010000851 DASSYW010000000
VERSION     DASSYW010000851.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2493)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2493)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2493
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_941662"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1366)
                     /locus_tag="VFN38_13555"
     CDS             complement(<1..1366)
                     /locus_tag="VFN38_13555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HET9012844.1"
                     /translation="MVKRIIEWAVANKLIVLIATAALSIGGLYAVSQTPLEALPDLSD
                     VQVIVQADYSEQAPRIVEDQVTYPIAAEMLKVPGARTVRGYSFFGVSFVYVIFEDGTD
                     LYWARSRVLEYLSGIKGKLPASVTPTMGPDATGLGWVFQYVLEDTTGRKTLAELRSLQ
                     DWYLRYQLTAVPGVAEVASVGGFEKQYQVDIDPARLLAYGIPVNQVMGAIQNANADVG
                     AMVMELSEREYMVRGLGYLKSIQDIENVVVGATSSGTPIRVAELGRVSIGPAVRRGVT
                     DLNGRGDAVGGIVVMRFGENALATIGRVKARLAEASSGLPPGVVIRPVYDRSGLIHEA
                     IDTIRETLTQEAIIVALICIVFLLHARSALVAAVSLPIGVLIAFIALRAFGIGADIMS
                     LGGIAIAIGEMIDAAIVLVENMHKHLERRAAPGERVFDTSRLTTAERWELVVVSAKEV
                     GPSLF"
     gene            complement(1369..>2493)
                     /locus_tag="VFN38_13560"
     CDS             complement(1369..>2493)
                     /locus_tag="VFN38_13560"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HET9012845.1"
                     /translation="GDSARPVALSPEGARRIGVTYAVAALGSLDREVRSGGQIAFDER
                     RVQTIAPKIDGWVERLYVNATGQAVGVGQPLLTIYSPMLVQAQEELLLAKRLQGDVSQ
                     GSAEAQRSAAELLASARRRLEYWDISRAEVAAVERSGQVRKSLTLRSPAGGYVLEKNV
                     LPGQRIMAGEPLFKVADLRSVWVEGDVFEQDLADMRIGKVVHADFQALPDDHRMGRID
                     YIYPTINPETRTAKIRVVLPNGDLRLKPGMYATLRIESGARGGVVTVPRDAVLSTGQR
                     HIVFVRGANGQLAPREVALGASGGERVEVRRGLNAGETVVASATFLIDAESNLGKALG
                     GMGDMPGMETTAPPTPLPMQAVPPVVRPPEQDHSRHQQGD"
BASE COUNT          367 a          923 c          835 g          368 t
ORIGIN      
        1 agaagagcga cgggccgacc tccttcgccg agacgacgac gagctcccac cgctcggccg
       61 tcgtgaggcg cgaggtatcg aacacgcgct cgcccggcgc cgcccgccgc tcgagatgct
      121 tgtgcatgtt ctccacgagc acgatggcgg cgtcgatcat ctcgccgatg gcgatggcga
      181 tgccgccgag cgacatgatg tccgccccga tgccgaacgc ccgcagggcg atgaacgcga
      241 tcagcacgcc gatcggcagc gacacggcgg ccacgagcgc ggagcgcgcg tgcaggagaa
      301 acacgatgca gatgagcgcc acgatgatcg cttcctgcgt cagcgtctcg cggatcgtgt
      361 cgatcgcctc gtgaatcagc ccgctgcggt cgtacaccgg ccggatcacc acccccggcg
      421 gaaggccgct gctcgcttcc gcgagccggg ccttcacccg gccgatcgtc gcgagcgcgt
      481 tctccccgaa ccgcatgacg acgatgccgc ccacggcatc gccgcgcccg ttcagatccg
      541 tgaccccgcg ccgcaccgcc gggccgatgc tcacccggcc cagctccgcc acgcggatgg
      601 gcgtgcccga cgacgtcgcg ccgaccacga cgttctcgat gtcctggatg gacttcaggt
      661 accccaggcc acggaccatg tactcgcgct cggacagctc catcaccatc gcgccgacgt
      721 cggcgttggc gttctggatg gcgcccatca cctggttcac ggggatgccg tacgccagca
      781 gccgcgccgg gtcgatgtcc acctggtact gcttctcgaa cccgcctacc gaggcgacct
      841 cggcgacgcc ggggacggcg gtgagctggt accggaggta ccagtcctgg aggctccgca
      901 gctcggcgag cgtcttcctg ccggtggtgt cctcgagcac gtactggaac acccagccga
      961 gtcccgtggc gtcggggccc atcgtgggcg tcacgctcgc gggaagcttg cccttgatcc
     1021 cgctcaggta ctcgaggacg cgcgaccgcg cccagtagag gtccgtgccg tcctcgaaga
     1081 tgacgtagac gaaggacacg ccgaagaacg agtagccgcg caccgtgcgc gcgcccggca
     1141 ccttgagcat ctcggcggcg atgggatagg tgacctggtc ctcgacgatg cgcggcgcct
     1201 gctcgctgta gtcggcctgg acgatcacct gcacgtccga gaggtcgggc agcgcctcga
     1261 ggggggtctg cgacacggcg tacagcccgc cgatcgacag cgccgccgtc gcgatcagca
     1321 cgatgagctt gttcgccacg gcccattcga tgatccgctt caccatggct agtccccctg
     1381 ctggtgccgc gagtgatcct gctcgggggg acggaccact ggcgggacgg cctgcatcgg
     1441 gaggggggtc ggaggggccg tcgtctccat gcccggcatg tcgcccatgc cgccgagcgc
     1501 cttgccgagg ttggattccg cgtcgatcag gaaggtggcc gatgccacga cggtctcccc
     1561 ggcgttcagc ccgcggcgca cctccacgcg ctcgcccccc gatgcaccga gcgccacctc
     1621 gcgcggggcg agctggccgt tggccccgcg cacgaagacg atgtgacgct gccccgtgga
     1681 gaggacggcg tcgcgcggca ccgtgacgac gccgccgcgc gcgccgctct cgatgcgcag
     1741 ggtggcgtac atccccggct tgagccggag gtcgccgttc ggcagcacga cgcggatctt
     1801 cgcggtgcgc gtctcggggt tgatcgtggg atagatgtag tcgatccggc ccatccgatg
     1861 gtcgtccggc agcgcctgga agtcggcgtg caccaccttc ccgatccgca tgtcggcgag
     1921 gtcctgctcg aacacgtcgc cctccaccca caccgagcga aggtcggcca ccttgaacag
     1981 cggctcgccc gccatgatcc gctggcccgg caggacgttc ttctccagca cgtagccacc
     2041 cgcgggggat cggagcgtca gcgacttgcg cacctgcccg gaacgttcca ccgccgccac
     2101 ctcggcgcgg gagatgtccc agtactccag gcgccggcgg gcggacgcga gcagctccgc
     2161 ggcgctccgc tgcgcttcgg cactcccctg cgacacgtcg ccctgcaggc gcttcgccag
     2221 cagcagctcc tcctgcgcct gcacgagcat cggcgagtag atcgtcagca gcggctgtcc
     2281 cacgccgacg gcctgccccg tggcgttgac gtagagccgc tccacccacc cgtcgatctt
     2341 gggcgcgatg gtctgcacgc gccgctcgtc gaaggcgatc tgcccgccgc tccgaacctc
     2401 cctgtcgagc gatcccaggg cggccaccgc gtacgtgaca ccgatgcgcc gcgcgccttc
     2461 gggggagagg gccaccgggc gcgcgctgtc gcc
//
LOCUS       DASSYW010000852         2611 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_94182, whole genome shotgun sequence.
ACCESSION   DASSYW010000852 DASSYW010000000
VERSION     DASSYW010000852.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2611)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2611)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2611
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_94182"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2208
                     /locus_tag="VFN38_13565"
     CDS             <1..2208
                     /locus_tag="VFN38_13565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012846.1"
                     /translation="RFQDTPYADPIYDQVDRFFNPGTFLKNTVTLSQRAGRTNWLLSF
                     NNNKEGGVVLNSGAYDQNNIRLNLDHQLRDDFKLSFSGYHNRSQRQNLYGDTFFDLIN
                     QAPDVDLLVPDPDGTPYLFQGDPEGREENPLYVLATEDNVRRRTRTQGSVEARWTPLS
                     WFNVDGNVSYDRSDRRNNFFLDAGLKTEGFGTGGLGEIAQGVGQTDAINAAVSANFLQ
                     SVGDFTLRSTLRALMERENNEFTYANGTVFATPGVRSLSNATITRDSSSIEEIRSTGY
                     AATGAADYKGKYIFDALVRRDGSSLFGPENPWNVYHRLSGAYRMAEESWWPIKSISEF
                     KLRASQGTAGGRPDFDDQFETFDFIAGGGLRKSTLGNKFLKPEHATETEIGLDMIVKE
                     RYSLQLSYAKNKVVDQLVQIPLSAFYGYTSQWQNAGTVEGNTIEATLEAQVMSRPTLS
                     WRMGFVADRSRNRITEFNRSCFQTNTIGYRCAGETLGAMYGFRFIKDASELPADAQAR
                     ASEFQVNDEGILVYTGAGNAYTEGESKRLWGTTTTIGTGVYNWGMPITQKDAAGNAAV
                     VKIGDGNPDFHFGWTNNVTWKDLSFFALLDAQKGGNVYNQTMQRMFQYGRSGEVDQAG
                     KPQELKKTVDYFVALYAANDPTDYFVQPGGFVKLREMSVRYKVPTNLVSSLGRFGARG
                     MTLGLVGRNLITRTDYKGYDPEVSDSQFPNTIKLDSFGYPRYRTFTGSVQIDF"
     gene            2226..>2611
                     /locus_tag="VFN38_13570"
     CDS             2226..>2611
                     /locus_tag="VFN38_13570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012847.1"
                     /translation="MQRRTYWVGAAVLLGAMACQDLAVTNPNEPDRERATKQPVSAES
                     FVSSSFRSWWPVAGHDDYPSWAFSTMANEVTSGFADFGQLELSAEPRSAWNNSPVNAR
                     NQVSEGPWYGLYRTISSVNDALIAIDS"
BASE COUNT          504 a          873 c          849 g          385 t
ORIGIN      
        1 cgcttccagg acacgccgta cgccgatccg atctacgacc aggtggaccg gttcttcaac
       61 ccgggcacct tcctcaagaa caccgtcacg ctgtcgcagc gcgcggggcg cacgaactgg
      121 ctcctctcct tcaacaataa caaggagggc ggcgtcgtcc tcaacagcgg ggcgtacgac
      181 cagaacaaca tccgcctcaa cctcgaccac cagctgcgcg acgacttcaa gctctcgttc
      241 agcggctatc acaaccggtc gcagcggcag aacctgtacg gcgacacgtt cttcgacctg
      301 atcaaccagg cgccggacgt ggacctgctc gtcccggatc cggacggcac gccgtacctc
      361 ttccagggcg atcccgaagg acgcgaggag aatccgctgt acgtgctggc cacggaggac
      421 aacgtccgcc gtcgcacgcg cacgcagggg agcgtggagg cgcgctggac gccgctctcc
      481 tggttcaacg tggacggcaa cgtgagctac gaccgctccg accgccgcaa caacttcttc
      541 ctcgacgccg gcctcaagac cgaaggattc ggcacgggcg gcctcggcga gatcgcgcag
      601 ggcgtgggac agaccgacgc gatcaacgcc gcggtgagcg cgaacttcct ccagtcggtg
      661 ggcgacttca cgctgcgctc cacgctgcgc gcgctgatgg agcgggagaa caacgagttc
      721 acctacgcga acggcaccgt gttcgccacg ccgggcgtgc gcagcctgag caacgccacg
      781 atcacgcgtg acagctcgtc gatcgaggag atccgctcca ccggctacgc cgcgaccggc
      841 gccgccgact acaagggcaa gtacatcttc gacgcgctcg tgcgccgcga cggcagctcg
      901 ctgttcggcc cggagaaccc ctggaacgtc tatcaccgcc tcagcggcgc gtaccgcatg
      961 gccgaggagt cgtggtggcc gatcaagtcg atctcggagt tcaagctgcg cgcgtcgcag
     1021 gggacggccg gcggccgtcc ggacttcgac gaccagttcg agaccttcga cttcatcgcc
     1081 ggcggcgggc ttcgcaagag cacgctcggc aacaagttcc tcaagcccga gcacgcgacc
     1141 gagacggaga tcgggctcga catgatcgtg aaggagcgct actcgctcca gctctcgtac
     1201 gcgaagaaca aggtcgtgga ccagctggtg cagatccccc tctccgcctt ctacggctac
     1261 acgtcgcagt ggcagaacgc gggcacggtg gagggcaaca cgatcgaggc gacgctcgag
     1321 gcgcaggtga tgagccgccc gacgctgagc tggcggatgg gcttcgtggc cgatcgctcg
     1381 cgcaacagga tcacggagtt caaccgctcc tgcttccaga cgaacaccat cggataccgc
     1441 tgcgcgggtg agacgctggg cgcgatgtac ggcttccgct tcatcaagga cgcgagcgag
     1501 ctgccggccg acgctcaggc gcgcgcgagc gagttccagg tgaacgacga ggggatcctc
     1561 gtctacaccg gcgcgggcaa cgcctacacc gagggcgagt cgaagcgcct ctggggcacc
     1621 acgacgacga tcggcaccgg cgtctacaac tggggaatgc cgatcacgca gaaggacgcc
     1681 gcgggcaacg ccgccgtggt gaagatcggc gacggcaacc cggacttcca cttcggctgg
     1741 acgaacaacg tgacgtggaa ggacctgagc ttcttcgcgc tgctcgatgc gcagaaggga
     1801 ggcaacgtct acaaccagac gatgcagcgc atgttccagt acggccgcag cggcgaagtg
     1861 gaccaggcgg gcaagccgca ggagctgaag aagacggtgg actacttcgt cgcgctgtac
     1921 gcggcgaacg atcccaccga ctacttcgtg cagccgggcg gcttcgtgaa gctccgtgag
     1981 atgtcggtgc gctacaaggt gccgacgaac ctcgtctcct cgctcggcag gttcggcgcg
     2041 cgcgggatga ccctcggcct cgtgggtcgc aatctcatca cgaggaccga ttacaagggc
     2101 tacgaccccg aggtgagcga ctcgcagttc ccgaacacga tcaagctcga cagcttcggc
     2161 tatccgcgct accgcacgtt cacgggcagc gtccagatcg acttctgacc cacacaatgg
     2221 acatcatgca gagacgcaca tactgggtcg gagccgcggt gctcctgggc gcgatggcgt
     2281 gccaggatct ggcggtgacc aaccccaacg agccggatcg cgagcgcgcg acgaagcagc
     2341 cggtgtcggc cgagtcgttc gtgtcgagct ccttccgcag ctggtggccg gtggcgggac
     2401 acgacgacta tccgtcgtgg gccttctcga cgatggcgaa cgaggtcacg tcgggattcg
     2461 ccgacttcgg ccagctcgag ctgagcgccg agccgcgctc ggcgtggaac aacagcccgg
     2521 tgaatgcgcg caaccaggtg agcgaggggc cgtggtacgg gctctatcgc accatctcct
     2581 cggtgaacga cgcgctcatc gcgatcgact c
//
LOCUS       DASSYW010000853         2169 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_781555, whole genome shotgun sequence.
ACCESSION   DASSYW010000853 DASSYW010000000
VERSION     DASSYW010000853.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2169)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2169)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2169
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_781555"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1097)
                     /locus_tag="VFN38_13575"
     CDS             complement(<1..1097)
                     /locus_tag="VFN38_13575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012848.1"
                     /translation="MAAAQGADEVAAAPRVRLVLTPTAYSGTGFVEAAFRLSEDAYVL
                     VVAVDLDRRIRVLHPESPDESGFATAGDRNRLTRFFAGFGGAQFGRYTSYSLTQRISP
                     FGGEGVMIAIASERPLQLERLMDAGGDWDEDKLANLVFDQSLAGAAHALGRALVLTGQ
                     EYSTDYTTLGGRRTLGGYTSLAARSFGDCGGLGAMDAGFSTYSFGYADGPRYDGMGAV
                     LLGFHRVDGQLFARYAYASGGCGRPLYYDVPVPGPRVTPPDTTKHDTTVVARRQPRFP
                     GAPRFPQLSPDSASGPLTRRSSDRASAGEATGRLRPPVAGGLRFRPPEQLPVEGIRPA
                     ERRMTPRDLDAPARRAPSAEQAPPGQAGDAP"
     gene            1351..>2169
                     /locus_tag="VFN38_13580"
     CDS             1351..>2169
                     /locus_tag="VFN38_13580"
                     /inference="COORDINATES: protein motif:HMM:NF024909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HET9012849.1"
                     /translation="MESPAPRADLYDPAALAALGHIEVAARWIVDGFLSGLHRSPRKG
                     FSVEFAEFRPYQPGDDLRYVDWKIAARADRWVVKQYEEETNLRATLILDVSRSMDWRG
                     APADVRLTKQSYAEQLVAALALLLLRQRDAVGLIRFDDAVRTSIPPRARTTQWRRLAA
                     ALTERSGGRASDLAAALGQAARLVTRRGMVVLVSDLLVDVDAAIPALRGLRAAGHDVT
                     VLHVMDPAEHRFSLPGEAQYEDSETALAVPAAGADVRAAYDRTVATVIAEWRDAL"
BASE COUNT          287 a          847 c          745 g          290 t
ORIGIN      
        1 ctgggcgcgt caccggcctg gccaggcggc gcctgctcgg cgctcggcgc gcgccgcgcc
       61 ggcgcgtcga gatcccgcgg cgtcatgcgc cgctccgccg gccggattcc ctcgacggga
      121 agctgctcgg gcggccggaa ccgcaggccc cctgccaccg gcggccggag gcggccggtc
      181 gcctcgccgg cgctggccct gtcgctgctc cgccgcgtca gcggaccgct ggcgctgtcg
      241 ggtgacagtt ggggaaaccg gggcgcgccc gggaagcggg gctggcggcg cgcgaccacc
      301 gtggtgtcgt gcttcgtcgt gtccggcggc gtgacgcgcg gcccgggcac cggaacgtcg
      361 tagtagagcg ggcgcccgca ccctccgctc gcgtacgcgt accgcgcgaa cagttgcccg
      421 tccacgcggt ggaagccgag cagcaccgcg cccatgccgt cgtaccgcgg tccgtcggcg
      481 tagccgaagg aatacgtcga gaagccggcg tccatcgcgc ccaggccgcc gcagtcgccg
      541 aagcttcgcg cggcgaggct ggtgtagccg cccagcgtgc gccggccgcc cagcgtggtg
      601 tagtccgtac tgtattcctg gcccgtgagc accagcgcgc gccccagcgc gtgggccgcg
      661 ccggcgaggc tctggtcgaa cacgaggttg gccagcttgt cctcgtccca gtcacccccg
      721 gcgtccatca gccgctcgag ctgcagcggc cgctccgacg cgatcgcgat catcaccccc
      781 tctccaccga agggcgagat gcgctgcgtc aggctgtagc tcgtgtatcg cccgaactgc
      841 gcacccccga acccggcgaa gaagcgcgtc agccggttgc ggtcgcccgc cgtcgcgaag
      901 ccgctctcgt cgggagactc gggatggagc acgcggatcc ggcggtccag gtccaccgcc
      961 accaccagca cgtacgcgtc ctccgagagc cggaacgcgg cctcgacgaa cccggtgccg
     1021 gagtaggcgg tgggtgtgag caccagcctg acgcgcggcg cggccgcgac ttcgtccgcg
     1081 ccctgcgcgg cggccatcgc gacggagtcc ctgatgcgct cgtagcgcgc cgcgacacct
     1141 tccgcacggc gcgccggagc cgaccccacg gaggcacaac ccgacagtac gacggctgcc
     1201 accaccgaac gacctgcgca cctggctgcg aggggggaca tgagcggacg ctccggaaag
     1261 tgttgtatac aacttgggac acaagttccg gctgcgcaat acccccgcca gcgcgtcgtc
     1321 ccgccgcccg gccgttacct tacccccgtc atggagtctc ccgcaccccg cgccgacctc
     1381 tacgacccgg cggccctcgc cgccctcggc cacatcgagg tcgccgcccg ctggatcgtc
     1441 gatggcttcc tcagcggact gcaccgctcg ccccgcaagg gattctcggt ggagttcgcc
     1501 gaattccgtc cgtaccagcc cggcgacgac ctccgctacg tcgattggaa gatcgccgcc
     1561 cgcgccgacc ggtgggtcgt gaagcagtat gaggaggaga cgaacctccg cgccaccctg
     1621 atcctcgacg tcagtcgttc catggactgg cgcggtgccc ccgccgacgt tcgcctcacc
     1681 aagcagtcgt acgccgagca gctcgtggcc gcgctcgcgc tgctgctgct gcgccagcgc
     1741 gacgccgtgg gcctcatccg gttcgacgac gccgtgcgga cgagcatccc tcctcgcgcc
     1801 cgaaccaccc agtggcgccg tctcgccgcc gccctcacgg aacggtccgg gggccgcgcc
     1861 tcggatctcg cggccgcgct cgggcaggcc gcgcgcctcg tcacccggcg cggcatggtg
     1921 gtgctcgtga gcgacctcct cgtcgacgtc gacgcggcga tccccgcgct gcgcgggctg
     1981 cgcgccgccg gccacgacgt cacggtgctc cacgtgatgg acccggccga gcatcgcttc
     2041 tccctccccg gcgaagcaca gtacgaggat tccgagacgg cgctcgccgt tcccgccgcg
     2101 ggcgccgacg tgcgcgcggc ctacgacagg acggtggcga ccgtgatcgc cgaatggcgc
     2161 gacgcgctc
//
LOCUS       DASSYW010000854         2046 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1426509, whole genome shotgun sequence.
ACCESSION   DASSYW010000854 DASSYW010000000
VERSION     DASSYW010000854.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2046)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2046)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2046
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1426509"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(37..1005)
                     /locus_tag="VFN38_13585"
     CDS             complement(37..1005)
                     /locus_tag="VFN38_13585"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HET9012850.1"
                     /translation="MKKTSDKPAAAAKAATKAPKATAAKKRAPRAKGEGVTEAQAAAH
                     AQADDVTTDSLQLFFNAARRYPLLTAQEEVFLAQRIEKGDMAAKDKMINSNLRLVVSV
                     ARKYQGHGLSLGDLVQEGMLGLIRASEKFDWRRGFKFSTYATLWIRQSIQRGLENSSR
                     TIRLPVHIAQRERKINRAERELATRLGREPTEDEIAAAVELPVDQVIEIRKAARPLTS
                     LDQPIGEDGETSFGELITSPQPAVEDEVVADAGTTAVQQAVMSLPERERNVVELRFGL
                     GGEEPTPLRETGRRLGISAERVRQIEEEALERLAESGELSALHEAA"
     gene            complement(1409..1678)
                     /locus_tag="VFN38_13590"
     CDS             complement(1409..1678)
                     /locus_tag="VFN38_13590"
                     /inference="COORDINATES: protein motif:HMM:NF024248.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HET9012851.1"
                     /translation="MLHALSDPVRLQIVRTLADREEQACSAVEASVSKSTLSHHFKVL
                     REAGVTHTRANGTQRLVSLRQDDLEARFPGLLRSVLDAHEVAEAI"
     gene            complement(1826..>2046)
                     /locus_tag="VFN38_13595"
     CDS             complement(1826..>2046)
                     /locus_tag="VFN38_13595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012852.1"
                     /translation="LPAAAMGVVALLAPALLAALIAVQTFGRDHALALDERALGLAAA
                     AVALALRAPVLAVVVIAAVTTALARAVG"
BASE COUNT          272 a          692 c          730 g          352 t
ORIGIN      
        1 gccgcggccg tcgaagaccg tcaggtgtga cgaggcctag gcggcctcgt gcagcgcgga
       61 cagctcgccg ctctcggcga ggcgctcgag cgcctcctcc tcgatctggc ggacccgctc
      121 ggcggagatg ccgagccggc ggccggtctc gcgcagcggc gtgggctcct cgccaccgag
      181 tccgaagcgc agctcgacga cgttccgctc gcgctcgggc aggctcatca cggcctgctg
      241 cacggcggtg gtgccggcgt ccgcgacgac ctcgtcctcg accgcgggct gcgggctggt
      301 gatcagctcg ccgaacgacg tctcgccgtc ctcgccgatc ggctggtcga gcgaggtcag
      361 cgggcgggcc gccttcctga tctcgatcac ctggtcgacg ggcagctcga cggccgccgc
      421 gatctcgtcc tcggtcggct cgcggccgag ccgggtggcg agctcacgct cggcgcggtt
      481 gatcttgcgc tcgcgctggg cgatgtggac gggcaggcga atcgtgcggg acgagttctc
      541 gagcccgcgc tggatcgact gacggatcca cagcgtcgcg tacgtggaga acttgaagcc
      601 acggcgccag tcgaacttct ccgaggcgcg gatgaggccg agcatgccct cctgcaccag
      661 gtcgccgagc gacagcccgt ggccctggta cttcctcgcc accgagacga cgagcctcag
      721 gttcgagttg atcatcttgt ccttggccgc catgtcgccc ttctcgatgc gctgggcgag
      781 gaagacctct tcctgcgcgg tgagcagcgg gtagcggcgt gcagcgttga agaacagctg
      841 cagcgagtcc gtggtgacgt cgtcggcctg agcgtgcgcg gcggcctggg cctcggtcac
      901 gccctcgccc ttggcacgcg gagcgcgctt cttggcagca gtcgccttcg gcgccttggt
      961 ggcggccttc gcagcggcgg cgggcttgtc ggaagtcttc ttcacggggg tggtggtctt
     1021 cttcgcggcg gtcttcttgg gggtcttctc gtgggtcgta cgcttggtgg cgcgcttggg
     1081 ggtttcagca gcgtcgtgtt ccgctccgcg gcgacgggtg ctgggggcgg ctgcgcctgc
     1141 ccggcgggac ccagtttcgg tgcgctttcc ggccttcgga ccggtggtcg tcgtcttcgt
     1201 ggctatctca ctccttcggg cgtgtgattt cgacagttcg aagctgatag aagtatacag
     1261 attcataccc gattggctag tcagccaatc tgtgcgatct gtccaggaac gcgggcaggc
     1321 ggcgtccgcg catcctttgg tccttacctg cttcggggcg ggacaaacca gaaccccgcg
     1381 ggcgcgcgta ggttgcgccc aaattgcgct aaatcgcctc tgcgacctcg tgcgcgtcga
     1441 gcaccgagcg gaggagcccc ggaaagcggg cctccaggtc atcttggcgc aaagacacaa
     1501 gcctttgggt gccgttggcc cgcgtgtggg tgacgccggc ctcgcgcagc accttgaaat
     1561 ggtgcgacag cgtggacttc gacaccgacg cctccaccgc gctgcaggcc tgctcctcgc
     1621 ggtcggccag cgtccggacg atctggagcc ggaccgggtc gctcagggcg tggagcacct
     1681 cgggaaggtt gagctcctct acgcgtgggt ggtgaagtgt tcgcaactcg taagtcgttc
     1741 gatcagtgcc gaagcttcga aagaaggata gcggccggtt tccagccttc gcgcgcttcg
     1801 caagcctccg cccaggacgc tcggcctacc ccaccgcccg cgccagcgcg gtggtgaccg
     1861 cggcgatcac cacgacggcc agcaccggcg cacggagcgc gagcgccacc gcggcggcgg
     1921 cgagcccgag ggcgcgctcg tcgagcgcga gcgcgtggtc gcggccgaag gtctgcaccg
     1981 cgatcagggc cgccagcaac gcgggcgcga gcagcgccac cacccccatc gcggccgcgg
     2041 gcagcc
//
LOCUS       DASSYW010000855         3283 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_914835, whole genome shotgun sequence.
ACCESSION   DASSYW010000855 DASSYW010000000
VERSION     DASSYW010000855.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3283)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3283)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3283
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_914835"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..221)
                     /locus_tag="VFN38_13600"
     CDS             complement(<1..221)
                     /locus_tag="VFN38_13600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012853.1"
                     /translation="MSPRPMLRVLVLGAALAPGTASPAIAQHPAAATDSVSYLSLQAE
                     AASADPRQRQLRLQEAATELRLRTLAAERL"
     gene            complement(218..907)
                     /locus_tag="VFN38_13605"
     CDS             complement(218..907)
                     /locus_tag="VFN38_13605"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR family transcriptional regulator"
                     /protein_id="HET9012854.1"
                     /translation="MPAPPRPGGSDVAAAGAVAGAGSDADAEQRILDAAHKVFVRRGT
                     AGARMQEIADEAGVNKALLHYYFRNKSRLADGVFQRVAGGIFARVIEVARSGADLEEI
                     VRSIIAIYLDQLSRTPYAPAYLIAELNQHPERGRQLVQTLSQLREGVSPDVALRALQA
                     QLDTRVRAGTIRPISAQQFLTNLVSLCIFPFAARPMLCAVMGMDDGGFREFIEERKRT
                     LPDFFLGALRP"
     gene            1104..2006
                     /gene="gnd"
                     /locus_tag="VFN38_13610"
     CDS             1104..2006
                     /gene="gnd"
                     /locus_tag="VFN38_13610"
                     /inference="COORDINATES: protein motif:HMM:TIGR00872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004616 - phosphogluconate dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="decarboxylating 6-phosphogluconate
                     dehydrogenase"
                     /protein_id="HET9012855.1"
                     /translation="MQLAMIGLGRMGGNMTERLMRDGHSLVAYDRDPAAVARYVKLGA
                     KPATDLPHLTGQLGGPRIVWIMVPAGAPVDETIAALRPGLTGGDIVIDGGNSNYKETR
                     ARAERLAADGIHYIDAGTSGGIWGLENGYCLMVGGERGPVAHCEPIFRSLAQADGYAH
                     VGPPGAGHYVKMVHNGIEYGMLQAFAEGYEILGKSSKYPELDLHQIAELWQHGSVVRS
                     WLNELAVRAFAKDPRLDKLKGYVSDSGEGRWTVAEAIEEDVPAPVITLSLLMRLRSRQ
                     EDSFGGKVIAALRNEFGGHAVKGS"
     gene            2003..>3283
                     /gene="zwf"
                     /locus_tag="VFN38_13615"
     CDS             2003..>3283
                     /gene="zwf"
                     /locus_tag="VFN38_13615"
                     /inference="COORDINATES: protein motif:HMM:TIGR00871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004345 - glucose-6-phosphate
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HET9012856.1"
                     /translation="MSAPVAGHIRTTPKISGQFGVVPGAPAEQADPCTMVIFGATGDL
                     TKRKLFPALYELAAQHLLHPTFAVLAVGRETAETDESYRERIRSALVDSDEVKHFDDE
                     VWKRLAARTFYAGGDASDASAYVSITRRLADIERDRPAAERNRFFYMAVPPSVFEPIV
                     RHLSSSGLVPRHDNPKERPWARVVVEKPFGHSLGTARALNALVLSLFNEHQVYRIDHY
                     LGKETVQNVLVFRFANSIFEPLWNRRHIAHVQITAAEEVGVELRGKYYEEAGVVRDMF
                     QNHLLQLLALTAMEPPPSMTADAVRDEKVKVLKSIRWLTPESIPTSAVRAQYAAGAMR
                     SSKVPGYRDEPNVAKDSHTPTYAAARFYIDNWRWQGVPFYLRSGKRLGKRVSEIAVQF
                     HEPPHLMFGGATGHAPLQPNALVMRVQPNEGISLS"
BASE COUNT          503 a         1109 c         1222 g          449 t
ORIGIN      
        1 agccgctcgg cggcgagggt gcgcaagcga agctcggtcg ccgcctcctg gagccggagc
       61 tgccgctgcc tgggatcggc gctcgcggcc tccgcctgca gcgacaggta gctcaccgag
      121 tcggtcgcgg cggccgggtg ctgcgcgatg gcgggggacg cggtgcccgg cgcgagcgcc
      181 gcgccgagga cgagcacgcg aagcatcggg cgggggctca tggccggagc gctccgagga
      241 agaagtccgg gagggtgcgc ttccgctcct cgatgaactc ccggaatccc ccgtcgtcca
      301 tccccatcac ggcgcacagc atcggacgcg ccgcgaaggg gaagatgcag agggacacga
      361 ggttggtgag gaactgctgg gccgagatcg ggcggatggt gccggcgcga acgcgggtgt
      421 cgagctgcgc ctggagggcg cgcagggcga cgtcgggcga cacgccctcg cgcaactggc
      481 tcagcgtctg gacgagctgg cgcccgcgct ccgggtgctg attgagctcg gcgatgaggt
      541 aggcgggggc gtagggggtg cgggagagct ggtcgagata gatcgcgatg atgctgcgga
      601 cgatctcctc caggtcggcg ccgctgcggg cgacctcgat caccctggcg aagatgccgc
      661 cggcgacgcg ctggaacacg ccgtcggcga ggcggctctt gttgcggaag tagtagtgca
      721 ggagcgcctt gttcacgccg gcctcgtcgg cgatctcctg catgcgggcg cccgcggtgc
      781 cgcggcggac gaacaccttg tgcgcggcgt cgaggatccg ctgctccgcg tcggcatcgg
      841 accccgcgcc ggcgactgcc ccggcggcgg cgacgtcgga cccgccgggg cgcggggggg
      901 cgggcatcaa ggtccggttg gctcgcttaa ccatgtggtt tcaccgtttg gttaacaaaa
      961 ggtaccaccg acccggcggc gtccgcaacc ccggccgagc ggcacggccg gtgctcctcc
     1021 gatgaacctt tccggaaccc tcgtggctta gcttgaggcg gcgacgccgg tgcgccgcct
     1081 tcacccgcac cccgagcaac acgatgcagc tcgcgatgat cggcctgggc aggatgggcg
     1141 gcaacatgac ggagcggctc atgcgcgacg gacactcgct ggtcgcctac gaccgcgacc
     1201 ccgccgccgt cgcccgctac gtgaagctcg gcgccaagcc ggccaccgac ctcccccatc
     1261 tcaccggaca gctcggcgga ccgcgcatcg tctggatcat ggtccccgcc ggcgcgccgg
     1321 tggacgagac gatcgccgcg ctgcgcccgg ggctgacggg gggcgacatc gtcatcgacg
     1381 gcggcaactc gaactacaag gagacgcggg cgcgcgccga gcgcctcgcc gccgacggca
     1441 tccattacat cgatgccggc acgagcggag gcatctgggg gctggagaac ggctactgcc
     1501 tgatggtcgg gggcgagcgg ggcccggtgg cgcactgcga gccgatcttc cgctcgctcg
     1561 cgcaggcgga cgggtacgcg cacgtgggcc cgccgggcgc gggacactac gtgaagatgg
     1621 tgcacaacgg gatcgagtac ggcatgctcc aggcgttcgc cgaggggtac gagatcctcg
     1681 gcaagtcgag caagtatccc gagctggacc tccaccagat cgccgagctg tggcagcatg
     1741 gcagcgtggt gcggtcgtgg ctcaacgagc tggcggtgcg cgcgttcgcc aaggatccgc
     1801 ggctcgacaa gctcaagggc tacgtctccg actccggcga agggcgctgg acggtggcgg
     1861 aggcgatcga ggaggacgtg cccgcgccgg tgatcacgct gtcgctgctg atgcggctcc
     1921 gctcgcggca ggaggattcg ttcgggggga aggtgatcgc ggcgctgcgc aacgagttcg
     1981 gcgggcacgc ggtgaagggc tcgtgagcgc ccccgtcgcg ggtcacatcc gcaccacgcc
     2041 gaagatcagc gggcagttcg gcgtcgtgcc cggcgccccc gccgagcagg ccgacccgtg
     2101 cacgatggtg atcttcgggg ccaccgggga cctcaccaag cgcaagctgt tcccggcgct
     2161 ctacgagctc gccgcgcagc acctgctgca ccccaccttc gccgtgctgg cggtggggcg
     2221 cgagacggcg gagacggacg agtcgtatcg cgagcggatc cggtcggcgc tcgtggactc
     2281 cgacgaggtg aagcacttcg acgacgaggt gtggaagcgg ctggcggcgc gcaccttcta
     2341 cgccggcggc gacgcgagcg acgcgtcggc ctacgtgtcc atcacgcgcc ggctcgccga
     2401 catcgagcgc gaccggccgg cggcggagcg caaccgcttc ttctacatgg cggtgccgcc
     2461 gagcgtgttc gagcccatcg tccggcacct gtcgagcagc ggcctcgtgc cccgccacga
     2521 caaccccaag gagcggccgt gggcccgggt ggtggtggag aagccgttcg ggcacagcct
     2581 cggtacggcg cgggcgctca acgcgctcgt gctgtcgctg ttcaacgagc accaggtgta
     2641 ccggatcgac cactacctgg gcaaggagac ggtgcagaac gtcctcgtgt tccggttcgc
     2701 gaactccatc ttcgagccgc tgtggaaccg gcgccacatc gcgcacgtgc agatcacggc
     2761 ggccgaggag gtgggcgtcg agctccgcgg caagtactac gaggaagcgg gggtggtgcg
     2821 cgacatgttc cagaaccacc tgctccagct cctcgccctc accgccatgg agcccccccc
     2881 gtcgatgacg gcggacgcgg tgcgcgacga gaaggtgaag gtgctgaagt ccatccgctg
     2941 gctcaccccg gagagcatcc cgacgagcgc ggtgcgggcg cagtacgcgg cgggggcgat
     3001 gcgctcgagc aaggtgccgg gctatcgcga cgagcccaac gtggcgaagg actcgcacac
     3061 gcccacctac gccgccgcgc ggttctacat cgacaactgg cgctggcagg gcgtgccgtt
     3121 ctacctgcgc agcggcaagc ggctgggcaa gcgcgtctcg gagatcgccg tccagttcca
     3181 cgagccgccg cacctgatgt tcggcggggc caccggccat gcgccgctcc agccgaacgc
     3241 gctggtgatg cgggtgcagc cgaacgaggg aatctccctc tcg
//
LOCUS       DASSYW010000856         2646 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1113311, whole genome shotgun sequence.
ACCESSION   DASSYW010000856 DASSYW010000000
VERSION     DASSYW010000856.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2646)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2646)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2646
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1113311"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..613)
                     /locus_tag="VFN38_13620"
     CDS             complement(<1..613)
                     /locus_tag="VFN38_13620"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HET9012857.1"
                     /translation="MIGVISRMPTNEQVDEVLRRTIMFRRLSADDRQRLAAVAHTREF
                     DRGETVFQEGDASDHLYTVVTGRVKVFKTTARGTDVILEIFGPGDPVGAAAVYESRAY
                     PATAVALESTACLLIPRQAFFSLLETYPTLVRGLLVGLTHRLVELTTRLTELTGGRVD
                     ARLARFLLKLANNMGQQRLEGIFIPLSLSRQELADMIGTTIETS"
     gene            665..1381
                     /gene="ric"
                     /locus_tag="VFN38_13625"
     CDS             665..1381
                     /gene="ric"
                     /locus_tag="VFN38_13625"
                     /inference="COORDINATES: protein motif:HMM:TIGR03652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster repair di-iron protein"
                     /protein_id="HET9012858.1"
                     /translation="MSQPLDAIVGDIVAADYRTAGVFEQFGIDFCCGGRRSLGEACRT
                     ASADPADVVRALTALSPHHVDDTDVTRWPVARLIDHIVSVHHAYVRAALPRIVGYLAK
                     LQEAHGARHPELARVASVFDQVSVDLVQHMLKEEQVLFPYVRELAEHAEETGDMQPSP
                     FGTVLNPIRMMEREHREAADELGTIRELTNGYTVPEDGCTTYTVSMAELARFEQDLHR
                     HVHLENNVLFPKAIQLETRS"
     gene            1483..2628
                     /locus_tag="VFN38_13630"
     CDS             1483..2628
                     /locus_tag="VFN38_13630"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 1 protein"
                     /protein_id="HET9012859.1"
                     /translation="MRVIADYRPALRDRSGVGEYVHQVARSLAQPDSGVDVTLFTSSW
                     KDRPQSDLAAIGSVRISDHRIPVSLLNVLWHRLERPSIEWMTHARYDVAFSPHPLLMP
                     ARHAARVVMVHDLDFLDHPERTRGEIRRDYPALAASHANRADRVIVPSGYTGDQVVAR
                     LGVPREHVAVCPPGIPEWRAPVGRFNPDGYALFMGTLEPRKNLGGLLEAYGRIVARRG
                     TVPKLVLAGGAGAEAGGWLEAIGRPPLAGHVEHIGYVRERDRQRVYAGARVLVLPSFD
                     EGFGMPALEAMSLGIPVVASRRGALTNLVGDAGVLVEPDDVESIANGLEGVLTDAGLA
                     QRLSERGLERARPFRWQQTACAVRDVFQAAIAARLTRLGDSASRRDS"
BASE COUNT          420 a          880 c          905 g          441 t
ORIGIN      
        1 tcgatgtttc gatcgtcgtg ccgatcatgt cggcgagctc ctgccgcgac agcgagagcg
       61 ggatgaagat cccctccagc cgctgctgtc ccatgttgtt ggcgagcttg aggagaaacc
      121 gggccagccg tgcgtcgacg cggccgcccg tcagctcagt gagccgggtc gtcaattcca
      181 ccagccgatg ggtgaggccg acgagcagac cgcggacgag cgtcggatag gtttcgagaa
      241 gcgagaagaa cgcctggcgc ggaatcagca ggcacgccgt cgattccagg gcaaccgccg
      301 tcgccgggta ggcgcgcgat tcatacaccg cggccgctcc gaccggatcg ccaggaccga
      361 agatctcgag aatcacgtcg gtgccgcgcg ccgtcgtctt gaacactttt acccggccgg
      421 tgacgacggt gtacaggtga tcggaagcgt ccccttcctg gaacaccgtc tcgcccctgt
      481 cgaattcgcg ggtgtgcgca accgcggcca gtcgctggcg gtcatcagcc gacaggcgcc
      541 gaaacatgat cgtgcgccgc aggacctcgt cgacctgttc gttcgttggc atcctcgata
      601 tgacgccgat catactggcc ggtcagccgg gtggctatgc tgagattgaa aggatgcgtg
      661 agctatgagc caaccactcg acgccatcgt cggggacatc gtggccgccg attatcggac
      721 ggccggcgtc ttcgaacagt tcggcatcga cttctgctgc ggcggccgcc gctcgcttgg
      781 cgaggcgtgc cggacggcgt cggcggatcc cgcggacgtg gtccgcgccc tgaccgcgct
      841 gtcgccgcac cacgtcgacg acactgacgt gacgcgatgg ccggtggctc gcctcatcga
      901 tcacatcgtc tccgtgcacc acgcctacgt ccgggcggcg ctgcccagaa tcgtcggcta
      961 tctcgcgaag cttcaggagg cgcacggggc caggcatccc gagctcgcgc gcgtcgcatc
     1021 ggtgttcgat caggtcagcg tcgacctcgt gcagcacatg ctcaaggaag agcaggtgct
     1081 ctttccgtac gtgcgggagc tggccgagca tgccgaagaa accggcgaca tgcagccgag
     1141 tccgtttggc acggtgctga atccgatccg gatgatggag cgcgaacatc gcgaagcggc
     1201 tgacgaactg gggacaatcc gcgagctgac caacggatac acggtgccgg aggacggctg
     1261 cacgacatac acggtcagca tggcggagct cgcccgcttc gagcaggatc tccacaggca
     1321 cgtgcacctc gaaaacaacg tgctgtttcc aaaggccatc cagctcgaaa cccgctcctg
     1381 agcccaggcc ggtttcgtcg ttgatcgtcg caaccgccgg tcagggtccc ggcgtcgatc
     1441 gggtgctact cgcacgattg cccgtgccgt cataatcaac aggtgcgtgt gatcgcggac
     1501 tatcgtccgg cgcttcgcga ccgctccggc gtgggcgagt acgtccacca ggtggcgcgg
     1561 tcgctggcgc agccggattc cggcgtcgac gtgacgctct tcaccagctc gtggaaggat
     1621 cgtccacagt ccgacctggc ggcgatcggc agcgtgcgca tctccgatca tcgcatcccg
     1681 gtcagcctcc tcaatgtcct gtggcatcgg ctggagcgcc cctcgatcga gtggatgacc
     1741 cacgcccgct acgatgtcgc gttctcgccg catccgctcc tgatgccggc gcgccatgcg
     1801 gcgcgggtcg tgatggttca cgatctcgac tttctggatc atccggagcg cacgcgcggc
     1861 gaaatccgcc gcgactaccc ggcgctggcc gcgtcgcatg ccaaccgcgc cgatcgcgtg
     1921 atcgtgccgt ccgggtatac gggcgaccag gttgtcgcgc ggctcggcgt accgcgggaa
     1981 cacgtcgccg tctgtccgcc cggcattccc gagtggcgcg cgccagtcgg ccgattcaac
     2041 cctgacgggt acgcgctgtt catgggcacg ctcgaaccca gaaaaaatct gggcggtctg
     2101 ctcgaggcgt acggacggat cgtcgcgcgt cgcggaacgg taccgaagct cgtgctggcg
     2161 ggcggggcag gagccgaggc gggcggctgg ctggaggcga tcggccgtcc accgctcgcc
     2221 ggacacgtcg agcacatcgg ctacgttcgc gagcgcgatc gccagcgcgt gtacgccggc
     2281 gcgcgcgtgc tggtgctgcc gtccttcgac gaggggttcg gaatgccggc gctcgaggcg
     2341 atgtcgcttg ggattccggt tgtcgccagc cggcgcgggg cgctcacgaa cctcgtcggg
     2401 gacgccggcg tgctcgtgga gccggacgat gtcgagtcga ttgcgaacgg gctcgagggc
     2461 gtgctgaccg acgccgggct ggcgcagcgc ctcagcgaac gcggactgga acgcgcgcgg
     2521 ccgttccggt ggcagcagac ggcgtgcgcc gtgcgcgacg tctttcaggc cgcgattgcg
     2581 gcgcggctca ctcgcctcgg cgactcggcg tcccgccgcg actcatgaac cgcgtgccgg
     2641 cgccgg
//
LOCUS       DASSYW010000857         2278 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_194287, whole genome shotgun sequence.
ACCESSION   DASSYW010000857 DASSYW010000000
VERSION     DASSYW010000857.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2278)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2278)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2278
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_194287"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..664)
                     /locus_tag="VFN38_13635"
     CDS             complement(<1..664)
                     /locus_tag="VFN38_13635"
                     /inference="COORDINATES: protein motif:HMM:NF001753.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent deacylase"
                     /protein_id="HET9012860.1"
                     /translation="MRADVGKVADEEALARARSLVREATAVVALTGAGVSAESGVPTF
                     RGAGGLWNQYRAEDLATPQAFLRDPRLVWEWYGWRRDLVMRCAPNAAHHALARASRDN
                     ENVRVITQNVDGLHAAAGGSPPIELHGSLFRMRCTGCGARRDDRDPIDASSRETLPQC
                     QWCGSLMRPDIVWFGEPLDPDVLGEASRLASVADVCLVIGTSAIVYPAAGLAELTARA
                     GGS"
     gene            complement(661..>2278)
                     /locus_tag="VFN38_13640"
     CDS             complement(661..>2278)
                     /locus_tag="VFN38_13640"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HET9012861.1"
                     /translation="LLRNESGVPDRLLSVTRDIEARKRAQEALRQSEERMRALIDRAA
                     YGIFRSTRTGRFLDVNPSLVAMLGYDSAEELMAIDIANDLYVDSDERQSWMSAIDGGM
                     HPEWFDLTWRRKDGAPIAVRLSARAARDSHGDVLWYEGIAENVTERLRREAAVRRAER
                     MASLGHTLAGVAHELNNPLAAISGFAQILLKTSLPKEDRSAIETVHREAKRAAKIVKD
                     LLTFARRQESSERHRVDLNGIVRYIADTQRYAMETHGVLCELVLSDEPAFVAADPAQL
                     EQVMLNLLVNARQALETMTAPAMAGRVASGTVRTPMIVIRTAVRGNSVALEISDNGPG
                     ITPAGLPRIWDPFWTTKEEGEGTGLGLSVVHGIVTQHGGTIDVESRVGAGTTFTVSLP
                     AYGRDTGDGRVPIEAIVSGPPSPNAERPLDILVIDDEEVIVGLLVRYFSSRGHAVVPA
                     HEGQHALRVAQRSSFDVVICDLRMPGMDGAEVIRRLKELPTCATARFILSTGDTATPA
                     VRQRIEGLALAAVVDKPYEVETLRRIVEDV"
BASE COUNT          351 a          841 c          731 g          355 t
ORIGIN      
        1 cgctcccgcc ggcgcgagcc gtgagctcgg cgagaccggc ggccgggtaa acgatcgcac
       61 tcgtgccgat caccaggcac acgtcggcga cggacgccag tcgagacgcc tcgcctaaca
      121 cgtccgggtc gagcggctca ccgaaccaca cgatgtcggg ccgcatgagc gacccgcacc
      181 actggcactg cgggagcgtc tcacggctcg aggcgtcgat cgggtcgcgg tcgtcgcgac
      241 gggccccgca ccctgtgcag cgcatccgaa agagcgagcc atgcagctcg atcggcggcg
      301 aaccgccggc cgcggcgtga agcccgtcca cgttctgtgt gatgacccgg acgttctcgt
      361 tgtcgcgcga cgctcgggcg agcgcatgat gcgccgcgtt aggcgcgcac cgcatcacca
      421 ggtcccggcg ccacccgtac cactcccaga cgagtcgcgg gtcgcgcagg aacgcctgtg
      481 gggtggcgag gtcctccgca cggtactggt tccagagccc gccggcacca cgaaacgtcg
      541 gcaccccgga ctccgcgctc acgcccgcgc cggtgagcgc gacgacggcc gtcgcctcgc
      601 gaacgagcga cctcgcgcgg gcgagcgctt cctcgtcagc gaccttgccc acgtcggccc
      661 tcatacgtcc tcgacgatgc ggcgcaacgt ctccacctcg tacggcttgt ccaccactgc
      721 cgcgagcgcg agcccctcga tccgctgtcg caccgccggc gtcgccgtat caccggtcga
      781 caggatgaac cgcgccgtcg cgcacgtcgg cagctccttc aggcgccgaa tcacctccgc
      841 cccatccatg ccgggcatcc gcaggtcgca gatgacgaca tcgaagctcg agcgctgcgc
      901 aacacggagc gcgtgctgcc cctcgtgtgc cggcacgacg gcgtgcccgc gcgacgagaa
      961 gtatcgcacg agcaggccga cgatgacctc ctcgtcatcg atcacgagaa tgtcgagcgg
     1021 acgctcggcg ttaggcgacg gtgggccgga cacgatggcc tcgatcggga cgcgtccgtc
     1081 gcccgtgtcg cgaccgtacg cgggcagcga taccgtgaac gtcgtaccgg cgcccacacg
     1141 cgactccacg tcgatcgtcc cgccgtgctg cgtgacgatt ccgtgcacga cggagagccc
     1201 gaggcccgtg ccttcgcctt cctccttcgt cgtccagaat ggatcccaga tgcggggtag
     1261 cccggccggt gtgatgcccg ggccgttgtc gctgatctcg agcgccacgc tgttgccgcg
     1321 caccgccgtg cggatcacga tcatcggcgt gcgcaccgtg cctgacgcga cgcgaccggc
     1381 catcgcaggc gccgtcatcg tttcgagcgc ctgacgagcg ttcacgagca ggttgagcat
     1441 gacctgctcc aactgcgcgg gatccgccgc gacgaacgcc ggctcgtcgc tcagcaccag
     1501 ctcacacagc acgccgtgcg tctccatcgc gtaccgctgc gtgtcggcga tgtagcgcac
     1561 gatgccgttc aggtccacgc gatgccgctc cgacgactcc tgccgtctcg cgaacgtcag
     1621 cagatccttc acgatcttcg cggctcgctt cgcctcacgg tgcaccgtct cgatcgcgct
     1681 gcgatcctcc ttcggcagac tcgtcttgag caggatctgc gcgaaccccg agatcgccgc
     1741 cagggggttg ttcagttcgt gcgcgacgcc ggcgagtgta tgaccgaggc tcgccatgcg
     1801 ctccgctcgc cgcactgccg cctcgcgccg cagacgctcg gtgacattct cggcgatgcc
     1861 ttcataccac agcacgtctc cgtgcgagtc gcgggcggcg cgtgcggaca gccgaaccgc
     1921 gatcggtgca ccgtcctttc gccgccacgt caggtcgaac cattcgggat gcatcccgcc
     1981 gtcgatcgcc gacatccagc tctggcgctc atcggaatcg acgtagagat cgttcgcgat
     2041 gtcgatcgcc atcagctcct ccgccgagtc gtagccgagc atcgcgacga gcgacgggtt
     2101 gacatcgaga aagcgaccgg ttcgtgtcga tcggaagatg ccgtacgccg cgcggtcgat
     2161 gagcgcccgc atccgctctt ccgattggcg aagagcctcc tgcgcgcgct tgcgcgcctc
     2221 gatgtcacgc gtgacgctga gcaggcggtc gggcacgccc gactcgttgc gcaggagg
//
LOCUS       DASSYW010000858         2069 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_691700, whole genome shotgun sequence.
ACCESSION   DASSYW010000858 DASSYW010000000
VERSION     DASSYW010000858.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2069)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2069)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2069
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_691700"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            60..746
                     /locus_tag="VFN38_13645"
     CDS             60..746
                     /locus_tag="VFN38_13645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012862.1"
                     /translation="MKAILFGVVALLAALPAAAQVGHDPEHSPYRDLEHKQEITWLVG
                     YMRARHDPAGVEPRSAAMTGVRYEINLAGPLAFSADVVRSFSERTKLDPAKPLATRVV
                     GTETTPVYAADLALALDLTGRKSWNHLVPQLRGGLGVVHSRAQDDSSGLSFGTPFAFN
                     FGGGLKFVPGGRLQLRADITDRVFKLSYPDPYYRKASDNTSVLTDPTPRSFYTHHTAL
                     TVGVSYLFGR"
     gene            784..1311
                     /locus_tag="VFN38_13650"
     CDS             784..1311
                     /locus_tag="VFN38_13650"
                     /inference="COORDINATES: protein motif:HMM:NF016836.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BON domain-containing protein"
                     /protein_id="HET9012863.1"
                     /translation="MTMAHERDYENMHDIDELDDRELRDLVREQLTAHTALDIDDITV
                     SAAQGSVTLTGRVGTEGEKRVAEHVLTDVLGITNFSNDLVIDPIRRAESPADIDEHLA
                     DEERRSGTLLGDVAVPLSDEANHLADSAQEDLGGTADMQQVMEDGMTWNPPDSPTPEG
                     LSGSDARPEDMGGQH"
     gene            1421..1840
                     /locus_tag="VFN38_13655"
     CDS             1421..1840
                     /locus_tag="VFN38_13655"
                     /EC_number="4.1.2.50"
                     /inference="COORDINATES: protein motif:HMM:NF013411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070497 -
                     6-carboxy-5,6,7,8-tetrahydropterin synthase activity
                     [Evidence IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase"
                     /protein_id="HET9012864.1"
                     /translation="MPTYLTRRVTFAAAHRYRVAAWSDEKNAATFGLCARPNFHGHSY
                     VCDVTVTGTVDPVTGFVADLGVLDAVLHREVRERLDHANINLDLPEFADGKLMPTGEN
                     LARFIAERVQAGLGAAARVTRVTVAEDSTLSATYEPG"
BASE COUNT          336 a          710 c          714 g          309 t
ORIGIN      
        1 cgcgacctgc gtctcgcgtg acgaccaatc aacatatccc gtacttccgg agtgaacgcg
       61 tgaaggcaat tctgttcggc gtggtggcgt tgctcgccgc gctccccgcg gcggcccagg
      121 tcggacacga tccggagcac agcccctatc gggatctcga gcacaagcag gagatcacct
      181 ggctcgtggg ctacatgcgc gcccgacacg atccggcggg cgtggagccg cggagtgcgg
      241 cgatgacggg cgtacgctac gagatcaacc ttgcgggccc gctggcgttc agcgccgatg
      301 tcgtgcggag cttctcggag cggacgaagc tcgatccggc caagccgctg gcgacgcgcg
      361 tcgtgggcac ggagacgacc ccggtgtacg cggcagacct ggcgctggcg ctcgacctga
      421 cgggacgcaa gagctggaac cacctggtgc cgcagctgcg cggcgggctt ggcgtcgtgc
      481 acagtcgcgc ccaggacgat tcgtcggggc tctcgttcgg cacccccttt gcattcaact
      541 tcggcggcgg actgaagttc gtgccgggtg ggcgactgca gctgcgggcg gacatcaccg
      601 accgcgtgtt caagctctcg taccccgatc cgtactatcg gaaggcctcg gacaacacgt
      661 cggtgctcac cgatcccacg ccccggtcgt tctacacgca ccacaccgcg ctgacggtgg
      721 gcgtgtcgta cctcttcggg cgctgagggt cgggccgccg acgactcacc ctcgacgacg
      781 gcgatgacca tggcgcacga gcgcgactac gagaacatgc acgacatcga cgagctcgac
      841 gaccgcgagc tgcgcgatct cgtgcgcgag cagctcacgg cccacacggc gctcgacatc
      901 gacgacatca ccgtgtccgc cgcgcagggc agcgtgaccc tcacgggtcg ggtcggcacc
      961 gagggcgaga agcgcgtggc cgagcatgtg ctgaccgacg tgctgggcat cacgaacttc
     1021 agcaacgatc tcgtgatcga cccgatccgg cgcgccgaga gcccggcgga catcgacgag
     1081 catctcgccg acgaggagcg ccgctccggc actctcctcg gcgacgttgc ggtgccgctg
     1141 agcgacgagg ccaatcatct tgcggactcg gcacaggagg atctgggagg gacggcggac
     1201 atgcagcagg tgatggagga cgggatgacc tggaacccgc ccgattcgcc gacacccgaa
     1261 gggctgagcg gcagcgatgc gcgcccggag gacatggggg ggcagcactg acggcaggac
     1321 gggatgacgg aatgacggga aaggcacacc gggcgcgagc ggtgtgcctt cgtcgtttcc
     1381 gtcctcccat ccgcccgtcc cgccgtctaa ccttgttccc atgcccacct acctcacgcg
     1441 tcgcgtgacc ttcgcggcgg cgcaccggta tcgggtcgcc gcatggagcg acgagaagaa
     1501 cgcggcgacc ttcggtctct gcgcgcggcc caacttccac ggccacagct acgtctgcga
     1561 cgtgaccgtg acggggacgg tcgatccggt caccggcttc gtcgccgatc tcggcgtcct
     1621 ggacgccgtg ctgcaccggg aggtccgcga gcggctcgat catgcgaaca tcaacctcga
     1681 tctcccggaa ttcgccgacg ggaagctcat gcccacgggg gagaatctcg cgcgcttcat
     1741 cgcggagcgg gttcaggcgg ggcttggcgc tgcggcacga gtcacgcggg tcacggtagc
     1801 ggaagattcc acgctgagcg cgacgtacga acccggctga ggccggcgtg accttcggcg
     1861 cgcttggtcg tgctactggc gacgcgatgc ggcgtgggca cggggcccac acggcgcgcg
     1921 ccgctctgga ggagccgtgc ccaccgcctc gccgtcgcgt cccgccaccg tccgctccac
     1981 gctcgccgag cagttcgcgc ccgtgctcca tgtccacgcc gacctcctgg gcgattgtgt
     2041 gccggtggtc gacgtcgagg agacgcagc
//
LOCUS       DASSYW010000859         3081 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1164689, whole genome shotgun sequence.
ACCESSION   DASSYW010000859 DASSYW010000000
VERSION     DASSYW010000859.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3081)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3081)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3081
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1164689"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(88..513)
                     /locus_tag="VFN38_13660"
     CDS             complement(88..513)
                     /locus_tag="VFN38_13660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012865.1"
                     /translation="MAMKKKRGTKRAGKKSARRGPAVRKRAGAKKSTAKRGAKRGAKR
                     SAKKGTAKRGGAKKSSAKRSAAKRRGPAVKRSGAKKGGAKRSTAKKSSGGGRKRSTGL
                     GARVKRVASGVAEQAQNAAVSGFEAVKDLGENIVDRVTG"
     gene            complement(645..2330)
                     /locus_tag="VFN38_13665"
     CDS             complement(645..2330)
                     /locus_tag="VFN38_13665"
                     /EC_number="3.5.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047420 - N-acyl-D-amino-acid deacylase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-aminoacylase"
                     /protein_id="HET9012866.1"
                     /translation="MRFARSPARSALAVALTSAVAALTGCAHVRSGVGSASAGEAAYD
                     VVIRHARIVDGAGTPWYTGDLALRGDRIALVGAVPDDVATRRTIDAHGLVVAPGFIDM
                     LGHSEFALLQRPRALSKITQGITSEITGEVESAWPNTVPTARETRSAQQPWASLAGYF
                     TELERRGTAINLGTYVAAGSVRRAVMGDASRQPTRDELARMEQLVDSAMRDGAMGFST
                     GLIYPPTTFFSTDELTVLARRAARYGGGYASHIRDEGAGLHDAIREAMRIGSAAGTWV
                     EIRHLKASGESNWGAMTGAVTLIDSARRAGMDVTADVYPYTASGTGLSAILPTWVQAG
                     GTDSMVARLLDPATRARLHGELSEVRRPDQVLVNSVRSDSLRQYEGVRLDSVGRARHE
                     DPYDAAFDILVADRGATSAIYFTMSEADLRLALKQPWTSIGQDAGAVTPDSTSRGRGH
                     PRGFGTFPRILGRYVREDSLLTLEEAVRKMTSLAAQRVGLAERGVLAPGMFADLVLFD
                     PTTIVDRATFEHPQELSRGVRFVFVNGTAVIDEGVETRALPGRALRGPGAERR"
     gene            complement(2419..>3081)
                     /locus_tag="VFN38_13670"
     CDS             complement(2419..>3081)
                     /locus_tag="VFN38_13670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012867.1"
                     /translation="SACGPHAHIPPRPVALANALAPTDSLARLARRLAPVLYLQRDEW
                     FPLDRAVAVVHPTRPIIAYHLLWRDDIHGSWIPFTVPTDQEVVWVGYDPSGAPTDLWT
                     YWHGKTLHTPWRSTPAIDVQWGKHGSLPRGIIESDLPRFQTLNAFYAFHYIGIVDILL
                     GRLTRPGPLGFFHSYGRYRDFSRVLVLGDSLDAVVRTDNPREQLEAVFGKPFSRKPAW
                     PR"
BASE COUNT          437 a         1130 c         1041 g          473 t
ORIGIN      
        1 tggtgctggc cttcctcgcg cgccacgccg gctgagcgac gacaggtcgc ctcaccggct
       61 tgacgcgcga gaacggccgg tggtgcgtca gcccgtcacg cgatcgacga tgttctcgcc
      121 gaggtccttc accgcctcga atcccgacac cgcggcattc tgcgcctgct cggcgacgcc
      181 cgacgcgacg cgcttcacgc gcgcgcccag cccggtcgac cgcttccgcc cgccgccgct
      241 cgacttcttc gccgtgctgc gcttggcgcc gcccttcttc gcgccggaac gcttcactgc
      301 cggcccgcga cgcttcgccg ccgaacgctt cgcgctcgac ttcttggcgc cgccacgctt
      361 ggccgtcccc ttcttggcgc tgcgcttcgc gccccgcttg gcgccgcgct tggccgtgct
      421 cttcttcgcg ccggcgcgct tccggaccgc cggtccgcgg cgtgcgctct tcttgcccgc
      481 gcgcttcgtc ccgcgcttct tcttcattgc catcgctgcg tctcctctgc cagatagtgg
      541 ctatcggtgc tgcgcgaatc gtgggtccct tgcgcaagtt tcgggcgcac gagcacgccc
      601 cgcggacttg ccgccgctca ccagcattcc catcccgctc gacactaccg ccgctccgcg
      661 cccggtccgc gcaacgcgcg accgggtagc gcacgcgtct cgaccccctc gtcgatcacg
      721 gcggtgccgt tcacgaacac gaaccgcacg ccgcgagaca gctcctgcgg atgctcgaag
      781 gtagcacggt ccacgatcgt cgtgggatcg aacagcacga gatccgcgaa catccccggc
      841 gccagcacgc cgcgctccgc cagcccgacg cgctgggcgg caagtgacgt catcttccgc
      901 accgcctcct cgagcgtgag gagcgagtct tcgcgcacgt agcggcccag gatgcgcgga
      961 aaggtgccga atccgcgcgg gtgaccacgc ccccggctcg tgctgtcggg cgtcacggcc
     1021 cccgcatcct gcccgatcga tgtccacggc tgcttgagcg cgagtcgcag gtcggcctcg
     1081 gacatggtga agtagatcgc gctcgtggcg ccgcggtccg cgacgagaat gtcgaacgcc
     1141 gcgtcgtacg gatcctcgtg ccgtgcccgc cccacggagt cgagccgcac gccttcgtat
     1201 tggcgcagcg agtccgaccg cacgctgttc accagcacct ggtcgggccg ccgcacctcc
     1261 gacagctctc catgaagtcg cgcgcgcgtc gcgggatcga ggagccgcgc gaccatcgaa
     1321 tcggtcccgc ccgcctgcac ccacgtcggc aggatggccg agagccccgt tccgctggcg
     1381 gtgtacggat agacgtccgc cgtcacgtcc atgccggcgc ggcgcgcgct gtcgatcagc
     1441 gtcacggcgc ccgtcatggc gccccagttc gactcgccgc tcgccttgag atgacgaatc
     1501 tccacccatg tccccgcagc gctgccgatc cgcatcgcct cccgaatggc atcgtggagg
     1561 ccggcgccct cgtcgcggat gtgcgaggca tatccgccgc cataccgcgc cgcgcgccgc
     1621 gccagcacgg tcagctcgtc ggtggaaaag aaggtcgtgg gcggatagat gagccccgtg
     1681 ctgaagccca tcgccccgtc gcgcatcgcc gagtcgacga gctgctccat ccgcgccagc
     1741 tcgtcccgcg tcggctggcg cgacgcgtca cccatcacgg cacggcgcac cgacccggcg
     1801 gcgacgtagg tgcccaggtt gatcgccgtg ccgcgccttt cgagctcggt gaagtagccc
     1861 gcgagcgacg cccacggctg ctgcgccgag cgcgtctcgc gtgccgtcgg caccgtgttc
     1921 ggccacgccg actccacctc gcccgtgatc tcgctcgtga tgccctgggt gatcttggag
     1981 agtgcgcgcg gccgctggag cagcgcgaac tccgaatgcc cgagcatgtc gatgaagccc
     2041 ggtgcgacga cgagcccgtg cgcatcgatg gtgcgtcggg tcgcgacgtc atccggcacg
     2101 gcaccgacga gggcgatgcg gtcgccgcgc agcgcgaggt cgccggtgta ccagggggta
     2161 cccgccccgt cgacgatgcg cgcgtgtctg atcaccacgt cgtacgcggc ttcgccggcg
     2221 gaggccgacc ccacgccgct ccgcacgtgt gcgcatcccg tcaacgcggc gacggcgctc
     2281 gtgagcgcga cggcgagagc ggagcgtgca ggagaacggg cgaatcgcat gcgcaaagat
     2341 ggtgcagcgc cgccaactcg gccagcagaa atgcgtgacg tcggcgtgtc gacaggccgc
     2401 ccgcgaagtc gaccgccgtc agcgcggcca ggccggcttt ctcgagaatg gcttgccgaa
     2461 caccgcctcg agctgttcgc gcggattgtc cgtccggacg acggcgtcca gcgagtcgcc
     2521 gagcacgagc acgcgcgaga agtcgcggta tcggccgtag gaatgaaaga agcccaacgg
     2581 cccggggcgc gtcagccggc cgagcaggat gtcgacgatc ccgatgtagt ggaaggcata
     2641 gaaggcgttg agcgtctgga agcgcggcag gtcgctctcg atgatcccgc gcgggagcga
     2701 tccgtgcttg ccccactgca cgtcgattgc cggcgtgctt cgccacggcg tgtgcagcgt
     2761 tttcccgtgc cagtacgtcc acagatcagt cggtgcgccg ctcgggtcgt agcctaccca
     2821 gacgacctcc tggtcggtcg gcaccgtgaa ggggatccag gagccgtgga tgtcgtcccg
     2881 ccacaagagg tggtaggcga tgatcgggcg ggtcggatgg acgacggcca cggcgcggtc
     2941 gagagggaac cactcgtcgc gctgaaggta caagaccggt gcgagccgcc gagcgagcct
     3001 ggccaggctg tcggtggggg cgagcgcgtt ggccagcgcg acgggccggg ggggaatgtg
     3061 cgcgtgaggt ccacacgcgg a
//
LOCUS       DASSYW010000860         2341 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_966181, whole genome shotgun sequence.
ACCESSION   DASSYW010000860 DASSYW010000000
VERSION     DASSYW010000860.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2341)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2341)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2341
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_966181"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..687)
                     /locus_tag="VFN38_13675"
     CDS             complement(<1..687)
                     /locus_tag="VFN38_13675"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /protein_id="HET9012868.1"
                     /translation="MRRARTSRERYRSFVKDYRAGRLDEQTQARADGTLPVPAETPAQ
                     PAVPTGSAISRVFGGTRRAYAREYLRWLWPHRYAAAVVFLLALVVAGLEMVQPLFMRA
                     IIDGVLLDTSLDAAGRLQRLNVIGGLFVLLVMGEQVLNVTKNYRQKLLNTHVMLSLRR
                     ALFHRLLHLPLPRLWDMKTGGILSRITGDVDTTTGLLQMAVVSPAISLIRLLIAIVIL
                     FSLNWQLALTA"
     gene            complement(691..1176)
                     /locus_tag="VFN38_13680"
     CDS             complement(691..1176)
                     /locus_tag="VFN38_13680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6644 family protein"
                     /protein_id="HET9012869.1"
                     /translation="MTDFLAWLESSMLGHAMRDSGVWTYGVVNLFHILGISTLFGAVL
                     VLDLRMLGLWRTVPLASIAGPTVPLATTGFVMAAVSGIGLLATKATEYGGNPFLLIKF
                     PAIAVALLNVAVVTSRPAWKSMGRREPTAGDRRTLAIGGAVSLAAWLTAIGAGRMIGY
                     W"
     gene            complement(1199..1570)
                     /locus_tag="VFN38_13685"
     CDS             complement(1199..1570)
                     /locus_tag="VFN38_13685"
                     /inference="COORDINATES: protein motif:HMM:NF039360.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HET9012870.1"
                     /translation="MKTRRTVSMTLAAFVMAVLPVAAHHGWSGNSQEEFELSGTVEQV
                     VSLAGPHATMKVRAQGQLWDVTLAPPARTQAAGLNEKAIPVGAQVKIHGHRSSDPKRF
                     EVKTERVTWNGKTFNVYPDRD"
     gene            1707..>2341
                     /locus_tag="VFN38_13690"
     CDS             1707..>2341
                     /locus_tag="VFN38_13690"
                     /inference="COORDINATES: protein motif:HMM:NF024743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4097 family beta strand repeat-containing
                     protein"
                     /protein_id="HET9012871.1"
                     /translation="MTAPTRLFALLLPAALASSACEIGIAADAAEGSFQRDLTVSGPA
                     ELNVASGSGDIVVRTGPEGTIRVHARVRARSGPFISLGGESAEQRIRSIERDPPIEQS
                     GNRIRVGPRDWNEGWNGISISYEITVPASTRLEARSGSGDLDVSEVAGPVEASTGSGN
                     IRVGRVKGSVAVRTGSGDIDLAGAGAARASTGSGNITAMGIRGDLEARTGSG"
BASE COUNT          392 a          798 c          824 g          327 t
ORIGIN      
        1 cgcggtcagc gccagctgcc agttgagcga gaacaggatg acgatggcga tgagcagccg
       61 gatcagcgag atcgccggcg agacgaccgc catctgcagc agcccggtcg tcgtgtccac
      121 gtcgccagtg atgcgcgaca ggattccacc ggtcttcatg tcccacaggc gcggcagcgg
      181 caggtgcagc agccggtgga agagcgcgcg gcgcaacgac agcatgacgt gcgtgttgag
      241 cagcttctgg cggtagttct tggtgacgtt gagcacctgc tcgcccatca cgagcagcac
      301 gaacaggccg ccgatcacat tcaggcgctg gagccgcccg gcggcatcga gcgaggtgtc
      361 gagcaggacg ccgtcgatga tggcgcgcat gaagagcggc tgcaccatct cgagcccggc
      421 gacgacgagc gccaggagaa agacgacggc ggcggcgtag cgatgcggcc agagccagcg
      481 cagatactcg cgggcgtacg cccgccgcgt gccgccgaag acgcggctga tggcggagcc
      541 cgtcgggacc gcgggttggg cgggcgtctc ggccggcacc ggcagcgtgc catcggcgcg
      601 tgcctgtgtc tgctcgtcga gccgcccggc gcgatagtcc ttgacgaagc tgcggtagcg
      661 ttcgcgggag gtgcgtgcgc gacgcacgct ctaccaatac ccgatcatgc gcccggcgcc
      721 aatcgccgtc agccaggccg caagcgacac ggcgccgccg atggcgagcg tccggcgatc
      781 gcccgccgtc ggctcgcggc ggcccatcga cttccacgcc gggcgcgacg tgacgacggc
      841 gacgttcagg agcgccacgg cgatggccgg gaatttgatg agcaggaacg gattcccccc
      901 gtactcggtg gccttggtgg cgagcagccc gatgccggac accgccgcca tcacgaaacc
      961 ggtcgtggcc agcggcacgg tgggcccggc gatcgacgcg agcggcacgg tgcgccagag
     1021 cccgagcatg cgcaggtcca gcacgagcac cgcgccgaag agcgtcgaga tgccgaggat
     1081 gtgaaagagg ttgacgacgc cgtaggtcca gacgccggaa tcgcgcatgg cgtggccgag
     1141 catcgagctc tcgagccacg ccaggaagtc ggtcacgccg ccgcccgaac cggcgccgct
     1201 agtcccgatc cggatacacg ttgaacgtct tgccgttcca cgtgacccgc tcggtcttca
     1261 cctcgaagcg cttcggatcg ctgctgcggt ggccgtggat cttcacctgc gcgcccaccg
     1321 gaatggcctt ctcgttcagc cccgcggcct gcgtccgcgc gggcggcgcc agggtgacat
     1381 cccacagctg cccctgcgca cggactttca tcgtggcgtg cggaccggcc aggctgacca
     1441 cctgctcgac cgttccggaa agctcgaact cttcctggct gttgccgctc catccgtggt
     1501 gcgccgccac cgggaggacg gccatcacga acgccgcaag cgtcatcgat accgtacgtc
     1561 gggtcttcat gaattcctcc tgtcgagggt gggggtcacg actccagcgg tcagtctacc
     1621 ccgcccggga tacagttatg cctcaaccgc taggacgcaa cttcaacccg gggtggcccg
     1681 tctaaggctg tcagtcagga ggcttcatga ccgctcccac ccgtctgttc gcgcttctgc
     1741 tcccggccgc gctggccagt tcggcctgcg aaatcggtat cgcggcggat gctgccgagg
     1801 gcagcttcca acgggatctc acggtgtccg gaccggccga gctcaacgtc gcgagcggct
     1861 caggcgacat tgtggtccgc accggccccg aggggacgat acgcgtccac gcacgggtgc
     1921 gcgcgcgctc gggcccgttc atcagcctcg gcggcgaaag cgccgagcag cgcatccgca
     1981 gcatcgaaag ggacccgccc atcgaacagt cgggcaaccg gatccgcgtg gggccgaggg
     2041 actggaacga gggatggaac ggcatctcga tcagctacga gatcaccgta cccgccagca
     2101 cacggctcga ggccaggagc ggctcaggcg atctggacgt gtcggaagtg gccggcccgg
     2161 tcgaggcgtc caccggctcg ggcaacatcc gggtgggccg cgtgaaaggc agcgtggcgg
     2221 tgcggaccgg ttcgggcgac atcgatctcg ccggcgcggg cgcggcgcgg gcatccaccg
     2281 gcagcggcaa catcacggcg atgggcatcc gcggcgacct cgaggcgcgc acgggcagcg
     2341 g
//
LOCUS       DASSYW010000861         2144 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_888425, whole genome shotgun sequence.
ACCESSION   DASSYW010000861 DASSYW010000000
VERSION     DASSYW010000861.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2144)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2144)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2144
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_888425"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(124..1161)
                     /locus_tag="VFN38_13695"
     CDS             complement(124..1161)
                     /locus_tag="VFN38_13695"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HET9012872.1"
                     /translation="MTNPSYPGDPADVTALAEWLMATDSTSGGESPLTRAFGDALAAR
                     GWALTRIPAPHGRENLLATTGPGPYVTLSTHLDTVPPFIPPRRDERRLWGRGACDAKG
                     IAAAMVCAGERLRAAGLPVALLFVVGEETTHDGAHAANDWALAHGFRSRALVNGEPTE
                     STLALGTKGALRVVVRTHGEAAHSAYPHLGQSATRSLVHLLAELDSLALPSDPLLGET
                     TINIGRLAGGVADNVLAPSAEARLMARLVTDADDVWTLLQRWSAGRATLERGIEAPPV
                     RLATVPGYPTSVVAFATDIPAMPAWGTPYLFGPGSIHVAHRDDEHVEIAELESAVETY
                     ERLVRTVATTP"
     gene            1338..>2144
                     /locus_tag="VFN38_13700"
     CDS             1338..>2144
                     /locus_tag="VFN38_13700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aconitase family protein"
                     /protein_id="HET9012873.1"
                     /translation="MSSVNSFGSRATLDVAGAAYTIYRLDALSKASKGNTDRLPFSLK
                     ILLENLLRNEDDAFVKKADIEAMANWDVQGKAEKEIAFRTARVLLQDFTGVPAVVDLA
                     AMRDALAALGGDPQRINPLQPVDLVIDHSVQVDEYGSDAAFLINTDLEFERNVERYVF
                     LRWGQDAFRNFRVVPPGTGICHQVNLEYLGKTVFVNEETGEAYCDSLVGTDSHTTMIN
                     GLGVLGWGVGGIEAEAAMLGQPVSMLIPEVVGFKLHGKLPAGSTATDLVLT"
BASE COUNT          320 a          762 c          759 g          303 t
ORIGIN      
        1 ccgccatcac ggccacgaac atagaccgtc gcgcgtcaca ggccagcgcc accgcggagc
       61 agagccacga ccccacgccg agtggcgcgg gaggatagtc ggagcgtcgg gcgatccggc
      121 gtttcagggg gtcgtggcca cggttcgcac cagccgctcg tacgtctcca cggcggattc
      181 gagctccgcg atctccacat gctcgtcgtc gcgatgcgcg acgtggatcg agcccggccc
      241 gaacaggtac ggggtgcccc aggcgggcat ggcgggtatg tcggtggcga acgccaccac
      301 tgaggtggga tagcccggca cagtcgcgag cctgaccggc ggtgcctcga tgccgcgctc
      361 cagcgtcgcg cggccggcgc tccaacgctg cagcaacgtc cacacgtcgt cggcgtcggt
      421 caccagccgg gccatgagcc gcgcttccgc gctcggcgcc aggacgttgt ccgccacgcc
      481 ccccgccagg cgtccgatgt tgatcgtcgt ctcgcccagc agtggatcgc tcggcagcgc
      541 gagcgagtcg agctcggcga gcaggtgcac gagggagcgg gtcgccgact ggccgaggtg
      601 gggatacgcc gaatgtgccg cctcgccgtg cgtgcgcacg acgacgcgca gcgcgccctt
      661 cgtgcctagc gcgagggtgc tctccgtggg ctcgccgttg acgagcgcgc ggctgcggaa
      721 cccgtgggcc agcgcccagt cgttggcggc gtgcgcgccg tcgtgcgtcg tctcctcgcc
      781 gacgacgaac aggagggcca ccggaaggcc ggcggcccgc agccgctccc ccgcgcagac
      841 catcgcggcg gcgatcccct tcgcgtcgca ggcgccgcgc ccccacagcc gccgttcatc
      901 gcgccggggc gggatgaacg gcgggacggt gtcgagatgg gtggagaggg tgacgtacgg
      961 ccccgggccg gtggtggcca gcaggttctc gcggccgtgc ggtgcgggga tccgggtgag
     1021 cgcccagcca cgcgccgcga gcgcgtcgcc gaacgcgcgc gtcagcggcg actcgccgcc
     1081 gctcgtggaa tcggtggcca tgagccactc ggccagggcg gtgacgtcgg cggggtcgcc
     1141 aggatagctc gggttcgtca tccgggaacg gtcgtggccg tgcgccgcga ggtcaaccag
     1201 cgccggcgcg acaaacccgt gtagatttcc ccccagcctg ccggcgtgcc gcgaagcgct
     1261 cgcgccccgg cagtggctcc gttctccacc gttcgtcgtg ggcgaggacc gcgacggaca
     1321 ccgcgagacc ccgcactatg agctctgtca attcgttcgg cagccgcgcg actctcgacg
     1381 tcgcgggcgc ggcgtacacg atctaccgcc tcgacgcgct ctcgaaagcc tcgaagggca
     1441 acaccgaccg gcttccgttc agcctgaaga tcctcctcga gaacctcctc cgcaacgagg
     1501 acgacgcctt cgtgaagaag gcggacatcg aggcgatggc caactgggac gtgcagggca
     1561 aggccgagaa ggagatcgcc ttccgcaccg cacgcgtgct gctccaggac ttcaccggcg
     1621 tgcccgccgt ggtggatctc gccgcgatgc gcgacgcgct cgccgccctg ggtggcgatc
     1681 cgcagcgcat caacccgttg cagcccgtgg acctggtgat cgaccactcg gtgcaggtgg
     1741 acgagtacgg gtccgacgcc gcgttcctca tcaacaccga cctcgagttc gagcgcaacg
     1801 tcgagcgcta cgtcttcctg cgctggggac aggacgcctt ccggaacttc cgcgtcgtgc
     1861 ccccgggcac cgggatctgc caccaggtga acctcgagta cctgggcaag accgtgttcg
     1921 tgaacgagga gaccggcgaa gcgtattgcg attccctcgt cggcaccgac tcgcacacga
     1981 cgatgatcaa cggactcggc gtgctgggat ggggcgtcgg cggcatcgag gccgaggcgg
     2041 cgatgctcgg ccagcccgtg tcgatgctga tccccgaggt ggtcggcttc aagctgcacg
     2101 gcaagctgcc cgccggctcc acggccacgg atctcgtgct cacc
//
LOCUS       DASSYW010000862         2440 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1537308, whole genome shotgun sequence.
ACCESSION   DASSYW010000862 DASSYW010000000
VERSION     DASSYW010000862.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2440)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2440)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2440
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1537308"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            133..1233
                     /locus_tag="VFN38_13705"
     CDS             133..1233
                     /locus_tag="VFN38_13705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="YncE family protein"
                     /protein_id="HET9012874.1"
                     /translation="MRAVQPPTQDYLALVASESVDQIAVVRFGPRGIRIERTNTTGIM
                     PADVDGPHGVAVSPDGKFYYVTTAHGTPFGFLWKYALSNDSLAGRVMLGNFPATTQIT
                     PDGAFAYVVNFNLHGEMVPSSVSIVATDEMVEVARVPTCTMPHGSRINAQGTKQYSAC
                     MMDDIAVEIDTRAFTVARHFLVGKGKERGMQGAPSGASAGHASHDMAGHGMEPPKPGD
                     VSCSPTWVQPSPDGGRIFVACNKSNDIVEIDAKEWTLTRRIPAGDGVYNLAVTHDGKL
                     LVATNKRGKSTSVIDVATGAELARIPTTRRVVHGAAVSSDDRYAFISQEGVGSEPGTV
                     DVIDLRALQKVATIDLGQQAGGIDFWRVAPSR"
     gene            1311..1964
                     /locus_tag="VFN38_13710"
     CDS             1311..1964
                     /locus_tag="VFN38_13710"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0070007 - glutamic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family glutamic-type intramembrane
                     protease"
                     /protein_id="HET9012875.1"
                     /translation="MLYELLEAVAPVRASGGVVRNGADVVLTGLFSWMLGPRGPLVFM
                     ALVIGGAVWLIVRDRRGGPVRASTLAAMLGEAVVLALLFGIVVGTVTTQLVRPLRALA
                     ASGGLDGNVLARLTLSLGAGLYEELLFRVVIVALLANGFRLLFGVSRVAAGVGATVIG
                     ALLFSAFHYVGPLGEPMRLESFVFRALAGLAFSGLYLTRGFGITAWTHALYDVAVLL"
     gene            2047..>2440
                     /locus_tag="VFN38_13715"
     CDS             2047..>2440
                     /locus_tag="VFN38_13715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HET9012876.1"
                     /translation="MPFANFKLHPDLLRGVRELGFTRATPIQEQAIPPALEGRDLLAC
                     AMTGSGKTAAFLLPIMHRLMGKPRGTTRALVLTPTRELAAQIEEHLRELAVHTPLSGA
                     AVFGGVGMGPQEHAFRSGVDVIIATPGRL"
BASE COUNT          351 a          823 c          876 g          390 t
ORIGIN      
        1 cctgacgacc atcctccgat gtccacccga ttcgtgcgag gccgcgtcgg cgctctcgcc
       61 tttctcggcg cctgcgcagc gcagacacac gcgccgtcag cggcgaccac cgcgcagcag
      121 ggagcggcgg cgatgcgcgc cgttcagccg ccgacgcagg actacctcgc gctcgtcgcg
      181 tcggagtcgg tggaccagat cgccgtcgtg cggttcggtc cacggggcat ccggatcgag
      241 cgaacgaaca cgaccggcat catgcccgcc gacgtcgatg ggccgcatgg cgtcgcggtc
      301 tcacccgatg gaaagttcta ctacgtgacc actgcgcacg gcacaccgtt cggctttctg
      361 tggaagtacg cgctgtcgaa cgattcgctg gcgggccgcg tgatgctcgg caactttccc
      421 gcgaccacgc agatcacccc ggacggcgcc ttcgcctacg tcgtcaactt caatctccac
      481 ggcgagatgg tgccgtcgag cgtctcgatc gtggcgacgg acgagatggt ggaggtggcg
      541 cgcgtgccga cgtgcacgat gccgcacggc tcccgcatca acgcgcaggg gacgaagcag
      601 tattcggcct gcatgatgga cgatatcgcg gtggagatcg acacgcgggc gttcaccgtc
      661 gcgcgccatt tcctcgtcgg aaagggcaag gagcgcggca tgcagggcgc cccgtccggc
      721 gcgagcgccg gccatgcgtc gcacgacatg gcgggccacg gcatggagcc gccgaagccg
      781 ggagacgtga gctgctcccc gacgtgggtg caaccgtccc ccgacggcgg gcgcatcttc
      841 gtcgcctgca acaagagcaa cgacatcgtg gagatcgacg cgaaggagtg gacgctcacg
      901 cggcgcatcc cggctggcga tggggtgtac aacctcgccg tgacccacga cggcaagctg
      961 ctcgtcgcga cgaacaagcg cggcaagtcc accagcgtga tcgatgtggc cacgggcgcc
     1021 gagctggcgc ggatcccgac gacgaggcga gtggtgcacg gcgcggccgt atcgagtgac
     1081 gaccggtatg cgttcatctc gcaggaggga gtcgggtccg agccgggcac ggtggacgtg
     1141 atcgatctgc gcgcgctgca gaaggtggcg acgatcgacc tcggtcagca ggcgggcggc
     1201 atcgacttct ggagggtggc cccatcgcgg tagcacgtct gcaggcgaag gagtactggg
     1261 cggcgagcaa gtcgcaccga cacagcctcc tcttcgcgct tccgctgctc gtgttgtacg
     1321 agctgctcga ggcggtcgcg ccagtgcgag cgtcgggcgg cgtcgtgcgc aacggtgccg
     1381 atgtcgtgtt gacgggcctg ttctcgtgga tgctcggccc gcgcggcccg ctcgtgttca
     1441 tggccctggt gatcggtggg gcggtgtggc tgatcgtccg cgatcgccgc gggggaccgg
     1501 ttcgcgccag cacgctcgcg gcgatgctcg gcgaggcggt ggtgctcgcg ctgctgttcg
     1561 gcatcgtcgt cggcacggtg acgacgcagc tcgtgcggcc gctgcgcgcg ctcgccgcca
     1621 gtggagggct cgacggcaac gtcctggcgc ggctcacact gtcgctcggg gcagggctgt
     1681 acgaggagct gctgttccgg gtcgtgatcg tcgcgctcct ggccaacggg ttccggctgc
     1741 tgttcggcgt gagccgagtg gcggcggggg tcggcgcgac ggtgatcggc gccctcctct
     1801 tctccgcatt ccactacgtg gggccgctgg gcgagccgat gcgactggag tcgttcgtgt
     1861 tccgtgcgct cgcgggattg gcgttcagcg ggctgtacct gacgcgagga ttcggcatca
     1921 ccgcctggac gcacgccctc tacgacgtcg cggtcctgct ctagcgatct gggccccgcg
     1981 gtgccccccg gtaccccggc gggctaactt gcgcgccagt ccgcacgcgt catcagccac
     2041 ctgccaatgc ctttcgcgaa tttcaagctg caccccgacc tcctgcgcgg agtgcgggag
     2101 ctcgggttca cccgggccac gcccatccag gagcaggcca tcccgccggc actggagggt
     2161 cgcgatctcc tggcgtgcgc catgaccggg agcggcaaga cggccgcgtt cctcctgccc
     2221 atcatgcacc ggctgatggg caagccacgc gggacgacgc gggcgctcgt tctcacgccg
     2281 acccgcgagc tggccgcgca gatcgaagag catcttcgcg agctcgccgt gcacacgccg
     2341 ctgtcaggcg ccgcggtgtt cggcggggtc gggatgggtc cacaggagca cgcgttccgc
     2401 agcggggtgg acgtgatcat cgccaccccg ggacggctgc
//
LOCUS       DASSYW010000863         2822 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_460927, whole genome shotgun sequence.
ACCESSION   DASSYW010000863 DASSYW010000000
VERSION     DASSYW010000863.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2822)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2822)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2822
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_460927"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            130..636
                     /locus_tag="VFN38_13720"
     CDS             130..636
                     /locus_tag="VFN38_13720"
                     /inference="COORDINATES: protein motif:HMM:NF015506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0031992 - energy transducer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HET9012877.1"
                     /translation="MRAIARAGYIGIMPLPFRRRFLSLLLATASAAACTDHETSQKVA
                     QAFQTGSTAPDEVPRMLNSDLPFRYPAALYARKIQGNVTLRLRIDRDGQVAADSTRIE
                     ESSGYAALDSAAVKGSQELHFIPAKLRGEPMPVTILFPVYFRHPDAHALPGDTILKRG
                     ATTSQDKP"
     gene            633..2054
                     /locus_tag="VFN38_13725"
     CDS             633..2054
                     /locus_tag="VFN38_13725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HET9012878.1"
                     /translation="MSAPASPAAGMMRNARPYENVRETIGWTPHIRLNRVTRGTRTPV
                     YGKAEFFNPGGSVKDRIGLPIIERAEREGHLKPGGTIVEGTSGNTGVGLAIAAALKGY
                     KCIFTMPDKMSQEKVRLLKAFGAEVIVTPTAVAPDHPDNYVMMAKRIAEETPNAILAN
                     QFYNDANPDAHYATTGPELWEQSEGRITHFVAAAGTGGTITGVGRYLKERNPKIQIIA
                     GDPQGSILAELWRSKGKHKVDGAPYKVEGIGQDKLPGTLDLSLVDEYRTVSDRDSFAM
                     ARRLTREEGLFVGGSAGLIAHLALQVAREIDDPDAFVVTFLCDTGERYLSKLFNDEWM
                     RENQLLEPDRVTLGDLLDHKGDGAPATLVSAAPGQLVRQALGLMRLHDVSQLPVLDNG
                     ECVGSVTEYALTQRGLESSRFLDAVVGEVMDEAFPVVDAGQHVESVQKLLSKATPAVL
                     VREAGTIQGIVTRSDMLAYLMAR"
     gene            2085..>2822
                     /locus_tag="VFN38_13730"
     CDS             2085..>2822
                     /locus_tag="VFN38_13730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HET9012879.1"
                     /translation="MRITVLMGGTSSERDVSLASGLRIAEALRSRGHAVKTVDTAKGP
                     VSEAEERRMLAGGVVKTAPPTPEELARMKAESVTDTAARLPKRGDCDVAFLALHGGSG
                     EDGTIQALLDLAGVPYTGSGHLASALAMDKDLSKHLLRAHGVRTADWLMALDPAQPPT
                     TGEVERALGWPVIVKPSKQGSTVGLSIVKQPQELHPAIAEAFKHDDEVMIERFIAGRE
                     LSAPVIGGEALPVGEIIPKHEIYDYECK"
BASE COUNT          472 a          929 c         1016 g          405 t
ORIGIN      
        1 gcatgacgtc gtcgtccggc tgcagcgcgt cgacgtcgat acgctcacgc cgctcgccgc
       61 actgcagctg ctggccgagc ttgccgagcg tgcgcgcacg tgatgggcgc tccgaaggga
      121 gacctcccga tgcgcgcgat cgcccgcgcg ggctacattg ggatcatgcc gctcccgttc
      181 cgccgccgct tcctttccct gctgctcgcg accgccagtg ccgccgcgtg cacggaccac
      241 gagacgtcgc agaaagtcgc gcaggcgttc cagaccggga gcaccgcgcc cgacgaagtt
      301 ccccgcatgc tcaactccga cctgccgttc cggtatccgg cggcgttgta cgcgcggaag
      361 atccagggca acgtgacact gcggctgcgc atcgatcgcg atgggcaggt cgcggccgat
      421 tccacgcgca tcgaggagtc gagcggctat gcggcgctcg attccgccgc cgtgaagggc
      481 tcccaggagc tccacttcat tcccgccaag ctgcgtggtg agccgatgcc ggtgacgatc
      541 ctctttcccg tgtacttccg tcatccggat gcgcatgcgc tgccgggcga cacgatcctc
      601 aagcgcggcg cgacgacgtc gcaggacaag ccatgagcgc gcccgcatca ccggcggccg
      661 gcatgatgcg caatgcccgc ccctacgaga acgtgcggga gacgatcggc tggacgccgc
      721 acatccggct caaccgcgtg acgcgcggaa cgcggacgcc cgtgtacggc aaggcggagt
      781 tcttcaatcc gggcgggtcg gtgaaggatc gcatcgggct gccgatcatc gagcgcgccg
      841 agcgcgaggg gcatctcaag cccggcggca cgatcgtcga ggggacgagc ggcaatacgg
      901 gtgtcgggct cgcgatcgcc gcggcgctga agggctacaa gtgcatcttc acgatgccgg
      961 acaagatgtc gcaggagaag gtgcgcctgt tgaaggcgtt cggggccgag gtgatcgtca
     1021 ccccgaccgc ggtggcgccc gaccatccgg acaactacgt gatgatggcg aagcgcatcg
     1081 ccgaggagac gccgaacgcg atcctggcga accagttcta caacgacgcg aacccggacg
     1141 cgcactacgc cacgacgggg ccagagctgt gggagcagag cgagggacgc atcacgcact
     1201 tcgtcgccgc ggcggggacc ggtggcacga tcacgggcgt gggccgctac ctgaaggagc
     1261 ggaaccccaa gatccagatc atcgccggcg atccgcaggg gtcgattctc gcggagctct
     1321 ggcgcagcaa ggggaagcac aaggtcgacg gggcgccata caaggtggag ggcatcgggc
     1381 aggacaagct gccggggacg ctcgaccttt cgctcgtgga cgagtaccgc acggtgagcg
     1441 accgcgactc gttcgcgatg gcgcggcgcc tgacgcgcga ggaggggctg ttcgtcggcg
     1501 gctcggcggg actcatcgcg cacctcgcgc tgcaggtcgc gcgcgaaatc gacgatccgg
     1561 atgcgttcgt cgtgaccttt ctgtgcgaca ccggtgaacg ctacctctcc aagctgttca
     1621 acgacgagtg gatgcgggag aaccagctgc tcgagccgga tcgcgtgacg ctcggtgacc
     1681 tgctcgatca caagggcgac ggcgcgccgg cgaccctggt gagtgcggcg cccggccagc
     1741 tcgtgcggca ggcgctggga ctgatgcggc tgcacgacgt ctcccagctg cccgtgctgg
     1801 acaacggcga gtgcgtgggc agcgtcaccg aatacgcgct cacgcaacgc ggactcgaga
     1861 gctcgcgctt tctcgacgcc gtcgtcggcg aggtgatgga cgaggcgttt ccggtcgtgg
     1921 acgcgggtca gcacgtcgag tcggtccaga agctgctatc gaaggcgacg ccggcggtgc
     1981 tggtgcgcga ggcggggacg atccagggaa tcgtcacgcg cagcgacatg ctggcgtatc
     2041 tcatggcgcg ctgacgcgcg ttcttcacgt tctttccagg tccgatgcgc atcacggttc
     2101 tcatgggcgg cacctcttcc gagcgcgacg tgtcgctcgc ctccggactg cggatcgccg
     2161 aggcgctgcg ctcgcgcgga catgcggtga agaccgtgga cacggcgaag gggccggtga
     2221 gcgaggcgga ggagcgccgg atgctcgccg ggggcgtggt aaagaccgct cccccgacgc
     2281 ccgaggagct ggcccgaatg aaggcggagt cggtcaccga cacggcggca cggctgccga
     2341 agcgcgggga ctgcgacgtc gcctttctgg cgctgcacgg cggcagcggc gaggacggta
     2401 cgatccaggc gctcctcgac ctggccggcg tgccctatac cggcagcggc cacctggcca
     2461 gcgcgctcgc catggacaag gacctgtcca agcacctgct gcgcgcgcac ggcgtgcgca
     2521 cggcggactg gctcatggcg ctggatcccg cgcagccgcc cacgaccggc gaggtggagc
     2581 gcgcgctggg gtggcccgtc atcgtcaagc cgtcgaagca gggctccacg gtggggctgt
     2641 ccatcgtgaa gcagccgcag gagctgcacc cggcgatcgc ggaagcgttc aagcacgacg
     2701 acgaggtgat gatcgagcgg ttcatcgccg ggcgcgagct gagcgcgccc gtcatcggcg
     2761 gcgaggcgct gccggtgggc gagatcatcc cgaagcacga gatctacgac tacgagtgca
     2821 ag
//
LOCUS       DASSYW010000864         3221 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_271798, whole genome shotgun sequence.
ACCESSION   DASSYW010000864 DASSYW010000000
VERSION     DASSYW010000864.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3221)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3221)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3221
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_271798"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1091)
                     /locus_tag="VFN38_13735"
     CDS             complement(<1..1091)
                     /locus_tag="VFN38_13735"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HET9012880.1"
                     /translation="MRTIAERRGATAVPPTMASPLAAADTPPAARDPFDADWARSLER
                     SVLAPMGESYFRCELIGGERIPPRGPLILAANHSGNAFPYDGIVLDGLLWRRDGMRDE
                     TKFRAVYEAELSLRWWMRPYGIPDFWRRGGGVDMTFDNFDRLLARGDRVLYFPEGVPG
                     IGKGFNRRYQLQRFSSSFVLLAARHHVPVLPLYIINAEWLHPFGYCIPPLDRVMQRLF
                     LVPFLPLPIGVLAILMPWIWFLAFPAKLIFVVGDPIDVEGALREEGVTDYESPPRDSV
                     RRAAERVRVQMQRELTALVAVHGRTRYGVGSLLRALRRGRPHALHATPLGWPLAFLRH
                     ERDRRRPPARSRLHALLRDWDLVGFYLPFG"
     gene            1311..3044
                     /locus_tag="VFN38_13740"
     CDS             1311..3044
                     /locus_tag="VFN38_13740"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HET9012881.1"
                     /translation="MTEAPWFAHYDSGIPRTLAPYPAETLVDLVRRQARERPNAVALR
                     FEGAVTTYAQLLRQANAFGRALEARGLAPGDRVALVLPNCPQFLVAELGTWLAGGVVA
                     PVNPTYPDEELAGLLGRAGATIAVVLAPFYEHVKAIQGRTSVRHVIVAYVRNALAFPK
                     SLLFRLVRERHEGHGTPPRGDDEAMGDVLKTYAGQQPRAAPPGIADPALLLPSGGTTG
                     TPKLVVGTHGGLAISGRQLDNWLGGVLERGRDTLLVPLPLFHVYAAAGVQSLAYTAGL
                     SMALIPNPRDTAALLATIRRERPAFLVAVPTILAALARHADTPRTRDAFRAMKLVFSG
                     AAPLMEETSREFQSLTGGIIVEGYSLTEAQMAVTANPASGTKKIGSVGLPVPDVELRM
                     VDIETGTQPVPPGENGEVLMAAPQLMRGYWGQPEATAEALQRDETGRLWLHTGDVGFL
                     DAEGYLFLTARKKELIKVSGYQVWPREVEEVLATHPAIAEAGVAAIQDPVKGERPKAW
                     VVLRPGMEVSADDLRVFCAVHLAPYKVPAQVAIVRELPKSPIGKVLRRKLHELDVALP
                     REAGAVPAMHG"
BASE COUNT          467 a         1124 c         1225 g          405 t
ORIGIN      
        1 ccgaagggga ggtagaagcc gaccaggtcc cagtcgcgga ggagggcgtg gagacggctc
       61 cgcgccggcg ggcggcggcg gtcgcgctcg tgccggagga acgccagcgg ccagccgagc
      121 ggcgtggcgt ggagcgcgtg cggccggccg cggcgcagcg cgcgcagcag cgaacccacg
      181 ccgtagcgcg tgcgcccgtg aacggcgacc agcgccgtca gctcgcgctg catctgcacg
      241 cgcacgcgct cggcggcgcg gcgcacgctg tcgcgcggcg gcgactcgta gtcggtcacc
      301 ccttcctcgc gcagcgcgcc ctcgacgtcg atcgggtcgc cgacgacgaa gatcagcttc
      361 gccgggaagg cgaggaacca gatccagggc atcaggatgg cgagcacgcc gatcgggagc
      421 ggcaggaagg ggacgaggaa gagccgctgc atgacgcggt cgagcggcgg gatgcagtag
      481 ccgaaggggt gcagccactc ggcgttgatg atgtagagcg ggagcaccgg cacgtggtgc
      541 cgcgcggcga ggaggacgaa gctcgagctg aagcgctgca gctgatagcg gcggttgaac
      601 cccttgccga tccccggcac cccctcgggg aagtagagga cgcggtcccc gcgggcgagc
      661 aggcggtcga agttgtcgaa cgtcatgtcc acgccgccgc cgcgacgcca gaagtcgggg
      721 atgccgtacg gccgcatcca ccaccggagc gagagctcgg cctcgtagac ggcgcggaac
      781 ttcgtctcgt cgcgcatccc gtcgcggcgc cagagcaggc cgtcgagcac gatgccgtcg
      841 taggggaagg cgttgccgct gtggttggcg gcgaggatga gcgggccgcg cggcgggatg
      901 cgctcgccgc cgatcagctc gcagcggaag taggactccc ccatcggagc gagcacgctg
      961 cgctcgagcg agcgcgccca gtcggcgtcg aaggggtccc tggcggccgg cggcgtgtcc
     1021 gccgccgcga ggggggatgc catcgtgggg ggcacggccg tcgcgccgcg ccgctcggcg
     1081 atcgtacgca tcgatcctct cccgatccac gaggtcgaac aggacggcca gggagacgat
     1141 agggtgtgac tccggcagcc ggtgtcaggc aaatcggtag accggcagcg taggcgggta
     1201 gggcgggccg gcaccggatc gatcgcgccg ggcgatggcg gcctttgcct gacagcgcgt
     1261 gcaccacgcg ccgcgcatcg tggtgctcac gactccttcc aggaggaacg atgaccgaag
     1321 ctccgtggtt cgcgcattac gactcgggca tcccacggac gctcgctccg tatccggcgg
     1381 agacgctggt ggacctggtg cgacgccagg cgcgcgagcg cccgaacgcc gtggcgctcc
     1441 gcttcgaggg cgcggtgacc acctacgccc agttgctccg gcaggcgaac gcgttcggcc
     1501 gcgcgctcga ggcgcgggga ctggcgcccg gcgaccgcgt cgcgctggtt ctccccaact
     1561 gtccgcagtt cctcgtcgcc gagctcggga cctggctggc cggcggggtc gtcgcgccgg
     1621 tgaacccgac ctaccccgac gaggagctcg ccggcctgct cggccgcgcc ggcgcgacga
     1681 tcgccgtcgt cctcgccccg ttctacgagc acgtgaaggc gatccagggg cgcaccagcg
     1741 tgcggcacgt catcgtggcc tacgtgcgca acgcgctcgc cttccccaag tcactgctct
     1801 tccgcctcgt gcgcgagcgg cacgaaggac atggcacgcc gccgcggggc gacgacgagg
     1861 cgatgggcga cgtgctgaag acgtacgccg gccagcagcc gcgcgccgcg ccgccgggca
     1921 tcgccgatcc cgcgctcctc ctgccgagcg gcggcacgac gggcacgccc aagctcgtgg
     1981 tggggacgca cggcggcctc gccatctccg gccggcagct cgacaactgg ctcggcggcg
     2041 tcctggagcg cgggcgcgac acgctgctcg tgccgctccc cctcttccac gtctacgccg
     2101 cggccggcgt ccagtcgctc gcctacacgg ccggcctctc gatggcgctc atcccgaacc
     2161 cgcgcgacac ggcggcgttg ctcgccacga tccgtcgcga gcggccggcg ttcctcgtcg
     2221 ccgtgccgac gatcctcgcc gcgctcgccc ggcacgccga cacgccgcgc acccgcgacg
     2281 cgttccgcgc gatgaagctg gtgttctccg gcgcggcgcc gctgatggag gagacgagcc
     2341 gcgagttcca gtcgctcacc ggcggcatca tcgtcgaggg ctactcgctc accgaagcgc
     2401 agatggccgt caccgcgaac ccggccagcg gcacgaagaa gatcggcagc gtcggcctcc
     2461 ccgtgcccga cgtcgagctg cgcatggtgg acatcgagac cggcacgcag ccggtgccgc
     2521 cgggcgagaa cggcgaggtg ctgatggccg cgccgcagct catgcgcggc tactgggggc
     2581 agccggaggc gacggccgag gcgctgcagc gcgacgagac ggggcggctc tggctgcaca
     2641 ccggcgacgt cggctttctc gacgccgagg gctacctctt cctcacggcg cgcaagaagg
     2701 agctgatcaa ggtctccggc taccaggtct ggccgcgcga ggtggaggag gtgctggcga
     2761 cgcatccggc gatcgccgag gcgggagtgg cggcgatcca ggatcccgtg aagggagagc
     2821 ggccgaaggc gtgggtggtg ctgcgcccgg ggatggaggt ctcggccgac gatctgcgcg
     2881 tcttctgcgc ggtgcacctc gcgccgtaca aggtgccggc gcaggtcgcg atcgtgcgcg
     2941 agctgccgaa gtcaccgatc ggcaaggtgc tgcgccggaa gctgcacgag ctcgacgtcg
     3001 cgttgccgcg ggaggcgggc gccgtgccgg cgatgcacgg ctgacgggca accgagggcg
     3061 ggcatcggga ttgatccgcc ctgggtccct gggaccgggg cggggcgggc atctcgacag
     3121 gtccgccccg gggacctggg acctggaact actacgcatc gcgacgtcgc tggctcaggg
     3181 acccgggact ggggaccggc ccgccgcgca tcatgatgcg t
//
LOCUS       DASSYW010000865         2790 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_947965, whole genome shotgun sequence.
ACCESSION   DASSYW010000865 DASSYW010000000
VERSION     DASSYW010000865.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2790)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2790)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2790
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_947965"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..284)
                     /locus_tag="VFN38_13745"
     CDS             complement(<1..284)
                     /locus_tag="VFN38_13745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012882.1"
                     /translation="MAGTGEHREAFTASLAALQAEIAATEARGAPVPAEAHEMVTRLR
                     EVVAALDGLTASIGGGLTVPMARGGDEAPRESDAERADRAADARVDEASD"
     gene            complement(411..1532)
                     /locus_tag="VFN38_13750"
     CDS             complement(411..1532)
                     /locus_tag="VFN38_13750"
                     /inference="COORDINATES: protein motif:HMM:NF025382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4232 domain-containing protein"
                     /protein_id="HET9012883.1"
                     /translation="MAHLPTLSARFTSLARLGAIVLLAGAAGCEAWRARKVPDCRAAA
                     LVPRVASTDAGEGNRAITVALRNSGPAPCRLDGYPAVVLLDSAGAPIDQVQVVQSEGT
                     YFEAPASPGRVIVAPGGEGSFQLAFHGPAAGACVHAARLGVSPPGDSAGTLVVTAPLE
                     ACGPRLRVAPVRNGAPEGPLAGPGVRLYLVTPGGVLAVVRPNTTEESLLEAYGAGRVR
                     PARLSLADGDSAPGTVLFPEDSLRRLEIVWADTARRRLPRVARFAGQRSDWMVGRGLT
                     LGISLRELERLNGGPFSLAGFEWAGEGFVMSWRGGASHRPPPGAQRVLARLRPRRGSA
                     DSADAPLVHQLLGDGPFSSADARMRRLNPRVDEVAVRYR"
     gene            complement(1626..1862)
                     /locus_tag="VFN38_13755"
     CDS             complement(1626..1862)
                     /locus_tag="VFN38_13755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012884.1"
                     /translation="MRFRASGPRLYLFQMVLGVVVLDAIALAAYRFTSLREAGPNTRL
                     VFTVLWTIATAVVVGIGLRRIRLARSGSPGAPRR"
     gene            complement(1897..2595)
                     /locus_tag="VFN38_13760"
     CDS             complement(1897..2595)
                     /locus_tag="VFN38_13760"
                     /inference="COORDINATES: protein motif:HMM:TIGR01065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin III family protein"
                     /protein_id="HET9012885.1"
                     /translation="MSGSGSGGRSGTTAAGGTAVREPVNGWLHLGGALLALVGLVVLT
                     VAAQARDSWRHTLGAVVFGCSALLMFGASALYHLAPRSRRSGVYRRLDHSMIYVFIAG
                     TYTPVCLIALQGTSLGLALLAVVWTLAIAGVAQKTFWMRAPRGLSTAIYLGLGWIGAV
                     AAPTLLRAAPTPLFGWLLAGGIVYTIGALFYWRRWPRGRPGIFGFHELWHVCVLAASA
                     THYWAVLSYLVLPR"
BASE COUNT          392 a         1027 c         1070 g          301 t
ORIGIN      
        1 tcgtcggacg cttcgtccac gcgagcgtcg gcggccctgt cggcgcgctc ggcgtcgctc
       61 tcacgtggcg cctcgtcccc cccgcgcgcc atcggcaccg tcagcccccc gccgatgctc
      121 gccgtcagcc cgtcgagcgc cgccaccacc tcgcgcaggc gggtgaccat ctcgtgcgcc
      181 tcggcgggca ccggtgcgcc gcgtgcctcg gtcgccgcga tctccgcctg cagtgccgcg
      241 agcgacgcgg tgaaggcttc tctatgttcg ccggttccgg ccatgtcgcg ctcctcgcaa
      301 tggacgacgg gcttcccgct cgagcgcgcg gatgcgccgc ggcgagcccc tccaggtaat
      361 ctgcctccac aacggctgcc gggagtaggg gcggtcgttc ccccgtcccg ctaccggtag
      421 cgaaccgcca cctcgtccac ccggggattc agccgccgca tgcgcgcgtc ggccgacgag
      481 aagggaccgt cgccgagcag ttggtggacg agcggggcgt cggcggagtc ggcgctgccg
      541 cggcgggggc gcaggcgcgc cagcacgcgt tgcgcgccgg gaggcgggcg atgggaggcg
      601 ccgccgcgcc acgacatcac gaatccctcc cccgcccatt cgaagccggc gagcgagaag
      661 gggccgccgt tcagccgctc cagctcgcgc agcgagatgc cgagcgtgag gccccgtccc
      721 accatccagt cgctccgctg cccggcgaag cgggcgacgc gcggcagacg ccgccgtgcg
      781 gtgtcggccc agacgatctc gagccggcgc agcgaatcct ccgggaagag cacggtgccc
      841 ggcgcgctgt cgccgtcggc gagggagagg cgggcggggc gcacgcggcc agcgccgtag
      901 gcctcgagaa gcgactcctc ggtcgtgttc ggcctcacga cggcgagcac gccgccgggc
      961 gtgacgaggt agagccgcac gccgggaccg gcgagcggtc cctcgggcgc gccgttccgc
     1021 accggcgcga cgcgcagacg ggggccgcag gcctcgagcg gcgccgtcac gacgagggtg
     1081 cccgcgctgt cgcccggcgg agagacgccg agccgcgccg cgtggacgca cgcccccgcc
     1141 gccggtccgt ggaaggcgag ctggaaggat ccctcgcccc cgggggcgac gatcacgcgt
     1201 cccggagacg ccggcgcctc gaagtaggtg ccttcggact ggacgacctg gacctggtcg
     1261 atcggggcgc cggccgagtc gaggagcacg accgccgggt agccgtcgag ccggcagggg
     1321 gcgggaccgg agttccgcag ggcgacggtg atcgcccggt tcccctcccc ggcgtcggtc
     1381 gaggcgacgc gcgggacgag cgccgccgcc cggcagtcgg gcaccttccg cgcgcgccac
     1441 gcctcgcagc cggccgcgcc ggcgaggagg acgatcgccc ccaggcgcgc gagcgacgtg
     1501 aagcgtgcgg agagggtcgg gaggtgcgcc atccggatcc ggtgaaagcg gtgagtcgcc
     1561 taacgaggat ggacgcggcg acgccgcgtc tggtcacggc cgcggcgcgg ccgcgccccc
     1621 tcggctcagc gccgcggtgc tccgggcgat ccgctccggg ccaggcggat gcggcgcagt
     1681 ccgatcccga cgacgaccgc ggtggcgatc gtccagagga cggtgaagac gagccgcgtg
     1741 ttcgggccgg cctcgcgcag gctggtgaag cggtaggccg cgagggcgat cgcgtcgagg
     1801 acgacgacgc cgagcaccat ctggaagagg tacagtcggg gccccgaggc gcggaatctc
     1861 atcggcgggc gggtgcggcg gcgcgcggcg accgcgctag cgcggcagca ccaggtacga
     1921 cagcaccgcc cagtagtggg tggcgctggc cgcgaggacg cagacgtgcc agagctcgtg
     1981 gaagccgaag atgcccggcc tgccgcgcgg ccagcgccgc cagtagaaga gcgcgccgat
     2041 cgtgtagacg atgccgccgg cgagcagcca gccgaagagg ggggtgggcg cggcgcgcag
     2101 cagcgtgggc gcggcgacgg cgccgatcca gccgagcccg aggtagatcg ccgtcgagag
     2161 gccgcgcggc gcgcgcatcc agaacgtctt ctgcgccacg ccggcgatcg ccagcgtcca
     2221 caccacggcc agcagcgcca ggccgagcga cgtcccctgg agcgcgatca ggcagaccgg
     2281 ggtgtaggtg ccggcgatga agacgtagat catcgagtga tcgagccggc gatacacacc
     2341 cgagcgccgg gagcgggggg cgaggtgata gagcgcgctg gcgccgaaca tcagcagcgc
     2401 gctgcagccg aagaccacgg cgccgagcgt gtgtcgccag gaatcgcgcg cctgcgcggc
     2461 gaccgtcaga acgacgagtc caacgagggc gagcaacgcg cccccgaggt ggagccagcc
     2521 attcacgggc tcgcgtaccg ccgtgccccc cgccgccgtc gtcccgctcc ggcccccact
     2581 tcccgatccg ctcatgccga aagatgtacg gacgtcgtgg gcgcggccag cggccccacg
     2641 gatgagtgtg aggccgctca cgttgccggg tcgcgggtac gctcgtcacc ggagtagcac
     2701 cgccagcgcg ggacggcgca tcccggccga cccgatgtcg gcgccccggg atgcgcgcgg
     2761 accctcgccg gcgtgccctc cccgcttccg
//
LOCUS       DASSYW010000866         2521 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1408384, whole genome shotgun sequence.
ACCESSION   DASSYW010000866 DASSYW010000000
VERSION     DASSYW010000866.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2521)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2521)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2521
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1408384"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..622)
                     /locus_tag="VFN38_13765"
     CDS             complement(<1..622)
                     /locus_tag="VFN38_13765"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HET9012886.1"
                     /translation="MIQLPILRWGQPYTSLEVDDVVHFSTGEPIAKVSRANGGLIGRD
                     MRKASRARAALREIPIPELIDRVAKAGELYMNGTIAMGDGAQTPEEFARAQSASTGLP
                     ERMCRANMKKNAFVLAEMRRILESLTRGLSLDVLSSGHGVERGVPISYQAQSPVLGLV
                     LPSNSPGVHTLWLPIIPMQIGLVLKPGPQEPWTPYRMAEAFFQAGIP"
     gene            complement(684..1793)
                     /locus_tag="VFN38_13770"
     CDS             complement(684..1793)
                     /locus_tag="VFN38_13770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012887.1"
                     /translation="MSQTSSPAVSPTALAAARERLDAHVREIVRWHFDPATGCPFWLE
                     RAKQLDFDPLADVNGYADLTKFGFFEDEWLRGGPVGRWVPKAYAGKPIYVFETGGSTG
                     VPKSRISHEDFRIDYSLFSDTLPAEKFPPGSDWLMVGPSGPRRLRLAIEHLAQHRGGM
                     CFMVDLDPRWVIKLIKKGWTEHLQAYKDHVIDQAVTILGAGHNIKCMFTTPKLLEALA
                     LRLEEMGTSLSKAGITGIFSGGTEFTPQWNRFAHEELLDGAYMTPTYGNTLMGLASSS
                     PSGPHNNYKITYYAPQPRAVTEVVDLDDPATVVGYGATGRVKLTTLTREFFMPGFLER
                     DEGEREPACDLYPWDGVSGVRPYRALAATTTVGVY"
     gene            complement(1809..>2521)
                     /locus_tag="VFN38_13775"
     CDS             complement(1809..>2521)
                     /locus_tag="VFN38_13775"
                     /EC_number="2.4.1.25"
                     /inference="COORDINATES: protein motif:HMM:NF014499.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004134 - 4-alpha-glucanotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="4-alpha-glucanotransferase"
                     /protein_id="HET9012888.1"
                     /translation="QRARRSADLYDGFRIDHLIGFFRTYVRKPDTEPGFWPAEERQQR
                     AMGEHLLTLFADSGASLIGEDLGTVPDFLRVSLAKRGIPGMKVMRWERDWHATGHPFL
                     DPATYASASVATSGTHDTESLAEWWDTAGEAERQALLALPPLAHAGIPFDAPYSDRVR
                     DALLETLFASGSRLLILPLQDIFGWRDRINVPAVVDDQNWTWRLPVPVDAFAATPEAL
                     ERARYLSAVSQESGRKGF"
BASE COUNT          399 a          844 c          866 g          412 t
ORIGIN      
        1 gcgggatgcc ggcctggaaa aaagcttccg ccatgcggta cggcgtccac ggctcctgcg
       61 gcccgggctt gagcacgagg ccgatctgca tcgggatgat cggcagccac agcgtgtgca
      121 cgccgggcga gttcgagggc agcacgaggc cgagcacggg gctctgcgcc tgatagctga
      181 tcggcacgcc gcgctcgacg ccgtggccgc tcgacaggac gtcgagcgac agcccgcgcg
      241 tcagcgactc gagaatgcgc cgcatctccg cgagcacgaa ggcgttcttc ttcatgttcg
      301 cgcggcacat gcgctcggga aggccggtgc ttgccgactg cgcgcgcgcg aactcttccg
      361 gcgtctgcgc gccatcgccc atggcgatgg tgccgttcat gtacagctcg ccggccttgg
      421 cgacacgatc gatcagctcc gggatcggaa tctcgcgcag cgccgcgcgc gcgcgcgacg
      481 ccttgcgcat gtcgcgcccg atcaacccgc cgttcgcgcg gctcaccttc gcgatcggct
      541 cgccggtcga gaagtggacc acatcgtcca cttccaagct cgtgtacggc tgaccccaac
      601 ggagaatcgg taattggatc atggcaatcg tcgcggtccg cggctcgcgt tccgcccgtc
      661 gtcgtggtgc cagcctagac tagctagtag acgccgaccg tggtggtggc ggccagcgct
      721 cgatacggcc gcacgccgct gacgccgtcc cacgggtaca ggtcgcaggc gggctcgcgc
      781 tcaccctcgt cgcgctcgag aaagccgggc atgaagaact ctctggtgag cgtcgtgagc
      841 ttgacgcgtc cggtcgcgcc gtagccgacg accgtggccg gatcgtcgag gtccaccacc
      901 tccgtgaccg cacgcggctg cggcgcgtag taggtgatct tgtagttgtt gtgcgggccg
      961 gacggactgc tcgaggcgag ccccatcagc gtgttgccgt aggtcggtgt catgtaggcg
     1021 ccgtcgagca gctcctcgtg ggcgaaccgg ttccactgag gcgtaaactc cgtgccgccg
     1081 gagaaaattc cggtgatgcc ggccttgctc aggctcgtgc ccatctcctc gagccgcagc
     1141 gccagcgcct cgagcagctt cggcgtcgtg aacatgcatt tgatgttgtg gccggcgccg
     1201 aggatggtca cggcctgatc gatcacgtgg tccttgtacg cctgcaggtg ctcggtccag
     1261 cccttcttaa tgagcttgat cacccagcgc ggatcgagat cgaccatgaa gcacatgccg
     1321 ccgcgatgct gcgcgaggtg ctcgatcgcc aggcgcaggc gccgcggccc ggacggcccg
     1381 accatcagcc agtccgatcc cggcggaaat ttttccgcgg gcagcgtgtc gctgaagagc
     1441 gagtaatcga tccggaagtc ttcgtggctg atccgcgact tcggcacgcc ggtgctgccg
     1501 ccggtctcga acacgtaaat cggtttcccg gcgtacgctt tcggcaccca tcgtcccacc
     1561 ggcccgccgc gcagccactc gtcctcgaag aacccgaact tggtcaggtc ggcgtagccg
     1621 ttgacgtcgg cgagcgggtc gaagtccagc tgcttcgcgc gttcgagcca gaacggacag
     1681 ccggtcgcgg gatcgaaatg ccagcgcacg atctcgcgga cgtgcgcgtc cagccgctcg
     1741 cgggcggcgg caagggcggt tggagacact gcgggtgagg acgtctgcga catggcgggt
     1801 cgatcttatc aaaagccctt gcggccggat tcttgcgaca ccgcgctcag atagcgggcg
     1861 cgctccagcg cctcgggggt cgccgcgaac gcatccaccg gcaccggcag ccgccacgtc
     1921 cagttctggt cgtcgacgac ggcggggacg ttgatgcggt cccgccagcc gaagatgtcc
     1981 tggagcggca ggatgagcag ccgcgacccc gacgcgaaga gcgtctcgag caatgcgtca
     2041 cgcacgcgat ccgagtacgg ggcatcgaac ggaatgccgg cgtgggcgag gggcggcaac
     2101 gcgagcagcg cctggcgttc cgcttcgccc gcggtgtccc accactcggc cagcgattcg
     2161 gtgtcgtgcg tgccgctcgt ggcgacggac gcggacgcat acgtcgccgg atcgaggaac
     2221 ggatggccgg tcgcgtgcca gtcgcgctcc cagcgcatca ctttcatccc ggggatgccg
     2281 cgctttgcga gcgagacacg caggaagtcc ggaacggtgc caaggtcctc gccgatcagg
     2341 ctcgcaccgc tgtcggcaaa gagcgtcaag aggtgctcgc ccatcgcgcg ctgctgacgt
     2401 tcctcggccg gccagaagcc cggctccgtg tcgggcttgc gcacataggt gcggaagaag
     2461 ccgatcaggt gatcgatgcg gaagccgtcg tagaggtcgg ccgagcgccg cgcgcgctgg
     2521 c
//
LOCUS       DASSYW010000867         2109 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_988697, whole genome shotgun sequence.
ACCESSION   DASSYW010000867 DASSYW010000000
VERSION     DASSYW010000867.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2109)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2109)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2109
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_988697"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..567
                     /locus_tag="VFN38_13780"
     CDS             <1..567
                     /locus_tag="VFN38_13780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012889.1"
                     /translation="RLPNASVHAQRQLLHVIDRFGEWPAGFSPEAYATNADPSVRREA
                     VKLMLRREDMRDAAILIGLDDADERTVGIVLAAALKRCPSGAVPILMRRVDSSTLSAE
                     LRARGIRALAASGSLAAMRWVAQRSVKKHWLLRTPVLREKSPQPISSIAGLAAHWSTA
                     PEAAEVLALVARSKDADLKSAAARTGAA"
     gene            564..1769
                     /locus_tag="VFN38_13785"
     CDS             564..1769
                     /locus_tag="VFN38_13785"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HET9012890.1"
                     /translation="MSDTTPTAIRFLTSMAQALATMSLYAEGHPARARAAVSSFDILR
                     ELQASDPRPSFSFLGSDVVYGQQAIRGLTDWEWAMKLANVGVQRLEFADIVEREPYVA
                     FLEDVLARVSAFSAIAAANAPATVPVPRGTGPTPIRFGAVGVRGANDQRQPDVTPVDE
                     ASLLDLNAEVDAIRWVHEEVDTREEIPLLEAESIVRSLSVAMHGDSQMLLPLLTLKEF
                     DQYTTTHALNVSVLSMGLAEYMGLSPREVRAYGVAGMLHDLGKVRVPKDILTKPGKLT
                     PEEWSLMRSHTVEGARLILQSDQNLDVAALVAFEHHIMINGGGYPDRHYRCDCHKASR
                     LVHVCDVYDALRTKRPYRDAWEPGATLTYIERGIGTEFDADVAKAFVSMMGKWEPRLA
                     VANLSPVAA"
     gene            1766..>2109
                     /locus_tag="VFN38_13790"
     CDS             1766..>2109
                     /locus_tag="VFN38_13790"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HET9012891.1"
                     /translation="MTAPEREAVEAERRFRSLDDPETLRLIAQNIEEGIYITNATGEI
                     LDANPAFLRMFGVSSVRDLARFRAGDLIADPNRRALEMALLDRDGAVRDFELTIVRPD
                     GQRRTVLDTTYV"
BASE COUNT          334 a          715 c          720 g          340 t
ORIGIN      
        1 cgccttccga acgcgtcggt gcacgcccag cggcagctgc tgcacgtcat cgaccggttc
       61 ggcgagtggc ccgcgggatt ctcacccgaa gcgtacgcga cgaacgccga ccccagcgtc
      121 cgccgtgaag cagtgaagct catgctccgt cgcgaggaca tgcgggacgc cgcgattctg
      181 attggcctcg acgatgcgga tgagcggacc gttggcatcg tgctcgccgc ggcgctcaag
      241 cgctgcccga gcggcgccgt cccgatactc atgcgtcggg tggacagctc gacactgagt
      301 gcggagcttc gtgcacgcgg gatccgcgcg ctcgctgcct ccggctcgct cgcggccatg
      361 cgctgggtcg cgcagcggtc cgtgaagaag cactggctcc tgcggacgcc cgtgctgcgc
      421 gaaaagtcgc cgcagcccat ctcatccatc gccggcctgg ccgcacattg gagcacggcg
      481 ccggaagcgg ccgaagtcct cgcgctcgtc gcgaggtcga aggacgctga cctcaagagc
      541 gccgctgctc ggaccggagc cgcatgagcg acacgacgcc caccgccatt cgcttcctca
      601 cgtcgatggc gcaggccctg gccacgatgt ccctctatgc ggaaggccat cccgctcgag
      661 cgcgcgcggc ggtctcgtcg ttcgacatcc tgcgcgagct gcaggccagc gacccgcgac
      721 cgagcttctc ctttcttggc agcgacgtcg tgtacggcca gcaggccatt cgcggcctga
      781 ccgattggga gtgggccatg aagctggcga acgtcggcgt gcagcgactc gagttcgcgg
      841 acatcgtcga gcgggaaccg tacgtcgcgt ttctcgagga cgtcctcgcg cgcgtctcgg
      901 ccttctcggc gatcgccgcg gccaatgcgc cggcgactgt tccggtgccg cgcggaaccg
      961 gaccgacgcc gatccgattc ggcgccgtcg gcgtgcgcgg cgcgaacgat cagcggcagc
     1021 ccgacgtgac gccggtcgat gaagcatcgt tgctggacct gaacgcggag gtcgacgcca
     1081 tccgctgggt gcacgaggag gtggataccc gcgaggagat tccgctcctc gaggcggagt
     1141 cgatcgttcg ctcgctctcg gtcgcgatgc acggcgacag tcagatgctg ctgccgctgc
     1201 tcacgctcaa ggagttcgac cagtacacga cgacgcacgc gctcaacgtg tcggtgctgt
     1261 cgatggggct cgccgagtac atgggattgt cgccgaggga ggtgcgcgcc tacggggttg
     1321 cgggtatgtt gcacgacctc gggaaagtgc gcgtccccaa ggacatcctg accaagcccg
     1381 gcaagctcac gccggaggag tggtcgctca tgcggtcgca cacggtggag ggcgcgcggc
     1441 tgattctgca gagcgatcag aacctcgacg tggcggcgct cgtggcgttc gagcaccaca
     1501 tcatgatcaa cggcggcggc taccccgatc ggcactatcg gtgcgattgc cacaaggcga
     1561 gcaggctcgt gcacgtctgt gacgtgtacg acgcgctgcg caccaagcgg ccctaccgcg
     1621 acgcgtggga gccgggtgcg acgctcacgt acatcgagcg cggcatcggc acggagttcg
     1681 atgcggatgt cgcgaaagcc ttcgtttcga tgatggggaa gtgggagccg cgactggccg
     1741 tcgcgaatct ctcacccgtc gcggcgtgac ggcccccgag cgcgaagccg tcgaggcgga
     1801 gcgacgcttc cgcagcctcg acgatcccga gacgctccgt ctcatcgcgc agaacatcga
     1861 ggagggcatc tacatcacga acgcgaccgg cgagattctc gacgccaatc ccgcgttcct
     1921 gcgcatgttc ggcgtgtcgt cggtccgcga cctggcgcgc ttccgtgccg gcgacctcat
     1981 cgccgatccg aaccgccgtg cgctggagat ggccttgctc gaccgtgatg gagccgtgcg
     2041 cgacttcgag ctcacgatcg tgcgtcccga tggccagcgt cgcacggtgc tcgacacgac
     2101 gtacgtctg
//
LOCUS       DASSYW010000868         2079 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_479393, whole genome shotgun sequence.
ACCESSION   DASSYW010000868 DASSYW010000000
VERSION     DASSYW010000868.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2079)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2079)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2079
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_479393"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            159..1967
                     /locus_tag="VFN38_13795"
     CDS             159..1967
                     /locus_tag="VFN38_13795"
                     /inference="COORDINATES: protein motif:HMM:NF017745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF885 domain-containing protein"
                     /protein_id="HET9012892.1"
                     /translation="MKRTILAVACVLSAGCSAHRTAPVAATAPAPVVAADVNQKLDSL
                     AEAYFEAMLPLNPLLATAIGDTRYNHLYTVGLAPDERARSRAIVDEYGGRLQAIDRAT
                     LDEAHRITYDVFRRGLESQRLGQRFPSHLVPLNQFFNFTATFVQQGSGTGLHPFRTVR
                     DYNDFLSRIGGFEKVVDVTIANMREGMAAGVVQPRVLMERVLPQLAAHVVTDPTASLF
                     WGPVANMPASIPPAERTRLTAAYAAAIRDQVVPAFRRLHDFVRDEYLPRTRTTVGLGA
                     LPDGRAWYEYLVRAVTTTDLTPEQIHDIGLSEVARIHREMEAVMRQVGWKGDLPSFMR
                     HVQTDPRFRYATREDMLADFRSAQARIDASTDRLFDVRPAANYEIRPVEPFRERSFSG
                     GSYTAASLDGTRPGIFYLNTYDPPSRARYGMESLLIHEGSPGHHFQISIARELTGVPR
                     IRRFGGFTAYAEGWGLYAETLGKELGLYTDPYQYFGYLSSELWRSIRLVLDTGIHARG
                     WTHAQASEYARRNSATSETIIQSEVERFSAIPAQGLAYKIGQMKITELRRRAEAALGP
                     RFDIKAFHRAVLEDGALPLDVLDAKIDRWIAARQRG"
BASE COUNT          331 a          740 c          722 g          286 t
ORIGIN      
        1 cccgaccccg acctgcgtcc tcgagcccac caagcccgcc gtgctggtcg agctggggaa
       61 gcggaggaag tcgcgcacac ggcaatgagc agccaggcgc tgcagtccga ggcagtgcgg
      121 aacgggctcg ggggtcgcca accacaggag cgttctcctt gaagcgcacc atcctcgctg
      181 tcgcgtgtgt cctctcggct ggttgcagtg cacaccggac cgcgccggtc gcggcaaccg
      241 cacctgcccc cgtcgtcgcg gccgacgtca accagaagtt ggacagcctg gccgaggcgt
      301 acttcgaggc gatgctgccg ctcaacccgc tgctcgcgac ggcgatcggg gacacgcgct
      361 acaaccacct ctacacggtg ggcctggcgc ctgacgagcg cgcgcgctcg cgcgcgatcg
      421 tggacgagta cggggggcgg ctgcaggcga tcgaccgcgc gacgctggac gaggcgcacc
      481 ggatcacgta cgacgtgttc cgacgcggac tggagagcca gcgcctgggc caacgcttcc
      541 ccagccacct ggtgccgctc aaccagttct tcaacttcac ggcgaccttc gtgcagcagg
      601 gctcgggcac cggcctgcac cccttccgca cggtcaggga ctacaacgac ttcctgtcgc
      661 gcatcggcgg attcgagaag gtggtcgacg tcaccatcgc caacatgcgc gaggggatgg
      721 ccgcgggagt cgtgcagccg cgcgtgctga tggagcgggt gctgccgcag ctcgccgcgc
      781 acgtcgtgac cgacccgacg gcgagcctgt tctggggccc ggtggcgaac atgccggcga
      841 gcattccacc ggccgagcgc acgcggctca cggcggcgta tgcggcggcg attcgcgacc
      901 aggtggtgcc cgccttccgc cggctgcacg acttcgtccg cgacgagtac ctgccgcgca
      961 ccagaaccac cgtggggctg ggcgcgctgc cggacgggcg cgcgtggtac gagtacctgg
     1021 tgcgcgccgt caccacgacc gacctgacgc cggagcagat tcacgacatc ggactgtcgg
     1081 aggtggcacg catccatcgc gagatggagg cggtgatgcg gcaggtgggc tggaagggcg
     1141 acctgccgtc gttcatgcgg cacgtgcaga cggacccgcg cttccgctac gcgacgcgcg
     1201 aggacatgct ggccgacttc cggtccgcgc aggcgcgcat cgacgcgtcg acggaccgcc
     1261 tgttcgacgt ccggccggcg gccaactacg agatccgccc cgtggagccc ttccgcgagc
     1321 gcagcttcag cggcgggtcg tacacggcgg cgagcctgga cggcacgcgg cccgggatct
     1381 tctacctcaa cacgtacgac ccgcccagcc gcgcgcgcta cgggatggaa tcgctgctga
     1441 tccacgaggg ctcgcccggg caccacttcc agatctccat cgcgcgcgag ctcaccggcg
     1501 tgccgcgcat ccgccgcttc ggcggcttca cggcgtacgc ggaggggtgg gggctgtacg
     1561 cggagacgct gggcaaggag ctgggactgt acaccgatcc gtatcagtac ttcggctacc
     1621 tgtcgtcgga gctgtggcga tcgatccgcc tggtgctcga caccgggatc cacgccaggg
     1681 ggtggacgca cgcgcaggcc agcgagtacg cccgccgcaa ctcggccacg agcgagacca
     1741 tcatccagag cgaggtggag cgcttcagcg ccatcccggc gcaggggctg gcgtacaaga
     1801 tcggccagat gaagatcacg gagctgcgcc gccgcgccga ggccgcgctg gggccgcgct
     1861 tcgacatcaa ggccttccac cgcgccgtgc tcgaagacgg cgcgctcccc ctggacgtgc
     1921 tcgacgccaa gatcgaccgc tggatcgccg cacgacagcg ggggtgatca ggcccgcgca
     1981 gatcgtgcac ggaaggggcc ggtgcgccgc cgatcgcagc tccagcccga gtccgacgcg
     2041 aagctcgagc cgccccagtc taccctttct tcaccgtca
//
LOCUS       DASSYW010000869         2487 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_161451, whole genome shotgun sequence.
ACCESSION   DASSYW010000869 DASSYW010000000
VERSION     DASSYW010000869.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2487)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2487)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2487
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_161451"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1205)
                     /locus_tag="VFN38_13800"
     CDS             complement(<1..1205)
                     /locus_tag="VFN38_13800"
                     /inference="COORDINATES: protein motif:HMM:NF012356.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HET9012893.1"
                     /translation="MRVWPGRPYPLGASWDGTGVNFALFSEHATGVELCLFREPHDAD
                     EAARIRMCERTDQVWHCYLPDARPGQYYGYRVHGPYAPERGHRFNPAKLLIDPYARAI
                     TGSIKWSNDLFAYKVGGGREDLEPDPDNSAGGVPKSVVIDNAFTWLDDAPLHIPYNRT
                     IIYECHVKGMTQRHPDVPPELRGTYLGLCSDPMIEYFQSLGVTALELLPVHQFVVDRH
                     LAERGLTNYWGYNTIGFFAPDVRYATRGLGNQVYEFKTMVKTLHAAGLEVILDVVYNH
                     TGEGNHLGPTLSLRGIDNATYYRLEPVNKRFYTDFTGTGNSLNMLHPRTIQLVMDSLR
                     YWVDEMHVDGFRFDLAPVLARELYEVDKLSAFFDIMQQDPTLADVKLIAEPWDVGPGG
                     YQVGNFPVR"
     gene            complement(1208..>2487)
                     /locus_tag="VFN38_13805"
     CDS             complement(1208..>2487)
                     /locus_tag="VFN38_13805"
                     /inference="COORDINATES: protein motif:HMM:NF023367.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF3459 domain-containing protein"
                     /protein_id="HET9012894.1"
                     /translation="PWGRAVNYDGPGSDGVRRWAHDNALHWITEYHVDALRLDAVHGI
                     YDFGALQFLEELSDEVHELGRRMGRKIQLMAESDLNDPRLVRPPAQGGYGLDAQWADD
                     VHHTIHATLTGERHGYYQDFQEIATIADVYREPFFYARRYAPHRDRMHGRSSAGVPRQ
                     RFVVCAQNHDQVGNRPRGERLASLVTPDRARLAAALVLLSPYVPLLFMGEEYGETAPF
                     LYFVEHGDPALVDAVREGRRKEYEAIGLVEGQADPQAEETFERSRLRWERRAEGEGAR
                     MLALYTDLLALRREEPALEPGASAAHVQGGTDWCTVFREMPARGDIYDAVRARRTVWY
                     AFNLSGHPRDIPVPAQATQAWRLRLATDAEGYGGSGLLVHSIAAAEPENDLNDAPKRL
                     LPPSPSSGHHARTVRLPAWSAAVYVRDFTAAAT"
BASE COUNT          334 a          882 c          891 g          380 t
ORIGIN      
        1 cagcgcacgg ggaagttgcc cacctgatac ccgccgggcc cgacgtccca cggctcggcg
       61 atcagcttca cgtcggcgag cgtcgggtcc tgctgcatga tgtcgaagaa cgccgacagc
      121 ttgtccacct cgtacagctc gcgcgccagc accggcgcga ggtcgaagcg gaagccgtcc
      181 acgtgcatct cgtccaccca gtagcgcagc gaatccatca ccagctggat cgtgcgcggg
      241 tgcagcatgt tgagcgagtt gccggtgccg gtgaagtcgg tgtagaaccg cttgttgacc
      301 ggctccaggc ggtagtaggt ggcgttgtcg atgccgcgca gcgacagcgt ggggcccagg
      361 tggttgccct cgccggtgtg gttgtacacc acgtcgagga tcacctccag ccccgcggcg
      421 tgcagcgtct tcaccatggt cttgaactcg tagacctggt tgcccagccc gcgcgtggcg
      481 taccgcacgt cgggcgcgaa gaagccgatg gtgttgtacc cccagtagtt ggtgagcccg
      541 cgctcggcga ggtggcggtc caccacgaac tgatgcaccg ggagcagctc cagcgcggtg
      601 acgccgaggc tctggaagta ctcgatcatc gggtcgctgc acagcccgag gtacgtcccg
      661 cgcagctccg gaggcacgtc ggggtgacgc tgggtcatcc ccttcacgtg gcactcgtag
      721 atgatcgtgc ggttgtacgg gatgtggagg ggcgcgtcgt ccagccaggt gaaggcgttg
      781 tcgatcacga ccgacttcgg caccccgccc gccgagttgt cggggtcggg ctcgaggtcc
      841 tcgcggccgc cccccacctt gtaggcgaac aggtcgttgc tccacttgat ggacccggtg
      901 atcgcccgcg cgtacggatc gatcagcagc ttggccgggt tgaagcggtg tccccgctcc
      961 ggcgcgtacg gcccgtgcac gcggtagccg tagtactggc ccggccgcgc gtcggggagg
     1021 tagcagtgcc acacctggtc ggtgcgctcg cacatccgga tccgcgcggc ctcgtcggcg
     1081 tcgtgcggct cgcggaagag gcagagctcc acgccggtgg cgtgctccga gaagagggcg
     1141 aagttcaccc ccgtgccgtc ccagctcgcg cccagcgggt aggggcggcc gggccagacg
     1201 cgcatcgtca cgtcgccgcc gcggtgaagt cgcgcacgta caccgcggcg ctccacgccg
     1261 ggagccgcac ggtgcgggcg tggtgcccgg aggaaggcga ggggggcagc agtcgcttcg
     1321 gtgcgtcgtt caagtcgttc tccggctcgg cggccgcgat ggagtgtacc aggagtcccg
     1381 agccgccgta tccctcggcg tcggtggcga ggcgcaggcg ccaggcctgg gtcgcctggg
     1441 cgggcacggg gatgtcgcgc gggtgtcccg acaggttgaa ggcgtaccac acggtgcgcc
     1501 gcgcgcgcac cgcgtcgtag atgtcgcccc gcgccggcat ctcgcggaac accgtgcacc
     1561 agtcggtccc cccctgcacg tgggccgcgc tcgcgcccgg ctccagcgcg ggctcctcgc
     1621 gccggagcgc cagcaggtcg gtgtagaggg cgagcatccg cgccccctcc ccctcggcgc
     1681 ggcgctccca gcgcagccgg ctgcgctcga aggtctcctc ggcctgcgga tccgcctgcc
     1741 cctccacgag gccgatggcc tcgtactcct tgcgccgccc ctcgcgcacc gcgtccacca
     1801 gcgccgggtc gccgtgctcc acgaagtaca ggaagggcgc ggtctcgccg tactcctccc
     1861 ccatgaacag cagggggacg tacggcgaca gcagcaccag cgcggcggcg aggcgcgcgc
     1921 ggtcgggcgt cacgagcgac gcgagccgct cgccgcgggg acggttgccc acctggtcgt
     1981 ggttctgcgc gcagacgacg aagcgctgcc gcggcactcc cgccgacgag cgcccgtgca
     2041 tccggtcccg gtgcggcgcg tagcggcgcg cgtagaagaa gggctcgcgg tacacgtcgg
     2101 cgatcgtcgc gatctcctgg aagtcctggt agtagccgtg ccgctcgccg gtgagcgtcg
     2161 cgtggatcgt gtggtgcacg tcgtcggccc actgcgcgtc cagcccgtag cccccctgcg
     2221 ccggcggccg caccagccgc gggtcgttca ggtcgctctc ggccatgagc tggatcttgc
     2281 ggcccatccg ccgtcccagc tcgtgcacct cgtccgacag ctcctccagg aactggaggg
     2341 cgccgaagtc gtagatgccg tgcaccgcgt ccaggcgcag cgcgtccacg tggtactcgg
     2401 tgatccagtg cagcgcgttg tcgtgggccc agcggcgcac cccgtcgctg cccggcccgt
     2461 cgtagttcac ggcgcggccc cacggcg
//
LOCUS       DASSYW010000870         3303 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1002972, whole genome shotgun sequence.
ACCESSION   DASSYW010000870 DASSYW010000000
VERSION     DASSYW010000870.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3303)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3303)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3303
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1002972"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            299..841
                     /locus_tag="VFN38_13810"
     CDS             299..841
                     /locus_tag="VFN38_13810"
                     /inference="COORDINATES: protein motif:HMM:NF017496.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Uma2 family endonuclease"
                     /protein_id="HET9012895.1"
                     /translation="MAAPVYYTADMVRAMPDDGNRYEVVYGELLVTPSPRPWHQIILQ
                     RLGLALGNYVQREPVGQVLSSPADISWGRDVLVQPDLFVVPHDEVRALTWSRMRTLLL
                     VAEVLSPSSARGDRFLKRLRYREAGVPLYWVVDGDERMVEVWTPADDFPAVERERLVW
                     HPSGAAEPLVLSLAELFRPV"
     gene            complement(863..>3303)
                     /locus_tag="VFN38_13815"
     CDS             complement(863..>3303)
                     /locus_tag="VFN38_13815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012896.1"
                     /translation="ADIYALGVLGYEILAGQPPFTAPTAQAVVAAHMLQQPAPLATLR
                     PSVPPALAALLMRCLEKRPADRPQSAADVLHALESVMTPVPGSESARAWGVAAAPSPT
                     VAPSTLPESAATSTGWGTRATDAAASGSAAVHPVSAVRRRRVVLLALGAAVIAAVAGW
                     LVLRRSRAAVPLDADLVAVAPFDVPDARLAIWREGLVDVLSRNLDGAGPVRSVPPTTV
                     IRRWSGRADRPSATELGRRTGAQIVVFGSLLAAGRDSARLTVTALDVADGRPLADLEL
                     RDAGDRVDRLADSLTVRLLRELGRTRQIEVFRATSMGSTSLPALKAFLRGEQWFRRAS
                     WDSAMASYDAAIALDSMFPLPLWRSGIVLGWSHEAGDSVSVARVIRAGTLTHGLAPRD
                     SLRITADSILAGLYQDTPRVSPAAIRRVHAIAEDLTRRYPDDAESWYLLGEARFHWGP
                     PVRSTPRAALDAFDRAIRLDSAFAPAYIHAIALALSLDGPEAGHRYGERYLALGPTNA
                     SAAGIRLADQLMERPGATPANTDSLLREASPSTLRDAGLALRNAADSGEAAVAVARAL
                     AAAPEGDAAWLRPADRELIFGMQLLYRGHVREAVPIIFRTPAALPLHWTEAALVSSSP
                     PAGAEAMMRGLLDGSRLMALAVTLPWWAGRGDSATIRRIEHTADSVARVMPNEINRGI
                     VRYAALAAPAYLALVRHDTAGAVRILKSLPDSLCALCYSQRMTLGQLLAARHEDQEAS
                     KLLDQWLIDFTVPSEVLWRLERGRVAERMGDREKAARSYQFVVNVWRHADPELQPYVA
                     EAREGLARMTSEPR"
BASE COUNT          454 a         1225 c         1205 g          419 t
ORIGIN      
        1 cgaacaccag gctggccgcg gcagcggcga gcgcgcgaag actcggcatg aggcggctcc
       61 ggacggtgga gggacgtgga tctggaggaa gtgtatggcg agcgcgggct ggcggctgtg
      121 agggttctca ccggggcgaa gcgcaggaca tgcaatcggt tgcacgacct ggcgccgggc
      181 cgagagcgaa gcgactccgt tccgcgccgg cgagatgacg ctccggcccg gcggcgtccg
      241 cagggtggcg gatgcgctcc tcttgcgccc ctcccgccgc cgagacgaac gtatgggcat
      301 ggctgccccc gtgtactaca ccgccgacat ggttcgcgcg atgccggacg acggcaaccg
      361 ctacgaagtc gtgtacggcg agctgctggt gacgccgtcg cctcggccct ggcaccagat
      421 catccttcag cgcctgggcc tggcactcgg caactacgtt cagcgcgagc ccgtgggcca
      481 ggtcctgtcc tcgcccgccg atatctcgtg gggccgggac gtgctggtgc agcccgacct
      541 attcgtggtg ccgcacgacg aggtccgcgc cctgacttgg agccgcatgc gcacgctcct
      601 cctggtggcc gaggtgctga gcccatcctc ggcgcggggc gaccgtttcc tcaagcggtt
      661 gcgctaccgg gaggccggcg tgccgctcta ctgggtggtg gacggcgacg aacgaatggt
      721 ggaggtctgg acgccggcgg atgacttccc tgcggtggag cgcgagcggc tcgtgtggca
      781 cccgtccggc gcggcggagc cgctcgtcct gagcctcgcg gagctgttcc gaccggtcta
      841 ggccgagcgg ggttccgccc ccctacctcg gctcgctggt catcctcgcc aacccctccc
      901 gcgcctccgc cacgtacggc tgcagctccg gatccgcgtg ccgccacacg ttcaccacga
      961 actggtacga ccgcgccgcc ttctcccggt ctcccatccg ctccgccacc cgcccgcgct
     1021 cgagcctcca gagcacctcg ctcggcaccg tgaagtcgat cagccactgg tccagcagct
     1081 tcgacgcctc ctgatcttcg tgccgggccg cgaggagctg gcccagcgtc atccgctggg
     1141 aatagcacag cgcgcaaagc gagtcgggca gcgacttcag gatgcggaca gcgccggccg
     1201 tgtcgtgccg cacgagcgcc agataggccg gcgccgcgag cgccgcgtag cggacgatgc
     1261 cgcggttgat ctcgttcggc atgacccggg cgacggagtc ggcggtgtgc tcgatccgtc
     1321 ggatcgtcgc gctgtccccg cgccccgccc accacggcag cgtgaccgcg agcgccatca
     1381 gccggctgcc gtccagcagt ccgcgcatca tggcttccgc gccggccggt ggcgacgagc
     1441 tcacgagcgc cgcctcggtc caatgaagag ggagcgcggc cggagtccgg aagatgatcg
     1501 gtaccgcctc acgcacgtgg ccgcggtata gcagctgcat gccgaagatc agctcccgat
     1561 cggccgggcg gagccacgcg gcgtcgccct cgggcgcggc cgcgagcgcg cgcgcgaccg
     1621 ccacggccgc ttcgccggag tcggcggcgt tgcggagggc gagccctgcg tcccgcagcg
     1681 tcgagggcga cgcctcgcgc agcaggctgt cggtgttcgc tggcgtcgcg cccgggcgct
     1741 ccatcagctg gtccgccaga cggatgcccg ccgccgacgc gttggtgggc ccgagggcga
     1801 gatagcgctc gccatagcgg tggcccgcct cggggccgtc gagcgaaagc gcgagcgcga
     1861 tcgcgtggat gtaggccggg gcgaacgccg agtcgagccg gatggcgcgg tcgaaggcgt
     1921 cgagcgccgc gcggggcgta ctccggaccg gggggcccca gtggaaccgg gcttcgccca
     1981 ggagatacca cgactcggcg tcgtccgggt agcgccgcgt gaggtcctcc gcgatggcgt
     2041 gcacccgccg gatcgctgcg gggctcacgc ggggggtatc ctggtacagt ccggccagga
     2101 tggagtcggc cgtgatgcgc aggctgtcgc gcggggcgag cccgtgcgtc agcgtgcccg
     2161 cgcgaatcac ccgcgccacc gacaccgagt cgcccgcctc gtgcgaccag cccaggacta
     2221 tgcccgagcg ccagagcggc agcgggaaca tgctgtcgag cgcgatcgcc gcgtcgtacg
     2281 aggccatcgc cgagtcccac gacgcccggc ggaaccactg ctccccgcga aggaaggcct
     2341 tgagcgccgg cagcgaggtg gagcccatgg acgtcgcacg gaagacctcg atctgccggg
     2401 tccgccccag ctcgcgcagc agccgcacgg tgagcgagtc ggccaggcgg tccacccggt
     2461 cgcccgcgtc gcgcagctcg agatcggcga gcggccggcc gtcagccaca tcgagcgccg
     2521 tgaccgtgag gcgcgccgaa tcccgcccgg cagcgagcag gctgccgaac accacgatct
     2581 gggcgcccgt gcgccggccc agctcggtgg cggagggccg gtccgcccgc ccgctccagc
     2641 ggcggatgac cgtcgtcggc ggcacgctcc gcaccgggcc cgcgccgtcg agattccggg
     2701 agagcacatc caccagaccc tcgcgccaga tcgcgagcct ggcgtcgggc acgtcgaacg
     2761 gggcgaccgc gaccaggtcg gcgtcgagcg gcacggccgc gcgcgagcgg cggagcacca
     2821 gccaccccgc caccgcggcg atcaccgcgg cgccgagggc gagcagcacg actcggcgcc
     2881 tgcgcacggc cgagacaggg tggaccgccg ccgagcctga cgccgcggca tccgtcgccc
     2941 tcgtccccca cccggtcgag gtcgctgccg actccggcag tgtcgagggc gctacagttg
     3001 ggctcggcgc cgccgcgaca ccccatgccc tcgccgactc cgaccccggc accggcgtca
     3061 tcaccgactc gagggcgtgc agcacgtcgg ccgcactctg cgggcggtcc gccggccgct
     3121 tctccaggca gcgcatcagg agcgccgcga gtgccggcgg cacactcggc cggagcgtcg
     3181 ccagcggcgc cggctgctgg agcatgtgcg ccgccaccac cgcctgcgcg gtcggcgcgg
     3241 tgaacggcgg ctggcctgcc aggatctcgt agcccaggac gccgagcgcg tagatgtccg
     3301 cgc
//
LOCUS       DASSYW010000871         4270 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1154592, whole genome shotgun sequence.
ACCESSION   DASSYW010000871 DASSYW010000000
VERSION     DASSYW010000871.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4270)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4270)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4270
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1154592"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1373
                     /locus_tag="VFN38_13820"
     CDS             <1..1373
                     /locus_tag="VFN38_13820"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HET9012897.1"
                     /translation="DVSRAESPGSLTQAQLDASSRMADPLSVRKHAGKTVRQGDLSLT
                     LDRALGDEGALSAVVYGSTRTLANPLAFATVDVDRSSGGASLRLNGGITLAGRAARLA
                     AGADVQWQHDDRLESENCIDAAAASAACPAGASLRGTVRKDQREQVTSIGPFVRAELA
                     LAPRLLASAGVRADAVRFRVGDRLVSGTNPDDSGDRTLHAVSPALGVVWRAAPLASAY
                     ATLSTSFETPTTTELGNKPDGSAGINPDLQPQRTVALEVGTKGLLPTLGVQWDVALFE
                     ARARDELVPFDIPGGAGRRYFRNAGRTLRRGGEVGVQGESGPLTLQAAYTYSRFRYED
                     YTVGTTSYAGRRIPGIPEHALALAVALRFGSATLASTTDVASAMEVDDANSAQAPART
                     IVGLALSNRVELAGVSVSPLVAVQNLGGVRSVGSVSVNATGGKYFEPAPGRTLLVRVA
                     LGRAGY"
     gene            1482..2927
                     /locus_tag="VFN38_13825"
     CDS             1482..2927
                     /locus_tag="VFN38_13825"
                     /inference="COORDINATES: protein motif:HMM:NF025034.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartyl protease family protein"
                     /protein_id="HET9012898.1"
                     /translation="MTPPPFPHRLVLVVLAMGVLGCRPAGVAEPEVDAAAIVEGDAAP
                     GVHTDTIEDAFTVRIDRARWSARNRTETRGEFWDAIAVLDVPAAERAAKSVDQKTFVL
                     ALRTLMSSDPDGAAIAFNALHTQATDPAVRARARVGLTMALSWRSDWQALARIGHDPD
                     SIAAQLESPVVQAGVERWARALAAAPTPEVFVPEESVTLPMRRSAFGTPVITVRINGR
                     PYEFWLDTGASMTLLSAQVAIESGVFLAAPDTLALGVVAGHIPARAVIIDSLALGPVM
                     ARGLSAAVVNPGALRLDRSQRSGIVEAVQIDGVIGTDLLRHLDVVLDAGAGSITIRRP
                     RTDVRAPRNLFWVGYPVVKLVTREGRPVLFGLDTGAEGTFVTTALLRKLPRTPIAARL
                     MTLGGLGKEKERTQWVARTIALSDGDYAITLRNTPITPARHWTFVTFDGVIGSDVALA
                     SRMHLDFANGVFDVRPSAARPDAGPTVTVSP"
     gene            complement(2947..>4270)
                     /locus_tag="VFN38_13830"
     CDS             complement(2947..>4270)
                     /locus_tag="VFN38_13830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HET9012899.1"
                     /translation="PATVAAQDAAAYRPAADRLIDAAMKDSAAWNRIAELTDTFGHRL
                     SGSEPLERAIDWMLDRMRTEGLENVRGEPVMEPHWVRGEESAELLAPRRKKLAMLGLG
                     GSTATPAGGITAPVLVVTSFDDLRARAAEARGKIVLFDVPFTDYGQTVAYRGAGAAAA
                     SRAGAVAMLLRSVASFSMNSPHTGGMRRDTTVAPIPAAAITVEDAMLLHRMQSRGVTP
                     TVHLVMNARTLPDAPSRNVVAEIRGRELPDEVVVLGGHIDSWDVGQGAMDDAGGVVAA
                     WEAVRLMKQLGLRPRRTVRVVGWTNEENGTRGGTAYRNAHDPARHVFALESDNGVFRP
                     YGIAAVGTDSALAMLRRIAPLLARIGADSVVRGGGEADIGPLLAAGVPGAGLHVDGTR
                     YFWYHHSDADTPDKLDPADVARCVATMAVYAYVLAEMPERLPRGPAAR"
BASE COUNT          520 a         1630 c         1563 g          557 t
ORIGIN      
        1 ccgacgtctc gcgcgccgag agcccgggat cgctcaccca ggcgcagctc gacgcgagct
       61 cgcgcatggc cgatccgctc tccgtgcgga agcacgccgg caagacggtg cggcagggcg
      121 acctgtcgct caccctcgac cgcgcgctgg gcgacgaggg cgcgctgagc gcggtggtgt
      181 acggcagcac gcgcaccctc gccaacccgc tcgccttcgc caccgtggac gtcgaccgct
      241 cgagcggggg cgcctcgctc cgcctgaacg gcggcatcac cctcgccggc cgcgcggcgc
      301 gcctcgccgc cggcgccgac gtgcagtggc agcacgacga ccggctggaa tcggagaact
      361 gcatcgacgc cgcggcggcg agcgcggcct gtcccgccgg cgcctcgctg cgcggcacgg
      421 tgcgcaagga ccagcgcgag caggtgacga gcatcgggcc cttcgtgcgc gccgagctgg
      481 cgctggcgcc gcggctgctc gcgtcggccg gcgtgcgcgc cgacgccgtg cgcttccggg
      541 tgggcgaccg cctggtgagc ggcacgaacc ccgacgactc cggcgaccgc accctgcacg
      601 cggtgagccc cgcgctgggg gtggtctggc gcgccgcccc cctcgcgtcg gcctacgcca
      661 ccctgtccac cagcttcgag acccccacca ccacggagct gggcaacaag cccgacggct
      721 ccgccggcat caaccccgac ctccagccgc agcgcaccgt ggcgctggag gtggggacga
      781 aggggctgct cccgacgctc ggcgtgcagt gggacgtggc gctgttcgag gcgcgggccc
      841 gcgacgagct cgtgccgttc gacatccccg gcggcgcggg gcgccgctac ttccgcaacg
      901 ccggacgcac gctgcgccgc ggcggcgagg tgggcgtgca gggggagtcg gggccgctca
      961 ccctgcaggc cgcctatacg tactcgcgct tccgctacga ggactacacg gtgggcacca
     1021 cgtcgtacgc cggccgccgc atcccgggga tccccgagca cgcgctcgcc ctcgccgtcg
     1081 ccctgcggtt cggctcggcg acgctcgcct ccacgaccga cgtcgccagc gcgatggagg
     1141 tggacgacgc caacagcgcg caggcgccgg cacgaacgat cgtcgggctg gcgctgtcca
     1201 acagggtgga gctggcgggg gtgagcgtct cgcccctcgt ggcggtccag aacctgggcg
     1261 gggtgcgctc cgtagggtcg gtgagcgtga acgccaccgg ggggaagtac ttcgagccgg
     1321 cgccgggccg gacgctgctc gtgcgagtcg ccctcggccg cgcggggtac tgaccggggt
     1381 accacgtatc agcggctctt ccggcgccgc ggtggcgttt ctgctgcagg agtagtctct
     1441 ctccggtccg cacgatgtcg cttcgctccc tcacccagcc catgacgcct ccgccgttcc
     1501 ctcaccggct cgtgctggtc gtgctcgcga tgggggttct cggctgccgg ccggctggcg
     1561 tggcggagcc ggaggtggac gccgcagcga tcgtggaggg ggacgcggcg cccggcgtgc
     1621 acaccgacac catcgaggac gccttcaccg tgcgcatcga ccgcgcgcgg tggtcggcgc
     1681 gcaaccgcac cgagacgcgt ggcgagttct gggacgccat cgccgtgctc gacgtgccgg
     1741 cggcggagcg ggccgcgaag tcggtggacc agaagacctt cgtgctcgcg ctgcgcacgc
     1801 tgatgtcgag cgaccccgac ggggcggcga tcgcgttcaa cgcgctgcac acccaggcca
     1861 ccgatcccgc cgtgcgggcg cgggcgcggg tggggctcac gatggcgctg tcgtggcgct
     1921 ccgactggca ggcgctcgcg cggatcggcc acgaccccga cagcatcgcg gcgcagctcg
     1981 agtcgcccgt ggtgcaggcg ggggtggagc ggtgggcccg cgccctcgcc gccgccccca
     2041 cccccgaggt gttcgtgccg gaggagtcgg tgacgctgcc gatgcgccgc agcgcgttcg
     2101 gcacgccggt gatcacggtg cgcatcaacg gccgcccgta cgagttctgg ctcgacaccg
     2161 gcgcgagcat gacgctcctg tcggcgcagg tcgcgatcga gtccggcgtc ttcctcgcgg
     2221 cgcccgacac cctcgccctg ggagtggtgg ccggccacat cccggcgcgc gcggtgatca
     2281 tcgactccct ggcgctcggc ccggtgatgg cgcgcgggct cagcgccgcc gtggtgaacc
     2341 cgggcgcgtt gcggctcgac cgcagccagc gcagcggcat cgtggaagcc gtgcagatcg
     2401 acggcgtcat cggcaccgac ctgctgcgtc atctcgacgt cgtgctcgac gccggcgccg
     2461 gctccatcac gatccggcgt ccccgcaccg acgtgcgcgc cccgcgcaac ctgttctggg
     2521 tgggctaccc ggtggtgaag ctcgtcacgc gcgaggggcg cccggtgctg ttcgggctcg
     2581 acaccggtgc cgaggggacc ttcgtgacga cggcgctcct ccggaagctg ccgcgcacgc
     2641 cgatcgccgc gcgccttatg accctgggcg ggctgggcaa ggagaaggag cgcacgcagt
     2701 gggtggcgcg caccatcgcg ctcagcgacg gcgactacgc catcacgctg cggaacacgc
     2761 ccatcacccc ggcccgccac tggaccttcg tgacgttcga cggcgtgatc ggcagcgacg
     2821 tggcgctggc gagccggatg cacctggact tcgcgaacgg cgtcttcgac gtgcggccca
     2881 gcgcggcgcg gccggacgcc ggccccacgg tcacggtgtc gccgtgaccg tgggcgtccc
     2941 gcgccgctag cgcgcggcgg ggccgcgcgg caggcgctcg ggcatctccg ccagcacgta
     3001 cgcgtacacc gccatcgtcg ccacgcaccg cgccacgtcg gcggggtcga gcttgtccgg
     3061 agtgtccgcg tcggagtggt ggtaccagaa gtagcgcgtg ccgtccacgt gcaggccggc
     3121 gcccggcacc cccgccgcga gcagcggccc gatgtcggct tcgcccccgc cccgcaccac
     3181 cgagtcggcg ccgatgcgtg ccagcagggg agcgatgcgg cgcagcatcg ccagcgccga
     3241 gtcggtgccc accgccgcga tgccgtacgg gcggaagacg ccgttgtccg actcgagcgc
     3301 gaacacgtgc cgcgcggggt cgtgggcgtt gcggtaggcc gtgcccccgc gcgtgccgtt
     3361 ctcctcgttc gtccacccca ccacgcgcac cgtgcgccgc gggcgcaggc cgagctgctt
     3421 catcaggcgc accgcctccc acgccgccac cacgcccccc gcgtcgtcca tcgccccctg
     3481 ccccacgtcc cacgagtcga tgtggccgcc caggacgacc acctcgtcgg gcagctcgcg
     3541 gccgcggatc tcggccacca cgttgcgcga gggcgcgtcg ggcagcgtgc gcgcgttcat
     3601 cacgaggtgc accgtgggcg tcaccccgcg gctctgcatt cggtgcagga gcatcgcgtc
     3661 ctccaccgtg atcgccgcgg cggggatggg cgcgaccgtc gtgtcgcgcc gcatgccgcc
     3721 ggtgtggggc gagttcatgg agaacgacgc gaccgatcgc agcagcatcg ccaccgcgcc
     3781 ggcgcgcgac gccgccgccg cgcccgcgcc gcggtacgca acggtctgtc cgtagtccgt
     3841 gaaggggacg tcgaacagca cgatcttccc gcgcgcctcg gcggcgcgcg cccggagatc
     3901 gtcgaagctc gtgacgacga gcaccggcgc cgtgatgccg ccggccggcg tggccgtgct
     3961 gccacccagc ccgagcatcg ccagcttctt gcggcgcggc gcgagcagct cggccgactc
     4021 ctcgccgcgc acccagtgcg gctccatcac cggctcgccc cgcacgttct ccagcccttc
     4081 cgtgcgcatc cggtcgagca tccagtcgat cgcgcgctcc agcggctcgg agccgctgag
     4141 ccggtggccg aaggtgtcgg tgagctcggc gatgcggttc caggcggcgc tgtccttcat
     4201 cgccgcgtcg atcaggcggt cggccgccgg ccggtaggcg gcggcgtcct gcgccgcgac
     4261 ggtggccggg
//
LOCUS       DASSYW010000872         2104 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_769535, whole genome shotgun sequence.
ACCESSION   DASSYW010000872 DASSYW010000000
VERSION     DASSYW010000872.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2104)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2104)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2104
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_769535"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(189..737)
                     /gene="hslV"
                     /locus_tag="VFN38_13835"
     CDS             complement(189..737)
                     /gene="hslV"
                     /locus_tag="VFN38_13835"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004298 - threonine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0051603 - proteolysis involved in protein
                     catabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HET9012900.1"
                     /translation="MSELPRIRATTILAVRRNGKVALGGDGQVTVGETVMKSTANKVR
                     MIGEGKLLAGFAGSAADALTLFEKFEEKLQRYPGNVPRAAVELAKEWRSDRVLRRLEA
                     LLVVADARHGFVISGNGELIEPDDGILAIGSGGSYALAAARALAANTDLEPVEIVRRA
                     LTIAGEICVYTNTNITVLEPTG"
     gene            complement(747..1148)
                     /locus_tag="VFN38_13840"
     CDS             complement(747..1148)
                     /locus_tag="VFN38_13840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012901.1"
                     /translation="MRIEVIPLIVGILIGLVGLGLLADAWIPEDAVPFRERRRRPRTE
                     RSLGGEAMIGLGVLCMAAAVISRDSWDYVNVAIIAGVVLLVIGAWMNRRYLRDRVVHR
                     GALRRGEEGEGAGGIGKHEKDAPPPPRRRIR"
     gene            complement(1191..>2104)
                     /locus_tag="VFN38_13845"
     CDS             complement(1191..>2104)
                     /locus_tag="VFN38_13845"
                     /inference="COORDINATES: protein motif:HMM:NF001399.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tyrosine recombinase"
                     /protein_id="HET9012902.1"
                     /translation="PDVAEYLRHLAKERDVSPHTVTAYRRDLMDFVEFLGGYYGTDGW
                     SWEGVDRLAMRGFLAHLSRRGVGKRTMARTLSGVRSFYRWMHRNEMVESNPARAVGAP
                     RQDKHLPGYLDRAQIDLLFQLAEARALEGGFVDVRNLAILELFYSTGMRLSELQGLAR
                     GDLDLVSQQVKVRGKGRKERIIPVGDHAQLALRNYEAKRDDLLRQVGARGERSAYFLS
                     RTGRRIGVRMVQKVVSGFLEQVDEDAGLSVHSLRHTFATHLLDAGADLRAVQELLGHA
                     SISTTQIYTHTSVERLKQVYQKAHPRA"
BASE COUNT          301 a          745 c          752 g          306 t
ORIGIN      
        1 agaaggtgaa ctaccgcgga tccacgcgga gaaaggcagc acctcgaatc gggctgttcc
       61 ccaatcagtc gaatggcgac gcgctcggcc ggtttcgcac accccgcgaa catccgcggt
      121 agttcacctt ctgcgatgat ccgcgtgcgc gcactcgtcg agcggcgacc acgcgtgcca
      181 cgcgaccctc agcccgtcgg ttccagcacc gtgatgttgg tgttcgtgta cacgcagatc
      241 tcgccggcga tggtgagggc gcggcggacg atctccacgg gctcgaggtc ggtgttggcg
      301 gccagggcgc gcgcggcggc cagggcgtac gagccgcccg agccgatggc gaggatcccg
      361 tcgtccggct cgatcagctc gccgttgccg gagatgacga agccgtggcg cgcgtcggcg
      421 acgacgagca gcgcctcgag ccggcgcagg acgcggtcgc tgcgccactc cttggccagc
      481 tccaccgcgg cgcgcgggac gttgcccggg tagcgctgga gcttctcctc gaacttctcg
      541 aacagggtga gggcgtcggc ggccgagccg gcgaagccgg cgaggagctt cccctcgccg
      601 atcatccgca ccttgttggc cgtggacttc atcacggtct cgccgacggt cacctggccg
      661 tcgccgccca gcgccacctt gccattgcgc cgcacggcca ggatggtcgt ggcgcggatc
      721 cgcgggagtt ccgacatggc cgaaagctag cggatccgcc ggcggggggg cggcggggcg
      781 tccttctcgt gcttcccgat tccccccgcc ccctctccct cctcgccccg ccgcagcgcc
      841 ccgcggtgca cgacgcggtc gcgcaggtag cgccggttca tccaggcgcc gatcaccagc
      901 agcaccacgc cggcgatgat ggcgacgttc acgtagtccc agctgtcgcg gctgatgacg
      961 gcggcggcca tgcacagcac gcccagcccg atcatcgcct cgcccccgag gctgcgctcg
     1021 gtgcgcgggc ggcgccgccg ctcgcggaag gggacggcgt cctcggggat ccaggcgtcg
     1081 gccagcaggc cgaggcccac gaggccgatg aggatcccga cgatcagcgg aatgacttcg
     1141 atgcgcacca gcgagctccg gatcgggacg ggggcgacct caagcgatct tcatgcccgg
     1201 gggtgggcct tctggtagac ctgcttcaac cgctccacgc tggtatgggt gtagatctgg
     1261 gtggtggaga tggacgcgtg gcccagcagc tcctgcacgg cgcgcaggtc ggcgccggcg
     1321 tccagcaggt gggtggcgaa ggtgtggcgg agcgagtgca ccgacaagcc ggcgtcctcg
     1381 tccacctgct cgaggaagcc ggagacgacc ttctgcacca tgcgcacccc gatccgccgg
     1441 ccggtgcggg agaggaagta cgccgaccgc tcgccgcgcg cgcccacctg gcgcaggagg
     1501 tcgtcgcgct tcgcctcgta gttgcgcagg gcgagctggg cgtggtcgcc caccgggatg
     1561 atgcgctcct tccgcccctt gccgcgcacc ttcacctgct ggctcacgag atcgaggtcg
     1621 ccgcgggcga ggccctggag ctccgacagg cgcatgccgg tgctgtagaa cagctcgagg
     1681 atggcgaggt tgcgcacgtc cacgaacccg ccctccaggg cgcgcgcctc ggcgagctgg
     1741 aacaggaggt cgatctgcgc gcggtcgaga tagccgggca ggtgcttgtc ctgccgcggc
     1801 gcccccacgg cgcgcgccgg gttggactcc accatctcgt tgcggtgcat ccaccggtag
     1861 aagctgcgca cgccggagag ggtgcgcgcc atcgtccgct tccccacccc gcgccgcgag
     1921 aggtgcgcga ggaagccgcg catcgccagc cggtccaccc cctcccagct ccagccgtcg
     1981 gtgccgtagt agccgccgag gaactccacg aagtccatga ggtcgcggcg gtacgccgtg
     2041 acggtatggg gcgagacgtc gcgctccttg gcgaggtggc ggagatactc ggcgacgtcc
     2101 ggtg
//
LOCUS       DASSYW010000873         2128 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1693002, whole genome shotgun sequence.
ACCESSION   DASSYW010000873 DASSYW010000000
VERSION     DASSYW010000873.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2128)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2128)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2128
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1693002"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..380
                     /locus_tag="VFN38_13850"
     CDS             <1..380
                     /locus_tag="VFN38_13850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012903.1"
                     /translation="ATPPERLRAAGLSAAKTAALRDLAERSLDGTVPTMRRVRLMDDE
                     DVIERLVQVRGVGRWTAEMLLMFRLGRADVLPVSDLGIRKGFALTFGNRSLPAAITIE
                     RRAERWRPYRSVACWYLWRALEQ"
     gene            393..866
                     /locus_tag="VFN38_13855"
     CDS             393..866
                     /locus_tag="VFN38_13855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012904.1"
                     /translation="MSETTQKIGGYEPSVRTVEMVCDRLAELGLAIGPDTARTLVREV
                     LAAEGPRIDARLREAIDTALQTIKVAAQSAMGLLAASAGEARAKEPQPAPEQLHVSRR
                     PPPPQPQAAQQAARKTAPPPPEPKRAEPRPSGPRRPKVDYEDEERRPMFRRPGRR"
     gene            866..>2128
                     /locus_tag="VFN38_13860"
     CDS             866..>2128
                     /locus_tag="VFN38_13860"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HET9012905.1"
                     /translation="MLLHRIWDPKLAQASYLIGCTEAREALVIDPNRDVDQYLALAAS
                     LQLRIAHVTETHIHADFCSGARELAARAKAKLYLSDEGGDEWRYAFAASDGAVLLHDG
                     DRFTIGNVSVQALHTPGHTPEHLIFLVTDGAAATEPIAAVTGDFVFVGDVGRPDLLER
                     AAGVGGTMDAAARTLFRSLQRFKLQPDWLQIWPGHGAGSACGKGLSAIPHSTVGYERR
                     FNWAFSVNDEAEFGRMVLAGQPEPPKYFGTMKRLNREGPRLLGGLPRPVPVEPEKVIE
                     VMEAGGLVIDTRTGAEYASGHIPGTINIPFNNAFTTWAGWVVPYDRDVYLLSAKADGR
                     QAEGALRDLAMIGLDRVAGCFGAEALGAWTGAGRALATIPRITARDLAERLEKKTAAV
                     VDVRSRAEWEAGHIPGVPNIPAGEIADRI"
BASE COUNT          328 a          753 c          770 g          277 t
ORIGIN      
        1 tcgccacccc gccggaacgg ctccgcgccg caggactctc ggccgcgaag accgccgcgc
       61 tgcgcgatct cgcggagcgg agcctggatg gcaccgtgcc gacgatgcgc agagtacggc
      121 tgatggacga tgaggacgtc atcgagcggc tggtgcaggt ccgcggtgtc ggacgctgga
      181 ccgcggagat gctgctcatg ttccgcctcg gccgcgcgga tgtgctgccg gtgagcgacc
      241 tcgggattcg caagggattc gcgctcacct tcggcaaccg cagccttccg gccgccatca
      301 ccatcgagcg ccgcgccgag cgctggcgcc cctaccgctc cgtcgcgtgc tggtacctgt
      361 ggcgcgcgct ggagcagtga cccggaggga cgatgagcga gacgacgcag aagatcggcg
      421 gctacgagcc gagcgtccgc acggtggaga tggtctgcga ccgcctggcg gagctggggc
      481 tggcgatagg gcccgacacc gcgcggacgc tggtgcgcga ggtgcttgcg gccgaaggac
      541 cccggatcga tgcgcggctc cgggaagcga tcgataccgc gctgcagacg atcaaggtgg
      601 cggcccagtc ggcgatgggg ctgctcgctg ccagcgccgg cgaggcgcgc gccaaggagc
      661 cgcagccggc gcccgagcag ctgcacgtat cccgccgccc gcctccaccc cagccacagg
      721 ccgcccagca ggccgcgcgg aagaccgcac cgccgccgcc ggagcccaag cgcgcggagc
      781 cgaggccctc gggcccacgc cggccgaagg tggactacga ggatgaagag cggcgtccca
      841 tgttcaggcg gccgggtcgc cgctagtgct gctgcaccgg atctgggacc ccaagctcgc
      901 ccaggcgagc tacctcatcg ggtgtaccga ggcgagggaa gcgctcgtca tcgaccccaa
      961 ccgggacgtc gaccagtacc tcgccctcgc cgcttcgctc caacttcgca tcgcccacgt
     1021 caccgagacc cacattcacg ccgacttctg ctccggggcc cgcgagctgg cggcccgcgc
     1081 caaggcgaag ctctacctct cggacgaggg cggtgacgag tggcgctacg cgttcgccgc
     1141 gtcggacggc gcggtgctgc tgcacgacgg cgatcgcttt accatcggta acgtctcggt
     1201 ccaggcgctc cataccccgg ggcatacgcc ggagcatctc attttcctgg tgaccgatgg
     1261 agccgcggcc acggagccga tcgccgccgt caccggcgac ttcgtcttcg tgggcgacgt
     1321 gggccgcccc gacctgctcg agcgcgcggc cggtgtcggc ggtacgatgg acgccgcggc
     1381 gaggacgctc ttccgcagcc tccagcgttt caagctccag cccgactggc tccagatctg
     1441 gcccggccac ggcgcgggct cggcgtgtgg gaagggactg agcgcgatcc cccacagcac
     1501 cgtcggctac gagcggcggt tcaactgggc gttcagcgtg aacgacgagg ccgagttcgg
     1561 tcgcatggta ctggcgggac aaccggagcc gccgaagtac ttcggcacca tgaagcggct
     1621 caaccgcgag gggccgcgcc tgctcggcgg gctcccgcga ccggtgccgg tggagcccga
     1681 gaaggtgatc gaggtgatgg aggcgggcgg cctggtgatc gacacgcgca ccggggcgga
     1741 gtacgccagc gggcacatcc cggggacgat caacatcccc ttcaacaacg cgtttaccac
     1801 ctgggccggc tgggtcgtgc cgtacgaccg cgacgtctat ctcctctccg ccaaggccga
     1861 cgggcggcag gccgagggcg cgctgcgcga cctcgcgatg atcgggctcg accgggtggc
     1921 cgggtgcttc ggcgccgagg cgctcggcgc gtggaccggg gccggacgcg cgctcgccac
     1981 catcccgcgg atcaccgcca gggacctggc cgagcggctg gaaaagaaga cggccgcggt
     2041 ggtggacgtg cggagtcgcg ccgaatggga agcgggccac atccccggcg tacccaatat
     2101 cccggcggga gaaatcgccg accggatc
//
LOCUS       DASSYW010000874         3710 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1592600, whole genome shotgun sequence.
ACCESSION   DASSYW010000874 DASSYW010000000
VERSION     DASSYW010000874.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3710)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3710)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3710
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1592600"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..676
                     /locus_tag="VFN38_13865"
     CDS             <1..676
                     /locus_tag="VFN38_13865"
                     /inference="COORDINATES: protein motif:HMM:NF013918.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase
                     heme-binding subunit MsrQ"
                     /protein_id="HET9012906.1"
                     /translation="AEELLTSRSKLLLHPAVRAIVFALCLIPAAHLTLDWLAELGLLD
                     AWRSSLGADQIRDTEIRTGLWTLRFLAITLAVTPARQLLGLGALAKYRRSFGLFAFFY
                     ACVHLATWSWADTNFDLPFMWKEIRKHKYILVGMLTFLLLLPLAITSTKGWIKRLGGR
                     RWNRLHRLIYAAAVTGTVHYLWAVKKDTLFPVVYFIVFALLLGYRVARAAREREAWSL
                     RPRRAA"
     gene            673..1824
                     /locus_tag="VFN38_13870"
     CDS             673..1824
                     /locus_tag="VFN38_13870"
                     /inference="COORDINATES: protein motif:HMM:NF013347.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012907.1"
                     /translation="MTLELECFAIVAPGLEILALAEARALGLPAELQAGGGGITWRGD
                     LRGVLLANAGLRIASRVVVRLATFEARSFAELERHARQIPWSSVMSREGSARFRVTCK
                     KSKLYHSDAVAQRLADALTRAVPGARAAGGSGTEEEAETADDAQLFVVRMLRDVCTVS
                     ADTSGALLHRRGYRQATAKAPLRETIAAALLAASGWDGRHPLVDPLCGSGTIPIEAAL
                     LARGLPPGGRRHFAAERWPGVSRELGDRVRRELNERARADAPARIAGSDRDAGAIDAS
                     RGNAERAGVPGDVELSVRSLSAIEFPAAPRGWVVSNPPYGVRVGDADRVRDLWAQLGN
                     VLRERAGGWRVALLSPDPALERQLRIPLTVVAQTTNGGIPVRLVVGEVA"
     gene            1824..2303
                     /locus_tag="VFN38_13875"
     CDS             1824..2303
                     /locus_tag="VFN38_13875"
                     /inference="COORDINATES: protein motif:HMM:NF015438.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030151 - molybdenum ion binding [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MOSC domain-containing protein"
                     /protein_id="HET9012908.1"
                     /translation="MAVGATRTAWVTGLQRSSGGVPKLPVDRAVVRVGGMEGDRQANR
                     KYHGGPDRALCLYAQERLDALADDGHPLSRGTLGENVTIAGLAWQDVRPGARLVMGGV
                     EVEVTGFAAPCRQIAQGFADGVFSRVGEKVNPGWSRVYARVLVEGEVAVGDPVTLRT"
     gene            2660..>3710
                     /locus_tag="VFN38_13880"
     CDS             2660..>3710
                     /locus_tag="VFN38_13880"
                     /inference="COORDINATES: protein motif:HMM:NF039196.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HET9012909.1"
                     /translation="MTDEMDAMEEMPDRGGVATAAGGNGGDGGIPRERAMRRLLAGLR
                     AIDAGDFTVRLEPVGDPLMAEIADIFNSVATKQGRLADELNRVALSVGREGKMRDRAT
                     IGPAGGLWAGSVDALNSLITDLVQPTSEVARVIKAVAEGDLSQKVELEIEGKTVQGEF
                     FRIGSTVNRMVDQLNAFASEVTRVAREVGTEGRLGGQANVQGVSGTWRDLTDSVNSMA
                     SNLTSQVRNIADVTTAVAKGDLSRKITAEAKGEVLELKNTVNTMVDQLNAFAAEVTRV
                     AREVGTEGVLGGQANVPGVAGTWKDLTDSVNGMASNLTSQVRNIADVTTAVAKGDLSK
                     KITAEAKGEMLELKTT"
BASE COUNT          563 a         1153 c         1420 g          574 t
ORIGIN      
        1 tgcggaggaa cttctgacct cgcggtccaa gctcctgctc caccccgccg ttcgcgcgat
       61 cgtcttcgct ctctgcctga ttcccgcggc gcatctcacg ctcgactggc tcgcggagct
      121 gggcctgctc gacgcgtggc gcagctcgct cggcgcggac cagatccgtg acaccgagat
      181 ccgcaccggg ttgtggacgc tgcgcttcct ggcaatcacg ctggcggtga cgccggcgcg
      241 gcagctcctg ggcctgggcg cgctggcgaa gtaccggcgt agcttcggcc tgttcgcctt
      301 cttctacgca tgcgtgcacc tcgccacctg gtcgtgggcc gacaccaact tcgaccttcc
      361 cttcatgtgg aaggagatcc ggaagcacaa atacatcctg gtggggatgc tcaccttcct
      421 gctgctgctt ccgctggcga tcacgtcgac caaggggtgg atcaagcggc tgggcggcag
      481 gcggtggaac cgcctgcatc gcctgatcta cgcggcggcc gtcacgggca cggtgcacta
      541 cctgtgggcg gtgaagaagg acacgctctt tcccgtcgtg tacttcatcg tgttcgcgct
      601 gctgctcggg tatcgcgtgg cgcgcgcggc gcgtgagcgc gaggcgtgga gcctccgacc
      661 gcgccgagcc gcatgacgct cgagctcgag tgcttcgcca tcgtggctcc cggactcgag
      721 attctggcgc tcgccgaagc ccgggcgttg gggctgccgg ccgagctcca ggcgggcggc
      781 ggcggcatca cgtggcgggg cgatctccgc ggcgtactgc tcgccaacgc cgggctgcgg
      841 atcgcgtcgc gcgtcgtcgt gcgcctggcg acgttcgaag cgaggtcgtt cgccgagctc
      901 gagcgtcacg cccggcagat tccgtggagc agcgtcatgt cgcgcgaagg ctcggcgcgc
      961 ttccgggtca cctgcaagaa gtcgaagctc taccactcgg acgcggtggc gcagcggctc
     1021 gccgacgcgc tgacgcgcgc cgtgcccggc gcccgcgcag caggggggag cggcacggag
     1081 gaggaagcgg aaacggcgga cgatgcgcag ctgttcgtcg tgcggatgct gcgcgacgtg
     1141 tgcaccgtga gcgccgacac gtcgggagcg ctgctccacc ggcgcggcta ccgccaggcg
     1201 acggcaaagg caccgcttcg ggagacgatc gccgcggcgc tgctcgccgc gtcggggtgg
     1261 gacggcaggc acccgctcgt ggatccgctc tgcggctcgg ggaccattcc aatcgaggcc
     1321 gcgctgctcg cgcgcgggct gccgccggga gggcgtcggc acttcgccgc cgagcggtgg
     1381 cccggcgtct cgcgcgagct gggtgatcgg gtgcggaggg agctgaacga gcgggcgcgg
     1441 gcggatgcgc cggcgcggat tgccggttcc gatcgcgatg ccggcgcgat cgacgcctca
     1501 cgcgggaacg ccgagcgtgc cggcgtgccg ggcgacgtgg agctgtccgt gcgatcgctg
     1561 tcggcgatcg agtttccggc cgcgccgcgc gggtgggtcg tgagcaatcc tccatacggc
     1621 gtccgggtgg gcgatgccga tcgcgtgcgc gacctgtggg cgcagctcgg gaacgtgctg
     1681 cgggagcggg cggggggctg gcgcgtcgcg ctcctgtctc ccgacccggc gctggagcgc
     1741 cagctgcgga ttccgctgac ggtggtggcg cagaccacga atggaggcat tccggttcga
     1801 ctcgtcgtcg gtgaggttgc ctgatggcgg tgggtgcgac gaggaccgcg tgggtcacgg
     1861 gactgcagcg ttcctccggc ggtgtgccga aactcccggt cgaccgcgcg gtggtgcgcg
     1921 tgggcgggat ggagggggac cgacaggcca accggaagta ccacggcggg cccgatcgtg
     1981 cgctctgcct ctatgcgcag gagcggctcg acgcgctcgc ggacgatggg catcccctgt
     2041 ctcgcgggac gctgggggaa aacgtcacga ttgccgggct cgcctggcag gacgtgcgtc
     2101 cgggcgctcg actggtgatg ggcggggtgg aggtggaggt gaccggcttc gccgcgccgt
     2161 gccgacagat cgctcaggga ttcgcggacg gcgtcttttc gcgggtcggc gagaaggtga
     2221 atcccggatg gagccgcgtg tacgcacgcg tgctcgtgga aggcgaggtc gcggtaggcg
     2281 atccggtgac cctgcgcaca tgacatatca atatcaattg tttgtcatag agcgtgcttc
     2341 ttgcagtatt caccctgttc ggcattccaa gcccgtgtga tgcgccgtgt ttcaacggac
     2401 gagcccggca cgccacttga aatacggcgt ccccgagctc gttcgcagcc tggacccacc
     2461 gaaatgccaa gccaccgccc aatgccggtg gcctttcgta tcctctcttc cctcatagga
     2521 gctgaccgtg agcgtcggcg agagacccga agtgactgat gaatcgaaga cgcccggtgc
     2581 tgggcgtggg aatggtcgat cgaacgccgg ggccgcgcga ggcaagcgcg gccgtccgcg
     2641 tcgtgcagca gcctccgcga tgaccgacga gatggacgcg atggaggaga tgccggatcg
     2701 gggaggcgtg gcgaccgcgg cgggggggaa cggcggtgac gggggcattc cccgcgaacg
     2761 ggcgatgcgg cggctgctgg ctgggctgcg cgcgatcgac gcgggcgact tcacggtgcg
     2821 actggagccg gtcggcgatc cgctcatggc ggagatcgcg gacatcttca acagtgtggc
     2881 gaccaagcag ggtcgcctgg cggacgagct gaaccgcgtt gcgctctcgg tgggtcgcga
     2941 ggggaagatg cgcgaccgcg cgacgatcgg accggctggt gggctgtggg ccggctccgt
     3001 ggacgcgctg aactcgctca tcaccgatct cgtgcagccg acgtcggaag tcgcgcgcgt
     3061 gatcaaggcg gtcgccgagg gcgacctgag ccagaaggtg gagctcgaga tcgaaggcaa
     3121 gacggtgcag ggcgagttct tccgcatcgg ttcgaccgtg aatcggatgg tcgaccagct
     3181 caacgccttc gcgagtgaag tgacgcgcgt ggcgcgagag gtgggtacgg aagggcggct
     3241 gggtgggcag gcgaacgtgc agggggtcag cggcacctgg cgcgatctca ccgactcggt
     3301 gaactcgatg gcgtcgaacc tgacgagtca ggtgcgcaac atcgccgacg tgaccacggc
     3361 ggtggcgaag ggagacctga gccgcaagat cacggcggag gcgaagggcg aggtgctcga
     3421 gctgaagaac accgtgaaca ccatggtgga ccagctgaac gccttcgccg ccgaggtgac
     3481 ccgcgtggcg cgcgaggtgg gaacggaagg cgtgctgggt gggcaggcca acgtgcccgg
     3541 cgtggccggc acgtggaagg acctcaccga cagcgtgaac gggatggcga gcaacctgac
     3601 cagtcaggtg cgaaacatcg ccgacgtgac gacggcggtg gcgaagggcg acctgtcgaa
     3661 gaagatcacc gccgaggcga agggggaaat gctggagctg aagaccaccg
//
LOCUS       DASSYW010000875         2214 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_709978, whole genome shotgun sequence.
ACCESSION   DASSYW010000875 DASSYW010000000
VERSION     DASSYW010000875.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2214)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2214)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2214
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_709978"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..260)
                     /locus_tag="VFN38_13885"
     CDS             complement(<1..260)
                     /locus_tag="VFN38_13885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HET9012910.1"
                     /translation="MAPQFIYVMKALRKVVPPSRVILDDIWLSFYPGAKIGVLGANGA
                     GKSSLLRIMAGVDQDFQGEAWAAKGTKIGYLSQEPKLDPSKNV"
     gene            complement(364..1164)
                     /locus_tag="VFN38_13890"
     CDS             complement(364..1164)
                     /locus_tag="VFN38_13890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012911.1"
                     /translation="MLITALHRPQRTVRLRYAVGLVAGAAALLALAARMGGAQTMAHA
                     AETPRAPSVREHTSGANAALHMEMTPALPATAADSARAAKVAATLRTAIAKYADTTAA
                     VADGYHMFLPAIRDQKVYHFTNNWRAVQESFRFEPSRPTSLLYKRDSTGKLVLTGAMY
                     TAPKRFGYDRLNARVPLSIARWHKHVNWCLPGRGETARWTERRDGAPLFGPESPIATK
                     AACDAVGGRFEPAVFGWMLHANVFAGDDPALVWGEQHAGHGGMGMDGM"
     gene            1390..2097
                     /locus_tag="VFN38_13895"
     CDS             1390..2097
                     /locus_tag="VFN38_13895"
                     /inference="COORDINATES: protein motif:HMM:NF014713.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcdA"
                     /protein_id="HET9012912.1"
                     /translation="MSDLSQLLSGNPALALPALFLGGVLTSLTPCVYPMIPITAAIVG
                     GQTAGQPVSRMRPVLLTLTYVVGLAMVYSALGVFAGLTGTLFGSVSTNPWLYFAMANV
                     LVLAALGMLDVVPIRLPAGIMARAATMGTAGRFSGAFLMGAMSGLVAAPCSAPVMAAV
                     LTWVAVTHSAALGFVYLLTFSLGMCTLLVVVGLSTGSLARLPRAGAWMVTVKRLFALV
                     MLGAAEYYLVKMGQLLI"
BASE COUNT          281 a          822 c          748 g          363 t
ORIGIN      
        1 acgttcttgc tcgggtcgag cttcggctcc tgcgacaggt agccgatctt cgtccccttg
       61 gcggcccacg cctccccctg aaaatcctgg tcgacgccgg ccatgatgcg cagcagcgac
      121 gacttgcccg cgccgttggc gccgaggacg ccgatcttcg cgccgggata gaacgagagc
      181 cagatgtcgt cgagaatgac ccgggacggc ggaacgacct tccgcagggc cttcatgacg
      241 tagatgaact ggggagccac gactgtccgc ttgtgctggt gaataacgaa aggcgcgccc
      301 accgggcgcg cctcgcaatc taacactctc ggggatgggc tctccgcccg gccggccgga
      361 cgcctacatc ccgtccatcc ccatgccacc gtgccccgca tgctgctccc cccacacgag
      421 cgccggatcg tcccccgcga acacgttggc gtggagcatc cagccgaaca cggccggctc
      481 gaatcgcccg cccaccgcgt cgcacgccgc cttcgtcgcg atcgggctct cggggccgaa
      541 caggggggcg ccgtcgcgcc gctccgtcca gcgcgcggtc tccccgcggc cgggcaggca
      601 ccagttcacg tgcttgtgcc accgcgcgat ggacagcggc acccgggcgt tcagccggtc
      661 gtagccgaac cgcttgggcg cggtgtacat cgccccggtc agcaccagct tccccgtcga
      721 gtccctcttg tatagaaggg aggtgggtcg cgagggctcg aagcggaagg actcctgcac
      781 cgcgcgccag ttgttggtga agtggtagac cttctggtcc ctgatcgccg gcaggaacat
      841 gtggtagccg tcggccaccg cggcggtggt gtcggcgtac ttcgcgatcg cggtccgcag
      901 ggtggcggcc accttcgcgg cgcgggccga gtcggccgcg gtggccggga gcgcgggggt
      961 catctccatg tggagggcgg cgttggcccc cgacgtgtgc tcccgcaccg agggggcgcg
     1021 gggcgtttcg gccgcgtggg ccatggtctg cgcgccgccc atccgcgcgg ccagggcgag
     1081 gagcgccgcc gcgccggcca cgaggccgac ggcgtagcgc agccgaacgg tgcgctgggg
     1141 ccggtgcagt gcggtgatca acatgggtct ccgggtggac gtccgactct tcctgtcaga
     1201 cgaccgtccc ccccgaccgt taacagccga gcccggctag ggcatccgct acggccggcg
     1261 ccggacgtac cgtccgccgg ctccagcttg cccggatacc tcccaccatc caccgttcac
     1321 ggttcgcaga caccgttcac cgatcaccgt tcaccgttca cactctcccc cccggatctc
     1381 tcgcccgccg tgtccgacct ctcccagctc ctgagcggca accccgccct cgccctcccg
     1441 gcgctcttcc tgggcggggt gctcacgagc ctcaccccct gcgtctaccc gatgatcccg
     1501 atcacggcgg ccatcgtggg ggggcagacg gcggggcagc cggtgtcgcg gatgcggccg
     1561 gtgctcctca ccctcaccta cgtggtgggg ctcgcgatgg tctactcggc gctcggggtg
     1621 ttcgccgggc tcacgggaac gctgttcggg agcgtcagca ccaacccgtg gctgtacttc
     1681 gccatggcca acgtgctcgt gctcgccgcc ctcggcatgc tggacgtcgt acccattcgc
     1741 ctccccgcgg gtatcatggc gcgggccgcg acgatgggca cggcggggcg cttctccggt
     1801 gcgttcctca tgggcgccat gtccggcctc gtggcggcgc cctgctccgc cccggtgatg
     1861 gccgcggtgc tgacgtgggt ggcggtcacc cacagcgccg cgctcggctt cgtctacctg
     1921 ctcaccttct cgctcggcat gtgcacgctg ctcgtcgtcg tcggcctctc cacggggtcg
     1981 ctggcgcggc tcccgcgtgc cggcgcgtgg atggtgacgg tgaagcggct gttcgcgctc
     2041 gtcatgctcg gcgccgccga gtactacctc gtgaagatgg gacaactgct catatgaaga
     2101 cggcgatgcg acgttcggcg ttcaccctga tcctctccac ggcggcattc ctggcgccgc
     2161 gcgcggcgcg cgcgcaggac agcggcctcc ccctcggcac gccggcaccg agcg
//
LOCUS       DASSYW010000876         2227 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_63662, whole genome shotgun sequence.
ACCESSION   DASSYW010000876 DASSYW010000000
VERSION     DASSYW010000876.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2227)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2227)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2227
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63662"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..231)
                     /locus_tag="VFN38_13900"
     CDS             complement(<1..231)
                     /locus_tag="VFN38_13900"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HET9012913.1"
                     /translation="MVKRTGRTALASPPRPAATDSGAGAAADADAEQRILDAAHKVFV
                     RRGTAGARMQEIADEAGVNKALLHYYFRNKSRL"
     gene            400..1302
                     /gene="gnd"
                     /locus_tag="VFN38_13905"
     CDS             400..1302
                     /gene="gnd"
                     /locus_tag="VFN38_13905"
                     /inference="COORDINATES: protein motif:HMM:TIGR00872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004616 - phosphogluconate dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="decarboxylating 6-phosphogluconate
                     dehydrogenase"
                     /protein_id="HET9012914.1"
                     /translation="MQLAMIGLGKMGGNMTARLMRDGHSVVVYDHHAENIAKYVALGA
                     KAATDLPNLTGQLGGPRIVWIMVPAGAPVDETITALLPGLKPGDIIIDGGNSNYKETR
                     ARAERLAAQKIAFIDAGTSGGIWGLENGYCLMVGGPPDAVKTCEPIFLSLAQKGGYMH
                     VGPAGSGHYVKMVHNGIEYGLLQAFAEGYEILAASSKYPDLDLHGIAELWQHGSVVRS
                     WLNELAVRAFEKDPKLDKLKGYVSDSGEGRWTVAEAIEEDVPAPVITLSLLMRLRSRQ
                     EDSFGGKVIAALRNEFGGHAVKGT"
     gene            1299..>2227
                     /locus_tag="VFN38_13910"
     CDS             1299..>2227
                     /locus_tag="VFN38_13910"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012691.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004345 - glucose-6-phosphate
                     dehydrogenase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HET9012915.1"
                     /translation="MTAPVAGHVRLTPKISGQFGIVPGAPAEQADPCTMVIFGATGDL
                     TKRKLFPALYQLAAEHLLHPNFAVLAVGREQKETDDTFRERIRGALVDSDEVKHFDDE
                     VWQRLAARTFYAGGDASDDSAYALIKRRLVEIEAERPNEERNRFFYLAVPPSVFEPIV
                     RHLSTSGLVPRHENPKERPWARVVVEKPFGHSLETAKQLNDLVLSLFAEHQLYRIDHY
                     LGKETVQNVLVFRFANSIFEPLWNRAHISHVQITAAEEVGVEARGKYYEEAGVVRDMF
                     QNHLLQLLALTAMEPPPSMTANAVRDEKVKVLKS"
BASE COUNT          375 a          704 c          811 g          337 t
ORIGIN      
        1 gaggcggctc ttgttgcgga agtagtagtg caggagcgcc ttgttcacgc cggcctcgtc
       61 ggcgatctcc tgcatgcggg cgcccgcggt gccgcggcga acgaagacct tgtgcgcggc
      121 gtcgaggatc cgctgctcgg cgtcggcatc ggccgcggcg ccggctcctg agtcggtggc
      181 ggcggggcgc ggcggggagg ccagggcggt gcggccggtt cgcttaacca tatggtttca
      241 ccgtttggtt aatagcaagt atagcactcc tggccgaccg cgcaaggcgg aggtgcggca
      301 cgggtggtgc gcgttggcgc gaaccattcg gccggcgtcg cccttaggtt gaggcgacgg
      361 caccgcgccg ccatgaaccc tgcacccaga gcgaaccaaa tgcagctcgc gatgatcgga
      421 ctcggcaaga tgggcggcaa catgacggcg cggctgatgc gcgacggtca ttccgtggtc
      481 gtctacgacc atcacgccga gaacatcgcc aagtacgtcg cgctcggagc caaggccgcg
      541 acggatctgc cgaacctcac cggacagctc ggtgggccac gcatcgtgtg gatcatggtg
      601 ccggccggcg cgccggtgga cgagacgatc accgcgctcc tgccggggct gaagccgggc
      661 gacatcatca tcgacggcgg caactccaac tacaaggaga cgcgcgcgcg cgccgagcgg
      721 ctcgcggcgc agaagattgc cttcatcgac gcgggcacga gcggcggcat ctgggggctg
      781 gagaacggct actgtctcat ggtcggcggc ccgccggacg ccgtgaagac ctgcgagccg
      841 atcttcctgt cgctggcgca gaaggggggc tacatgcacg tcggccccgc gggctcgggc
      901 cactacgtga agatggtgca caacggcatc gagtacgggt tgctccaggc gttcgccgag
      961 ggctacgaga tcctcgccgc gtcgagcaaa tatccggatc tggacctgca cgggatcgcc
     1021 gagctgtggc agcacggcag cgtcgtgcgg tcgtggctga acgagctggc ggtgcgcgcc
     1081 ttcgagaagg atcccaagct cgacaagctg aaaggctacg tgtccgactc gggtgaaggc
     1141 cggtggacgg tggcggaggc gatcgaggag gatgtgccgg cgccggtgat cacgctgtcg
     1201 ctgctgatgc gcctgcgctc gcggcaggag gactcgttcg gcggcaaggt gatcgccgcg
     1261 ctgcgcaacg agttcggcgg ccatgcggtg aagggcacgt gacggcgccc gtcgcggggc
     1321 acgtccgcct cacgccgaag atcagcgggc agttcggcat cgtgccggga gcgccggccg
     1381 agcaggcgga tccgtgcacg atggtgatct tcggcgccac gggcgacctc accaagcgca
     1441 agctgtttcc cgcgctctac cagctcgcgg cggagcatct gctgcacccc aacttcgccg
     1501 tgctcgcggt gggacgcgag cagaaggaga ccgacgacac cttccgcgag cgcatccgcg
     1561 gcgcgctggt ggactcggac gaggtgaagc acttcgacga cgaggtctgg cagcgcctgg
     1621 cggcgcggac cttctacgcg gggggcgacg cgagcgacga ctcggcctac gcgctgatca
     1681 agcggcgcct cgtggagatc gaggccgaac ggccgaacga ggagcgcaat cgcttcttct
     1741 atctcgcggt gccgccgagc gtgttcgagc cgatcgtgcg gcacctgtcg acgagcggtc
     1801 tcgtcccccg gcacgagaat ccgaaggaac ggccgtgggc gcgcgtggtg gtggagaagc
     1861 cgttcggcca cagcctcgag acggcgaagc agctgaacga tctcgtgctg tcgctgttcg
     1921 ccgagcacca gctctaccgg atcgatcact acctggggaa ggagacggtc cagaacgtcc
     1981 tcgtgttccg gttcgccaac tccatcttcg agcccctctg gaaccgcgcg cacatctcgc
     2041 acgtgcagat cacggcggcc gaggaggtcg gcgtggaggc gcgcggcaag tactacgagg
     2101 aagccggcgt ggtgcgggac atgttccaga accacctgct ccagctgctt gcgctcacgg
     2161 cgatggaacc gccgccgtcg atgacggcca atgcggtgcg cgacgagaag gtgaaggtgc
     2221 tcaagtc
//
LOCUS       DASSYW010000877         8365 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1684905, whole genome shotgun sequence.
ACCESSION   DASSYW010000877 DASSYW010000000
VERSION     DASSYW010000877.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 8365)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8365)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8365
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1684905"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..794)
                     /locus_tag="VFN38_13915"
     CDS             complement(<1..794)
                     /locus_tag="VFN38_13915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HET9012916.1"
                     /translation="MSARAPFAALLLAAAASAAAAQQQPRYDLLIAGGTVIDGTGAPR
                     YRADVAITGDRVVLVSRLAIPRSRAARVIDARGRVVAPGFIDLHAHLEPLAQLPGARS
                     AVTQGVTTALGGPDGSSPWPLAAYMAARDSQGIGINVAYLVGHNTVRSAVMGTANRAP
                     TDDELARMRAMVARGMGDGAFGLSTGLRYVPGTYSTIDEVVALAQAAADSGGIYTSHL
                     REEGLGLLEGVGEAIEIGRRAHVPVVLTHHKAVGQQMWGKSVVTLAL"
     gene            complement(791..1042)
                     /locus_tag="VFN38_13920"
     CDS             complement(791..1042)
                     /locus_tag="VFN38_13920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012917.1"
                     /translation="MSDRTDALLAELVELTRRQLANQEEALAGQRHSMEAQSGAIGLQ
                     REALERQRKGLRVVFTLIGVVLALIVVPYAYSWLRFLSR"
     gene            complement(1138..4362)
                     /locus_tag="VFN38_13925"
     CDS             complement(1138..4362)
                     /locus_tag="VFN38_13925"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HET9012918.1"
                     /translation="MTELRDQLQGTLGAAYTLERELGGGGMSRVFVATEKALGRSVVV
                     KVLPPDLAGGVNIDRFRREVRFAARLQHPHIVPLLTAGEMDGVPYYTMPFVEGQSLRA
                     RLSGAGALPLTEALGILRDVAKALAYAHAQGVVHRDIKPDNVLLSGGVAVVMDFGIAK
                     ALSSSTSATGRTSITMTGTSIGTPAYMAPEQAAADPATDHRADIYSFGCMAYELLTGQ
                     PPFFDVAPHKRLVAQISETPAPIAGFRPDVPAALEELVMRCLEKDPANRPQHAGEVTA
                     TLDSVVARHSAQLAVPSSVLVPVVLGKALMLYVASVIAVLLLARAATLWIGLPEWVVA
                     GALIVMGLGLPVVLLTAWVHYVTRRAASEPPAAPPRDGRVPRRSLAVLAERARPHVSW
                     SRNARGGLLALGAFVLVVSGFMTMRALGIGPPGSLLAAGRLSERDRLLVGDFRISGGD
                     SSLARVVAEAVRTGLGESPLFSTMSPAAISAALRRMQRAPTAWVDVDLAREIALREGA
                     KAVVTGDVNPLGQGYVVTVRLVSADSGAELASFHETADTPRELLPTVDKLTRQLRGKA
                     GESLRDVHADPPLEQVTTSSLDALRLYVEGSRANAAGADDSAIRALTAAIAVDTSFAM
                     AYRKLAASYNNAQYPRTMRDSALKKAYQYRDRLTERERGTLLGDYFTRGPGMDRGKGI
                     AAYEALLARYPYDAVAMNNLGNALETRREFARAESLFARLAAAEPRVPIYPQNLLGIL
                     VVEGKFAEARRVAEQLQRRFPNQGTYTTQLAALYYARGDADSALALVGRLRQSRAPAE
                     RAIALQLAAGTTMSRGRLQEAMALRAERSAVNSARGAPAPALEDSLLESFLDIWFRER
                     PDRGLQRMEAALARTPLRSLATGDEPYYTMSPGYAASTPYFTVATQYALAGKPDRARA
                     VLAQYDADVRDSLLRRLLEPARQNALGEIALAEGRALEAVAAFRRGDQRNDGPATSCT
                     GCPVILLARAYDRAGMTDSAIVMFERYLATSGPFRMVVNNDGIYLAGTHKRLGELYEA
                     KGDRRRAADHYRKFVALWRNADAELQPKVAEVQQRLARIGRPDG"
     gene            4520..5974
                     /locus_tag="VFN38_13930"
     CDS             4520..5974
                     /locus_tag="VFN38_13930"
                     /inference="COORDINATES: protein motif:HMM:NF019850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Mur ligase family protein"
                     /protein_id="HET9012919.1"
                     /translation="MPDDNGNVITDIIPGTIERIHLVGVAGTGMGSFAGMLKAAGYTV
                     TGSDEKVYPPMSDMLAAWGVDVMTPYAPENIAAAKPDLIIIGNVIRRVNPEAAAARES
                     GIPQMSFPAAFGSLVLEGKHSVVIAGTHGKTTTSAIMAHVLVAAGTDPTFLVGGVTLN
                     YAGNFRNGKGPFVVVEGDEYDTAYFDKGPKFLHYRAKTAMLTSVEFDHADIYRDMAHY
                     ESAYEKFCASLPADGFLAVAASYPNAVAIAKRASKAFVATYAAHGDADYTTENLRFGP
                     EGARFVIREPRGKVGEFLLPMSGHHNVENAIGVYALARALGLSADQIREGFASFTGVK
                     RRQEIRGEVGGVLVIDDFAHHPTAVRETITAIRLRYPDRRLWAIFEPRSNTSRRNIHQ
                     TEYTHAFQGAALATIRVPEPHDKVPVSEQLDINAVVRALNEQGIMADADADVDVLVKR
                     VLAGARAGDVLLVMSNGAFGGFIPSILEGLKSRG"
     gene            6041..6841
                     /locus_tag="VFN38_13935"
     CDS             6041..6841
                     /locus_tag="VFN38_13935"
                     /inference="COORDINATES: protein motif:HMM:NF001911.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HET9012920.1"
                     /translation="MPSRHSSTSNLARRVATVALLTAAVAPHAATQLRTPTARNAIGV
                     QWLGHAAFEITSPGGTKILIDPFLSANPSTPDSLKRLARYKPDAILVTHSHDDHALDA
                     KAISQLSSSTKVISTYEWINAHGFPASQAMGGNVGGTFRIGDVTIHLVPAMHSSDPGG
                     RPLGFVLEFADHRTLYHTGDTWLFGDMDLIQEFYRPNIILIGVGGGPYTMDPRMAQRA
                     IDKYFKPQAIVPMHYGTFEGLATATDVRVRFAGDRRVTIMTPGQKLFF"
     gene            6841..7185
                     /locus_tag="VFN38_13940"
     CDS             6841..7185
                     /locus_tag="VFN38_13940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012921.1"
                     /translation="MTIPPALSAAEWNGVLLQKDGLAHLREEFGKLPFSAHAIAALLL
                     YDQPFGFTRQDAQDEEEVSAYCAVMAAQNRDAGDRATAAKFELLGARHKERAARIAAL
                     LPPADAPLPDAG"
     gene            complement(7168..7626)
                     /locus_tag="VFN38_13945"
     CDS             complement(7168..7626)
                     /locus_tag="VFN38_13945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012922.1"
                     /translation="MTNMPLLRMALLGAALSLPGAASLGAQRARCDRVATTSISFGHT
                     GGTLRPSGVRILASGAVRDLGDTSDPPRAMHKVPVAELRRLARRAWTGPFVRLPTAPT
                     RPTPNPDAARDFIELHSPCGGTRHVEYQGGTGAPEFRRLLAELEALTRVR"
     gene            complement(7703..>8365)
                     /locus_tag="VFN38_13950"
     CDS             complement(7703..>8365)
                     /locus_tag="VFN38_13950"
                     /inference="COORDINATES: protein motif:HMM:NF016552.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012923.1"
                     /translation="DPTLIGSFLRSLGNSPYFNINTTYYDASGSKVLNQVGYTSFWST
                     GSDCAGPSSSPTDAQMVALISCGLNAGKIAYDPNTVYAIFTASGVNLGGGFGSSYCAY
                     HTHGASSKGNVYYAAMPYNQQYPANCTANVASPNADVAGNSEVNTLAHEIEETTTDAM
                     GNAWFDNRGYENADKCAWTWGTVQTAANGGKYNMTLADGNHYLIQQNWVNAGSGGCAI
                     AY"
BASE COUNT         1232 a         2964 c         2989 g         1180 t
ORIGIN      
        1 agcgcgagcg tgacgacgct cttgccccac atctgctgcc ccaccgcctt gtggtgggtg
       61 agcacgacgg gaacatgcgc gcggcggccg atctcgatcg cctcgcccac gccttccagg
      121 aggccgagtc cctcctcgcg caggtgcgac gtgtagatcc ccccggagtc ggcggccgcc
      181 tgcgcgagcg ccaccacctc gtcgatcgtg gagtaggtgc ccggcacgta gcggaggccg
      241 gtggagaggc cgaacgcgcc gtcgcccatc ccccgcgcga ccatcgcgcg catgcgcgcg
      301 agctcgtcgt cggtgggggc gcggttcgcg gtgcccatga cggcgctccg aaccgtgttg
      361 tgccccacga gatacgccac gttgatgccg atgccctggc tgtcgcgcgc cgccatgtac
      421 gccgcgagcg gccagggcga gctgccgtcc ggcccgccga gtgccgtggt gaccccctgc
      481 gtcacggcgc tgcgcgcgcc cggaagctgg gcgaggggct cgagatgcgc gtggagatcg
      541 atgaaccccg gcgcgacgac gcggccgcgc gcgtcgatca cccgagccgc gcgcgagcgc
      601 gggatggcga gacgcgacac gagcacgacg cggtcgcccg tgatggcgac gtcggcgcgg
      661 tagcgcggcg cgccggtacc gtcgatcacg gtgccgcccg cgatgaggag atcgtagcgg
      721 ggctgctgct gtgccgcggc ggcggatgcc gccgcggcga ggagcagcgc ggcgaacggc
      781 gcgcgcgcgc tcaccgggag aggaagcgca accagctgta ggcgtacggg acgacgatca
      841 gcgcgaggac cacgccgatg agcgtgaaca cgacgcgaag ccccttccgc tgccgttcga
      901 gcgcctcccg ctgcaggccg atggcgccgc tctgcgcctc catcgagtgg cgctggccgg
      961 cgagggcttc ttcctggttg gcgagctggc ggcgggtcag ctcgacgagc tcggcgagga
     1021 gggcatccgt gcggtcggac atgttctggt ggatgacgtt ggatcgcgcg cgcccggagg
     1081 tggcgcggcg agccgggaag atgtcaccgc gtgggcgagg tgggtagagc gcggaggtca
     1141 gccgtcgggc cggccgatgc gcgcgagccg ctgctgcacc tcggccacct tcggttgcag
     1201 ctcggcgtcg gcgttccgcc acagcgcgac gaacttccgg tagtggtcgg cggcgcggcg
     1261 gcggtcgccc ttcgcctcgt acagctcgcc gaggcgcttg tgggtgccgg ccagatagat
     1321 gccgtcgttg ttgaccacca tccggaaggg ccccgaggtg gcgagatacc gctcgaacat
     1381 gacgatcgcg gagtcggtca tgcccgcgcg gtcgtatgct cgcgcgagga ggatcaccgg
     1441 gcagcccgtg caggacgtcg cgggtccgtc gttccgctga tcgcctcggc ggaacgcggc
     1501 caccgcttcc agggcacgcc cttcggcgag cgcgatctcg cccagcgcgt tctggcgggc
     1561 cggctcgagg agccggcgca gcagggagtc gcggacgtcg gcgtcgtact gcgccagcac
     1621 cgcgcgcgcc cggtccggct tcccggcgag ggcatactgc gtggcgacgg tgaagtaggg
     1681 cgtgctcgct gcgtagccgg ggctcatcgt gtagtacggc tcgtccccgg tggcgagcga
     1741 gcggaggggc gtccgggcga gcgccgcttc catgcgctgg aggccgcgat cgggccgctc
     1801 gcggaaccag atgtcgagga agctctcgag gagcgagtcc tccagcgcgg gcgccggcgc
     1861 gccgcgcgcg ctgttcaccg cgctgcgctc ggcccggagc gccatcgcct cctgcaggcg
     1921 tccgcgcgac atcgtcgtgc cggccgcgag ctggagcgcg atcgcccgtt cggccggcgc
     1981 gcgcgactgc cgcaggcggc ccacgagcgc cagcgccgag tccgcgtccc cgcgggcgta
     2041 atacagggcg gcgagctgcg tcgtgtaggt gccctgattc ggaaagcggc gctgcaactg
     2101 ctcggcgacg cggcgggcct cggcgaactt cccctccacc accaggatgc cgagaaggtt
     2161 ctggggatag atgggcaccc ggggttcagc cgcggccagc cgcgcgaaca ggctctcggc
     2221 gcgggcgaac tcgcgccgcg tctccagcgc gttgccgagg ttgttcatgg ccacggcgtc
     2281 gtagggatag cgggcgagca gggcttcgta cgccgcgatt ccctttccac ggtccatgcc
     2341 cggcccgcgc gtgaagtagt ccccgagcag cgtgccgcgc tcgcgctccg tgagccggtc
     2401 gcggtactgg tacgccttct tcagcgcgga atcgcgcatc gtgcgcggat actgcgcgtt
     2461 gttgtaggag gccgcgagct tgcgatacgc catggcgaac gacgtgtcca cggcgatcgc
     2521 cgcggtgagc gcccggatcg ccgaatcatc ggcaccggcc gcgttggccc tggacccctc
     2581 cacgtacagt cgcagcgcgt cgagcgacga ggtggtgacc tgctccagcg gcgggtcggc
     2641 gtgcacgtcc cgcagcgact cccccgcctt gccgcgaagc tgccgcgtca gcttgtcgac
     2701 ggtggggagc agctcgcgcg gggtgtccgc ggtctcgtga aacgaggcca gctccgcgcc
     2761 ggagtccgcc gacaccagcc gcacggtgac gacgtacccc tgcccgagcg ggttcacgtc
     2821 gccagtcacc accgccttcg ccccttcgcg cagggcgatc tcgcgcgcga ggtccacgtc
     2881 cacccacgcc gtgggcgccc gctgcatccg ccgcagcgcg gcggagatcg cggcaggcga
     2941 catcgtggag aacagcggcg actccccgag ccccgtgcgc accgcctccg ccacgacgcg
     3001 cgcgagcgac gagtcgccgc cgctgatgcg gaagtcgccc accagcagcc ggtcgcgctc
     3061 gctcagccgg cccgccgcga gcagcgagcc cggggggccg atgccgaggg cgcgcatcgt
     3121 catgaagccg gacaccacga gcacgaacgc gccgagcgcc agcagtccgc cgcgggcgtt
     3181 gcgactccac gagacatgcg gcctcgcccg ctcggccagc accgccaggg agcggcgcgg
     3241 gacgcggccg tcgcgcggcg gcgcggcggg cggctcggac gcggcgcgcc gggtgacata
     3301 gtgcacccag gcggtgagga gcacgacggg gagccccagc cccatcacga tcagcgcgcc
     3361 ggccaccacc cactcgggga ggccgatcca cagggtggcc gcgcgcgcca gcagcagcac
     3421 ggcgatgacg gaggccacgt acagcatcag cgccttgccg agcaccaccg ggaccagcac
     3481 cgacgagggc accgccagct gcgcgctgtg gcgggcgacg accgagtcga gcgtcgcggt
     3541 gacctcgccg gcgtgctggg gccggttcgc cggatccttc tcgaggcacc gcatgaccag
     3601 ctcctcgagc gcggccggca cgtcgggccg gaagccggcg atgggggcgg gcgtctcgct
     3661 gatctgcgcg acgagccgct tgtgcggcgc cacgtcgaag aaggggggct ggccggtgag
     3721 cagctcgtac gccatgcagc cgaaggagta gatgtcggcg cggtggtccg tggccggatc
     3781 ggcggccgcc tgctccggcg ccatgtacgc cggggtgccg atggacgtgc cggtcatggt
     3841 gatggacgtg cgccccgtgg cggaggtgga ggacgagagc gccttcgcga tcccgaagtc
     3901 catcaccacc gcgacgccgc cgctcagcag cacgttgtcc ggcttgatgt cgcggtgcac
     3961 cacgccctgg gcgtgcgcgt acgcgagcgc cttcgccacg tcgcgcagga tgccgagcgc
     4021 ctcggtgagg gggagcgcgc cggcaccgct cagccgggcc cgcagcgact gcccctccac
     4081 gaacggcatc gtgtagtacg gcactccgtc catctccccc gccgtcagca gggggacgat
     4141 gtggggatgc tgcagccggg cggcgaagcg gacctcgcgc cggaagcggt cgatgttgac
     4201 gccgccggcg aggtcggggg gcagcacctt caccacgacg ctgcggccga gcgccttctc
     4261 ggtcgcgacg aagacgcggc tcatcccgcc cccgcccagc tcccgctcga gcgtgtaggc
     4321 ggcacccagt gtgccctgca gttggtcgcg cagctccgtc atcgccggtc cccggaggcg
     4381 agagggcccc cgcggcccgc gcgggggagc ccgaagctat ccccgcccgg ggacggcggc
     4441 cagagacgcg cggcccggcg gctggattaa cttcaggccg tcaacccgct ctcgcccccc
     4501 gaccgcgacc gctccgatca tgcccgacga caacggcaac gtcatcaccg acatcatccc
     4561 cggcacgatc gagcgcatcc acctggtggg cgtcgccggc accgggatgg gctccttcgc
     4621 cgggatgctc aaggccgccg gctacaccgt cacgggcagc gacgagaagg tctacccgcc
     4681 catgagcgac atgctggcgg cgtggggggt ggacgtgatg acgccgtacg cgccggagaa
     4741 catcgccgcc gcgaagcccg acctcatcat catcgggaac gtgatccggc gggtgaaccc
     4801 ggaggccgcg gcggcgcgcg agagcggcat cccgcagatg agcttccccg ccgccttcgg
     4861 ctcgctcgtg ctcgagggaa agcacagcgt ggtcatcgcc ggcacgcacg gcaagacgac
     4921 gacgtcggcg atcatggcgc acgtgctcgt ggcggccggc accgacccga ccttcctcgt
     4981 cggcggcgtg acgctcaact acgccggcaa cttccgcaac gggaagggcc cgttcgtggt
     5041 cgtcgagggc gacgagtacg acacggcgta cttcgacaag ggccccaagt tcctgcacta
     5101 tcgcgcgaag acggcgatgc tcacgagcgt ggagttcgac cacgccgaca tctatcgcga
     5161 catggcgcac tacgagtcgg cgtacgagaa gttctgcgcg agcctgccgg ccgatggatt
     5221 tctcgccgtg gctgcatcct atcccaacgc cgtggccatc gcgaagcggg cgtcgaaggc
     5281 gttcgtggcc acctacgccg cgcacggcga cgccgactac accacggaaa acctgcgctt
     5341 cggtcccgag ggcgcccgct tcgtgatcag ggagccgcgc ggcaaggtgg gggagttcct
     5401 gctgccgatg tcggggcatc acaacgtgga gaacgccatc ggcgtctacg ccctggctcg
     5461 cgcgctcggc ctgagcgccg accagatccg tgaggggttc gcgtccttca ccggcgtgaa
     5521 gcgccgccag gagatccgcg gtgaggtcgg cggcgtgctc gtcatcgacg acttcgcgca
     5581 tcaccccaca gccgtgcgcg agacgatcac ggccatccgg ctgcgctacc ccgatcgccg
     5641 gctctgggcg atcttcgagc cccgctccaa caccagccgc cgcaacatcc accagaccga
     5701 gtacacgcac gccttccagg gcgcggcgct cgccaccatc cgcgtccccg agccgcacga
     5761 caaggtgccg gtgagcgagc agctcgacat caacgcggtg gtgcgggcgc tgaacgagca
     5821 gggcatcatg gccgacgcgg acgccgacgt ggacgtgctc gtgaagcgcg tgctcgccgg
     5881 cgccagggcg ggcgacgtgc tgctcgtgat gagcaatgga gcattcggcg ggttcatccc
     5941 gtccatcctc gagggactga aatcccgggg atgagcaggt tttttgcgac gccgtccgcc
     6001 gttcagtgag tcggttccac cgttcagctc ggagcttcac atgccgtccc gtcattcgtc
     6061 gacgtcgaac ctcgcccgcc gcgtcgcgac ggtcgcgctg ctgaccgccg cagtcgcgcc
     6121 gcacgccgcc acacagctgc ggacgcccac ggcccgcaac gccatcggcg tgcagtggct
     6181 cggccacgct gccttcgaga tcacctcacc cggcggcacc aagatcctca tcgatccctt
     6241 cctctcggcc aatccgtcca cgccggactc gctcaagcgg ctcgcgcgct acaagcccga
     6301 cgcgatcctc gtcacccact cgcacgacga tcacgcgctg gacgcgaagg cgatctcgca
     6361 gctcagcagc tcgacgaagg tgatctccac ctacgagtgg atcaacgcgc acggattccc
     6421 ggcgagccag gcgatgggcg gcaacgtggg gggcaccttc cggatcggcg acgtcacgat
     6481 ccatctcgtg cccgccatgc actccagcga tcccggcggg cgccctctcg gcttcgtgct
     6541 ggagttcgcc gaccaccgca cgctctatca cacgggcgac acctggctgt tcggcgacat
     6601 ggacctgatc caggagttct atcgcccgaa catcattctc atcggcgtgg gcggcggccc
     6661 gtatacgatg gatccgcgca tggcacagcg ggcgatcgac aagtacttca agccgcaggc
     6721 gatcgtgccc atgcactacg gcaccttcga ggggctcgcc acggcgaccg acgtccgcgt
     6781 gcgcttcgcc ggcgaccggc gggtgacgat catgacgccc ggccagaagc tcttcttctg
     6841 atgacgatcc cgcccgccct ctccgccgcc gagtggaacg gcgtcctgct gcagaaggac
     6901 gggcttgccc atctccgcga ggagttcggc aagctcccct tctcggcgca tgcgatcgcc
     6961 gcgctcctgc tctacgacca gccgttcggc ttcacgcggc aggacgcgca ggacgaggag
     7021 gaggtgagcg cctactgcgc ggtgatggcg gcgcagaacc gcgacgcggg cgatcgcgcc
     7081 acggcggcga agttcgagct gctcggcgcc cggcacaagg agcgcgcggc gcgcatcgcc
     7141 gcgctgctcc cgcccgccga cgctccgcta ccggacgcgg gttagcgcct cgagctcggc
     7201 gagcagccgg cgaaactccg gcgcgcccgt gcctccctga tattccacgt gcctggtgcc
     7261 accgcacggt gaatgcagct cgatgaagtc gcgcgccgcg tcgggattgg gcgtgggacg
     7321 cgtgggagcc gtcggcagcc gcacgaacgg accggtccac gcacgacgcg cgagccgccg
     7381 cagctcggcc acgggcacct tgtgcatcgc gcgcggcgga tcggaggtgt cgcccaaatc
     7441 gcgcaccgcg ccgcttgcca ggatgcgcac cccgctcggc ctgagcgtgc caccggtgtg
     7501 cccgaacgag atggaggtgg tggcgacgcg atcgcagcgc gcgcgttgcg cgccgagcga
     7561 cgcggcaccg ggcagtgaga gggctgcgcc gaggagcgcc atccgcagca aaggcatgtt
     7621 cgtcatgatc gaggagcgat gcaacagcgg ggcctcgacg ttcgtcgaga ccccgctgcg
     7681 tgctgcatgt ggtgtcgcag cgtcaatagg cgatcgcgca gccgcccgag cccgcgttca
     7741 cccagttctg ctggatgaga tagtggttgc cgtcggcgag cgtcatgttg tacttgccgc
     7801 cgttggccgc cgtctgcacc gtgccccacg tccacgcgca cttgtccgcg ttttcgtagc
     7861 cgcggttgtc gaaccaggcg ttgcccatcg cgtcggtggt ggtctcctcg atctcgtgcg
     7921 cgagggtgtt cacctccgag ttcccggcga cgtccgcgtt cggcgaggcg acgttcgccg
     7981 tgcagttggc cggatactgc tggttgtacg gcatggcggc gtagtacacg ttccccttcg
     8041 agctcgcgcc gtgtgtgtgg taggcgcagt acgacgagcc gaagccgccg ccgaggttga
     8101 cgccggaggc ggtgaagatg gcgtacaccg tgttcggatc gtaggcgatc ttgccggcgt
     8161 tgagcccgca cgagatcagc gcgaccatct gcgcatcggt cgggctggac gacgggccgg
     8221 cgcaatcgga gccggtggac cagaagctcg tgtagccgac ctggttcagc accttggagc
     8281 ccgacgcgtc gtagtaggtc gtgttgatgt tgaagtacgg cgagtttccg aggcttctga
     8341 ggaaggaacc gatgagcgtc ggatc
//
LOCUS       DASSYW010000878         4084 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_8576, whole genome shotgun sequence.
ACCESSION   DASSYW010000878 DASSYW010000000
VERSION     DASSYW010000878.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4084)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4084)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4084
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_8576"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            59..979
                     /locus_tag="VFN38_13955"
     CDS             59..979
                     /locus_tag="VFN38_13955"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016208 - AMP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HET9012924.1"
                     /translation="MVAIDRVLCPVDLSSYSRQALQHALAIARWYEAKVTVLHVFRQV
                     PVVDTAAAALGAGLYAPPVALPEIDRTAVERQVAEFVAHTPEAEDVTIHVCEGINVRE
                     EILREAAAMAADLLVLGSHGLTGVKRLVLGSVAEDVLRHSPTPVLIVPAHASEASATG
                     VPFKRIVCAVDFDADSYHALRYAFDLAQESDAQLTLLHAVAMPAVHVGAEDLTIDVES
                     IRDTVMRNARARLDTLVPDDARAYCSVHAEVVEGQAHKAVLGLATEVNADLIIMGVHS
                     RAAFDVAVFGSTTQAVVRAAHCPVLTVHQE"
     gene            984..1529
                     /locus_tag="VFN38_13960"
     CDS             984..1529
                     /locus_tag="VFN38_13960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012925.1"
                     /translation="MANVTFPPLYVRRLAGAMMLDAPTYEDVEVDRRATLQACLTVLL
                     AAVGEGVALRHTGGLSNVVLMSAVALMGWAAWALLTFEVGARLMPGARTHSDVGELLR
                     TLGFAAAPGLVAYLSLVPGLMLPVLLVSRTWMLLAMVVAVRQALDYTSTWRAIAVCLV
                     GWLLTSAIILAMAFFGGTTVS"
     gene            1540..1992
                     /locus_tag="VFN38_13965"
     CDS             1540..1992
                     /locus_tag="VFN38_13965"
                     /inference="COORDINATES: protein motif:HMM:NF014373.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MgtC/SapB family protein"
                     /protein_id="HET9012926.1"
                     /translation="MDAVAVPASFAELAGRLLLATLFGALVGLNRERQGKPAGLRTHA
                     LVALGGAQMAILALLFGQHDVSAPSRVLQGVLAGVGFIGAGVILHRGDAQGVQGLTTA
                     AAIWVVAAIGVAAGAGLWRTAASGLALTLLVLTVGERVDRWIHRDTPQ"
     gene            2058..3287
                     /locus_tag="VFN38_13970"
     CDS             2058..3287
                     /locus_tag="VFN38_13970"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HET9012927.1"
                     /translation="MRTQKRTIVALLVLALPVAAAAQDVAVTNARIVVGTGQVIESGT
                     IIVRGGTIASVTAGPAPTQGLRVIDAKGLSAMPGFIDSHKHVNDGPSAKAQMQSLLEA
                     GYTTILSGGSNGGADVALRDKIEKGEYNGPRIIPSVRIPLTQTPAEARAAVQAMAAKG
                     IRHTAEIGLTPEPAPPQAEIEVLKAIVDEAKKAGVQVNVHAVSTPAMVAAVDAGVTRL
                     VHLPNKDWTSYDAAETVAKTGSIVAGLIAFGAPTIDRESPAPAVVQFPRDNTTRFRDG
                     KPWPEAIAGANRDPKGRAVGTEAGYTIVNARRIWDADPNHQTMAYSTDQNFADLAVLE
                     HELKSYSIVFSMADIHRIMGPNSARYVGMADKIGTLEAGKLGDIILIDGNPTLNIYEM
                     LKTKVVLKEGKVVVDKR"
     gene            3379..>4084
                     /locus_tag="VFN38_13975"
     CDS             3379..>4084
                     /locus_tag="VFN38_13975"
                     /inference="COORDINATES: protein motif:HMM:NF013720.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012928.1"
                     /translation="MHNKSLEDVLQAAGDPVRLLRNMQSGPNVYPGIPPEYTNWRDET
                     QAWQKTCVLFNQSYHMADLLVEGPDAQKLLSHLAVNSFAGFAVDKAKQFVPCTPDGYV
                     IGDVILFYLAPNSFNLVGRIPSLNWIQFHAATGGYDVQVTLDERSAARPDPFGRKSYR
                     FQLQGPNAMHVLEKVIGGKAPELKFFNMGHVTIAGRPVRALRHGMAGQPGYELFGPYA
                     EHDLIREAIGKAGEEFG"
BASE COUNT          641 a         1380 c         1418 g          645 t
ORIGIN      
        1 ctcgagcgct cggtagaggc ggcacgcccc ttgcctccag acactgtgga ggtgggccat
       61 ggttgcgatc gaccgcgtcc tctgtcctgt cgatctctct tcgtactcgc gccaggcttt
      121 gcagcatgca ctggcgatcg cgcggtggta cgaggccaag gtcaccgttc tgcacgtgtt
      181 ccggcaggtt cccgtcgtcg ataccgcggc ggcggcgctc ggtgccggcc tgtacgcgcc
      241 ccccgtcgca ctgcccgaga tcgatcgcac ggcggtggaa cggcaggtgg ccgagttcgt
      301 ggcgcacacg ccggaagccg aggacgtgac gattcacgtc tgcgaaggaa tcaacgtccg
      361 tgaggaaatt ctccgcgagg cggcggccat ggccgccgat ctgctcgtcc tgggcagtca
      421 tgggctgacc ggcgtcaagc ggctcgtgct cggctcggtc gccgaggacg tcctccggca
      481 ctcgcccacg ccggtcctga tcgtcccggc gcacgcgtcc gaggcgtcgg cgacgggcgt
      541 gccgttcaag cgcatcgtct gcgccgtgga cttcgacgcc gactcctacc acgcgctgcg
      601 ctacgcgttc gacctcgccc aggagtcgga cgcgcaactg acgctgctgc acgcggtggc
      661 catgcccgcc gtccacgtcg gcgcggagga tctgacgatc gacgtcgagt cgatccgcga
      721 cacggtgatg cgaaacgccc gcgctcgtct cgacacgctg gtcccggacg acgcccgcgc
      781 gtactgcagc gtgcacgccg aggtggtcga ggggcaggcg cacaaggcgg tgctgggcct
      841 cgcgaccgag gtgaacgctg atctgatcat catgggcgtc cacagccgtg ccgcgttcga
      901 cgtggcggtg ttcggctcca cgacgcaggc cgtggtacgt gccgcgcact gtccggtgct
      961 gacggtgcac caggagtgac cagatggcta acgtgacctt tccaccgctg tacgtccgcc
     1021 gcctcgcggg cgcgatgatg ctcgacgcgc ccacctacga agacgtcgag gtcgatcgcc
     1081 gcgccaccct gcaggcctgc ctgacggtgc tcctggccgc ggtcggcgag ggcgtggcgt
     1141 tgcgccacac aggaggcttg agcaacgtcg tgctcatgtc ggccgtggcg ctcatgggat
     1201 gggccgcctg ggccctcctg acgttcgagg tcggggcccg gctgatgccg ggcgccagga
     1261 cccatagcga cgtgggcgag ctgttgcgca cgctggggtt cgcggcggcg ccggggctcg
     1321 tggcgtatct gtcactcgtt cccgggctga tgctgccggt gctcctcgtc tcgcgtacgt
     1381 ggatgctgct ggcgatggtg gtcgccgtgc ggcaggcgct cgactacacc agcacgtggc
     1441 gggcgattgc ggtctgtctg gtcggctggc tgctcacgtc ggccatcatc ctggcgatgg
     1501 cgttcttcgg cgggaccacg gtgtcatagg atcctccgca tggacgcggt ggcggttccc
     1561 gcctcgttcg ccgaactggc gggacggttg ctgctggcga cgctcttcgg ggcgctggtc
     1621 ggcctgaatc gcgaacggca aggcaagccc gcgggcttgc gcacccacgc gctggtggcg
     1681 ctcggtggcg ctcagatggc catcctggcc ttgctcttcg ggcagcacga cgtcagcgct
     1741 ccgagccgcg tgctgcaagg cgtgctggcg ggcgtcggtt tcatcggcgc cggtgtgatc
     1801 ctccaccgag gtgacgcgca aggcgtgcag gggctcacca ccgccgcggc gatctgggtc
     1861 gtggccgcca ttggcgtcgc cgccggggct ggtctctggc gcaccgccgc cagtggcctc
     1921 gcgttgacgc tgctcgtcct cacggttggc gaacgagtcg accggtggat ccatcgcgac
     1981 acgccacagt gaggggctga aaggcccgca gctccattcc ctgtggtagg ctcgccgccg
     2041 cacaggagac cacagtgatg cgcacacaga agcggaccat cgtcgcgctg ctcgtcctcg
     2101 ccttgccggt cgccgcggcg gcgcaggacg tggccgtgac gaacgcccgc atcgtcgtcg
     2161 ggacgggcca ggtgatcgag tcgggcacca tcatcgtgcg cggcgggacc atcgcatccg
     2221 tgacggcggg cccggcgccc acccagggcc ttcgcgtgat cgacgcgaag gggctgtcgg
     2281 cgatgccggg cttcatcgac agccacaagc acgtgaacga cggcccgagc gccaaggcgc
     2341 agatgcagtc gctcctcgag gccggctaca cgacgatcct ctcgggcggc agcaacggcg
     2401 gcgccgacgt ggcgctgcgc gacaagatcg agaagggcga atacaacggc ccgcgcatca
     2461 tcccgtccgt gcgcatcccg ctcacgcaga cgccggccga ggcgcgcgcg gcggtgcagg
     2521 cgatggcggc caagggcatc cggcacaccg ccgagatcgg cctcacgccg gagccggcgc
     2581 cgccgcaggc ggagatcgaa gtgctgaaag cgatcgtcga cgaggcgaag aaggcgggcg
     2641 tgcaggtgaa cgtgcacgcc gtcagcacgc cggcgatggt ggcggcggtc gacgcggggg
     2701 tcacacgcct cgtgcacctg ccgaacaagg actggaccag ctacgacgcc gcggagacag
     2761 tggcgaagac cggctcgatc gtcgccgggc tgattgcctt tggcgccccg accatcgacc
     2821 gcgagtcgcc ggcgcccgcg gtggtgcagt tcccgcgcga caacaccacg cgcttccgcg
     2881 acggcaagcc gtggcccgag gcgattgccg gcgccaaccg cgatcccaag gggcgcgccg
     2941 tgggcactga ggcgggctac accatcgtca acgcccgccg catctgggac gccgatccga
     3001 accaccagac gatggcgtac tccaccgacc agaacttcgc ggacctcgcg gtgctggagc
     3061 acgaactgaa gtcgtacagc atcgtcttct cgatggcgga catccaccgc atcatggggc
     3121 cgaactcggc tcgctacgtg gggatggccg acaagatcgg cacgctcgag gcggggaagc
     3181 tcggcgacat catcctgatc gacggcaacc ccacgctgaa catctacgag atgctcaaga
     3241 cgaaagtggt gctgaaggaa ggaaaagtcg tcgtcgacaa gcgttagtgc cttcgtaggg
     3301 gccgccttca ggcggcccat gattttcgct ctgcggaggc atttaccgct gggcgaactc
     3361 gcttgataaa ctaaccggat gcacaacaag agtctcgagg acgttctaca ggcggcaggc
     3421 gaccccgtgc ggctgctgcg gaacatgcag tcgggtccca atgtctaccc cggcattccg
     3481 cccgaataca ccaattggcg cgacgagacg caggcgtggc agaagacctg cgtgctcttc
     3541 aaccagtcct accacatggc cgacctcctc gtggaagggc cggacgccca gaaactgctc
     3601 tcgcacctcg cggtcaacag ctttgccggc tttgccgtgg acaaggcgaa gcagttcgtg
     3661 ccctgcacgc ccgacggcta cgtcatcggc gacgtgatcc tgttctacct ggcgccgaac
     3721 tccttcaacc tggtcggccg cattccgtcg ctcaactgga tccagttcca cgccgcgacc
     3781 ggcggctacg acgtgcaggt gacgctcgac gagcgctcgg ccgcgcgccc ggacccgttc
     3841 ggccgcaagt cgtatcgctt ccagctgcag gggcccaacg ccatgcacgt gctggagaag
     3901 gtgatcggcg gcaaggcacc tgagctcaag ttcttcaaca tgggccacgt gacgatcgcc
     3961 ggacggccgg tacgcgcgct gcggcacggg atggcggggc agcccgggta cgagctgttc
     4021 ggaccctacg ccgagcacga tctgattcgc gaggcgatcg gcaaggcggg tgaggagttc
     4081 gggc
//
LOCUS       DASSYW010000879         2319 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1582348, whole genome shotgun sequence.
ACCESSION   DASSYW010000879 DASSYW010000000
VERSION     DASSYW010000879.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2319)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2319)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2319
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1582348"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(45..1259)
                     /locus_tag="VFN38_13980"
     CDS             complement(45..1259)
                     /locus_tag="VFN38_13980"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HET9012929.1"
                     /translation="MDALIEAAPVVHDLDRNTHEVGRSLRIARASVSAIFFINGAATA
                     NWLVRIPAVQARLGLSAGALGVALLGVAVGALIAMPRAGHLVARYGSRPVTRAGAILF
                     GATFLFPPLAPNPVVLVLALVALGAGHGTLDVAMNAQAATVERRYGRPIMSGFHALFS
                     AGGLVGASMGGFFAGHGIGPVPHLIGTGLVAGCLATAVTGGMLPASADAVTGDTAPAR
                     PRGILLTLGIMAFCVLLGEGAMADWSALYMRDIAGATAGLAAAGYASFSLAMAAGRFA
                     GDRLTLRFGATPLVRGGGALAAVGLAFAIAITSPWTAIVGFAAVGAGFSVAFPLMLAK
                     AGALPGTSSGTAIATVSVFGYAGFLAGPPLIGFVSQATSLRGGLAVVIVTSVIVAALA
                     GGFRRSTPDRAA"
     gene            complement(1261..2076)
                     /locus_tag="VFN38_13985"
     CDS             complement(1261..2076)
                     /locus_tag="VFN38_13985"
                     /inference="COORDINATES: protein motif:HMM:NF024122.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IB family phosphatase"
                     /protein_id="HET9012930.1"
                     /translation="MKPFLLVSDFDQTLSFNDSGRLLSEMLGIGGFDEKVAGLSRLNL
                     VQEGAELAYLLRHDPEFRRVRRDDLVEVGRHIRLKHHIRELAQLLADGIDGHRFAMHV
                     VSAAPEEVVHAALEGLLPRAHIRGTRFTYAAGTGEIESIVRVSAGYGKVAAVDELRID
                     LGLPRDRVIYVGDGSSDLHVMLHVNRGEGLTIAVSQVRSISEVAKRTVVSDDALSVLV
                     PILEEIVGFGTPEIRALFDRYGFVIQEWEKVRTDWLTIREHATAEQSPIAAVA"
BASE COUNT          390 a          819 c          800 g          310 t
ORIGIN      
        1 cgaaccgatc ggatcaagcg actccgaccc ccttgatcgc gacgttaggc ggcgcggtcg
       61 ggcgtcgacc ggcggaaccc gccggccagt gcggcgacga tgacgctcgt gacgatcacg
      121 acggcgaggc cgcctcgcag cgacgtcgcc tgcgagacga agccgatgag cggcggaccc
      181 gcgaggaagc cggcgtagcc gaagaccgac accgtcgcga tcgccgtgcc ggagctcgtg
      241 cccggaagag cgcccgcctt cgccaacatc agcgggaacg cgaccgagaa tccggcgccc
      301 accgccgcga atccgacgat cgccgtccac gggctggtga tcgcaatcgc gaacgcgagg
      361 cccacggcgg cgagcgcgcc accgccgcgc acgagcggcg tggcgccgaa gcgcagcgtc
      421 aggcggtcgc cggcgaatcg gcccgcggcc atcgcgagcg agaacgacgc gtacccggcg
      481 gccgcgagtc ccgcggtggc gcccgcgatg tcacgcatgt agagcgcgct ccagtcggcc
      541 atggcgcctt cgccgaggag cacgcagaac gccatgatgc ctaacgtgag caggatcccg
      601 cgcggccgcg ccggcgccgt gtcgccggtg acggcgtcgg cgctcgcagg cagcatgccg
      661 ccggtcaccg cggtcgcgag gcaccccgcc acgagccccg tgccgatgag atgcggcacc
      721 ggcccgatcc cgtggccggc gaagaatccg cccatcgacg cgccgacgag accccccgcg
      781 ctgaacagcg cgtggaatcc cgacatgatc gggcgcccgt atcggcgctc gacggtcgcc
      841 gcctgcgcgt tcatcgcgac atcgagcgtg ccgtgcccgg cacccagcgc caccagggcg
      901 agcacgagca cgacggggtt cggcgcgagc ggcggaaaga gaaacgtcgc gccgaacaag
      961 atcgcaccgg cgcgcgtgac gggccggctg ccatatcggg cgacgagatg tccggcacgc
     1021 ggcatggcga tgagcgcacc gaccgcgacg ccgagcagcg cgaccccgag cgcgccggcg
     1081 ctgagcccga gcctggcctg cactgccgga atgcgcacga gccagttggc ggtcgccgcg
     1141 ccgttgatga agaagatcgc ggagaccgac gcgcgcgcga tgcgcagcga ccgcccgacc
     1201 tcgtgggtgt tgcggtcgag gtcgtgcacc accggtgcgg cttcgatcag cgcgtccata
     1261 tcaggccacc gcggcgatcg gcgactgctc cgccgtcgcg tgctcgcgga tggtcagcca
     1321 gtccgtgcga accttctccc attcctgaat cacgaacccg tagcggtcga agagcgcgcg
     1381 gatctcggga gttccaaagc cgacgatctc ttccaggatc gggacgagca cgctgagcgc
     1441 gtcgtcgctc acgacggtgc gcttcgcgac ctcgctgatg ctccgcacct gcgacaccgc
     1501 gatcgtgagt ccttcgccac ggttcacgtg cagcatgacg tgcaggtcgg agctgccatc
     1561 gccgacatag atgacgcgat cgcgcgggag gcccaggtcg atgcgcagct catcgactgc
     1621 ggcgaccttg ccgtagccgg cggacacgcg gacgatcgac tcgatctcgc cggtaccggc
     1681 cgcgtaggtg aagcgcgtgc cgcggatgtg cgcccgcggc aggagtccct ccagggcggc
     1741 gtgcacgacc tcttcgggag ccgccgagac cacgtgcatt gcgaagcgat gtccgtcgat
     1801 gccgtcagcg agcagctgcg cgagctcgcg gatgtggtgc ttgaggcgga tgtgccgccc
     1861 gacttccacg aggtcgtcgc ggcgaacgcg gcggaactcg ggatcgtggc ggagcagata
     1921 cgcgagctcc gcaccctcct gcacgaggtt caggcgcgac aggccggcga ccttctcgtc
     1981 gaagccgccg atgcccagca tctcgctcag aagccgaccc gaatcgttga agctcagggt
     2041 ctggtcgaag tcgctgacca gcagaaaggg cttcatcggc gctccgtccg ccgctcgcct
     2101 aacgtcgtca tcgggattcg ggtactcgtc gctgtccaca cgggtgaatg aacgcgaatt
     2161 cggggctccg cgtccaatac atctttgatg agtggcaata ccttatgggt aagacaaccc
     2221 gatctcgtca ccactgcgtc acaggtctgc ccccatggag ctccgccacc tccggtattt
     2281 cgtcgcggtc gccgaggagc tgcacttcgg gcgcgcggc
//
LOCUS       DASSYW010000880         2527 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_900783, whole genome shotgun sequence.
ACCESSION   DASSYW010000880 DASSYW010000000
VERSION     DASSYW010000880.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2527)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2527)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2527
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_900783"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..877
                     /locus_tag="VFN38_13990"
     CDS             <1..877
                     /locus_tag="VFN38_13990"
                     /inference="COORDINATES: protein motif:HMM:NF014879.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012931.1"
                     /translation="IPYIDVEGIRKRRFKVALDCVRGAGATVMPMLLERLGCEVVAIN
                     MEPDGRFPREPEPVPENLKELERLVKESGADVGLAVDPDVDRLALVADGGRAIGEDYT
                     LALAARVVLRHRRGPLVTNLSTSLVVEDAARSAGAEAVRAPVGEVNVAVRMRELSAPI
                     GGEGNGGVILPEVHLGRDAPIGAALVLQLLLEEGRPLSAIVASLPRYAIVKDKLPRPN
                     ASLDAVYAALQSAFPDAAADTQDGLRLAWPDRWVHVRPSGTEPIVRVIAEAPDEAGAR
                     ELVRRSRVPLDALAG"
     gene            915..>2527
                     /gene="glmS"
                     /locus_tag="VFN38_13995"
     CDS             915..>2527
                     /gene="glmS"
                     /locus_tag="VFN38_13995"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004360 - glutamine-fructose-6-phosphate
                     transaminase (isomerizing) activity [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HET9012932.1"
                     /translation="MCGIVGYVGGRQATTLLVDGLKRLEYRGYDSAGVSLMNGEGVET
                     RKAKGKIAMLEKAIVANPIHGMIGIAHTRWATHGPPNECNAHPHHDCKGRISVVHNGI
                     IENYGPLRAMLKKTGHVFVSDTDTEVLAHLIEAAFDGNLENAVVDALALVEGTYGIAV
                     ISADDPDKIVAARKGSPLLIGIGEGENYVASDVAAILAHTRQVVYLDDGELAVLTRDG
                     YTVSDLYQQKVNKGVSRIEWDLDQIEKGGFAHFMLKEIMEQPQTIENTMRGRLVTDEG
                     FSKLGGLNLTMDELQNLDQIIITACGTSWHSALIGELMIEEHARIRCEVEYASEFRYR
                     NPIVTDKTLCVVISQSGETADTLAAMREAKRRGAKTLGLVNQVGSTIAREDDGGIYLH
                     AGPEIGVASTKAFTSQVIALALLTLKLGRIRNMSVVQGREIAQAMEALPAQIQSILDR
                     AKEVEKIAEAFTDATNFLYLGRGYNFPVALEGALKLKEISYIHAEGYPAAEMKHGPIA
                     LINEGMPAVFIANRGRQYDKVMSNIAEVKA"
BASE COUNT          440 a          762 c          968 g          357 t
ORIGIN      
        1 gatcccgtac atcgacgtcg agggaatccg gaagcgccgg ttcaaggtgg ccctcgactg
       61 cgtgcgcggc gccggcgcca cggtgatgcc gatgctgctc gaacgcctcg gctgcgaggt
      121 cgtcgcgatc aacatggagc cggatggccg gttcccccgc gagcccgagc cggtgcccga
      181 gaacctcaag gagctcgagc ggctggtgaa ggaaagcggc gcggacgtcg ggctcgccgt
      241 ggatccggac gtcgaccggc tggcgctcgt ggcggatggc gggcgggcga tcggggagga
      301 ctacacgctc gcgctcgccg cgcgggtggt gctgcgccac cggcgcgggc cgctggtgac
      361 gaacctgtcg acgagcctgg tggtcgagga cgccgcgcgg agcgcggggg ccgaggcggt
      421 gcgggcgccc gtcggcgagg tcaacgtggc cgtgcggatg cgggagctca gcgcgccgat
      481 cggcggggag ggaaatgggg gggtcatcct gcccgaggtg catctggggc gcgacgcgcc
      541 gatcggcgcg gccctggtcc tgcaactact gctggaggag gggcggccgc tgtcggcgat
      601 cgtggcgtcg ctgccccgct acgcgatcgt gaaggacaag ttgccacgcc cgaacgcgag
      661 cctggatgcg gtgtacgccg cgctgcagtc cgcgtttccc gatgcggcgg cggatacgca
      721 ggacgggctg cgccttgcct ggcccgatcg atgggtgcac gtgcggcctt cgggcaccga
      781 gcccatcgtg cgggtgatcg ccgaggcgcc ggacgaggcc ggggcgcggg agctcgtgcg
      841 ccggtcgcgg gtgccgttgg acgcgctggc cggctgaccg gccggaacgc tctctcattt
      901 cgaggacgcg acacatgtgc ggaattgtcg gatacgtcgg cggcaggcag gcgactaccc
      961 tgctcgtgga cgggttgaag cggctggagt accgcgggta cgactccgcc ggcgtctcgc
     1021 tgatgaacgg cgagggcgtg gagacgcgga aggcgaaggg gaagatcgcc atgctcgaga
     1081 aggcgatcgt ggcgaatccg attcacggca tgatcggcat cgcgcacacg cgctgggcga
     1141 cgcatgggcc gccgaacgag tgcaacgccc acccgcacca cgactgcaag gggcggatct
     1201 cggtcgtcca caacgggatc atcgagaact acgggccgct gcgcgcgatg ctcaagaaga
     1261 cggggcacgt gttcgtgtcg gacaccgaca cggaggtgct ggcgcacctg atcgaggcgg
     1321 cgttcgacgg caacctcgag aacgccgtcg tggatgcgct cgcgctcgtg gagggcacgt
     1381 acggcatcgc ggtgatctcg gcggacgatc cggacaagat cgtggcggcg cggaagggga
     1441 gcccgctgct gatcgggatc ggcgaagggg agaactacgt cgcgagcgac gtcgcggcga
     1501 tcctggcgca cacgcgccag gtggtctacc tggacgatgg cgagctggcg gtgctgacgc
     1561 gggacggcta cacggtgtcc gacctctatc agcagaaggt caacaagggc gtcagccgca
     1621 tcgagtggga tctcgatcag atcgagaagg gcggcttcgc gcacttcatg ttgaaggaga
     1681 tcatggagca gccgcagacg atcgagaaca cgatgcgcgg ccgcctcgtg acggacgaag
     1741 ggttctcgaa gctcggcgga ctcaatctca cgatggacga gctccagaac ctcgatcaga
     1801 tcatcatcac ggcgtgcggc acgagctggc acagtgcgct gatcggcgag ctgatgatcg
     1861 aggagcatgc gcgcatccgc tgcgaggtgg agtacgcgtc ggagttccgg tatcgcaatc
     1921 cgatcgtgac ggacaagacg ctgtgcgtcg tgatctcgca gtcgggggag acggcggaca
     1981 cgctggcggc gatgcgcgag gccaagcggc gcggcgccaa gacgctgggg ctcgtcaacc
     2041 aggtcggctc cacgatcgcc cgcgaggacg acggcggcat ctatctccat gccgggccgg
     2101 agatcggcgt ggcgtcgacg aaggcattca cgagccaggt gatcgcgctg gcgctgctga
     2161 cgctgaagct ggggcgcatc cgcaacatgt cggtggtgca gggccgcgag atcgcgcagg
     2221 cgatggaggc gctgccggcg cagatccaga gcatcctcga tcgcgccaag gaagtggaga
     2281 agatcgccga ggcgttcacc gacgcgacga acttcctgta cctcggacgc ggctacaact
     2341 tcccggtcgc gctcgaaggt gcgctgaagc tcaaggagat cagctacatc cacgccgagg
     2401 gctatcccgc ggcggagatg aagcacggcc cgatcgcgct gatcaacgag gggatgccgg
     2461 cggtgttcat cgcgaaccgg gggcgccagt acgacaaggt gatgagcaac atcgccgagg
     2521 tgaaggc
//
LOCUS       DASSYW010000881         2726 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_376719, whole genome shotgun sequence.
ACCESSION   DASSYW010000881 DASSYW010000000
VERSION     DASSYW010000881.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2726)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2726)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2726
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_376719"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2548
                     /locus_tag="VFN38_14000"
     CDS             <1..2548
                     /locus_tag="VFN38_14000"
                     /inference="COORDINATES: protein motif:HMM:NF012471.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004181 - metallocarboxypeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="M14 family zinc carboxypeptidase"
                     /protein_id="HET9012933.1"
                     /translation="VEKASPRVKVFSLGMSDEGREMIVAAVADSATIARLDEYRAMTA
                     RLADPRGLAPAERARLLREAKPIYWLTGSIHSPETGSPEMLMELLYRLAVEESEHVSS
                     IRNGVITLITPATEVDGRDRQVDAAKLSRSLGLGPSGVSLTYWGKYTAHDNNRDGMVL
                     SQKLTQHVMDGFLHWHPTVMHDLHESVAFLHTSTGTGPYNDEFDPIVINEWHTLAYQE
                     INELTKRGLPGVWTHGFYDGWAPNYMLAIANLHNSIGRFYETYTAMNADCHITNFPAA
                     TTERRWDRPSPPVNGVKWCIRSNINFQQSGVLTALKYVADHRTTFLDNFVTKGERQIA
                     KGRNSAPYAFVVPRAQRRAAEAADLVNLFRQHGTEIHVATTDVTLKGATAADAPVVVR
                     AGDWVVRMDQPYTQTARTLLAIQKFKPDLPSPYDDTGWTLDELRHVQTLKIADPAVLA
                     APMTRLAGDAGVTGTVVGAGDVLLVPHLGDWRSAVLPWKLGGARAWVADTSFVVGGRS
                     FERGTFILEHASADARRAVETLGLAGTATGSVPSVRKHLVAAPRVALVHSWIETQNEG
                     WVRYAFDRMGIPFTYLADQKLDQPGLLDRYDVVVFPHVSGPATTIVNGRPQTGPAIPW
                     KKTALTPNLGKWDETDDTRKGMGLTGLAALRRFVERGGLLVVEGNSSRIPIDFGLVPT
                     VSVVPSQKLLARGGVYRAQLMMPESPIAYGYERTSFPLYFNQAPLMTVQAAPSPAQRP
                     VGVDSAITNATERMRARTIVRWTPKADELLISGLLDSGDEMAGRATVVDAPLGRGHVV
                     LFGTRPMWRWESQGAFALMLNAMANWSSLDINQRAPTTAPVAAAAASTGR"
     gene            2586..>2726
                     /locus_tag="VFN38_14005"
     CDS             2586..>2726
                     /locus_tag="VFN38_14005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_255349561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:2616..2618,aa:Sec)
                     /transl_table=11
                     /product="Rdx family protein"
                     /protein_id="HET9012934.1"
                     /translation="MKISIEYCTLUSYEPRAAGLAAEITEHFPEARVELKPSSGGRFE
                     VLR"
BASE COUNT          459 a          940 c          950 g          377 t
ORIGIN      
        1 ggtggagaag gcatcgccgc gcgtgaaggt gttctcgctg gggatgagcg acgaggggcg
       61 cgagatgatc gtggcggcgg tggccgactc ggcgacgatc gcgcggctgg acgagtaccg
      121 cgccatgacg gcgcgactcg ccgatccgcg cgggctggcc ccggcggagc gcgcgcgact
      181 cctgagggag gcgaagccga tctactggct cacggggagc atccactccc cggagacggg
      241 cagcccggag atgctgatgg agctgctgta ccgtctcgcg gtggaggaga gcgagcacgt
      301 ctcgtccatc cgcaacggcg tcatcacgct gatcacgccg gccaccgagg tggacgggcg
      361 cgaccggcag gtggatgcgg cgaagctctc ccgctcgctc ggactgggcc ccagcggcgt
      421 gtcgctcacg tactggggca agtacacggc gcacgacaac aaccgtgacg ggatggtgct
      481 ctcgcagaag ctcacccagc acgtgatgga cgggttcctc cactggcacc cgaccgtgat
      541 gcacgacctg cacgagtcgg tggccttcct gcacaccagc accggcacgg gcccgtacaa
      601 cgacgagttc gacccgatcg tgatcaacga gtggcacacg ctcgcctacc aggagatcaa
      661 cgagctgacg aagcgcggcc tgcccggcgt gtggacgcac ggcttctacg acggctgggc
      721 ccccaactac atgctggcga tcgcgaacct gcacaactcc atcggccgct tctacgagac
      781 ctacacggcg atgaatgcgg actgccacat caccaacttc cccgcggcga cgaccgagcg
      841 gcggtgggac cgtccgagcc cgcccgtgaa cggcgtgaag tggtgcatcc gcagcaacat
      901 caacttccag cagtcggggg tgctcacggc gctcaagtac gtggccgacc accggacgac
      961 cttcctggac aacttcgtca ccaagggaga gcggcagatc gccaagggac gaaactccgc
     1021 gccgtatgcc ttcgtggtcc cgcgcgcgca gcgccgtgcc gcggaagcgg cggatctggt
     1081 gaacctgttc cggcagcacg gcacggagat ccatgtggcc accacggacg tcacgctgaa
     1141 gggggcgacc gccgcggacg cgccggtcgt cgtgcgcgcc ggcgactggg tggtgcggat
     1201 ggaccagccg tacacgcaga ccgcccgcac gctgctcgcg atccagaagt tcaagcccga
     1261 tctcccctct ccgtacgacg acaccggctg gacgctcgac gaactgcgtc atgtgcagac
     1321 gctcaagatc gccgatccgg cggtgctcgc ggcgccgatg acgaggctcg ccggcgacgc
     1381 cggcgtgacc ggcaccgtcg tcggcgccgg cgacgtgctg ctcgtgccgc acctcggcga
     1441 ctggcgcagt gcggtgctgc cgtggaagct cggcggcgcc cgcgcctggg tggccgacac
     1501 gtcgttcgtg gtcggcggcc ggagcttcga gcgcggcacg ttcatcctcg agcacgcgag
     1561 cgccgacgcg cgccgcgccg tggagacgct cgggctggcc ggcaccgcca cgggaagcgt
     1621 gccctcggtc cggaagcatc tcgtcgcggc gccgcgcgtg gcgctcgtgc actcctggat
     1681 cgagacgcag aacgaagggt gggtgcgcta cgccttcgat cgcatgggaa tccccttcac
     1741 ctacctggcc gaccagaagc tcgaccagcc cgggctgctc gaccgctacg acgtcgtggt
     1801 gttcccgcac gtgagcggtc cggcgacgac gatcgtgaac ggccgcccgc agacggggcc
     1861 ggcgatcccg tggaagaaga ccgcgctcac gccgaacctc ggcaagtggg acgagaccga
     1921 cgacacccgc aaggggatgg gactcaccgg cctcgcggcg ctgcggcgct tcgtcgagcg
     1981 cggcggactg ctcgtggtgg aagggaacag ctcgcgcatc ccgatcgact tcgggctcgt
     2041 gcccacggtg agcgtggtgc cgtcgcagaa gctgctcgcc cgcggcgggg tatatcgcgc
     2101 gcagctcatg atgccggaga gccccatcgc ctatggctac gagcgcacga gctttccgct
     2161 ctacttcaac caggcgccgc tcatgacggt gcaggcggcg ccgtccccgg cgcagcggcc
     2221 cgtcggggtg gacagcgcga tcaccaacgc gaccgaacgg atgcgcgcgc ggacgatcgt
     2281 gcgctggacg ccgaaggccg acgagctgct catctcgggg ctgctggact cgggtgacga
     2341 gatggccggc cgcgccacgg tcgtggatgc cccgctcggc aggggccacg tggtgctctt
     2401 cggcacccgg ccgatgtggc gctgggagtc gcagggcgcg ttcgccctca tgctcaacgc
     2461 gatggccaac tggagctcgc tcgacatcaa tcagcgcgcg ccgacgacgg cgcccgtcgc
     2521 tgccgcggcc gcatcgaccg gccgatagcg ctatacttca ccgcagatca ccgacagaac
     2581 cgcacatgaa gatctcgatc gaatactgca ccctttgaag ctacgaaccg cgggccgccg
     2641 gtctggcggc cgagatcacg gagcatttcc ccgaggcacg cgtggagcta aagccgagct
     2701 caggcggccg gttcgaagta ctgcga
//
LOCUS       DASSYW010000882         3015 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1164920, whole genome shotgun sequence.
ACCESSION   DASSYW010000882 DASSYW010000000
VERSION     DASSYW010000882.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3015)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3015)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3015
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1164920"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..320)
                     /locus_tag="VFN38_14010"
     CDS             complement(<1..320)
                     /locus_tag="VFN38_14010"
                     /inference="COORDINATES: protein motif:HMM:NF014898.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HET9012935.1"
                     /translation="MSDAERRERAFLLHGFADYVALEQGLSPRTQEAYRRDLLRFAEY
                     AAAKGAAAPPDVTARLLREYVYHLKDLGLSPASIRRNVSAIRTWFRFLTGDGIVVRDP
                     SERL"
     gene            complement(317..934)
                     /locus_tag="VFN38_14015"
     CDS             complement(317..934)
                     /locus_tag="VFN38_14015"
                     /inference="COORDINATES: protein motif:HMM:NF020893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HET9012936.1"
                     /translation="MVQSVLQWLAGLPSVVLYLSLAAFAALENVFPPLPTDTVVAFGT
                     WLAARGQGSALMAFACTWLGNVVGAAAMYEVGRRHGSAWMRRRFPRLADARGEARLRA
                     LYERYGIAALVVSRFIPGVRALVPPFAGALRVPAVPAIAAMAVASLVWYGLISWLAWR
                     AGSDWDAVTALIARSGRIITVVASAIALIVALVWYRHQRQARLEP"
     gene            complement(936..1427)
                     /gene="ispF"
                     /locus_tag="VFN38_14020"
     CDS             complement(936..1427)
                     /gene="ispF"
                     /locus_tag="VFN38_14020"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008685 - 2-C-methyl-D-erythritol
                     2,4-cyclodiphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="HET9012937.1"
                     /translation="MTERLTTRSGIGYDSHRFAPGGPMVLGGVRIPSGVHLHGHSDGD
                     AIAHAVTDAVLGAAALGDIGEMFSDKDSANAGRDSIEMLELAIARVHAAGWRVGQLDV
                     VVIAETPRITPHRDAMRARIAGAVGIAAADVSIKGKSNEGMGFVGRGEGLACLATATL
                     VRA"
     gene            complement(1467..2711)
                     /gene="fabF"
                     /locus_tag="VFN38_14025"
     CDS             complement(1467..2711)
                     /gene="fabF"
                     /locus_tag="VFN38_14025"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HET9012938.1"
                     /translation="MRRRVVVTGLGAVTPLGNDVATTWRAMRDGRSGAANITKFDAAN
                     FPVRFACEVKGFDPLLSMDRKEAKRADQYTQYAVAASVEAMKDAGLVDGGFDVDRTGV
                     IVGSGIGGLKSFEEQHDIYRERGVSKISPFFIPMFIADIASGVVSMRFNARGPNYATV
                     SACATSAHAIGDAFRTIQYGDADVMISGGAEATVTPMAIGGFANMTALSRRNDSPETA
                     SRPFDATRDGFVMGEGAGIVVLEELEHALKRGARIYGEVVGYRATGDAYHLTGQLPDH
                     EGLQRAMRGAMTDGSLTPADVDYVNAHGTSTPLNDSNEAKAIATVLGDAAKRVSVSST
                     KSMTGHMLGAAGSVEFIACTLAIRDQVVPPTINHGTPDPECCGLDFTPNTAREREVRA
                     ALSNSAGFGGHNVSLAVKRFQG"
     gene            complement(2711..2950)
                     /locus_tag="VFN38_14030"
     CDS             complement(2711..2950)
                     /locus_tag="VFN38_14030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HET9012939.1"
                     /translation="MADNAQKVRDIIEKELGVERDKMTDQASFIEDLGADSLDIVELV
                     MEFEKEFNIDIPDEDAEKMRTVGDAVAYLNSKVGA"
BASE COUNT          446 a         1028 c         1089 g          452 t
ORIGIN      
        1 tcgagccgtt cgctggggtc gcggacgacg atcccgtcac cggtgaggaa gcggaaccag
       61 gtccggatcg ccgacacgtt gcgccggatc gaggccggcg agaggccgag atccttcagg
      121 tggtacacgt actcgcgcag cagccgcgcg gtgacgtcgg gtggcgccgc cgctcccttg
      181 gccgcggcgt attcggcgaa gcgcagcagg tcgcggcggt acgcctcctg ggtgcggggc
      241 gagagtccct gctccagcgc cacgtagtcg gcgaagccgt ggagcaggaa cgcccgctcc
      301 cggcgctcgg cgtcgctcac ggctcgaggc gggcctggcg ttgatgccgg taccagacca
      361 gggcgacgat cagggcgatg gccgaggcga ccacggtgat gatgcgtccg gagcgcgcaa
      421 tcagcgccgt gacggcatcc cagtccgagc cggcgcgcca cgcgagccag ctgatgagcc
      481 cataccagac gagcgacgcc acggccatgg cggcgatggc cggcacggcg gggacgcgca
      541 gcgcgccggc gaacggcggc acgagggcgc ggaccccggg aatgaaccgg ctcacgacga
      601 gcgcggcgat gccgtagcgc tcgtacagcg cgcgcagccg cgcttcgccc ctggcgtcgg
      661 cgaggcgggg gaagcgccgc cgcatccacg cgctgccgtg acggcggccc acctcgtaca
      721 tcgccgccgc gccgacgacg ttgccgagcc aggtgcacgc gaacgccatc agcgcgctcc
      781 cctgcccgcg ggccgcgagc caggtgccga acgccacgac ggtgtccgtg ggcaggggcg
      841 gaaagacgtt ctccagcgcg gcgaaggcgg cgagcgagag atagagcacg accgacggca
      901 ggccggccag ccactgcagc accgactgca ccatgctagg cgcggacgag ggtggcggta
      961 gcgaggcagg cgaggccctc accgcggccg acgaacccca tcccttcgtt gctcttcccc
     1021 ttgatgctca cgtcggcggc ggcgatgccg acggcgccgg cgatgcgcgc gcgcatggcg
     1081 tcgcgatgcg gggtgatcct gggcgtctcg gcgatcacga cgacgtcgag ctggccgacg
     1141 cgccaaccgg ccgcgtgcac gcgcgcgatc gcgagctcca gcatctcgat cgagtcgcgc
     1201 cccgcgttgg cggagtcctt gtcggagaac atctcgccga tgtcgccgag cgccgcggcg
     1261 cccaggacgg cgtccgtcac ggcatgggcg atggcatcac cgtccgaatg accgtgcagg
     1321 tggacgccgc tcgggatgcg cacgccgccg aggaccatcg gcccgccggg ggcgaaccga
     1381 tgggagtcgt agccgatgcc gctgcgggtg gtgagtcgct cggtcatcgt acgtccgcgt
     1441 ggcgcgtacg aggcgggcgc acgccgtcag ccctggaagc gcttgacggc gagcgagacg
     1501 ttgtgaccgc cgaatcccgc gctgttgctc agcgccgcgc gcacctcgcg ctcgcgcgcg
     1561 gtgttcggcg tgaagtcgag gccgcagcac tcggggtccg gcgtaccgtg gttgatcgtg
     1621 ggcggcacga cctgatcgcg gatggccagc gtgcaggcaa tgaactccac cgagccggcc
     1681 gccccgagca tgtggcccgt catcgacttg gtcgaggaca cgctcacgcg cttggccgcg
     1741 tcgccgagca cggtggcgat ggccttggcc tcgttcgagt cgttgagcgg cgtggacgtg
     1801 ccgtgcgcgt tgacgtagtc cacgtccgcc ggcgtgaggc tgccgtcggt catggcaccg
     1861 cgcatggcgc gctggagccc ctcgtgatcg gggagctgtc cggtgaggtg ataggcgtcg
     1921 ccggtcgcgc gatagccgac cacctccccg tagatgcggg cgccgcgctt gagggcgtgc
     1981 tccagctcct cgagcaccac gatgccggcg ccttcgccca tgacgaaccc gtcgcgcgtc
     2041 gcgtcgaacg ggcgcgaggc cgtctccgga ctgtcgttgc ggcgcgagag cgccgtcatg
     2101 ttggcgaagc cgccgatggc catcggcgtc acggtggcct cggcgccgcc cgagatcatg
     2161 acgtcggcgt cgccgtactg gatggtccgg aaggcgtcgc cgatggcgtg cgcgctggtg
     2221 gcgcatgccg acacggtggc gtagttgggg ccgcgcgcgt tgaagcgcat ggacaccacg
     2281 cccgatgcga tgtcggcgat gaacatcggg atgaagaagg ggctgatctt gctgacgccc
     2341 cgctcccgat agatgtcgtg ctgctcctcg aagctcttga ggccgccgat gccgctgccg
     2401 acgatgacgc cggtgcggtc gacgtcgaag ccgccgtcga cgagcccggc gtccttcatc
     2461 gcctcgaccg acgcggcgac ggcgtactgg gtgtactggt ccgcccgctt cgcctccttg
     2521 cgatccatgg acagcagcgg gtcgaacccc ttcacctcgc aggcgaagcg gacggggaag
     2581 ttcgccgcgt cgaacttggt gatgttcgcc gcgcccgacc gaccgtcccg catggcgcgc
     2641 caagtcgtcg ccacgtcgtt gccgagtggc gtaacggcac cgagaccagt gacgacgacc
     2701 cgacgccgca ttacgctccg accttgctgt tcaggtacgc cacggcatcg ccgacggtac
     2761 gcatcttctc cgcgtcctcg tccgggatgt cgatgttgaa ctccttctcg aactccatga
     2821 ccagctcgac gatgtcgagg ctgtcggcgc cgagatcctc gatgaagctg gcctgatccg
     2881 tcatcttgtc gcgctcgacg ccaagctcct tctcgatgat gtcgcggacc ttctgggcgt
     2941 tgtcagccat gtgtcgggct cctgtagtgt ttttgaacgc gggaaagtta gccaaagttc
     3001 gtgcgaaatg tcacg
//
LOCUS       DASSYW010000883         3111 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1195479, whole genome shotgun sequence.
ACCESSION   DASSYW010000883 DASSYW010000000
VERSION     DASSYW010000883.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3111)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3111)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3111
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1195479"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..611
                     /locus_tag="VFN38_14035"
     CDS             <1..611
                     /locus_tag="VFN38_14035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012940.1"
                     /translation="VPIRNGEFVLSELPAGTWVVEAREIGSEPGAALVDVPVRGTVPV
                     TIALGERAQVLDAITVRGRRGGNQRILSAIASRRSASTGTVFLPDDPYLVSAYDPADV
                     ARNAPGFRYVSAEVLLASGCGFRYPPADQPTMPSGTARSRTRVLAVYLDGARVAGGLA
                     ELRTSVNMRDVLAVEAYQDIATAPLEWRTYDACAVLAIWTKR"
     gene            712..1149
                     /locus_tag="VFN38_14040"
     CDS             712..1149
                     /locus_tag="VFN38_14040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012941.1"
                     /translation="MSSKMVWVGMFACVASACAAKAPVSGSSDDRPVTASRDRNLITQ
                     ADLDADPTLRAQSVIEVIRALRPQFLNDHGTNTLQGAGMSDPEAGKVHVSIDNGRIVP
                     LSELSGMHGGQMIEIRYLNVAQAMQKFGTAARQGPVILVITTR"
     gene            complement(1254..2747)
                     /locus_tag="VFN38_14045"
     CDS             complement(1254..2747)
                     /locus_tag="VFN38_14045"
                     /inference="COORDINATES: protein motif:HMM:NF024181.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SusD/RagB family nutrient-binding outer membrane
                     lipoprotein"
                     /protein_id="HET9012942.1"
                     /translation="MHFTRYSVALLTVGALASTACQTDLTGLNTNPNNPTTAPATTLF
                     TKAVSTEVPRFAGNTLSSTSLLAQHIAQVQYVDEDRGHVRPTTYDAFWASYANGLEDL
                     EKVAALGTAAASPNTTGPARVMQSWAFQNLTDVFGDVPYSEALKGDVVGGPTKPKYDK
                     QQDIYAGVLKTLTDASATMGSAEPGLGASDPIYKGDMAKWRKFSNSLRARMAMRMSKV
                     DAAKASTELAAAFAAPGGVMTANTDNAALVWPGDGVFDNPWASNFAGRDDHRVSKTLL
                     DTMTALSDPRVPIYAQPTKADPTKYIGLQNGMDNVTVTPFFNTTSRPGAIFYPGATVY
                     GTFGTAAGKKTPSFILTYAEVSFIKAEAANRGIGGLTAAAAAGFYNDGVRASILQWGG
                     SDADADAYLARPGVAYAGGAAGLQQIGLQKWIALYTQGTEAWSEWRRTGNPASIVMGP
                     KAYADTPTVPRRFLYPVSEASVNLASLKAAIANQGPDAYATRVWWDK"
     gene            complement(2771..>3111)
                     /locus_tag="VFN38_14050"
     CDS             complement(2771..>3111)
                     /locus_tag="VFN38_14050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012943.1"
                     /translation="IDAATGKPNTTVVTAEDYRHSIYPVVEPYIFNSGFVKLRETRLS
                     WEVPTRFTSRLKVAQLSMALVGRNLLMWTDYPNYDPENATNADNAGQGFEMGSLPTTK
                     SIGINLTITP"
BASE COUNT          458 a         1017 c         1106 g          530 t
ORIGIN      
        1 aggtgccgat ccggaacggc gagttcgtgc tgtcggagct tcccgccggc acgtgggtgg
       61 tggaggcgcg cgagatcggc agcgagcccg gcgccgcgct cgtcgacgtc ccggtgcgcg
      121 gcaccgtgcc cgtgacgatc gcgctcgggg agcgggcgca ggtgctggac gcgatcaccg
      181 tgaggggacg gcgtggcggc aatcaacgga tcctcagcgc gatcgccagc cggcggagcg
      241 cgtcgaccgg gacggtgttc cttcccgacg atccgtatct cgtctccgcg tacgacccgg
      301 cggacgtcgc gcggaacgcg ccgggattca ggtacgtcag tgccgaggtg ctgctcgcga
      361 gcggctgcgg attccggtat ccgccggcgg atcagccgac gatgccgagc gggacggcgc
      421 gatcgcgaac gcgggtgctg gccgtctatc tcgacggtgc gcgcgtcgcc ggcgggctgg
      481 cggagctgcg cacgtcggtc aacatgcgcg acgtcctcgc ggtggaagcg tatcaggaca
      541 tcgcgacggc accactcgag tggcggacgt acgacgcgtg cgccgtgctc gcgatctgga
      601 cgaagcgctg aagtcatgcg tcgtctcgtg ggcgcgcggc gccggctcgt cttgcgacgg
      661 gctcggcgcg ggcgcagtat tggttcctta ccctccgcag gagtagctct cgtgtcttcg
      721 aagatggtct gggtgggcat gttcgcctgc gtcgcgagcg cgtgcgccgc gaaggccccg
      781 gtgtcgggct cgagcgacga tcggccggtg acggcgtcgc gcgatcgtaa cctcatcacg
      841 caggcggatc tcgatgcgga cccgaccctg cgtgcgcaat ccgtgatcga ggtcattcgg
      901 gcgctccgcc cgcagttcct caacgatcac gggacgaaca ccctccaggg tgcggggatg
      961 tccgatcccg aggcggggaa ggtgcacgtg tccatcgaca acggtcgcat cgtgccgctc
     1021 tcggagctga gcggaatgca cggcggccag atgatcgaga tccggtacct gaacgtcgcg
     1081 caggcgatgc agaagttcgg cacggcggcg cgccagggtc cggtcatcct cgtcatcacc
     1141 acccggtagc ggatgcgcgg cagtcgttcc gccgtcgaag ggacaggatg cgagacgggg
     1201 cactccactg gagtgccccg tccgcgttcc gatcagctat ccgatccgct gcgctacttg
     1261 tcccaccaca cccgggtggc gtacgcgtcc ggtccctgat tggcgatcgc cgccttgagc
     1321 gacgccaggt tgaccgacgc ttcggagacc ggatagagga agcgacgcgg caccgtcggc
     1381 gtatcggcgt acgccttggg gcccatcacg atcgacgccg gattgcccgt gcgccgccac
     1441 tcgctccacg cttccgtgcc ctgggtgtag agcgcgatcc acttctgcag cccgatctgc
     1501 tgcagtcccg cggcgccgcc cgcgtaagcg acgcccggcc gcgcgagata cgcatccgcg
     1561 tcggcgtcgc taccgcccca ctggaggatc gaggcccgca cgccgtcgtt gtagaaaccg
     1621 gctgccgcgg cggcggtgag cccaccgatg ccgcgattgg ccgcctcggc cttgatgaac
     1681 gacacctcgg cgtacgtgag gatgaacgac ggcgtcttct tgccggcggc cgtgccgaac
     1741 gtgccgtaca ccgtggcgcc cggatagaag atcgccccgg gacgcgaggt ggtgttgaag
     1801 aacggcgtca ccgtgacgtt gtccatcccg ttctgcaggc cgatgtactt cgtgggatcg
     1861 gccttggtcg gctgggcgta gataggcacg cgcggatcgc tcagcgcggt catggtgtcg
     1921 agcagcgtct tggacacgcg atgatcgtcg cggccggcga agttcgaggc ccacggattg
     1981 tcgaacacgc cgtcaccggg ccacaccagc gcggcattgt cggtgttggc cgtcatcacg
     2041 ccacccggcg cggcgaaggc cgcggcgagc tcggtggacg ccttcgcggc gtcgaccttc
     2101 gacatgcgca tggccatgcg cgcgcgcagc gagttggaga acttcctcca cttcgccatg
     2161 tctcccttgt agatcggatc ggaggcaccg agcccgggct cggcggaccc catcgtcgcg
     2221 gaggcatcgg tcagcgtctt gagcacgccg gcatagatgt cctgctgctt gtcgtacttc
     2281 ggcttcgtcg gtccacccac gacgtcgccc ttcagcgcct cgctgtaggg cacgtcgccg
     2341 aagacgtccg tcaggttctg gaacgcccac gactgcatga cccgcgcggg gcccgtggtg
     2401 ttcggcgatg cggcggcggt gccgagcgcg gcgaccttct cgaggtcctc caggccgttg
     2461 gcgtaggacg cccagaacgc gtcgtacgtc gtgggacgga cgtggccgcg atcctcgtcc
     2521 acgtactgca cctgcgcgat gtgctgcgcg aggagcgacg tcgacgagag cgtgttgccc
     2581 gcgaagcgcg gcacctccgt ggacaccgcc ttggtgaaca gcgtcgtcgc cggcgccgtg
     2641 gtcggattgt tcgggttggt gttgagaccc gtcagatcgg tctggcacgc cgtcgacgcg
     2701 agtgcgccga cggtgagcaa cgcgaccgaa tatcgagtga agtgcatccg tatgtgctcc
     2761 cggtggacgg tcacggcgtg atcgtcaggt tgatgccaat ggacttggtc gtcggcaggg
     2821 accccatctc gaagccctgg cccgcgttgt cggcgttggt ggcgttctcc ggatcgtagt
     2881 tcgggtagtc cgtccacatc aggagattgc gaccgacgag cgccatgctc agctgagcga
     2941 ccttcaggcg cgaggtgaac cgcgtcggca cctcccagct caggcgcgtc tcacgcagct
     3001 tgacgaagcc ggagttgaag atgtacggct cgacgaccgg gtagatgctg tgccggtagt
     3061 cctcggccgt gacgaccgtg gtgttcggct tgccggtcgc ggcatcgatg c
//
LOCUS       DASSYW010000884         2890 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1312828, whole genome shotgun sequence.
ACCESSION   DASSYW010000884 DASSYW010000000
VERSION     DASSYW010000884.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2890)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2890)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2890
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1312828"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..747)
                     /locus_tag="VFN38_14055"
     CDS             complement(<1..747)
                     /locus_tag="VFN38_14055"
                     /inference="COORDINATES: protein motif:HMM:NF015592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012944.1"
                     /translation="MLRRPVEVPPVHVYPADEWRIVESRFHEGFHARAETVLALANGY
                     VGIRGTFDEGRPSLSPGTFVNGFHETWPIVHAEDAYGLARTGQTIVNVPDATIIRLYV
                     DDEPLFVPTARLTHYERALDMRDGTLSRHLEWTTPAGKHVRVRSCRLVSLEQRHVAAI
                     SYEVTLLDRDAPIAITSEVLNRQDTGQCRSRAPGFDPRQATPLTQRVLHADIAEVDGD
                     RILLGYRTAASGMTLALGVDHIVEAAQPLQT"
     gene            complement(1057..>2890)
                     /locus_tag="VFN38_14060"
     CDS             complement(1057..>2890)
                     /locus_tag="VFN38_14060"
                     /inference="COORDINATES: protein motif:HMM:NF015155.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MMPL family transporter"
                     /protein_id="HET9012945.1"
                     /translation="RIEEFGDASANKQLNESFEDDFRRAEVTSLPITLLILLLAFAAV
                     VAALVPLLLAATAVAAAIGLLGPLSRAWPIDDSVTSVVLLVGLAVGVDYSMFYLRRKL
                     EERDRGSSSEAALETAAATSGRAVLISGMTVIVAMAGMFLAGNAVFTSFAVGTITVVA
                     VAMLGSVTVLPALLATLGDRVEWGRVPFIARGRHRGEPRIWGAVLDRVLRRPALSLSL
                     GAGLLLAAAIPAIWMHTMSPGASGLPRHLPIVQTYDRMQAAFPGGPLPAAIVVHADDV
                     TTPAITNGIAGMIERARAGGRITGPDSVTVSPDKTVAVVTLPLPGNGTDAVSDAALAE
                     LRTEVVPATIDRVAGTETNITGLTAASRDFNDVMKARLPIVVAFVLGLAFVLLLRVFH
                     SLVIPVTAIALNLLSVAAAYGVVKLIFQDGNLESILGFESLGGVISWLPLFLFVVLFG
                     LSMDYHVLILSRVQEAVDDGMPTDRAVSHAIKATAGVVTSAAVVMVAVFSIFATLGAI
                     EFKQFGVALGVAVLVDATIVRAVLLPSAMTLLGHRNWYLPRWLEWAAGRHTPPIAASG
                     RSPEPTTQTGDGRLEPPASPISPPAAPPNAPADRAPSSKKVTVR"
BASE COUNT          479 a          979 c         1034 g          398 t
ORIGIN      
        1 cgtctggagc ggctgggcgg cctcgacgat gtggtcgacg cccagcgcga gcgtcatccc
       61 gctggccgcg gtcctgtagc cgagcaggat ccggtcaccg tcgacctcgg cgatgtccgc
      121 gtgcaggacg cgctgtgtca acggcgtcgc ctgccgagga tcgaacccgg gcgctctgga
      181 tcggcactga ccggtgtcct gccggttgag cacctcggag gtgatcgcga tcggcgcgtc
      241 gcggtcgagc agcgtcacct cgtagctgat cgccgcaacg tggcgctgct cgagcgacac
      301 gagccggcac gaccggacgc gaacgtgctt gcctgccgga gtcgtccatt ccaggtgtcg
      361 cgacagtgtg ccgtcgcgca tgtccagggc acgctcgtag tgcgtcagcc gcgcggtcgg
      421 gacgaacagc ggctcgtcgt cgacgtagag tcggatgatc gtcgcatcgg gcacgttgac
      481 gatcgtctgg ccggtgcggg cgaggccgta ggcgtcctcg gcgtgcacga tcggccaggt
      541 ctcgtggaac ccgttgacga acgttcccgg agacaacgac ggacgccctt cgtcgaaggt
      601 gccgcggatc ccgacgtagc cgttcgccag cgccaggacg gtctcagcac gcgcgtggaa
      661 accctcgtgg aagcgcgatt caacgatgcg ccactcatcg gccgggtaca cgtgcaccgg
      721 cggcacctcg accggtcgcc taagcatccc gcacgctccc cggcgggtgt ccaacgcgct
      781 gaggctcgac ctcgaccatg cgatgacgca ctggtgcgct cgggatgcga agcggggaac
      841 cgtcacgaca cggttcggcg cgtggtctga tgcgggatgt accagcgggc gcgtgcgtcg
      901 cgagcgcatc tgctcgagcc aaggccaggt cgggcacgcc tcgcgcgatg agcacctcgg
      961 acatccccgt caccgcctcc gcgtacacac cgcgaaagcg aaccggctcc cgcgagcccg
     1021 cgacgagttc attgaccggg agcagtcgcg tcccggtcac cggacagtga ccttcttcga
     1081 gctcggagcc cggtccgcgg gtgcgttcgg tggcgctgca ggcgggctga tcggtgatgc
     1141 aggcggctcg aggcgcccgt ctccagtctg cgtggtcggt tccggggaac gcccggaggc
     1201 tgcgatcggc ggtgtatgtc gtcccgcggc ccactccagc caccgcggga gataccagtt
     1261 gcggtggccc agcagcgtca tcgcggaagg caggagcacg gcgcggacga tcgtggcgtc
     1321 gacgagcacg gcgacgccga gggcgacgcc gaactgcttg aactcgatcg cgccgagcgt
     1381 ggcgaagatc gagaagacgg ccaccatcac gaccgcagcg ctggtgacca cgccggcggt
     1441 cgccttgatc gcgtggctga cggcgcgatc ggtcggcatg ccgtcgtcga ccgcctcctg
     1501 cacgcggctg aggatgagaa cgtggtagtc catcgagagc ccgaagagca ccacgaacaa
     1561 gaagagcggc agccatgaga tcacgccgcc gagcgactcg aagccgagga tcgactccag
     1621 gttgccgtcc tggaagatca gcttgaccac accgtaggcg gcggcgacgg acagcaggtt
     1681 caacgcgatc gcggtgaccg ggatgacgag cgagtggaac acgcgcagca gcagcacgaa
     1741 ggccagcccg agcacgaacg ccacgacgat cggcaggcgg gccttcatga cgtcgttgaa
     1801 gtcccgcgac gcggcggtca ggccggtgat gttcgtctcc gttcccgcaa cgcggtcaat
     1861 cgtcgccggg acgacttccg tcctcagctc ggccagcgcc gcgtccgata ctgcgtcggt
     1921 gccgttgccg ggcagtggca gcgtcacaac ggcgacggtc ttgtcagggc tgacggtgac
     1981 gctgtctggt ccggtgatgc gcccgccggc gcgggcgcgc tcgatcatcc cggcgatgcc
     2041 gttggtgatc gccggcgttg tcacgtcgtc ggcgtgcacg acgatcgccg ccgggagcgg
     2101 cccgcccggg aacgcggcct gcatgcggtc gtaggtctgc acgatcggca gatgccgcgg
     2161 cagcccggag gcgccgggcg acatcgtgtg catccagatc gccgggatgg cggcagccag
     2221 cagcaggccg gcgccgagcg acaacgaaag ggcgggccgg cgcaggaccc ggtccaggac
     2281 agcgccccag atccgcggct cgccgcggtg ccggcctcgc gcgatgaacg gcacgcggcc
     2341 ccattcgacg cgatctccga gcgtggcgag gagtgccggc agaaccgtga cggaacccag
     2401 catcgccacg gcgacgacgg tgatcgtgcc gaccgcgaac gaggtgaaga ccgcgttgcc
     2461 ggccaggaac atgccggcca tcgccacgat cacggtcatc ccggagatca gcactgcccg
     2521 gccggacgtc gcagcggccg tctcgagcgc cgcctcgctg gagctcccgc ggtcgcgctc
     2581 ctcgagctta cggcgcagat agaacatcga gtagtcgacc ccgaccgcga gcccgaccag
     2641 gagaacgacc gaagtgacgg agtcgtcgat cggccaggcc cggctgagcg gaccgagcag
     2701 gccgatcgcg gcggcgaccg cggtcgccgc cagcaacagc ggcaccagcg cggcgacgac
     2761 tgcggcgaac gcaagcagga ggatcagcag cgtgatcggg agggaggtca cctcggcccg
     2821 gcggaagtcg tcctcgaacg actcgttgag ctgcttgttc gcgctcgcgt ccccgaactc
     2881 ctcgatccgg
//
LOCUS       DASSYW010000885         4011 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1541605, whole genome shotgun sequence.
ACCESSION   DASSYW010000885 DASSYW010000000
VERSION     DASSYW010000885.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4011)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4011)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4011
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1541605"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..801
                     /gene="argB"
                     /locus_tag="VFN38_14065"
     CDS             <1..801
                     /gene="argB"
                     /locus_tag="VFN38_14065"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: protein motif:HMM:TIGR00761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003991 - acetylglutamate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HET9012946.1"
                     /translation="HRRVRGAPDVTATRVIKVGGRPQLDAALPAALAAAHRTAPGSLV
                     VVHGGGDEVSTLQKLYGVVAQFTGGRRVTSALDLEIVRMALSGSANKRLVAALNDVGV
                     PALGLSGEDAGLLRARPTDRAQYGFVGTPSAVNVSLLRHLAQGGYLPVLSPVSRSDDP
                     AAGATLNVNGDDAASAIAVALAADELLLVSDVEGVRVEGTAVARLDVDEALRLVEDGT
                     AAGGMAAKLQAAVAALEGGVGRVRISDIAAIGQRDRGTVLTRVGSTCA"
     gene            798..2039
                     /locus_tag="VFN38_14070"
     CDS             798..2039
                     /locus_tag="VFN38_14070"
                     /inference="COORDINATES: protein motif:HMM:NF002325.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_process: GO:0006525 - arginine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetylornithine/succinylornithine family
                     transaminase"
                     /protein_id="HET9012947.1"
                     /translation="MTAPTMKPIDQATSGSAHEAQPGSAGQPAGMESPILGTYKRAPV
                     EFVRGSGVHLYDAEGKAYLDFVSGIAVNALGYEDAGLKAAMHAAADGLVHTSNLYSTS
                     PGERLAAALVAKSFADKVFFCNSGAEANEGAFKFARRWARTKGDAKHEIVALRGAFHG
                     RLFGTLAATDRPAYRLPFRPLTPGVSIFERDLAELDAALSEDTVAALILEPVQGEGGV
                     RVLDPGFLRELRAVTKARNIAMILDEIQCGLGRTGTLFAYERAGIEPDMVTLAKPLAG
                     GLPMGAVLMTRAIAESIKPGDHGTTFGGGPFVASVALHVLERLSDPALLAHVTEVGEW
                     FGHELNEIAHRTSRIRQVRGAGLMWGIDVMGTAATVVSESLARGLLVCSAGDYTVRML
                     PPLVATRDELARGLSILEEVL"
     gene            2039..2536
                     /locus_tag="VFN38_14075"
     CDS             2039..2536
                     /locus_tag="VFN38_14075"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF025054.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HET9012948.1"
                     /translation="MAPDLFVRRARPADAVAISELNNTSANEGQMLKRTPETIALAID
                     DYVVVQNAAGALLACGALKEYSPSVAEVAAIAVSRDAHGKGLGRAIVGAVEALAHKRG
                     IFDVFALTLQPEFFAAIGYERVDRARYPEKIRRDCLGCARRFACNEICFAKNLMAERA
                     VALAA"
     gene            2621..>4011
                     /locus_tag="VFN38_14080"
     CDS             2621..>4011
                     /locus_tag="VFN38_14080"
                     /inference="COORDINATES: protein motif:HMM:NF013799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HET9012949.1"
                     /translation="MLAALVLAPGSMAAQYARAAADRPRLVVFITVDQFRPDYLDRWA
                     TQLTGGLARLSTRGAFFTNAFQDHAVTETAPGHSVTMSGRFPRSTGILRNTAGVEDPQ
                     APLLTSRDAPASPYRFRGSVLFDWIRTRDASARALSISRKDRGAILPLGRAKQSVFWY
                     ATTNGEFTTSRYYADTLPEWIRRVNARRVPQRRAGQSWSLLLPDGSYREPDDVAVENN
                     GRNVSFPHALPADTVAAAGQLPYTPWMDQFTIDAALEGMEALQLGRGPQTDLLAVSLS
                     ATDYIGHRYGPDSREQHDNVLRLDRALGVFIDSLYKLRDSSTIVFALTADHGVTSFPE
                     LVAQRAGRPAPPRYDLLPAVAGLKSALRQARVDTNAVSLDGPLVSVDRTAFAEAGVDA
                     GSILGRFLDVVRATPAIVRVDRVRDLASRDTVRDAVARRWVHMIPPDSPVEYVITPRE
                     GAYPAAATIAEHGA"
BASE COUNT          560 a         1438 c         1411 g          602 t
ORIGIN      
        1 catcgacgag tgcgcggggc tcccgacgtg acggcgacgc gcgtcatcaa ggtcggcggg
       61 cgcccgcagc tcgatgccgc cctgccggcc gcgctcgccg cggcgcaccg gacggcgccg
      121 ggctcgctcg tcgtcgtgca cggcggcggt gacgaggtga gcacgctgca gaagctgtac
      181 ggcgtggtcg cgcagttcac cggcggccgt cgcgtcacga gcgcgctcga cctggagatc
      241 gtccgcatgg cgctctcggg ctcggcgaac aagcgcctcg tcgccgcgct caacgacgtg
      301 ggcgtgccgg cgctcggcct gtcgggcgaa gatgccgggc tgctgcgcgc gagaccgacg
      361 gaccgcgcgc agtacggttt cgtcggcacg ccgagcgcgg tgaacgtctc cctgctccgt
      421 cacctggcgc agggtgggta tctccccgtg ctgtcgccgg tgagccggag cgacgatccg
      481 gcggccggcg ccacgctgaa cgtgaacggc gacgatgccg cctccgccat cgccgtcgcg
      541 ctcgcggccg acgagctcct gctggtctcg gacgtggagg gcgtgcgcgt ggagggcacg
      601 gcggtggcgc ggctcgacgt ggacgaggcg ctgcggctgg tggaggatgg aacggcggcc
      661 ggagggatgg cggccaagct ccaggcagcc gtcgccgcgc tggaaggagg ggtgggacga
      721 gtccggatct ctgacatcgc cgcgatcggc caacgcgatc gcgggacagt actcacgcga
      781 gttgggagca catgcgcatg acggcaccga cgatgaagcc aatcgaccag gcaaccagcg
      841 gctcggcaca cgaggcgcag cccggcagcg ccggtcagcc cgcgggcatg gagagcccca
      901 tcctcggcac gtacaagcgt gcgccggtgg agttcgtgcg cggcagtggc gtccacctct
      961 acgacgccga gggcaaggcg tacctcgact tcgtgagcgg gatcgccgtg aacgcgctcg
     1021 gctacgagga cgccggtctc aaggcagcga tgcatgccgc ggcggacggg ctcgtccaca
     1081 cgtcgaacct ctacagcacg tcacccggcg agcgcctggc cgccgcgctc gtggcgaagt
     1141 cgttcgccga caaggtcttc ttctgcaact ccggcgcgga agccaacgaa ggcgcgttca
     1201 agttcgcccg gcgctgggcg cgcacgaagg gcgacgccaa gcacgagatc gtcgccctgc
     1261 gcggcgcctt ccacggccgg ctgttcggca cgctcgccgc cacggatcgt ccggcgtacc
     1321 gtctgccgtt ccgtccgctc acgcccggcg tgtcgatctt cgagcgcgac ctcgccgagc
     1381 tcgatgccgc gctgagcgag gacacggtgg ccgcgctcat cctggagccg gtgcagggcg
     1441 agggcggcgt gcgggtgctg gatccgggct tcctgcgcga gctgcgcgcc gtgacgaagg
     1501 cgcgcaacat cgcgatgatc ctcgacgaga tccagtgcgg ccttggccgc actgggacgc
     1561 tgttcgccta cgagcgtgcg ggcatcgagc cggacatggt gacgctcgcg aagccgctgg
     1621 ccggcgggct gccgatgggc gcggtcctca tgacgcgcgc gatcgccgag tcgatcaagc
     1681 cgggtgacca cggcacgacg ttcggcggcg gcccgttcgt cgcgtccgtc gctctccacg
     1741 tgctggagcg gctgtccgat cccgcgctgc tcgcgcacgt gacggaggtc ggcgagtggt
     1801 tcggccatga gctgaacgag atcgcccacc gcacgagtcg catccggcag gtgcggggtg
     1861 cggggctgat gtggggcatc gacgtgatgg gtacggcggc caccgtcgtg agcgaatcgc
     1921 tcgcgcgcgg cctcctggtc tgctccgccg gcgactacac ggtgcgcatg ctgccgccgc
     1981 tcgtggcgac gcgcgacgag ctcgcgcgcg gtctctccat tctcgaggag gtcctctgat
     2041 ggcccctgat ctgttcgtgc gacgtgcgcg tccggccgat gcggtggcga tctcggagct
     2101 caacaacacc tccgccaatg aagggcagat gctgaagcgg actcccgaga cgatcgccct
     2161 cgcgatcgac gactacgtgg tcgtgcagaa cgccgccggc gcgctgctcg cctgcggcgc
     2221 cctcaaggag tattcgccca gcgtggccga ggtggcggcg atcgcggtgt cccgggatgc
     2281 gcacgggaag ggcctcggac gcgcgatcgt cggtgccgtg gaagcgctgg cgcacaagcg
     2341 gggcatcttc gacgtcttcg cgctcaccct ccagcccgag ttcttcgccg ccatcggcta
     2401 cgagcgcgtc gatcgggcgc ggtatcccga gaagatccgt cgcgactgcc tcggctgcgc
     2461 tcgccgcttc gcctgcaacg aaatctgctt cgcgaagaac ctcatggccg agcgcgccgt
     2521 cgcgctggcg gcgtaggagg gcgtaccccc gggttagatt ccggcatccg tcgttcgtcg
     2581 cgcccccgag ccaacgagat cgatgcgccg tttcgctcca ttgctcgccg cccttgtcct
     2641 cgcgccgggc tcgatggccg cgcaatacgc ccgcgccgcg gctgaccggc cgcgactcgt
     2701 cgtgttcatc accgtcgacc agttccgacc cgactacctg gatcgatggg cgacccagct
     2761 caccggcggg ctcgcccggc tgtcgacgcg cggcgcgttc ttcaccaacg ccttccagga
     2821 tcacgcggtg acggagacgg cgcccgggca ttcggtgacg atgtccgggc gcttcccacg
     2881 ttccacgggc atcctccgca acaccgccgg cgtggaggac ccgcaggccc cgctgctcac
     2941 gtcgcgcgat gcgcccgcgt cgccgtaccg cttccgcggc tcggtactct tcgactggat
     3001 ccgcaccaga gacgccagcg cccgcgccct ttccatctcg cgcaaggatc gcggcgccat
     3061 ccttcccctc ggccgggcga agcagagcgt gttctggtac gcgaccacga acggcgagtt
     3121 caccacgagc cgctattacg ccgacacgct gcccgagtgg atccggcgcg tgaacgcgcg
     3181 ccgagtgccg cagcgacgag ccggccagtc atggagcctt ctgctccctg acgggtcgta
     3241 tcgcgagccc gatgacgtcg cggtggagaa caacggccgg aacgtcagct ttccgcacgc
     3301 gctgccggcg gacaccgtgg cggcggcggg acagttgccg tacacgccct ggatggacca
     3361 gttcaccatc gacgccgcgc tcgagggaat ggaagcgctc cagctcggcc gcgggccgca
     3421 gacggacctg ctcgccgtct cgctgtccgc gacggactac atcggacatc gctacggccc
     3481 cgattcgcgc gagcagcacg acaacgtact tcggctcgat cgcgcgctcg gcgtcttcat
     3541 cgactcgctg tacaagcttc gcgactcgag caccatcgtg ttcgccctca cggcggacca
     3601 cggcgtgacc tcctttcccg agctcgttgc gcagcgggcc ggccgccccg cgccgccgcg
     3661 gtacgatctg ctgcccgccg tcgccggcct caagtccgcg ctgcgccagg ctcgcgtcga
     3721 caccaacgcc gtgagcctcg acggtccgct cgtgtcggtg gatcgcaccg cattcgccga
     3781 agcgggcgtg gatgccggat ccatcctcgg tcgcttcctc gacgtcgtgc gcgccacgcc
     3841 ggccatcgtg cgggtcgatc gcgtgcgcga cctggcgtcg cgcgacacgg tccgtgacgc
     3901 cgtggcgcgc cggtgggtgc acatgatccc accggattcg ccggtggagt acgtcatcac
     3961 gccgcgcgag ggcgcctatc cggccgcggc cacgatcgcc gagcatggcg c
//
LOCUS       DASSYW010000886         2160 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_4589, whole genome shotgun sequence.
ACCESSION   DASSYW010000886 DASSYW010000000
VERSION     DASSYW010000886.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2160)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2160)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2160
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4589"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(212..1081)
                     /locus_tag="VFN38_14085"
     CDS             complement(212..1081)
                     /locus_tag="VFN38_14085"
                     /EC_number="1.14.19.-"
                     /inference="COORDINATES: protein motif:HMM:NF012699.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid desaturase"
                     /protein_id="HET9012950.1"
                     /translation="MDATEMAKHQPWKQPWWRPTKGDELFFVWIVLIHAGAVAGLILT
                     PVPGWPVFFVAAALHFLGGLGTTVCYHRAITHKSLKLHPVVRNVLTFFALMNGSGSPL
                     SWAAYHRLHHAKSDTPEDISSPRVGGFWWSHLRWLWQAGSAPIAKYCKDIDTPAYRMW
                     TRIQLPLVVLAFFGGLPFGLAAFFWVGPIRLTLALHAQCFVNSVCHMRPDAGPDEATA
                     KNVRWLSLMHFFQGENWHQNHHDRPGSARLGWTPLQLDIGWYTILLLEKLGLATNVRR
                     PSQVDTGSLDAAA"
     gene            complement(1114..>2160)
                     /gene="bioB"
                     /locus_tag="VFN38_14090"
     CDS             complement(1114..>2160)
                     /gene="bioB"
                     /locus_tag="VFN38_14090"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR00433.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004076 - biotin synthase activity
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase BioB"
                     /protein_id="HET9012951.1"
                     /translation="PAPGKLTRRPRPRPRPSARDQPRIVLKEAPLSRHEYTLAEVRSI
                     HDLPIPDLVLRAQLIHREHHPANDVQLCSLLSVKTGGCPEDCAYCPQSSHYDTGLERE
                     RMMKPPEVLDAAARAKAAGATRFCMGAAWREVKDGPAFDEVLEMVRGVRALGMEACCT
                     LGMLSEPQAQRLAEAGLSAYNHNLDTSRSYYKSIISTRGYDDRLRTLANVRKAGITVC
                     SGGIIGMGESPDDRCGMLATLANLDPQPESVPINALVPVEGTPLADRPPVDGLELVRM
                     IATARILMPAARVRLSAGRMALSREAQVLCFLAGANSIFYGEKLLTTGNPDVSADQSL
                     LRDAGLRAASSGDA"
BASE COUNT          340 a          759 c          747 g          314 t
ORIGIN      
        1 tcggccgcga gagcgtcggc ctcgacgggc agatcctcga acgccacgcc gatcgcaccg
       61 tcgcgatccc gatgctcgat cgcgagctgc gctcgctgaa cctgtcgacc tcggtcgcgc
      121 tcgcgctcta cgaagtccgc cgacagtggg gctggagctg acggttcggc gtcgcgccac
      181 gtcgaccact cacgcggcca gacgaaccga gctaggccgc ggcgtcgagc gagccggtgt
      241 cgacctgcga ggggcggcgc acgttcgtag ccagccccag cttctcgagc agcaggatcg
      301 tgtaccagcc gatgtccagc tgcagcggcg tccagccgag gcgcgccgag ccggggcggt
      361 cgtggtggtt ctggtgccag ttctcgccct ggaaaaaatg catgagcgac agccagcgca
      421 cgttcttcgc ggtcgcctcg tcggggccgg catcgggccg catgtggcaa acgctgttga
      481 cgaagcactg cgcgtgcagc gcgagcgtca ggcggatcgg ccccacccag aagaacgccg
      541 ccaggccgaa cggcaagccg ccgaagaaag ccagcacgac cagcggcagc tggatgcgcg
      601 tccacatccg ataagcgggc gtgtcgatgt ccttgcagta cttcgcgatc ggcgccgacc
      661 ccgcctgcca cagccagcgc aggtgcgacc accagaagcc gcccacgcgc gggctgctga
      721 tgtcctcggg cgtgtccgac ttcgcgtggt gcaggcggtg gtacgcggcc cacgacagcg
      781 gcgatcccga tccgttcatc agcgcgaaga aggtcagcac gttgcgcacc accgggtgca
      841 gcttcagcga cttgtgcgtg atcgcgcggt ggtagcagac cgtcgtgccc aggccgccca
      901 ggaagtgcag cgcggccgcg acaaagaaca ccggccagcc cggcaccggc gtgaggatca
      961 ggcccgcgac agcgccggcg tggatcagca cgatccagac gaagaagagc tcgtcgccct
     1021 tcgtcggccg ccaccagggc tgcttccacg gctggtgctt ggccatttcg gtggcgtcca
     1081 ttgcgggcag ccgctgggcg cgcgcgtcgc tactcacgca tcacccgaac tggccgcgcg
     1141 cagcccggcg tcgcgcaaca gcgactgatc cgccgagacg tccgggttgc ccgtggtgag
     1201 cagcttctcg ccgtagaaga tcgagtttgc gcccgccagg aagcagagca cctgggcctc
     1261 gcgcgacagc gccatgcggc ccgccgacag gcgcacgcgc gccgccggca tcaggatgcg
     1321 cgcggtcgcg atcatgcgca ccagctccag gccgtcgacg ggcggccgat cggcgagcgg
     1381 cgttccctcg acggggacca gcgcgttgat cggcacgctc tccggctgcg ggtccaggtt
     1441 ggccaacgtc gccagcatcc cgcagcggtc gtccggcgat tcgcccatgc cgatgattcc
     1501 acccgaacat accgtgatgc cggccttgcg gacgttcgcc agcgtgcgca gccgatcgtc
     1561 gtagccgcgc gtcgagatga tcgacttgta atacgagcgc gaggtgtcga ggttgtggtt
     1621 gtaggcggac aggccggcct cggccaggcg ctgcgcctgc ggctcgctca gcatgcccag
     1681 cgtgcagcac gcctccatcc ccagcgcgcg cacgccgcgc accatctcca gcacctcgtc
     1741 gaaggccggg ccgtccttga cctcgcgcca ggctgcgccc atgcagaagc gggtggcgcc
     1801 ggccgctttc gcgcgcgccg ccgcgtccag cacctcgggc ggcttcatca tgcgctcgcg
     1861 ctccagcccg gtgtcgtagt gcgacgactg cgggcaatag gcgcagtcct cggggcagcc
     1921 gcccgtcttc accgacagca gcgagcagag ctgcacgtcg ttggccgggt ggtgctcgcg
     1981 atgaatgagc tgtgcgcgca ggaccaggtc cggaatcggc agatcgtgaa tcgaccggac
     2041 ctctgccagc gtgtattcgt gccgcgacaa gggggcctct tttagcacaa tccgaggctg
     2101 atcgcgcgcg cttggccggg gccgtgggcg gggccgacga gtcagtttac ccggcgcagg
//
LOCUS       DASSYW010000887         3382 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1668315, whole genome shotgun sequence.
ACCESSION   DASSYW010000887 DASSYW010000000
VERSION     DASSYW010000887.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3382)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3382)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3382
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1668315"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..348)
                     /locus_tag="VFN38_14095"
     CDS             complement(<1..348)
                     /locus_tag="VFN38_14095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012952.1"
                     /translation="MSGYRIVFMQAASGSAAQAPQAAPSPRVERTVPTREQIREQIRQ
                     SIQEATRAAGQAGATVTIDGRPVIVGTPLPPDLPGVTIQHSGMEDVIPQRAVDIAYGF
                     FFMFAVIIIGWPLA"
     gene            complement(427..1290)
                     /locus_tag="VFN38_14100"
     CDS             complement(427..1290)
                     /locus_tag="VFN38_14100"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: protein motif:HMM:NF013222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003908 -
                     methylated-DNA-[protein]-cysteine S-methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HET9012953.1"
                     /translation="MSTMMTPRPASESHVALAERVRRYIDDHADEPLPLDRLAREAGV
                     SPAHLQRTFSRIVGLSPKRYQEQRRVGTLKHALRAGRTVSSATYEAGFASGRRVYETA
                     AEALGMTPGAYRRRGTGVTIHYAAVPTSLGLLLVAVTERGVCSVSLGDDEATLVEALR
                     REFPAAELARASDARDRLVDAVVAHVEGRAEPGELPLDVRATAFQWQVWRALQRIPEG
                     ATRSYQGVAEELGRPTAARAVARACASNRVAVLIPCHRVVRGDGGLGGYRWGIARKAA
                     LLAREGARPGV"
     gene            complement(1432..2823)
                     /locus_tag="VFN38_14105"
     CDS             complement(1432..2823)
                     /locus_tag="VFN38_14105"
                     /inference="COORDINATES: protein motif:HMM:NF014307.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)(+) transhydrogenase (Re/Si-specific)
                     subunit beta"
                     /protein_id="HET9012954.1"
                     /translation="MRETITQLTYLAASVLFIVGLRSLTRPDKARRGMQQAAVGMLLA
                     LCGTLMNHQIVDYRWIAGGLVLGALIGYPLGMWVPTTALPQRIAFSLSFGALAATLVG
                     VAEYYSTFHGGEGHIGAAKMAALGFEVLLGALTVTGALIAAGKLQEWIPSQPMTYRGQ
                     NLVNFVLFATALVLFGMVVVNPANSVAFYAMIGLAALLGVLMVMPIGGADMPVVVALL
                     NSYCGLAAAATGFALGNSILIICGALDGASGFLLSILMSKAMNRSFANVLFGAFGGET
                     AAATVGGGSALPVRSVSAEDAAIQLAYAQRVIIVPGYGMAVAQAQHAVRELAELIEKR
                     GGEVKYAIHPVAGRMPGHMNVLLAEANVPYDKLYDMDEINSEFPQTDVALVIGANDVV
                     NPAAREDKASPIYGMPILDVDKAKSVIVLKRGMAAGFAGIENALFHASATSMLFGDAK
                     SSLTKLVSEVKNA"
     gene            complement(2827..3132)
                     /locus_tag="VFN38_14110"
     CDS             complement(2827..3132)
                     /locus_tag="VFN38_14110"
                     /inference="COORDINATES: protein motif:HMM:NF024179.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P) transhydrogenase subunit alpha"
                     /protein_id="HET9012955.1"
                     /translation="MLILELYVFVLAGFVGFMVITRVPPLLHTPLMSATNAISGISLV
                     GSMVAAGANRGAVATALGFVAVVCATTNVVGGFLITDRMLKMFRREPHADAAKTEKK"
     gene            complement(3137..>3382)
                     /locus_tag="VFN38_14115"
     CDS             complement(3137..>3382)
                     /locus_tag="VFN38_14115"
                     /inference="COORDINATES: protein motif:HMM:NF013430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012956.1"
                     /translation="GGNCELTIAGETVRSGNVTILGPVDLPATVPYHASQMFGKNVLA
                     LVTHLTHEGALHLDRNDEITSAMTVVRDGQVVTPPPK"
BASE COUNT          489 a         1218 c         1203 g          472 t
ORIGIN      
        1 ggccagcggc cagccgatga tgatcaccgc gaacatgaag aagaagccgt acgcgatgtc
       61 cacggcccgc tgcgggatca cgtcctccat gccggagtgc tggatcgtca cgccgggcag
      121 gtcggggggc agcggggtgc cgacgatgac ggggcggccg tcgatggtga cggtggcccc
      181 ggcctggccg gccgcccgcg tcgcctcctg gatcgactgg cggatctgct cgcggatctg
      241 ctcgcgcgtc gggacggtgc gctccacccg gggcgacggg gcggcctggg gcgcctgggc
      301 cgcgctcccg gacgctgcct gcatgaagac gatgcgatag ccggacatcg gagtgcctcg
      361 tgaggtcgtt ggcgccgacg acctcgtcgg cgcctcaccc aacttacgac gtcgcggccc
      421 gcgaagttac acccccggcc gggctccttc ccgggccagc agcgccgcct tgcgggcgat
      481 tccccagcga tagcccccca gcccgccgtc gccgcggacg acgcggtggc aggggatgag
      541 cacggcgacg cggttgctgg cgcaggcgcg tgcgacggcc cgtgccgccg tcggccgccc
      601 cagctcctcg gccaccccct ggtagctgcg cgtggcgccc tccgggatcc gctggagcgc
      661 ccgccacacc tgccactgga acgccgtcgc gcgcacgtcc agcggcagct cgcccggctc
      721 ggcacgtccc tccacgtgcg ccaccaccgc gtccaccagc cgatcgcgcg catcgctggc
      781 ccgcgccagc tcggcggcgg ggaactcgcg gcgcagcgcc tccaccagcg tggcctcgtc
      841 gtcgcccagc gacacgctgc agaccccgcg ctcggtgacc gccacgagga gcagcccgag
      901 cgacgtgggg accgccgcgt agtggatggt cacccccgtg ccgcggcggc ggtacgcgcc
      961 cggggtcatg cccagcgcct cggcggccgt ctcgtagacg cggcggccgg acgcgaaccc
     1021 cgcctcgtac gtggcgctgc tcaccgtgcg cccggcccgc agcgcgtgct tcagcgtgcc
     1081 gacgcggcgc tgctcctggt accgcttcgg cgagaggccg acgatgcggc tgaaggtgcg
     1141 ctggagatgc gccgggctca cccccgcttc gcgcgccagc cggtcgagcg ggagcggctc
     1201 gtcggcatgg tcgtcgatgt agcggcgtac gcgctcggcg agcgcgacgt gggattccga
     1261 agcggggcgg ggggtcatca tcgtggacat ggggctcctc ctgggtgatg gaggaagttt
     1321 ggcgaggcgc ccacggccca agctatccga ttgttgctcg gcgaagcgat agcccggtcg
     1381 gacggcccga gcggccggac agaccgggtc gcccgatcga ccggcccctc gtcacgcgtt
     1441 cttcacttcc gacaccagct tcgtgagcga cgacttcgcg tcgccgaaca gcatgctcgt
     1501 ggccgaggcg tggaacagcg cgttctcgat gccggcgaag ccggcggcca tgccgcgctt
     1561 cagcacgatc acgctcttcg ccttgtccac gtcgaggatc ggcatgccgt agatcggcga
     1621 cgccttgtcc tcgcgcgccg ccgggttcac cacgtcgttc gcgccgatca ccagcgccac
     1681 gtcggtctgc gggaactcgc tgttgatctc gtccatgtcg tacagcttgt cgtagggcac
     1741 gttcgcctcg gcgagcagca cgttcatgtg gccgggcatg cgccccgcca ccgggtggat
     1801 ggcatacttc acctcgcccc cgcgcttctc gatcagctcc gcgagctcgc gcaccgcgtg
     1861 ctgcgcctgc gccaccgcca tgccgtagcc gggcacgatg atcacccgct gggcgtaggc
     1921 gagctggatc gccgcgtcct cggccgacac cgaccgcacc ggcagcgccg atccgccgcc
     1981 caccgtggcg gccgcggtct cgccgccgaa ggcgccgaac agcacgttgg cgaacgagcg
     2041 gttcatcgcc ttcgacatca ggatcgacag caggaacccc gacgcgccgt cgagcgcgcc
     2101 gcagatgatg aggatgctgt tgcccagcgc gaagccggtg gcggccgccg ccagcccgca
     2161 gtacgagttg agcagcgcga ccacgaccgg catgtcggcc ccgccgatcg gcatcaccat
     2221 cagcacgccg aggagcgcgg cgagcccgat catcgcgtag aaggccacgc tgttcgccgg
     2281 gttcacgacc accatgccga acagcacgag cgccgtggcg aacagcacga agttgacgag
     2341 gttctgcccc cggtacgtca tcggctgcga cgggatccac tcctgcagct tgcccgcggc
     2401 gatcagcgcg ccggtgacgg tgagggcgcc gagcagcacc tcgaacccga gcgcggccat
     2461 cttcgccgcg ccgatgtggc cctcgccgcc gtggaaggtg gagtagtact ccgccacccc
     2521 caccagcgtc gcggcgagcg cgccgaagct cagggagaag gcgatccgct ggggcagcgc
     2581 cgtcgtcggc acccacatgc cgaggggata cccgatgagg gcgccgagca cgaggccccc
     2641 ggcgatccac cggtagtcga cgatctggtg gttcatcagc gtgccgcaca gcgccagcag
     2701 catcccgacg gcggcctgct gcatgccgcg gcgtgccttg tcggggcgcg tgaggctgcg
     2761 cagccccacg atgaacagga ccgacgccgc gaggtaggtg agctgcgtga tggtctcgcg
     2821 catccgctac ttcttctccg tcttggcggc gtcggcgtgc ggctcgcggc ggaacatctt
     2881 cagcatgcgg tcggtgatga ggaagccgcc cacgacgttc gtcgtcgcgc acaccacggc
     2941 gacgaagccg agcgccgtcg ccacggcgcc gcggttggcg cccgcggcga ccatggagcc
     3001 gacgagcgag atgccggaga tcgcgttggt ggccgacatg aggggcgtgt gcagcagggg
     3061 cggcacccgc gtgatcacca tgaagccgac gaagccggcg aggacgaaga cgtacagctc
     3121 gaggatcagc atcgcatcac ttggggggag gcgtgacgac ctggccgtcg cggacgacgg
     3181 tcatcgccga ggtgatctcg tcgttccggt cgaggtgcag cgcgccctcg tgggtgaggt
     3241 gcgtgacgag ggcgaggacg ttcttgccga acatctggct ggcgtggtac gggacggtgg
     3301 ccggcaggtc gaccggcccc aaaatggtca cgttgcccga ccggaccgtc tcgccggcga
     3361 tcgtgagctc gcagttgccg cc
//
LOCUS       DASSYW010000888         2519 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_986982, whole genome shotgun sequence.
ACCESSION   DASSYW010000888 DASSYW010000000
VERSION     DASSYW010000888.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2519)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2519)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2519
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_986982"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..251)
                     /locus_tag="VFN38_14120"
     CDS             complement(<1..251)
                     /locus_tag="VFN38_14120"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HET9012957.1"
                     /translation="MSGDNTPSQGPLAGLTVLDLTLALAGPFATFLLAGLGARVIKIE
                     NPESPDPCRQNPPYLGRDGVSLGRTHADDVSVSALNRLRG"
     gene            complement(289..1218)
                     /locus_tag="VFN38_14125"
     CDS             complement(289..1218)
                     /locus_tag="VFN38_14125"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HET9012958.1"
                     /translation="MELRHLRYFVAVAEELNFTRAATRLNTSQPSLSQQIRQLEVEVG
                     VALLDRSRHHVALTGAGRAFLRETKDILGRVEHAGRLAKQAAGGRAGDLSVGTFPAAD
                     VRILPPLRPLVATHLPHLRLLLHSKYAVEPVTGLRTGALDVAFMRGPLDVEGLEVIDL
                     VREEIVVVLPAHHALARRKRIPVHLLHDLPCITMDRALAPALHDVIASLYQQARIRMQ
                     AVSSADNVLGHLQLVQEGFGFALLPDSVGALLPPGVVLKPLAHDPVPTVSIVIAWKAG
                     NPSPLVRTFVDLVQQSVPNGKDVTRLTGRLRKS"
     gene            1421..2470
                     /locus_tag="VFN38_14130"
     CDS             1421..2470
                     /locus_tag="VFN38_14130"
                     /inference="COORDINATES: protein motif:HMM:NF015297.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase/citrate lyase family protein"
                     /protein_id="HET9012959.1"
                     /translation="MKYLHVAVAACIAVSLAMVLQAEQGGARTGGAAPGTTNAPLIGG
                     TLTPAKPDARGWGWQVKALINPATPRPFYNKAKELLFQDKQITSYTISTYNAEFYCEV
                     AKHYDYIWFEMQHSTMSYDEVRRMILACPGAGAAPMIRMPDALESSIQKATDLGAIGI
                     IVPTVDDALEARDAARFSRYPPFGRRSSGGGSFGQVWPGVNYRATVNDNMLVTVMIET
                     LEGVANAEEIAATHGVDVLLMGNNDLSSFSGWGQNDPRYQDALVKVHDAALKYGKYFG
                     NAGAQYLNGYVLSADTRMVQNGPARDGWTPPARGGGPGRGTAPAGRGRGDGAPEPDAE
                     PVIGLPGGVPPGGRK"
BASE COUNT          467 a          790 c          878 g          384 t
ORIGIN      
        1 ccacgaagcc tgttcagcgc cgataccgag acatcgtctg cgtgcgtgcg gccgagcgac
       61 acgccatcgc gcccaaggta agggggattc tgccggcacg gatcgggcga ctcggggttc
      121 tcgatcttga tgacgcgtgc accgaggccg gccaggagga acgtggcgaa cggcccggcg
      181 agcgcgagcg tgagatcgag cacagtgagg ccggccagcg ggccctgcga aggcgtgttg
      241 tcgccggaca tcttgcggtc gaagtgtagc gatccggtgt cggagcgact aagactttct
      301 aagccggccc gtgagacgtg tgacgtcttt cccgttcggc actgactgct ggacgagatc
      361 gacgaaggtg cgcacgagcg gcgaggggtt gccggccttc cacgcgatga caatcgacac
      421 cgtcgggacg gggtcgtggg cgagtggctt gaggacgacg ccagggggca gcagcgcgcc
      481 gaccgaatcg ggaagcagcg cgaatccaaa cccctcctgc accagttgga ggtggccgag
      541 cacattgtcg gcgctcgaga cggcctgcat ccggatacgc gcctgctggt agagggaggc
      601 gatcacatcg tgcagcgcgg gcgcaagcgc ccgatccatc gtgatgcacg gcagatcgtg
      661 cagcaggtgc accgggatgc gtttgcgtct ggccaaggca tggtgcgccg gcaggacgac
      721 gacgatctcc tcgcgcacga gatcgatgac ctcgagtccc tcgacgtcca gcggcccgcg
      781 catgaacgcc acgtcaagcg cccccgttcg gagtcccgtg accggttcga cggcgtactt
      841 gctgtgcagg aggaggcgaa ggtgaggcag gtgcgtggca acgagcgggc gcaatggcgg
      901 aaggattcgg acgtcggctg ccggaaaggt tcctaccgac agatcgccgg cgcgccctcc
      961 ggcggcttgt ttcgcgagtc ggcccgcatg ctcaacgcga ccgaggatgt ctttcgtctc
     1021 acgcaggaag gcgcggccgg cgcccgtcag cgcgacgtga tgacggctcc gatcgagcag
     1081 cgcgacgcca acctccacct cgagttggcg gatctgctgg ctgagcgacg gttgcgacgt
     1141 gttcagtcgg gtcgcggcgc gcgtgaaatt cagttcttcc gccaccgcca cgaagtaccg
     1201 cagatgccgc agctccaccc ataaaggcta gacggcgcgg cgaagaatcg caacctggaa
     1261 gcgctcgcgg tgagtcgtgg aatgtcttac tacggcggtc cccgggcggg agatccggtc
     1321 gaagcggagt ggtattcttg cgcgtcgctc gcgagctggc cgcttcggcg cgtcacgctg
     1381 cgccgatacc gcaaccatcc accacggaag ggagtgtgaa atgaaatacc tgcatgttgc
     1441 cgtagcggcc tgcatcgccg tgagcctcgc catggtgctt caggccgagc agggtggcgc
     1501 acgaacgggc ggggccgcgc cgggcacaac caacgcccct ctgattggcg gaacgctcac
     1561 gcctgcaaaa cccgatgcgc gcggctgggg ctggcaggtg aaggcgttga tcaacccggc
     1621 gacgccgcgg ccgttctaca acaaggccaa ggaactgctg ttccaggaca agcagatcac
     1681 gagttacacg atctcgacgt acaacgccga gttctactgc gaggtcgcca agcactacga
     1741 ctacatctgg ttcgagatgc agcacagcac gatgtcgtac gacgaagtgc gccggatgat
     1801 cctggcgtgt cccggcgccg gtgctgcgcc gatgatccgc atgcccgacg cgctcgaatc
     1861 gagcatccag aaagcgaccg acctcggtgc aatcggcatc atcgtgccga cggtggacga
     1921 tgcgctcgaa gcccgcgatg cggcgcggtt ctcgcgatat ccgccgtttg gtcgccgcag
     1981 ctcgggcggc gggtcattcg gccaggtctg gcccggggtc aactaccgcg ccaccgtcaa
     2041 cgacaacatg ctcgtcaccg tcatgatcga aacactcgag ggcgtggcga acgcggaaga
     2101 aatcgccgcc acgcacggcg tcgacgtcct gctgatgggc aataacgatc tctcgagctt
     2161 ctcagggtgg gggcagaacg atccgcgcta ccaggacgcg ctcgtcaagg tgcacgacgc
     2221 cgcgctcaag tacgggaagt acttcggcaa cgccggcgcc cagtatttga acggctacgt
     2281 cctgagtgcg gacacgcgca tggtccagaa cggaccggcg cgtgatggat ggacaccgcc
     2341 ggcccgcggt ggcggccccg ggcgcggcac ggcgccagca ggacgcggtc gcggcgacgg
     2401 tgcgcccgag cccgatgcag agccggtcat cggacttcca ggcggcgtgc cgccaggcgg
     2461 acgcaagtag aagagttcgg acgggagagc acttccgctg gcgtttggaa atcgcggcg
//
LOCUS       DASSYW010000889         2136 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_579442, whole genome shotgun sequence.
ACCESSION   DASSYW010000889 DASSYW010000000
VERSION     DASSYW010000889.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2136)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2136)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2136
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_579442"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..222)
                     /locus_tag="VFN38_14135"
     CDS             complement(<1..222)
                     /locus_tag="VFN38_14135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012960.1"
                     /translation="MPSKKPHPSELEPIERASRSELQALQLERLRWSLNHAYANVPHY
                     RARFDEAGIKPSDLKTLADLAKFPFTLKKD"
     gene            complement(237..698)
                     /gene="paaI"
                     /locus_tag="VFN38_14140"
     CDS             complement(237..698)
                     /gene="paaI"
                     /locus_tag="VFN38_14140"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR02286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010124 - phenylacetate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyphenylacetyl-CoA thioesterase PaaI"
                     /protein_id="HET9012961.1"
                     /translation="MPERPHAPTHGMDPHAIAEAVRHGMFKDDAASQGLGMQIEAVGP
                     GYARIAMTVRPDMLNGFRICHGGFITTLADSAFAFGCNSYNEMTVASGIVVDFLAPAH
                     EGDRLVAECHEVSRSGRTGVYDIKVTNQHAKTVVVMRGRSHTIKGKPVVNL"
     gene            complement(707..>2136)
                     /locus_tag="VFN38_14145"
     CDS             complement(707..>2136)
                     /locus_tag="VFN38_14145"
                     /EC_number="1.1.1.35"
                     /inference="COORDINATES: protein motif:HMM:NF006124.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase"
                     /protein_id="HET9012962.1"
                     /translation="AQPGAVERAIANAASSLKALADKGKVPAEHAVAIPARMRPASLA
                     DLAECGLVIEAIVEDMEVKRDLFRAVEDIVGPRCILATNTSSLSVTAMAAGLKRPERV
                     VGMHFFNPPTRMRLVEVISGLETAPDVARIVHGTSEAWGKHAAYAKSTPGFIVNRIAR
                     PFYGEAWRAYTEGAADPATIDAVVRDCGGFPMGPFELMDLIGHDVNFAVTKSVFDATF
                     GERRYAPSLAQQELVRAGRLGRKTGRGIYDYRDGAARLAPTLELGAEPVKRVVAVGSL
                     GIATPIITRLERAGVDVVRVQGPREAQIPSSGWLEIGPAHLMMTDGRPATRRAMEDAH
                     EHLVLFDLALDYSKTPRLGLARADQCGPAAFRTVCATLGAAGFECSPLDDVAGLVVLR
                     LIAMLVNEAADAVAHGICSADAIDVAMRYGVNYPRGPMEWSEQVGLHVFARALANLRD
                     HYGEERYRTSALITRKGYTGAGFHG"
BASE COUNT          310 a          736 c          745 g          345 t
ORIGIN      
        1 gtccttcttc agcgtgaacg ggaacttcgc caggtccgcc agcgtcttca ggtcggacgg
       61 cttgatgccg gcctcgtcga acctggcgcg gtagtgcggc acgttcgcgt acgcgtggtt
      121 cagagaccag cgcaggcgct cgagctgcag cgcctgcagc tcggaccggc tggcacgctc
      181 gatcggctcg agttcggacg ggtgcggctt cttcgacggc atcgcgttgc ttccgttcag
      241 aggttcacga ccggcttgcc cttgatcgtg tgcgatcggc cgcgcatcac gaccacggtc
      301 ttggcgtgct ggttggtgac cttgatgtcg tacacgcccg tgcgccccga gcgcgagacc
      361 tcgtggcact ccgcgacgag gcggtcgcct tcgtgggccg gcgcgaggaa gtcgacgacg
      421 atgccggagg ccacggtcat ctcgttgtaa ctgttgcagc cgaacgcgaa cgccgagtcg
      481 gcgagcgtcg tgatgaagcc gccgtggcag atcctgaagc cgttcagcat gtccggccgc
      541 acggtcatcg cgatgcgcgc atagcccggt ccgacggcct cgatctgcat cccgagaccc
      601 tgcgatgcgg catcgtcctt gaacatgccg tggcgcacgg cctccgcgat cgcgtgcggg
      661 tccatgccgt gcgtcggcgc gtgcggacgt tcaggcatct tggcgctcat ccatgaaagc
      721 cggctccggt gtagcccttg cgcgtgatca gcgccgacgt gcgatagcgc tcctcaccgt
      781 agtgatcgcg caggttggcg agcgcgcgcg cgaacacgtg caggcccacc tgctcggacc
      841 actccatcgg tccgcgcggg tagttgacgc cgtagcgcat cgcgacgtcg atcgcgtccg
      901 cgctgcagat gccgtgcgcc accgcgtcgg cggcctcgtt cacgagcatc gcgatcaggc
      961 ggagcacgac cagcccggcc acgtcgtcga ggggcgaaca ctcgaaaccg gcggcgccga
     1021 gcgtcgcgca cacggtgcgg aacgcggccg ggccgcactg gtccgcgcgc gccaggccga
     1081 ggcgcggcgt cttcgagtag tcgagcgcga ggtcgaacag cacgaggtgc tcgtgtgcgt
     1141 cttccatggc gcggcgcgtc gccggccggc cgtcggtcat catcagatgc gccggtccga
     1201 tctcgagcca gccggacgac gggatctgcg cttcgcgcgg tccctgcacg cgcaccacgt
     1261 cgacgccagc ccgctcgagc cgcgtgatga tcggcgtggc gatgccgagc gagccgacgg
     1321 cgacgacgcg cttgaccggc tcggcaccga gttcgagggt cggcgccagt ctggccgcgc
     1381 catcgcggta gtcgtagatg ccgcgaccgg tcttgcgccc gaggcgaccg gcgcgcacca
     1441 gttcctgctg cgccagggac ggcgcgtagc ggcgctcgcc gaaggtggcg tcgaacaccg
     1501 acttcgtgac ggcgaagttc acgtcgtgcc cgatcaggtc catcagttcg aaggggccca
     1561 tcgggaagcc gccgcagtcg cgcaccacgg cgtcgatcgt cgccgggtcg gcggcgcctt
     1621 cggtgtaggc acgccacgcc tcgccgtaga agggccgcgc gatccggttg acgatgaagc
     1681 cgggcgtcga cttcgcatac gccgcgtgct tgccccaggc ctccgaggtc ccgtggacga
     1741 tgcgcgccac gtcgggcgcg gtctccagtc cactgatgac ctcgaccagt cgcatccgcg
     1801 tgggcgggtt gaagaaatgc attccgacca cgcgctcggg ccgcttcagc ccggctgcca
     1861 tcgcggtgac cgacagcgac gacgtgttgg tggcgaggat gcagcgtgga ccgacgatgt
     1921 cttcgaccgc gcggaacagg tcgcgcttga cctccatgtc ctcgacgatg gcttcgatca
     1981 cgaggccgca ctcggcaagg tcggccagcg acgccggacg catgcgggct ggaatcgcca
     2041 cggcgtgttc cgccggcacc ttgcccttgt ccgcgagcgc cttcaacgaa ctggcggcat
     2101 tggcgatcgc acgctcgacg gcacccggct gcgcat
//
LOCUS       DASSYW010000890         2196 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1036304, whole genome shotgun sequence.
ACCESSION   DASSYW010000890 DASSYW010000000
VERSION     DASSYW010000890.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2196)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2196)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2196
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1036304"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..439)
                     /locus_tag="VFN38_14150"
     CDS             complement(<1..439)
                     /locus_tag="VFN38_14150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012963.1"
                     /translation="MPQALRLCRAAASALLLLAPSLDAQSRAGVTAAEIDAHLRFLSS
                     DLLEGRAPGTRGGRLAAEYIATQLRAFGVEPGVNGSYFQPVPIDVLTTQPASVHAIAS
                     GKATATLKPGEDVVLSAGSATPQATARGEVVFVGYGAVAPEYRW"
     gene            578..946
                     /locus_tag="VFN38_14155"
     CDS             578..946
                     /locus_tag="VFN38_14155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012964.1"
                     /translation="MHARSRFALHTALAGLVLCLSARSASAQQSLAPRTPPADVAAPA
                     RAAGPTVDAARAGVSHQSSPELRTAAAPRRAGYGQPVALMVVGGAALLTGLIIGGSAG
                     TVIAVGGALVGLYGLFEYLQ"
     gene            1119..>2196
                     /locus_tag="VFN38_14160"
     CDS             1119..>2196
                     /locus_tag="VFN38_14160"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HET9012965.1"
                     /translation="MGRRIALVLGGGGLKGFAHIGVLRALAERGIVPDVYAGTSIGAL
                     IAGAYLAGATIDELQTRAEALRKRQLFRLNHFGMLLERMRSPSIYLEEPLRALVAGAI
                     PDVTFSALPKRLLVNTVDLNRGARVVWGLPGLEDVPVRDAVYASCALPGFFPPGHVGE
                     RTCIDGGVVDNLPVSVASQFGDIVIAVDVGSSDQSRRDAASAGFAGIYMRAATMMMHA
                     LQQFPLERWHGPPMVLIRPRVDDANWLSFTDTAANIAEGYRSATRALERFESYWDHPN
                     CVYPRRRVQIDVNRELCTGCGTCVSLAPALMGMDGTGKAFARTHIVEWSPAEGGFVHE
                     CPTSAISATNIDRRSTSIDVHTLHD"
BASE COUNT          303 a          795 c          774 g          324 t
ORIGIN      
        1 cccatcggta ttcgggcgcc acggcgccgt agccgacgaa cacgacctcg ccgcgtgccg
       61 tcgcctgcgg cgtcgcgctg ccggcggaca gcacgacgtc ctcgcccggc ttcagcgtcg
      121 ccgtcgcttt tccggacgcg atcgcgtgca cggatgccgg ctgggtcgtg agcacgtcga
      181 tcggcaccgg ctggaagtac gagccgttca cgccgggctc gacgccgaac gcgcggagct
      241 gcgtcgcgat gtactcggcg gcgagacggc cgccgcgggt gccgggcgcg cggccctcga
      301 gcaggtcgga gctgaggaag cggagatgcg cgtcgatctc cgccgcggtg actccggccc
      361 gcgattgtgc gtcgagagag ggagcaagaa gcagcagcgc cgacgccgcg gcgcggcaga
      421 ggcggagggc ctgaggcatg gttggcgcgg tgatggagga acggcccgaa gttcgcagcg
      481 gaagcggcgt cgaagactag accaggcacc caccgggcgc caccattgag cgcgcgccgc
      541 gatcgtccgg cgcgcccgac ccgcacaagg atccgacatg cacgcacgtt ctcgcttcgc
      601 cctccacacc gcactcgccg ggctcgtcct ctgcctctcg gcgcgatccg cgtcggcgca
      661 gcagtcgctc gcgccgcgca ctccgcccgc ggacgtcgcc gctcccgctc gcgccgccgg
      721 cccgacggtg gacgccgccc gcgccggcgt gagccaccag tcgtcgcccg agctgcgaac
      781 cgcggccgcc ccgcgtcgcg ccggctacgg ccaacccgtt gccctcatgg tggtcggcgg
      841 tgccgcgctc ctcacggggt tgatcatcgg aggcagcgcc ggaacggtga tcgccgtcgg
      901 tggggcgctc gtgggactgt acgggctgtt cgagtacctc cagtaagggt tcgatcgtct
      961 tcgggagcgg ggggcgggca tcgttccggt gcccgccccc cacgcatctg gggtagtaca
     1021 ggtctcggga cgtgctcgcc gccaggcggg cacggcattt gaccctctgc atcgacatgc
     1081 cgcgctcatc ccgctccatc gagccgccgg aggcatccgt gggaagacgc atcgcgctgg
     1141 tgctcggcgg cggtggactg aaagggttcg cgcacatcgg ggtgctgcgc gcgttggcgg
     1201 agcgcgggat cgttcccgac gtctacgccg gcaccagcat cggtgcgctg atcgccggcg
     1261 cgtacctcgc cggcgccacg atcgacgagc tccagacgcg cgccgaagcg ctgcgcaagc
     1321 ggcagctgtt ccggctcaac catttcggca tgctcctcga gcggatgcgg tcgccgtcca
     1381 tctacctcga ggagccactg cgtgcgctgg tggccggcgc gatacccgac gtcaccttct
     1441 ccgcgctccc gaagcgcctg ctcgtgaaca cggtcgacct caaccgtggc gcccgcgtgg
     1501 tgtgggggct gcccggcctg gaggacgtgc cggtgcgcga cgccgtgtac gcctcgtgcg
     1561 cgctcccggg cttcttcccg ccgggccacg tcggcgagcg cacctgcatc gacggcggcg
     1621 tggtggacaa cctgcccgtg tcggtcgcct cgcagttcgg cgacatcgtc atcgcggtgg
     1681 acgtgggcag ctcggatcag tctcgacgcg acgccgcatc agccggcttc gccggcatct
     1741 acatgcgcgc ggcgacgatg atgatgcacg cgctccagca gttcccgctc gagcgttggc
     1801 acggtccgcc gatggtgctc atccgcccgc gggtggatga cgccaactgg ctcagcttca
     1861 ccgacaccgc ggccaacatc gccgagggat atcgctccgc cacccgcgcg ctggagcgat
     1921 tcgagtcgta ctgggaccac ccgaactgcg tctatccgcg ccgacgcgtg cagatcgacg
     1981 tgaaccgcga gctctgcacc ggctgtggta cgtgcgtgtc gctcgcgccc gcactgatgg
     2041 ggatggacgg cacgggcaag gcgttcgcgc gcacgcacat cgtggaatgg tcgcccgccg
     2101 agggcggctt cgtgcacgag tgccccacga gcgcgatctc ggcgacgaac atcgaccggc
     2161 gctccacgag catcgacgtg cacaccctgc acgatc
//
LOCUS       DASSYW010000891         2563 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1501055, whole genome shotgun sequence.
ACCESSION   DASSYW010000891 DASSYW010000000
VERSION     DASSYW010000891.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2563)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2563)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2563
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1501055"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..322
                     /locus_tag="VFN38_14165"
     CDS             <1..322
                     /locus_tag="VFN38_14165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012966.1"
                     /translation="PRRRSEPRIRRVRPPDEALVEVELAIAVTATSADPVERTVREFA
                     HQARSRRLPAIEAMVQLKSLLARVYTDAASVARDLRSVRRWFVDSYYFDSNAPPSEGT
                     DQSR"
     gene            complement(310..789)
                     /locus_tag="VFN38_14170"
     CDS             complement(310..789)
                     /locus_tag="VFN38_14170"
                     /inference="COORDINATES: protein motif:HMM:NF013964.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease signature motif containing
                     protein"
                     /protein_id="HET9012967.1"
                     /translation="MTTPRKRPARRRGRGTAAPQLTSSSTSRTAYAETKRWLIAQHGP
                     VCAYCGRRVAAGSVTLDHVTPRRGQTAYDRRDNLVLACEDCNGAKADMPILAFLLRKR
                     ERAAVLLRYGAHLSPMLVDLVRGLVPANGELPRLKESFEDLLTDDDESPYHESPYRD"
     gene            1004..1975
                     /locus_tag="VFN38_14175"
     CDS             1004..1975
                     /locus_tag="VFN38_14175"
                     /inference="COORDINATES: protein motif:HMM:NF025887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4440 domain-containing protein"
                     /protein_id="HET9012968.1"
                     /translation="MRIIPVVLVTALTVTACHHGGNPPGASFAGSSLLTPLSQAEEAH
                     DALLRADLGRADSAARLGFAPGLASNFAANVIYLRGGLPIVRGRAAATAIVEAESLSA
                     GTAVRWQPVRAEVSADGRSGYSYGYTIFGAPPAGAAGPPSIRVDRYISFWRREDEGWR
                     IVAYAETYGAPPPALALPRAAAAAVVPDSPMTRARGPLEQVRAADTAFSALARRVGTG
                     RAFGDFAADNAQIFSTPGEFITGPREIRESFGPSGTSGALVWHPVAGDVAQSGDLGFT
                     VGNAVFTGRREDGGQVVRYSKYLTVWKKQRDGTWRYVVDGGSARPDQ"
     gene            2159..>2563
                     /locus_tag="VFN38_14180"
     CDS             2159..>2563
                     /locus_tag="VFN38_14180"
                     /inference="COORDINATES: protein motif:HMM:NF019095.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHRD domain-containing protein"
                     /protein_id="HET9012969.1"
                     /translation="MRVRILASTVLVLAIGGFLACSDSTAPDSTTYIATLTGANERPN
                     PVTTSASGTATYVLRGNELSYTVTVTGLSSNVTGSHIHVGASTVAGPIVVGFTADAVQ
                     NGVVTSGTLDLTKAVASGANTISGDSLRVLLEN"
BASE COUNT          349 a          924 c          928 g          362 t
ORIGIN      
        1 gccccggcgc agaagcgagc cgcgcattcg acgggttcgc ccgccggatg aggccctcgt
       61 cgaggtggag ctggccatcg cggtcaccgc gacgagcgcg gacccggtgg agcgcaccgt
      121 acgggagttc gcgcaccagg cccgctcgcg gcggctgccg gccatcgagg cgatggtgca
      181 gctcaagtcg ctgctcgccc gggtctacac cgacgcggca tcggtcgcgc gcgatctgcg
      241 ctcggtgcgg cgctggttcg tcgactccta ctacttcgac agcaacgcgc cgccctccga
      301 gggcaccgat cagtcgcggt agggcgactc gtgatagggg gactcgtcgt cgtccgtcag
      361 caggtcctcg aacgattcct tcaggcgcgg gagctcgccg ttcgcgggga ccagcccgcg
      421 cacgagatcc acgagcatgg ggctcaggtg cgcgccgtag cgcagcagca ccgccgcacg
      481 ctcccgcttc cgcagcagga aggcgaggat cggcatgtcg gccttggcgc cgttgcagtc
      541 ctcgcacgcc agcaccaggt tgtcgcgccg gtcgtacgcc gtctggccgc gacgcggcgt
      601 gacatggtcg agcgtcacgc tccccgcggc gacccgccgc ccgcagtagg cgcacaccgg
      661 cccgtgctgc gcgatgagcc accgtttggt ctccgcgtac gccgtgcggc tcgtcgagga
      721 cgaggtgagc tggggcgccg ccgtgccgcg tccccgtcgg cgagcgggtc gtttacgtgg
      781 tgtcgtcacg agctggagat gagttccctg tcggggcacc ggccggtcgc gaccgcccgg
      841 cggaccgacc ggccgcgcgc cgggtacgag agaggcaatc tacatctggc gcccggttcc
      901 cgtctcagga gtgacggagt ggcgccccgg atggttcggc agtagtctca ggcagcgggg
      961 gcgagcgccc cgccatcatc acccggcgcg acggagcgtg ggcgtgcgga tcatcccggt
     1021 tgttctcgtc acggcgctga ccgtgaccgc gtgccaccat ggtgggaacc cgccgggtgc
     1081 ctccttcgcc gggtcctcgc tgctgacgcc gctctcgcag gccgaggagg cgcacgacgc
     1141 gctcctgcgg gcggacctcg ggcgcgccga ctcggcggcg cgccttggat tcgctcccgg
     1201 tctggcgagc aacttcgcgg cgaacgtcat ctacctgcgc ggcgggctgc ccatcgtgcg
     1261 cggacgtgcg gcagcaacgg cgatcgtcga ggccgagtcg ctgagcgcgg gcaccgcggt
     1321 ccgctggcag cccgtccggg ccgaggtgag cgcggacggc cgcagcggct acagctacgg
     1381 gtacacgata ttcggcgcgc cgcccgccgg ggcagccggc cccccctcga ttcgcgtgga
     1441 ccggtacatc tcgttctggc gccgtgagga cgagggctgg cgcatcgtgg cgtatgccga
     1501 gacctacggc gccccgccgc ccgcgctggc cctgccgcgc gccgccgccg ccgcagtcgt
     1561 gcccgactcg cccatgacgc gcgcccgcgg tccgctggag caggtgcgcg cggccgacac
     1621 cgccttctcg gcgctcgcgc gccgcgtggg caccggccgc gccttcggcg acttcgccgc
     1681 cgacaacgcg cagatcttct cgaccccggg cgagttcatc accggccctc gcgagatccg
     1741 cgagtcgttc ggtccctccg gtaccagcgg agcgctcgtg tggcaccccg tcgccggcga
     1801 cgtcgcccag tccggcgacc tggggttcac cgtggggaac gccgtgttca ccggccggcg
     1861 cgaggatggg ggccaggtgg tgcggtattc caagtacctg acggtgtgga agaagcagcg
     1921 cgacggcacg tggcggtacg tggtggacgg cggaagcgcc cggccggacc agtagccgta
     1981 atgaagcgat acgccgtcgt cacggcgtga tacggcgcgc ggccgccccg gcgggcggcc
     2041 cgtgcacaca agctggtggt gcgcaacggg ttgggtgaag cgcagggtga gcggcattcc
     2101 ttgcgggtag ggcgcagcga ctccaggctc gctctcccac cgcaggacag gagaccccat
     2161 gcgcgtacgc atcctcgcct ccaccgtgct cgtcctcgcc atcggcggct ttctcgcctg
     2221 cagcgactcg accgccccgg acagcaccac gtacatcgcg accctgacag gcgccaacga
     2281 gcgaccgaat cccgtcacca cgagcgcgag cggcacggcg acgtacgtgc tcagggggaa
     2341 cgagctgtcg tacaccgtca cggtgaccgg cctgagctcc aacgtcacgg ggtcgcacat
     2401 ccatgtgggc gcgagcaccg tcgccggacc gatcgtcgtc ggcttcaccg ccgacgcggt
     2461 gcagaacggc gtcgtcacga gcgggacgct cgatctcacg aaggcggtgg cgagcggggc
     2521 gaacaccatc tcgggcgatt cgctgcgggt gctgctcgag aac
//
LOCUS       DASSYW010000892         2132 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_655316, whole genome shotgun sequence.
ACCESSION   DASSYW010000892 DASSYW010000000
VERSION     DASSYW010000892.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2132)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2132)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2132
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_655316"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            222..1340
                     /locus_tag="VFN38_14185"
     CDS             222..1340
                     /locus_tag="VFN38_14185"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HET9012970.1"
                     /translation="MAVPLLDLRAQHATIRDETVAAVMRVVDSQTFILGDAVLELERD
                     VAALSHTRHAIGCANGTDAILLAMRALDIGRGDEVITTPFTFFATAGTIHNVGATPVF
                     VDIEPKTFNIRPDAAAAARTSHTKAVIPVDLFGQMAAVEQVAAALHGLPVIEDAAQSL
                     GARRMVDGESRMAGEIPTIGTFSFFPSKNLGGFGDGGMMVTQDDAIAERLRRLRVHGG
                     AKQYVHDEVGYNSRLDALQAAVLSAKLPHLAAWSAKRRENAAYYDAAFADVAEVRTPY
                     VSPENESIFNQYTLRVADGKRDALQAFLKERGVGTSIYYPLPLHLQPCFAYLGYKQGQ
                     LPESERAAKEVLSLPIFPELTRAQLDEVVAGVRAYFAK"
     gene            1368..>2132
                     /locus_tag="VFN38_14190"
     CDS             1368..>2132
                     /locus_tag="VFN38_14190"
                     /inference="COORDINATES: protein motif:HMM:TIGR03026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003979 - UDP-glucose 6-dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide sugar dehydrogenase"
                     /protein_id="HET9012971.1"
                     /translation="MNITVVGTGYVGLVVGACLAETGNAVTCADVDAAKIEGLKQNVL
                     PIYEPGLDDYVERNQKQERLVFTTDIAAAVQKADVVFIAVGTPPDEDGSADLRHVLAV
                     AEQIGLHMRRELVIITKSTVPVGTAAKVAAAVSRHAKFPFHMCSNPEFLKEGAAIEDF
                     MRPDRVVIGVDSDHARSVMAELYAPFVRTGKPIIFMDIPSAEMTKYAANAMLATRISF
                     MNEIANLCERVGADVDNVRKGIGSDARIGSAFLFPGP"
BASE COUNT          348 a          753 c          717 g          314 t
ORIGIN      
        1 ggccacgtgc cgtactaccg caacgtcgtc gccgccctgc gcggccatgc cagtccggac
       61 accgacggcc gcgccggccg gaagtcgctg gagctgatcc tcggcatcta cgagtcggcc
      121 aagacggggc gcgaggtgcc gatccccctc cgcacgcggt tctgatcgcg gctatcattc
      181 agcagcgaat tttccaccct ttctttccag acgatcgtcc catggccgtt ccccttctcg
      241 atctccgcgc ccagcacgcc accatccgcg atgaaaccgt ggcggcggtc atgcgcgtcg
      301 tcgactcgca gaccttcatc ctcggcgatg ccgtgctgga gctggagcgg gacgtcgcgg
      361 cgctgtcgca caccaggcac gcgatcggct gcgcgaacgg caccgacgcc atcctgctcg
      421 ccatgcgggc gctggacatc ggccgcggcg acgaggtcat cacgacgccg ttcaccttct
      481 tcgccacggc gggcacgatt cacaacgtcg gggcgacgcc ggtgttcgtg gacatcgagc
      541 cgaagacctt caacatccgg ccggacgccg ccgccgcggc gcggacgagc cacacgaagg
      601 cggtcatccc cgtcgacctg ttcggccaga tggccgcggt cgagcaggtc gcggcggcgc
      661 tgcacgggtt gcccgtgatc gaggatgccg cccagtccct cggcgcgcgc cggatggtcg
      721 acggcgagtc gcgcatggcg ggcgagatcc cgacgatcgg cacgttcagc ttcttcccgt
      781 ccaagaacct cggcgggttc ggcgacggcg gcatgatggt cacgcaggac gacgcgatcg
      841 ccgagcggct gcgccggctg cgggtgcacg gcggggccaa gcagtacgtc cacgacgagg
      901 tcggctacaa cagccggctc gacgccctgc aggcggccgt gctgtcggcc aagctgccgc
      961 acctcgcggc ctggagcgcc aagcggcgcg agaacgccgc gtactacgac gccgcgttcg
     1021 ccgacgtcgc ggaggtgcgc acgccgtacg tgagccccga gaacgagtcg atcttcaacc
     1081 agtacacgct ccgggtggcc gacggcaagc gggacgcgct gcaggccttc ctcaaggagc
     1141 gcggcgtggg cacgtcgatc tactatccgc tgccgctcca cctgcagccc tgcttcgcgt
     1201 atctgggcta caagcaggga cagctgccgg agagcgagcg cgcggcgaag gaagtgctgt
     1261 cgctgcccat cttcccggag ctcacccggg cacagctcga cgaggtcgtc gcgggcgtgc
     1321 gcgcgtactt cgcgaagtga cgccaccaac ttccgacctc tgaactcgtg aacatcaccg
     1381 tcgtcggcac cggctacgtg gggctcgtcg tgggcgcctg cctcgcggag acgggcaacg
     1441 ccgtcacctg cgcggacgtg gacgccgcca agatcgaggg gctgaagcag aacgtgctcc
     1501 cgatctacga gcccgggctc gacgattacg tcgaacggaa ccagaagcag gagcgcctcg
     1561 tcttcacgac cgacatcgcc gccgccgtgc agaaggcgga cgtcgtgttc atcgccgtcg
     1621 gcacgccgcc ggacgaggac ggctcggcgg acctccgcca cgtgctcgcc gtcgcggagc
     1681 agatcggcct ccacatgcgg cgcgagctcg tcatcatcac caagtcgacg gtgccggtgg
     1741 gcacggcggc gaaggtggcc gccgcggtga gccggcacgc gaagttcccc ttccacatgt
     1801 gcagcaatcc cgagttcctc aaggaagggg cggcgatcga ggacttcatg cgccccgacc
     1861 gggtcgtgat cggggtggac agcgaccatg cacgcagcgt gatggccgag ctgtacgcgc
     1921 cgttcgtccg gacggggaag ccgatcatct tcatggacat cccgtcggcg gaaatgacga
     1981 agtacgcggc caacgcgatg ctggcgacgc gcatctcgtt catgaacgag atcgccaatc
     2041 tgtgcgagcg cgtcggcgcc gacgtggaca acgtccgcaa ggggatcggt tccgacgcgc
     2101 gcatcggctc cgccttcctg ttccccggcc cc
//
LOCUS       DASSYW010000893         2997 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_74514, whole genome shotgun sequence.
ACCESSION   DASSYW010000893 DASSYW010000000
VERSION     DASSYW010000893.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2997)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2997)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2997
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_74514"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(8..1798)
                     /locus_tag="VFN38_14195"
     CDS             complement(8..1798)
                     /locus_tag="VFN38_14195"
                     /inference="COORDINATES: protein motif:HMM:NF012935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HET9012972.1"
                     /translation="MQVHDVVVIGSGAGGGTVTKVLADLGISVLLMEAGPMLSMSDLK
                     EHMLPHHIPHRGAGPKGEAYSGRPTGFTYSATFGGAQLEGEPYTVAPGSDFSWFRSRI
                     LGGRTNHYGRVTLRFADYDFMGRSIDGLGFDWPITYADLAPYYDKAEAFIGVVGTVEN
                     IRSAPDGIFHTPAALRAHDTLVQRSCAKLGIRAVPARQAVITKATNGRPPCHYCGQCG
                     RGCMTASNYASSYVQIFPAMKTGRVQVLANAMARELLTDDSGRVTAVSYVDKATGSER
                     QVRCRTVVLAASACESARLLLNSKSSRHPQGLANASGMVGRYLMDTVGSSLSAFVPAL
                     SGMPHYNSDGYGNHVYVPWWGWEKQKALGFPRGYHIEVGGGYGMPGIGSFTGIVNRTE
                     GYGVRMKQAIRDEYGTSIGLSGRGEMIPNDKSFCEIDPDVKDRWGIPVLRFHWAWSDH
                     ELDQVRHMQETFRAILEGMGGQFATNAGGRGRGNAAAGNTSPANPATASTPNLNPPGG
                     HTAPASPPRPPISRGGAIIHEVGTVRMGNDPKTSPLNKYCQGHDVKNLFVADGAPFVS
                     NPDKNPTHTIVALAWRTAEYLAEEMRKGNV"
     gene            1906..2853
                     /locus_tag="VFN38_14200"
     CDS             1906..2853
                     /locus_tag="VFN38_14200"
                     /inference="COORDINATES: protein motif:HMM:NF013429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase family
                     protein"
                     /protein_id="HET9012973.1"
                     /translation="MTTSRITRRAFVAGVAAAGAVLASPRLLRAQARRAGMYVSLNGS
                     LTRQMAWPDFARLAAKVGYGGVDVNFTAAKTDGVDATRALLNELSLVPSVCNLPVAWT
                     TTDEAEFKQSLAQLDENARFANAIGLNRMMVVLSPGSPTPKEERRAFLKARLTPVAEI
                     LARSQVRLGLEFLGPLYFRQNPKTPYPFMWTLPETLAFARECGPNLGVVLDAWHWHHS
                     GGSVPEILAAGKSGIVHVHISDARPAAPEDVRDNQRHMPGEGIIDLVGFLQALKKIGY
                     EDGISPEPLGRVPADMPAEDGARLGLETTMAAMKKAGIL"
BASE COUNT          454 a         1009 c         1049 g          485 t
ORIGIN      
        1 ggtgatgtca gacattgccc ttcctcattt cttccgcgag gtattcggcg gtgcgccacg
       61 cgagcgcgac gatcgtgtgc gtcgggttct tgtccgggtt gctgacgaac ggcgcgccgt
      121 cggccacgaa caggttcttc acgtcgtgcc cctggcagta cttgttcagc gggctggtct
      181 tcggatcgtt gcccatgcgc accgtgccga cctcgtggat gatcgcgccg ccgcgcgaga
      241 tgggcggacg cggcggcgac gccggtgcgg tgtggccgcc gggcggattg aggttcggcg
      301 tcgacgccgt cgcgggattc gccggcgacg tgttgccggc ggcggcattc ccgcgtccgc
      361 gcccgccggc gttggtcgcg aactgtccgc ccatgccttc gaggatggcg cgaaacgtct
      421 cctgcatgtg gcggacctgg tcgagctcgt ggtcgctcca cgcccagtgg aaccgcagca
      481 ccgggatgcc ccagcgatcc ttcacgtcgg gatcgatctc gcagaacgac ttgtcgttcg
      541 ggatcatctc gccgcgcccc gacaggccga tcgacgtgcc gtactcgtcg cggatcgcct
      601 gcttcatgcg cacgccgtag ccttcggtgc gattgacgat gcccgtgaac gagccgatgc
      661 cgggcatgcc gtagccgccg ccgacctcga tgtgatagcc gcgcgggaag ccgagcgctt
      721 tctgcttctc ccatccccac cacggcacgt agacgtggtt gccgtagccg tcggagttgt
      781 aatgcggcat gccggacagc gccggcacga acgcggacag actggatccg accgtgtcca
      841 tcagatagcg gccgaccatg ccggacgcgt tcgcgagccc ctgcggatgc cgcgaggact
      901 tcgagttcag gagcaggcgc gccgactcgc acgcgctcgc cgcgagcacg acggtccggc
      961 accgcacctg gcgctcgctg ccggtcgcct tgtcgacgta cgacacggcg gtgaccctgc
     1021 cgctgtcgtc ggtgaggagc tcccgcgcca tcgcgttcgc caggacctgc acgcgtcccg
     1081 tcttcatcgc cgggaagatc tgcacgtagc tcgacgcgta gttcgacgcc gtcatgcagc
     1141 cgcgtccgca ctgaccgcag taatggcaag gaggacggcc gttcgtggcc ttcgtgatca
     1201 ccgcctggcg cgccgggacc gcgcggatgc cgagcttcgc gcacgagcgc tgcacgaggg
     1261 tgtcgtgcgc gcgcagtgcc gccggcgtgt ggaagatgcc gtcaggggcg ctgcggatgt
     1321 tctcgacggt gccgacgacg ccgatgaagg cctcggcctt gtcgtaatac ggcgcgaggt
     1381 cggcgtaggt gatcggccag tcgaagccga ggccgtcgat cgagcggccc atgaagtcgt
     1441 agtcggcgaa gcgcagcgtg acgcggccgt agtggttcgt ccgtccgccg aggatgcgcg
     1501 agcggaacca ggagaagtca ctgcccggcg cgaccgtgta cggctccccc tcgagctgcg
     1561 cgccgccgaa ggtggcgctg taggtgaagc cggtcggccg gccggaatag gcttctccct
     1621 tcgggccggc gccgcgatgc gggatatggt ggggcagcat gtgctccttg aggtcgctca
     1681 tgctcagcat cgggccggcc tccatgagca gcaccgagat tccgagatcc gcgaggacct
     1741 tggtcaccgt gccgccgccg gcccccgatc caatcaccac gacgtcatgg acctgcatga
     1801 gggtgctccg tgtagtcgac cgtcgactgt cgactgtcga ctgtcgactg tattgtgcat
     1861 gcatttctgg tccagccggg cgcttctggg ttatcctcag cgcccgtgac gacttcccgc
     1921 atcacccgcc gggccttcgt cgccggcgtt gccgcggccg gggcagtgct cgcgtcgccg
     1981 cgcctgctgc gcgcgcaggc gcgccgcgcc ggcatgtacg tgtcgctgaa cggctcgctg
     2041 acgcggcaga tggcgtggcc cgacttcgcc cgcctcgccg cgaaagtcgg ctacggcggc
     2101 gtcgacgtca atttcacggc ggccaagacc gacggggtcg acgcgacgcg cgcgctcctg
     2161 aacgagctgt cgctcgtgcc cagcgtctgc aacctgcccg tggcgtggac gacgacggat
     2221 gaagccgaat tcaagcagtc gctggcgcag ctcgacgaga acgcgcgctt cgccaacgcc
     2281 atcggcctga accggatgat ggtcgtgctc tcgccgggca gcccgacgcc gaaagaggag
     2341 cggcgcgcat tcctcaaggc caggctgacg ccggtcgccg agatcctggc gcgctcccag
     2401 gtgcgtctcg gcctcgagtt cctcgggccg ttgtactttc gccagaaccc gaagacgccg
     2461 tacccgttca tgtggacgct gcccgagacg ctcgccttcg cgcgcgagtg cgggccgaac
     2521 ctgggcgtgg tgctcgacgc ctggcactgg caccactcgg ggggcagcgt ccccgagatc
     2581 ctggccgccg gcaagtcggg gatcgtgcac gtgcacatct ccgacgccag gcccgcggcg
     2641 ccggaagacg tgcgcgacaa ccagcggcac atgcccggcg aaggcatcat cgatctcgtc
     2701 ggcttcctgc aggcgctgaa gaagatcggc tacgaggacg gcatcagccc cgagccgctc
     2761 ggccgcgtgc ccgccgacat gcccgcggaa gatggggcgc gcctggggct ggaaacgacg
     2821 atggcagcga tgaagaaagc cgggatcctg tgagatgaaa gcagcgtgtt gctgccgatc
     2881 accggcgagc gacagcgaag gatcgacagg cgccgatcgc cggcgtgagc ggaagcgagc
     2941 gccggcagcg cgtgggggtg gggcctcacg caaactgaga aaagaggacg agcatga
//
LOCUS       DASSYW010000894         2252 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1521162, whole genome shotgun sequence.
ACCESSION   DASSYW010000894 DASSYW010000000
VERSION     DASSYW010000894.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2252)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2252)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2252
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1521162"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(112..1491)
                     /locus_tag="VFN38_14205"
     CDS             complement(112..1491)
                     /locus_tag="VFN38_14205"
                     /inference="COORDINATES: protein motif:HMM:NF024842.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding protein"
                     /protein_id="HET9012974.1"
                     /translation="MSTLEADYLVIGAGAMGLAFADTLMSESDATVVMVDRHDQPGGH
                     WTTAYPFVRLHQPSAYYGVNSRQLGSDTIDQSGYNAGFFELASGAEVCAYFDAVMRRH
                     LLPTGRVTYLPMSEYVGDGRVRTFSGDDIAVSARRIVTSHVEIVVPSMCKPSYTVAPG
                     VVCVPPNELPRFRDGRDRYVIVGAGKTAMDACMWLLRHGVEPARLTWIKPRESWVLDR
                     AAIQPGRKFAGAVLADFANQLAAVHEATSLPDLFERLEAKGCLMRIDQTVEPTMYRCA
                     ILSQAELEQLRRIEDVVRMGHVLSLDPGRITLEDGVREVDGSVLYIDCSADGLAYREP
                     TTVFDGEHISLQTVRTCQPAFSASVIAHVEAAYPDDETRNAFCGPVPYPREPIDWLRM
                     MHAFNKNQLKWLSDPDMMAWVDSARLNALHHVSAAVSERARERIISALTAQLPTTNEK
                     LEALLASAR"
     gene            complement(1492..>2252)
                     /locus_tag="VFN38_14210"
     CDS             complement(1492..>2252)
                     /locus_tag="VFN38_14210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HET9012975.1"
                     /translation="PSLPGYGFSGKPTSTGWGVERIAAAWETLMGRLGYERYGAQGGD
                     WGAAVTTQIGRNEGRRSRDGGDMSRCVGIHLNMPMGRPPKGVTEFSADELAAIERLEY
                     YRKWDNAYAKVQMTRPQTLGYGLVDSPVSQLAWIVEKFWSWMDCDGHPENVLSRDELL
                     DNVSIYWLTASGASSARLYWESFGTFGGGEPVRLPTGVASFPKEILHAPRSWCEDAYH
                     ITHWTPMPRGGHFAAFEQPDLFVEDVSAFFATVR"
BASE COUNT          361 a          789 c          740 g          362 t
ORIGIN      
        1 cgcaggctcg aggcggccgg gtggatcgtc atccgtgtca tcgccgaaga cacccccgcc
       61 gacgttatcc gacgcctcga acaggccctg cggcggcgcg gacgtcagaa gctagcgggc
      121 tgacgccagc agcgcttcca atttctcgtt ggtcgtcggc agctgcgcgg tcagcgccga
      181 gatgatcctc tcgcgcgcgc gctcgctcac cgcggccgac acgtggtgca gcgcgttgag
      241 ccgcgccgaa tcgacccacg ccatcatgtc cgggtcggat aaccacttga gctgattctt
      301 gttgaacgcg tgcatcattc gcagccagtc gatcggctcg cgcggatagg ggacagggcc
      361 gcagaacgca ttgcgggtct cgtcgtcagg gtaggccgct tcgacgtggg cgatgacgga
      421 tgcgctgaac gccggctggc acgtgcgcac cgtctgcagc gagatgtgct caccgtcgaa
      481 caccgtggtc ggttcacggt acgccaatcc gtctgcgctg cagtcgatgt agagcaccga
      541 accgtcgacc tcgcgcacgc cgtcctcgag cgtgatgcgg cccgggtcca gcgacagcac
      601 atgacccatc cgtacgacgt cctcgatgcg ccgtagctgc tcgagctcgg cctgcgacag
      661 gatcgcgcac cggtacatcg tcggctcgac cgtttggtcg atgcgcatca ggcagccctt
      721 ggcctccagc cgctcgaaga ggtcgggcag cgacgtggct tcgtgcaccg cggcgagttg
      781 gttggcgaag tcggcgagca ccgcgccggc gaacttgcgg cccggctgga tcgccgcgcg
      841 gtccagcacc cacgattcgc gcggcttgat ccacgtcagc cgggcgggtt ccacgccgtg
      901 gcgcaacaac cacatgcagg cgtccatcgc ggtcttgccc gcgccgacga tgacgtaccg
      961 gtcgcgcccg tcgcggaagc ggggcagctc gttggggggg acacagacga cccccggcgc
     1021 gacggtgtag gacggcttgc acatcgacgg cacgacgatc tcgacgtggc tggtgacgat
     1081 gcggcgcgca gacaccgcga tgtcgtcacc gctgaacgtg cgcacccggc cgtcaccgac
     1141 gtactcgctc atcggaaggt acgtaacccg gcccgtcggc agcagatgcc ggcgcatgac
     1201 cgcgtcgaag taggcgcata cctcggcgcc actggccagc tcgaagaagc ccgcgttgta
     1261 gccggactgg tcgatggtgt cgctgcccag ctgtcgcgag ttcacgccgt agtacgccga
     1321 cggctggtgc agccgcacga acggatacgc cgtcgtccag tgaccgcccg gctggtcgtg
     1381 gcggtccacc atcaccacgg tggcatcgct ctcgctcata agggtgtcgg cgaaggccaa
     1441 gcccatcgcg ccggcgccga tcaccagata gtcggcttca agagtgctca tctatcgcac
     1501 cgtagcgaag aaggcggaga cgtcttcgac gaacaggtcc ggctgctcga aggctgcgaa
     1561 gtgcccaccg cgcggcatcg gcgtccagtg cgtgatgtgg taggcgtcct cgcaccagct
     1621 gcgaggagcg tgcaggatct ccttcgggaa cgacgccaca cccgtcggca gccgcaccgg
     1681 ctcgccgccg ccgaacgtcc cgaagctctc ccagtacagc cgcgccgacg acgcgcccga
     1741 ggcggtcagc cagtagatcg agacgttgtc gagcaattcg tcgcggctca gcacattctc
     1801 cggatggccg tcgcagtcca tccacgacca gaatttctcg acgatccagg ccagctgcga
     1861 gacgggcgaa tccaccaacc cgtagccgag cgtctgcgga cgcgtcatct gcaccttggc
     1921 gtacgcgttg tcccacttgc ggtagtactc gaggcgttcg atggcggcga gttcgtccgc
     1981 gctgaactcg gtcacgccct tgggtggcct gcccatcggc atgttgaggt ggatgccgac
     2041 gcatctgctc atgtcgccgc cgtcgcggct ccggcggccc tcgttgcggc cgatctgcgt
     2101 ggtgaccgcc gcgccccagt cgccgccctg cgccccgtag cgctcgtagc ccagccggcc
     2161 catcagcgtc tcccacgccg ccgcgatccg ctcgacgccc catccggtcg acgtcggctt
     2221 gcccgagaag ccgtaccccg gcagcgatgg gc
//
LOCUS       DASSYW010000895         3485 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1615554, whole genome shotgun sequence.
ACCESSION   DASSYW010000895 DASSYW010000000
VERSION     DASSYW010000895.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3485)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3485)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3485
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1615554"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2053
                     /locus_tag="VFN38_14215"
     CDS             <1..2053
                     /locus_tag="VFN38_14215"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HET9012976.1"
                     /translation="GDGPLDGRSDIYSLGCVLYEMLGGEPPFTGVTPQATMIQQVVAE
                     LPPLGERRPDVPEPVRRAVERALAKAPGDRFATPAEFTAALEEARSSGGHAAVAVRRR
                     QPRRVVLLAAGGALLAALALVFALAGRGAKRAEPLAIAVLPFQNLGAAEDGYFTDGIT
                     EEITSRLAMLPGLGVISRTSADQYRGSGKPLKQIGKELGADYILEGSVRWEKAPGKPS
                     RVRVTPQLIRVSDDRHLWAGRYDEVLEEVFTVQSRIAEQVASALDLALQPPHHAVLAA
                     QPTSNLRAYDFYLRGNEYFSRVGDPADLRRAEEMYSRATELDPAFALAFAKLARSHIW
                     QFQLLSDRTPARLAQARRAADSALALDPKLPEAHLALGQIHYWGELDYEKALQEFKTA
                     LAADPGNGDLAWARGLVERRLGQWIEAREDLKRAVDLDPRSLVKSLDLFELHLRRREY
                     AEAEGYVNRALELEPESPAYIFKALLLVCRDGDVAAANAVLKEGARRAGSDAIAFWVP
                     QFDFGAALWRGMDGPMRAAVNGLTLSRFGSDSAGYYLAKARTRRFDGDARNARVYFDS
                     AARVLERRSAARPEDPALHSMLGLAYAGLGRRDDAIREGRRAVELRSSAKDTWYGVDM
                     VRGLAVVYATLGEADSTVKELGTLLAVPSWISVPSLRVDPTWDPIRRDPGFQALVKPG
                     R"
     gene            complement(2054..>3485)
                     /locus_tag="VFN38_14220"
     CDS             complement(2054..>3485)
                     /locus_tag="VFN38_14220"
                     /inference="COORDINATES: protein motif:HMM:TIGR00976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HET9012977.1"
                     /translation="YRQEGRDGYDTIEWAARQPWSNGAVGTFGLSYPGAVQWLAAVEH
                     PPSLKAMVPAMTFSTPETFWYSGGVWDGSWLDWTWLNIAPDLRRRLGVAGPRTDEEAA
                     RSWDRDGATVRTYRPMLELPDFKGVAPWYYEWMRHPPGDAWWSFARLPGRYDSVSAAV
                     LNLSGWFDEMYGPSGAVENFQGAGDALVLGPWTHGVASVQRSKAGERDFSADAALDYV
                     GTVLGWMDRHVKGAASATPEPAVRVFVMGSNRWRSADRWPFPGTRPDTLYLERPASGG
                     RMGRLVKGAPAGKGGETVIHSDPAHPVADPFEGRFGAHDYRSLTPGPSIAVFETAPFA
                     APVEIIGQVVAELAVSASVPDFDLWVQLYDVAPDGTAWNLSTPGTALQRASYREGGPE
                     RRLVQPGETVRLRMDHLVTANRFLAGHRLRVVITPAFVPLFSVNPQTGAQEFESDSVR
                     AGDIRIGHAAGRVSRIILPVVPAEDR"
BASE COUNT          472 a         1267 c         1273 g          473 t
ORIGIN      
        1 cggcgacggc ccgctcgacg gccggagcga tatctacagc ctcggctgcg tcctctacga
       61 gatgctcggc ggcgagccgc cgttcaccgg cgtcaccccg caggcgacca tgatccagca
      121 ggtcgtcgcc gagctgccgc cgctcggcga gcgccggccc gacgtgccgg agccggtccg
      181 gcgcgcagtc gagcgggccc tggccaaggc gccgggcgac cggttcgcga cgcccgcgga
      241 gttcaccgcc gcgctggagg aggcccggtc ctccggcggc catgccgccg tcgccgtccg
      301 ccgccgtcag ccgcggcgcg tggtcctgct cgcggccggc ggcgccctgc tcgcggcgct
      361 cgccctggtg ttcgcgctgg cagggcgggg cgcgaagcgc gccgagccgc tcgccatcgc
      421 cgtgctgccg ttccagaacc tcggcgccgc ggaggacggc tacttcaccg acggcatcac
      481 cgaggagatc accagccggc tggcgatgct gcccggcctc ggcgtcatct cccgcaccag
      541 cgccgaccag taccggggca gcggcaagcc gctcaaacag atcggcaagg agctcggggc
      601 cgactacatc ctcgagggca gcgtgcgctg ggagaaggcg ccggggaagc cgagccgcgt
      661 ccgcgtcacg ccgcagctca tccgggtatc ggacgaccgt catctctggg cgggccggta
      721 cgacgaggtg ctggaggagg tcttcacggt gcagtcgcgg atcgccgagc aggtcgcgag
      781 cgcgctcgac ctggcgctcc agccgccgca ccacgcggtc ctcgcggcgc agcccacgtc
      841 gaacctccgg gcctacgact tctatctccg cggcaacgag tacttcagcc gggtgggcga
      901 cccggccgat ctccgccggg cggaggagat gtactcgcgg gcgacggagc tcgatcccgc
      961 gttcgcgctc gccttcgcga agctggcgcg gagccacatc tggcagttcc agctcctgtc
     1021 cgaccggacg ccggcgcggc tggcccaggc gcggcgcgcg gccgactcgg cgctcgcgct
     1081 cgatccaaag ttgccggagg cgcacctcgc gctcggccag atccactact ggggcgagct
     1141 cgattatgag aaggcgctcc aggagttcaa gaccgcgctc gcggccgatc ccggcaacgg
     1201 cgacctggcc tgggcgcgcg gcctggtgga gcggcgcctc ggccagtgga tcgaggcccg
     1261 ggaggacctc aagcgggcgg tggatctcga cccgcggtcg ctggtcaaga gtctcgacct
     1321 gttcgagctg cacctgcggc ggcgggagta cgcggaggcg gaggggtatg tcaaccgcgc
     1381 gctggagctc gagcccgagt cacccgccta catcttcaag gcgctgctgc tggtgtgccg
     1441 ggacggcgac gtcgccgccg ccaacgcggt cttgaaggaa ggcgcgcgcc gcgccggcag
     1501 cgatgcgatc gccttctggg tgccgcagtt cgacttcggg gcggcgctgt ggcgcgggat
     1561 ggacggcccg atgcgggcgg cggtgaacgg gctcacgctg agccggttcg ggtcggactc
     1621 cgcggggtac tacctcgcga aggcgcggac ccggcggttc gacggcgacg cgcggaacgc
     1681 gcgggtctat ttcgactcgg cggcgcgggt gctggagcgg cggagcgccg cgcggccgga
     1741 ggatccggcg ttgcactcga tgctggggct ggcgtatgcg gggctcgggc ggcgggatga
     1801 cgccatccgt gagggccggc gcgcggtgga gctgcggtcg tcggcgaagg acacgtggta
     1861 cggggtggat atggttcggg gcctggcggt ggtgtatgcg acgctgggag aggcggactc
     1921 gacggtgaag gagctgggga cgctgctggc ggtgccgtcg tggatttcgg tgccctcgct
     1981 gcgagtcgac ccgacgtggg atccgatccg gcgcgatccc gggttccagg cgctcgtcaa
     2041 gccagggcgc tgatcatcgg tcctccgccg ggaccaccgg caggatgatg cgggacaccc
     2101 gtcccgccgc atgcccgatc cggatgtcgc ccgcccgcac gctgtcgctc tcgaactcct
     2161 gcgcgccggt ctgcgggttg accgagaaca gcggaacgaa cgccggcgtg atgacgacgc
     2221 gcagccgatg ccccgcgagg aaccggttgg ccgtgaccag gtggtccatc cggagccgga
     2281 ccgtctcgcc cggctgcacc agccgccgct ccgggccgcc ctcgcgatag ctcgcccgct
     2341 ggagcgccgt ccctggggtc gagaggttcc acgcggtccc gtcgggcgcc acgtcgtaga
     2401 gctgcaccca caggtcgaag tccggcaccg aggcgctcac cgccagctcg gccaccacct
     2461 ggccgatgat ctccaccggc gccgcgaacg gcgcggtctc gaacaccgcg atgctcggcc
     2521 cgggcgtgag cgagcggtag tcgtgcgcgc cgaaccgtcc ctcgaacgga tcggccaccg
     2581 gatgcgcggg atccgagtgg atgacggtct ctcctccctt tccggccggc gcgcccttca
     2641 ccaggcgccc catcctgccg ccggatgcag ggcgctcgag gtagagcgtg tcggggcgag
     2701 ttccgggaaa cggccagcga tcggcactgc gccaccggtt cgagcccatc acgaacaccc
     2761 gcaccgccgg ctcgggcgtc gccgaggcgg cgcccttcac gtggcggtcc atccatccca
     2821 gcaccgtccc aacgtagtcc agcgccgcgt cggcgctgaa gtcccgctcg cccgccttgc
     2881 tgcgctgtac ggacgcgacg ccgtgggtcc agggcccgag cacgagcgcg tcgcccgccc
     2941 cctggaagtt ctccaccgct ccgctcggcc cgtacatctc gtcgaaccag cccgagaggt
     3001 tgagcaccgc cgcgctcacg ctgtcatagc gccccggcag ccgcgcgaag ctccaccagg
     3061 catcgccggg cggatggcgc atccactcgt agtaccaggg cgccacgccc ttgaagtcgg
     3121 gcagctcgag catcggccgg taggtgcgga ccgtggctcc gtcgcgatcc caggaccgtg
     3181 ccgcctcttc gtcggtccgc ggccccgcca cgccgagccg gcggcgcagg tccggcgcga
     3241 tgttgagcca ggtccagtcg agccacgatc cgtcccacac gccgcccgag taccagaagg
     3301 tctccggcgt cgagaaggtc atcgcgggca ccatcgcctt gagcgagggc ggatgctcga
     3361 ccgccgcgag ccactgcacg gcgccggggt acgagagccc gaaggtcccg accgccccgt
     3421 tcgaccaggg ctgacgggcc gcccactcga tcgtgtcgta gccgtcccgg ccctcctggc
     3481 gatag
//
LOCUS       DASSYW010000896         2231 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_248150, whole genome shotgun sequence.
ACCESSION   DASSYW010000896 DASSYW010000000
VERSION     DASSYW010000896.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2231)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2231)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2231
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_248150"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..310)
                     /locus_tag="VFN38_14225"
     CDS             complement(<1..310)
                     /locus_tag="VFN38_14225"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HET9012978.1"
                     /translation="MAVLIASDLVKDVAGAPLLRGVSLKLERRERLTVSGPNGSGKTT
                     LLRMLACELSLDGGELTLAKGARLALHDQRPPRERDVSLRDYVLSGCREPLELEAQLG
                     E"
     gene            356..1420
                     /locus_tag="VFN38_14230"
     CDS             356..1420
                     /locus_tag="VFN38_14230"
                     /EC_number="1.1.5.-"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016901 - oxidoreductase activity, acting
                     on the CH-OH group of donors, quinone or similar compound
                     as acceptor [Evidence IEA];
                     GO_function: GO:0070968 - pyrroloquinoline quinone binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HET9012979.1"
                     /translation="MRRLALIVPLALALGACGGSAADGARTAGSTPSASTVATGLRIP
                     WEIAFLPGGDALITERPGRVRLLTAQRTLRTVAGIPVVTGGEDGLLGLALDPAFARNR
                     LVYVFLTTRSGNVVRRYRYSGGRFALPRTIVRGIRAADNHDGGRLRFGPDGRLYISTG
                     DAVQPSLAQDRRALNGKLLRLGLGAARGRGGRPQIVSLGHRNPQGFDWQPGTGRLYED
                     EHGQTGNDEINLIRAGANYGWPVFQGGARRAGFTAPLTTYSPSIAPSGATFVRRGGSA
                     WTGDYLVGALRGEQIRRLRFRGSRVLVNQALFVGRFGRIRTVVEGPDGALYALTNNTD
                     GRGTPKPGDDRVLRIVPPGS"
     gene            1434..>2231
                     /locus_tag="VFN38_14235"
     CDS             1434..>2231
                     /locus_tag="VFN38_14235"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HET9012980.1"
                     /translation="MRTGLPLALVIGVLLAAAPAGAANEPYVAIRGYDEPGTPAMYDK
                     VFVRKFGSASAKRVLVLVPGFVSGSGDFTLVARELIKRVPGLQVWAVDRRSNAFEDTS
                     KFQPGTSADEAYDYYLDKLAFKIVDGPRDAPFARGWGLKVAMEDLRRVILAAKRGGHR
                     VILGGHSLGGSSTVAYATWDFKGKPGYKDVDGLVLIDGGLLGSFDSANLSQARRRKAK
                     IDSGEPFTALLEGLPPWAAGVFAEVAAILAKQAPNAVSKAQNYALLPA"
BASE COUNT          290 a          820 c          813 g          308 t
ORIGIN      
        1 gctcgccgag ctgcgcctcg agctcgagcg gctcgcgaca gcccgaaagc acgtagtcgc
       61 gcagcgagac gtcgcgctcg cgcggcgggc gctggtcgtg cagcgccagc cgcgctccct
      121 tggccagggt gagctcgcct ccgtcgagcg agagctcgca ggccagcatt cgcagcagcg
      181 tggtcttccc ggaaccgttg ggcccagaca cggtcaggcg ctcccgccgt tcgagcttga
      241 gggagacgcc ccgcagcagg ggcgcgccag cgacgtcctt gacgaggtcg gaggcgatga
      301 gcacggccat gcgggcatgt ttgcgggtcg cgaccggccg ggcagacttc gcgccatgcg
      361 ccgcctggcc ctgatcgtgc cgctggcgct ggcgctcggc gcctgtggcg gatccgcggc
      421 cgacggcgcg cggaccgccg gctccacgcc gtcggcgagc acggtggcca ccgggctgcg
      481 aatcccgtgg gagatcgcgt tcctgcccgg cggcgacgct ctcatcaccg aacggccggg
      541 ccgggtgcgc ctgctcaccg cgcagcggac gctgcgcacg gtggcgggca tcccggtcgt
      601 gaccggcgga gaggacggcc tgctgggcct cgcgctcgac ccggccttcg cgcgcaaccg
      661 gctcgtctac gtctttctca ccacgcgctc gggcaacgtc gtgcgccgct atcgctacag
      721 cggcgggcgc ttcgcgctcc cgcgcacgat cgtgcgcggg atccgcgccg cggacaacca
      781 cgacggcggc cggctgcgct tcgggcccga cggccgcctg tacatctcca ccggcgacgc
      841 cgtccagccg tcgcttgccc aggaccgccg cgcgctgaac ggcaagcttc tgcgcctcgg
      901 cctgggagcc gcgcgcggcc gcggcgggcg cccgcagatc gtctcgctcg gccaccgcaa
      961 tccgcagggc ttcgactggc agccgggcac cggccgcctc tacgaggacg agcacggcca
     1021 gacgggcaac gacgagatca acctgatccg cgcgggcgcg aactacggct ggcccgtgtt
     1081 ccagggcggc gctcgccgcg ccggcttcac cgcgcctctg accacgtact cgccgagcat
     1141 cgcgccgtcc ggggcgacgt tcgtgcgccg cggcggctcg gcgtggaccg gcgactacct
     1201 cgtgggcgcg ctgcgcggcg agcagatccg gcgtctgcgc ttccgcgggt cgcgcgtgct
     1261 ggtcaaccag gcgctgttcg tggggcgctt cgggcgcatc cgcaccgtcg tcgagggccc
     1321 ggacggggcg ctgtacgcgc tcacgaacaa cacggacgga cgtggcacgc cgaagccggg
     1381 cgacgaccgc gtgctgcgga tcgtgccgcc gggctcctga tacgttcgcg ggcttgcgga
     1441 ccggccttcc cctcgcgcta gtcatcggcg ttctgctcgc cgccgctccg gcgggcgccg
     1501 cgaacgagcc ctacgtggcg atccgcggct acgacgagcc gggcaccccg gccatgtacg
     1561 acaaggtgtt cgtgcgcaag ttcggctccg cgtcggcgaa gcgcgtgctc gtgctcgtgc
     1621 ccggcttcgt gagcgggtcg ggcgacttca cgctggtggc ccgggagctg atcaagcgcg
     1681 tgcccggcct gcaggtgtgg gcggtggacc gccgctccaa cgccttcgag gacacgtcga
     1741 aattccagcc tggcacgtcg gccgacgagg cctacgacta ctacctcgac aagctggcct
     1801 tcaagatcgt cgacggcccg agggacgcgc cattcgcccg cggatgggga ctgaaggtgg
     1861 cgatggagga cctgcgtcgg gtgatcctgg cggccaagcg gggcgggcac agggtgatcc
     1921 tgggcggcca ctcgctcggc ggctcgtcga ccgtcgccta cgcgacctgg gacttcaagg
     1981 ggaagcccgg ctacaaggac gtggacgggc tcgtgctgat cgacggcggc ctactggggt
     2041 cgttcgacag cgccaacctc tcgcaggcgc gcagacggaa ggcgaagatc gactccggcg
     2101 agcccttcac cgccctgctg gagggcctcc ccccgtgggc ggccggcgtg ttcgcagagg
     2161 tcgccgccat cctcgccaag caggcgccca acgcggtctc caaggcccag aactacgcgc
     2221 tgctgcccgc g
//
LOCUS       DASSYW010000897         2367 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1408849, whole genome shotgun sequence.
ACCESSION   DASSYW010000897 DASSYW010000000
VERSION     DASSYW010000897.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2367)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2367)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2367
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1408849"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1410)
                     /locus_tag="VFN38_14240"
     CDS             complement(<1..1410)
                     /locus_tag="VFN38_14240"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003883 - CTP synthase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006241 - CTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HET9012981.1"
                     /translation="MQTSTRQHTTKYIFVTGGVVSSLGKGIAAASLARLLVERGLRVT
                     MMKFDPYLNVDPGTMSPFQHGEVFVTDDGAETDLDLGHYERFIDRSLSQANNVTTGRI
                     YLNVITKERRGEYLGSTVQVIPHITDEIKGAIRRISPENDVVVVEIGGTVGDIESQPF
                     LEAIRQFRHDVGRENAIFVHLTLIPYIAAAGELKTKPTQHSVRELMELGIQPDFLIVR
                     TERPVPDEVKRKIALFCNVDYGAVIESPDVKSIYQIPLAFRDQGFDDKVIERFGLERP
                     ATDLAPWREMVQRVVAPHERVRIAIVGKYTDYADSYKSVGEALIHGGIANDVGVDISW
                     VSSDAFTDADAAKGILSQHDGLLVPGGFGVRGVEGMVEAIRCARETGVPFFGICLGMQ
                     TAIIEFARNVCGLDDSHSSEFAPECDNAVIALMESQQHVTDMGGTMRLGAYPCRLARG
                     SRAAEVYGVAEVSERHRHRY"
     gene            complement(1410..2171)
                     /gene="kdsB"
                     /locus_tag="VFN38_14245"
     CDS             complement(1410..2171)
                     /gene="kdsB"
                     /locus_tag="VFN38_14245"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: protein motif:HMM:NF003952.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008690 - 3-deoxy-manno-octulosonate
                     cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HET9012982.1"
                     /translation="MRTLAVIPARLGATRLPRKPLQLLAGVPIIVRVLERVQALRVAD
                     VVVVATDSDEIAQRVHEAGGEAIATDVRHPSGTDRVAEVVRAAFRDQFDAIVNVQGDE
                     PFVSGAAVRGALAQVTERGFPLGTAAARAPLGVLGNPDAVKVVAADDGAAMYFSRAGI
                     PFQRDPADAAELAERVLHHVGVYAYTPDALARWVALPPHPLERIERLEQLRPLAAGLR
                     MGVAVVDGPLRGGIDTEADLDRANREWLTFIPSES"
BASE COUNT          347 a          798 c          867 g          355 t
ORIGIN      
        1 gtaccggtgg cggtggcgct cgctcacctc ggcaacgccg tacacttcgg ccgcgcgcga
       61 cccacgcgcc agacggcacg gataggcacc gagtcgcatg gtgcctccca tgtcggtgac
      121 gtgctgctgc gattccatga gcgcgatgac ggcgttgtcg cactcgggcg cgaactcgga
      181 cgagtggctg tcgtcgaggc cgcagacgtt gcgcgcgaac tcgatgatgg cggtctgcat
      241 gccgaggcag atgccgaaga acggcacgcc ggtctcgcgc gcgcagcgga tggcttcgac
      301 catcccttcc acgccgcgca cgccgaaccc gccgggcacg agcaggccgt cgtgctgcga
      361 gaggatgccc ttcgccgcgt cggcgtcggt gaaggcgtcg ctggagaccc agctgatgtc
      421 cacgcccacg tcgttggcga tgccgccgtg gatgagcgcc tcgcccacgc tcttgtagct
      481 gtcggcgtag tcggtgtact tgccgacgat ggcgatgcgc acgcgctcgt ggggcgcgac
      541 gacgcgctgc accatctcgc gccacggggc gaggtcggtg gcggggcgct cgaggccgaa
      601 ccgctcgatc accttgtcgt cgaagccctg gtcgcggaag gcgagcggga tctggtagat
      661 ggacttcacg tcgggcgact cgatcaccgc gccgtagtcc acgttgcaga acagcgcgat
      721 cttgcgcttc acctcgtcgg ggacgggacg ctcggtgcgg acgatcagga agtccggctg
      781 gatcccgagc tccatcagct cgcgcacgga gtgctgcgtc ggcttggtct tgagctcgcc
      841 cgcggcagcg atgtagggga tgagcgtgag gtggacgaag atcgcgttct cgcggccgac
      901 gtcgtggcgg aactggcgga tcgcctcgag gaagggctgc gactcgatgt cgccgacggt
      961 gccgccgatc tccaccacga cgacgtcgtt ctcgggggag atgcggcgga tggcgccctt
     1021 gatctcgtcg gtgatgtgcg ggatcacctg cacggtggat ccgaggtact cgccgcgccg
     1081 ctccttcgtg atgacgttca ggtagatgcg ccccgtcgtc acgttgttcg cctgcgacag
     1141 cgaccggtcg atgaaccgct cgtagtggcc gagatcgaga tcggtctcgg cgccgtcgtc
     1201 ggtgacgaac acctcgccgt gctggaaggg cgacatcgtg cccggatcga cgttcaggta
     1261 cgggtcgaac ttcatcatcg tgacgcgcag cccgcgctcc acgaggagcc gggccagcga
     1321 tgccgcggcg atgcccttgc cgagggagga gaccacgccg cccgtcacga agatgtattt
     1381 cgtcgtgtgc tgccgggtgc tcgtctgcat cagctctcgc tcgggatgaa ggtcagccac
     1441 tctcggttcg ccctgtccag atccgcttcc gtatcgatgc cgccgcgcag cggcccgtcc
     1501 accaccgcca cgcccatccg cagcccggcc gcgaggggcc ggagctgctc cagccgctcg
     1561 atgcgctcca gcggatgggg cggcagcgcg acccagcggg cgagggcgtc gggggtgtag
     1621 gcgtagacgc cgacgtgatg cagcacccgc tcggccagct ccgcggcgtc cgccgggtcg
     1681 cgctggaacg ggatgcccgc gcgggaaaaa tacatcgccg ccccgtcgtc ggcagcgacg
     1741 actttcaccg cgtcggggtt cccgagcacg cccagcggcg cgcgcgccgc ggcggtgccg
     1801 agggggaagc cgcgctcggt gacctgggca agggcaccgc ggaccgccgc gccggacacg
     1861 aacggctcgt cgccctgcac gttgacgatg gcgtcgaact ggtcgcggaa ggcggcccgg
     1921 acgacttcgg ccacgcggtc ggtgccggag gggtgccgga cgtcggtggc gatggcctcg
     1981 ccgcccgcct cgtgcacgcg ctgggcgatc tcgtcgctgt cggtggcgac gacgacgacg
     2041 tcggcgacgc ggagggcctg gacgcgttcg agcacgcgga cgatgatggg aaccccggcg
     2101 aggagctgca gcggcttgcg gggcagacgc gtggcgccga gtcgcgccgg gatgacggcg
     2161 agcgtcctca cgggcggcgc acggggccgc ggggatggga tgcgcacgcg aggcgcgcgc
     2221 cggacgcaac tttcacgcca agcaagatac ggcgcggtac gcggttacgc aaatccgccg
     2281 cgcgctagaa gcgcgacagc gagatcccga tgccgacctc gctcccgctc cgtcccgcca
     2341 ccgcgcgcgt gtactccagc cgcagga
//
LOCUS       DASSYW010000898         2778 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_892925, whole genome shotgun sequence.
ACCESSION   DASSYW010000898 DASSYW010000000
VERSION     DASSYW010000898.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2778)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2778)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2778
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_892925"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..260)
                     /locus_tag="VFN38_14250"
     CDS             complement(<1..260)
                     /locus_tag="VFN38_14250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012983.1"
                     /translation="MTRAELEDDARALLADGTLYEAAARNLGARALEGRGVSYAIALP
                     VTGSHVVVRHNRHGGLLAGITRDYFLPPTRAPYELAVSLRLA"
     gene            complement(317..1930)
                     /locus_tag="VFN38_14255"
     CDS             complement(317..1930)
                     /locus_tag="VFN38_14255"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HET9012984.1"
                     /translation="MPLRLISPDGTKTYDLRDGVPLIVGRAPTCDLPVFHPTISRRHA
                     ELTSDGHVLSLRDLGSSNGTFVNGTKIEKGKAVIDDLLAFGKVGFRLESFGAPTPSAS
                     HPGVARTTLGATIVRQIPMRDPTAAITTLGESSGGPGGLTRSIVSPLSAPPSDKSQQK
                     LATLLEVSKGLTRAVDVDTILDKIVGYAYGTLEVDRVAILLIDESGELVPKIARDKRG
                     GDVPRSVPQSIARQAVVEKVALLTDNAGEDERFGGQSIVMQQVRSAICAPLVGSADRV
                     LGVLYVDNPSVAHRFSDDDLEFLVAFAGIAAVAIENSQFAERIRKEGIVRSNFERYFA
                     PQLAARIADSAEATKLGGDKRPVAVLFSDIRGFTALSETMNPDAMATLLTEYFTEMVE
                     CVFRHGGMLDKFIGDAVMAQWGAPLGNADDADRAMQAAIDMMTALDELNVRWRKDGRP
                     TLEIGIGLNYGEAFAGNIGSERRLEFTVIGDTVNTASRLCSAAGAGEILISDEMRKAL
                     KSPPKLTKRPPMELKGKSQPVPVYRVKLG"
     gene            complement(1992..>2778)
                     /locus_tag="VFN38_14260"
     CDS             complement(1992..>2778)
                     /locus_tag="VFN38_14260"
                     /inference="COORDINATES: protein motif:HMM:NF012640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="anthranilate synthase component I family
                     protein"
                     /protein_id="HET9012985.1"
                     /translation="DAFQVLLARRIRVQHDFPSDALYRALRALNPSPYMYHLVLDGLE
                     LVGSSPELLVRVEGRAVTVRPIAGTRPRGPTPEADAAMAEELSTDEKERAEHVMLVDL
                     GRNDVGRIAEYGSVAVSDYMTVERYSHVLHLVSQVTGRLRDGLDALDAFRATFPAGTM
                     TGAPKVRAMEIIDELEPERRGAYAGAVGHISAGGARMDLAITIRTCVLHDGVASVQSG
                     AGIVQDSVPENEWAETENKARAMLTAIGRVRDAVRRSTGPAST"
BASE COUNT          393 a          974 c          967 g          444 t
ORIGIN      
        1 tccgcgagcc gcagcgacac ggccagctcg tagggggcgc gggtgggcgg gaggaagtag
       61 tccctggtga tcccggccag gaggccgccg tgccgattgt gccgcacgac cacgtgcgac
      121 cccgtgacgg gaagcgcgat cgcgtacgat acccctcggc cctccagtgc gcgtgcgccg
      181 agattgcgag cggccgcctc gtacaaggtc ccgtccgcca gcagcgcgcg cgcgtcgtcc
      241 tcgagctcgg cccgggtcac tgccgcgcac cgtcccgcgg tgacacgcac gtacccgggg
      301 ggcggcgcgc tgggcatcac ccgagcttca cgcggtacac cggcacgggc tggctcttgc
      361 ccttgagctc cattggagga cgcttggtga gcttgggcgg cgacttgagt gccttgcgca
      421 tctcgtcgga gatcaggatc tccccggctc ccgccgccga acagaggcga ctggccgtgt
      481 tcaccgtgtc accgatgacg gtgaactcca gccgtcgctc cgagccgatg ttgccggcga
      541 acgcttcgcc gtagttcagc ccgatgccga tttcgagcgt gggcctgccg tccttgcgcc
      601 accgcacgtt cagctcgtcc agcgccgtca tcatgtcgat cgccgcctgc atggcgcgat
      661 cggcgtcgtc cgcgttgccg agcggcgcgc cccactgcgc catcaccgcg tcgccgatga
      721 acttgtccaa catgccgccg tgccggaaca cgcactccac catctcggtg aagtattcgg
      781 tgagcagcgt ggccatcgcg tcggggttca tcgtctccga gagcgcggtg aacccacgga
      841 tgtcgctgaa cagcaccgcc acgggccgct tgtcgccgcc cagcttggtg gcctccgcgg
      901 aatccgcgat gcgcgcggcg agctgcggcg cgaagtagcg ctcgaagttg ctgcgcacga
      961 ttccttcctt gcggatccgc tcggcgaact gcgagttctc gatggccacg gcggcgatgc
     1021 cggcgaaggc gacgaggaat tccaggtcgt cgtcgctgaa gcggtgcgcg acgctcgggt
     1081 tgtccacgta gagcacgccg agcacgcggt cggcgctgcc gaccagcggc gcgcagatcg
     1141 ccgagcgcac ctgctgcatg acgatggact gtccgccgaa tcgctcgtcc tcgccggcgt
     1201 tgtcggtgag gagggccacc ttctccacga cggcctgccg cgcgatggac tgcggcacgg
     1261 aacgtggcac gtcgccgccc cgcttgtcgc gggcgatctt gggcaccagc tcgccgctct
     1321 cgtcgatgag caggatcgcc acgcggtcga cctcgagcgt gccgtacgcg tagccgacga
     1381 tcttgtcgag gatcgtgtcg acgtccaccg cgcgggtgag ccccttcgac acctcgagca
     1441 gcgtggcgag cttctgctgg ctcttgtcgc tcggtggcgc actgagcggc gacacgatcg
     1501 acctggtcag cccccccggt ccgcccgacg actcgccgag ggtggtgatg gcggcggtgg
     1561 gatcgcgcat cgggatctgg cgcacgatcg tcgcgcccag cgtggtccgc gcaacgccgg
     1621 ggtgcgacgc cgacggcgtg ggcgccccga acgattccag gcggaagccg accttgccga
     1681 acgcgagcag gtcgtcgatc accgccttgc ccttctcgat cttggtgccg ttgacgaagg
     1741 tcccgttgct ggatccgagg tcccgcagcg acaggacgtg cccgtccgag gtcagctccg
     1801 cgtggcggcg cgagatggtc gggtggaaga ccgggagatc gcaggtgggc gcccgcccga
     1861 cgatcagcgg cacgccgtcg cggaggtcgt aggtcttcgt gccgtcgggg ctgatgagtc
     1921 ggaggggcat cggcctcaaa tatggcaccg tgcggagtga tccgcaccga ttatcccgtc
     1981 attccgggag cttaagtcga tgccgggccg gttgaacggc gcaccgcatc ccgcacgcgc
     2041 ccgatggcgg tcaacatcgc ccgcgccttg ttctccgtct ccgcccactc gttctccggc
     2101 acggagtcct ggacgatgcc tgcccccgac tgcacggaag ccacgccgtc gtggagcacg
     2161 caggtgcgga tggtgatcgc caagtccatg cgagctccgc cggcggagat gtggcccacg
     2221 gcacccgcgt acgccccccg tcgttccggc tccagctcgt cgatgatctc catcgcgcgc
     2281 accttggggg cgccggtcat ggtgccggcg gggaaggtgg cgcggaaggc gtcgagcgcg
     2341 tcgagcccgt cccggagccg ccccgtcacc tggctcacga ggtggagcac gtgcgagtag
     2401 cgctccacgg tcatgtagtc cgacacggcg acgctgccgt attcggcgat ccgtcccacg
     2461 tcgttccgcc cgaggtccac gagcatcacg tgctcggccc gttccttctc gtccgtcgac
     2521 agctcctcgg ccatcgcggc gtccgcttcg ggggtggggc cgcggggccg cgtgccggca
     2581 atcggacgca ccgtcacggc gcgaccctcg acgcggacca gcagctccgg cgagctgccg
     2641 acgagctcca ggccgtcgag cacgagatgg tacatgtacg gcgacggatt cagcgcgcgc
     2701 agcgcacggt agagcgcgtc cgacgggaag tcgtgctgta cgcggatccg gcgcgccagc
     2761 aggacctgga aggcgtcg
//
LOCUS       DASSYW010000899         2193 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1505124, whole genome shotgun sequence.
ACCESSION   DASSYW010000899 DASSYW010000000
VERSION     DASSYW010000899.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2193)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2193)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2193
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1505124"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1028)
                     /locus_tag="VFN38_14265"
     CDS             complement(<1..1028)
                     /locus_tag="VFN38_14265"
                     /inference="COORDINATES: protein motif:HMM:NF023282.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MtrB/PioB family outer membrane beta-barrel
                     protein"
                     /protein_id="HET9012986.1"
                     /translation="MRITTVCFTVALAMAPLATSAQTTTATQPTTPAIASPWTGTFDF
                     GLRGTNLNGDGARYDRYRDLGNGLFLEGVRVTRERSDWLLNFSADHVGWSDQRFVANA
                     ERLGKFKSWFMWDQIPMLLSRTTRTLFTGIGSGQLQISDAVQTQVQAVPSAISPLFNQ
                     FGSVFETETRRHIAEGGFSYDASRELTINAKIRYTNREGTIPYGGSFGHSSLVEMPAP
                     TDHSLTTADGGAEFSRDRVLVRAGYIGSFFHNDVTSVVFDNPFRATDIAGTPSRGRLS
                     LPPSNSFMGVNGLASVRLPGRSRATAYVSTGWLTDAGEPLIPQTINSAVVTAPLARTT
                     VEGEAKTTA"
     gene            complement(1037..2041)
                     /locus_tag="VFN38_14270"
     CDS             complement(1037..2041)
                     /locus_tag="VFN38_14270"
                     /inference="COORDINATES: protein motif:HMM:TIGR03508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DmsE family decaheme c-type cytochrome"
                     /protein_id="HET9012987.1"
                     /translation="MAKRRDPVSLLITALLIVWMVALGRAVAAGGPPQAAGSAPAKAE
                     PAKTAPAKAVPAATATAQGTEYIGEDTCLTCHEDRNYKGTRHALASLPKSPAATHGCE
                     SCHGPGKAHAESGGEADKILNPTKVTPQRASEVCATCHNRGEHAVWTGSQHDSRNVGC
                     VSCHSVHAPKGPKQLKVATQPQLCASCHRDKIAKLDRSGHMPVREGKMQCTTCHNVHG
                     STNVRLLRTGDSIGELCTSCHAEKRGPFLWEHAPSRDGCTTCHDPHGSSNERMLVSKP
                     PILCQRCHVATRHPSTIYDAGLIGAGATPSVRIYARSCVTCHSAIHGSNHPSGQRFIR
                     "
BASE COUNT          310 a          691 c          800 g          392 t
ORIGIN      
        1 gccgtcgtct tcgcttcgcc ctcgaccgtc gtccgcgcga gcggggcggt cacgaccgcc
       61 gagttgatcg tctgcggaat cagcggctcg cccgcatcgg tgagccagcc ggtcgagacg
      121 taggccgtgg cgcgcgagcg gcccggcagg cggaccgagg cgaggccgtt gacgcccatg
      181 aacgaattgc tgggcggcag cgacagccgg cctcgcgacg gcgtcccggc gatgtcggtg
      241 gcgcggaacg ggttgtcgaa gaccaccgag gtgacgtcgt tgtggaagaa ggagccgatg
      301 tagccggcgc gcacgagaac ccggtcgcgg gagaactcgg cgccgccgtc ggcggtcgtc
      361 agcgagtgat cggtgggcgc cggcatttcg acgaggctgc tgtggccgaa cgatccgccg
      421 taggggatcg tgccctcacg attcgtgtag cggatcttgg cgttgatcgt cagctcgcgg
      481 ctggcgtcgt agctgaaccc gccttcggcg atgtgccgcc gcgtctcggt ctcgaacacc
      541 gagccgaact ggttgaagag cgggctgatc gccgacggca ccgcctgcac ctgcgtctgc
      601 acggcgtccg agatttgcag ctgccccgac ccaatgccgg tgaacagcgt gcgggtcgtc
      661 cggctcagga gcatcgggat ctgatcccac atgaaccagc tcttgaattt gccgagccgt
      721 tcggcgttgg cgacgaagcg ctggtcggac cagcccacgt gatcggccga gaagttcagg
      781 agccagtcgc tccgctcgcg cgtgacccgc accccttcca gaaacaggcc gttgcccaga
      841 tcgcgatagc ggtcgtagcg ggcgccgtcg ccgttcaggt tcgtgccgcg gaggccgaag
      901 tcgaacgtgc ccgtccaggg cgatgcgatg gccggcgtgg tcggctgcgt cgccgtcgtc
      961 gtttgcgcgc tcgtggccag cggggccatc gcgagcgcta ccgtgaagca gacagtagtg
     1021 atgcgcatga tgaccctcac ctgatgaagc gctggccgct cggatggttc gacccgtgaa
     1081 tcgccgagtg acacgtgaca caggaccgcg cgtagatgcg cacgctcggc gtggcgccgg
     1141 ccccgatcag cccggcgtcg tagatcgtgc tcggatgccg cgtcgcgacg tggcaccgct
     1201 gacagagaat cggcggcttc gagacgagca tgcgctcgtt cgaggagccg tggggatcgt
     1261 ggcaggtcgt gcagccgtcg cggctcggcg cgtgttccca caggaacggg ccgcgcttct
     1321 cggcgtggca cgaggtgcag agctcgccga tcgagtcgcc ggtgcgcagc agccggacgt
     1381 tggtcgatcc gtggacgttg tggcaggtgg tgcactgcat cttgccttcg cgcaccggca
     1441 tgtggccgga gcgatcgagc ttggcgatct tgtcgcggtg gcacgacgcg cagagctgcg
     1501 gctgcgtcgc caccttcaac tgcttgggcc ccttcggcgc gtgcaccgaa tggcacgaca
     1561 cgcagccgac gttgcgcgag tcgtgctggc tgccggtcca gacggcgtgc tcgccgcggt
     1621 tgtgacaggt cgcacacact tcgctggcgc gctgcggagt cactttcgtg gggttgagga
     1681 tcttgtcggc ttcaccgccg ctctcggcgt gcgccttgcc cggcccgtga cagctttcgc
     1741 agccgtgggt cgccgccggc gacttcggga gcgaggcgag cgcgtggcgc gtgcctttgt
     1801 agttgcggtc ctcgtggcac gtcaggcagg tgtcttcgcc gatgtactcg gtgccctggg
     1861 cggtggcggt cgctgcgggt accgctttgg cgggtgccgt tttcgccggt tccgccttcg
     1921 cgggtgccga accggcagct tggggcggcc cgccggccgc gacggcacgg ccaagggcca
     1981 ccatccacac aatcaggagg gcggtgatga gcagagagac cgggtcacgg cgtttggcca
     2041 tggccgggcc ctaggcaaat ggagtgccgt tattcgatct tgtggcagct ctcgcagtcc
     2101 tggccgatac tcttgccgtc tttcgacttg tggttgtcgt cgtggcagcg gaaacagccc
     2161 gggaagtcca tgtgtccaat gttgttaggg tag
//
LOCUS       DASSYW010000900         3299 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1555975, whole genome shotgun sequence.
ACCESSION   DASSYW010000900 DASSYW010000000
VERSION     DASSYW010000900.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3299)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3299)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3299
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1555975"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..230
                     /locus_tag="VFN38_14275"
     CDS             <1..230
                     /locus_tag="VFN38_14275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012988.1"
                     /translation="VRIRQTPFEHVVIVRGVSERRGPASVAATLYEETAESRTKRDAL
                     ATQIRSMPADEWDTGRPTKRDRREIERFRRR"
     gene            complement(273..971)
                     /locus_tag="VFN38_14280"
     CDS             complement(273..971)
                     /locus_tag="VFN38_14280"
                     /inference="COORDINATES: protein motif:HMM:NF014305.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012989.1"
                     /translation="MSTGLRRTERHIAVTRTARYYVVGGTDAAADETLRDLWVVCHGY
                     GQLAGTFVAPFEKLAAPWRRIVAPEALSRFYLDATRKPGDAEPRVGATWMTREDRERE
                     IDDQVAYLDALVDRVRPGRAAGGVRLRVLGFSQGVATVVRWVDRGRARADEIILWAGS
                     FPPDVDLAGFAARIGTVPVVLVVGTRDELAPWAAADVTLGRLVDAGLSARLVTFDGGH
                     RLDDATLAALAGSR"
     gene            complement(968..1648)
                     /locus_tag="VFN38_14285"
     CDS             complement(968..1648)
                     /locus_tag="VFN38_14285"
                     /inference="COORDINATES: protein motif:HMM:NF013630.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HET9012990.1"
                     /translation="MSVWGGAVTLVLAIIGLLLFLHRGDAEGSARIANRELELMLERG
                     EAIEWRAPIMARHWWHYFRVTHGVLAATNRRLLYVGVPPEEILPREPEPQLLEESSFP
                     YDRPIDIWRGRVFLGTLNGIIVRAPGQLRTFGVASSELARLNSVLSLMSQHQKAIRDT
                     DEMERQRALADAEAARQPIYHVVERGEALELIARDYNVTVEQLQEWNDLDSPQIRAGL
                     RLLVKPWT"
     gene            complement(1905..2114)
                     /locus_tag="VFN38_14290"
     CDS             complement(1905..2114)
                     /locus_tag="VFN38_14290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012991.1"
                     /translation="MEPTNRRIEGNFSQGWGMALFITLLVVGAFATAGFIHKKTYRHP
                     RDVTAPYRKDEKAKIGATTALVIPR"
     gene            complement(2158..>3299)
                     /locus_tag="VFN38_14295"
     CDS             complement(2158..>3299)
                     /locus_tag="VFN38_14295"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HET9012992.1"
                     /translation="AYTKPETHRTSIQFSSINADSSARAWGILLSYDARAALQRALAA
                     GPVRVRVVTRSRFSASTERTVIADIRGSEKPNERFVFSAHVQEPGANDNASGVGAAVE
                     MARVAASLVRAGTVVPRRSITFIWGNEIASTRRYLADGDRAESVRWGVSLDMVGEDTE
                     KTGGTFLIEKMPDPSAVWTRGDDHHTEWGGDALRVDQLTPHFFNDFVLRRCLDQAAVT
                     GWVVRTNPFEGGSDHVPFLDAKKPGLLFWHFTDVYYHTDNDRLPNVSPRELANVGVSA
                     LVSAFTLASADGATARALVAEVERAAIARLDTEAALSRAELSRGGDRGKETTILEAWT
                     DWYRRAIRTMAEIEVGGSSRETERAIAAADAAIQRAGRDRVAKLR"
BASE COUNT          530 a         1174 c         1098 g          497 t
ORIGIN      
        1 aggtccgcat tcgccagaca ccattcgagc acgttgtcat cgtccgcggc gtgtcggagc
       61 gtcgtggtcc cgcgagcgtg gccgcgacgc tctacgagga aacggccgag agcaggacga
      121 agcgtgacgc gctcgcgacc cagatccgaa gcatgcctgc cgacgagtgg gacacggggc
      181 gcccgaccaa acgcgaccgc cgcgagatcg agcggtttcg ccgccgctga ggcgtcgagc
      241 cgcggccgcg ccgacacgcg accgccgtcc gcctaacgag acccggcgag cgcggcgagg
      301 gtcgcgtcgt cgagccggtg gccaccatcg aacgtcacca gcctggccga caatccggcg
      361 tccaccagtc ggcctaacgt gacatccgcg gccgcccacg gcgcgagctc gtctcgcgtg
      421 ccgaccacga gcacgaccgg caccgtgccg attcgtgccg cgaaccccgc gaggtccaca
      481 tccggcggga aagacccggc ccacaggatg atctcgtccg cgcgtgcacg gccgcgatcg
      541 acccagcgga cgaccgtcgc cacgccctgc gagaagccga gcacgcgcag cctaacgccg
      601 ccggccgctc gccccggtcg cacgcgatcg acgagcgcgt cgaggtacgc cacctgatcg
      661 tcgatctcgc gctcgcgatc ctcccgcgtc atccacgtgg ccccgacgcg gggctcggcg
      721 tcgcccggct ttcgcgtcgc gtcgaggtag aatcgcgaga gcgcctccgg cgcgacaatg
      781 cgacgccacg gcgccgcgag cttctcgaac ggcgccacga aggttcccgc gagctgaccg
      841 tatccgtggc acacgaccca gagatcgcgg agcgtctcgt ccgccgccgc gtcggtgcct
      901 cccaccacgt agtatcgcgc cgttcgcgtg acggcgatgt gccgctcggt ccggcgaagg
      961 ccggtgctca cgtccacggc ttgaccagga gacgcagccc ggcacggatc tgcggcgagt
     1021 cgagatcgtt ccactcctgc agctgctcga ccgtcacatt gtagtctcgc gcgatcagct
     1081 cgagcgcttc gccgcgctcg acgacgtgat agatcggttg ccgcgccgct tccgcgtcgg
     1141 cgagtgcgcg ctgccgttcc atctcatccg tatcgcgaat cgccttctgg tgctggctca
     1201 tgagcgacag cacgctgttg agtcgcgcca gctcgctcga cgccacgccg aacgtccgca
     1261 actggccggg cgcacgaacg atgatcccgt tcagcgtccc gagaaacacg cggccgcgcc
     1321 agatgtcgat cgggcggtcg tacgggaacg atgactcctc gagcagctgc ggctccggct
     1381 cccgcgggag gatctcttcg ggcgggacac caacgtagag cagacgccgg ttcgtcgccg
     1441 cgagcacgcc atgcgtcacc cggaagtagt gccaccagtg gcgcgccatg attggcgcgc
     1501 gccactcgat ggcttcacca cgttcgagca tgagctcgag ctcgcggttc gcgatacgtg
     1561 ccgagccctc ggcgtcgcct cgatggagga agagcaggag gccgatgatc gcgagcacga
     1621 gcgtgaccgc cccgccccac accgacacgc gcagtgcgat ccaccatcgc cgccgtggcg
     1681 ggtgcgccgg ccgcggcctt cgagcggccg cttccatctc ctcggtccac ccggtcgatg
     1741 gggccgagaa cggaggctcg ctcagttggc tcaccgtgat gcgtgcattg cggcggatga
     1801 ggcgacgaac ttcagcaccc aacgtgaatc cgatcccacg tcgaggctag aaacacgagc
     1861 ggccccgcgc aagcggggcc gcgacgacat gacgaccgtt accgtcagcg cgggatgacc
     1921 agcgcggtcg tcgcgccaat cttcgccttc tcgtccttgc gatacggtgc agtgacatcg
     1981 cgcggatggc gatacgtctt cttgtgaatg aagccggcgg tggcgaaagc gcctaccacg
     2041 agcagggtga tgaagagggc catcccccag ccctgcgaaa aattgccctc gatccgtctg
     2101 ttcgtcggtt ccattgggtc gggaatacgg gtgaattgac gaccaatgta ctcgatccta
     2161 ccggagcttc gccactcggt cacggcccgc tcgctggatg gcggcgtcgg cggcggcaat
     2221 cgcccgttcg gtctccctgg acgacccgcc gacttcgatc tccgccatcg tccggatggc
     2281 tcggcgatac cagtcggtcc acgcctcgag aatcgtcgtc tccttcccgc ggtcgccacc
     2341 gcgcgacaac tctgctcgcg acagcgcggc ttccgtatcg aggcgggcga tcgcggcgcg
     2401 ttccacctcg gccacgagcg cccgcgccgt ggcgccgtct gcggacgcga gcgtgaaggc
     2461 ggagacgaga gcggacacac cgacgttcgc cagctcgcgc ggtgacacgt taggcagccg
     2521 gtcgttgtcg gtgtggtagt acacgtcggt gaaatgccag aacaggagcc ctggcttctt
     2581 ggcgtcgagg aacggaacgt ggtcgctgcc gccctcgaag gggttcgtgc ggacgaccca
     2641 gccggtcact gccgcctggt cgagacatcg gcggagcacg aagtcgttga agaagtgggg
     2701 ggtcagctga tcgacgcgca gcgcatcccc gccccactcg gtgtggtggt cgtcgccgcg
     2761 cgtccagacc gcggagggat cgggcatctt ctcgatgagg aaagtgccgc cggtcttctc
     2821 ggtgtcctca ccgaccatgt cgaggctcac gccccaccgc acggactcgg cgcggtcgcc
     2881 gtccgcgaga tagcggcgtg tcgacgcgat ctcgttgccc cagatgaacg tgatcgaccg
     2941 ccgcgggaca acggtcccgg cacgcacgag gctcgccgcc acgcgcgcca tctccaccgc
     3001 cgcgccgacg cccgatgcgt tgtcgttcgc gccgggctcc tgcacgtgag cgctgaacac
     3061 gaaccgctcg ttaggcttct cgctgccgcg gatgtcggcg atgaccgtgc gctccgtgga
     3121 cgccgaaaag cgcgagcggg tgacgacgcg gacgcgcacg ggccccgccg cgagcgcgcg
     3181 ctgcagcgcc gcgcgcgcgt cgtacgacag caggattccc catgccctcg cgctcgagtc
     3241 ggcgttgatc gacgagaact ggatcgacgt gcgatgcgtc tcgggcttcg tgtacgcag
//
LOCUS       DASSYW010000901         3425 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_708409, whole genome shotgun sequence.
ACCESSION   DASSYW010000901 DASSYW010000000
VERSION     DASSYW010000901.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3425)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3425)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3425
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_708409"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1016..2659
                     /locus_tag="VFN38_14300"
     CDS             1016..2659
                     /locus_tag="VFN38_14300"
                     /inference="COORDINATES: protein motif:HMM:NF017541.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TROVE domain-containing protein"
                     /protein_id="HET9012993.1"
                     /translation="MFDFTQHVSTRLRRIATPQDHPIPGSAQLPNSAGGFTWALDRWA
                     RLDRFLVLGTEGGTYYVGERPLTRESAAAAMECVAEDGARVVRRVVEISASGRAPKND
                     PALFVLAMAAGAGDDATRAAALAALPAVARTGTHLFHWMRFVKAFRGWGRGVRTAVGR
                     WYTAKSPNDLAYQLLKYQARDGWSHRDALRLAHPKATSYDHDVLFRFATRGWSAVAGS
                     NALRTDVGGRLEAAQAVREMSPADAARVIRVYRLTREMVPTELLVHPVVWEALLESMP
                     LGALVRNLGVMSRVGLLVTGSAASRTVVARLGDREGIRRARLHPLALLAALKTYARGR
                     GVKGEGAWAPVAQVVDALDGAFYLAFENAPATGRRIMLALDVSGSMMSPVHGMSFTSC
                     REASAAMALVTAATEPEHRLVAFTRGGYRSMWPGLGSGLAPLPISPRQRLDDVVKSIE
                     GLPFGGTDCALPMVEALKHRWAVDVFVVFTDNETWAGDIHPAQALRAYRERTGIAAKL
                     VVVAMASNGFTIADPDDAGMLDVVGFDAATPRVIGDFAS"
     gene            2751..3056
                     /locus_tag="VFN38_14305"
     CDS             2751..3056
                     /locus_tag="VFN38_14305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9012994.1"
                     /translation="MNRLSSYFEEAPGTLGDYFVVAGEFGAACVSKETARKIEAVLDR
                     RWVPRWLVFRDRVGSRIRVRTRGIRSIVESTAAQRAGDRRLDRARRHEEENDGRPWD"
     gene            3169..>3425
                     /locus_tag="VFN38_14310"
     CDS             3169..>3425
                     /locus_tag="VFN38_14310"
                     /inference="COORDINATES: protein motif:HMM:NF013319.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008452 - RNA ligase activity [Evidence
                     IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RtcB family protein"
                     /protein_id="HET9012995.1"
                     /translation="MKIFGQHDQNTIAQLQNVRERAVDVALMADGHVGYVMPIGGVAA
                     YREQVSVVGVGFDIACGNAAIRTDLTLASLGRDPVEIQRTLT"
BASE COUNT          510 a         1210 c         1238 g          467 t
ORIGIN      
        1 tcacgagtcg tttcgcagcg cgcgtgatgc gcgagcggag cgatccaccc cgaagcgcac
       61 tgcgctccgg gcgaccatcg gcggcgcgat tttgcgttcc ggaactccac acacctcagc
      121 cacgacactc gattcgatga ccgcgcacac cactctccca cgcgaccacg ctcggcggca
      181 gggctccggc ccgcacgccg cgagctggag cgcgctcgcc ggcgcgcgcg gggagaacgt
      241 gtgcccggtg gcgattcgag tcgccggaac ggatcgcggc gcgatcgtcg gcgtccaggt
      301 gcagcgagga cgcggcgacg agatgacgtt cgcggcgagg atcggtagga gcgggacgct
      361 cgaggcgggc tatcgccagc cgcgagtgac gaggaacggt gcaggagcca ggtggggagg
      421 gcgtacgccg tagcgtacga cgacccgcca cggatccggg agcggtacca cacgccccac
      481 ctgcgccgag tgccaggtgg ggcgttttgc gtccacacgg ggcggcggag gaacgccatg
      541 caacgcaggg aaggacgggc gcttcgcgcg ccggccgctg tttgacaagt gatggtctgg
      601 ggaaggaaag cagcacacgc aacacggcag tagcagcacg accgtggtcc gtcgtcggac
      661 ggcgaggcac ggtgcccggg tgggaagaca cgcgactcct accgcccgcg cgcaccgctg
      721 tcgccgtcgc gccggcggcg ggccagctgt cgggctcctc attcaatcga cgcgtcggca
      781 ggcggcctct ggagcgctcg cggtgcatcc accaccccgc tccagaggcg cgaccggcgc
      841 cagtcctctc acactctcac ctcgagcggg tcgccgctcc tcggttatcg ctcacaatcg
      901 aactccctgg aacaagcgaa ccaggggccg agggcaccct tcatccgctc gacctgctcc
      961 accgttccag cagtctcacc gttccaccca ccactcgacc acaggaggcc gagccatgtt
     1021 cgacttcacg cagcacgtct cgactcgcct ccggcgcatc gccacgccgc aggaccaccc
     1081 gattccgggc agcgcgcagc tgcccaactc ggcgggcggg ttcacctggg ccctcgaccg
     1141 ctgggcgcgc ctcgaccgct tcctcgtcct cggcaccgag gggggcacgt attacgtcgg
     1201 cgagcggccg ctgacccggg agagcgccgc ggccgccatg gagtgcgtcg ccgaggacgg
     1261 cgcgcgcgtc gtgcggcgcg tcgtcgagat cagtgcgagc ggccgggcgc cgaagaacga
     1321 tcccgcgctc ttcgtgctgg cgatggcggc cggtgccggc gacgacgcga cgcgcgccgc
     1381 cgcgctcgcc gccctccccg cggtggcgcg gaccggtacg cacctcttcc actggatgcg
     1441 cttcgtgaag gcgttccgcg gctgggggcg cggcgtgcgc accgcggtcg gccggtggta
     1501 cacggcgaag tcgcccaacg acctggcgta ccagctcctg aagtaccagg cgcgggacgg
     1561 ctggtcgcac cgcgacgcgc tgcggctcgc gcacccgaag gcgacgtcgt acgaccacga
     1621 cgtgctcttc cgcttcgcga cgcgagggtg gagcgccgtc gccgggagca acgcgctgcg
     1681 caccgacgtc gggggccggc tcgaggcggc gcaggccgtc cgcgagatga gcccggccga
     1741 cgcggcgcgc gtcatccgcg tctacaggct gacgcgggag atggtcccca ccgagctgct
     1801 cgtgcatccc gtggtctggg aagcgctgct cgagtcgatg ccgctcggcg cgctggtccg
     1861 gaacctcggc gtgatgagcc gcgtcgggct gctcgtcacc ggctcggcgg cgtcgcgcac
     1921 ggtcgtcgcc cgcctgggcg accgcgaggg gatccgccgg gcgcgcctgc acccgctggc
     1981 gctgctcgcc gcgctgaaga cgtacgcccg ggggcgcggc gtgaaggggg agggagcctg
     2041 ggcgccggtg gcgcaggtgg tggacgcgct cgacggcgcc ttctacctcg ccttcgagaa
     2101 cgcgccggcg acgggcaggc ggatcatgct cgccctcgac gtctcgggct cgatgatgtc
     2161 ccccgtgcac gggatgagct tcacctcctg ccgggaggcg tcggcggcga tggcgctcgt
     2221 caccgccgcg acggagccgg agcatcgcct cgtcgccttc acgcgcggcg gctaccggtc
     2281 gatgtggccg ggactcggca gcggactcgc tccgctcccg atctccccgc ggcagcggct
     2341 ggacgacgtc gtgaagtcga tcgagggcct ccccttcggt ggcacggact gcgcgctgcc
     2401 gatggtcgag gcgctgaagc accgctgggc ggtggacgtc ttcgtcgtct tcaccgacaa
     2461 cgagacgtgg gcgggggaca tccatcccgc gcaggcgctc cgcgcgtatc gggagcggac
     2521 ggggatcgcg gcgaagctgg tcgtcgtcgc gatggcgtcg aacgggttca cgatcgccga
     2581 ccccgacgac gccggcatgc tcgacgtcgt cggcttcgac gcggcgacgc cgcgcgtgat
     2641 cggcgacttc gcgtcctgag tggcgggctg gatgcccgcc actccggggg cggagcatcc
     2701 agtaccgggc cggacggtct cacgtccggt ccaccaacac tcactcaatc atgaaccgac
     2761 tgtccagcta tttcgaggaa gcgccgggaa cgctcggcga ctacttcgtc gtggctggcg
     2821 agttcggcgc cgcatgcgtc agcaaggaga ccgctcggaa gatcgaggcg gtgctcgacc
     2881 ggcggtgggt gccgaggtgg ctcgtctttc gcgaccgcgt cggttcccgc atccgggtgc
     2941 gcacgcgagg catccgttcg atcgtggagt ccaccgccgc ccagcgggcg ggcgacagac
     3001 gcctcgaccg ggctcgccgg cacgaggagg agaacgacgg ccgcccgtgg gactagggcg
     3061 gccgatcatc cccggaccat cgctcgtcgc ggcggaagca cgcaagcaaa aagactcggc
     3121 ggaatcgcga gtcacgatca ggaatcacac atcacgaagc gcggcaacat gaagatcttc
     3181 ggacagcacg accagaacac gatcgcccag ctccagaacg tccgcgagcg ggcggtggac
     3241 gtggccctga tggcggacgg ccacgtgggc tacgtgatgc cgatcggcgg cgtggcggcc
     3301 tatcgcgagc aggtctcggt ggtgggtgtc ggcttcgaca tcgcctgcgg aaacgccgcc
     3361 attcgcaccg acctcaccct cgcgtcgctc ggccgcgatc cggtggagat ccagcgcacg
     3421 ctgac
//
LOCUS       DASSYW010000902         2769 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1703855, whole genome shotgun sequence.
ACCESSION   DASSYW010000902 DASSYW010000000
VERSION     DASSYW010000902.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2769)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2769)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2769
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1703855"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            104..949
                     /locus_tag="VFN38_14315"
     CDS             104..949
                     /locus_tag="VFN38_14315"
                     /EC_number="2.3.1.117"
                     /inference="COORDINATES: protein motif:HMM:NF008808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase"
                     /protein_id="HET9012996.1"
                     /translation="MTTLADEVGSLVAAGRDADRAAARDVFARLRAALSAGEVRAAEP
                     DVSAPTGWRVNAWVKQGILLGFRFGDVADVSADHGRWPFFDKDTLPLKRLPPGAGVRI
                     VPGGSSVRDGAYLGRGVIAMPPMYVNIGAYVGDESLVDSHALVGSCAQIGERVHLSAA
                     AQIGGVLEPVNASPVVIEDDVLVGGNCGVYEGTVVRAKAVLAAGVVLTRGTPVFDLVK
                     ERVYRGDADRPLEIPEGAVVVPGARQVNAGWGAGQGVSLQTPVIVKYRDERTDLATAL
                     EGWLR"
     gene            975..2261
                     /gene="aroA"
                     /locus_tag="VFN38_14320"
     CDS             975..2261
                     /gene="aroA"
                     /locus_tag="VFN38_14320"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: protein motif:HMM:NF012497.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003866 - 3-phosphoshikimate
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HET9012997.1"
                     /translation="MAPLTRGALRVAGELQVPGDKSISHRALICSALAEGTSRIRGIL
                     PSADVHSTAGVLRALGVPVPELWPTMAIVGAGRRSLRAPAADLDCGNSGTTARLMSGV
                     VAGAGLTARFVGDASLSRRPMRRVARPLVQMGARVELPEHGGLPMTVTGAPLHDVEWV
                     SDTPSAQVKSCVLLAALCAGVEATVREPSRSRDHTERMLASMGAEVWVNDDAVLLFAE
                     QTLAPLDVSVPGDPSSAAFFAALASLATEGDLLATRVGVNETRTGFFAALREMGGAIE
                     LENAVREGGEHVADLRIASGRALAGITVSGDVIPTLIDELPLLACVAAYADGETRVTG
                     AAELRVKESDRIAAVVQNLRALGADADELPDGYVVRGTRPRLRGTVTTHGDHRLAMAF
                     GVLATLPGNEIAIDDRACVAVSYPGFWDDLRRVTST"
     gene            2258..>2769
                     /gene="cmk"
                     /locus_tag="VFN38_14325"
     CDS             2258..>2769
                     /gene="cmk"
                     /locus_tag="VFN38_14325"
                     /EC_number="2.7.4.25"
                     /inference="COORDINATES: protein motif:HMM:TIGR00017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004127 - cytidylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HET9012998.1"
                     /translation="MSARIVVAIDGPAASGKSSTSQWVAEKLGFLHVDSGSLYRALTA
                     ALLRQGAPPERWTSSVMLAQGARVSLRAEATSFATLIDGVPAEEEIRGSLVTSHVSLV
                     ARNPEVRQWVNARVREAASEHDVVVDGRDMGTAVFPDATLKIFLIADPWERARRRLNQ
                     RMERPPTEEE"
BASE COUNT          339 a          987 c         1057 g          386 t
ORIGIN      
        1 cctatcgtct gccgctcgtc ccgccgcggc cggcgtcgcg cgagcgcatt ctcgcggtgc
       61 tcgccgatct ccagctcgtg tcggccgccg gggcggcgcg gccgtgacga cgctcgccga
      121 cgaggtcgga tcgctcgtcg ccgccggcag ggacgcggac cgcgccgcgg cgcgggacgt
      181 gttcgcgcgg ctgcgcgccg cgctctcggc cggcgaggtc cgcgcggccg aacccgacgt
      241 gtccgcgccg acgggctggc gcgtcaacgc gtgggtgaag cagggcatcc tgctcgggtt
      301 ccgcttcggc gacgtcgcgg acgtgtcggc ggaccacggc aggtggccgt tcttcgacaa
      361 ggacacgctg ccgctgaagc gcctgccgcc cggcgcgggc gtccgcatcg tgcccggcgg
      421 atcgtcggtg cgcgacggcg cgtatctcgg ccgcggcgtg atcgcgatgc cgccgatgta
      481 cgtcaacatc ggcgcttacg tcggcgacga atcgctcgtg gactcccacg cgctcgtcgg
      541 atcgtgcgcg cagatcggcg agcgcgtgca cctgagcgcg gcggcgcaga tcggcggcgt
      601 gctcgaaccg gtgaacgcgt cgccggtggt gatcgaggac gacgtgctgg tgggcggcaa
      661 ctgcggggtg tacgagggca ccgtcgtgcg cgcgaaggcg gtgctcgccg cgggcgtcgt
      721 gctcacgcgc ggcaccccgg tgttcgatct cgtgaaggaa cgcgtctatc gcggcgacgc
      781 cgaccgcccc ctcgagattc ccgagggcgc cgtggtggtg cccggcgcgc gtcaggtgaa
      841 cgcgggctgg ggcgccgggc agggcgtgtc gctccagacg ccggtgatcg tgaagtatcg
      901 cgacgagcgc accgatctcg cgactgcgtt ggaaggctgg ctgcgatgag cagcagccag
      961 cgtcacgcga ccgggtggct ccgctgaccc gcggcgcgtt gcgcgtcgcc ggcgagctcc
     1021 aggtcccggg cgacaagtcc atctcgcatc gcgccctcat ctgcagcgcg cttgccgagg
     1081 gtacgtcgcg catccgcggc atcctcccct ccgccgacgt gcactccacc gcgggcgtgc
     1141 tgcgcgcgct cggcgtgccg gtgcccgagc tgtggcccac gatggcgatc gtcggcgccg
     1201 gccggcgatc gctccgcgca ccggcggcgg acctggactg cggcaacagc ggcacgacgg
     1261 cgcggctcat gtcgggcgtc gtggccggcg cgggactcac ggcgcgcttc gtgggtgacg
     1321 cgagcctcag ccgccggccc atgcggcgcg tcgcgcgtcc gctcgtgcag atgggcgccc
     1381 gcgtggagct ccccgagcat ggcggcctgc cgatgacggt cacgggcgca ccgctgcacg
     1441 acgtcgaatg ggtcagcgac accccgagcg cgcaggtgaa gagctgcgtg ctgctggcgg
     1501 cgctgtgcgc cggcgtggaa gcgacggtgc gcgagccgag ccgctcgcgc gaccacaccg
     1561 agcgcatgct ggcctcgatg ggcgccgagg tctgggtcaa cgatgatgcc gtgctgctct
     1621 tcgccgaaca gacgctcgcg ccgctggacg tcagcgtgcc gggcgacccg tcgtccgcgg
     1681 cgttcttcgc cgcgctggcc tcgctcgcga cggagggcga cctgctggcg acccgcgtcg
     1741 gcgtgaacga gacgcgcacc ggcttcttcg cggcgctgcg cgagatgggt ggcgccatcg
     1801 agctggagaa cgcggtgcgc gaaggcgggg agcacgtggc cgacctgcga atcgcgagcg
     1861 gccgcgcgct cgcgggcatc accgtgagcg gcgacgtgat tcccacgctg atcgacgagc
     1921 tgccgctgct cgcctgcgtc gcggcgtatg cggacggtga gacgcgcgtc acgggcgcgg
     1981 ccgagctgcg cgtgaaggag agcgaccgca ttgccgccgt ggtgcagaat ctccgtgcgc
     2041 tgggcgccga cgccgacgag ctgccggacg gctacgtcgt gcgcggcacc cgtccgcgcc
     2101 tccgcggcac ggtgacgacc cacggcgacc accggctggc gatggcgttc ggcgtgctgg
     2161 cgacgctccc gggcaacgag atcgcgatcg acgaccgcgc ctgcgtcgcc gtctcctatc
     2221 cgggcttctg ggacgacctg cgccgggtga cctccacatg agcgcgcgca tcgtcgtcgc
     2281 gatcgacgga ccggcggcgt cgggcaagtc gtccacctcg caatgggtgg ccgagaagct
     2341 cggcttcctg cacgtggatt ccggctcgct ctatcgtgcc ctcacggcgg cgctcctccg
     2401 gcagggagcg ccgcccgagc gctggacctc gtccgtgatg ctggcgcagg gcgcgcgcgt
     2461 ctccctccgc gccgaggcca cctcgttcgc gaccctcatc gacggcgtgc cggccgagga
     2521 ggagatccgc ggcagcctgg tcacgtcgca cgtgtcgctc gtggcgcgca accccgaggt
     2581 gcggcagtgg gtcaacgccc gggtccgcga ggcggccagc gagcacgacg tggtggtgga
     2641 cggccgggac atgggcacgg cggtcttccc cgacgcgacg ctcaagatct tcctcatcgc
     2701 cgacccgtgg gagcgggccc gtcggcggct gaaccagcgg atggagcggc cgcccaccga
     2761 ggaagagat
//
LOCUS       DASSYW010000903         2731 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_248277, whole genome shotgun sequence.
ACCESSION   DASSYW010000903 DASSYW010000000
VERSION     DASSYW010000903.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2731)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2731)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2731
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_248277"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2324)
                     /locus_tag="VFN38_14330"
     CDS             complement(<1..2324)
                     /locus_tag="VFN38_14330"
                     /inference="COORDINATES: protein motif:HMM:NF024703.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016818 - hydrolase activity, acting on
                     acid anhydrides, in phosphorus-containing anhydrides
                     [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helicase C-terminal domain-containing protein"
                     /protein_id="HET9012999.1"
                     /translation="MPRPAPKPPSTSRLAPAAAAAVRAAIRLAGGREVCFVSTLDGDG
                     VVQTARVVARGDVASVLALPGFARRGEMLLHNHPSGLLEPSGADYDVAARMHDDGIGF
                     GIVDNDARALYVVVEVPRADEQTRLDPVAVAHDLGPDGPIARQHARYEDRESQRAMAA
                     TIATVYNEGGVGLLEAGTGVGKSLGYLVPALRWAAANGERTIVSTNTINLQEQLVGKD
                     LPFLAKALGDQKVRFALLKGWRNYLCKARLEQASGGAAQLFEDGMAAELATLAAWAER
                     TTDGSLADLPTPPRPEVWDEVSAEGDICTRMKCAHFDQCFVFKARRAAAQADVIVVNH
                     HLLLADLAVRRAAQNWDDAAVLPAYGRLVVDEGHHLEDAAATHLGSTVTRRGLQRLVN
                     RLDRRGKGLLPALATRLSASSDLLSTASLDLLEARLAPSVHGLREKSALLFDLLDTFI
                     HEEGQPVVRLSQSFATHPIWAAGLTLALEDTLGEIELLGEGLRLVRERIEGSTTLDEQ
                     LTPLLNEMRSVTKRLQTAGDGLRRALAPPADDDSVRWVEVRGRERSVAVSAVPLDLAP
                     ILREDLFKRLDSVIVTSATLTASRGDVASDARRFDFLAARLGLDDPELAPTTAVFPSP
                     FSYDSHSLLAIPSDIPAPNVDADGHRNAITRIVLDVAESSDGGLFVLFTSHREVRQLA
                     SELRARGVERRWPLLVHGDEGRDALLARFRDSGQAILLGTASFWEGVDVPGDALRGLV
                     IAKLPFRVPTEPVTAAQCEAIVARGGDAFAEYMLP"
     gene            complement(2369..>2731)
                     /locus_tag="VFN38_14335"
     CDS             complement(2369..>2731)
                     /locus_tag="VFN38_14335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013000.1"
                     /translation="VELSTELTFTTVLAKAPMRDSAAVHASPGGVAVAGLLNQTAPCF
                     GIASSATQEGERVVLRLTATETRQTCATFAAGAFDYGVVAKGLAPGVYDVDVVHRVAF
                     KDGRTVEEKVGSQRVRVP"
BASE COUNT          373 a         1001 c          996 g          361 t
ORIGIN      
        1 ggcagcatgt attcggcgaa cgcgtcgccc ccccgtgcga cgatcgcctc gcactgcgca
       61 gccgtcaccg gctcggtcgg gacgcggaag ggtagcttgg cgatcacgag cccccgcagc
      121 gcgtcgccgg gcacgtccac cccttcccag aacgacgcgg tgccgaggag gatcgcctgc
      181 cccgaatcgc gaaagcgcgc caggagggcg tcgcggccct cgtcgccgtg cacgagcagc
      241 ggccaccgcc gctcgacgcc gcgcgcgcgc agctcgctcg cgagctggcg cacctcgcga
      301 tggctcgtga acagcacgaa caggccgccg tcggacgatt cggccacgtc cagcacgatg
      361 cgggtgatgg cgttgcggtg cccgtcggcg tccacgttgg gggcggggat gtcgctcggg
      421 atggcgagca gcgaatgcga gtcgtacgag aagggcgacg ggaacaccgc cgtcgtgggt
      481 gcgagctcgg gatcgtcgag cccgaggcgg gccgcgagga agtcgaaccg gcgggcatcg
      541 gaggcgacgt cgccgcgcga ggcggtgagc gtcgcgctgg tgacgatgac gctgtcgagc
      601 cgcttgaaca ggtcttcgcg gaggatcggc gcgaggtcga ggggcacggc ggacaccgcg
      661 acgctccgct cccgtccgcg cacctccacc cagcgcacgc tgtcgtcgtc ggcgggcggg
      721 gccagcgcgc gacgcaggcc gtcgcccgcc gtctgcagcc gcttcgtcac ggagcgcatc
      781 tcgttcagca gcggcgtgag ctgctcgtcc agcgtcgtgc ttccctcgat ccgctcgcgc
      841 accaggcgca atccctcccc cagcagctcg atctcgccga gcgtgtcctc gagcgcgagc
      901 gtgagcccgg ccgcccagat gggatgcgtc gcgaagctct gcgacagccg caccacgggc
      961 tgcccctcct cgtgaatgaa cgtgtcgagc aggtcgaaca ggagcgcgct cttctcgcgc
     1021 agcccgtgca ccgacggggc gaggcgcgcc tccaggagat cgaggctcgc ggtgctcagc
     1081 aggtcgctgc tcgccgacag ccgggtggcc agcgcgggga gcagcccctt gccgcggcgg
     1141 tcgagccggt tcacgaggcg ctggagcccg cggcgcgtca ccgtcgagcc gaggtgcgtc
     1201 gccgccgcat cctccagatg atgcccctcg tccaccacga ggcgcccgta ggcggggagc
     1261 accgccgcat cgtcccagtt ctgcgcggcg cgccggaccg cgaggtcggc gaggaggaga
     1321 tggtggttca cgacgatcac gtcggcctgc gccgccgcgc gccgcgcctt gaacacgaag
     1381 cactggtcga agtgcgcgca cttcatccgc gtgcagatgt ccccctcggc cgacacctcg
     1441 tcccacacct cggggcgcgg cggagtcggg aggtcggcga gcgagccgtc ggtggtgcgc
     1501 tcggcccacg ccgcgagcgt cgccagctcg gcggccatgc cgtcctcgaa cagctgcgcg
     1561 gcgccgccgc tggcctgctc gagccgcgcc ttgcagaggt agttgcgcca tcccttgagg
     1621 agcgcgaacc gcaccttctg gtcgccgagc gccttcgcga gaaagggaag gtccttgccg
     1681 acgagctgct cctgcaggtt gatggtgttc gtggagacga tggtgcgctc cccgttcgcg
     1741 gcggcccagc gcagcgcggg caccaggtag cccagcgact tgccgacccc cgtgcccgcc
     1801 tcgagcaggc cgaccccgcc ctcgttgtag acggtggcga tggtcgcggc catcgcgcgc
     1861 tggctttcgc gatcctcgta gcgcgcgtgc tggcgggcga tcgggccgtc ggggcccagg
     1921 tcgtgcgcca cggccaccgg atcgaggcgc gtctgctcgt cggcgcgcgg gacctcgacc
     1981 accacgtaga gcgcgcgggc atcgttgtcc acgatgccga agccgatgcc gtcgtcgtgc
     2041 atccgcgccg cgacgtcgta gtcggctccc gacggctcca ggaggccgga cgggtggttg
     2101 tggagcagca tctcgccccg ccgcgcgaag ccgggcagcg cgagaacgct cgccacgtcg
     2161 ccgcgcgcca cgacccgcgc cgtctgcacc accccgtcgc cgtccagggt gctgacgaag
     2221 cacacctcgc gtccgccggc gaggcggatg gccgcgcgca ccgccgccgc ggcggccggc
     2281 gcgagtctgg aggtggaggg gggcttgggc gctgggcggg gcacccctga agataagccg
     2341 aaacagggcc gcgggtcagc cgccccgact acgggacccg gacccgctgc gacccgacct
     2401 tctcctccac ggtgcgtccg tccttgaacg ccacccggtg gacaacgtcc acgtcgtaga
     2461 cgcccggcgc gaggcccttc gccaccacgc cgtagtcgaa ggcgccggcc gcgaaggtgg
     2521 cgcaggtctg cctggtctcc gtggccgtga ggcgcagcac gacgcgctcg ccctcctgcg
     2581 tggccgagga cgcgattccg aagcagggcg cggtctggtt gagcagcccc gccacggcca
     2641 cgccgcccgg cgacgcgtgc accgccgcac tgtcgcgcat gggtgccttc gcgagcaccg
     2701 tggtgaaggt cagctcggtg gagagctcca c
//
LOCUS       DASSYW010000904         2769 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1058974, whole genome shotgun sequence.
ACCESSION   DASSYW010000904 DASSYW010000000
VERSION     DASSYW010000904.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2769)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2769)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2769
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1058974"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..518)
                     /locus_tag="VFN38_14340"
     CDS             complement(<1..518)
                     /locus_tag="VFN38_14340"
                     /inference="COORDINATES: protein motif:HMM:NF014517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamide-nucleotide amidohydrolase family
                     protein"
                     /protein_id="HET9013001.1"
                     /translation="MSDAAQTIQHLAERLGAGLRAQHLVLTTAESCTAGGLGYAVTLV
                     PGSSAWYDRGFITYSNESKMQMLGVSAAYLRDFGAVSEPVARAMAIGALSHSAAQVAV
                     AVTGIAGPDGGTPDKPVGTVCFAWAIRRDPSTAPWVKTATHRFEGDRAAVRTGSIITS
                     LQTLVGLLKQRQ"
     gene            complement(515..1039)
                     /locus_tag="VFN38_14345"
     CDS             complement(515..1039)
                     /locus_tag="VFN38_14345"
                     /inference="COORDINATES: protein motif:HMM:NF016489.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase A"
                     /protein_id="HET9013002.1"
                     /translation="MTPAPIASPAAPRVPLEPSWRLMMSHPAHQLSFGFGSGLVRPAP
                     GTWGTLFAWLVFVVIDPWLSDPAWAGVIVATFLLGAAAAQRTGKALGRPDHGSIVIDE
                     IVAFWLVLWLLPAGVFTQAVAFVGFRVFDILKPPPIRAVDRRYKNGLGVMLDDLLAAF
                     YTLLAAAVLTRLFA"
     gene            complement(1036..2016)
                     /gene="thiL"
                     /locus_tag="VFN38_14350"
     CDS             complement(1036..2016)
                     /gene="thiL"
                     /locus_tag="VFN38_14350"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: protein motif:HMM:TIGR01379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009030 - thiamine-phosphate kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HET9013003.1"
                     /translation="MGAPLGEFDLIARYFTRPVPAGRADIPLAVGDDCALLQPATGEQ
                     WAVSTDTLVEGTHFLPTVDPAALGHKALAVNLSDLAACGAEPRCFFLALALPAIDEAW
                     LHAFSTGMFALADAHGCVLAGGDTTRSPRGVVITITVMGAVPRGQALLRSGARPGDEL
                     WVSGTLGDAAFGLAVRLGDSKAADDAVKGIDRLERPRPQIALGRALRGVASGAIDVSD
                     GLLGDLGHIIERSDVGARVEWNRVPRSPELRRQPEADQRRWALAGGDDYELLFTAPLG
                     HRADVERAAREAGVAVSRIGEITSTGRLELVDADGRAMDTEARAFDHFRP"
     gene            complement(2022..2507)
                     /gene="nusB"
                     /locus_tag="VFN38_14355"
     CDS             complement(2022..2507)
                     /gene="nusB"
                     /locus_tag="VFN38_14355"
                     /inference="COORDINATES: protein motif:HMM:TIGR01951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HET9013004.1"
                     /translation="MQPKESGSSRGGGRSARRRARELALQGLYQWLVGGQDAAAIEVH
                     LIETEGREGVDELGKRADLSHYRELLHGTIDGAEVLRREFAPYLDRNVEALSPIEHGI
                     LLIGTYEMKQRPEIPYRVVINEAVELAKSFGGTDGFKYVNGVLDKVAGQLRPAEVAAR
                     G"
     gene            complement(2512..>2769)
                     /locus_tag="VFN38_14360"
     CDS             complement(2512..>2769)
                     /locus_tag="VFN38_14360"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: protein motif:HMM:NF013081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009349 - riboflavin synthase complex
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HET9013005.1"
                     /translation="CVIRGETYHFELVAEESARGVARVTLDYGVPVANAILTTDSDEQ
                     AQARVAEKGRDAARVAVEMANLMLALDEDGEGDAAEADQDE"
BASE COUNT          421 a         1013 c          939 g          396 t
ORIGIN      
        1 tcctgtcgct gcttcagcag cccgacgagg gtctgcaggc tcgtgatgat ggagcccgtg
       61 cgtacggcgg cgcggtcacc ctcgaaacga tgcgtcgctg tcttcaccca gggtgcggtc
      121 gagggatcac gccggatcgc ccaggcgaag cacaccgtgc ccaccggctt gtccggagtg
      181 ccgccgtcgg gtcctgcgat gccggtcacg gccaccgcga cctgtgccgc actgtgcgac
      241 agcgcgccga tcgccatcgc gcgcgccacc ggttcgctga ccgcaccgaa gtcacgcagg
      301 taggcggccg acacgccgag catctgcatc ttcgattcgt tcgaatacgt gatgaagccg
      361 cggtcgtacc acgcgctcga tcccggcacg agcgtcaccg cgtagccgag gccgccggcc
      421 gtacaggact cggcggtggt caacaccagg tgctgcgcgc gcagtcccgc gcccagccgc
      481 tcggcaaggt gctggatggt ctgggccgcg tcgctcatgc gaacaggcgg gtcaggacgg
      541 ccgcggcgag cagcgtgtag aacgcggcga gcaggtcatc gagcatcacg ccgaggccgt
      601 tcttgtagcg ccggtccacg gcccggatcg gaggcggctt caggatgtcg aacacgcgga
      661 agccgacgaa cgcaaccgcc tgcgtgaaga cccctgccgg cagcagccac agcacaagcc
      721 agaacgcgac gatctcgtcg atgacgatcg agccgtgatc gggccggccg agcgccttgc
      781 ccgtccgttg cgcggccgcc gcgccgagga gaaaggtcgc cacgatgacg ccggcccacg
      841 ccgggtcgga cagccacgga tcgatcacga cgaacacgag ccacgcgaac agggtgcccc
      901 aggtgccggg cgccggtcgt accagcccgc tgccgaaccc gaaggaaagc tgatgtgccg
      961 ggtgcgacat catcaggcgc cacgacggct ccagcggcac ccgaggtgcc gccgggctgg
     1021 cgatcggtgc gggggtcatg gacggaagtg atcgaaggca cgcgcctcag tgtccatcgc
     1081 ccgtccgtcg gcgtccacca gttcgagacg cccggtcgac gtgatttctc cgatgcggga
     1141 aaccgctaca cccgcctccc tggccgcgcg ctcgacatcc gcccggtggc cgagtggcgc
     1201 cgtgaacagc agctcgtagt cgtcgccgcc tgcaagcgcc cagcggcgct ggtcggcctc
     1261 gggctgtcgg cgcagttccg gcgaccgcgg aacccggttc cactcgacac gcgcaccgac
     1321 gtccgagcgt tcgatgatgt gaccgaggtc gccgagcagg ccgtccgaga cgtcgatggc
     1381 gccgctcgcc acgccccgca gcgcccgccc cagcgcgatc tgcggccggg gtcgctccag
     1441 gcggtcgatg cccttcaccg cgtcatcggc cgccttcgaa tcgccgaggc gcaccgccag
     1501 cccgaatgcg gcgtccccca gcgtccccga gacccagagc tcgtcgcccg gccgcgcgcc
     1561 ggagcgcagc agcgcctggc cgcgcggcac ggcccccatc acggtgatcg tgatgaccac
     1621 gccccgcggc gagcgcgtgg tgtcgccgcc cgccagcacg caaccgtgcg catcggcgag
     1681 cgcgaacatc cccgtggaaa aggcgtgcag ccacgcctcg tcgatcgccg gcaacgcgag
     1741 cgcgagaaag aagcagcgcg gctcggcgcc gcaggccgcg agatcggaga gattgaccgc
     1801 cagcgccttg tggccgagcg cggccggatc gaccgtcggc aggaagtgcg tgccctcgac
     1861 cagcgtgtcc gtcgagaccg cccattgttc tccggtcgcc ggctgcagca gtgcgcagtc
     1921 gtcgccgacg gcgagcggaa tgtccgcgcg cccggcaggc acgggacgcg tgaagtaccg
     1981 cgcgatgaga tcgaattcgc cgagcggcgc gcccatcgcg gttacccgcg cgcggccacc
     2041 tcggccgggc gcaactgtcc ggcgaccttg tcgagcacgc cgttgacgta cttgaagccg
     2101 tcggtgccgc cgaaactctt ggccagttcg actgcctcgt tgatgacgac ccggtacggg
     2161 atctcgggtc gctgcttcat ctcgtaggtg ccgatcagca ggatgccgtg ctcgatcggc
     2221 gacagcgctt cgacgttgcg gtcgaggtac ggcgcgaact cacgccgcag tacctcggcg
     2281 ccgtcgatcg tgccatgcag cagctcgcgg taatggctga gatcggccct cttgccgagt
     2341 tcgtcgacgc cttctcgccc ctcggtctcg atcaggtgga cttcgatcgc ggccgcgtcc
     2401 tggccgccga ccagccactg gtacaggccc tgcagcgcga gctcgcgtgc gcgccggcgc
     2461 gcactgcggc cgccgcctct cgatgaaccg gattccttcg gctgcaaggg tctactcgtc
     2521 ctggtccgct tcggcggcat cgccctcgcc gtcctcgtcg agggcgagca tcaggttggc
     2581 catttccacc gcgacgcgcg ccgcgtcgcg gcccttctcc gccacgcgcg cctgcgcctg
     2641 ctcgtccgag tcggtcgtca ggatcgcgtt cgcaacgggc actccatagt cgagcgtgac
     2701 gcgtgccacg ccgcgtgccg actcctccgc gacgagctcg aagtgatacg tctcgccgcg
     2761 gatgacgca
//
LOCUS       DASSYW010000905         2321 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1538005, whole genome shotgun sequence.
ACCESSION   DASSYW010000905 DASSYW010000000
VERSION     DASSYW010000905.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2321)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2321)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2321
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1538005"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..698
                     /locus_tag="VFN38_14365"
     CDS             <1..698
                     /locus_tag="VFN38_14365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TIGR00266 family protein"
                     /protein_id="HET9013006.1"
                     /translation="APGDEVRAEAGAMMYMSDAIEMDSKMEGGFLGGLKRKFLAGESF
                     FITYFRSTRSAGKVAFAGPYPGKIIQVDLNNQQLLCQKDSFLCAVGDIDLSIAFTRKI
                     GAGFFGGEGFILQKMEGTGQLFIHSGGTIVPMQLAAGEKLRVDTGCLVALDPTVDYDI
                     VRVGGIKTSLFGGEGLFFAALTGPGRVWLQTLPFSRLADRIHAAYRSDREDVKRDFGG
                     MLGGLGDLIGGDK"
     gene            818..1162
                     /locus_tag="VFN38_14370"
     CDS             818..1162
                     /locus_tag="VFN38_14370"
                     /inference="COORDINATES: protein motif:HMM:NF013427.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraR/DksA family transcriptional regulator"
                     /protein_id="HET9013007.1"
                     /translation="MEQSQTPYKEALLRKRGEILAAGGGVKPLTASMDTNSRQGDLAD
                     QASGNNEVHIQLKLKQTDAKILQAIEEALYRLEKGTYGICRDCGEPIAPARLNAIPWT
                     RVCITCKEKQSA"
     gene            1159..1671
                     /locus_tag="VFN38_14375"
     CDS             1159..1671
                     /locus_tag="VFN38_14375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013008.1"
                     /translation="MKATELLDLLRQFRRDKLTMKRRHEEAARSVSDYDFNNTYQYVI
                     AREEMHVSWATDAVIDVSAASGQPDAVLEDVPAPQVTVQGKGASAQASVMAQDRDQAQ
                     AFFDKWQPLVASMTHARHRTMLNVILGETLEHKRFFEQAIAGRTDLLGRRADGAGTGG
                     GVLPTRWIEQ"
     gene            1656..2162
                     /gene="folK"
                     /locus_tag="VFN38_14380"
     CDS             1656..2162
                     /gene="folK"
                     /locus_tag="VFN38_14380"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR01498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003848 -
                     2-amino-4-hydroxy-6-hydroxymethyldihydropteridine
                     diphosphokinase activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HET9013009.1"
                     /translation="MDRAITDLPRPVAIAIGSNLGDRRAALQFAIDRLSSLLTGLTAS
                     TIIETDPESVDGDVLPDQPVYLNAVVSGSTTLDGRTLLEQLLAIERDYGRERPFAGAP
                     RTLDLDLILLGNDIIEEPGLHVPHPRFRDRFFVLGPLAEIAPALVDPVTGLRVGELLV
                     RLLRDERR"
BASE COUNT          405 a          769 c          796 g          351 t
ORIGIN      
        1 tcgcgccggg cgacgaggtg cgcgccgagg ctggggccat gatgtacatg agcgacgcga
       61 tcgagatgga ctcgaagatg gagggcgggt tcctcggcgg gctgaagcgc aagtttctgg
      121 ccggcgagag cttcttcatc acctacttcc gcagcacccg cagcgccggg aaggtcgcct
      181 tcgccgggcc gtatcccggg aagatcatcc aggtggatct gaacaatcag cagctgctct
      241 gccagaagga ctcgttcctc tgtgccgtcg gcgacatcga cctgagcatc gcgttcacgc
      301 gcaagatcgg cgcggggttc ttcggcggcg aagggttcat cctgcagaag atggagggca
      361 ccggccagtt gttcatccac agcggcggca cgatcgtgcc gatgcagctc gcggccggcg
      421 agaagctgcg ggtcgatacc ggatgcctcg tcgccctcga cccgaccgtc gactacgaca
      481 tcgtccgcgt cggcggcatc aagacgtcgc tcttcggcgg cgaagggctg ttcttcgcgg
      541 cgctgacggg cccggggcgg gtgtggctgc agacgctgcc gttctcgcgg ctggccgatc
      601 gcattcacgc cgcctatcgc agcgaccggg aggacgtgaa acgcgatttc ggcggcatgc
      661 tcggcggcct cggggatctg atcggcggcg acaaatgatc gcgccggcgg cggcgccggc
      721 cgtcgcggcg cagccacggg cgggcgtttt cccacaggaa tctgatagaa ttgggttttg
      781 ccgggggagg caaaagaggc gcctgtggag agcaaccatg gaacagtccc agaccccgta
      841 taaggaagcg ctcctgcgca agcgcggcga gattctcgcg gccggaggcg gcgtcaagcc
      901 gctgaccgcg tcgatggata ccaattcacg gcagggggat ctggcggatc aggcgagcgg
      961 gaacaacgaa gtccacatcc agctcaaact caaacagacg gacgcgaaga tcctgcaggc
     1021 gatcgaggaa gccctgtacc ggctggaaaa gggcacctac ggcatttgcc gcgactgcgg
     1081 cgagcccatc gccccggcac ggctgaacgc cattccgtgg acccgcgtct gcatcacctg
     1141 caaggaaaaa caaagcgcgt gaaagccacc gagctgctcg acctgctgcg tcagttccgc
     1201 agggacaagc tgacgatgaa gcggcgccac gaggaagcgg cgcgcagcgt cagcgactac
     1261 gacttcaaca atacgtacca gtacgtcatc gcccgcgaag agatgcacgt cagctgggcc
     1321 actgacgccg tgatcgacgt gagcgctgcg tcgggccagc ccgatgccgt gctcgaggac
     1381 gtgccggcgc cgcaggtcac cgtccagggc aagggcgctt cggcgcaggc gtcggtgatg
     1441 gcgcaggatc gcgaccaggc gcaggccttc ttcgacaagt ggcagccgct cgtcgcgtcg
     1501 atgacgcacg cgcggcaccg cacgatgctc aacgtgatcc tgggcgagac gctcgagcac
     1561 aagcggttct tcgagcaggc catcgccggg cgcaccgacc tcctgggccg ccgcgccgac
     1621 ggcgccggca cgggcggggg agtgctgccg acgcggtgga tcgagcaata accgatctgc
     1681 cgcgcccggt cgcgatcgcg atcggcagca atctcgggga ccggcgtgcg gcgctgcagt
     1741 tcgcgatcga tcgcctgtcc agcctcctca ccggcctgac ggcctcgacc atcatcgaaa
     1801 ccgatccgga gagcgtcgac ggtgacgtgc tccccgatca gcccgtctat ctcaacgccg
     1861 tggtgtccgg atccacgacg ctcgacggac ggaccctgct cgagcagctg ctcgccatcg
     1921 agcgcgacta cggccgcgaa cgcccattcg ccggtgcgcc gcggacgctc gatctcgacc
     1981 tgatccttct tggcaacgac atcatcgagg agcccggtct gcacgtgccg catccgcgtt
     2041 ttcgcgaccg gttctttgtg ctcggcccgc tcgcggagat tgccccggcg ttggtcgacc
     2101 cggtgacggg gttgcgagtg ggggagctgc tggtccggtt gctgagagac gaacggcgct
     2161 agccacatcc ggtgccgcac ccgacgtggc gcacctgacg tgccgcacct gacgtgccgc
     2221 acccgacgtg gcgcaccccg acgtggcgca cccgacgtgg cgcacccgac gtggcgcacc
     2281 tggcgtggcg cacccgacgt ggcgcacttg acgtgggcac c
//
LOCUS       DASSYW010000906         2093 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1298311, whole genome shotgun sequence.
ACCESSION   DASSYW010000906 DASSYW010000000
VERSION     DASSYW010000906.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2093)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2093)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2093
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1298311"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(140..1141)
                     /locus_tag="VFN38_14385"
     CDS             complement(140..1141)
                     /locus_tag="VFN38_14385"
                     /inference="COORDINATES: protein motif:HMM:NF013292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase"
                     /protein_id="HET9013010.1"
                     /translation="MQVAYDLMVRQHADPLDAAIAGVNIQELDPEDQSVGLGGLPNAD
                     GVVQLDASVMHGPTRRAGAVGALEDIATPSLVAKAVMDYTDHVMLVGAGARRFALEMG
                     FTPQNLLTEKSRQAWLRWRANLNRDDAWLDHPDDVRIAAPTRPPRTSSRRPAFRNSAG
                     DGVSHVFTDERGVPHTYGTINLNAVTATGDLGSVTTTSGMSWKVPGRVGDSPIIGAGQ
                     YCDNEVGAAGSTGRGEANIKVCGAFLAVELMRQGMTPEAALMKVMERVIAMTEKRLLD
                     DRGRPYFDLDFYAVNKRGEWAGACCYQGSHFAVADATGARLVQSAYLFRDSERPKTG"
     gene            1467..>2093
                     /locus_tag="VFN38_14390"
     CDS             1467..>2093
                     /locus_tag="VFN38_14390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HET9013011.1"
                     /translation="MTNTVRDHLRALAFLEGLTDTAVHQLSRIVQPMEYPCDAMLFEE
                     GEQRHLLALVVSGAVAIEKRQNGRPIRLATLGPGEAVGEGLLLDDSAHGTSARAILNT
                     TAYVLSREQVDDMLKESPTLYAALVGRAARAISQRLSAVDATLVGRGRSLGFGGVRTR
                     TEHDLLGDREVPDDALYGVQTLRALENFPITGVPLREFPALIEALASVK"
BASE COUNT          291 a          734 c          760 g          308 t
ORIGIN      
        1 ggcgaacctc aagctcaccg agagcgcgac gctcacgtcg gcgtccgccg cacagccggc
       61 ggcgccgcgg aagacgatct cgctcgcgct cggcgacgcg ctgccggcgt gatccccgcc
      121 tgagcgcgcg cggagacggt cagcccgtct tcgggcgctc gctgtcgcgg aacaggtagg
      181 cggattggac gagtcgcgcg cccgtggcgt cggcgacggc gaagtgactg ccctggtagc
      241 agcaggcgcc cgcccactcg ccccgcttgt tgaccgcgta gaagtcgagg tcgaagtacg
      301 gccgcccgcg gtcgtcgagc agccgcttct cggtcatggc gatcacccgc tccatgacct
      361 tcatgagcgc ggcttcgggg gtcatcccct ggcgcatgag ctccacggcc aggaacgcgc
      421 cgcagacctt gatgttcgct tcgccgcgcc cggtggagcc ggcggcgccg acctcgttgt
      481 cgcagtactg cccggcgccg atgatcggtg agtcgcccac gcgtcccggg accttccacg
      541 acatgccgct cgtcgtcgtc acggagccca gatcaccggt ggccgtcacg gcgttgaggt
      601 tgatcgttcc ataggtgtgc ggcacgccgc gctcgtccgt gaagacgtgc gacaccccgt
      661 cgccggccga attccgaaac gcggggcgac ggctcgaggt gcggggtgga cgggtcggcg
      721 cggcgatccg aacgtcgtcg gggtggtcca gccatgcgtc gtcccggttg aggttggcgc
      781 gccagcgaag ccaggcctgt cggctcttct cggtcagcag gttctgcggg gtgaatccca
      841 tctcgagggc gaagcgccgg gccccggcgc ctacgagcat gacgtgatcg gtgtagtcca
      901 tcaccgcctt ggccacgagc gagggggtcg cgatgtcctc gagcgcgccc acggcgccgg
      961 cacgacgcgt cggcccgtgc atgacgctgg cgtcgagctg cacgacgccg tcggcgttgg
     1021 gcagaccgcc cagccccacc gactgatcct cggggtcgag ctcctgaatg ttgacgcccg
     1081 cgatggcggc gtcgagcgga tcggcgtgct ggcggaccat caggtcgtag gcgacctgca
     1141 cgccacgcag cccgttggcg ctgccgacga cggccggccg gcgacggacg tcgtgagcgc
     1201 cgcggcgcgg cgcggcagga cgagggcggc cgcggtggca ctggcggtgg cgccgaggaa
     1261 gtcacggcgg gagatgggca tggggtgctc tggtacggtt gagactgcgt cgaacgttct
     1321 tactacggtc cgacgacggg aaacgctagg agccgaggga gcgatggccc ggcggcccgg
     1381 aggcccgagg gcacgcgctt ccgggcctgc gtccctccgg gcgtccgggt aacgtccggc
     1441 atgggcactc ggtagttttc ggccacatga ccaacaccgt acgcgatcac ctccgcgccc
     1501 tggccttcct ggaagggttg accgataccg ccgtccatca gctctcgcgc atcgtgcagc
     1561 cgatggagta cccgtgcgac gcgatgctct tcgaggaggg ggagcagcgg catctcctcg
     1621 cgctcgtcgt gtcgggcgcg gtcgcgatcg agaagcgcca gaatggccgg ccgatccgcc
     1681 tcgccaccct cggccccggc gaggccgtcg gcgaggggct gctgctcgac gattccgcgc
     1741 acggcaccag cgcccgggcc atcctcaaca ccaccgccta cgtcctgagc cgggagcagg
     1801 tggacgacat gctcaaggag tcgcccaccc tgtacgccgc gctggtgggc cgggccgcgc
     1861 gggccatctc gcagcgcctc tccgcggtgg acgcgaccct cgtggggcgc ggacgctcgc
     1921 tcggcttcgg cggcgtgcgc acccgcaccg agcacgacct gctcggcgac cgcgaggtgc
     1981 ccgacgacgc gctgtatggc gtacagacgc tgcgcgccct ggagaacttt cccatcaccg
     2041 gcgtgccgct gcgggagttc ccggcactga tcgaggcgct cgcatcggtg aag
//
LOCUS       DASSYW010000907         2393 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1261655, whole genome shotgun sequence.
ACCESSION   DASSYW010000907 DASSYW010000000
VERSION     DASSYW010000907.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2393)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2393)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2393
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1261655"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(117..1775)
                     /locus_tag="VFN38_14395"
     CDS             complement(117..1775)
                     /locus_tag="VFN38_14395"
                     /inference="COORDINATES: protein motif:HMM:NF024206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HET9013012.1"
                     /translation="MGRITQVCLAALLTGAVIATVTAASGDGSLAKAVNAGDLPAVRA
                     LLKTGTDVNARSGDGSTPLLWAAHTSNLEIARALIAAKATVDAANDFGVTPLLEASRN
                     GDAPMVELLLRAGADPKKTHPEGETPLLSASRAGSVPVVRLLLARGADVNQPEKFQQT
                     TALMWAAAEGHLPVVDLLLEAGANPNLQGHVTSLGTRHNADHPTGGFTALMFAARNGN
                     EAMVRKLLSRGANINVKNGDDASAAMVAIYNDRFDVAATLIELGSDVKDGSLYVAVEM
                     RDATTDQFAFDGSRRRPDNPNTKTALDLMKMLLERGADPNERFQGQFHSTHMPNTDRF
                     DNTPFFRAAVAADVEALKVMIAHGAKLDQTPPIEKEPERAPGDITVGGRRANPNAGRV
                     PAMVAMTGGRGPAMTGGPAYIRDGAAPYREPGSRNPVEAFTLLISAGANPNAKGPDGS
                     TLLHQAARAGNLDMIRARAAAKVDFTQKNNDGFTALDVAEGKQPPTGAGGRAGGPPPG
                     GRRGGRGASQQDVAKLLRELMGLPPAAPAATPEKDATPEKEAAQ"
     gene            1989..>2393
                     /locus_tag="VFN38_14400"
     CDS             1989..>2393
                     /locus_tag="VFN38_14400"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HET9013013.1"
                     /translation="MRALLAVPLLMVSVHLLAQPQPRWVDPSPHTVRTVQVEPGTSIE
                     VLDWGGPGRTLVLLAQLGQTAHLYDDWAPKLARSYRVIGITRRGHGESAMAPDAGMST
                     ERLGADIVAVLDALKVPSPVLVGHGFAGEEMSW"
BASE COUNT          317 a          845 c          819 g          412 t
ORIGIN      
        1 ggtcttcggc aatggagcgg gatgcgacgc aacaagtttt ggcgcggcgg taccttgcgc
       61 gccgacgttc accagggtcg ccagcgtcaa cgcggacgcg gcaaagagca ccttcttcac
      121 tgtgcggctt ccttctcggg ggtggcgtct ttctcgggcg tcgcggccgg cgcggccggg
      181 ggcagaccca tgagctcgcg cagcagcttc gccacgtcct gctggctcgc gccgcgtccg
      241 ccgcggcgtc cgccgggcgg cggcccgccc gcgcgtccgc ccgcaccagt gggcggctgc
      301 ttgccttcgg ccacgtcgag cgccgtgaag ccgtcgttgt tcttctgcgt gaaatcgacc
      361 ttcgccgcgg cccgcgcgcg aatcatgtcc aggttgccgg cgcgcgccgc ctggtggagc
      421 agcgtgctgc cgtcgggccc cttcgcgttc gggttggcgc ccgccgaaat cagcagcgtg
      481 aacgcctcga cgggattgcg gctgcccggt tcgcggtacg gcgcggcgcc gtcgcggatg
      541 taagcgggtc cgccggtcat ggcgggacca cgcccgccgg tcatcgccac catcgccggc
      601 acgcggcccg cattggggtt ggcgcgccgc ccgcccacgg tgatatcacc cggcgcccgt
      661 tccggctcct tttcgatcgg cggcgtctga tcgagcttcg cgccgtgcgc gatcatcacc
      721 ttgagcgcct cgacgtccgc cgccaccgcc gcgcggaaga acggcgtgtt gtcgaagcgg
      781 tcggtgttcg gcatgtgcgt ggagtggaac tgcccctgga agcgctcgtt cggatccgcg
      841 ccgcgctcga gcagcatctt catcaggtcg agcgccgtct tggtgttcgg gttgtccggc
      901 cggcggcgcg agccgtcgaa cgcgaactgg tcggtggtgg cgtcgcgcat ctccacggcc
      961 acgtagagcg atccgtcctt cacgtccgac ccgagctcga tcagcgtggc cgccacgtcg
     1021 aagcggtcgt tgtagatcgc caccatggcc gccgaggcgt cgtcgccgtt cttcacgttg
     1081 atgttggcgc cgcgcgacag gagcttgcgc accatcgcct cgttgccgtt gcgggccgca
     1141 aacatcagcg ccgtgaaacc gccggtcgga tgatcggcgt tgtggcgcgt gccgagcgac
     1201 gtcacgtgac cctgcaggtt cgggttggcg ccggcttcga gcagcagatc gaccaccggg
     1261 aggtggcctt ccgcggccgc ccacatcaga gccgtcgtct gctggaactt ctcgggctga
     1321 ttcacgtccg cgccgcgcgc gagcagcagc cgcaccaccg gcacgctgcc ggcacgcgag
     1381 gcgctgagca gcggcgtctc gccttcggga tgcgtcttct tcggatcggc gccggcgcgc
     1441 agcagcagct ccaccatcgg cgcgtcgccg ttgcggctcg cctcgagcag gggagtgacc
     1501 ccgaagtcgt tggccgcgtc caccgtcgcc ttggcggcga tgagcgcgcg ggcaatctcg
     1561 agattggagg tgtgcgcggc ccagagcagc ggcgtggagc cgtcgcccga gcgcgcgttg
     1621 acgtcggtgc cggtcttgag cagcgcccgg acggcgggga ggtcgcccgc attgaccgct
     1681 ttcgccagcg agccgtcccc actggcggcg gtcacggtgg cgatcaccgc gcccgtcagt
     1741 agagcagcca gacacacctg cgtgatgcga cccatcagcc ccgctccttc tatgcccgtt
     1801 ccgacgcctt cgtccttatc tttgcaggct gcgcaaggat acccgatcga tcgggaaaac
     1861 tcgttcgcac agcgcaattt acagtttttc cgtcgccaaa tttctatcga atttccagcc
     1921 gccgcgctgt acccgactcg ggtgatacgc cggcggaact tgccgccgct tacgggttct
     1981 aaaacggcgt gcgtgccctc ctcgccgtcc cgctgctcat ggtatcggtc cacctgctgg
     2041 cccaaccaca gccgcgatgg gtggacccgt ccccgcacac cgtccggacg gtgcaagtag
     2101 agccgggcac cagcatcgag gtcctggact ggggcgggcc cggccgcacc ctcgtcctgc
     2161 tcgcgcagct ggggcagacc gcccatctct atgacgactg ggcgccgaag ctggcgcgct
     2221 cgtatcgcgt catcggcatc acgcggcgag gccacggcga gtcggcgatg gcaccggacg
     2281 ccggcatgtc caccgagcgc ttgggcgccg atatcgtcgc cgtcctcgac gccctgaaag
     2341 tgccgagccc ggtgctggtt gggcatggct tcgccggaga agaaatgtcc tgg
//
LOCUS       DASSYW010000908         2404 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1538020, whole genome shotgun sequence.
ACCESSION   DASSYW010000908 DASSYW010000000
VERSION     DASSYW010000908.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2404)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2404)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2404
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1538020"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1003
                     /locus_tag="VFN38_14405"
     CDS             <1..1003
                     /locus_tag="VFN38_14405"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HET9013014.1"
                     /translation="ATATNRSNSNIPLATHWDKTFPQSSRVAHRKVTFRNRFGIALAA
                     DLYQPKAGGAGKLPALVLSGPFGAVKEQVAGLYAQTLAERGFVTLAFDPSFTGESGGE
                     PRHVASPDINTEDVSAAVDFLGLQPFVDRERIGVVGICGWGGIALNAVAVDKRVKAVV
                     ASTMYDMSRVMSKGYNDSVTPEQRARTLEQLSRQRWQDAEKGSPALGPVYNELKGGEP
                     QFMVEYADYYKSRQRGFHPRAINSNSSWTITTPLSFMNMPLMTTIAEISPRPVLFIHG
                     EKAHSRYFSETAYAAAAQPKELMIIQGANHVDLYDRMDKIPFDAIAAFFDKSLNRPA"
     gene            1000..2076
                     /locus_tag="VFN38_14410"
     CDS             1000..2076
                     /locus_tag="VFN38_14410"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent alcohol dehydrogenase"
                     /protein_id="HET9013015.1"
                     /translation="MTDTSTYLAHAWAARSANAPLAPLQIPRRVPTPRDVQIDILYCG
                     ICHSDLHYTHNDWAPALAAAYPVVPGHEIVGRVAAVGADATRHAVGDLVAVGCLVDSD
                     RTCPICRAGRENFCPNLTLTFGSPDRHGAAPMTFGGYSSSVVVDEHFVLRVPTNLDPA
                     GAAPLLCAGITTYSPLKRSTVGPGKKVGIVGLGGLGHMGVKLARAFGAHVVVLTTSPR
                     KAADALRLGAHEVIVSTDAAAMATHAGSFDFILDTVSAEHDINAILGLLKLEGNLTLV
                     GAPAKPLALSSFALIMGNRSVSGSNIGDIAQTQEMLDFCGRHGITADVEVIPMQQVND
                     AWQRLEKGDVKYRFVIDMASMTSK"
     gene            2091..>2404
                     /locus_tag="VFN38_14415"
     CDS             2091..>2404
                     /locus_tag="VFN38_14415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013016.1"
                     /translation="MNRCLPDRALVPVLVLAGVVAGSVAPAAAQGSAVTVTQSITRAG
                     DQAGPAECFTGQVRVDPLWPADASILASGAWVTFEPGARSAWHTHPAGQRLVVLSGVG
                     LT"
BASE COUNT          393 a          865 c          778 g          368 t
ORIGIN      
        1 tgcaacggca accaaccgct ccaactccaa catccccttg gccacgcatt gggacaagac
       61 cttcccgcaa agcagccgag tggcgcaccg gaaggtcact ttcaggaacc gtttcggcat
      121 cgcgctggcc gccgacctct accagcccaa ggctggcggc gccggcaagc tgccggcact
      181 ggtgctcagc ggccccttcg gggcggtcaa ggagcaggtg gccggcctct acgcccagac
      241 gctggcggag cggggcttcg tcaccctcgc cttcgacccg tcgttcaccg gcgagagcgg
      301 cggcgagccg cgccacgtgg cctcgcccga catcaacacc gaggatgtca gcgccgcggt
      361 ggacttcctc gggctgcagc ctttcgtcga tcgagagcgc atcggcgtcg tcggcatctg
      421 cggctggggc ggcatcgcgc tgaatgccgt cgcggtggac aagcgcgtca aggccgtcgt
      481 cgccagcacc atgtacgaca tgtcgcgcgt catgtccaag ggttacaacg acagcgtgac
      541 gcccgaacag cgcgcccgga cgctggagca actgagccgg cagcgttggc aggatgcgga
      601 aaagggaagc ccggcactcg gccccgtgta caacgaactg aaaggcggcg agccacagtt
      661 catggtcgaa tacgccgatt actacaagtc gcgccagcgc gggttccatc cgcgagcgat
      721 caattcgaac agctcgtgga cgatcaccac cccgctgtcg ttcatgaaca tgccgctgat
      781 gaccaccatc gcggagatct cgccgcgccc cgtcctgttc atccatggcg agaaagccca
      841 ctcgcgctat ttcagcgaaa ccgcctacgc ggccgccgcg cagccgaagg aactcatgat
      901 catccagggc gccaaccacg tcgatctgta cgaccggatg gacaagatcc cgttcgatgc
      961 gattgccgcc ttcttcgaca agtcactgaa ccgacctgca tgaccgacac ctcgacctac
     1021 ctcgcccatg cctgggccgc ccgcagcgcg aacgcgccgc tggcaccgct gcagatcccg
     1081 cgccgcgtgc cgacgccgcg cgacgtgcag atcgacatcc tctactgcgg catctgccac
     1141 tccgacctgc actacaccca caacgactgg gcgccggcgc tcgccgcggc ctacccggtc
     1201 gtgccagggc acgagatcgt cggccgcgtc gccgcggtgg gcgccgatgc gacgaggcac
     1261 gcggtcggcg atctcgtcgc cgtcggctgc ctcgtcgact cggaccggac ctgtccgatc
     1321 tgccgcgccg ggcgcgagaa cttctgcccg aacctgacgc tgaccttcgg ctctcccgac
     1381 cgccatggcg ccgcgccgat gaccttcggc ggttactcca gcagcgtcgt cgtcgacgag
     1441 cacttcgtgc tgcgtgtgcc gacgaacctg gacccggcgg gcgctgcgcc gctgctgtgc
     1501 gccggcatca cgacctactc gccgctcaag cgcagcaccg tcggccccgg caagaaggtg
     1561 ggcatcgtcg gcctgggcgg gctgggccac atgggggtga agctcgcgcg cgcgttcggc
     1621 gcgcacgtcg tcgtgctgac cacctcgccg cgcaaggccg ccgacgcgct gcgcctgggc
     1681 gcgcacgagg tgatcgtctc gaccgatgcc gccgcgatgg ccacgcacgc cggcagcttc
     1741 gacttcatcc tcgacaccgt ctcggccgag cacgacatca acgccatact cgggctgctg
     1801 aagctcgaag gcaacctgac gctggtcggc gcgccggcca agccgttggc gctgtcgtcg
     1861 ttcgcgctga tcatgggcaa ccgcagcgtg tcggggtcca acatcggcga catcgcgcag
     1921 acgcaggaga tgctcgactt ctgcggccgg cacggcatca ccgccgacgt cgaggtgatc
     1981 ccgatgcagc aggtcaacga cgcgtggcag cgcttggaaa agggcgacgt caagtaccgg
     2041 ttcgtgatcg acatggcgtc gatgacgagc aagtgacgag ggatgcgtcg atgaaccgtt
     2101 gtttgcccga ccgcgccctc gtccccgttc tggtgctcgc cggcgtcgtc gccggttccg
     2161 tcgcaccggc ggcagcgcag ggttctgcgg tgactgtgac gcagtcgatc actcgagcag
     2221 gcgatcaggc cggcccagcc gagtgcttca ccgggcaggt gcgggtcgat ccgctctggc
     2281 cggccgacgc cagcatcctt gcgtcgggcg cctgggtgac cttcgagccc ggcgcccggt
     2341 cggcgtggca cacgcacccg gcgggccagc ggctcgtcgt gctctccggc gtcggtctga
     2401 cgca
//
LOCUS       DASSYW010000909         2164 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_451163, whole genome shotgun sequence.
ACCESSION   DASSYW010000909 DASSYW010000000
VERSION     DASSYW010000909.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2164)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2164)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2164
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_451163"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(56..>2164)
                     /locus_tag="VFN38_14420"
     CDS             complement(56..>2164)
                     /locus_tag="VFN38_14420"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HET9013017.1"
                     /translation="VFLAIDPDGLVSIVCHRSEMGQGVRTAMPMIVADELEADWTRVK
                     VIQADGDPRYGDQNTDGSRSGRREFVRLRQAGAAARTMLEQAAATRWSVPASEVQARM
                     HAVVHVPSGRKLGFGELAAAASALKVPDAASLRLKPKADFRFIGKDVPLRDGLDMVTG
                     RAIFGIDVRRPGMKYAVIARPPVYGGRVKAVDDAAALKVAAVERVVALQGAPVPSGFQ
                     PLGGVAVIARNTWAALQGREALKITWDDGPNAAYDSVEYEKAIVKSAQQPGAVARKEG
                     DVDAALGGAAKVIKADYYAPHLAHAPMEPPAAVAEVTSNGCEVWASTQDPQAARGEVA
                     KALGLPAEKVTVHVTLLGGGFGRKSKPDYCVEAALLSKQVGAPVKVTWSREDEIRHGY
                     YHTVTAQHLEAGLDARNHVTAWLHRTAFPPIGSTFAPDQARGSAGELGLGVVDVPFAI
                     PNIQCEACEARPHVRIGWFRSVNNIPHAFAVGSFADELAAASGRDPKDFLLDLLGPAR
                     HVVPKTTEKFDNYEESMETFPIDTARFRHVVETAAAKAGWGRQLPKGRGLGIAVHRSF
                     VTYVCTVVEVAVGADGAYTIPRVVMAVDCGTAIYPDRVRSQMEGAALMGISLAVYGQV
                     TFKNGRAEQSNFDSYQLPRMPTAPRDVRVYVLPGDYGQPMGGVGEPGVPPVPPALCNA
                     IFAATGKRIRRLPIRDQLKA"
BASE COUNT          316 a          780 c          722 g          346 t
ORIGIN      
        1 cgtccgagcc gtcagtggac cttggtccaa tggcgccgtg gacacggcgc ggcgctcagg
       61 ccttgagctg gtcccggatg ggcagccgcc ggatccgctt gcccgtggcc gcgaagatcg
      121 cgttgcagag ggcgggcggc acgggcggga cgccgggctc gccgacgccg cccatgggct
      181 ggccgtagtc gccggggagc acgtacacgc ggacgtcgcg cggcgccgtc ggcatgcgcg
      241 gcagctggta gctgtcgaag ttgctctgct cggcgcgccc gttcttgaac gtcacctgtc
      301 cgtatacagc gagactgatg cccatcagag ccgcgccttc catctgcgag cgcacgcggt
      361 cggggtaaat cgccgtgccg cagtcgaccg ccatgacgac gcgcgggatc gtgtacgcgc
      421 catcggcacc aacggccacc tcgactaccg tgcacacata cgtcacgaaa ctgcgatgaa
      481 cggcgatgcc gaggccgcgg cccttcggca gctggcgtcc ccacccagct ttcgccgccg
      541 ccgtttcgac gacgtggcgg aagcgagccg tgtcgatggg gaaggtctcc atcgactcct
      601 cgtagttgtc gaacttctca gttgtcttcg gtacgacgtg gcgtgcgggc ccgaggagat
      661 cgagcaggaa gtcctttggg tcgcgaccag acgccgcggc cagttcgtcc gcgaacgatc
      721 ccacggcgaa ggcgtgaggg atgttgttca cggacctgaa ccacccgatg cgcacgtgcg
      781 gccgtgcctc gcaagcctcg cactggatgt tcgggatcgc gaacggcacg tcgacgacgc
      841 cgagccccag ctcccctgcg ctgcctcgcg cctggtctgg tgcgaacgtc gaaccgatgg
      901 gtggaaacgc cgtgcgatgc agccacgcgg tgacgtggtt gcgggcgtcg agtccggcct
      961 cgaggtgctg ggcggtcacc gtgtggtagt agccgtggcg gatctcgtcc tcgcgcgacc
     1021 aggtcacctt caccggcgcg cccacctgct tcgacaggag ggcggcctcg acgcaatagt
     1081 ccggcttcga cttgcggccg aacccaccac cgaggagcgt gacgtgcacg gtcactttct
     1141 cggcgggcag gccgagcgcc ttggccacct cgccccgggc ggcctgcggg tcttgcgtgc
     1201 tcgcccacac ctcgcagccg ttcgatgtga cctcggcgac ggccgccggc ggttccatcg
     1261 gcgcgtgggc gaggtgcggc gcgtaatagt ccgccttgat cactttcgcc gccccgccga
     1321 gcgccgcgtc cacgtcgcct tccttgcgcg cgactgcacc cggttgctgg gcggacttca
     1381 cgatcgcctt ctcgtactcg accgagtcgt atgccgcgtt cggcccgtcg tcccacgtga
     1441 tcttcagggc ctcgcgcccc tgcaaggccg cccaggtgtt gcgcgcgatc acggcaacgc
     1501 cgccgagcgg ctggaaaccg gacgggaccg gtgcaccctg gagcgcgacc acccgctcca
     1561 ctgccgccac cttcaacgcc gccgcatcgt ccacggcctt cacgcgcccg ccgtacaccg
     1621 gcggccgggc gatgaccgcg tatttcatcc cgggccgccg gacgtcgata ccgaatattg
     1681 cgcggccggt caccatgtcg agaccgtcac gaagcggcac gtccttaccg atgaaccgga
     1741 agtccgcctt cggcttcagg cgcagcgatg cggcgtccgg caccttcagc gcggacgcgg
     1801 cggccgcgag ctcgccaaat cccagtttcc ggcccgaggg cacgtgcacg accgcgtgca
     1861 tgcgcgcctg cacttcgctc gccggcacgc tccaccgggt cgcagcggct tgctccagca
     1921 tcgtccgggc ggcagcgccg gcctggcgca gccggacgaa ctcacggcgg ccgctgcgcg
     1981 aaccgtcggt gttctggtcg ccgtacctgg gatcgccgtc agcctggatc accttcacgc
     2041 gcgtccagtc ggcttccagt tcgtcggcaa cgatcatcgg catcgcggtg cggacgccct
     2101 gacccatctc cgagcgatga cacacgatcg acaccaggcc gtcagggtcg atcgcgagaa
     2161 agac
//
LOCUS       DASSYW010000910         2450 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_299661, whole genome shotgun sequence.
ACCESSION   DASSYW010000910 DASSYW010000000
VERSION     DASSYW010000910.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2450)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2450)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2450
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_299661"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            106..795
                     /gene="ftsE"
                     /locus_tag="VFN38_14425"
     CDS             106..795
                     /gene="ftsE"
                     /locus_tag="VFN38_14425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATP-binding protein FtsE"
                     /protein_id="HET9013018.1"
                     /translation="MIRFFNVTKRYSRTGTAVHDLSLHVGKGEFVFLTGPSGAGKTTL
                     LRMVYMEERPTSGEVRVSGTSSLDATPRDVARLRRKLGIVFQDFRLLENRTAEQNVAF
                     ALEVTGAARPTIGPKVARVLTQVGLASRGTAYPKELSGGEQQRVAIARALVNDPFVLL
                     ADEPTGNLDDRATRGIFQLLREINAAGTAVMMATLNLELIRRQEFRTIEMNRGGIVFD
                     SAAQPRQAREG"
     gene            795..1640
                     /locus_tag="VFN38_14430"
     CDS             795..1640
                     /locus_tag="VFN38_14430"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease-like cell division protein FtsX"
                     /protein_id="HET9013019.1"
                     /translation="MRSLRDAFVTFRRAPLLSALSVTTIAFSLFALGLFGLVALNIRE
                     ALDRLEDRVELRAFIAEGTPPEAVAIAAADIATFPEVLSARTVTQDEALARARRELGE
                     FRDVFEGAVLPASIDVRLKPGFRDPKTVRSVAARVNTFAFVDDIRYGEEWIQKLYRLR
                     TIAGIAGIVLGLAFASVSVIIIGATIRMAVLARAKEISIMRLVGATDSYIRRPFLLEG
                     FAKGVMGGLLALLLTWVARLLIDRYIIETVFFDQRIAALGLLFGALIGLVGSSVSVGR
                     HLRSV"
     gene            1643..>2450
                     /locus_tag="VFN38_14435"
     CDS             1643..>2450
                     /locus_tag="VFN38_14435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013020.1"
                     /translation="MRALLAGVVLLLPVALPAQSADARIRAQREELERIRRERADLER
                     RMANLQGDVHDLAEEVEILDRQRVATERVLATLDRQMQSINGVVQESTDRMAKAEEEL
                     IQRRRTLQRRLVEIYKRGPLYPAEAMLTARSFGELVARYKYLHEIAVYDRSLVKRLES
                     LRDDIARQRSELVRLRDAVAENRGDKLREEERLASLKRLRSTSLLQAQRSTQQIQQRL
                     AQIRQSEARLGNVLATIEAERVRSAAARPNAPRAVSTLKSADAGRLDWPVD"
BASE COUNT          350 a          856 c          895 g          349 t
ORIGIN      
        1 gatcgggctc ctgaaggcgg tcatcgacac ggtgacggcg cgatcgagct ggcaggtgct
       61 ggagctggac gacgtgatgg aggacgggcc cgtcgtgcgc aaggcatgat ccggttcttc
      121 aacgtcacca agcggtactc ccgcacgggc acggcggtgc acgacctctc cctgcacgtg
      181 ggcaagggcg agttcgtctt cctcaccggc ccgagcggcg cgggcaagac gacgctgctc
      241 cgcatggtgt acatggagga acggccgacg tcgggcgagg tgcgcgtgag cggcacgagc
      301 tcgctcgacg ccacgccgcg cgacgtggcg cggctgcgcc gcaagctggg gatcgtcttc
      361 caggacttcc gcctgctgga gaaccggacc gcggagcaga acgtggcctt cgcgctggag
      421 gtgacgggcg ccgccaggcc gacgatcggg cccaaggtgg cgcgcgtgct cacccaggtg
      481 gggctggcgt ccagggggac ggcctatccg aaggagctgt ccggcgggga gcagcagcgg
      541 gtcgcgatcg cgcgcgcgct ggtgaacgac ccgttcgtcc tcctcgccga cgagcccacc
      601 ggcaacctcg acgaccgcgc cacccgcggc atcttccagc tcctgcgcga gatcaacgcg
      661 gcgggcacgg cggtgatgat ggcgacgctc aacctggagc tgatccggcg ccaggagttc
      721 cggaccatcg agatgaaccg cggcggcatc gtgttcgact cggcggcgca gcctcgccag
      781 gcgcgggagg gctgatgcga tcgctgcgcg atgccttcgt caccttccgc cgcgcgccgc
      841 tgctcagcgc gctgagcgtc acgacgatcg ccttctccct cttcgccctc gggctgttcg
      901 gcctcgtggc gctcaacatc cgcgaggcgc tggaccgcct ggaggaccgg gtggagctgc
      961 gcgccttcat cgccgaaggc actcctccgg aggcggtcgc catcgccgcg gcggacatcg
     1021 ccaccttccc cgaggtgctc tcggcgcgga cggtcaccca ggacgaggcc ctcgcccgcg
     1081 cgcggcgcga gctcggcgag ttccgcgacg tgttcgaggg cgcggtgctc cccgcttcca
     1141 tcgacgtccg cctcaagccg ggcttccgcg acccgaagac cgtgcgcagc gtggccgccc
     1201 gcgtgaacac cttcgccttc gtcgacgaca tccgctacgg cgaggagtgg atccagaagc
     1261 tctaccggct gcggaccatc gccggcatcg ccggcatcgt gctcggcctc gccttcgcgt
     1321 cggtgtcggt gatcatcatc ggcgccacca tccggatggc ggtgctggcg cgcgcgaagg
     1381 agatctccat catgcggctc gtgggcgcca cggactccta catccgccgc cccttcctgc
     1441 tggaggggtt cgccaagggc gtgatgggcg gcctgctcgc cctgctgttg acgtgggtcg
     1501 cccggctgct catcgaccgc tacatcatcg agacggtgtt cttcgaccag cggatcgccg
     1561 cgctcggcct gctgttcggc gcgttgatcg gcctggtggg cagctcggtg tcggtcggga
     1621 ggcacctacg cagcgtgtga cgatgcgcgc gctgctcgcg ggcgtcgtgc tcctgctgcc
     1681 ggtcgccctg ccggcgcagt ccgccgacgc gcgcatccgc gcccagcgcg aggagctgga
     1741 gcgcatccgc cgcgagcgcg ccgacctgga gcgccgcatg gcgaacctcc agggcgacgt
     1801 gcacgacctg gccgaggagg tggagatcct cgaccgccag cgcgtcgcga ccgagcgcgt
     1861 gctggcgacg ctcgaccggc agatgcagtc gatcaacggc gtcgtgcagg aatccaccga
     1921 ccggatggcg aaggcggagg aggagctgat ccagcggcgc cggaccctcc agcgccggct
     1981 ggtggagatc tacaagcgcg gcccgctgta tccggccgaa gcgatgctca cggcgcggtc
     2041 gttcggcgag ctggtggcgc gctacaagta tctgcacgag atcgcggtgt acgaccggtc
     2101 gctcgtgaag cggctcgagt cgctgcgcga cgacatcgcc cgccagcgga gcgagctcgt
     2161 gaggctccgc gacgcggtgg ccgagaaccg cggcgacaag ctgcgcgagg aggagcggct
     2221 ggcgagcctg aagcggctgc gctccacgag ccttctgcag gcacagcgga gcacccagca
     2281 gatccagcag cggctcgccc agatccggca gtccgaggcg cgcctcggca acgtgctggc
     2341 gaccatcgag gcggagcggg tgcgcagcgc cgcggcgcgt ccgaacgcgc cgcgcgccgt
     2401 cagcacgctg aagtcggcgg acgcgggccg gctggactgg ccggtggacg
//
LOCUS       DASSYW010000911         2489 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1468260, whole genome shotgun sequence.
ACCESSION   DASSYW010000911 DASSYW010000000
VERSION     DASSYW010000911.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2489)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2489)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2489
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1468260"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1231)
                     /locus_tag="VFN38_14440"
     CDS             complement(<1..1231)
                     /locus_tag="VFN38_14440"
                     /inference="COORDINATES: protein motif:HMM:NF024771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mandelate racemase/muconate lactonizing enzyme
                     family protein"
                     /protein_id="HET9013021.1"
                     /translation="MRITGVHTAVVEANYDWTFVRVDAEREGLSGIGECFCAPGLTAI
                     VRDLAPLLIGEDARDVDRLWAKLRWGCSGAGSSAGIVYNAISGVEAALWDLVGQLYGV
                     PIHRLLGGRFRDSVRMYADCHAGEALHSMDATMVERPARWGQDPPEQVASGQVRNPEH
                     GRAYAKGLPDEVFTPELYAARARQVVADLGFSALKFDLDVPTPYMQDTASGTLSRAEI
                     AYMVGLAAAVIDAVGDEVDVAFDCHWRYQVSDASRLAHELEDLGLMWLEDPVPPENVA
                     ALARVTTSTSTPICTGENGYMRHGFREAFEAGAIDIAAPDPQKTGGLLETRRIADYAD
                     THYISMAPHCIASPIGTVANVHVAAAIPNFLALEWHGMSVPFWNDLAVGFDGPVIDGG
                     RVKVPDAPGLGVTLNLEL"
     gene            1278..>2489
                     /locus_tag="VFN38_14445"
     CDS             1278..>2489
                     /locus_tag="VFN38_14445"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HET9013022.1"
                     /translation="MEKQVMRKVITRLMPALLVLYVIAYLDRVNVTFAQDRLEEDLGF
                     SGAVYGFGAGIFFIGYFLLEVPSNLALHRFGARKWMARIMITWGLISACTMFVTSPLS
                     FYAVRFLLGIAEAGFFPGMILYLSYWFPARERARAVGVFMSAIAISYAIGAPISGGIM
                     SLMGGVAGLEDWQWLFLLEAIPAIVAGVLVFLKLPDGPQDAGWLDAEEKRWLQATLDG
                     EDEQREKHSIGEAIKDRRVLLFAALYFTMVVNVYGLSFWVGEMVDKIDGLSDVGKGFV
                     TAIPYTVAIVGMLVIPRYSDRTGERKRVVSACLALAAVAFVLSTIVSPVAAIAALAVG
                     LFCLLGVHGVFWTMPTAMLSGAAAAAGIAAINSIGNIGGFVGPYLVGLVKDATGSTDG
                     GLVALATLLAIG"
BASE COUNT          354 a          893 c          845 g          397 t
ORIGIN      
        1 ccagctcgag gttcagcgtc acgcccagcc ccggcgcgtc gggcaccttc acgcgcccgc
       61 cgtcgatcac gggcccgtcg aagcccaccg ccaggtcgtt ccagaagggc acgctcatcc
      121 cgtgccactc gagcgccagg aagttcggga tcgcggcggc gacgtggacg ttcgcgaccg
      181 tcccgatcgg cgacgcgatg cagtgcggcg ccatcgagat gtagtgcgtg tcggcgtagt
      241 cggcgatccg ccgcgtctcg agcagcccgc cggtcttctg cggatcgggc gcggcgatgt
      301 cgatcgcccc cgcctcgaac gcctcacgga agccatggcg catgtagccg ttctccccgg
      361 tgcagatcgg cgtcgacgtc gacgtcgtca cccgcgccag cgccgccacg ttctcgggcg
      421 ggacgggatc ctcgagccac atcagcccga ggtcctcgag ctcgtgagcc agtcgcgacg
      481 cgtcgctgac ctggtagcgc cagtggcagt cgaacgcgac gtcgacctcg tcgccgacgg
      541 cgtcgatcac cgccgcggcg agccccacca tgtaggcgat ctccgcccgc gacaacgtcc
      601 ccgacgcggt gtcctgcatg tacggcgtgg gcacgtcgag atcgaacttc aaggcggaga
      661 agccgaggtc ggcgaccacc tggcgcgccc gcgcggcgta gagctcaggc gtgaagacct
      721 cgtccgggag gcccttcgcg tacgcacgcc cgtgctcggg attgcgcacc tgacccgacg
      781 cgacctgctc cggcgggtcc tgcccccagc gcgccgggcg ctcgaccatc gtcgcgtcca
      841 tcgagtgcag cgcctcgccc gcgtggcaat cggcgtacat gcgcaccgag tcgcggaacc
      901 ggccgcccag gaggcgatgg atcggcacgc cgtacaactg gccgacgaga tcccagaggg
      961 ccgcctcgac cccggagatc gcgttgtaga cgatgcccgc cgacgaccct gcgccggagc
     1021 agccccagcg cagcttcgcc cacaggcggt cgacgtcgcg cgcgtcctca ccgatcagca
     1081 gcggcgcgag atcgcggacg atcgcggtca gcccgggcgc gcagaagcac tcgccgatgc
     1141 ccgacaaccc ttcgcgctcg gcgtcgacgc gcacgaaggt ccagtcgtag ttggcctcga
     1201 cgacggcggt gtgcacacca gtgatcctca tcgcggccat cgtttcaaac cgcgcgaccg
     1261 cggcaagcct tgaccccatg gagaaacagg tcatgcgcaa ggtcatcacg cggttgatgc
     1321 cggctctgct ggtgctctac gtcatcgcct acctcgaccg cgtgaacgtc acgttcgcgc
     1381 aggaccgcct tgaggaggac ctcggcttct ccggcgccgt ctacggcttc ggcgccggga
     1441 tcttcttcat cggctacttc ctgctggagg tgccgtcgaa cctggcgctg caccgcttcg
     1501 gcgcgcgcaa gtggatggcc cggatcatga tcacgtgggg cctgatcagc gcctgcacga
     1561 tgttcgtgac cagcccgctg agcttctacg ccgtgcgctt cctgctcggc atcgccgagg
     1621 ccggcttctt ccccgggatg atcctgtacc tgagctactg gttcccggcg cgcgagcggg
     1681 cgcgcgcggt cggcgtgttc atgagcgcga tcgcgatctc ctacgcgatc ggcgccccga
     1741 tctcgggcgg gatcatgtcg ctgatgggcg gcgtcgccgg cctcgaggac tggcagtggc
     1801 tgttcctgct cgaggcgatc ccggcgatcg tcgccggcgt gctcgtcttc ctcaagctgc
     1861 ccgacggccc gcaggacgcg ggctggctcg acgccgagga gaagcgctgg ctgcaggcga
     1921 cgctcgacgg cgaggacgag cagcgcgaga agcactcgat cggcgaggcg atcaaggacc
     1981 gccgcgtgct gctgttcgcg gccctgtact tcacgatggt cgtcaacgtg tacggcctct
     2041 cgttctgggt cggcgagatg gtcgacaaga tcgacggcct gagtgatgtc ggcaagggct
     2101 tcgtgaccgc gatcccgtac accgtggcga tcgtcggcat gctcgtcatc ccgcgctaca
     2161 gcgaccgtac gggcgagcgc aagcgggtcg tgtcggcctg cttggcgctc gccgccgtgg
     2221 cgttcgtgct cagcaccatc gtcagccctg tcgcggcgat cgcggcgctg gccgtcggcc
     2281 tgttctgcct gctcggcgtc cacggcgtct tctggacgat gccgaccgcg atgctcagcg
     2341 gcgcggcggc cgcggcgggc atcgccgcga tcaactcgat cggcaacatc gggggcttcg
     2401 tcgggcccta cctggtcggc ctcgtcaagg acgcgacggg ctcgaccgac ggcggcctgg
     2461 tcgcgctcgc cacgctcctg gcgatcggc
//
LOCUS       DASSYW010000912         2040 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_141820, whole genome shotgun sequence.
ACCESSION   DASSYW010000912 DASSYW010000000
VERSION     DASSYW010000912.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2040)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2040)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2040
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_141820"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..364
                     /locus_tag="VFN38_14450"
     CDS             <1..364
                     /locus_tag="VFN38_14450"
                     /inference="COORDINATES: protein motif:HMM:NF014910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /protein_id="HET9013023.1"
                     /translation="VSTDWAVPYPHLARAIAKARALADEAQVPQAVTYGHAGNGHPHQ
                     NFIAHDADELARIERVVEATLREVIALGGTVAAEHGIGKLKRKWLPLQMSPLQVRTMQ
                     AVKRELDPAGILAPGNVL"
     gene            361..1017
                     /locus_tag="VFN38_14455"
     CDS             361..1017
                     /locus_tag="VFN38_14455"
                     /inference="COORDINATES: protein motif:HMM:TIGR01488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IB family phosphatase"
                     /protein_id="HET9013024.1"
                     /translation="MSADARGFASVVLDVDSTLCGVEGIDWLAALRGSAVGAKVTELT
                     DQAMRGRIKLDAVYGERLALVHPTRDEVEMLAGLYASSLAPGAARAIRRMRDAGRRVV
                     LVSGGVRDAILPVARKLGLGDEDVHAVSLQFDADGAYVGFDAASPLTTAVGKRTVVEA
                     LALPPRVLAVGDGATDLAIRPVVEAFAAFTGFVTRPAVVNDADHVVASFDQLSTLVLA
                     "
     gene            1014..>2040
                     /locus_tag="VFN38_14460"
     CDS             1014..>2040
                     /locus_tag="VFN38_14460"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HET9013025.1"
                     /translation="MTASLLQTGTFFFPGPTEVRPAVLAAMTQPMIPHRGAAFESLFV
                     RLQGALRTIFGTTRPVYVSSSSATGLMEAGVRCAPPGRILSVVNGAFSARFAAIAQGC
                     ARDTDVLEVPWGQTVDLDQLADRLRRTRYAAVTIVHSETSTGALQDVRGATRLAREQG
                     AVCLVDSVTGIGGAELHFDAWELDYALTGSQKALALPPGLAFAAASESFIAAARGTPG
                     RGLYFDLVEFDAYALKGQTPNTPAIPLFYAADAQLAAIVAEGMQARWARHAAMASRTY
                     EWVDRLRARHGDAFRVLARDGHRSPTVTSVTLPDSLPSSTLLKAVKERGFTIGSGYGK
                     NKETTVRV"
BASE COUNT          272 a          731 c          741 g          296 t
ORIGIN      
        1 ggtctccacc gactgggcgg tgccctatcc gcacctggcc cgcgcgatcg cgaaggcgcg
       61 cgcgctggcg gacgaggcgc aggtgccgca ggccgtgacg tacgggcacg ccggcaacgg
      121 tcatccgcac cagaacttca tcgcccacga cgccgacgag ctcgcgcgca tcgagcgcgt
      181 ggtggaggcg acgctgcgcg aggtcatcgc cctcggcggc accgtcgcgg cggagcacgg
      241 gatcggaaag ctcaagcgga agtggctccc gctccagatg tcgccactcc aggtgcgcac
      301 gatgcaggcg gtgaagcgcg agctggatcc cgccggcatc ctcgcgccgg ggaacgtcct
      361 gtgagcgccg acgcgcgcgg cttcgccagc gtcgtgctcg acgtggatag cacgctctgc
      421 ggcgtggagg ggatcgactg gctcgccgcg ttgcgcgggt cggccgtggg cgcgaaggtg
      481 acggagctga ccgaccaggc gatgcgcgga aggatcaagc tcgatgcggt ctacggcgag
      541 cgcctggcgc tcgtgcaccc gacgcgcgac gaggtggaga tgctcgcggg cctgtacgcc
      601 tcgtcgctgg cgccgggagc ggcgcgcgcc atccggcgca tgcgcgatgc cggacgacgc
      661 gtcgtgctcg tgagcggcgg cgtgcgggac gccattctcc cggtggcccg gaagctcggc
      721 ctgggcgacg aggacgttca cgccgtgtcg ctccagttcg atgcggacgg tgcctacgtc
      781 ggcttcgatg ccgcgtcgcc actcacgacg gccgtcggca agcggaccgt ggtcgaggcg
      841 ctcgcgctgc cgccgagggt gctcgccgtc ggcgacggcg cgacggacct tgcgattcga
      901 cccgtcgtcg aggcattcgc cgccttcacc ggcttcgtga cgcgccccgc cgtcgtgaac
      961 gacgccgacc atgtggtcgc atccttcgac cagctttcca ccctcgtgct cgcatgaccg
     1021 cctcgctgct gcagaccgga accttcttct ttcccggccc caccgaagtg cgcccggcgg
     1081 tgctcgccgc gatgacgcag ccgatgatcc cgcatcgcgg cgccgccttc gagtcgctgt
     1141 tcgtgcggct gcagggcgcg ttgcgcacga tcttcggcac gacgcggccg gtgtacgtga
     1201 gcagctcgtc ggccacgggg ctcatggagg ccggcgtccg ctgcgctcca ccggggcgca
     1261 tcctctccgt cgtgaacggc gctttctcgg cccgcttcgc cgccatcgcg cagggatgcg
     1321 cccgggacac cgacgtcctc gaggtgccgt ggggccagac ggtggatctc gaccagctcg
     1381 ccgaccgcct gcggcgcacc cgctacgcgg cggtgacgat cgtgcactcg gagacgtcga
     1441 ccggcgccct ccaggacgtc cgcggggcca cgcggctggc acgcgagcag ggcgcggtgt
     1501 gcctcgtcga ttcggtgacg gggatcggcg gcgccgagct gcacttcgac gcgtgggagc
     1561 tggactacgc gctcaccggc tcgcagaagg cgctcgcgct gcctccgggc ctcgcgttcg
     1621 ccgccgcgtc ggaatcgttc atcgccgcgg cccgcggaac gcccggccgg gggctgtact
     1681 tcgatctcgt ggagttcgac gcatatgccc tgaagggaca gacgccgaac actccggcca
     1741 tcccgctctt ctacgccgcg gacgcgcagc tcgccgcgat cgtcgccgag ggcatgcagg
     1801 cgagatgggc gcggcacgcc gccatggcgt cgcggaccta cgagtgggtg gatcggctgc
     1861 gcgcgcgcca cggcgacgcg ttccgcgtgc tggcccgcga cggccaccgt tcgccgacgg
     1921 tcacgagcgt gacgctgccg gactccctgc cgtcgtccac gctgctcaag gcggtgaagg
     1981 aacgcggctt caccatcggg agcggctacg gcaagaacaa ggagaccacc gtacgcgtgg
//
LOCUS       DASSYW010000913         2345 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1795967, whole genome shotgun sequence.
ACCESSION   DASSYW010000913 DASSYW010000000
VERSION     DASSYW010000913.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2345)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2345)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2345
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1795967"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            60..1439
                     /locus_tag="VFN38_14465"
     CDS             60..1439
                     /locus_tag="VFN38_14465"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HET9013026.1"
                     /translation="MTARPLRTARAAAAVMLLAIAAACAAKKPELPPPSASPRYPEFI
                     FPAALATLGTPAAHERHQAGWLWLQAGDLKAAERNFDAALGLSGDFYPAEAGLGYVQL
                     ARKSHESALDHFDRAVVANPRYVPALAGRGEALLALGEREKALASFEAAVTADPGLDA
                     LRTRIAVLRARGQQDDVAAARKAVDGGRLDEARSAYERAIVASPDSPFLYRELADLER
                     RQGQLDAAARQAAKAAELDPTDARAQLLLGEIHEARKDLAAAIAAYEASLKLEPNPMV
                     ERKLDVVREAAVLATMPAEFLQIESAPAVSREQLAALVGVRLDDLLRRMQRRAAVVIT
                     DTRGSWASPWILAVTRAGVMEVYPNHTFQPAAEVRRGELADAASRILSIIAAEKPAAA
                     AAWRGTKPQFPDLAPTHLSYPAASLSVGAGVLQPLPDGSFQLARPVTGAEAVAAVRKL
                     EELAESSVR"
     gene            1436..1993
                     /locus_tag="VFN38_14470"
     CDS             1436..1993
                     /locus_tag="VFN38_14470"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: protein motif:HMM:NF013250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HET9013027.1"
                     /translation="MTLARNLTAANQLTILRMLIIPAFVILLLYGHNGWALVAFFVAG
                     LTDLFDGLIARLAGQKTTLGAWLDPMADKLLLVTMFVMLTLPGLGLANRLPLWFTVLV
                     ISRDVAIVLTVAVVNLAVGPRTFRPSIYGKIATATYVLTGVVALYFNYLGRPSLVVVA
                     FVYASLVITIVSAFHYGMQIVKLGH"
     gene            complement(2007..>2345)
                     /locus_tag="VFN38_14475"
     CDS             complement(2007..>2345)
                     /locus_tag="VFN38_14475"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HET9013028.1"
                     /translation="GEDITIFGSGKQTRSFCYVTDLVEGVLRLLESNINDPVNIGNPH
                     EMTIEEIAREIVRLTGSPSQLVYKPLPEDDPKVRQPDITRARTLLGWEPKVGLEEGLR
                     KTLDYFRSKI"
BASE COUNT          336 a          825 c          799 g          385 t
ORIGIN      
        1 atcgaggcgg agctgccgcg ccgggtgatt gggcggtttc aggatgcggc ggtgcagtca
       61 tgacggcgcg tccgctgcgc acggctcgag ccgccgcggc cgtgatgctg ctggcgattg
      121 ccgcggcctg cgccgcgaag aaaccggagc tgccgccccc cagtgcgtcg cccaggtacc
      181 cggaattcat ctttcctgcc gcgctcgcaa cgctcgggac gccggcggca cacgagcgcc
      241 accaggcggg atggctctgg ctccaggccg gtgacctcaa agcggcggag cggaacttcg
      301 acgccgcgct cgggctttcg ggcgatttct atcccgccga ggccgggctg ggttacgtcc
      361 agctcgccag gaaatcgcac gagtcggcgc tcgatcactt tgaccgcgcc gtcgtcgcga
      421 acccgcgcta cgtgccggcg ctcgcgggga ggggagaggc gctgctcgcg ctcggcgagc
      481 gcgagaaggc gctcgcgagc ttcgaagccg ccgtcacggc cgatccgggc ctcgacgccc
      541 tgcgcacgcg aattgcggtg ttgcgggcgc gcgggcagca ggacgatgtc gcggcggcgc
      601 ggaaggcggt ggacggcgga cgtctcgacg aagcacggtc ggcgtacgag cgcgcgatcg
      661 tcgcgtcgcc ggacagcccg ttcctctatc gcgagctcgc ggacctggag cgccgccagg
      721 gccagctcga cgcggcggca cggcaggccg cgaaagcggc ggagctcgat cccaccgacg
      781 ctcgagcgca gctgctgctc ggagagatcc acgaggcgcg caaggacctg gccgcggcca
      841 ttgccgcgta cgaagcgtcg ctcaagctcg agcccaatcc gatggtggag cgcaagctgg
      901 acgtcgtgcg tgaagcggcc gtcctcgcga cgatgccggc cgagttcctg caaatcgaat
      961 ccgcgcccgc ggtctcgcgc gagcagctcg ctgcgctcgt cggcgtgcgc ctcgacgatc
     1021 tgttacgccg catgcagcgc cgcgcggccg tcgtcatcac tgacacgcgc ggcagctggg
     1081 ccagcccgtg gatcctcgcc gtcacgcgcg ccggggtgat ggaggtgtac ccgaaccaca
     1141 ccttccagcc ggcggccgag gtccggcgcg gcgaactggc ggacgccgcc agccggattc
     1201 tgtcgatcat cgccgccgag aagccggccg ccgcggcggc ctggcgcggc acgaagcctc
     1261 agttccccga cctcgcgccc acgcatctca gctacccggc cgcgtcgctg tccgtcggcg
     1321 cgggcgtgct gcagccgctg ccggacggat cgttccagct cgcgaggccc gtgaccggcg
     1381 ccgaagccgt cgccgcggtc aggaagctcg aggagctcgc cgagtccagc gtgcgatgac
     1441 gcttgcgagg aacctcaccg ccgcgaatca gctgacgatt ctgcgaatgc tgatcatccc
     1501 ggcattcgtc atcctgcttc tctacggcca caacggctgg gcgctcgtcg cgttcttcgt
     1561 cgccggcctc accgacctct tcgacggcct gatcgcgcgc ctggcggggc agaagaccac
     1621 cctcggcgcg tggctcgacc cgatggccga caagctgctg ctggtgacga tgttcgtgat
     1681 gttgacgctg cccgggctgg ggctggcgaa ccgcctgccg ctctggttta ccgtgctcgt
     1741 gatcagccgc gacgtcgcca tcgttctgac cgtggccgtc gtcaacctcg ccgtcggacc
     1801 gcggacgttc cggccgtcga tctacggcaa gatcgccacg gccacctacg tgctcaccgg
     1861 cgtcgtggcg ctctacttca actatctcgg gcggccgtcg ctggtggtgg tggcattcgt
     1921 gtatgcgtcg ctcgtcatca cgatcgtttc agccttccac tacggcatgc agatcgtgaa
     1981 gctcgggcac tgacgcgccc ggccgcctag atcttcgaac ggaagtagtc gagcgtcttc
     2041 cgcaaccctt cttccaggcc gactttcggc tcccagccca gaagcgtgcg cgcacgcgtg
     2101 atgtccggct gacgcacctt cgggtcgtcc tcgggcagcg gtttgtagac cagctggctc
     2161 ggcgatccgg tgaggcgcac gatctcccgc gcgatctcct cgatcgtcat ctcgtgcggg
     2221 ttgccgatat tcacaggatc gttgatgttc gactcgagca aacggaggac gccctcgacg
     2281 aggtccgtca cgtagcagaa actgcgcgtc tgcttgccgc tgccgaagat cgtgatgtct
     2341 tcccc
//
LOCUS       DASSYW010000914         2864 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1321277, whole genome shotgun sequence.
ACCESSION   DASSYW010000914 DASSYW010000000
VERSION     DASSYW010000914.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2864)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2864)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2864
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1321277"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1291)
                     /locus_tag="VFN38_14480"
     CDS             complement(<1..1291)
                     /locus_tag="VFN38_14480"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HET9013029.1"
                     /translation="MFAVVHAVLLRPLPFAQPDRLVAIAPTSFFSGADAQFLRDRART
                     LADVASSSPGWRMSLLGVGDPVQIVAARPTVNLLAMLGVRPVLGRLFDGDDDAAGRRA
                     VILSHRLWQDRFGADPSVIGRTVMLDGAMREIVGVVGPDASVLDEAADAWVPFDAGSS
                     FARGRSSLIYARLRPEADHDAATREAQVLLAQLARETDLRIDPAHTARAVPLAEVILG
                     DVRSPLLFVTVAVGILIVLTSANVGTLLLGRSVARRRDAAVRAALGASRVRLARETLI
                     ENLLLAAVGSLLGLVLARLTQSTLVGLLPGEMPRLADVAISPAVIATVVIATVGAVLL
                     LGVTPVLMTSRTTAQPLLRQGAHTDGGGGRCALDTLVVAQVALAIVLGLAAALMGRSL
                     WRLQHVDPGFSAESVLTLRVQPAGERYRGPGRMLAYYR"
     gene            complement(1433..1924)
                     /locus_tag="VFN38_14485"
     CDS             complement(1433..1924)
                     /locus_tag="VFN38_14485"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HET9013030.1"
                     /translation="MQRLLTEIDPDLPVYNVRTMEQHIHSSVFGLMPLRMGASMAAVQ
                     GFIGLFLAVMGLYAVVSYAVSRRTREIGVRLALGANHTDVVRLVVREGMRLSLIGIAI
                     GIVMALAIGFVLSRVLYGLTAVDATVFGGVTALLLVISGLACYLPARRATRVDPLVAL
                     RYE"
     gene            complement(2042..>2864)
                     /locus_tag="VFN38_14490"
     CDS             complement(2042..>2864)
                     /locus_tag="VFN38_14490"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HET9013031.1"
                     /translation="LAAVAGALGIVLAHWGGQALAAFAPAGDIPINTERPWDWRVYAF
                     TFGVSVIAGLAAGLWPARTATRFDLVQSLKDGGRIGGTSRHALRNLLVIGQVTMSVVV
                     LVSAGLFLHSLRQMQHLALGFRPDGLLMMSVDLGLQQYDDTRGRRFLESVLSRAEALP
                     GVRSATLAVHVPFDYGIQITDVAIDGPIPGSKDDYLSSAFNVVGPKFFETTGATLTRG
                     RVFASSDDERSRPVAIVNETMARKLWPGEDPIGRRFRFGRDGDWIETIGVARDGK"
BASE COUNT          525 a          990 c          994 g          355 t
ORIGIN      
        1 cgcggtaata ggcgagcatg cgaccagggc ccctgtagcg ctcccccgcc ggctgcacac
       61 ggagggtcag aacggactcc gccgaaaagc cgggatcgac gtgctgcagc cgccagagcg
      121 atcggcccat caacgccgcc gccagcccca gcacgatggc gagggcgacc tgcgcgacga
      181 cgagcgtgtc gagcgcgcag cgccctccgc ctccgtcggt atgcgcgccc tggcgcagca
      241 gcggctgagc ggtggtgcgg gacgtcatca gcacgggcgt gacgccgagc aacagcacgg
      301 cgccgaccgt ggcgatgacg accgttgcga ttaccgcagg gctgatggcg acgtcggcga
      361 gccggggcat ctcgcccggc aacaggccga cgagcgtcga ttgcgtaagc cgcgccagga
      421 cgagacccag caggctgcca acggccgcca gcaggaggtt ttcaatcagg gtctcgcgcg
      481 cgagccgcac gcgggacgcg ccgagcgccg cacggaccgc agcgtcgcgg cgcctcgcga
      541 cgctccgtcc gagcaggagc gtgccgacgt tcgccgacgt cagcacgatc aggatgccga
      601 cggcgacggt cacgaacagc agcggcgatc gaacgtcgcc gagtatgacc tcggccagcg
      661 gcacggcccg cgccgtgtgc gcggggtcga tccgcagatc cgtctcgcgc gccagctgcg
      721 ccaggagtac ctgcgcctca cgcgtcgcag catcgtggtc cgcttccggg cgaagccgcg
      781 cgtagatcag cgacgatcgg ccgcgcgcaa acgaggaccc ggcgtcaaag ggcacccaag
      841 cgtcggcagc ctcgtcgagc acgctggcgt ccggccccac cacgcccacg atctcgcgca
      901 tcgcaccgtc cagcatgacc gtgcgcccga tcacggacgg gtcggcgccg aaccggtcct
      961 gccacaggcg gtgcgacagg atcaccgctc gccggccggc agcgtcatcg tccccgtcga
     1021 acaaacgccc gagcacgggg cgcacgccga gcatcgcgag caggttgacc gtcgggcgcg
     1081 cggcgacaat ctggaccgga tcccccacgc cgaggagcga catgcgccag cccggcgacg
     1141 agctggccac atcagccagc gtgcgcgccc ggtcgcgcag gaactgtgca tcggcgcctg
     1201 agaagaagct ggtcggcgca atcgcgacga ggcggtcggg ctgcgcgaag ggcagggggc
     1261 gcagcagcac ggcatggacg acggcgaaca ccgagccgct ggcgacggcg ccgagcgcga
     1321 tgatcaggat gacgagagcg gcgaaggagg gttgacggcg gagggcgcgc agcgcgagac
     1381 ggacgtcctg cagcatgggc gtttggacgt tgcagcccgg cgggcggtta gctcactcgt
     1441 agcgcaacgc gacgagcggg tccacccgtg tcgcccgccg cgccgggagg tagcacgcga
     1501 gccctgatat gacgaggagc aacgcggtga cgccaccaaa cacggtcgca tccaccgccg
     1561 tgagcccata caggacccgc gacaggacga acccgatggc cagcgccatc acgatgccga
     1621 tggcgatgcc gatgagcgag aggcgcatgc cttcgcgcac gaccagccgc acgacgtcgg
     1681 tgtgattggc gccaagcgcc aggcgaacgc caatctcccg cgtccggcgg ctgaccgcgt
     1741 aggagacgac ggcatacagg cccatgaccg ccaggaacag gccgatgaat ccctggacgg
     1801 cggccatcga ggcacccatc cggagaggca tcaggccaaa cacactactg tggatgtgtt
     1861 gttccatcgt gcgaacgttg tacacgggca ggtctggatc gatttccgtg agcaggcgct
     1921 gcaacggcct ggccaacgcg gcgggctcgg acgccgattg cacgacgatc gtgactggcg
     1981 cgcggtactg ctgccacagc ggtacgtaaa agtacgcgcg cggttcttct ccgagcatca
     2041 cttactttcc gtcgcgcgcg acgccgatgg tttcgatcca gtcgccgtca cggccgaatc
     2101 gaaatcggcg gccgatcggg tcctcgcccg gccacagctt ccgggccatc gtctcgttca
     2161 cgatcgcgac gggccgcgaa cgctcgtcat cgctcgacgc aaagacgcga ccgcgcgtca
     2221 gggtggcgcc ggtcgtttcg aagaacttcg gtccgacgac gttgaaggcc gaggagagat
     2281 agtcgtcctt ggagcctgga atcggtccgt caatggcaac gtcggtgatt tgaatcccgt
     2341 agtcgaacgg cacgtgcaca gccagggtgg ccgagcggac gccgggcagc gcttcggcgc
     2401 ggctcaaaac tgattccaga aagcgccggc cgcgggtgtc gtcgtactgc tgcagcccga
     2461 ggtccaccga catcatgagg aggccgtcgg gcctgaaccc gagcgcgaga tgctgcatct
     2521 gccgcaggct gtgcaggaac aggccggcgc tgacgagcac gacgaccgac atcgtgacct
     2581 gaccgatcac cagcaggttg cgcagcgcgt ggcgcgacgt cccgccgatc cggccgccat
     2641 ccttcaacga ttgcacgagg tcgaatcgtg tcgccgtgcg cgccggccag agtccggccg
     2701 cgagtccggc aatcaccgac acgccgaacg tgaacgcgta cacgcgccaa tcccacgggc
     2761 gctcggtatt gatcgggatg tctcccgcgg gtgcgaaggc ggccagcgcc tgaccgcccc
     2821 aatgcgcgag cacgataccg agggcacccg ccacggccgc cagc
//
LOCUS       DASSYW010000915         5784 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1317346, whole genome shotgun sequence.
ACCESSION   DASSYW010000915 DASSYW010000000
VERSION     DASSYW010000915.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 5784)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5784)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5784
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1317346"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1022)
                     /locus_tag="VFN38_14495"
     CDS             complement(<1..1022)
                     /locus_tag="VFN38_14495"
                     /inference="COORDINATES: protein motif:HMM:NF014090.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005384 - manganese ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0030026 - intracellular manganese ion
                     homeostasis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="VIT1/CCC1 transporter family protein"
                     /protein_id="HET9013032.1"
                     /translation="MATTSAPATPGGVPDLDSFHHHWQDEADAAYLYRVLSDSESDAQ
                     KKDIYRRLAEVEDRHLEIWSALLAKHGRSPGRHRPTARTRLLAFLGRRFGPGFLLPML
                     LAEEGREVKAYLDMHRTTGRGVAGRDEALVLAKESAEHATTLNGIAGRTGEPWHKTGA
                     GGFLRNVVYGFNDGLTANFGLVAGVLGATVTSTETYHHVIVAGVAGLIADALSMGSSG
                     YLAAQSEREVYAHEIAMERDEIALMPEIERDELALIYEAKGMDRDSAFRIATQVMADP
                     EKMLAEQVQEELGIAESATSPMREAWLTGTATAIGALIPVFPFFVFTGTTAIALSFTL
                     AMASHFL"
     gene            1165..2277
                     /locus_tag="VFN38_14500"
     CDS             1165..2277
                     /locus_tag="VFN38_14500"
                     /inference="COORDINATES: protein motif:HMM:NF024578.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HET9013033.1"
                     /translation="MRRTHLLTLAATAALSSLPAGAQDVQILRSPRARVEAGFDDANR
                     AAIGISTTATGTLRDTLGLMITMVTRGGPAERAGIEEGNRIQAINGVNLRANAADIED
                     AELSGSLSRRLTRELSKAKPGDEVELRVYREGRAQAIRVKTVDADSLFRRGSSFRLTR
                     ADADDRPALGLSIQSSGSRRDTLGVLIVSVGDSTPAERAGLEEGTRIAAINGVNLRVA
                     REDAGDGWASSAKAQRLQRELAQLKPGSDATLRVYSNGQFRDVRVKVARAGDLPRRSR
                     TWFGGMGAIAPMPPMPPMPPMPAMPRVQSYPMGSFHMELGPELEAGLHEAGVQLERIR
                     PQLDNLLRDLPAALENIRIPNISVDVSAPRVRTVSM"
     gene            complement(3024..4949)
                     /locus_tag="VFN38_14505"
     CDS             complement(3024..4949)
                     /locus_tag="VFN38_14505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium transporter Kup"
                     /protein_id="HET9013034.1"
                     /translation="MSPLETGSFPIEPHAHARPQGKRLALLTLTALGVVYGDIGTSPL
                     YALRECFKAEYGIHPTTDSVLGVLSLILWSLILVVSVKYIVFILRADNRGEGGILALL
                     ALLLQHKRRADDKRRRLALIALGLFGAALLYGDGVITPAISVLGAVEGLEVGAPGLAR
                     IVVPITLLILFALFMVQRFGTARVGTAFGPTMLLWFITIGALGLRSVAENPQVLAAIN
                     PWYGLRFFFEHGMAGFLTLGAVVLCVTGGEALYADMGHFGKRPIRIAWFAVALPALLL
                     NYFGQGALLLRDPRAASNPFYLLAPASFQWPLLVIATAAAIVASQALISGAFSLTQQS
                     IQLGYSPRMQIIHTSHHEAGQIYIPEVNKALMVGCLILVVWFGNSSALSAAYGIAVTG
                     TMAITSLLFAVVARMRWNWSLPHVILITAAFLLIDLSFLVANVVKIEHGGWVPLVMAV
                     GVYTLMSTWKRGRTELGNIQASNALPLDTFLTSIERNPPVRVRGTAVFMTSTPEGVPV
                     VLLHHLKHNKVLHETIVLLSVQTRGIPEVGADHHLTFEPMGQGFFRVVANYGFMQSPN
                     IPEVLAEAAARGVAIPPMDTSYFLGRERLVLTGRAKMSRWRKRLFALMSRNARSATEF
                     FQIPPNRVVELGAQIEF"
     gene            complement(5063..5647)
                     /locus_tag="VFN38_14510"
     CDS             complement(5063..5647)
                     /locus_tag="VFN38_14510"
                     /inference="COORDINATES: protein motif:HMM:NF015513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HET9013035.1"
                     /translation="MFVHYGYCGPHGHRAKWGWDASFMNSFFGAEGRPRGRWRGGRMF
                     EQGDLRYVVLRLLEEKPRHGYEIIKALEERFGGTYAPSPGVVYPTLQLLEDLGYARIV
                     PADEGKKTYEITDAGRAYLAENRDTVDSIFERISTLMGHFLDEPMTEVHRAFRKAGKA
                     TYGRATDAVQSPAVLKQIVDILERAAKEIDAIPR"
BASE COUNT          913 a         1975 c         2015 g          881 t
ORIGIN      
        1 aggaagtgcg acgccatcgc cagcgtgaag ctgagcgcga tcgccgtcgt ccccgtgaag
       61 acgaagaagg gaaagaccgg gatcagtgcg ccgatcgccg tcgccgtccc cgtcagccac
      121 gcctcgcgca tcggcgacgt cgccgactcc gcgatgccga gctcctcctg cacctgctcg
      181 gcgagcatct tctccggatc ggccatcacc tgtgtggcga tgcggaacgc cgagtcgcgg
      241 tccatcccct tcgcctcgta gatcagcgcc agctcgtcgc gctcgatctc gggcatcagc
      301 gcgatctcgt cgcgctccat cgcgatctcg tgtgcgtaca cctcgcgctc gctctgcgcc
      361 gcgagatatc cgctcgagcc catggaaagc gcgtcggcga tgagcccggc gacgccggcg
      421 acgatcacgt ggtgatacgt ctccgtgctc gtgaccgtgg cgcccagcac gcccgccacg
      481 aggccgaagt tggcggtgag cccgtcgttg aagccgtaca cgacgttgcg caggaatccg
      541 cccgcgcccg tcttgtgcca cggctcgccg gtgcgacccg caatgccgtt gagtgtcgtg
      601 gcgtgctcgg ccgattcctt cgccaggacg agcgcttcgt cgcgccccgc cacgccgcgc
      661 cccgtggtgc ggtgcatgtc gaggtacgcc ttgacctcgc gcccctcctc ggccagcagc
      721 atggggagca ggaagcccgg cccgaaccgg cgtcccagga aggcgagcag acgcgtgcgc
      781 gccgtgggcc gatggcggcc gggcgagcgc ccatgcttcg ccagcagcgc cgaccagatc
      841 tcgagatgcc ggtcctcgac ttcggcgaga cgacggtaga tgtccttctt ctgcgcgtcc
      901 gactccgagt cggacagcac gcgatacagg tatgccgcgt cggcctcgtc ctgccagtgg
      961 tggtggaacg agtcgaggtc gggaacgccg cccggcgtgg cgggagcgga tgtcgtggcc
     1021 atggagggaa tataccgccg cccgaatgcg cggaggcccc gggcgggcca ccgcgccatc
     1081 gggctccggg tccacgacaa ccttttcccg gctcggccgt gtcagacgtg caaccgaccc
     1141 cccgtacccc cagaggctct caccatgcga cgcactcatc tactgactct cgccgccacg
     1201 gcggcgcttt cctccctgcc ggctggcgcg caggacgttc agatcctgcg cagtccgcgc
     1261 gcccgcgtcg aggcgggatt cgacgacgcg aaccgggcgg cgatcggcat cagcaccacg
     1321 gccaccggta cgctgcgcga cacgctcggc ctgatgatca cgatggtcac gcgcggcggt
     1381 cccgcggagc gcgcggggat cgaggaaggg aatcgcatcc aggcgatcaa cggcgtgaac
     1441 ctacgcgcca acgcggcgga catcgaggac gccgagctct ccggctccct ctcgcgtcgc
     1501 ctcacccgcg agctgtccaa ggccaagccc ggcgacgagg tggagctgcg cgtctatcgc
     1561 gaaggacgcg cccaggcgat tcgcgtgaag acggtggatg cggactcgct cttccgtcgt
     1621 ggctcctcgt tccgcctcac gcgcgccgac gccgatgatc ggccggcgct ggggctgagc
     1681 atccagagca gcggcagccg gcgcgacacc ctcggggtgc tcatcgtctc ggtgggcgac
     1741 tcgacgccgg ccgagcgcgc cgggctcgag gaaggcactc gcatcgcggc gatcaacggg
     1801 gtgaacctgc gcgtcgcgcg tgaagacgcc ggcgatggct gggccagcag cgccaaggcg
     1861 cagcggctgc agcgcgagct cgcgcagctc aagccgggca gcgatgcgac gctgcgcgtc
     1921 tactccaacg gccagttccg cgacgtgcgg gtgaaggtgg cgcgcgccgg agacctgccg
     1981 cggcgcagcc gcacctggtt cggcgggatg ggcgcgatcg cgcccatgcc cccgatgccc
     2041 cccatgccgc cgatgccggc catgccgcgc gtgcagagct atccgatggg gtcgttccac
     2101 atggagctcg gtcccgagct cgaggcgggg ctgcacgagg ccggcgtcca gctcgagcgc
     2161 attcgtccgc agctcgacaa cctgctgcgc gatctgccgg cggcactcga gaacatccgc
     2221 atcccgaaca tcagcgtcga cgtctcggcg ccgcgggtga gaacggtgtc gatgtaacat
     2281 cggccgtgga aggatgacgg aaagggcaca tcgggctcgg acggtgtgcc ctcgctcgtt
     2341 tccggatcga cgtccggata acgacgggac ggcctggatc gtcaaggcac cgatgaatgc
     2401 cgacatgcac gactcgaagc cgggcgtgga ggtcgccgtc gcgtcgctgg cgtcggtggc
     2461 cgtgatcgcg accgcctgga agatcgcgtg gggcaacgcg atcctggtgc tggggccagc
     2521 cggagcatcg gggttcgccg tatggcatcc gctcctgctc gcggcgccct atctcacgat
     2581 cgccctgctt ggcctgcggg ctgcgtcccg ggcgttcgcg ttcgcgctgg cgcgaggcgt
     2641 ggcgacggcc actggcgtcg ggatcatcgc gtgggccctg atcgcgctgc cgggtgccgt
     2701 gctcacgctg ctgcacccca gcttcatgat cgaaagcggg ctgatctcga tcgtcatggc
     2761 gtcacgcgtg gtgcacgtgc tccttgccgg tcgcgacatc ctgcttctcg ccacgctctt
     2821 cgtgctgcag ctgcttctgg cgatgctggc gctgcgggac ggggcccgcg cgcaccatcc
     2881 agcccgggct ggctatctgg tcggactgct cacgctcgcg cttccgatcc tgatcggcct
     2941 cgacatccgc caccggctga cggacgcgca gcgtcgcgcc atggagcgtt ccgccgccga
     3001 ggcgcgacgg acacgggccg gcgtcagaac tcgatctgcg cccccagctc caccacgcga
     3061 ttcggcggaa tctggaagaa ctccgtggcc gagcgcgcat tgcgcgacat cagagcgaag
     3121 agtcgcttcc gccagcgtga catcttggcg cgtcccgtga gcacgagccg ctcgcggccg
     3181 aggaagtacg acgtgtccat gggcgggatg gcgacgcccc gcgcggcggc ctcggcgagc
     3241 acctcgggga tgttcggcga ctgcatgaac ccgtagttcg ccacgacgcg gaagaagccc
     3301 tggcccatcg gctcgaaggt gagatgatgg tcggcgccca cttccgggat gccgcgggtc
     3361 tgcacgctga ggagcacgat cgtctcgtgc agcaccttgt tgtgcttcag gtggtgcagc
     3421 agcaccaccg gcacgccctc cggcgtggac gtcatgaaca cggccgtgcc ccgcacgcgc
     3481 accggcgggt tccgctcgat gctggtaagg aacgtgtcga gggggagcgc gttggacgcc
     3541 tggatgttgc cgagctccgt gcggccccgc ttccaggtgc tcatcagcgt gtacacgccg
     3601 accgccatca cgagcggcac ccagccgcca tgctcgatct tcaccacgtt ggcgacgagg
     3661 aacgacaggt cgatgagcag gaaggccgcc gtgatgagga tgacgtgcgg cagcgaccag
     3721 ttccaccgca tccgcgccac gacggcgaac agaagcgacg tgatggccat cgtgccggtg
     3781 acggcgatgc cgtatgcggc gctgagcgcg ctcgagttgc cgaaccagac gacgaggatc
     3841 aggcagccga ccatcagcgc cttgttcacc tcggggatat agatctgccc cgcctcgtgg
     3901 tgcgacgtgt ggatgatctg catgcgcggc gagtagccga gctggatgct ctgctgcgtg
     3961 agggagaacg cgccggagat gagcgcctgc gaggcgacga tggcggcggc ggtggcgatc
     4021 acgaggagcg gccactgaaa cgacgccggc gccagcaggt agaagggatt gctcgcggcg
     4081 cgcgggtcgc ggagcagcag cgcgccctgt ccgaagtagt tgagcagcag ggcagggagc
     4141 gccacggcga accaggcgat gcggatggga cgcttcccga agtgccccat gtccgcatag
     4201 agcgcctcgc cgccggtgac gcagagcacc accgcgccca gcgtcaggaa gccggccatg
     4261 ccgtgctcga agaagaagcg cagcccgtac cacggattga tcgcggccag cacctgggga
     4321 ttctccgcca ccgatcgcag cccgagcgca ccgatggtga tgaaccagag gagcatcgtg
     4381 gggccgaacg ccgtgccgac gcgcgccgtg ccgaagcgct gcaccatgaa cagcgcgaag
     4441 aggatgagga gggtgatcgg taccacgatg cgggccagcc cgggtgctcc cacctcgagc
     4501 ccctccaccg cgcccagtac ggagatggcg ggggtgatca cgccgtcgcc gtacaggaga
     4561 gcggcgccga acagtcccag cgcgatcagg gcgagccggc gtcgcttgtc gtcggcccgt
     4621 cgcttgtgct gcagcagcag ggcgaggagg gccaggatgc ccccctcgcc ccggttgtcc
     4681 gcccgcagga tgaagacgat gtacttgacg ctgaccacga ggatcagcga ccacaggatc
     4741 agcgacagga cgccgaggac gctgtcggtg gtagggtgga tcccgtactc cgccttgaag
     4801 cactcgcgga gcgcatagag gggactcgtg ccgatgtcgc cgtagacgac gcccagcgcg
     4861 gtcagggtga gcagcgcgag tcgcttgccc tgcgggcgag cgtgcgcgtg cggctctatc
     4921 gggaagcttc cggtttcgag cggagacatc tcgttgcgat gggtggcgga ctgcggcgcc
     4981 ggccaacggc gcgggccgga gacgcgaacg cccccggccc ggttggaaca tacgcagtcg
     5041 gcggcaatcc cgcagacgcc gttcagcgcg gaatcgcgtc gatctccttc gccgcgcgct
     5101 cgaggatgtc gacgatctgc ttgagcacgg ccgggctctg cacggcgtcc gtggccctcc
     5161 cataggtcgc cttgcccgcc ttccggaagg cccgatggac ctccgtcatg ggctcgtcca
     5221 ggaagtggcc catgagagtg ctgatgcgct cgaagatgga gtccaccgtg tcacgattct
     5281 cggccagata ggcccgtccg gcgtcggtga tctcgtaggt cttcttcccc tcgtctgcgg
     5341 ggacgatccg cgcgtagccg aggtcctcca ggagctgaag cgtggggtag acgacccccg
     5401 ggctgggggc gtaggtgccg ccgaaccgct cctcgagcgc cttgatgatc tcgtagccgt
     5461 ggcggggctt ctcctcgaga agccgcagaa cgacgtagcg caggtcgccc tgctcgaaca
     5521 tccgtcctcc gcgccagcgg ccgcgtggcc gcccctcggc gccgaagaag ctgttcatga
     5581 agctggcgtc ccacccccac ttggcccggt ggccgtgcgg cccgcagtag ccgtagtgaa
     5641 cgaacatggt gccctccgcc gcaacgcggc gatcagcgtg ttccggcaag atatatctca
     5701 cgatataact ttgtccagat ccgcgatgaa ggcttggttg ttttcgcggc actgccgtgc
     5761 cgcatgagcg ctgaaggcgc gagt
//
LOCUS       DASSYW010000916         2315 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_930121, whole genome shotgun sequence.
ACCESSION   DASSYW010000916 DASSYW010000000
VERSION     DASSYW010000916.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2315)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2315)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2315
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_930121"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..422)
                     /locus_tag="VFN38_14515"
     CDS             complement(<1..422)
                     /locus_tag="VFN38_14515"
                     /inference="COORDINATES: protein motif:HMM:NF025092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HET9013036.1"
                     /translation="MLLAGTASAQSGVIAGTVVSAASGAGVPAVTVMIPGTTLGTTTD
                     ANGRFRLGGLSGTSTALEVRRIGYRPLRQTVTVGTMNLRFAITEQSVALDEVVVTGTV
                     GGQARREIGNAVSTVNATEVTERGTINNVQQLLNGRSPG"
     gene            complement(737..>2315)
                     /locus_tag="VFN38_14520"
     CDS             complement(737..>2315)
                     /locus_tag="VFN38_14520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013037.1"
                     /translation="WNTPFFISPHNPSVFYAGASKVLKSTSRGDNLTPISPDLTTRDP
                     MKIRVSTKTTGGITPDNTGAETHSTITALAESPVRAGLLYAGTDDGNVWLSRNDGATW
                     ESLTARFAGVPKNSWVSRIEPSPSDSSVFYVAFDAHRTNDLDPYLFMTSDYGRTFRSI
                     VANLPRGGPDFVHVIREDPHNEKLLFVGTDVGAYVSVDRGGSWRKFMTGLPTVPVHDL
                     KIHPRDHELIAGTHGRSIWIVDIAPLEQLTDSVRARSVALFAPKVAYQYGQRTVEGQA
                     TGHKVFEAPSPAYGADIWYRLSGGSRRDTVRIAITDASGDTIRTLNGPGGAGLHKVTW
                     DFRGKAPKAPPLTPAGVRDSIVQARRIAFVIDSLDKAGTLPKETLARLRTATAGGNVQ
                     GLGQLFGGGGGGRGQGGGAGGFNPRPGEGAPARGAAAAAAQGEGVSEAAVDPGQLGQL
                     AQLFRPAGGGGGFGGGRGGAPLVGTGDYLVTISAGGEKQKQLLHVERLPGGGASTGFG
                     GEEDDEEHDDRDAGIEP"
BASE COUNT          313 a          849 c          809 g          344 t
ORIGIN      
        1 cccggggagc ggccgttgag gagctgctgc acgttgttga tcgtgccgcg ctcggtgacc
       61 tcggtggcat tcaccgtgga caccgcgttg ccgatctcgc gccgcgcctg tccacccacc
      121 gttccggtga cgacgacctc gtccagcgcc accgactgct cggtgatcgc gaagcgcagg
      181 ttcatcgtgc ccacggtgac cgtctgccgc agcggacggt agccgatgcg ccgcacctcg
      241 agggcggtcg aggtgcccga gagcccgccg aggcggaagc gtccgttcgc gtcggtcgtc
      301 gtgccgagcg tggtgcccgg aatcatcacg gtcacggcgg gcaccccagc ccccgaggcg
      361 gcgctcacca ccgtgccggc gatcacgccg gattgcgccg acgcggtgcc cgcgagcagc
      421 acggccgcgc acgccgccag gatgagagtg aggccgcggc ggcgcggtgg agcgcttgcc
      481 ggggcgtgcg aaagagaggg tgatgtattc acggacgaca tgacacactc cggaaggagg
      541 aatgcgggaa cgctgacatc gggagagagg ggcgcaacgc ggcgggcagg gcgggcacgg
      601 ggccgctccg gcgagaaaat gaagggagga attcgcggtc gcaagacgag ggaaagcgcg
      661 aagcgccctt cggcttcacc tcgccggagg gcgcttcgtc actcgtcgcg gcttgcgacg
      721 cgtcatgcca cagcggtcag ggttcgatgc cggcgtcccg gtcgtcgtgc tcctcgtcgt
      781 cctcttcgcc gccgaacccg gtgctggcgc cgcctcccgg caggcgctcc acgtgcagca
      841 gctgcttctg cttctcgccg cccgcgctga tcgtcacgag atagtcgccg gtgccgacga
      901 gcggcgcacc gccgcgcccg ccaccgaagc cgcccccgcc gccggcaggg cggaagagct
      961 gcgcgagctg accgagctgc ccgggatcga ccgccgcctc gctcaccccc tcaccctgcg
     1021 ccgccgcggc cgccgcgccg cgcgccggcg cgccttcgcc cggtcgcgga ttgaagcccc
     1081 ccgcgccccc gccctggccc cgaccgccgc cgccgccgcc gaacagctga ccgagcccct
     1141 gcacgttgcc cccggccgtc gcggtgcgca gccgcgcgag cgtctccttc ggcagcgtgc
     1201 ccgccttgtc cagcgagtcg atgacgaacg cgatgcgccg cgcctgcacg atggaatcgc
     1261 gcacccccgc cggcgtgaga ggcggcgcct tgggcgcctt gccccggaaa tcccacgtca
     1321 ccttgtgcag tcccgcacca ccgggcccgt tgagcgtgcg gatcgtgtcg ccgctggcgt
     1381 cggtgatcgc gatgcgcacc gtgtcccgcc gcgagcctcc gctcaaccgg taccagatgt
     1441 cggcaccgta cgcggggctc ggcgcctcga acaccttgtg gccggtcgcc tgtccctcga
     1501 cggtccgctg cccgtactgg tacgccacct tcggcgcgaa cagcgccacg ctgcgcgcgc
     1561 gcacgctgtc cgtcagctgc tcgagcgggg cgatgtccac gatccagatc gagcgcccgt
     1621 gcgtcccggc gatcagctcg tgatcgcgcg gatggatctt caggtcgtgc accggcacgg
     1681 tgggcagccc ggtcatgaac ttccgccacg acccgccgcg gtccaccgac acgtaggccc
     1741 cgacgtcggt gcccacgaac agcagcttct cgttgtgcgg gtcctcgcgg atgacgtgca
     1801 cgaagtccgg accgccgcgg ggcaggttcg ccacgatgga ccggaaggtc cggccgtagt
     1861 cggacgtcat gaacaggtag gggtccaggt cgttcgtccg atgagcgtcg aacgcgacgt
     1921 agaacacgct gctgtccgac gggctcggct cgatccggct cacccagctg ttcttcggca
     1981 ccccggcaaa ccgggccgtc aggctctccc acgtcgcgcc gtcgttgcgc gacagccaca
     2041 cgttgccgtc gtcggtgccg gcgtacagca ggccggcccg caccggcgac tcggccagcg
     2101 ccgtgatcgt gctgtgcgtc tcggcgccgg tgttgtcggg cgtgatgccg cccgtcgtct
     2161 tcgtgctcac ccggatcttc atcgggtcgc gcgtcgtgag atcgggcgag atgggcgtga
     2221 ggttgtcgcc gcggctggtg ctcttcagca ccttgctcgc gcccgcgtag aacacgctcg
     2281 ggttgtgcgg cgagatgaag aagggggtgt tccag
//
LOCUS       DASSYW010000917         2056 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_340681, whole genome shotgun sequence.
ACCESSION   DASSYW010000917 DASSYW010000000
VERSION     DASSYW010000917.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2056)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2056)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2056
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_340681"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(7..1263)
                     /locus_tag="VFN38_14525"
     CDS             complement(7..1263)
                     /locus_tag="VFN38_14525"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HET9013038.1"
                     /translation="MALREGSTSSAGRSGAPRLTRNVLALGVVSFFTDISSEMIYPLL
                     PLFLATVLGGSVSMIGAIEGAAESTASLLKLASGWWSDRVRRRKPLVLGGYALAAFAR
                     PLVAFATSPLQVLAIRLTDRVGKGVRSSPRDALIADSVDPSIRGRAFGFHRAADHAGA
                     VVGPLVAFALLRWNHIELRTLFAFAALPGLLAVVVLALAVREVPASPVPRVDGRTRAA
                     ERDRSRSDASDPSPLGARFWTVLGVILLFTLGNSTDAFLLLRATQLGVPTALVPILWA
                     MLHVVKSASSTPGGALSDALGRKPLIVAGWMLYAAVYLAFGRATEAWQVWALFAVYGV
                     FFGLTEGSEKALVADLVPAARRGTAFGWYNLAIGLGALPASLLFGALWDRFGPAVAFS
                     FGAGLALAASAGMAIVAPGRPRIRAA"
     gene            1382..>2056
                     /locus_tag="VFN38_14530"
     CDS             1382..>2056
                     /locus_tag="VFN38_14530"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HET9013039.1"
                     /translation="MSAPYPSRTARLHAALADARAGLASRDEAIVRTQVTVSQIAAPT
                     GDERRRGAWVAERLAALGLEQVRMDDAGNVIGRRPGAPHCDPDAPVVLCAHLDTVFPA
                     GTPLDVRCDGSRLVGPGIGDNGRGLAAMLALAEALDGQRLRTMRPIEFVATTGEEGLG
                     DLRGAKHYFATAGSAASGMIALDGAGDERIVHRALGSRRFRVVFRGPGGHSWAAFGVP
                     NAVHAAA"
BASE COUNT          304 a          748 c          784 g          220 t
ORIGIN      
        1 caagcactag gcggcgcgaa tccgcgggcg tccgggcgcc acgatcgcca tcccggcgct
       61 cgcggccagc gcgagccccg cgccgaagct gaaggcgacg gccggaccga agcggtccca
      121 gagagcgccg aagaggagcg acgcggggag cgcgccgagc ccgatcgcga ggttgtacca
      181 gccgaacgcc gtgccgcgcc gcgccgccgg cacgaggtcc gccaccagcg ccttctcgct
      241 cccctcggtg agcccgaaga agacgccgta gacggcgaac agcgcccaca cctgccaggc
      301 ctcggtggcg cgcccgaagg cgaggtagac cgcggcatag agcatccagc cggcgacgat
      361 cagcggtttg cggccgagcg cgtcggagag cgcgccgccc ggcgtgctcg acgccgactt
      421 cacgacgtgc agcatcgccc agaggatcgg gacgagggcg gtcgggacgc cgagctgggt
      481 ggcgcgcagg agcaggaagg cgtcggtcga gttgccgagg gtgaagagga ggatgacgcc
      541 gagcacggtc cagaagcgcg cgccgagggg ggacggatcg ctcgcgtcgg aacgactccg
      601 atcacgctcg gcggctcgcg tcctcccgtc cacccgaggc acgggcgacg ccggcacctc
      661 gcgcaccgcc agggcgagca ccacgacggc cagcaggccg gggagcgcgg cgaacgcgaa
      721 gagcgtccgc agctcgatgt ggttccaccg caggagcgcg aaggcgacga gcggacccac
      781 gaccgccccc gcgtggtcgg ccgcgcgatg gaagccgaag gcgcggccgc ggatggacgg
      841 gtccaccgag tcggcgatca gcgcgtcgcg cggcgacgag cggaccccct tccccacccg
      901 gtcggtgagc cggatcgcca gcacctggag cggcgaggtc gcgaaggcga cgagggggcg
      961 cgcgaaggcg gcgagcgcgt agccgccgag gacgagtggc ttccgccggc gcacgcggtc
     1021 cgaccaccag ccgctggcca gcttgagcag tgaagcggtg gactccgccg ctccctcgat
     1081 cgcgccgatc atgctcacgc ttccgccgag cacggtggcc aggaagagcg ggagcagcgg
     1141 atagatcatc tcgctcgaga tgtccgtgaa gaagctcacc accccgagcg ccaggacgtt
     1201 gcgcgtcagg cgtggtgcgc cggagcgtcc cgccgacgac gtcgacccct cgcgcagcgc
     1261 cattctcgga ccattccgtg ggtgaggtgc tccacaccgg cccgggcggc ggtgcgaccg
     1321 cccggaatgt agcggcgtca ccggcgcttg cgccgccgcc cccgcggagg cattgatagg
     1381 catgagcgca ccgtaccctt cgcgcaccgc gcgtctgcat gcggcgctgg ccgacgcgcg
     1441 cgccggtctc gcgtcgcgcg acgaggcgat cgtccggacc caggtcaccg tctcgcagat
     1501 cgcggcgccg acgggggacg agcggcggcg cggcgcctgg gtcgccgagc ggctggcggc
     1561 cctcggcctc gagcaggtgc ggatggacga cgcgggcaac gtgatcgggc ggcgccccgg
     1621 cgcgccgcac tgcgatccgg acgcccccgt cgtgctctgc gcccacctcg acaccgtctt
     1681 cccggcgggc acgccgctcg acgtccgctg cgacggctcg cgactggtgg gacccggcat
     1741 cggcgacaac gggcgtgggc tcgcggcgat gctcgcgctc gccgaggccc tcgacggcca
     1801 gcggctacgg acgatgcgtc cgatcgagtt cgtggcgacg accggcgagg aggggctcgg
     1861 cgacctgcgc ggcgcgaagc actacttcgc gaccgccggg agcgccgcct ccggcatgat
     1921 cgccctcgat ggcgcgggcg acgagcgcat cgtccaccgc gcgctcggct cgcggcgatt
     1981 ccgtgtggtt ttccgcggtc ccggcggcca cagctgggcg gccttcgggg tgcccaacgc
     2041 ggtgcacgcg gcggcg
//
LOCUS       DASSYW010000918         2130 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1014568, whole genome shotgun sequence.
ACCESSION   DASSYW010000918 DASSYW010000000
VERSION     DASSYW010000918.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2130)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2130)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2130
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1014568"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(5..1519)
                     /locus_tag="VFN38_14535"
     CDS             complement(5..1519)
                     /locus_tag="VFN38_14535"
                     /EC_number="7.5.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HET9013040.1"
                     /translation="MSEPAVRFEDVSKRFPGVQALSEVSLEIAAGSCHALCGENGAGK
                     STLGKILAGLQEPDGGRLFVHGKEVHLRSPRDAQAAGIAMVHQELAFCDNLSVAENLC
                     LAALPSRGGLLDRGEMQRRATAMLAETGTTLDVHRPFGELAIAQRQMVQIAAAVGGGA
                     NIIVFDEPTSSLSQVEADQLYALMGRLQERGVTCIFVSHRMPEIFRLCDTVSVLRDGR
                     HVATRPVQGLTESELVQLMIGRPLAEYLPKHREAASGEEVLRVEDLTVPGKFEHLSLT
                     LRAGEVVGLAGLMGAGRSELACALFGLLHAESGSIYVSRHKVVIHDPKGAIAAGIALV
                     PEDRKKQGLVLMASALHNSSLPSLWRLSRFSWIQRDRERRLATEYFRRLRVRAASPDV
                     VVGGLSGGNQQKVVLAKWLAMRARVLILDEPTRGVDVGAKAEIHALIGELAEQGTAIL
                     LISSELPEVITLSERILVLREGRLVGEVRRQDATQEGLLRMMAGLHGAEAHAAD"
     gene            complement(1525..>2130)
                     /locus_tag="VFN38_14540"
     CDS             complement(1525..>2130)
                     /locus_tag="VFN38_14540"
                     /inference="COORDINATES: protein motif:HMM:NF024799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HET9013041.1"
                     /translation="KRFAYYGVDDLKTGQMMMAELVQQLGGKGRVAILAGNQNAPNLQ
                     RRVQGARDEAKKHPGIEIAGVFNHVETPQDAAAEVIRVNNAYPGITGWGFIGGWPLYT
                     QTLLTDLDPKKQKVVSVDALPIELPYVERGIVPVLLAQPVYKWGYVGVETIIDRAVHK
                     KEVPPIIAMDLVRVSKENLGEWARQLKEWGFTDVQEKYLKM"
BASE COUNT          296 a          799 c          700 g          335 t
ORIGIN      
        1 cgacctagtc ggcggcgtgc gcctccgcgc cgtgcagccc cgccatcatc cgcagcagcc
       61 cctcctgcgt cgcgtcctgc cggcggacct cgccgacgag ccgcccctcg cgcagcacga
      121 ggatccgctc ggagagggtg atcacctccg gcagctcgct cgagatgagc aggatggcgg
      181 tcccctgctc cgccagctcc ccgatgagcg cgtggatctc cgccttggca ccgacgtcca
      241 cgccgcgcgt cggctcgtcg aggatgagca cgcgggcgcg catcgccagc cacttcgcca
      301 gcaccacctt ctgctggttg cccccggaca ggccgcccac cactacgtcg gggctggccg
      361 cgcggacccg cagccgccgg aagtactcgg tcgccagccg gcgctcgcgg tcgcgctgga
      421 tccacgagaa gcgcgacagc cgccagagcg aggggagcga cgagttgtgc agcgcgctcg
      481 ccatgagcac tagcccctgc ttcttccggt cctccggcac gagggcgatt cccgccgcga
      541 tcgcgccctt cggatcgtgg atcacgacct tgtgccggct cacatagatg ctgccgctct
      601 cggcatggag cagcccgaac agggcgcacg ccagctcgga gcggccggcg cccatcaggc
      661 cggccagccc cacgacctcg cccgcgcgca gggtgagcga gagatgctcg aacttgcccg
      721 gcaccgtgag gtcttccacg cgcagcacct cctcgccgga ggccgcctcg cggtgcttcg
      781 gcaggtactc ggcgagcgga cgcccgatca tgagctgtac cagctcgctc tcggtgaggc
      841 cctgcaccgg gcgcgtggcg acgtggcgtc cgtcgcgcag cacgctgacg gtgtcgcaga
      901 gtcggaagat ctccggcatg cggtgcgaca cgaagatgca ggtcaccccg cgctcctgga
      961 gccgccccat cagcgcgtag agctgatccg cctccacctg gctcaggctg ctcgtcggct
     1021 cgtcgaacac gatgatgttc gccccgcccc ccacggcggc ggcgatctgc accatctggc
     1081 gctgcgcgat ggccagctcg ccgaacgggc gatgcacgtc gagcgtcgtc cccgtttcgg
     1141 cgagcatcgc ggtggcgcgg cgttgcatct cgccgcgatc cagcagcccg ccgcgcgagg
     1201 ggagggcggc gaggcagagg ttctcggcga cggagaggtt gtcgcagaac gccagctcct
     1261 ggtgcaccat cgcgatcccg gcagcctgcg cgtcgcgcgg gctgcggagg tgcacctcct
     1321 tgccgtgcac gaacagccgc ccgccgtcgg gctcctggag gccggcgagg atcttcccga
     1381 gcgtgctctt ccccgcgccg ttctccccgc acagcgcgtg gcaggagccg gcggcgatct
     1441 ccagcgacac ctcgctcagc gcctggacgc cggggaaccg cttgctgacg tcttcgaatc
     1501 ggaccgcggg ctcgctcatc gccatcacat cttgaggtac ttctcctgca cgtcggtgaa
     1561 gccccattcc ttcagctggc gggcccactc gccgaggttc tccttcgaga cgcgcacgag
     1621 gtccatcgcg atgatcggcg gcacctcctt cttgtgcacc gcccggtcga tgatcgtctc
     1681 gacgccgacg tagccccact tgtacaccgg ctgcgcgagg agcaccggca cgatgccgcg
     1741 ctccacgtac ggcagctcga tcgggagcgc atccacggac acgaccttct gcttcttagg
     1801 gtcgaggtcg gtgagcaggg tctgggtgta gagcggccag ccgccgatga acccccagcc
     1861 cgtgatcccc gggtacgcgt tgttgacgcg gatcacctcg gccgccgcgt cctgcggcgt
     1921 ctcgacgtgg ttgaacaccc ccgcgatctc gatgccgggg tgcttcttcg cctcgtcgcg
     1981 agccccctgc acgcggcgct ggaggttggg cgcattctgg ttgccggcga ggatggccac
     2041 gcggcccttg ccgccgagct gctgcaccag ctccgccatc atcatctggc ccgtcttcag
     2101 gtcatcgacg ccgtagtacg cgaaccgctt
//
LOCUS       DASSYW010000919         2091 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1748741, whole genome shotgun sequence.
ACCESSION   DASSYW010000919 DASSYW010000000
VERSION     DASSYW010000919.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2091)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2091)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2091
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1748741"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            82..>2091
                     /locus_tag="VFN38_14545"
     CDS             82..>2091
                     /locus_tag="VFN38_14545"
                     /inference="COORDINATES: protein motif:HMM:NF018757.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine amidotransferase"
                     /protein_id="HET9013042.1"
                     /translation="MFDALFQALFSYRPVVFQQGEFRFDLTGASLFAAVLVAVAIGMA
                     VFTYRRVQVTLGRPRDRVILTAIRLAILGLLLFCLFRPTLVVRAAVNQQNVVAVLLDD
                     SSSMQIPDADGKTRGQWVQEAFGASTAPLLKSLGDRFLVRVFRFSSAAARVQSAKELT
                     FNGSQTKLGAAFDGVREELAGLPVAGVVLVTDGADTSEASLSQAMLGLKAEKLPVFAV
                     GVGSESLPRDIQVDRVTVPRTVLKDASVLLDVVVAQTGFNGRTVTVDVEDDGRIIGSE
                     KTTLPSDGSPATVRVRAVALESGPRLFKFRVTPQDGEVVTQNNTREALVNVKDTRERI
                     LYYEGEPRFEMKFIRRAVADDKNLLAVALQRTADNKYMRLDGDPEEVVGGFPKTRDEL
                     FRYRGLILGSVEAGAFSGDQLQMIADFVDRRGGGLLMLGGPRAFGEGGYGGTPVADAL
                     PLQIAPTTRASEPAPLARLKVSPTAAGQGHAATQIMPTQDASVKRWSELPQVTSVNAP
                     LPLKPGATALLSGTDQRGRSQVVLASQSFGRGKAIAFTAQDSWEWQMHASIPLEDQTH
                     ETFWRQLMRWMVDGVPDVVDIRMTDRVEPGEPVTIDARVVDKSYVEKNDATVVAHVTR
                     PGGATLNVPMQWTGERDGQYRGMFVSTEAGAYEVTVDATQGAESLG"
BASE COUNT          317 a          705 c          747 g          322 t
ORIGIN      
        1 gcctctcgaa tcccaggcgg ccccgctgta tgatcgccac ctctccaggc ctgaggggtc
       61 agggattagg agagggctcc aatgtttgac gccctgtttc aggcgctctt ctcgtatcgt
      121 cccgtcgtct tccagcaggg cgaattccgg ttcgatctca ccggcgcgtc gctcttcgcc
      181 gcggtgctcg tggcggtggc gatcgggatg gccgtcttca cgtaccgccg tgtccaggtg
      241 acactggggc ggccccggga tcgcgtcatc ctgacggcga tccgcctggc gatcctgggt
      301 ctcctgctct tctgcctctt ccggcccacg ctcgtggtgc gcgccgccgt gaaccagcag
      361 aacgtcgtgg ccgtgctgct cgacgactcg agcagcatgc agattcccga cgccgacggc
      421 aaaacccgcg gccagtgggt gcaggaggcg ttcggcgcct ccaccgcgcc gctcctgaag
      481 tcgctcggcg accgcttcct ggtgcgcgtg ttccggttct cgtccgcggc cgcgcgcgtc
      541 cagtcggcca aagagctcac cttcaacggc tcgcagacca agctcggcgc cgccttcgac
      601 ggtgtccgcg aggagctggc cggcctgccg gtggccgggg tggtgctggt gacggacggg
      661 gccgacacca gcgaagcctc gctgagccag gccatgctgg gcctgaaggc ggaaaagctt
      721 cccgtcttcg ccgtgggcgt cggcagtgaa tcgttgccgc gcgacatcca ggtggaccgc
      781 gtcaccgtgc cgcgcacggt gctgaaggac gcgtcggtcc tgctcgatgt cgtggtggcg
      841 cagaccggct tcaacggccg gaccgttacg gtagacgtgg aggacgacgg tcggatcatc
      901 gggtcggaaa agaccacgct cccgtcggac gggtcgccgg cgacggtgcg ggtgcgcgcc
      961 gtggcgctgg aatccggtcc gcgcctgttc aagttccggg tcacgccgca ggacggcgag
     1021 gtcgtcacgc agaacaacac gcgcgaggcg ctcgtgaacg tgaaggacac gcgcgagcgc
     1081 atcctctatt acgaaggcga gccgcggttc gagatgaagt tcatccgccg cgcggtggcc
     1141 gacgacaaga acctgctggc ggtcgcgctg cagcgcaccg ccgacaacaa gtacatgcgc
     1201 ctcgacggcg accccgaaga ggtggttggc ggcttcccga agacgcgcga cgagctcttc
     1261 cgctatcgcg gcctgatcct cgggagcgtc gaagccggcg ccttctcggg cgaccagctg
     1321 cagatgatcg cggacttcgt ggatcgccgc ggcggcggcc tgctgatgct cggcgggccc
     1381 cgggcgtttg gcgagggcgg ctatggcggc acgccggtgg ccgacgcgct cccgctgcag
     1441 atcgcgccca cgacgcgcgc atcggagccg gcgccgctgg cgcgactcaa ggtgtcgccc
     1501 acggccgcgg gccaggggca cgccgcgacg cagattatgc cgacgcagga cgcgtcggtg
     1561 aagcgctgga gcgagctgcc gcaggtgacc agcgtcaacg cgccgctgcc gttgaagccg
     1621 ggcgccaccg cgctcctctc gggcaccgac cagcgcggcc gcagccaggt cgtgctcgca
     1681 tcgcagagct tcggccgcgg taaggcgatc gcgttcaccg cccaggactc gtgggagtgg
     1741 cagatgcacg cgtcgattcc gctcgaggat cagacgcacg aaacgttctg gcgccagctg
     1801 atgcggtgga tggtggacgg cgtgccggac gtcgtggaca tccggatgac ggaccgcgtc
     1861 gagccgggcg agcccgtgac gatcgacgcg cgcgtggtgg acaagtcgta cgtcgagaag
     1921 aacgacgcca ccgtagtcgc gcacgtcacc cgtccgggcg gcgccacgct gaacgtgccc
     1981 atgcagtgga ccggcgaacg cgacggccag tatcgcggca tgttcgtcag taccgaggcc
     2041 ggggcctacg aagtgaccgt ggacgccacg cagggagccg aatcgctcgg a
//
LOCUS       DASSYW010000920         2942 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_912001, whole genome shotgun sequence.
ACCESSION   DASSYW010000920 DASSYW010000000
VERSION     DASSYW010000920.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2942)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2942)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2942
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_912001"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..236
                     /locus_tag="VFN38_14550"
     CDS             <1..236
                     /locus_tag="VFN38_14550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013043.1"
                     /translation="GDTLTIRGRPILFGVTVPLGAAHAALGERFVAYLLSEEGRRILR
                     RARFDALDQPVVVGRDPPAALAAGVRDVGAPKR"
     gene            305..652
                     /locus_tag="VFN38_14555"
     CDS             305..652
                     /locus_tag="VFN38_14555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013044.1"
                     /translation="MSPHRTFLDDLARLWNAWDVIPAWGERRTGDRRTRSAAGGTHII
                     ERRTRERRRQRGLRISLPPRLAQGWIAFEHGDERRRVAPIVAGWEILPEEGLRDLWRE
                     AERLPPRRKRLVE"
     gene            complement(700..2301)
                     /locus_tag="VFN38_14560"
     CDS             complement(700..2301)
                     /locus_tag="VFN38_14560"
                     /inference="COORDINATES: protein motif:HMM:NF013567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HET9013045.1"
                     /translation="MAAGDDLNRISRRTFVREGGRAAAALAIAPMIVPRHVLGGVGYR
                     APSRTLNVACVGIGGMGMVNMNVLVQAGENIVAVCDADFAYVERSLAGRLRPPQGQSS
                     SSPESLRLKAAYEKAAKYEDFRVMLERQKDIDAVVIATPDHLHGIIANAAMKAGKHVY
                     VQKPLTYSVYEARLLARTARETKVVTQMGNQGHSQEGTRRIHEIVRAGVIGPVREVHV
                     WTDRPQRYWAQGIPRPARPVRTVAGPVLGAPAAVPPTPPVTPAPAPAGPPVPPRWGMR
                     TVDNAILRAMAENPQSPPPGLRWDLFLGPAPDVPYHPVYHPFSWRGWPEFGVSAIGDM
                     GAHLLDQPFWALDLGYPTSVIASSTPWGGTPANPGAYPLAMTARYEFAARGAQPAVTL
                     TWYDGGLLPALTQDIVLPRADGGGGVMIGEQGYLTYETYGENLVVYPEAAAARAASVP
                     RTLPRIEVPHEVNWAQACKGEAAASCPFEYAAPLTEVMLLGVAALRAGQSRRILYDGA
                     GMSITNIPEANAYLTREFRAGWFPG"
     gene            2491..>2942
                     /locus_tag="VFN38_14565"
     CDS             2491..>2942
                     /locus_tag="VFN38_14565"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metalloprotease"
                     /protein_id="HET9013046.1"
                     /translation="MLQPRIVIRLAGSFAACALLGACAGSISQQEEVQMGAQTAAQVN
                     AQLPMLNDATINAYVNSLGGSIARRTSRADLDWHFAVVNSEVINAFALPGGYVYVNRG
                     VLTNAGNESELAGVLGHEIEHVVRRHSVKQMEKAQGANLGLGIACALTR"
BASE COUNT          398 a         1099 c         1038 g          407 t
ORIGIN      
        1 ccggcgacac cctcaccatt cgcgggcggc ccatcctgtt cggcgtcacc gtgccgctcg
       61 gggcggcgca cgcggcgctc ggcgagcgct tcgtcgccta cctcctgtcg gaggagggac
      121 gccgcatcct ccggcgcgcc cggttcgatg cgctcgacca gcccgtggtg gtcggccgcg
      181 atccccccgc ggcgctcgcg gccggcgtcc gggacgtcgg cgcccccaag cggtgacggc
      241 ccgtgacgtg cgtggccaga ccggctgact cagcgcaccc cccaccgccc caggagccga
      301 gcgcgtgtcc ccccaccgaa cctttctcga cgatcttgcc cgtctctgga acgcctggga
      361 cgtgatcccg gcatggggcg agcgtcgcac cggcgaccgg cgcacgcgct cggctgcggg
      421 gggcacgcac atcatcgagc ggcgcacgcg cgagcggcgt cgccagcgcg gcctgcgaat
      481 ctccctcccg ccgcggctgg cgcagggctg gatcgccttc gagcacggcg acgagcggcg
      541 tcgcgtcgcg cccatcgtcg ccggatggga gatcctcccc gaggaggggc tccgtgacct
      601 ctggcgcgag gccgagcggc tgccgccgcg ccggaagcgg ctggtggagt agcggcgccc
      661 cgccggcggc ggcccgccgc cggacgaggg tcgacaggtc tagcccggaa accaccccgc
      721 gcggaactcc cgcgtgagat aggcgttcgc ctccgggatg ttcgtgatgc tcatccccgc
      781 gccgtcgtag aggatgcgcc ggctctgccc cgcgcggagc gcggcgacgc cgagcagcat
      841 cacctcggtg aggggcgcgg cgtactcgaa cggacagctc gccgccgcct cgcccttgca
      901 cgcctgcgcc cagttcacct cgtgcggcac ctcgatgcgc ggcagggtcc tgggcaccga
      961 cgcggcacgc gctgccgccg cctcggggta caccaccagg ttctccccgt aggtctcgta
     1021 ggtgagatac ccctgctcgc cgatcatcac gccacccccg ccatcggcgc gtggcagcac
     1081 gatgtcctgg gtgagggccg gcagcagtcc gccgtcgtac caggtgagcg tcaccgcggg
     1141 ctgcgcaccg cgtgcggcga actcgtatcg cgccgtcatg gccagcggat aggcgcccgg
     1201 attcgccggc gttccgcccc acggcgtgga cgacgcgatc acgctcgtcg ggtagccgag
     1261 gtccagcgcc cagaacggct ggtcgagcag gtgcgccccc atgtcgccga tggcgctcac
     1321 gccgaactcg ggccagccgc gccagctgaa cggatggtag accggatgat agggcacgtc
     1381 gggcgccggc ccgaggaaca ggtcccatcg aagtcccggc ggcggggact gcgggttctc
     1441 ggccatcgcg cgaaggatcg cgttgtccac cgtgcgcatc ccccaccgcg gcggaacggg
     1501 agggccggcc ggtgccggag cgggggtgac cggaggcgtg ggcgggaccg ccgccggggc
     1561 gccgagcacg ggaccggcga cggtgcgcac cggccgcgcc ggacgcggga tcccctgcgc
     1621 ccaatagcgc tgcggccggt cggtccacac gtgcacctcg cgcaccggcc cgatcacgcc
     1681 ggcccgcacg atctcgtgga tccgccgcgt cccttcctgc gagtgcccct ggttgcccat
     1741 ctgcgtcacg accttggtct cgcgcgccgt gcgtgccagc aggcgggcct cgtacaccga
     1801 gtacgtgagg ggcttctgca cgtacacgtg cttgcccgcc ttcatcgccg cgttcgcgat
     1861 gatgccgtgc aggtggtcgg gcgtcgcgat caccacggcg tcgatgtcct tctgccgctc
     1921 gagcatgacg cggaagtcct cgtacttcgc cgccttctcg tacgctgcct tcagccggag
     1981 cgactcgggc gacgaggacg actgtccctg gggcgggcgc aggcggccgg cgaggctgcg
     2041 ctccacgtac gcgaagtccg catcgcagac tgccacgatg ttctcgcctg cctgcacgag
     2101 cacgttcatg ttcaccatcc ccatcccgcc gatccccacg cacgcgacgt tgagcgttcg
     2161 gctcggcgca cggtagccga cgccccccag cacgtggcgc ggcacgatca tcggcgcgat
     2221 ggcgagcgcg gcggccgcgc ggccgccctc acgtacgaag gtgcggcgcg agatgcggtt
     2281 gaggtcgtcc ccggcggcca tgacgtctcc tggattggcg gatgggacaa gttgtgcgcg
     2341 cggtcgccgg ctggccagac gccgcgattg tgagcccggg cggagggacg ctcgtcgcgt
     2401 ccgcatggct caggtcgtgc gtccccggga ggccggcgga gccgacgtgg gatccgcccg
     2461 cacccgacca cgacagcttg gagatcaccc atgctccagc ctcgcatcgt catccgactc
     2521 gcgggcagct tcgccgcctg cgcgctgctc ggcgcctgcg ccggcagcat ctcccagcag
     2581 gaggaagtgc agatgggcgc gcagaccgcc gcccaggtga acgcgcagct tcccatgctg
     2641 aacgacgcga ccatcaacgc gtacgtgaac tcgctcggcg gctccatcgc gcgcaggacc
     2701 tcgcgcgccg acctcgattg gcacttcgcc gtggtgaaca gcgaggtgat caacgccttc
     2761 gcgcttcccg gtggctacgt gtacgtcaac cgcggcgtgc tgaccaacgc gggcaacgag
     2821 agcgagctcg cgggagtact cggccacgag atcgagcacg tcgtccgccg ccactccgtg
     2881 aagcagatgg agaaggccca gggcgcgaac ctcggtctgg gcatcgcgtg cgcgctcacg
     2941 cg
//
LOCUS       DASSYW010000921         2232 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1630314, whole genome shotgun sequence.
ACCESSION   DASSYW010000921 DASSYW010000000
VERSION     DASSYW010000921.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2232)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2232)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2232
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1630314"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..748
                     /locus_tag="VFN38_14570"
     CDS             <1..748
                     /locus_tag="VFN38_14570"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HET9013047.1"
                     /translation="LLDIRATILIGAATCLVTALVAFLMWEPQHEATTSAPRARYWAT
                     IGSAFREVWHNRAVRAVVLLTGTVFASLEAVMYLIQPYLLDRGIEIGVVFSMLQVPTL
                     IAGAAGALLASRVHGHARLLMLALPACGVAAYIALALGPGLSAYAAFPLMYLFASCLM
                     PLATGQINRNIGSAQRATILSIHGMVASLLLAALAPGVGFTTDNQGLPQAFALGAGVT
                     LLSLVLFGSMLVGTRRASAESAPMPAPADV"
     gene            complement(745..1923)
                     /locus_tag="VFN38_14575"
     CDS             complement(745..1923)
                     /locus_tag="VFN38_14575"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase family protein"
                     /protein_id="HET9013048.1"
                     /translation="MIYLDHAATTPLRPEARAAMEPFLGSAFGNPSGLYAIGREAQEA
                     VDGARSVVAAALGARPPEILFTSGGTESINSAMLGIAYAMRRASAGAHVITSAIEHHA
                     GLHAAQYLEELGFEVTYVGCDSHGRVGVDEVERAMRPSTVLVSVMLANNEVGTVQPIP
                     EIAAMLRARQTASGHGVLLHTDAVQAPGWLDIDVDALAVDALSLSSHKFGGPKGSGVL
                     FLRRATPYRQLLHGGGQEMQKRAGTENVPGIAGTAAALAVTIGGIEARRNRVRALRER
                     LREGILARIPEAIVNGCQENCLPNNLNVAFDGVESDVLVGDLDEAGVAASSGSACSNS
                     TWEPSHVLMAMGVPIRRAVGSVRFSLGETTTADEVDTVLQLLPAMVARARSESAALAR
                     "
BASE COUNT          332 a          804 c          729 g          367 t
ORIGIN      
        1 cctgcttgat atccgcgcga cgatcctcat tggcgcggcc acctgcctgg tgacggcgct
       61 cgtagcgttc ctgatgtggg agccgcagca cgaggccaca accagcgcgc cgcgcgcccg
      121 ctactgggcg acgatcggct ccgccttccg cgaggtgtgg cacaaccggg ctgttcgggc
      181 cgtggtcctc ctgaccggga cggtgtttgc ctcactcgag gcggtgatgt acctcatcca
      241 gccgtatctg ctcgaccgcg gcatcgagat cggcgtggtg ttctcgatgc tccaggtgcc
      301 gacgctcatc gccggggcag cgggggcgct ccttgccagc cgcgttcatg gccatgcgcg
      361 cctgctgatg ctggcgctgc ccgcttgcgg cgttgcggcc tacatcgcgc tcgcgcttgg
      421 cccgggactc tcggcatacg cggccttccc gctcatgtac ctgttcgcct cgtgcctgat
      481 gccgctcgcg acgggccaga tcaaccgcaa cattggctcc gcgcagcgcg cgacgatcct
      541 ctcgattcac ggcatggtcg ccagcctgct cctcgccgcg ctggcgcccg gcgtggggtt
      601 cacgaccgat aaccaggggc tcccccaggc ctttgctctc ggcgcaggcg tcacgctcct
      661 cagcctcgtg ctgttcgggt cgatgctggt ggggacgcgc cgggcatccg ccgagagcgc
      721 tcccatgccg gcccctgctg atgtctagcg cgccagcgcc gcggattccg agcgggctcg
      781 cgcgaccatc gcaggcagca gctgcaacac cgtatcgacc tcgtcggcgg tggtggtttc
      841 gcccaggctg aatcgaacgc tacccaccgc ccgccggatg ggcaccccca tcgccatgag
      901 cacgtgggac ggctcccacg tcgagttcga gcaggcgctt cccgagctcg ccgcgacacc
      961 cgcctcgtcc aggtcgccga caagcacatc gctctccacg ccgtcgaagg caacattgag
     1021 gttgttgggc aaacagttct cctggcagcc gttgacgatc gcctcgggga tgcgggccag
     1081 gatcccttca cgcaaacgct cgcgcagcgc tctcacccga tttcgccgcg cttcgatgcc
     1141 gccgatcgtg accgcgagtg cggccgccgt gccggcgata cccggcacgt tctcggtgcc
     1201 agcccgcttt tgcatctcct gaccgccgcc gtgcagcagc tggcggtagg gcgtcgcccg
     1261 ccgcaggaag agaacgccgc tgcccttggg gccaccgaac ttgtgcgacg aaagactcag
     1321 ggcgtccacc gcgagggcgt cgacgtcgat gtcgagccag cccggcgcct ggacggcatc
     1381 ggtatgcagg aggaccccgt ggccgctcgc cgtttggcgc gcgcgcaaca tcgcggcaat
     1441 ctccggaatg ggctggaccg tgccgacttc gttgttcgcc agcatgacgc taaccaggac
     1501 tgtcgacggc cgcatcgcgc gctctacctc gtcgacaccc acgcggccgt gcgaatcgca
     1561 ccccacgtag gtgacctcga atcccaattc ctcgaggtac tgcgctgcgt gcaggccagc
     1621 gtggtgttcg atagccgatg ttatgacgtg tgcgccggcg ctcgcgcggc gcatcgcgta
     1681 ggcgatgccg agcatggcgg agttgatact ctcggtaccg ccgctggtga acagaatctc
     1741 gggcggccgt gcgcccagtg cggcggcgac gaccgagcgc gcgccatcta cggcctcctg
     1801 ggcctcccgc ccgatcgcgt agaggccgct ggggttgccg aaggcgcttc cgaggaatgg
     1861 ctccatcgcc gcacgagcct cggggcgcag cggggtggtc gcggcgtggt ccaggtagat
     1921 cactgcagcc agcgtagcat cgagcgctac ggcgcgcggc ccctgacccg gcgtttacca
     1981 cgccctcact ctcaactcgc cgttcatcta ttggactcgt aacagatcgg cccacaggcc
     2041 ttgtgacccg cgaggggcac cacctaggat gcaagcatgg cccgcccgcg aaaagcccgc
     2101 cgcgacaccc cagcggccgg cgtgatctac gacctcgacg aacggcgccg gcgcgtgcgc
     2161 agccggaacg aggacggacc cgattccccc gacgaacagc cgcctgagga agagcggaag
     2221 gaatgcgaga ct
//
LOCUS       DASSYW010000922         2506 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1722337, whole genome shotgun sequence.
ACCESSION   DASSYW010000922 DASSYW010000000
VERSION     DASSYW010000922.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2506)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2506)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2506
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1722337"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..942)
                     /locus_tag="VFN38_14580"
     CDS             complement(<1..942)
                     /locus_tag="VFN38_14580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013049.1"
                     /translation="MIPGRSGSFPRVDHGAPWVAARARNALRRWLLVLAVGATTFVIA
                     LVALVLVPRQATRSALVIMPSSAERPDTMPLARAAARARVLVVRADSAFQLSRLAARD
                     SAATSPPADTLPPELAARRDSLLGSIGTLNRLLARAENAPLPASYRALGETRELRGEA
                     RVRALLDSLADIEREREAFGAVGGVDPIFVALTARAGEVGRAIQEIAQARRAVLRREL
                     AALRPAPPPPTVAAIGDSSAPSSPEMAPVERAGASPDSALRAARLATARESLAVSLQA
                     LAEARQRNEAFDQRVERARELANVAAPPFALLAAALVL"
     gene            complement(997..1983)
                     /gene="uvsE"
                     /locus_tag="VFN38_14585"
     CDS             complement(997..1983)
                     /gene="uvsE"
                     /locus_tag="VFN38_14585"
                     /inference="COORDINATES: protein motif:HMM:TIGR00629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0009650 - UV protection [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UV DNA damage repair endonuclease UvsE"
                     /protein_id="HET9013050.1"
                     /translation="MSIRWGLCCQFLDAPIRFRQATHRYVATLSPAGREEYLTNIARA
                     NAIALAHAVEHCHELGIGAFRINSQIVPLATHPESGYALEELAEGEVILRAYGAAGEL
                     ARWRDVRLSFHPDQFVVLNSEREDVVRSSLREMEHQATVARLIGADVLCLHGGGAAGG
                     MANALERLERGIDRLSDGARALLALENDDRLFSVRDLLPLCERTGVPLIYDAHHHRCH
                     PDGLPVDEATTRAMATWGAREPYMHLSSPRDGWGAANPRPHDAFVDPADVPESWLRLA
                     LAGRRFTVDVEAKDKERAVLAIRDATDALLAERRTGVARVLPPACVAPAGPT"
     gene            complement(2189..>2506)
                     /locus_tag="VFN38_14590"
     CDS             complement(2189..>2506)
                     /locus_tag="VFN38_14590"
                     /inference="COORDINATES: protein motif:HMM:NF012355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /protein_id="HET9013051.1"
                     /translation="KMVGDEKGYRFEPADITIKQGDGIKFEMVSGGPHNVAFDPATLP
                     ADVKPQLTANMPNQMSELSGPLLVNPNEAYTISFASVKPGKYEFHCTPHLAMGMKGTI
                     TVQ"
BASE COUNT          350 a          862 c          955 g          339 t
ORIGIN      
        1 gaggacgagg gccgccgcga gcagggcgaa gggaggagcc gcgacgttgg ccagctcgcg
       61 cgcccgctcc actcgctggt cgaacgcctc gttccgctgc cgcgcctcgg cgagggcctg
      121 cagcgagacg gccagcgact cgcgcgccgt cgcgagtcgc gccgcccgca gggcgctgtc
      181 gggtgacgct ccggcccgct ccactggcgc catctcgggc gatgacggcg ccgagctgtc
      241 gccaatcgcg gccacggtcg gcggcggcgg agcgggccgg agggcggcca gctcgcgtcg
      301 cagcacggcg cggcgcgcct gggcgatctc ctggatcgcg cgtccgacct cgccggcccg
      361 cgcggtgagc gcgacgaaga tggggtccac cccgcccacg gcgccgaacg cctcgcgctc
      421 acgctcgatg tcggccaggg aatcgaggag ggcgcgaacg cgagcctccc cccgcagctc
      481 gcgggtctcg ccgagcgcgc ggtaggacgc cggcagcgga gcgttctcgg cgcgcgccag
      541 cagacggttc agggtgccga tcgacccgag cagggagtcg cgccgcgccg ccagctccgg
      601 cgggagagtg tcggcggggg ggctcgtggc cgccgaatcc cgcgccgcaa gccgcgacag
      661 ctggaacgcg ctgtcggccc ggacgacgag gacgcgagcc cgggccgcgg cgcgggcgag
      721 cggcatggtg tcgggacgct cggccgatga tggcatgatg acgagcgccg atcgcgttgc
      781 ctgtcgcggc acgaggacga gcgcgacgag ggcgatgacg aaggtcgtcg cccccacggc
      841 gaggacgagc agccaccggc gcagcgcgtt gcgcgcccgc gccgccaccc agggcgcgcc
      901 gtggtccacc cgcgggaagc taccgctgcg ccccggaatc atgggcggac ggggtcgggg
      961 gggtggctcg atcgaaacgt cgcggacatc gccgcatcat gtggggccag caggggccac
     1021 gcaagccgga gggagtaccc gggcgacacc ggtccgccgc tcggcgagca gggcgtcggt
     1081 ggcgtcgcgg atcgccagca ccgcgcgctc cttgtccttg gcctcgacgt ccaccgtgaa
     1141 gcggcggccg gcgagggcga ggcggagcca gctctccggg acgtcggccg gatccacgaa
     1201 ggcgtcgtgc gggcgtgggt tcgccgcgcc ccagccgtcg cgcggcgagg agaggtgcat
     1261 gtacggctcg cgggcgcccc aggtcgccat ggcgcgggtc gtcgcttcat cgaccggaag
     1321 gccgtcgggg tggcagcggt ggtgatgcgc atcgtagatg agggggacgc ccgtccgctc
     1381 gcagagtgga aggaggtcgc gcacgctgaa caggcggtcg tcgttctcga gcgcgagcag
     1441 ggcgcgcgcg ccgtcgctca gccggtcgat gccgcgctcc agccgctcga gggcgttcgc
     1501 catccccccc gccgcgccgc cgccgtgcag gcagaggacg tcggcgccga tgaggcgcgc
     1561 gaccgtcgcc tggtgctcca tctcgcggag cgacgatcgc accacgtcct cgcgctccga
     1621 gttgaggacg acgaactggt cgggatggaa gctgagacgg acgtcgcgcc accgcgccag
     1681 ctcgccggcc gcgccgtagg cccggaggat cacctcgccc tcggcgagct cctcgagcgc
     1741 gtagccgctc tccgggtgcg tcgcgagtgg gacgatctgg ctgttgatcc gaaacgcgcc
     1801 gatccccagc tcgtgacagt gctcgaccgc gtgggcgagg gcgatcgcgt tggcgcgggc
     1861 gatgttggtg aggtattcct cgcgccccgc cggcgagagc gtcgccacgt agcgatgcgt
     1921 cgcctgccgg aagcggatcg gggcatcgag gaactggcag cagaggcccc atctgatgga
     1981 catcgggaat cgcgaggctc gagttcctcg ctccaggagc gggagcgaaa gaggaacgac
     2041 tgttcatggg cgaacgcgcg aaggctgatg ctcgttcgcc ggaattctcc gagacgggag
     2101 catcagccat tcctctttcg ctcctggcct gaacgcaaaa cgggccccgg atcgctccgg
     2161 ggcccgttcc atccttcccg atccgagctt actggaccgt gatcgttccc ttcatgccca
     2221 tcgcgaggtg cggcgtgcag tggaactcgt acttgccggg cttcacgctg gcgaacgaga
     2281 tcgtgtaggc ctcgttcggg ttgacgagga gcgggccgga cagctcggac atctggttcg
     2341 gcatgttcgc cgtgagctgc ggcttcacgt cggccggcag cgtggccggg tcgaacgcga
     2401 cgttgtgcgg gccgcccgag accatctcga acttgatgcc gtcgccctgc ttgatcgtga
     2461 tgtcggcggg ctcgaagcga tagcccttct cgtcgccgac catctt
//
LOCUS       DASSYW010000923         2388 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_754384, whole genome shotgun sequence.
ACCESSION   DASSYW010000923 DASSYW010000000
VERSION     DASSYW010000923.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2388)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2388)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2388
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_754384"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..317)
                     /locus_tag="VFN38_14595"
     CDS             complement(<1..317)
                     /locus_tag="VFN38_14595"
                     /inference="COORDINATES: protein motif:HMM:NF022750.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3108 domain-containing protein"
                     /protein_id="HET9013052.1"
                     /translation="MTASLRHLVRHALVLGALAATPVAAQDHGSAPIPVPFGVGERLE
                     YDVKFGKLRVGSGSMEVADVQDVRGRSAWHTIFQVRGGTFFYRVNDQYESWIDRYTGN
                     SLR"
     gene            complement(314..1063)
                     /locus_tag="VFN38_14600"
     CDS             complement(314..1063)
                     /locus_tag="VFN38_14600"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HET9013053.1"
                     /translation="MLYFCIPAYNEAPTVGLLLWRLRKVFQEQPREYEVLVYDDGSTD
                     ATAETLAPYHKVMPLTVLGGTKVGYAGAVDALCREASRRTRYPRRDAVILLQADFTDQ
                     PESLPELVKRFDGGADLVIGERPAESVKDPAPVRSLRRLAPWVVRPFVSVAGVRDPFA
                     TLRLFRVSVIRDLIKERGDAPLLEGDGWSANADLLLRAAPHARRVETVELAPRYDVRE
                     RPSRIRPWADAMTLFRFARGARGRSVRAVRA"
     gene            1348..2079
                     /locus_tag="VFN38_14605"
     CDS             1348..2079
                     /locus_tag="VFN38_14605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013054.1"
                     /translation="MILANTRHHLTRDDAQLVARLIARDSGGELSQVEQELADHGIDS
                     VLDDPRLPAALLRSRQGACASLPLFAYVMVRHALTRLGEGDRLLADYLASLMLHFGLR
                     DRAWRVGESDDQVYTTLADLLADVDDPDGRRSFLVRTHLGNYALWVSGFFPDYIEHRR
                     SRRGGPDLDYFEEMGRRGFQLAADHRLAENHGMATLYATAADRFGLLRAALNDVSDSL
                     LFPDHSSPDRLIRQVTNEARWRRVS"
     gene            complement(2045..>2388)
                     /locus_tag="VFN38_14610"
     CDS             complement(2045..>2388)
                     /locus_tag="VFN38_14610"
                     /inference="COORDINATES: protein motif:HMM:NF019342.4"
                     /note="Members of this family of hydrolases with an active
                     site Cys residue belong to MEROPS family C26; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HET9013055.1"
                     /translation="GSWGRSDRVHDLRVAAGSRLARALGATDASTNSLHHQAIARVAD
                     GLVAVAHAPDGVVEGVEWSGDDWWMAGVQWHPEELTDTAEAWDRALFAAFAAAVRAGA
                     VSSHGASAPRS"
BASE COUNT          352 a          823 c          866 g          347 t
ORIGIN      
        1 aaccggagcg agttgcccgt gtagcggtcg atccagctct cgtactgatc gttcacgcgg
       61 tagaagaagg tgccgccgcg gacctggaag atggtgtgcc aggcggaacg gccgcggacg
      121 tcctggacgt cggcgacttc catggacccc gagccgaccc gcagcttgcc gaacttcacg
      181 tcgtactcga gccgctcgcc gacgccgaac ggcacgggga tgggcgcgct gccatgatcc
      241 tgcgcggcga ccggggtggc ggcgagggct ccgaggacga gggcgtgacg gacgaggtgg
      301 cgcagcgagg cggtcatgcc cgcaccgccc gcacgctgcg gccgcgtgcg ccgcgggcaa
      361 agcggaagag cgtcatggca tccgcccacg ggcggatgcg tgacggccgc tcgcgcacgt
      421 cgtagcgcgg cgcgagctcc accgtctcca cgcggcgcgc atgcggcgcg gcgcgcagca
      481 gcaggtcggc gttggcgctc cagccgtcgc cctcgagcag cggggcgtcg ccgcgctcct
      541 tgatcaggtc gcgaatgacc gacacgcgga agaggcgcag ggtcgcgaac ggatcgcgca
      601 cgccggcgac gctgacgaac ggtcgcacga cccacggagc gaggcggcgg agggagcgga
      661 cgggcgccgg atccttcacg ctctcggcgg gccgctcgcc gatcacgaga tcggcgccgc
      721 cgtcgaagcg cttcaccagc tccggcaggc tctccggctg gtcggtgaag tcggcctgga
      781 ggaggatcac cgcgtcgcgt cgcggatatc gcgtgcgacg ggaggcctcg cggcagaggg
      841 cgtcgacggc gccggcgtag ccgaccttcg tcccgccgag gaccgtcaac ggcatgacct
      901 tgtgatacgg cgcgagcgtc tcggccgtcg cgtcggtgct cccgtcgtca tacacgagca
      961 cttcgtactc gcgcggctgc tcctggaaca ccttgcgcag gcgccagagc aggaggccga
     1021 ccgtgggggc ttcgttgtag gcagggatgc agaagtacag cacgagctcc tcgagaacgc
     1081 gagtgaaatc cgcccgtaag gtacggacac cggggggacg ctcgccaccc tgatgttcag
     1141 ccgagccgta ctaccccggt gtcgagcggc gggttcgcga ggatcggcgc gggaaggtgc
     1201 gttgggtcac ggcggagcgg cccagcactc ccgtcgcggg agtgccagca cggtaaccgc
     1261 gcgcaattcg agtcgtcaca ttattgagtg gcaccttcgt gccatcgcgc gggccgcggg
     1321 gtatgagcgg ccgagggggg acgactcatg attctcgcga acacacgaca tcacctcacg
     1381 cgtgacgacg cgcagctcgt ggcgcggctc attgcgcgcg attccggtgg ggaactctcg
     1441 caggtggagc aggagctcgc cgatcacggg atcgattccg tactcgacga tcctcggctg
     1501 cccgccgcgc tcctccgatc acggcagggc gcgtgcgcct cgctgccgct cttcgcgtac
     1561 gtgatggtgc ggcatgcgct gacgcgactc ggtgaagggg atcgcctgct ggcggactat
     1621 ctcgcgtcgt tgatgctgca cttcggcctg cgcgaccgcg cctggcgggt gggcgagtcc
     1681 gacgaccagg tctatacgac gctcgccgac ctgctggccg acgtggacga cccggatggg
     1741 cggcgcagct ttctcgtgcg cacgcacctc gggaactacg cgctctgggt gagcggcttc
     1801 ttccccgact acatcgagca tcgtcggtcg cgccgcggcg gtccggacct cgactacttc
     1861 gaggagatgg gacgtcgcgg cttccagctc gcggccgatc atcggctggc ggagaaccac
     1921 gggatggcga cgctgtacgc cacggcggcg gatcgcttcg gcctgctgcg cgccgccctc
     1981 aacgacgtga gcgactcgct gctctttccc gatcactcct cgcccgaccg cctcatccgg
     2041 caggtcacga acgaggcgcg ctggcgccgt gtgagctgac cgcgccggcg cgcaccgccg
     2101 ccgcgaacgc ggcgaagagc gcgcggtccc atgcttcggc ggtgtccgtg agctcttccg
     2161 gatgccattg cacgccggcc atccaccagt cgtcgcccga ccattccacg ccctcgacga
     2221 cgccgtccgg ggcgtgcgcc acggccacga ggccatcggc cacgcgcgcg atggcctgat
     2281 gatgcaggga gttggtgctc gcgtcggtcg caccgagggc gcgggcgagg cgcgatcccg
     2341 cggcgacgcg caggtcgtgc acgcggtcgc tccgccccca gctgccgt
//
LOCUS       DASSYW010000924         2685 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_915989, whole genome shotgun sequence.
ACCESSION   DASSYW010000924 DASSYW010000000
VERSION     DASSYW010000924.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2685)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2685)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2685
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_915989"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(132..1715)
                     /locus_tag="VFN38_14615"
     CDS             complement(132..1715)
                     /locus_tag="VFN38_14615"
                     /inference="COORDINATES: protein motif:HMM:NF015644.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0182 family protein"
                     /protein_id="HET9013056.1"
                     /translation="MTRRRVAFGALAAAALVLLLGRWIGALYTDFLWYDSLGAAEIWR
                     TRVATTLALSAGSFAVAALFAFVNLYAVRQSVVSLVLPRRIANVEIGEEVPGRYLLLA
                     VAVLAVVVGVALMLPGDDWSEALLARIGRPFGETDPYFGADLGFFVYWLPFETTLHVW
                     AILVFAVVTAIVVLLYALTPSLRWDRGRLYVSAYVRRHFTMLGGVLLFVLAWSYRLSM
                     YRLVAAGGGTAGVFNSIDHLVLVPAMLLLAVVTLCAALVVLWAGWSGQMRLAFLAVTV
                     VIALSVVARSVAPLLARRSIDPAVAVARERPYLATRLSYTRRAFGVDRMRPDTIGAGF
                     ASAAEAATRSALWDGATLAQSAERLRRVRVVGDGAAWQASGGVLTALLVEHSSDGALD
                     TRDVWGLSRFDPTGADERGMPVRTGSGVRFGDETLLDEPAVYDRAPDYSVVSDSLRRI
                     AGVEMVSTTSRIAHAWALQNFRLLFGEIPLDRPAIVRRRDVRERIRSLAPFFVQGSEV
                     VPVVAGDSLYWVIELYAAS"
     gene            complement(1717..>2685)
                     /locus_tag="VFN38_14620"
     CDS             complement(1717..>2685)
                     /locus_tag="VFN38_14620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase/phosphoglucomutase"
                     /protein_id="HET9013057.1"
                     /translation="NAAPTGGPPAAVRHEQVIDRYVADVAARIGPISRPMKVVYDCGN
                     GAGALVAPQLMRALGLDATGLFTESDGTFPNHHPDPTVPENLNDLVAAVRREGAEIGL
                     AFDGDADRIGMVDGEGRIVWGDHILILYARDVLARTGQGQPIIFDVKCSQALPDEIRR
                     AGGTPVMWKTGHSLIKDKMKELRAPLAGEMSGHMFFSEGFYGHDDALSGAARLLRIVA
                     DSGRTVRELLADVPEFVSTPEIRVDCDDALKFDLVRRAVEHFRARHDVIDVDGVRVLF
                     GDGWGLIRASNTQPIIVTRFEARTPQRLAEIRDEMDGWLRQQGAAV"
BASE COUNT          434 a          940 c          995 g          316 t
ORIGIN      
        1 acgggatcgg gcacggcggc cgccacgaga tgcacgcgcc cgctcgtggc attgagcacg
       61 gcggtcgccg cgtgctggaa gtatccgcgc tcttcgtcga gcacggtgaa ccgctgggag
      121 agcgggtacg cctacgaggc ggcgtagagc tcgatcaccc agtagagcga gtcccctgcc
      181 accaccggca cgacctcgct gccctgcacg aagaagggag cgagggagcg gatgcgctcg
      241 cggacgtcgc ggcggcgcac gatggcgggc cggtcgaggg ggatctcgcc gaacaggagg
      301 cggaagttct ggagcgccca cgcgtgcgcg atgcgcgagg tcgtggagac catctccacg
      361 ccggcgatcc gccgcagcga gtcggagacg accgaatagt cgggcgcccg gtcgtagacg
      421 gcgggctcgt cgagcagtgt ctcgtcgccg aagcggacgc cggaaccggt ccgtaccggc
      481 atcccgcgct cgtcggcgcc ggtggggtcg aagcggctga gcccccacac gtcgcgcgtg
      541 tcgagcgcgc cgtcgctgct gtgctccacg agcagcgcgg tgaggacgcc gccgctcgcc
      601 tgccacgcgg cgccgtcgcc cacgacgcgc acccggcgga gtcgctcggc ggactgcgcc
      661 agcgtcgcgc cgtcccagag ggccgagcgc gtcgcggcct ccgcggctga ggcgaagccg
      721 gcgccgatcg tgtcgggccg catccggtcc accccgaacg cgcggcgggt gtagctgagc
      781 cgcgtcgcga ggtagggacg ctcgcgcgcg acggcgacgg cggggtcgat ggaccggcgg
      841 gcgagcagcg gcgcgaccga gcgtgcgacc acgctgaggg cgatcaccac ggtgactgcc
      901 aggaacgcca gtcgcatctg ccccgaccag cccgcccaca gcacgaccag cgcggcgcac
      961 agcgtgacca cggcgagcag cagcatcgcc ggaacgagca ccaggtgatc gatggagttg
     1021 aacaccccgg cagtgccgcc gccggcggcc acgagccggt acatcgacag ccggtagctc
     1081 caggccagga cgaagagcag cacgccgccg agcatggtga agtgacgccg cacgtacgcc
     1141 gagacataga ggcggccgcg gtcccaacgg aggctcggtg tgagggcgta gagcaggacg
     1201 acgatcgccg tgacgacggc gaagacgagg atcgcccaca cgtgcagcgt cgtctcgaac
     1261 ggaagccagt agacgaagaa gcccagatcg gcgccgaaat aggggtcggt ctcgccgaac
     1321 ggacgcccga tgcgcgcgag cagcgcctcg ctccagtcgt cgcccgggag catgagcgcc
     1381 acgccgacga cgaccgcgag gacggcgacg gcgaggagga ggtaccggcc cggcacctcc
     1441 tcgccgatct cgacgttcgc gatgcgccgc ggcagcacga gcgacacgac cgattggcgc
     1501 acggcgtaca ggttcacgaa ggcgaacagc gcggccacgg cgaaggagcc ggcgctcagc
     1561 gccagggtgg tggcgacccg ggtgcgccag atctccgccg cgcccagcga atcgtaccac
     1621 aggaagtcgg tgtagagcgc gccgatccac cgccccagga ggaggaccag cgcggccgcc
     1681 gccagcgcgc cgaaggcgac ccgccggcgt gtcacgtcag accgcggcgc cctgctgtcg
     1741 cagccacccg tccatctcgt cgcggatctc ggccagccgc tggggcgtgc gggcctcgaa
     1801 gcgggtgacg atgatgggct gggtgttcga ggcgcggatc agcccccacc catccccgaa
     1861 cagcacccgc acgccgtcca cgtcgatcac gtcgtggcgg gcccggaagt gctcgaccgc
     1921 ccggcgcacg aggtcgaact tgagcgcgtc gtcacagtcg acgcggatct cgggggtgct
     1981 gacgaactcc gggacgtcgg cgagcagctc gcgcacggtg cgtcccgaat cggcgacgat
     2041 gcgcagcagg cgcgccgcgc cggagagcgc atcgtcgtgg ccgtagaagc cctcgctgaa
     2101 gaacatgtgg cccgacatct cgccggcgag gggggcacgg agctccttca tcttgtcctt
     2161 gatgagggag tggccggtct tccacatcac cggggtgccg ccggcgcgcc ggatctcgtc
     2221 ggggagcgcc tggctgcact tcacgtcgaa gatgatcggc tggccctgcc ccgtccgcgc
     2281 caggacgtcg cgcgcgtaga ggatgaggat gtggtcgccc cacacgatcc gcccctcgcc
     2341 gtccaccatg ccgatgcggt cggcgtcgcc gtcgaaggcg agaccgatct ccgccccctc
     2401 gcgccgaacg gccgcgacga ggtcgttcag attctcgggg acggtcgggt cgggatggtg
     2461 gttcgggaag gtgccgtcgc tctcggtgaa cagccccgtg gcgtccagcc cgagcgcgcg
     2521 catgagctgc ggcgccacga gcgcccccgc cccgttgccg cagtcgtaca cgaccttcat
     2581 cggccgggag attgggccga tccgggcggc gacgtcggcg acataccggt cgataacctg
     2641 ctcgtggcgc accgcggcgg gcgggccgcc ggtgggcgcg gcatt
//
LOCUS       DASSYW010000925         2078 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1468538, whole genome shotgun sequence.
ACCESSION   DASSYW010000925 DASSYW010000000
VERSION     DASSYW010000925.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2078)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2078)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2078
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1468538"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            158..1120
                     /locus_tag="VFN38_14625"
     CDS             158..1120
                     /locus_tag="VFN38_14625"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine dehydratase"
                     /protein_id="HET9013058.1"
                     /translation="MPELITLDDLTAAAARIAPVAVRTPLLPFDAASERLKADVWLKP
                     EMLQRGGAFKFRGAYNFLAQLSPAERSRGVIAPSSGNHAQAVALAAKLFGVKAVVVMP
                     TTVTPAKRGGAERLGARIELAGTTTQDRMDRAVELMEAEGLTMVPPYDHEWIIAGQGT
                     AGLEIAADMPDVETVLVPVGGGGLSAGVATAIKLRAPKARVIGVEPTGAPKLSRAREA
                     GHPVRIPSSGGLADGLLAVEVGGITFAHHERYVDDVVQVDDAALRCAMRLLLDRMKLI
                     AEPSGAITVAALMEGIVTPRGRTVAVLSGGNIEWGGLAPLVADA"
     gene            1125..>2078
                     /locus_tag="VFN38_14630"
     CDS             1125..>2078
                     /locus_tag="VFN38_14630"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HET9013059.1"
                     /translation="MNRCPTCGATYSAEARFCTRDGSKLVARQTMNLGTPARGTLSGR
                     GDKAEPLTHTNLVGQVLDGRYQIEKKVGEGGMAFVYRASDVSTREPYAIKVLSASLSR
                     DQNAMARLKREASLGMRLAHANVCHIIRLGETQDGLVYVVMPFVEGEILSDRNNRLGT
                     LGLDEVVRFVHDIAAGLQVAHELKIVHRDLKPENVMIRTDPDGTERAVVMDFGLAKER
                     RADAELQKLTATGIILGTPEFMSPEQLRGKTLDARTDVYSLALMTFEMLTGKLPFAGR
                     TQQEMMIARLRSEPTLLRQARPDLDLPEPVERVLLKAMSREA"
BASE COUNT          325 a          719 c          749 g          285 t
ORIGIN      
        1 ctgtcatccc gcacgagcgt agcgagtgtc gggatctgct gtcacgtgtt ggtggccagc
       61 tccgggaccg ggagagtaga tcccgacagc cgctggggcg gctgcgggat gacagggccg
      121 atttacctcg taccgatcgc ggtggtagct tccaaccatg cccgagctga tcaccctgga
      181 tgacctgacc gccgccgccg cgcggatcgc accggtcgcg gtgcgcacgc cgctgctgcc
      241 gttcgacgcg gcgtcggagc ggctgaaggc ggacgtctgg ctcaagcccg agatgctcca
      301 gcgcggcggg gccttcaagt tccgcggcgc gtacaacttc ctcgcccagc tgtccccggc
      361 cgagcgttcg cgcggcgtga tcgccccatc gtcgggcaac cacgcgcagg ccgtggcgct
      421 cgccgcgaag ctcttcggcg tgaaggcggt ggtggtgatg ccgaccaccg tcacgccggc
      481 caagcgcggc ggcgccgagc ggctcggcgc gcgcatcgag ctggcgggga ccaccacgca
      541 ggaccggatg gaccgcgccg tggagctgat ggaggcggag gggctcacca tggtgccccc
      601 gtacgatcac gaatggatca tcgcggggca ggggacggcg ggactcgaga tcgccgccga
      661 catgcccgac gtggagaccg tgctcgtgcc ggtgggcggg ggtgggctca gcgccggcgt
      721 cgccaccgcc atcaagctgc gtgcacccaa ggcgcgcgtg atcggcgtgg agccgaccgg
      781 cgcccccaag ctctcgcgcg cgcgggaagc ggggcatccg gtgcgcatcc cctcgagcgg
      841 cgggctcgcc gacgggctgc tcgccgtgga agtgggcggc atcaccttcg cgcaccacga
      901 acgctacgtg gacgacgtcg tgcaggtgga cgacgcggcg ctccgctgcg cgatgcggct
      961 gctgctcgac cgcatgaagc tcatcgcgga gccgagcggc gcgatcaccg tcgccgcgct
     1021 gatggaaggc atcgtgacgc cgcgcggtcg cacggtggcc gtgttgagcg gcggcaacat
     1081 cgaatggggc gggctcgccc cgctcgtcgc cgacgcgtga cgccatgaat cgctgcccga
     1141 cctgcggcgc gacctattcc gccgaagcgc gcttctgcac gcgcgacggt tccaagctcg
     1201 ttgcccgcca gacgatgaac ctggggacgc cggcccgcgg gacgctcagc gggcgcggag
     1261 acaaggcgga gccgctcacc cacaccaacc tcgtgggcca ggtgctcgac gggcgctacc
     1321 agatcgagaa gaaggtcggc gagggaggga tggcgttcgt gtaccgggcg agcgacgtct
     1381 cgaccaggga accgtatgcg atcaaggtgt tgtcggcctc gctctcccgc gaccagaacg
     1441 cgatggcccg cctcaagcgc gaagccagcc tcggcatgcg cctcgcccac gcgaacgtct
     1501 gccacatcat ccgcctgggc gagacgcagg acgggctggt gtacgtggtg atgccgttcg
     1561 tggaaggcga gatcctctcc gaccgcaaca accgtctcgg cacgctgggc ctggacgagg
     1621 tcgtgcggtt cgtgcacgac atcgcggccg gcctccaggt cgcgcacgag ctcaagatcg
     1681 tgcatcgcga cctcaagccg gagaacgtca tgatccgcac cgatcccgac gggacggagc
     1741 gcgccgtcgt gatggacttc ggcctcgcca aggaacgccg cgccgacgcc gagctccaga
     1801 agctgacggc caccggcatc atcctcggca cgccggagtt catgagtccc gagcagctgc
     1861 gcggcaagac cctcgacgcg cgtaccgacg tctactcgct cgcgctgatg acgttcgaga
     1921 tgctgaccgg caagctgccg ttcgccggcc gcacgcagca ggagatgatg atcgcgcggc
     1981 tgcgcagcga gccgacgctg ctgcggcagg cccggcccga cctcgatctc cccgagccgg
     2041 tggagcgggt gctgctgaag gcgatgagcc gcgaggcc
//
LOCUS       DASSYW010000926         2238 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_95343, whole genome shotgun sequence.
ACCESSION   DASSYW010000926 DASSYW010000000
VERSION     DASSYW010000926.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2238)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2238)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2238
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95343"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..387
                     /locus_tag="VFN38_14635"
     CDS             <1..387
                     /locus_tag="VFN38_14635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013060.1"
                     /translation="RFPMIDVARGGSVQGLLDALNRLMDMTIYNLPIQWNDDRTLLVP
                     GHGRVYDKLDLLEYRDAVTIVRDRVEDLIKEGKTLEQVKAANPTLGYRSEYGTDRGDW
                     TTDMFVETMFKELSTKKTAPSAARAK"
     gene            387..1199
                     /locus_tag="VFN38_14640"
     CDS             387..1199
                     /locus_tag="VFN38_14640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013061.1"
                     /translation="MRAHTRFLAVAAALALGAAATRVDAQRGGGPGGPPAGPARTVAP
                     IDLTGYWVSIVSMDWRWRMVTPAKGDYSGIPMNAASKTGADAWDPAKDEAAGEQCKSY
                     GAPAIMSVPGRLHITWQDDTTLKVETDAGQQTRLLAFGPVPPVKPPRSWQGMSAAQWQ
                     MSSPGLPLMLRPQERAADMPAPAAARGGTLKVTTTNLRAGYLRKNGVPYSADAVLTEY
                     WDVTKNGNDTLLTVTQIVDDPTYLRTRRLIAYPFKKEANGDKWDPTPCSARW"
     gene            1205..2194
                     /locus_tag="VFN38_14645"
     CDS             1205..2194
                     /locus_tag="VFN38_14645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013062.1"
                     /translation="MSRRLFTLVLLCSLTATAPALAQSDLSGWWARQSQNDNGYANEP
                     VDLIGIPVSADGRAKALSYNIASLSATERQCQMYTPWYILYGPFPLQIISEQDPVTQK
                     LLAYRIAGWGDKGEQMVWMDGRPHPSPNAPHTHGGFSTGTWEGTSLKVVTTHFKMGDM
                     KRHRAFSSDRAKMTYTLTRHDDILTVTGILEDPVYLAEPFVLTEIFQRSSDTSFFPLT
                     ACEPIEELPYLHENPALVPHYLPGKNPFMNEMTQKKGIPLEAVLGGPETIYPEYRKKL
                     KDTYKAPAKCEDSCGGPPAPRGGGPGQGGRGAAPPAGRGAAPPAAGRGAPPAK"
BASE COUNT          407 a          739 c          767 g          325 t
ORIGIN      
        1 cgctttccga tgatcgacgt cgcccgcggc ggcagcgtgc aggggctgct cgacgcgctg
       61 aaccggctga tggacatgac tatctacaat ctgcccatcc agtggaacga cgaccgcacc
      121 ctgctggtgc cggggcacgg ccgcgtctac gacaagctgg atctgctcga gtatcgcgac
      181 gcggtcacca tcgtgcgtga tcgggtggag gacctgatca aagaagggaa gaccctggag
      241 caggtgaagg ccgccaaccc gacgctcggc tatcgcagcg agtacggcac ggatcgcggc
      301 gactggacca ccgacatgtt cgtcgagacg atgttcaagg agctgtcgac caagaagacg
      361 gccccgtcgg ccgcgagggc gaagtgatgc gcgcacacac acggttcctt gccgtcgcgg
      421 ccgcgctcgc ccttggcgcc gccgcgacac gcgtggacgc gcaacggggc ggtggccccg
      481 gcggccctcc cgccggaccg gcccgcaccg tggccccgat cgatctcacc ggttactggg
      541 tgtcgatcgt gtcgatggat tggcgctggc ggatggtcac gcccgccaaa ggcgactatt
      601 ccggtatccc gatgaacgcc gcgtcgaaaa ccggcgcgga cgcatgggat ccggcgaaag
      661 acgaggccgc cggcgagcag tgcaagtcgt atggcgcgcc cgcgatcatg agcgtcccgg
      721 gacggctgca catcacctgg caggacgaca ccacgctgaa ggtcgagacc gacgcagggc
      781 agcagacgcg gctcctcgcg ttcggtccgg tcccgcccgt gaagccgccg cggagctggc
      841 aaggcatgtc ggcggcgcag tggcagatgt cgtcgccggg gctgccgctg atgctgcggc
      901 cgcaggagcg cgcggccgac atgcccgcgc cggccgccgc gcgaggcggc acgctgaagg
      961 tgacgacgac caacctgcgc gcgggctatc tgcgcaagaa cggtgtgccc tatagcgcgg
     1021 atgccgtgct cacggagtac tgggacgtga cgaagaacgg caacgacacg ctgctcacgg
     1081 tgacgcagat cgtcgacgac ccgacgtacc tgcgcacgcg ccgtttgatt gcgtatccct
     1141 tcaagaagga ggcgaacggg gacaagtggg atcccactcc ctgttcggcc cgctggtgag
     1201 cgccatgtcg agacgtctct tcacgctggt cctgttgtgc tctctcaccg ccacggcgcc
     1261 ggcgctggcg cagtcggatc tgtcgggatg gtgggcgcgc cagtcgcaga acgacaacgg
     1321 ctacgcgaac gagccggtcg atctgatcgg cattcccgtc agcgccgacg gtcgcgccaa
     1381 agcattgagt tacaacattg cgtcgctgtc ggccaccgag cggcagtgcc agatgtatac
     1441 gccgtggtac atcctgtacg gaccgtttcc tctgcagatc atctcggagc aggatccggt
     1501 cacgcaaaag ctcctggcct accggatcgc gggctggggc gacaagggcg aacagatggt
     1561 ctggatggac ggccgtccgc acccgtcgcc gaacgcgccg cacacgcacg gcgggttctc
     1621 caccggcacg tgggagggca ccagcctcaa ggtcgtcacg acgcacttca agatgggcga
     1681 catgaagcgg caccgcgcgt tcagcagcga ccgcgccaag atgacgtaca cgttgacgcg
     1741 gcacgacgac atcctgacgg tgacggggat actcgaggac ccggtgtatc tcgccgagcc
     1801 gttcgtcctc accgagatct tccagcgctc gagcgacacc agcttctttc cgctcacggc
     1861 gtgcgagccg atcgaggagc tgccgtacct ccacgagaac ccggcgctcg tgccgcatta
     1921 cctcccgggc aagaatccgt tcatgaacga gatgacccag aagaagggca ttccgctcga
     1981 ggcggtgctg ggtggtccgg agacgatcta cccagagtac cggaagaagc tgaaggacac
     2041 ctacaaggca cccgccaagt gcgaggattc gtgcggcgga ccgccggcgc cccgcggcgg
     2101 cgggcccggg cagggcggtc gaggcgccgc gccaccggct ggacgaggag ccgcgccgcc
     2161 ggctgcgggc cgtggggcgc cgccggcgaa gtaaggccgg cacttatatc acttgggtta
     2221 cgatcgccgc gtacacgg
//
LOCUS       DASSYW010000927         2243 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_545463, whole genome shotgun sequence.
ACCESSION   DASSYW010000927 DASSYW010000000
VERSION     DASSYW010000927.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2243)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2243)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2243
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_545463"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..382)
                     /locus_tag="VFN38_14650"
     CDS             complement(<1..382)
                     /locus_tag="VFN38_14650"
                     /inference="COORDINATES: protein motif:HMM:NF012492.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HET9013063.1"
                     /translation="MRAALASHRAAVVVAPPGTGKTTRVPPAVADAGRVVVLQPRRVA
                     ARSVARRIADEQGWTLGREVGWHVRFDRRFSADTRVLIVTEGMLTHYLHEDPLLTDVS
                     TVVLDEFHERSLHTDLGLALVAEAW"
     gene            complement(431..952)
                     /locus_tag="VFN38_14655"
     CDS             complement(431..952)
                     /locus_tag="VFN38_14655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013064.1"
                     /translation="MVAALLVLLALAQDPANVTRQVFEVSGKVDRVNRSARTITVVRI
                     GTVSEPIYVGPDLAVFDQLKRGDFVVVRFYDSYTVERTPGKKMGPPEMVTGAELDALK
                     TDDARVTQRTRITVTIDAIEMATGSVTYHGSDNRRVFRVVQDRKLLEGLSVGDVVTIT
                     YTRAQAVSVDRVP"
     gene            1002..2213
                     /locus_tag="VFN38_14660"
     CDS             1002..2213
                     /locus_tag="VFN38_14660"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: protein motif:HMM:NF005154.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004072 - aspartate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HET9013065.1"
                     /translation="MSIVVQKYGGSSVADVGKLRYVAERVMQTVRRGHQVVVVVSAMG
                     DTTDELLAMAKQVSPNPERRELDMLLSAGERISMALLSLAIRELGGDAISFTGSQSGI
                     ITNDRHIDARIIEVRPFRVQDELARGRIVVVAGYQGVSYKREVTTLGRGGSDTTAVAM
                     AAALDAEYCEICSDVDGVYSADPRVVPNARRIGSLSYEETQEMAEAGAKVLNAQAVEF
                     AKEKGIAIYARATQGPLPGPDPSADGTVVRKSPPRMPGTVAGIASERDLLVLEGSAPP
                     ADVLALLAERRVPGKQLHVFDGRTTVVISRENLHDEGQLKEGLQTRLGGRARLVDGHA
                     AVSASGAGINATYDNVLTGSATLAGIGIAAAGIATSSFRITWLVPDDRVKDAVRALHA
                     RFVEQNRPLVP"
BASE COUNT          364 a          748 c          806 g          325 t
ORIGIN      
        1 gccacgcttc ggccacgagc gcgagaccga ggtcggtgtg caggctgcgc tcgtggaact
       61 cgtcgaggac gacggtggag acgtccgtga gcagcggatc ctcgtggagg tagtgcgtca
      121 gcatgccctc ggtgacgatg agcacgcggg tgtcggccga gaagcggcgg tcgaagcgga
      181 cgtgccaccc cacttcgcgc ccgagggtcc agccctgttc gtcggcgatg cggcgcgcga
      241 ccgagcgtgc cgcgacgcgg cgcggctgca gcacgaccac gcgcccggcg tccgccaccg
      301 ccggcggcac gcgtgtggtc ttgccggtgc ccggcggagc gacgacgact gccgcgcgat
      361 gcgaggcgag ggcggcgcgc acctccggga ggtgcgcatc gactggcagc ggggcgcgag
      421 gcacctgggg ttacggcacg cggtcgaccg acacggcctg cgcccgcgtg taggtgatgg
      481 tgaccacgtc accgacgctc aggccttcca gaagcttgcg atcctgcacg acgcgaaaca
      541 cgcggcggtt gtcggacccg tgataggtga ccgacccggt cgccatctcg atcgcatcga
      601 tcgtcacggt gatccgcgtc cgctgcgtca cgcgggcgtc gtccgtcttc agcgcatcca
      661 gctcggcacc agtcaccatc tcgggcggcc ccattttctt cccgggcgtg cgctcgacgg
      721 tgtacgagtc gtagaagcgg acgacgacga agtcgccgcg cttgagctgg tcgaagaccg
      781 ccagatcggg accgacgtag atcggctccg agactgtgcc aatcctcacg acggtgatcg
      841 tacgcgccga gcggttgaca cgatcgacct tgcctgagac ttcgaacacc tggcgggtga
      901 cgtttgccgg atcctgcgcc agtgccagca gaacgagcag tgccgcgacc atgagctcga
      961 ttctaccgaa acggtttggg atgaggcctt accatttggt catgtcgatc gtggtgcaga
     1021 agtacggcgg cagcagcgtc gccgacgtcg gcaagcttcg atacgtcgcc gagcgcgtga
     1081 tgcagaccgt gcggcgcgga caccaggtgg tggtcgtcgt ctccgcgatg ggcgacacca
     1141 ccgacgagct gctggccatg gccaagcagg tgtcgccaaa cccggagcgc cgcgagctcg
     1201 acatgctgct ctcggcgggc gagcgcatct cgatggcgct gctgtcgctg gccatccgcg
     1261 agctcggcgg cgacgcgatc agcttcaccg gcagccagtc cggcatcatc acgaacgatc
     1321 gccacatcga cgcgcgcatc atcgaggtgc ggcccttccg cgtgcaggac gagctggcgc
     1381 gcggccgcat cgtcgtcgtc gccggctatc agggcgtgtc gtacaagcgc gaggtcacga
     1441 cgctggggcg cggcgggagc gacacgacgg cggtggccat ggccgcggcg ctcgacgcgg
     1501 aatactgcga gatctgctcg gacgtagacg gcgtgtactc cgccgaccct cgagtggtgc
     1561 cgaacgccag gcggatcgga tcgctctcct acgaagagac gcaggagatg gcggaagcgg
     1621 gcgcgaaggt cctgaacgcc caggcggtcg aattcgcgaa ggagaaaggg atcgccatct
     1681 acgcgcgcgc gacgcagggg ccgctgccgg gtccggaccc gtccgcggac ggcacggtgg
     1741 ttcgcaaaag tccgccgcgc atgcctggca cggtcgccgg catcgcgagc gagcgggacc
     1801 tgctggtgct cgagggcagc gcgccgccag ccgacgtgct ggcgctgctc gccgagcgcc
     1861 gcgtgccggg caaacagctg cacgtgttcg acgggcgcac gacggtggtg atttcgcgcg
     1921 agaacctgca cgacgagggg cagctgaaag aagggctgca gacgcgactc ggcggacgcg
     1981 cgcgtctggt cgacggccac gccgccgtga gcgccagcgg cgccggcatc aacgccacct
     2041 acgacaacgt cctgaccggt tcggccacgc tggctggtat cggaatcgcc gccgccggca
     2101 tcgcgacgtc atcgttccgc atcacctggc tggtgcccga cgatcgggtg aaagacgccg
     2161 tgcgcgcgct ccacgcgcgc ttcgtcgaac agaaccggcc gctcgtgccg tgactcatct
     2221 tcccgatgcc gacgggtggc ggc
//
LOCUS       DASSYW010000928         2118 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1335723, whole genome shotgun sequence.
ACCESSION   DASSYW010000928 DASSYW010000000
VERSION     DASSYW010000928.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2118)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2118)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2118
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1335723"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..646)
                     /locus_tag="VFN38_14665"
     CDS             complement(<1..646)
                     /locus_tag="VFN38_14665"
                     /inference="COORDINATES: protein motif:HMM:NF024968.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HET9013066.1"
                     /translation="MHVLFYHAAKDWSGASRVFAVAAQGLAAHGDTVTVVCRADSAAE
                     QAFASQGLDVVPLPMNDSVSRDAWRLRTVLKDRQIEVVFLHSEHEQLVASSAMRLGGR
                     GTVIRRIPAGGVASAGRGGRLAAKMATSRLLFSTEMDRDRAGVGERGFLAPLGVDIAK
                     ADEMRMTSRGTLGVEPGTQLMVCVADRKAKSRITTALRTVALLAPRHPELRLALV"
     gene            complement(649..>2118)
                     /locus_tag="VFN38_14670"
     CDS             complement(649..>2118)
                     /locus_tag="VFN38_14670"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HET9013067.1"
                     /translation="LPLGYFQRTKTGQIISRVLADTEQTKALITELVTRTLQNLAQIV
                     GTIVILLNYSVRLTFVALVIAPLLTLSLQPVLRKLRKGHRRLRGDYGEITSVLQEVVS
                     GVRLVKSFRGEAYEDRRFAEASHRYSSGMVRITRVASLSQPMTEMIGTSVAMLILWIG
                     AREVLAGTGTMDSATLMTFMIMVMRLLPPLKQLSQAPTTAQQSFASAERLFEVLDLPT
                     EQRLDHGTREATALRDTLAFDRVSFAYDDEPVLRDVSFVARRGDVIALVGASGAGKST
                     LVDLIPRFYEPTSGVIRLDGVDTREIGLASLRGLTGIVSQDTVLFNDTVRNNIAYGAA
                     GRFTDAQVEAAARAANAHGFIGELPQGYDTVLGERGTRLSGGQRQRLAIARALLTDPP
                     IPILDEATSALDTESERLVQEAIDRLLAGRTVFVIAHRLSTVVHADQILVLDRGEIVE
                     RGTHAELLAQRGTYHRLHAAQLRRDDAAAATSTAAAGAR"
BASE COUNT          307 a          746 c          767 g          298 t
ORIGIN      
        1 cgacgagggc gagccgcagc tcggggtgcc gcggcgcgag cagggcgacg gtgcggagcg
       61 ccgtggtgat gcggctcttg gccttccggt cggccacgca caccatgagc tgggtgccgg
      121 gctccacgcc cagggtgccg cgcgacgtca tgcgcatctc gtcggccttc gcgatgtcca
      181 cccccagcgg ggccaggaag ccgcgctcgc cgacgccggc cctgtcgcga tccatctcgg
      241 tgctgaacag cagccgcgac gtcgccatct tcgcggcgag ccggccgccc cggccggccg
      301 acgccacccc gcccgcggga atgcgacgga tcacggtgcc gcgcccgccg agccgcatcg
      361 ccgagctggc gacgagctgc tcgtgctccg agtgcaggaa caccacctcg atctggcggt
      421 ccttcagcac ggtgcgcagc cgccacgcgt cgcggctcac cgagtcgttc atcggcaggg
      481 gcacgacgtc cagcccctgg ctcgcgaacg cctgctcggc cgcgctgtcg gcgcgacaga
      541 ccacggtgac ggtgtcgccg tgcgcggcga gcccctgcgc cgcgacggcg aacacgcgcg
      601 aggcgcccga ccagtccttc gcagcatgat agaacaggac gtgcatcgtc agcgggctcc
      661 cgccgcggcg gtggaggtgg ccgcggcggc gtcgtcgcgc cgcagctggg cggcgtgcaa
      721 ccggtggtag gtcccgcgct gcgcaagcag ctcggcatgg gtaccgcgct cgacgatctc
      781 accccggtcg agtacgagaa tctggtctgc gtgcacgacg gtcgagagac ggtgggcgat
      841 gacgaagacg gtgcgacccg cgaggaggcg gtcgatcgcc tcttgcacga gtcgttccga
      901 ttcggtgtcg agggccgacg tggcctcgtc gaggatgggg atgggcggat cggtgaggag
      961 cgcgcgggcg atggccaggc gctggcgctg gccacccgac agccgggtgc cccgctcgcc
     1021 gagcacggtg tcgtagccct gcggcagctc gccgatgaag ccgtgcgcgt tggccgcgcg
     1081 ggcggcggcc tccacctgcg cgtcggtgaa ccgccccgcg gccccgtagg cgatgttgtt
     1141 ccgcacggtg tcgttgaaca ggacggtatc ctggctcacg atgccggtga gcccgcgcag
     1201 cgacgcgagg ccgatctcgc gggtatccac gccgtcgagg cggatcacgc cgctcgtcgg
     1261 ctcgtagaag cgggggatga gatcgacgag ggtgctcttc cccgccccgc tcgcccccac
     1321 gagggcgatg acgtcccccc gcctcgccac gaagctcacg tcgcgcagca ccggctcgtc
     1381 gtcgtatgcg aaggagaccc gatcgaacgc cagcgtgtcc cgcagcgccg tcgcctcgcg
     1441 cgtgccgtgg tccagccgct gctccgtggg gaggtcgagc acctcgaaca gccgctccgc
     1501 cgaggcgaac gactgctgcg ccgtggtcgg cgcctgcgac agctgcttga gcggcggaag
     1561 cagccgcatg accatgatca tgaaggtcat cagcgtcgcg ctgtccatcg tgccggtgcc
     1621 ggccagcacc tcgcgcgcgc cgatccagag gatcagcatc gccaccgagg tgccgatcat
     1681 ctcggtcatc ggctgggaca gcgacgccac gcgcgtgatg cgcaccatgc cggacgagta
     1741 gcggtgactc gcctcggcga accggcgatc ctcgtaggcc tcgccgcgga acgacttcac
     1801 cagccgcact ccgctcacca cctcctggag cacgctcgtg atctcgccgt agtcgccacg
     1861 caggcggcgg tggcccttgc gcagcttgcg cagcacgggc tggagcgaca gcgtgagcag
     1921 cggcgcgatc acgagggcga cgaaggtcag ccgcaccgag tagttgagca ggatgacgat
     1981 ggtgccgacg atctgcgcga ggttctggag cgtgcgcgtg accagctcgg tgatgagcgc
     2041 cttggtctgc tcggtatcgg cgagcacgcg cgagatgatc tgccccgtct tcgtgcgctg
     2101 gaagtagccg agcggcag
//
LOCUS       DASSYW010000929         2123 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_322285, whole genome shotgun sequence.
ACCESSION   DASSYW010000929 DASSYW010000000
VERSION     DASSYW010000929.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2123)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2123)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2123
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_322285"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            238..>2123
                     /locus_tag="VFN38_14675"
     CDS             238..>2123
                     /locus_tag="VFN38_14675"
                     /inference="COORDINATES: protein motif:HMM:NF039587.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5916 domain-containing protein"
                     /protein_id="HET9013068.1"
                     /translation="MRPFPTLVAGLLTVAAAAPLASQQPRRDSARVAPAVAVRAERPP
                     TIDGKDDDEVWRGAPPTSEFLEFQPSEGKAPRYRTEFRAAYDDRNLYVFVRAFDPHPD
                     SIMTALTRRDVRGPSDQLKLMIDAYHDRQSGFEFAVNPVGVKRDYAMYNDRDEDDTWD
                     GVWDVGTRIDSLGWTAEFRVPFSQLRYANKREHEFGFAVWRDIERYKERTSWPLYRQS
                     QGGISSQLGVLTGIRDIVPFHRLEVVPFTVAKSSSVPITSAAPGESPWGRSQKLSAGA
                     DLKYGITSNLTLDATVNPDFGQVEADPSVVNLSAFETFFQERRPFFIEGSGFYNFDLN
                     CSVVNCSGEGLFYSRRIGRSPQLFGRYADDASPNVSPILGAAKLTGRLPGGLNVGALE
                     AVTGRVGGMLDRTTEPRTSYTVLRAQQDLRNGATTVGIIATGVNRALDQWTEKYLRHD
                     AYVAGANLRHRWSPSRYEVTGSVTKSQVRGTPEAILSTQLNSVHLYQRPDGGLGLDPT
                     RTSLAGDAEEVTFGKFGGNMIHYQTSWQRQSPGFETNDLGYLRRANQQSFNNWMGINW
                     RTPTRVYRSMTGNFNAWGYWTADGLNTEKAVNTNWHVNLANNMWVHAGTTQSQLHGTF
                     CDNCA"
BASE COUNT          358 a          778 c          677 g          310 t
ORIGIN      
        1 aacgagctgt gcgcgaaggt cgcggagatg ctgcgggcgc cgcgtccggc gttcgacgcc
       61 cccgagtagc ctcgggccgc cggccagccg tcatcacaac ggcgcctctc agcccttgac
      121 gaatggccgt cggtgctgaa aattcggcac ggttgatttt tcagcagacc aactccggcg
      181 gcccccccgc tgtctcaggg gcatcgggtc ggctcccact cattcgtgca ggcatcgatg
      241 cgccccttcc ccaccctcgt cgctggcctc ctcaccgtcg ccgcggcggc gccgctcgcc
      301 tcccagcagc ccaggcgcga cagcgctcgc gtcgctcccg cggtggccgt gcgcgccgag
      361 cggccgccga cgatcgatgg caaggacgac gacgaggtgt ggcgcggcgc gccgccgacc
      421 tccgagttcc tcgagttcca gccgtccgag ggcaaggccc cccgctaccg gaccgagttt
      481 cgcgccgcct acgacgaccg gaatctctac gtcttcgtcc gcgcgttcga tccgcacccg
      541 gacagcatca tgaccgcgct cacgcggcgc gacgtgcgcg gcccctccga tcagctcaag
      601 ctgatgatcg atgcctacca cgatcggcag tcgggcttcg agttcgccgt caatcccgtc
      661 ggcgtgaagc gcgactacgc gatgtacaac gatcgcgacg aggacgacac ctgggacggc
      721 gtctgggacg tcggcacgcg catcgactcg ctcggatgga cggcggagtt ccgggtgccc
      781 ttctcgcagc tccgatacgc caacaagcgc gagcacgagt tcggcttcgc ggtctggcgc
      841 gacatcgagc gctacaagga gcgcacgagc tggccgctct accggcagtc gcagggcggc
      901 atctcgtcgc agctcggcgt gctcacgggc atccgggaca tcgtcccctt ccaccgcctc
      961 gaggtggtgc ccttcaccgt ggccaagagc tcgtcggtcc cgatcacgag tgcggcgccc
     1021 ggcgaatcgc cgtggggacg ctcgcaaaag ctgtcggcgg gggcggacct caagtacggg
     1081 atcacgtcca acctcaccct ggacgccacc gtgaaccccg acttcggcca ggtcgaagcc
     1141 gatccctccg tggtgaacct cagcgccttc gagaccttct tccaggaacg gcgccccttc
     1201 ttcatcgaag gctcggggtt ctacaacttc gacctcaact gcagcgtcgt gaactgcagc
     1261 ggtgagggac tgttctactc ccgccgcatc gggagatcgc cccagctctt cggccgctac
     1321 gccgacgatg cctctcccaa cgtgtcgccg atcctcggcg ccgcgaagct gaccggccgc
     1381 ctgcccggcg gcctgaacgt cggcgcgctg gaagcggtga cggggcgggt gggcgggatg
     1441 ctcgaccgca ccacggagcc gcgcaccagc tataccgtgc tgcgcgcgca gcaggacctc
     1501 cgcaatggcg ccacgacggt gggcatcatc gccaccggcg tgaatcgcgc gctggaccag
     1561 tggaccgaga agtacctgcg gcacgacgcg tacgtcgccg gcgccaacct gcggcaccgc
     1621 tggagcccga gccgctacga ggtgaccggc agcgtgacga agagccaggt ccgcggcacg
     1681 ccggaggcga tcctgtccac gcagctcaac tcggtgcacc tgtaccaacg ccccgacggc
     1741 ggactcgggc tcgatccgac gcgcacctcg ctcgccggcg acgccgagga ggtcacgttc
     1801 ggcaagttcg gcggcaacat gatccactac cagacgagct ggcagcggca gtcgcccggc
     1861 ttcgagacga acgacctcgg ctacctccgc cgcgccaacc agcagagctt caacaactgg
     1921 atggggatca actggcgcac cccgacgcgc gtctatcgct cgatgacggg caacttcaac
     1981 gcgtggggct actggaccgc cgatggcctg aacaccgaga aggcggtgaa caccaactgg
     2041 cacgtgaacc tggcgaacaa catgtgggtc cacgccggca ccacgcagag ccagctgcac
     2101 ggcaccttct gcgacaactg cgc
//
LOCUS       DASSYW010000930         2105 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1483066, whole genome shotgun sequence.
ACCESSION   DASSYW010000930 DASSYW010000000
VERSION     DASSYW010000930.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2105)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2105)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2105
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1483066"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..264)
                     /locus_tag="VFN38_14680"
     CDS             complement(<1..264)
                     /locus_tag="VFN38_14680"
                     /inference="COORDINATES: protein motif:HMM:NF012383.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyltransferase family protein"
                     /protein_id="HET9013069.1"
                     /translation="MAAPTVQLRIFRDRREAGRLLAEALRRLTLEDPVVLGLPRGGVP
                     VAYEVARALDAPLDVLVARKIGAPSDPEFAIGAVAEGGVEVLDH"
     gene            complement(275..508)
                     /locus_tag="VFN38_14685"
     CDS             complement(275..508)
                     /locus_tag="VFN38_14685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013070.1"
                     /translation="MGVCEVCGNDYDATMDLIVGGEAHVFDSFECAIHAVAPRCQHCG
                     CPIIGHGAQAGERVYCCAHCAHQAGAAEIRDRT"
     gene            complement(604..1500)
                     /gene="prs"
                     /locus_tag="VFN38_14690"
     CDS             complement(604..1500)
                     /gene="prs"
                     /locus_tag="VFN38_14690"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR01251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004749 - ribose phosphate diphosphokinase
                     activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate diphosphokinase"
                     /protein_id="HET9013071.1"
                     /translation="MVLTLPGFHRILGTDLDAVALEPARFANGELVVRLPRPVAGRAC
                     VLVGSVSPPEERLAILLLAADTLKRHGAVHVEVVLPYLAYTRQDRLEAQTSLACAWLG
                     RVLKASGIDTVLTVDVHSGEAVRLLGLPVRSLSPAAVLADALRDVDDAAVIVAPDEGA
                     RGRAGELAAALGAHHPRVWLRKRRTRAGVEHVSLHGEVRPSAVVVDDILDTGGTLISC
                     CHELRRRGVHTIDIAVTHGLFTGDGWRELLGLVRTIHVTDTVPEAQAHAGPSVRVHGV
                     ARLLRAALAGPGGARARESRVR"
     gene            1745..>2105
                     /locus_tag="VFN38_14695"
     CDS             1745..>2105
                     /locus_tag="VFN38_14695"
                     /inference="COORDINATES: protein motif:HMM:NF012241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HET9013072.1"
                     /translation="MARTITRWEPFAELADMRQRFDRLLGELGDGEREWMPAIDMVRD
                     DGDLVVRAEVPGIKPEEIEIKAEEGTLTISGKHEEAKEEKGKHFVRRERRYGAFSRTM
                     ALPDGVDPKKIRASTHDG"
BASE COUNT          337 a          739 c          765 g          264 t
ORIGIN      
        1 gtggtcgagg acctcgacgc cgccctctgc cacggcaccg atcgcgaact cgggatcgct
       61 gggcgcgccg atcttgcgcg caacgaggac atcgagcggg gcgtcgaggg cgcgagcgac
      121 ctcgtaggcg accggcacgc cgccgcgggg aaggccgagc acgaccggat cctcgagcgt
      181 gagccggcgc agcgcctccg cgagcagccg tccggcctcg cggcggtcgc ggaagatcct
      241 cagttggacg gtgggtgccg ccatggtcgc ctcctcacgt gcgatcgcgg atctcggccg
      301 cgcccgcctg gtgtgcgcag tgcgcgcagc agtagacgcg ctcgccggcc tgcgcgccgt
      361 ggccgatgat cggacagccg cagtgctggc agcgcggcgc gaccgcatgg atcgcgcact
      421 cgaagctgtc gaagacgtgc gcctcgccgc cgacgatcaa atccatcgtc gcgtcgtagt
      481 cgttgccgca gacctcgcac acgcccatga gtgctcctcg atcgctgagt ggatggtgcg
      541 cgcgagcatc ccgcgccagc gcggccgcga catccgcgga ggtgcgcatg cctctgcgga
      601 ggactaccga acccgcgact cgcgcgcgcg agctccgccc gggcccgcaa gcgccgcccg
      661 caggagtcga gccaccccgt ggacccggac cgaggggccg gcatgggcct gcgcctcggg
      721 caccgtgtcg gtgacgtgaa tcgtgcggac caggcccagc agctcgcgcc agccatcgcc
      781 ggtgaagagg ccgtgcgtga cggcgatgtc gatcgtgtgc acgccacggc ggcgcagctc
      841 gtgacagcag gagatcagcg tgccgccggt gtcgaggatg tcatcgacca caacggcgct
      901 cgggcggacc tcgccgtgca gcgagacgtg ctcgacgccc gcgcgagtgc gccgcttccg
      961 caaccagacc cggggatggt gggcgccgag cgccgcggcg agctcgccgg cacgcccgcg
     1021 cgcaccctcg tcgggcgcga cgatcaccgc agcgtcatcg acgtctcgca acgcatcggc
     1081 gagcaccgcc gccggcgaca gcgagcgcac cggaagtccc agaagccgga cggcctcgcc
     1141 gctgtggacg tcgacggtca ggacggtgtc tatgccggag gccttcagca cgcggcccaa
     1201 ccacgcgcac gccaggctcg tctgcgcctc cagccggtcc tggcgcgtgt aggccaggta
     1261 cggcagcacg acctcgacgt ggacggcgcc gtggcgcttg agcgtgtcgg cggccagcag
     1321 caggatcgcc agccgctcct ccggcggcga caccgagccc accagcacgc acgcgcgccc
     1381 ggcgaccggc cgcggcagac gcacgaccag ctcgccgttg gcgaaccgtg ccggctcgag
     1441 cgcgacagcg tcgagatcgg ttcccaggat ccgatggaag ccgggcagcg taaggaccaa
     1501 gagttctcgc gtcacaccgt catgggcggc ggtacttgcc gtcatcgtgt cgtgcttctc
     1561 gcacagcgca agccgtgccg catcggtact gaggcacacg tacttcgcgg ggaacctcgg
     1621 aatcgcgggt ggacggacgc gagctgcggg gttctaccga gatgcacccg ttgccagtgc
     1681 cgatggcgcg cacgggcggg tgtcgtagcg tcgcgtgctc cgactactcc acgaggaggt
     1741 gcgtatggca cgcacgatca cgcggtggga gccgttcgcc gagctggccg acatgcgcca
     1801 gcgcttcgac cggctgctcg gtgagctcgg cgacggggag cgcgagtgga tgcccgcgat
     1861 cgacatggtc cgcgacgacg gagacctcgt cgtgcgggcc gaggtgccgg gcatcaagcc
     1921 cgaggagatc gagatcaagg cagaggaagg cacgctgacg atctccggca agcacgaaga
     1981 ggccaaggag gagaagggca agcacttcgt ccgccgtgag cgccgctacg gcgcgttctc
     2041 gcgcacgatg gcgctgccgg acggggtcga tccgaagaag atcagggcca gcacccacga
     2101 tggcc
//
LOCUS       DASSYW010000931         4581 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1409390, whole genome shotgun sequence.
ACCESSION   DASSYW010000931 DASSYW010000000
VERSION     DASSYW010000931.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4581)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4581)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4581
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1409390"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..234)
                     /locus_tag="VFN38_14700"
     CDS             complement(<1..234)
                     /locus_tag="VFN38_14700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013073.1"
                     /translation="MAAATVHPAAAGAQNRSEDEYTRYELLAPETSSFKIVYDVTAVS
                     PGARYFFNPIRIGSVATDESVVDLMTGAALDFSE"
     gene            complement(348..911)
                     /locus_tag="VFN38_14705"
     CDS             complement(348..911)
                     /locus_tag="VFN38_14705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013074.1"
                     /translation="MRRFLTVRLLLLAAILAGSPACLVLSLHPGYDDDTIAWDPQLVG
                     KWQDTDDKSSIVIERSEWRSYRIHYEHPIETGDLTAYLTIVGNDRYLDVMPARGQDRG
                     SFLVPVHALLRVRLDGNRLELAPLSFDWFSERLRAARLLPGLDVVADQKENALIVSPT
                     DRLRAWLRTQLPESEAFGAAATFTRQD"
     gene            complement(946..2217)
                     /locus_tag="VFN38_14710"
     CDS             complement(946..2217)
                     /locus_tag="VFN38_14710"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HET9013075.1"
                     /translation="MTTTHPAHPSPSSPAAGLFGWWREGTDDARRALVAAGLGWMLDA
                     FDVMLYGLLLPTIIADLDLTNRTAGAIGSVTLLAAAGGGLVFGVVADRYGRTRALMAS
                     VLIYSVFTAACGFAYSAMQLAIFRILLGIGMGGEWASGAALVSESWPAAHRGKALGLM
                     QSAWAIGYGLAALVTLLVLPRWGWRAVFFVGVLPALLTLWVRRYVREPELWVRSRGAN
                     RPRGRLSDVFGSGRGAVTVAVTLMNACTLFAWWGFNLWLPGFLSMPPASGGIGLSAQH
                     MSWFIIAMQVGMWFGYVTFGYIGDVVGRKRAYVAYLLAAALLIAIYTSVRAPVVLLLL
                     GPFVAFFATGFFSGFGAVTAEIYPTDVRATAQGLTYNLGRIASAAAPWTVGALAQTRG
                     FDVALSTTSVAFVLAAVLWFWIPETSGRRLA"
     gene            complement(2220..2984)
                     /locus_tag="VFN38_14715"
     CDS             complement(2220..2984)
                     /locus_tag="VFN38_14715"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: protein motif:HMM:NF003814.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_function: GO:0017168 - 5-oxoprolinase (ATP-hydrolyzing)
                     activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpA"
                     /protein_id="HET9013076.1"
                     /translation="MRIDLNSDLGESFGPWPMGQDAALMDSISSANVACGFHAGDPGA
                     MRATIALAREKGVAIGAHPGFQDLVGFGRREMKATPAEVEDLVLYQVSALAGMASAQG
                     VRLQHVKAHGALYNMAARDRSLAGAIARAVRSFDASLVLFGLPGSELLRAGEDAGLQV
                     ASEGFADRAYSPDGSLAPRNAPGAVIHEPEKVVERALAMVEAGRVVATDGTVLRFAVD
                     TLCVHGDTPGAAGLAAELRAGLAQRGVEVRPILRRL"
     gene            3058..4221
                     /locus_tag="VFN38_14720"
     CDS             3058..4221
                     /locus_tag="VFN38_14720"
                     /inference="COORDINATES: protein motif:HMM:NF015863.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY-associated TM helix domain-containing
                     protein"
                     /protein_id="HET9013077.1"
                     /translation="MKTFRSVLFWMHLAAGTAAGVVILIMSVTGVALTYEKQMLEWAD
                     RRAWTAPSSIAAQPLSPETLLARVIEAHPGTAPIGITLRADRMAPATLTLEGNKVLLA
                     DPFTGAIIGEPSPWLRSFFRTMTVWHRYLALEGTSRATGKALTGAANLIFLFIVVSGL
                     YLWVPRVWSWIQFTKVLWFRSGLPPKARDFNWHNVIGVWTAVPLAIVVLGALPISYPW
                     ASNLAYRIVGDTPPAPASAPVRSNDQVNVTYVSDGVDAAWTAAQSQVPSWRTMTTRLA
                     SSTNAPVVIAVDEGYGGQPQKRTTFTVNRASGTVMKAEAFQSLSAGRRLRTWLRFAHT
                     GEIYGLTGQTIAGLASAGGAVLVYTGLALALRRFVARIKRRRSAEAFEQQRAA"
     gene            4312..>4581
                     /locus_tag="VFN38_14725"
     CDS             4312..>4581
                     /locus_tag="VFN38_14725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013078.1"
                     /translation="MMRLMLSRSTTTRVLALFLFLAGPAWAQSPQRQTQEDDYTRYEL
                     LAPDTAQFRILYEVTATTAGAPFFFNAIRKGSIASDERVSDMMTGQ"
BASE COUNT          809 a         1577 c         1512 g          683 t
ORIGIN      
        1 ctccgaaaaa tcaagcgccg cgccagtcat caaatcgacg accgactcgt cggtcgcgac
       61 gctgccgatc ctgatcggat tgaagaagta cctggcgccc ggcgacaccg cggtcacgtc
      121 gtagacgatc ttgaacgacg acgtttccgg cgcgaggagc tcgtagcgcg tgtactcgtc
      181 ctcgctgcgg ttctgcgcac cagcggcggc cgggtgcacg gtcgctgccg ccatgcagaa
      241 gaggaacgtc cgtgccgcgc gcgctcgcat cattgctcaa cctcggctca acctcggctc
      301 aacctcggct cgacctcgac tcgacctcgt ccgtcccgcg gctgtgctca gtcctgtcgc
      361 gtgaacgtcg ccgccgctcc gaacgcctcg ctctccggca gctgcgtgcg cagccacgcg
      421 cgcaggcgat cggtcggcga gacgatgagc gcattctcct tctgatcggc gacgacgtcg
      481 agccccggga gcagcctggc ggcgcgcagc cgctcggaga accagtcgaa cgagagcggc
      541 gcgagctcca gccggtttcc gtcgagacgc acccgcagga gggcgtgcac ggggaccagg
      601 aacgagccgc gatcctgccc gcgtgcgggc atgacgtcaa gatatcggtc gttgccgacg
      661 atggtcagat aggcggtcag gtcgccggtc tcgatcggat gctcgtagtg aatgcggtac
      721 gagcgccact cgctccgctc gatcacgatc gacgacttgt cgtcggtatc ctgccatttg
      781 ccgacgagct gcggatccca ggcaatcgtg tcgtcgtcgt agccggggtg gagggacagc
      841 accaggcacg ccggcgatcc agccaggatt gccgcgagca gcagcaggcg gacggtcaga
      901 aatcggcgca tatctctttg gacaccgcac ccggcgacgg atacgtcagg caagcctgcg
      961 cccgctcgtc tccgggatcc agaaccacag cacggcggcg agcacgaacg cgaccgacgt
     1021 cgtcgacagc gcgacgtcga agccgcgcgt ctgcgcgagc gcgcccaccg tccagggcgc
     1081 cgcggcgctc gcaatcctgc cgaggttgta ggtgagtccc tgcgcggtag cgcggacatc
     1141 ggtcggatag atctccgcgg tcaccgcgcc gaacccgctg aagaagccgg tggcgaagaa
     1201 cgcgacgaac ggcccgagaa gcagcaggac gaccggtgcg cgcacggacg tgtagatcgc
     1261 gatcagcagc gccgcggcga gcaggtacgc gacatacgcg cgcttgcgtc cgaccacgtc
     1321 gccgatatag ccgaaggtca cgtagccgaa ccacatgccg acctgcatcg cgatgatgaa
     1381 ccacgacatg tgctgcgcgg aaaggccgat gccgccggac gcgggcggca tcgagagaaa
     1441 tcccggcagc cacagattga agccccacca cgcgaagagc gtgcacgcat tcatcagcgt
     1501 gaccgcgacg gtcaccgcgc cgcgcccgct cccgaagacg tcgctgagcc tgccgcgcgg
     1561 ccgattggca ccgcgcgagc gcacccagag ctcaggctcg cgcacgtatc gacggaccca
     1621 cagcgtgagc agcgccggca ggacgccgac gaagaacacc gcgcgccagc cccagcgcgg
     1681 caggacgagc agcgtcacca gcgccgccag cccgtagccg atcgcccacg cgctctgcat
     1741 cagcccgagc gccttgccgc ggtgcgcggc aggccagctc tcggacacca gcgccgcgcc
     1801 gctcgcccac tcgccgccca tgccgatgcc gagcaggatg cggaagatcg cgagctgcat
     1861 cgcggagtac gcaaaaccgc acgcggcggt gaagacggaa tagatgagaa cgctcgccat
     1921 caacgcgcgc gtccggccgt agcggtcggc gacgacgccg aagacgagtc cgccgccggc
     1981 ggcagcgagc agcgtcaccg atccgatcgc gccggccgtg cgattggtga gatcgaggtc
     2041 ggcgatgatc gtcggcagca gcaggccgta gagcatcaca tcgaacgcgt ccagcatcca
     2101 gccgaggccg gcggcgacga gggcgcgccg tgcatcgtcg gtgccctcgc gccaccagcc
     2161 gaagagcccc gccgccggtg acgatggcga cgggtgagca ggatgagtcg tcgtcatggt
     2221 tacagacgcc gcagaatcgg ccggacctcg acgccgcgct gcgcgagacc ggcacggagc
     2281 tcggcggcga gcccggccgc accgggcgtg tctccgtgca cgcacagcgt gtcgaccgcg
     2341 aacctgagca ccgttccgtc ggtggcgacg acgcgccccg cctcgaccat cgcgagcgcg
     2401 cgctcgacga ctttctcggg ttcgtggatg acggctccag gagcgttgcg cggcgccagc
     2461 gatccatccg gcgaatacgc gcgatccgcg aacccttcag aggcaacctg cagcccggcg
     2521 tcctcgccgg cgcgcaacag ctccgagccg ggaagcccga acaggaccag cgacgcgtcg
     2581 aacgagcgga ccgcccgtgc aatagcgccc gccagcgagc gatcgcgcgc cgccatgttg
     2641 tagagcgcgc cgtgcgcctt gacgtgctga agccgcacgc cttgtgccga cgccattccc
     2701 gcaagcgcgg agacttggta gagcaccagg tcctcgacct cggcaggcgt cgctttcatc
     2761 tcgcggcggc cgaagccgac caggtcctgg aagccggggt gggcgccgat cgccacgccc
     2821 ttctcgcggg cgagcgcgat cgtcgcccgc atcgcgcccg gatcgccggc gtggaagccg
     2881 cacgcgacgt tcgccgagga aatgctgtcc atcagcgcgg cgtcctggcc catgggccag
     2941 gggccgaaag actcgcctaa gtcggaattg agatcaattc tcattttgct cttgaccgac
     3001 cattttagtc ggcaataagc ttggtttgaa gttgagacca agtctcaaga tcgacgtatg
     3061 aagacatttc gttccgttct cttctggatg cacctcgcgg ccggtactgc ggccggggtc
     3121 gtcatcctca tcatgtcggt gaccggcgtt gcccttacct acgagaagca aatgctcgag
     3181 tgggcggatc gccgcgcctg gaccgcgcca tcctctatcg ctgcccagcc cctctcgccg
     3241 gagacgctgc tggcgagggt gatagaggcc catccgggga cggcgccgat cggaatcacc
     3301 ctgcgcgccg accgcatggc gcccgcgacg ctcacgctcg aaggcaacaa ggtgctgctc
     3361 gccgatccgt ttaccggggc catcatcggc gagccgtcgc catggcttcg atcgttcttc
     3421 cggacgatga ccgtgtggca tcgctacctg gcgctcgagg gaacgagccg tgccaccggc
     3481 aaagcactga ccggcgccgc caacctgatt ttcctgttca tcgttgtcag cggcctttac
     3541 ctgtgggtgc cgcgtgtctg gtcgtggatt cagttcacga aggtactctg gttccgatcg
     3601 ggacttccgc cgaaggcgcg cgacttcaac tggcacaacg tcatcggcgt gtggaccgcg
     3661 gttccccttg cgatcgttgt gctgggcgcg ctgccaatct cgtatccgtg ggcgagcaat
     3721 ctcgcgtatc gcatcgtcgg cgatacgccg cccgcgcctg cctcggcgcc ggtgcgttcg
     3781 aacgatcaag tgaacgtgac ctacgtcagc gacggagtcg acgcggcatg gaccgcggcg
     3841 caatcacaag tcccctcgtg gcggaccatg acgacccggc tcgcgtcgtc gaccaacgcg
     3901 ccggtggtga tcgcggttga tgaaggctac ggcggtcagc cgcagaagcg aacgacgttc
     3961 acggtgaatc gcgcgtcggg aacggtcatg aaggcggaag cctttcaaag cctgagcgcc
     4021 ggccgtcgat tgcgaacgtg gctgcgcttc gcccacaccg gtgagatcta cggattgacg
     4081 ggacagacga tcgccggtct ggcgtctgcc ggcggagccg tgctcgtcta cacgggcctg
     4141 gctctcgccc tgcgccggtt cgtcgctcgg atcaagcgtc gtcgtagcgc cgaggcattc
     4201 gagcagcaac gggcggcctg aagccccacc agggacggcg gcggcgaagg tggagctggc
     4261 ggcgacgagc cgatcggcgc ccgcgtcccg cggactgcgg cgcgacaggc tatgatgcgc
     4321 ctcatgcttt cccgaagcac gaccacaagg gtcctggccc tttttctgtt tctggcaggc
     4381 cccgcctggg cgcagagccc tcagcgacag acccaggaag acgattacac ccgctacgag
     4441 ctcctcgcac ctgataccgc gcagtttcgc atcctctacg aagtgacggc gacaacggcc
     4501 ggcgcaccgt tcttcttcaa cgcgatccgc aagggcagca tcgcgagcga tgagcgcgtg
     4561 tcggacatga tgacgggaca g
//
LOCUS       DASSYW010000932         2152 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_971447, whole genome shotgun sequence.
ACCESSION   DASSYW010000932 DASSYW010000000
VERSION     DASSYW010000932.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2152)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2152)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2152
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_971447"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..574)
                     /locus_tag="VFN38_14730"
     CDS             complement(<1..574)
                     /locus_tag="VFN38_14730"
                     /inference="COORDINATES: protein motif:HMM:TIGR01670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD hydrolase family protein"
                     /protein_id="HET9013079.1"
                     /translation="MRTTGQARAELVEARARRIRLILFDVDGVLTDGKVLLHADGSES
                     KQFDIKDGTAIVWAQRCGLTVGLLSARSSAATTQRATQLGIAHVHQGVASKLETFDRL
                     ITDLGVEAEDVAYMGDDVLDLPVLSRAGLAAAPSDAADDVRARVHWVSRARGGDGAAR
                     ELVERILRAQNKWDELLASYLDEGPAKAGRH"
     gene            complement(576..1553)
                     /locus_tag="VFN38_14735"
     CDS             complement(576..1553)
                     /locus_tag="VFN38_14735"
                     /inference="COORDINATES: protein motif:HMM:TIGR00393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KpsF/GutQ family sugar-phosphate isomerase"
                     /protein_id="HET9013080.1"
                     /translation="MADRALARKVLETEAAAIVSLVDRLDARFDAAVDTLRRCTGRVI
                     LTGMGKSGIICRKIAATLTSTGTPAFFLHPAEATHGDLGVIQGDDVVVALSYSGETDE
                     LLRLLETIRRVGAKLIAITGGSSSTLALAADVALDCSVTEEACPMNLVPTASTTAALA
                     IGDALAMCLLVEKGFREEDFASLHPGGKLGKRLMRVEVLMHSGDRCPIVKPDTLMRDV
                     IYEMNSKGLGMTCVVDGDAALLGIITDGDLRRHMERGGSILELRAADVMTRNPVAVPR
                     TTLAAQALHIMEQRKITSVVVADGSEPRRVAGVVHLHDLWRMDRIKEMF"
     gene            complement(1546..>2152)
                     /gene="kdsA"
                     /locus_tag="VFN38_14740"
     CDS             complement(1546..>2152)
                     /gene="kdsA"
                     /locus_tag="VFN38_14740"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: protein motif:HMM:NF003543.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008676 - 3-deoxy-8-phosphooctulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HET9013081.1"
                     /translation="SVPILTDIHEPAQARPAGDVADILQIPAFLSRQTDLIVAAAKTG
                     RIVNIKKGQFQAPDDMKHAIAKVVDAGNPRVTITERGTTFGYHNLVVDMRALPMLRAL
                     GVPVVFDVTHSLQLPGGGDGVTAGLAQYIEPLASAGVAAGVDAVFLEVHEEPARAKSD
                     AQNALRLDLLEPLLRRLTAIDAIVKHTQTQTAGSSEVNRRG"
BASE COUNT          317 a          748 c          729 g          358 t
ORIGIN      
        1 cgtggcgtcc ggctttagcc ggaccctcgt caagatacga cgccagcagc tcgtcccact
       61 tgttctgggc gcgcaggatc cgctccacca gctcgcgggc ggcgccgtcg ccgccacgcg
      121 cccggctcac ccagtgcacg cgggcgcgga cgtcgtcggc cgcatccgac ggcgcggcgg
      181 ccaggccggc acgtgacagc actgggagat cgagcacgtc atcacccatg taggccacgt
      241 cctcggcctc gacccccaga tcggtgatca ggcggtcgaa cgtctcgagc ttgctggcga
      301 cgccctgatg cacgtgcgca atcccaagct gcgtcgcccg ctgcgtcgtc gccgccgacg
      361 atcgcgccga caggagtccc acggtgagtc cgcagcgctg cgcccacacg atggcggttc
      421 catctttgat gtcgaactgc ttgctctcgc tgccgtcggc gtggagcagc accttgccgt
      481 cggtcagcac gccgtccacg tcgaagagga tcagccggat gcggcgggcg cgggcttcga
      541 ccagctcggc gcgtgcctgt cccgtggtcc gcacctcaga acatctcctt gatccggtcc
      601 atccgccaga ggtcgtggag gtgcacgacg ccggcgacgc gccgcggttc gctcccgtca
      661 gcaaccacga ccgaggtgat cttgcgctgc tccatgatgt gcagcgcctg cgccgcgagc
      721 gtggtgcgcg gcaccgccac cgggttgcgc gtcatcacgt cggcggccct caactcgagg
      781 attgagccgc cgcgctccat atgccggcgc aggtcgccgt ccgtgatgat cccgagcagc
      841 gccgcgtcgc cgtcgacgac gcaggtcatg ccgagccctt tgctgttcat ctcgtagatc
      901 acgtcgcgca tcagcgtgtc cggcttcacg atcgggcagc ggtcgcccga gtgcatgagt
      961 acctcgacgc gcatcaggcg cttgccgagt ttgccgcccg gatgcaggct ggcgaaatcc
     1021 tcctcgcgaa accccttttc gacgagcaga cacatcgcga gcgcgtcgcc gatggccagc
     1081 gccgccgtcg tgctcgcggt cggcaccagg ttcatcggac acgcctcttc ggtgacgctg
     1141 cagtcgaggg cgacgtcggc cgccagcgcc agcgtcgagg aggaaccgcc ggtgatcgca
     1201 atcagcttgg cgccgacgcg gcgaatggtc tcgagcagcc gcagcagttc gtcggtctcg
     1261 ccgctgtagg acagggcgac cacgacgtca tcgccctgaa tcaccccgag gtcgccgtgc
     1321 gtcgcttcgg ccggatgcag aaagaacgcg ggcgtcccgg tgctcgtgag cgtcgccgca
     1381 atcttgcggc agatgatgcc cgacttgccc atgccggtca ggatcacgcg ccccgtgcag
     1441 cgtcgcagcg tgtcgacggc cgcgtcgaag cgcgcgtcga gccgatcgac gagcgacacg
     1501 atcgcggcgg cttcggtttc caggactttc cttgccagag cgcgatcagc cacgccggtt
     1561 gacctcgctg ctcccggccg tctgcgtctg cgtgtgcttg acgatggcgt cgatcgcggt
     1621 cagacggcgg agcagcggtt cgagcaagtc gagccgcagc gcgttctgag cgtcgctctt
     1681 cgcccgcgcc ggctcctcat gcacttcgag aaagacagcg tccaccccgg cggccacgcc
     1741 ggccgacgcc agcggctcga tgtactgggc gaggccggcc gtcacgccgt ctccgccgcc
     1801 gggcaattgc aggctgtggg tgacgtcgaa cacgaccggc acgccaagcg cgcgcagcat
     1861 cggcagggcc cgcatgtcga cgacgaggtt gtggtagccg aaggtggtgc cgcgttcggt
     1921 gatggtgacg cgagggtttc cggcatcgac gactttcgcg atggcgtgtt tcatgtcgtc
     1981 gggcgcctgg aactgtcctt tcttgatgtt gacgatgcgg ccggtcttgg cggcggcgac
     2041 gatcagatcg gtctggcgcg acagaaacgc cggaatctgc aggatgtcgg cgacgtcacc
     2101 cgcgggccgc gcctgggccg gctcgtggat gtcggtcagg atcggaaccg ag
//
LOCUS       DASSYW010000933         4047 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_156609, whole genome shotgun sequence.
ACCESSION   DASSYW010000933 DASSYW010000000
VERSION     DASSYW010000933.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4047)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4047)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4047
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_156609"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(111..1016)
                     /locus_tag="VFN38_14745"
     CDS             complement(111..1016)
                     /locus_tag="VFN38_14745"
                     /inference="COORDINATES: protein motif:HMM:NF013718.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HET9013082.1"
                     /translation="MSISPTHPVRVPGARRTSASSLLAALALAGTLLGALPVGVAGAQ
                     PADTTRRSTRPLFTSRDAVAAGIFALGTIAAIPLDKVAARRLQNPRAQGNRFLRHQAT
                     NVRLVAEPGSLIIGGALYGAGRLSGNRRMADLGLHGTEAIGVGLGVVTVAKILAGRAR
                     PYVDVNDPGNFGFGRGLSHEEYRSFPSGHTVMAFSAAAAVTSETSRWWPQSRWYVGPV
                     MYGGASLVGLSRMYNNKHWASDVLVGAAVGTFAGLKTVRYHHSHPGNRIDKWLLSGAI
                     APAPSGGYALSLTILPGLGMRNEER"
     gene            1245..2504
                     /locus_tag="VFN38_14750"
     CDS             1245..2504
                     /locus_tag="VFN38_14750"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HET9013083.1"
                     /translation="MKRPGKHRVTRKQAGSRGGIGLALAGGGPLGAVYEIGAIRALDE
                     ALEGLDFETLDSYVGVSAGAFVAACLANGITPTQLVRMLFRHEPGEIPFTPETFFTPA
                     YGEIGRRAMMLPGLATGSLWKALRQPGPQGLGAGLAHLARALPVGYFDNEPIRRYVAA
                     LLGNNGRTDDFRQLGRRLTIVAADLEAGTPVLFGEEGWTDVPISRAVQASTAVPGLYL
                     PVNVDDRLCVDGALLKTMHASVPLAHGAGLVLCINPIVPVDTRSAVESGAMRRGELVH
                     RGLPAVLSQSVRMGLASRMDTGLASYALRYPDADVVLLEPAQDEYDLFFANVFSFRSR
                     EAIADLAYEATRRDLSRRRGELAPVLARHGVRLREEVLDDEERTLWTSVGLRAPRRAG
                     YGSATHRLGRTITRLEHTVRWRRSGAA"
     gene            2664..3083
                     /locus_tag="VFN38_14755"
     CDS             2664..3083
                     /locus_tag="VFN38_14755"
                     /inference="COORDINATES: protein motif:HMM:NF017415.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phasin family protein"
                     /protein_id="HET9013084.1"
                     /translation="MARTTRKQNAPMLRDSVEQIWLAGLGALAITEDEGSKLFKTLVK
                     RGEGFERTTKARLDEVVASARQVPSTAMNRIEETFDDTMTGVMHRIGVPTKREINGLA
                     RRVEGLAASIERQSAPPRRRARTKSGTTRRKASTPPS"
     gene            complement(3172..>4047)
                     /locus_tag="VFN38_14760"
     CDS             complement(3172..>4047)
                     /locus_tag="VFN38_14760"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HET9013085.1"
                     /translation="RPYGIPDFWRRGGGVDMTFDNFDRLLARGDRVLYFPEGVPGIGK
                     GFNHRYELQRFHTSFVRLAARHDTPVLPVHIVNGEWIHPFGYTIPWIDWVFQHVWLVP
                     FLPLPIGLLAIVMPLFWFFAFPAHLVFHVDEPIDVEGALREEGVTDYESPPRDRVRRA
                     AERVRVRMQRELKALVAVHGRTRYGFGSLLRALRRSRPHALHATPLGWPLAFLRHERD
                     RRRPPARSRLHALLRDWDLVGFYLPFGWPLLSLVRAFRKPPYGYRGLSREELAAVEGR
                     FLWKLAERPLPPRPA"
BASE COUNT          590 a         1438 c         1511 g          508 t
ORIGIN      
        1 aggggccggg tgtgaggagc tctggatttg tcgggagcga tccgtgtgaa tcgcccttcg
       61 gagagatccg cgcagatccg cgctgccgct tctcgccgag gcccgagcga ctacctctct
      121 tcgttccgca tgcctagccc aggcaatatc gtcagggaga gggcatagcc gccactcggc
      181 gccggcgcga tggcgccgga aaggagccat ttgtcgatcc ggttgcccgg gtgcgagtgg
      241 tggtagcgca cggtcttgag gccggcgaag gtgccgaccg ccgcccccac gaggacgtcg
      301 ctcgcccagt gcttgttgtt gtacatccgc gagaggccga cgagcgacgc cccgccgtac
      361 atcaccggtc cgacgtacca gcgcgactgc ggccaccagc gcgacgtctc ggaggtcacc
      421 gccgcggccg ccgagaaggc catcacggtg tgccccgagg gaaaggagcg gtactcctcg
      481 tgtgacagcc cgcgcccgaa gccgaagttt ccgggatcgt tcacgtccac gtagggacgg
      541 gcgcggccgg cgaggatctt cgccacggtg acgacgccga ggccgacgcc gatcgcctcg
      601 gtgccgtgga gcccgagatc ggccatccgc cggttgccgc tcagccgccc cgcgccgtac
      661 agcgccccgc cgatgatgag cgagcccggc tcggcgacca gccggacgtt cgtcgcctgg
      721 tggcggagga agcggttccc ctgggcgcgc gggttctgca gccgccgcgc ggcgaccttg
      781 tcgaggggga tcgcggcgat cgtcccgagc gcgaagatgc ccgcggcgac ggcgtcccgc
      841 gaggtgaaga gcgggcgcgt cgagcggcgg gtggtgtcgg ccggctgcgc gccggcgacg
      901 ccgaccggca gcgccccgag aagggtgccg gcgagggcga gcgcggcgag cagcgacgag
      961 gcgctggtgc ggcgtgcgcc ggggacgcga acgggatggg tcgggctgat cgacacgacg
     1021 ctggagctcg gggaatgtga ggggcggacc ggcgatgcgg cggcgctcac ccgtgcagcg
     1081 ctcgtgccgc tcgcccgagc ccggctcgca gcgagagccg atcggacaaa gtggccgaca
     1141 tcctgctcta gaggtatgct agcgggcgcc gcggccgccg ccgaaccttc gcttcggcgg
     1201 cgcctgcccg cattccgctg ctctctaagg agtaccgcaa caagatgaag cgacccggga
     1261 agcaccgagt cacgaggaag caggcaggct cgcggggagg gatcggtctc gccctcgccg
     1321 gcggcgggcc cctcggcgcg gtctacgaga tcggcgccat ccgcgcgctc gacgaggcgc
     1381 tcgaaggcct cgacttcgag acgctcgaca gctacgtcgg cgtcagcgcc ggcgccttcg
     1441 tcgccgcgtg tctcgccaac ggcatcaccc cgacgcagct cgtccgcatg ctgttccggc
     1501 acgagccggg cgagatcccg ttcacgccgg agaccttctt cacgccggcc tacggcgaga
     1561 tcgggcgccg ggccatgatg ctcccggggc tggcgaccgg ctcgctctgg aaggcgctcc
     1621 gccagcccgg cccgcagggc ctcggggccg gcctggcgca cctcgcccgc gccctcccgg
     1681 tgggctactt cgacaacgag ccgattcgcc gctacgtcgc cgcgctgctc ggcaacaacg
     1741 ggcggaccga cgacttccgg cagctgggac ggcggctcac catcgtcgcc gccgacctcg
     1801 aggccggcac gccggtgctg ttcggcgagg aggggtggac cgacgtcccg atctcgcgcg
     1861 ccgtgcaggc cagcaccgcc gtgcccggcc tctacctgcc ggtgaacgtg gacgatcgcc
     1921 tctgcgtgga cggcgcgctg ctcaagacga tgcacgcctc ggtgccgctc gcccacgggg
     1981 ccggcctcgt gctctgcatc aacccgatcg ttcccgtgga cacgcgctcg gcggtcgagt
     2041 cgggggcgat gcggcgcggg gagctcgtcc accgcggcct gccggcggtc ctctcgcagt
     2101 cggtgcggat gggactcgcc tcgcgcatgg acaccgggct cgccagctac gcgttgcgct
     2161 accccgacgc cgacgtcgtg ctgctcgagc cggcgcagga cgagtacgac ctcttcttcg
     2221 ccaacgtctt cagcttccgc tcgcgcgagg cgatcgccga cctcgcctac gaggcgacgc
     2281 gtcgcgacct ctcgcggcgg cgcggcgagc tggccccggt gctcgcgcgc cacggcgtgc
     2341 ggctgcgcga ggaggtgctc gacgacgagg agcgcacgct ctggacgagc gtcggactgc
     2401 gggcgccgcg gcgcgccggc tacggctcgg cgacccatcg cctcggccgc accatcacgc
     2461 gcctcgagca cacggtgcgg tggcgccgct ccggcgccgc ctgacgcgcg ccggcacgag
     2521 cgccgcgccc gggcgggcgg ggtccggcgc cccctccgcc gccgtggcgt ttgcctgaca
     2581 gaccgtgtct cgcgggagtc gcatcgtacg gtgcaggtgg tcgaccgatc accctcacgc
     2641 tacgacccgc acggaggtgt tccatggcac ggacgaccag aaagcagaac gcgccgatgc
     2701 tgcgcgactc ggtcgagcag atctggctcg ccgggctcgg tgcgctcgcg atcaccgagg
     2761 acgaagggag caagctgttc aagacgctcg tcaagcgcgg cgagggcttc gagcggacga
     2821 cgaaggcgcg cctcgacgag gtggtcgcct cggcccggca ggtgccgagc accgcgatga
     2881 accgcatcga ggagacgttc gacgacacga tgacgggcgt catgcaccgc atcggcgtgc
     2941 ccacgaagcg cgagatcaac ggcctggcgc gccgggtcga gggactcgcg gcgagcatcg
     3001 agcggcagtc ggcgccaccg cggcgccggg cgaggacgaa gtccggcacg acgcggcgga
     3061 aggcctccac gccgccgtcg tgagctgacg ggcgcggcgc gacgtcgcgc gccggtcggc
     3121 ggcgggaccg cttctcacga gaggcggtcc cgccgtcgcg ttgcgaccct gtcaggccgg
     3181 ccgcggaggg agcggccgct cggccagctt ccagaggaag cgcccctcga cggcggcgag
     3241 ctcctcgcgc gacagcccgc ggtagccgta cggcggcttg cggaaggcgc gcacgagcga
     3301 gagcagcggc cagccgaagg ggaggtagaa gccgaccagg tcccagtcgc ggaggagggc
     3361 gtggagacgg ctccgcgccg gcgggcggcg gcggtcgcgc tcgtgccgga ggaaggccag
     3421 cggccagccg agcggcgtgg cgtgcagcgc gtgcggccgg ctgcggcgca gcgcgcgcag
     3481 cagcgagccg aagccgtagc gcgtgcgccc gtgcacggcg accagcgcct tcagctcgcg
     3541 ctgcatccgc acgcgcacgc gctcggcggc gcggcgcacg cggtcgcgcg gcggcgactc
     3601 gtagtcggtc accccttcct cgcgcagcgc accctcgacg tcgatcggct cgtcgacgtg
     3661 gaagacgaga tgcgccggaa aggcgaagaa ccagaacaac ggcatcacga tcgcgagcag
     3721 tccgatcggc agcggcagga agggcacgag ccacacgtgc tggaacaccc agtcgatcca
     3781 cgggatcgtg tagccgaacg gatggatcca ttcgccgttc acgatgtgca ccggcagcac
     3841 cggcgtatcg tgccgcgcgg cgagccgcac gaagctcgtg tggaagcgct ggagctcgta
     3901 gcggtggttg aatcccttgc cgatccccgg caccccctcg gggaagtaga ggacacggtc
     3961 cccgcgggcg agcaggcggt cgaagttgtc gaacgtcatg tccacgccgc cgccgcgacg
     4021 ccagaagtcg gggatgccgt acggccg
//
LOCUS       DASSYW010000934         3294 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_823990, whole genome shotgun sequence.
ACCESSION   DASSYW010000934 DASSYW010000000
VERSION     DASSYW010000934.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3294)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3294)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3294
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_823990"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            33..179
                     /locus_tag="VFN38_14765"
                     /pseudo
     CDS             33..179
                     /locus_tag="VFN38_14765"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
     gene            complement(372..1466)
                     /locus_tag="VFN38_14770"
     CDS             complement(372..1466)
                     /locus_tag="VFN38_14770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013086.1"
                     /translation="MSSSAQRAALEALHAARPLVARLGETRSSEDVAADLIEAWTAVE
                     TGLRSLIGGSALAGQMLIRELRQRHFLSLEQANALAEFHAARERAARMDYQPTESDIN
                     AARHAFLKLEAGLMGATPPSSFAPGGVAAAGAAHAATVPLDALPARSTPLASAAPLPV
                     PVQRSGRRGWVVPLLVLLGLVAVGGVAWYTLAGRSGSDAYDQGVVAYREGRREAAAGS
                     FIKATKDAPADPMPHVYLARMAREAGRLQTAQEEAVKAVSLGPTNALALRELASVSFA
                     QQNYDGARRFYIRALQADANDKLSQGYLGCSLIRLGRVAEGMNWIQRAGSGSWSSCAP
                     APGAVPGAPAVIPQAGQQYPPGYQPAPVSP"
     gene            complement(1463..2623)
                     /locus_tag="VFN38_14775"
     CDS             complement(1463..2623)
                     /locus_tag="VFN38_14775"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HET9013087.1"
                     /translation="MATPFLSSEEYDERAHQLYNEGQYDDALVVLREGLVLYPNSVEL
                     HIGVGYARLAREEYAWARRSFEEALVLEPEHEDALAGLGETLLKFGLEEAGLRCFRRT
                     LELGYADDLDLMLQIGRALFREASSRDRRELFAGALEFFEVAVQQAPESAEAIACVGY
                     AQHRLGDDEAAVGSLRRSLQADNEHMEARIYLANIFYDRGDYDASLYHFERTTPQDHW
                     DELGIWRLIELKRSAHKLAEHAPELKPWEERLTELGGEMDDIDELFLEVDGTLSGDGG
                     EVEVARGQLELFGTLLTSLVEHRVDEEPDLELDTHTVLTKDGRRLSGSWEEIVRSLRD
                     GDVEGLQDRTTNEFMARVSKRAFRETGVRVPHHDAELFVRASADAGLLRIVR"
     gene            complement(2741..>3294)
                     /locus_tag="VFN38_14780"
     CDS             complement(2741..>3294)
                     /locus_tag="VFN38_14780"
                     /inference="COORDINATES: protein motif:HMM:NF016142.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004730 - pseudouridylate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0016798 - hydrolase activity, acting on
                     glycosyl bonds [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="pseudouridine-5'-phosphate glycosidase"
                     /protein_id="HET9013088.1"
                     /translation="ATGGIGGVHRDAPYDESGDLSELARTPMVVVCAGAKSILDLPAT
                     LERLETLGVTVVGYRTDEMPGFFTRTTGLRLAARADTPGELARIHLASRALKRTQATL
                     VVQAPPADVALPRELVDDAVAGALAEARRSGVVGAAVTPFLLAAVERATDGRSLRANL
                     GLLEENAALAGAIAVALARGEPS"
BASE COUNT          451 a         1197 c         1153 g          493 t
ORIGIN      
        1 aaatcgtcgc gctcagcgac ttcacgctcg agctgcgcga aggtgaagtc ttcggtcttg
       61 cgggaccaaa tggtgccggc aagagcacgc tgatctccct gctgctcggc ttcctcggcc
      121 ccagcgcggg caccgtcagc atcgacgggc tggcgccgcg ccgcttcgtc gagcggcacg
      181 gggtgagcta cctgtcggag ctcgtcaaca ttccgccggg ctggcgcgtg gcggacgccc
      241 tccggcgcta cgcgatcctc gccggcgcgg atctcgaggg tgaaatccgc gagcgcatgg
      301 acctcgcgtc cccgccagct cgcgtatcgc ttgccgacct ggtcgaagac gatcatgcgg
      361 gatcgactgg gctacggcga gacgggcgct ggctggtacc ccggcggata ctgctgtccc
      421 gcctgcggta tcaccgccgg cgcgccgggc accgcgcccg gggccggggc gcagctcgac
      481 caggagccgc ttcccgcgcg ctggatccag ttcatcccct cggccacgcg ccccagccgg
      541 atgagggagc agccgaggta gccctgcgac agcttgtcgt tcgcgtcggc ctggagggca
      601 cggatgtaga agcgccgcgc cccgtcgtag ttctgctgcg cgaacgacac ggaggcgagc
      661 tcccgcagcg cgagcgcgtt ggtgggtccg agcgacaccg ccttcaccgc ctcctcctgc
      721 gccgtctgca gccttcccgc ttcgcgcgcc atgcgcgcca ggtagacgtg cggcatcgga
      781 tcggccggcg cgtccttcgt cgccttgatg aacgagccgg cggccgcctc gcgtcgtccc
      841 tcgcggtagg cgacgactcc ctggtcgtag gcgtcgctcc ccgaccggcc ggccaaggtg
      901 taccaggcga cgccaccgac ggcgacgagc cccaggagca cgagcagggg caccacccat
      961 ccgcgacgcc cgctgcgctg cacgggcacg gggaggggcg ctgcactcgc cagcggcgtg
     1021 ctcctcgccg gcagggcgtc cagcggtacg gtagccgcgt gggccgcccc cgcggcggcc
     1081 acgccaccgg gcgcgaagct gctggggggc gtcgcgccca tcaggccggc ctcgagcttg
     1141 aggaaggcat gacgcgccgc gttgatgtcg gactcggttg gctggtagtc catgcgcgcc
     1201 gcgcgctcgc gcgccgcgtg gaactcggcc agcgcgttcg cctgctccag cgacaggaag
     1261 tgccgctgcc gcagctcgcg gatgagcatc tggcccgcga gcgccgagcc tccgatcagg
     1321 gagcggaggc cggtctcgac ggcggtccat gcctcgatca ggtccgccgc gacgtcctcg
     1381 ctgctgcgcg tctcgccgag cctcgcgacg aggggacgcg ctgcatgcag agcttccagc
     1441 gcggcccgct gcgcgctgct gctcatcgca cgatgcgcag cagtcccgcg tccgcactgg
     1501 cgcggacgaa cagctcggca tcgtggtgcg gcactcgtac ccccgtttcg cggaatgcgc
     1561 gcttcgagac gcgcgccatg aactcgttcg tcgtgcgatc ctgcagccct tccacgtccc
     1621 cgtcgcgcag cgagcggacg atctcctccc acgacccgga gaggcggcgg ccgtccttcg
     1681 tgagcaccgt atgcgtgtcg agctccaggt cgggctcttc gtccacccgg tgctccacga
     1741 gcgaggtgag gagggtgccg aacagctcga gctggccgcg ggcgacctcc acctctcccc
     1801 cgtcgccgga gagcgtgccg tccacctcga ggaacagctc gtcgatgtcg tccatctccc
     1861 cgccgagctc cgtgaggcgt tcctcccacg gcttcagctc gggggcgtgc tcggcaagct
     1921 tgtgcgcaga ccgcttcaac tcgatcagcc gccagatccc cagctcgtcc cagtgatcct
     1981 ggggagtcgt gcgctcgaag tggtacagcg acgcgtcgta gtcgccgcga tcgtagaaga
     2041 tgttcgccag gtagatgcgt gcttccatgt gctcgttgtc cgcctggagc gagcggcgca
     2101 gcgagcccac cgcggcctcg tcgtcgccca gccggtgctg ggcgtagccc acgcaggcga
     2161 tcgcctccgc gctctcgggg gcctgctgca ccgcgacctc gaagaactcc agggcgccgg
     2221 cgaacagctc gcggcgatcg cgcgacgacg cttcgcggaa gagggcgcgg ccgatctgga
     2281 gcatgaggtc caggtcgtcc gcgtacccga gctcgagcgt gcgccggaag cagcggagcc
     2341 ccgcctcctc gagtccgaac ttcagcagcg tctccccgag gccggccagc gcgtcctcgt
     2401 gctccggctc caggacgagc gcctcctcga agctgcgccg cgcccaggcg tactcctcgc
     2461 gcgccagacg ggcatacccc acaccgatgt gcagctccac cgagttcggg tagagcacga
     2521 gcccttcacg cagcacgacg agcgcgtcgt cgtactgccc ttcgttgtac agctgatggg
     2581 cgcgctcgtc gtactcttcg gagctcagga acggagtggc catgtctagc agagcctcca
     2641 gctcgagagg gttgcactat tgtaccattc ggtgcccgac aagttcaacg gcttgacagt
     2701 gctccggcga ggaagtgcag ggggcgggcc gtcgttcgcg tcacgagggt tcgccccgcg
     2761 ccagcgccac cgcgatcgcg cccgccagcg cggcgttctc ctccagcaat ccgaggttgg
     2821 cccgcagcga gcggccgtcg gtggcgcgct ccaccgcggc gagcaggaat ggagtgacag
     2881 ccgcgcccac gacgccgctg cgcctcgcct cggccagcgc gccggcgacg gcgtcgtcga
     2941 ccagctcccg cggcagcgcg acgtccgcgg ggggcgcttg tacgacgagc gtggcctgcg
     3001 ttcgttttag ggcgcgcgac gcgaggtgga tcctggccag ctcccccggc gtgtcggcgc
     3061 gcgcggcgag ccgcagcccc gtggtgcggg tgaagaagcc cggcatctcg tcggtccggt
     3121 acccgaccac ggtcacgccc agcgtctcga ggcgctcgag ggtggcgggc aggtcgagga
     3181 tggacttggc tccggcgcag acgaccacca tcggggtgcg ggcgagctcg gagaggtcgc
     3241 cggattcgtc gtaaggtgcg tctcgatgga cgccgccgat gccgccggtc gcga
//
LOCUS       DASSYW010000935         2632 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1243605, whole genome shotgun sequence.
ACCESSION   DASSYW010000935 DASSYW010000000
VERSION     DASSYW010000935.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2632)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2632)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2632
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1243605"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1146
                     /gene="ligA"
                     /locus_tag="VFN38_14785"
     CDS             <1..1146
                     /gene="ligA"
                     /locus_tag="VFN38_14785"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF005932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003911 - DNA ligase (NAD+) activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HET9013089.1"
                     /translation="AKFPRWATAFKFPAQQAHTKLLRIDVNVGRTGANTPYAVLEPVF
                     LAGSTISMATLHNADDIARKDIREGDTVIIEKAGDVIPRVVGPVLSLRPPESVPWQMP
                     DTCPLCQTHLHREEDEAVWRCENTSCPSKLQRGLEHFASRGAMNIEGLGESLIAQLLD
                     NGLVKNYADVYHLTLDNIATLTATSTRQDGKEIVRRFGEKNAAKVIEQIDRSRQAGLA
                     RVLYGLGIRHVGERGAQVLARAFGSVSAIAQAPVAQLEQTHEIGPVLAESVRTWFDEP
                     ANQDLIARLQQAGVRLEVTEEERAKASASGILTGKTYVLTGTLATMTREEATEAIERL
                     GGKVAGSVSKKTAAVVVGADPGSKADKAQALGIPVLDEEAFRQLVAG"
     gene            1167..>2632
                     /locus_tag="VFN38_14790"
     CDS             1167..>2632
                     /locus_tag="VFN38_14790"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HET9013090.1"
                     /translation="MPSHLTSRFAAITIGLAMAVGAMIGLVLAGNLTPQHAESEPRTG
                     RVTPTPTVKAVAPPGSASFADIAEQLNPAVVTIDASARGTRYRRPGGGTAPDPTQDGL
                     GRGGERDRDGPRRGAGTGFLVDAQGFILTNHHVVDGAERIVVRLSDSRSLRARLVGSD
                     PDTDIALIKIDSPTPLPYAKLGDSDTLRVGEWVVAIGNPLAYEHTVTVGVVSFIGRKL
                     FDSSFDRYIQTDAAINLGNSGGPLINARGEVVGINAAVSSRATSIGFAVPINQAITIL
                     PQLREDGRVTRGYIGVKLRTVDADLQRSLRLSSAAGALVQDVAIGSPGERAGLRPYDV
                     ITSVDGTSVSGDDDLISTVARMRPGTSATLTLVRDGRVVTLPVKLAERPQRERASTPD
                     APVPSGSRGPLLGLSVRPLDAEFAARYHVPDSVRGVVVWRVDAVSPALDADIERGDVI
                     LEIDRRPIRTVDEYDRAVANVRPGDVLAVYIYKPSVDER"
BASE COUNT          413 a          923 c          935 g          361 t
ORIGIN      
        1 gcgaagttcc cgcgctgggc gacggctttc aagtttcccg cgcagcaggc gcacacgaag
       61 ctgctgcgca tcgacgtcaa cgtcgggcgc acgggcgcga acacgccgta cgccgtcctc
      121 gagccggtgt tcctggcggg ctcgacgatc tcgatggcga cgctgcacaa cgccgacgac
      181 atcgcccgca aggacatccg cgaaggcgac acggtgatca tcgagaaggc gggcgacgtg
      241 attccgcgcg tggtgggacc ggtgctcagc ctgcggccgc ccgagtcggt gccgtggcag
      301 atgccggaca cctgcccgct gtgccagacg cacctgcacc gcgaggaaga cgaagccgtg
      361 tggcgctgcg agaacacgtc gtgcccgtcg aagctgcagc gcggtctcga gcacttcgcc
      421 tcgcgcggcg ccatgaacat cgaagggctg ggcgagtcgc tcatcgcgca gctgctcgac
      481 aacggcctgg tcaagaacta cgccgacgtc tatcacctga cgctcgacaa catcgccacc
      541 ttgacggcca cctccacccg ccaggacggc aaggagatcg tgcggcgatt cggcgagaag
      601 aacgccgcca aggtgatcga gcagatcgac cgcagccggc aggccgggct ggcgcgcgtg
      661 ctctacgggc tcggcatccg ccatgtcggt gagcgtggcg cgcaggtgct ggcgcgcgcg
      721 ttcggctcgg tgagtgccat cgcgcaggcc ccggtcgccc agctcgagca gacgcacgag
      781 atcggccccg tgctcgccga gtcggtgcgc acctggttcg acgaacccgc caaccaggat
      841 ctgattgcgc ggctgcagca ggccggcgtg cgcctggagg tcaccgagga agaacgggcc
      901 aaggcctcgg cgtcgggcat cctgacgggc aagacctacg tgctgacggg aacgctggcg
      961 actatgacgc gcgaggaggc caccgaggcg atcgagcgcc tgggaggcaa ggtggccggg
     1021 tcggtgagca agaagaccgc ggccgtggtg gtgggcgccg atcctggcag caaggccgac
     1081 aaagcccagg cgcttggcat cccggtcctg gacgaagagg cgttccggca gctggttgcg
     1141 ggataatggg cgtcgcgcat ttcacgatgc cttcacacct gaccagccgg ttcgccgcca
     1201 tcaccatcgg cctcgccatg gcggtgggcg cgatgatcgg cctcgtactc gccggcaacc
     1261 tcacgcccca gcacgccgag tcggaaccgc gaacggggcg cgtcacgccg acgccgaccg
     1321 tgaaggccgt cgcgccgccc ggctccgcgt cgtttgccga catcgccgag cagctcaacc
     1381 cggccgtcgt gacaatcgac gcctcggcgc gcggcacgcg ctatcggcgc cccgggggcg
     1441 gcaccgcgcc cgatccgacg caggacgggc tgggccgtgg gggcgagcgc gaccgggacg
     1501 gcccgcgccg cggcgccggc accggcttcc tggtggacgc ccagggcttc atcctgacca
     1561 accatcacgt ggtggacggc gccgagcgca tcgtcgtccg tctctccgac agccgctctc
     1621 tgcgggcccg actggtgggc tcggacccgg acaccgacat cgcgctgatc aagatcgatt
     1681 cgccgacgcc gctgccgtat gccaagttgg gcgattcgga cacgctgcgg gtgggcgagt
     1741 gggtggtcgc catcggcaac ccgctggcct acgagcacac ggtcaccgtc ggcgtcgtga
     1801 gcttcatcgg ccggaaactg ttcgactcgt cgttcgaccg ctacatccag actgacgccg
     1861 ccatcaacct ggggaacagc ggcggcccgc tgatcaacgc acgcggcgaa gtggtgggga
     1921 tcaacgcggc ggtgagctcg cgggccacga gcatcggctt cgcggtgccg atcaaccagg
     1981 ccatcaccat cctgccgcag ctgcgcgagg acggccgtgt gacccgcggc tacatcggcg
     2041 tgaagctgcg cacggtggac gccgacctgc agcgctcgct gcggctgtcg tcggcggccg
     2101 gcgcgctcgt gcaggacgtc gccatcggat cgccgggcga acgcgccggg ctgcgcccct
     2161 acgacgtgat cacgtcggtg gacggcacga gcgtgtcggg cgatgacgac ctcatttcca
     2221 ccgtggcgcg catgcgtccg ggcacgtcgg ccacgctgac gctggtgcgc gacggccgcg
     2281 tggtgacgct gccggtcaag cttgccgagc ggccgcagcg cgaacgcgcc tccaccccag
     2341 acgcgcccgt gccgtccggc tcgcgcgggc cgctgctcgg cctgtcggtg cgcccgctcg
     2401 acgccgagtt cgcggcgcgc tatcacgtgc ccgacagcgt gcgcggcgtc gtggtgtggc
     2461 gcgtggacgc cgtgagcccg gcgctcgacg ccgacatcga gcgcggcgac gtgatcctcg
     2521 aaatcgatcg ccggccgatc cgcacggtgg acgaatacga ccgcgcggtg gccaacgtcc
     2581 gtccgggcga cgtgctggct gtgtacatct acaagccgag cgtcgacgaa cg
//
LOCUS       DASSYW010000936         3551 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_758729, whole genome shotgun sequence.
ACCESSION   DASSYW010000936 DASSYW010000000
VERSION     DASSYW010000936.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3551)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3551)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3551
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_758729"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..315)
                     /locus_tag="VFN38_14795"
     CDS             complement(<1..315)
                     /locus_tag="VFN38_14795"
                     /inference="COORDINATES: protein motif:HMM:NF012753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HET9013091.1"
                     /translation="MKLIVAIIRPDRLNDVLERLYRAEVRGLTVSRVLGHGGEMVKVE
                     TYRGATVKMELHEKVRLEIGVSEPFVDLTVAAIIESAGTGEVGDGKVFVLPVHQVHRI
                     RTG"
     gene            complement(326..1576)
                     /locus_tag="VFN38_14800"
     CDS             complement(326..1576)
                     /locus_tag="VFN38_14800"
                     /inference="COORDINATES: protein motif:HMM:TIGR00836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008519 - ammonium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0072488 - ammonium transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter"
                     /protein_id="HET9013092.1"
                     /translation="MMVATALVLLMVPAVALFYGGLVRAKSALNTMMMCLAAVGAVGV
                     AWALAGYSIAFAPGGALAGGLEHLALRGVGLEARGSIPHLLFMAYQASFAVVTAVLIA
                     GAVVERMRFAPYLAFVALWTLGVYAPIAHWVWGGGWLAQLGVLDYAGGTVVHVNAGVA
                     ALVAALVVGGRKDYGRQAMLPHNVPLVLLGSSLLYFGWFGFNGGSALAADRSAVVAFV
                     NTMLAPMASVLVWMLLDGLRTGRATAVGAATGIVVGLVAITPAAGFVAPLGALGIGAL
                     AAPPSYFAIVWRARTRVDDSLDVFAGHGVGGVVGALLTGVLADPAWGAGRGLLHGNPA
                     QLGLQALGVAAALLYSGAATFVLLRALGAVTRLQAAPRAQGVGMDVTQHGEEAYGSGE
                     GAVLLTSDHAPSAVGATALGEARA"
     gene            1780..2166
                     /locus_tag="VFN38_14805"
     CDS             1780..2166
                     /locus_tag="VFN38_14805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013093.1"
                     /translation="MEGQTNGATGQAAHDGAARDFGPAAERLTAAIGDLDRRYGWSKT
                     VKENPWPALAVAAGVGFALAETGLDRGARQATSEATSGVRSSAAGLVETLAAAATATV
                     SQAIHGQLEQLVNELKQAIGAPTTAR"
     gene            2281..3234
                     /gene="gnd"
                     /locus_tag="VFN38_14810"
     CDS             2281..3234
                     /gene="gnd"
                     /locus_tag="VFN38_14810"
                     /inference="COORDINATES: protein motif:HMM:TIGR00872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004616 - phosphogluconate dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="decarboxylating 6-phosphogluconate
                     dehydrogenase"
                     /protein_id="HET9013094.1"
                     /translation="MQIGMVGLGKMGANMTTRLLRGGHEVVVFDRSAESVAAAAKGGA
                     AAATSLADLVSRLASPRAVWVMVPAGDPTETTVQALAGLLSPGDAVIDGGNSNYKESI
                     RRAAALAERGLHFVDCGTSGGVWGLAEGYSMMVGGDEAAVERLRPIFETLAPGRNSGW
                     GRVGPSGSGHFVKMIHNGIEYGMMQAYAEGFSILEHKKEMSLDLAQIAEIWRNGSVVR
                     SWLLDLTARALVENPAMDGIAPYVSDSGEGRWTVAEAIDLDVPAPVITLSLIQRLRSR
                     DAESFADRLLSALRNQFGGHAVKRDVPGAAPAPSSATPAGR"
     gene            3237..>3551
                     /locus_tag="VFN38_14815"
     CDS             3237..>3551
                     /locus_tag="VFN38_14815"
                     /inference="COORDINATES: protein motif:HMM:NF012691.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013095.1"
                     /translation="MRHPIDASHAGHPDAEVPERPVEPNVFIIYGGTGDLAKRKVLPA
                     LYLLHAQNCTPAGCVVLGVSRDTGMDDAAFRKLATDAVLAAHPESAAAGVAEWAERFL
                     FFT"
BASE COUNT          534 a         1307 c         1280 g          430 t
ORIGIN      
        1 gccggtccgg atccggtgca cctggtgcac cggcaggacg aacaccttcc cgtcgccgac
       61 ctcgccggtg cccgcgctct cgatgatcgc cgcgacggtg aggtccacga atggctccga
      121 gacgccgatc tcgagccgca ccttctcgtg cagctccatc ttcacggtcg ccccgcgata
      181 ggtctccacc ttcaccatct ctccgccgtg gccgaggacg cgcgacaccg tgaggccgcg
      241 cacttcggcg cggtagagcc gctcgagcac gtcgttcaat cggtccggac ggatgatcgc
      301 gacgatcaat ttcacgctgg cgtcctcatg cgcgagcctc tccgagcgcc gtcgcgccca
      361 cggcgctcgg cgcgtgatcc gatgtcagca gcaccgcgcc ctcgccggag ccgtacgctt
      421 cctctccatg ctgcgtcacg tccattccca ccccctgcgc gcgcggcgcc gcctgcagcc
      481 gcgtcaccgc acccagggcg cgcagcagca cgaaggtggc cgcgccgctg tagagcaggg
      541 cggccgcgac accgagcgcc tgcaggccga gctgcgccgg gttgccgtgg agcagtccgc
      601 gcccggctcc ccaggccgga tcggcgagga cgccggtcag cagcgccccc acgaccccgc
      661 cgacgccgtg gccggcgaac acgtcgagcg agtcgtccac ccgcgtccgg gcccgccaga
      721 cgatggcgaa gtaactcggc ggcgcggcca gggcgccgat cccgagcgcg cccagtggag
      781 ccacgaagcc cgccgccggc gtgatcgcga cgaggccgac cacgatcccc gtcgccgcgc
      841 cgaccgcggt cgcccgcccc gtgcgcaacc cgtcgaggag catccacacg aggacgctgg
      901 ccatcggggc gagcatcgtg ttgacgaagg cgaccaccgc gctgcggtcg gcggccaggg
      961 cgctgccgcc gttgaagccg aaccagccga agtagagcag cgagctgccg agcagcacga
     1021 gcggaacgtt gtgcggcagc atcgcctggc ggccgtagtc cttccgcccg ccgacgacga
     1081 gcgccgcgac gagcgccgcc acgccggcgt tcacgtggac gacggtcccg ccggcgtagt
     1141 cgagcacgcc cagctgggcc agccatccgc ccccccacac ccagtgcgcg atcggcgcgt
     1201 acacgccgag cgtccagagg gcgacgaagg cgaggtaggg ggcgaagcgc atgcgctcga
     1261 ccacggcgcc ggcgatcagg accgccgtca ccaccgcgaa cgacgcctgg taggccatga
     1321 ataggaggtg cgggatcgag cccctcgcct ccagcccgac gccgcgcagg gcgaggtgct
     1381 ccaggccacc ggcgagcgcg ccccccggcg cgaaggcgat gctgtagccg gcgagggccc
     1441 acgcgacccc caccgccccg acggcggcca ggcacatcat catcgtgttg agcgcgctct
     1501 tggctcgaac gaggccgccg tagaagaggg cgacggcggg gaccatgagg aggacgagcg
     1561 cggtggcgac catcatccac gcggtgtccg cgggcgagat cgatcctacc gtcggcgcgg
     1621 cctggaaggc cgctcggatg gctggtacac tgggcagggg tacactccgg gaggagggcg
     1681 cggcaccgcc agcgagacaa gccccggcgg cgcgaccggg ttcccgcggc atgggctctg
     1741 ctcttctgct cgcgcccatc aacgagagga gcgaggcgca tggaaggcca gacgaatgga
     1801 gcgacgggac aggcggcgca cgacggcgcg gcgcgggatt tcgggccggc ggccgagcgt
     1861 ctgacggcgg ccatcggtga cctcgaccgc cgctacggct ggtcgaagac ggtgaaggag
     1921 aatccgtggc cggccctcgc ggtcgccgcc ggcgtcggct tcgcgctcgc cgagacgggg
     1981 ctcgaccgcg gtgcccgcca ggcaacgagc gaggcgacga gcggcgtgcg ctcgagtgcc
     2041 gcggggctcg tcgagacact cgccgcggcc gccacggcca cggtgagcca ggccattcac
     2101 ggccagctcg agcagctcgt caacgagctg aaacaggcga tcggcgcgcc gaccaccgcg
     2161 cgttaggcgg ccgcggcccg ccggaggcgg gccgccggtc gcaggagccg cgagcagcgg
     2221 gccgcgagag acgcggctcg ccgctcgccg ctgtcgtatt caccgggaga ccaggaccgc
     2281 atgcagatcg ggatggtagg gctcgggaag atgggcgcga acatgaccac ccgtctcctg
     2341 cgcgggggac acgaggtcgt cgtcttcgac cggagcgcgg agtcggtggc ggcggcggcg
     2401 aagggaggcg cggcggcggc cacctcgctc gccgacctcg tgagccggct cgcttcccca
     2461 cgcgcggtct gggtgatggt gccggccggc gatcccaccg agaccacggt gcaggcgctc
     2521 gccggcctgc tctcgcccgg cgacgccgtg atcgacggcg ggaacagcaa ctacaaggag
     2581 agcatccgcc gcgcggcggc gctcgccgag cgcggactgc acttcgtgga ttgcggcacc
     2641 agcggcggcg tctgggggct cgccgagggc tacagcatga tggtgggggg cgacgaggcc
     2701 gcggtcgagc ggttgcggcc gatcttcgag acgctcgcgc ccggcaggaa cagcggctgg
     2761 ggacgcgtcg gtccgagcgg cagcggccac ttcgtgaaga tgatccacaa cgggatcgaa
     2821 tacgggatga tgcaggccta cgccgagggc ttctcgatcc tcgagcacaa gaaggagatg
     2881 tcgctcgatc tcgctcagat cgccgagatc tggcgaaacg gcagcgtcgt gcgctcctgg
     2941 ctcctcgacc tcaccgcccg ggcgctggtc gagaatccgg cgatggacgg catcgcgccc
     3001 tacgtctccg actccggcga gggacggtgg acggtcgccg aggcgatcga cctcgacgtc
     3061 ccggcgccgg tgatcaccct ctccctcatc cagcgtctcc gctcgcgcga cgccgagtcg
     3121 ttcgccgacc gcctcctctc ggcgcttcgc aatcagttcg gcgggcacgc cgtgaagcgc
     3181 gacgtgccgg gcgccgcgcc ggcgccctcc tccgccactc cggcggggcg gtagcgatgc
     3241 ggcatccgat cgacgcgtcg cacgccggcc atcccgacgc cgaggtgccc gagcgcccgg
     3301 tggagcccaa cgtcttcatc atctacggcg gcacggggga tctcgcgaag cgcaaggtgc
     3361 tccccgcgct ctacctcctg cacgcccaga actgcacgcc cgccggttgc gtcgtcctcg
     3421 gggtcagccg cgacaccggg atggacgacg cggcgttccg gaagctggcg accgatgcgg
     3481 tcctcgccgc gcacccggag tcggcggccg ccggcgtcgc ggagtgggcg gagcgcttcc
     3541 tcttcttcac c
//
LOCUS       DASSYW010000937         2509 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1615, whole genome shotgun sequence.
ACCESSION   DASSYW010000937 DASSYW010000000
VERSION     DASSYW010000937.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2509)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2509)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2509
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1615"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(78..1568)
                     /locus_tag="VFN38_14820"
     CDS             complement(78..1568)
                     /locus_tag="VFN38_14820"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro aminopeptidase"
                     /protein_id="HET9013096.1"
                     /translation="MNRPPMFPSLSRRAAAHALALVASLVGAPAGAQISAAEFAARRD
                     SLAARIGSGVVVAFGGRTPVTDFGPFYQLPAFHYLTNLDEPDAAMVMVVQDGRAATTL
                     FLTPVDPRSAFYYGRRPDSATVVRTMGMSARAFSALAGVVDSLASTGARFYALGDFGD
                     ADFADEDSLTRGRQFMRTVASRHRGLEVKDAHEIVDQLRARKSPAEVALLRRAAEISS
                     EGHREAMRLAEPSREYELQAALEHGFMRLGGARPSYGSIVGGGVHGTQLHYMRDRGEV
                     KPGDVVVMDAATEYEGYAADITRTIPVSGKYTAEQRAIYELVLEAQKAAERNSKPGMS
                     AIAAQDSSIAIRARGLAALGLIESTSATFDPPWPVDCSRAPAQCRQSMFWMIHGISHG
                     IGLAVHDPAQFYRGDHTFQQGDAFTIEPGIYIGTSMLDQLPDTPRNRAFIAKVKPVVQ
                     RYENTGVRIEDDYVITEKGLERISNAPREIAEIEALMATRPPRALP"
     gene            1686..2423
                     /locus_tag="VFN38_14825"
     CDS             1686..2423
                     /locus_tag="VFN38_14825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013097.1"
                     /translation="MRLAHVLLAASLILPAPALLAQTSGDGYRFGVPDARFTLHAGYA
                     HAFAQSDVFDEAIRFLTLERSSFSAPDIGGDFSFTVAPRLDVSLTADYSAAVRESEDR
                     GYLDNNNLPIQQTTSFRRAPFMANVTLYLTPRGRSIGKLAWIPARVVPWVGAGGGATW
                     YRFMQEGDFVNYQTLNVFTAVLSSSGWASTAQASAGVDFTLTPNLALTLDARRYWASA
                     KPSDDYRTYDKIDLSGVTGALGLTLRL"
BASE COUNT          375 a          848 c          889 g          397 t
ORIGIN      
        1 ggccagcgca tccaccgggg tgagcacgag gcacagcagc gccgcgccga cgatgcgtcg
       61 cgcggcacgc gtcagcctca tggcagcgcc cgcggcggac gcgtggccat cagagcctcg
      121 atctcggcga tctcgcgcgg cgcgttgctg atgcgctcga gccccttctc ggtgatcacg
      181 tagtcgtcct cgatccggac gcccgtgttc tcgtagcgct gcacgaccgg cttcaccttc
      241 gcgatgaagg cgcggttgcg cggcgtgtcc ggaagctggt cgagcatcga ggtgccgatg
      301 tagatccccg gctcgatcgt gaaggcgtcg ccctgctgga aggtgtgatc gccacggtag
      361 aactgcgccg ggtcgtgcac ggcgagcccg atgccgtggc tgatcccgtg aatcatccag
      421 aacatcgact gccggcactg cgccggcgcc cgcgagcagt cgaccggcca ggggggatcg
      481 aaggtggcgc tcgtgctctc gatcaggccg agggccgcca gcccgcgcgc gcggatggcg
      541 atcgacgagt cctgggcggc gatcgcggac atgccgggct tcgagttgcg ctcggccgcc
      601 ttctgcgcct cgagcaccag ctcgtagatc gcgcgctgct cggcggtgta cttcccgctc
      661 accggaatgg tgcgcgtgat gtccgcggcg tagccctcgt actccgtggc ggcgtccatc
      721 accaccacgt cgcctggctt cacctcgccg cgatcgcgca tgtagtgcag ctgcgtgccg
      781 tgcaccccgc cgccgacgat ggacccgtac gacgggcgcg cgccgccgag acgcatgaag
      841 ccgtgctcga gcgcggcctg gagctcgtac tccctggacg gctccgcgag ccgcatcgcc
      901 tcgcgatgcc cctccgagct gatctcggcg gcacggcgaa gcagcgccac ttcggccggg
      961 ctcttccggg cgcgaagctg atcgacgatc tcgtgggcgt ccttcacctc gagcccgcga
     1021 tgacgcgacg cgaccgttcg catgaactgt cgtccgcggg tgagcgagtc ttcgtcggcg
     1081 aagtcggcgt cgccgaagtc cccgagcgcg tagaaccgtg caccggtgga ggcgagcgaa
     1141 tcgacgacgc cggcgagggc ggagaaggca cgcgccgaca tgcccatcgt gcgcaccacc
     1201 gtggccgagt ccggtcggcg gccgtagtag aaggcgctgc gcgggtcgac cggcgtgaga
     1261 aagagcgtcg tcgcggcgcg gccgtcctgc acgaccatca ccatcgccgc gtccggttcg
     1321 tcgaggttgg tgaggtagtg gaacgccggg agctggtaga aggggccgaa gtcggtgacc
     1381 ggcgtgcggc caccgaaggc gacgacgacg ccgctcccga tgcgggccgc gagggagtcc
     1441 cggcgcgcgg cgaattcggc ggcggagatc tgggcgccgg ccggcgcgcc gaccaggctg
     1501 gcgacgaggg caagggcgtg cgccgcggcg cgacgggaca gcgaggggaa cattggcggg
     1561 cggttcatgg taatgggcct ggttacggta gcctgagggc gggcgcaggg atagacacgg
     1621 atcaacggtg gacggccggc cgccgtacct gttgtatcca atcaattttg ggactattgt
     1681 atccaatgcg actcgcccac gtcctcctcg cggcgtccct gatcctcccc gccccggcgc
     1741 tcctcgccca gaccagcggc gacggttacc ggttcggcgt ccccgacgcc aggttcacgc
     1801 tccacgccgg ctacgcgcac gcgttcgccc agagcgacgt gttcgacgag gcgatccgat
     1861 tcctcacgct cgaacggagc tcgttcagcg cacccgacat cggcggcgac ttctccttca
     1921 ccgttgcgcc gaggctggac gtgtccctca cggccgacta ttcggccgcg gtgcgggaat
     1981 cggaggatcg cggctacctc gacaacaaca atctgccgat ccagcagacg acgagcttcc
     2041 ggcgcgcccc gttcatggcg aacgtcaccc tgtacctgac accgcgcggc cggtccatcg
     2101 gcaagcttgc gtggattccg gctcgcgtcg taccgtgggt cggggcgggc ggcggtgcca
     2161 cgtggtatcg cttcatgcag gaaggcgact tcgtgaacta ccagaccctg aacgtgttca
     2221 cggcggtgct ctcgtcgtcg ggctgggcgt ccacggcgca ggcgtcggcg ggcgtggatt
     2281 tcacgctcac gccgaatctc gcgttgacgc tcgacgcgcg tcgctactgg gcgagcgcga
     2341 agccgtccga cgactacagg acgtacgaca agatcgatct ctcgggcgtg accggtgcgc
     2401 tcggtctcac gctcaggctc taggcggatg aggttcacga ggatggagga ctccatgaag
     2461 cgcatcgtct cgatggtccg gtcgaccgcc gcggtggcgg cgttggtga
//
LOCUS       DASSYW010000938         2529 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1372909, whole genome shotgun sequence.
ACCESSION   DASSYW010000938 DASSYW010000000
VERSION     DASSYW010000938.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2529)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2529)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2529
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1372909"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            176..>2529
                     /locus_tag="VFN38_14830"
     CDS             176..>2529
                     /locus_tag="VFN38_14830"
                     /inference="COORDINATES: protein motif:HMM:TIGR02074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PBP1A family penicillin-binding protein"
                     /protein_id="HET9013098.1"
                     /translation="MAEDTGERPTGTRIVIRLATRAIVAALFLTAALAGTVGGVLFAY
                     GADLPEITALDDYRPNTITRIQASNGDVIGEFATERRVVIGYDDMAPVLRQAIMATED
                     ADFEQHFGLSFSRILMTAVKDVLTGQRAGASTITQQLARNLFLQSEYMRGGVYARSGR
                     EGLERKVKEALLALQIERRYTKREIFALYANQVPLHGAYGVEAGSRMYFNKSAKDLTL
                     DEAATIAAVIQTPARLSPFVNPERTLARRNNYVLPRMAEEGFVTRQAAEEAAKKPIVL
                     RGQATADERSFASYFVEDIRKNLEQRFGAAALYETGLQVQTTLDVDLQRAAERAVDRG
                     LRRLDKRRSGYRKTKLTVAAAKATPETYSSPRWRQPIAPGDVVPAVVMSLPKGAAGAP
                     RIRIAATELDLPKAGYAWTRKTNPADLFSVGDVIEVSVGPVVKGQYTQVTLEQAPIVE
                     GALVAIDNRTGQIRAMVGGFDFARSKFNRATQARRQVGSLFKPVLYSAAIDKGFTAET
                     VFIDEPVSYVAGPNQPPYRPLNYDRKYEGPVTLRHALEDSRNIPAVKALEAVGPDQVI
                     GYAKRLGLTGNYQPYLSLALGAAESTLLEMTSAYSAFPNQGVRMTPYAVRSVSDREGT
                     VIEENRPEPREALRADTAFLMAHLLEGVVQRGTAFAAKSLEWPLAGKTGTMDEFTDAW
                     FVGFDPNLTVGVWVGYDEKKPLGRGETGAQAALPIWMDVMRAYIEAHGDRNAPPTFEA
                     PGNIVFVNLDSGLPEAFIKGTQPAGLIPADQPAPPPVAAAPPAV"
BASE COUNT          437 a          903 c          827 g          362 t
ORIGIN      
        1 actaccgccc gcccggaggg cgggcaatta aacactgcac gtgggcgagg cttttcctcg
       61 ccacggttga agttcatttc attatcaaat ctgagtgctc tgcagtcaat gtcaggcgct
      121 gacggcaagg aagccgtccg cctaactgct tgaccctgag tcgtatactg ctcgtatggc
      181 ggaagacacg ggcgagcggc cgaccggcac cagaatcgtc atccggctgg ccacgcgggc
      241 gattgtggcc gcgctgttcc tcaccgccgc cttggccggg acggtgggcg gcgtgctgtt
      301 cgcctacggc gccgacctcc ccgagatcac cgcgctcgac gactaccgcc ccaacaccat
      361 cacccgcatc caagcgagca acggcgacgt catcggcgag ttcgccaccg agcgccgcgt
      421 cgtgatcggc tacgacgaca tggcgcccgt gctgcgccag gccatcatgg ccaccgagga
      481 cgccgacttc gagcagcact tcggcctgag cttctcgcgc atcctcatga ccgccgtgaa
      541 ggacgtgctc accggccagc gcgccggcgc cagcaccatc acgcagcagc tcgcccgcaa
      601 cctgtttctc cagtccgagt acatgcgcgg cggcgtctac gcccgcagcg ggcgcgaggg
      661 gctcgaacgg aaggtcaagg aagcgctgct cgcgctccag atcgaacggc gctataccaa
      721 gcgcgaaatc ttcgcgctct acgccaacca ggtgccgctg cacggcgcct acggcgtgga
      781 ggccggctcg cgcatgtact tcaacaagtc cgcgaaggac ctcacgctcg acgaagcggc
      841 taccatcgcg gccgtcatcc agacgcccgc gcgcctcagc ccgttcgtga acccggagcg
      901 cacgctggcg cggcgcaaca actacgtgct gccgcgcatg gccgaggaag ggttcgtcac
      961 ccggcaggcg gcggaagagg cggccaagaa gccgatcgtg ctgcgcggtc aggccaccgc
     1021 cgacgagcgg tcgttcgcct cgtacttcgt ggaagacatc cgcaagaacc tcgagcagcg
     1081 cttcggcgcc gcggcgctct acgaaaccgg cctgcaggtg cagaccacgc tcgacgtgga
     1141 cctgcagcgc gcggccgagc gcgccgtgga ccgcggactg cgccgcctcg acaagcgccg
     1201 gagcggctac cgcaagacga agctgacggt ggcggcggcc aaagccacgc cggagaccta
     1261 cagctcgccg cgctggcgtc agccgattgc accgggcgac gtggtgcccg ccgtcgtgat
     1321 gtcgctcccg aagggggccg cgggcgctcc gcgtatccgc atcgccgcca ccgagctgga
     1381 cctgccgaag gccggctacg cctggacgcg caaaaccaat cccgccgacc tgttctccgt
     1441 gggagacgtc atcgaggtgt cggtcggccc ggtcgtcaag gggcaataca cgcaggtgac
     1501 gctcgagcag gcgccgatcg tcgaaggcgc gctcgtggcc atcgacaacc gcaccgggca
     1561 gattcgcgcg atggtcggcg gcttcgactt cgcccgcagc aagttcaacc gcgccacgca
     1621 ggcccggcgc caggtgggct cgctcttcaa gccggtgctc tactccgccg cgatcgacaa
     1681 gggcttcacg gcggaaaccg tgttcatcga cgagccggtg tcgtacgtcg ccggaccgaa
     1741 tcagccgccg tatcgcccgc tgaactacga ccgcaagtac gaggggccgg tcacgctgcg
     1801 ccacgcgctc gaggactcgc gcaacatccc cgcggtgaaa gcgctcgagg ccgtcggccc
     1861 cgaccaggtg atcggctacg cgaagcgtct cggcctcacc ggcaactacc agccgtattt
     1921 gtcgctggcc ctcggcgccg ctgaatcgac gctgctcgag atgacgagcg cctattcggc
     1981 gttcccgaac cagggcgtgc gcatgacgcc gtatgccgtg cgctcggtgt cggaccgcga
     2041 gggcaccgtc atcgaggaga accgccccga gccgcgcgag gcgctgcgcg ccgacaccgc
     2101 gttcctgatg gcgcacctcc tcgaaggcgt cgtccagcgc ggcacggcct tcgccgccaa
     2161 gtcgctcgaa tggccgctcg ccggcaagac cggcacgatg gacgagttca ccgacgcgtg
     2221 gttcgtcggc ttcgacccga acctcacggt cggcgtgtgg gtgggctacg acgagaagaa
     2281 gccgctcgga cggggcgaga cgggggcgca agcggcgctc ccgatctgga tggatgtgat
     2341 gcgcgcgtac atcgaggcgc atggcgaccg caacgcgcct cccacattcg aagcgcccgg
     2401 caacatcgtg ttcgtcaatc ttgattcggg gcttcccgaa gcgttcatca agggaacgca
     2461 accggcagga ctgattcccg ccgaccagcc ggcgccgccg cccgttgcag ctgcgccgcc
     2521 ggccgtcga
//
LOCUS       DASSYW010000939         2446 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1391177, whole genome shotgun sequence.
ACCESSION   DASSYW010000939 DASSYW010000000
VERSION     DASSYW010000939.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2446)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2446)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2446
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1391177"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(100..618)
                     /locus_tag="VFN38_14835"
     CDS             complement(100..618)
                     /locus_tag="VFN38_14835"
                     /inference="COORDINATES: protein motif:HMM:NF019819.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipocalin family protein"
                     /protein_id="HET9013099.1"
                     /translation="MATGAGALAGQERSDAVRAIPSLDLEGYAGRWHEVARLPNRFQA
                     RCASNVTATYELLRDGAIRVVNVCLTAEGDSVRAEGRARLADQRGPASRLKVRFAPAI
                     LSFLPAVWADYWVLDLTEGFQAALVGSPDRRYLWVLSREPQLDQVTYARLLGTAAAQG
                     FDTARVQRTIVR"
     gene            765..1679
                     /locus_tag="VFN38_14840"
     CDS             765..1679
                     /locus_tag="VFN38_14840"
                     /inference="COORDINATES: protein motif:HMM:NF014375.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="B12-binding domain-containing protein"
                     /protein_id="HET9013100.1"
                     /translation="MARSKPTDLPRHPIGVVRERTGLSVEVLRAWERRYAVVRPSRSK
                     EGRRLYSDADVERLGLLHRASRAGRPVGALVTLSTGELRQMVLEDAERARRTPAPSGS
                     HREHALEAVRQLAPERLEALLQRALFSLGAFTFLEEVVAPLLEEIGDAWHEGLITVAH
                     EHAASAAVLQVLGGLARALEVSGNAPRVVLATPRGERHAFGAMMAAVAAAHDGWHVTW
                     LGSDLPAAQVAAGAETCEARIVGLGSVARDAAGLKREVTSLRALLPSHVPVLIGGPGA
                     ARLRDMRGVTKVRDLSHWRALLTTARAT"
     gene            1679..2443
                     /locus_tag="VFN38_14845"
     CDS             1679..2443
                     /locus_tag="VFN38_14845"
                     /inference="COORDINATES: protein motif:HMM:NF018649.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1295 domain-containing protein"
                     /protein_id="HET9013101.1"
                     /translation="MAMVVVVVTGVVLQMVLWAVQRRTGNAATADAGWTVLVAGGAVA
                     AAILGDGATTRRVFVAGLAAMWALRLGAYLVRDRVLARAPEDGRYRALRERWGRAAER
                     NFLFLYLAQVPVAALFVIPIAVAMRGGPLDAWAAAGTAVWFVAVLGESLADRQLARFR
                     GDPGHHGAVCRAGLWRWSRHPNYFFEWLHWWAYVLIGHAQLPTLLGPVMMLAFLFRIT
                     GIPYTERQALRSRGDAYRAYQRTTSAFFPWPPRDAA"
BASE COUNT          338 a          864 c          848 g          396 t
ORIGIN      
        1 agagctcgag cgcctcttgt gcgttcgcgc gcagagcata ctccgtgaag agtctgagct
       61 tcgcccggcg cagcgtgtct gctcctgaag agaaccgtct cagcgcacga tcgtgcgttg
      121 cacgcgcgca gtgtcgaacc cctgggctgc cgccgtgccg agcaggcggg cgtaggttac
      181 ctggtcgagc tgcggctccc gcgacaggac ccagaggtaa cgccggtccg gtgacccgac
      241 gagtgcggcc tggaagcctt ccgtcaggtc caggacccag tagtccgccc acaccgcggg
      301 aagaaacgag aggattgccg gcgcgaatcg aaccttgagc cgcgacgcgg gtccgcgctg
      361 gtcggccagt cgcgcccgcc cctcggcgcg cacgctgtcg ccctccgcgg tgaggcagac
      421 gttcaccacg cggatcgccc catcccgaag caattcgtag gttgccgtga cgttcgatgc
      481 gcagcgagcc tggaatcgat tggggagccg cgcgacttcg tgccaccggc cggcgtatcc
      541 ctcgaggtcc agcgacggaa tcgcgcgcac cgcatcggac cgctcctggc ccgcgagcgc
      601 acccgcgccg gtcgccacga gcgttgccag ggatgcgaac gctctcgcgc cccgccgcgc
      661 gcaccggctc cggccccaca gcgcccttga aatttgcctt ctgtatagca taagtatcac
      721 tcactggctg gacatacaat gtacaacagc gtatcgtacc cgccatggcc cgatccaagc
      781 cgaccgacct cccacgccac cccatcggcg tcgtgcggga acggacggga ctctccgtcg
      841 aagtgctgcg cgcctgggaa cggcgctacg ccgtcgttcg tccctctcgg tccaaggagg
      901 gaaggcgcct ctattccgat gcggacgtcg aacgactcgg cttgctccac cgtgcttccc
      961 gtgccggccg tccggtgggc gccctggtca cgctgtccac cggcgagctg cggcagatgg
     1021 tgctcgagga tgcggagcgc gcgcgccgga cccctgcacc ctcgggatcg caccgggagc
     1081 acgcgctcga ggccgtgcgg cagctggctc ccgagcggct cgaggcgctg ttgcaacggg
     1141 ccctcttctc actcggcgct ttcacgttcc tcgaggaagt cgtcgctccc ctgctcgagg
     1201 agatcggtga tgcgtggcac gaagggctga tcaccgtcgc gcacgagcac gcggcctcgg
     1261 ctgcggtcct ccaggtcctg ggcgggctgg cgcgcgcgct cgaagtgtcg ggcaatgcgc
     1321 cgcgtgtggt cctcgccacg ccgcgcggcg agcgccacgc cttcggcgcg atgatggccg
     1381 ccgtcgccgc cgctcacgac ggctggcacg tcacctggct cggcagcgac ctcccggcgg
     1441 cccaggtcgc ggccggggcg gagacgtgtg aagcccggat cgtcgggctg ggcagcgtcg
     1501 cgcgcgacgc ggcgggcctg aagcgcgaag tcacgtcctt gcgcgccctg ttgccgagtc
     1561 acgtgccggt cctgatcggc ggaccgggcg ccgccaggct gcgcgacatg cgtggtgtga
     1621 cgaaagtgcg tgacctttcc cactggcggg cactcctcac cacggcgcgc gcgacgtgat
     1681 ggccatggtc gtcgtggtcg ttaccggagt cgtgctccag atggtgctct gggccgtgca
     1741 gcgccgcacg ggaaacgccg cgacggccga cgcaggatgg acggtgctgg tggcgggtgg
     1801 ggccgtggcg gccgcaatcc tgggagacgg agccaccacg cggcgcgtct tcgtagccgg
     1861 cctcgccgcc atgtgggcgc tccgcctcgg tgcgtacctg gtgcgcgatc gagttctggc
     1921 gcgggctccg gaggacgggc ggtaccgcgc cctgcgtgaa cggtggggaa gggcggcgga
     1981 gcgcaacttt ctgttcctct acctcgccca ggtgcccgtg gcggctctgt tcgtgattcc
     2041 gatcgccgtc gcgatgcgcg gcggcccgct ggacgcgtgg gctgccgccg gcaccgcggt
     2101 ctggttcgtc gccgtgctcg gcgaatcgct cgccgatcgg cagctcgccc gattccgggg
     2161 cgatccagga catcacggcg ccgtgtgccg cgccggcttg tggcggtggt cacggcatcc
     2221 gaactacttc ttcgaatggc tgcactggtg ggcgtacgtc ctgatcggac acgcgcaact
     2281 gccgaccctg ctcggtcccg tcatgatgct cgccttcctt ttccgcatta ccggcattcc
     2341 gtacaccgag cggcaggcgc tccgaagccg cggcgacgcc tatcgcgcct atcaacgaac
     2401 gacgagcgca ttttttccat ggccaccccg ggacgcggcg tgaaga
//
LOCUS       DASSYW010000940         2111 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_193687, whole genome shotgun sequence.
ACCESSION   DASSYW010000940 DASSYW010000000
VERSION     DASSYW010000940.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2111)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2111)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2111
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_193687"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..440
                     /locus_tag="VFN38_14850"
     CDS             <1..440
                     /locus_tag="VFN38_14850"
                     /inference="COORDINATES: protein motif:HMM:NF020071.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-dependent helicase C-terminal
                     domain-containing protein"
                     /protein_id="HET9013102.1"
                     /translation="DLDLVALSEAAAASARSIHDLDIGAALPWEAARVLDSSAPASLP
                     VPSGRSARLEYREDGTVYAAVKLQELFGLAETPRLGPGQQPLVIELLAPNGRPVQTTT
                     DLRSFWERTYPEVRKELRGRYPKHPWPEDPWTATPTHRTTRRA"
     gene            443..925
                     /locus_tag="VFN38_14855"
     CDS             443..925
                     /locus_tag="VFN38_14855"
                     /inference="COORDINATES: protein motif:HMM:TIGR00040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase family protein"
                     /protein_id="HET9013103.1"
                     /translation="MPSARAVIGLISDTHGRVRPQLADVFSAVDCIVHAGDVGGVAVL
                     RALSAIAPVHAVSGNVDDRHDPSLPRVRTLEVGGRSLHVSHGDELGSPTPDALLARYG
                     ADILVYGHTHRALLFRAPDGRVVVNPGAAGPPRFNLKPSVAILDITGGVVDVRFIDLG
                     "
     gene            944..>2111
                     /locus_tag="VFN38_14860"
     CDS             944..>2111
                     /locus_tag="VFN38_14860"
                     /EC_number="3.4.17.19"
                     /inference="COORDINATES: protein motif:HMM:NF014165.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004181 - metallocarboxypeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase M32"
                     /protein_id="HET9013104.1"
                     /translation="MPTALEMLDARLRDVADLRHAADLLEWDERVCMPPGGGPVHGEM
                     QATVRRIAHEQFSAPAVGDLIAAAQHDLGSADPDSADARRVAVTARDYRKATQVPAAF
                     VAELAQVVSASQHAWGEARAASDFAAFLPHLERVIALKRQYVSFFPPGAHPYDTLLDD
                     YEPGLTTADVQAIFKVLRPAQVTLLKSIAARPPIDDAVLRQPYAESALLEFAVEVATA
                     FGFDWTRGRQDKSTHPFATSFGSDDVRITTRFMERYPFSLLFGTLHETGHALYEQGVG
                     RAHQRTQLEGGASLGVHESQSRLWENLVGRSRPFWEHFYPKLQSRFAGQLGAVTLDQF
                     YRAINVVQPSLIRVEADEATYNMHVMMRVELEIALVEGTLAPADLPEAWNRLMEE"
BASE COUNT          310 a          735 c          736 g          330 t
ORIGIN      
        1 tcgacctcga cctcgtcgcg ctgtccgaag ccgccgcggc gtcggcgcgc tcgattcacg
       61 atctcgacat cggcgcagcg ctgccgtggg aggccgcgcg agtgctcgac tccagcgcac
      121 cggcatcgct gccggtgccg agcggccggt cggcgcggct cgagtatcgc gaggacggca
      181 ccgtctacgc ggcggtgaag ctgcaggagc tgttcgggct cgcggagacg ccgcgtcttg
      241 gacccgggca gcagccgctg gtgatcgagc tgctggcccc gaacggccgg cccgtgcaga
      301 cgaccaccga cttgcgcagt ttctgggagc gcacctatcc cgaggtgcgg aaggagctgc
      361 gcgggcgcta cccgaagcac ccgtggccag aagatccctg gacggccacg cctacacacc
      421 ggacaactcg acgcgcgtga cgatgccctc tgcccgcgcg gtgatcggac tcatctcgga
      481 cacgcacggg cgcgtcaggc cgcagctggc ggacgtgttc tccgccgtcg attgcatcgt
      541 gcacgcgggg gacgtcggcg gcgtcgccgt gctgcgtgcg ttgtcggcca tcgctcccgt
      601 gcacgccgtc tccgggaacg tggacgaccg gcacgatccg tcgttgccgc gtgtccgaac
      661 gctggaagtg ggcggccggt ccctgcatgt gagtcacggg gacgaactcg gcagcccgac
      721 gcccgacgcg ttgctcgcac gctatggggc cgacatcctc gtctatggcc acacgcaccg
      781 ggccttgttg ttccgggcgc cagatggacg cgtggtggtc aatccgggtg cggcgggccc
      841 gccgcgcttc aacctgaagc cgagcgtggc gatcctggac atcaccggcg gcgtggtcga
      901 cgtcaggttc atcgacctgg gctgagcgga tacgatcagg gcgatgccta ccgcgctgga
      961 aatgctggat gcccgcctcc gggacgtcgc cgatcttcgc cacgctgccg acctgctcga
     1021 gtgggacgaa cgggtgtgca tgccgccggg cggcgggcct gtccacggcg agatgcaggc
     1081 gaccgtccgc cgcatcgcgc acgaacagtt ctcggctccg gccgtcggcg atctcatcgc
     1141 cgcggcgcag cacgatctcg ggagcgcgga tccggacagc gccgacgccc gccgggtcgc
     1201 ggtcaccgcg cgcgactacc gaaaggccac gcaggtgccg gcggccttcg tcgccgagct
     1261 ggcgcaggtc gtgtcggcct cgcagcacgc gtggggcgag gcacgggcgg ccagcgactt
     1321 cgcggcgttt ctgccgcacc tcgagcgcgt gattgcgctc aagcggcagt acgtcagctt
     1381 ctttccgccg ggcgcgcatc cctacgacac gctgctcgac gactacgagc ccggcctcac
     1441 caccgcggac gtgcaggcga tcttcaaggt gctgcgtccg gcccaggtga cgctgctcaa
     1501 gtcgatcgcc gcgcggccgc ccatcgacga cgccgtgttg cgtcaaccgt acgcggagtc
     1561 agcgctgctg gagttcgcgg tggaggtggc caccgcgttc gggttcgatt ggacgcgggg
     1621 gcgccaggac aagtcgacgc atccattcgc gacctcgttc ggctcggacg acgtgcgcat
     1681 cacgacgcgg ttcatggagc gctacccgtt ctcgctgctg ttcggaacgc tccacgaaac
     1741 ggggcacgcc ttgtatgaac agggcgtcgg acgcgcccac cagcggaccc aactcgaagg
     1801 cggcgcgtcg ctcggggtgc acgagtccca gagccggctg tgggagaacc tcgtgggccg
     1861 ctcgcgcccg ttctgggagc acttctatcc caagctccag tcccgtttcg ccgggcagct
     1921 tggggccgtg accctcgacc agttctatcg agccatcaac gtggtgcaac cgtcgctcat
     1981 ccgcgtcgaa gccgacgagg cgacctacaa catgcacgtg atgatgcgtg tcgagctcga
     2041 gatcgcgctc gtggaaggca ccctcgctcc ggccgatctg cccgaggcct ggaaccgcct
     2101 gatggaggag t
//
LOCUS       DASSYW010000941         2039 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_83127, whole genome shotgun sequence.
ACCESSION   DASSYW010000941 DASSYW010000000
VERSION     DASSYW010000941.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2039)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2039)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2039
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_83127"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..891
                     /locus_tag="VFN38_14865"
     CDS             <1..891
                     /locus_tag="VFN38_14865"
                     /inference="COORDINATES: protein motif:HMM:NF014895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative PEP-binding protein"
                     /protein_id="HET9013105.1"
                     /translation="EEIAAQDVDGVGLLRAEFMMLSALEGAHPRELLARGEGDAFVRR
                     MTDGLRTFAAAFAPRPVIYRAMDFRTNEFRGLAGGETHEPQEANPMIGYRGCFRYTRE
                     PDLFALELRAIADVRRELPNLHLMLPFVRTGWEMQACRALIDKSPLADSRGLELWVMA
                     EVPSVVAWLGEYVRLGVTGVSIGSNDLTQLMLGVDRDSAQLAPHFDERDRAVMHAIHA
                     IIARAHRFGITASICGQAPSVYPEVVAQLVRWGIDSISVNPDAIERTRRSTAMAEQRV
                     LLDAAHRRSDRLRHNHRRTR"
     gene            888..1544
                     /locus_tag="VFN38_14870"
     CDS             888..1544
                     /locus_tag="VFN38_14870"
                     /inference="COORDINATES: protein motif:HMM:NF016836.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BON domain-containing protein"
                     /protein_id="HET9013106.1"
                     /translation="MKSDSTIQKDVIDEVRWDPRILSREIGVAAKDGVVTLSGTVMSY
                     AEKWAAERAAERVSGVKAVASELEVVLPAQHTRTDSVLAHRIIEAFKWDIQVPDDKVK
                     VLVRDGWVQLDGQFEWQYQKDAAARAVRNITGVRGLTNSITLAPPAVSAYDVSRKIKA
                     ALHRQAEAEADRISVTTNEHVVTLQGTVPTFAERRAIEWAAWSAPGVREVHDQLRVGI
                     "
     gene            1657..>2039
                     /locus_tag="VFN38_14875"
     CDS             1657..>2039
                     /locus_tag="VFN38_14875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013107.1"
                     /translation="MRPITALLSLALLAGCRSAPPSVRLQGEPVAIAWLAGDWSGEYW
                     GAATGRSGSISFVLPPGTDSLYGDVTMLTSAGRPMTSVDALERHRLHVRSAQSLRIDF
                     VSVGGGTVTGTLEPYVNPDCDCVVTT"
BASE COUNT          301 a          691 c          736 g          311 t
ORIGIN      
        1 gaggagatcg ccgcgcagga tgtggatggc gtcgggctgc tgcgcgccga gttcatgatg
       61 ctgtcggccc tcgagggggc gcatccgcgc gagctgctgg ctcgcgggga gggcgacgcc
      121 ttcgtgcgcc gcatgaccga cggcctgcgc accttcgccg ccgccttcgc gccgcgtccg
      181 gtgatctatc gggcgatgga cttccgcacg aacgagttcc gcgggctcgc cggcggcgag
      241 acgcacgagc cccaggaagc gaacccgatg atcggctatc gcggctgctt ccgctacacg
      301 cgcgagcccg acctgttcgc cctcgagctg cgcgccatcg ccgacgtgcg gcgcgagctg
      361 ccgaacctgc acctgatgct tcccttcgtg cgcaccggtt gggagatgca ggcgtgccgc
      421 gccctgatcg acaagagccc gctcgccgat tcgcggggcc tcgagctgtg ggtgatggcg
      481 gaagtcccgt cggtggtggc ctggctgggt gaatacgtcc gcctgggtgt gaccggcgtc
      541 tcgatcggct cgaacgatct cacccagctg atgctgggcg tggatcggga cagcgcgcag
      601 ctcgcacccc acttcgacga gcgcgatcgc gccgtgatgc acgccattca tgcgatcatc
      661 gcgcgcgccc accggttcgg catcacggcg tcgatctgcg gtcaggcgcc gtcggtgtac
      721 ccggaggtcg tcgcgcagct cgtgcgctgg gggatcgact cgatctcggt caacccggac
      781 gcgatcgagc gcacccgacg ctccaccgcg atggccgagc agcgcgtgct gctcgacgcc
      841 gcgcatcgcc ggagcgatcg gctccggcac aaccacagga ggacgagatg aagagcgatt
      901 ccaccatcca gaaggacgtc atcgacgagg tgcgctggga tccgcgcatc ctgagccgcg
      961 agatcggcgt cgccgcgaag gacggggtgg tgaccctgtc cggcacggtg atgagctacg
     1021 ccgagaagtg ggcggccgag cgcgccgccg agcgcgtgtc gggcgtgaag gccgtcgcga
     1081 gcgagctgga agtcgtgctg cccgcgcagc acaccaggac cgacagtgta ctcgcccatc
     1141 gcatcatcga ggcgttcaag tgggacatcc aggtgcccga cgacaaggtc aaggtgctgg
     1201 tgcgggatgg ctgggtgcag ctcgacggcc agttcgagtg gcagtaccag aaggacgccg
     1261 ccgcccgtgc ggtgcgcaac atcaccggcg tgcgtggact gacgaactcc atcacgctcg
     1321 cgccgcccgc cgtctcggcg tacgacgtga gccggaagat caaggcggcg ctgcaccggc
     1381 aggcggaggc cgaggcggat cgcatctcgg tcacgacgaa cgagcatgtc gtgacgctcc
     1441 agggcacggt gcccaccttc gccgagcgtc gcgcgatcga gtgggcggcg tggtcggcgc
     1501 ccggggtgcg cgaggtgcat gaccagcttc gcgtcggcat ctgagcgcgt cccgccgcgg
     1561 ggcaggcggg ggaatcccgg ccagggaacg ggctttctcc gatggtacgt ccctgccccg
     1621 cggcgcatcg tgtcgctgta cacacgggga ggaatgatgc gcccgatcac tgcgctgctg
     1681 tcgctcgcct tgctcgccgg ctgtcggtcg gcacctccgt cggtacgtct ccagggggaa
     1741 ccggtcgcca tcgcctggct cgccggcgac tggagcggcg aatactgggg tgccgcgacg
     1801 ggacgctccg gcagcatctc cttcgtcctg ccccccggca ccgacagcct gtatggcgac
     1861 gtcacgatgc tcacgtccgc ggggcggccg atgacgtcgg tcgacgcgct cgagcggcac
     1921 cgcctgcacg tgcggtcggc gcagtcgctg cgcatcgatt tcgtgtcggt gggcggcggc
     1981 accgtgaccg gcacgctgga accgtacgtc aatcccgact gcgactgcgt ggtgaccac
//
LOCUS       DASSYW010000942         2163 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1298953, whole genome shotgun sequence.
ACCESSION   DASSYW010000942 DASSYW010000000
VERSION     DASSYW010000942.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2163)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2163)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2163
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1298953"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1636)
                     /locus_tag="VFN38_14880"
     CDS             complement(<1..1636)
                     /locus_tag="VFN38_14880"
                     /inference="COORDINATES: protein motif:HMM:NF012471.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M14 metallopeptidase family protein"
                     /protein_id="HET9013108.1"
                     /translation="MLPLQRRTALAAALAAALTLAALYPRALSAQDGWTPRERVPAPS
                     ALLGFEVGADRKLADWPQITTYYSRLAAATPAVRVDTLGPSTDGRPFVVVTLSSPANM
                     RNLEAIRRAQGRLADPRALDAAEERRLVATQPSVILISCNIHSSEIASSQMAMELAYR
                     LVTVDTLQRLLERTVVLLVPSMNPDGEQMIVDWYRQGVGTKFEGGAMPWLYHRYVGHD
                     NNRDWYMITQRETRLVTDLLYRRWSPEVFYDVHQQGSFGMRLTVPPHVDPIDPNIDPV
                     IVRGISLVGATMSQALEERGKAGVGDGATYDLWWNGGARSTPTRHNMIGLLTEAASAR
                     IATPIEIDSSRLRGQGRGLPSYQRRVNFPNPWPGGTWRLRDIVDYELIAAEALVRLAA
                     ERREELVRNFVGLGRRQVELGRTRSPRAFVIPAAQWDPSAAERLVEVLQLGGVEVARA
                     TTPFTAGGARYGAGSWIVPMAQPYRAHAKDLLEVQRFPRLEQYPGGPPQRPYDVAGWT
                     LPFQMGVRAVAVDDAPQLANASSLATRTAGGGTTWRA"
     gene            1767..2108
                     /locus_tag="VFN38_14885"
     CDS             1767..2108
                     /locus_tag="VFN38_14885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013109.1"
                     /translation="MAVVPPYTEHFRTAVLGTIFAARTAVVHRLHAGDTLILVPDPPG
                     TEVPAVWVHAPGGDVIGHLSLQIAAWLAPWMLDGGRCQATVEKVGTDDVESWRRLIIR
                     VDCRVGAEPVD"
BASE COUNT          306 a          778 c          772 g          307 t
ORIGIN      
        1 ccgcccgcca cgtcgtcccg ccgcctgccg tgcgcgtcgc cagcgacgaa gcgttggcga
       61 gctggggcgc gtcgtccacc gcgaccgcgc gtactcccat ctggaacggg agcgtccacc
      121 ccgccacgtc gtacgggcgc tggggcggcc cgccgggata ctgctccagt cgcgggaagc
      181 gctgcacctc gagcaggtcc ttggcgtggg cccggtacgg ctgcgccatc ggtacgatcc
      241 agctccccgc gccgtagcgc gcacctcccg ccgtgaacgg cgtcgtcgcc cgcgccacct
      301 ccacgcctcc gagctggagc acctcgacca gtcgctccgc ggcgctgggg tcccactgcg
      361 cggcgggaat cacgaaggcg cgcggcgacc gcgtccgtcc cagctccacc tgacggcggc
      421 cgagtccgac gaagttgcgc accagctcct cgcgccgctc ggcggccaga cgtacgagcg
      481 cctcggcggc gatcagctcg tagtccacga tgtcgcgcag gcgccaggtc ccgcccggcc
      541 acgggttcgg gaagttgacc cgccgctgat agctggggag cccgcgcccc tgtccgcgga
      601 gccgcgagct gtcgatctcg atcggcgtgg cgatccgcgc gctggccgcc tcggtgagca
      661 ggccgatcat gttgtgccgc gtcggggtcg agcgggcgcc gccgttccac cagaggtcgt
      721 aggtcgcacc gtcacctacc cccgccttcc cgcgctcctc gagcgcctgc gacatcgtcg
      781 cgcccacgag gctgatcccg cgcacgatca ccgggtcgat gttcgggtcg atcgggtcca
      841 cgtggggggg caccgtgagc cgcatcccga aggagccctg ctggtgcacg tcgtagaaca
      901 cctccgggga ccagcgccgg tagagcaggt cggtcacgag ccgcgtctcg cgctgggtga
      961 tcatgtacca gtcgcggttg ttgtcgtgcc ccacgtagcg gtgatacagc cagggcatcg
     1021 ctcccccttc gaacttcgtc cccaccccct ggcggtacca gtccacgatc atctgctcgc
     1081 cgtcggggtt catcgagggg acgaggagca ccacggtccg ctccagcagc cgctgcagcg
     1141 tgtctaccgt gaccagccgg taggcgagct ccatcgccat ctgggacgac gcgatctcgc
     1201 tcgaatggat gttgcagctg atcaggatca cgctcggctg cgtggccacc agccgccgct
     1261 cctcggcggc gtcgagagct cgcgggtcgg cgagccgccc ctgcgcgcgc cggatcgcct
     1321 cgagattccg catgttggcg ggggaggaga gcgtgacgac gacgaagggg cgtccatcgg
     1381 tggacgggcc gagcgtgtcc acgcgcaccg ccggagtcgc cgccgccagc cgggagtagt
     1441 acgtcgtgat ctgcggccag tcggccagct tgcggtcggc gccgacctcg aaccccagga
     1501 gcgcgctcgg cgccgggacg cgctcgcgag gagtccagcc gtcctgcgcg gagagggcgc
     1561 ggggatacag ggcggcgagc gtcagcgcgg cggcgagggc ggccgccagt gccgtccgtc
     1621 tctggagagg gagcatcgag aagtgagcgg tggggggtgt cgcagcgggc gacgcgaagc
     1681 taactcattc tcggggcgcc tggcgagacg cctccgcccg gcgcccgtcg ccggagcgtc
     1741 ctcaacggga tgacgggaga cgcagcatgg ccgttgttcc accgtacacg gagcatttcc
     1801 gcaccgcggt cctcggcacc atcttcgccg cccggacggc cgtcgtgcac cggctgcacg
     1861 cgggcgacac gctcatcctc gtccccgatc cgcccggcac cgaggtcccc gccgtctggg
     1921 tccatgcgcc cggcggcgac gtcatcggcc acctctccct ccagatcgcc gcatggctcg
     1981 cgccctggat gctcgacggc ggccgctgtc aggccacggt cgagaaggtc ggcaccgacg
     2041 acgtggagag ctggcggcgg ctgatcatcc gcgtggactg ccgggtggga gcggagccgg
     2101 tcgactagac ggcgacggcg gaatgaggaa tgaagaatca ggaatgagga atgaggaatg
     2161 agg
//
LOCUS       DASSYW010000943         3329 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_858874, whole genome shotgun sequence.
ACCESSION   DASSYW010000943 DASSYW010000000
VERSION     DASSYW010000943.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3329)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3329)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3329
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_858874"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..986
                     /locus_tag="VFN38_14890"
     CDS             <1..986
                     /locus_tag="VFN38_14890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HET9013110.1"
                     /translation="AAGAPTLISSDPTAQFEPYRTELTGYAYRMLGSSFEAEDAVQET
                     FVRAWKAFDRFEGRAALRSWLYRIATNVCLDMLSSRQRRARPMDLAPALTADHPLGAA
                     LPEEHWVEPVPDARVIPTGGDPAKVSELRESIRLAFVAALQHLPPRQRAVLILREVLQ
                     WQASEVAELLEASVASVNSALQRARATMAAKEPDAIDKPEPLTDEQRALVDRYVDAFE
                     RYDMGSLTALLHEDARWNMPPYALWLQTHLDIEKWCLGPGIGCRGSRLIPTFANGAPA
                     FGQYKPSPDGGFEPWSLQVLELSGDRISGITFFLDTARMFPLFGLPPRLDA"
     gene            complement(963..1439)
                     /locus_tag="VFN38_14895"
     CDS             complement(963..1439)
                     /locus_tag="VFN38_14895"
                     /inference="COORDINATES: protein motif:HMM:NF013868.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HET9013111.1"
                     /translation="MSSAVSCRLWVGASEIVRVAPPTLPTGRRKEAPAVGASGASSAA
                     TFRVDRSAQEPGSVVLRLSGRIGRADVAMLGARAAEALAGRHITTAICDVRGLREPDA
                     AAVDAVCRIRLAARRHRCEIVLCGAPKRLLELLDLMGLCDAFPLAPGDRSGVQPRR"
     gene            complement(1489..2544)
                     /locus_tag="VFN38_14900"
     CDS             complement(1489..2544)
                     /locus_tag="VFN38_14900"
                     /inference="COORDINATES: protein motif:HMM:NF019845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase/quinone reductase family protein"
                     /protein_id="HET9013112.1"
                     /translation="MPAPQQPIEIREFNRPDLPLGAALLRTARSEVCGTDVHLWHGRL
                     SGVPYPIIPGHVSAGTLADVRGSLTGLDGAALREGDRVVFFDVHRTCGRCRACTVHRT
                     PTRCVARRVYGITDPASEGLFGGWSQAIYLEPGVALARLPDRVAFDDYIGAGCGLITA
                     VHVIERAMLRPGDAVLVQGTGAVGLSTIALARLSGASTIVAIGAPTARLDLARAMGAD
                     HAFDLSATTSGQRLEAVRALTHGEGADVVVEAAGSARAIEEGLSLVRDGGRYVVAGTA
                     GGSPTAPAWVHNLRAHPEVRVEARGRTFQARATIVDEATRQRLWSAHVAERPEFAEYP
                     AMARRVIPVITLEPIGD"
     gene            2684..>3329
                     /locus_tag="VFN38_14905"
     CDS             2684..>3329
                     /locus_tag="VFN38_14905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013113.1"
                     /translation="MALRILVASLAVVLCTSTASAQGYKPKKPRRQFITISTEWLNTQ
                     PLHFLEHPLQDLVGRDVAAAQFQNYDYHTRDEQILIDVLEFKRKGRGAGVTLYPFGLS
                     VGPALALRASVEDLPIIRIAFAGAGAPPDYSLSGARAYDFGAALYVADHSRGWGLGSH
                     AFVGGGFGRIRSDAADGTRIFAEGGGGLTSGPIGVDLSLKFGWNRLPTPVEHRFF"
BASE COUNT          507 a         1196 c         1136 g          490 t
ORIGIN      
        1 aggccgccgg ggccccgacc ctcatctcgt ccgacccgac cgcccagttc gagccgtacc
       61 gcaccgagct gacgggctac gcctatcgga tgctcggctc gtccttcgaa gccgaggacg
      121 ccgtccagga gacgttcgtc cgagcctgga aggccttcga tcgattcgag ggccgcgccg
      181 cgctgcgatc ctggctgtac cggatcgcca ccaacgtgtg cctcgacatg ctgagcagcc
      241 ggcagcgccg ggcgcgtccc atggacctgg cacctgcact caccgccgat catccgctgg
      301 gtgccgcgct gcccgaggag cactgggtcg agcccgttcc cgacgccagg gtcatcccga
      361 ccggcggcga tcccgcgaag gtcagcgagc tgcgcgaatc gatccgcctg gcgttcgtgg
      421 ccgcgctcca gcacctgccg ccgcgccagc gggcggtcct catcctgcgc gaggtgctgc
      481 agtggcaggc gagcgaggtg gccgaactgc tcgaggcgtc ggtcgcctcg gtcaacagtg
      541 cgctccagcg ggcacgggcg accatggccg ccaaggagcc agatgcgatc gacaagcccg
      601 aaccgctgac ggacgagcag cgcgccctcg tcgaccgcta cgtcgacgcg ttcgaacgct
      661 acgacatggg ctcgctcacc gccctcctcc acgaggacgc ccgctggaac atgccgccgt
      721 acgcgctctg gctgcagacc cacctcgaca tcgagaagtg gtgtctggga ccgggcatcg
      781 gctgccgcgg gtcccgcctg atcccgacgt tcgccaacgg cgcgcccgcg ttcggccagt
      841 acaagccgag ccccgatggc ggcttcgagc cctggtcgct gcaggtcctc gagctgtctg
      901 gcgaccggat cagcgggatc accttcttcc tggatacggc gaggatgttc cccttgttcg
      961 ggctaccgcc gcggctggac gcctgaccga tcgcccggcg cgagcgggaa ggcatcgcac
     1021 aggcccatca ggtcgagcag ctcgagcagc cgcttggggg cgccgcacag gacgatctcg
     1081 cagcgatggc gccgggccgc gagccggatc cggcagacgg cgtcgactgc ggcggcgtcc
     1141 ggctcccgca ggccacggac gtcacagatc gcggtcgtga tgtgtcgacc cgccagggcc
     1201 tcggcggctc gggcacccag catcgcaacg tctgcgcgtc cgatccggcc ggagaggcga
     1261 aggacgaccg agcccggctc ctgagcggat cgatcgactc ggaacgtcgc ggcggatgac
     1321 gcccctgagg cgcccacggc tggagcctcc tttcggcgtc cggtaggcaa ggtcggaggc
     1381 gccactcgaa cgatctcgct ggcgccaacc catagacgac acgagaccgc cgaactcatc
     1441 ggtcgccggt ccgttccctg gccttgacct cccgccgcgg acggctgctc agtcgccgat
     1501 cggttcgagc gtgatcaccg ggatgacccg gcgagccatg gcgggatact ccgcgaattc
     1561 tgggcgctcg gcgacatggg ccgaccacaa gcgctgtcgc gttgcctcgt cgacgatcgt
     1621 ggctctcgcc tggaaggtcc ggccgcgcgc ttccacccgg acctccgggt gcgcgcgcag
     1681 gttgtgcacc cacgccggcg cggtcggcga cccgccggcg gtgccggcga cgacgtagcg
     1741 gccgccgtcg cgcaccagcg agagcccctc ttcaatcgcg cgcgccgagc cggcggcttc
     1801 cacaaccaca tcggcgcctt ctccgtgtgt cagcgcgcgg accgcctcga gccgttgccc
     1861 ggacgtcgtt gccgacaggt cgaaggcatg gtcggcgccc atggcgcgcg ccagatcgag
     1921 gcgtgcggtc ggggcaccaa tcgcgacaat cgtcgacgcg ccgctcagcc gggcgagcgc
     1981 gatcgtgctc aagccgaccg cgccggtccc ctgcaccagc acggcgtccc ccggccgcag
     2041 catcgcgcgt tcgatgacgt ggactgccgt gatcaggccg cagccggccc cgatgtaatc
     2101 gtcgaacgcg acgcggtcgg gcagccgcgc gagcgccacg cccggttcga ggtaaatcgc
     2161 ctgcgaccac ccgccaaaca gcccttcgct cgcgggatcg gtaatgccgt agacgcggcg
     2221 agccacgcag cgcgtgggcg tgcgatgaac cgtgcacgcc cggcagcggc cgcacgtgcg
     2281 gtgcacgtcg aagaagacga cgcggtcccc ttcgcgaagc gccgcgccgt cgagtccggt
     2341 caacgaaccg cgcacgtccg cgagcgtgcc cgccgatacg tgtccgggga tgatggggta
     2401 cggtaccccg gacagacggc cgtgccacag gtgcacgtcc gtgccgcaga cctccgatcg
     2461 tgcggtccgc aacaacgcgg caccaagtgg cagatcggga cggttgaatt cgcggatttc
     2521 gatcggctgc tgtggggcgg gcatcacggc ggcgaggatg cagtctgtca cgtcggtacg
     2581 ttacccttgg agagaatatc atcgcggttc gcgctccgcg gcccttcgag agcctcaggg
     2641 ccgccctgag ctgcgtcgaa ggacggttcg cgggtcgaca tacatggctc ttcgcattct
     2701 ggtcgcttcc ctcgctgtcg tgctctgcac gtcgaccgcg tcggcgcagg gctacaagcc
     2761 caagaagccg agacggcagt tcatcacgat cagcaccgag tggctgaaca cgcagccgct
     2821 gcattttctg gagcaccctc tgcaggatct cgtgggccgc gacgtcgcgg cagcgcagtt
     2881 ccagaactac gactatcaca cgcgcgacga gcagattctg atcgacgtcc tcgaattcaa
     2941 gcggaaggga cgcggtgccg gggtcacgct gtatccgttc gggctgagtg tcggccccgc
     3001 gctggcgctg cgcgcgagcg tcgaggatct gccgatcatc cgcatcgcgt tcgccggcgc
     3061 aggcgccccg ccggactact cgctgagcgg tgcgcgcgcg tacgatttcg gcgcggcgct
     3121 ctacgtcgcc gatcactccc gggggtgggg gctgggcagc cacgccttcg tgggcggcgg
     3181 gttcggccgc atccgcagcg atgccgcaga cggcacccgc atcttcgccg aagggggcgg
     3241 cggactcacc tccggcccga tcggcgtgga cctgagcctg aaattcggct ggaaccggct
     3301 gccgacgccg gtcgaacatc gattcttca
//
LOCUS       DASSYW010000944         3333 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1815007, whole genome shotgun sequence.
ACCESSION   DASSYW010000944 DASSYW010000000
VERSION     DASSYW010000944.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3333)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3333)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3333
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1815007"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..788)
                     /gene="trpB"
                     /locus_tag="VFN38_14910"
     CDS             complement(<1..788)
                     /gene="trpB"
                     /locus_tag="VFN38_14910"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018036536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HET9013114.1"
                     /translation="MTTVDTDRLTPVFGRRDPDARGYFGAYGGRFVPETLVAPIEELT
                     EGFLAARSDPSFGDDFARLLKHYVGRPTPTYEAARFAGASGGKGVRIFLKREDLAHTG
                     AHKINNSLGQALLAKRMGKTRVVAETGAGQHGVATASACALLGLECHVYMGAEDMRRQ
                     APNVLRMRLLGAEVRQVDSGSKTLKDAINEAMRDWVANVGDTYYLLGSALGPHPYPLM
                     VREFQSVIGREARAQMLEQAGRLPDLVIACVGGGSNAIGIFDSFL"
     gene            complement(785..1462)
                     /locus_tag="VFN38_14915"
     CDS             complement(785..1462)
                     /locus_tag="VFN38_14915"
                     /inference="COORDINATES: protein motif:HMM:NF012900.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HET9013115.1"
                     /translation="MTLANTTANLANATTNPVPMLKICGMTRVGDALHAIREGATAVG
                     FVFWKGSPRYIEPDRAGEIIAALPATVTTVGVFVNEPVDSIRETARVAGLRLVQLHGH
                     ETPAYGDGIEQPVMRAVSLETMEETSRAWPPDTMLLLDSTDPSRRGGRASVDWSRAAL
                     VARHRRVVLAGGLTPENIEEAIMTVRPIGVDVASGVESAPGVKDLEKVARFLMNARSA
                     FARMVTP"
     gene            complement(1459..2286)
                     /gene="trpC"
                     /locus_tag="VFN38_14920"
     CDS             complement(1459..2286)
                     /gene="trpC"
                     /locus_tag="VFN38_14920"
                     /EC_number="4.1.1.48"
                     /inference="COORDINATES: protein motif:HMM:NF001377.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004425 - indole-3-glycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006568 - tryptophan metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
                     /protein_id="HET9013116.1"
                     /translation="MSARRHSAALGDGPDLLRTIVAATQQITDTRRAQEPAAALERRA
                     AARQPRGARFEAALAMAGRVNVIAECKRRSPSRGVLAAQYDPVSIARKYEAGGAAAIS
                     VLTEPTFFDGALAHLTAVREAVNLPLLRKDFVVDDYQLLEARAAGADAVLLIVAALDQ
                     PELVRLQTRAWTLDLAALVEVHDDEELARAVDSGARLIGVNNRNLRTLAVDVGASDRL
                     AAKLPAGVVGVSESGLQTRDDLERLAAAGYRAFLIGERFMTDPDPARAIADLIGARV"
     gene            complement(2283..>3333)
                     /gene="trpD"
                     /locus_tag="VFN38_14925"
     CDS             complement(2283..>3333)
                     /gene="trpD"
                     /locus_tag="VFN38_14925"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: protein motif:HMM:TIGR01245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004048 - anthranilate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HET9013117.1"
                     /translation="DSAELPRFVMLTPLIEKLLRHEDLSMEEATAAMREVMEGRVAPA
                     ALAAMLAALRMKGERPDELVGFARAMREHSVKVSRPDGELCDTCGTGGDRAGTFNISS
                     AAAIVVAACGVKVAKHGNRSVSSRCGSADVFEQLGVNLAAAPAVVERALHTGNIAFFF
                     APTFHPSMKHAGPTRREIGVRTAFNLLGPLTNPAGATRQVVGVPRPDLTDLLARSLRR
                     LGSARAWVVHGADGIDEISTTGHTKVSECRDGAVHTFFIHPTEFGIRKAALEELLGGD
                     AAENAAIVRRVLEGNPGAPRDAVVLNAGAALFVAGGVESVREGIRVAGHGIDSGAALA
                     TLDTMVQASRAEAVA"
BASE COUNT          557 a         1177 c         1061 g          538 t
ORIGIN      
        1 agaaagctgt cgaagattcc gatggcgttg ctgccgccac cgacgcaggc gatcacgagg
       61 tccggcaagc ggccggcctg ctcgagcatc tgcgcgcgtg cttccctgcc gatcaccgat
      121 tgaaactcgc ggaccatgag cgggtacgga tgcggcccga gcgccgatcc gagcaagtaa
      181 taggtatcgc cgacgttggc cacccagtcg cgcatggcct cgttgatcgc gtccttcagc
      241 gttttgctgc cggaatcgac ctgtcgcacc tcggcgccca gcagtcgcat tcgaagcaca
      301 ttcggcgcct gtcgtctcat gtcctcggcg cccatgtaga catggcactc gaggccgagg
      361 agcgcacacg cgctcgcggt cgccactccg tgctgaccgg cgcccgtctc ggcgaccacg
      421 cgcgtcttgc ccatgcgttt ggcgagcagc gcctggccga gcgagttgtt gatcttgtgc
      481 gcgccggtat gcgcgaggtc ctcgcgcttg aggaagatgc gaacgccctt gccgccactc
      541 gcccccgcga agcgtgcggc ttcgtaggtc ggcgtgggcc ggcccacgta gtgcttcagc
      601 aaccgcgcga agtcgtcgcc gaacgacggg tccgagcgcg cggcgagaaa tccctcggtc
      661 agctcctcga tcggcgcaac gagcgtctcc ggcacgaagc gcccgccgta ggcgccgaag
      721 tagccgcgcg catccggatc gcgccggcca aaaacggggg tcagtcgatc cgtgtcaacg
      781 gtggtcacgg ggtcaccatt cgcgcgaacg cagaccgcgc gttcatcaga aagcgtgcga
      841 ccttctcgag gtccttcacg ccgggagccg actcgactcc cgaggccacg tccacgccaa
      901 tcggccgcac ggtcatgatg gcttcttcga tgttctcggg cgtgagcccg ccggccagga
      961 cgacgcgccg atgacgtgca accagcgccg cgcgcgacca gtcaacggac gctcgcccgc
     1021 cgcgccgcga gggatcggtc gaatcgagca gcagcatcgt atctggcggc cacgccctcg
     1081 aggtttcctc catcgtctcg aggctcacgg cccgcatcac cggctgctcg atcccgtcac
     1141 cgtaagcggg tgtctcgtgg ccatgcagct gcaccagacg caaacctgcg actctcgccg
     1201 tctcgcggat gctgtccacc ggctcgttca cgaacacacc cactgtggtg acagtcgctg
     1261 ggagtgccgc aatgatctcg ccggcgcgat caggttcgat gtaccgcggg cttcccttcc
     1321 agaacacgaa tccaaccgct gtggcgccct cacggatcgc gtgcagcgcg tcgccgacgc
     1381 gtgtcatgcc gcagatcttg agcatgggca cagggttggt cgtcgcgttc gcgaggttgg
     1441 ccgtcgtgtt cgcgagcgtc atacgcgcgc tccgatgaga tcggcgatgg cacgggccgg
     1501 atccggatcg gtcatgaagc gctcgccgat caagaacgct cgatacccgg ctgcggccag
     1561 gcgttcgagg tcgtctctcg tctgcagacc gctttcactc accccgacga cgccggccgg
     1621 cagcttcgcg gcgagccgat ccgacgcgcc gacgtcgacg gccagcgtgc gtagattccg
     1681 gttgttcacc ccgatgagcc gcgcgccgct gtctaccgcc ctggccaact cctcatcgtc
     1741 gtggacctcg accagcgctg cgagatccaa cgtccaggcg cgcgtctgca accgcaccaa
     1801 ctcgggttga tcgagcgcgg cgacgatcag gagcacggcg tcggcgccag cggctctcgc
     1861 ttcgagcaac tgatagtcgt caacgacgaa gtccttgcgc agcagcggaa gattgaccgc
     1921 ctcccgtacc gccgtgaggt gcgcgagagc accgtcgaag aaggtcggct cagtcaacac
     1981 cgagatggct gctgcgcccc cggcttcgta cttccgggcg atcgataccg ggtcgtactg
     2041 cgcagcgagc acaccacgcg acggcgaccg acgcttgcac tcggcaatca cgttcacacg
     2101 gccggccatc gcaagcgccg cttcgaaacg agccccgcgc ggctgtctgg ccgccgcgcg
     2161 gcgttccaac gcggccgcgg gctcttgcgc ccgacgcgtg tcggtgatct gctgcgtcgc
     2221 cgcaacgatc gtgcgaagca gatcaggccc gtcgccgagc gccgcgctat ggcgacgggc
     2281 gctcatgcaa cggcctccgc acgcgatgcc tgcaccatcg tgtcgagcgt cgcgagtgcg
     2341 gcaccagagt cgatgccatg gcccgcaacg cgaatgccct cgcgcaccga ctcgactccg
     2401 cccgccacga acagcgctgc gccggcattg agcaccaccg catcacgcgg ggcaccaggg
     2461 ttcccctcga gcactcggcg cacgatggcg gcgttctcgg cggcatcacc gcccaggagt
     2521 tcctcgagcg cagccttgcg aatcccgaac tctgtcggat ggatgaagaa cgtgtggacc
     2581 gcgccgtcgc ggcattcgga caccttggta tgtcctgtcg tcgagatctc gtcgatgcca
     2641 tccgcgccgt gcacgaccca ggcacgcgcc gatccgagcc gtcgcaacga ccgcgcgagg
     2701 aggtcggtca aatccgggcg cggcacgccc accacctgtc gcgtcgcacc ggctggattc
     2761 gtcagcggac cgagcaggtt gaaggccgtc cgcacaccaa tctcgcgacg tgtgggccca
     2821 gcgtgcttca tggatgggtg gaacgtcggc gcgaaaaaga aggcgatgtt gcctgtgtgc
     2881 agcgcgcgct cgacgacggc aggcgcggcg gcgagattga cgccaagctg ctcgaacacg
     2941 tcggcacttc cgcaacggct cgacaccgat cgattgccgt gcttcgcgac cttgacgccg
     3001 caggccgcca cgacaatcgc ggccgctgac gagatattga aggtgccggc gcgatcgccg
     3061 ccggtgccac aggtgtcgca cagttcgccg tcaggtctcg acaccttcac cgagtgctcg
     3121 cgcatcgctc gcgcgaatcc gacgagctcg tccgggcgct cccctttcat ccgcagcgcc
     3181 gccaacatcg ctgccagggc agctggcgca acacggccct ccatgacctc gcgcatggcg
     3241 gcggttgcct cctccatgct gaggtcttcg tgacgaagga gcttctcgat gaggggcgtc
     3301 aacatcacaa atcgaggaag ttccgcagaa tct
//
LOCUS       DASSYW010000945         2072 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1833500, whole genome shotgun sequence.
ACCESSION   DASSYW010000945 DASSYW010000000
VERSION     DASSYW010000945.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2072
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1833500"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            306..941
                     /locus_tag="VFN38_14930"
     CDS             306..941
                     /locus_tag="VFN38_14930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013118.1"
                     /translation="MCAVLLGVAIAPRGAEAQGSASAGQLRALGPLTAMSAEVQTRLA
                     LSSAPPEVSSRASVYVLGGAGYTRTRVGTNGFSCLIEREFLETVEPVCYDAEGSATTL
                     LARLYREQLRARALSEAEVRRRIEAAYRAGRFRAPRKPGLVYMLAPEQRSWNPGTKSI
                     FQAGPHFMLYAPFATQADVGGSLGPNMPVVVWPGRPDALIIVMALHDAHGR"
     gene            complement(1045..>2072)
                     /locus_tag="VFN38_14935"
     CDS             complement(1045..>2072)
                     /locus_tag="VFN38_14935"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HET9013119.1"
                     /translation="TSSSPGGREHRVAMGLVAVVAAAATIAAATGIRQGGSVAPMTTT
                     GTVTSDDGTAIAFTRLGHGPALVLVDGALCFRQNGPSRDIAPLLASHFTVYAYDRRGR
                     GESGDTRPYAMARELEDLNAVIRETGDSAFVFGSSSGAALAMQGVAAGLPIRKLVLYE
                     PPLGESRPGGPSLEESRRQLEALVASGDRAGAVRYFLATVFGAPRAFVIAMPVLMPRT
                     WAKTKSVAHTLPYDFAILGDRSVLAERAKAIGVPTLVVGGGKSPAFLQRAVESVARAL
                     PNARAVLLPGQSHDASAAAKALTPVLTDFFAESARSNARELRDAATTDARRAAGAIRG
                     REPTPQS"
BASE COUNT          325 a          716 c          727 g          304 t
ORIGIN      
        1 ggccgcgccc tcgcggacga gcgccacttc gaattgctgg caagttcgcg ggaagcgagc
       61 aggaaattga cagcctcggg tgagcgtccg cgttacgctg cagcgacacg caccgcagat
      121 gcgaacggga cttcgagcag gacccgatgt gcctggaaca cgccacgcgc caccgcgatc
      181 agttcgtcgc gcggcgagac ggcggcgcgc catgcgcatc gaggcgttcg tggaatacga
      241 acgacagcgg cccgaccgaa cgacggagca catcgatgac tcgacgcggc acgatccgac
      301 tgacgatgtg cgccgtcctc ctcggcgtgg ccatcgctcc tcgcggggcc gaggctcagg
      361 gctcggccag cgccggccag ctgcgggcgc tcggccccct caccgcgatg agcgcggagg
      421 tgcagacgcg actggcgctc agctctgccc cgccggaggt ctcgagccgg gcgtcggtct
      481 acgtgctcgg gggcgcgggg tacacacgga ctcgcgtcgg gacgaacggc ttcagctgcc
      541 tcatcgagcg ggagttcctc gagaccgtgg agcccgtatg ctacgacgcg gagggaagcg
      601 cgacgacgct gctggcgcgg ctctatcggg agcagttgcg agcgcgggcc ctgtcggagg
      661 cagaggtgag acggcgcatc gaggccgcgt atcgagcggg ccgcttccgc gcaccgcgga
      721 agcccggact cgtctacatg ctggcgccgg agcaacgctc gtggaacccc ggcacgaagt
      781 cgatctttca agccgggccc cacttcatgc tctacgcccc gttcgcgacg caggccgacg
      841 tcggcgggtc cctgggcccg aacatgcccg tcgtggtctg gcccggtcgg ccggacgcgc
      901 tgatcatcgt catggcacta cacgacgcgc acggtcgctg accccggggc atgacatccg
      961 cgatcgctgc atgatgccca cccgtgccga gtagtagtag catcatgtca gcccactatc
     1021 gtgaagttca tcaggacgag cccattagga ctgaggcgtt ggctctcgcc cgcggatcgc
     1081 gccggcggcg cgtcgtgcat ccgtcgtagc cgcatcgcga agttcacgtg cattcgatcg
     1141 agcgctctcc gcgaagaagt cggtcaatac gggcgtgagc gcctttgccg ccgcggacgc
     1201 gtcgtggctc tggcccggca ggagtactgc gcgtgcgttg gggagtgccc tcgcgacgct
     1261 ctccaccgcg cgctgcagga atgccggact cttgccgcca ccgacgacga gcgtcggcac
     1321 cccgatcgcc ttcgcgcgct cggccagcac cgaccgatcg ccaaggatcg cgaagtcata
     1381 cggaagcgtg tgggcgaccg acttggtctt cgcccaggtg cgcggcatga gcacgggcat
     1441 cgcgatcacg aaggcgcggg gggcgccgaa cacggtggcg aggaaatagc gcaccgcgcc
     1501 ggcgcggtcg ccggaggcga ccagcgcttc gagctgacgt ctgctctcct ccagcgacgg
     1561 gccgccgggc cgggactctc cgagaggggg ctcgtacagt acgagcttcc gtatgggcag
     1621 gccggccgcg acgccctgca tggccagcgc ggcgccggac gatgagccga agacgaacgc
     1681 tgaatcgccc gtctcgcgaa tgacggcgtt cagatcctcg agctcgcggg ccatcgcgta
     1741 cggtcgcgtg tcgccgctct cgccccgacc tcgccggtcg taggcgtaca cggtgaaatg
     1801 cgaggcgagg agtggggcga tgtcccggct cggcccattc tgacggaagc agagtgcgcc
     1861 gtcgaccagg acgagcgccg ggccgtgccc cagtctggtg aacgcgatcg cggtgccgtc
     1921 gtcggacgtc accgttcctg tcgtcgtcat cggcgccaca ctgcctccct gtcggattcc
     1981 cgtcgctgcc gcgatcgtcg cggctgcggc gaccacggcg accaggccca tcgcgacgcg
     2041 gtgctcacgc ccccccggcg aggaactcgt tg
//
LOCUS       DASSYW010000946         4088 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1556761, whole genome shotgun sequence.
ACCESSION   DASSYW010000946 DASSYW010000000
VERSION     DASSYW010000946.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4088)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4088)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4088
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1556761"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..192
                     /locus_tag="VFN38_14940"
     CDS             <1..192
                     /locus_tag="VFN38_14940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013120.1"
                     /translation="TLIASGPMDPRSGGALLLRVPDDDVHGALDAVRDGDPYVTFGVA
                     QYELIPWGVNTGREALDAL"
     gene            complement(202..1461)
                     /locus_tag="VFN38_14945"
     CDS             complement(202..1461)
                     /locus_tag="VFN38_14945"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HET9013121.1"
                     /translation="MRARHVLAGIPFALTALGSPLRAQSPAQLAARADVRAVLDAIRA
                     DNAWTLDQQVALCEIPAPPFMETARGLAYKAAFEKLGLTNVRVDAVGNVLGERRGTGA
                     GPTVVLAGHLDTVFPEGTDVRVKKENGRLTGRGIGDDCRGLAVVLATARALQASDVRT
                     PGTIVFVGNVGEEGPGNLRGTRHLFDKELAGKIDYFISVDGTGGGITSRAVGSHRYRV
                     TYKGRGGHSYGAFGNPNPAHALGRAIAAIADLRVPTAPKTTFNVGIVRGGTSVNSIPF
                     EASMDVDMRSESAASLARLDAQVQRALRRALAAENARWPRASDRLTLAVDTVGIRPAG
                     TQPDTARIVRVASDAAKVLGWTAELSASSTDANVPIGMGLPGLTIDGGGKGGGAHGLD
                     EWYEYGPNGWLGPQWAALLVLSLAGAR"
     gene            complement(1512..2738)
                     /locus_tag="VFN38_14950"
     CDS             complement(1512..2738)
                     /locus_tag="VFN38_14950"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HET9013122.1"
                     /translation="MTRTYPSRDATRPLSAVSADSSTAALELSVVMPCLNEADTLAVC
                     IDKARRAMDAHGIAGEVVVADNGSTDGSPDIARAHGARVVTVSERGYGAALMGGIAAA
                     HGTFVIMGDADDSYDFAEVPRILTKLREGFDLVQGCRLAAGGGQVMPGAMPFLHRWWG
                     NPMFSSMARLWFKAPIHDIHCGMRGFRRDAWRRLDQRCTGMEFASEMVIKASVHGFRI
                     AEVPIVLRPDGRANGRSHLRTFRDGWRHLRFFLMFSPRWLFLLPGMLLILLGIAGYAV
                     AMPGLSFGRVGFDVHTLLFASLAIICGYQAIVFAVFTKAFAINEGLLPADERMRMLFR
                     YVTLERGVLLGGISLLLGTILLLGAVMQWGAAHFGALDVRHTMRWAIPGMTLAVIGVQ
                     TVFSSFFLSILGMKRL"
     gene            complement(2916..3809)
                     /locus_tag="VFN38_14955"
     CDS             complement(2916..3809)
                     /locus_tag="VFN38_14955"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HET9013123.1"
                     /translation="MSSPRTPAHATVPVVSIGLPVYNGEATVAAAIESLLAQSFGDFE
                     LIISDNASTDATEAICRRLAAGDPRVRYVRQPGNRGPIANFEYVLAEARAALFMWAAS
                     DDRWEPEFLADNVRLLEREPAAVSSVSLVSQPSIAEPGTAPLRGGFVSKVRRLIRENA
                     GNSRYYGVWRTPVLREAMRRGSGHFIASDWAIIISACRHGDFVTTDRVLMTRGGRGAS
                     TAWRRQMALFGCRGIDRVLPLWAFTRWLARNLTPWELLRCLDVILLRNLSITVHYAIE
                     VAKQPRDPYRAHVPVLPPTRN"
     gene            complement(3806..>4088)
                     /locus_tag="VFN38_14960"
     CDS             complement(3806..>4088)
                     /locus_tag="VFN38_14960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013124.1"
                     /translation="VGYVTIGVTMMHRRLLRGAQRHWYDDTVVPLLAAAAAAGLARVA
                     FPWGATTAVPALLATVLGALLLAYTAATLATPAGRELIATLRVAGGRTA"
BASE COUNT          607 a         1414 c         1534 g          533 t
ORIGIN      
        1 accctcatcg catccggtcc gatggacccg cggtcggggg gcgcgctgct gctgcgggtc
       61 cccgacgacg acgtgcacgg cgcgctggat gccgtgcgcg acggcgaccc ctacgtcacc
      121 ttcggcgtcg cgcagtacga gctgatcccg tggggggtga acacggggcg cgaggcgctg
      181 gacgcgctgt agccggcggc gctaccgcgc cccggccagc gagagcacga gcagcgcggc
      241 ccactgcggc ccgagccatc cgttcgggcc gtactcgtac cactcgtcca gcccgtgcgc
      301 gccgcccccc ttgccgccgc cgtcgatggt gaggccgggc agccccatgc cgatcggcac
      361 gttggcatcg gtgctcgagg ccgagagctc ggccgtccag ccgaggacct tcgcggcgtc
      421 gctcgccacg cggacgatgc gcgccgtgtc gggctgggtg ccggcgggac ggatgcccac
      481 ggtgtcgacg gcgagcgtca gccggtcgct ggcccggggc cagcgggcgt tctccgcggc
      541 gagcgcgcga cgcagcgcgc gctgcacctg cgcgtccaga cgggccaggg acgccgcgga
      601 ctcggagcgc atgtccacgt ccatcgacgc ctcgaagggg atcgagttca ccgaggtgcc
      661 gccgcgcacg atgccgacgt tgaacgtcgt cttcggcgcc gtcggcaccc ggaggtcggc
      721 gatggcggcg atcgcgcggc ccagcgcgtg ggccgggttg ggattgccga aggcaccgta
      781 gctgtgcccc ccgcgtccct tgtacgtcac gcggtagcga tggctgccga cggcgcggct
      841 cgtgatcccg ccgccggtgc cgtccaccga gatgaagtag tcgatcttcc cggcgagctc
      901 cttgtcgaac aggtggcgcg tgccgcgcag gttgcccggc ccctcctcgc ccacgttgcc
      961 gacgaagacg atggttcccg gcgtccggac gtcggaggcc tggagggcgc gcgccgtggc
     1021 gagcaccacc gcgagcccgc gacagtcgtc gccgatgccg cggccggtga gccggccgtt
     1081 ctccttcttc acgcggacgt cggtcccctc ggggaacacg gtatcgaggt ggccggcgag
     1141 gacgacggtc gggcccgcgc ccgtgccgcg gcgctccccg agcacgttgc ccaccgcgtc
     1201 caccctcacg ttggtgaggc cgagcttctc gaacgccgcc ttgtaggcga ggccgcgggc
     1261 cgtctccatg aagggcggcg cggggatctc gcagagcgcg acctgctggt cgagcgtcca
     1321 ggcgttgtcc gcccggatcg cgtccagcac ggcacggacg tcggcgcggg cggcgagctg
     1381 cgccggggat tgcgcgcgga gaggcgagcc gagcgcggtc agcgcgaacg gaatgccggc
     1441 aaggacgtgg cgagcacgca tcgggtgcat ggatggtatg ggagggatgc gcgcgccagc
     1501 cggaaggcag cctagagccg cttcatcccg aggatgctga ggaagaagct ggagaatacc
     1561 gtctgcacac cgatcacggc gagggtcatg cccggaatgg cccagcgcat cgtatggcgg
     1621 acgtcgagcg ccccgaagtg cgccgctccc cactgcatca cggcgccgag caggagaatg
     1681 gtgccgagca gcagcgagat gccgccgagc aggacgccgc gctccagcgt cacgtagcga
     1741 aagagcatgc gcatgcgctc gtccgccggg agcagccctt cgttgatggc gaaggccttg
     1801 gtgaagacgg cgaagacgat ggcctggtag ccgcagatga tggcgaggct ggcgaacagc
     1861 agcgtgtgga cgtcgaaccc gacccggccg aacgagagcc cgggcatggc caccgcgtag
     1921 ccggcgatgc cgagcaggat gagcagcatc cccggcagca ggaagagcca tcgcgggctg
     1981 aacatcagga agaagcgcag gtgacgccac ccgtcgcgga aggtgcggag atgcgaccgt
     2041 ccattcgcgc ggccgtcggg gcggagcacg atcggcacct cggcgatcct gaagccatgg
     2101 accgacgcct tgatcaccat ctcggaggcg aactccatgc cggtgcagcg ctggtcgagc
     2161 cgtcgccagg cgtcgcgccg gaagccgcgc atcccgcagt ggatgtcgtg gatgggcgcc
     2221 ttgaaccaga gacgcgccat cgacgagaac atcgggtttc cccaccaccg gtggaggaag
     2281 ggcatcgcgc ccggcatcac ctggccgccc ccggcggcga ggcggcagcc ctgcacgagg
     2341 tcgaagcctt cgcgcagctt ggtgaggatg cgcgggacct ccgcgaagtc gtagctgtcg
     2401 tcggcgtcgc ccatgatgac gaaggtgccg tgcgccgcgg cgatgccccc catgagcgcg
     2461 gcgccatagc cccgttcgct caccgtgacg acacgggcgc cgtgtgcgcg ggcgatgtcg
     2521 ggcgagccgt ccgtgcttcc gttgtcggcg accaccacct cgcccgcgat gccgtgcgcg
     2581 tccatggcgc ggcgggcctt gtcgatgcag acggcgaggg tgtccgcctc gttgaggcag
     2641 ggcatcacca ccgagagctc gagggcggcg gtcgagctgt cggccgacac ggcgctcagc
     2701 ggtcgagtcg catcacggga cgggtaggtg cgcgtcatgg ccggccggtg acgtggggag
     2761 tgccgcgccg aggcatcggg cgggcggcga gcgagcaccg atggttcagg cggcgctgcg
     2821 ggctcaccca aagactggcg ccgatccgct tccgtaacag gagcgcacgc gacgcccgcc
     2881 cgcggcgcga cgggctgacg atggacggga cgcattcagt tgcgggtggg cggcagcacg
     2941 ggcacgtggg cgcggtacgg gtcgcgtggc tgcttcgcca cctcgatggc gtagtgcacc
     3001 gtgatgctga ggttgcgcag cagtatcacg tcgaggcagc ggaggagctc ccacggggtg
     3061 aggttgcggg cgagccaccg ggtgaaggcc cacaggggaa ggacgcggtc gatgccgcgg
     3121 cagccgaaga gcgccatctg gcggcgccac gccgtgctcg cgccccgtcc gccacgcgtc
     3181 atcaggaccc ggtcggtggt gacgaagtcg ccatgccggc aggcggaaat gatgatggcc
     3241 cagtccgagg cgatgaaatg cccggatccg cgtcgcatcg cctcgcgcag caccggagtg
     3301 cgccacacgc cgtagtagcg cgagttgccg gcgttctccc tgatcaggcg ccgcaccttc
     3361 gacacgaagc cgccccgcag cggcgccgtg cccggctcgg cgatgctcgg ctgcgagacg
     3421 aggctcacgc tgctcaccgc cgcgggctcg cgctccagca gtcgcacgtt gtccgcaagg
     3481 aactcgggct cccagcggtc gtcggatgcc gcccacatga acagcgcggc acgcgcctcg
     3541 gcgagcacgt actcgaagtt cgcgatcggg ccgcggttgc ccggctggcg gacgtagcgt
     3601 acgcgcgggt cgccggcggc cagccgccgg cagatcgcct cggtggcgtc ggtggacgcg
     3661 ttgtccgaga tgatcagctc gaagtcaccg aagctctgcg cgagcagcga ctcgatcgcc
     3721 gcggcgacgg tcgcctcgcc gttgtacacg gggagcccga tggagacgac gggcaccgtt
     3781 gcgtgggccg gtgtgcgcgg gctgctcatg cggtcctccc gccggccacg cggagggtcg
     3841 cgatcagctc acgtcccgcc ggggtcgcga gcgtcgccgc ggtgtaggca agcagcagcg
     3901 cgccgagcac ggtggcgagc agcgccggga ccgccgtcgt cgcgccccac gggaacgcca
     3961 cccgcgccag ccccgccgcc gccgcggcag cgagcagcgg cacgacggtg tcgtcgtacc
     4021 agtgccgctg cgcgccgcgc agcagccgac gatgcatcat ggtgaccccg atcgtgacgt
     4081 acccgacg
//
LOCUS       DASSYW010000947         2620 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1502053, whole genome shotgun sequence.
ACCESSION   DASSYW010000947 DASSYW010000000
VERSION     DASSYW010000947.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2620)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2620)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2620
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1502053"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1627
                     /locus_tag="VFN38_14965"
     CDS             <1..1627
                     /locus_tag="VFN38_14965"
                     /inference="COORDINATES: protein motif:HMM:NF018884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GAF domain-containing SpoIIE family protein
                     phosphatase"
                     /protein_id="HET9013125.1"
                     /translation="KKQELRIAYAVGYPEAALPNMRLRVGQGVVGAAVEEGRPILVND
                     IRQEPRYMGPLRNMLSQLAVPMRRKGKVIGALNLLNETEGAFTYQDEALLRQFAAHVA
                     VAIENARLFRSERQYVDTLETLAEIGREMSSILDLDALLTRIASLTKRLVDYRTFGIL
                     LLNETSQELEMKLAVRYGKGAESKHVRLGEGLVGWSALHREAVLVSDVSKDPRYINLV
                     DDARSELVIPMLIKDRCIGVFDLESPELDAFTKEHKELLTLLASQAAVAIDNARLYEE
                     VRRNEERIEKELRFAQRVQMALLPTELPRPLDDVDVAARIEPARELGGDLYDFLMPDP
                     RTLAVAVGDVSGKGAPAALYGGFVAELVRSRTMRRRFSPDLFRVAGVLQAMNTILHER
                     QLEEYYCTLCYAFFDLDRRVVTLANSGLPYPIFCRADQCSQIELPGVPLGSFAGVTYD
                     EMELELRPGDLLVFCTDGIFESPDERGSEFGARRACEVVERHRNDPVQMIVDRMFEAV
                     MTFRGGAAQTDDMTVVAVRFNGSGAENREPGAS"
     gene            complement(1624..1977)
                     /locus_tag="VFN38_14970"
     CDS             complement(1624..1977)
                     /locus_tag="VFN38_14970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013126.1"
                     /translation="MTRTSALALALVSALWVTGCASSVRIAEIKTDPGRYDHKTVAVR
                     GTVTSTYGVALVPFQYYNVDDGTGEIAVLSRSSRSMPAKGAQVEVKGRVGEVASFGGR
                     SIGLHIEEESRKAKY"
     gene            complement(2322..>2620)
                     /locus_tag="VFN38_14975"
     CDS             complement(2322..>2620)
                     /locus_tag="VFN38_14975"
                     /inference="COORDINATES: protein motif:HMM:NF012348.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HET9013127.1"
                     /translation="LAVMLRAGLDGVVLGLDPGPPVNKYIYKMSHRERRHLRIDELPG
                     NLSEAIDELEKSALMKDTLGEHIFDHFITAKRTEWDSYIRQVSPWEIERYLNTY"
BASE COUNT          425 a          856 c          898 g          441 t
ORIGIN      
        1 gaagaagcag gagctgcgca tcgcctacgc ggtcggctat cccgaggcgg cgctgccgaa
       61 catgcgcctc cgcgtggggc agggcgtcgt gggtgcggcc gtcgaagagg gccggccgat
      121 cctggtgaac gacatccgtc aggagccgcg ctacatgggc ccgctgcgca acatgctgtc
      181 gcagctcgcg gtgccgatgc gccgcaaggg caaggtgatc ggcgcgctca acctgctgaa
      241 cgaaacggag ggtgcgttca cctaccagga cgaggcgctg ctgcggcagt tcgcggcgca
      301 cgtcgccgtg gcgatcgaga acgcgaggct gtttcgatcg gagcggcagt acgtagacac
      361 gctcgagacg ctggccgaga tcggccgcga gatgtcgtcg attctcgacc tcgacgcgct
      421 gctgacgcgc atcgccagcc tgaccaagcg cctggtggac taccgcacct tcggcatcct
      481 gctcctgaac gagacgagcc aggagctcga gatgaagctg gcggtgcgct acggcaaggg
      541 ggcggagtcg aagcacgtgc ggctcggcga gggtctggtg ggctggtcgg cgctccatcg
      601 cgaggcggtg ctggtgtccg acgtctcgaa ggatccccgc tacatcaacc tcgtggacga
      661 cgcgcggtcc gagctcgtga tcccgatgct catcaaggat cggtgcatcg gcgtcttcga
      721 cctcgagagc cccgagctcg acgcgttcac caaggagcac aaggagctgc tgacgctgct
      781 ggcgagccag gccgccgtgg cgatcgacaa cgcccgcctc tacgaagaag tgcggcgcaa
      841 cgaagagcgc atcgagaagg agctccgctt cgcgcagcgc gtgcagatgg cgctgctgcc
      901 cacggagctg ccgcggcccc tcgacgacgt ggacgtggcc gcccgcatcg agccggcgcg
      961 cgagctgggg ggcgacctct acgacttcct gatgcccgat ccgcgcacgc tggccgtcgc
     1021 ggtcggcgac gtgtcgggca agggggctcc ggcggcgctc tacggcggct tcgtcgccga
     1081 gctcgtgcga tcgcgcacga tgcggcggcg cttctcaccg gatctgtttc gcgtggcggg
     1141 cgtgctgcag gcgatgaaca cgatcctgca cgagcggcag ctcgaggagt actactgcac
     1201 gctctgctac gcgttcttcg atctcgaccg gcgcgtcgtg acgctggcca actcggggct
     1261 gccgtatccg atcttctgcc gcgccgatca gtgctcgcag atcgagttgc ccggcgtgcc
     1321 gctcgggtcg tttgccggcg tcacctatga cgagatggag ctcgagctgc ggccgggtga
     1381 cctgctggtg ttctgcacgg acggcatctt cgagagcccg gacgagcgcg gttcggaatt
     1441 cggcgcgcgg cgtgcgtgcg aagtggtgga gcgccaccgc aacgatccgg tccagatgat
     1501 cgtggaccgg atgttcgaag cggtcatgac cttccgcggt ggcgccgctc agaccgacga
     1561 catgaccgtc gtggcggtgc gcttcaacgg ttcgggagcc gagaaccggg agccgggagc
     1621 ttcttagtac ttcgccttcc ggctctcttc ctcgatgtgc aggccgatgc tgcggccgcc
     1681 gaacgaggcc acctcgccga cgcggccctt cacctcgacc tgcgcgccct tggccggcat
     1741 gctgcgcgag ctgcgcgaca gcacggcaat ctcgcccgtg ccgtcgtcca cgttgtagta
     1801 ctggaacggg acgagcgcca caccataggt cgacgtcacg gtaccgcgga cggccaccgt
     1861 cttgtgatcg taccgccccg gatccgtctt gatttcggcg atgcgcaccg acgacgcaca
     1921 tccggtcacc cacagggcgc tcacgagcgc cagcgccaac gcggaagttc tcgtcatgat
     1981 gttcactcct cgctgcgtcc ggggggatgg aaggcagcga tttctaatgg tcgcgcacgg
     2041 cccgtgaagg tgctcagccg gggcacggcg atgccagcgc ctgcctgaag gttacgtgcc
     2101 ccggtggtcc ggcgcgaccg cagagggaca atcaaagagc gtgcccggcg aaaagcctcg
     2161 aattcacgcc caatttccgc gctgaggcgg cagacgcgga cggggcgtca cctcgaggcg
     2221 tcagaacagg tacgacgggt aggacaggta ggacgggtag gacaggtgag acgggtggaa
     2281 tgtctcctta cctgtcccac ctgtctcacc cgtcccacct gtcaataagt attcaggtat
     2341 ctctcgatct cccacggcga cacctggcgg atgtagctgt cccactcggt gcgcttggcc
     2401 gtgatgaagt gatcgaagat gtgctcgccg agcgtatcct tcatgagcgc gctcttctcg
     2461 agctcgtcga tcgcttcgct caggttgccc ggcagctcgt cgatgcgcag gtgccgccgc
     2521 tcgcggtggc tcatcttgta gatgtacttg ttcaccggcg gccccgggtc gagccccagc
     2581 accacgccgt cgagcccggc gcgcaacatc acggccagcg
//
LOCUS       DASSYW010000948         4444 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_885971, whole genome shotgun sequence.
ACCESSION   DASSYW010000948 DASSYW010000000
VERSION     DASSYW010000948.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4444)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4444)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4444
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_885971"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..380)
                     /locus_tag="VFN38_14980"
     CDS             complement(<1..380)
                     /locus_tag="VFN38_14980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013128.1"
                     /translation="MRQMTVCLVVVVSLFAAGEAGAQDNWPPPSPPPLTDFGTKDFFF
                     GRPKATVGVRGNWLFARAKSDWYSFVTDQLLVDKKDFNAPGIATDVGFAVSRRAEAVF
                     GVEFNQAKKDSEYRDFVDNNRLPIT"
     gene            529..1287
                     /locus_tag="VFN38_14985"
     CDS             529..1287
                     /locus_tag="VFN38_14985"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HET9013129.1"
                     /translation="MHQLLVFGSAFGAGMINSVAGGGTLLSFPTLIWLGVPSVAANAT
                     STVALWPGTLGSVWGYRREMRQADRSLWALAVPSLVGGLIGAFLLARTPTDVFDRLVP
                     LLILFATCLLAAQEAIQRRFDLSAIHTSSRSPWLSWAMLFQAGVGLYGGYFGAGIGIL
                     MLAALSLMGQTDIQRMIAVKNTLAVCINGIAAVYFAISGLVLWEDAAVMAAGAIVGGV
                     GGAGLARRMGRTVVRRIIIAIGFGMALALLVKAL"
     gene            1290..2228
                     /gene="coaA"
                     /locus_tag="VFN38_14990"
     CDS             1290..2228
                     /gene="coaA"
                     /locus_tag="VFN38_14990"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: protein motif:HMM:TIGR00554.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004594 - pantothenate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I pantothenate kinase"
                     /protein_id="HET9013130.1"
                     /translation="MATVSRFMEFSRAQWAALRDSTPLPLTESQLRGLVGLNEWMSLD
                     EVADIYLPLSRLLNLYVGAVQNLHRATATFVRSDSPRVPYVIGLAGSVAVGKSTTSRV
                     LQALLSSWPSHPKVDLVTTDGFLRPLRELESRGMTQRKGFPESYDLRRLVQFMADVKS
                     GVPEVSAPVYSHLAYDIVAGEQQVIRAPDIVIVEGLNVLQTGSGRAGQPMPSFVSDFF
                     DFSIYVDAAEADIEQWYVERFLKLRDTVFRDPSSYFHRYASLSPDEAAETARGIWSTI
                     NAVNLRVNVMPTRERAHVILEKGRDHAVRRVRLRKL"
     gene            complement(2340..3893)
                     /locus_tag="VFN38_14995"
     CDS             complement(2340..3893)
                     /locus_tag="VFN38_14995"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HET9013131.1"
                     /translation="MQLYSVVVAGSAATCATLYAATGRVWLLPLAAALVYLTLKSYRI
                     YRDQVAADQRHHEEMMRLHREAVAALEAARQSEQRYARAARHDDLTALPNRRLFAEML
                     QRSMARAARAAEPRYAVLFVDLDGFKLVNDSLGHLVGDQFLVAISSRLQTQLRPSDVL
                     SRLGGDEFAVLIEGYTSHDEVCAITERLQRSLRDPIRLSGRELYASASIGVVMGGPHY
                     ETVDDLLRDADIAMYRAKAAGRGGYQIFDPHMHASAVERLMLETELRHAVERHDFTLV
                     YQPIVELPSSEICGLEAFVRWTRPDGRVIGPADFIPVAEETGLIVPLTYSVLGDACGQ
                     AAAWQRMFGQPLGISVNISSRLFARPDFVDEVERAVDVSGLLPGTLRLEITENTLLNS
                     SDVVHDNFERLRRLHVRVYLDDFGTGYSSLSSLQRYPVDALKLDRSFVAQMGGPDHGC
                     AIGSAIVKLAHELGMGLIAEGVETLAHAEQLLALGCPHAQGHLFSEPRTTEATEVLLA
                     RAFERVRAS"
BASE COUNT          699 a         1486 c         1528 g          731 t
ORIGIN      
        1 gtgatcggca gccggttgtt gtcgacgaag tcccgatact cggaatcctt cttcgcctgg
       61 ttgaactcca cgccgaacac cgcttcggcg cgccgcgaga cggcaaagcc gacgtcggtg
      121 gcaatgccgg gcgcgttgaa gtccttcttg tccaccagca gctggtcggt gacgaacgag
      181 taccaatcgc tcttcgcccg cgcgaagagc cagttgcccc ggacgccgac cgtggccttc
      241 gggcgcccga agaagaagtc tttcgtgccg aagtccgtga gcggtggtgg cgacggcggc
      301 ggccaattgt cctgggcccc tgcctcgcct gccgcgaaca ggctcactac tacgaccagg
      361 cacactgtca tctgacgcat gctgccccct gctgatagta gcttctggcc cctgagggca
      421 aaggccgcgc cagcacggct gtcaggatcg cctaggaatc tcgcacgtgc cgcggccgcc
      481 gccgaggcgc ctgtccgcga caggcgacag agtatgcttc cgaatcaggt gcatcagctg
      541 ctggtgttcg ggtcggcctt cggcgccggg atgatcaact ccgtggccgg cggcggcacg
      601 ctgctgtcgt ttccgaccct catctggctc ggcgttccgt cggtggccgc caacgccacg
      661 agcacggtgg ccctctggcc ggggacgctc ggcagtgtct ggggttaccg ccgcgaaatg
      721 cgccaagcgg atcggagcct gtgggcgctg gccgtgccca gcctcgtggg cggactgatc
      781 ggcgccttcc tgttggcccg tactccaacc gatgtcttcg atcgcctggt gccgctgctg
      841 atcctgttcg ccacctgcct gctcgccgcg caggaggcga tccagcggcg tttcgatctg
      901 tcggccatcc ataccagcag ccgctcgccg tggctctcgt gggccatgct gtttcaggca
      961 ggcgtcggcc tctatggcgg ctactttggc gcgggcatcg gtatcctcat gctggccgcg
     1021 ctcagcctga tggggcagac ggacatccag cgcatgatcg ccgtcaagaa cacgctggcg
     1081 gtgtgcatca acggcatcgc cgccgtctac ttcgccatca gcggcctggt gctctgggaa
     1141 gacgccgcgg tgatggccgc gggagcgatt gtcggcggcg tcggcggcgc cgggctggcg
     1201 cgccgcatgg gccgcaccgt cgtgcggcgc atcatcatcg cgatcggatt cgggatggcg
     1261 ctcgcgctgc tggtgaaggc gctgtgaccg tggccaccgt ctcgcgcttc atggagttca
     1321 gccgcgcgca gtgggcggcg ctgcgcgact ccacgccgct gccgctcacc gagtcgcagc
     1381 tgcgcggcct cgtcggcctc aacgagtgga tgtcgctcga cgaggtggcc gacatctacc
     1441 tgccgctctc gcggctgctg aacctgtacg tcggcgccgt ccagaacctg caccgcgcca
     1501 ctgccacctt cgtccggtcc gacagtccgc gcgtgcccta cgtgattggc ctggcgggca
     1561 gcgtcgcggt ggggaagagc accacgtcgc gcgtgctgca ggcgctgctt tcgagctggc
     1621 cgagccaccc gaaggtcgat ctcgtgacga ccgacggctt cctgcgtccg ctgcgcgagc
     1681 tcgaatcgcg cgggatgacg cagcgcaagg gctttcccga gagctacgac ctgcggcggc
     1741 tcgtgcagtt catggcggac gtgaagtcgg gcgtgcccga ggtgtcggcg cccgtgtact
     1801 cgcacctggc ctacgacatc gtggccggcg agcagcaggt gatccgcgca cccgacatcg
     1861 tgatcgtcga agggctgaac gtgctgcaga ccggcagcgg gcgcgcgggg cagccgatgc
     1921 cgagcttcgt gtcggacttc ttcgacttct cgatctacgt ggacgccgcg gaagccgaca
     1981 tcgagcagtg gtatgtggag cgcttcctca agctgcgcga caccgtgttt cgcgacccgt
     2041 cgtcgtattt ccaccgctat gcatcgctgt cacccgacga ggccgccgag acggcgcgcg
     2101 gcatctggtc caccatcaac gcggtgaacc tgcgggtgaa cgtgatgccg acgcgggagc
     2161 gcgcccacgt gatcctggag aaggggcgcg accacgcggt cagacgtgtc cgtcttcgca
     2221 agttgtaggc ggacacgtgg aattgctgac aacggacctc ggacttagga ccagggacgg
     2281 accaagaacg aaggaccaag aaccaaggac aaagcggcta ctgagaatcg acagccgcgc
     2341 taagaagctc tgacgcgctc gaaggcgcgg gccagcagga cttcggtggc ctcggtggtg
     2401 cgcggttccg agaacaggtg cccttgcgcg tgcgggcagc cgagcgccag cagctgttcg
     2461 gcgtgcgcca gcgtttcgac cccttcggca atcagcccca tgcccagctc gtgcgccagc
     2521 ttcacgatgg cgctgccgat ggcgcagccg tggtccggcc cgcccatctg cgccacgaac
     2581 gatcgatcca gcttgagcgc gtccaccggg tagcgctgca gcgagctgag cgacgagtag
     2641 ccggtgccga agtcgtcgag gtacacccgg acgtgcagcc gccgcagccg ctcgaagttg
     2701 tcgtgcacga cgtcggacga gttgagcagc gtgttctccg taatctcgag ccgcagcgtg
     2761 cccggcagca gaccgctcac gtccaccgcg cgttcgacct cgtccacgaa gtcggggcgc
     2821 gcgaagaggc gcgacgagat gttcaccgag atgccgagcg gctggccgaa catccgctgc
     2881 cacgccgccg cctggccgca ggcgtcgccc agcaccgaat aggtgagcgg cacgatgagg
     2941 ccggtttctt ccgcgaccgg gatgaagtcc gccggaccga tcacgcgacc gtcggggcgc
     3001 gtccaccgga cgaacgcttc gaggccgcag atctccgacg agggcagctc gacgatcggc
     3061 tggtagacga gggtgaagtc gtggcgctcg acggcgtggc gcagctcggt ttcgagcatg
     3121 aggcgctcca ccgccgaggc gtgcatgtgc gggtcgaaga tctggtagcc gccgcggccg
     3181 gccgccttgg cgcgatacat ggcgatgtcg gcgtcgcgca gcaggtcgtc caccgtctcg
     3241 tagtgcggtc cgcccatgac cacgccgatg ctggccgacg cgtagagctc gcgccctgac
     3301 aggcggatcg gatcgcgcag cgagcgctgc agccgctcgg tgatcgcgca gacctcgtcg
     3361 tgcgacgtgt agccctcgat gagcaccgcg aactcgtcgc cgcccaggcg cgacagcacg
     3421 tcgctcgggc ggagctgcgt ctgcagacgc gacgagatgg ccaccaggaa ctgatcgccc
     3481 acgaggtggc cgaggctgtc gttgaccagc ttgaagccgt cgaggtcgac gaacagcacc
     3541 gcgtagcgcg gctcggcggc tcgcgcggcg cgcgccatcg atcgctgcag catctcggcg
     3601 aacagccggc ggttgggcag cgccgtcagg tcgtcgtgac gggcggcccg cgcatagcgc
     3661 tgctccgact gccgcgcggc ctcgagcgcc gccaccgctt cgcggtgcag ccgcatcatc
     3721 tcttcgtgat ggcgctgatc cgccgccacc tggtcgcggt agatgcgata cgacttgagc
     3781 gtcagataga cgagcgccgc cgcgagcggc agcagccaca cgcgtcccgt ggcggcgtag
     3841 agcgtcgcgc acgtggccgc gctgcccgcc acgacgacgc tgtacaactg catgcgcgcg
     3901 ccgcgagggg cctcgggaga ttcctgggtc gcagagtcgc tcgtgcgcgg ctccgccaga
     3961 gtagacattg ggtcttcgtt cagcaatcac gaagccagcc gttgcgatta cgcttctgtg
     4021 agaggaggac ctaactcgat gtaacggcga ggttccatgg cggttgcccg aaccacgaac
     4081 ccgtcagatt ctctgaggaa gtcagacctc tgggactacc ttgggcagag tgggcggaga
     4141 gggcagagag gggatcagcg aagattgccg gtgcgcaccg atcagcttct tcttcgtcgt
     4201 cgatcgggtc cggctggagc gcgatcagct cgagctccaa cccaaacagc cacgcgttca
     4261 caccggtgag gacgagggcg cctactccgc cctctgcgcg agccaagtgg ccagcgcgcg
     4321 gaaggcgtgg ccgcgatgcg cgacggcgag cttgtcgggc tcgctcactt cggcgagcgt
     4381 cttgccgaac ggcgggtatt cgaagatcgg gtcgtagccg aatcccgcgc cgcctttcgc
     4441 gtcg
//
LOCUS       DASSYW010000949         2398 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_525336, whole genome shotgun sequence.
ACCESSION   DASSYW010000949 DASSYW010000000
VERSION     DASSYW010000949.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2398)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2398)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2398
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_525336"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..795
                     /locus_tag="VFN38_15000"
     CDS             <1..795
                     /locus_tag="VFN38_15000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013132.1"
                     /translation="GTPAAGVTVTFTPTSGAGQSFGPASGVTDVNGEARATWTLGPTL
                     GIYAATVSAPGLGSRTIIATANRLAPDVGMFTGGAAKVPGGTAPSVGNQAVLVYSGPA
                     SGEVPLDAGGSFATPVLPVGTYTVSVVSKSGAFPTTTLYGATLADGEVVSLGTIPIAY
                     PGSGAVQIAIHGCPQVGDANGTATVRLYNGINGDQGGSVAATWTMPLGSVRTQAGVAY
                     GIYTLTITTQANDPTKSCATYRATLPHSFTTPNGTTTIPLVILGNP"
     gene            810..1502
                     /locus_tag="VFN38_15005"
     CDS             810..1502
                     /locus_tag="VFN38_15005"
                     /inference="COORDINATES: protein motif:HMM:NF024852.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HET9013133.1"
                     /translation="MTESRQTAVITGASRGIGRAIALRLAATYHVVALARTKRELDSL
                     AAEMQSHGGSCDGIELNVADAAAVARALDGVRADVLVNNAGVGFLKPMLELTPDEWQT
                     MVDVNFNALFHVTRAVLPGMVARGRGHIVMIGSIAGRSAFVGGTCYAATKHAVMAFSE
                     SLMLEVRDRGVKVSVVNPGSVATSFSTRERDTSWMLTADDVADAVVDAIDTPPRVLVH
                     RIEVRAAMPKKG"
     gene            complement(1503..>2398)
                     /locus_tag="VFN38_15010"
     CDS             complement(1503..>2398)
                     /locus_tag="VFN38_15010"
                     /inference="COORDINATES: protein motif:HMM:NF014427.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HET9013134.1"
                     /translation="VVVPPHVAAIEIDAPAEVRSGSRATLFARTVDRHGNAIDAAIIW
                     TSRNQSVAAITDQGTLLAKRRGSAVIVAESGGVARAITVTITAAPVVDIVIDGVPAVL
                     VVGATALSRAIVRGGRSTDDDRSRAVEWKSSDPAIATIAADGTLTARSPGQATITATS
                     DGVRGEARVTVVSVRAHSIVVAPLPSPLRLGDKASLKATVCDADGKTVNRPVTWRSSD
                     PRVAAVQGDGRLAAVGEGWAIVTAEADGVEAHVEAVVRQQIVPVSTAGRRESRRLALN
                     WWLLLAVLAGTIALGWHFLVR"
BASE COUNT          380 a          813 c          847 g          358 t
ORIGIN      
        1 ggcacgccgg cggcgggcgt cacggtcacg ttcaccccga cgtccggcgc cggccagtcg
       61 ttcggtccgg ccagcggagt caccgatgtg aacggagagg cccgtgcgac gtggacgctc
      121 ggtccgacgt taggcatcta cgcggccacg gtgtcggcgc cggggctcgg ctcacgcacg
      181 atcatcgcga cggcgaaccg cctggcgcct gacgttggca tgttcaccgg cggcgccgcg
      241 aaggtgccgg gcggcacggc gccgagcgtc gggaaccagg ccgtgctcgt ctattcggga
      301 ccagccagcg gcgaggttcc actcgacgcg ggtgggagct tcgcgacgcc cgtacttccg
      361 gttggcacgt acacggtctc ggtcgtctcg aaatccggag cgttcccgac gacgacgctg
      421 tacggcgcga cgctcgcgga cggtgaggtc gtctccctcg gtacgatccc gatcgcctat
      481 cccggcagcg gcgcagtgca aatcgcgata cacgggtgcc cgcaggtcgg agacgcgaac
      541 ggcacggcaa ccgtgcggct gtacaacgga atcaacggcg atcagggtgg gagcgtcgca
      601 gcgacgtgga ccatgcccct cgggtcggtc aggacacagg ctggtgtggc ttacgggatc
      661 tacacgctga cgatcacgac gcaggcgaac gatccgacga agtcgtgtgc cacttaccgg
      721 gccacgctcc cgcactcatt tacgacgccc aatggaacga ctacgattcc gctcgtcatc
      781 ctcggcaatc cctgatcccg tgtgatcgca tgacggagag tcggcagacg gcagtcatca
      841 ccggcgcgtc ccgaggaatc ggacgcgcca ttgcattacg gctcgccgcg acctaccacg
      901 tggtcgcgct cgcgcgcacg aagcgcgagc tcgactcgct cgccgccgaa atgcagtcgc
      961 acggaggctc gtgcgatggg atcgagctga acgtcgcgga cgcggccgcg gtcgctcgcg
     1021 cgctcgacgg tgtgcgcgcc gacgtgctcg tcaacaacgc cggcgtcggg ttcctcaagc
     1081 cgatgctcga gctcacgcct gacgagtggc agacgatggt ggatgtgaac ttcaacgccc
     1141 tgtttcacgt tacgcgggcc gtcctcccgg gcatggtggc ccgtggacgt ggccacatcg
     1201 tgatgatcgg gtcgatcgcc gggcgcagcg cgttcgtggg cgggacgtgc tacgccgcga
     1261 cgaagcatgc cgtgatggcg ttcagcgaat cgctcatgct cgaggttcgc gacaggggcg
     1321 tgaaggtgag cgtcgtgaac ccgggatccg tggcgacgag cttctcgacg cgagagcgcg
     1381 acacgagctg gatgctcacc gcggacgacg tcgcggacgc ggttgtcgac gcgatcgaca
     1441 cgccgccgcg tgtgctggtg caccggatcg aagtgcgggc ggcgatgccg aagaagggct
     1501 gatcagcgca cgaggaagtg ccagccgagc gcaatggtgc cggcgaggac cgcgaggagg
     1561 agccaccagt tcagcgcgag gcgacgcgac tcgcgtcgcc cggccgtcga cacgggcacg
     1621 atctgctgcc taacgacggc ctcgacgtgc gcctcgacgc cgtccgcctc cgcggtcacg
     1681 atcgcccacc cctcgccgac tgcggccagg cgtccgtcgc cctggacggc agcgacgcgc
     1741 gggtcgctcg accgccatgt caccgggcga ttcaccgtct tgccatccgc atcgcacacg
     1801 gtggccttga gtgaggcctt gtcgccaagc cggagtggcg acggcagtgg agcgacgacg
     1861 atggagtggg cccgaacgct caccacggtc actcgcgcct caccgcgaac gccatccgac
     1921 gtcgcggtga tggtcgcctg gccggggctg cgggccgtga gtgtgccgtc ggcggcgatc
     1981 gtcgcgatgg cggggtcgct cgacttccac tcgacggcgc gcgaccgatc gtcgtcggtc
     2041 gaccgacccc ccctaacgat tgcacgcgac agcgcggtcg cgccgacgac gagcacggcg
     2101 ggcacgccgt cgatgacgat gtccacgacc ggggccgccg tgatggtcac cgtgatggcg
     2161 cgcgcaacgc ctcccgactc ggccacgatg acggcggaac cgcgccgctt cgcgaggagc
     2221 gtcccttggt ccgtgatggc tgcgaccgac tggttgcgcg acgtccagat gattgctgcg
     2281 tcgatcgcgt tcccgtggcg gtccaccgtg cgcgcgaaca gcgtcgcgcg cgagcccgat
     2341 cgaacttccg cgggcgcatc gatctcgatg gctgcgacgt gcggcggtac cacgacga
//
LOCUS       DASSYW010000950         2264 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_901983, whole genome shotgun sequence.
ACCESSION   DASSYW010000950 DASSYW010000000
VERSION     DASSYW010000950.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2264)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2264)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2264
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_901983"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(56..1471)
                     /gene="lpdA"
                     /locus_tag="VFN38_15015"
     CDS             complement(56..1471)
                     /gene="lpdA"
                     /locus_tag="VFN38_15015"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004148 - dihydrolipoyl dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA];
                     GO_process: GO:0051068 - dihydrolipoamide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HET9013135.1"
                     /translation="MAETHIPADVVVIGGGPGGYVAAIRAAQLGFTTVCVESDRTLGG
                     TCVNVGCIPSKALLESSHHFEFISHDAKKHGIGVSAPTIDVAAMLKRKDDVVGANTKG
                     IEFLFRKNKVLWAKGAGTLKAGNVVEVRGAPPENSVTSYQAKHVIIATGSVPIELPFL
                     KFDEERVLSNVGALTIPKVPGHLIVVGGGVIGLELGSVWRRLGAKVTVVELLPAILPG
                     TDDEVVKEADKAFRKQGLDIRTGTRVVNGGRTDAGVFIEVEKDGTTERIEGDHVLVSV
                     GRRPATAGIDVQALGINVGKRGEILVDDQQRTNLPNVYAIGDCTPGPMLAHKAEEEGV
                     VAAEVIAGKPVHTHHRTVPGVVYTWPEIAVVGLTEKQAKESGREIKVGKFPFSANGRA
                     RTAGESTGFVKFVADATTDEILGCHMIGPNVSELIPEVVLAMEYRGSSEDIGITVHAH
                     PTLSETTKEAALAVLGRAIPI"
     gene            1641..2243
                     /locus_tag="VFN38_15020"
     CDS             1641..2243
                     /locus_tag="VFN38_15020"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HET9013136.1"
                     /translation="MITLAPITLEGHGLRLEPLAPAHEAALATAAADGRLWELWYTSV
                     PAPDAIATYVADALAGLGTGVMLPWAVRDLASGDIAGSTRYHDIVAPIDRVEIGYTWY
                     GARWQRSHVNTAAKLLLLTHAFEAVGCAVVGLRTDNFNFRSQRAIEALGAKRDGVLRH
                     HQARRDGTVRDSVMYSILAAEWRDVKRHLALRLARGRASA"
BASE COUNT          306 a          791 c          797 g          370 t
ORIGIN      
        1 cgtcgcggcg gcggcgagcg cgccggcgcg cagcaggtcg cgccggtgca tggcgctaga
       61 tggggatcgc gcggccgagg accgcgagcg ccgcttcctt ggtcgtttcg gagagcgtgg
      121 ggtgcgcgtg cacggtgatc ccgatgtcct ccgacgagcc gcggtactcc atggcgagca
      181 ccacctccgg gatcagctcc gacacgttgg ggccgatcat gtggcagccg aggatctcgt
      241 cggtcgtggc gtcggcgacg aacttgacga agccggtgga ctcgccggcg gtgcgcgcgc
      301 ggccgttggc ggagaagggg aacttgccga ccttgatctc gcggccgctc tccttcgcct
      361 gcttctccgt cagcccgacg acggcgatct cgggccaggt gtagacgacg cccggcacgg
      421 tgcgatgatg ggtgtgcacc ggcttgccgg cgatcacctc ggccgcgacg acgccttcct
      481 cctcggcctt gtgcgcgagc atggggccgg gggtgcagtc gccgatggcg tagacgttgg
      541 ggaggttggt gcgctgctgg tcgtcgacga ggatctcgcc gcgcttgccg acgttgatgc
      601 cgagcgcctg gacgtcgatg ccggcggtgg cggggcggcg tccgacggag acgaggacgt
      661 ggtcgccctc gatgcgctcg gtggtgccgt ccttctcgac ctcgatgaag acgccggcgt
      721 cggtgcggcc gccgttgacg accctggtgc cggtgcggat gtcgaggccc tgcttgcgga
      781 aggccttgtc ggcttccttg acgacctcgt cgtcggtgcc ggggaggatg gcggggagga
      841 gctcgacgac ggtgaccttg gcgccgaggc ggcgccagac ggagccgagc tcgaggccga
      901 tcacgccgcc gccgacgacg atgaggtggc cggggacctt tgggatggtg agggcgccga
      961 cgttggagag gacgcgctct tcgtcgaatt tcaggaaggg gagctcgatt ggtacggagc
     1021 cggtggcgat gatgacgtgc ttcgcctggt aggacgttac actgttttcg gggggggccc
     1081 cccggacctc gaccacgttt ccggccttca gagtgccagc cccctttgcc cataagacct
     1141 tgttcttccg gaacaggaac tcgatcccct tcgtgttcgc ccccaccacg tcgtccttcc
     1201 gcttcagcat cgccgccacg tcgatcgtcg gcgccgacac cccgatgccg tgcttcttcg
     1261 cgtcgtgcga gatgaactcg aaatggtgcg acgactccag cagcgccttg ctcggaatgc
     1321 atcccacgtt cacgcaggtg ccccccagcg tgcggtcgct ctccacacac accgtggtga
     1381 agccgagctg cgccgcgcgg atcgcggcga cgtagccgcc aggtccgccg ccgatcacga
     1441 cgacatcggc ggggatgtga gtctctgcca tgtgggttcg aaccgtctcg tggtgtgatg
     1501 aagttgtccc gaaaggtagc ccggagttcc cggcgcgggc agccacgcgc gcgcgacgag
     1561 cgccctcgcg ccggctggcg tcacggcgac ccgcgcacga ccttccgtcg ctcgcgtcct
     1621 caccgccgat tccccgcgtc atgatcaccc tcgcccccat cacgctcgaa ggccacgggc
     1681 tccgcctcga gcccctcgcg cctgcgcacg aagccgctct cgccaccgca gcggcggacg
     1741 gccggctctg ggagctgtgg tacacctcgg tccccgcacc cgacgcgatc gccacctacg
     1801 tcgccgacgc gctcgcgggg ctgggcacgg gagtgatgct cccgtgggcg gtgcgcgacc
     1861 tggccagtgg ggacatcgcc ggcagcacgc gctatcacga catcgtcgcg ccgatcgatc
     1921 gcgtcgagat cggctacacc tggtacggcg cccgctggca gcgcagccac gtcaacaccg
     1981 cggccaagct gctgctcctg acccacgcct tcgaggccgt cgggtgcgcc gtcgtcggac
     2041 tgcggacgga caacttcaac ttccgctcgc agcgcgccat cgaggcgctc ggcgccaagc
     2101 gcgacggcgt gctgcgccat catcaggctc ggcgcgacgg caccgtccgc gacagcgtca
     2161 tgtacagcat cctcgccgcc gagtggcgcg acgtgaagcg ccacctcgca ctccggctgg
     2221 cgcgcggccg cgcctccgcc tgagtcgccg cgcgtgctca gtcg
//
LOCUS       DASSYW010000951         2090 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_709256, whole genome shotgun sequence.
ACCESSION   DASSYW010000951 DASSYW010000000
VERSION     DASSYW010000951.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2090)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2090)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2090
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_709256"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(248..1150)
                     /locus_tag="VFN38_15025"
     CDS             complement(248..1150)
                     /locus_tag="VFN38_15025"
                     /inference="COORDINATES: protein motif:HMM:NF017373.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013137.1"
                     /translation="MFQLTVPPADSIVTDTLLDSVAALRAATAPVRALSSQAGTVGDT
                     FADRMMASLAQVAEFVPAMLGAIVILFAGYLLAKLVEKGTDRFLRRVQLNRMLERGGV
                     LQVVERSGAHVNPTRVIANLFFWMVMFTVMLVAANALRLEALAEVFSELVGYIPSVIA
                     ALVIVLVGIVLGGFVGGLIMASAGGIHGGPTLARVGRGGVIVLAVFMALQQLGVATEL
                     VTTAFAILFGAVALALALSFGLGNRELAGEVTREWYERYRAEREAIDRGAAAAEMADQ
                     LDDEESAEDAAEHDPAPLRPSRHR"
     gene            complement(1262..>2090)
                     /locus_tag="VFN38_15030"
     CDS             complement(1262..>2090)
                     /locus_tag="VFN38_15030"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HET9013138.1"
                     /translation="LAAGYPLTVWNRTAERTGALGERGATVADSPAAAARGARFVVLM
                     LTDPAALDAVLRGDEGVLAALAPGATVIDCSTVGPADSRRAAERCADVGVAFVDAPVL
                     GSTPAAEQGTLTVLAGGSEVAVLAAEPLLRIFGSRVVRTGEVGSASALKLVMNVLVGG
                     LTELLAEGMLLAERSGVAKEVVRDALFSSVLNSPFLGYKAPQLLERRFTPLFTTGLML
                     KDLDLALALAADEGLVLPGTAAIREAYAATAAAGRRDDDFSAVIEELDRGGATRASP"
BASE COUNT          325 a          792 c          744 g          229 t
ORIGIN      
        1 gcacgagtcg ctctccgccc agcccgcgcg gccgaggagc gcggcgcgca gcgaatcggc
       61 gcgatgcagc gcgtgcgcgt cgtcgggcgg cgcggcgacg gccgcggtgg tccgtgcggc
      121 gcggccgctg gaggacgcgc agccagccag tgccgcgggg agaacgagga gggcgacgac
      181 gacggtggta cgcaggagag accttcggtg agtgtgagag cgagccgaac gccgggcgac
      241 gccgcttcta gcgatgtctc gacggacgca gcggggccgg gtcgtgctcg gcggcgtcct
      301 ccgcggactc ctcgtcgtcg agctggtcgg ccatctcggc ggccgcggcg ccacgatcga
      361 tcgcctcgcg ctcggcgcga tagcgctcgt accactcgcg cgtgacctcg cccgcgagct
      421 cgcggttgcc gagcccgaac gacagcgcga gcgccagcgc gacggcgccg aagaggatcg
      481 cgaacgccgt cgtcaccagc tcggtggcca cgccgagctg ctgcaacgcc atgaagaccg
      541 cgaggacgat cacgcccccg cgccccaccc gcgccagcgt cggcccgccg tgaatgcccc
      601 ccgccgacgc catgatcagc ccgcccacga agccccccag cacgatcccg acgaggacga
      661 tgacgagggc cgcgatcacg ctcgggatgt agcccaccag ctccgagaac acctcggcga
      721 gcgcctcgag acggagcgcg ttcgccgcga cgagcatcac ggtgaacatc accatccaga
      781 agaacaggtt ggcgatgacc cgggtcgggt tgacgtgcgc ccccgagcgc tcgacgacct
      841 gcagcacgcc gccgcgctcg agcatccggt tgagctgcac gcgccgcagg aagcggtcgg
      901 tgcccttctc caccagcttc gcgaggaggt agcccgcgaa caggatgacg atcgcgccga
      961 gcatcgccgg cacgaactcc gccacctgcg ccaggctcgc catcatccgg tcggcgaacg
     1021 tgtcgccgac cgtgcccgcc tggctggaga gcgcgcgcac cggagccgtc gccgcacgca
     1081 gcgcggcgac gctgtccagc agggtgtcgg tcacgatgct gtcggcgggt ggaacggtca
     1141 gctgaaacac ggcggtgagt gggggacgat gacgcggccc tgtccgcgcg aatccgcggc
     1201 gcgcgactac gggaagccga gaaccgaaag ctaaacccga atcaccccgg tgcgaggccc
     1261 gtcagggcga cgcgcgcgtg gcgccgccgc gatccagctc ctcgatcacc gccgagaagt
     1321 cgtcgtcgcg ccggccggcc gcggccgtcg cggcgtacgc ctcgcggatc gccgccgtcc
     1381 cgggcagaac gagtccctcg tccgcggcca gggccagcgc gaggtcgagg tccttgagca
     1441 tcagccccgt cgtgaagagg ggggtgaagc ggcgctccag gagctgcggc gccttgtagc
     1501 ccaggaaggg cgagttgagc accgacgaga agagcgcgtc gcgcaccacc tccttggcca
     1561 caccgctgcg ctccgcgagc agcatcccct cggcgagcag ttcggtgagc ccgccgacaa
     1621 gcacgttcat cacgagcttg agcgcgctcg cgctccccac ctcccccgtg cgcacgaccc
     1681 gcgacccgaa gatccgcagc agcggctcgg cggccagcac cgccacctcg gagccgccgg
     1741 ccagcacggt cagcgtgccc tgctccgcgg ccggcgtgct gccgagcacc ggcgcgtcca
     1801 cgaaggccac gccgacgtcg gcgcaccgct ccgccgctcg ccgcgagtcg gcgggcccga
     1861 cggtcgaaca gtcgatcacc gtcgcgccgg gcgcgagcgc cgcgaggact ccctcgtcgc
     1921 cgcggaggac ggcgtcgagc gccgccggat cggtgagcat cagcaccacg aagcgcgccc
     1981 cgcgcgccgc cgcggccggc gaatcggcga ccgtcgcccc acgctcgccg agcgcgcctg
     2041 tgcgttccgc cgtgcgattc cagacggtga gcggatatcc cgcggcgagc
//
LOCUS       DASSYW010000952         2344 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1391326, whole genome shotgun sequence.
ACCESSION   DASSYW010000952 DASSYW010000000
VERSION     DASSYW010000952.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2344)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2344)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2344
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1391326"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1180
                     /locus_tag="VFN38_15035"
     CDS             <1..1180
                     /locus_tag="VFN38_15035"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HET9013139.1"
                     /translation="YSAPEANASVALVHDYLLVLRGAERTFAAIAACWPEAPIHTLLH
                     DAEATAPMFGGRTVHTSYLERLGIRQDGFRRLLPLFPTAARRMKLAPHDVVISSSSAF
                     AHGVDPAPGADHICYCHTPFRYAWHERDRALAEVPRALRPAMRGLLARVRRWDLEASR
                     RVTHYIANSAITRERIAQTYGRDVAIVHPPVDVDRFAIGEPEDFFLIATEVVPHKRVE
                     LALQAARSAGVQVKVVGSGPDVPRLRELYGDSARFMGHVSDTELTSLFQRARALIVPN
                     VEEFGIAAVEAQAAGRPVVAADAGGVRETVLPGSTGVLVKSGDVDDLAEALRYTDFDR
                     FDPLVAKMNAERFSQAEFQRRFVAEVEYATGGRVLGQAPDAPPDIPSQRRRFTRSASS
                     "
     gene            complement(1144..>2344)
                     /locus_tag="VFN38_15040"
     CDS             complement(1144..>2344)
                     /locus_tag="VFN38_15040"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF045194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HET9013140.1"
                     /translation="AARAGRREMRVLYVNHTARMSGGERSLLDLLAGLPANVTPVLAC
                     PEGPLAAAARQIGVRVVRIRGTDGSLKLHPLWTTQALVEIAVAAGSVRRLSSRVGADL
                     IHANSIRAGMTVSLAARMGAPPALVHVHDALPPGRVSDLTRRAVGAGAVGLLPNSRYT
                     EASFRPPGFRGFVRVVDNPVDLERFDPGSVDRDVARAALGIEPDELALGVVAQITPWK
                     GQDDAIRILAGLRERHPRARLLLAGSTKFTSRATRYDNPAFLRRLRELANELGVVGGV
                     TFLGEREDIPSILRALDIALVPSWEEPFGRSVIEAMAMGVPVAATSAGGPAEIIRDGV
                     DGLLLPPRDPQAWTAAIAPLAEDPAGRAEMGARGRERAAARYGVETFVRAVVGAYDEA
                     LRVNRRR"
BASE COUNT          308 a          887 c          850 g          299 t
ORIGIN      
        1 gtattccgcg ccggaggcca acgcctcggt cgcgctggtg cacgactacc tgctggtcct
       61 ccgcggcgcc gagcgcacgt tcgcggccat cgccgcctgc tggccggagg ccccgatcca
      121 cacgctcctg cacgacgccg aggccaccgc gccgatgttc ggcggccgca ccgtgcacac
      181 ctcgtacctc gagcggctgg ggatccggca ggacggcttc cgccggctgc tgcccctgtt
      241 ccccaccgcg gcccggcgga tgaagctggc cccgcacgac gtcgtgatct cgagcagcag
      301 cgcgttcgcc cacggcgtcg atcccgcacc cggcgccgac cacatctgct actgccacac
      361 gccgttccgc tacgcctggc acgagcgcga ccgggcgctg gccgaggtgc cgcgcgcact
      421 gcggcccgcc atgcgcgggc tgctggcgag ggtccgccgc tgggacctgg aggcgtcgcg
      481 ccgggtgacc cactacatcg cgaactccgc catcacgcgc gagcgcatcg cgcagaccta
      541 cgggcgcgac gtggccatcg tgcatccccc ggtggatgtc gaccgcttcg cgatcggcga
      601 gccggaggac ttcttcctga tcgcgaccga ggtcgtgccg cacaagcgcg tcgagctggc
      661 tctccaggcc gctcggagtg ccggcgtgca ggtgaaggtc gtgggcagcg gcccggacgt
      721 cccgcggttg cgcgagctct acggcgactc ggccaggttc atggggcacg tctcggacac
      781 ggagctcacc agtttgttcc agcgcgcacg cgcgctgatc gtcccgaacg tcgaggaatt
      841 cggcatcgcc gcggtggagg cacaggctgc cggccgcccg gtcgtcgcgg cggacgccgg
      901 cggcgtgcgg gagaccgtgc tgccggggtc gaccggcgtg ctcgtcaagt ccggcgacgt
      961 cgacgacctc gcggaggcgc tgcgctacac cgacttcgac cgcttcgatc cgctcgtcgc
     1021 gaagatgaac gcggagcggt tctcgcaggc ggagttccag cggcgcttcg tggccgaggt
     1081 cgagtacgcc accggcgggc gcgtcctcgg gcaggcaccg gacgcgccgc cggacatccc
     1141 gtctcagcgg cgccggttca cgcgcagcgc ttcgtcgtag gcgccgacga ccgcgcgcac
     1201 gaacgtctcg acgccgtagc gcgcggccgc gcgctcgcgg ccgcgcgcac ccatctccgc
     1261 gcggccggcc ggatcctcgg cgagcggggc gatcgccgcc gtccacgctt gagggtcgcg
     1321 cggcggcagc agcagaccgt cgacgccgtc gcggatgatc tccgcggggc cgccagccga
     1381 ggtggccgcc accggcacgc ccatggccat cgcctcgatg accgacctgc cgaaaggctc
     1441 ctcccaggag ggcacgagcg cgatgtcgag cgcgcgcagg atgctcggga tgtcctcgcg
     1501 ctccccgagg aacgtgacgc cgcccaccac cccgagctcg ttcgcgagct cgcgcaggcg
     1561 gcggaggaag gcggggttgt cgtagcgggt cgcgcggctc gtgaacttcg tggagcccgc
     1621 cagcagcagg cgcgcgcgcg gatggcgctc gcgtagcccg gcgaggatcc ggatggcgtc
     1681 gtcctggccc ttccagggcg tgatctgcgc aaccacgccc agcgcgagct cgtcgggctc
     1741 gatcccgagc gccgcgcgcg cgacgtcgcg atcgacgctg cccgggtcga accgctcgag
     1801 gtccaccggg ttgtccacga ctcgcacgaa gccccggaat cccggcggcc ggaagctcgc
     1861 ctcggtgtag cgcgagttgg gcagcagccc caccgcgccg gcgcccaccg cgcggcgcgt
     1921 gaggtcggac acgcggcccg gaggcagcgc gtcatgcacg tgcacgagcg ccggcggcgc
     1981 ccccatgcgc gcggccagcg acacggtcat gccggcgcgg atcgagttcg cgtgaatgag
     2041 gtcggcgccg acgcgcgacg acagccgccg gacgctgccg gcggcgaccg cgatctccac
     2101 cagggcctgc gtggtccaga gcgggtgcag cttcaggctg ccgtccgtcc cgcggatgcg
     2161 gacgacccgc acgccgatct gcctggccgc ggccgccagc ggcccctccg ggcaggcgag
     2221 caccggcgtg acgttcgcgg gcaggccggc gagcaggtcg agcagcgatc gctcgccccc
     2281 gctcatgcgg gccgtgtggt tgacatagag gaccctcatc tcgcgccgcc cagctcgagc
     2341 agca
//
LOCUS       DASSYW010000953         2049 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_762865, whole genome shotgun sequence.
ACCESSION   DASSYW010000953 DASSYW010000000
VERSION     DASSYW010000953.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2049)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2049)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2049
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_762865"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..331)
                     /locus_tag="VFN38_15045"
     CDS             complement(<1..331)
                     /locus_tag="VFN38_15045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013141.1"
                     /translation="MTVPVTGAPGDVGAGHEARDRTATRGPSRVHATPHTTGLERIRT
                     VVVNEHEDLARLVATRIATVIRERNATGKAAVLGLATGSTPIGVYRELIRMHREEGLS
                     FANVVTFN"
     gene            complement(345..701)
                     /locus_tag="VFN38_15050"
     CDS             complement(345..701)
                     /locus_tag="VFN38_15050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly accessory protein"
                     /protein_id="HET9013142.1"
                     /translation="MSTTNQPEVLMTVTPVAGAEVRKFMAQEGVDPAVGGLRVSVQPG
                     GCSGFKYGLLIEDAAAEDDLIVDQGDYRVFVDPFSAQYISGVVIDYTSSMQGSGFTFK
                     NPNATGGCGCGSSFSA"
     gene            complement(853..>2049)
                     /locus_tag="VFN38_15055"
     CDS             complement(853..>2049)
                     /locus_tag="VFN38_15055"
                     /inference="COORDINATES: protein motif:HMM:NF012686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013143.1"
                     /translation="MDKLTAGLATKFRSSTAAISVLPVKVGPNGLEAYTWMPLLALAV
                     FLSVQWWAAWYPGAEPGGGGYVAQRIFSSKTERDGVLATLFFQVAHYAIRPWPWIITG
                     LATVLLYPAGIGPTHDHEAAYVQAFVDLLPSPWRGFMMAGFAAAYMSTVGTQLNWGAS
                     YLVNDFYKRFVNKDATEKHYVSVSRWATVLLFLGSVFVTMNLQTVEGAWKFLLALGSG
                     TGLVLILRWYWWRINAWSEISAMIASFVVSITAITAFRGRFPAGDLRADAWVMLTTVL
                     VSTIIWVSVTFLTAPEPESKLESFYERVRPGGPGWRRISDRLGYGGESIPGGALAWTN
                     WLAGIIAVYASLFGIGKLIFGELMTGLIMLVVAALAFAWIAKAFREEDAGPRAQRDVV
                     RPVAAD"
BASE COUNT          349 a          669 c          721 g          310 t
ORIGIN      
        1 gattgaacgt cacgacgttc gcgaagctca atccctcctc gcggtgcatc cggatcagct
       61 cacggtacac gccgatcggc gtggacccgg tggcgaggcc cagcaccgcc gccttgccgg
      121 tggcgttccg ttcgcggatc acggtggcga tgcgcgtcgc gacgagccgg gcgaggtcct
      181 catgctcgtt gacgacgacg gtgcgaatgc gctcgaggcc ggtggtgtgc ggcgtggcgt
      241 ggacacgcga aggcccgcga gtcgctgtgc gatcgcgggc ctcgtgcccg gcgccgacgt
      301 ccccaggggc gccagtaacc ggtacggtca tcggttgaat cggttcaggc cgagaaggag
      361 cttccgcaac cgcagccgcc ggtcgcgttc gggttcttga aggtgaagcc ggagccctgc
      421 atcgacgagg tgtaatcgat gacgacgccg ctgatgtact gcgccgagaa cggatcgacg
      481 aacacgcggt agtccccctg atcgacgatc aggtcgtcct ccgccgcggc gtcctcgatg
      541 aggaggccgt acttgaatcc gctgcaaccg ccgggctgga cgctcacgcg cagaccgccg
      601 acggcgggat cgaccccttc ctgggccatg aacttcctga cctcggcgcc cgcgacgggc
      661 gtgacggtca tcaggacttc gggctgattg gtggtgctca caggtcctcc agtgtgtagc
      721 gccgcctcgg cggccgcgcg gtattcacta cctaagtata tacccgccgg cggggtcagg
      781 ttcaagcttt ttcgccctgt ggcgggacga aaaacgagta ccatcggcac gggacgggtt
      841 cccgtgccgc gctcagtcgg cggccacggg ccgcacgacg tcgcgctgcg ccctggggcc
      901 ggcatcctcc tcccggaacg ccttggcgat ccaggcgaag gccagggcgg ccaccacgag
      961 catgatcagt cccgtcatca gctccccgaa gatcagcttg ccgatgccga agaggctggc
     1021 gtacacggcg atgatgcccg ccagccagtt ggtccacgcg agcgccccgc cgggaatgga
     1081 ctctccgccg tagcccagcc ggtcggagat gcgccgccag ccgggcccgc ccggccgcac
     1141 tcgctcgtag aacgactcca gcttgctctc gggctccggc gcggtgagga aggtcacgct
     1201 cacccagatg atcgtgctca cgaggaccgt cgtgagcatg acccaggcgt cggcccgcag
     1261 gtcgccggcg ggaaagcggc ccctgaaggc ggtgatggcg gtgatggaga cgacgaagga
     1321 cgcgatcatc gcgctgatct cgctccaggc gttgatgcgc caccagtacc accggaggat
     1381 cagcacgagc cccgtgcccg acccgagggc gaggaggaac ttccaggcgc cctccacggt
     1441 ctggaggttc atcgtgacga acaccgagcc caggaagagg agcacggtgg cccagcgcga
     1501 cacggagacg tagtgcttct cggtggcgtc cttgttgacg aagcgcttgt agaagtcgtt
     1561 gacgagatag gacgcgcccc agttgagctg ggtgcccacg gtggacatgt acgccgcggc
     1621 gaagcccgcc atcatgaagc cccgccaggg ggaggggagc aggtcgacga acgcctgcac
     1681 gtaggccgct tcgtgatcgt gcgtgggccc gatgcccgcc ggatacagca ggaccgtggc
     1741 gaggccggtg atgatccagg gccacggacg gatggcgtag tgcgccacct ggaagaacag
     1801 cgtcgccagc acgccgtcgc gctcggtctt ggacgagaag atgcgctgtg cgacgtaccc
     1861 accgccgccg ggctcggcac cgggatacca ggcggcccac cactgcacgg agaggaacac
     1921 ggcgagggcg agcagcggca tccatgtgta ggcttcgagg ccgttgggtc cgaccttgac
     1981 ggggagcacg gagatcgcgg cggtcgagct gcggaacttg gtggcgagtc ccgccgtgag
     2041 cttgtccat
//
LOCUS       DASSYW010000954         2130 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_673150, whole genome shotgun sequence.
ACCESSION   DASSYW010000954 DASSYW010000000
VERSION     DASSYW010000954.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2130)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2130)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2130
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_673150"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            92..631
                     /locus_tag="VFN38_15060"
     CDS             92..631
                     /locus_tag="VFN38_15060"
                     /inference="COORDINATES: protein motif:HMM:NF024304.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HET9013144.1"
                     /translation="MPTSSGPTFRSLSRGECDALLARNHVGRLAFAFHDRVDIQPIHY
                     VYEAGWLFGRTSEGAKLATLEHNRWIAFEVDEVRGPFDWASVVVQGTFHRIDPAGSTS
                     DRAAAARAVRLLRAIVPGTFTADDPAGFRTVLFRIAVGELTGRMAAPVADASAAAAPE
                     RLPPLGGRAPVAPSDHQGW"
     gene            636..1361
                     /locus_tag="VFN38_15065"
     CDS             636..1361
                     /locus_tag="VFN38_15065"
                     /inference="COORDINATES: protein motif:HMM:NF039641.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6064 family protein"
                     /protein_id="HET9013145.1"
                     /translation="MQLPFTTEQFLGVFRLYNLVVWPAQLLLYALAFAAVALALRGGA
                     HGGRVAAGILAFLWLWSGGAYHLEFFAAISPAAYLFGALFVVEGVLLIRLGVVGHRRL
                     TFAPRRDAHGAAGALLVLYALAGYPLLGYLLGHRWPATPTFGVPCPTTIFTLGLLLWA
                     ARPVPRALLAIPLLWAIVGSVAALRLGMTEDYGLTVAAVVVALLALAGQRPESTRRRA
                     FASASSRPHMMSQSEKTSSPASP"
     gene            complement(1259..1591)
                     /locus_tag="VFN38_15070"
     CDS             complement(1259..1591)
                     /locus_tag="VFN38_15070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HET9013146.1"
                     /translation="MTAAQMTPDVIELVAARFRALAEPARLHIMTALRDGERTVNALV
                     DETGLATGNVSKHLQLLHAAGFVTRRKEGVYVYYGLAGEEVFSLCDIMCGRLEAEAKA
                     RRRVLSGR"
     gene            complement(1650..>2130)
                     /locus_tag="VFN38_15075"
     CDS             complement(1650..>2130)
                     /locus_tag="VFN38_15075"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HET9013147.1"
                     /translation="IVDESRGERAGEAIRDLAMIGLDDVAGYFGADAVERWPSAGRAL
                     ETVEQATADEVASLMASEAVHVVDVRGRAEWESGHMSGVPNIPVGYLGDRLAELPADR
                     PVVVHCQSGARSAIAASVLLAKRGGRVINMVGGINAWRQAGLPVTPAGAADAALAPA"
BASE COUNT          233 a          841 c          730 g          326 t
ORIGIN      
        1 ggcgtgctga aggtggccgt cactccctga gaggatcgtg cgcggagcaa cgcgccgcgg
       61 cggcggagtc accctgaagg aggcgccgac aatgccgaca tcgtccggtc ccacctttcg
      121 ctcgctgagc cggggcgagt gcgacgcgct gctcgcccgc aatcatgtgg gccgcctggc
      181 cttcgccttc cacgaccggg tggacatcca gcccatccac tacgtctacg aagccggctg
      241 gctcttcggc cgcacctcgg aaggcgccaa gctggccacc ctcgagcaca accgctggat
      301 cgccttcgag gtggacgagg tgcgggggcc gttcgactgg gcgagcgtcg tcgtccaggg
      361 caccttccac cgcatcgacc ccgcgggctc cacgtcggac cgcgcggcgg ccgcgcgcgc
      421 cgtgcgcctc ctgcgcgcga tcgtccccgg caccttcacg gccgacgatc cggcgggctt
      481 ccgcacggtg ctcttccgga tcgcggtcgg cgagctgacg gggcgcatgg cggcgccggt
      541 ggcggacgcg agcgccgcgg cggcaccgga gcgactcccg ccgctcggcg gtcgcgcgcc
      601 cgtcgctccc tccgaccatc aggggtggta gcgccatgca gcttccgttc accaccgagc
      661 agttcctcgg ggtcttccgg ctctacaacc tcgtggtctg gcccgcccag ctgctcctct
      721 acgcgctggc cttcgccgcc gtcgcgctcg ccctgcgcgg cggcgcgcac ggcgggcgcg
      781 tcgcggccgg catcctcgcc tttctctggc tctggagcgg cggcgcgtat cacctggagt
      841 tcttcgccgc catcagtccg gccgcctatc tcttcggcgc cctcttcgtc gtcgagggtg
      901 tcctgctgat ccgcctcggc gtcgtcggcc accgccgcct caccttcgcg ccacggcgcg
      961 acgcccatgg cgcggccggc gcgctgctcg tcctctacgc gctggccggc tacccgctgc
     1021 tcggctacct gctcgggcac cgctggccgg cgacgcccac cttcggcgtt ccctgcccga
     1081 ccacgatctt cacgctcggg ctgctgctct gggcggcgcg ccccgttccg cgggcgctgc
     1141 tggcgatccc gcttctctgg gcgatcgtcg ggagcgtggc ggcgctgcgg ctcgggatga
     1201 cggaggacta cggactcacc gtcgccgccg tcgtcgtcgc gctgctcgcc ctcgccggtc
     1261 agcggccgga gagcacccgc cggcgcgcct tcgcctcggc ctcgagccgc ccgcacatga
     1321 tgtcgcagag cgagaagacc tcctcccccg ccagcccgta gtagacgtac accccttcct
     1381 tgcggcgcgt gacgaagccc gccgcgtgca gcagctgcag gtgcttcgag acgttgcccg
     1441 tcgcgagccc cgtctcgtcc accagcgcgt tcaccgtccg ctcgccgtcg cggagcgcgg
     1501 tcatgatgtg caggcgcgcc ggctcggcga gggcgcggaa gcgcgcggcc acgagctcga
     1561 tcacgtcggg ggtcatctgc gcggcggtca tctgatctcc aggaaacggt gcggtgggtc
     1621 gggagcgtcg ctcacgcgcg actcgcggct catgcgggcg ccagcgcggc gtcggcggcg
     1681 ccggccggcg tgaccggcag acccgcctga cgccaggcgt tgatcccgcc caccatgttg
     1741 atcacgcgcc ccccgcgctt cgcgaggagg acgctcgccg cgatcgccga gcgggcgccg
     1801 ctctggcagt gcacgacgac gggcctgtcg gcgggcagct cggcgagccg gtcgccgagg
     1861 tagccgacgg ggatgttcgg cacgccgctc atgtggccgc tctcccattc ggcgcgcccg
     1921 cgcacgtcca cgacgtgcac cgcctcgctc gccatcaggc tcgcgacctc gtcggccgtc
     1981 gcctgctcga cggtctcgag cgcgcgtccc gccgacggcc agcgctcgac cgcgtcggcg
     2041 ccgaagtatc cggccacgtc gtccagtccg atcatcgcca ggtcgcggat cgcctcgccg
     2101 gcgcgctcgc cgcgcgactc gtccacgatc
//
LOCUS       DASSYW010000955         2288 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_514673, whole genome shotgun sequence.
ACCESSION   DASSYW010000955 DASSYW010000000
VERSION     DASSYW010000955.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2288)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2288)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2288
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_514673"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            104..694
                     /locus_tag="VFN38_15080"
     CDS             104..694
                     /locus_tag="VFN38_15080"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: protein motif:HMM:TIGR00758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004844 - uracil DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HET9013148.1"
                     /translation="MGIPVPPAGGLWGLHEDIRKHRACGFAICEAALNLVPGEGPEDA
                     AVMVVGEAPGRFEDEQGRPFVGRAGQLLDEVLAEAGLARGEVFITNVVKARPPGNRDP
                     TKAEVAHWMPVLEAQLALVAPALIVPLGRHALAHFAPAAKIGEAHGRALTERGRELFP
                     LYHPAAALRSTKLRETLFADARAMGDLARLRAAPSG"
     gene            704..1834
                     /locus_tag="VFN38_15085"
     CDS             704..1834
                     /locus_tag="VFN38_15085"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HET9013149.1"
                     /translation="MAQLEVPPVVRPDPAPEPPPRWSGDDAVPRGLAVTSAVTLRVII
                     VVGGIVLLALFAKRMLVVVLPVIIALLLATLLTPLAHWLRKRKAPPALASALAVGLAL
                     VVVLGLWGLVIPPFVSQVPDVVENVQQGAGQVGDVARPLGLSDREVQDAIEKARDQLQ
                     GGQVAGKLLTGAMLVVQWAAAVILIVVLTFFFIKDGTQLRDWTVCLFAEHRRDTLREI
                     SERAWSALATYVQGVFLVATLDAVLIGIVLVIVGVPIALPLIVLTFIAAFFPIIGAVM
                     AGAAATLVALVSGGIVDAAIVFAAILAIQQLEGNVFYPMVVGKRLQLHPVAILLALTA
                     GGVLAGVAGAFLAIPVAAVTSAVLDYVRTRRREEGSALIATP"
     gene            1846..>2288
                     /locus_tag="VFN38_15090"
     CDS             1846..>2288
                     /locus_tag="VFN38_15090"
                     /inference="COORDINATES: protein motif:HMM:NF025033.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HET9013150.1"
                     /translation="MDAAMQEYYEQRAPEYDDWWLGTGLFASRERPGWEADVAALQSS
                     LATLAPARTLDVACGTGFLTRHLPGEVTGLDQSAGMLEVARARMPGATFVRGDALDPP
                     FGAGAFERVHAGHFYGHLVPEQRTAFLALAARLAGELVITDSALRP"
BASE COUNT          263 a          823 c          849 g          353 t
ORIGIN      
        1 gtccggcttg ttgcccttgc cggcgccctt gccgcggtcc gcggcggccg gcaccgcgat
       61 cgcggcgcac gcgatcaggg ccatggtgat cagaatcggt ctcatgggaa ttccggtacc
      121 ccctgcaggt ggactatggg gactgcatga agacatacgt aagcatcgcg catgcggttt
      181 tgcgatctgc gaagccgcgc tgaacctcgt gccgggcgaa gggcccgagg acgcggccgt
      241 gatggtcgtg ggcgaggcgc ccgggcgctt cgaggacgag caggggcgcc cgttcgtggg
      301 ccgcgccggt cagctgctcg acgaggtgct cgcggaggcg gggctcgccc gcggcgaggt
      361 gttcatcacc aacgtcgtca aggcgcgccc gccgggcaac cgcgacccca cgaaggccga
      421 ggtggcgcac tggatgccgg tgctcgaggc gcaactcgcg ctggtggcgc cggcgctgat
      481 cgtgccgctc ggccgccacg cgctcgcgca tttcgcgccg gccgccaaga tcggcgaggc
      541 ccacgggcgg gcgctcaccg agcgcggccg cgagctgttc ccgctctatc acccggccgc
      601 tgcactgcgc tccacaaagc tgcgtgagac gctgttcgcg gacgcccgcg cgatgggaga
      661 tctggcgcgt ttgcgcgcgg ccccgtccgg ctaatcgtgg gccatggcgc agctggaggt
      721 cccaccggtc gtgcgcccgg atcccgcgcc cgagccgccg ccgcgctggt ccggcgacga
      781 cgccgttccg cgcgggctcg cggtcacctc cgcggtcacg ctgcgggtga tcatcgtggt
      841 cggcggcatc gtgctgctgg cgctgttcgc caagcgcatg ctcgtcgtgg tgctgccggt
      901 gatcatcgcc ctgctgctgg cgacgctgct gaccccgctc gcgcactggc tgcgcaagcg
      961 caaggcgccg ccggcgctcg cctcggcgct cgcggtcggc ctggcgctcg tcgtcgtcct
     1021 cggattgtgg ggactcgtga tcccgccgtt cgtgagccag gtgcccgacg tggtcgagaa
     1081 cgtccagcag ggcgccgggc aggtcggcga cgtcgcccgg ccgctcgggc tctccgaccg
     1141 cgaggtccag gacgcgatcg agaaggcgcg cgaccagctg cagggcggcc aggtcgccgg
     1201 caagctgctg accggggcga tgctggtcgt gcagtgggcg gccgccgtga tcctgatcgt
     1261 cgtcctgacg ttcttcttca tcaaggacgg cacgcagctg cgcgactgga cggtctgcct
     1321 gttcgccgag caccggcgcg acacgctgcg cgagatcagc gagcgcgcct ggagcgcgct
     1381 cgcgacctac gtgcagggcg tcttcctggt cgccacgctc gacgcggtgc tgatcggcat
     1441 cgtgctcgtg atcgtcggcg tgccgatcgc gctgccgctg atcgtgctca cgttcatcgc
     1501 cgccttcttc ccgatcatcg gcgcggtgat ggcgggcgcg gccgcgacgc tcgtcgcgct
     1561 tgtcagcggc ggcatcgtcg acgccgcgat cgtgttcgcg gcgatcctcg cgatccagca
     1621 gctcgagggc aacgtcttct acccgatggt cgtcggcaag cggctgcagc tgcaccccgt
     1681 cgcgatcctg ctcgcgctga ccgccggcgg cgtgctggcc ggcgtggcgg gcgcgttcct
     1741 ggcgatcccg gtcgcggccg tcacctcggc ggtgctcgac tacgtgcgca cgcggcggcg
     1801 cgaggaagga tccgcgctca tcgccacccc gtagcctggg gccgcatgga cgcggcgatg
     1861 caggagtact acgagcagcg cgcgcccgag tacgacgact ggtggctcgg gacgggcctg
     1921 ttcgcgtcgc gcgagcggcc gggctgggag gcggacgtcg ccgcgctgca gtcctcgctg
     1981 gccacgctgg cgcccgcgcg cacgctcgac gtcgcctgcg gcaccggctt cctcacgcga
     2041 cacctgccgg gtgaggtcac cgggctggac cagagcgccg ggatgctcga ggtcgcccgc
     2101 gcgcggatgc ccggcgcgac gttcgtgcgc ggcgacgcgc tcgacccccc attcggggcc
     2161 ggcgccttcg agcgcgtcca tgccgggcac ttctacgggc acctggtccc cgagcagcgg
     2221 acggccttcc tcgcgctggc ggcgcggctc gcgggcgagc tcgtgatcac cgactcggcg
     2281 ctgcggcc
//
LOCUS       DASSYW010000956         2999 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1133501, whole genome shotgun sequence.
ACCESSION   DASSYW010000956 DASSYW010000000
VERSION     DASSYW010000956.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2999)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2999)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2999
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1133501"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(51..1925)
                     /locus_tag="VFN38_15095"
     CDS             complement(51..1925)
                     /locus_tag="VFN38_15095"
                     /inference="COORDINATES: protein motif:HMM:NF012926.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 15 protein"
                     /protein_id="HET9013151.1"
                     /translation="MTIPAWAETSQPWRLSESGDYPPISAYALVGDMHTAALVALNGS
                     IDWCCLPRFDSPSVFAAILDAAKGGSFQIAPSGRYTSEQRYLPATAVVVTTFRTEEGG
                     VVELTDFMPVGRPEKNGRRAELHRRVRCTRGEAEVIVRFRPRFDYGASTTLLFPRANG
                     VIATDGDDESLALAAPRSIWWHLENATAHATLKLAAEEEHWFVLRYDDDEVNPLASYG
                     SEASLAETIAFWDRWVAKITYEGPYRVPVERSAITLKLMCYEPTGAIVAAPTMSLPEE
                     LGGIRNWDYRYSWLRDSAFVLYSFHVLGHYDEADRFMSFLKRITRKATDAHLQIMYGI
                     DGRRELTERTLEHLEGYRRSAPVRVGNGAYDQVQLDVYGEVLETAWLWSRHHTISEGT
                     WATLQRLVSWIADHWTMRDSGIWEVRAGPQHYVLSKVMCWVALDRGIRLAQKFDLPAD
                     LDRWRRERDAVHADVMARGWSEEKQSFVQYYGTDALDASNLIIPMVHFLPRDHPRVVG
                     TVMATLRELTSDDQELVFRYRNDDGLPGEEGVFSICTFWLAETLAMCGEMERAERIFQ
                     RMLRHANHVGLYSEELHPTSGEFLGNFPQAFTHIALINCASVFEKLKARREPDMEAGV
                     "
     gene            complement(1990..2865)
                     /gene="otsB"
                     /locus_tag="VFN38_15100"
                     /pseudo
     CDS             complement(1990..2865)
                     /gene="otsB"
                     /locus_tag="VFN38_15100"
                     /inference="COORDINATES: protein motif:HMM:NF014418.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004805 - trehalose-phosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="trehalose-phosphatase"
BASE COUNT          421 a         1009 c         1133 g          436 t
ORIGIN      
        1 ccacgtagag ccctacgtgg tgtgcccgtc tcttacttct ttcgctctgg ctacaccccc
       61 gcttccatgt ccggctcccg ccttgccttc agcttctcga acaccgacgc gcagttgatg
      121 agcgcgatgt gggtgaaggc ctgcgggaag ttgccgagga actcccctga cgtcgggtgc
      181 agctcctcgc tgtagagccc gacgtggttg gcgtggcgaa gcatccgctg gaagatgcgc
      241 tcggcgcgct ccatctcgcc gcacatcgcc agcgtctcgg cgagccagaa ggtgcagatc
      301 gagaagaccc cttcctcgcc cggcagtccg tcgtcgttgc ggtagcggaa gacgagctcc
      361 tggtcgtcgc tcgtcagctc gcggagcgtc gccatcacgg tgccgaccac gcgcgggtgg
      421 tcgcgcggga ggaagtgcac catcgggatg atgaggttgg aggcgtcgag cgcgtcggtg
      481 ccgtagtact gcacgaagct ctgcttctcc tcgctccacc cccgggccat gacgtcggcg
      541 tgcaccgcgt cgcgctcgcg gcgccagcga tcgaggtcgg ccggcaggtc gaacttctgg
      601 gccagccgga tgccgcgatc gagggcgacc cagcacatca ccttgctcag cacgtagtgc
      661 tgcgggccgg cgcggacctc ccagatgccg ctgtcgcgca tcgtccagtg gtcggcgatc
      721 caggacacga ggcgctggag cgtcgcccag gtcccctcgc tgatcgtgtg atggcggctc
      781 cagagccacg ccgtctcgag cacctcgccg tagacgtcga gctgcacctg gtcgtaggcc
      841 ccgttgccga cgcgcaccgg cgccgaccga cggtagccct cgaggtgctc gagcgtgcgc
      901 tcggtgagct cgcgccgccc gtcgatgccg tacatgatct gcagatgcgc gtcggtcgcc
      961 ttgcgcgtga tccgcttcag gaagctcatg aagcggtcgg cctcgtcgta gtgcccgagg
     1021 acgtggaacg agtagaggac gaaggccgag tcgcggagcc agctgtagcg atagtcccag
     1081 ttccggatcc cgccgagctc ctcgggcaac gacatcgtgg gcgcggccac gatcgcgccg
     1141 gtcggctcgt agcacatcag cttgagggtg atcgccgatc gctcgacggg cacgcgatag
     1201 gggccttcgt aagtgatctt ggcgacccac cgatcccaga acgcgatcgt ctcggcgaga
     1261 gatgcctcgg agccgtacga ggcgaggggg ttcacctcgt cgtcgtcgta gcgcagcacg
     1321 aaccagtgct cctcctccgc cgcgagcttg agggtggcgt gggcggtcgc gttctcgaga
     1381 tgccaccaga tggagcgggg ggcggccagg gcgagcgact cgtcgtcccc gtcggtggcg
     1441 atcacgccgt tggcgcgcgg aaagaggagc gtcgtcgagg cgccgtagtc gaagcgcggg
     1501 cggaagcgaa cgatgacctc cgcctcgccg cgggtgcagc ggacgcggcg gtgcagctcg
     1561 gcgcggcggc cgttcttctc cgggcggccg acgggcatga agtcggtgag ctcgacgacg
     1621 ccgccctcct ccgtgcgaaa ggtcgtgacg acgaccgcgg tcgccggcag gtagcgctgc
     1681 tccgaggtgt agcgtccgga gggcgcgatc tggaagcttc cccccttcgc cgcgtcgagg
     1741 atcgcggcga agacggacgg ggagtcgaag cgcggcaggc agcaccagtc gatcgagccg
     1801 ttgagggcga cgagcgcggc ggtgtgcatg tcgccgacga gcgcgtaggc ggagatcggc
     1861 ggatagtctc cgctctccga cagccgccag ggctgcgagg tctcggccca ggccggaatg
     1921 gtcatgtgtg cgatcgtgga gcgtggggcg gggagcgtcg aaccagcttc tggtgaatac
     1981 cctggcgcgt cacgccgacg caagccatgc gtcgagccgc tcgagcagga ggcggagcgc
     2041 cggaagtccg gggacggaga gctcggcgtc ggtggtgaac ggcgcgtcgg acgcgccgcg
     2101 gccggcggcc tcgccgagca cccggatcgt cagcgctcgc gggacctcgg cgcgcagggc
     2161 gcgaaaggca tcctcgtcgg tgaggtcgtc gccggcgaag aggagggccg cgcccggcgc
     2221 gtcggcgccg agccggcggg ccaggtgaag gagcgcggtt cccttgtcca cctccaccgg
     2281 cgggcgcagc tcgaagatct tcttgccgtg cttgagcagg agtcccgact cggcggcgac
     2341 ccgcgccgcc gccgcgtcga gcgcggcgac ctacccctcg tcgccgacgc gccgatagtg
     2401 gagggagatg ctccagatct tgtcctcgac cgaggcgccg gccacgcgcg ccgcggccgg
     2461 cgcgagcgcg cgggcggccg ccgcgatcgc cggcgcccag ggcgcgacgc gcgggtccac
     2521 gctggtcgcg ccgtcggggg cgacgacctc ggcgccatgg ttgccgatca cccagaggtg
     2581 gtcgagggcg acgatgcgcg ccgcgtcggc cgcgccccgt ccggagacga cggcgagtcg
     2641 cgtgtcggag cgcgcggcga gcgcggccag cacgcggcgc gtcgcctcgg gcaccgcggc
     2701 gtcctccggg ttcgggacga tcggggcgat cgtgccgtcc acgtcgaggg cgatcaggag
     2761 gggcgcaccg ggcgcgcgcg cggcgacgag tcgctcgtgc agcgtgtcga tgagcgccgc
     2821 ggggagcgcg cccggcgcgg tgccccgcga gccggagtcg atcacgccgg ggaaggggcc
     2881 ggcgcggcgt cgagcagggt ctcgacgcgc gagaggatgt cgtcgagcca gccgaagatc
     2941 gtcgccccct ggagctgttc tcgcatgccg cgcatgcggc ggtggcgctc ctcgtctgg
//
LOCUS       DASSYW010000957         2545 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1151899, whole genome shotgun sequence.
ACCESSION   DASSYW010000957 DASSYW010000000
VERSION     DASSYW010000957.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2545)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2545)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2545
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1151899"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1863
                     /locus_tag="VFN38_15105"
     CDS             <1..1863
                     /locus_tag="VFN38_15105"
                     /inference="COORDINATES: protein motif:HMM:NF039587.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5916 domain-containing protein"
                     /protein_id="HET9013152.1"
                     /translation="SKGEVTRDGYVIEVRIPFKSVKYQSADVQSWGLNVVREVQHSGH
                     EDSWAPARRAGLSFLAQSGVLEGLTGLRRGLVLDVNPEATQRTPGSPPAGPPTGWQYA
                     AGRPELGGNVRWGISNNLTLNGTVNPDFSQIESDAGQFVFDPRQALFFQEKRPFFLDG
                     IEQFTTPHSLIYTRTVVQPVGAVKLTGKLSGTNVAFLSAVDDVIGSASRTDHPVFNIL
                     RVQRDVGAGSKVGVAYTDRVDGSAYNRVADVDGTYLFGGIYSLQTQYAASFTKQPDGR
                     VLNAPLWHAGVNRNGKHFAFSYALDGVHEDFRTASGYINRCGVVNGNLDQRYTWFGAP
                     GAMVEALTFNPGYFSTWRYQSFVHQDDAIEKKLHLTLNATVRGGWNAGVGYFVETFGF
                     DPGLYASYRLADASGARLPFTGVGRIPNSEAFISFATPAGKRISANAFYLWGRDENFF
                     EWASSNIVIGQYGLNFRPTDRLRAEATYNLQSFNRRTDGSIVGNNRIPRLKVEYQIAR
                     PVFVRLVGEYQSLYRDALRDVGRTELPIVTYDACAGYAYQQTVACQRSSFRGDFLFSY
                     QPNPGTVVFLGYGAGYADARPLAEPFEFPRSFGLRGYDRTDDAFFVKASYLFRL"
     gene            1874..>2545
                     /locus_tag="VFN38_15110"
     CDS             1874..>2545
                     /locus_tag="VFN38_15110"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HET9013153.1"
                     /translation="MTDAARSAPMAADAAHETILPRALGLRDLVLFNLVAVVGLRWLA
                     TAGKAGPSALVLWLLAAVFFFVPQGLVVTELSSRFPQEGGIYQWTKRALGEKHGYLCG
                     WCYWVCNVLYYPNLLISSAVIATFVVGKGESGLADSWTYVLTATLLCLWLAVLLNIVG
                     LGTGKWLQNAGGIGTYIPGVILILLGGYAAVTGHASANPVTRTNIMPDLGHLPGLNLW
                     ASIAFA"
BASE COUNT          392 a          874 c          859 g          420 t
ORIGIN      
        1 tcgaagggcg aggtgacgcg cgacggctac gtcatcgaag tgcgcatccc gttcaagagc
       61 gtgaagtacc agtccgcgga cgtccagagc tgggggctca acgtcgtgcg ggaggtgcag
      121 cattcagggc acgaggacag ctgggcgccg gcgcgccgcg ccgggctctc gttcctcgcg
      181 caatcgggag tgctcgaggg attgacgggc ctgcgccgcg gtctcgtgct cgacgtcaat
      241 ccggaggcga cgcagcggac gccagggtcg ccgccagcag ggccgcccac gggatggcag
      301 tacgcggcgg gccgtcccga gctcggcggc aacgtgcggt gggggatcag caacaacctg
      361 acgctcaacg gcacggtcaa tccggacttt tcgcagatcg aatccgatgc cgggcagttc
      421 gtgttcgacc cgcggcaggc gctcttcttc caggagaagc gacccttctt cctggacggc
      481 atcgagcagt tcacgacgcc ccattcgctg atctacacgc gaacggtggt gcagccggtg
      541 ggcgcggtga agctgacggg caagctgtcc ggcaccaacg tcgccttcct cagcgcggtg
      601 gacgacgtca tcggctccgc gtcgcgcacc gatcatccgg tgttcaacat cctgcgcgtg
      661 cagcgcgacg ttggtgccgg ctccaaggtc ggcgtcgcct acaccgatcg cgtggacggc
      721 tcggcctaca accgcgtcgc cgacgtggac ggcacgtacc tgttcggcgg gatctacagc
      781 ctccagaccc agtacgcggc gagcttcacg aagcagccgg atgggcgggt cctcaatgcg
      841 ccgctctggc acgccggcgt caaccgcaac gggaagcact tcgccttcag ctacgcgctg
      901 gacggcgtgc acgaggactt ccgcacggcc agcggctaca tcaatcgctg tggggtggtg
      961 aacggcaacc tggaccagcg ctacacctgg ttcggcgcgc ccggcgcgat ggtcgaggcg
     1021 ctgacgttca accccgggta cttcagcacg tggcgctacc agagcttcgt ccaccaggac
     1081 gacgccatcg agaagaagct gcacctcacg ctgaacgcca ccgtgcgcgg ggggtggaac
     1141 gcgggggtcg gctacttcgt cgagaccttc ggcttcgacc ccggcctgta cgcgagctac
     1201 cggctcgccg acgcgtcggg cgcccggctc ccgttcacgg gcgtgggacg gatcccgaac
     1261 agcgaagcgt tcatctcgtt cgccacgccg gcgggcaagc ggatctcggc gaacgcgttc
     1321 tacctctggg ggcgcgacga gaacttcttc gagtgggcgt cgtcgaacat cgtcatcggc
     1381 cagtacggtc tcaacttccg gcccacggac cgcctgcgcg ccgaggcgac gtacaacctc
     1441 cagagcttca accgtcgcac cgacgggagc atcgtcggca acaaccggat cccgcgactg
     1501 aaggtggaat accagatcgc gcggccggta tttgtacgcc tcgtgggcga ataccagtcg
     1561 ctctatcgcg acgcgttgcg tgacgtcggc cgcaccgagc tgccgatcgt cacgtacgac
     1621 gcctgcgccg gctacgccta tcagcagacg gtggcctgcc agcggagcag cttccgcggc
     1681 gacttcctct tctcgtacca gcccaatccg gggacggtgg tcttcctcgg ctacggcgcc
     1741 ggctacgccg acgcccgccc gctcgcggag ccgttcgagt ttccgcgcag cttcggcctc
     1801 cgcggctacg atcgcaccga cgacgccttc ttcgtgaagg cgagctacct gttccgactc
     1861 tgaccccgga tcgatgacgg acgccgcgcg cagtgccccc atggccgccg acgcggcgca
     1921 cgagacgatc ctgccgcgcg ccctggggct gcgcgacctc gtgctgttca acctcgtggc
     1981 cgtggtgggg ctgcgctggc tggcgacggc cgggaaggcg gggccgagcg cgctcgtgct
     2041 ctggctgctg gcggcggtgt tcttcttcgt gccgcagggg ctcgtggtca ccgagctgtc
     2101 gtcgcgcttt ccgcaggagg gcgggatcta ccagtggacc aagcgcgcgc tcggcgagaa
     2161 gcacgggtat ctgtgcggct ggtgctactg ggtgtgcaac gtcctctact atcccaacct
     2221 gctcatctcg tccgccgtga tcgcgacctt cgtcgtcggg aagggcgaga gcgggctggc
     2281 ggacagctgg acgtacgtgc tcaccgcgac cctcctctgt ctgtggctcg cggtgctgct
     2341 caacatcgtg gggctgggca ccggcaagtg gctgcagaat gccggcggca tcgggacgta
     2401 catccccggc gtgatcctca tcctgctcgg cggctatgcc gcggtcaccg gccatgcgtc
     2461 ggcgaatccg gtcacgcgca cgaacatcat gcccgacctc gggcacctgc cggggctcaa
     2521 cctctgggcg tccatcgcct tcgcc
//
LOCUS       DASSYW010000958         4193 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1759622, whole genome shotgun sequence.
ACCESSION   DASSYW010000958 DASSYW010000000
VERSION     DASSYW010000958.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4193)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4193)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4193
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1759622"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..202
                     /locus_tag="VFN38_15115"
     CDS             <1..202
                     /locus_tag="VFN38_15115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013154.1"
                     /translation="VLLIAQAIREVGPKRERIRDWLADLGHGHAAVPGITGPLAFPTV
                     GDRAATYVLVTAGAARTAPAAR"
     gene            251..2248
                     /locus_tag="VFN38_15120"
     CDS             251..2248
                     /locus_tag="VFN38_15120"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HET9013155.1"
                     /translation="MSALLVAAAAAAAMLIAFSLAVSQRNEMDRDTSAFLSEQHIADQ
                     IVALTYRQQLEAFRYLERRDDARLREFRALGEEAYSQMRRYLFHELSPAARLQVERMK
                     ETHQGFEVVAQRVFELAQRGQSDAARRRLVDLDARVAALDTAVDQFLGARFAQRADFQ
                     RRHAAVSRRVGIGLASAAALLFILLVLLAGYLRGRVLAPLDALAEAAGRLGAGDLDAR
                     VAAQRYAEFNDVASGFNRMADNVQSARETMEAQNEEIRQTLDHLQQTQAELVQHEKLS
                     AMGQMLAGLAHELNNPLAGVLGMAELLRSELAESEHEDVRAMATTLAEPLEREALRAR
                     SLVRNLLNFARRPSGVVEPVDLTAAVSTALGLCAHSFAQAGKTLRVDLRPHLRVMADA
                     QKLQHAIVNVVNNALDAVIAGDGRGLIIVGTPVGRHMVRLDFEDDGTGFADPASALQP
                     FYTTKAAGKGTGLGLSLVEQFVNEFGGTVTVSNRAEGGARVSLLLRAGDDDAALAGAH
                     VARSRAATEESRSAANDTPTSPPPSDAAAAAPTQPRVLVVDDEPTLRLIQHRLLSNAG
                     MHVVLAANGADAREALQRESFDLVISDLRMPGEMDGRELLAWLARERPALAERSLLLT
                     GDMGGVASAPLPVPLERVVPKPFSSVDYVRRVREALAVGTE"
     gene            complement(2312..>4193)
                     /gene="topA"
                     /locus_tag="VFN38_15125"
     CDS             complement(2312..>4193)
                     /gene="topA"
                     /locus_tag="VFN38_15125"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003917 - DNA topoisomerase type I (single
                     strand cut, ATP-independent) activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HET9013156.1"
                     /translation="LDRLVGYKASPVLWKTVKKGISAGRVQTVALRLIVEREREIRAF
                     KPVEYWTVEALLEKAGQRFTAKLHQIDGHKAEIHNKVEADRVLGDLAGRTSFGVTEVK
                     RRERRKNPSAPFTTSTLQQEAAKKLSFGSKRTMRIAQDLYEGIDIGPEGAVGLITYMR
                     TDSTRVAESAATHAQDYLRVLFGGEYLAKGLQLYGNGKAKNTQDAHESVRPTDPTRRP
                     DDIRKHLSPDQFKLYQLIWQRFMASQMAPAIFDTTTVDFDIAAREQPQIGRRSYLFRS
                     TGSIIKFPGFLALYREAREEGDSKALEDEQALPVVDVGENVPVQSITPSQHFTEPPPR
                     FSEASLVKELERLGIGRPSTYASIISVLADRRYVNLEQRRFFPTELGETVEKVMIKQF
                     PDIFNVGFTSGMELELDKVEEGELGWRRVLQDFWGPFDKSLKDVKLGALIAEAHDLSA
                     IANERCKECGGKLEPRGGFFGPFLACENHPKNCSYTRPLKGEKAKPKMTDIPCHLCGA
                     PMVVRQGRSGEFLGCSTFPKCRGTRSMPTGVFCPKDGGELVERRSKKRGTAFYACSNE
                     TCDFVAWNKPVAETCPECGNVGAEMKFTKARGDFRKCLKCGNEWDVAPAPDAVEPAAV
                     AS"
BASE COUNT          596 a         1484 c         1422 g          691 t
ORIGIN      
        1 cgtcctgctc atcgcgcagg cgattcgcga ggtgggtccc aaacgcgagc gcatccgcga
       61 ctggctcgcg gacctggggc atgggcatgc cgcggttccc ggcatcacgg gcccgctcgc
      121 gtttcccacc gtcggcgacc gcgctgcgac gtacgtgctc gtgaccgcgg gcgcggcgcg
      181 caccgccccg gccgcgcgct gacccgtgcg gcgagcactc agaaccccca gcctgcgtcg
      241 cacgctggtc atgagtgcgc tgctcgtcgc ggccgcggcg gcggcggcca tgctgatcgc
      301 gttctcgctg gcggtatcgc agcgcaacga gatggatcgc gacaccagcg ccttcctctc
      361 ggagcagcac atcgccgatc agatcgttgc gctcacgtac cggcagcagc tcgaggcgtt
      421 tcgctatctg gaacgccgcg acgatgcgcg cctgcgcgag ttccgcgcgc tcggcgagga
      481 ggcgtactcg cagatgcgcc ggtatctctt ccatgagctg tcccccgccg ctcggctcca
      541 ggtggagcgg atgaaggaga cgcaccaggg cttcgaggtg gtggcccaac gcgtgttcga
      601 gctcgcacag cgcgggcagt ccgacgccgc gcggcgccgc ctcgtggatc tcgacgcgcg
      661 tgtcgccgcg ctcgacacgg ccgtggacca gttcctcggc gcgcgcttcg cgcagcgcgc
      721 cgactttcag cgccgccacg cggcggtctc gcgtcgtgtc ggcatcggcc tcgcctccgc
      781 ggccgcgctg ctgttcatcc tcctcgttct cctggccggt tatcttcgcg ggcgcgtgct
      841 cgcgccgctg gatgcgctgg ccgaagcggc tggtcggctc ggcgccggcg acctggatgc
      901 gcgcgtcgcc gcgcagcgtt acgccgagtt caacgacgtg gcctccggct tcaaccgcat
      961 ggcggacaac gtgcagtcgg cgcgcgagac gatggaagcc cagaacgagg agatccgcca
     1021 gacgctcgac cacctccagc agacgcaggc ggagctcgtg cagcacgaga agctgagcgc
     1081 gatgggccag atgctcgccg gcctcgcgca cgagctcaac aacccgctcg ccggcgtgct
     1141 cggcatggcc gagctgctgc ggtccgagct cgcggagtcg gagcacgagg acgtgcgggc
     1201 catggccacc acgctcgccg agccgctcga gcgcgaggcc ctgcgggcgc ggtcgctcgt
     1261 gcgcaatctc ctgaacttcg cgcggcggcc gtcgggtgtg gtggagccgg tggatctcac
     1321 ggcggccgtg agcaccgcgc tcggcctctg cgcccattcg ttcgctcagg cgggcaagac
     1381 gcttcgcgtc gacctgcggc cgcacctgcg tgtgatggcg gacgcgcaga agctccagca
     1441 cgcgatcgtc aacgtcgtca acaacgcgct cgacgcggtg atcgccggcg acggccgcgg
     1501 tctgatcatc gtcggaacgc cagtgggccg tcacatggtc cgcctcgatt tcgaggacga
     1561 cggcaccggg ttcgccgatc cagcctcggc gctgcaaccc ttctacacga ccaaggcggc
     1621 cggcaagggc accggactcg gactctcgct cgtggagcag ttcgtcaacg agttcggcgg
     1681 gacggtcacg gtgagcaatc gggccgaagg cggggcgcgt gtgtcgcttc tgctgcgcgc
     1741 gggagacgat gacgcggccc tcgcgggcgc ccacgtcgcc cgttcgcgcg cggccaccga
     1801 ggagtcacgc tcggccgcga acgacacgcc cacctcgcct ccgccgtcgg acgccgctgc
     1861 cgccgcgccg acgcagccgc gcgtgctcgt cgtggacgac gagcccacgc tccgcctgat
     1921 ccagcatcgg ctgctctcga acgccggcat gcacgtcgtg ctggcggcga acggcgctga
     1981 cgcgcgggag gcgttgcagc gcgagtcgtt cgatctcgtg atctccgacc tgcgcatgcc
     2041 gggggagatg gacggtcgcg agctgctcgc ctggctcgcg cgggagcgtc ccgcgctcgc
     2101 cgaacgatcg ctgctgctca ccggcgacat gggcggcgtg gcctcggcgc cccttcccgt
     2161 cccgctggaa cgcgtcgtcc ccaagccgtt cagcagcgtc gactacgtgc gccgcgtccg
     2221 ggaggccctc gccgtcggga cggaatgaac gagggccgcc gcgctgttct cgcgcgacgg
     2281 ccctccgagg aagaaagcga cgcggacggt ctcagctcgc gaccgccgcc ggctccacgg
     2341 catccggcgc gggggcgaca tcccattcgt tgccgcactt caggcacttc cggaaatcac
     2401 cacgcgcctt ggtgaacttc atctcggcgc cgacgttccc gcactccggg caggtctcgg
     2461 ccaccggctt gttccacgcc acgaagtcgc acgtctcgtt gctgcaggcg tagaaggccg
     2521 tgccccgctt cttggagcgg cgctccacca gctcgccgcc gtccttcgga cagaagacgc
     2581 cggtgggcat ggagcgcgtg ccgcggcact tcggaaaggt gctgcatccg aggaactcgc
     2641 cgctgcgtcc ctgtcgcacc accatcggcg ctccgcacag gtgacagggg atgtccgtca
     2701 tcttgggctt cgccttctcc cccttgagcg gacgcgtgta gctgcaattc ttgggatggt
     2761 tctcgcaggc caggaaggga ccgaagaagc cccctcgcgg ctcgagcttg ccaccgcatt
     2821 ccttgcagcg ctcgttcgcg atggccgaca ggtcgtgcgc ctcggcgatg agcgcgccga
     2881 gcttcacgtc cttgagcgac ttgtcgaacg gtccccagaa atcctggagc acccgccgcc
     2941 agcccagctc tccctcctcc accttgtcca gctccagctc catcccggag gtgaaaccga
     3001 cgttgaagat gtcggggaac tgcttgatca tcaccttctc gaccgtctcc ccgagctcgg
     3061 tggggaagaa gcggcgctgt tcgaggttca cgtaccgccg atcggcgagc acgctgatga
     3121 tgctcgcgta cgtggacgga cggccgatgc ccagccgttc cagctccttg acgaggctcg
     3181 cctcggagaa ccgcggcggc ggttccgtga aatgctgcga cggcgtgatc gactgcacgg
     3241 gcacgttctc cccgacgtcg acgacgggca gagcctgctc gtcctcgagc gccttggagt
     3301 cgccttcctc gcgcgcctct cgatagagcg cgagaaagcc ggggaacttg atgatgctgc
     3361 cggtggatcg gaacagatac gaccggcgcc cgatctgcgg ctgctccctg gctgcgatgt
     3421 cgaagtcgac ggtcgtcgtg tcgaagatcg ccggcgccat ctgcgacgcc atgaaccgct
     3481 gccagatgag ctgatagagc ttgaactgat cgggcgagag atgcttgcgg atgtcgtccg
     3541 gacggcgcgt cgggtcggtg ggacgcacgc tctcgtgcgc gtcctgcgtg ttcttcgcct
     3601 tgccgttgcc gtagagctgg aggcccttgg cgagatactc gccgccgaac agcacgcgca
     3661 ggtagtcctg cgcgtgcgtg gctgcgctct cggcgacgcg cgtggagtcg gtgcgcatgt
     3721 acgtgatgag accgaccgcg ccttccggcc cgatgtcgat cccctcgtag agatcctgcg
     3781 cgatgcgcat cgtgcgcttg gagccgaacg agagcttctt cgccgcctcc tgctggagcg
     3841 tggaggtcgt gaacggcgcc gagggattct tgcgacgctc gcgacgcttg acctccgtga
     3901 cgccgaacga cgtgcggccg gcgagatcgc cgaggacgcg gtccgcttca accttgttgt
     3961 ggatctccgc cttgtggccg tcgatctggt ggagcttcgc cgtgaagcgc tgccccgcct
     4021 tctcgagcag cgcctcgacg gtccagtact ccacgggctt gaaggcgcgg atctcccgct
     4081 cgcgctcgac gatgagccgc agcgcgacgg tctgcacccg accggcggag atgcccttct
     4141 tcaccgtctt ccagaggacg gggctcgcct tgtacccaac caaccgatct aga
//
LOCUS       DASSYW010000959         2733 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_709310, whole genome shotgun sequence.
ACCESSION   DASSYW010000959 DASSYW010000000
VERSION     DASSYW010000959.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2733)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2733)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2733
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_709310"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..356
                     /locus_tag="VFN38_15130"
     CDS             <1..356
                     /locus_tag="VFN38_15130"
                     /inference="COORDINATES: protein motif:HMM:NF013633.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="S4 domain-containing protein"
                     /protein_id="HET9013157.1"
                     /translation="GEEAARVAREISGLLFGGADPATLGVATFAALRREVPFAELPAM
                     PPGPGLDPLDLLVATELVASRGAAKRLLEQGGVYVNGRRVTAADRFVSAEQLLPGGHV
                     LLRKGARDYGLVRVR"
     gene            498..1787
                     /locus_tag="VFN38_15135"
     CDS             498..1787
                     /locus_tag="VFN38_15135"
                     /inference="COORDINATES: protein motif:HMM:NF016648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FecR domain-containing protein"
                     /protein_id="HET9013158.1"
                     /translation="MSTTPTTSSDRPSPGGPRWDDERALERVFRESYPTLAKEAATEL
                     EGNGPASTVVSRAFLRAWSERDHLATPEALDSFLHRAVHDVAVREKYRRAVLHHMQEH
                     APTHGTNHTHAATHAPPAESVDAAWAEVSAALHSPAITDATEARHALSRHGTAEHVAH
                     LAERRRPWGAWAIALLAAAALAVGARVIGRSSAEVVTEKALASADARILFSGSGQRAL
                     VALVDQSKATLGPNSRLIIPPGFGTKLRTVRLEGTASFDVAPGQELPFAVRAGNATVT
                     ALGTTFDVAADTGSAVVMVRARTGRLQLSSPSETRTMEPGQALMVARDGSIAAPAATA
                     LASTLGWTDGQLVVTDRPLREVLPLLRRWYALDLQVKDSALLDRRVTMAPALGVPRNA
                     IGALESAAGLALTWEGERMVLVDRSAKKPVKGRAKRR"
     gene            complement(1795..>2733)
                     /locus_tag="VFN38_15140"
     CDS             complement(1795..>2733)
                     /locus_tag="VFN38_15140"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HET9013159.1"
                     /translation="GATAREIALMVNTTYGLNLAARSLPLAAGDVVLGFDREFPANVY
                     PWMALERRAGVELRLLPCGAGRLPDEEALLRAIEREPRVKAVTLSWVSFATGYRVDLE
                     RIGAACRERGIYFVVDAMQGVGACTLDLSRLQVDILACGGQKWLMSPWGSGFVYVRDE
                     LLSRLEPSAVGWMSVRGSDDFERLVDYDFTYRDDARRFEVITLPFQEFAGLNASLELL
                     FELGPDAVEAHVASLADRIVRWAGSRSDVRLVTPGDRARRAGIVSLAPRDPAAASARL
                     TAAGVSHSLREGAIRLSPHCYNTVAEVDAALAELEG"
BASE COUNT          382 a         1014 c         1022 g          315 t
ORIGIN      
        1 acggggagga agcggcgcgc gtggcgcgcg agatctccgg gctgctcttc ggcggcgccg
       61 atccggcgac gctcggcgtg gcgaccttcg cggcgctgcg gcgcgaggta ccgttcgccg
      121 agctccccgc gatgcccccg ggccccgggc tcgacccgct cgacctgctc gtcgccacgg
      181 agctcgtcgc ctcgcgcggg gcggcgaaac ggctcctcga gcaggggggc gtgtacgtca
      241 acggccgccg cgtcaccgcg gcggaccgct tcgtgagcgc ggagcagctg ctgcccggcg
      301 gacacgtgct gctgcgcaag ggcgcgcggg actacgggtt ggtgcgggtg cgctaggccg
      361 cgcgcctccc tcccgcggtc cccccccgcg atgtgaggga attcgcttcc ggcgtcggag
      421 aaaacccgat tgtcgggggt cgtccccgga acgaaggttg ggccaacatc accggcccgc
      481 cggccgaagg aggcccaatg agcaccaccc cgaccacttc cagcgaccgc ccctcgcccg
      541 gcggcccgcg ctgggacgac gagcgcgccc tcgagcgcgt cttccgcgag agctacccca
      601 ccctcgcgaa ggaagcggcg acggagctcg aggggaacgg accggcgtcc accgtggtct
      661 cgcgggcctt cctccgcgcc tggagcgagc gcgaccacct cgcgacgccc gaggcgctcg
      721 acagctttct gcaccgcgcc gtgcacgacg tcgccgtccg ggagaagtac cgccgcgccg
      781 tcctgcacca catgcaggag cacgcgccga cgcacggcac caaccacacg catgcggcga
      841 cgcacgcgcc gccggccgag tcggtggacg cggcgtgggc ggaggtcagc gccgcgctgc
      901 acagtcccgc catcaccgac gccaccgagg cgcggcacgc cctctcgcgg cacgggaccg
      961 cggagcacgt ggcccatctc gccgagcggc gccgcccctg gggcgcgtgg gcgatcgccc
     1021 tcctcgccgc ggcggccctc gccgtcggcg ctcgggtgat cgggcgcagc agcgccgagg
     1081 tcgtgacgga gaaggcgctg gcgtcggcgg atgcccggat cctcttctcg ggctcgggac
     1141 agcgcgcgct cgtcgcgctc gtcgaccaga gcaaggcgac gctgggcccc aactcgcgtc
     1201 tcatcatccc gcccggcttc ggcaccaagc tgcgcaccgt gcggctggaa ggcacggcga
     1261 gcttcgacgt cgcccccgga caggagctgc cgttcgcggt ccgcgccggc aacgccacgg
     1321 tgaccgcgct cggcacgacg ttcgacgtcg cggcggacac cggcagcgcc gtcgtcatgg
     1381 tccgcgcgcg gacggggcgc ctgcagctct cgtcgcccag cgagacgcgg acgatggagc
     1441 ccgggcaggc actgatggtg gcgcgcgacg gcagcatcgc ggcgcccgcc gccaccgcgc
     1501 tggcctcgac gctcggctgg accgacggac agctcgtggt caccgaccgt ccgctgcgcg
     1561 aggtcctccc ccttctgcgc cgctggtacg cgctggatct ccaggtgaag gattcggcgc
     1621 tcctcgatcg ccgcgtgacg atggcgccgg cgctcggcgt gccgcgcaac gcgatcggcg
     1681 cgctggaaag cgccgcgggg ctcgccctca cctgggaagg tgagcggatg gtgctcgtgg
     1741 accggagcgc gaagaagccg gtgaaggggc gggcgaagag acgctaggcg tccctcagcc
     1801 ctccagctcc gcgagggccg cgtccacctc cgccacggtg ttgtagcagt ggggcgagag
     1861 gcggatggcg ccctcgcgga gcgagtgcga cacgccggcg gcggtcaggc gggccgaggc
     1921 ggcggcgggg tcgcgcgggg cgagggagac gatgccggcg cgccgcgccc gatcgcccgg
     1981 cgtgacgagc cgcacgtcgc tccgcgaccc ggcccagcgc acgatccggt cggcgagcga
     2041 cgcgacgtgc gcctcgacgg cgtcgggccc gagctcgaag agcagctcga ggctcgcgtt
     2101 gaggcccgcg aactcctgga acgggagggt gatcacctcg aagcggcgag cgtcgtcgcg
     2161 gtaggtgaaa tcgtagtcca cgaggcgctc gaagtcgtcg gagccgcgga cgctcatcca
     2221 ccccacggcg ctcggctcga ggcgcgacag cagctcgtcg cggacgtaga cgaagccgct
     2281 gccccagggg gacatcagcc acttctggcc gccgcaggcg aggatgtcca cctgcaggcg
     2341 cgagagatcg agcgtgcacg cgccgacgcc ctgcatcgcg tccaccacga agtagatgcc
     2401 gcgctcgcgg caggcggcgc cgatgcgctc gaggtccacc cggtagccgg tggcgaagga
     2461 gacccaggag agggtgaccg ccttcacgcg cggctcccgc tcgatggcgc gcagcagcgc
     2521 ctcctcgtcg ggaaggcgcc ccgcgccgca cggcagcagc cggagctcga caccggcgcg
     2581 gcgctcgagc gccatccacg gatagacgtt cgccgggaac tcgcggtcga aaccgagcac
     2641 gacgtcgccg gcggcgagcg ggagggagcg cgcggcgaga ttgaggccgt acgtcgtgtt
     2701 caccatcagg gcgatctcgc gcgccgtcgc gcc
//
LOCUS       DASSYW010000960         3039 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1377269, whole genome shotgun sequence.
ACCESSION   DASSYW010000960 DASSYW010000000
VERSION     DASSYW010000960.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3039)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3039)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3039
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1377269"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..344
                     /locus_tag="VFN38_15145"
     CDS             <1..344
                     /locus_tag="VFN38_15145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013160.1"
                     /translation="RASRQRAPDTFACDRNNLTVYTGVVRTYQRRAGSTTLQIRTDFD
                     TTEQVTVRHPGTDDPSAHFRMLGEPFTAADWNRIEVKKGVLRDGTRAAAWVCSDGRVM
                     VDWGVLSDTRE"
     gene            complement(380..1159)
                     /locus_tag="VFN38_15150"
     CDS             complement(380..1159)
                     /locus_tag="VFN38_15150"
                     /inference="COORDINATES: protein motif:HMM:NF025068.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc metalloprotease"
                     /protein_id="HET9013161.1"
                     /translation="MRPDGLGPQLVCGTPHPDPETVRLVEEYTLRRRDISAQLTASPV
                     IPVYVHVIHNSNGSGGATNTQINNQMQVLNAAYAASGFSFQLQSVDHTNNGTWYTCSG
                     GACETAMKNALHQGGSNALNIYLNNMGGGLLGWATFPWQYASSPTMDGVVVLTASLPG
                     GSAAPYNLGDTATHEVGHWLGLYHTFQGGCNGQGDGVSDTPAEKSPAFGCPVGRDSCV
                     GKRTPGQDPIDNFMDYTDDACMDTFTAGQDSRMTTMWSSYR"
     gene            complement(1413..>3039)
                     /locus_tag="VFN38_15155"
     CDS             complement(1413..>3039)
                     /locus_tag="VFN38_15155"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HET9013162.1"
                     /translation="GRWHYSDATVDAGRGRLICVREDHTEEGRECVNARVAVAVDGSS
                     GAGRVLAEGYDFYSTPRLSPDGAQLAWICWRHPNMPWDGTELWMAGVAADGSLANPRR
                     VAGSDTESIYQPGWSPSGELLYVSDREDRWRLYRSRRSLDRPQRPDEPVQPSPPDDAE
                     VGRPQWILGTVTWAFATPSRLVVSYTREGRWFLGCADLDTGVFRNLAPGVEPGPYLAP
                     IGREVVFVAGSGTAFDSVVALDLETGATRTLRTVPGTLVDEGFLSVPEPVWFPTANGQ
                     RAHLFYYPPRNRECTPLPGERPPLVVISHGGPIAAADSSLDYGIQFWTSRGFAVADVN
                     YGGSTGFGREYRRRLNGQWGIVDVVDCIRATEFLVREGKADPARLIIRGGSAGGFTTL
                     AALTGYPDVFKAGASYFGVSDLEALARDSHKFEARCLDILVGPYPAEKKLYDERSPIH
                     HVDRLQCPLILLQGLEDKVVPPNQSQMMADALRRKGRPVAYLTFEGEQHGFRKAENII
                     RALESELYFYGAVFGFEPADRIEPVPIENLPRR"
BASE COUNT          486 a         1029 c         1054 g          470 t
ORIGIN      
        1 agcgcgcgtc gcggcaacgc gctccggaca cgttcgcgtg tgatcgaaac aacctgacgg
       61 tctacaccgg cgtcgtcagg acctatcagc gccgcgccgg ctccaccacg cttcagatcc
      121 gcacggattt cgacaccacg gaacaggtca cggtgcggca tcccggcacc gacgatccgt
      181 cggcgcactt ccgcatgctg ggcgagccgt tcacggccgc cgactggaac cgcatcgaag
      241 tgaagaaggg tgtgctgcgg gacggcacgc gcgccgccgc gtgggtgtgc agcgacgggc
      301 gcgtgatggt ggactggggc gtgctgagcg atacgagaga gtagcgcccc ggccgggcca
      361 gggcgccacg gtcacacaat cagcgatacg acgaccacat cgtggtcatg cgcgagtcct
      421 gcccggcggt gaacgtgtcc atgcacgcgt cgtcggtgta gtccatgaag ttgtcgatcg
      481 ggtcctgccc cggggtcctc ttgccgacgc acgagtcgcg gcccaccggg caaccgaacg
      541 ctggcgactt ctccgccggc gtgtcgctca cgccatcgcc ctggccgtta cagccgccct
      601 ggaaggtgtg atacagcccc agccagtgac ccacttcgtg cgtggcggtg tcgccaaggt
      661 tgtagggcgc cgcgctgcca ccgggaagcg aggcggtcag aacgaccacg ccgtccatcg
      721 tcggcgacga ggcgtactgc caggggaacg tggcccagcc cagaagcccg ccgcccatgt
      781 tgttcaggta gatgttcagc gcgttcgagc cgccctggtg cagcgcgttc ttcatcgccg
      841 tttcgcaggc tccgccggag caggtgtacc aggtgccgtt gttggtgtgg tccacgctct
      901 ggagctggaa tgagaagccc gacgccgcgt aggccgcgtt caagacctgc atctggttgt
      961 tgatctgcgt gttcgtcgcc ccacccgaac cgttcgagtt gtgaatgacg tgaacgtaga
     1021 ccggaatgac ggggctcgcc gtgagctgcg ccgagatgtc acggcgcctc agcgtgtatt
     1081 cctcgacgag ccggaccgtt tcgggatccg gatgcggcgt gccgcacacg agctgcgggc
     1141 cgagcccgtc cggacgcatc ggcgggtccg gtatctgaac gacgcggtcg ccgctccgcc
     1201 cctgagcttc cgtcggggca cccatggatc cgatcaaagt ggccacggcc aacgtgagcg
     1261 ccgcgcaaaa ggcccagtag actgactttc tcatcgtgcc tcctgtccag ccggagagtg
     1321 taccggctga tcctttaggg atcaacgaca gaagggctgg gtccgaatgc ttctgtgcag
     1381 ggatgagcca acatgggccc aagcagcggg gcttagcgtc tcggcaggtt ctcgatcggc
     1441 accggctcga tgcggtcggc cggctcgaac ccgaacaccg cgccgtagaa gtacagctcg
     1501 gactcgaggg cccggatgat gttctcggcc ttgcggaagc cgtgctgctc cccctcgaac
     1561 gtgaggtagg ccaccggccg ccccttgcgc cgcagcgcgt cggccatcat ctgcgactgg
     1621 ttgggcggca ccactttgtc ttcgagcccc tgcagcagga tgagcggaca ctggagccga
     1681 tcgacgtggt gaatcggtga gcgctcgtcg tagagcttct tctccgcggg atacgggccg
     1741 acgaggatgt cgaggcagcg cgcttcgaac ttgtgcgagt cgcgcgccag cgcctcgagg
     1801 tcgctgacgc cgaagtagct cgcgccggcc ttgaacacgt cgggatagcc ggtgagcgcc
     1861 gcgagcgtcg tgaagccgcc ggcgctgccg ccgcggatga tcagccgcgc cgggtccgcc
     1921 ttcccctcgc gcaccaggaa ctcggtggcg cggatgcagt ccacgacgtc cacgatgccc
     1981 cactgtccgt tcaggcgccg gcggtactcg cggccgaagc cggtgctgcc gccgtaattc
     2041 acgtcggcga cggcaaagcc gcggctcgtc cagaactgga tgccgtaatc gagcgacgag
     2101 tcggcggcgg caatcggtcc gccgtgactg atgacgacga gcggcggccg ctcgccgggg
     2161 agcggcgtgc actcgcggtt ccgcggcggg tagtagaaga ggtgcgcgcg ctggccgttg
     2221 gccgtcggga accacaccgg ctcgggcacc gacagaaagc cttcgtccac gagcgtgccc
     2281 ggcacggtgc gcagcgtgcg cgtggcgccg gtctcgaggt cgagcgcgac caccgagtcg
     2341 aacgccgtgc cggagccggc gacgaacacg acctcccgtc cgatcggcgc caggtacgga
     2401 cccggctcga cgccgggcgc gagattgcga aaaacacccg tgtcgaggtc cgcgcagccc
     2461 aggaaccagc ggccctcgcg ggtgtaggaa acgacgagtc gcgacggggt ggcgaacgcc
     2521 caggtgaccg tgccgagaat ccactgcggg cgacccactt cggcgtcgtc tgggggcgac
     2581 ggttgcaccg gctcgtcggg ccgctggggc cggtctaaag accggcggct acggtacaaa
     2641 cgccagcgat cctcgcggtc gctgacatag agcagttcgc cgctgggaga ccagcccggc
     2701 tgatagatcg actcggtgtc gctgcccgcc acgcgacgcg ggttggccag cgagccgtcg
     2761 gccgccacgc cggccatcca cagttcggtg ccgtcccacg gcatgttggg atgtcgccag
     2821 cagatccacg cgagctgcgc gccgtccggg ctgaggcgcg gcgtggaata gaagtcgtaa
     2881 ccctccgcga gcacacggcc cgcgccgctg ctgccgtcga cggcgacggc cacgcgcgcg
     2941 ttgacgcact cgcgcccttc ctccgtgtgg tcctcgcgca cgcagatcaa gcggccgcgc
     3001 ccggcgtcca ccgtcgcgtc gctgtagtgc cagcgccct
//
LOCUS       DASSYW010000961         2326 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1322001, whole genome shotgun sequence.
ACCESSION   DASSYW010000961 DASSYW010000000
VERSION     DASSYW010000961.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2326)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2326)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2326
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1322001"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            107..409
                     /locus_tag="VFN38_15160"
     CDS             107..409
                     /locus_tag="VFN38_15160"
                     /inference="COORDINATES: protein motif:HMM:NF028007.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051219 - phosphoprotein binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HET9013163.1"
                     /translation="MLLATLDVVEGNVPHGMRFRIERPVAQLGRGVACDVCLLDDTVS
                     GSHATLMLRGTTWHLLDHASFNGTWVDGLRVQQCALPSECDLRLGGVTLRFRQVAP"
     gene            complement(406..843)
                     /locus_tag="VFN38_15165"
     CDS             complement(406..843)
                     /locus_tag="VFN38_15165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013164.1"
                     /translation="MVTPRGIGPVLAGTSIAALSAALGETLHPEYAPGASCGYVRATA
                     LPNGVFVMVDRDTVVRVDVRTGAARSAEGVGIGDREADVLTRYEGRVRVAPNKYTGPA
                     GHDLVVTTPPDTLHLMLFETNGRTVLRYRAGRRTAVNLVEGCA"
     gene            1165..1782
                     /locus_tag="VFN38_15170"
     CDS             1165..1782
                     /locus_tag="VFN38_15170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013165.1"
                     /translation="MRLSTMSARAVTATLLLATASACSSAGGLGSILGSVLGAGTGTG
                     TGNQVSGYVQGVDTRNRQIGIQQSNGQTIAVSYDNNTQVVYNNQNYPVTSLENGDQVT
                     LRVQQTQNGGYYTDVIQVDRSVSGPSTIQSGNVQLLEGYVRQVDQANGLFLLDASNGA
                     RVTVQLPQQVARNDLDRFRNLRVGDYTRLYGVYISNARVELRQFN"
     gene            complement(1775..>2326)
                     /locus_tag="VFN38_15175"
     CDS             complement(1775..>2326)
                     /locus_tag="VFN38_15175"
                     /inference="COORDINATES: protein motif:HMM:NF017015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HET9013166.1"
                     /translation="LSSEAYWAVDVPLQPSPVMTELERIIRELEHAHGGHPWHGPSRA
                     DVLADVTPEEAARRPSAQGHGIWALVLHMAAWTGEVARRVREGDKRLPAAGDWPQVPT
                     ASAAAWRDAVASLDAAHRDVVAALRERGPARLDERAGPADDLSAGGDVTYRVMLHGLA
                     QHDAYHTGQIALLKRLYRDSAAS"
BASE COUNT          354 a          804 c          834 g          334 t
ORIGIN      
        1 cacgacccct ccacactcgg acgcggtcgt ttcacgcgtg gcgccgccgg atgtcgcgcc
       61 ggttaccacc ccggtcccga agcggcgctc cgaacttccg ccacccgtgc tcctggccac
      121 gctcgacgtc gtggaaggca acgtgccgca cggcatgcgc ttccggatcg agcgacccgt
      181 cgcccagctc gggcgcgggg tcgcgtgcga cgtgtgcctg ctcgacgaca ccgtgtccgg
      241 ctcccacgcg acgctgatgc tgcgcggcac gacctggcac ctgctcgacc acgcgtcgtt
      301 caacggcacg tgggtcgacg ggctgcgcgt ccagcagtgc gcgctgccga gcgaatgcga
      361 cctgcggctc ggcggcgtga cgctgcgctt tcggcaggtc gcgccctagg cgcagccttc
      421 cacgagattc accgcggtgc gccgccccgc gcggtatcgc aggacggtgc gcccgttcgt
      481 ttcgaacagc atgaggtgga gcgtatccgg tggcgtcgtc acgacgagat cgtgaccggc
      541 gggaccggtg tacttgttcg gcgcgacgcg caccctgccc tcgtagcgcg tgagcacgtc
      601 ggcttccctg tcgccgatcc cgacaccctc ggccgatcgc gcggcgccgg tgcgcacgtc
      661 cacgcgtaca acggtgtcgc ggtccaccat cacgaacacc ccgttcggca gcgcggtggc
      721 gcgcacgtat ccgcagctcg cgccgggcgc gtactccgga tgcagcgttt cgccgagcgc
      781 ggccgacagg gcggcgatgg acgtgccggc gaggacgggg ccgatgcccc gcggcgtcac
      841 cacccatgcc gtggtggcac gctcgcgcgg ggtgctgtcg gaatgactgg gcgcagcggg
      901 cgtggacgga aatgcggcga caggcgcggt gtccgcgctc gtccgtgtgg cggccggcgc
      961 aggcctgtcc tccacccggc acgaagcgag aggaacgagc gcgacgagcg cgtatcgaag
     1021 cagcatgctg gagtaactgt gtgggggtgt gcggaatcga gcgcactcga gtgtgcgaga
     1081 agcaggccgc ggacaacacc gcattgccgg cgggtgaggc accgggattg ccttaacgaa
     1141 aggcaattcc aactcggagt accgatgcga ctctctacga tgtccgcgcg cgccgtcacg
     1201 gcgaccctgc tgctagcgac cgccagcgcc tgctcgtccg ccggcgggct cggcagcatt
     1261 ctcggcagcg tgctcggtgc cggcaccggc accgggacgg gcaaccaggt cagcggctac
     1321 gtgcaggggg tggacacccg caaccggcag atcgggatcc agcagagcaa cgggcagacg
     1381 atcgccgtct cgtacgacaa caacacccag gtggtctaca acaaccagaa ctatcccgtc
     1441 acgtcgctgg agaacggcga ccaggtgacg ctgcgcgtgc agcagacgca gaatggcggc
     1501 tactacacgg acgtcatcca ggtggaccgt tccgtcagcg gaccgagcac catccagtcg
     1561 ggcaacgtgc agctgctcga gggatacgtg cgacaggtcg accaggccaa tgggctgttc
     1621 ctgctggacg cgtcgaacgg tgcgcgggtg acggtgcagc tgccgcagca ggtggcgcgc
     1681 aacgatctgg accgcttccg caaccttcgc gtgggcgact acacgcgcct gtacggcgtg
     1741 tacatcagca acgcgcgcgt ggagctgcga cagttcaact agcggccgag tcgcggtaca
     1801 gtcgcttgag caacgcgatc tgtcccgtgt gatacgcgtc gtgctgcgcc agcccgtgca
     1861 gcatgacgcg gtaggtcacg tcgccgccgg cggagaggtc gtccgccgga ccggcgcgtt
     1921 cgtccagccg cgcggggccg cgctcgcgca acgcggcgac cacgtcgcga tgcgcggcgt
     1981 cgagcgaggc gacggcatcg cgccacgcgg ccgcgctcgc ggtgggcacc tgtggccagt
     2041 cacccgcggc gggcaggcgc ttgtctccct cgcggacgcg acgcgcgacc tcgccggtcc
     2101 acgccgccat gtggagcacg agcgcccaga tgccgtgtcc ctgcgcgctg ggtcttcgcg
     2161 cggcttcctc cggggtcacg tcggcgagga cgtccgcgcg cgaggggccg tgccaggggt
     2221 ggccgccatg ggcgtgctcc agctcccgga tgatgcgctc gagctccgtc atgacgggcg
     2281 atggttggag ggggacgtcg acggcccaat atgcctcgga ggagag
//
LOCUS       DASSYW010000962         2094 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1675483, whole genome shotgun sequence.
ACCESSION   DASSYW010000962 DASSYW010000000
VERSION     DASSYW010000962.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2094)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2094)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2094
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1675483"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(12..368)
                     /locus_tag="VFN38_15180"
     CDS             complement(12..368)
                     /locus_tag="VFN38_15180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013167.1"
                     /translation="MKVRLVDLAHARSGDKGDTANVGVIALKPEWYPLIREQLTLDRV
                     RTHFKGVITGDVERFELPNLNALNFLLHGALDGGGTLSLKTDAQGKVFSTAMLRMTLD
                     VPAERARALGLPAARP"
     gene            complement(365..1747)
                     /locus_tag="VFN38_15185"
     CDS             complement(365..1747)
                     /locus_tag="VFN38_15185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyclic terpene utilization AtuA family protein"
                     /protein_id="HET9013168.1"
                     /translation="MSAASRKADRIVRVASGQGFWGDWLDAPRRQVEGGPVDYLMLDY
                     LAEVTMSILQKQKERDPSMGYARDFIGAMESVLPAVVDRGVKVIANAGGVNPVACARA
                     VLEVARKAGAAGKVRVGVVTGDDLLPRLDELIASGHSLTHMETGEPLSTVRDRVLSAN
                     AYIGSTPIVEALAKGANVVVTGRSTDTALTMAPLRHEFGWGATDWDLLAAGIIAGHII
                     ECGAQCSGGNCLYDWRNIPDLANVGYPIVEARADGTFTVVKHPNTGGRINVPSITEQC
                     VYEMGDPHSYITPDVVADFTTIHLADDGPDRVRVHGIKGRPATDKLKVSIAYRAGFKA
                     VGTLVYAWPDAMDKAQLADRVLRERLDNMGLTFDQLLTEYVGVSATHGPLADASGEAQ
                     EVQLRIGARSADRRSIERFTREIAPLVLNGPPSVTGFAGGRPKVEEIVAYWPALVDKT
                     VVQTKVEVLS"
     gene            complement(1744..>2094)
                     /locus_tag="VFN38_15190"
     CDS             complement(1744..>2094)
                     /locus_tag="VFN38_15190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HET9013169.1"
                     /translation="YAMAGQGFDPDFIFSWPTGRMAVMEGESAIQAVHGPSIAKAAAE
                     QRPLDADTQRAVDEMRADYEHQLDARYAAARGYVDAIVYPEETRDVLAHALRASLCNP
                     GPHLGPFVLPPSAP"
BASE COUNT          299 a          722 c          744 g          329 t
ORIGIN      
        1 ccggacgcgt gtcacggccg cgccgcggga agacccaggg cgcgcgcccg ctcggccggc
       61 acgtccagcg tcatgcgcag catggcggtg gagaacacct tgccctgggc gtccgtcttc
      121 agcgagaggg tgccgcctcc atcgagcgcg ccgtgcagca gaaagttcag cgcgttgagg
      181 ttgggcagct cgaatcgctc gacgtcgccg gtgatgacgc ccttgaagtg cgtccgcacc
      241 cgatccaggg tgagctgttc gcggatgagc gggtaccatt ccggcttcag cgcgatgacg
      301 ccgacgttcg ccgtgtcgcc cttgtcgccg gagcgggcgt gggcgaggtc caccaggcgg
      361 accttcatga cagcacctcc accttcgtct gcaccaccgt cttgtcgacg agcgcgggcc
      421 agtacgccac gatctcctcg accttggggc gaccgccggc gaagccggtg acgctcggcg
      481 ggccgttcag cacgaggggc gcgatctcgc gcgtgaaccg ctcgatcgaa cgtcggtcgg
      541 ccgagcgtgc gccgatgcga agctgcacct cctgcgcctc gccggaggca tcggcgaggg
      601 ggccgtgcgt ggcgctcacg cccacgtact cggtgagcag ctggtcgaac gtcagcccca
      661 tgttgtccag ccgctcgcgc agcacgcgat cggccaactg cgccttgtcc atcgcgtcgg
      721 gccaggcgta gacgagcgtg cccaccgcct tgaagccggc gcggtaggcg atcgagacct
      781 tgagcttgtc ggtcgccggc cgccccttga tgccgtgcac gcgcacgcgg tccggtccgt
      841 cgtcggcgag gtggatcgtc gtgaagtcgg cgacgacgtc cggcgtgatg tagctgtgcg
      901 gatcgcccat ctcgtacacg cactgctccg tgatcgacgg gacgttgatg cggccgcccg
      961 tgttcgggtg ctttacgacg gtgaaggtgc cgtcggcgcg cgcttcgacg atcggatagc
     1021 cgacgttcgc gagatcgggg atgttccgcc agtcgtacag gcagttgccg ccggagcact
     1081 gcgcgccgca ttcgatgatg tgccccgcga tgatcccggc ggcgagcagg tcccagtcgg
     1141 tggcgcccca gccgaactcg tggcgcagcg gcgccatggt gagcgccgtg tcggtggagc
     1201 ggcccgtcac gacgacgttg gcgcccttgg ccagcgcctc gacgatgggc gtggagccga
     1261 tgtaggcgtt ggccgacagg acgcggtcgc gcaccgtgct gagcggctcg ccggtctcca
     1321 tgtgcgtcag gctgtggccc gacgcgatca gctcgtcgag ccgcggcagc aggtcgtcgc
     1381 ctgtcacgac gccgacccgc accttccccg cggcgccggc cttgcgcgcc acctcgagca
     1441 cggctcgggc acacgcgact ggattcacgc cgccggcgtt ggcaatcacc ttcaccccgc
     1501 gatccacgac ggcggggagc acgctctcca tcgccccgat gaagtcgcgc gcgtagccca
     1561 tcgacggatc acgctccttc tgcttctgca gaatggacat cgtgacctcg gcgaggtagt
     1621 cgagcatgag atagtccacc gggccgccct ccacctggcg gcgcggggcg tcgagccagt
     1681 cgccccagaa gccctggcca ctggcgacac ggacgatgcg atcagccttg cgtgaggcgg
     1741 cgctcatggt gcactcgggg gaagaacgaa tgggccgagg tggggcccgg gattgcagag
     1801 cgaagcgcgg agcgcgtgag ccagcacgtc gcgcgtctct tcgggataga cgatcgcatc
     1861 gacgtagccg cgcgccgcgg cgtagcgggc gtcgagctga tgctcgtagt cggcccgcat
     1921 ctcgtccacg gcgcgctggg tgtcggcgtc gaggggccgc tgctccgcgg cggccttcgc
     1981 gatggacggg ccgtgcacgg cctggatggc gctctcgccc tccatcaccg ccatgcgccc
     2041 cgtgggccac gagaagatga agtcgggatc gaacccctgc cccgccatgg cgta
//
LOCUS       DASSYW010000963         2210 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_801924, whole genome shotgun sequence.
ACCESSION   DASSYW010000963 DASSYW010000000
VERSION     DASSYW010000963.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2210)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2210)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2210
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_801924"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..444
                     /locus_tag="VFN38_15195"
     CDS             <1..444
                     /locus_tag="VFN38_15195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013170.1"
                     /translation="HHMPRRLVAAIAVAALLPVAAMAQSQSSTDITMTGCVSAKPDAK
                     GRYTFENADGVSRYQLTGRKLAKFAGQRVELVGASPGGGGVAVRGGLVGPQAGARGVA
                     LDPSQESVRRQPGGGGAGIGPSYPEFKVSKVKTVTGGCDEPPPVR"
     gene            complement(446..1279)
                     /locus_tag="VFN38_15200"
     CDS             complement(446..1279)
                     /locus_tag="VFN38_15200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013171.1"
                     /translation="MPTHFRRTIAVAALCVAASLTANAQWLHTPTAGAPRTRDGKVNM
                     TGPVPRLDGKPDLSGIWQVPGDPRAAGGLFGLGESLNSKYFRDILSDFPPDQRPLTAE
                     GAERLRRNAQPGVFNPVLNCLPDGPVHGDLLPEPFKFIHSRGVIVMLYEVETTFRQIF
                     MDGRALPKEIGSPSWQGYSVGRWQGDTLVVDTIGFNDASWLDARGTPHSTEMRVEERF
                     RRRDYGHLELTITVTDPRTFTKPITISVVAELLPDTDLLEHYCLENEQDDKRMPGRGP
                     R"
     gene            1318..2148
                     /locus_tag="VFN38_15205"
     CDS             1318..2148
                     /locus_tag="VFN38_15205"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HET9013172.1"
                     /translation="MIRIINIGQQARTAVGEGSVRGIIGPAETGTRARVAIQDVDAGK
                     VHRVASSDRTQVAYVLDGQGARVSHASAGETREQELPRRGGVYLEPGEEATITAGGGP
                     LTLLLVSVPKHTAKANDVASPRGYVFVESALRSLIDERAIRERTFWVNKETGLSQSWD
                     LQIGRMAYAPRAHSPRHVHHASKTSPVTPEHFYFIEKGTGEVKEDSGSRPVGPGDLVL
                     IPAGEWHQLLASDSGFDYIEFQAPFDFMTTMDHDPLGKNWYIKGTDDGTGKPQRWVQS
                     "
BASE COUNT          343 a          727 c          801 g          339 t
ORIGIN      
        1 caccacatgc cgagacgtct tgttgccgca attgctgtcg cagcgctgct gcccgtcgcc
       61 gcgatggcgc agagccagtc gtccaccgat atcacgatga ctggctgcgt cagcgcgaag
      121 ccggatgcca aggggcgcta cacgttcgag aacgcggacg gggtctcgcg ctaccagctc
      181 acgggccgca agctggcgaa attcgcgggg cagcgcgtgg agctcgtcgg cgccagtccc
      241 ggcggcggtg gggtggcggt ccgcggcggg ctcgtggggc cacaggccgg cgcgcgcggc
      301 gtggcgctcg atccctcgca ggagtcggtg cggcggcagc ctggtggcgg cggcgccggg
      361 atcggtccaa gctatcccga attcaaggtg tcgaaggtga agacggtgac gggcgggtgc
      421 gacgaaccgc cgcccgttcg ctgatttatc tcggcccgcg ccccggcatc cgcttgtcgt
      481 cctgctcgtt ctcgaggcag tagtgctcga gcaggtcggt gtcgggcagc agttccgcca
      541 cgacgctgat cgtgatcggc ttcgtgaacg tgcgcgggtc ggtcaccgtg atggtcagct
      601 cgaggtggcc gtagtcgcgg cgccggaagc gctcttccac gcgcatctcg gtgctgtgcg
      661 gcgtgccgcg ggcatccagc cagctcgcat cgttgaatcc gatcgtgtcc accaccagcg
      721 tgtcgccctg ccagcggccc acggagtagc cctgccagga gggcgagccg atctccttcg
      781 gcagcgcgcg gccgtccatg aagatctgac ggaacgtcgt ttccacttcg tagagcatca
      841 cgatcacgcc gcgcgagtgg atgaacttga acggctcggg cagcaggtcg ccgtggaccg
      901 gcccgtcggg caggcagttg agcaccgggt tgaacacgcc gggctgcgcg ttgcggcgca
      961 ggcgttcggc gccttccgcc gtcagcggcc gctgatccgg cgggaagtcc gagaggatgt
     1021 cgcggaagta cttcgagttg agcgactcgc cgagcccgaa caagccgccc gctgcgcgcg
     1081 gatcacccgg cacctgccag atgcccgaga ggtccggctt gccgtcgagc cgcggtaccg
     1141 gccccgtcat gttcaccttg ccgtcgcgcg tccggggcgc gccggccgtc ggcgtatgca
     1201 gccactgggc gttcgcggtc aggcttgccg cgacgcagag cgccgcgacg gcgatcgtcc
     1261 gccggaagtg cgtaggcatg ggtcgattag accacgccgt gcgctaagct gacgcgcatg
     1321 atcaggatca tcaacatcgg gcagcaggcc aggacggccg tgggagaggg cagcgtgcgc
     1381 ggcatcatcg gacccgcgga aacggggacg cgggcgcgcg tggcgattca ggacgtggat
     1441 gccggcaagg tgcaccgcgt ggcctcgagc gaccggacgc aggtggctta cgtgctggac
     1501 gggcaaggcg ctcgcgtgtc gcacgcgtct gccggggaga cgcgcgagca ggagttgccg
     1561 cgccgcggcg gcgtgtatct cgagccgggc gaagaggcga cgattacggc gggcggcggt
     1621 ccgctcacgc tgctgctcgt gtcggtgcca aagcacacgg ccaaggccaa cgacgtcgcg
     1681 tcgccgcgcg gctacgtgtt cgtggagtcg gcgctccgct cgctcatcga cgagcgcgcc
     1741 atccgcgagc gcacgttctg ggtgaacaag gagacgggtc tctcgcagtc gtgggatctg
     1801 cagatcggcc gcatggccta cgcgccgcgc gcgcactcgc cgcggcacgt ccaccacgcg
     1861 tcgaagacga gccccgtcac gccggagcac ttctacttca tcgagaaggg caccggcgaa
     1921 gtgaaggaag acagcggcag ccgtcccgtg gggccaggcg atctggtgct catcccggcg
     1981 ggcgagtggc accagctcct ggcgtcggac tccggcttcg actacatcga gttccaggcg
     2041 ccgttcgact tcatgaccac gatggatcac gaccccctgg gcaagaactg gtacatcaag
     2101 gggaccgacg acggcaccgg caagccccag cgctgggtgc agtcctgagg cttgccgtcg
     2161 tgggggccgc cttcaggcgg cccgacatca gaagttcaac tccatgttca
//
LOCUS       DASSYW010000964         2113 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1078367, whole genome shotgun sequence.
ACCESSION   DASSYW010000964 DASSYW010000000
VERSION     DASSYW010000964.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2113)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2113)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2113
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1078367"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..394
                     /locus_tag="VFN38_15210"
     CDS             <1..394
                     /locus_tag="VFN38_15210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013173.1"
                     /translation="LAASDTAAVRNISREFGVRASRYLPGSMGTDRLFHHAVILLALR
                     DTTAARTQLDVALAALPRVRSMLTEVPPQAAAVGRAMILRAQLAARTGDRPTAERWAR
                     SAQLLWGGADPDLRAPLDELRRTRSSSP"
     gene            448..1059
                     /locus_tag="VFN38_15215"
     CDS             448..1059
                     /locus_tag="VFN38_15215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013174.1"
                     /translation="MRLIERSPSRLPHALLLSISTLLAGCALLEQPYREAAPVYITGT
                     SEQQAIFFEALTDYNIDAEREPIAITLATFPKPSIPDTSAPHMTIATMRLKPGHMPPA
                     SHRLIARITSDGDYPAMGIYAGANFVWRNSWDSTAVATWVTRVVPTKPSMPAYVLTRD
                     PGMHEFTSGDAHQPRLVRATIASVAFAACLDDPMCPTGHCGYW"
     gene            1167..1718
                     /locus_tag="VFN38_15220"
     CDS             1167..1718
                     /locus_tag="VFN38_15220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013175.1"
                     /translation="MAIVLATSCSGSGKMPETALMRPKKPTQAEVIALARSYTFVGPT
                     IPVTALAPIPNAGVKDVDAPSAITIARAVATVSPAPWPEKLLALIHSDKEYKPLGIEA
                     GDNYIWRNEDGSDPKQWETYIVPAAAGANVRKFKRSGAEYSSGDHTQPRLVVQVTRSV
                     VTFGACLEDPACGTGHCGYGEVQ"
     gene            complement(1740..>2113)
                     /locus_tag="VFN38_15225"
     CDS             complement(1740..>2113)
                     /locus_tag="VFN38_15225"
                     /inference="COORDINATES: protein motif:HMM:NF015510.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="outer-membrane lipoprotein carrier protein LolA"
                     /protein_id="HET9013176.1"
                     /translation="PSSAPGQVIRTVQGAGGTGTVDLSAQFLTAPRSRYTVTAGGSQV
                     VAGRPTHVFTLVPKSAAGAPFKTATVYIDDADATIRQFAVTEQNGVQRTVRLTSFRTN
                     VPVDAAAFRFTPPAGTRVVER"
BASE COUNT          334 a          774 c          697 g          308 t
ORIGIN      
        1 cctggccgcc agcgacacgg cggcggtgcg caatatcagc cgtgagttcg gcgttcgtgc
       61 atcgcggtac cttcccggat cgatggggac ggaccgcctg tttcaccacg ccgtcatcct
      121 gctcgccctg cgggatacga cggcagcccg cacccagctc gacgtcgcgc tcgcggccct
      181 tccgcgcgtg cgcagcatgc tcacggaggt accgccgcag gcggccgccg tgggtcgcgc
      241 gatgatcctc cgcgcgcagc tcgccgcacg cacgggcgac cgacccacgg ccgagcggtg
      301 ggcccgctcg gcgcagctgc tgtggggcgg agccgacccc gaccttcgcg cgccgctcga
      361 cgagctgcgc cgcacgcgct catcgtcgcc ctgatcgaac gttctcgcca cggatccccc
      421 gatcgactcc cccacccgga ggcccgaatg agactcattg aacgctcgcc atcccgactg
      481 ccccacgccc tgctgctgtc gatctccacg ctgctcgcgg gctgcgccct gttggagcag
      541 ccgtatcgtg aggcggcgcc ggtgtacatc accggaacgt cggaacagca ggcgatcttc
      601 ttcgaggcgc tgacggacta caacatcgac gcggagcgcg agccgatcgc aatcaccctg
      661 gccacgtttc cgaagccctc gattcccgac acgtcggcgc cgcacatgac gatcgcaacg
      721 atgcgtctca agcccgggca catgccgccg gcatctcatc ggctgatcgc gcgcatcacg
      781 agcgacggcg attatccggc gatgggcatc tacgcggggg cgaacttcgt gtggcggaac
      841 tcctgggatt ccaccgcggt cgcgacatgg gtcacgaggg tcgtgccgac caagccgtcc
      901 atgccggcgt acgtcctcac ccgcgacccg ggcatgcatg aattcacgag cggcgacgcg
      961 caccagccgc gactcgtacg cgccacgatc gcgagcgtcg ccttcgcggc ctgtctggac
     1021 gacccgatgt gcccgaccgg tcactgtggg tactggtagg acgcactggc gacgcgtcga
     1081 tcgctccacg cactcccact cgcacgcgag gtccaccaat catgccacta tcgcaccgtg
     1141 tcctgcgcgc ggcattcgtt gcgccgatgg cgatcgtgct cgcgacgtcc tgcagcggtt
     1201 ccggcaagat gccggagacc gcgctgatgc gccccaagaa gccgacgcag gccgaagtca
     1261 tcgcgctcgc gcgctcgtac accttcgtcg gaccgacgat accggtgacg gccctggcgc
     1321 ccatcccgaa cgccggggta aaggacgtcg acgcgccgtc cgcgatcacc atcgctcgtg
     1381 ccgtcgcgac ggtgtcaccg gcgccgtggc cggagaagct tctcgcgctc atccacagcg
     1441 acaaggaata caagccgctc ggcatcgagg caggcgacaa ctacatctgg cgcaacgagg
     1501 acgggtcgga tccgaaacaa tgggagacgt acatcgttcc cgcggcggcc ggcgccaacg
     1561 tccgcaagtt caagcgcagc ggcgccgaat actcgagcgg cgatcacacg cagccgcgcc
     1621 tggtggtgca ggtcacccgg agcgtcgtca cgttcggcgc ctgcctcgag gatccggcct
     1681 gcggcaccgg acactgcggg tacggggaag tgcagtagcg ccgtgacgag gaggcgccgc
     1741 tagcgctcga cgacgcgcgt cccggccggc ggcgtgaacc ggaacgcggc ggcgtccacg
     1801 gggacgttcg tgcggaacga cgtcagccgc acggtgcgct ggacgccgtt ctgctccgtc
     1861 acggcgaact gccggatcgt cgcgtcggcg tcgtcgatgt agaccgtcgc cgtcttgaac
     1921 ggcgcacccg cggcgctctt cggcacgagc gtgaagacat gcgtcgggcg gccggccacg
     1981 acctggctgc cgcccgccgt caccgtgtac cggcttcgcg gggcggtgag gaattgcgcc
     2041 gagagatcca ccgtccccgt cccgccggcg ccctggaccg tgcggatgac ctggcccggc
     2101 gcactgctcg gga
//
LOCUS       DASSYW010000965         2037 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1504236, whole genome shotgun sequence.
ACCESSION   DASSYW010000965 DASSYW010000000
VERSION     DASSYW010000965.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2037)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2037)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2037
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1504236"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            322..678
                     /locus_tag="VFN38_15230"
     CDS             322..678
                     /locus_tag="VFN38_15230"
                     /inference="COORDINATES: protein motif:HMM:NF015735.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HET9013177.1"
                     /translation="MQYILLNYVPEDGWNRLTKAQQDEGMAAAYAYNEALTKAGIFLG
                     SNRLQPSASATTVRTADGKTQVLDGPYADTREQLGGYYMIDVPDLDAALAWAARCPGS
                     EYGVVEVRAIWPRGGK"
     gene            681..1247
                     /locus_tag="VFN38_15235"
     CDS             681..1247
                     /locus_tag="VFN38_15235"
                     /inference="COORDINATES: protein motif:HMM:NF013989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HET9013178.1"
                     /translation="MRRLSVFETVSVDGYFTDANNDMSWAHAGEADAEWNEYVSGNAS
                     GGGVLLFGRVTYEMMASFWPTPAAFQAMPIVAKRMNDGQKIVFSRTMTRAEWKNTTVI
                     NDDLVAAVRRLKNESGGDMVILGSGSIVAQLVAAGLIDELQLVVKPVVLGAGRTPFDG
                     MPQRQLLERTSTREFRNGNVVSHYRPVK"
     gene            1244..>2037
                     /locus_tag="VFN38_15240"
     CDS             1244..>2037
                     /locus_tag="VFN38_15240"
                     /inference="COORDINATES: protein motif:HMM:NF042530.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6596 domain-containing protein"
                     /protein_id="HET9013179.1"
                     /translation="MNDARDPGDERAHATADAVARRGYGKLVALLAVRTHDVAAAEDA
                     LSDAFAAALAKWPAEGCPANPEAWLLTVARRKLIDADRRQRTSLDSALELRILAEEVG
                     GDAEIPDHRLALMFACAHPAIEAGIRAPLMLQAVLGLDAKRIASAFLTSPAAMGKRLV
                     RAKDKIRQAGIPFRIPDRDELPARLDTVLGAIYAAFTEGWTDPEGTDLARRDLVEEAI
                     FLARVVTELLPDAAEALGLLALMLYAHGRRRARRTTSGESVPFAEQ"
BASE COUNT          330 a          727 c          710 g          270 t
ORIGIN      
        1 ctggcagccg atggcgtaga ccgcctggct gccgctcacg atgacccggt ccgccgcgac
       61 gggcgtccgg ggtgaagcgc tacaggatgg cgcccgtcgc ggcgtccagg ctgaggacct
      121 ccgccgcttc ggcgaggaag agccgtccat ttcgagccgc gatgttcccc gccgccggcg
      181 acgccgtggc cttcaccgcc ggagtccggc tgctgtcgag agcttgcgga acggccggcc
      241 gatgtccaaa tcgcctcttc ccgcccgtca ttgcacggac ggcgcatacc cgccgccacc
      301 gaccaacgac ggaggagctt catgcaatac attctgctga actatgtccc cgaagacggc
      361 tggaaccggc tcaccaaggc ccagcaggac gaggggatgg ccgcggcgta cgcgtacaac
      421 gaagcgctca cgaaggccgg gatctttctc ggcagcaacc gcctccagcc cagcgcctcg
      481 gccaccacgg tgcgcacggc ggacggcaag acgcaggtgc tcgacggccc ctacgccgac
      541 acgcgcgagc agctcggcgg ctattacatg atcgacgttc ccgatctcga tgccgccctc
      601 gcctgggcgg cccgctgccc ggggagcgag tacggcgtcg tcgaggtgcg ggcgatctgg
      661 ccgcgcggag ggaagtgacc atgcgccggc tgagcgtctt cgagacagtg tcggtggacg
      721 gctacttcac cgacgcgaac aacgacatga gctgggccca cgccggcgag gcggacgccg
      781 agtggaacga gtacgtctcc ggcaacgcga gcggcggcgg cgtgctgctg ttcggccggg
      841 tcacctacga gatgatggcg agcttctggc ccaccccggc ggccttccag gccatgccga
      901 tcgtggcgaa gcggatgaac gacggacaga agatcgtctt ctcgcgcacg atgacgcgcg
      961 ccgagtggaa gaacaccacc gtcatcaacg acgacctcgt ggccgcggtg cgacgactca
     1021 agaacgaatc gggaggcgac atggtgatcc tggggagcgg gagcatcgtg gcgcagctcg
     1081 tcgccgccgg cctgatcgac gagctccagc tcgtggtgaa gccggtggtg ctcggcgccg
     1141 gccgcacccc cttcgacggc atgccgcagc gccagctcct cgagcgcacg agcacgcgcg
     1201 agttccggaa cgggaacgtc gtgtcgcact acagaccggt gaagtgaacg acgcacgcga
     1261 cccgggcgac gaacgcgcac acgccacggc cgacgcggtc gcgcggcgcg gctacggcaa
     1321 gctcgtcgcc ctgctcgcgg tgcgcacgca cgacgtcgcc gcggccgaag acgcgctctc
     1381 cgacgcgttc gcggccgcgc tggcgaagtg gccggccgag ggatgtccag cgaatccgga
     1441 ggcgtggctg ctcaccgtgg cgcggcgcaa gctcatcgac gccgaccgcc gccagcgcac
     1501 gagcctcgac agcgcgctgg agctgcgcat ccttgccgag gaggtcgggg gcgacgccga
     1561 gatcccggat catcggctcg ccctgatgtt cgcctgcgcg catccggcca tcgaagcggg
     1621 gatccgcgcg cccctcatgc tccaggcggt gctcggcctc gacgcgaagc ggatcgcctc
     1681 cgccttcctc acctcgccgg cggcgatggg gaagcggctg gtgcgcgcca aggacaagat
     1741 ccgccaggcg gggatcccct tccgcatccc cgaccgcgac gagctccccg cgcgcctcga
     1801 cacggtgctc ggcgccatct acgccgcgtt caccgaagga tggaccgatc ccgagggcac
     1861 cgacctcgcg cggcgcgatc tggtggagga agcgatcttc ctcgcgaggg tcgtgaccga
     1921 gctgctcccc gatgcggccg aagcgctcgg cctgctcgcg ctcatgctgt acgcgcacgg
     1981 tcgccggcga gcgcgacgca cgacgtcggg ggagtccgtg cccttcgccg agcagga
//
LOCUS       DASSYW010000966         2743 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_400467, whole genome shotgun sequence.
ACCESSION   DASSYW010000966 DASSYW010000000
VERSION     DASSYW010000966.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2743)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2743)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2743
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_400467"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1310
                     /locus_tag="VFN38_15245"
     CDS             <1..1310
                     /locus_tag="VFN38_15245"
                     /inference="COORDINATES: protein motif:HMM:NF006056.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HET9013180.1"
                     /translation="DPALGNHRQADVLIEGSKIKAVAPNIPVGDAYVIDATDTIVMPG
                     FVDTHRHIWEGILRNIAPDALLHDYFRDILGVLAPVYRPQDAYAGNLVSAYGAIDAGI
                     TTLLDWSHIQNTPEHTDASIAALQESGLRAVFAYGTPNLDLAAWWYDSTLKHPTDIRR
                     VAKQYFNAKDQLLTLALAPRGPEFTTPEVSKHDWDLARELGVRISVHVGVGEAGMKGR
                     LGEMGKAGLLGPDTTYIHCCTLNDEELQMIADTGGTVSLASPIELQMGHGTPPIQRCL
                     DRGLRPSLSVDVETTMCGDLFAQMRSVLTLQRGQVNERRLRGETNLPQILTSRDVIEF
                     ATIEGAKANGLDSKVGTLTPGKEADVIMLRTDRINVLPINDPIGVVVRGMDSSNVDSV
                     WIGGKPKKRHGHLVNVDLDRVTRLAYESRDYVVAKSGFVLPSI"
     gene            complement(1307..>2743)
                     /locus_tag="VFN38_15250"
     CDS             complement(1307..>2743)
                     /locus_tag="VFN38_15250"
                     /inference="COORDINATES: protein motif:HMM:TIGR03123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HET9013181.1"
                     /translation="LKRLSGEASGGATVDAHAVTMTAELSRVFLTKREGVGAVLDAVE
                     SALDGAVHVFTVNGLFVPRAAARMRPLDVAAANWMATASLIARTHPNALLVDIGSTTT
                     DVIPIVAGRVAAEGVTDPDRLASGELLYTGAVRTPVEALTADVCVQGRRVTLAAEGFA
                     TSADVHLWRGDLCAGDVTGGTADGRPATREAAGDRLARALCSDRELMDDAAITGLADA
                     LASAQIARVAGTIARVASRHPSIRHAVVAGSGAFIAARAARAAGLQVVALADAHGDGA
                     SRCAPAAAVALLIAERLAVRTVVKVGGGLLAHDAELAAVVSALDGSSRTLIVPGGGPF
                     ADAVRDAYARGAVDDDAAHWMAVLAMDQYAELLASRMPRGCVVTSLSAACRAASSGQV
                     PILAPSRWLREADPLPHSWDVTSDSIAAWIAGQVGARRLVLVKPPGATGHLVDAYFER
                     ARPAGLDVHVVPADDQGGLKTALHGEPV"
BASE COUNT          476 a         1003 c          903 g          361 t
ORIGIN      
        1 tggatccggc actcggcaac catcgtcagg ctgacgtact gatcgaaggc tcgaagatca
       61 aagccgtggc gccgaacatc ccggtcggcg acgcctacgt gatcgacgcc accgacacga
      121 tcgtgatgcc gggattcgtg gacacccatc gccacatctg ggaaggcatc ctccgcaaca
      181 tcgcgcccga cgcgctcctg cacgactact tccgcgacat cctcggcgtg ctcgccccgg
      241 tctaccgccc gcaggacgcc tacgccggca acctggtgag cgcctacggt gcgatcgacg
      301 ccggcatcac cacgctcctc gactggtcgc acatccagaa cacgccggag cacaccgacg
      361 cgtcgatcgc ggcgctgcag gagtcgggac tgcgagcggt gttcgcctac ggcacgccca
      421 atctcgatct cgcggcctgg tggtacgaca gcacgctcaa acaccccacg gatatccgga
      481 gggtggccaa gcagtacttc aacgcgaaag accagctgct gacgctggcg ctcgccccac
      541 ggggacccga gttcaccaca ccggaggtgt cgaagcacga ctgggacctg gcgcgcgagc
      601 tgggcgttcg catcagcgtg cacgtcggcg tcggcgaggc gggcatgaag ggccggctgg
      661 gcgagatggg caaggccggc ctgctcggcc ccgacaccac ctacattcac tgctgcacgc
      721 tgaacgacga ggaactgcag atgattgccg ataccggcgg cacggtgtcg ctggcctcgc
      781 ccatcgagct gcagatgggc cacggcacac cgcccatcca acgctgcctc gatcgcggcc
      841 tgcggccgag cctgagcgtg gacgtcgaga ccacgatgtg cggcgacctg ttcgcccaga
      901 tgcgatccgt gctgacgctg cagcgaggcc aggtgaacga acgccggctg cggggtgaaa
      961 cgaacctgcc gcagatcctc accagccgcg acgtgatcga gtttgcgacc atcgaaggcg
     1021 ccaaggcgaa cggactcgac agcaaggtgg gcaccctgac gccaggcaag gaagccgacg
     1081 tcatcatgct gcgcaccgat cgcatcaacg tgctgccgat caacgacccg atcggcgtcg
     1141 tcgtgcgcgg catggactcg tcgaacgtgg actcggtgtg gattggcggg aagccgaaga
     1201 agcggcacgg ccacctggtg aacgtggatc tcgaccgggt aacgcggctc gcctacgagt
     1261 cgcgcgacta cgtggtggcg aagagcggtt tcgtgctccc ctcgatctag accggttcgc
     1321 cgtggagggc cgtcttcagg ccgccctgat cgtcggccgg cacgacgtgc acgtcgagac
     1381 cggccggccg cgcccgctcg aagtacgcgt cgaccagatg cccggtggcg ccgggcggct
     1441 tgacgagcac cagccgccgc gcacccactt gacccgcgat ccacgcggcg atgctgtcgc
     1501 tcgtgacgtc ccacgagtgc ggcaacggat cggcctcgcg cagccatcgc gacggcgcca
     1561 ggatcggcac ctgaccggac gatgcggcgc ggcacgcggc gctcaggctg gtgacgacac
     1621 agccgcgagg catgcgcgac gccagcagct cggcgtactg atccatcgcg agaaccgcca
     1681 tccagtgcgc ggcgtcatcg tcgaccgcac cgcgagcgta ggcatcccgc acggcgtcgg
     1741 caaacgggcc gccgcccggc acgatcagcg tgcgcgacga gccgtccagt gcactcacca
     1801 cggccgccag ctcggcatcg tgcgcgagaa gcccaccgcc aaccttgacc accgttcgaa
     1861 ccgcgagacg ctcggcgatg agcagcgcga ccgccgccgc gggagcgcag cgcgaggcgc
     1921 cgtcgccgtg cgcgtcggcg agcgccacca cctgaagccc cgccgcgcgt gcggcccgcg
     1981 cggcgatgaa cgcccccgag ccggccacta ccgcgtgccg aatcgacggg tgacgggatg
     2041 ccacgcgtgc gatcgtgccc gccacgcgtg cgatctgtgc cgaggccagt gcgtcggcga
     2101 gcccggtaat cgcggcgtcg tccatcagct cgcgatccga acagagcgcc cgggcgagac
     2161 gatcgccggc ggcctcgcgc gtcgcggggc ggccgtcggc tgtgccgccg gtcacgtcgc
     2221 cggcgcacag gtccccgcgc cacagatgca cgtcagcgga tgtcgcgaac ccttcggcgg
     2281 ccagggtgac gcgacgtccc tgcacgcaca cgtccgcggt cagcgcctcg accggcgtac
     2341 gcacggctcc cgtgtacagc agctctccgc tcgccaggcg atccggatcc gtgacgccct
     2401 ccgcggcgac gcgtcctgca acgatcggaa tgacgtccgt cgtcgtgctg ccgatgtcca
     2461 cgagcagcgc attcggatgc gtccgcgcga tcaacgatgc ggtggccatc cagttcgccg
     2521 cagccacatc gagcggcctc atgcgggccg cggcccgcgg cacgaagaga ccgttcaccg
     2581 tgaacacgtg aacggcaccg tccagagccg actcgaccgc atcgagcacc gcccccacgc
     2641 cctcacgctt cgtcaggaaa acacgcgaga gctctgccgt catggtgacc gcgtgcgcgt
     2701 caaccgtcgc accgccgctc gcctcgccgg acaaccgctt cag
//
LOCUS       DASSYW010000967         2043 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_838827, whole genome shotgun sequence.
ACCESSION   DASSYW010000967 DASSYW010000000
VERSION     DASSYW010000967.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2043)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2043)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2043
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_838827"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2043
                     /locus_tag="VFN38_15255"
     CDS             <1..>2043
                     /locus_tag="VFN38_15255"
                     /inference="COORDINATES: protein motif:HMM:NF022773.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF3131 domain-containing protein"
                     /protein_id="HET9013182.1"
                     /translation="AHTEGDLAWLHSVRYVITLDSDTVLPRDAGLTLIGTIAHPLNRA
                     VFDERAGRVTRGYGILQPRVSVSLASANGSRYAAIFAGHPGVDPYTTAVSDVYQDLFA
                     EGTYTGKGIYDVAVFEEATAGRFPENSLLSHDLIEGSFARAALVTDVEVFDDYPTRYL
                     TATRRLHRWIRGDWQLLPWLVSEIPGPRGRGVNPLAAVSRWKMLDNMRRSLTPVLTLA
                     WLVAGWTILPHAGLAWSFMTLAAFGFPWYAPLVVAALRPPFGESWRPYYAGLAHDVSA
                     SVKQFAIAIVMLPHHALLSIDAIARTTWRVAVSHRHMLEWQTASQVEKTSVGGRGPVW
                     RRMAPAVALAVVLLAAMWRHSVQAGTTTTGWLLLGFLTGCWLLAPEVALALSAPRTRA
                     DLELTPADRERALRYARSHWRYFDELASAETHWLIPDNLQETPAPIVAARTSPTNIGL
                     QLVATMSARDLGLITTAAMIERLERVITTVEQLHKVHGHLVNWYDLIDLRVLEPSYVS
                     AVDSGNLAGHLMAIAMGCLEESDGGDDERARLRSIAERARTLAMAMDFTLFYDARRRL
                     MSIGYDVRTGKLDESAYDLLASEARLASFVAVAKGDVPVEHWFHLGRTLTTTANATAL
                     VSWSGSMFEYLMPVLVMASRPYSLLDQTHQAAVRRQIGYAGSREVPWGISESAYNVR"
BASE COUNT          271 a          759 c          712 g          301 t
ORIGIN      
        1 cgcccacacg gagggcgatc tcgcctggct gcactcggtg cgctacgtca tcacgctcga
       61 ctccgacacc gtgctgccgc gcgacgccgg gctcacgctc atcggcacga tcgcccatcc
      121 gctcaaccgc gccgtgttcg acgagcgggc ggggcgcgtc acgcggggct acggcatcct
      181 ccagccgcgg gtgagcgtgt cgctggccag cgccaacggc tcgcgctacg ccgccatctt
      241 cgccggccat ccgggcgtcg atccgtacac gacggcggtg tccgacgtgt accaggacct
      301 gttcgccgag gggacgtaca ccggcaaggg gatctacgac gtggcggtgt tcgaggaggc
      361 gaccgccggc cgcttccccg agaactcgct cctcagccac gacctcatcg agggatcgtt
      421 cgcgcgcgcg gcgctcgtga ccgacgtcga ggtgttcgac gactatccca cgcgctacct
      481 caccgcgacg cgccggctgc accgctggat ccgcggcgac tggcagctgc tcccctggct
      541 cgtgtcggag atccccggcc cgcgcgggcg cggggtgaac ccgctcgcgg cggtgtcgcg
      601 gtggaagatg ctcgacaaca tgcggcgcag cctcaccccc gtgctgacgc tggcgtggct
      661 ggtggcggga tggacgatcc tcccccacgc ggggctcgcc tggtcgttca tgaccctcgc
      721 cgcgttcggg ttcccctggt acgcacccct cgtcgtcgcc gcgctgcggc ccccgttcgg
      781 cgagtcgtgg cgtccctact acgccgggct cgcgcacgac gtcagcgcca gcgtgaagca
      841 gttcgccatc gcgatcgtga tgctgccgca ccacgcgctc ctctccatcg acgccatcgc
      901 gcgcaccacg tggcgcgtgg ccgtgtcgca ccggcacatg ctggagtggc agaccgcgtc
      961 gcaggtggag aagacgagcg tcggcggacg cggcccggtg tggcggcgca tggcgcccgc
     1021 cgtggcgctc gccgtcgtgc tgctcgccgc gatgtggcgg cacagcgtgc aggccggcac
     1081 gaccaccacc ggctggctgc tgctcggctt cctcaccggc tgctggctgc tcgcgccgga
     1141 ggtggccctc gcgctgagcg ctccgcgcac gcgggccgac ctcgagctca ccccggccga
     1201 ccgcgagcgg gcgctccgct acgcgcgcag ccactggcgc tacttcgacg agctcgcgtc
     1261 ggcggagacc cactggctca tccccgacaa cctccaggag acgcccgctc ccatcgtcgc
     1321 cgcgcgcacg tcgcccacga acatcgggct ccagctcgtc gccacgatgt cggcgcgcga
     1381 cctcgggctc atcaccaccg cggcgatgat cgagcggctc gagcgcgtga tcaccacggt
     1441 ggagcagctg cacaaggtgc acgggcacct ggtgaactgg tacgacctca tcgacctgcg
     1501 ggtgctcgag ccgtcgtacg tctcggcggt ggactccggc aacctcgccg gccacctgat
     1561 ggcgatcgcc atgggctgcc tggaggagtc ggacggcggc gacgacgagc gggcgcggct
     1621 ccggagcatc gccgagcggg cgcgcaccct ggcgatggcg atggacttca ccctgttcta
     1681 cgacgcgcgg cggcggctga tgtccatcgg ctacgacgtg cgcacgggca agctggacga
     1741 gtcggcctac gacctgctcg cgtcggaggc gcggctggcc agcttcgtcg cggtggcgaa
     1801 gggtgacgtg ccggtggagc actggttcca cctcggccgc accctcacca cgacggcgaa
     1861 cgccacggcg ctcgtgtcgt ggagcggcag catgttcgag tacctcatgc cggtgctcgt
     1921 catggcgtcg cgcccctact cgctgctcga ccagacgcac caggccgcgg tgcgccggca
     1981 gatcgggtac gccggcagcc gcgaggtgcc gtgggggatc tcggagtcgg cgtacaacgt
     2041 ccg
//
LOCUS       DASSYW010000968         2325 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1630918, whole genome shotgun sequence.
ACCESSION   DASSYW010000968 DASSYW010000000
VERSION     DASSYW010000968.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2325)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2325)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2325
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1630918"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(197..586)
                     /locus_tag="VFN38_15260"
     CDS             complement(197..586)
                     /locus_tag="VFN38_15260"
                     /inference="COORDINATES: protein motif:HMM:NF015953.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HET9013183.1"
                     /translation="MRLLALGVILLVANAIGLVVAAWLLDDMSLSASGFLIEVAIFTG
                     LMLFVEPFLRKLALTHARVLLGSTAIIATLIALAVTEWIGEGLEISGAGTWVLAAIIL
                     WGVVVIARLILPLFLFRELLRQSRERR"
     gene            complement(706..1293)
                     /locus_tag="VFN38_15265"
     CDS             complement(706..1293)
                     /locus_tag="VFN38_15265"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HET9013184.1"
                     /translation="MWLQVEDASELRDRVRALVAMRVAQPADADDITQDVLERVLRRR
                     AQLRDAERADAWLARIVRNAVVDHHRQRRLPAPADPAVLDAVAVGDDDRPSASGRLAP
                     CVQPLVDSLPPPYAEALRLTDLGTHTQEDAAARLGLSASGMKSRVQRGRRLLEAALHG
                     CCTVERDTRGALTDIAPQPRSRCGASAPCLDDSGR"
     gene            1691..>2325
                     /locus_tag="VFN38_15270"
     CDS             1691..>2325
                     /locus_tag="VFN38_15270"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008753 - NADPH dehydrogenase (quinone)
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0050136 - NADH dehydrogenase (quinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HET9013185.1"
                     /translation="MHVLIVYAHPYRGSFCHAVLERVIRGLGDGGHSFEVIDLHGCSF
                     DPVFRNRDYNQFMHETLPDDLIAQADLKQAILARAGGPLRRAIVKRWMGGKSDREIVT
                     ALGRRTPRDVRKHQAKVARADGLIFIAPVYWMGLPAILKGWFERVFAYGFAYTLTPEG
                     WRGDLEGRVPLLRQRKGLIVSPTFFTEEEYEKGWREAMHTILCEWGLKMAGV"
BASE COUNT          338 a          794 c          872 g          321 t
ORIGIN      
        1 agcgggtcgc tgtaggtgcc gcccggcgcg aacgtcgccg cgatcgcccc ggcgtcgtgg
       61 gcgttccacc cgtcgaagta gcgccgggcg tgggcgaggc ggtccatcgt cgtctccaag
      121 cggtcggggc tgcgagcgta ccgtcctccc ggccgtcctc gccagcctcg acgaggcgcg
      181 gggccgcccg cgccgcctag cgtcgctcgc gcgactgccg caggagctcg cggaacagga
      241 agagcggcag gatcagccgt gcgatcacga ccacgcccca gaggatgatc gcggccagca
      301 cccaggtgcc ggcgccgctg atctcgaggc cctcgccgat ccactcggtc acggcgagcg
      361 cgatcagggt cgcgatgatc gccgtgctgc cgagcagcac gcgggcgtgg gtcaatgcga
      421 gcttgcgcag gaacggctcg acgaacagca tcaggcccgt gaagatcgcg acctcgatga
      481 ggaagccgga cgcgctcagc gacatgtcgt cgagcagcca ggccgcgacg acgaggccga
      541 tcgcgttggc gacgaggagg atgactccga gggcgagcag gcgcatcagg gcgcgctccg
      601 ggctgcgggt cgcatgcccg gcatcgtgac agcccgctca cgctgctcgc agacgtgcgc
      661 cggtctccgt ggggtccagc tggcgactca gatgcacggc acgactcagc gccccgagtc
      721 gtcgaggcag ggcgccgacg cgccgcaccg ggaacgcggc tgcggtgcga tgtccgtgag
      781 cgccccgcgc gtgtcgcgct cgacggtgca gcatccgtgc agcgcggcct cgagcaggcg
      841 ccggccacgc tgcacgcggc tcttcatgcc cgaggcggac aggccgaggc gcgccgctgc
      901 gtcctcctgc gtgtgcgtgc cgagatcggt cagtcgcagc gcctcggcgt acgggggtgg
      961 cagcgagtcc acgagcggct ggacgcacgg ggcgagccgg ccgctcgccg agggccggtc
     1021 gtcgtcgccg actgccacgg cgtccaggac cgccgggtcg gcgggcgcgg ggagacgccg
     1081 ctggcgatgg tgatcgacga cggcgttgcg gacgatgcgc gcgagccagg cgtcggcgcg
     1141 ctcggcatcg cgcagctgcg cgcgccgccg caggacgcgc tcgaggacgt cctgggtgat
     1201 gtcatcggcg tcggccggct gcgcgacgcg catggcgacg agggcgcgaa cacggtcgcg
     1261 cagctcgctc gcgtcctcta cctgcagcca catgtcgtcg ccttcgggtc ggcgccgcag
     1321 cacgccgtct tctgcgacgg ctcgcagcag gtccgctgat ccgccgcgga gcagcacgcg
     1381 ctgggctgcg tggcgggcac ctggggtgcg ggggtggccc cgtcggcgcg gggcgtcgtg
     1441 aaggtgttca tgtccagaag acggggcgcg gcggaaatgg acgcacatcc gccgcgagag
     1501 gcggtcggcc tgcatcgatg cacttcgata gagcaagcct agtgccgcgg cccgcatgga
     1561 tcaaggatcg tcgatggagc cgcgtactaa tccgcatcga tcgtccgcgc gggcccggat
     1621 gaacgccgcg cgggcgtctg cgttcatgca tggatcaccc accagcggcg ccctcacgag
     1681 gaggtgcccg atgcacgtgc tgatcgtcta cgcgcacccg tatcgcggtt cgttctgcca
     1741 cgcggtcctg gagcgggtca tccgcggcct gggcgacggc ggccactcgt tcgaggtgat
     1801 cgacctccac gggtgctcgt tcgatccggt cttccgcaac cgcgactaca accagttcat
     1861 gcacgagacg ctgcccgacg acctcatcgc gcaggccgat ctcaagcagg cgatcctggc
     1921 gcgcgccggc ggcccgctac ggcgggcgat cgtcaagcgc tggatgggcg ggaagagcga
     1981 ccgcgagatc gtcacggccc tcggccgccg cacgccacga gacgttcgca agcaccaggc
     2041 gaaggtcgcc cgcgccgacg ggctgatctt catcgccccg gtctactgga tgggcctgcc
     2101 cgcgatcctc aaaggctggt tcgagcgggt cttcgcctac ggcttcgcct acaccctgac
     2161 gccggagggc tggcggggtg acctggaggg cagggtgccg ctgctcaggc agcggaaggg
     2221 gctgatcgtg agcccgacgt tctttacgga ggaggagtac gagaagggct ggcgtgaggc
     2281 gatgcacacc atcctctgcg agtgggggct gaagatggct ggcgt
//
LOCUS       DASSYW010000969         5931 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_65208, whole genome shotgun sequence.
ACCESSION   DASSYW010000969 DASSYW010000000
VERSION     DASSYW010000969.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 5931)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5931)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5931
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_65208"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1275)
                     /locus_tag="VFN38_15275"
     CDS             complement(<1..1275)
                     /locus_tag="VFN38_15275"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HET9013186.1"
                     /translation="MYARLLRYLRPHSWRMAGTIACNVVAAALDVFSFTLLVPFLNAL
                     FGEAQLIPSTSPTWITRLQQQLVGAFLNPADRLGSVEVMMVAIIAIVALKNVFVWLGG
                     QLGASLQENVTRDLRDGVFRHLQRLPLGYFQRTKTGQIISRVLADTEQTKALITELVT
                     RTLQNLAQIVGTIVILLNYSVKLTFVALVIAPLLTLSLQPVLRKLRKGHRRLRGDYGE
                     ITSVLQEVVSGVRLVKSFRGEPYEDRRFTDASHRYSSGMVRITRVASLSQPMTEMIGT
                     SVAMLILWIGAREVLSGTGSMDSATLITFMIMVMRLLPPLKQLSQAPTTAQQSFASAE
                     RLFEVLDLPTEEQLDRGTIAVSGLRDAIEFQHVSFAYDDEPVLRDVSFVARRGDVVAL
                     VGPSGSGKSTLVDLIPRFYETTAGRITLDGVDT"
     gene            complement(1279..2841)
                     /locus_tag="VFN38_15280"
     CDS             complement(1279..2841)
                     /locus_tag="VFN38_15280"
                     /inference="COORDINATES: protein motif:HMM:NF020249.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HET9013187.1"
                     /translation="MPFQVKAVLWVDDEAELLEPHRIFLRDKGFDVETATNADDAAEM
                     VRRRPYDLVLLDEQMPGTRGLEALRELRDIEPGLQVVMVTKSEEDNTLTEALGRDITG
                     YLVKPVTPRQVYAMVARLLEGPRIRQQAVARAFVDRFRAMQNESPRDLDWRGWIDRYL
                     ELVQWDLDLASANEMGLHDSLRGLFPEMRREFALYMSTAYPEWLAALDGDRPPLSIDI
                     VNEFLMPIVRQDRAAVFIVIDCLRLDQWKVIEPVVAQLFEIETTHYFGVLPTATPYAR
                     NALFSGLFPNEIAARFPDWWGEREDETLNAHERELLEAQLVEIGHRAPVKYDKISSSH
                     DADELERRLANAIAPDGISAFVFNFVDLLTHGRSESAILYEVARDEIALRQLTLQWFK
                     RSALFSVLQEAARRKVKVLVTSDHGSIHCHTPATVFARRDATQNLRYKFGEDLRAENP
                     DYALLFKDEEALKLPRRGLGANTLLATGDSFFVYPTKLREYQSRYRGSFLHGGVTPEE
                     CILPVSLLTPRR"
     gene            2942..3334
                     /locus_tag="VFN38_15285"
     CDS             2942..3334
                     /locus_tag="VFN38_15285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013188.1"
                     /translation="MQSPLPPYALPTPTFPFPHLAGLAGRAPIGGAREVALACFVAAR
                     LAADAMGGNGDPSARSARSAGARGWLGTLALPPAVRGPLFKCIETTADGSAGAVGREL
                     AEVATAGAAYLDSASRTELDALVAALRG"
     gene            3393..4244
                     /locus_tag="VFN38_15290"
     CDS             3393..4244
                     /locus_tag="VFN38_15290"
                     /inference="COORDINATES: protein motif:HMM:NF015736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DnaB-like helicase C-terminal domain-containing
                     protein"
                     /protein_id="HET9013189.1"
                     /translation="MPRGADISPLSLLLGRVDAVADGATPADTVPSGFPSLDKLLGGG
                     LRRGDLVVLGGDVGSGKSALALAIALRVSQQGRSTHFYSGEMVVERVLERALAIEGRT
                     RIDDLRRGSMDEATRAGVGAAAIRLRDELPVIERIPAGGVSAIAEEVQAVRGVELVVV
                     DGLDALLPSARESAEEQAAAVRALKQLALDAKVAVLLTTPLPNLSHRDDRRPLLDDFG
                     AAGAVKERADVVLGLFREGMYESARGIEGATELLVRKNRNGGIGYADLYFYAQWMRFE
                     DMLDPDR"
     gene            4256..5626
                     /locus_tag="VFN38_15295"
     CDS             4256..5626
                     /locus_tag="VFN38_15295"
                     /inference="COORDINATES: protein motif:HMM:NF015724.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CsgG/HfaB family protein"
                     /protein_id="HET9013190.1"
                     /translation="MRIRSSTLSLALAVLLGACATGRAISTPTPDAVARLERAQRGTP
                     ASASVNRALGIAYYQLGRLADARAALETAARLDAKDGTTSLYLGMTAEAQNDLPAAKR
                     AYASYLQFGRTSRVRAQLQSHLASLARKELALEAKAAVQQEASLGTTDGSPRTVAVLP
                     LRFSGADSSLRPLERGFADLLTTDLGRSSQLTLVERGRLQALLDEVALQSSGATDSAS
                     NVRVGRLLRAGRLVQGSLLQLPGSQLRVDAAVVNVPTTQIQGTAQGDDQLDAVFNLEK
                     KIALDLFRELGVTLTVAERNAVEQRPTRSLAAFVSYSRGLVAEDEGRWDDASRFFDDA
                     VRLDPGFSAAQRRSSESRAISAGAAVTSSTIQTGLQGTTEGSVVAAASGGTATVSGGS
                     LGGTLAMTTDGVNASTAQGATAGAATTAAAPLAPVVDAVSAATGADKPTTTGVITITL
                     PRPKLP"
     gene            5623..>5931
                     /locus_tag="VFN38_15300"
     CDS             5623..>5931
                     /locus_tag="VFN38_15300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013191.1"
                     /translation="MMRRALALAALGTLLAPTWRAGAQSVFDSELRLAPQFLQYRLKD
                     PAGETISQVAVPLFVSVPLSERLTIDVGTSYARSRVVAGGAASEISGLTDTQVRGNLT
                     L"
BASE COUNT          876 a         2052 c         2106 g          897 t
ORIGIN      
        1 cgtgtccacg ccgtccaggg tgatgcggcc ggccgtcgtc tcgtagaacc gcggaatgag
       61 gtccaccagc gtgctcttcc ccgacccgct ggggcccacg agcgcgacga cgtcgcctcg
      121 acgcgcgacg aagctcacgt cgcgcagcac cggctcgtcg tcgtaggcga acgacacgtg
      181 ctggaactcg atcgcgtccc gcagccccga caccgcgatc gtcccgcggt cgagctgttc
      241 ctcggtcggc aggtcgagca cctcgaacag ccgctcggcc gacgcgaacg actgctgcgc
      301 cgtggtcggc gcctgcgaga gctgcttgag cggcgggagc aggcgcatca ccatgatcat
      361 gaaggtgatg agggtcgcgc tgtccatcga gccggtgccg gacagcacct cgcgcgcgcc
      421 gatccacagg atcagcatgg ccaccgacgt gccgatcatc tccgtcatcg gctgcgacag
      481 cgatgcgacg cgggtgatgc gcaccatgcc cgatgaatag cgatggctgg cgtcggtgaa
      541 ccggcggtcc tcgtacggct cgccgcggaa cgacttcacg agtcgcacgc cgctcacgac
      601 ctcctggagc acgctcgtga tctccccgta gtcgccgcgc agccgccggt ggcccttgcg
      661 cagcttgcgc agcaccggct ggagcgacag ggtgagcagc ggcgcgatga ccagcgccac
      721 gaacgtgagc ttcaccgagt agttgagcag gatgacgatc gtgccgacga tctgcgccag
      781 gttctggagc gtgcgcgtca ccagctccgt gatgagcgcc ttggtctgct cggtgtcggc
      841 gagcacgcgc gagatgatct gccccgtctt ggtgcgctgg aagtagccga gcggcagccg
      901 ctggagatgg cggaacacgc cgtcgcgcag gtcgcgcgtg acgttctcct ggagcgaggc
      961 gccgagctgc ccgccgagcc acacgaacac gttcttgagg gcgacgatgg cgatgatcgc
     1021 gaccatcatc acctcgacgg agccgaggcg gtcggccgga ttcaggaagg cgccgacgag
     1081 ctgctgctgg agccgcgtga tccaggtggg cgacgtgctc gggatgagct gcgcctcgcc
     1141 gaacaacgcg ttcaggaagg ggacgagcag ggtgaacgag aagacgtcga gcgcggcggc
     1201 aacgacgttg caggcgatcg tcccggccat ccgccacgag tgcgggcgca ggtagcgcag
     1261 caggcgtgcg tacatgcgct accggcgggg cgtgaggagc gacaccggca ggatgcactc
     1321 ctccggcgtg acgccgccgt gcaggaacga gccgcgatac cggctctggt actcgcgcag
     1381 cttggtggga tagacgaaga agctgtcccc cgtggcgagc agcgtgttgg cgcccagccc
     1441 gcggcggggg agcttcagcg cctcctcgtc cttgaacagc agggcatagt cgggattctc
     1501 ggcgcgcagg tcctcgccga acttgtagcg caggttctgc gtggcgtcgc gccgcgcgaa
     1561 cacggtggcc ggcgtgtggc agtggatgga gccgtggtcg ctcgtcacga gcaccttcac
     1621 cttccgccgc gccgcctcct ggagcacgct gaacagcgcc gagcgcttga accactggag
     1681 ggtgagctgc cggagcgcga tctcgtcgcg cgccacctcg tacaggatcg ccgactccga
     1741 gcggccgtgc gtgagcaggt ccacgaagtt gaacacgaac gcgctgatcc cgtcgggcgc
     1801 gatcgcgttg gcgagccgcc gctccagctc gtccgcgtcg tgcgacgacg agatcttgtc
     1861 gtacttcacg ggcgcgcggt ggccgatctc cacgagctgc gcctcgagca gctcgcgctc
     1921 gtgcgcgttc agcgtctcgt cctcccgctc gccccaccaa tcgggaaagc gcgcggcgat
     1981 ctcgttggga aagagcccgc tgaacagcgc gttgcgggcg tacggcgtgg ccgtcggcag
     2041 cacgccgaag tagtgcgtgg tctcgatctc gaacagctga gcgaccaccg gctcgatcac
     2101 cttccactgg tcgaggcgca ggcagtcgat cacgatgaac accgcggcgc ggtcctggcg
     2161 cacgatcggc atcaggaact cgttcacgat gtcgatcgag agcggcgggc ggtcgccgtc
     2221 cagcgccgcg agccactcgg ggtacgcggt ggacatgtac agcgcgaact ccctgcgcat
     2281 ctcgggaaag agcccgcgca gcgaatcgtg cagccccatc tcgttcgcgc tcgcgaggtc
     2341 gaggtcccac tgcaccagct cgagatagcg gtcgatccac ccccgccagt cgaggtcgcg
     2401 gggcgactcg ttctgcatgg cgcgaaaccg gtcgacgaag gcgcgcgcga ccgcctgctg
     2461 gcggatgcgc ggcccttcca gcaggcgggc caccatcgcg tagacctgcc gcggcgtcac
     2521 cggcttcacg agatacccgg tgatgtcgcg gccgagggcc tcggtgaggg tgttgtcctc
     2581 ctcgctcttg gtgaccatca cgacctggag gccgggctcg atgtcgcgca gctcgcggag
     2641 cgcctcgagg ccgcgcgtcc ccggcatctg ctcgtcgagc aggacgaggt cgtacggccg
     2701 tcgccgcacc atctcggcgg cgtcgtcggc attggtggcg gtctcgacgt cgaacccctt
     2761 gtcacgcaag aagatgcggt gaggctcgag gagctccgcc tcgtcgtcga cccagaggac
     2821 ggccttgacc tggaacggca tgacgtaaac gtagcacctg tggagagggc gaggaacgat
     2881 ggcgcagtgc cgccaaagcg cggccttccg gggcgccggc ccttcgcatc acatttcccg
     2941 cgtgcaatcc cccctgcctc cgtacgcgct cccgaccccg acctttccct ttccgcatct
     3001 cgcggggctc gcggggcggg cgcccatcgg cggggcacgg gaggtggcgc tggcctgctt
     3061 cgtggcggcg cgcctggcgg ccgacgcgat gggcgggaac ggcgacccgt cggcgcgctc
     3121 ggcgcgctcc gccggagcga gggggtggct gggcacgctc gcgctgcccc cggccgtgcg
     3181 cggaccgctc ttcaagtgca tcgagaccac ggcggatggg tcggccggag cggtcggtcg
     3241 ggagctggcg gaggtcgcga ccgcaggcgc cgcctatctg gactccgcct cgcgaaccga
     3301 gctcgacgcc ctggttgccg ccctgcgcgg ctgagcgcgc acccggcaga aatttccttg
     3361 ctccaccctg cggccgagcc ctatctttgg agatgccgcg cggcgctgac atctcccccc
     3421 tgtcgctcct gctgggccgc gtcgatgccg tagccgatgg tgctacgcct gccgatacgg
     3481 tcccgtccgg tttccccagc ctcgacaagc tcctcggcgg cggcctccgt cgcggggacc
     3541 tcgtggtcct cggcggcgac gtcgggagcg gcaagagcgc cctggccctc gccatcgcgc
     3601 tccgggtttc ccagcagggc cgctcgacgc acttctattc aggtgagatg gtcgtggagc
     3661 gcgtcctcga gcgcgcactc gccatcgagg ggcgcacgcg gatcgacgat ctgcggcgcg
     3721 gctcgatgga cgaggcgacg cgcgccgggg tgggcgccgc cgccatccgc ctgcgcgacg
     3781 agctgccggt catcgagcgg attcccgcgg ggggcgtgtc ggcgatcgcc gaggaagttc
     3841 aggccgtccg cggagtggag ctcgtggtcg tcgatggtct ggacgccctg ctccccagcg
     3901 cgcgcgaaag cgcggaggag caggccgccg cggtgcgcgc gctcaagcag ctcgcgctcg
     3961 acgccaaggt ggccgtcctg ctcaccactc ccctgcccaa cctgagtcat cgcgacgacc
     4021 ggcgtccgct gctggacgac ttcggcgccg ccggcgccgt gaaggaacgc gccgacgtgg
     4081 tgctcggcct gttccgcgaa ggcatgtacg agagcgcgcg cgggatcgag ggcgcgacgg
     4141 agttgctggt gcggaagaac cgcaacggcg ggatcggcta cgcggacctc tatttctacg
     4201 cgcagtggat gcgcttcgag gacatgctcg accccgaccg ctaggaggcg gccgcatgcg
     4261 tatccgctcg tcgacgctct ccctggcgct cgcggtgctg ctgggcgcct gtgccaccgg
     4321 tcgcgcgatc tccacgccca ctcccgatgc cgtcgcgcgg ctcgagcgcg cacagcgcgg
     4381 cacgccagcg tccgcatcgg tgaaccgcgc actcggcatc gcgtactacc agcttggtcg
     4441 tctcgccgac gcgcgtgccg cgctcgagac ggcagcgcgc ctcgacgcga aggacggaac
     4501 gacatcgctg tacctcggca tgacggccga agcgcagaac gatctgccgg cggcgaagcg
     4561 tgcgtatgcc tcgtatctcc agttcggtcg cacgagccgg gtgcgcgcac agctgcagtc
     4621 gcatctcgca tcgctcgcac gaaaggagct cgcgctggag gcgaaggccg ccgtgcagca
     4681 ggaagcatca ctcggcacga cggacggatc gccgcgcacg gtggcggtgc tgcctcttcg
     4741 cttcagcgga gccgacagct cgctgcgtcc gctcgagcgc ggattcgccg atctgctcac
     4801 cacggatctc gggcgctcgt cgcagctcac gctggtggag cgcggtcgcc ttcaggcgct
     4861 gctcgacgag gtggctctcc agtccagcgg cgcgaccgat tcggcgagca acgtgcgcgt
     4921 cggtcgtctt ctccgcgcgg gacggctcgt gcagggctcg ctgctccagc tgccgggctc
     4981 ccagcttcgc gtggatgccg ccgtcgtgaa cgtgccgacg acgcagatcc aggggacggc
     5041 gcagggggac gatcagctcg atgcagtgtt caatctcgag aagaagatcg cgctcgacct
     5101 gttccgcgag ctcggcgtca cgctgacggt ggcggagcgc aatgcggtcg aacaacgacc
     5161 gacgcgatcg ctcgccgcgt tcgtctcgta ctcgcgcggg ctcgtggccg aggatgaagg
     5221 acggtgggac gatgccagcc gcttcttcga cgacgccgtg cgcctcgatc cgggattcag
     5281 cgcggcgcaa cggcgcagca gcgaatcgcg tgcgatctcg gcgggagcag cggtcacctc
     5341 ctccacgatc cagacgggct tgcagggcac gacggaaggc tccgtcgtag ccgcggcgag
     5401 tggtggcacc gccacagtga gcggcggctc gctcggtggc acgctcgcga tgacgaccga
     5461 cggcgtgaac gcttcgacgg cgcagggtgc gacggcgggc gcggccacca cggctgcagc
     5521 gccgctcgcg ccggtggtcg atgcggtgtc ggcggcgacg ggggcggaca agccgaccac
     5581 gacgggcgtc atcacgatca cgctgccacg gcccaagctg ccatgatgcg tcgtgcgctc
     5641 gcgctcgcgg cgctcggcac gctgctcgcg ccaacgtggc gcgccggcgc ccagtccgtg
     5701 ttcgacagcg agctccggct cgcgccgcag tttctccagt atcggctgaa ggatccggcg
     5761 ggggagacga tttcgcaggt cgccgttccg ctgttcgttt ccgtgccgct gtccgagcgg
     5821 ctcaccatcg atgtcggaac gtcgtacgcg cggtcccgcg tcgtcgccgg cggcgccgcg
     5881 agcgagatca gcgggctcac cgacacgcag gtgcgcggca acctcacgct c
//
LOCUS       DASSYW010000970         2429 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1598068, whole genome shotgun sequence.
ACCESSION   DASSYW010000970 DASSYW010000000
VERSION     DASSYW010000970.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2429)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2429)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2429
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1598068"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1058)
                     /gene="secY"
                     /locus_tag="VFN38_15305"
     CDS             complement(<1..1058)
                     /gene="secY"
                     /locus_tag="VFN38_15305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HET9013192.1"
                     /translation="MAQSNAAAAVSNLFRTPELKDKILFTLLCLLIYRVGAHVTAPGV
                     DVQALTDFFRNQSQSGGGLLGLYDLFTGGQLSRATVFALGIMPYISSSIFVQIAGAVV
                     PQVEKMQKDEEGRKKINQWTRYGTVVLAAVQAWGFALFTESLEGAIATPGFAFRLQMT
                     FFLTTGALFVMWLGEQITERGLGNGASLIIFFSIVERIWPGIGTTFGFVSTGAIGAFS
                     LVVLAAIMVAVVAGVVAITMAARRILIQIPQRTMARGRMREAARSFIPLRINTAGVMP
                     IVFAQSIIVVPGAFAQFFPQYPAAARLAELFNPGSIWYLILSAILILFFTYFYTSIIF
                     NPIDLAENLKKQGGFIPGV"
     gene            complement(1084..1524)
                     /gene="rplO"
                     /locus_tag="VFN38_15310"
     CDS             complement(1084..1524)
                     /gene="rplO"
                     /locus_tag="VFN38_15310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011095501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HET9013193.1"
                     /translation="MGLHNLSPAPGSSRDRKRIGRGPGSGTGKTSGKGHKGIKARSGH
                     HGPGGGKPGFEGGQMPLTRRLPKRGFTNPFRQEANVIRLDQLALLDGDVTPDALRSAG
                     LVKRQGPVKVLANGELTQAVTVRGLKVSASARQAIVAAGGKVEE"
     gene            complement(1544..1795)
                     /gene="rpmD"
                     /locus_tag="VFN38_15315"
     CDS             complement(1544..1795)
                     /gene="rpmD"
                     /locus_tag="VFN38_15315"
                     /inference="COORDINATES: protein motif:HMM:TIGR01308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HET9013194.1"
                     /translation="MARTFVWHPGKGPKTTGKNELTTGKVRIKQVRSGIGHSWRMKAT
                     LEAIGLKHHQDEVIKQDSPALRGQLKQVRHLVEVVPVEE"
     gene            complement(1795..2295)
                     /gene="rpsE"
                     /locus_tag="VFN38_15320"
     CDS             complement(1795..2295)
                     /gene="rpsE"
                     /locus_tag="VFN38_15320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016196837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000312 - plastid small ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HET9013195.1"
                     /translation="MIENVVAINRVAKVVKGGRRFSFNALVAVGDGQGKVGFASGKAN
                     EVSEAVRKAVEAARRNLVQVPLTGATIPHEVTGKHGAGEVWMKPAAPGAGVIAGGAVR
                     AVMECVGITDILTKSLGSTNPHNMVRAAMDGLAQLTTVDQIARERGIDPAKLGYRSRG
                     TSKVTL"
BASE COUNT          357 a          879 c          811 g          382 t
ORIGIN      
        1 acgccgggga tgaagccgcc ctgcttcttc aggttctccg ccaggtcgat cgggttgaag
       61 atgatcgacg tgtagaagta ggtgaagaac aggatgagga tcgccgagag gatcaggtac
      121 cagatgctgc cgggattgaa cagctcggcc agccgcgccg cggcgggata ctgcgggaag
      181 aactgcgcga acgcgcccgg cacgacgatg atcgactggg cgaacacgat cggcatcacc
      241 cccgcggtgt tgatgcgcag cgggatgaag cttcgcgccg cctcgcgcat ccggccccgc
      301 gccatcgtgc gctgcgggat ctggatgagg atgcgccgcg cggccatcgt gatcgcgacg
      361 acgccggcga cgaccgccac catgatcgcc gcgagcacca ccagcgagaa cgccccgatc
      421 gcgcccgtcg acacgaagcc gaacgtcgtc ccgatgccgg gccagatgcg ctcgacgatc
      481 gagaagaaga tgatcagcga cgccccgttg ccgagcccgc gctccgtgat ctgctcgccc
      541 agccacatca cgaacagcgc gccggtcgtg aggaagaagg tcatctggag ccggaaggcg
      601 aaccccgggg tggcgatcgc gccctccagc gactccgtga acagcgcgaa gccccacgcc
      661 tgcacggcgg cgagcaccac cgtgccgtag cgcgtccact ggttgatctt cttccggccc
      721 tcctcgtcct tctgcatctt ctcgacctgc ggcaccacgg cgccggcgat ctggacgaag
      781 atgctcgagg agatgtacgg catgatgccg agcgcgaaca ccgtcgcgcg cgacagctgg
      841 ccgccggtga acaggtcgta gaggccgagg agaccgcccc cgctctgcga ctggttgcgg
      901 aagaagtccg tcagcgcctg gacgtcgacg ccgggcgccg tgacgtgcgc gccgacccgg
      961 tagatcagca ggcacaggag cgtgaagagg atcttgtcct tcagctccgg cgtgcggaag
     1021 aggttcgaga ccgccgcggc ggcattgctc tgggccatga aactgctcct gggtggtgcg
     1081 gcgttactcc tcgaccttgc cgcccgcggc gacgatcgcc tggcgcgcgg atgcactgac
     1141 cttgaggccg cgcaccgtga ccgcctgcgt gagctcgccg ttggccagca ccttcaccgg
     1201 tccctgacgc ttcacgaggc cggccgagcg cagcgcgtcg ggcgtcacgt cgccgtcgag
     1261 cagcgcgagc tggtcgagcc ggatgacgtt cgcttcctgg cggaacgggt tcgtgaagcc
     1321 gcgcttcggc agccggcggg tgagcggcat ctggccgccc tcgaagccgg gcttgccgcc
     1381 acccgggccg tgatggcccg agcgcgcctt gatgcccttg tgtcccttgc ccgacgtctt
     1441 gccggtgccg gagcccgggc cgcgcccgat ccgcttccgg tcccggctcg agccgggcgc
     1501 gggcgagagg ttgtgaagtc cgatcttgtc cgtcgccact gtcttactcc tcgacgggca
     1561 ccacctcaac gaggtggcgc acctgcttga gttgtccacg aagggcgggg gaatcctgct
     1621 tgatcacctc gtcctggtgg tgcttgaggc cgatcgcctc gagagtcgcc ttcatccgcc
     1681 acgagtgccc gatgccgctc cggacctgct tgatccggac cttgcccgtg gtcagctcgt
     1741 tcttgccggt cgtcttgggc cccttgccgg ggtgccatac gaatgtgcgt gccattagag
     1801 ggtcaccttc gacgtgccgc gcgaacggta gccgagcttc gccggatcga tcccgcgctc
     1861 gcgcgcgatc tggtccaccg tcgtgagctg ggcgaggccg tccatcgccg cacgcaccat
     1921 gttgtgcggg ttcgtcgagc cgaggctctt cgtgaggatg tcggtgatcc cgacgcactc
     1981 catcaccgcg cgcaccgcac caccggcgat cacgccggcg cccggcgccg cgggcttcat
     2041 ccagacttcg cccgcgccgt gcttgcccgt gacttcgtgc gggatcgtcg cgcccgtgag
     2101 cggcacctgc accaggttgc ggcgcgccgc ctcgacggcc ttgcggaccg cctcggagac
     2161 ttcattcgcc ttgcccgacg cgaagcccac cttcccctgc ccgtcgccca cggcgacgag
     2221 cgcgttgaag ctgaaccggc gtccgccctt cacgaccttg gccacgcggt tgatcgcgac
     2281 cacgttctcg atcaggtcgc tcccctcgcg atcggcgccg ccgcggctgt cgccaccgcg
     2341 cccgccgcca ccgccgccac gcccgcggtc aggcccgccg ccggggcccc caccgggacc
     2401 gccgcgaccg ccgccgggac cgccgcgac
//
LOCUS       DASSYW010000971         3186 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1616768, whole genome shotgun sequence.
ACCESSION   DASSYW010000971 DASSYW010000000
VERSION     DASSYW010000971.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3186)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3186)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3186
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1616768"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(135..1067)
                     /locus_tag="VFN38_15325"
     CDS             complement(135..1067)
                     /locus_tag="VFN38_15325"
                     /inference="COORDINATES: protein motif:HMM:TIGR03508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DmsE family decaheme c-type cytochrome"
                     /protein_id="HET9013196.1"
                     /translation="MRQLPLLFLAAVLGTAPAMARAQVPAPAAQAANKPPPGYAGSAS
                     CVDCHRAASAEFAETNKGRLFLAHPRDGHEKLGCESCHGPAMQHVESGGEERGGLITF
                     GRKAPSPVAVRNATCLGCHQKTARTLWQGSVHESRNVACSDCHEMMHAESERGGLKRQ
                     SVVETCGGCHAEKKAKLSRFSHMPLGEGKMECTSCHNPHGSANEKMLVGNSVSATCAS
                     CHAEKRGPFLWEHMPVVESCANCHDSHGSNKERMLRISRPRLCQQCHPTAHGSPTAKP
                     SDPAAVRFVYNRQCSNCHFNIHGSNHPAGAFFTR"
     gene            complement(1128..1457)
                     /locus_tag="VFN38_15330"
     CDS             complement(1128..1457)
                     /locus_tag="VFN38_15330"
                     /inference="COORDINATES: protein motif:HMM:NF024834.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HET9013197.1"
                     /translation="MLAAALLAVGGAASTAAAQAPDAPALYAANCKKCHGVIGTPPKT
                     MKAKFPKIATFDAAFIAERSQDSIVKVLLKGAGKGDDMKSFRGKMTEAEIEAVAAYVR
                     ELGKKAP"
     gene            complement(1469..2965)
                     /locus_tag="VFN38_15335"
     CDS             complement(1469..2965)
                     /locus_tag="VFN38_15335"
                     /inference="COORDINATES: protein motif:HMM:NF025016.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b N-terminal domain-containing
                     protein"
                     /protein_id="HET9013198.1"
                     /translation="MAPIARWIDERIELAALRRSLLDREVPGGLTWWHTLGSATLAVF
                     VVQVVTGVVLAMYYSPSPDHAYDSISYLERGVASGAMLRGLHHWGASAMVVLALAHLI
                     RVFTMGAYKYPREINWLLGVVLLALVLGFGFTGYLLPWDQKAYWATQVGTSIAGTTPV
                     VGNLLVKVLRGGSQLGAATLSRFYALHVLLLPLLFGIVVLVHLGLVIRQGIAPRTKVL
                     EDGAPPRTDDPAYPPYYHASYRRSKGAGVRFWPDIIAKDLVTAMVVIVVLALLAYFSG
                     AGLEAPADPTDSVYVPRPEWYFLPFFQLLKLVPGSMEAVVAVGIPSALVLVLLLLPFF
                     DRRSIRSLRHRPVAAASMLGLLGSAGLLLGASMRDYQAAAPESGRPLTPVERAGRALF
                     RQQQCGSCHQVGSQKVEKKDPDTPDAPDLTEVGLRHSPAWTHSFMEEPTRFHADSKMP
                     SFGPPTLTHQEIEELTQYLASLRGPDGLRKQPEYRDTFPEPVKPMEKP"
     gene            complement(2970..>3186)
                     /locus_tag="VFN38_15340"
     CDS             complement(2970..>3186)
                     /locus_tag="VFN38_15340"
                     /inference="COORDINATES: protein motif:HMM:NF012575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HET9013199.1"
                     /translation="CTHLGCGFTLSPDKKSFLCPCHRGQFDIKTGAVLAGPPPRPLDE
                     LAVQIRDSAVFVQYKDFRLGSAERVES"
BASE COUNT          488 a         1090 c         1108 g          500 t
ORIGIN      
        1 cgccgaaccg gcccctcgtg gagtcctggg cccatccggg cgtcgcctgg ccgaacgcca
       61 gcagcccgcc gacgacgagg cacgcggcag cagtcgtctc gattcgcatg acagtcctcc
      121 cgtcgtgcag ccggctacct cgtgaagaag gcgcccgccg gatggttcga cccgtggatg
      181 ttgaagtgac agttggagca ctgccggttg tacacgaacc gcacggcggc cgggtcgctc
      241 ggcttcgccg tcggcgatcc gtgggccgtg ggatggcact gctggcagag ccgcggccgc
      301 gagatccgga gcatccgctc cttgttgctg ccgtgagagt cgtggcagtt ggcgcagctc
      361 tccaccaccg gcatgtgctc ccacaggaac ggcccgcgct tctcggcgtg gcagctggcg
      421 caggtggcgc tcaccgagtt gccgacgagc atcttctcgt tggccgagcc gtgcgggttg
      481 tggcagctcg tgcactccat cttcccctca ccgagcggca tgtgggagaa gcgggacagc
      541 ttcgccttct tctcggcgtg gcagccgccg caggtctcca ccaccgactg ccgcttcagg
      601 ccgccgcgct ccgactccgc atgcatcatc tcgtgacaat cgctgcacgc cacgtttcgc
      661 gactcgtgga cgcttccctg ccatagggtg cgcgccgtct tctggtgaca gcccaggcag
      721 gtcgcgttgc gcaccgcgac cggcgagggc gccttccggc cgaaggtgat cagtccgccg
      781 cgctcctcgc ccccggactc cacgtgctgc atggcggggc cgtggcagct ctcgcagccc
      841 agcttctcgt gcccatcgcg cgggtgagcg aggaacaacc gccccttgtt cgtctccgcg
      901 aactcggcgg acgcggcgcg gtggcagtcc acgcagctcg cgctgcccgc gtagccgggt
      961 gggggcttgt tcgccgcctg ggcggcggga gcgggcacct gcgcccgggc catggccggc
     1021 gcggttccga gcaccgcagc caggaacaac aaaggcagct gtcgcatgtc gcctcctcca
     1081 gcgcggcacc gcgaggttcc gcgtcgctgg tgaccaccgg tggccgacta gggggccttc
     1141 ttgccgagct cccgcacgta tgccgcgacc gcctcgatct cggcctcggt catcttgccc
     1201 ctgaaggact tcatgtcgtc ccccttcccc gctcccttca gcagcacctt cacgatggaa
     1261 tcctgtgaac gctcggcgat gaaggcggca tcgaaggtcg cgatcttcgg aaacttcgcc
     1321 ttcatggttt tcggtggcgt accgatcacg ccatggcact tcttgcagtt cgccgcgtag
     1381 agcgcgggcg catcgggggc ctgggccgcc gcagtggagg cggcgccgcc gacggccagc
     1441 aacgcggcgg cgagcacgaa tcgagtcatc acggcttctc catgggtttg acgggctccg
     1501 gaaaggtgtc gcgatattcc ggctgcttcc tgagaccatc ggggccgcgc agcgacgcga
     1561 gatactgcgt gagctcctcg atctcctggt gcgtgagcgt cggcggaccg aacgacggca
     1621 tcttggaatc ggcgtggaag cgcgtgggct cctccatgaa gctgtgcgtc cacgcgggcg
     1681 agtggcgcag gccgacttcg gtgagatcgg gcgcgtcggg ggtgtccgga tccttcttct
     1741 ccaccttctg gctgcccacc tgatggcagc ttccgcactg ctgctgcctg aagagggcgc
     1801 gcccggcgcg ctccaccggc gtcagcgggc gcccgctttc gggcgcggcg gcctggtagt
     1861 ctcgcatcga ggctccgagc aggagccccg cgcttccgag cagtcccagc atcgacgccg
     1921 ccgcgaccgg ccggtgccgc agcgaccgga tgctccggcg atcgaagaag ggcagcagga
     1981 gcagtaccag cacgagggcg ctgggaattc ccacagcgac caccgcttcc atggatccgg
     2041 gcacgagctt gagcagctgg aagaagggga ggaagtacca ctcgggtcgc ggcacgtaca
     2101 ccgagtcggt gggatcggcc ggcgcttcca gccccgcgcc ggagaagtac gcgagcagcg
     2161 ccagcaccac gatcacgacc atcgccgtga cgagatcctt ggcgatgatg tcgggccaga
     2221 atcggacgcc ggcgcccttc gaccgccgat agctggcgtg gtagtacggc gggtaggcgg
     2281 gatcgtcggt gcgcggcggc gcgccgtcct ccagcacctt cgtccgcggc gcgatgccct
     2341 gccggatgac gaggccgagg tgcacgagga cgacgatccc gaacaggagg ggcaggagca
     2401 gcacgtgcag ggcgtagaac cgcgacaggg tcgccgcgcc gagctgggac ccgccgcgca
     2461 gcaccttcac gagcagattg cccacgaccg gcgtggtgcc ggcgatgctc gtcccgacct
     2521 gcgtggccca gtatgccttc tggtcccagg gcaggagata tccggtgaag ccgaacccca
     2581 ggacgagcgc gagcaggacc acgccgagca gccagttgat ctcgcgtgga tacttgtatg
     2641 cgcccatcgt gaacacgcga atgaggtgcg cgagcgcgag gacgaccatg gcggacgcgc
     2701 cccagtggtg cagcccccgg agcatcgcgc cgctcgccac gccgcgctcg aggtagctga
     2761 tgctgtcgta ggcatggtcg ggcgagggcg agtagtacat ggcgagcacg acgcccgtca
     2821 ccacctgcac cacgaacacc gccagggtgg cgctgcccag cgtgtgccac caggtgagcc
     2881 cgcccggcac ttcgcgatcg agaaggcttc gccggagcgc ggccagctcg atccgctcgt
     2941 cgatccaccg tgcgatgggg gccatggcgt cagctctcca cgcgctcggc ggagccgagg
     3001 cggaagtcct tgtactgcac gaacaccgcg ctgtcgcgga tctgtactgc gagctcgtcg
     3061 agcgggcggg ggggcggtcc ggcgaggacg gcgccggtct tgatgtcgaa ctgtccccgg
     3121 tgacacggac agaggaagct cttcttgtcg ggcgagagag tgaatccgca gccgagatgc
     3181 gtacag
//
LOCUS       DASSYW010000972         2107 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_920617, whole genome shotgun sequence.
ACCESSION   DASSYW010000972 DASSYW010000000
VERSION     DASSYW010000972.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2107)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2107)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2107
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_920617"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(189..587)
                     /locus_tag="VFN38_15345"
     CDS             complement(189..587)
                     /locus_tag="VFN38_15345"
                     /inference="COORDINATES: protein motif:HMM:NF023621.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3597 domain-containing protein"
                     /protein_id="HET9013200.1"
                     /translation="MSIFGTIMGKIMGNSARKQAAAENAARAANAPAAAPASAAAVAT
                     PVAEVDVAARLDELKAASKQTLDWRVSIVDLMKLLGIDSDITNRRALAHELGYTGDLN
                     DSATMNVWLHKQVMKKLAENGGKVPANLLD"
     gene            complement(703..1131)
                     /locus_tag="VFN38_15350"
     CDS             complement(703..1131)
                     /locus_tag="VFN38_15350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013201.1"
                     /translation="MHVTFALFADAANLSQEGKLNILGVFDALQVGTLPALHPRATLV
                     VHLKGSAADAGNHRVSLQWMSPSGEELWSSDGELGIAAPPQGVLEMDFPLIAQLDLPL
                     DLAGGYVMRVGLDGTTHAEVPVQVRTAATAPVAPASAWMS"
     gene            1194..>2107
                     /locus_tag="VFN38_15355"
     CDS             1194..>2107
                     /locus_tag="VFN38_15355"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HET9013202.1"
                     /translation="MASSLRAAEVRPAPAHHHGVTVTDLLLLLMALIWGVNFAVVKFA
                     TGAFAPLAFNFLRVGLATVVMFGLVWAGGHALPRGRDRLVLLGLGTLGNGLYQVLFIE
                     GIARTRAGDAALLIAAAPALMAIIGWLRGSEHTGPRGVAGILVSLAGIALVVFGDAGG
                     AGGGNATLLGDALILLACLCWSLYTVLLKPYTERIDGIPLSAMTMAGGALPLLLVSLP
                     SLARTDWPAVSAGAWAAVGYSGLFALALAYLFWYRGVKLLGPTRTGMYSNLQPVIALL
                     VAWATLGESPHLAQLAGAVCILSGLVLTR"
BASE COUNT          250 a          761 c          743 g          353 t
ORIGIN      
        1 cgcaggcgtg gcacttcttc gcgttctgcg ggatcgatga gcagcaccag gggcaggcac
       61 gctcggcgac gggtgcgagc ggctcgcgct gcgcgcgagt gtacggggcc gtggccagca
      121 tccggcgtcg ctcctgtgga ggggatgagt gcccctacga gccggagcgc gcgccggtgt
      181 ccgacgggtc agtcgagcag gttggcgggc acctttcccc cgttctccgc cagcttcttc
      241 atcacctgct tgtgcagcca cacgttcatc gtggcgctgt cgttcaggtc accggtgtag
      301 ccgagctcgt gcgccagcgc gcggcggttg gtgatgtcgc tgtcgatgcc gaggagcttc
      361 atcaggtcca cgatcgacac gcgccagtcc agcgtctgct tcgatgcggc cttcagctcg
      421 tccagccggg cggcgacgtc cacctcggcc accggcgtcg caacggctgc cgccgaggcc
      481 ggggcggccg cgggagcgtt cgcagcgcgc gcggcgttct ccgccgcggc ctgcttgcga
      541 gcgctgttgc ccatgatctt gcccatgatc gtgccgaaga tgctcatctc gtccccctga
      601 atggtggtgc gtccgcgacg gcgcgccgcg aacggggtaa cgagaagcaa ggagccagcc
      661 gcggcgctgc cggtcgatca gagcgaccgg ggcccggcgc tctcagctca tccaggcgga
      721 ggcgggggca accggggcgg tggccgccgt acgcacctgc accggcacct ccgcatgcgt
      781 cgtcccgtcc aggccgacgc gcatcacgta tccccccgcg aggtccaggg gcaggtcgag
      841 ctgcgcgatg agcgggaagt ccatctccag cactccctgc ggcggcgcgg cgatcccgag
      901 ctcgccgtcg ctgctccaga gctcctcccc gctggggctc atccactgaa gtgagacgcg
      961 gtgattgccg gcgtccgccg cagatccctt cagatggacc accagggtgg cgcgcgggtg
     1021 cagcgctggc agggtgccga cctgcagcgc gtcgaacacg ccgaggatgt tgagcttccc
     1081 ctcctgcgag aggttggccg cgtcggcgaa cagggcgaag gtcacatgca tgcagcgaag
     1141 ctagcggcgc gccgcgcggt ttgcgacggc ccttcgcccc cctagctttg gggatggcat
     1201 cgtcactccg cgcggccgag gtgcgtcccg cgcccgcaca tcatcacggc gtcaccgtca
     1261 ccgacctgct gctgctgttg atggccctga tctggggcgt caacttcgcc gtggtcaagt
     1321 tcgccaccgg cgccttcgcg ccgctcgcct tcaacttcct ccgcgtcgga ctcgccaccg
     1381 tggtgatgtt cggcctcgtc tgggccggcg gccacgcgct gccgcgcggt cgtgatcgtc
     1441 tcgtcctgct gggcctcggc accctgggca acggactgta tcaggtgctg ttcatcgaag
     1501 gaatcgcgcg cacgcgcgcc ggggacgccg cgctgctcat cgccgccgcg ccggcgctga
     1561 tggccatcat cggctggctg cgcggcagcg agcacaccgg gccgcgcggc gtcgccggca
     1621 tcctggtgtc cctcgccggg atcgcgctcg tggtgttcgg cgacgccggc ggcgccggcg
     1681 gcgggaacgc caccctgctc ggcgacgcgc tcattctcct ggcctgcctg tgctggtcgc
     1741 tgtataccgt gctgctcaag ccgtacaccg agcgcatcga cggcatcccg ctgtcggcga
     1801 tgacgatggc cggcggcgcg ctgccgctgc tgctcgtgtc gctgccgtcg ctcgcgcgca
     1861 ccgactggcc ggccgtgagc gccggcgcgt gggccgcggt gggctacagc gggctgttcg
     1921 cgctcgcgct ggcgtacctg ttctggtatc gcggcgtgaa gctcctcggc cccacccgca
     1981 cggggatgta ctccaacctg cagccggtca tcgcgctgct ggtcgcctgg gccacgctcg
     2041 gcgagtcgcc gcacctcgcg cagctcgccg gcgcggtgtg catcctgtcc ggcctggtgc
     2101 tcacgcg
//
LOCUS       DASSYW010000973         3058 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1318357, whole genome shotgun sequence.
ACCESSION   DASSYW010000973 DASSYW010000000
VERSION     DASSYW010000973.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3058)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3058)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3058
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1318357"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1520)
                     /locus_tag="VFN38_15360"
     CDS             complement(<1..1520)
                     /locus_tag="VFN38_15360"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase family protein"
                     /protein_id="HET9013203.1"
                     /translation="MTAERAGWRGDIEGLRSLAIVPVVLFHLDRTYAPGGFLGVDLFL
                     VISGYLIARMLLTGSYLDSVDGIRRFLRRRFLRIMPALAVTVAATSLVFVWLALPVHH
                     RPFFVTGLASLVGVSNVQLARLSTDYFAPAAGLNPFLHTWSVSIEDQFYVGFVLLLAL
                     AARVAGMRRLPAVIVVATVVAVEYAWLNPAPPGTPGFFSLRLRAWEFLLGATALVVQD
                     ALTRRDRAWPEPVRWVSLLAILWAIVRGSGTGDVHQYVLCVACAPLLVRTTPMTPSLL
                     SRGLAHGALRAIGRRSFAIYLVHFPLLKLFELFTDAGRTAPVMGVVYLGATALLAELL
                     HRGVERPYVQSYRDPGTEALRGRPRGGVLWASAVAVAAIALVALPRVSLSRTLVPRLA
                     RTTPRDYPGSGPEIILLGDSHAQQLYPALLEIRRSDSIAVVDRTMIGCLPSEELTFVR
                     DGAAQPGCQYIVRDIVANAVAHPRPRRVVLIAMRAQAYLSDRRISRFDRPTDGIMDS"
     gene            complement(1521..2060)
                     /locus_tag="VFN38_15365"
     CDS             complement(1521..2060)
                     /locus_tag="VFN38_15365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaeQ family protein"
                     /protein_id="HET9013204.1"
                     /translation="MALTATIYNFDVQLADVDRGVYETLAFKVACQPSETEEYLMSRV
                     LAYCLEYAEGIAFSRGIAEADVPALSVRDLTGALQVWIDVGAPDAARLHKASKAAPRV
                     AVYTHHEPERYWASLAGERIHRAADIELYAIDRALIDGLVARLDRRNSWELSVTERHV
                     YVAVGGETIEGQLVRFPLA"
     gene            complement(2080..>3058)
                     /locus_tag="VFN38_15370"
     CDS             complement(2080..>3058)
                     /locus_tag="VFN38_15370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HET9013205.1"
                     /translation="AEPWLAAAAIAALSAVNVVGVRPGTVTQNVFTVLKLGAIAALVV
                     SALLAPAITIVSPTAVAATAHATPLAVAIGTALVPVLFAYGGWQQTNFVAEEMVDVER
                     NLPRALVIGVLVVAVVYLAVNLTYLRALGVPALAASRAPAADVMGAYFGETGRRLIAA
                     GIAVSTFGFLNLVILVTPRVYQAMARDGLFFARFAELHPRFRTPVAAIAVQGVWAIGL
                     LLSGSYGALLDYVTFADWIFFGVTAATLFVYRRRDTAAPARYRAPFYPASVTLFCAAC
                     LYVVAGAIASNPWNAVRGAVLLAAGVPVFLFWSRGARWRDDAPRESLGG"
BASE COUNT          541 a         1057 c         1124 g          336 t
ORIGIN      
        1 gaatccatga tcccgtccgt cggccggtcg aagcgtgaga tgcggcgatc cgacaggtag
       61 gcctgggcgc gcatggcgat cagcaccacg cgccggggac gaggatgcgc caccgcgttc
      121 gcgacgatgt cgcgcacgat gtactggcag ccgggctgcg cggcaccgtc gcgcacgaag
      181 gtgagctcct ccgacggcag gcaaccgatc atcgtgcggt cgacgacggc gatggagtcc
      241 gatcgccgga tctcgaggag cgcggggtag agctgctgcg cgtgggagtc gccgaggagg
      301 atgatctccg gccccgagcc gggatagtcc cgcggtgtcg tgcgcgccag gcgcggcacg
      361 agcgtgcgcg acaggctcac ccgaggcaga gcgacgaggg cgatcgccgc caccgcgacc
      421 gccgacgccc agagcacgcc gccacgcggc cggccgcgga gcgcctcggt gccgggatcc
      481 cgatacgact gcacgtacgg ccgctcgacg ccgcgatgca gcagctccgc cagcagcgcc
      541 gtcgccccga ggtagacgac gcccatcacc ggcgcggtgc gtccggcatc cgtgaacagc
      601 tcgaacagct tgagcagcgg aaaatgcacg aggtagatcg caaacgaccg gcggccgatg
      661 gcgcgcaggg cgccgtgcgc gagcccgcgc gacagcaggc tcggcgtcat gggcgtcgtg
      721 cgcacgagca gcggcgcaca ggcgacgcac agcacgtact gatgcacgtc gcccgtcccg
      781 cttccacgca cgatcgccca gaggatggcg agcagcgaca cccaccgcac cggctcgggc
      841 cacgcgcgat cgcgacgcgt gagcgcatcc tggacgacga gtgccgtggc gccgagcagg
      901 aactcccacg cgcgcagccg gagcgagaag aatcccggcg tgccgggcgg cgcgggattg
      961 agccacgcgt actcgaccgc gacgacggtc gccacgacga tcaccgccgg cagccggcgc
     1021 atgccggcga ctcgcgccgc gagggccagc agcagcacga agccgacgta gaactggtcc
     1081 tcgatcgaga ccgaccaggt gtggaggaag gggttcaggc ccgcggccgg cgcgaagtag
     1141 tcggtgctga gccgcgcgag ctggacgttg ctcacgccga ccagcgaggc caggccggtg
     1201 acgaagaacg ggcggtgatg caccggcagc gcgagccaga cgaagacgag cgaggtcgcc
     1261 gcgacggtga ccgcgagcgc cggcatgatg cggaggaagc gccgccgaag gaatcggcgg
     1321 atgccgtcca cggagtcgag atacgacccg gtgaggagca tgcgggcgat gagatacccg
     1381 gagatcacca ggaagagatc gacgccgaga aagccccccg gtgcgtaggt gcgatcgaga
     1441 tggaacagga cgacgggaac gatcgcgagc gagcgcagcc cctcgatgtc gccgcgccag
     1501 ccggcgcgct cggccgtcat ctacgcgagc gggaagcgca ccagctggcc ctcgatcgtc
     1561 tcgccgccca cggcgacgta gacgtgccgc tcggtgaccg agagctccca cgagttccgc
     1621 cggtcgagtc gtgccacgag cccgtcgatc agtgcccggt cgatggcgta cagctcgatg
     1681 tcggcggcgc ggtggatgcg ctcgccggcc agcgacgccc agtagcgctc gggctcgtgg
     1741 tgcgtgtaga cggcgacgcg cggcgcggcc ttgctcgcct tgtgcaggcg ggcggcgtcc
     1801 ggcgcgccga cgtcgatcca cacctggagc gctccggtga ggtcgcgcac gctgagcgcc
     1861 ggaacgtccg cctcggcgat cccgcgggag aaggcgatcc cctccgcgta ctcgaggcag
     1921 tacgccagca cgcgcgacat caggtactcc tcggtctccg acggctggca ggccaccttg
     1981 aacgcgagtg tctcgtacac gccgcgatcc acgtcggcca gctgcacgtc gaagttgtag
     2041 atcgtcgcgg tcagcgccac ggcgtcgtgc ggaagatggt catccgccca agctctcgcg
     2101 cggcgcgtca tcgcgccagc gggccccacg cgaccagaag agaaagaccg gcacgcccgc
     2161 ggccagcagc accgcgccgc gtaccgcatt ccacggattc gaggcgatcg caccggccac
     2221 gacgtacagg cacgcggcgc agaagagcgt gacgctcgcc ggatagaagg gcgcccggta
     2281 gcgcgccggc gccgccgtgt cgcgacggcg atacacgaac agcgtggccg cggtgacgcc
     2341 gaagaagatc cagtcggcga acgtcacgta gtcgagcagc gccccgtagc tccccgagag
     2401 caggaggccg atcgcccaga cgccctgcac ggcgatcgcc gcgaccggcg tgcggaagcg
     2461 cggatgcagc tcggcgaagc gcgcgaagaa cagcccgtcg cgcgccatcg cctggtacac
     2521 gcgcggcgtg acgaggatga cgaggttgag gaagccgaag gtcgagacgg cgatgccggc
     2581 ggcgatcagg cgtcggcccg tctcgccgaa gtacgcgccc atcacgtcgg cggcgggcgc
     2641 acggctggcg gcgagcgcgg ggacgccgag ggcgcggagg taggtgagat tcacggcgag
     2701 atacacgacc gccacgacca gcacgccgat gacgagggcc cgcggcaggt tgcgctcgac
     2761 gtccaccatc tcttccgcca cgaagttggt ctgctgccat ccaccgtacg cgaacagcac
     2821 cggcaccagt gccgtgccga tcgccacggc gagcggtgtg gcgtgggcgg tcgcggcgac
     2881 cgcggtcggc gacacgatcg tgatcgccgg ggcgagcagg gcgctcacga cgagcgccgc
     2941 gatcgcaccc agcttgagca cggtgaaaac attctgcgtc acggtgcccg gacgcacgcc
     3001 gacgacgttg accgccgaca gcgcggcgat cgccgccgcg gcgagccacg gctcggcg
//
LOCUS       DASSYW010000974         3038 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_214503, whole genome shotgun sequence.
ACCESSION   DASSYW010000974 DASSYW010000000
VERSION     DASSYW010000974.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3038)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3038)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3038
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_214503"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(73..1509)
                     /locus_tag="VFN38_15375"
     CDS             complement(73..1509)
                     /locus_tag="VFN38_15375"
                     /inference="COORDINATES: protein motif:HMM:NF013126.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /protein_id="HET9013206.1"
                     /translation="MSGDLQPGRLILPALRAGANGGFSHEAAAIADALELGVGGFIIF
                     GGNAETVRRLTTDLTRRAERPLLLGSDLERGAGQQVEGLTEFPPPLALAALHDAAVAR
                     WAGAVTAQEARAVGINWVFAPVADLDVLPENPIVQTRAFGDDPQRVATLVRSWIEGCQ
                     GAGALACAKHYPGHGRTTLDSHVTLPAVEADRETLQRSDMVPFAVAVESGVAAMMTAH
                     VAFPAFDATGTAATLSAPIMDGLRRGLRFDGLVVTDALIMDGALTGRRESDAAVQALQ
                     SGVDLLLYPKDPRRMREAITGALEGGTLSHERVEQSLRRYDRALAVATRPTPPVRRGP
                     FDSASALADALVGQGMVRGDAPALTGPLDLVIVDDDVGGPYPPSPSDWVARALGPELV
                     GRYTGGSRVALVFAEPRGWKGRAGLGAASLEALATQAADADLVVLFGHPRMVDQLPSD
                     APVLLAWHRQRLLQEAVARWLRGKMRVT"
     gene            complement(1509..2633)
                     /locus_tag="VFN38_15380"
     CDS             complement(1509..2633)
                     /locus_tag="VFN38_15380"
                     /EC_number="2.7.1.170"
                     /inference="COORDINATES: protein motif:HMM:NF007148.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HET9013207.1"
                     /translation="MSERPMVGIGLMSGTSLDGVDAALVRIESPTHATLLDFVTRPYD
                     DAERAELLSALSPGAQADAASFARLHVRIADWAADAIQILLAQTRTPASELGFIAFPG
                     QTVWHEPPTVTWQLGEPAILAERFGVRVVSNFRPRDVAAGGQGAPLVPMADVLLFAAV
                     DHPRVLLNLGGMANITYVPRRAQEEGVFAFDTGPGVAIIDRVAGLVDGRRSYDRDGLI
                     AAKGKPDDAVLAELLGDPFFAAPPPKSTGRERFGDAYARDLHARVPGADGVATAVELT
                     ARTVADAVGSWVPGDAEVVASGGGCHHPGLMAALGRRLDLLSGKHPLRRFDELFFPGD
                     AKEAVAFALLGYLTLHGQPGNVPSATGASGSRVLGSVTPA"
     gene            complement(2630..>3038)
                     /gene="murQ"
                     /locus_tag="VFN38_15385"
                     /gene_synonym="yfeU"
     CDS             complement(2630..>3038)
                     /gene="murQ"
                     /locus_tag="VFN38_15385"
                     /gene_synonym="yfeU"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682424.1"
                     /note="catalyzes the cleavage of the lactyl ether moiety
                     of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form
                     N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate;
                     involved in MurNAc dissimilation pathway; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="N-acetylmuramic acid 6-phosphate etherase"
                     /protein_id="HET9013208.1"
                     /translation="KLLRDTCDVTILVLVGPEVVTGSTRMKAGTATKLVLNTLTTAAM
                     IRLGKTYGNLMVDLRAWNDKLIDRSERIVMETTGLPRPEARGVIDAADGKVKTAIVMA
                     RRRVSRDEAERLLEQHEGRLRAIVGDPPPVRGA"
BASE COUNT          432 a         1086 c         1117 g          403 t
ORIGIN      
        1 accgcctgat gggcttgcag gcccaggccc tgggcatgcc ggtgagaccg atgggcgcgg
       61 ggtgttggtg actcacgtga cccgcatctt cccccgcagc caccgcgcca ccgcctcctg
      121 gagcagacgc tggcggtgcc aggcgaggag taccggagca tcgctgggga gctggtccac
      181 cattctcggg tgaccgaaca gcaccacgag atcggcgtct gcggcctggg tcgccagcgc
      241 ctcgagggac gcagcgccga gtcccgccct gcccttccat ccccgtggct ccgcgaacac
      301 cagtgccacc ctgctgccgc cggtgtaccg tcccaccagc tcggggccga gggctcgggc
      361 gacccagtcg ctcgggctcg gcgggtaggg accacccacg tcgtcgtcta cgatcacgag
      421 atccagcgga ccagtgagcg cgggggcgtc gccgcgcacc atgccctgac cgaccagcgc
      481 atcggcgagc gcgctcgcgg agtcgaaggg gccgcgacgg accggtggcg tagggcgggt
      541 cgcgaccgcg agcgcgcggt cgtagcggcg gagcgactgc tcgacccgct cgtgtgatag
      601 agtgccgccc tcgagcgcgc cggtgatggc ctcgcgcatg cgtcgcgggt ccttggggta
      661 gagcagcaga tccaccccgg actggagcgc ctggaccgcg gcgtcggact cacgtcgtcc
      721 ggtcagcgcg ccatccatga tcagcgcgtc ggtgaccacg agaccatcga accggagacc
      781 gcggcgcagg ccatccatga tcggagccga gagcgtggcc gcggtgccgg tggcatcgaa
      841 tgcgggaaac gccacgtggg cggtcatcat cgccgcaacc ccgctctcga ccgcgacggc
      901 gaacgggacc atatcgctcc gctgcagcgt ctcgcggtcg gcctccacgg caggcagggt
      961 gacgtggctg tcgagcgtgg tgcgcccgtg ccctggatag tgcttcgcgc aggccagggc
     1021 gcccgcgccc tggcagccct cgatccagct gcggaccagc gtcgccacgc gctgcggatc
     1081 gtcgccgaag gcgcgggtct ggacgatggg attctcggga agcacatcga ggtcggcgac
     1141 cggcgcgaac acccagttga tccctaccgc gcgcgcctcc tgcgccgtga ccgctccggc
     1201 ccagcgggcc accgcggcat cgtgcagcgc ggcgagcgcc agcggcggcg ggaactcggt
     1261 gagtccctcg acctgctgcc ccgcgccgcg ctcgaggtcc gatccgagga gcagcggacg
     1321 ctcggcgcgc cgggtcaggt cggtggtgag ccggcggacg gtctccgcgt tcccgccgaa
     1381 gatgatgaag ccgcccacgc cgagctccag tgcgtcggcg atcgcggcgg cctcgtggct
     1441 gaagccgccg ttcgccccgg cgcgcagcgc cgggaggatg agccggccgg gctgaagatc
     1501 gccggacatc aggcgggggt caccgacccg agcaccctgg agccggacgc gccggtcgcg
     1561 gagggcacgt tgcccggctg cccgtgcagc gtgagatagc cgagcagcgc gaaggcgacc
     1621 gcttccttcg cgtcaccggg gaagaacagc tcgtcgaagc gtcgcaacgg atgtttcccc
     1681 gagagcaagt cgaggcggcg gcccagcgcc gccatgagcc cggggtggtg acagccgccg
     1741 ccgctcgcca cgacttcggc gtcgcccggc acccagctgc ccacggcatc ggcgacggtc
     1801 cgggcggtga gctcgaccgc cgtcgccact ccgtcggcac ccggcacacg ggcatggagg
     1861 tcgcgggcgt aggcgtcccc gaaccgctcg cggccggtgc tcttgggcgg aggcgcggcg
     1921 aagaagggat cgcccagcag ctcggcgagc acggcgtcgt ccggcttgcc cttcgcggcg
     1981 atgagcccgt cgcggtcgta ggaacggcgg ccgtccacca ggccggcgac gcgatcgatg
     2041 atcgccacgc ccggtccggt atcgaaggcg aacaccccct cctcctgcgc gcgccgcggg
     2101 acgtaggtga tgttcgccat cccgcccagg ttgagcagca ctcggggatg atcaaccgcg
     2161 gcgaagagca gcacgtcggc catcggcacc agcggggccc cctgccctcc cgcggcgacg
     2221 tcgcgcgggc ggaagttgct caccacccgc acgccgaacc gctctgccag aatcgccggc
     2281 tcgccgagct gccaggtgac ggtcggcggc tcgtgccaga ccgtctggcc gggaaatgcg
     2341 atgaagccga gctcgctcgc gggagtgcgg gtctgggcga gcaggatctg gatggcatcg
     2401 gccgcccagt cggcgatgcg cacgtgcagc cgggcgaagg acgcggcgtc ggcctgggcg
     2461 ccgggagaga gggccgagag aagctcggcg cgctccgcgt cgtcgtaggg gcgggtgacg
     2521 aagtcgagca gcgtcgcgtg cgtggggctc tcgatgcgga ccagcgcggc gtccacgccg
     2581 tccagcgagg tgcccgacat gaggccgatg cccaccatgg ggcgctcgct cacgcgccgc
     2641 gcaccggcgg cgggtcgccc acgatggccc gcaggcgtcc ttcgtgctgc tccagcagcc
     2701 gttcggcctc gtcgcgcgag accctgcggc gcgccatcac gatcgcggtc ttcaccttgc
     2761 cgtcggccgc gtcgatgacg ccgcgcgctt ccggccgggg aaggcccgtg gtctccatca
     2821 cgatgcgctc gctgcggtcg atcagcttgt cgttccaggc gcgaaggtcc accatcaggt
     2881 tgccgtaggt cttgcccagc cggatcatcg ccgcagtggt gagggtgttc agcaccagct
     2941 tggtggcagt gcccgccttc atccgggtcg agccggtgac gacctcgggc cccacgagca
     3001 ccaggatggt gacgtcgcag gtgtcgcgca ggagcttg
//
LOCUS       DASSYW010000975         3655 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1078527, whole genome shotgun sequence.
ACCESSION   DASSYW010000975 DASSYW010000000
VERSION     DASSYW010000975.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3655)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3655)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3655
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1078527"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2709
                     /locus_tag="VFN38_15390"
     CDS             <1..2709
                     /locus_tag="VFN38_15390"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: protein motif:HMM:NF004349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0004832 - valine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006438 - valyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HET9013209.1"
                     /translation="ALYADWTRAGVFTARPERTTRQGGDADAFTIMMPPPNVTAVLHV
                     GHGLNATVQDVLVRWARMKGRETLWLPGTDHAGIATQNIIERQLADEGLTRQDLGRTK
                     FLERTAEFVERTGGTILRQLRAMGASADWSRTAYTFSPELSGAVREAFVRLYERGLIY
                     RGHRVIHWCPRCLTSLSDEEAEPQDTNGTLYHVSYPVQGDAERSITVATTRPETMLGD
                     VAVAVNPDDERYQSLIGENVLLPILDLPIPVIADAYADPAFGTGVVKITPAHDANDFE
                     VGRRNGLAMPVVIDQFGKMGEGPDAAGRVPEALRGVDRFAARKRIVAQLEEAGRLVKK
                     ESHTHNVRHCYRCDTVVEPRLSDQWFVRMQPLAEPALAGVRSGRVRILPERHVAVYEH
                     WLTNIRDWNISRQLWWGHRIPVWYCQNDSAHVMASRDDPDACPHCGGTVVQDEDVLDT
                     WFSSWLWPMSTLGWPNEESTDLRAFYPSDVLVTAPEILFFWVARMIMAGYAFLGDAPF
                     HSVYLHGTARDTKGRKMSKSLGNGIDPVDVIALYGADALRFTLVSGMGLGADVFLDPA
                     DLEKTFAPGRNFATKLWNIGRFLLTNVGAGEVRPIAEIAPAQLGRPDAWILERLDVAI
                     RECDRAIGPLAPLRGVWLDEERTAGLRLNDYAETARRFVWNELADWYLEAIKTRLITP
                     GDDQQVARSVLVHVFDQALRLLHPIVPFITEALWQRLPGHVDGTWLAATPWPVARPAG
                     EVSVLAGQFELLRSVVAALRTIRSEYNVPPAKPISAYVIATDDRRQMLDEEFSLINRL
                     CKTGLAFVEWAPAGQGASVILPGGTELIVPLEGVIDVGKECARLRTELANLEKQLGAL
                     ELRLRNPAFAERAPSHVIDAERAKLAEWTTRRDQLATRVEGLCGAG"
     gene            2694..>3655
                     /locus_tag="VFN38_15395"
     CDS             2694..>3655
                     /locus_tag="VFN38_15395"
                     /inference="COORDINATES: protein motif:HMM:NF024603.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HET9013210.1"
                     /translation="MRRGLIAPALLAGAIACASASPPPGGPEDLAPPRLLAVTPDSNA
                     VNFRERNVTFQFDETINDRGSGAQELDNYFLVSPSDGNPRVSWHRSRIDVRPRNGFRE
                     NTAYSVTLLPGVADLRGNVLRVGAKVVFSTGPTIPAGRITGTVFDWVGERPAPRALVQ
                     AITPDSVRYLAQSDSAGRFAVGPLPPGSYLVRAIIDANNNRGLDRSEAFDTARVTVPQ
                     AGALELRTVQRDTLPPRIVSVTPSDSLSLRVTFDRYLDPDQPPPATAFRLVAADSTVI
                     PVLAMLTPRAEQAETQARQQAVADSVRRVDSLAGKPLAPRPVPAA"
BASE COUNT          514 a         1358 c         1290 g          493 t
ORIGIN      
        1 gcactgtatg cggactggac gcgcgcggga gtgttcaccg cgcgccccga gcggacgacg
       61 cggcaggggg gcgacgcgga cgcgttcacg atcatgatgc cgccgccgaa cgtgacggcg
      121 gtgttgcacg tcggccacgg attgaacgcc acggtgcagg acgtcctcgt gcggtgggcc
      181 cgcatgaagg ggcgcgagac gctctggctc cccggcaccg accacgccgg catcgcgacg
      241 cagaacatca tcgagcgcca gctcgccgac gaggggctca cccggcagga cctgggacgc
      301 acgaagttcc tcgagcgcac cgcggagttc gtggagcgca cggggggaac gatcctccgg
      361 cagctccgcg ccatgggcgc ctccgccgac tggtcgcgca ccgcctacac cttcagcccc
      421 gagctgagcg gcgccgtgcg cgaggcgttc gtgcgcctgt acgagcgcgg cctcatctac
      481 cgcggccacc gcgtcatcca ctggtgcccg cgctgcctca cctcgctgtc cgacgaggag
      541 gccgagccgc aggacaccaa cggcacgctc taccacgtgt cgtatccggt gcagggcgac
      601 gccgagcgct ccatcaccgt ggccacgacg cgccccgaga cgatgctcgg cgacgtggcc
      661 gtggcggtga accccgacga cgagcgctac cagtcgctga tcggcgagaa cgtgctgctg
      721 ccgatcctcg acctgcccat cccggtgatc gccgacgcgt acgccgatcc cgccttcggc
      781 accggcgtcg tgaagatcac gccggcgcac gacgcgaacg acttcgaggt gggacgccgc
      841 aacggcctgg cgatgccggt ggtgatcgac cagttcggga agatgggcga gggccccgac
      901 gcggcgggcc gcgtgcccga ggcgctgcgc ggcgtggacc ggttcgcggc gcgcaagcgc
      961 atcgtcgccc agctcgagga ggcgggacgg ctcgtcaaga aggagagcca cacccacaac
     1021 gtccgccact gctaccgctg cgacacggtg gtggagccgc ggctcagcga ccagtggttc
     1081 gtgcgcatgc agccgctcgc cgagccggcg ctggccggcg tgcgctcggg ccgcgtgcgc
     1141 atcctccccg agcggcacgt cgcggtgtac gagcactggc tcacgaacat ccgcgactgg
     1201 aacatctcgc ggcagctctg gtggggccac cgcatcccgg tgtggtactg ccagaacgac
     1261 tccgcgcacg tgatggcgag ccgcgacgac cccgacgcct gtccgcactg cggcggcacg
     1321 gtggtgcagg acgaggacgt gctcgacacc tggttctcga gctggctctg gccgatgtcc
     1381 accctcggct ggccgaacga ggagtccacc gacctgcgcg ccttctaccc gagcgacgtg
     1441 ctcgtgacgg cgccggagat cctgttcttc tgggtcgcgc gcatgatcat ggccggctac
     1501 gccttcctcg gcgacgcgcc gttccactcg gtgtacctgc acggcacggc ccgcgacacg
     1561 aaggggcgca agatgtcgaa gtcgctcggc aacggcatcg acccggtgga cgtcatcgcg
     1621 ctgtacggcg ccgacgcgct gcgcttcacg ctcgtgtcgg ggatggggct cggcgccgac
     1681 gtcttcctcg atcccgccga cctggagaag accttcgcgc cgggccgcaa cttcgcgacg
     1741 aagctctgga acatcggccg cttcctgctc acgaacgtgg gcgcgggcga ggtccgcccg
     1801 atcgccgaga tcgcgccggc gcagctcggc cggcccgacg cgtggatcct cgagcggctc
     1861 gacgtcgcca tccgcgagtg cgaccgcgcc atcgggcccc tcgcgcccct gcgcggcgtc
     1921 tggctggacg aggagcgcac ggcgggcctc cgcctcaacg actacgccga gacggcccgc
     1981 cgcttcgtgt ggaacgagct ggcggactgg tatctcgagg ccatcaagac gcgcctcatc
     2041 accccgggcg acgaccagca ggtcgcgcgg tcggtgctcg tgcacgtgtt cgaccaggcg
     2101 ctccggctgc tgcacccgat cgtgccgttc atcaccgagg cgctctggca gcgcctgccg
     2161 ggccacgtgg acggcacctg gctggccgcc accccgtggc cggtggcgcg ccccgccggc
     2221 gaggtgagcg tgctggcggg ccagttcgag ctgctgcgca gcgtcgtcgc cgcgctgcgg
     2281 accatccgct ccgagtacaa cgtgccgccg gcaaagccga tcagcgcgta cgtcatcgcc
     2341 accgacgacc ggcggcagat gctcgacgag gagttctcgc tcatcaaccg gctgtgcaag
     2401 acggggctcg ccttcgtcga gtgggcgccc gccgggcagg gggccagcgt catcctgccc
     2461 ggcgggacgg agctgatcgt ccccctggag ggggtgatcg acgtggggaa ggagtgcgcg
     2521 cggctccgga ccgagctcgc caacctggag aagcagctcg gcgcgctcga gctgcggctg
     2581 cgcaatccgg cgttcgccga gcgcgcgccc tcgcacgtga tcgacgcgga gcgcgcgaag
     2641 ctcgccgagt ggaccacgcg ccgcgaccag ctcgcgacac gcgtcgaggg gctgtgcggc
     2701 gcgggctgat cgcgccggcg ctgctggccg gcgcgatcgc ctgtgcctcg gcctcgccgc
     2761 cgcccggcgg gccggaagac ctcgcgccgc cgcggctcct ggcggtgacg cccgactcca
     2821 acgcggtgaa cttccgcgag cgcaacgtca ccttccagtt cgacgagacg atcaacgacc
     2881 gcggcagcgg ggcgcaggag ctcgacaact acttcctcgt ctcgccgtcc gacggcaatc
     2941 cgcgcgtgag ctggcatcgc agccgcatcg acgtccgccc gcgcaacggc ttccgcgaga
     3001 acaccgcgta ctcggtgacg ctgctgcccg gcgtcgccga cctgcgtggc aacgtcctgc
     3061 gcgtgggggc gaaggtggtc ttctccaccg ggccgacgat cccggccggc cgcatcaccg
     3121 gcaccgtgtt cgactgggtg ggggagcggc cggcgccgcg cgccctcgtc caggcgatca
     3181 cgccggacag cgtgcgctac ctcgcccagt ccgacagcgc cggccggttc gccgtggggc
     3241 cgctcccccc cggcagctac ctcgtgcgcg cgatcatcga cgcgaacaac aatcgggggc
     3301 tcgaccgttc cgaggcgttc gacacggcgc gcgttaccgt gccgcaggcg ggcgcgctgg
     3361 agctgcgcac cgtgcagcgc gacacgctgc ccccgcgcat cgtgtccgtc acaccgtcgg
     3421 attcgctgtc gctccgcgtc accttcgacc gctacctcga tcccgaccag ccgccccccg
     3481 ccaccgcgtt ccggctggtg gcggcggaca gcacggtgat cccggtgctg gcgatgctca
     3541 ccccgcgcgc cgagcaggcg gagacgcagg cgcggcagca ggcggtcgcc gactcggtgc
     3601 gccgcgtgga ttcgctggcc ggcaagccgc tggcgccgcg acccgttcct gcggc
//
LOCUS       DASSYW010000976         5721 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_613855, whole genome shotgun sequence.
ACCESSION   DASSYW010000976 DASSYW010000000
VERSION     DASSYW010000976.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 5721)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5721)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5721
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_613855"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..356
                     /locus_tag="VFN38_15400"
     CDS             <1..356
                     /locus_tag="VFN38_15400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013211.1"
                     /translation="TMLATLKRIVGDTAVHFTTLLAPKTPFESPVNTDLFRAVERAAK
                     ERDPNVFVTSSMMTGATDRPSYRKLGIIAYGLDPFRVEAADEQRGVHGNDERLSVENV
                     GFGIRYLYDILRYAQ"
     gene            complement(481..2808)
                     /locus_tag="VFN38_15405"
     CDS             complement(481..2808)
                     /locus_tag="VFN38_15405"
                     /inference="COORDINATES: protein motif:HMM:NF012471.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004181 - metallocarboxypeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M14 family zinc carboxypeptidase"
                     /protein_id="HET9013212.1"
                     /translation="MRFTSLAVAAGLLLPSVARAQSRAVPTPASVIGFEPGMDRKLPE
                     WRQVVAYFQALDASSPRIEVHTLGKTTLGRPFIAAFIGEPATLANLAQVRDAARRLAD
                     PRLTTPAERAALERDGKVVVLVTSSIHSTEVGGILTPLVLAHRLVTGEDEESRAIRRN
                     TLTILVPSLNPDGVDIVGDWYRSSLGTAWEGSGPPTLYHYYTGHDNNRDWYAFTQAET
                     RLVIDSLYSPYHPQIVNDIHQQGSSGSRIFIPPYMDPVEPNIDPILMAGVAQMGKSMT
                     WRMTAQGFTGIANNTSYDAWTPARAYQHYHGAIRILTETASAQLASPVRISYDSLRAG
                     YNVDPKVTGVDFLTKWNGGAWGIGDIVKYQTAASWALMAQAADDRALWLSSYSRVQQN
                     AVAGKRAPGRGDWPTSIVIPAQPARDTAVNAALRILQRGQVEIRQATSAFTANGRSFP
                     AGSYVIHTAQPYGAFAKSLLEPQHYPNLREYPGGPPKRPYDVTAHTLPLLYGFDVAMI
                     PDSVTASTTALPPVPATRWVAAGLSDARTRRIAIFRNASPSMDEGWTRWVFDQYRIPF
                     TLVTAREIRAGNLASRFDAIVIPDQNARAIARGPTGNAPDSLKGGLGESGAAALGAFV
                     DAGGTVLAFNDASDYAIEALQLPVKNVLAGVRNTDFYAPGSLITVDYDRANPLAAGLT
                     APASVVWFEDSPTFELTDPARGSVVARYPTAGDPLASGWLLGAPRLAGKAALVDVTRG
                     KGHVVLFGFRPQYRGQSMATFPIIWNALRMKTPVM"
     gene            complement(2878..4035)
                     /locus_tag="VFN38_15410"
     CDS             complement(2878..4035)
                     /locus_tag="VFN38_15410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P1 family peptidase"
                     /protein_id="HET9013213.1"
                     /translation="MRPFLTCVALCATMPTVSTAQRARARDIGVKPGIFVPGPLNAIT
                     DVAGVRVGHATVVAGDTVHTGVTAILPHDGNQFFDRVPAAVHVGNAFGKLVGSTQVKE
                     LGELETPILLTCTLCVWRVADALVDEMIAQPGMERIGSINPVVGETNDGGLNAIRSRP
                     VGRDAVHAALANAAGGPVAEGSVGAGAGTVAFEWKGGIGTSSRLLPASLGGWTVGVLV
                     QSNFGGVLQVLGAPVGRELGKYAFRNDVERERGDGSIMIVVATDAPLSDRNLERLAAR
                     AIMGLARTGSSASNGSGDFVIAFSTAKEVRRVLSPGGAAPGGARALRATAEVKNDDMS
                     GLFEGVVEATEEAIYNSLFMATSVTSRGRTVEAIPLDRVRAILVKYGVAGR"
     gene            4418..5461
                     /gene="aroF"
                     /locus_tag="VFN38_15415"
     CDS             4418..5461
                     /gene="aroF"
                     /locus_tag="VFN38_15415"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003849 - 3-deoxy-7-phosphoheptulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase"
                     /protein_id="HET9013214.1"
                     /translation="MIIITRPDISDDELDHIRERVESAGLHTHLSRGEHRTIIGCIGD
                     EARLQELPLRSLPGVESVLPVLKPYKRASREFSVDRTVVRVGAHATIGGDAIAVIAGP
                     CSVENRDMLHETALAVRDAGATILRGGAFKPRSSPYSFQGLGREALRLLVEVRAATGL
                     PVVTEVLDTRDVELVAEHADMLQVGARNMQNFALLAELGRAKRPILLKRGMSATIAEL
                     LMAAEYIMANGNDAIVLCERGIRTFERATRNTLDVSAIPVLKRETHLPVIVDPSHAGG
                     DAALVAPLAFAGIAAGADGLIIEVHPDPESALSDGDQSLAPPAFVSLMDRLSAFAVAA
                     GRAPLAAPAGVPA"
     gene            5458..>5721
                     /locus_tag="VFN38_15420"
     CDS             5458..>5721
                     /locus_tag="VFN38_15420"
                     /inference="COORDINATES: protein motif:HMM:NF013939.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
                     /protein_id="HET9013215.1"
                     /translation="MTTSHESAPDPRDELRDCRNAIEVVDRRIVALLAQRVTLGLRAA
                     AAKRDAGLPVKDKAREAAVIERAVAEAQAHRLPAKAVKKIFEQI"
BASE COUNT          882 a         2012 c         1936 g          891 t
ORIGIN      
        1 acacgatgct cgcgacgctg aagcgcatcg tgggcgacac ggcggtgcat ttcacgaccc
       61 tgctcgcgcc caagacgccg ttcgagagtc ccgtgaacac cgacctgttc cgcgccgtcg
      121 agcgcgcggc gaaggagcgc gacccgaacg tgttcgtcac gagctcgatg atgaccggcg
      181 cgacggaccg gcccagctac cggaagctcg gcatcatcgc gtacggcctc gatcccttcc
      241 gcgtggaagc ggccgacgag cagcggggcg tgcacggcaa cgacgagcgg ctgtcggtgg
      301 agaacgtcgg gttcggcatt cgctacctgt acgacatcct gcgctacgcg cagtaggcga
      361 gctctcgcca actgccttga ggaacacgga tttctcagat tgcgcagatt cccttcttca
      421 ctctgcgtca atctgcggaa tctgtgttcc ccaaaagcgt tcctgcggaa tgatgatcgg
      481 ctacatgacc ggcgtcttca tgcgcagcgc gttccagatg atcgggaaag tcgccatgct
      541 ctggccccgg tactgcgggc ggaagccgaa cagcacgaca tgccccttgc cgcgcgtcac
      601 gtccacgagc gccgccttgc cggcgagccg cggcgcgccg agcagccagc cgctcgccag
      661 cggatcgccc gccgtcgggt agcgcgccac gaccgagccc cgtgccggat cggtgagctc
      721 gaacgtgggc gagtcctcga accacacgac cgaggccggc gcggtgaggc cggccgccag
      781 cgggttcgca cggtcgtagt cgaccgtgat cagtgatccg ggtgcgtaga aatccgtgtt
      841 gcgcacaccg gcgagcacgt tcttcaccgg cagctgcagc gcctcgatcg cgtagtcgct
      901 cgcgtcgttg aaggcgagca ccgtccctcc cgcatccacg aacgcgccga gcgccgcggc
      961 gccggactcg ccgagcccgc ccttgagcga gtcgggggca ttgcccgtcg gcccgcgcgc
     1021 gatcgcccgc gcattctggt cgggaatgac gatcgcgtcg aacctggacg cgaggttgcc
     1081 ggcgcggatc tcgcgcgccg tcacgagcgt gaacgggatg cggtactgat cgaacaccca
     1141 gcgcgtccac ccttcgtcca tcgatggcga cgcgttcctg aagatcgcga tgcggcgcgt
     1201 ccgggcgtcg ctcaggccgg ccgcgaccca gcgggtggcg ggcacgggcg gcagtgccgt
     1261 cgtcgaggcg gtcaccgaat cggggatcat cgccacgtcg aagccgtaca gcagcggcag
     1321 cgtgtgcgcg gtcacgtcgt acgggcgctt gggcgggccc cccggatact cgcgcaggtt
     1381 gggatagtgc tgcggctcga gcagcgactt ggcgaacgcg ccgtacggct gcgcggtgtg
     1441 gatcacgtag ctgccggcgg ggaagctccg accgttcgcc gtgaaggcgc tcgtcgcctg
     1501 gcggatctcc acctgcccac gctgcaggat tcgcagcgcg gcgttcaccg cggtgtccct
     1561 cgcgggctgc gccgggatca cgatcgacgt cggccaatcg cctcggcccg gcgcgcgctt
     1621 gccggcgacg gcattctgct ggacgcggga atagctcgac agccagagtg cgcggtcgtc
     1681 ggcggcctgc gccatcagcg cccatgacgc cgccgtctgg tacttcacga tgtcgccgat
     1741 cccccacgcg ccgccgttcc acttcgtgag gaagtcgacg cccgtcacct tgggatcgac
     1801 gttgtagccg gcgcgcagcg agtcgtatga gatgcgcacc ggggacgcga gctgtgcgct
     1861 cgccgtctcg gtgaggatgc ggatggcgcc gtgatagtgc tgataggcgc gcgccggcgt
     1921 ccaggcgtcg tacgacgtgt tgttggcgat gccggtgaag ccctgcgccg tcatgcgcca
     1981 ggtcatcgac ttccccatct gcgccacgcc ggccatcagg atcggatcga tgttgggctc
     2041 cacgggatcc atgtacggcg ggatgaagat ccgcgacccg ctcgagccct gctggtggat
     2101 gtcgttgacg atctgcgggt gatagggcga gtacagcgaa tcgatcacca gccgcgtctc
     2161 ggcctgtgtg aacgcgtacc agtcgcgatt gttgtcgtgg cccgtgtagt agtggtagag
     2221 cgtcggcggg ccgctcccct cccacgccgt gccgagcgag ctgcgatacc agtcgcccac
     2281 gatgtcgacg ccgtccggat tcagcgacgg cacgaggatc gtcagcgtgt tgcggcggat
     2341 ggcgcgcgac tcttcgtcct cgcccgtcac caggcgatgc gccagcacga gcggcgtgag
     2401 gattccgccc acctccgtgg agtggatgct cgaggtcacg agcacgacca ccttgccgtc
     2461 gcgctcgagg gccgcacgct ccgccggcgt cgtgagccgc ggatcggcga gccgccgcgc
     2521 ggcatcgcgc acctgcgcga ggttcgccag cgtggccggc tcgccgatga aggcggcgat
     2581 gaagggccgg ccgagcgtcg tcttgcccag cgtgtgtacc tcgatccgcg gcgacgacgc
     2641 atcgagcgcc tggaaatagg ccacgacctg gcgccattcg ggcagcttgc ggtccatgcc
     2701 cggctcgaag ccgatcaccg aggcgggggt aggcacggcg cggctctggg cgcgcgccac
     2761 ggacgggagc agcaggccgg cggcgacggc gagcgaagtg aagcgcatca gggcgggatg
     2821 tccggtcgaa ggtgtggctg agctacgggc cgggaccgcg gggcgttgag agcgacatca
     2881 gcggccggcg actccgtact tgaccaggat cgcccgcacc cggtcgaggg ggatcgcctc
     2941 caccgtccgt ccgcgcgagg taaccgacgt cgccatgaag agcgagttgt agatcgcctc
     3001 ttcggtcgcc tccaccacgc cctcgaacag gccggacatg tcgtcgttct tcacctcggc
     3061 cgtcgcgcgc agggcgcgtg caccgccagg tgcggcgccg ccaggcgaga gcacgcggcg
     3121 cacctccttc gccgtcgaga aggcgatcac gaagtcgccc gatccgttcg acgcgctgga
     3181 accggtgcgc gcgagtccca tgatcgcgcg cgccgcgagg cgctcgaggt tgcgatccga
     3241 caggggagcg tcggtggcga cgacgatcat gatggagccg tcgccgcgct cgcgctcgac
     3301 gtcgttcctg aatgcgtact tgcccagctc gcgtcccacc ggagctccca gcacctggag
     3361 cacgccaccg aagttggatt gcacgagcac acccaccgtc cacccgccga gcgacgccgg
     3421 cagcaggcgc gacgacgtgc cgatgccgcc cttccattcg aaggccacgg tgcccgcacc
     3481 ggcgccgaca cttccctccg ccaccggtcc tcccgcggcg ttcgcgagcg cggcgtgcac
     3541 cgcatctcgc ccgaccggcc ggctgcggat cgcgttcaat cctccgtcgt tggtctcgcc
     3601 gaccacggga ttgatcgagc cgatgcgctc catccccggt tgcgcgatca tctcgtccac
     3661 cagcgcgtcg gccacgcgcc acacgcacag cgtgcaggtg agcaggatcg gcgtctccag
     3721 ctcgccgagc tccttcacct gggtcgagcc cacgagcttg ccgaatgcat tgccgacgtg
     3781 cactgcggcc ggcacgcgat cgaagaactg gttgccgtcg tgcggcagga tcgccgtcac
     3841 gccggtgtgt acggtgtcac ccgcgacgac ggtcgcgtga cccacgcgta cgccggcgac
     3901 gtcggtgatg gcgttcaacg ggccggggac gaagataccc ggcttcacgc cgatgtcgcg
     3961 ggcacgagcg cgctgcgccg tggaaacggt cggcatcgtc gcgcacaggg ccacgcaggt
     4021 caggaatggt cgcatgcgat cacatgggtg cagggcgagt ctcatcccgc gaaaccttcc
     4081 tgatggaaca cagatttcgc agatgccgca gatgtcgcag atgccgcatc tgtgcaatct
     4141 gcgcaagtct gcgaaatctg cgttcctcaa ggcagtccat cccattcccg ggatttcatc
     4201 cttgacgggg caccggctac gcccctatcg tgagaccatg gccagcccgc gcaacttccg
     4261 ctacgccttc tattactacg gcttcccgat cacgggccgt ggctggagac gtacgcgcga
     4321 ctgaggcacg ctggctcacc gcaacgatcc ccgacggccc gtggaaatct ccacgggtct
     4381 tttttgtttc tccgccattc tcctttcccg cggtccaatg atcatcatca cgcgccccga
     4441 catcagcgac gacgagctcg atcacatccg cgagcgcgtg gagtcggccg gcctccacac
     4501 ccacctctcg cgcggtgagc atcgcacgat catcggctgc atcggcgacg aagcgcgctt
     4561 gcaggagctg cccctgcgct cgctgcccgg cgtggagtcc gtgctgcccg tgctcaagcc
     4621 ctacaagcgc gcgtcgcgcg agttcagcgt ggaccgcacg gtcgtccgcg tcggcgcaca
     4681 cgccacgatc ggcggcgacg ccattgccgt catcgccggc ccgtgttcgg tggagaaccg
     4741 cgacatgctg cacgagactg ccctcgcggt gcgcgatgcg ggagcgacga tcctccgcgg
     4801 cggcgcgttc aagccccgct cgtcgcccta cagctttcag ggactcggac gcgaggcgtt
     4861 gcgactcctc gtcgaggtgc gcgccgccac gggacttccc gtcgtcaccg aggtgctgga
     4921 cacccgcgac gtggagctgg tggccgaaca tgccgacatg ctccaggtcg gcgcgcgcaa
     4981 catgcagaac ttcgccctcc tggccgagct cggacgggcg aagcgcccca tcctgctcaa
     5041 gcgcggcatg tcggccacga tcgccgagct cctgatggcg gccgagtaca tcatggcgaa
     5101 cgggaacgac gccatcgtcc tctgtgagcg cggcatccgc accttcgaac gcgccacgcg
     5161 caacacgctg gacgtctcgg ccatcccggt gctcaagcgc gagacgcacc tgccggtcat
     5221 cgtggatccg agccatgccg gcggcgacgc ggcgctcgtg gcgccgctcg ccttcgccgg
     5281 catcgccgcg ggggccgacg gattgatcat cgaggtgcat cccgatccgg agagcgcgct
     5341 ctccgacggt gaccagtcgc tcgcgccgcc tgcgttcgtc tcgctcatgg atcgactctc
     5401 cgccttcgcc gtcgccgccg gacgggcgcc gctggcggct cccgcggggg taccggcatg
     5461 acgacgtcgc acgagtccgc gcccgatccg cgcgatgagc tgagggactg ccgcaacgcg
     5521 atcgaggtgg tggaccgccg catcgtcgcc ctgctggcgc agcgcgtgac gctcggcctc
     5581 cgcgccgccg ccgccaagcg cgacgccggg ttgccggtga aggacaaggc gcgcgaggcc
     5641 gcggtgatcg agcgcgccgt ggcggaagca caggcccacc gcctgcccgc caaggcggtg
     5701 aaaaagatct tcgagcagat c
//
LOCUS       DASSYW010000977         2659 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1344398, whole genome shotgun sequence.
ACCESSION   DASSYW010000977 DASSYW010000000
VERSION     DASSYW010000977.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2659)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2659)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2659
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1344398"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..537)
                     /locus_tag="VFN38_15425"
     CDS             complement(<1..537)
                     /locus_tag="VFN38_15425"
                     /inference="COORDINATES: protein motif:HMM:NF020337.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CotH kinase family protein"
                     /protein_id="HET9013216.1"
                     /translation="MTPRLSVAAAVALLGLLAAPPAHAQSQDEFFDDSTLRDLRLTIS
                     QRDWDTLRARADEDTYYTADLRWNGVTVRNIGVRSRGTGTRNGIKPGLRLDVNRYLAD
                     QEFLGLKALVLDNAWTDPSTMREALSMKLFARAGLESPREAHVRLFVNDAYAGLYVAI
                     EPIDRTFITRVFGAAEGHV"
     gene            complement(549..1784)
                     /locus_tag="VFN38_15430"
     CDS             complement(549..1784)
                     /locus_tag="VFN38_15430"
                     /inference="COORDINATES: protein motif:HMM:NF019042.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HET9013217.1"
                     /translation="MRADGPAAAGCLCALLLATSAASGSAQTVTFDRRPTVHVPGGEL
                     ELRARVDGVVLSGSKRQGLDGPDAEWQTRRIEVDGTFFQKLEFELAYELGDSVEPEGH
                     QYVNYRFSRRLEIRAGRFKIPFSRDQLTSGGDLDFVVRSMAARQIAPGRDVGVMVHGR
                     TRNRAFSYQAGYFDRDGTHARTSQTEGGHDAIAARVVIAPFVSTSHRVAAPLQLGVNV
                     VTSRLDNLLGLRGETVFEDGVFFDRSYVNGRRLRHGLDAAWSLGPVSLTAERDVMTDE
                     RLAMGLAGEDLPKIRATGWYVAGTWTVTGETKDGRVEPRESLFDGGWGAVQLAGRVER
                     LAFGTLDEAANAMLRFGAAPPDNHDRVTTVGVAWYLNRYFKVQGNLVHEAIADPARSP
                     APNAGGRLPRGVLQFQFVL"
     gene            complement(1781..>2659)
                     /locus_tag="VFN38_15435"
     CDS             complement(1781..>2659)
                     /locus_tag="VFN38_15435"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HET9013218.1"
                     /translation="KMTDTVSKTSVALERIGDLLRTRSQVDERPDAVQAPRFRGALEL
                     RDVHFRYAPDQQPVLRGINLVVEPGARIAIVGPTGAGKSTLLSLLLRLYDPVDGSVRI
                     DGRDVRHFTLTSLRDQISLVPQEPVLFHGPVWQNIAYGRPGATREEIIEAAVLANADE
                     FIVRMLHGYDTVIGERGETLSGGQRQRIAIARAVIRQAPILLLDEPSAALDPESEALV
                     FDALTRLMRGCTSITIAHRMATVRRAQQIYLLDDGHITAFGTHEQLLADSEAYALRYR
                     LEFPDADAELAGSPAS"
BASE COUNT          405 a          913 c          936 g          405 t
ORIGIN      
        1 gacgtggcct tcagcggcgc cgaacacccg cgtgatgaag gtgcgatcga tcggctcgat
       61 ggccacgtac aaccctgcat aggcgtcgtt gacgaacagc cgcacgtggg cttcccgcgg
      121 cgactcgagg ccggcgcgcg cgaagagctt catcgacagg gcctcgcgca tcgtcgaggg
      181 gtccgtccag gcgttgtcga ggacgagcgc tttcaggccg aggaactcct ggtcggcgag
      241 atagcggttg acgtccaggc gcagcccggg cttgatgccg ttgcgggtgc ccgttccgcg
      301 cgagcggacg ccgatgttgc gcaccgtgac gccgttccag cggagatcgg ccgtgtaata
      361 ggtgtcttcg tcggcgcggg cccgcagggt gtcccagtcc cgctgactga tggtcagccg
      421 caggtcgcgc agcgtcgagt cgtcgaagaa ctcgtcctgc gactgcgcgt gcgccggcgg
      481 cgccgcgagc agcccgagca gcgcaacagc cgccgcgacg gagagacggg gtgtcatctt
      541 ggtgggagtc acaggacgaa ctggaactgc aggacaccgc gcggcagccg gccgccagcg
      601 ttcggcgccg ggctgcgcgc cggatccgcg atcgcttcgt ggacgagatt gccctgcact
      661 ttgaagtagc ggttgagata ccacgcgacc cctacggtgg tgacccgatc gtggttgtcg
      721 ggcggagcgg cgccgaaacg cagcatcgcg ttcgcggcct cgtcgagggt gccgaaggcg
      781 agacgctcga cccggccggc gagctgcacg gcgccccaac cgccgtcgaa caggctctcc
      841 cgcggttcga cgcgaccgtc cttggtctcg ccggtcacgg tccacgtccc agcgacgtac
      901 cacccggtgg cgcggatctt cggcaggtcc tcgcccgcca gccccatggc gaggcgctcg
      961 tccgtcatga cgtcgcgttc ggccgtgagc gagaccggcc cgagcgacca cgcggcgtcg
     1021 agtccgtggc gaagcctccg gccgttcacg tacgagcgat cgaagaagac gccgtcctcg
     1081 aacaccgtct cgccgcgaag ccccagcagg ttgtcgagcc ggctggtgac gacgttgacc
     1141 ccgagttgca gcggcgcggc gacccggtgg gaggtcgaca cgaagggggc gatgacgacg
     1201 cgggcggcga tcgcgtcgtg cccgccttcg gtctgcgacg tccgggcatg tgtgccgtcg
     1261 cggtcgaaat agcccgcctg ataggagaac gcacggttgc gtgtccggcc gtgcaccatg
     1321 acgccgacgt cgcggcccgg ggcaatctgt cgcgccgcca tcgaccgcac cacgaagtcg
     1381 aggtccccgc cgctcgtcag ctggtcgcgg ctgaacggga tcttgaatct cccggcgcgg
     1441 atctccagcc tgcggctgaa gcggtagttc acgtactggt ggccttccgg ttccacgctg
     1501 tcgcccagct cgtaggcgag ctcgaattcc agcttctgga agaaggtacc gtctacttcg
     1561 atgcgtcgcg tctgccactc ggcatcgggc ccgtcgaggc cctgacgctt cgaccccgaa
     1621 agcaccacgc cgtcgacccg ggcgcgcagc tcgagctcgc ccccgggcac gtgcacggtc
     1681 ggacgccgat cgaacgtcac ggtctgcgcc gagcccgagg cggcgctggt tgccagcagc
     1741 agggcgcaca aacatccggc ggccgccgga ccgtccgccc tcatgacgcc ggcgaaccgg
     1801 ccagctccgc gtcggcgtcc gggaactcga ggcgatagcg cagcgcgtac gcctcgctgt
     1861 cggcgagcag ctgctcgtgc gtgccgaagg ccgtgatgtg accgtcgtcg agcagataga
     1921 tctgttgcgc gcggcgaacg gtggccatgc gatgggcgat cgtgatcgac gtacagccgc
     1981 gcatcagccg cgtcagcgcg tcgaagacca gcgcctccga ttcggggtcg agagccgctg
     2041 acggctcgtc gagcagcagg atcggtgcct ggcggatgac ggcccgcgcg atcgcaatcc
     2101 gctgccgctg tccgcccgac agcgtctcgc cgcgttcgcc gatgacggtg tcgtagccgt
     2161 ggagcatccg gacgatgaac tcgtcggcgt tggccagcac cgccgcctcg atgatctcct
     2221 cgcgtgtcgc gccgggccgg ccgtaggcga tgttctgcca gaccggcccg tggaagagca
     2281 ccggctcctg cgggacgagg ctgatctgat cgcgcagcga cgtgagcgtg aaatgccgca
     2341 cgtcgcggcc gtcgatccgc accgacccgt cgaccggatc gtagagacgg agcagcagcg
     2401 acaacagcgt ggatttgccc gcgccggtcg gccccacgat cgcaatccgc gcgcccggct
     2461 cgacgacgag gttgatgccg cggagtaccg gctgctggtc gggtgcgtag cggaaatgga
     2521 cgtcgcgcag ctcgagcgca ccgcggaacc gcggcgcctg cacggcgtcc gggcgctcgt
     2581 ccacctggct cctggtccgc agcagatcgc cgatccgttc cagggcgacc gatgtcttcg
     2641 ataccgtgtc ggtcatctt
//
LOCUS       DASSYW010000978         2068 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1041578, whole genome shotgun sequence.
ACCESSION   DASSYW010000978 DASSYW010000000
VERSION     DASSYW010000978.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2068)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2068)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2068
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1041578"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..225)
                     /locus_tag="VFN38_15440"
     CDS             complement(<1..225)
                     /locus_tag="VFN38_15440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HET9013219.1"
                     /translation="MKTALCLAVALIGTSTIASAQQAPDGAATFNRACATCHREGLDT
                     APTPTVLRQLTPEGIVNSLTNGRMQVQGASL"
     gene            244..>2068
                     /locus_tag="VFN38_15445"
     CDS             244..>2068
                     /locus_tag="VFN38_15445"
                     /inference="COORDINATES: protein motif:HMM:NF024545.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FG-GAP-like repeat-containing protein"
                     /protein_id="HET9013220.1"
                     /translation="MFRRTGALAVASAVALLAWQLSATASPAQGPAPPAAREVTFRLI
                     VVSSEAAAREVAQRLRRGADADALAAAESIDPSASRGGLIGPVVLAELRAEMRDALEA
                     LKPGETSGVIRLPTGFGVVQLAEPRGGRRLRSTEIGGLAATGAVQPTVSVDGFAEANT
                     ILQEAPKANDDWNMHPQQICEVRRSSLTEMIASMTELTASMKAPGASPAPDPIDVIQA
                     DVILGQIHAYDGRMAETIARFEQAYPGATKNFPDALPQLEEMLGIAHLHKAEMDSGAY
                     RTPGDRCLLSAKPAALKDPRDARTAIDYFNKALARRPGDGELIWLLNLAHMAAGSYPA
                     GVPAAALIPPSAFESGENIGRFTDVAPALGLESFSSAGGVIVDDFDNDGTLDILTSNF
                     DSCGAMQLFRRGADRRFHDQAARAGLTGELGGLNLIQADYDNDGCKDVLVLRGGWEQP
                     QRKSLLRNNCDGTFTDVTVASGMASPATSTQTAVWADIDNDGFLDLFVGNENRPSQLF
                     RNKGNGTFEDIARVAGVARTAFTKAVAAADYDRDGDPDFYLTNLGGGNFLYRNNGDRT
                     FTEVSEQAGVPGPERGFPTWFFDYDNDGWDDLLVSSYFLSVD"
BASE COUNT          315 a          724 c          721 g          308 t
ORIGIN      
        1 cagcgatgcc ccctgcacct gcatgcgccc gttcgtcagc gagttgacga tcccttccgg
       61 cgtcagctgc cgcagtaccg tgggcgtcgg ggcggtatcg agcccttcgc gatgacatgt
      121 cgcgcaggcg cgattgaacg tggcggcacc atcgggtgct tgctgcgcgg acgcaatggt
      181 ggaggtgccg atcagcgcga cggccaggca aagggcggtc ttcatgaggc ttatgatacc
      241 ggcatgtttc gccggaccgg cgcgctcgcc gtcgcctcgg ccgtcgccct gctcgcgtgg
      301 cagctctcgg cgactgcctc gccggcgcag ggcccggcgc ctccggccgc ccgcgaggtg
      361 acgttccggt tgatcgtcgt gagcagcgaa gcggccgccc gcgaggtggc ccagcggttg
      421 cgacgcggtg ccgacgccga cgccctggcg gccgccgaat cgatcgatcc ctccgcgtcg
      481 cgcggcggcc tcatcggtcc cgtggtgctg gcggagctgc gcgcggagat gcgcgacgcg
      541 ctggaggcgt tgaagccggg cgagacgagc ggcgtgattc ggctgcccac cgggttcggc
      601 gtcgtgcagc ttgccgagcc gcgcgggggg cgccgcctgc gctccacgga aatcggcggc
      661 ctcgccgcca ccggcgccgt gcagcccacc gtgagcgtgg acggcttcgc ggaggcgaac
      721 acgatcctgc aggaggcgcc gaaggccaac gacgactgga acatgcaccc gcagcagatc
      781 tgcgaggtcc gccggtcgtc gctcaccgaa atgatcgcgt cgatgacgga gctgaccgcg
      841 tcgatgaagg cgccgggcgc ctcgcccgct cccgatccga tcgacgtgat ccaggccgac
      901 gtgatcctgg ggcagatcca cgcctacgac gggcgcatgg ccgagacgat cgcgcggttc
      961 gagcaggcct atcccggcgc gacgaagaac tttcccgacg cgctgccgca gctcgaggag
     1021 atgctcggca tcgcgcacct gcacaaggcg gagatggaca gcggcgcgta tcgcacgcca
     1081 ggcgaccgct gcctgctgtc ggcgaagccc gcggccctca aggatccgcg ggacgcacgc
     1141 accgccatcg actacttcaa caaggcgctc gcgcgccgcc ccggcgacgg cgagctgatc
     1201 tggctgctga acctcgcgca catggcggcg ggctcgtatc ccgccggcgt gccggcagcc
     1261 gcgctcattc caccgtcggc gttcgagtcg ggcgagaaca tcggccggtt cacggacgtc
     1321 gcgccggcgc tcggcctcga gtcgttctct tcggcgggcg gcgtgatcgt cgatgacttc
     1381 gacaatgacg gcacgctgga catcctgacg tccaatttcg acagctgcgg ggcgatgcag
     1441 ctgtttcgcc gcggcgcgga ccggcgcttc cacgatcagg ccgcccgcgc cggcctcacc
     1501 ggcgagctcg gcggcctcaa cctgattcaa gccgactacg acaacgacgg ctgcaaggac
     1561 gtgctcgtgc tgcgcggcgg ctgggagcag ccgcagcgca agtcgctgct gcggaacaac
     1621 tgcgacggca cgttcaccga cgtcaccgtg gccagcggca tggccagccc cgccaccagc
     1681 acgcagacgg ccgtgtgggc cgacatcgac aacgacggct tcctggatct gttcgtcggc
     1741 aacgagaacc ggccgtcgca gctgttccgc aacaagggca acggtacctt cgaggacatc
     1801 gcgcgggtgg ccggcgtcgc gcgcaccgcg ttcacgaagg ccgtggccgc cgccgactac
     1861 gatcgcgacg gcgatccgga tttctatctg acgaatctcg gcggcggcaa cttcctgtat
     1921 cgcaacaacg gtgaccgcac cttcacggag gtgtctgagc aggccggtgt gccgggcccc
     1981 gaacgcgggt ttcccacctg gttcttcgac tacgacaacg acggctggga cgacctgctg
     2041 gtgtcgagct acttcctgtc ggtggacg
//
LOCUS       DASSYW010000979         2371 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_779641, whole genome shotgun sequence.
ACCESSION   DASSYW010000979 DASSYW010000000
VERSION     DASSYW010000979.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2371)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2371)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2371
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_779641"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            67..750
                     /locus_tag="VFN38_15450"
     CDS             67..750
                     /locus_tag="VFN38_15450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013221.1"
                     /translation="MPDAIASRLLARASELDALRSDDVTVADLRAAAAEAGISGSAFD
                     AALEELRQSGRLPTSNPLPRRRNGARAFVVLLTGAVVLAAGLLVARLPSPSRDAPETS
                     AGESLNEVSAVAAATRAVIRSADGAPPVTMAVGREGQLFSALGVAQGPNGRRVGRIEM
                     SGAVGSATTPAALDVSDAAGEVMFTVPVDGAEVELIVPGTAQLARGHAVRLVRDRVGA
                     PLRAEVVTP"
     gene            756..1301
                     /locus_tag="VFN38_15455"
     CDS             756..1301
                     /locus_tag="VFN38_15455"
                     /inference="COORDINATES: protein motif:HMM:NF020909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1993 domain-containing protein"
                     /protein_id="HET9013222.1"
                     /translation="MSLSPEDASVGVFVRGLSNLKTQLMKAEAHAAASSMDAAALLDA
                     RLPQGALSDARHDLHTYTLSAQVHWATEGARLAIARIVGAPAVPVASDARNFAELHQR
                     IDATIAHLREITAADLEAGLARTIVVEHRHGTVTADGGRFLLAYAIPHFFYHVTTAYD
                     ILRSQGVPLTMGDFLGDWGRA"
     gene            1334..2005
                     /locus_tag="VFN38_15460"
     CDS             1334..2005
                     /locus_tag="VFN38_15460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013223.1"
                     /translation="MRLLLIAVAFLPGCTSFANVRSARVRPGTTFDLQSSFASNPGDA
                     AGWLLGNNLDCAERCGGGILGGELGVARGFVGHSLPFTLGGGVMGIVPYAEGYVQLAQ
                     GERPAGIGARFGVSPLTANPMGQVYARVDLPIAAGRHLLWNPALFHASGSTAAASASV
                     TALVNGIGLESDSDETLTPSLAFVIARAQHDFPPVREGPGHAWFIVAGLRVAFGRHES
                     ARVPR"
     gene            2108..>2371
                     /locus_tag="VFN38_15465"
     CDS             2108..>2371
                     /locus_tag="VFN38_15465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013224.1"
                     /translation="MHVLVVTGASGAGKTTAVRALEARALPGVRCFHFDSIGVPSDEE
                     MRREHGGGEQWQAWATERWLRELDRLDAGVHVAVLDGQTRPSFV"
BASE COUNT          321 a          811 c          845 g          394 t
ORIGIN      
        1 cttccgtccc ctctgcagag atccgtcgtg accgaccggc gtgaaagaga cgcgacgtcc
       61 aacgttttgc ccgacgcaat cgcgtcgcgc ctgctcgcgc gcgcgagcga gctggatgcg
      121 ttgcggagcg acgacgtgac cgtcgccgat ctccgcgccg cggcggccga ggcgggcatc
      181 tcgggctccg ccttcgacgc ggcgctcgaa gagctccggc agagcggacg gctgccgacg
      241 tcgaatccgt tgccgcgccg ccgcaacggg gcgcgggcgt tcgtcgtgtt gctgaccggc
      301 gccgtcgtcc tcgcggccgg actcctcgtc gccagactgc catcgccatc gcgtgatgcg
      361 cccgaaacga gcgcgggcga gtcgttgaac gaggtgagcg ccgtcgcggc tgccacgcgc
      421 gccgtcatcc gctcggctga cggcgcgccg cccgtcacga tggcggtcgg tcgggagggg
      481 cagctcttct ccgcgctcgg cgtggcacag ggtccgaatg ggcgacgcgt cgggcggatc
      541 gagatgtcgg gcgccgtcgg ctcggccacg actcccgccg cgctcgacgt cagtgacgcg
      601 gcgggcgaag tcatgttcac ggtgcccgtg gacggtgcgg aggtggagct catcgtgccg
      661 gggacggcgc agctcgcgcg tggccacgcc gtgcgcctgg tgcgcgaccg cgtgggtgcg
      721 ccgctgcggg cagaagtggt cacgccctga gcggcatgtc tctgagtccc gaggacgcat
      781 cggttggcgt gttcgttcgc gggctgtcca accttaagac gcagttgatg aaggcggaag
      841 cgcatgccgc tgccagtagc atggacgcgg ccgcgctgct cgacgcgcgg ctcccacagg
      901 gtgcgctctc ggatgcacgg catgatctgc acacgtacac gctgagcgcg caggtgcact
      961 gggccaccga gggggcgagg ttggcgatcg cgcggatcgt cggagcgcca gcagttcccg
     1021 tcgccagtga tgcgaggaac ttcgcggagc tccaccagcg catcgatgcg acgatcgccc
     1081 atctccggga gatcacagcc gcagatctcg aggcgggact cgcccgcacc atcgtggtcg
     1141 agcaccgtca tggcaccgtg accgcggacg gtggccggtt cctgctcgcc tacgcgatcc
     1201 cccacttctt ctaccacgtg accaccgcct acgacatcct tcgcagccag ggggtgccgc
     1261 tcacgatggg tgacttcctc ggcgactggg ggagggcctg agccgacgcg gcggtgaatt
     1321 ccgcgttggt agcatgcgcc ttctcctcat cgccgtcgcg ttccttcctg gctgcacctc
     1381 gttcgccaac gttcgctccg cgcgagtgcg cccgggtacg acgttcgacc tgcaatcatc
     1441 gttcgcatcg aatccgggcg acgctgcggg ctggctgctc gggaacaacc tcgactgcgc
     1501 cgagcgatgt ggcggcggga tcctcggcgg cgagctcggc gtcgcgcgcg gattcgtggg
     1561 ccactcgctg ccgttcacgc ttggcggcgg cgtgatgggc atcgtcccgt atgccgaggg
     1621 ctacgtgcag ctcgcgcagg gcgagcgtcc cgccgggatc ggggcgcgct tcggcgtctc
     1681 accgttgacc gcgaacccga tgggccaggt gtacgcccgc gtcgatcttc ccatcgcggc
     1741 ggggcggcat ctgctgtgga accctgcact gttccatgcg tcgggcagca ccgcggcagc
     1801 cagcgcgtcc gtcactgcgc tcgtgaacgg cataggactg gagagtgaca gcgacgagac
     1861 cctcacgccc tcgctcgcgt tcgtcatcgc ccgcgcgcag cacgactttc ctcctgtacg
     1921 cgagggcccg gggcacgcct ggttcatcgt cgcgggactg cgtgtggcgt tcggacgaca
     1981 cgagtcggcg cgagtgccgc gctagcgacg ctcgagtcgc cgggccattc tccgtccacg
     2041 cgaaacagag gtggtagtga acgcatatca ttatccggtg caacctcctt tgccgtgatg
     2101 tgttcggatg cacgtcctgg tcgtgacggg cgcctcgggc gcgggcaaga cgaccgcggt
     2161 ccgcgcactc gaggcgcgcg cgcttcccgg cgtccgctgc ttccatttcg actcgatcgg
     2221 cgtgccgagc gacgaggaga tgcgtcgcga gcatggcggc ggtgagcagt ggcaggcatg
     2281 ggcgaccgag cgctggctgc gcgagctcga tcggctcgat gccggcgtgc acgtcgccgt
     2341 cctcgatgga cagacccgtc cgtcgttcgt c
//
LOCUS       DASSYW010000980         2845 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1152296, whole genome shotgun sequence.
ACCESSION   DASSYW010000980 DASSYW010000000
VERSION     DASSYW010000980.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2845)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2845)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2845
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1152296"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            28..1347
                     /locus_tag="VFN38_15470"
     CDS             28..1347
                     /locus_tag="VFN38_15470"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase"
                     /protein_id="HET9013225.1"
                     /translation="MDKLVSLAKRRGFIFQSSEIYGGTGSVWDYGPLGVELKKNVKDR
                     WWHAMVRARDDIEGLDAAILMHPRVWEASGHVAGFVDPLVDCRTCKGRFRADKLEDAQ
                     CPQKPSKHPGEHTACQLTEARQFNLMFKTFMGPLEETASVVYLRPETAQGIFVNFLNV
                     QQASRQKVPFGIAQIGKAFRNEITPGNFIFRTREFEQMEMQFFVEPGTDMEWFEFWKS
                     ERLKWHHSLGLSPERLRYKAHEQLAHYARAAFDIEFDFGGTLGFQEIEGIHNRGDFDL
                     GRHQEYSSKKLEYFDQPKNKRYLPYVIETSVGADRTTLAALVNAYREETVEGEAEGRT
                     VLRLHPSLAPIKAAVFALTKKDGMPEMAHRIAGELRQHFPVDYDETGSIGKRYRRQDE
                     VGTPFCITVDGDSVKDGTVTVRDRDTLKQDRIGADALRGYLRERLPG"
     gene            1344..>2845
                     /locus_tag="VFN38_15475"
     CDS             1344..>2845
                     /locus_tag="VFN38_15475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013226.1"
                     /translation="MSAPLSIERLRREGEHFMEELSREFYEAHSGLKGAAELQPIYHK
                     HRDILGPDALEVAREAFVGSAEGSEERRSARLLLDWQVESQSSRQLATLDEREIAWEG
                     DAVLQLGDGRQVSYQRAAIEIGNSTDRRERAMIEDARAAKVGAELAPMRRERLQRERD
                     ITESLGLASGYNPSWELLSGISLSGLRDECARFLRDTQAMWDEVYPAFVRKGLGMEPR
                     EATRADALALFRAREFDQYFPAAEMEPAIRRQMSEMGTDATADGRVRFDTGEREGKRS
                     RAFCAPVKVPDEVYLVLRPHGGQTDWNTFLHELGHALHFAYMRPDLPMEYRWVGDNSV
                     TEGYAMLFDHLMQDAGWLQRYTGLDRKTTPGFLRSAGFEELHFLRRYSAKLIYETQLF
                     GGEVSWDSAPDLYVELLTGATTFQYARADAFVDVDPRYYAARYLRAWQLQALITETLV
                     ERYDADWWRNPRAGPWIAEALFGEAQRELAHEQAERVSGKTLSFAPLVRG"
BASE COUNT          474 a          904 c         1074 g          393 t
ORIGIN      
        1 gctagcgtgt caacgaatcc cgacgtcatg gacaagcttg tgtcgcttgc aaagcgacgc
       61 ggtttcatct tccagtcctc cgagatctac ggaggcaccg ggtccgtttg ggattacggg
      121 ccgttaggcg tcgagctcaa gaagaacgtc aaggatcgct ggtggcacgc gatggttcgt
      181 gcgcgcgacg acatcgaggg actcgacgcg gcgatcctga tgcatccgcg cgtctgggag
      241 gcctcggggc acgtggcggg gttcgtcgat ccgctcgtgg actgccgcac gtgcaagggc
      301 cggttccgcg ccgacaagct cgaggacgcg cagtgcccgc agaagccgtc gaagcatccc
      361 ggcgagcaca cggcctgcca gctcaccgag gcgcggcagt tcaacctgat gttcaagacg
      421 ttcatgggcc ccctcgagga gacggcgtcc gtcgtctacc tgcggccgga gacggcgcag
      481 gggatcttcg tgaacttcct gaacgtgcag caggcgagcc ggcagaaggt gccgttcggc
      541 atcgcgcaga tcggcaaggc gttccgcaac gagatcacgc cggggaactt catcttccgc
      601 acgcgcgagt tcgagcagat ggagatgcag ttcttcgtcg agccgggcac ggacatggag
      661 tggttcgagt tctggaaatc cgagcgcctg aagtggcacc actcgctcgg gctctcgccg
      721 gagcggctgc gctacaaggc gcacgagcag ctggcgcact acgcgcgcgc cgcgttcgac
      781 atcgagttcg acttcggcgg cacgctcggc ttccaggaga tcgaggggat ccacaaccgc
      841 ggcgacttcg acctggggcg gcaccaggag tactccagca agaagctgga gtacttcgac
      901 cagccgaaga acaagcgcta cctgccgtac gtgatcgaga cgtcggtggg cgccgaccgg
      961 acgacgctgg ccgcgctggt gaacgcgtac cgcgaggaga cggtggaggg cgaggcggag
     1021 gggcgcacgg tgctgcgcct gcacccgtcg ctcgcgccga tcaaggcggc ggtgttcgcg
     1081 ctgaccaaga aggacggcat gccggagatg gcgcaccgga tcgccggcga gctgcgccag
     1141 cacttcccgg tggactacga cgagacggga agcatcggca agcggtaccg ccggcaggac
     1201 gaggtgggga cgcccttctg catcacggtg gacggcgact cggtgaagga cggcacggtg
     1261 acggtgcgcg accgcgacac gctgaagcag gaccgcatcg gcgccgacgc gctgcgcggc
     1321 tacctgcggg agcggctgcc cggatgagcg ccccgctgtc gatcgagcgg ctgcggcgcg
     1381 agggggagca cttcatggag gagctctcgc gcgagttcta cgaggcgcac agcgggttga
     1441 agggggcggc ggagctgcag ccgatctacc acaagcaccg cgacatcctg gggcccgacg
     1501 cgctcgaagt ggcgcgcgag gcgttcgtcg gcagcgccga ggggagcgag gagcgccgct
     1561 cggcgcgcct gctgctggac tggcaggtgg agtcgcagag cagccggcag ctcgcgaccc
     1621 tcgacgagcg cgagatcgcc tgggaagggg acgccgtcct ccagctcggc gacggccggc
     1681 aggtgtcgta tcagcgcgcc gcgatcgaga tcggcaacag caccgaccgg cgcgagcggg
     1741 cgatgatcga ggacgcgcgc gccgcgaagg tgggagcgga gctggcgccg atgcggcgcg
     1801 agcggctcca gcgcgagcgc gacatcaccg agtcgctcgg gctggccagc ggctacaacc
     1861 cgagctggga gctgctcagc gggatctcgc tgagcgggct gcgcgacgag tgcgcgcgct
     1921 tcctgcgcga cacccaggcg atgtgggacg aggtctatcc cgccttcgtg cgaaaggggc
     1981 tcgggatgga gccgcgcgag gcgacgcgcg ccgacgcgct cgcgctgttc cgcgcgcgcg
     2041 agttcgacca gtacttcccc gcggccgaga tggagccggc catccgccgg cagatgagcg
     2101 agatggggac ggacgcgacg gccgacgggc gggtgcgctt cgacacgggc gagcgggagg
     2161 gcaagcggtc gcgcgccttc tgcgcgccgg tgaaggtgcc ggacgaggtg tacctggtgc
     2221 tgcgcccgca cggcgggcag accgactgga acaccttcct ccacgagctc gggcacgcgc
     2281 tgcacttcgc gtacatgcgg ccggacctgc cgatggagta ccggtgggtg ggcgacaact
     2341 cggtgaccga ggggtacgcc atgctgttcg accacctgat gcaggacgcg gggtggctgc
     2401 agcgctacac ggggctcgac cggaagacga cgccgggatt cctccgcagc gcggggttcg
     2461 aggagctgca cttcctgcgt cgctacagcg cgaagctcat ctacgagacg cagctgttcg
     2521 ggggcgaggt gtcgtgggac tcggcccccg acctgtacgt cgagctcctc accggggcga
     2581 cgaccttcca gtatgcgcgc gccgacgcct tcgtggacgt ggacccgcgc tactacgccg
     2641 cgcgctacct gcgcgcctgg cagctgcagg cgctgatcac cgagacgctc gtcgagcggt
     2701 acgacgccga ctggtggcgc aacccgcgcg cgggcccgtg gatcgccgag gcgctgttcg
     2761 gcgaggcgca gcgcgagctg gcgcacgagc aggcggagcg ggtgtcgggc aagacgttga
     2821 gcttcgcgcc gttggtgcgg ggaat
//
LOCUS       DASSYW010000981         4905 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_728669, whole genome shotgun sequence.
ACCESSION   DASSYW010000981 DASSYW010000000
VERSION     DASSYW010000981.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4905)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4905)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4905
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_728669"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1258
                     /locus_tag="VFN38_15480"
     CDS             <1..1258
                     /locus_tag="VFN38_15480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013227.1"
                     /translation="RDGALTSSALRRMGHADDARAFLDWFVPYLFPDGKVPCCVDHRG
                     ADPVTENDADGELLYLAAEHFRITGDSATVRRHWAALARVAAHLDSLRNTRRTPRYRA
                     PDSLIVFGLLPPSISHEGYSAKPAYSYWDDWWGVRGLDDAGLLARVAGDAPAAARYTA
                     AGREMRADVVASVARSMAVHRVRTLPGAAELGDLDPTSSTIALEPAQALGDLPRDAVL
                     ATFDSAWATLERRRQPGSTWDVFVPYEWRDVGAFIRLGQPERAHAYAAWLLTMRRPGE
                     WNQWSEAVWREPRTPRFVGDMPHGWVASDFLRATLDMIAYERERDSTLVVGAGIPLEW
                     ARADSGVTVRGLRTWWGPLSVRAERAGAGVRVVVSGVRPPGGIELRAPFGARPASALV
                     NGTPATMLDDGRAVLLRAPGTVEFRY"
     gene            complement(1285..2640)
                     /locus_tag="VFN38_15485"
     CDS             complement(1285..2640)
                     /locus_tag="VFN38_15485"
                     /EC_number="3.2.1.21"
                     /inference="COORDINATES: protein motif:HMM:NF012457.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008422 - beta-glucosidase activity
                     [Evidence IEA];
                     GO_process: GO:0030245 - cellulose catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GH1 family beta-glucosidase"
                     /protein_id="HET9013228.1"
                     /translation="MNASHRFPDSFLWGASTSAYQIEGSPLADGAGPSIWQRFAHSPG
                     RTVNGDSGDVACDHYRRFADDVALMGELGLQAYRFSIAWSRILPEGTGKVNRAGLGFY
                     ERLVDALLAAGITPNATLFHWDLPAALDDRGGWLNRDVADWFGDYARVVFAALGDRVP
                     MWATLNEPWVVTDGGYLHGALAPGHKNLFEAPIASHNLMRAHGMGVQAFRAESRAGQV
                     GLVVNLEPKDPATDSAEDARAAQRGDAYMNRQYLDPVFKGSYPDEMRDIFGAAWPDFP
                     ATDFALIGQPIDFLGINYYTRGVVRDDPTALPVRIAYVRQPEHAYTETGWEVHPPSLT
                     RTLLWVTERYGRIPLYVTENGAAFYDAPHAIDGAVNDPLRVWYYREHLKACREAIAHG
                     ADLRGYFAWSLLDNYEWSLGFSKRFGIVHVNYATQERTPKASALYYRDVIRSNGESLG
                     G"
     gene            2697..3845
                     /gene="ugpC"
                     /locus_tag="VFN38_15490"
     CDS             2697..3845
                     /gene="ugpC"
                     /locus_tag="VFN38_15490"
                     /inference="COORDINATES: protein motif:HMM:NF008653.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate ABC transporter
                     ATP-binding protein UgpC"
                     /protein_id="HET9013229.1"
                     /translation="MTAATVVGTSNAARVVLEGVRKEYEGGVVAVHGVDLTVNAGELV
                     VLVGPSGCGKSTTLRMVAGLESITSGRLSIGDRVVNDVPPSDRDIAMVFQSYALYPHM
                     SVRDNMAFALKLRKRPRAEIAARVEAAAATLGLGELLDRTPRQLSGGQRQRVAIGRAI
                     VREPSVFLFDEPLSNLDAALRSEMRRELATLHRRLEATMLYVTHDQVEAMTLGDRIVV
                     MHEGRVRQVDSPGEVYDHPHDTFVAGFLGSPPMNLLSGVLVQRDGRWFVQLAEAPALQ
                     LALPPELAAAADRARSRDVIVGVRPEHLEAQPRVGETSPADSLAATVELAEPLGHEQL
                     LHLRAGGVSFTVRGAPGVRPDVGSLVSVRMAPDRLHLFDAASGVSLTR"
     gene            3910..>4905
                     /locus_tag="VFN38_15495"
     CDS             3910..>4905
                     /locus_tag="VFN38_15495"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HET9013230.1"
                     /translation="MIDRRSGTDRQSTHDASFGDEPGRPSKVRGSLVAGRYVVERMLG
                     RGGMATVYLAHDRLLDRPVALKILRRELANSVAMERFAREVGVVGRLRHAHIVPLHDS
                     GVYDELPFYVMAYIEGESLQERLAREGPLPIGEIVRFGAQVAEALAYAHREGVLHRDV
                     TPGNILIADDNAYVADFGIARMFNETARPRTTESGFILGTPTYMSPEQASGELECDGR
                     SDVYSLGCVLYEATTGTPPFVGATFQAVIAGRFGAPPAPVTAVRTGVPQELADAIARA
                     MMTSAADRFQSAAELGAALEAAMPTEMARARAGRGRLRRAAPVLAVLVGALLVAGY"
BASE COUNT          633 a         1713 c         1873 g          686 t
ORIGIN      
        1 ccgcgacggc gcgctcacct cgtcggcgct caggcgcatg ggccacgccg acgacgcgcg
       61 cgccttcctc gactggttcg tgccgtacct ctttcccgac ggcaaggtgc cgtgctgcgt
      121 cgaccaccgc ggcgcggacc cggtgacgga gaacgacgcc gacggggagc tgctgtacct
      181 ggcggcggag cacttccgga tcaccggcga ctccgcgacg gtgcgccgcc actgggcggc
      241 cctcgcccgc gtcgccgcgc atctcgactc gctgcgcaac acgcgtcgca cgccgcggta
      301 tcgcgcgccc gactcgctga tcgtcttcgg cctgcttccg ccgtcgatca gccacgaggg
      361 ctactccgcc aagccggcct attcctactg ggacgactgg tggggggtgc gcgggctcga
      421 cgacgccggc ctgctggcgc gcgtcgccgg tgacgcgccg gcagcggcgc ggtacaccgc
      481 cgccggccgc gagatgcgcg cggacgtcgt cgcgtcggtc gcgcgatcga tggcggtcca
      541 ccgcgtgcgg acgctgcccg gcgcggcgga gctgggtgat ctggacccga cctcctccac
      601 catcgcgctg gagccggcgc aggcgctggg cgacctgccc cgcgacgcgg tgctggccac
      661 cttcgacagc gcgtgggcca cgctggagcg gcggcggcag cccggctcga cgtgggacgt
      721 cttcgtgccc tacgagtggc gcgacgtggg cgcgttcatc cggctcgggc agcccgagcg
      781 cgcgcacgcc tacgccgcat ggctgctcac catgcgccgg ccgggcgagt ggaaccagtg
      841 gagcgaggcc gtgtggcgcg agccgcgaac gccccggttc gtcggggaca tgccgcacgg
      901 ctgggtggcg tcggacttcc tgcgcgccac gctcgacatg atcgcgtacg agcgcgagcg
      961 ggattccacg ctcgtggtgg gggcgggcat cccgctggaa tgggcgcgcg ccgacagcgg
     1021 cgtcacggtc cgcggcctgc gcacgtggtg ggggccgctg tcggtacggg ccgagcgcgc
     1081 cggcgccggc gtgcgggtgg tggtgagcgg cgttcggccg ccgggcggca tcgagcttcg
     1141 cgcgccgttc ggggcgcggc cggccagcgc gctcgtgaac gggacgcccg cgacgatgct
     1201 ggacgacgga cgcgcggtgc tgctgcgcgc gcccggcacg gtggagttcc gctattgagc
     1261 ccgccgccgg cccgcccccg ccgctcagcc gccgagcgac tcgccgttgc tgcggatcac
     1321 gtcgcggtag tagagcgcgc tcgccttggg cgtgcgctcc tgggtggcgt agttcacgtg
     1381 cacgatgccg aaccgcttgg agaagccgag gctccactcg tagttgtcga ggaggctcca
     1441 ggcgaagtag ccgcgcaggt cggcgccatg ggcgatggcc tcgcggcagg ccttgagatg
     1501 ctcccggtag taccagaccc ggagcgggtc gttcaccgcg ccgtcgatgg cgtggggcgc
     1561 gtcgtagaac gccgcgccgt tctccgtgac gtacagggga atgcggccat agcgctccgt
     1621 cacccacagg agggtgcgcg tgagcgaggg gggatgcacc tcccagccgg tctccgtgta
     1681 cgcatgctcg ggctggcgca cgtaggcgat gcgcaccggc agggcggtgg ggtcgtcgcg
     1741 gacgacgccg cgggtgtagt agttgatgcc gaggaagtcg atgggctggc cgatcagcgc
     1801 gaagtcggtg gcgggaaagt ccggccatgc cgcgccgaag atgtcgcgca tctcgtcggg
     1861 atacgagccc ttgaacaccg ggtcgaggta ctgccggttc atgtacgcgt cgccgcgctg
     1921 ggcggcccgc gcgtcctcgg cgctgtccgt cgccggatcc ttgggctcga ggttcaccac
     1981 cagccccacc tggccggcgc gcgactcggc acggaaggcc tgcaccccca tgccgtgcgc
     2041 ccgcatgagg ttgtggctgg cgatcggcgc ctcgaagaga ttcttgtggc cgggcgcgag
     2101 ggcgccgtgc aggtagccgc cgtcggtgac gacccacggc tcgttgagcg tcgcccacat
     2161 cggcacgcgg tcgccgagcg cggcgaacac gacgcgcgcg tagtcgccga accagtcggc
     2221 gacgtcgcgg ttcagccagc cgccgcgatc gtcgagcgcc gccgggaggt cccagtggaa
     2281 cagcgtcgcg ttcggcgtga tgcccgccgc caggagggcg tccaccaatc gctcgtagaa
     2341 cccgagcccg gcccggttca ccttgccggt tccttccgga aggatgcggc tccaggcgat
     2401 gctgaagcgg taggcctgga gtccgagctc gcccatgagc gcgacgtcgt ccgcgaagcg
     2461 ccggtaatgg tcgcaggcca cgtcgccgct gtcgccgttc acggtgcgcc cggggctgtg
     2521 cgcgaaccgc tgccagatgc tcggccccgc gccgtcggcc agcggactgc cctcgatctg
     2581 atacgccgac gtcgaggctc cccacaggaa ggagtcaggg aagcgatgcg atgcgttcat
     2641 gcaggacaag atagcacggg tggcgcgggc cgcggcccca cggaatgggg gcggcggtga
     2701 ccgcggccac ggtggtgggc acgagcaatg ccgcgcgggt ggtgctggag ggggtgcgca
     2761 aggaatacga gggcggcgtg gtggccgtgc acggcgtgga cctgacggtg aacgccggcg
     2821 agctcgtggt gctcgtgggc cccagcggct gcggcaagag cacgacgctg cgcatggtcg
     2881 ccgggctgga gtccatcacg tcgggccggc tgagcatcgg cgatcgcgtc gtgaacgacg
     2941 tgcccccctc cgaccgggac atcgcgatgg tgttccagag ctacgcgctg tatccgcaca
     3001 tgtccgtgcg agacaacatg gcgttcgcgc tcaagctccg gaaacggccg agggccgaga
     3061 tcgcggcgcg ggtggaggcg gcggccgcca ccctggggct cggcgagctg ctggaccgga
     3121 ccccgcgaca gctctccggc gggcagcggc agcgggtggc gatcgggcgc gcgatcgtgc
     3181 gcgagccgag cgtgttcctg ttcgacgagc cgctgtcgaa cctggacgcc gcgctgcgca
     3241 gcgagatgcg gcgcgagctc gccacgctgc accgccggct ggaggcgacg atgctctacg
     3301 tcacgcacga tcaggtggag gcgatgacgc tgggcgaccg catcgtcgtg atgcacgagg
     3361 gacgcgtgcg gcaggtggac tcgccgggag aggtgtacga ccatccgcac gacaccttcg
     3421 ttgccggctt tctcggcagc cctcccatga acctgctgag cggcgtcctg gtccagcgcg
     3481 acggacggtg gttcgtccag ctggccgagg cgccggcgct ccagctcgcg ctcccgccgg
     3541 agctcgccgc cgcggccgac cgcgcgcgga gccgcgacgt catcgtgggt gtgcggcccg
     3601 agcacctcga ggcgcagccc cgcgtggggg agacgtcccc cgccgacagc cttgccgcca
     3661 ccgtggagct ggccgagccg ctgggccacg agcagctcct ccacctgcgg gcgggaggcg
     3721 tgtcgttcac ggtgcgcggc gcgcccggcg tgcggcccga cgtcggctcg ctcgtgtcgg
     3781 tccgcatggc ccccgatcgg ctgcacctgt tcgacgccgc gtcgggggtg tcgctcacgc
     3841 gctaggcgcc ctgtcgccgt ggacaggggt gcgctatgat ggtgcacctc ccaccgctgg
     3901 cgcgccgcga tgatcgaccg acgatcgggg acggaccggc agtccacaca cgacgcgagc
     3961 ttcggcgacg agccgggccg tccctcgaag gtccgcggct cgctcgtggc cggacgctac
     4021 gtggtggagc ggatgctggg ccggggcggg atggcgacgg tgtacctcgc ccacgaccgc
     4081 ctgctcgacc ggcccgtggc gctgaagatc ctccgccgcg agctggcgaa ctcggtggcg
     4141 atggagcgct tcgcccgcga ggtgggggtg gtggggcgcc tgcggcacgc gcacatcgtg
     4201 cccctgcacg actccggtgt gtacgacgag ctgccgttct acgtgatggc gtacatcgag
     4261 ggcgagtcgc tccaggagcg actcgcgcgc gaggggccgc tacccatcgg cgagatcgtg
     4321 cgcttcggcg cccaggtggc cgaagcgctc gcctacgcgc accgcgaagg cgtcctccac
     4381 cgggacgtga cgccgggcaa catcctcatc gccgacgaca acgcgtacgt cgccgacttc
     4441 gggatcgcgc gcatgttcaa cgagaccgcg cgcccgcgta cgacggagtc ggggttcatc
     4501 ctgggcacgc ccacgtacat gagccccgag caggcgagcg gggagctcga gtgcgatggt
     4561 cgcagcgacg tctacagcct ggggtgcgtg ctctacgagg ccaccaccgg cactcctccc
     4621 ttcgtcggcg ccaccttcca ggcggtgatc gccggccggt tcggcgcgcc gccggcgccg
     4681 gtgacggcgg tgcgcaccgg cgtgccgcag gagctggccg acgcgatcgc gcgcgcgatg
     4741 atgacgtcgg cggcggaccg gttccagagc gcggccgagc tcggagcggc gctcgaggcg
     4801 gcgatgccca ccgagatggc gcgcgcccgc gccggtcgcg gccggctccg gcgcgccgcg
     4861 ccggttctgg cggtgctcgt gggagcgctg ctggttgccg gctac
//
LOCUS       DASSYW010000982         3058 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1291848, whole genome shotgun sequence.
ACCESSION   DASSYW010000982 DASSYW010000000
VERSION     DASSYW010000982.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3058)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3058)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3058
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1291848"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..878)
                     /locus_tag="VFN38_15500"
     CDS             complement(<1..878)
                     /locus_tag="VFN38_15500"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HET9013231.1"
                     /translation="MPAPKAASESTSTSSARRLSTLLEISQALSGTLNLKAAMQRVLG
                     TLIRHHSVVRGMVTLLRDGELHAEAMEGFEDRARNTQIKLGEGITGKVVESGKPIVVP
                     RVSKEPAFLNLASRRPDHLKQELSFICVPIVLNRQPVGALGVDLRFKPERDYDSSVKF
                     LGVVSSMIAQALNVQRMVEEERRRLTDENTHLRQELRERYDFSNIIGTSGPTRQMYEQ
                     VAQVAQTNTTVLIRGESGTGKELIAHAIHYNSLRAKKPFIKVSCAALPDTLIESELFG
                     YEKGAFTGAAQRKKGR"
     gene            complement(1008..2396)
                     /gene="hslU"
                     /locus_tag="VFN38_15505"
     CDS             complement(1008..2396)
                     /gene="hslU"
                     /locus_tag="VFN38_15505"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003740291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease ATPase subunit HslU"
                     /protein_id="HET9013232.1"
                     /translation="MPIFLPERSASAVGSLTPRQIVAELDKFVIGQAKAKRAVAIALR
                     NRMRRQRLPADMAEEVTPKNILMIGPTGVGKTEIARRLARLAQSPFIKVEASKFTEVG
                     YVGRDVESMVRDLVQLAVDMVRSEKAEEVKEKARQAAEERLLDLLLPPTRGVAAATAD
                     AAGTPIDPATRSRERLREQLRDHRLDERTVEIEAAQAPMPSFEVVAGSSMEEIGSNLK
                     DMMGSFFQGRSRTRRMKVPEALEYLVGEEQAKLVDMESVGRLAVERVEQNGIIFVDEI
                     DKIASRDGAGHGPDVSREGVQRDILPIVEGTTVSTKFGMVKTDHILFIAAGAFHVSKP
                     SDLIPELQGRFPIRVELEALTRGDFVRILTEPRGALVTQYTALLGAEDVTLTFTPGAV
                     ERIAEFAARVNEVTENIGARRLHTVMERLLDDVSFDAPDLADKTVNIDEAYVERMLAG
                     IVKNEDLSRYIL"
     gene            complement(2402..2929)
                     /gene="hslV"
                     /locus_tag="VFN38_15510"
     CDS             complement(2402..2929)
                     /gene="hslV"
                     /locus_tag="VFN38_15510"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013939585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004298 - threonine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0051603 - proteolysis involved in protein
                     catabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HET9013233.1"
                     /translation="MIHATTILAVRHNGRTVLAGDGQVTFGNTVMKQGARKIRRLHND
                     SILAGFAGSAADAFALFTRFEAKLEQYRGNLERSAVELAKDWRSDRILRRLEAMLIVA
                     DKSSTFLLSGTGDLIEPDDGIVAVGSGGPFALAAARALARHSSLSAREIAEQAMTIAG
                     EICIYTNKTLTVEEL"
BASE COUNT          462 a         1037 c         1006 g          553 t
ORIGIN      
        1 aagcggccct tcttgcgctg ggcggcgccg gtaaacgcac ctttctcgta gccgaagagc
       61 tccgactcga tcaacgtgtc gggcagcgcc gcgcagctca ccttgatgaa cggcttcttc
      121 gcccgcagcg agttgtagtg aatcgcgtgc gcgatgagct ccttgccggt gcccgactcg
      181 ccgcggatga gcacggtggt gttggtctgc gccacctgcg ccacctgctc gtacatctgc
      241 cgcgtggggc cgctcgtgcc gatgatgttc gagaagtcgt agcgctcgcg aagctcctga
      301 cggagatgcg tgttctcgtc ggtcaggcgg cggcgctctt cttcgaccat gcgctgcacg
      361 ttgagcgcct gcgcaatcat cgagctgacg acgcccagga acttcacgct gctgtcgtag
      421 tcccgctccg gcttgaaccg gaggtccacg cccagcgccc ccaccggctg ccggttgagg
      481 acgatcggca cgcagatgaa gctcagctcc tgcttgaggt gatccggccg gcgcgaggcg
      541 aggttgagga acgccggctc cttgctgacg cgcgggacga cgatcggctt gccgctttcc
      601 acgaccttgc cggtaatccc ctcgcccagc ttgatctgcg tgttgcgggc gcggtcctcg
      661 aacccctcca tcgcctcggc gtgcagctcg ccgtcgcgca acagggtgac catgccgcgc
      721 acgacgctgt gatgacggat gagggtgccc aggacccgct gcatcgccgc cttcaggttc
      781 aacgtgcccg acagcgcctg gctgatttcg agcagggtcg agagccggcg ggcgctcgac
      841 gtggacgtgg actctgacgc ggctttcggg gcgggcatag acgcagaacc tccagcgtgc
      901 cggtcaggct ttcgtagatg cagaccttta ggtctgccat cacaaaaacc acaattttgt
      961 agaacgcgcg gaatccgttg acgttcttgt gaccgggtcc tgagattcta caggatgtag
     1021 cgggaaagat cctcgttctt gacgattccg gccaacattc gctccacgta ggcctcgtcg
     1081 atgttcaccg tcttgtccgc gaggtcgggc gcgtcgaacg atacgtcgtc gagcagccgc
     1141 tccatcaccg tgtgcagccg gcgggcgccg atgttctcgg tcacctcgtt gacgcgcgcc
     1201 gcgaactccg caatccgctc cacggcaccc ggcgtgaagg tcagcgtcac gtcctccgcg
     1261 ccgagcagcg ccgtgtattg cgtgacgagc gcgccgcgcg gctcggtgag gatgcgaacg
     1321 aagtcgccgc gcgtcagcgc ttccagctcc acgcgaatcg ggaagcgtcc ctgcagctcc
     1381 ggaatcaggt ccgacggctt cgagacgtgg aacgcaccgg cggcgatgaa gagaatgtga
     1441 tccgtcttca ccatgccgaa cttggtgctg accgtggtgc cctcgacgat cggcaggatg
     1501 tcgcgctgca cgccttcgcg gctcacgtcc gggccgtgcc cggcgccgtc gcggctggcg
     1561 atcttgtcga tctcgtccac gaagatgatg ccgttctgct ccacccgctc cacggccagg
     1621 cggcccacgg actccatgtc cacgagcttg gcctgctctt cccccaccag atactcgagg
     1681 gcttccggca ctttcatgcg ccgggtgcgg ctgcgcccct ggaagaacga ccccatcatg
     1741 tccttcaggt tcgagccgat ctcctccatc gaggagccgg ccacgacctc gaacgacggc
     1801 atgggcgcct gcgccgcctc gatttccacg gtgcgctcgt ccagacggtg gtcgcgcagc
     1861 tgttcgcgca ggcgttcccg cgatcgggtg gccgggtcga tcggcgtccc ggcggcgtcg
     1921 gccgtggcgg cggccacgcc gcgcgtcggc ggcagcagca gatcgagcag ccgttcctcg
     1981 gccgcctgcc gcgccttctc cttcacttcc tcggccttct cggaccgcac catgtccacg
     2041 gccagctgca ccaggtcgcg caccatcgac tccacgtcgc ggccgacgta gccgacctcg
     2101 gtgaacttcg aggcttcgac cttgatgaac ggcgactgtg ccagccgcgc caggcgacgc
     2161 gcgatctcgg tcttgccgac gccggtcgga ccgatcatca ggatgttctt cggcgtcact
     2221 tcttcagcca tgtcggccgg caggcgctgg cggcgcatgc ggttgcgcaa ggcgatggct
     2281 acggcgcgct tcgccttggc ctggccgatc acgaacttgt cgagctcggc gacgatctgc
     2341 cgcggcgtga gcgaccccac ggccgacgcg ctccgctcgg gaagaaagat gggcacgggg
     2401 attacaactc ctcgacggtc agggtcttgt tcgtgtagat gcagatctct ccggcaatgg
     2461 tcatggcctg ctcggctatc tctcgcgcgc tgagcgagct gtggcgcgcg agcgcgcgtg
     2521 ccgcggccag tgcaaagggg ccgccagacc cgacggcgac gatgccgtcg tcgggctcga
     2581 tgagatcccc ggtgccggag agcagaaagg tggatgactt gtctgccacg atgagcatcg
     2641 cctcgaggcg ccgcaggatg cgatcgctgc gccagtcctt ggcgagctcc acggccgatc
     2701 gctcgaggtt gccgcgatac tgttcgagct tcgcctcgaa cctcgtgaag agcgcgaagg
     2761 catcggcggc cgacccggca aaaccggcca ggatcgagtc gttgtgcagg cgccggatct
     2821 tccgcgcgcc ctgcttcatg acggtgttgc cgaaagtgac ctggccgtcg ccggccagca
     2881 ccgtccggcc gttgtggcgc accgccagga tggtggtcgc gtgaatcacc cggccagtat
     2941 ctcgtacgtg gcgggcgact tcgggtgggc gctccggctg tcctgagccg gggtcagccg
     3001 ccaggagccc tcgaggacaa cggcccagtc cgttcgaggc aggggcgcga ttcaggcg
//
LOCUS       DASSYW010000983         2398 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1209606, whole genome shotgun sequence.
ACCESSION   DASSYW010000983 DASSYW010000000
VERSION     DASSYW010000983.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2398)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2398)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2398
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1209606"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..185)
                     /locus_tag="VFN38_15515"
     CDS             complement(<1..185)
                     /locus_tag="VFN38_15515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013234.1"
                     /translation="MGQNGTQAFSPNPASFGGQSVVFKNNDSITHRVVLNDGSVDTGD
                     IAPGATSRAVVMPAAGT"
     gene            complement(466..993)
                     /locus_tag="VFN38_15520"
     CDS             complement(466..993)
                     /locus_tag="VFN38_15520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HET9013235.1"
                     /translation="MRFKLTAYFALLTTLCVIGYIAKVHATSAAGFAGTTLAVGRFGD
                     IDINNHLIPSKPQTVPGPATPWLSFQKTKGLSDVYVQNNVWQPGGTTGWHTHPGHSLI
                     IVTAGAVTAYEGDDPSCTPHTYTVGQGFVDEGGDHVHIIRNEGLVEAKTVAVQLIPAG
                     AMRRIDKPASPDCPF"
     gene            1141..>2398
                     /locus_tag="VFN38_15525"
     CDS             1141..>2398
                     /locus_tag="VFN38_15525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013236.1"
                     /translation="MTEGDRLDSWKEIAAYLKRDVTTVQRWEKREGMPVHRHQHDRMG
                     SVYAFRHELDAWSQQRRSTAEDATDSSADSAVAEWRRPAWVWAAGAIAVLAVAGLAWR
                     GLGSRGPGDVLEGAQFLPLTNSGGISQAAALSRDGRYAAFLSDRDGRMDVWVTQIGTG
                     QFYNRTADAPRELVNAAIRTVGFSPDGSLVTFWVRHTGDTGKASIDVWAAPVLGGAPK
                     PYLDGAAEYDWSADTSQLVYHTPADGDPMFVRRASDAPPGRALYTAPDKKHSHFTTWS
                     PDGAWIYFLQGMPGRMDIWRIRAAGGGAERVTGHDSSVAYPVFVDERTLLYLATDPDG
                     SGPHIYSLDVNERRPRRLTSGVDTYTSLSASADGSRLVATLARPTGTLWRLPIDAGIA
                     GPERAQRIALTTGTGVAPRLGPDYLLY"
BASE COUNT          359 a          815 c          849 g          375 t
ORIGIN      
        1 ttcgtgccgg cggcgggcat caccacggcg cggctcgtcg cacccggcgc gatgtcgcct
       61 gtatccaccg agccgtcgtt gagcacgacg cggtgcgtga tggagtcgtt gttcttgaac
      121 acgaccgact gcccgccgaa cgacgcggga ttcggtgaga aggcttgcgt gccgttctgt
      181 cccatgatgg tgatagtcgt agcgctggtg ctgccgccgc caccgcctga cggtgaggtt
      241 ggtgtagaac cgccgtagcc gctgccaccg cagctcacac agacgaggcc cgccagagac
      301 gcgagcgccc acacacggag tcgcattgat tcatcctcgc agtccccgcc caccattcgc
      361 ggtgcaaggg cgaggccagc gaggacgccg gtcgacggcc gcgattgcgc gcccgcgacc
      421 ggcgtgtttt acgcgccggg taaagcgctt acccgcgacg ggcgctcaga acgggcagtc
      481 gggcgaggcc ggcttgtcga tgcggcgcat cgcacccgcc ggtatgagct gcaccgcgac
      541 ggtcttcgcc tcgacgagcc cttcgtttcg aatgatgtgg acgtgatcgc cgccctcgtc
      601 cacgaacccc tggccgacgg tgtacgtgtg cggcgtgcag gaggggtcgt caccttcata
      661 ggccgtcacc gcgccggcgg tcacgatgat caggctgtgg cccggatgcg tgtgccagcc
      721 ggtggtcccg cccggctgcc agacgttgtt ctgcacgtac acgtccgaga gccctttggt
      781 cttctgaaac gacaaccacg gtgtggccgg cccggggacg gtttgcggct tcgacggaat
      841 cagatggttg ttgatgtcga tgtcgccgaa ccggcccacg gccagcgtgg tcccggcaaa
      901 gccggcggcg gacgtggcgt gcaccttggc gatatagccg atgacgcaca gcgtggtcag
      961 cagcgcgaag tacgcagtga gcttgaatcg catctcaatc tcccttgaaa ggctccgtgc
     1021 ggagcgtggg gagcacggta gggaccggcg ccggcctgct caagcagcaa gccacggcag
     1081 cggcgcattt tcagcgcagc gccgtggaat gcggcggttt gccgtggcac actccctgcg
     1141 atgaccgagg gcgaccgcct cgattcgtgg aaggaaatag cggcctacct gaagcgcgac
     1201 gtcaccaccg ttcagcgctg ggagaagcgg gaggggatgc ccgtgcaccg ccaccagcac
     1261 gatcggatgg gctcggtgta cgccttccgt cacgagctgg acgcctggtc gcagcagcgc
     1321 cgttcgaccg ctgaggacgc cacggactcg tccgctgact cagccgttgc tgagtggcgg
     1381 cggccggcgt gggtctgggc ggcgggcgcg atcgcggtgc tcgccgtggc cggcctcgcc
     1441 tggcgcggcc tgggcagtcg cggaccgggc gacgtgctcg aaggcgcgca gttcctgccg
     1501 ctgaccaact cgggcggcat ctcgcaagcg gcggcgctct cgcgcgacgg ccgctatgcg
     1561 gcgttcctct ccgaccgcga tggccgcatg gacgtgtggg tcacgcagat cggcacgggt
     1621 cagttctaca accgcacggc ggacgcgccc cgcgagctgg tgaacgcggc catccgtacc
     1681 gtcggcttct cgcccgacgg gagcctggtg acgttctggg tgcggcacac cggcgacacc
     1741 gggaaggcgt cgatcgacgt gtgggccgcg ccggtgctgg gcggcgcacc gaagccgtac
     1801 ctcgacgggg ccgccgagta cgactggtcg gccgacacat cgcagctcgt gtaccacacg
     1861 ccggccgacg gcgatcccat gttcgtgcgg cgggccagcg acgcgccgcc gggacgcgcg
     1921 ctctacacgg cgcccgacaa gaagcacagt cacttcacga cgtggtctcc cgacggcgcc
     1981 tggatctact tcctgcaggg gatgccggga cggatggaca tctggcgcat ccgcgcggcg
     2041 ggtggcggcg cggagcgcgt gaccgggcac gacagcagcg ttgcctatcc ggtgttcgtc
     2101 gacgagcgca cgctgctgta tctggccacg gacccggacg gatcgggccc gcacatctac
     2161 agcctcgacg tcaacgagcg gcggcctcgc cgtctcacgt ccggcgtcga tacgtacacg
     2221 tcgctctcgg ccagcgcgga cgggtcgcgt ctggtcgcca cgctggcacg gccgaccggg
     2281 acgctctgga ggcttccgat cgacgccggc atcgcgggtc ccgagcgcgc gcagcgcatc
     2341 gcgctgacca ccggcacggg cgtggcgcct cgcctgggcc ccgactatct cctctatg
//
LOCUS       DASSYW010000984         2013 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1446959, whole genome shotgun sequence.
ACCESSION   DASSYW010000984 DASSYW010000000
VERSION     DASSYW010000984.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2013)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2013)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2013
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1446959"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..629)
                     /locus_tag="VFN38_15530"
     CDS             complement(<1..629)
                     /locus_tag="VFN38_15530"
                     /inference="COORDINATES: protein motif:HMM:NF014386.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HET9013237.1"
                     /translation="MDLAEWPVVLILAGLTAYTVLGGADFGAGLWHMLLPGERRRPLR
                     DHTYHAMGPVWEANHVWLIFVLVVAWTAYPSAFGSIFSTLYVPLFLAAVGIILRGTMY
                     ALRSQVTGGRDELVVGLIFGVSSVLTPFALGAAVGGIASGRVPVGNAAGEPFGSWLNP
                     TSLTVGALAVVTSAYLAAVWLTADGARVGRDDLVGPFRNRALVTGALAGA"
     gene            complement(616..1983)
                     /locus_tag="VFN38_15535"
     CDS             complement(616..1983)
                     /locus_tag="VFN38_15535"
                     /inference="COORDINATES: protein motif:HMM:NF013791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0070069 - cytochrome complex [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0019646 - aerobic electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HET9013238.1"
                     /translation="MGGSAGHLLASALPPIEQHHLDQARQMQALSFAVHIPLVCFGVA
                     FPALVVFVEWLARRRGDSVLLALARRWSKALIALFAIGVVTGTILSFELGLLWPEFMA
                     TYGGVFGLAFALEGFSFFTEAIFIAIYVYGWDRLSPRMHMLSGIPVVIAGFTGSLTVL
                     TVNAWMNNPTGFRLEDGRAVDVHPWEALFGNGYFWHELVHMYLAAYIVAGFVTAAVYA
                     AAWLRGRRDRYVRVALALPLTIAAIAAPAQVIVGDWAAREVAREQPVKLAAFEGLSET
                     QRGAPIHLGGWYDAKTGEVKYGVKIPKLLSLLAFHDPNAKVRGLNEVPPADRPPVNVV
                     RFAFATMVGIGTLMAAFAVVYLVLWRRRRALPESRWFMWAVVALGPLSVVALIAGWIT
                     TEVGRQPWVVYGFMRTEQAVTGAGGIVVGYVTLVLVYAALGAATVWVLRRIARKPAEV
                     SDGSG"
BASE COUNT          343 a          768 c          686 g          216 t
ORIGIN      
        1 gcgccggcca gggcgcccgt gacgagcgcg cgattccgga acggcccgac gaggtcgtcg
       61 cgccccactc gcgcgccgtc cgcggtgagc cagacggcgg cgaggtacgc gctcgtgacc
      121 acggcgagcg cccccacagt caacgaagtc gggttgagcc aggagccgaa cggctcaccc
      181 gcggcgttgc ccaccgggac gcgcccggag gcgatgccgc ccaccgccgc gccgagcgcg
      241 aacggcgtga gcaccgacga gacgccgaag atgagcccca ccaccagctc gtcgcgcccg
      301 cccgtcacct ggctgcgcag cgcgtacatc gtgccgcgca ggatgatccc caccgccgcc
      361 aggaacagcg gcacgtagag ggtggagaag atcgacccga acgcgctcgg gtaggccgtc
      421 caggccacca cgagcacgaa gatgagccac acgtggttcg cctcccacac aggccccatc
      481 gcgtggtagg tgtggtcgcg cagcggccgc cgccgctcgc ccggcagcag catgtgccac
      541 aggcccgccc cgaagtcggc gccgccgagc accgtgtagg ccgtgaggcc ggcgaggatc
      601 aggacgaccg gccactcagc cagatccatc gctcacctcc gccggtttgc gcgcgatccg
      661 gcgcagcacc cataccgtgg ccgcgcccag ggcggcatag acgagcacca gcgtcacgta
      721 gcccaccacg atcccgccgg cgcccgtcac cgcctgctcc gttcgcatga agccgtagac
      781 cacccacggc tggcggccca cctcggtggt gatccagccg gcgatgagcg cgaccaccga
      841 cagcgggccg agcgccacca ccgcccacat gaaccagcgc gactcgggca gcgcgcggcg
      901 gcggcgccac agcaccaggt agacgacggc gaacgcggcc atcagcgtgc cgatgcccac
      961 catcgtcgcg aacgcgaagc gcacgacgtt caccggcggc cggtcggcgg gcggcacctc
     1021 gttcagcccg cgcaccttcg cgttcgggtc gtggaacgcg agcagcgaga gcagcttcgg
     1081 gatcttcacg ccgtacttca cctcgccggt cttggcgtcg taccagccgc cgaggtggat
     1141 cggcgcgccg cgctgggtct cgctcaggcc ctcgaacgcg gcgagcttca ccggctgctc
     1201 gcgcgccacc tcgcgcgcgg cccagtcccc cacgatcacc tgcgcgggcg cggcgatggc
     1261 ggcgatcgtg agcggcagcg ccagcgccac gcgcacgtag cggtcgcgcc tcccgcgcag
     1321 ccacgccgcc gcgtagacgg ccgccgtcac gaagccggcc acgatgtacg ccgccaggta
     1381 catgtgcacg agctcgtgcc agaagtagcc gttgccgaag agcgcctccc acgggtgcac
     1441 gtccaccgcg cgcccgtcct cgaggcggaa gcccgtgggg ttgttcatcc acgcgttcac
     1501 cgtcagcacc gtgagtgagc cggtgaagcc ggcgatcacc accgggatgc ccgagagcat
     1561 gtgcatccgc ggcgagagcc ggtcccagcc gtacacgtag atcgcgatga agatcgcctc
     1621 ggtgaagaac gagaagccct cgagcgcgaa cgcgagcccg aacaccccgc cgtaggtggc
     1681 catgaactcc ggccacagca ggccgagctc gaacgacagg atcgtgccgg tcacgacgcc
     1741 gatggcgaac agcgcgatga gcgccttcga ccagcgcctg gcgagcgcca gcagcaccga
     1801 gtcgccgcgc cggcgcgcga gccactcgac gaacaccacg agcgcgggga acgcgacgcc
     1861 gaagcacacc agcgggatgt gcaccgcgaa cgagagcgcc tgcatctgcc gggcctggtc
     1921 gaggtggtgc tgctcgatcg ggggcagggc ggaggcgagc aggtggccgg cggagcctcc
     1981 cacgcctccg tgctacccgc tcggccgcct cac
//
LOCUS       DASSYW010000985         2441 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1115385, whole genome shotgun sequence.
ACCESSION   DASSYW010000985 DASSYW010000000
VERSION     DASSYW010000985.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2441)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2441)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2441
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1115385"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..299)
                     /locus_tag="VFN38_15540"
     CDS             complement(<1..299)
                     /locus_tag="VFN38_15540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013239.1"
                     /translation="MTSIAEASASRLVATAVALGATVRLAFLRRLAVRFIGVALAASL
                     ALRLLRLGLLGRLRRALCLRLGLLARLRLRLRRRRTRLGLLLPLRLALLGLGRRRG"
     gene            444..857
                     /locus_tag="VFN38_15545"
     CDS             444..857
                     /locus_tag="VFN38_15545"
                     /inference="COORDINATES: protein motif:HMM:NF015567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1902495 - transmembrane transporter
                     complex [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HET9013240.1"
                     /translation="MIGILIVAHDTLSESLARAVTHVLGTRPAQFETMSVKGTDDPLD
                     LLPAARGALERLDTGEGVLVFTDIFGATPANLANKLLAPGRIEGIAGVNLPMLVRAFT
                     YRSKGMDTLIRKAVSGGCEGVVHIAIDPAYASTRA"
     gene            862..1107
                     /locus_tag="VFN38_15550"
     CDS             862..1107
                     /locus_tag="VFN38_15550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HPr family phosphocarrier protein"
                     /protein_id="HET9013241.1"
                     /translation="MNKLGLHARASAKLTQVASRFQSDVHIARNGRRVNAKSIMGVMM
                     LAAGKGSKVTLETSGPDEDEAMNALCALVADCFGEGQ"
     gene            1300..1566
                     /locus_tag="VFN38_15555"
     CDS             1300..1566
                     /locus_tag="VFN38_15555"
                     /inference="COORDINATES: protein motif:HMM:TIGR01003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HPr family phosphocarrier protein"
                     /protein_id="HET9013242.1"
                     /translation="MQVREIRLRHTNGLHARVAARVVKVAGRFRSRIVLCCGERRASA
                     RSIMAVMMLAAAFGATVRLEIEGPDEQAAVEAMSAVLVAPGERR"
     gene            1658..>2441
                     /locus_tag="VFN38_15560"
     CDS             1658..>2441
                     /locus_tag="VFN38_15560"
                     /inference="COORDINATES: protein motif:HMM:NF017346.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate-utilizing N-terminal
                     domain-containing protein"
                     /protein_id="HET9013243.1"
                     /translation="MITFALHGIGVSGGIAIGRAQLVSHATLEVAHYTVPATRVDQEI
                     ARLDFAIDEVQKELTALHNTMMRSGEVPGEFGAFLDVHWMILNDPTLAEAPKRIIAEQ
                     RCNAEWALTQQMNVLIDQFDQIEDTYLRERKADVVQVVERVLKRLMGKPGSLPSAIAE
                     ERTILVAHDLSPADVIQFKQHHFAAFLTDLGGVTSHTAIVARSLAVPAVVATHNARQM
                     IRDGEMLIVDGSNHVVIVNPDRAVLAEYRLKQSEFDLERQKLK"
BASE COUNT          398 a          864 c          859 g          320 t
ORIGIN      
        1 cctcgccgcc gccccaggcc cagcagcgcg agccggagcg gcagcagcag gcccagccgc
       61 gtgcgacgcc tccgcagccg caggcgcagc ctcgccagca acccgagccg caggcacagc
      121 gcgcgcctca gcctgcccag cagaccgagc cgcagcaggc gcagggcaag ggacgcggca
      181 agggcgacac cgataaatcg gacggcaaga cgccggagga acgcgaggcg gaccgtcgcg
      241 ccgagcgcga ccgcggtcgc gacaagccgg gaggctgacg cttcggcaat cgacgtcacc
      301 gtcgtgggta tgcgaaggcc ggcgcttgcc ggccttcgcg ctttcggagg cgctcgcact
      361 gcgcggcacg gacgtccccg ctggggccgc gtgctaccat cggcgagcgc cgtcgcgtgc
      421 ggaggagcgc gcgagccgcc tccatgatcg gcatcctgat cgtcgcccac gacacgcttt
      481 ccgagagcct cgcgcgcgcg gtgacgcacg tgctcggcac gcggccggcg cagttcgaga
      541 cgatgtcggt caagggaacc gacgatccgc tcgacctcct gcccgcggcg cgcggcgcgc
      601 tcgagcgcct ggacaccggc gaaggcgtgc tggtgttcac ggacatcttc ggcgccactc
      661 cggcgaacct cgcgaacaag ctgctcgcgc ccgggcgcat cgaagggatc gcgggcgtca
      721 acctcccgat gctcgtccgc gcattcacct atcgctcgaa gggcatggac acgctgatcc
      781 gcaaggcggt ctcgggcggc tgcgagggcg tcgtgcacat cgcgatcgac ccggcctatg
      841 cctcaacgcg agcttgagat cgtgaacaag ctcgggctcc atgcccgcgc gtccgcgaag
      901 ctgacgcagg tggcctcgcg cttccagagc gacgtccaca tcgcgcggaa cggccgccgc
      961 gtgaacgcca agagcatcat gggcgtgatg atgctggccg ccggcaaggg atcgaaggtc
     1021 acgctggaga cgtcgggccc cgacgaggac gaggcgatga atgcgctgtg cgcgctcgtc
     1081 gccgactgct tcggcgaagg acagtgaacg ctcacgtcgg cggttcgacg gggcgcgcct
     1141 ccccggctcc gcgcgtcggc gccggcctct tccgctgtca ggcaggcgac cacgaaatgt
     1201 catcgtcatg gaacccttcg gcgccaggat ggatcaataa ggggatcgcg gtccgttccg
     1261 ggccggggtg ccctgtccat tcgagcgagg agagtcccga tgcaagttcg cgagatcagg
     1321 ctgcgccaca ccaacgggtt gcatgcgcgc gtcgccgcgc gcgtggtcaa ggtcgcgggc
     1381 cggttccgga gccggatcgt gctgtgctgc ggcgagcggc gcgccagcgc acgcagcatc
     1441 atggcggtga tgatgctggc cgcggcgttc ggcgcgacgg tgcgactgga gatcgagggg
     1501 cccgacgagc aggcggcggt cgaggcgatg tcggcggtgc tggtcgcgcc cggcgagcgg
     1561 aggtgacgcc cgggcgaccg acgcctcccc ttcgatcccc ggtacgaccc cggtaccgcc
     1621 cggtacccag gacctgccgc ggacctgggg tcgcgcggtg atcacgttcg cgctccacgg
     1681 catcggcgtc tccggcggca tcgcgatcgg ccgcgcgcag ctcgtctcgc acgccacgct
     1741 cgaggtcgcg cactacacgg tccccgcgac gcgcgtcgac caggagatcg cgcgcctcga
     1801 cttcgccatc gacgaagtcc agaaggagct gaccgcgctg cacaacacga tgatgcggtc
     1861 cggcgaggtg cccggcgagt tcggcgcgtt cctcgacgtc cactggatga tcctgaacga
     1921 cccgacgctg gccgaggcgc ccaagcgcat catcgccgag cagcgctgca atgccgagtg
     1981 ggcgctcacg cagcagatga acgtcctgat cgaccagttc gaccagatcg aggacaccta
     2041 cctgcgcgag cgcaaggccg acgtcgtgca ggtggtcgag cgcgtgctga agcgcctgat
     2101 gggcaagccc ggatcgctgc cgagcgcgat cgccgaggag cgcacgatcc tcgtcgcgca
     2161 cgacctgtcg ccggccgacg tcatccagtt caagcaacac cacttcgccg cgttcctcac
     2221 cgacctgggc ggcgtgacct cgcacacggc gatcgtggcg cggagcctcg cggtgcccgc
     2281 ggtcgtcgcc acgcacaacg cgcggcagat gatccgcgac ggcgagatgc tgatcgtcga
     2341 cggcagcaac cacgtcgtca tcgtcaaccc ggaccgcgcg gtgctcgccg agtaccggct
     2401 gaagcagagc gagttcgacc tcgagcggca gaagctcaag c
//
LOCUS       DASSYW010000986         2266 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_931342, whole genome shotgun sequence.
ACCESSION   DASSYW010000986 DASSYW010000000
VERSION     DASSYW010000986.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2266)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2266)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2266
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_931342"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1067
                     /locus_tag="VFN38_15565"
     CDS             <1..1067
                     /locus_tag="VFN38_15565"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HET9013244.1"
                     /translation="VLGANASFIGAIEGAAESTAALLKLASGWWSDRVRKRKPLVVIG
                     YGIASLMRPLVAIAQTASQVLAIRVADRVGKGIRNAPRDALIAESVDPSIRGKAFGFH
                     RAADHAGGVLGPLIAFTVLTYHWAPIRKVFLLAAIPGALSFLVLVMFVREIERPADAP
                     AGSGPDLTLPLGSRFWRVLGVIFLFTLGNSTDAFLLLRANQLGVAVALAPILWAALHV
                     VKSLSSTPGGALSDRIGRRPTLIMGWALYAAVYFGFAHATRAWQAWALFGVYGIFFGL
                     TEGSERALVADLVIPERRGTAFGWYNLAIGLGALPASLLFGYVWDHAGASTAFLMGAS
                     LALAAALGMLFVVPRRTVAA"
     gene            1064..2032
                     /locus_tag="VFN38_15570"
     CDS             1064..2032
                     /locus_tag="VFN38_15570"
                     /inference="COORDINATES: protein motif:HMM:NF015587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HET9013245.1"
                     /translation="MTPEEAAKQEKEVGPAARKGILAHARGFLGLLWSAIYKFFSDSC
                     STMAAALSFYTFFSLPALLTLLIMLVGRVMDPTQVQKAIIEQVGVLIGSAGSEQVGAI
                     ISHAKRGDGPASLATLLSILALAFGATTTFAQLQDALNRIWSVKPDPRRNQLRVFLAK
                     RIFSFGIVVTVSFLLLVSLVLSTALAAAASRVTTLMGTPPIVLQVATSTVGFVVITAL
                     FAVMYRYLPDARIAWRDVGAGALGSALLFVLGKTVIGLYLGGANPGSAYGAAGSLAVV
                     LIWVYYTSMVLLFGAEFTELWAERYGRGVVPERGAIAYEEQEKVVR"
BASE COUNT          291 a          754 c          815 g          406 t
ORIGIN      
        1 ccgtcctcgg cgcgaacgcg agcttcatcg gcgccatcga gggcgccgcc gaatcgaccg
       61 cggccctgct caagctggcg agcggctggt ggtccgaccg cgtgcggaag cgcaagccgc
      121 tggtggtgat cggttacggc atcgcgtcgc tgatgcggcc gctcgtcgcg atcgcgcaga
      181 cggcgtcgca ggtgctggcg atccgcgtcg ccgatcgggt ggggaagggg atccgcaacg
      241 cgccgcgcga cgcgctgatc gccgaatcgg tggatcccag cattcgcggc aaggcgttcg
      301 gcttccaccg cgcagcggat cacgcgggcg gcgtgctcgg accgctgatc gccttcaccg
      361 tgctgacgta ccactgggcg ccgatccgga aggtcttcct cctggcggcc atcccgggcg
      421 cgctctcctt tctcgtgctc gtgatgttcg tgcgcgagat cgagcgcccg gccgatgcgc
      481 ccgcgggctc gggacccgat ctcaccctgc cgctcgggag ccggttctgg cgcgtgctcg
      541 gcgtgatctt cctgttcacc ctcggcaact ccaccgacgc cttcctgctg ctgcgcgcga
      601 accagctcgg cgtcgccgtc gcgctggcgc cgatcctgtg ggcggcgctg cacgtggtga
      661 agtcgctctc cagcacgccg ggcggtgcgc tgtcggaccg catcggccgg cgccccacgc
      721 tgatcatggg ctgggcgctc tatgccgcgg tctacttcgg cttcgcccac gcgacgcggg
      781 cgtggcaggc gtgggcgctg ttcggcgtgt acggaatctt cttcgggctc accgaggggt
      841 ccgagcgcgc gctcgtcgcc gacctcgtga ttcccgagcg gcgcggcacg gcgttcggct
      901 ggtacaacct ggcgatcggg ctcggtgcgc tgcccgcgtc actgctgttc gggtacgtgt
      961 gggatcacgc gggcgcgagc accgcgttcc tcatgggcgc ctcgcttgcg ctcgccgcgg
     1021 cgctggggat gctgttcgtc gtaccgcgcc gcacggtggc ggcatgacgc ccgaggaggc
     1081 ggcgaaacag gagaaggagg tgggtcccgc cgcgaggaag gggattctcg cgcacgcgcg
     1141 cggctttctc gggctgctct ggtcggcgat ctacaagttc ttcagcgaca gctgctcgac
     1201 catggcagcg gcgctgtcgt tctacacctt cttctcgcta cccgcgctcc tcacgctgct
     1261 catcatgctc gtcgggcggg tgatggaccc gacgcaggtg cagaaggcga tcatcgagca
     1321 ggtcggcgtg ttgatcggct cggccggatc ggagcaggtg ggggcgatca tcagccacgc
     1381 gaagcgcggc gacgggccgg cgtcgctggc gacgctgttg agcatccttg cgctggcgtt
     1441 cggcgcgacg acgaccttcg cgcagctcca ggacgcgctg aacaggatct ggagcgtgaa
     1501 gcccgatccg cggcggaacc agctccgcgt gttcctcgcc aagcggatct tctcgttcgg
     1561 catcgtggtc acggtgtcgt tcctgctgct cgtctcgctc gtgctcagca cggcgctggc
     1621 agcggcggcg tcccgcgtca cgaccctcat gggcacgcca cccatcgtgc tgcaggtcgc
     1681 gacgtcgacg gtgggcttcg tcgtcatcac ggcgctcttc gccgtcatgt accgctatct
     1741 gccggatgca cggatcgcgt ggcgcgacgt cggcgccggc gcactcggca gcgcgctgct
     1801 gttcgtgctc ggcaagacgg tgatcgggct ctacctcggc ggcgcgaacc cgggcagcgc
     1861 gtatggcgcc gcaggctcgc tcgcggtcgt gctgatctgg gtctactaca cgtcgatggt
     1921 gctgctcttc ggcgccgagt tcaccgagct gtgggcggag cggtacgggc ggggggtggt
     1981 accggagcgc ggggcgatcg cgtacgagga gcaggagaag gtggttcgtt gatcggagcg
     2041 cactgaagta cgacggtgcc tggtaccggg tacacggacc gacgtgcgag ccaatccaaa
     2101 gtgcggacgc tacgctgtgg ccggcggctg aaaccaccct cgcctggcgc gatcgcattc
     2161 ggatgcccag catcggtgaa ggctggttca cgaggctccg aattagcggg gccagtatgc
     2221 cagtccttct acctggtacg aggtaccgcg tacttcactt ggcggt
//
LOCUS       DASSYW010000987         2450 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1189089, whole genome shotgun sequence.
ACCESSION   DASSYW010000987 DASSYW010000000
VERSION     DASSYW010000987.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2450)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2450)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2450
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1189089"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1996)
                     /gene="recG"
                     /locus_tag="VFN38_15575"
     CDS             complement(<1..1996)
                     /gene="recG"
                     /locus_tag="VFN38_15575"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: protein motif:HMM:NF008168.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HET9013246.1"
                     /translation="MTRDAPRQQRLRLDTPVTYLKGVGPARAEALRRLGIVTAGDLLY
                     HIPHRYEDASTVASISSLEPGMQGTVIGRVVSKGVLPTRKGLRIFQAVLRDDSGMIEV
                     SWPGQPYLDRTIAKDDVLLVSGSVRFFHGRQLQPREFVNLGDEDAGTAQGRVLSVYPA
                     TEGLSFKVIRGIIDAHLDALLPLVTEYLPREVRAAAAVPAIGDALRMVHRPTSLGEAL
                     EGRARLAFEELLFVQLLQQRAKALAREIRRGIHFENRRELTTRLREALPFQLTGAQGR
                     VLREIFADMCSERRMQRLLQGDVGSGKTIVALFSALLAMENGYQAAVMAPTELLAEQH
                     LRSMTRLLEPLGIAPLLVTGSLKARARRELATRLAQPEPALVVGTHALVQEATAFARL
                     GLAVVDEQHRFGVEQRKALGAKGEAPDVLLMTATPIPRSLALTLYGDLDLSILDERPP
                     GRLPITTALRPEAARERVLQFVDRELAKGRQAYVVYPVIEESEKSDLKAATTMFEILS
                     AGPFADRSSALLHGRLPADEKDAIMRRFRDGKIDLLVATTVIEVGIDVPNATVMLIEH
                     PERFGLSQLHQLRGRVGRGAEASYCILLGDVSPDTKQRLDVFTGSEDGFEIARADLQL
                     RGMGDLFGERQSGVPTFRVADPIRDEILSDQASAAAARVLE"
     gene            complement(1993..>2450)
                     /locus_tag="VFN38_15580"
     CDS             complement(1993..>2450)
                     /locus_tag="VFN38_15580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HET9013247.1"
                     /translation="RTGAEFIGGNTGADPAAVAFDAIDAAVARGVDVLIVDTAGRLHT
                     SEGLMTELKKVARVIAKRLPDAPHETLLVLDGTIGQNAVQQAKIFAAAVPVSGLVVTK
                     LDGTAKGGVVVAVHEAVDMPVKFVGVGEQRDDLLPFDAGVFAGELLGVE"
BASE COUNT          336 a          881 c          883 g          350 t
ORIGIN      
        1 cctccagcac ccgcgccgcc gcggcgctcg cctggtcgct caggatctcg tcgcggatcg
       61 gatcggcgac gcggaaggtg ggaacgccgc tctgccgctc gccgaacagg tcgcccatcc
      121 cccgcagctg gaggtcggcg cgcgcgatct cgaacccgtc ctcgctgccg gtgaacacgt
      181 cgagccgctg cttcgtgtcg gggctcacgt cgccgagcag gatgcagtac gacgcctccg
      241 ccccccgccc gacgcggccg cgaagctgat gcagctgcga cagcccgaac cgctcggggt
      301 gctcgatcag catcacggtg gcattcggga cgtcgatccc cacctcgatc accgtcgtgg
      361 cgacgagcag gtcgatcttc ccgtcgcgga agcgccgcat gatggcgtcc ttctcgtcgg
      421 cggggaggcg cccgtgcagc agcgcggacg accggtcggc gaaggggccg gcggacagga
      481 tctcgaacat cgtcgtcgcg gccttgaggt cggacttttc cgactcctcg atcaccgggt
      541 agacgacgta ggcctgccgg cccttcgcga gctcgcggtc cacgaactgg agcacgcgct
      601 cgcgggctgc ctccgggcgc agggccgtgg tgatgggcag tcgtcccggc gggcgctcgt
      661 cgaggatgga gagatccagg tcgccgtaca gggtgagggc gagcgatcgg gggatggggg
      721 tggcggtcat gagcagcacg tcgggcgcct cccccttggc gcccagcgcc ttgcgctgct
      781 ccacgccgaa gcgatgctgc tcgtccacca cggcgaggcc cagccgcgcg aaggcggtgg
      841 cctcctgcac cagcgcgtgc gtgccgacga cgagcgccgg ctcgggctgc gcgaggcgcg
      901 tggcgagctc gcggcgcgcc cgcgccttga ggctcccggt gacgagcagc ggcgcgatgc
      961 cgaggggctc gagcagcctg gtcatggaac gcaggtgctg ctccgccagc agctcggtgg
     1021 gcgccatcac ggcggcctga tagccgttct ccatggcgag gagggcgctg aagagggcga
     1081 cgatggtctt tccgctgccg acgtcgccct ggagcagccg ctgcatgcgc cgctcgctgc
     1141 acatgtcggc gaagatctcg cgcagcacgc gcccctgcgc gccggtgagc tggaagggca
     1201 gcgcttcgcg cagccgggtg gtgagctccc gcctgttctc gaaatggatg ccccggcgga
     1261 tctcgcgcgc cagcgccttg gcgcgctgct ggaggagctg cacgaacagc agctcctcga
     1321 acgcgagccg cgcgcgcccc tcgagcgcct cgccgagcga ggttgggcgg tggaccattc
     1381 gcagggcgtc gccgatggcc ggcacggcgg ccgcggcgcg cacctcgcgc gggaggtact
     1441 cggtgacgag ggggagcagc gcgtcgagat gcgcgtcgat gatcccgcgg atcaccttga
     1501 acgacagccc ctcggtggcc gggtacaccg acagcacccg gccctgcgcg gtgccggcgt
     1561 cctcgtcgcc gaggttcacg aactcgcgcg gctggagctg gcgaccgtgg aagaaccgca
     1621 cgctgccgct caccagcagc acgtcgtcct tggcgatggt gcgatcgaga tacggctggc
     1681 cgggccacga gacctcgatc atcccgctgt cgtcgcgcag cacggcctgg aagattcgca
     1741 gccctttccg cgtcggcagc acccccttgg acacgacgcg gccgatgacc gtgccctgca
     1801 tccccggctc gagcgacgag atggacgcca cggtgctggc gtcctcgtac cggtgcggga
     1861 tgtgatagag caggtcgccg gcggtgacga tccccagccg gcgcagcgcc tcggcccgcg
     1921 ccggccccac tcccttgagg taggtgacgg gggtatcgag ccgcagtcgc tgctgccggg
     1981 gcgcgtcgcg cgtcactcga cgcccagcag ctccccggcg aacacgcccg cgtcgaaggg
     2041 gagcaggtcg tcgcgctgct cgcccactcc gacgaacttc acgggcatgt ccaccgcttc
     2101 gtgcacggcc acgacgaccc cgcccttggc cgtgccgtcg agcttcgtca ccaccagccc
     2161 gctcaccgga acggccgcgg cgaagatctt cgcctgctgc acggcgttct ggccgatggt
     2221 gccgtcgagc acgaggagcg tctcgtgcgg cgcgtcgggc aggcgcttgg cgatcacgcg
     2281 cgccaccttc ttcaactcgg tcatcagccc ctcgctagtg tgcagccggc cggcggtgtc
     2341 gacgatgagc acgtccacgc cgcgcgcgac cgcggcgtcg atggcgtcga aggccacggc
     2401 ggcggggtcg gcgccggtgt tgccgccgat gaactccgcc ccggtacgct
//
LOCUS       DASSYW010000988         3686 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1277409, whole genome shotgun sequence.
ACCESSION   DASSYW010000988 DASSYW010000000
VERSION     DASSYW010000988.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3686)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3686)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3686
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1277409"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..411
                     /locus_tag="VFN38_15585"
     CDS             <1..411
                     /locus_tag="VFN38_15585"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013756.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HET9013248.1"
                     /translation="RPDGHPCGLVATSVSSFSAQPPTVLASVSHTSRCHEALAGGAEF
                     GVHLLTAEQEPLARIFAGLGDDKFAGVEWDWDGELVPRIGGSLAYLRCRRAALFELYD
                     HSLLVGDVIGGDVRDGEPLVYMERSMDWRLTPAS"
     gene            440..1525
                     /locus_tag="VFN38_15590"
     CDS             440..1525
                     /locus_tag="VFN38_15590"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HET9013249.1"
                     /translation="MSAGAVAKAILVAAGVVAGLYVLYRIRAVIGLLVIAVFIAVALG
                     PAVDWFERRGVRRRGLAILTTYLWLFFAVLVVGLAVVPPIVDQTDDFARNVPSYVDDL
                     SKNETVRDYDKRYGISKELRAQAERLPTRLDDAASALQAVTVGVFSTLVQLITVLVMA
                     FFLLLEGKSITAWLFGELGPARGPRWRNVADDVYRSVGGYVVGNLGISLVAGLSTYVV
                     LTVLGVRFAVPLAVLMAFFDLIPLVGATIAAILIGIVTAIEDFPTAMLVWIAFAILYQ
                     QFENNLLQPFVYRRTVALHPLLVIVAILIGANLLGVLGALLAIPIAGAAQIVVKDWWA
                     VRKQQPSPLLTEPQPPAAGGGLPEPAS"
     gene            1820..2533
                     /locus_tag="VFN38_15595"
     CDS             1820..2533
                     /locus_tag="VFN38_15595"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SigB/SigF/SigG family RNA polymerase sigma
                     factor"
                     /protein_id="HET9013250.1"
                     /translation="MTRYHHQGDLSARDELVERFLPLARQLARRYQRGNEPLDDLVQV
                     ACIGLVKAVDRFDPDRGTAFSSYAVPTILGELKRYFRDAGWAVHVPRGMQERVMSVNQ
                     AVTRLSRDLGRAPTPQEIADSIGEEVELVLEALEAAIAYDSVSLDTPRSSNEDGGDTY
                     ADTVGAVDERYELVEYTTAIAPTVRALPERDRLVLKLRFEDDLTQLEIAERIGVSQMH
                     VSRLIRRALARLRTVADAQ"
     gene            2558..>3686
                     /locus_tag="VFN38_15600"
     CDS             2558..>3686
                     /locus_tag="VFN38_15600"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HET9013251.1"
                     /translation="MPRRVALLVSAVALVDTMFFAAIAPLVPFYTDELGLSKSAAGIL
                     VGAYPAGSVLGSLPAGWLAARAGTKPTTLLGLAIMAATSVVFGFAHHIAVLDVSRFVQ
                     GLGGACMWSGGLGWLVGVTPRARRGEAIGVVVGTAVFGALLGPVLGGIATALGTGPVF
                     TGVGVVAVVLFVLALGTHEVAEAVPVTIAAAKRVARDPRVIGGFWLVLLPALTFGVLE
                     VLGPLRIDDLGGGAGVVAAAFLLSAGAEAALAPIAGRLSDRRGRRLPLQLGLAGTVVF
                     GIVLPLPEEAWLVVVAIVLAGPVFGLMYTPAMALLSDGAEAAGLDQGAAAAVISLAWA
                     IGQVIGSAAGARTAEAAGDAVPYGLVSALALFTLAVWRFRAP"
BASE COUNT          423 a         1334 c         1329 g          600 t
ORIGIN      
        1 cgcccggacg ggcatccttg cggcctcgtg gccacctccg tgtcctcgtt cagcgctcag
       61 ccgccgaccg tgctggcctc ggtgtcgcac acctcgcgct gccacgaggc gctggcgggc
      121 ggcgcggagt tcggcgtgca cctcctcacc gccgagcagg agccgctcgc gcgcatcttc
      181 gccgggctcg gagacgacaa gttcgccggg gtcgaatggg actgggacgg cgagctcgtg
      241 ccgcggatcg gcggatcgct cgcgtatctc cgctgccgcc gcgcagcgct gttcgagctc
      301 tacgaccact cgctgctcgt cggcgacgtg atcggcggcg acgtgcgcga cggcgagccg
      361 ctcgtgtaca tggagcgcag catggactgg cgcctcaccc ccgcttcata gatccgacct
      421 gcggtctagc ctcgcgccca tgagcgccgg tgcggtggcg aaggcgatcc tcgtggccgc
      481 gggcgtggtc gcgggcctgt acgtcctcta ccggatccgc gccgtcatcg ggctgctcgt
      541 gatcgcggtg ttcatcgcgg tggcgctcgg ccccgcggtc gactggttcg aacgccgcgg
      601 cgtgcgcagg cgcgggctgg cgatcctcac cacgtacctc tggctcttct tcgcggtgct
      661 cgtcgtcggg ctcgcggtgg tgccgccgat cgtcgaccag accgacgact tcgcgcgcaa
      721 cgtgccgtcc tacgtggacg acctctcgaa gaacgagacc gtgcgcgact acgacaagcg
      781 ctacggcatc tcgaaggagc tgcgcgcgca ggccgagcgc ctgcccaccc ggctcgacga
      841 cgccgcgagc gcgctccagg cggtcacggt gggcgtgttc tccacgctcg tgcagctcat
      901 caccgtgctc gtgatggcgt tcttcctcct gctcgagggg aagtcgatca ccgcctggct
      961 gttcggcgag ctcgggccgg cgcgcgggcc gcgctggagg aacgtggccg acgacgtcta
     1021 ccgatccgtg ggcggctacg tggtgggcaa cctcggcatc tcgctcgtgg ccggcctcag
     1081 cacctacgtc gtgctcactg tgctcggcgt gaggttcgcc gtcccgctcg ccgtgctgat
     1141 ggcgttcttc gacctcatcc cgctcgtcgg cgcgacgatc gcggcgatcc tgatcggcat
     1201 cgtcacggcg atcgaggact tccccaccgc catgctcgtg tggatcgcgt tcgcgatcct
     1261 ctaccagcag ttcgagaaca acctgctcca gccgttcgtc taccgccgca cggtggcgct
     1321 tcatccgctg ctcgtgatcg tcgcgatcct gatcggggcg aacctgctcg gggtgctcgg
     1381 ggcgctgctg gcgataccga tcgccggagc ggcgcagatc gtggtgaagg actggtgggc
     1441 ggtccgcaag cagcagccgt cgccgctgct caccgagccg cagccgcccg cagccggcgg
     1501 cgggcttccc gagccggcgt cgtagtcggc gcagaagcgc cacgaggcgc cgtggcagtg
     1561 gcttgacggc cgcctgatct tgctaggttt tcaggcgggt gaccgttccc tccgggaccg
     1621 tcgctcttgc aggactcgcg cagttagacg aagtcgcgtc gcatggcccg acgtcggatc
     1681 cctacgcggt actcgtttcg tactgcagaa ggaacccgcc ccggtgaatg ccccggcttc
     1741 ggccccagac tcacggcccc atgaacagcc gaccccctcc gagccacgcg cgctccgtgc
     1801 gcgcgaagac tggcggctct tgacgcgcta ccaccatcaa ggtgatctct ccgcgcgcga
     1861 cgagctcgtg gagcgcttcc tcccgctcgc acgccagctc gcacgccgct accagcgcgg
     1921 gaacgagccg ctcgacgacc tggtccaggt ggcgtgcatc gggctcgtga aggccgtgga
     1981 ccgcttcgac cccgaccgcg gcaccgcgtt ctcgagctac gccgtgccca cgattctcgg
     2041 cgagctgaag cgctacttcc gcgacgcggg ctgggcggtg cacgtgccgc gcgggatgca
     2101 ggagcgcgtg atgagcgtga accaggcggt cacgcggctg tcgcgcgacc tcggccgcgc
     2161 ccccactccg caggagatcg cggattcgat cggcgaggag gtggagctgg tgctcgaggc
     2221 gctcgaggcc gcgatcgcct acgactccgt gtcgctcgac accccgcgct cgagcaacga
     2281 ggacggcggc gacacgtacg ccgacaccgt gggcgccgtc gacgagcgct acgagctcgt
     2341 ggagtacacc accgcgatcg cgccgaccgt gcgcgccctc cccgagcgcg accggctcgt
     2401 gctgaagctc cgcttcgagg acgacctcac gcagctcgag atcgccgagc gcatcggcgt
     2461 gtcgcagatg cacgtctcgc gcctcatccg gcgcgcgctc gcgcggctgc gcaccgtggc
     2521 cgacgcgcag tagcgagcgc tccctaacat cgccgcgatg ccccgccgcg tcgcgctcct
     2581 cgtgtcggcc gtcgcgctcg tcgacacgat gttcttcgcc gcgatcgccc cgctcgtgcc
     2641 gttctacacc gacgagctcg gcctctcgaa gtcggcggcg gggatcctcg tgggcgccta
     2701 cccggccggc tcggtgctcg ggtcgctgcc ggccggatgg ctcgccgcgc gcgccggcac
     2761 caagcccacc acgctgctcg ggctcgccat catggccgcc acgagcgtgg tgttcggctt
     2821 cgcgcaccac atcgccgtgc tcgacgtgtc gcgcttcgtg cagggactcg ggggcgcgtg
     2881 catgtggtcc ggcggcctag gctggctcgt cggcgtcacg ccgcgcgccc ggcgcggcga
     2941 ggcgatcggc gtggtggtgg gcacggcggt gttcggcgcg ctgctcgggc cggtgctcgg
     3001 cgggatcgcc acggcgctcg gcacggggcc cgtgttcacc ggcgtgggcg tcgtggcggt
     3061 ggtgctcttc gtgctcgcgc tcggcacgca cgaggtggcc gaggccgtgc ctgtcacgat
     3121 cgcggcggcc aagcgcgtgg cgcgcgaccc gcgggtgatc ggcggcttct ggctcgtgct
     3181 gctgccggcg ctcaccttcg gcgtgctcga ggtgctcggg ccgctgcgga tcgacgacct
     3241 cggcggcggc gccggtgtgg tggcggccgc cttcctgctc tccgcgggcg cggaggcggc
     3301 gctcgcgccg atcgccggcc ggctgtcgga tcgccgcggc cggcggctgc cgctccagct
     3361 cgggctggcg ggcacggtgg tgttcggcat cgtcctgcct cttcccgagg aggcgtggct
     3421 ggtcgtggtg gcgatcgtgc tggcgggccc cgtgttcggc ctgatgtaca cgcccgcgat
     3481 ggcgctgctg tcggacggcg cggaggcggc cgggctcgac cagggagcgg ccgccgccgt
     3541 gatcagcctc gcctgggcca tcggccaggt gatcgggtcg gccgcgggcg cgcgcacggc
     3601 cgaggcggcg ggggacgcgg tgccctacgg gctcgtctcg gcgctggcgc tgttcacgct
     3661 tgccgtgtgg aggttccggg caccgc
//
LOCUS       DASSYW010000989         3683 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1078740, whole genome shotgun sequence.
ACCESSION   DASSYW010000989 DASSYW010000000
VERSION     DASSYW010000989.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3683)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3683)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3683
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1078740"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..196
                     /locus_tag="VFN38_15605"
     CDS             <1..196
                     /locus_tag="VFN38_15605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013252.1"
                     /translation="PEQYARDRRAQLLFLLPDGTELPLAEDGASDLQVERVARGRAPR
                     RRATTSGWTPNVRRSIPAPR"
     gene            193..921
                     /locus_tag="VFN38_15610"
     CDS             193..921
                     /locus_tag="VFN38_15610"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HET9013253.1"
                     /translation="MIMPPGRDDTARRGAFASMVAHELRTPLTAAYGALEMIARAGSV
                     SSTDDARNALLIDLAHRNTQRLLRIVEDCLDLEAASDDRLTLERALVQPSDVAALGVD
                     GARSAREQTGVDVMLQLDARRGIVGDRLRLGRALGHLVQNAVTFAPRGSVVTVTTSDD
                     DDRGTVRFAVEDRGAGIEPEQLRALFQRFDVREAPGRSRVGGLGLGLAFVRMVAEQHG
                     GVVAVKSTPGCTKIAFEIPWDVRR"
     gene            1014..2885
                     /locus_tag="VFN38_15615"
     CDS             1014..2885
                     /locus_tag="VFN38_15615"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HET9013254.1"
                     /translation="MPRSPAESLNPLEQGERHLRDFLKHARYLIQSTDMDGRLLFANE
                     TWQRTLGYCQADLVAGLTVQQLLAPESREEGLRQLATVLACTEPGHVSVVELCLVAKD
                     GRRVTVTGETDCRVVDGVPVATRAIFRDVSAQRLEEARARNTEAQYQGVVEVLREGIA
                     IIAANGTIELLNQSGERILGLRAADVVGHGMLDWPWRIVDEDGGEMPREAHPALVALH
                     TRRAQAEVIIGVRRGNDNAFIWIAVNARPLARPGVKEPYAVAVSFRDVTAERAVVEAL
                     REREARFRGVLETVRSVAVCLDTSGCVTFVNDFTLELTGWRRHEVMGTDWFARFVPPE
                     ENIAALFHEQIARGEVPRHHENDILTRAGERRRVRFDSTILRDDAGVVVGTASVGQDV
                     TEQVRAAQLKSELIAMASHELRTPLTAMRGALDLMRARPDQGERERMLVGMASRNVDR
                     LDRLMGDLLDVERIETGTERLRPSFIAVDQLFEIAQNRTRARLAQDELSLKIRTTPVE
                     LWVDAERIEQVVTNLIGNAANFAPAGSTITLMARDEEDQVRISVRDEGPGIPADKLET
                     IFEPFVKVDGGETKERGAGLGLFLCRAIVTQHGGRIWAESAPKRGTTVSFTIPKNEL"
     gene            complement(3067..>3683)
                     /locus_tag="VFN38_15620"
     CDS             complement(3067..>3683)
                     /locus_tag="VFN38_15620"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HET9013255.1"
                     /translation="DDAGERFSRLEAWTRTRFPIAGERAAQWSGQVLEPHDYLAFIGK
                     NPDGAEHVWLATGDSGMGMTHGTIAGMLLGDLLLGKEHRWAKLYDPKRVTLHRTELAT
                     MAKENVDVAAQFVDYVTPGQVDDVASIAPGQGRVVRRGMHKIAAYRDEEGVLHECSAV
                     CTHLKCIVDWNTAEKSWDCPCHGSRFSATGTVIAGPATADLEKL"
BASE COUNT          526 a         1359 c         1276 g          522 t
ORIGIN      
        1 gcccgagcag tatgcgcgcg accgccgcgc gcagctcctg ttcctgctcc ccgacggcac
       61 ggagctgccg ctcgccgagg acggcgccag cgatctccag gtcgagcgcg tcgcgcgcgg
      121 cagggcgccg cgccgccgcg ccaccaccag cgggtggacg cccaacgtcc gccgcagcat
      181 cccggctccc cgatgatcat gcctcccggc agggacgaca ccgcccggcg cggcgccttc
      241 gcgtcgatgg tcgcgcacga gctgcgcacg cccctcacgg cggcctacgg cgcgctcgag
      301 atgatcgcgc gtgcgggctc cgtgtcgtcc accgacgacg cgcgcaacgc gctcctgatc
      361 gacctcgcgc atcgcaacac ccagcggctg ctgcgcatcg tcgaggactg cctcgacctc
      421 gaggccgcgt ccgacgaccg gctcaccctg gagcgcgcgc tcgtgcagcc ctcggacgtg
      481 gcggcgctcg gcgtggatgg cgcccggtcg gcgcgcgagc agaccggcgt ggacgtgatg
      541 ctccagctcg acgcgcgccg cggcatcgtg ggcgaccgcc tgcgcctcgg ccgggcgctc
      601 gggcatctcg tgcagaacgc cgtcaccttc gccccgcgcg gaagcgtggt gaccgtgacg
      661 acgtcggacg acgacgatcg gggcacggtg cgtttcgccg tggaggaccg gggcgcgggg
      721 atcgagccgg agcagctgcg cgcgctcttc cagcgcttcg acgtccgcga ggcccccggt
      781 cgcagccgcg tgggcgggct gggcctcggc ctcgccttcg tgcgcatggt ggccgagcag
      841 cacggcggcg tggtggccgt gaagtcgacg ccggggtgca cgaagatcgc gttcgagatt
      901 ccgtgggacg tgagacgcta gaaaccgaac ttgcagggtc ccgaggtgca ggcccttcgc
      961 tgcgccatcg cgactggcgt gccccgcctg ccgtcttgtt cgtctctcgt atcatgcccc
     1021 gctcccccgc cgaatcgctc aatcccctcg aacagggcga gcggcatctc cgcgacttcc
     1081 tcaagcacgc gcggtacctg atccagagca ccgacatgga cggtcggctg ctcttcgcga
     1141 acgagacctg gcagcgcacc ctcggctact gccaggccga cctcgtcgcc gggctcaccg
     1201 tgcagcagct gctcgccccc gagtcgcgcg aggaggggct gcgccagctc gccaccgtgc
     1261 tcgcctgcac cgagccgggc cacgtcagcg tcgtcgagct ctgcctcgtc gccaaggatg
     1321 gccgccgcgt caccgtcacg ggcgagaccg actgccgcgt cgtggacggc gtgccggtgg
     1381 ccacgcgggc catcttccgc gacgtcagcg cccagcggct cgaggaggcg cgggcgcgca
     1441 acaccgaagc gcagtaccag ggcgtcgtcg aggtgctgcg cgaagggatc gcgatcatcg
     1501 ccgccaacgg cacgatcgag ctgctcaacc agagcggcga gcgcatcctc gggctccgcg
     1561 cggccgacgt ggtggggcac ggcatgctcg actggccctg gcgcatcgtg gacgaagatg
     1621 gcggcgagat gccgcgcgag gcgcaccccg ccctcgtcgc gctgcacacc cgccgcgcgc
     1681 aggccgaggt gatcatcggc gtccgccgcg gcaacgacaa cgcgttcatc tggatcgccg
     1741 tcaacgcccg gccgctcgcc cgcccgggcg tgaaggagcc gtatgccgtc gccgtctcct
     1801 tccgcgacgt caccgccgag cgggccgtcg tggaggcgct gcgcgaacgg gaggcccgct
     1861 ttcgcggcgt gctcgagacc gtgcgctccg tggccgtctg cctcgacacg tcgggatgcg
     1921 tcaccttcgt caacgacttc accctggagc tcaccgggtg gcggcgtcac gaggtgatgg
     1981 gcaccgactg gttcgcgcgc ttcgtgccgc ccgaggagaa catcgccgcg ctcttccacg
     2041 agcagatcgc ccgcggcgag gtgccgcggc accacgagaa cgacatcctc acccgcgccg
     2101 gcgaacggcg tcgcgtgcgg ttcgactcca ccatcctgcg cgacgacgcc ggcgtggtgg
     2161 tcggcacggc gagcgtgggg caggacgtga ccgagcaggt gcgcgccgcg cagctcaaga
     2221 gcgagttgat cgcgatggcg agccacgagc tgcgcacgcc gctcaccgcc atgcgcggcg
     2281 cgctcgacct catgcgcgcc aggccggacc agggcgagcg cgagcggatg ctcgtcggca
     2341 tggcctcgcg caacgtcgac cggctcgacc ggctgatggg cgacctgctc gacgtggagc
     2401 gcatcgagac cggcaccgag cggctgcgcc cctcgttcat cgccgtggac cagctgttcg
     2461 agatcgcgca gaatcgcacg cgcgcccggc tcgcgcagga cgagctttcc ctcaagatcc
     2521 gcacgacgcc ggtggagctg tgggtggacg ccgagcgcat cgagcaggtg gtgacgaacc
     2581 tcatcggcaa cgccgccaac ttcgcccccg ccggcagcac gatcacgctc atggcgcgcg
     2641 acgaggagga tcaggtgcgc atctccgtgc gcgacgaagg tcccggcatc ccggccgaca
     2701 agctggagac gatcttcgag ccgttcgtga aggtggacgg cggcgagacc aaggagcgcg
     2761 gcgcggggct cggtctcttt ctctgccgcg cgatcgtgac gcagcacggg ggccggatct
     2821 gggccgagag cgcgccgaag cgcggaacca cggtgtcgtt cacgattccg aagaacgaac
     2881 tctgaaagcg acagccaagg cggaacgagt caagctgtga agggctcgac ccgcatggaa
     2941 gcgtgaagag tcagcgtcgt gacgccgttg actcttcacg gcctcctgcc gtccacgccg
     3001 tccagcttcc ccgcttgacc cttcccgctg tttgccgcca gttcgtcttc ggcgcaggac
     3061 gaccgctcag agcttctcca ggtcggcggt agccggcccg gcgatcaccg tgccggtggc
     3121 cgagaagcgc gagccgtggc aggggcagtc ccagctcttc tccgccgtgt tccagtccac
     3181 gatgcacttg aggtgcgtgc acacggccga gcactcgtgc agcacccctt cctcgtcgcg
     3241 gtacgcggcg atcttatgca tgccgcggcg caccacgcgc ccttggcccg gcgcgatcga
     3301 cgccacgtcg tccacctggc ccggcgtcac gtagtccacg aactgcgcgg ccacgtccac
     3361 gttctccttc gccatcgtcg ccagctcggt gcggtgcagc gtgacgcgct tcgggtcgta
     3421 cagcttcgcc caccgatgct ccttccccag cagcaggtcg ccgagcagca tgccggcgat
     3481 cgtgccgtgc gtcatcccca tccccgagtc gccggtggcc agccacacgt gctcggcgcc
     3541 gtccgggttc ttcccgatga aggcgagata gtcgtgcggc tcgagcacct gcccggacca
     3601 ctgggcggcg cgctcgccgg cgatcgggaa gcgcgtgcgc gtccaggcct cgaggcgcga
     3661 gaagcgttcg ccggcgtcgt cct
//
LOCUS       DASSYW010000990         2034 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1226107, whole genome shotgun sequence.
ACCESSION   DASSYW010000990 DASSYW010000000
VERSION     DASSYW010000990.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2034)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2034)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2034
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1226107"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..948)
                     /locus_tag="VFN38_15625"
     CDS             complement(<1..948)
                     /locus_tag="VFN38_15625"
                     /inference="COORDINATES: protein motif:HMM:NF012876.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HET9013256.1"
                     /translation="MELLAPMVRAWSHRLAGRPLRERMRLLPIGAAVALAAIFLVSLT
                     LGVLDPRSLTRIQRDHYPALRAGQDMRESLTDLQNALQNAVATRDAARLSEMDSLSTA
                     FLAAVAEARVHAEDRSRAEALGQRFQEYYATVRPVSQAIAAGANADSLRAALARTSTD
                     YGALRRAVDDDIVAQEASVDEAFRSVRVMQLSATFGVALVALLAVLALGALSAATTLA
                     VTEPLEEMARVAGRVAQGDLSVSIEEPGDDEVGKAMRSMNDMVAYLNEMAGVAQAVSR
                     GDLSRSVSRRSDDDRFGSALAAMVGYLSEMSMTAERLAHG"
     gene            1173..>2034
                     /gene="argF"
                     /locus_tag="VFN38_15630"
     CDS             1173..>2034
                     /gene="argF"
                     /locus_tag="VFN38_15630"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004585 - ornithine carbamoyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HET9013257.1"
                     /translation="MTDRPHRDFLAIPDFSRDELLALFALAERMRRGEYQKKPLAGKT
                     LAMIFMKASTRTRVSFEVGTYQLGGHALFLSPRDVQLGRGEPIADTARVLSRYVDGIM
                     IRTFAHQDVEELARYADIPVINGLTDLLHPCQILADLLTVRQHLGGIEGKTVAWIGDG
                     NNMANSWIEAAGLFGLELRLACPTGFGPDTDIVRAARNRGAKLTLTTDPKEAADGAHV
                     ISTDVWASMGQEDEAAARRAAFAGYCVDRALVARGAPNAIVLHCLPAHRGEEITGDVL
                     DGPQSLAWVQA"
BASE COUNT          297 a          768 c          687 g          282 t
ORIGIN      
        1 gccgtgggcg agccgctcgg cggtcatcga catctcggag aggtagccca ccatcgccgc
       61 gagcgcgctc ccgaaccggt cgtcgtccga ccggcggctc acgctgcgcg agagatcgcc
      121 gcgcgacacc gcctgcgcca cgccggccat ctcgttcagg tacgccacca tgtcgttcat
      181 cgaccgcatc gccttcccga cctcgtcgtc gcccggctcc tcgatcgaca ccgagaggtc
      241 gccctgcgcc acgcggccgg cgacgcgcgc catctcctcg agcggctccg tcaccgccag
      301 cgtcgtcgcc gccgagagcg cgcccagggc gagcacggcg agcaacgcca cgagcgccac
      361 gccgaacgtc gcgctcagct gcatcacgcg cacggaccgg aacgcctcgt cgaccgacgc
      421 ttcctgcgcg acgatgtcgt cgtccaccgc gcgccgcagc gcaccgtagt ccgtcgacgt
      481 acgcgccagg gccgcacgaa gggagtcggc gttcgccccc gccgcgatgg cctggctcac
      541 cggccgcacg gtcgcgtagt actcctggaa ccgctgcccg agcgcctcgg cgcgcgagcg
      601 atcctccgca tgtacgcgcg cctcggccac cgcggcgagg aacgccgtgc tcagcgaatc
      661 catctccgag agccgcgccg cgtcccgcgt cgcgacggcg ttctgcaagg cgttctgcag
      721 gtcggtcagc gattcccgca tgtcctggcc ggcgcgcagg gcggggtagt ggtcgcgctg
      781 gatccgggtg aggctgcgtg gatccagcac gccgagcgtg aggctgacga ggaagatcgc
      841 ggccagcgcg accgccgcgc cgatcggcag gaggcgcatg cgctcgcgca gcggccgtcc
      901 ggcgagccgg tgcgaccacg cgcgtaccat cggagcgagc agttccatca gagagccggg
      961 gggggccgaa tacggcggga acgggagtgg cgaacgcagc ctcggagagg ccgctcgatg
     1021 gttgtgtgac gctcgatgga atggccagta acaccctcga gccccgccac gcgcccgcag
     1081 cgctcggccg gggtccggcg cttcgcttgc tcgtcgcttt cgccgcccgt tagctttgcc
     1141 cgcttgcggc tcgctccccc tctcgaccca tcatgaccga tcgtccccac cgcgacttcc
     1201 tggcgatccc ggacttctcc cgggacgagc ttctggccct cttcgccctc gccgagcgaa
     1261 tgcggcgcgg cgagtaccag aagaagcccc tcgccggcaa gaccctggcg atgatcttca
     1321 tgaaggcgtc cacccgcacg cgcgtgtcgt tcgaggtggg cacctaccag ctgggcggcc
     1381 acgcgctctt cctctccccg cgcgacgtcc agctcggacg cggcgagccg atcgccgaca
     1441 cggcgcgcgt cctgtcgcgc tacgtggacg gcatcatgat ccgcaccttc gcccaccagg
     1501 acgtcgagga gctggcgcgc tacgccgaca tccccgtcat caacgggctg accgacctgc
     1561 tgcacccctg ccagatcctc gccgacctgc tgaccgtccg gcagcacctc ggcggcatcg
     1621 aggggaagac cgtcgcgtgg atcggcgacg gcaacaacat ggccaactcg tggatcgaag
     1681 cggctgggct gttcggcctc gagctgcgcc tcgcgtgccc gaccggcttt ggccccgaca
     1741 ccgacatcgt gcgtgctgcc cgcaaccgtg gcgccaagct gacactaacg accgacccca
     1801 aggaggccgc cgacggcgcg catgtgatct cgaccgacgt gtgggcgtcg atggggcagg
     1861 aggacgaggc ggccgcacgg cgcgccgcat tcgcgggata ttgcgtcgac cgggcgctgg
     1921 tcgcgcgcgg agccccgaac gcgatcgtgc ttcactgcct gccggcgcac cgcggcgaag
     1981 agatcacggg cgacgtactg gacggcccgc agtcgctggc gtgggttcag gcgg
//
LOCUS       DASSYW010000991         2580 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_157519, whole genome shotgun sequence.
ACCESSION   DASSYW010000991 DASSYW010000000
VERSION     DASSYW010000991.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2580)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2580)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2580
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_157519"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..450)
                     /locus_tag="VFN38_15635"
     CDS             complement(<1..450)
                     /locus_tag="VFN38_15635"
                     /inference="COORDINATES: protein motif:HMM:NF024891.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HET9013258.1"
                     /translation="MRGLTIIGAGSEAGELAVARTACEVLREGGSSPSLYEPGLDETT
                     DAGALLDGARAAASGDVLVTVLGGGLLAPVTPRLSVRDLAASLGAPVVIALSGGPDAV
                     NVARLSVESARAARLAVKAVVVPEGESGAQLDGLVDVPVETLPANPTA"
     gene            complement(476..1414)
                     /locus_tag="VFN38_15640"
     CDS             complement(476..1414)
                     /locus_tag="VFN38_15640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="exopolyphosphatase"
                     /protein_id="HET9013259.1"
                     /translation="MTAIAERFRLVTRSDFDGLVCAALLKQIDMLDDIKFVHPKDMQD
                     GKVEIGPRDITTNLPYVPGAYLAFDHHASESSRVDSPHENHVIDPGAMSAARVVYDFF
                     GGHERFPNISDEMMEAVDKADAAQFSESEILEPTGWIFLSFLMDPRTGLGRFRDFRIS
                     NYDLMMQLIDDCTRLSIDEILETPDVKERVDLYRAHAADAADQIRRCSTVHGNLVVLD
                     LRDEEIIHPTNRFTLYALFPEQNISIHVLWGLKQQNTVFATGKSIIDRSSRTDVGELM
                     LEYGGGGHQAAGTCQVDNDQAERVLGELVARINADG"
     gene            complement(1485..1682)
                     /locus_tag="VFN38_15645"
     CDS             complement(1485..1682)
                     /locus_tag="VFN38_15645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013260.1"
                     /translation="MESEPDAIAAKLDAIEARLGECRAAVAVAAEGDPDVLKQLGEEV
                     DAMARDVAELKAAVSGPGLAG"
     gene            1800..2330
                     /locus_tag="VFN38_15650"
     CDS             1800..2330
                     /locus_tag="VFN38_15650"
                     /inference="COORDINATES: protein motif:HMM:NF018028.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HET9013261.1"
                     /translation="MATETPGGPAGAPDPAAGPQSPAGAQAPPAYGGAVAQQQSSVGP
                     RAGFWQRFAAALLDGILLGIINGILTAGLKGAGYALGILISIAYFTYFEGGPSGQTVG
                     KRALGIRVIDFDNGGPLGYARGFIRWISRYLSAIPLGLGYFWMLWDGQKQCWHDKLAN
                     DVVVPQSAYPVDKWPG"
BASE COUNT          353 a          878 c          957 g          392 t
ORIGIN      
        1 ggccgtgggg ttggccggca gcgtctccac gggcacgtcc acgaggccgt cgagctgcgc
       61 gcccgactcg ccctcgggca ccaccaccgc cttcaccgcg aggcgcgccg cgcgcgcgga
      121 ctccaccgag agccgcgcca cgttcaccgc gtccggcccg cccgagagcg cgatcaccac
      181 cggcgcgccg agcgaggcgg ccaggtcgcg caccgacaga cgcggcgtga ccggcgcgag
      241 cagaccgccg ccgagcacgg tgacgagcac gtcgcccgag gcggccgcgc gggcgccgtc
      301 gagcagggcg ccggcatcgg tggtctcgtc gagccccggc tcgtagagcg acggcgatga
      361 gccgccttcg cggagcacct cgcaggcggt ccgcgccacc gcgagctccc cggcttccga
      421 gccggcgccg atgatcgtca ggccgcgcat tgcggcgctt tatagcgcgc cgaggtcagc
      481 cgtcggcgtt gatgcgcgcg accagctcgc cgagcacgcg ctcggcctgg tcgttgtcca
      541 cctggcaggt gccggccgcc tggtgcccgc cgccgccgta ctcgagcatc agctcgccga
      601 cgtcggtgcg gcttgagcgg tcgatgatcg acttgccggt ggcgaagacg gtgttctgct
      661 gcttgaggcc ccagagcacg tggatcgaga tgttctgctc ggggaacagc gcgtagagcg
      721 tgaagcggtt ggtggggtgg atgatctcct cgtcgcggag gtcgagcacc acgaggttgc
      781 cgtgcacggt ggagcagcgg cggatctggt cagcggcgtc ggcggcgtgg gcgcggtaga
      841 ggtccacgcg ctccttcacg tcgggcgtct cgaggatctc gtcgatcgag agccgcgtgc
      901 agtcgtcgat cagctgcatc atcaggtcgt agttcgagat gcggaagtcg cggaagcggc
      961 cgaggccggt gcgcgggtcc atcaggaagc tgaggaagat ccagccggtg ggctcgagga
     1021 tctcgctctc ggagaactgg gcggcgtcgg ccttgtcgac ggcctccatc atctcgtcgc
     1081 tgatgttcgg gaagcgctcg tggccgccga agaagtcgta cacgacgcgg gcggcggaca
     1141 tcgcgcccgg gtcgatcacg tggttctcgt gcggcgagtc gacgcgcgag gactcgctcg
     1201 cgtggtggtc gaaggcgagg taggcgcccg gcacgtaggg gaggttggtg gtgatgtcgc
     1261 gcggcccgat ctcgaccttg ccgtcctgca tgtccttcgg gtggacgaac ttgatgtcgt
     1321 cgagcatgtc gatctgcttc agcagcgctg cgcagacgag accgtcgaag tcgctgcgcg
     1381 tgaccagcct gaacctctcc gcaattgcag tcatgcgggt cacatcggac gccgcgggcg
     1441 gtggctttag cccacggttg atctatgcca gacggttcag cgactcaccc ggcgaggccg
     1501 gggcccgaca ccgctgcctt cagctccgcg acgtcgcggg ccatcgcgtc gacctcctcg
     1561 ccgagctgct tgagcacgtc gggatcgccc tcggcggcca cggccacggc cgcgcggcac
     1621 tcgccgaggc gcgcctcgat cgcgtccagc ttcgcggcga tggcgtcggg ctccgattcc
     1681 atgcgggcat ttaaccgcgt gccggacgaa acgacgggtg gcgcgccggg cccgcaggct
     1741 gtagcttgcc gcgatcgccc cggaatgggg tgcctcgata tcgaaacagg gggaatcaca
     1801 tggcgacgga gacgcccggc ggacccgccg gcgcgccgga cccggccgca ggaccgcagt
     1861 cacccgcagg cgcccaggcg ccgcccgcgt acggcggcgc ggtggcgcag cagcagagct
     1921 cggtgggccc gcgcgcgggg ttctggcagc gcttcgcggc cgccctgctc gacgggatcc
     1981 tgctcggcat catcaacggg atcctcacgg cggggctgaa gggggccggc tacgcgctcg
     2041 gaatcctgat ctcgatcgcg tacttcacgt acttcgaggg cggcccgtcc ggccagacgg
     2101 tcggcaagcg cgcgctcggc atccgcgtga tcgacttcga caacggcggt ccgctcggat
     2161 acgcacgcgg cttcatccgc tggatctcgc gctacctgtc ggccatcccg ctggggctcg
     2221 gctacttctg gatgctctgg gacggccaga agcagtgctg gcacgacaag ctggcgaacg
     2281 acgtggtcgt gccgcagtcg gcctacccgg tcgacaagtg gcccggctga gctgaagctc
     2341 cgcatcatcc ggcctcggcg gcgactggga gcagcgtcgc gcggggccgg gtggtcggtt
     2401 cgccggtgtt gaacgtcccc cagcggggta caagaccccg cgataccggt cggcgcgcgg
     2461 ggcgccggtc agggctgggg gagacgtctt gctgggaggc aaccgttcga ggcgtgcgct
     2521 ggtcgcgctc gcctgcatgc ttggtctgat cgccgcgctc gctccggcgg cgggcgccgc
//
LOCUS       DASSYW010000992         2389 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1097116, whole genome shotgun sequence.
ACCESSION   DASSYW010000992 DASSYW010000000
VERSION     DASSYW010000992.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2389)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2389)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2389
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1097116"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            25..978
                     /locus_tag="VFN38_15655"
     CDS             25..978
                     /locus_tag="VFN38_15655"
                     /inference="COORDINATES: protein motif:HMM:NF014796.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004784 - superoxide dismutase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006801 - superoxide metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-Mn family superoxide dismutase"
                     /protein_id="HET9013262.1"
                     /translation="MRYQLKQIHCRPWTLSYLSVKLIESHYENNYGGALRRLNAITQQ
                     LESLDFASTPGHVLNGLKREELVALNSTLLHELYFASMGGDGQPTKGMTEILARDFGS
                     LDRWRAEFRAMGYALGGGSGWVLLTYVPRDGRLINQYAAEHSQAVASGVPILALDMYE
                     HAYHIDFGANARAYVDTFLRNVDWPALEVRYDDAAKVPAPRRLEQPEFGDVPGIGVEE
                     VRDMMAAGRPVQVIDVRPRAVVSRLQDIAEGVRWRDPEQLEQWMGELSKSEPVVVYCA
                     YGFHVACKTANELREAGFDAKYMDSGHSGWKAIGAPIRMNR"
     gene            complement(1088..1162)
                     /locus_tag="VFN38_15660"
     tRNA            complement(1088..1162)
                     /locus_tag="VFN38_15660"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1128..1130),aa:His,seq:gtg)
     gene            complement(1227..1303)
                     /locus_tag="VFN38_15665"
     tRNA            complement(1227..1303)
                     /locus_tag="VFN38_15665"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1267..1269),aa:Arg,seq:tct)
     gene            complement(1373..1449)
                     /locus_tag="VFN38_15670"
     tRNA            complement(1373..1449)
                     /locus_tag="VFN38_15670"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1413..1415),aa:Pro,seq:tgg)
     gene            complement(1518..1853)
                     /locus_tag="VFN38_15675"
     CDS             complement(1518..1853)
                     /locus_tag="VFN38_15675"
                     /inference="COORDINATES: protein motif:HMM:NF014624.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-sensitive transcriptional regulator"
                     /protein_id="HET9013263.1"
                     /translation="MTSRRRSTADAPAPAAHAHAPSPHAVGQRTALTKRLNRIEGQVR
                     GIGKMLAEDRYCVDILTQVSAVRSALDALGLELLEHHLHGCVQNAVKSGKGEPAIDEA
                     MHVIRKFAA"
     gene            complement(1837..2046)
                     /locus_tag="VFN38_15680"
     CDS             complement(1837..2046)
                     /locus_tag="VFN38_15680"
                     /inference="COORDINATES: protein motif:HMM:NF012621.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HET9013264.1"
                     /translation="METVTLNVKGMTCGGCVASVTRVLKAVPGVEAVDVKLQPGQATV
                     RYDAAQVAVPKLKAAIEDAGYDVAA"
     gene            complement(2063..>2389)
                     /locus_tag="VFN38_15685"
     CDS             complement(2063..>2389)
                     /locus_tag="VFN38_15685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019467715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HET9013265.1"
                     /translation="NDAPALAAADVSFAIGAGSAVAIEAADITVIRSDLGAVADAILL
                     SRATLRKIRQNLFFAFAYNVLGIPLAAIGALSPVIAGAAMAMSSVSVVSNALLLKRWR
                     PAGASR"
BASE COUNT          384 a          831 c          803 g          371 t
ORIGIN      
        1 cacgttgtgc ttggaggtgt catcgtgcgc tatcaactga agcagatcca ctgtcgtccc
       61 tggacgctct cctacctgtc ggtgaagctc atcgagagcc actacgagaa caactacggc
      121 ggggcgctca ggcgcctcaa cgccatcacc cagcagctcg agtcgctcga cttcgcgagc
      181 acgcccggcc acgtgctgaa cgggctcaag cgcgaggagc tggtcgcgct caactcgacg
      241 ctgctgcacg agctctattt cgcgagcatg ggcggcgacg gccagccgac gaagggcatg
      301 accgagatcc tcgcgcgcga cttcggctcg ctcgatcgct ggcgcgcgga gttcagggcg
      361 atgggatacg ccctcggcgg cggctcgggc tgggttctgc tgacctacgt tccgcgcgac
      421 gggcgcctca tcaaccagta cgctgccgag cactcgcaag cggtcgccag cggagtgccc
      481 atcctcgcgc tggacatgta cgagcatgcg taccacatcg acttcggtgc caacgccagg
      541 gcatacgtcg atacgttcct gcgcaacgtc gattggcccg cgctggaggt gcgctatgac
      601 gacgcggcca aggttcccgc gccgcggcgg ctcgagcaac cggagttcgg cgacgtcccg
      661 ggcatcggcg tggaggaagt gagggacatg atggccgccg gcaggcccgt ccaggtcatc
      721 gacgtgcgcc cgcgggcggt cgtttcgcgc ctgcaggaca tcgcggaggg cgtccggtgg
      781 cgcgatcccg agcagctcga gcaatggatg ggcgagctgt cgaaatcaga accggtggtc
      841 gtgtactgcg cgtatggctt tcacgtcgcc tgcaagaccg cgaacgagct gcgcgaagcg
      901 ggcttcgatg cgaagtacat ggacagcgga cactccgggt ggaaggcgat cggcgcgccg
      961 atcaggatga acaggtgagg cattgcccga cggcaaggac gcctcgcgtc gatggctccg
     1021 ccatgcggcc cgtggcgcgt tcacctgcgc cgcgcgaggc gttcgccacc gtggaatgct
     1081 agaaaggtgg ggtggctgat gggcttcgaa cccacgacaa ccggaatcac aatccgggac
     1141 tctaccgctg agctacagcc accgtcgatg caaccgatgc gcgccccggg cggggcggcc
     1201 tgaaccgcgc gccgcctgcc gtggaatggc gcgcccgaca ggactcgaac ctgttacccc
     1261 cggcttagaa ggccggtgct ctatccgatt gagctacggg cgcctgtcgg acgaggcgag
     1321 cgccgcacgc gcatcgacgt cgccgtcgac cgctgccgcc ctcgcgttgg gttggtcggg
     1381 gtggagagat ttgaactccc gacatcttgc tcccaaagca agcgcgctac caggctgcgc
     1441 tacaccccga ggggcgcgat tatgccctac gcgacgcccc cgggcaaacg gcgggacgca
     1501 agtcgcctcc cgacccgcta cgccgcgaac ttgcggatca cgtgcatcgc ctcgtcgatc
     1561 gccggctcgc ccttccccga cttcaccgcg ttctgcacgc aaccgtgcag gtgatgctcg
     1621 agcagctcga gtccgagcgc gtcgagcgcc gagcgcaccg ccgacacctg cgtcaggatg
     1681 tcgacgcagt agcggtcctc ggcgagcatc ttgccgatgc cccgcacctg tccctcgatg
     1741 cggttgaggc gcttggtcag cgcggtgcgc tgcccgaccg cgtgaggcga cggcgcatgg
     1801 gcgtgcgccg ccggggcggg agcgtcggcc gtcgacctac gccgcgacgt catagccggc
     1861 atcctcgatc gcggccttga gcttcggcac cgcgacctgc gccgcgtcgt agcgcaccgt
     1921 cgcctgcccc ggctgcagct tgacgtcgac cgcctcgacg ccggggaccg ccttcagcac
     1981 gcgcgtgacg ctcgcgacgc atccgccgca ggtcatgccc ttgacgttca gtgtgaccgt
     2041 ttccatgtga cgctcctttc tcctagcggc ttgcgccggc gggccgccag cgcttcagca
     2101 gcaacgcatt gctcacgacc gacaccgacg acatcgccat cgccgcgccg gcgatcaccg
     2161 ggctcagcgc cccgatcgcg gcgagcggga tgcccagcac gttgtaggcg aacgcgaaga
     2221 acaggttctg gcggatcttg cgcaacgtcg cgcgcgacag caggatcgcg tcggcgaccg
     2281 ctccgagatc gctgcggatc accgtgatgt cggcggcctc gatcgccacg gcggagcccg
     2341 cgccgatcgc gaagctcacg tccgcggccg cgagcgccgg cgcgtcgtt
//
LOCUS       DASSYW010000993         2497 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_491241, whole genome shotgun sequence.
ACCESSION   DASSYW010000993 DASSYW010000000
VERSION     DASSYW010000993.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2497)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2497)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2497
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_491241"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1620)
                     /locus_tag="VFN38_15690"
     CDS             complement(<1..1620)
                     /locus_tag="VFN38_15690"
                     /inference="COORDINATES: protein motif:HMM:NF018899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="POTRA domain-containing protein"
                     /protein_id="HET9013266.1"
                     /translation="MNRIFCVAVALLAVGASARAQDPAATGRCAAPDSIVFRGATRTP
                     DAALRAETGLAPGALNYRVIDRAIKALYALGQFEDVQATCELEPGGVRAQLVFNLRER
                     PLLNAVDVTGTDRVSRNDVRDRVDLLVGRPVDPAQVARAVQRIDSLYQAQGYFLARVK
                     PETTMVNGQVDLLFRVDEGRRLAVSGVDIKGNQGVSDKQVVGAMSTKPEGFLWLRKGE
                     LDADKYAADVSEKIPALYAEKGFIDAQVLKDTVKVDREKGKALVDITVKEGPRYKIGT
                     FEVTGSRHFSNEDIARFYPFGDRPTTITGAVKGLLRTGRGNDDDLYFDQTRWDEATRS
                     VGEAYANEGYIYANVRPVVQRTVGPDGAPTVNLRWEVDERQPAIVNRVEVLGNDITSE
                     SCIRNQIFVVPGDVFRREALIRSYQSIGNLGFFETPLPAPDTRTANDNGDVDVIFRVK
                     EKRTGNVNFGASVGQGAGVGGFIGFDQPNLFGLCKRGSLNWQFGQYINDFSMSYTDPF
                     IRESQISGTVTAYHSQTRYYVSNVGRQTRVGG"
     gene            complement(1706..>2497)
                     /locus_tag="VFN38_15695"
     CDS             complement(1706..>2497)
                     /locus_tag="VFN38_15695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HET9013267.1"
                     /translation="TELARSLAKFLFADPTALIRVDMSEYMEKFSVSRLIGAPPGYVG
                     YEDSGTLTKAIRRKPYSVILLDEIEKAHPDVFNILLQVLDEGHLTDNYGRQIDFKNTV
                     VIMTSNVGARDITKGKGLGFTTGDSVQSFERMQEKVKEELKVVFNPEFLNRLDDVIVF
                     HPLNREHISQIVSILLKDVRKRLAEDDLTIKLTDAATELLVKNGYDEAYGARPLKRSI
                     QKFIEDPLSEKILLGEFSKGDEIEVDASPDGSKLDFRVLSSASKA"
BASE COUNT          376 a          871 c          808 g          442 t
ORIGIN      
        1 gccgccgacg cgcgtctgcc gccccacgtt gctcacgtag tagcgcgtct gcgagtgata
       61 cgccgtgacc gtgccggaga tctgcgactc cctgatgaag gggtcggtgt agctcatgct
      121 gaagtcgttg atgtactgcc cgaactgcca gttcagcgag ccgcgcttgc agaggccgaa
      181 caggttcggc tggtcgaagc cgatgaagcc gcccacgccg gcgccctgcc ccaccgaggc
      241 gccgaagttg acgttgccgg tgcgcttctc cttcacgcgg aagatcacgt ccacgtcgcc
      301 gttgtcgttg gccgtcctgg tgtccggcgc cggcagcggg gtctcgaaga agccgaggtt
      361 gccgatgctc tgatagctgc ggatgagcgc ctcgcggcgg aagacgtccc cgggcacaac
      421 gaagatctgg ttgcggatgc acgactccga cgtgatgtcg ttgcccagca cctccacccg
      481 gttcacgatc gccggctgcc gctcgtccac ctcccaccgc aggttcaccg tgggcgcgcc
      541 gtcggggccc acggtgcgct gcaccacggg ccgcacgttg gcgtagatgt acccctcgtt
      601 ggcgtaggcc tcgcccacgc tgcgcgtcgc ctcgtcccag cgcgtctggt cgaagtagag
      661 atcgtcgtcg ttgccgcggc ccgtccgcag caggcccttc acggccccgg tgatcgtcgt
      721 cggccggtcg ccgaacgggt agaagcgcgc gatgtcctcg ttggagaagt ggcggctccc
      781 ggtcacctcg aaggtgccga tcttgtaccg cggcccctcc ttcaccgtga tgtccacgag
      841 cgccttgccc ttctcgcggt ccaccttgac cgtgtccttc agcacctgcg cgtcgatgaa
      901 gcccttctcg gcgtagagcg cggggatctt ctcgctcacg tcggcggcgt acttgtccgc
      961 gtccagctcg cccttccgga gccagaggaa gccctccggc ttggtgctca tcgccccgac
     1021 cacctgcttg tccgagacgc cctgattccc cttgatgtcc acccccgaca cggcgagccg
     1081 gcgtccctcg tccacccgga agaggaggtc gacctggccg ttgaccatgg tcgtctccgg
     1141 cttcacgcga gcgaggaagt agccctgcgc ctggtacagc gagtcgatgc gctgcaccgc
     1201 ccgcgcgacc tgcgccggat cgaccggccg tccgacgagg aggtccaccc ggtcccggac
     1261 gtcgttgcgg gacacccggt cggtgccggt gacgtccacc gcgttgagca gcggccgctc
     1321 ccgcagattg aaaacgagct gggcgcgcac gccgcccggc tccagctcac aggtggcctg
     1381 aacgtcctcg aactggccga gcgcgtagag cgccttgatg gcgcggtcga tcacgcggta
     1441 gttcagcgcg ccgggcgcga gacccgtctc cgcgcggagc gcggcgtcgg gcgtgcgcgt
     1501 ggcgccgcgg aagacgatgc tgtcgggtgc ggcgcagcgc cccgtcgcgg cggggtcctg
     1561 ggctcgcgcc gacgccccca ctgcgagcag ggcgacggca acacaaaaaa tgcgattcat
     1621 cacgacaata tacacagaaa aaggccggct gggtcccccg agcttggacc cagccggccg
     1681 gccgcgggtt gccccgccgt tgaccctacg ccttcgacgc gctcgacagc acccggaaat
     1741 cgagcttgct gccgtccggc gacgcatcca cctcgatctc gtcgcccttc gagaactcgc
     1801 ccaggagaat cttctccgag aggggatcct cgatgaactt ctggatggag cgcttgagcg
     1861 gacgcgcacc atacgcctcg tcgtacccgt tcttcaccag cagctcggtg gccgcgtcgg
     1921 tgagcttgat cgtcaggtcg tcctcggcca gccgcttccg cacgtccttc agcaggatgg
     1981 agacgatctg cgagatgtgc tcccggttca gggggtggaa gacgatgacg tcatcgagcc
     2041 ggttcaggaa ctccgggttg aagacgacct tcagctcctc cttcaccttc tcctgcatcc
     2101 gctcgaacga ctgcacgctg tcgcccgtcg tgaagccgag gcccttgccc ttggtgatgt
     2161 cgcgggcgcc gacgttggag gtcatgatca cgaccgtgtt cttgaagtcg atctgccggc
     2221 cgtagttgtc cgtcagatgg ccctcgtcga gcacctggag caggatgttg aacacgtccg
     2281 ggtgggcctt ctcgatctcg tcgagcagga tcaccgagta gggcttccgc cggatcgcct
     2341 tggtgagcgt cccggaatcc tcgtagccca cgtagcccgg cggcgcgccg atgagccgcg
     2401 acacggagaa cttctccatg tactcgctca tgtccacgcg gatgagcgcc gtggggtcgg
     2461 cgaacaggaa cttggccagc gaccgcgcca gctccgt
//
LOCUS       DASSYW010000994         2459 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1019667, whole genome shotgun sequence.
ACCESSION   DASSYW010000994 DASSYW010000000
VERSION     DASSYW010000994.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2459)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2459)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2459
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1019667"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..520)
                     /locus_tag="VFN38_15700"
     CDS             complement(<1..520)
                     /locus_tag="VFN38_15700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase"
                     /protein_id="HET9013268.1"
                     /translation="MTLCTPEMMERRFDEIAETPPGSPLPADTSILVEQLLTALEHGT
                     VRAARCTPQGEWRAVPWVKRGILVGFRLGRMVDMSPSGAHRSAFHFFDKHTFPTRELR
                     LDDQVRVVPGGSTIRRGAYLAPGVVCMPPMYVNVGAWVGAGTMIDSHALVGSCAQIGA
                     RVHLSAAAQIGGV"
     gene            complement(517..1428)
                     /gene="dapA"
                     /locus_tag="VFN38_15705"
     CDS             complement(517..1428)
                     /gene="dapA"
                     /locus_tag="VFN38_15705"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008840 - 4-hydroxy-tetrahydrodipicolinate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HET9013269.1"
                     /translation="MTTPRSEREGRFFGCGTALVTPFTRGGEVDEGALRALVDWQIAE
                     GIHFLVPCGSTGEAATMTLPEQRRVVEIVVEQVRGRVPVVAGAGSNDTRRAVAISREM
                     RDAGATHLLHVSPMYNKPPQRGLVAHFRAVAEATELPVILYNVPGRTGSNIEARTTLE
                     LATVPNIVGIKEASGNLAQISDIIRERPPHFSVLSGDDALTLAVMAAGGDGLISVTSN
                     AAPRAMAELVERGARGDAAGCRELHYRLVPWMQAAFVESNPIPVKAALAMQGRIENVL
                     RLPLVPLSDTHAAAVRASLVAAGALTS"
     gene            complement(1425..2159)
                     /locus_tag="VFN38_15710"
     CDS             complement(1425..2159)
                     /locus_tag="VFN38_15710"
                     /inference="COORDINATES: protein motif:HMM:NF017024.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008839 - 4-hydroxy-tetrahydrodipicolinate
                     reductase [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate reductase C-terminal
                     domain-containing protein"
                     /protein_id="HET9013270.1"
                     /translation="MNAAPERPLRLAIIGQGKMGRAIAALAGERGFEVVATIGGRDNP
                     GGSGISEASLRGADVAVEFTEPSAAPTNIEACMDIGVPVVCGTTGWYDQLEAVVSDVR
                     RNDGALLYAANFSVGVAIFLQIVREAARGVAAAGGFDAHIVETHHAAKKDAPSGTALL
                     IQRAVADVLGAAPPVTSVRTGSVPGTHELILDGVFEQLRLEHLARDRRVFADGALRAA
                     RWLSGRKGVFTMDDVLGAGAPGGGSR"
     gene            complement(2159..>2459)
                     /locus_tag="VFN38_15715"
     CDS             complement(2159..>2459)
                     /locus_tag="VFN38_15715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013271.1"
                     /translation="VSATVDDPAHLDALVVDLAPLGDVSVERNRGIVAVVGAGLGDDS
                     AAMGRALAAVDGVKIHMLSLSATGINLTMIVDAADVAPAMQRLHAAFFGASGGES"
BASE COUNT          345 a          924 c          865 g          325 t
ORIGIN      
        1 ggacgccgcc gatctgcgcc gccgcgctca ggtgcacccg ggcgccgatc tgggcgcacg
       61 agccgacgag ggcatgcgag tcgatcatcg tcccggcccc cacccaggcg ccgacgttga
      121 cgtacatcgg gggcatgcag accacgccgg gcgccagata ggcgccgcgc cggatggtgg
      181 atccgccggg cacgacgcgc acctgatcat cgagccgcag ctcgcgggtc gggaaggtgt
      241 gcttgtcgaa gaagtggaag gccgaccggt gcgcgcccga cggcgacatg tccaccatcc
      301 ggccgagccg gaagccgacg aggatgccgc gcttcaccca gggcaccgcg cgccactctc
      361 cctggggagt gcatcgggcc gcgcgcaccg tgccatgctc gagcgccgtc aacagctgct
      421 cgacgaggat cgacgtgtcg gcggggagcg gcgagccggg cggcgtctcg gcgatctcgt
      481 cgaagcgccg ctccatcatc tcgggggtgc agagcgtcat gacgtcaggg ctccggcggc
      541 gacgagactc gcgcgaacgg cggccgcgtg cgtgtcggac agggggacga gggggaggcg
      601 gagcacgttc tcgatccgcc cctgcatggc gagggcggcc ttcacgggaa tcggattgga
      661 ctcgacgaac gccgcctgca tccagggcac gagccggtag tgcagctcgc ggcagcccgc
      721 cgcgtcgccg cgcgccccgc gctccaccag ctcggccatc gcgcgcggcg cggcgttcga
      781 ggtcaccgag atcagcccgt ccccacccgc cgccatcacg gcgagcgtca gcgcgtcgtc
      841 gcccgagagg acgctgaagt gcggcggacg ctcgcgaatg atgtcggaga tctgcgcgag
      901 gttgcccgat gcttccttga tccccacgat gttgggcacc gtcgccagct cgagcgtcgt
      961 ccgcgcctcg atgttgctcc cggtgcgccc gggcacgttg tagaggatca ccggcagctc
     1021 ggtcgcctcg gcgaccgccc ggaagtgcgc gacgaggccg cgctgcggcg gcttgttgta
     1081 catcggcgag acgtggagca ggtgcgtcgc gccggcgtcg cgcatctcgc gcgagatggc
     1141 gaccgcgcgg cgggtgtcgt tcgagccggc gccggcgacc accggcacgc gcccgcgcac
     1201 ctgctcgacg acgatctcca cgacgcgccg ctgctcgggg agcgtcatcg tcgccgcctc
     1261 cccggtcgag ccgcagggca cgaggaagtg aatcccctcg gcgatctgcc agtcgaccag
     1321 cgcgcgcagg gcgccctcgt ccacctcgcc gccgcgcgtg aatggcgtga cgagcgcggt
     1381 gccgcagccg aagaagcgtc cctcgcgctc gctccgtggc gtggtcatct gctgcctcct
     1441 cccggcgcgc ccgcgccgag cacgtcgtcc atcgtgaaca ctcccttgcg gccgctgagc
     1501 cagcgcgccg cgcgcagggc gccgtcggcg aacacgcgcc ggtcgcgcgc caggtgctcc
     1561 agccgaagct gctcgaacac gccgtcgaga atgagctcgt gcgtgccggg caccgagccg
     1621 gtgcgcacgc tcgtcaccgg cggcgccgcg ccgagcacgt ccgccaccgc ccgctggatg
     1681 aggagcgccg tccccgaggg cgcgtccttc ttcgccgcgt ggtgcgtctc cacgatgtgc
     1741 gcgtcgaacc cgccggccgc cgcgacgccg cgagccgcct cccggacgat ctgcaggaag
     1801 atcgcgacgc cgaccgagaa gttggcggcg tagagcagcg cgccgtcgtt cctccgcacg
     1861 tcggagacca cggcctccag ttgatcgtac catccggtcg tgccgcagac caccggcacg
     1921 ccgatgtcca tgcacgcctc gatgttggtc ggtgcagcag acggctctgt gaactcgacc
     1981 gcgacgtccg cgccgcgcag cgaggcctcg ctgatcccgc tcccgccggg attgtcccgg
     2041 ccaccgatcg tcgccaccac ctcgaagccg cgctcgccgg cgagggcggc gatggcgcgt
     2101 cccatcttcc cctggccgat gatcgccagg cgcaacggtc gctccggagc cgcgttcatc
     2161 agctctctcc ccccgaggcg ccgaagaagg cggcgtgcag gcgctgcatc gccggcgcca
     2221 cgtcggcggc gtccacgatc atcgtcaggt tgatccccgt cgcgctgagc gagagcatgt
     2281 gaatcttcac gccgtccacc gccgcgaggg ctcggcccat cgccgcgctg tcgtcgccca
     2341 gccccgcacc gacgacggcg acgatcccac ggttccgctc gaccgagacg tcgcccagcg
     2401 gcgcgaggtc cacgacgagc gcatcgagat gggcggggtc gtccaccgtc gccgagacg
//
LOCUS       DASSYW010000995         2924 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_673787, whole genome shotgun sequence.
ACCESSION   DASSYW010000995 DASSYW010000000
VERSION     DASSYW010000995.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2924)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2924)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2924
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_673787"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..705)
                     /locus_tag="VFN38_15720"
     CDS             complement(<1..705)
                     /locus_tag="VFN38_15720"
                     /inference="COORDINATES: protein motif:HMM:NF013429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIM barrel protein"
                     /protein_id="HET9013272.1"
                     /translation="MLTRRDFLKTLSATAVAGALPAGCRMPAAAAPASRIRFGYAAIT
                     WGGADRQAIDDIAALGYPGIQLRSGAVAQFGADPAELRALLARRRLTFVALSSGNLSI
                     DPAREGAMLAEHTAHARFLRDAGGSNLQLIDERPAGRDVTADDCVRLGGLLTEIGRRA
                     ADVGVRVVYHPHMGTIGERPENAERVLAAADPVTVKLLLDVAHYTQGGGDPAAAIRRH
                     HAARLSGAHGRGWAGRG"
     gene            820..2163
                     /locus_tag="VFN38_15725"
     CDS             820..2163
                     /locus_tag="VFN38_15725"
                     /inference="COORDINATES: protein motif:HMM:NF039847.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HET9013273.1"
                     /translation="MSDDERGITRRDFLERTGAAGLGVALGGVLPVASRREQPGRSAN
                     ETVVVAVIGRNGRGMVHAQNFARLPNAQVAYLCDVDGAVLRKAAGAIRQSRTAVAIED
                     FRRALDDKAVDAVSIATPDHWHTAMAILALKAGKHVYLEKPCGHNAREGELLTAAAKK
                     YDRHVQQGSQQRSAARTIEALQMVREGAIGAPYLVRAWYANSRGGIGHGRPAPVPSTL
                     NYELWQGPAPRTPYRDNVVHYNWHWFKRWGTGEICNNGTHEIDIARLALGVDYPTSVT
                     SSGGRYHFQDDWEFPDTQDVTFEFAGGKRILWQGQSCNALKPFDRGRGTAIYGTGGSM
                     VLDRDGYLQYDLKQKLVKESLEPKQGNGVDLIGDDAATWQHMENFLGAIRTGETLRAP
                     ITDGARSVHLCHLGNIAQYTGRALRIDPANGHIMGDTEAMRHWSRSYAPGWAPTA"
     gene            2145..>2924
                     /locus_tag="VFN38_15730"
     CDS             2145..>2924
                     /locus_tag="VFN38_15730"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HET9013274.1"
                     /translation="MGADRVSRVHTLAAASLLTLVASTTALPAQRPRELERHVVRVQG
                     HPITVWSKHPGLPTRRSLVLVHGRTWSARPNFDLRVPDSRRNASLMDALVARGYSVYA
                     IDLRGYGGTPRDSTGWLTPDRAERDVSVVLDSVFERERQGSGVRIRAGAQRPVLLGYS
                     RGAQVAMLVAQRHPDKIAGLVLYGYPEPVPAATSGEQTPATPPRARTTAAAAGEDFIS
                     PAVTPPGVRDAYVRAATLTDSIRMDWRDEARFLELDPGRVRV"
BASE COUNT          458 a          999 c         1068 g          399 t
ORIGIN      
        1 gccacgccca gcccagccgc gcccgtgcgc tccagaaagt cgcgccgcgt gatgccggcg
       61 gatggccgcg gcgggatccc ccccgccctg cgtgtagtgc gcgacgtcga gcagcagctt
      121 cacggtcacc ggatccgcgg cggccagcac gcgttcggcg ttctccggcc gctcgccgat
      181 ggtgcccatg tgcgggtgat agacgacccg cacgccgacg tccgcggcgc gacgcccgat
      241 ctccgtgagg aggccgccga gccgtacgca gtcgtcggcg gtgacgtccc gtcccgcggg
      301 gcgctcgtcg atgagctgga gatttgaccc gcccgcatcg cggaggaatc gcgcatgcgc
      361 cgtgtgctcg gcgagcatcg cgccctcgcg cgccggatcg atgctgaggt tgccgctcga
      421 caacgccacg aaggtgagac ggcggcgtgc gagcagggcg cgcagttcgg cgggatcggc
      481 gccgaactgg gcgaccgccc cgctgcgaag ctggatgccg ggatagccga gcgcggcgat
      541 gtcgtcgatc gcctggcgat ccgcgccgcc ccacgtgatg gcggcgtagc cgaagcggat
      601 gcgcgacgcg ggcgccgcgg cggccggcat tcgacacccg gccgggagcg ctccggcgac
      661 ggcggtcgcg gacagagtct tgaggaagtc gcggcgagtc agcatggcat caccggttgc
      721 tgggtgcccg aaggccgttt gcccacggaa cggtcgcgcc gtaatctcga gccacgcgaa
      781 tgtaggacgc caggtgaccc cagcacaaac gagggcggca tgagcgacga cgaacgcggc
      841 atcacgcggc gcgactttct ggagcgcacg ggcgcggctg ggctgggcgt ggcgctgggg
      901 ggtgtgctgc cagtcgcgtc gcgtcgtgag caacccggcc gctccgcgaa cgagacggtc
      961 gtcgtggccg tgatcgggcg caatggccga gggatggtgc acgcgcagaa cttcgcgcgg
     1021 cttcccaacg cgcaggtcgc atatctctgc gacgtggacg gcgcggtgct tcgcaaggcg
     1081 gcgggcgcga tccgtcagtc gcgaacggcg gtggcgatcg aggacttccg ccgcgcgctc
     1141 gacgacaagg ccgtggacgc cgtttcgatc gcgacgcccg atcactggca cacggcgatg
     1201 gcgatcctgg cgctgaaggc gggcaagcac gtctacctcg agaaaccgtg cggccacaat
     1261 gcgcgcgagg gcgagctgct gacggccgcg gcgaagaagt acgacaggca cgtccagcag
     1321 ggatcgcagc agcgctcggc ggcgcgcacg atcgaggcgc tgcagatggt cagggagggc
     1381 gcgatcgggg cgccgtatct cgtgcgcgcc tggtatgcga actcgcgcgg aggcatcggc
     1441 catggcaggc ccgcgcccgt gccgtccacg ctgaactacg agctgtggca gggtcccgct
     1501 cctcggacgc cgtaccgcga caacgtcgtg cactacaact ggcactggtt caagcggtgg
     1561 ggcacgggcg agatctgcaa caacggcacg cacgagatcg acatcgcacg gctcgcgctc
     1621 ggcgtcgact acccgacatc ggtgacgtcg agcggcggcc gctatcactt ccaggacgac
     1681 tgggagtttc ccgacaccca ggacgtgacc ttcgagttcg ccggtggaaa gcggatcctc
     1741 tggcagggac agagctgcaa cgccctcaag ccgttcgacc gcgggcgcgg caccgccatc
     1801 tacggcaccg ggggctcgat ggtgctcgat cgcgacggct accttcagta cgatctcaag
     1861 cagaagctgg tgaaggagag tctcgagccg aagcagggca acggcgtcga tctcatcggg
     1921 gacgacgccg ccacctggca gcacatggag aacttcctcg gcgcgatccg cactggcgag
     1981 acgctgcgcg cgcccatcac cgatggcgcc aggagcgtcc acctctgcca tctcggcaac
     2041 atcgcccagt acaccggccg cgcgcttcgc atcgatccgg ccaacggcca catcatggga
     2101 gacacggaag ccatgcgtca ttggtccagg agctacgcgc cggggtgggc gccgaccgcg
     2161 tgagccgcgt gcacacctta gctgccgcct cgctgctcac cctcgtcgcg agcacgacgg
     2221 cgctgcctgc gcagcggccg cgggagctcg agcggcacgt ggtgcgggtg cagggacatc
     2281 cgatcacggt gtggagcaag caccccggct tgccgacgcg gcgatcgctt gtgctcgtac
     2341 acggccggac ctggagcgcg cggccgaact tcgatctccg ggtgccggac agccgccgca
     2401 acgcctcgtt gatggatgct ctggtggcgc gcggctacag cgtgtacgcc atcgacctgc
     2461 gcggctatgg gggcacgccg cgagattcca cggggtggct cacgcccgac cgtgccgagc
     2521 gggacgtgag cgtcgtgctc gactccgtgt tcgagcgcga acgacagggg agcggcgtgc
     2581 gcatacgcgc cggcgcacag cgcccggtgc tgctgggcta ttcgcgcggt gcacaggtgg
     2641 cgatgctggt ggcgcagcgt cacccggaca agatcgccgg cctcgtgctg tacgggtacc
     2701 cggagcccgt tcccgctgcg acgtctggcg agcagacgcc ggcgacgccg ccgcgggctc
     2761 gcaccacggc ggccgccgcg ggcgaggact tcatctcgcc cgccgtcact ccccccgggg
     2821 tccgggacgc ctacgtgcga gcggccacgc tgacggattc catccggatg gactggaggg
     2881 acgaggctcg cttcctggag ctcgacccgg gacgagtgcg cgtg
//
LOCUS       DASSYW010000996         2545 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1484037, whole genome shotgun sequence.
ACCESSION   DASSYW010000996 DASSYW010000000
VERSION     DASSYW010000996.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2545)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2545)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2545
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1484037"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1815
                     /locus_tag="VFN38_15735"
     CDS             <1..1815
                     /locus_tag="VFN38_15735"
                     /EC_number="7.2.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF012892.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015662 - P-type ion transporter activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0019829 - ATPase-coupled monoatomic cation
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0043169 - cation binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation-translocating P-type ATPase"
                     /protein_id="HET9013275.1"
                     /translation="HALIRRLYAVETLGSVTTICSDKTGTLTQNRMTVVVLDMAGDRR
                     ELTGDGPDGDGGASLDGNPTLAVLLAGGALCTDAARADDGSLMGDPTETALVAAADRY
                     GLQKETLDELLPRVHELPFDSERKRMTTVHTLPERGGRAPEPLGGFLERDPVLAGADG
                     IAFTKGALDGLLTCCESAYVGGRTVALDDDLRARALAAGESLAAQGVRVLGVAMRPLA
                     DAAGAHEDESLETGLTLLGLEGMIDPARPEVRDAVATCGDAGVRAVMITGDHPLTAAA
                     MARDLGLATDDASTMTGAEIAQLGDEELTRAARRTAVYARVSPEDKIRIVGALRRDGE
                     VVAMTGDGVNDAPALTQADIGVAMGITGTDVTKEAADMVLRDDNFATIVSAVGEGRVV
                     FDNIRKYIRNILSGNLAEVTVMVLGPLAGMPIPLLPLQILWLNLVTDGLPAMALAVEQ
                     PEPDVMRRPPTALRESLFGADHGNRLVTRGAALTVLTFVPVYLLWDAGDAAWQTVLFT
                     TVAFAELAGSFAMRSERVSLARLGPLTNRALVGAVALTVALQLLVVVVPFPRDVLGLE
                     PLELKHWLLAAGIALAYLAFVEADKAVRRRRAAISATG"
     gene            1886..>2545
                     /locus_tag="VFN38_15740"
     CDS             1886..>2545
                     /locus_tag="VFN38_15740"
                     /inference="COORDINATES: protein motif:HMM:NF015747.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HET9013276.1"
                     /translation="MRISVLGTGVVGRALAGRSAELGHQVAVGTRDPQATLARTDSDS
                     MGNPPFSVWLEEHPDVELLPFADAAARGELIVNATSGGSSLEVLGLAGAGNLAGKVLV
                     DIANPLDFSEGFPPTLSVMDTDSLAEQIQRAFPDAKVVKTLNTLNAALMVDPAKLADA
                     DHTIFVSGDDAGAKATVTELLRSFGWQDVIDLGDLSSARGAEMLLPIWLRLMNTLGTA
                     AF"
BASE COUNT          349 a          934 c          925 g          337 t
ORIGIN      
        1 cacgcgctga tccggcgcct ctacgcggtc gagacgctcg ggtcggtcac gacgatctgc
       61 tccgacaaga ccgggacgct gacgcagaac cggatgacgg tcgtcgtgct cgacatggcc
      121 ggcgaccggc gcgagctgac cggcgacggg ccggacggcg acggcggggc ttcgctcgac
      181 ggcaacccga cgctggcggt gctgctggcg ggcggcgccc tgtgcaccga cgccgcccgc
      241 gccgacgacg ggtcgctcat gggagacccg accgagacgg cgctggtggc ggcggcggat
      301 cgctacgggc tccagaagga gacgctcgac gagctcctcc cgcgcgtgca cgagctgccg
      361 ttcgattcgg agcgcaagcg gatgaccacg gtgcacaccc tgcccgagcg cggcggccgg
      421 gcgcccgagc cgctcggcgg gttcctcgag cgcgaccccg tgctcgccgg cgccgacggc
      481 atcgctttca cgaagggcgc gctcgacggc ctgctcacct gctgcgagtc cgcctacgtc
      541 gggggccgga cggtcgccct cgacgacgac ctgcgcgccc gcgcgctcgc ggcgggcgag
      601 tcgctggcgg cgcagggggt gcgcgtgctc ggcgtggcca tgcgcccgct ggcggacgcc
      661 gcgggcgcac acgaggacga gtcgctcgag acgggcctca cactgctcgg gctcgagggg
      721 atgatcgacc cggcgcgccc cgaggtgcgc gacgccgtgg ccacctgcgg cgacgccggc
      781 gtgcgcgcgg tgatgatcac cggcgaccac ccgctcacgg cggcggcgat ggcgcgcgac
      841 ctcggcctcg ccaccgacga cgcgagcacg atgaccggcg ccgagatcgc gcagctcggc
      901 gacgaggagc tcacgcgggc cgcgcgccgg acggcggtgt acgcgcgcgt ctcgccggag
      961 gacaagatcc gcatcgtcgg cgcgctgcgc cgcgacggcg aggtggtggc gatgaccggc
     1021 gacggcgtga acgatgcgcc cgccctcacg caggcggaca tcggcgtggc catgggcatc
     1081 accggcaccg acgtgaccaa ggaggccgcc gacatggtgc tgcgcgacga caacttcgcg
     1141 acgatcgtga gcgcggtcgg cgagggccgc gtggtgttcg acaacatccg caagtacatc
     1201 cgcaacatcc tcagcggcaa ccttgcggag gtgacggtga tggtgctggg gccgctcgcc
     1261 gggatgccga tcccgctgct gccgctccag atcctgtggc tcaacctcgt caccgacggg
     1321 ctgcccgcga tggcgctggc ggtggagcag cccgagcccg acgtgatgcg gcggccgccg
     1381 acggcgctgc gcgagagcct gttcggcgcc gaccacggca accgcctcgt cacgcgcggc
     1441 gcggcgctca ccgtgctcac cttcgtgccc gtgtacctgc tgtgggacgc gggcgacgcg
     1501 gcctggcaga ccgtcctctt caccacggtc gcgttcgccg agctcgccgg cagcttcgcg
     1561 atgcgctcgg agcgcgtgtc gctggcccgc ctcgggccgc tcaccaaccg cgcgctcgtg
     1621 ggagcggtgg cgctgacggt ggcgcttcag ctgctcgtgg tggtggtgcc gttcccgcgc
     1681 gacgtgctcg gcctggagcc gctcgagctg aagcactggc tcctggcggc gggcatagcg
     1741 ctcgcctacc tcgcgttcgt ggaggcagac aaggcggtcc gcaggcggcg ggcggccatc
     1801 tccgccaccg gctgagagga ctggtagaca gaccggtctg tctgctacct tcgagcctcc
     1861 agatcttcca acccaaggag cctcgatgcg catctcagta ctcggaaccg gcgtggtagg
     1921 ccgcgccctg gccggccggt ccgcggagct cggccaccag gtggccgtcg gcacgcgcga
     1981 cccgcaggcc acgctggccc gcaccgacag cgactcgatg ggcaacccgc cgttcagcgt
     2041 ctggctcgag gagcacccgg acgtcgagct gctccccttc gccgatgccg ccgcgcgcgg
     2101 cgagctgatc gtgaacgcca cctcgggcgg cagctccctc gaggtcctcg ggctcgcggg
     2161 ggccggcaac ctggccggca aggtgctcgt cgacatcgcc aacccgctgg acttctcgga
     2221 gggcttcccc ccgaccctgt ccgtcatgga caccgactcg ctcgccgagc agatccagcg
     2281 cgcgttcccc gacgccaagg tggtgaagac gctcaacacg ctgaacgcgg ccctgatggt
     2341 ggacccggcc aagctcgccg acgccgatca cacgatcttc gtcagcggcg acgacgccgg
     2401 cgccaaggcc accgtgaccg agctgctgcg cagcttcggg tggcaggacg tcatcgacct
     2461 cggcgacctg agctcggccc gcggcgccga gatgctgctg ccgatctggc ttcggctcat
     2521 gaacacgctg ggtacagccg ccttc
//
LOCUS       DASSYW010000997         2587 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_489266, whole genome shotgun sequence.
ACCESSION   DASSYW010000997 DASSYW010000000
VERSION     DASSYW010000997.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2587)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2587)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2587
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_489266"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(109..969)
                     /locus_tag="VFN38_15745"
     CDS             complement(109..969)
                     /locus_tag="VFN38_15745"
                     /EC_number="2.4.2.1"
                     /inference="COORDINATES: protein motif:HMM:NF006054.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004731 - purine-nucleoside phosphorylase
                     activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HET9013277.1"
                     /translation="MTTFTTPASTFDASAHTLETVTAAADVVRARFAGVPDAAIVLGT
                     GLGGLAREIAVETAIDYADIPGFAHSSVESHAGRLLCGALGGRSVIAMQGRFHRYEGY
                     SLQQVTFPVRVLRALGAETLVVSNACGGMNPLWAAGDLMLIADHINLLGDNPLIGPND
                     DRLGVRFPDMSAPYDAALRALAREVAATLGIPLREGVYVAVAGPNLETRAEYRMLRAL
                     GADVVGMSTVPEVIVARHAGMQVLGLSIITDQCLPDALEPADMATIVETAGRAEPKLT
                     ALVRGVLERL"
     gene            complement(966..1466)
                     /locus_tag="VFN38_15750"
     CDS             complement(966..1466)
                     /locus_tag="VFN38_15750"
                     /inference="COORDINATES: protein motif:HMM:NF016959.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DivIVA domain-containing protein"
                     /protein_id="HET9013278.1"
                     /translation="MDETFHLTPLDVRRYDFGKAMRGYDPKRVEQFREQVAEELERLT
                     RSLVDLDTKAKGFHEQLRAFRERDKALNDALVSAQQLRNEIRESSEREASLIVREARS
                     KGEEQLEAARAEVRRLESHLQELERARRAHLAQLRQMAERQLAEITAAEQETLPGLAG
                     ARAEQG"
     gene            complement(1466..2149)
                     /locus_tag="VFN38_15755"
     CDS             complement(1466..2149)
                     /locus_tag="VFN38_15755"
                     /inference="COORDINATES: protein motif:HMM:NF013345.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HET9013279.1"
                     /translation="MPFQDLPARLAAVREAIERARQKGGFGQAVTIVAVTKTYGPEAP
                     VAAWQAGLRDVGENKVQEAVAKMAQVDAPLRWHLIGHLQRNKVKQLDGFQLVHSMDSA
                     RLADALAAHGAARGRPLEVLVQVNVSGEDTKGGYAPSMLPAEAERLGTLSGLVVRGVM
                     TMAPFDADEATLRAVFAGARRCGELLRAAGHPATELSMGMSGDYEIAVEEGATLVRLG
                     TVLFGARPA"
     gene            complement(2161..>2587)
                     /locus_tag="VFN38_15760"
     CDS             complement(2161..>2587)
                     /locus_tag="VFN38_15760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013280.1"
                     /translation="AWYQAELVRRTGLRWSDDAVAGATWQHEQIAAQLASAARAAGRP
                     VAASPAVTAAERALLGSAWSLEGIVYRARLPRGGSVAPAAVDVARSAPWALRYVPGGP
                     ASRLVDDVAETMLGYLACPLLRDPATPTRDSLEVRCNLR"
BASE COUNT          348 a         1007 c          849 g          383 t
ORIGIN      
        1 cgaacaggcc ttcgtcgcgc cagcgctcca ggagctccag ctccagcgtg tccggcgcca
       61 ggtcgtccgg cacccgcgcg aactgtcggt tcgtcacgcc ggcggccgtc acaggcgttc
      121 cagcacgccg cgcacgagcg cggtgagctt cggctcggcg cgccccgccg tctccacgat
      181 cgtcgccatg tccgccggct ccagcgcgtc cggcaggcac tggtcggtga tgatcgacag
      241 ccccagcacc tgcattccgg cgtgccgcgc cacgatcacc tcgggcaccg tgctcatccc
      301 caccacgtcg gccccgagcg cgcgcagcat ccggtactcg gcgcgcgtct cgagattcgg
      361 ccccgccacg gcgacgtaca cgccttcgcg caacgggatg ccgagcgtcg cggcgacctc
      421 gcgcgcgagc gcgcgcagcg ctgcgtcata cggcgccgac atgtcgggga agcgcacgcc
      481 gagccggtcg tcgttcggcc cgatcagcgg attgtcgccg agcaggttga tgtggtcggc
      541 gatcagcatc aggtcgccgg cggcccacag cggattcatg ccgccgcagg cgttcgacac
      601 gaccagggtc tccgcgccga gcgcgcgcaa cacgcgcacc ggaaaggtga cctgttgcag
      661 cgagtagccc tcgtagcggt ggaagcggcc ctgcatggcg atcacgctgc gcccacccag
      721 cgcgccgcag agcagacgcc cggcgtgact ctccacgctg gagtgcgcga accccggaat
      781 gtcggcgtag tcgatcgccg tctccaccgc gatctcgcgc gccaggccgc ccagcccggt
      841 gccgagcacg atggcggcgt cggggacgcc ggcgaatcgc gcgcggacca cgtcggccgc
      901 cgctgtcacc gtttccagtg tgtgcgcgct cgcatcgaag gtcgatgcgg gcgtggtgaa
      961 cgtcgtcatc cctgctccgc ccgcgccccg gcgagccccg gcagcgtctc ctgctccgct
     1021 gccgtgattt cggcgagctg ccgctccgcc atctggcgga gctgcgccag gtgggcgcgc
     1081 cgcgcgcgct ccagctcctg gaggtggctc tcgaggcggc gcacctcggc gcgcgcggct
     1141 tcgagctgct cctcgccctt cgagcgcgcc tcgcgaacga tcagcgacgc ctcgcgctcg
     1201 gaggactcgc ggatctcgtt gcgcagctgc tgcgcgctca cgagcgcatc gttgagcgcc
     1261 ttgtcgcgct cgcggaaggc gcggagctgc tcgtgaaagc ccttggcctt ggtgtccagg
     1321 tccacgagcg accgggtcag ccgctccagc tcctcggcca cctgctcgcg aaactgctcc
     1381 acacgcttcg ggtcgtagcc acgcatggcc ttcccgaagt cgtagcgtcg cacgtcgagc
     1441 ggcgtgagat gaaaggtctc gtccatcagg caggcctcgc tccgaacagt accgtgccga
     1501 ggcgcaccag ggtggcgccc tcttccaccg cgatctcgta atctcccgac atgcccatgc
     1561 tcagctccgt cgccggatgt cccgctgcgc gcagcagctc gccgcatcgc cgcgcgccgg
     1621 cgaagaccgc ccgcagggtc gcctcgtcgg cgtcgaacgg tgccatcgtc atcacgccgc
     1681 gcacgaccaa accggacagt gtccccaatc gttccgcctc ggcagggagc atcgagggcg
     1741 cgtagccgcc cttcgtgtcc tcgccggaga cgttcacctg caccaacacc tcgagcggcc
     1801 gcccgcgtgc cgccccatgc gccgccagcg cgtcggccag ccgcgcgctg tccatcgagt
     1861 gcaccagctg gaaaccgtcg agctgcttga ccttgttgcg ctgcaggtgc ccgatgagat
     1921 gccaacggag cggcgcgtcg acctgcgcca tcttcgccac cgcctcctgc accttgtttt
     1981 ccccgacgtc gcgcagtcca gcctgccatg ccgcgactgg ggcctccgga ccgtacgtct
     2041 tcgtcaccgc gacgatcgtg accgcctgtc cgaacccgcc cttctgccgc gcccgttcga
     2101 tcgcttcccg taccgcggcc agccgtgccg gcaggtcctg aaatggcata acacgcgaat
     2161 ttaccgaagg ttgcacctca cctcaagtga gtcccgggtc ggcgtggcgg ggtcgcgcag
     2221 cagtggacag gccagatagc cgagcatggt ctccgcgacg tcgtccacga gtcgggaggc
     2281 gggtccgccc ggtacgtacc gcagcgccca gggcgcgctc cgcgcgacgt ccaccgcggc
     2341 cggtgcgacg cttccccccc tcggcagccg ggcgcggtac acgatcccct ccagactcca
     2401 tgcgctgccg agcagggcgc gctcggccgc cgtgaccgcc ggtgacgccg cgaccggccg
     2461 ccccgcggcg cgggcggcgc tcgcgagctg cgcggcgatc tgttcgtgct gccacgtcgc
     2521 gccggccacc gcgtcgtcgc tccaccgcag gcccgtccga cggacgagct ccgcctggta
     2581 ccacgcg
//
LOCUS       DASSYW010000998         2518 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1395883, whole genome shotgun sequence.
ACCESSION   DASSYW010000998 DASSYW010000000
VERSION     DASSYW010000998.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2518)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2518)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2518
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1395883"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(128..991)
                     /locus_tag="VFN38_15765"
     CDS             complement(128..991)
                     /locus_tag="VFN38_15765"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HET9013281.1"
                     /translation="MAFLRFFRSGGALAWSLVGGVLLSMAASSALFARTALVRHERDV
                     SRIVFNDNVQLLDEVRKSSGAVDDSLATVTSGGDAGTSTMKPYIVVSIEDHRLWYKLR
                     DSILFTTQVATGSGRVLESGSAGAQWKFETPRGRLVVQAKEEDPAWIPPDWHFVEQAR
                     KRGLGIVRLNRGQSVPAGDGSEIRVSGAEVVRRYPDGRETPVGEGKEGREIVAGGNLL
                     IPPFGTNQRKFKGVLGTHRLVLGDGYALHGTDKPESIGRSVSHGCGRLRNEDIAKLYD
                     MVEVGTPVYIY"
     gene            complement(1044..1742)
                     /locus_tag="VFN38_15770"
     CDS             complement(1044..1742)
                     /locus_tag="VFN38_15770"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HET9013282.1"
                     /translation="MRTDRRRVGWREFRRAYPTLVATMTVAILVFLAADVWLLMRYRR
                     YVRETAELRASMTDVERRRADALLSQEQNRVKVMVELFKRQAKLDTTLHLSVSLGSGV
                     MYLERDGALLREMPITVGPEKRVGTPPDTLHIATPRGKRSIERLLGEQDAWQVPGWVY
                     QDRGIAPETTAINGALGPAAITLDGGTVIYSLPSVGPLNDSAYVLPGGIRVRAEDLKA
                     IAPNLRPGVPVYFY"
     gene            1907..>2518
                     /locus_tag="VFN38_15775"
     CDS             1907..>2518
                     /locus_tag="VFN38_15775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894269.1"
                     /note="catalyzes the interconversion of 2-phosphoglycerate
                     and 3-phosphoglycerate; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /protein_id="HET9013283.1"
                     /translation="MAASSRPTPVVLLVLDGWGYRAEKDGNAIAMATVPTWDRLWARA
                     PRTLLEASGEAVGLPCGQIGNSEVGHLNLGAGRVVKQDLVRISQAIADGSFFTNPVFV
                     DACRQVKKNGGTLHLVGLIGTGGVHAIDTHLLALLDLAEREGVPRVAVQVMLDGRDTM
                     PRSGLGYLEQLVRDAAGRAVIGSVGGRYFGMDRDHRWERTGKWY"
BASE COUNT          405 a          864 c          836 g          413 t
ORIGIN      
        1 ggtcagcgca acttatccat cgaggagacg aacggaagtc gggaaaggca acgaacgtcg
       61 tattggactg accgctcagc cagaatcgcg catctcgttg tcaaccgtac agttcggtaa
      121 tgacgactca gtaaatgtag accggagtgc cgacctcgac catgtcgtag agcttcgcga
      181 tgtcctcgtt tcgcagtcgc ccgcagccgt gactgaccga gcggccaatg gactccggtt
      241 tatcggtgcc atgaagggcg tagccgtcgc cgaggacgag gcggtgggtc cccagcaccc
      301 ccttgaactt gcgctggttg gtgccgaagg gcgggatcag aaggttgccg ccagcaacga
      361 tctcccgccc ctccttcccc tctccgaccg gcgtctcgcg gccatccgga tagcggcgta
      421 cgacctccgc tccggagacc ctgatctccg acccatcccc cgccggcacg gactggccgc
      481 gattgaggcg tacgatcccg agcccgcgct tccgtgcctg ttccacgaag tgccagtccg
      541 gcggaatcca ggccggatcc tcctccttgg cctgcacgac cagtcgaccg cgcggcgtct
      601 cgaacttcca ctgcgcgccg gcgctgccgc tctcgagcac cctgccgctc cccgtcgcca
      661 cctgcgtcgt gaacaggatg ctgtcgcgca gcttgtacca gagccggtgg tcctcgatgc
      721 tcacgacgat gtagggcttc atcgtggagg ttccggcgtc gcctcccgag gtgaccgtcg
      781 ccaggctgtc gtccaccgcg ccgctcgact tcctcacctc gtcgagcagc tggacgttgt
      841 cgttgaacac gatccggctc acgtcgcgct cgtgccggac gagcgccgtg cgtgcgaaga
      901 gcgccgagct ggccgccatc gacaggagga cgccccccac cagactccag gcgagcgcgc
      961 cgccactgcg gaagaatctc agaaaagcca tgactgcccg tgaacggtga ccctgaaccc
     1021 tgaaccccta ccagcgttga cgactagtag aagtagactg gtacaccggg gcgcaggttg
     1081 ggtgcgatcg ccttcagatc ttcggcacgc acgcgaattc cgcctggcag cacgtacgcc
     1141 gagtcattga gcggaccgac gctcggaagc gagtagatca cggtaccgcc gtcgagggtg
     1201 atggccgcgg ggccgagggc gccgttgatc gcggtcgttt ccggcgcgat cccacgatcc
     1261 tgatacaccc agcccggcac ctgccacgcg tcctgttcgc cgagcagccg ctcgatcgac
     1321 cgcttgccac gcggcgtggc gatgtggagg gtgtccggcg gagtgccgac acgcttctct
     1381 ggtcccaccg tgatcggcat ctcgcgcagc agcgcgccgt cccgctcgag gtacatcacg
     1441 ccgctgccga gcgacacgct cagatgaagc gtcgtgtcga gcttcgcctg ccgcttgaag
     1501 agctccacca tcaccttgac gcgattctgc tcctgcgaga gcagggcatc ggcgcgccgg
     1561 cgctccacgt cggtcatcga ggcgcgcagc tcggccgtct cgcgcacgta ccgccggtaa
     1621 cgcatcagca gccagacgtc tgccgccagg aacaccagga tggcgaccgt catcgtggcc
     1681 acgagcgtcg gataggcgcg gcggaactca cgccagccga ctcggcggcg atcggtgcgc
     1741 atgcgcgtgg cgtcctttcg gcgcccagga tcccaatcgt cgtgtggagg cgggttggtc
     1801 atgtcgtggt ggaagtggtc ggggcacgcg cgggcagata catttccggc gtccaagctc
     1861 cctccggcgc gcccgcgcgc aagtcccgtt tcgtcttccc tcgtcaatgg cagcgtcctc
     1921 gcgtcccacg cccgtcgttc tcctggttct cgatggctgg ggctatcgcg ccgagaagga
     1981 cgggaacgcg atcgcgatgg caacggtgcc gacgtgggac cgcctgtggg cgagagcgcc
     2041 acggaccctg ctggaggcgt cgggcgaggc agtcggcctg ccctgcggcc agatcggcaa
     2101 cagcgaagtg ggacatctca acctgggcgc cggccgcgtg gtgaagcagg acctcgtgcg
     2161 catctcgcag gcgatcgccg acggcagctt cttcacgaac ccggtgttcg tggatgcgtg
     2221 ccgccaggtg aagaagaacg gcggcacgct gcacctggtc ggcctgatcg gcacgggggg
     2281 cgtgcatgcc atcgacacgc acctcctcgc gctgctcgac ctggccgagc gggaaggcgt
     2341 cccgcgggtg gccgtgcagg tgatgctcga cgggcgcgac acgatgccgc gctccgggct
     2401 gggctacctg gagcagctcg tgcgcgacgc cgcggggcgc gcggtgatcg gcagcgtggg
     2461 tggccgctac ttcgggatgg accgcgacca ccgctgggag cgcaccggca agtggtac
//
LOCUS       DASSYW010000999         2153 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_894494, whole genome shotgun sequence.
ACCESSION   DASSYW010000999 DASSYW010000000
VERSION     DASSYW010000999.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2153)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2153)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2153
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_894494"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(84..1457)
                     /locus_tag="VFN38_15780"
     CDS             complement(84..1457)
                     /locus_tag="VFN38_15780"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HET9013284.1"
                     /translation="MSTTRVPSVLIVDDETGILESLGILLRNAGFATHTARGGRAGLE
                     QLSALQPDIVLSDVRMPDVGGVEILAAARQQDPDTPVILMTAQATLQSAMQAVNEGAF
                     YYIQKPFRNDELLAILKRAAEHRELRVENRSLKQEIKRREGPAGSRPVGNSRSWLDVL
                     RLAETVAPTESTVLIQGESGTGKEVIARYIHELSARAERSFASINCGALPESLLESEL
                     FGHVKGSFTGAIKDKSGLFTAAAKGTFFLDEIGETTPATQVKLLRVLQHREVIPVGAT
                     DPQPIDVRLIAATNRELEEEIRRGSFRTDLYYRLNVIALHLPTLRQRADDIPLLSEHF
                     LARIADLRQEAQKALSASTLDALVNYSWPGNVRELENALERAVILTPGDEIQPSALPE
                     RVTQRVSEPLVAERTPANPTLEAVERAYIMWVLQSESGNKSRAADVLGIDPSTLYRKL
                     SRYGVEA"
     gene            complement(1454..>2153)
                     /locus_tag="VFN38_15785"
     CDS             complement(1454..>2153)
                     /locus_tag="VFN38_15785"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HET9013285.1"
                     /translation="IKNPLASIRSACEQLSRSSFSGVDERTLTHLVMRESDRLSRLLS
                     EFLDFARVRVARRERIDVAQLTAGAVRLALAHPDRPAGTTVVCAVREGEFLVEGDDDL
                     LHRAVFNLLLNAIQVSPPDGEVRLEVAAARPDQLDFGPTFADGGIAVSVIDAGPGIAP
                     EIRERLFDPFFTTRPGGSGLGLAVVHRAIDAHRGLVFLDTGAAGTRFTVVLPRFAHVA
                     RGASYGTLPATVLT"
BASE COUNT          282 a          743 c          813 g          315 t
ORIGIN      
        1 ccgggcgggg ggcatcgcgg ggggcatcgc ggggggcgcg acgcggggct ccggcgccgg
       61 ggagggggac cgcgcggggg cgctcatgct tccactccgt agcgggacag cttgcggtac
      121 agcgtcgagg ggtcgatccc gagcacgtcg gccgcgcggc tcttgttgcc gctctcgctc
      181 tgcagcaccc acatgatgta ggcgcgctcc accgcttcca gcgtcgggtt ggccggcgtc
      241 cgctcggcga cgagcggctc gctcacgcgc tgcgtcaccc gctcggggag cgcggagggc
      301 tggatctcgt cgcccggcgt gaggatcacc gcgcgctcga gggcgttctc cagctcgcgc
      361 acgtttccgg gccagctgta gttcaccagc gcgtccagcg tgctcgccga cagcgccttc
      421 tgcgcttcct gccggaggtc ggcgatgcgg gcgaggaagt gctcggacag cagggggatg
      481 tcgtcggcgc gctgccgcag cgtcggcagg tgcagggcga tgacgttgag gcggtagtac
      541 aggtcggtgc ggaaggagcc gcggcggatc tcctcctcca gctcgcggtt cgtcgccgcg
      601 atgaggcgca cgtcgatcgg ctgcggatcg gtggcgccca cggggatcac ctcgcggtgc
      661 tggagcacgc ggagcagctt cacctgcgtc gcgggggtgg tctcgccgat ctcgtccagg
      721 aagaaggtgc ccttggccgc cgcggtgaac aggccgctct tgtccttgat ggcgccggtg
      781 aacgatccct tcacgtggcc gaacagctcg ctctcgagca ggctctcggg cagcgcgccg
      841 cagttgatgg acgcgaacga ccgctcggcg cgcgccgaca gctcgtggat gtagcgcgcg
      901 atgacttcct ttccggtgcc cgactcgccc tggatgagca ccgtggactc ggtgggggcc
      961 acggtctcgg cgagacgcag cacgtccagc cagctccggc tgttgcccac cggccgcgag
     1021 cccgcgggcc cctcgcgccg cttgatctcc tgcttgagcg accggttctc gacgcgcagc
     1081 tcgcggtgct cggccgcgcg cttcaggatc gccagcagct cgtcgttgcg gaacggcttc
     1141 tggatgtagt agaacgcgcc ctcgttcacc gcctgcatcg ccgactgcag cgtggcctgc
     1201 gccgtcatca ggatcaccgg ggtgtcggga tcctgctgcc gcgccgcggc gaggatctcc
     1261 accccgccca cgtcgggcat gcgcacgtcg gacagcacga tgtccggctg gagcgccgag
     1321 agctgctcca gtccggcgcg cccgccgcgc gcggtgtgcg tggcgaatcc ggcgttgcgc
     1381 agcaggatgc cgagcgactc caggatcccc gtctcgtcgt cgacgatgag gaccgaggga
     1441 acgcgagtag tgctcacgtg aggaccgttg ctgggagggt gccgtacgag gcgccgcgcg
     1501 cgacgtgcgc gaagcgggga aggacgacgg tgaagcgggt gccggcggcg ccggtgtcga
     1561 ggaacaccag cccgcgatgt gcgtcgatgg cgcggtgcac cacggcgagc ccgagcccgc
     1621 tgccgccggg ccgcgtggtg aagaaggggt cgaacagccg ctcgcggatc tcgggggcga
     1681 tccccggccc cgcgtcgatc acgctcaccg cgatgccccc gtcggcgaag gtggggccga
     1741 agtccagctg gtcggggcgc gcggcggcca cctcgagccg gacctcgccg tcgggcggcg
     1801 acacctggat ggcgttcagc aggaggttga acaccgcgcg gtggagcagg tcgtcgtcgc
     1861 cctccacgag gaactcgccc tcgcggacgg cgcacaccac cgtcgtcccg gccggtcggt
     1921 cggggtgcgc cagcgccagc cgcaccgccc ccgccgtgag ctgcgcgacg tcgatccgct
     1981 cgcgccgcgc cacgcgcacg cgcgcgaagt cgaggaactc gctgagcagc ctgctcagcc
     2041 ggtcggactc gcgcatcacg aggtgggtga gcgtccgctc gtccaccccg ctgaacgacg
     2101 accgggagag ctgctcgcag gcgctgcgga tggaggcgag ggggttcttg atc
//
LOCUS       DASSYW010001000         2574 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_654975, whole genome shotgun sequence.
ACCESSION   DASSYW010001000 DASSYW010000000
VERSION     DASSYW010001000.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2574)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2574)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2574
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_654975"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..882)
                     /locus_tag="VFN38_15790"
     CDS             complement(<1..882)
                     /locus_tag="VFN38_15790"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF021127.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0045227 - capsule polysaccharide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CapA family protein"
                     /protein_id="HET9013286.1"
                     /translation="MAKINGRTLGAAACAVMTMVAVGLAAGRQAAPADTLTITLTGQS
                     MLRSDLRASAPKAMPVIAGLLKGDVVFTNFEGAIALPGQSASEGRGFLAPAAAFDALK
                     TLGFNLLSLSNNHAFDLQAAGIRNTIAEANRRQIVHAGIGNTLSEASAPAYLKTPKGT
                     VALVSSASGLIVAGGMATATSPGVNELRIKAGDKDNTAREDLPGAGPNVPNAEDSERI
                     LQSIREARQKADLVIVYQHNHVFSNRAFSSVFTYGLAERLAPNAWLKKWVRAEIDAGA
                     DIVVMHGAPLLHGVEFYR"
     gene            926..1414
                     /locus_tag="VFN38_15795"
     CDS             926..1414
                     /locus_tag="VFN38_15795"
                     /inference="COORDINATES: protein motif:HMM:NF015862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-binding protein"
                     /protein_id="HET9013287.1"
                     /translation="MRVLSILLLLPAVALAQQGAKPAAGLISEKVLPLDMAVDIARAA
                     VDKCRADGYRTTVAIVDAGGNLKLSVRDDGTSPHTVEVARKKAYTALIYRRASMETAK
                     LWATQVPPPSIDGTIALGGGFPIRAGDQVVGAIGVSGAPGQDKDEACANAGLAAVAAR
                     LK"
     gene            1415..1924
                     /locus_tag="VFN38_15800"
     CDS             1415..1924
                     /locus_tag="VFN38_15800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013288.1"
                     /translation="MHTWRQAFGRALWIAIVLAAATAYAQSPPATPQPPIAGTWKLNP
                     EKSGVQVPPDYVEIRQYRLRADGYLVGLLFTGNSRGLRYLQFTAKSDGKDYPEHSDQI
                     VADMIAAGTPTPRTYAETKIDEYTTAWIDKVNGKITAQGKKIVSKDGQTLTITVDGQT
                     AIRVYDRQP"
     gene            complement(1925..>2574)
                     /locus_tag="VFN38_15805"
     CDS             complement(1925..>2574)
                     /locus_tag="VFN38_15805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013289.1"
                     /translation="GKPDLSGVWMPPYVPDMTQNRPNQRGQADLPFTPAGLANWKEYD
                     AASGDYTGSCFPFGLQRSVNAPYPFQIMQDERQIALLFEINTWHHVIPFAREFPKQAA
                     DNPTWYGYSIGRWEGDTLVVESRGFNGYTRLDTIGHPHSDALQLTQTFTRVDRRSMAY
                     TVTVNDPKTYTKPWTNERTFRLMDTPLMEYSCEENNRSLWQGRIKGWTPPWSKPQ"
BASE COUNT          415 a          878 c          872 g          409 t
ORIGIN      
        1 gcgatagaac tccacgccgt gcagcagcgg ggcgccgtgc atcaccacga tgtccgcgcc
       61 ggcgtcgatc tcggcgcgca cccatttctt cagccacgcg ttcggggcca ggcgctcggc
      121 caggccgtag gtaaagaccg acgagaaggc gcgattgctg aacacgtggt tgtgctggta
      181 aacgatgacg aggtccgcct tctgccgcgc ctcgcgaatg ctctgcagga tccgctcgga
      241 gtcctcggcg ttcggcacgt tgggccccgc ccccggcagg tcctccctgg cggtgttgtc
      301 cttgtcgccc gccttgatcc gcagctcgtt gacgccgggc gacgtggcgg tggccatgcc
      361 gcccgccacg atgagcccgg acgcgctcga gacgagcgcc accgtgccct tcggcgtttt
      421 cagataggcg ggcgccgacg cttcgctgag ggtgttgccg atgccggcgt gcacgatctg
      481 acggcggttc gcttcggcga tcgtgttgcg aatgccggcg gcctgcagat cgaacgcgtg
      541 gttgttggac agcgacagca ggttgaagcc gagcgtcttg agcgcgtcga acgccgcggc
      601 cggcgccagg aagccgcgcc cctcgctcgc gctctgaccc ggcagcgcaa tcgccccctc
      661 gaagttcgtg aaaacgacgt cacccttcaa gaggccggca atcaccggca tcgctttggg
      721 cgccgacgcg cgcaggtccg agcggagcat cgactgaccc gtgagggtaa tcgtcagcgt
      781 gtccgccggc gcggcctgcc ggccggccgc aaggcccacg gccaccatcg tcatgaccgc
      841 acacgcggcg gcccccagcg tccgaccgtt gatctttgcc atcgcgcgaa agtgtatcct
      901 gacggccgcc gaaaggagtc ttcgcatgcg tgtgctctcg atcctgcttc tactcccggc
      961 tgtcgcgctg gcgcagcagg gcgccaagcc cgccgccggg ctcatcagcg aaaaggtgct
     1021 gccgctggac atggcggtag acatcgcccg ggccgccgtg gacaagtgcc gcgccgacgg
     1081 ctaccggacc acggtggcga tcgtcgacgc cggcggcaac ctcaagctct cggtgcgcga
     1141 cgacggcacc agcccgcaca cggtggaagt ggcgcggaag aaggcctaca ccgcgctgat
     1201 ctaccgccgg gcgtcgatgg agacggccaa actgtgggcc acgcaggtgc cgccaccgtc
     1261 gattgacggc accatcgcgc tcggaggcgg cttccccatc cgcgccggcg atcaggtggt
     1321 gggcgccatc ggcgtcagcg gcgcgccggg gcaggacaag gacgaggcgt gcgccaacgc
     1381 gggcctcgcg gcggtcgccg cccggctgaa gtagatgcac acgtggcggc aggctttcgg
     1441 gcgtgccctc tggatcgcga tcgtgctggc ggcggccacc gcctacgccc agtcaccgcc
     1501 agccacgcca cagccgccga ttgccggcac ctggaagctc aatcccgaga agtcgggcgt
     1561 ccaggtgccg cccgattacg tggagatccg gcagtaccgg cttcgcgccg acggctatct
     1621 cgtggggctg ctcttcaccg gcaactcgcg cggcctgcgc tatctgcagt tcacggcgaa
     1681 gagcgacggc aaggactacc cggagcactc cgaccagatc gtcgcggaca tgatcgccgc
     1741 cggtacgccg acgccgcgga cctacgcgga gacgaagatc gacgagtaca cgaccgcgtg
     1801 gatcgacaag gtcaacggca agatcacggc gcagggcaag aagatcgtgt cgaaggacgg
     1861 ccagacgctg acgatcaccg tggacggaca gacggcgatt cgcgtctacg accggcagcc
     1921 gtaatcattg cggcttggac cagggcggcg tccacccctt gatgcgcccc tgccagaggc
     1981 tccggttgtt ctcctcgcag gagtactcca tcagcggcgt gtccatcaga cggaacgtgc
     2041 gctcgttggt ccacggcttc gtgtaggtct tgggatcgtt caccgtcacc gtgtacgcca
     2101 tgctccgccg atcgacgcgc gtgaacgtct gcgtcagctg cagcgcatcg ctgtgcggat
     2161 ggccaatcgt gtccaggcgc gtgtaaccgt tgaagccgcg cgactcgacc accagcgtgt
     2221 cgccctccca gcggccgatc gagtagccgt accaggtggg gttgtcggcc gcctgcttcg
     2281 ggaactcgcg ggcgaacggg atcacgtggt gccaggtgtt gatctcgaag agcagcgcga
     2341 tctgccgctc gtcctgcatg atctggaacg gatacggcgc gttgacggag cgctgcagtc
     2401 cgaacgggaa acagctcccc gtgtagtcgc cgctcgcggc gtcgtactcc ttccagttgg
     2461 cgagcccggc cggcgtaaac ggcaggtcgg cctggccgcg ctgattgggc cggttctgcg
     2521 tcatgtccgg cacgtaaggc ggcatccaga cgccgctcaa atcaggcttg ccgt
//
LOCUS       DASSYW010001001         2707 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_747459, whole genome shotgun sequence.
ACCESSION   DASSYW010001001 DASSYW010000000
VERSION     DASSYW010001001.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2707)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2707)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2707
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_747459"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1053
                     /gene="ligA"
                     /locus_tag="VFN38_15810"
     CDS             <1..1053
                     /gene="ligA"
                     /locus_tag="VFN38_15810"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF005932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003911 - DNA ligase (NAD+) activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HET9013290.1"
                     /translation="LLDIQVNVGRTGSLNPFAVLEPVEIGGTTVQLATLHNFDLIHAK
                     DLRVGDVVQVKRAGDVIPQIIGPVPDKRDAKNPPRPYKPPTRCPSCRTPVERDEEEAA
                     TYCPNVACPARQLEAIVHFASRGAMDIRGLSYARIEQFIAASLVHDVADLYDLTVAQL
                     TALERFAEKSAENLVEALAASKQQPLSRLLFGLGIRHVGQTAAQLLARHFGTMDALAA
                     ATADDILAIRGIGEGIALAVVAFFHDASARGLVRKLAARGLTMSEPKSVSAGGAFKGM
                     TFVVTGTLPTLSRTEATELIESNGGRVTSGVSKATTVVVVGEDAGSKLDKARTLGVET
                     IDETELLRRAASAAAS"
     gene            1107..1661
                     /locus_tag="VFN38_15815"
     CDS             1107..1661
                     /locus_tag="VFN38_15815"
                     /inference="COORDINATES: protein motif:HMM:NF014845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="V4R domain-containing protein"
                     /protein_id="HET9013291.1"
                     /translation="MTIDLRGTGMLAITRDALIALRAALMRDTGPAGAGYLQEAGYAG
                     GGALFEAFRHWLATRGSGAPEALSVDDFQREATEFFRHAGWGSLHVGALHDTVATLDT
                     DDWVEATPESPLDQVGCSFSAGMFADFFGRVADAPLAVMEVECRSTGAARCRFLLGSA
                     DVMQAVYDGMSQGLGYEDAVSASA"
     gene            complement(1665..2192)
                     /locus_tag="VFN38_15820"
     CDS             complement(1665..2192)
                     /locus_tag="VFN38_15820"
                     /inference="COORDINATES: protein motif:HMM:NF012383.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyltransferase family protein"
                     /protein_id="HET9013292.1"
                     /translation="MSPRRTTAEPSKGVFEVEWPLFGELSRALALKVVRSYDPEMIVG
                     IATAGVVPGAVIAAILDREFHSIVVSRRYQTDAVRETPAIFGAVPSGVRGKRVLLVDE
                     TCDSGETMRLAVSAIVNAGAAEVRTAVAFKTGPYEPDYHALATESTIVLPWDREVLFQ
                     GELVPNPLYRETIGG"
     gene            2389..>2707
                     /locus_tag="VFN38_15825"
     CDS             2389..>2707
                     /locus_tag="VFN38_15825"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HET9013293.1"
                     /translation="MSRLLGGKSDGRMKPQRLDYLNEALALERQGDFDAALTSYRLAL
                     RDHPQDPRILQNMAIAFSRTGRLNEAVSAYRRALELDPELSGAHYGLAFLHLKRGDHA
                     EAAA"
BASE COUNT          391 a          966 c          956 g          394 t
ORIGIN      
        1 ctgctcgaca tccaggtgaa cgtcggccgc accggctcgc tcaatccgtt cgccgtgctc
       61 gagccggtgg agatcggcgg caccaccgtg cagctcgcga cgctgcacaa cttcgatctc
      121 atccacgcga aggacctgcg cgtcggcgac gtcgtgcagg tgaagcgcgc gggcgacgtg
      181 atcccgcaga tcatcgggcc ggtgccggac aagcgcgacg cgaagaatcc tcccaggccg
      241 tacaagccgc cgacgcggtg cccctcgtgc aggacgccgg tggagcgcga cgaggaggag
      301 gcggccacgt actgccccaa cgtcgcctgc cccgcgcggc agctcgaggc gatcgtgcac
      361 ttcgcgtcgc gcggcgcgat ggacatccgg ggcctctcgt acgcgcgcat cgagcagttc
      421 atcgcggcgt cgctcgtgca cgacgtggcc gacctgtacg acctcaccgt ggcgcagctc
      481 accgccctgg agcgcttcgc cgagaagtcg gcggagaatc tcgtcgaggc gctcgcggcg
      541 tccaagcagc agccgctgtc gcggctgctc ttcgggctcg ggatccggca cgtcggtcag
      601 acggcggcgc agctgctcgc ccgccacttc gggacgatgg acgcgctcgc cgcggcgacg
      661 gcggacgaca tcctcgccat ccgcggcatc ggcgagggga tcgcgctggc ggtggtggcg
      721 ttcttccacg acgcatcggc ccgtggtctc gtgcggaagc tcgcggcgcg cggcctcacg
      781 atgtcggagc cgaaatcggt gtcggcggga ggcgcgttca aggggatgac cttcgtcgtc
      841 accggcaccc tgcccacgct gtcgcgtacg gaggccacgg agctgatcga gtcgaacgga
      901 gggcgggtga cgagcggcgt gtccaaggcc accaccgtgg tggtggtcgg cgaggacgcc
      961 ggcagcaagc tggacaaggc gcggacgctg ggcgtggaga cgatcgacga gaccgagctg
     1021 ctccggcggg cggcgtcggc ggccgcgtcg tgacgagcat cacgctcgag ccgtccactg
     1081 gagatcggac taccttcacg gaactcatga ccatcgacct cagaggcacc ggcatgctcg
     1141 cgatcacgcg cgacgcgctc atcgcgctgc gcgcggcgct catgcgcgac accggtcctg
     1201 ccggcgccgg ctatctccag gaggccggct acgcgggggg cggcgcactg ttcgaggcgt
     1261 tccggcactg gctcgccacg cggggctccg gcgccccgga ggccctgtcg gtggacgact
     1321 tccagcgcga ggccaccgag ttcttccgcc acgccggctg gggctcgctg cacgtcggcg
     1381 cgctccacga caccgtcgcc acgctcgaca ccgacgactg ggtggaagcc acccccgaga
     1441 gccccctgga tcaggtcggc tgctcgttct ccgcgggaat gttcgccgac ttcttcggcc
     1501 gggtggccga cgcgccgctc gccgtgatgg aagtggagtg ccgctccacc ggcgccgcgc
     1561 ggtgccgctt cctgctcggc agcgcggacg tcatgcaggc ggtgtacgac ggcatgagcc
     1621 aggggctggg atacgaggac gcggtgagcg cctcggcctg accgctagcc gccgatcgtc
     1681 tcccgataga gcgggttcgg caccagctct ccctggaaga gcacctcgcg gtcccagggg
     1741 agcacgatcg tgctttcggt ggccagcgcg tggtagtccg gctcgtacgg gcccgtcttg
     1801 aacgccacgg ccgtgcgcac ctccgccgcg ccggcattca cgatggcgct cacggcgagc
     1861 cgcatcgtct cgccggagtc gcaggtctcg tccacgagga gcacccgctt cccgcgcacg
     1921 cccgacggca ccgccccgaa gatcgccggg gtctcgcgca ccgcatccgt ctggtagcgt
     1981 cggctcacga cgatcgagtg gaactcgcga tcgaggatgg cggcgatcac ggccccgggg
     2041 acgaccccgg ccgtggcgat ccccacgatc atctcggggt cgtacgagcg cacgaccttg
     2101 agggccagcg cgcgcgacag ctccccgaag aggggccatt cgacctcgaa gacccccttg
     2161 ctaggttcgg cggtggtgcg gcgtggggac atggggactc cgggaggggg ggaccccggg
     2221 caaggtagcc cgggggcaat ccctctggaa gcacgatacg tgcgcggtca cgcattgtcg
     2281 ccgttgccgc tcgccgcgcc gtggaattaa ctttgccccc gtcggtcccg tcccctgcgc
     2341 gacctgccgt ccacgtcgcc tcctcccgcc gcgcatcgca tgtcctggtt gagccgcctc
     2401 cttggcggca agtcggacgg tcgcatgaag ccgcagcgcc tcgattacct gaacgaggcg
     2461 ctcgccctgg agcgtcaggg cgacttcgac gcggcactca cgtcgtaccg gctggcgttg
     2521 cgcgaccatc cgcaggatcc gcgcatcctc cagaacatgg cgatcgcctt ctcgcgcacc
     2581 gggcggctga acgaggcggt gagcgcatac cgtcgcgcgc tcgagctcga tccggagctg
     2641 tccggcgcgc actacgggct ggcgttcctg cacctcaagc gcggcgacca tgcggaagcg
     2701 gccgcgc
//
LOCUS       DASSYW010001002         2061 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1465651, whole genome shotgun sequence.
ACCESSION   DASSYW010001002 DASSYW010000000
VERSION     DASSYW010001002.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2061)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2061)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2061
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1465651"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1659
                     /locus_tag="VFN38_15830"
     CDS             <1..1659
                     /locus_tag="VFN38_15830"
                     /EC_number="4.2.1.82"
                     /inference="COORDINATES: protein motif:HMM:TIGR03432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjhG/YagF family D-xylonate dehydratase"
                     /protein_id="HET9013294.1"
                     /translation="AVSDPCDGRTQGTDGMMDSLAYRNDAATVLRRLIRSLPTGRGVI
                     AVGTCDKGLPATMLALAGTKQLPGVIVPGGVTLPARGAEDAGQVQSLGARFSHDLISL
                     DYAASMGCRACGSQGGGCQFLGTAATSQVVAEALGLAVPHSALAPSGEPVWLELASRS
                     AAALQRLDALGLTVGHILTDAAVENAMLVHAAFGGSTYLLLHIPAIASAAGLKLPSVD
                     DWNRVNRATPRLVDALPNGPRGFATAQVFMAGGVPEVMLHLRRMGLLDGRVLTATGTT
                     LDATLDWWESSERRQAARARLASAAAIDPDHVVMAPDAARRAGLTRTVVFALGNLAPE
                     GSVIKATAIDPSVIDDDGVYRRRGPARVFTDEHDAIQAVKGVSSPPVRAGDVIVLIGM
                     GPSGTGMQETAQITTALRYLPWGKHVALVTDGRFSGFSSGACIGHVGPEALDDGPIGR
                     VRDGDLIEIEIDRNTLSGRVNLVGAEGVPLDADACQALLRSRPRHPGLAPHERLPDDT
                     RLWAALQRASGGTWAGCVYDVDRIVDALDAAAALRRAGEQSKTS"
     gene            1656..>2061
                     /locus_tag="VFN38_15835"
     CDS             1656..>2061
                     /locus_tag="VFN38_15835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013295.1"
                     /translation="MRHRVSRREFIELGAVGAAAAPWFIHPAAIGAATVTAQEMVDRV
                     RKAVGGEWKADTVDTFKAGDPTTPVTGVVTTSLATIDVMRRAMKAGANVIVTAGPTFY
                     SRADSPTPPAGRGRGTSAPPPPDPVFTAKNDFI"
BASE COUNT          281 a          735 c          762 g          283 t
ORIGIN      
        1 gcggtctccg atccgtgcga cggccgcacg cagggcaccg acgggatgat ggacagcctc
       61 gcctaccgca acgacgcggc gacggtgctg cggcggctga tccgctccct gcccacgggc
      121 cggggcgtga tcgccgtcgg cacgtgcgac aaggggctcc ccgccacgat gctggcgctc
      181 gccggcacga agcagctgcc gggcgtgatc gtgccgggcg gcgtgaccct tccggcgcgc
      241 ggcgccgaag acgcggggca ggtgcagagc ctcggggctc ggttctccca cgatctgatc
      301 agcctcgatt acgcggcgtc gatgggctgc cgcgcgtgcg gatcgcaggg cggcggctgc
      361 cagttcctcg gcaccgccgc cacgtcgcag gtggtggcgg aagcgctggg gctcgccgtg
      421 ccgcacagcg cgctggcgcc gtcgggcgag cccgtgtggc tggagctcgc gagccgatcc
      481 gccgcggcgt tgcagcgtct cgacgcactc gggttgaccg tcggccacat cctgaccgac
      541 gccgccgtcg agaacgccat gctcgtgcac gcggccttcg gcggctcgac gtacctgctg
      601 ctgcacattc cggcgattgc gtcggccgct gggttgaagc tgccctcggt cgacgactgg
      661 aaccgggtca accgtgccac gccgcggctg gtggacgccc tgccgaacgg tcctcgcggt
      721 tttgccaccg cgcaggtctt catggcgggc ggcgtgcccg aggtcatgct gcacctgcgc
      781 cgcatggggc tcctcgacgg gcgggtactc accgcgaccg gcaccacgct cgacgccact
      841 ctcgactggt gggagtcgag cgagcgccgg caggcggcac gcgcacggct cgcgtcggcg
      901 gcggcgatcg acccggatca cgtcgtgatg gcgcccgacg cggcgcggcg cgcggggctc
      961 acccgcacgg tcgtgttcgc gctcggcaac ctggcgccgg aagggtcggt gatcaaagcg
     1021 accgcgatcg atccgtcggt gatcgacgac gacggcgtct accggcgccg cggaccagcc
     1081 cgcgtgttca ccgacgaaca cgacgcgatc caggcggtga aaggcgtctc gtcgccgccc
     1141 gtgcgggccg gcgacgtgat cgtgctcatc ggcatggggc cgtcgggcac cggcatgcag
     1201 gaaacggcgc agatcaccac cgcgctgcgc tacctgccgt ggggcaagca cgtggcgctc
     1261 gtcaccgacg gacggttctc cgggttctcg agcggggcct gcatcggtca cgtcggtccg
     1321 gaggcgctcg acgacgggcc gatcgggcgc gtgcgcgacg gagatctcat cgagatcgaa
     1381 atcgaccgga acacgctgag cggccgcgtc aacctggtgg gcgccgaggg tgtgccgctg
     1441 gacgccgacg cgtgtcaggc gctgctgcgg agccggccgc ggcatccggg gctggccccc
     1501 cacgagcggc tgccggacga tacccgtctg tgggccgcgc tgcagcgcgc gagcggcggc
     1561 acctgggccg gctgcgtcta cgacgtcgat cgcatcgtcg acgcgctcga cgcggccgcg
     1621 gccttacgcc gtgcgggcga acagtcgaaa acgtcatgag gcatcgcgtc tcgcgccgcg
     1681 agttcatcga gctgggcgcc gtcggtgccg cggcggcacc gtggttcatc catcccgcgg
     1741 cgatcggcgc cgcgacggtc accgcgcagg aaatggtcga tcgcgtgcgg aaggccgtcg
     1801 gcggcgagtg gaaggccgac accgtggaca cgttcaaagc gggcgatccc accacgccgg
     1861 tcaccggagt cgtcacgact tcgctcgcca cgatcgacgt gatgcgccgc gcgatgaagg
     1921 ccggtgcgaa cgtgatcgtc accgcggggc cgacgttcta ctcgcgcgcc gacagcccca
     1981 cgccaccggc ggggcgcggc cgcggcacct cggcgcctcc gccgccagat ccggtgttca
     2041 ccgcgaagaa cgatttcatc c
//
LOCUS       DASSYW010001003         2086 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_555103, whole genome shotgun sequence.
ACCESSION   DASSYW010001003 DASSYW010000000
VERSION     DASSYW010001003.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2086)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2086)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2086
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_555103"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(209..1027)
                     /locus_tag="VFN38_15840"
     CDS             complement(209..1027)
                     /locus_tag="VFN38_15840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016110865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00266 family protein"
                     /protein_id="HET9013296.1"
                     /translation="MSQLSDVLDYELIGDDQQAVIVTLDPGETVIAEAGAMMFMEQGI
                     EMNTTLDPNKQGGGVLGKLFAGAKRVLSGDTFFITTFANGSDARRSVAFSSHFPGKIR
                     PVDLREWGGTIIAQKDAFLCAPRGTNVDVAFTKRIGAGFFGGEGFILQRITGDGVAVL
                     HASGALWEKTLASGETLRVDTGCIVAMEQRVGYDIRMVPGIKTALFGGEGLFFATLTG
                     PGKIMLQTMPFSRLADRIIAASPRAGGRQMQEGSMLGGAVLGSVLGGVLGNDNG"
     gene            1245..1934
                     /locus_tag="VFN38_15845"
     CDS             1245..1934
                     /locus_tag="VFN38_15845"
                     /inference="COORDINATES: protein motif:HMM:NF012698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HET9013297.1"
                     /translation="MQLTHPPVASVAIVATAELAERLGDAVSDAGTSVVLHEPAASGR
                     LDTEQWERPDVLLVERTALRDLARDIWHLRRRWPTISIAVVNARDEADAERMLDAGAD
                     DAIIGGSRLLRARLLALSRRARTVNAGARIAIGDVVFDRESRRVWCNGAEVPMTPREC
                     AVIDCLFWNSPRPVGVSTLADFVWGDTAVAERRNVIDVYIGYVRRKLSASRSVVLRTV
                     RGVGYSLSPRD"
BASE COUNT          292 a          762 c          703 g          329 t
ORIGIN      
        1 gtcgactggc caccgtgtgc gactgctgac tgacgacaga gaacggggtt gcccgaagcg
       61 tattcagcgg tctgtcagtc ctgagttaca gactcgagta ctgtgactcg ggactgaccg
      121 accgccgaat cgtgttcgag caaccccgtt ctcggttcgc agtcggccag ttgtccagaa
      181 gatcagtcaa ccgccgcgag tgggacggct acccattgtc gttccccagc acgccaccga
      241 gcacgctgcc cagcaccgcg ccgcccagca tgctcccctc ctgcatctgc cgcccgcccg
      301 cgcgcgggga tgcggcgatg atgcggtcgg ccagccgcga gaacggcatg gtctgcagca
      361 tgatctttcc cggcccggtg agcgtcgcga agaacagccc ctcgccgccg aagagcgcgg
      421 tcttgatccc cggcaccatc ctgatgtcgt accccacgcg ctgctccatc gccacgatgc
      481 atccggtgtc gacgcgcagc gtctcgccgg acgccagcgt cttctcccag agggcgccgg
      541 acgcgtgcag caccgcgacg ccgtcaccgg tgatgcgctg gaggatgaag ccttcgccgc
      601 cgaagaagcc ggccccgatg cgcttcgtga aggcgacgtc cacgttggtg ccgcgcggcg
      661 cgcacagaaa ggcgtccttc tgcgcgatga tcgtcccacc ccactcacgc aggtccaccg
      721 gacggatctt gccgggaaag tgcgacgaga aggccacgct ccggcgcgcg tcgctgccgt
      781 tggcgaaagt ggtgatgaag aaggtgtcgc ccgagagcac gcgcttcgcg ccggcgaaca
      841 gcttgccgag gacgccgccg ccctgcttgt tggggtcgag cgtggtgttc atctcgatcc
      901 cctgctccat gaacatcatc gcgcccgcct cggcgatcac cgtctcgccc gggtcgaggg
      961 tcacgatcac cgcctgctgg tcgtcgccga tcagctcgta gtcgagcacg tcggaaagct
     1021 gactcatcgc cttcgctcct ggtgtggtga atggttcgcg ccatccctac gtcggggtcg
     1081 agctggcgtt tcgacgcgcc ggcctcgaat ctacgccgag cggccgtgga ccgccggaca
     1141 gggggtccgg cccaccccgc attgcgggtc catcccgggc gcggtaacgt cttccgggcc
     1201 tgcgtcggtg tccttcccac tgcaatgcct ttccccgggc gaccatgcag ctcactcacc
     1261 cacccgtcgc gtcggtggcg atcgtcgcca ccgccgagct cgcggagcgg ctcggcgatg
     1321 ccgtctccga tgcgggcacg tccgtcgtgc tccacgagcc cgccgcctcc ggccggctcg
     1381 acaccgagca gtgggagcgg cccgacgtgc tgctcgtcga gcgcaccgcc ctgcgcgacc
     1441 tcgcgcggga catctggcac ctgcgccgcc ggtggcccac gatcagcatc gccgtcgtga
     1501 acgcgcgcga cgaagccgac gccgagcgca tgctggatgc gggcgcggac gacgcgatca
     1561 tcggcggctc gcggctgctc agggcgcggc tcctcgccct gtcgcgccgc gcgcgcaccg
     1621 tcaacgccgg cgcccgcatc gccatcggcg acgtcgtgtt cgaccgcgag tcgcgccgcg
     1681 tctggtgcaa cggcgccgag gtgccaatga cgccgcgcga atgtgccgtg atcgactgcc
     1741 tcttctggaa ctcgccgcgg ccggtgggcg tgagcacgct cgccgacttc gtgtggggcg
     1801 acaccgccgt cgccgagcgg cggaacgtga tcgacgtgta catcgggtac gtgcggcgca
     1861 agctgagcgc gagccggtcg gtggtgctcc gcaccgtgcg cggcgtgggc tacagcctgt
     1921 cgccgaggga ctgagggccg gcggccgcgt gccgcgccgt tgacggaacc gcgaccggcc
     1981 gcctgatttg cgcgcatgat tccacgtctg gctctcctcg ccgcgggcgt gctcggcgcc
     2041 gcggcggcac atgcgcaggc ccagcgcccc gcggcgcgcc cggatt
//
LOCUS       DASSYW010001004         3356 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_342009, whole genome shotgun sequence.
ACCESSION   DASSYW010001004 DASSYW010000000
VERSION     DASSYW010001004.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3356)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3356)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3356
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_342009"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..969
                     /locus_tag="VFN38_15850"
     CDS             <1..969
                     /locus_tag="VFN38_15850"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HET9013298.1"
                     /translation="RRGDRSSAAAVSTSAAEQTTCSSGGDRDDEGDVRTAALNALLQM
                     DAERAMPIIKQVLARRDACSVPLRRKAVFLLSQKPSPETESLMLDLVRHDPDQGVREQ
                     AVFWMGQLHSDVAAAALEDLALHSPEESLREKAVFALGEQNTARGQALVRRLAEAEDT
                     PTRIREKAIFQLGQRRSAENAQFLRDLFGRVARSDRSDEIRKQILFSLSQMRGVGNDR
                     WLLGVATDPSQSIEVRKHALWTAGEAGVGAAELIPLYDRSSDAQVKEQLIWVLSESRD
                     RAAADKLIDIARNDRDPAMRKKAIFWLGQMNDPRVQQLLLDIISKG"
     gene            974..2239
                     /locus_tag="VFN38_15855"
     CDS             974..2239
                     /locus_tag="VFN38_15855"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HET9013299.1"
                     /translation="MPRRFFVVLVAGGAALATPLAAQAPLAARIAQAPDGEVRLQYDA
                     RPGACGDGRGVVGFRRALFADTFESYGTWSDARCVPGPVRIALTVEGGKPVTVRTQIG
                     GTWREAAGRVTDLGTVSSRDAAAWFLAHVPALEGSGRKGRILLPAVLAADAVVLPELL
                     AIARDSARRTDTRRQALQWMGQLGGASEVAPLTTFARTSPDVAGAALAALAALEGGVG
                     VPMLIELAHSGDENVRHNAVFWLGQTGDARALRALHAVIEDQQETERVRRHAIFALSH
                     GDGVASSEFAYLRRIFSTLQDTRLKEAVLQGIAEDGAAGGSWLLERVRDAREPTAVRR
                     SALFWAGQRDATPTRDLVTAYHDLDEANLREHAIFVLSQRDDDAAVDALMQIARADPD
                     RRMRGKALFWLAQRKDDRVTKLISDLLAK"
     gene            2242..3000
                     /locus_tag="VFN38_15860"
     CDS             2242..3000
                     /locus_tag="VFN38_15860"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HET9013300.1"
                     /translation="MRYSALFLGAWLVAFHSAEAQTLGDRIAAAGDGRVIFSFAARPE
                     VCGDGDQSISIGHSSVRWGGEPHPCVHGPVRVRLTMRGGQPEQLESWVGTTTAPDGRD
                     LGTVPPGDAAQWLLALAARGQGRAAVRAITPAVLADGVVVWPTLLEIARDSSGPPRGA
                     RAEAAFWLSRFAGAAIGGHPTTLGEDDPDDADDVRLQAVFALSQLRNREGIPPLLDVA
                     RSNAHLAVRQRALFWLGQSGDSRALSLFESLLRR"
     gene            complement(3004..3249)
                     /locus_tag="VFN38_15865"
     CDS             complement(3004..3249)
                     /locus_tag="VFN38_15865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013301.1"
                     /translation="MDEHARRRVLVAGVALAGVALLQGCAVVTAPYVAERAPVASHSM
                     VTRFDKRFLRADGSTPTGGSSLYMPRPRERGLFYFRY"
BASE COUNT          477 a         1185 c         1197 g          497 t
ORIGIN      
        1 cggcgcggcg atcgctcgtc ggcagcggcg gtctccacct ccgcggcgga acagacgacc
       61 tgttcctctg gaggcgaccg cgacgacgaa ggcgatgtgc gcacggccgc gctcaacgca
      121 ctcctgcaga tggatgcgga acgggcaatg ccgatcatca agcaggtgct cgcccgccgc
      181 gacgcgtgct cggtgccgct ccgccggaag gccgtgttcc tgctgtccca gaagccctcg
      241 ccggagaccg agtcgctgat gctcgacctc gtgcggcacg accccgatca gggggtgcgc
      301 gagcaggccg tattctggat gggacagctg cacagcgacg tcgccgccgc ggcactcgag
      361 gacctcgcgt tacactcgcc ggaggagtcg ctccgcgaga aggccgtgtt cgcgctcggc
      421 gaacagaaca cggcgcgcgg ccaggcgctg gtgcggcggc tggcggaggc ggaggatacg
      481 ccgacgcgca tccgtgagaa ggcgatcttc cagctggggc agcggcgctc ggcggagaac
      541 gcgcagttcc tgcgcgacct gttcgggcgt gtcgccagat ccgaccgcag cgacgagatc
      601 cgcaagcaga tcctcttctc gctctcacag atgcggggtg tcggcaacga tcggtggctg
      661 ctgggcgtcg cgaccgatcc gtcccagagc atcgaggtgc ggaagcatgc gctgtggacg
      721 gccggcgagg ccggcgtggg tgccgccgag ctgattccgc tctacgaccg cagcagcgac
      781 gcgcaggtca aggagcagct catctgggtg ctgtccgaat cgcgcgaccg tgcggcggcc
      841 gacaagctga tcgacatcgc gcgcaacgac cgtgatcccg cgatgcggaa gaaggcgatc
      901 ttctggctcg gccagatgaa cgatccgcgc gtccagcagt tgctgctcga catcatctcc
      961 aaggggtagt cgcatgccac gtcgattctt cgtcgttctc gtcgccggtg gcgcagccct
     1021 ggccacgccg ctggcagccc aggcgcccct ggcggcgcgc atcgcgcagg cgcccgacgg
     1081 tgaggtacgc ctgcagtacg acgcccgccc gggcgcctgc ggcgacggcc gcggcgtcgt
     1141 gggattcagg cgcgccctgt tcgccgacac gttcgaatcg tacggcacct ggagcgatgc
     1201 tcgctgcgtg ccgggtccgg tgcgcatcgc gctgacggtc gagggcggga agccggtgac
     1261 cgtgcgcacc cagatcggcg gcacgtggcg cgaggcagcg ggacgggtga ccgacctcgg
     1321 caccgtgtcg agccgcgatg cggcggcctg gttccttgcg cacgtgccgg cgctcgaggg
     1381 ctccggtcga aaggggcgca tcctgctgcc ggccgtgctc gccgcggacg ccgtcgtcct
     1441 tcccgagctg ctcgcgatcg cacgcgacag cgcccgtcgg acggacacgc gacgtcaggc
     1501 cctccagtgg atggggcagc tcggcggggc gagcgaggtg gcgccgctca ccaccttcgc
     1561 gcgcacgtcg ccggacgtcg cgggcgccgc acttgccgcc cttgccgcgc tcgagggcgg
     1621 agtcggggtg cccatgctga tcgagctcgc gcactccggc gacgagaacg tccgccacaa
     1681 cgcggtcttc tggctcggcc agaccggcga cgcgcgtgcg cttcgcgcgc tccacgccgt
     1741 gatcgaggat cagcaggaga cggagcgtgt gcgccggcac gccatcttcg ccctgtcgca
     1801 cggcgacggg gtggcgtcgt cggagttcgc gtatctgcgt cgcatcttct caacgctgca
     1861 ggacacgcga ctcaaggagg ccgtcctgca gggaatcgcc gaagacggcg cggccggggg
     1921 cagctggctg ctcgagcggg tgcgcgacgc gcgggagccc accgcggtcc gtcgctccgc
     1981 actgttctgg gcgggacagc gtgacgcgac gccgacccgg gatctcgtca cggcctatca
     2041 cgatctcgac gaggccaatc tccgcgagca tgcgatcttc gtcctgtcgc agcgcgacga
     2101 cgacgccgcc gtggacgcgc tgatgcagat cgcccgggcg gatcccgacc ggcgcatgcg
     2161 cggcaaggcg ctcttctggc tcgcgcaacg aaaggacgat agggtgacga agctcatcag
     2221 cgatctgttg gcaaaatgat catgcgctac tcggcccttt ttctcggcgc ctggctcgtc
     2281 gcgtttcact cggcggaggc gcagacgctt ggagaccgca tcgccgcggc cggcgatggc
     2341 cgcgtgatct tctccttcgc cgcgcggccg gaggtctgcg gcgacggcga tcagtcgatc
     2401 agcatcgggc actcgtccgt ccgttggggc ggcgaaccgc acccctgcgt gcatgggccg
     2461 gttcgcgttc ggctcaccat gcgcggcggg cagccggaac agctcgagag ctgggtcggc
     2521 acgacgaccg ccccggacgg ccgcgatctg ggcaccgtgc cgcccggcga cgcggcacag
     2581 tggcttctcg cgctcgccgc tcgaggacag gggcgcgccg cggtgcgcgc gatcacgccc
     2641 gccgtgctcg ccgacggcgt cgtcgtgtgg ccgacgttgc tcgagatcgc gcgcgactct
     2701 tctggcccgc cacgtggcgc gcgcgcggag gcggcgttct ggttgtcgcg attcgccggt
     2761 gccgccatcg gcggccaccc caccaccctg ggcgaggacg accccgacga tgcggacgac
     2821 gtcaggctcc aggccgtgtt cgcgctgtcc cagctgcgca atcgcgaagg gatcccgccg
     2881 ctgctcgacg tcgcccgttc gaacgcgcac ctcgcggtcc gccagcgcgc gctgttctgg
     2941 ctcggccaga gcggcgactc gcgagccttg tcgctcttcg agtcgctgct ccgtcgctga
     3001 ccgctagtag cggaagtaga acagcccgcg ctcgcgcggg cgcggcatgt acagcgatga
     3061 cccgcccgtg ggggtgctgc cgtccgcgcg caggaagcgc ttgtcgaagc gcgtgaccat
     3121 gctgtgactc gccacgggcg cccgctcggc gacgtacggc gccgtcacga ccgcgcagcc
     3181 ctggagcagc gcgacaccgg ccagtgcgac gccggccacc agcacccgtc tcctcgcatg
     3241 ttcatccatg tccctcacct cgaccgaaaa ggaagcgttc gcccgacgcg tccaatgttg
     3301 ctcgcacgcc gcacttcgca aggtggctgt gacgagccgt gatcctcagg gacgcg
//
LOCUS       DASSYW010001005         2412 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_14586, whole genome shotgun sequence.
ACCESSION   DASSYW010001005 DASSYW010000000
VERSION     DASSYW010001005.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2412)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2412)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2412
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14586"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..509)
                     /locus_tag="VFN38_15870"
     CDS             complement(<1..509)
                     /locus_tag="VFN38_15870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013302.1"
                     /translation="MRRSNLLLVALLVAASAPLAAQAPARRPLRAGDIYQLRVVNDPQ
                     LSPDGAWVAYTVTSADSAKDKSDADLWMTSWDGAQTVRLTSSPEGESAPRWSPDNRYL
                     AFVSGRQEGKGGQVWLLDRRGGEAQRLTMLKGGIEDFAWSPDSKRLVLVLEEDTDSLA
                     RKDTAEKKTP"
     gene            610..1782
                     /locus_tag="VFN38_15875"
     CDS             610..1782
                     /locus_tag="VFN38_15875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HET9013303.1"
                     /translation="MLDFYDIDSVLSEEERAVRDSVRRFVDDRVLPIIGGAYVEGRFP
                     KELIPEMGELGVFGANLPEEYGCAGLNNVQYGLIMQELERGDSGVRSFASVQGALAMY
                     PIYAFGSEEQKKRYLPKMATGEIIGCFGLTEPDYGSNPSGMITMAKEQQDGSWILNGA
                     KMWITNGSTAQIAVVWAKTNGDPADKSIRGFIVPTDAKGFKAKDQKGKLSLRASDTSE
                     LVFQDVHLPKDALLPKSGGLKSPLMCLTQARYGISWGAMGAAMACFEEASSYAQQRVM
                     FDKPIGGFQIQQVRLADMLTEIVKAQLVCLHLGRLKDAGTMTPQQVSLAKRNNVSMAT
                     DIAREARRLLGANGILAEYSAMRHMANLESVYTYEGTHDVHSLILGQAVTGLNAFK"
     gene            1914..>2412
                     /locus_tag="VFN38_15880"
     CDS             1914..>2412
                     /locus_tag="VFN38_15880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013304.1"
                     /translation="MPTNSTTQSSGTKQSSTSRTSRASGGASAGERPDTATKTGRSAN
                     AASAGSATGAAGNRAAIPDQQRARQAGSAQAGSQMGSQQAGSRQGTAAAAPAESPRAD
                     RERDLGVSREREVRAAPPRTSAPFTSAQSSSTYASPFAFMRRFGEDMDRLFEEFGFAP
                     LGLDPF"
BASE COUNT          391 a          832 c          879 g          310 t
ORIGIN      
        1 ggcgtcttct tctccgccgt gtccttccgc gccagcgagt cggtgtcctc ctcgagcacg
       61 aggacgaggc gcttcgagtc gggcgaccag gcgaagtcct cgattccccc cttgagcatc
      121 gtgagccgct gcgcctcgcc cccgcggcgg tcgagcagcc acacctggcc ccccttcccc
      181 tcctgccgcc ccgagacgaa ggcgaggtac cggttgtcgg ggctccagcg gggcgcactc
      241 tccccctcgg gcgacgaggt gaggcggacc gtctgcgcgc cgtcccagct cgtcatccag
      301 agatcggcgt cggacttgtc cttcgccgag tcggccgagg tgacggtgta cgccacccat
      361 gcgccgtcgg gggagagctg cgggtcgttc accacgcgca gctggtagat gtcgccggcg
      421 cggagcgggc gtcgggccgg cgcctgcgcc gcgaggggcg cggacgcggc gacgaggagc
      481 gcgacgagga ggaggtttga acgccgcatg gagggggctc ggagtggtag gaggcgacgg
      541 ccgggcggtg cgccggccaa tatacggtga ttacctttcg ccggctggcc tcccctcaac
      601 gacccgcgaa tgctcgactt ctacgacatc gacagcgtcc tatccgagga agagcgcgcc
      661 gtgcgcgaca gcgtgcgccg cttcgtggac gatcgcgtcc tgcccatcat cggcggcgcc
      721 tacgtggagg ggcgcttccc caaggagctc atccccgaga tgggggagct gggggtgttc
      781 ggcgccaacc tgcccgagga gtacggctgc gcggggctga acaacgtgca gtacgggctc
      841 atcatgcagg agctcgagcg cggcgactcc ggcgtgcgct cgttcgccag cgtgcagggg
      901 gcgctggcca tgtaccccat ctacgccttc ggctccgagg agcagaagaa gcggtacctg
      961 ccgaagatgg cgacggggga gatcatcggc tgcttcgggc tcacggagcc ggactacggg
     1021 tccaacccga gcggcatgat caccatggcc aaggagcagc aggacgggag ctggatcctg
     1081 aacggcgcga agatgtggat caccaacggc tccaccgcgc agatcgccgt cgtgtgggcg
     1141 aagaccaacg gcgatccggc cgacaagtcc atccgcggct tcatcgtccc caccgacgcc
     1201 aaggggttca aggcgaagga ccagaagggg aagctgtcgc tgcgcgcgag cgacacgagc
     1261 gagctggtgt tccaggacgt gcacctgccg aaggacgcgc tcctcccgaa gtcgggcggc
     1321 ctcaagagcc cgttgatgtg cctcacccag gcgcgctacg gcatctcgtg gggggcgatg
     1381 ggggcggcga tggcgtgctt cgaggaggcg tcgagctacg cccagcagcg cgtgatgttc
     1441 gacaagccga tcggcggctt ccagatccag caggtgcggc tggcggacat gctcaccgag
     1501 atcgtgaagg cgcagctggt gtgcctgcac ctgggccgcc tgaaggacgc ggggacgatg
     1561 acgccgcagc aggtgtcgct ggcgaagcgg aacaacgtga gcatggccac cgacatcgcg
     1621 cgcgaggcgc ggcggctgct cggcgccaac ggcatcctcg ccgagtactc ggcgatgcgg
     1681 cacatggcga acctcgagag cgtgtacacg tacgagggga cgcacgacgt ccactcgctg
     1741 atcctcgggc aggcggtcac ggggctgaac gccttcaagt agcggggcgg cgcgccgccc
     1801 cggcaccgcc ccgcgccggc cgacgccggc gcgcggaagc ctgcacgccg cgcctccatg
     1861 gcacttcgct tgccgcattt cgcgatgctg cgagcgacac caaggaggat cgcatgccga
     1921 cgaacagcac cacccagagc agcggtacga agcagagctc caccagcagg acgtcgcggg
     1981 cgagcggcgg ggcgagcgcg ggcgagcggc ccgacaccgc cacgaagacc ggacgcagcg
     2041 cgaacgccgc gagcgcgggg agcgccaccg gcgccgcggg caatcgcgcg gcgatcccgg
     2101 atcagcagcg cgcgcggcag gccgggagcg cgcaggccgg aagccagatg ggaagccagc
     2161 aggccgggag ccggcagggc accgccgccg ccgctcccgc cgagtcgccg cgcgccgatc
     2221 gcgagcgcga cctgggcgtc tcccgcgagc gcgaggtgcg cgccgcaccg ccgcgcacca
     2281 gcgcgccctt cacctcggcg cagagctcca gcacctacgc cagccccttc gccttcatgc
     2341 ggcgattcgg cgaggacatg gaccggctgt tcgaggagtt cggcttcgcg ccgctcggcc
     2401 tcgatccctt cg
//
LOCUS       DASSYW010001006         4308 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_286797, whole genome shotgun sequence.
ACCESSION   DASSYW010001006 DASSYW010000000
VERSION     DASSYW010001006.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4308)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4308)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4308
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_286797"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..223
                     /locus_tag="VFN38_15885"
     CDS             <1..223
                     /locus_tag="VFN38_15885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="peptidase M28"
                     /protein_id="HET9013305.1"
                     /translation="TNTDSTPFMDLVPSITLRENERGAQIGGGWDPHWHQPTDLFATF
                     SDADFRLALNAAQTTLGAVALLTGARLAR"
     gene            369..1025
                     /locus_tag="VFN38_15890"
     CDS             369..1025
                     /locus_tag="VFN38_15890"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HET9013306.1"
                     /translation="MAASLRTLPPVLRPDELASLLETSPDVRLLDVRTPAEYESVHIR
                     GAYNVPLDLLAEHGPEIRATVLEPVVLICQSGQRAQKAEAALRAAGMPSLHVLDGGVN
                     GWTAAGQPVVRGTQRLSLERQVRIAAGTLAALGGVLALAVNPLFGLVAAFVGSGLVFA
                     GVTNSCGMAMVLSRMPYNRAVSCDVDAMVRALVDGTAPVGVGRRPDRSAVAPRSCAAC
                     "
     gene            1033..1854
                     /locus_tag="VFN38_15895"
     CDS             1033..1854
                     /locus_tag="VFN38_15895"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HET9013307.1"
                     /translation="MQLLGFALAALIGLSLGLLGGGGSILTVPIFVYVLGFAAKPAIA
                     MSLPVVGATSLVGALGHWRAGNVNMRMALLFGGVAMVGAYAGARLAILVSGTVQLTVL
                     AVVMLAAAASMFRSGRRRAAPAEAGESSVDGGAMSLWLVLVVGVGVGLLTGLVGIGGG
                     FLVVPALVVLGKVPMKQAIGTSLVVIAMNSLSGFLGYLGQVTMPWGFLALFTAVAIAG
                     ILVGTYLVRFVSQAALKQAFAVFLVLMGGLMLYKNTVSAGARGADAVPVAPAASR"
     gene            1979..3430
                     /locus_tag="VFN38_15900"
     CDS             1979..3430
                     /locus_tag="VFN38_15900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HET9013308.1"
                     /translation="MLLKRFYDDKLAQASYLVGCQATGEALVIDPHRDVAQYLRAAEQ
                     EGLRITHVTETHIHADFVSGSRELAERAAAKLFLSDEGDASWKYAFARDAGAVLLKDG
                     DSFMVGNLRVQALHTPGHTPEHLSFMITDTPATDRPMGVFTGDFIFAGDVGRPDLLEK
                     AAKVMGTMEAGARTLHRSIAKFKRLPDYLQLWPGHGAGSACGKALGAIPSTTLGYEKI
                     ANWGLADVTEDEFVEQVLAGQPEPPKYFAEMKRINKAGPRSLHGFRRPERLPESRIAA
                     LLDAGATVVDTRPWSEFAVGHIPRTINIPLNKSFTTWAGWLLSFDRPFYLIVDDASSH
                     DIDEAVRDLAMIGLDQVAGFFGATVMDAWVGEHRELGTLPQTTSRDLATALLTGSVAV
                     VDVRGAAEWEAGHLPGVPNIPLGYLADRVAELPTDKPIVVHCQGGTRSAIAASLLRAR
                     GMDNVVNLVGGFADWAAGGHPVERGAAAAARVG"
     gene            complement(3467..3880)
                     /locus_tag="VFN38_15905"
     CDS             complement(3467..3880)
                     /locus_tag="VFN38_15905"
                     /inference="COORDINATES: protein motif:HMM:NF015581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF302 domain-containing protein"
                     /protein_id="HET9013309.1"
                     /translation="MPEQTTRYGISTPVNLPYDAAVERTREALRAEGFGVLTEIDVRA
                     TLKQKLDVAFRPYIILGACNPPLAHQALTAERDIGLLLPCNVIVYAADEPGRSVVAAM
                     DPVEALALSGNDGIRPLALEVRSRLERALTAIEQG"
     gene            3964..4293
                     /locus_tag="VFN38_15910"
     CDS             3964..4293
                     /locus_tag="VFN38_15910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HET9013310.1"
                     /translation="MGKLTLTPEVLALIAERFKVLAEPARLQILSCLRRGEMTVGEVV
                     EESELGQANVSKHLQLLYGLGFVTRRKEGLYVYYSLSDDRVFELCDIMCGRLEADLKT
                     RRKLLAS"
BASE COUNT          611 a         1445 c         1566 g          686 t
ORIGIN      
        1 gaccaacacc gattccacgc ccttcatgga tctcgtgccg tcgatcaccc tgcgcgagaa
       61 cgagcgcggg gcccagatcg gcggcggctg ggatccgcac tggcaccagc ccaccgacct
      121 gttcgccacc ttcagcgacg cggacttccg gctcgccctc aacgcggccc agaccacgct
      181 gggcgccgtg gcgctgctga ccggggctcg gctggctcgc tgacggccgc gcaaaatggc
      241 gggcgccggg gacgcccgtg gaaaggggga tgggagttgc atcgaatcat atatcaacta
      301 tattaccatc cagttgataa gcgcaccgga ctggctggtg cctcaccgat tcgatagggt
      361 attgccacat ggctgcttcg ctccgcacgc ttccccccgt tctccgcccc gacgagctcg
      421 cgtctctcct cgagacgagc cccgacgtgc gtctcctcga cgtacgcacc ccggccgagt
      481 acgagtcggt ccacatccgc ggtgcgtaca acgttcccct cgacctgctg gccgagcatg
      541 gtcccgagat ccgggcgacc gtgctggagc ccgtcgtcct catctgccag tccggccagc
      601 gtgcccagaa ggcggaagcc gccctccgtg ccgcagggat gccgagcctg cacgtgctcg
      661 acggcggggt gaatgggtgg accgcggcag gacagccggt ggtgcgcggt acgcagcgcc
      721 tctcgctcga gcgccaggtg cgcatcgcgg cggggactct cgcggcgctg ggcggagtgc
      781 tggcgctcgc ggtgaacccg ctcttcgggc tggtggcggc gttcgtcggc agcggcctgg
      841 tgttcgccgg tgtcaccaac agctgcggca tggcgatggt gctttccagg atgccgtaca
      901 atcgcgccgt ctcctgcgac gtggacgcca tggtgcgcgc gctggtggac gggacggcgc
      961 ccgtgggcgt cgggcgcagg ccggaccgct cggcggtggc gccgcgcagc tgcgccgcgt
     1021 gctgaggcgc tgatgcagct tctcggattc gcgctcgccg ccctgatcgg gctctcgctc
     1081 ggcctgctcg gcggcggtgg gtcgatcctg accgtgccga tcttcgtgta cgtgctcggt
     1141 ttcgccgcga agcccgcgat cgcgatgagc ctgccggtgg tcggcgccac gagcctcgtc
     1201 ggcgcgctcg ggcactggcg tgcgggcaac gtgaacatgc gcatggctct cctcttcggt
     1261 ggcgtggcca tggtgggcgc gtatgccggt gcgaggcttg ccatcctcgt gagcggtacg
     1321 gtgcagctca cggtgctcgc cgtcgtgatg ctcgccgcgg ccgcctcgat gttccgcagc
     1381 ggccggcgcc gcgcggcccc ggcggaggcg ggcgagtcga gcgtcgatgg gggcgcgatg
     1441 tcgctctggc tggtgctggt cgtgggggtg ggggtcggcc tgctcaccgg cctcgtcgga
     1501 atcggaggtg ggttcctcgt cgtgccggcg ctcgtcgtgc tgggcaaggt cccgatgaag
     1561 caggcgatcg gcacctcgct ggtggtgatc gcgatgaact cgctctcggg attcctgggc
     1621 tacctcggcc aggtgaccat gccgtggggc ttccttgccc tgttcaccgc ggtcgcgatc
     1681 gccgggatcc tggtgggcac ctacctcgtg cgcttcgtgt cccaggcggc gctcaagcag
     1741 gcgttcgccg tgttcctcgt gctcatgggg ggcctgatgc tgtacaagaa caccgtgtcc
     1801 gcgggcgcac gaggcgccga tgcggtcccg gtcgccccgg ccgcatcacg ctgaccggac
     1861 gggcgccgat gtcgatccac gcgcgatcgc ggactgctgg cgatcccgct cgttccgcaa
     1921 ccgattcccg acgttcgacg ccgccccgca accgggacgg catcgaaagg agatttccat
     1981 gctgctgaag cgattctacg acgacaagct cgcccaggcg agctacctgg tgggatgcca
     2041 ggccacgggt gaagcgctcg tgatcgaccc gcatcgcgat gtcgcgcagt acctgcgcgc
     2101 cgcggagcag gaaggcctgc gcatcacgca cgtgaccgag acccacatcc atgccgactt
     2161 cgtgagcggc agtcgcgagc tggcggagcg cgcggccgcg aagctcttcc tgtccgacga
     2221 gggggacgcg agctggaagt acgcgttcgc ccgcgacgcc ggcgccgtgc tgctcaagga
     2281 cggcgactcg ttcatggtgg gcaacctcag ggtgcaggcg ctgcacacgc cggggcacac
     2341 cccggagcac ctgtccttca tgatcaccga tacgccggcc accgaccggc cgatgggcgt
     2401 gttcaccggc gacttcatct tcgcgggcga cgtgggacgg cccgacctgc tggagaaggc
     2461 ggcgaaggtg atggggacca tggaggcggg cgcacgcacc ctccatcgca gcatcgcgaa
     2521 gttcaagcgc ctgcccgact acctgcagct gtggccggga cacggcgccg gctcggcctg
     2581 cggcaaggcg ctgggcgcga tcccgagcac gacgctgggc tacgagaaga tcgcgaactg
     2641 gggcctggcc gacgtcaccg aggacgagtt cgtggagcag gtgctggccg gccagcccga
     2701 gccgccgaag tacttcgcgg agatgaagcg catcaacaag gcgggaccgc gcagcctgca
     2761 cggcttccgc cgccccgaac ggctgccgga gtcccggatc gcggcgctgc tcgatgccgg
     2821 cgcgaccgtg gtggacacgc gtccatggtc cgagttcgcc gtgggacaca tcccgcgcac
     2881 catcaacatc ccgctgaaca agagcttcac gacgtgggcg ggctggctgt tgtccttcga
     2941 ccgcccgttc tacctcatcg tcgacgacgc gtccagccac gacatcgacg aggcggtacg
     3001 cgatctcgcg atgatcggcc tcgatcaggt ggcgggcttc ttcggggcaa cggtgatgga
     3061 cgcatgggtc ggggagcatc gcgagctggg gaccctgccg cagacgacgt cgcgcgacct
     3121 cgccaccgcg ctgctcacgg gcagcgtggc ggtggtggac gtgcgaggag cggccgagtg
     3181 ggaggcgggc cacctgccgg gcgtgccgaa catcccgctc gggtacctgg ccgaccgcgt
     3241 cgcggagctg ccgacggaca agccgatcgt ggtgcactgc caggggggaa cgcgctccgc
     3301 gatcgcggcg agccttctgc gtgcgcgcgg catggacaac gtggtcaacc tggtcggcgg
     3361 cttcgccgac tgggcggcgg ggggccatcc ggtggagcgt ggcgcggcgg cggcggcgcg
     3421 cgtcggctga ccgccgcgcc ctccctcgcc gtttcgtccc gcgcgctcag ccctgctcga
     3481 tggcggtgag cgcgcgctcg agacgcgagc ggacctcgag cgcgaggggg cggatgccgt
     3541 cgttgccgga gagggcgagc gcctccacgg gatccatcgc cgccaccacg ctcctgcccg
     3601 gctcgtcggc cgcgtagacg atcacgttgc acgggagcag gaggccgatg tcccgctcgg
     3661 ccgtcagggc ctggtgggcg agcggggggt tgcaggcgcc gaggatgatg tacggccgga
     3721 aggccacgtc gagcttctgc ttcagcgtgg cgcggacgtc gatctcggtg agcacgccaa
     3781 agccttcggc gcggagggct tcccgcgtcc gctcgaccgc ggcgtcgtac ggcaggttca
     3841 ccggggtgct gataccgtaa cgcgtggtct gctctggcat ggccgcctcc acgggcgagg
     3901 gtggttgatg actcgatgga agtctactat attaccagac ggacatacaa ggacggagga
     3961 gccgtgggaa agctgaccct gacgccggaa gtgctggcgc tgatcgccga acgcttcaag
     4021 gtgctcgccg agcccgcgcg gctccagatc ctgagctgcc tgcgccgggg cgagatgacg
     4081 gtgggcgagg tcgtggagga gagcgagctc ggccaggcca acgtctccaa gcatctccag
     4141 ctcctctacg gcctgggttt cgtgacgcgc cggaaggagg ggctgtacgt gtactacagc
     4201 ctgtccgacg acagggtgtt cgagctgtgc gacatcatgt gcggacggct ggaggccgat
     4261 ctgaagacgc ggcgcaagct actcgcgtcg tgatccgccg cgccgacg
//
LOCUS       DASSYW010001007         2004 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_802592, whole genome shotgun sequence.
ACCESSION   DASSYW010001007 DASSYW010000000
VERSION     DASSYW010001007.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2004)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2004)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2004
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_802592"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..759
                     /locus_tag="VFN38_15915"
     CDS             <1..759
                     /locus_tag="VFN38_15915"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HET9013311.1"
                     /translation="GAAVLDHCDRSLIFGGQATVERYRGNPKVQAHGPGFSKILLGDD
                     EVDNWERYLDVMVDSVFANSGRGCINCSGIWASRHTRAIADAIAKRLAAIQPLPPDDA
                     EASLAAFTVPGVADAISGAIDASLQAPGVTDVTATFRQGPRVVKHGLADYLLPTVVHS
                     SSPDAAIAKQEYMFPFVTVVECPEEKMIEAIGPTLVCTAITAKPELRRRLLDAVNIDR
                     LNFGPVPTIQLNWLQPHEGNIVEFLFRARAFQTA"
     gene            766..>2004
                     /locus_tag="VFN38_15920"
     CDS             766..>2004
                     /locus_tag="VFN38_15920"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024968.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HET9013312.1"
                     /translation="MRILSFTGGAGNMYCGSCLRDNALAAALLARGHDVVLTPVYTPT
                     RTDERNVSQHHVAFGGISVFLEQHSSIFRHTPKLLDRLWDAEWVIKMASKRQIKVDPK
                     SLGEMTVSMLKGTDGFQRKEIDKLLDWLRREPRFDVVNLPYTLLVGLAEPLRSALRAP
                     VCCTLQGEDLFLDGLGEPWRQQSLDLIRAASVHVDAFLPVSRYYFDFMPGYLGIPQSK
                     MRLVPLGINTDGYSPKPPRRHSPFTIGYFARIAPEKGLHALADAYRRLRARPGIGESR
                     LVAAGYLAPEHRGYLDGIVSDLRSWGLGGEFEYRGEVDRAQKVEFLHGLDVLSVPATY
                     EEPKGIFLLEAMANGVPVVQPRRGAFPEVIAATGGGIIVDADNPEALADGWLALWRDP
                     ARAAALGAAGAAGVRAHYSVD"
BASE COUNT          302 a          705 c          682 g          315 t
ORIGIN      
        1 ggcgccgccg tgctcgatca ctgcgatcgg agcctgatct tcggtggtca ggcgaccgtc
       61 gagcgctacc gcggcaaccc caaggtgcag gcgcacgggc cgggcttctc caagatcctg
      121 ctcggcgacg acgaggtcga caactgggag cgctacctcg acgtgatggt cgatagcgtg
      181 ttcgccaaca gcggccgcgg ctgcatcaac tgctccggga tctgggcgag ccgccacacg
      241 cgcgcgatcg ccgatgccat cgccaaacgc ctcgcagcga ttcagccgct gccgcccgac
      301 gacgcggagg cgagcctcgc ggcgttcacc gtgcccggcg tcgccgacgc gatctccggc
      361 gcgatcgacg cgtcgctgca ggcgcccggc gtcaccgacg tcacggcgac gttccgccag
      421 ggcccgcgcg tcgtcaagca cggcctcgcg gattacctgc tgccgacggt cgtccacagt
      481 tcgtcgcccg acgccgcgat cgcgaagcag gaatacatgt ttccgttcgt gaccgttgtc
      541 gagtgccccg aggagaagat gatcgaggcg atcgggccga cgctcgtgtg cacggccatc
      601 accgccaagc cggagctgcg ccgccgcctg ctcgacgcgg tcaacatcga tcgtctgaac
      661 tttggccccg tgccgacgat tcagctcaac tggctgcagc cgcacgaggg caacatcgtc
      721 gagttcctgt tccgcgcgag ggcgttccag accgcctaga cggccgtgcg aatcctgtct
      781 ttcacgggcg gcgccggcaa catgtactgc ggcagctgcc tgcgggataa cgccctcgcc
      841 gccgcgctcc tcgcgcgcgg ccacgacgtc gtcctgacgc ccgtgtacac gccgacgcgg
      901 accgacgagc gcaacgtcag ccagcatcac gtcgcgttcg gcggcatcag cgtctttctc
      961 gagcagcact cgtcgatctt ccgccacacg ccgaagctcc tcgatcgtct gtgggacgcg
     1021 gagtgggtca tcaagatggc gtcgaagcgc cagatcaaag tcgacccgaa gagcctgggc
     1081 gagatgaccg tgtcgatgtt gaaggggacc gacggcttcc agcggaagga gatcgacaag
     1141 cttctcgact ggctgcggcg cgagccgcgc ttcgacgtcg tcaacctgcc gtacacgctg
     1201 ctcgtcggcc tggcggaacc gctgcggtcg gcgctgcgcg cgccggtgtg ctgcacgctc
     1261 cagggtgagg atttgttcct cgacgggctc ggggagccgt ggcggcagca gtcgctggat
     1321 ctcattcgcg ccgcgagcgt gcacgtggac gcgttcctgc cggtgagccg ctactatttc
     1381 gacttcatgc ccgggtacct cggcatcccg cagtcgaaga tgcggctcgt gccgctcggg
     1441 atcaacaccg acggctactc gccgaagccg ccgcggcgac acagcccgtt cacgatcggc
     1501 tatttcgcgc ggatcgcgcc ggagaaaggg ctgcacgccc tcgccgacgc ctatcgccgg
     1561 ctgcgcgcgc gtcccgggat cggcgagtcg cgcctcgtgg cggccggata tctcgcgccc
     1621 gagcatcgcg gctatctcga cggcatcgtc tcggacctgc gctcgtgggg cctcggcggc
     1681 gagttcgagt atcgcggcga agtcgaccgc gcgcagaagg tcgagttcct gcacggcctc
     1741 gacgtgctgt cggtgccggc gacatacgag gagccgaagg gcatcttcct gctcgaagcg
     1801 atggcgaacg gcgtgccggt cgtccagccg cgacgcggcg cgtttcccga ggtgatcgcc
     1861 gccaccggcg gcgggatcat tgtcgacgcc gacaacccgg aagcgctggc ggacggctgg
     1921 ctcgcgctgt ggcgcgatcc ggcgcgcgcc gccgcgctcg gcgccgccgg agccgcgggc
     1981 gtgcgcgcgc actacagcgt cgat
//
LOCUS       DASSYW010001008         2883 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_769691, whole genome shotgun sequence.
ACCESSION   DASSYW010001008 DASSYW010000000
VERSION     DASSYW010001008.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2883)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2883)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2883
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_769691"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..450)
                     /locus_tag="VFN38_15925"
     CDS             complement(<1..450)
                     /locus_tag="VFN38_15925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013313.1"
                     /translation="MSIFVAMSSRMRTALLVAATAGVPALALAQGTSASRARPQSIVV
                     TAPSIRVRTAPSMLSISIEEVSRGQVFALASDENHSKDWVGIVLDGRIAFLPRYSIGL
                     RSQPVQSAAATSSASFVQAGMPAPVTPAPARYAAPAPAASATVAALPP"
     gene            complement(600..1112)
                     /locus_tag="VFN38_15930"
     CDS             complement(600..1112)
                     /locus_tag="VFN38_15930"
                     /inference="COORDINATES: protein motif:HMM:NF023367.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3459 domain-containing protein"
                     /protein_id="HET9013314.1"
                     /translation="MTFTSNHDENSWNGTELERMGANHLPAFVLSATSRRAMPLLYTG
                     QEASLRKRLRFFEKDTVDWTGPSLAGFYRAVFDLKHRQPALANGAWGGAQAALATDGG
                     DRVYAFTRTRGPNTVVVAVNFGEAPVTVAYRGLARAGRYTDWFTKRPLVLAPAGRVEI
                     PAHGYRVLVR"
     gene            complement(1116..2003)
                     /locus_tag="VFN38_15935"
     CDS             complement(1116..2003)
                     /locus_tag="VFN38_15935"
                     /inference="COORDINATES: protein motif:HMM:NF012356.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HET9013315.1"
                     /translation="MRPALLPLLAVAGLSLRPAPSPAQQPARIEPPARAAAGALRHPA
                     WSRHAVIYEVNVRQYTPEGTLVALQRHLPRLRRLGVDILWLMPVQPIGKKNRKGTLGS
                     YYAIADYTAINPEFGSEADFRAFVRAAHRQGMKVILDWVANHTAFDHPWIEQHPEYYV
                     RRADGTIVNARDNEGRDTDWTDVAELNFDDARMRRAMIGDMRWWVDRMGSDGFRCDVA
                     GGVPTGFWVEARRELTRSRPDLFMLAEAEDPGIHAAFDMTYAWRLHHLLNDIARGKAS
                     TGALDGYFARDDSLFGGDT"
     gene            2168..>2883
                     /locus_tag="VFN38_15940"
     CDS             2168..>2883
                     /locus_tag="VFN38_15940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013316.1"
                     /translation="MAIPHKVCPAPRSTPGAGGRQCTPECALPPDVLREASRRLGIMS
                     LIGAALWLAGTTLGHLSARAAGDGGAPWTTLSWIDGIAAISIAVSLALFAYTRRSERE
                     PGIILDLGLVYLVLTAFALGMMIHLAPPPAGWRIMPEISWIGAVVLMFAAVVPNAPRK
                     MSVAVLIAVSMNPLSMLLARARGVWDFGAASNVLLMHYPDYLLAGVAVVISQVVTKLG
                     QQVTRARDLGSYELGELLGRG"
BASE COUNT          394 a         1011 c         1046 g          432 t
ORIGIN      
        1 tggcggaagc gccgcgacgg tcgcggaggc ggcgggagcg ggggcggcgt accgagccgg
       61 cgccggcgtc acgggcgcgg gcattcccgc ctgcacgaag ctcgcggagc tggtcgccgc
      121 cgccgactgc acgggctgcg agcggagccc gatcgagtag cgcggcagga aggcgatccg
      181 gccgtcgagc acgatcccca cccagtcctt cgagtgattt tcgtcggagg ccagggcgaa
      241 cacctgcccc cgcgaaacct cctcgatgga gatgctcaac atcgacggcg cggtgcgcac
      301 gcggatggaa ggtgccgtca ccacgattga ctgcggacgg gcgcgggacg cggacgtccc
      361 ctgcgcgagg gccagggcgg gaacgcccgc tgtggcggcg acgagcagcg cggttcgcat
      421 cctcgaagac atcgcgacga agatcgacat gatcggttgg gtggaggttc gcgccatcgg
      481 aggccgcggg gccgcgtcgc gccgactgtg cgcgcggtca cattcgttgg actcgtactt
      541 cctcatagga aggacggcac gacgggggac gaggcaacgc ggcgggtgcc cgcgggcggt
      601 caccgcacga gcacgcggta cccgtgcgcc gggatctcga cgcgccctgc cggcgcgagc
      661 acgagcgggc gcttcgtgaa ccagtcggta tagcggccgg cccgcgccag tccgcgatac
      721 gccacggtca ccggcgcctc gccgaagttc accgccacga ccacggtgtt gggccccctg
      781 gtccgggtga acgcgtacac ccggtcgccc ccgtcggtgg ccagcgcggc ctgcgcgccg
      841 ccccaggcgc cgttcgccag cgcgggctgt cgatgcttga ggtcgaacac ggcgcggtag
      901 aagccggcca gcgacggccc ggtccagtcc acggtgtcct tctcgaagaa gcgcagccgc
      961 ttccgcaggc tcgcctcctg cccggtgtac aacagcggca tcgcgcggcg ggaggtggcg
     1021 ctcaggacga acgcggggag gtggttggcg cccatccgct cgagctcggt gccgttccag
     1081 ctgttctcgt cgtggttgct ggtgaaggtc atccgctacg tgtcgccgcc gaacaggctg
     1141 tcgtcgcggg cgaagtagcc gtcgagcgcg ccggtgctcg ccttgccccg cgcgatatcg
     1201 ttcagcaggt ggtggagccg ccacgcgtac gtcatgtcga acgcggcgtg gatgccgggg
     1261 tcctcggctt ccgcgagcat gaacagatcg gggcgcgacc gggtgagctc gcgccgagcc
     1321 tccacccaga acccggtggg cacgccgccg gcgacgtcgc agcggaagcc gtcgctcccc
     1381 atccggtcca cccaccagcg catgtcgccg atcatcgccc gccgcatccg cgcgtcgtcg
     1441 aagttcagct ccgcgacgtc cgtccagtcg gtgtcgcgac cctcgttgtc tcgcgcgttg
     1501 acgatggtgc catccgctcg cctgacgtag tactccgggt gctgctcgat ccacgggtgg
     1561 tcgaacgcgg tgtggttggc cacccagtcc aggatcacct tcatcccctg ccggtgcgcg
     1621 gcgcgcacga acgcccggaa gtcggcctcg ctcccgaact ccgggttgat ggccgtgtag
     1681 tcggcgatgg cgtagtagct gccgagcgtg cccttgcggt tcttcttccc gatgggctgc
     1741 accggcatga gccacaggat gtccacgccg aggcgccgca ggcgcggcag gtgccgctgg
     1801 agcgcgacga gcgtcccctc gggggtgtac tgccggacgt tgacctcgta gatcacggcg
     1861 tgccgcgacc aggcggggtg gcgcagcgcc cccgccgccg cgcgcgccgg cggctcgatc
     1921 cgcgccggct gctgtgccgg gctcggcgcg ggtcggagcg agaggcccgc cacggcgagc
     1981 aggggaagga gcgctggtct catgccgcgt caccggaaga gggatcggac cgtagtatgg
     2041 gagacgattc taggtggacc gggcggcgtg tccagtagcc ctctgcatcc gggagcgcac
     2101 gacgcgatcg cgtccgcaca cggcccgacg catctttcgg ttgtcgcgta cttcaacacc
     2161 caggcacatg gccatcccac acaaggtctg cccggcgccc cgcagcaccc ctggggcggg
     2221 cggcaggcag tgcacccccg agtgtgcgct tccccccgac gtgctgcgcg aggcgtcgcg
     2281 gcggctcggg atcatgtcgc tgatcggcgc cgcgctctgg ctcgcgggca ccacgctcgg
     2341 ccacctctcg gcgcgcgcgg ccggcgacgg tggcgcgccg tggaccaccc tgagctggat
     2401 cgacggcatc gcggccatca gcatcgcagt ctcgcttgcg ctgttcgcgt acacgcggcg
     2461 cagcgagcgc gagccgggga tcatcctcga cctcggcctg gtgtacctcg tgctgacggc
     2521 gtttgccctc ggcatgatga tccaccttgc gcctcccccg gcgggatggc gcatcatgcc
     2581 ggagatctcg tggatcggcg ccgtcgtgct gatgttcgcg gccgtcgtgc cgaacgcacc
     2641 gcgaaagatg tcggtcgctg tgctgatcgc cgtctcgatg aacccgctgt ccatgctcct
     2701 cgcgcgggcg cggggggtct gggacttcgg ggcggcgagc aacgtcctcc tgatgcacta
     2761 ccccgactac ctgctggccg gcgtcgcggt ggtcatctcc caggtcgtga cgaagctggg
     2821 acagcaggtc acccgcgcgc gcgacctggg gagctacgag ctgggcgagc tcctcggccg
     2881 cgg
//
LOCUS       DASSYW010001009         3130 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1355552, whole genome shotgun sequence.
ACCESSION   DASSYW010001009 DASSYW010000000
VERSION     DASSYW010001009.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3130)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3130)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3130
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1355552"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            238..2502
                     /locus_tag="VFN38_15945"
     CDS             238..2502
                     /locus_tag="VFN38_15945"
                     /inference="COORDINATES: protein motif:HMM:NF012321.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VIT domain-containing protein"
                     /protein_id="HET9013317.1"
                     /translation="MRRTLALLLLLAPLPLAAQGWIVPPGCEPVPCRPPVCAPERPCP
                     PTPCPVRRCPPVGGATIARTASDVRVALADRVLRYEVTEKFVNRGGGLGEADYFFPLP
                     AGAAFQDLKLSIDGKLVAGEVLDAAEARRIYEEIVRRQRDPALVEWAGSGLLRARIFP
                     IAPGEEKTVVVRFQSVARREGDAVRVDYSRGRRGAAPRGPSDGAAPGSFVLTYPAGDG
                     YGTPYSPTHTLRTSERGGERRVEAENATGDVTLLLPVARGERAAVSLLAHAPGGGDGF
                     ALVTVTPPARPARTAPRDVTFVVDVSGSMSGTKLEQAKAAGRQLLGTLGERDRFRVVD
                     FSTDVRSFRDGFVPATRANVAAAERYLESLEAQGSTNIAGALERALDPGSDAPGERRL
                     PLVLFVTDGEPTVGERDPDALARMAARLRGARRIFTFGLGADVNVRLLEQVALEGRGT
                     AHFVRPEESVERAVAIVASRLTAPVATDVVVRADGDGANGVRLTRAYPSGPVDLFAGQ
                     DLVLLARYSGTGPASLVVEGRDADGAPVRWAARATFPERERGNAFVARLWATQRVGYL
                     SAERRQRGASPELDAELRELGERYGIPTELTSYFVQEPGVLASGRGAVGGNVGVAQPA
                     APAAAMDRSLRFESAKRAAAQRQATTLAEAAADSTMATDGAETRRVNGRLFTLRAERW
                     TDARHRAGMPVVRIRAYGAAWFRLAELLPDARDALALGERVIVAGREVAIEVAPDGAE
                     TLDAGQERRIVDGW"
     gene            2587..3129
                     /locus_tag="VFN38_15950"
     CDS             2587..3129
                     /locus_tag="VFN38_15950"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HET9013318.1"
                     /translation="MHDVDRLFRLYHDPLVRYLTRRLGDRDWAEEVAQETFLRALRQE
                     SIASERSWLFAVATNLVRDEARRDARRRRHLELLVQEERAREEEEPDGGQLVSLEEER
                     ERAREAALARRAVDALAERDRLALLMREEGLDYTEIAEALGLSVGSIGTTLSRARRRL
                     AETYEALRDAGPERSGNAAS"
BASE COUNT          381 a         1143 c         1206 g          400 t
ORIGIN      
        1 tccctgaccc tggaccagtc acactgccga tccgtagcag ttccaggtcc caggtccctg
       61 gggcggaccc atcgagatgc cagcccaccc cggtaccaga tccctgcgcc ggacgcgttt
      121 cgatgaaggc cgccccaggt gccggctact cgcaccagac gactccgacg cccggagcct
      181 gtgcaagccg gcagcgcgac gacgtctccc atgtgactcc ctcctccagg aactcacatg
      241 cgtcgcaccc tcgcgctcct cctgctcctc gccccgcttc cgctcgccgc tcaggggtgg
      301 atcgtcccgc ccggctgcga gccggtgccc tgccggccgc cagtgtgcgc gcccgagcga
      361 ccctgtccgc cgacgccctg tccggtgcgc cgctgtccgc cggtcggcgg cgcgacgatc
      421 gcgcgcacgg cgagcgacgt ccgcgtggcc ctcgccgacc gcgtgctgcg ctacgaggtg
      481 acggagaagt tcgtgaatcg cggcggcggg ctcggcgagg ccgactactt ctttcccctg
      541 ccggcgggag cggcgttcca ggatctcaag ctctcgatcg acggcaagct cgtcgccggc
      601 gaggtgctcg acgccgccga ggcgcggcgc atctacgagg agatcgtgcg acgccagcgc
      661 gatccggcgc tcgtcgagtg ggccggctcc gggctcctgc gggcgcgcat ctttccgatc
      721 gcgcccggcg aggagaagac tgtcgtcgtg cgcttccaga gcgtcgcccg ccgcgagggg
      781 gacgcggtgc gcgtggacta ctcgcgcggc aggcgaggcg cggcgccgcg cggcccgtcc
      841 gacggcgcgg ccccggggtc cttcgtcctc acctaccccg ccggggacgg ctacggcacc
      901 ccctattccc ccacccacac gctgcgcacg agcgagcggg gtggcgagcg gcgggtggaa
      961 gccgagaacg ccaccgggga cgtcaccctg ctcctgccgg tggcgcgcgg cgagcgcgcc
     1021 gcggtctcgc tgctggccca cgcgccgggc ggcggcgacg gcttcgcgct cgtcaccgtg
     1081 acgccccccg cgcgtccggc gcgcaccgcg ccgcgcgacg tcaccttcgt cgtggacgtc
     1141 tcgggctcga tgtcggggac gaagctcgag caggcgaagg cggcggggcg ccagctcctc
     1201 ggcacgctcg gcgagcgcga ccgcttccgc gtcgtggact tctcgaccga cgtgcgaagc
     1261 ttccgcgatg gcttcgtgcc ggcgacgcgc gccaacgtcg ccgccgccga gcgctatctc
     1321 gaatcgctcg aggcgcaggg ctcgacgaac atcgccggcg cgctggagcg ggcgctcgat
     1381 ccgggcagcg acgcgcccgg cgagcggcgg ctccccctcg tgctcttcgt caccgacgga
     1441 gagccgacgg tcggggagcg cgatcccgac gctctcgccc ggatggcggc gcggctgcgc
     1501 ggcgcgcggc ggatcttcac cttcgggctg ggcgccgacg tcaacgtccg gctgctcgag
     1561 caggtggcgc tcgagggacg gggcaccgcg cacttcgtgc ggccggagga atcggtggag
     1621 cgggcggtgg cgatcgtcgc cagccggctc acggcgccgg tggcgaccga cgtcgtggtg
     1681 cgcgctgacg gcgacggagc gaacggcgtg cggctgacgc gcgcctatcc gagcggcccg
     1741 gtggatctct tcgcggggca ggacctcgtg ctgctcgccc gctactcggg caccggcccc
     1801 gcgtcgctgg tcgtggaagg gcgtgacgcg gacggcgccc cggtgcgctg ggcggcgcgg
     1861 gcgacgttcc cggagcgcga gcgcggcaac gccttcgtgg cgcggctctg ggcgacccag
     1921 cgggtgggct acctgagcgc cgaacgacgc cagcgcggcg cgtcgccgga gctcgacgcc
     1981 gagctgcgcg agctcgggga gcgctacggc atccccaccg agctgacctc gtacttcgtg
     2041 caggagccgg gtgtgctggc cagcggccgt ggcgcggtgg gaggcaacgt cggcgtggcg
     2101 cagccggccg cgccggccgc ggcgatggat cgctcgctcc gcttcgagtc ggcgaagcgc
     2161 gccgccgcgc agcgccaggc cacgacgctc gccgaggcgg ccgccgacag cacgatggcg
     2221 acggacggag cggagacgcg ccgcgtgaac ggccgcctct tcacccttcg ggccgagcgc
     2281 tggaccgacg cccggcaccg cgccggcatg ccggtggtgc gcatccgcgc ctacggggcc
     2341 gcctggttcc ggctcgccga gctgctcccc gacgcgcgcg acgcgctggc cctcggcgag
     2401 cgcgtcatcg tcgccggccg cgaggtcgcg atcgaggtcg cgccggacgg cgcggagacg
     2461 ctggacgcgg ggcaggagag gcgcatcgtg gatgggtggt gatcggccgg cggtgggcgg
     2521 tgggcgtccg atatccggcg ctcactgccc atagccggga gccgatggcc gagcgaactt
     2581 ctgatcatgc acgacgtcga ccgtctcttc cgcctctacc acgatccgct cgtgcgatat
     2641 ctcacgcgcc ggctcggcga ccgcgactgg gccgaggagg tcgcgcagga gaccttcctg
     2701 cgggcgctcc gccaggagtc gatcgccagc gagcggtcgt ggctgttcgc ggtggcgacc
     2761 aacctggtac gcgacgaggc acggcgcgac gcgcggcgcc ggcggcatct cgagctgctg
     2821 gtgcaggagg agcgggcgcg cgaggaggag gagcccgacg gcgggcagct cgtctcgctc
     2881 gaggaggagc gcgagcgggc gcgcgaggcg gcgctggcgc ggcgcgcggt ggatgcgctc
     2941 gccgagcggg accggctggc gctgctgatg cgcgaggagg gactggacta cacggagatc
     3001 gccgaggcgc tggggctctc ggtcggctcc atcgggacga cgctgtcgcg ggcgcggcgg
     3061 cgactggccg agacgtacga ggcgctccgc gacgcggggc ccgagaggag tggcaatgcc
     3121 gcatcgtgac
//
LOCUS       DASSYW010001010         2412 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1172734, whole genome shotgun sequence.
ACCESSION   DASSYW010001010 DASSYW010000000
VERSION     DASSYW010001010.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2412)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2412)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2412
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1172734"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1357
                     /locus_tag="VFN38_15955"
     CDS             <1..1357
                     /locus_tag="VFN38_15955"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HET9013319.1"
                     /translation="LQRSAPLVRALSGRRAAILLPTSPAYLTALAAAEGRGAVLINPL
                     AAPAEIAFQCADANVGAVLTTESYAPRLPVNLPAVFLDDAPRTARVRVADTTRQVDLG
                     SHHGLTLEGERDVAGRDEEAAIVYTSAMRGIPLGAVLTHANLLSNARATIAAMAYTAD
                     DRVLALLPFSHLFGLTVTGTAALMAGAHVATMERFHPLKALEALASGITVVVGVPSVY
                     HALLAVAERRGVDLRGSALRICVCGGATLPVALQDRWAETTGVELRQGYGLTEAGPVC
                     LFNDLAHANARGTLGRPYPGVDVGIFPPADYAPDALRPAGADAMLPDGTAGEICVRGP
                     GVFRGYLHHGDAGLPRRGEWLCTGDRGVRNGDGTIRFLGLLKPMFTRNGFNVYPRELE
                     RAVSELRDVRRVEVRPIPEPVKENDIALRVEGAATEMEIRRWCEWRLSAYKQPGVIET
                     V"
     gene            complement(1361..>2412)
                     /locus_tag="VFN38_15960"
     CDS             complement(1361..>2412)
                     /locus_tag="VFN38_15960"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HET9013320.1"
                     /translation="LRQVLMHLMKNDGYSCVEAGNGEEALALLQEHPITLVMSDLRMP
                     KMDGLELLRQVRARWPDVAVVMITAVADVEVAVSCLAIGAMDYLTKPFHLEEVRARVA
                     QALENRRLVIENRGYQESLQEKVAVQARRLEELFMASIQSLAEVLELKDPYTRGHSVR
                     VSEYSAVIARELGIEGETLRQIELGGHVHDIGKIGVREEVLNKPGKLTDVEYEHIMTH
                     PVVGWRILAPLLAETPVALNIVRSHHERFDGRGVPDQLAGAAIPLEARIAAAADAFDA
                     MTSDRPYRPDGLSVADAIKDLVRCSGTQFDPDVIAALVRASNAGRLNVVRRPTAPRGV
                     AIVHRVAPVAAKQPA"
BASE COUNT          321 a          925 c          800 g          366 t
ORIGIN      
        1 gctccagcgc agcgcgcccc tcgttcgcgc cctgagcgga cgccgcgccg ccatcctcct
       61 ccccacctca ccggcgtatc tcaccgcgct cgcggcggcg gagggacgag gcgcggtgct
      121 gatcaatccc ctggccgccc cggcggagat cgcgttccag tgtgccgacg cgaacgtggg
      181 cgccgtgctc accaccgagt cgtacgcccc tcggctcccc gtgaacctgc ccgccgtctt
      241 tctcgacgac gcgccgcgca cggcgcgcgt ccgcgtcgcc gacaccacgc ggcaggtcga
      301 cctcggctcg catcacggcc tcacgctgga gggcgagcgc gacgtcgccg gccgcgacga
      361 ggaggcggcc atcgtctaca cctccgccat gcgcggcatt ccgctcggcg ccgtgctcac
      421 gcacgccaac ctgctctcca acgcgcgggc gacgattgcg gccatggcct acacggccga
      481 cgaccgcgtg ctcgcgctgt tgccgttctc gcacctgttc gggctcaccg tcaccggcac
      541 cgcggcgctc atggccggtg cgcacgtcgc cacgatggag cgctttcatc ccttgaaggc
      601 gctcgaggcg ctcgcgtcgg ggatcacggt ggtggtcggt gtgccgtccg tctaccacgc
      661 gctgctcgcc gtcgccgagc ggcgcggcgt ggacctgcgc gggagcgcgc tgcgcatctg
      721 cgtgtgcggc ggtgccacac tccccgtggc gctgcaggac cggtgggccg agacgaccgg
      781 cgtcgagctg cgacagggct acgggctcac cgaggcggga ccggtgtgcc tgttcaacga
      841 cctcgcgcac gcgaacgcgc gcggcacgct cggccggccc taccccggcg tcgacgtcgg
      901 catctttccg ccggcggact atgcgcccga tgcgctgcgc cccgcgggcg ccgacgcgat
      961 gctgcccgac gggaccgccg gcgagatctg cgtgcgcggg ccaggcgtct ttcggggcta
     1021 cctgcaccac ggcgacgccg gtcttccgcg tcgcggcgaa tggctctgca cgggcgaccg
     1081 cggcgtgcga aacggcgacg gcaccatccg ctttctcggc ctgctcaagc cgatgttcac
     1141 gcgcaacggc ttcaacgtct atccgcgcga gctggagcgg gccgtgagcg agctgcgcga
     1201 cgtgcgccgc gtcgaggtgc ggccgatccc cgagccggtc aaggagaacg acatcgccct
     1261 gcgcgtcgag ggcgccgcga ccgagatgga gattcgtcgc tggtgcgaat ggcgcctcag
     1321 cgcctacaag cagcccgggg tgatcgagac cgtctgaccg tcaggctggc tgcttcgccg
     1381 ccaccggcgc cacccggtgg acgatcgcca cgccgcgcgg cgccgtcgga cgccgcacca
     1441 cgttgagccg tcccgcgttc gaggcacgca ccagcgcggc gatgacgtcg gggtcgaact
     1501 gcgtgccgct gcaccgcacg aggtccttga tcgcatcggc cacgctgaga ccatccggac
     1561 gatagggccg gtcgctcgtc atcgcgtcga acgcgtccgc cgccgcggcg atccgtgcct
     1621 cgagcggaat cgccgcgccc gcgagctgat ccggcacgcc acggccgtcg aaccgctcgt
     1681 gatgcgaccg cacgatgttc agcgcgaccg gcgtctcggc gagcaggggc gcgaggatgc
     1741 gccagcccac caccgggtgc gtcatgatgt gctcgtactc cacgtcggtg agcttgccgg
     1801 gcttgttcag cacttcctcg cgtacgccga tcttgccgat gtcgtgcacg tgcccgccaa
     1861 gctcgatctg ccgcagcgtc tccccctcga tgccgagctc gcgcgcgatg accgccgagt
     1921 attcgctcac gcgcaccgaa tggccgcgcg tgtacgggtc cttgagctcg agcacctcgg
     1981 cgagcgactg gatgctcgcc atgaacagct cctcgagccg gcgcgcctgc accgccacct
     2041 tctcctgcag gctctcctga tagccgcggt tctcgatcac gagacgccgg ttctccagcg
     2101 cctgcgccac gcgcgcccgc acctcctcga ggtggaatgg cttggtgagg tagtccatcg
     2161 cgccgatcgc gaggcagctc accgcgacct ccacgtccgc caccgccgtg atcatcacca
     2221 ccgccacgtc gggccagcgt gcgcgcacct gccgcagcag ctccaggccg tccatcttcg
     2281 gcatccgcag gtcgctcatc acgagcgtga tcggatgctc ctgcagcagc gccagcgctt
     2341 cttcgccgtt ccccgcctcg acgcacgagt atccgtcgtt cttcatcagg tgcatgagca
     2401 cctggcggag cc
//
LOCUS       DASSYW010001011         2090 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1119773, whole genome shotgun sequence.
ACCESSION   DASSYW010001011 DASSYW010000000
VERSION     DASSYW010001011.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2090)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2090)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2090
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1119773"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..664)
                     /gene="groEL"
                     /locus_tag="VFN38_15965"
     CDS             complement(<1..664)
                     /gene="groEL"
                     /locus_tag="VFN38_15965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HET9013321.1"
                     /translation="MASKELHFNVDARAALKRGVDQLAEAVKVTLGPKGRNVVIDKKF
                     GAPTVTKDGVTVAKEIELSDPLENMGAQMVKEVATKTSDIAGDGTTTATVLAQAIFRE
                     GLKNVTAGSNPMAIKRGIDKAVTAVIEELKRISVPTTGKKEIAQVGAISANNDREIGD
                     LIAEAMEKVGKDGVITVEEAKGLDTTLETVDGMQFDRGYVSPYFVTDPEKMEAVLEDA
                     MIL"
     gene            complement(691..975)
                     /locus_tag="VFN38_15970"
     CDS             complement(691..975)
                     /locus_tag="VFN38_15970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005858788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HET9013322.1"
                     /translation="MKITPLSDRVVVKASEDTEQMRGGLYIPDTAKEKPQQGEIIAAG
                     PGKYEDGKLVPMSVKVGDKVLYGKYSGTEITLDNEQFLILRESDVLAVVS"
     gene            complement(1216..1998)
                     /locus_tag="VFN38_15975"
     CDS             complement(1216..1998)
                     /locus_tag="VFN38_15975"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: protein motif:HMM:NF009855.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III pantothenate kinase"
                     /protein_id="HET9013323.1"
                     /translation="MLLTFDVGNSETTLGLFDGDTLRAHWRLMTDVVRSADEFGVLLR
                     GFLAREQIAVSEVHGVAIGSVVPRVTQPLADACRDWLSARRIEVVDATSPLPITLAVD
                     EPRTVGADRIINTLVASRRYGRDAIVVDLGTATTFDCITKDAVFLGGVIAPGVRTSAE
                     TLFRRTSKLPATELVAPARTIGANTEDCIRAGVMFGAAESIDGIVRRIIAEWPGTERP
                     IVVGTGGLAEVFAPLVTCFDAVDPYLTLRGLALAFGLLDGGG"
BASE COUNT          314 a          722 c          691 g          363 t
ORIGIN      
        1 tcaggatcat ggcgtcctcg aggacggcct ccatcttctc cggatccgtg acgaagtacg
       61 gcgagacgta gccgcggtcg aactgcatgc cgtccaccgt ctcgagcgtc gtgtcgaggc
      121 ccttcgcctc ctccaccgtg atcacgccgt ccttgccgac cttctccatc gcctcggcga
      181 tgaggtcgcc gatctcccgg tcgttgttcg ccgagatggc gccgacctgg gcgatctcct
      241 tcttgcccgt cgtcgggacg ctgatccgct tcagctcctc gatcacggcc gtcacggcct
      301 tgtcgatgcc gcgcttgatc gccatcgggt tcgagcccgc ggtgacgttc ttgagcccct
      361 cgcggaagat cgcctgggcg agcacggtcg ccgtcgtcgt gccgtcgccg gcgatgtccg
      421 acgtcttggt cgcgacttcc ttcaccatct gcgcgcccat gttctcgagc ggatcggaca
      481 gctcgatctc cttcgccacc gtcacgccgt ccttggtgac cgtcggcgcg ccgaacttct
      541 tgtcgatgac gacgttccga cccttcggac cgagggtgac cttcaccgcc tcggcaagct
      601 gatcgacacc gcgcttgagc gccgcgcgcg catcaacgtt gaaatgcagt tccttgctag
      661 ccatgttgag cctctatgcg ttggcagtga ttaggagacg accgcgagga cgtcggactc
      721 gcggaggatc agaaactgct cgttgtcgag cgtgatctcg gtgccgctgt acttcccgta
      781 gagcaccttg tctccaacct tgacggacat cgggacgagc ttgccgtcct cgtacttgcc
      841 cggacccgcg gcgatgatct cgccctgctg cggcttctcc ttcgccgtgt cggggatgta
      901 gagtccaccg cgcatctgct cggtgtcctc cgatgccttc acgacgaccc ggtcggacag
      961 cggggtgatc ttcacgccgg ccgcgctctt ggtggccata ggtaatgcgc ctccgtctcg
     1021 tattgcggtg aaaataattt ggcagttggc cttagcactc aacaaacagg agtgctaaca
     1081 gtccggataa tatggcgccc catcccgcgg ggcaagggga ggcaccggag gcgcgctggc
     1141 cgcagcgtgg tcgcgcaagt cgttgtccgg caaatacttg gcgggcgcta ccgccggaca
     1201 gccgcggagg gtccgtcagc cgccgccgtc gagcagcccg aacgcgagcg ccagtccgcg
     1261 cagggtgaga tacgggtcca ccgcgtcgaa acaggtcacc aggggggcga acacctccgc
     1321 cagcccgccc gtgcccacca cgatgggccg ctccgtcccc ggccactccg cgatgatccg
     1381 acgcacgatg ccgtcgatcg actcggcggc gccgaacatc accccggcgc gaatgcagtc
     1441 ctcggtgttc gcgccgatcg tccgggctgg ggcgaccagc tcggtggccg gcagcttgga
     1501 ggtccgccgg aagagcgtct cggccgaggt ccgcacgccc ggggcgatca cgccgcccag
     1561 gaacacggcg tccttggtga tgcagtcgaa ggtggtggcc gtgccgaggt ccacgacgat
     1621 cgcgtcgcgc ccgtagcgcc ggctcgcgac gagggtgttg atgatccggt cggcgcccac
     1681 cgtgcgcggc tcgtccaccg ccagggtgat cggcagcggg gaggtggcgt ccaccacctc
     1741 gatccgccgc gccgacagcc agtcgcggca ggcgtccgcc agcggctgcg tcacgcgcgg
     1801 gaccaccgac ccgatggcga cgccatgtac ctcgctcacg gcgatctgct cgcgcgcgag
     1861 gaagccgcgc agcaggacgc cgaactcgtc ggcggagcgc acgacgtcgg tcatcagccg
     1921 ccagtgagcg cggagcgtgt cgccgtcgaa caggccgagg gtggtctccg agttgccgac
     1981 gtcgaaggtg aggagcatgc gggctatccg gcgaaggtga gggaaccggt acggtagcgc
     2041 gcgagctggc cggcggcatc cgccacgagg agctcgccct cgcgcgtgat
//
LOCUS       DASSYW010001012         2549 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_784072, whole genome shotgun sequence.
ACCESSION   DASSYW010001012 DASSYW010000000
VERSION     DASSYW010001012.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2549)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2549)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2549
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_784072"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..423)
                     /gene="uppS"
                     /locus_tag="VFN38_15980"
     CDS             complement(<1..423)
                     /gene="uppS"
                     /locus_tag="VFN38_15980"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl diphosphate synthase"
                     /protein_id="HET9013324.1"
                     /translation="MQTSRNAGAPATPPSFDGPHLAIIMDGNGRWATAHGRSRSAGHE
                     AGLRTARNIVEAAVREGVGTLTLYAFSSDNWKRPGAEVTALMRLFRRALVGEAKRCLE
                     NGVRLTILGRRDRLPSSLRHTVEQVEALTSAGARMHLRV"
     gene            complement(431..847)
                     /locus_tag="VFN38_15985"
     CDS             complement(431..847)
                     /locus_tag="VFN38_15985"
                     /inference="COORDINATES: protein motif:HMM:NF024988.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HET9013325.1"
                     /translation="MAKHGAAKHETEGTRPRARGTGALQSVDGGDAGRRGEETEGALA
                     LDRLIHERMRLGIVSALAVNDTLTFNDLKRLMHTTDGNLSVHARKLEDAAYVTCTKTF
                     EGRVPRTEYRLTATGRRALERYLDHMEALIRATRER"
     gene            complement(840..1448)
                     /locus_tag="VFN38_15990"
     CDS             complement(840..1448)
                     /locus_tag="VFN38_15990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013326.1"
                     /translation="MTRVLPLRPAEPPEMQARAMDNLRFIRETMAAAATFTAVSGWGT
                     MLIGATALVAAGIAAMTVSTTRWVFIWMCEAVLSVGISMYTMTLKARANGLPLWSEPA
                     RKIVFSFAPPMSVGALLTLVCYERDLLGLLPGVWMLLYGVGVVAAGTFSVRIVPVMGV
                     AFMAVGTVALFAPPSWTTACMAAGFGGLHLFFGALIARRHGG"
     gene            complement(1549..2199)
                     /locus_tag="VFN38_15995"
     CDS             complement(1549..2199)
                     /locus_tag="VFN38_15995"
                     /inference="COORDINATES: protein motif:HMM:NF014068.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 glutamine amidotransferase
                     domain-containing protein"
                     /protein_id="HET9013327.1"
                     /translation="MGTELKGRRVAILATDGVEQVELEEPRRALDAAGAVTHLIAPRE
                     GSIQAMNHDEQGARLPVDRVLAEVRPSDYDALLLPGGVANPDRLRMDQRAVQFVREFM
                     LADKPVAAICHGAWMLVEANAVAGRTLTSWPSLQTDIRNAGGEWVDEKVRVDDRLITS
                     RKPDDLPDFCATILREFASSIQVDERLSLVGEQSFPASDPPPGPSAIGGEGAAKST"
     gene            2296..>2549
                     /locus_tag="VFN38_16000"
     CDS             2296..>2549
                     /locus_tag="VFN38_16000"
                     /inference="COORDINATES: protein motif:HMM:NF024575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013328.1"
                     /translation="MPLLPIHGHATLRARFDDAIRRDALPGSLLLHGPLGVGKQRLAL
                     WLGQRLLCNGPEPRPCGTCQHCRYALAGTHPDLHWFFPRPR"
BASE COUNT          358 a          981 c          838 g          372 t
ORIGIN      
        1 gacacggagg tgcatgcgcg caccggcgga ggtgagcgct tccacctgct ccacggtgtg
       61 gcggagcgac gaagggagcc ggtcgcgccg gccgaggatc gtgaggcgga cgccgttctc
      121 gaggcagcgc ttcgcctcgc ccaccagcgc gcgccggaac aggcgcatca gcgccgtcac
      181 ctcggcgccc ggccgcttcc agttgtccga cgagaaggcg tagagcgtga gggtgccgac
      241 gccctcccga acggccgcct ccacgatgtt gcgggccgtc cgcagcccgg cttcgtggcc
      301 ggcggagcgc gaccgcccgt gcgccgtggc ccaccgtccg ttgccgtcca tgatgatggc
      361 caggtgcggg ccgtcgaagc tcgggggggt ggcgggcgcc ccggcgttgc gcgatgtctg
      421 catgcccgga tcagcgctca cgcgtggcgc ggatgagcgc ctccatgtgg tcgagatacc
      481 gctcgagcgc ccggcgcccc gtcgcggtca accggtactc cgtcctgggc acgcgcccct
      541 cgaacgtctt ggtgcaggtc acgtacgccg cgtcctcgag cttgcgggcg tggacgctga
      601 gattgccgtc cgtggtgtgc atcaggcgct tcagatcgtt gaacgtgagc gtgtcgttca
      661 cggccagcgc gctcacgatc ccgagccgca tgcgctcgtg gatgagccgg tccagggcga
      721 gcgcgccctc cgtctcctcg ccgcgccggc ccgcgtctcc cccgtccacc gactggagcg
      781 cgcccgtgcc gcgggcgcgg gggcgcgtcc cctccgtctc gtgcttcgcc gctccgtgct
      841 tagccaccgt gcctccgcgc gatgagcgcg ccgaagaaaa gatgcagtcc accgaacccc
      901 gcggccatgc aggccgtcgt ccacgacggg ggcgcgaaca gcgccaccgt gcccaccgcc
      961 atgaacgcga cgcccatgac gggcacgatg cgcaccgaga aggtgcccgc cgccacgacg
     1021 ccgacgccgt acagcagcat ccacacgccc gggagcagcc cgagcagatc gcgctcgtag
     1081 cacacgagcg tgagcagcgc gcccaccgac atgggcggcg cgaagctgaa cacgatcttg
     1141 cgcgccggct ccgaccagag cggcagcccg ttggcgcgcg ccttcagcgt catggtgtac
     1201 atcgagatgc ccaccgagag gacggcttcg cacatccaga tgaacaccca gcgcgtcgtg
     1261 ctgaccgtca tcgcggcgat gcccgccgcg acgagcgccg tggcgccgat gagcatggtc
     1321 ccccaccccg acacggcggt gaaggtcgcc gccgcggcca tcgtctcgcg aatgaagcgg
     1381 agattgtcca tcgcccgcgc ctgcatctcg ggcggctcgg cgggacggag cgggagtacg
     1441 cgcgtcatgg accggagaat gtcggaatcg gggcgatctg tcaagtgctt tacgctgtaa
     1501 agttagccat ggcggcgtcc cccgcacgag gacgccgcca gcacgcgctc aggtcgactt
     1561 cgccgccccc tcgccgccga tcgcgctcgg cccgggaggc ggatcgctcg ccggaaagct
     1621 ctgctcgccc accagcgaca gccgctcgtc cacctggatg gagctcgcga actccctcag
     1681 gatcgtcgcg cagaagtccg gaaggtcgtc tggcttccgg ctggtgatca ggcggtcgtc
     1741 cacccggacc ttctcgtcca cccactcccc acccgcgttg cggatgtccg tctggaggct
     1801 cggccacgag gtgagggtcc gcccggccac cgcgttcgcc tccaccagca tccaggcacc
     1861 atggcagatc gccgccaccg gcttgtccgc cagcatgaac tcgcggacga actgcacggc
     1921 gcgctggtcc atccggagcc ggtccgggtt cgccacccca cccggcagca gcagcgcgtc
     1981 gtaatcgctc ggccggacct cggcgagcac gcgatccacc ggcaggcggg ccccctgctc
     2041 gtcgtggttc atcgcctgaa tcgagccctc ccgcggggcg atcagatggg tcaccgcccc
     2101 tgccgcgtcc agcgcgcggc gcggctcctc cagctccacc tgctccactc cgtcggtcgc
     2161 gagaatggcg acgcgtcgtc ccttcagctc cgtacccatc gaggcctcct ctgaaagctg
     2221 gctcgccctt gcgtcatgat ccatgcctgc acgcggctct tggccgccga ctgcgccgcg
     2281 aaatagcttc cattcgtgcc cctgctcccc atccacggcc acgccaccct tcgcgcccgg
     2341 ttcgacgacg cgatccgccg cgatgccctc cccggctccc tgctgctgca cggacccctg
     2401 ggggtcggca agcagcggct cgcgctctgg ctggggcagc gcctgctctg caacggtccc
     2461 gagcctcgcc cctgcggcac ctgccagcac tgccggtacg cgctcgcggg cacgcacccg
     2521 gacctccatt ggttcttccc gcgcccacg
//
LOCUS       DASSYW010001013         2154 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1429017, whole genome shotgun sequence.
ACCESSION   DASSYW010001013 DASSYW010000000
VERSION     DASSYW010001013.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2154)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2154)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2154
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1429017"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1035
                     /locus_tag="VFN38_16005"
     CDS             <1..1035
                     /locus_tag="VFN38_16005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013329.1"
                     /translation="TSFYGNLTALAESPKKEGLLYAGTDDGLIQVTESGGGSWRQIDT
                     FPGVPEHSYVTDVYASPRDSNVIFVTLNNYLRGDFKPYIVRSNDRGRTWTQIAGDLPQ
                     RSGVWSIVQDDIDGNLLFAGLEFGVWFTVDGGARWVQLDGGIPTAQARDLVMQRREND
                     LVVGTFGRGAYILDDYSALRDVTPEALAEEGHLFPLRDAYMYDVLGQVEATWGDPTTP
                     NPPYGALFTYSAGQAPAGESKLVLTIADDTGKQVRRLELAREPGVHRVAWDLRGEVPP
                     AAPGGAAAAGRGGRGGETLEAAQFFGRGRQGGPPSAPGRYRATLGKLTGDTVTPIGQP
                     QTFLIVPLSK"
     gene            complement(1194..>2154)
                     /locus_tag="VFN38_16010"
     CDS             complement(1194..>2154)
                     /locus_tag="VFN38_16010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013330.1"
                     /translation="QSGGRATLDAQALAPGLARMGADLAAYYVLTYQPAQADGRFHPI
                     EVRAKRRDAAVQVRSGYWAPLGSEWRTMVAKTSKIASPLSTRPLRKSRLIDTWLGLLP
                     VPGSRTRLVITWEPRVRGLAAPEVVALHAKTTDGTVLFDGRIARVGSDGALPPDSARF
                     EVPTGRVELDMSIYDMEGKLIDTDVRDFDVPDLGAQKRGPVLLAPEVVRARTLRDFNS
                     ASSNPDAAPASVRTFARADRLLIRVPAFDTSGAAVQVTAKVLNAWGQPMRDIDAIGAT
                     PRDGVAQFALPLSWLVPGQYQIELQGTNQNGAVKERVSFKVSG"
BASE COUNT          359 a          747 c          724 g          324 t
ORIGIN      
        1 acgtccttct acggcaacct cacggcgctc gccgaatcgc cgaagaagga gggcctgctg
       61 tacgccggaa ccgacgacgg cctgatccag gtgaccgaga gcggcggcgg cagctggcgg
      121 cagatcgaca cgttccccgg cgtgccggag cacagctacg tcacggatgt gtatgcctcg
      181 ccgcgcgact cgaacgtcat cttcgtcacg ctgaacaact acctgcgcgg cgacttcaaa
      241 ccctacatcg tccggagcaa cgaccgcggg cgcacatgga cgcagatagc cggggatctt
      301 ccgcagcgct ccggcgtctg gtcgatcgtg caggacgaca tcgacggcaa ccttctgttc
      361 gcaggactgg aattcggcgt ctggttcacg gtcgacgggg gagcccgctg ggtgcagctc
      421 gacggcggca tccctacggc gcaggcgcgc gatctcgtca tgcaaaggcg cgagaacgat
      481 ctcgtcgtcg gcacgttcgg tcggggcgcc tacatcctgg acgactacag cgccctgcgc
      541 gacgtcacgc cggaggcgct cgcggaagaa ggacatctct tcccgttgcg agacgcgtac
      601 atgtacgacg tcctcggcca ggtcgaagcc acctggggag atccgacgac gccgaacccg
      661 ccatacggcg cgttgttcac gtactcggca ggacaggcgc ccgcgggcga gtcaaagctc
      721 gtgctcacca ttgcagacga tacaggcaag caggtgcggc ggctcgagct ggcaagagag
      781 ccgggcgtgc atcgcgtcgc gtgggatttg cggggtgaag tgccaccagc cgcaccgggc
      841 ggcgcggcgg cagccgggcg cggcggccgc ggcggagaga cgctggaggc ggcgcaattc
      901 ttcggacgcg ggcggcaggg cggcccgcca tctgcgccag gacgctaccg cgccacgctc
      961 ggcaagctga ccggcgacac ggtcacaccg atcggccagc cgcagacctt cctcatcgta
     1021 ccgctcagta agtagaacgt cgacacgacc accggcactt caaaccgcat tcgcgggtga
     1081 ccgcaacggg gcgccccgcg cggcgcggag gccactcctg tgatcagcgt ccttgaccga
     1141 gcaccgcgtg gggctgtttg cgggcaggac ccgctcatta aggtgaaggg cgctcagccg
     1201 ctcactttga acgaaacacg ttccttgacc gcgccgttct ggttggtgcc ctgaagctcg
     1261 atttgatact gtccgggaac gagccatgag agcggcagcg cgaactgcgc gaccccgtct
     1321 cgcggcgtcg cgccgatggc gtcgatgtcg cgcatcggct ggccccacgc attgaggacc
     1381 ttcgcggtga cctgcacggc ggcgccgctc gtgtcgaagg ccggcacgcg aatcagcaac
     1441 cggtccgctc tcgcgaacgt gcgcaccgac gccggtgcag catccgggtt gctgctggcg
     1501 ctgttgaaat cgcgcaacgt ccgcgcccgc acgacctcgg gcgcgagcag aacgggaccg
     1561 cgcttctgcg cgccgagatc cgggacgtcg aagtcgcgga cgtcggtgtc gatcagcttc
     1621 ccttccatgt cgtagatcga catgtcgagc tcgacgcgcc cggtcggcac ctcgaagcgc
     1681 gcactgtcgg gcggcagcgc gccgtccgag cccacgcgcg cgattcgccc gtcgaacagg
     1741 accgttccat cggtcgtttt cgcgtggagc gcgaccactt cgggcgccgc aaggccccgc
     1801 acccgcggtt cccacgtgat gaccaggcgc gtacgtgagc ccggtaccgg cagcagcccg
     1861 agccatgtat cgatcagcct gctcttgcgc aggggccgcg tggacagcgg cgacgcgatt
     1921 ttggacgtct tcgccaccat cgtgcgccac tcgctcccga gcggcgccca gtagccggag
     1981 cgcacctgca ctgccgcgtc acgccgcttc gcccgcacct cgatcggatg aaaacgtccg
     2041 tcggcctgcg caggctgata cgtgagcacg tagtaggccg cgaggtccgc gcccattcgc
     2101 gcgaggcccg gcgcgagcgc ctgtgcatcg agcgtcgcgc gtccaccgct ttgc
//
LOCUS       DASSYW010001014         5042 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_655187, whole genome shotgun sequence.
ACCESSION   DASSYW010001014 DASSYW010000000
VERSION     DASSYW010001014.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 5042)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5042)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5042
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_655187"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..709
                     /locus_tag="VFN38_16015"
     CDS             <1..709
                     /locus_tag="VFN38_16015"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HET9013331.1"
                     /translation="REILDVIAAFSADVGIVTLASELEGGIDLVRTLVAAGHRVSLGH
                     SAADFDQAIEAFDAGARHATHLFNRMPALAHRAPGLPGAALAREDVAAELICDGHHVH
                     PAMCRLAMSAKGARGILAITDGTAGAGMAVGSTARLGSRSIRVGPYAAELENGTLAGS
                     TLTMDRAFANIVNLFGGSLVDAALMCATNPARALGLAGHGVIAEGAVADLTLLDRHLR
                     VVRTFVGGADAYVAAGL"
     gene            772..1443
                     /locus_tag="VFN38_16020"
     CDS             772..1443
                     /locus_tag="VFN38_16020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013332.1"
                     /translation="MRAVSRQAAIALLLLAGAVAYTLASPRFRPAPVVELGLWFEPVT
                     FESNRLGTPLTPGELATIESVARQELRGAFNGLPITLSDRRAARYTLSVVQEVRDLRF
                     RRPVGVAGQSRGIAGFGGSGSVSFDFLANGAMAWAPEDASRGQLVAAIGRGIGRTAVH
                     EFTHQILPTAPIHDSRDEESYEFASAARRAQYGGAMRWNLAWPLLARQLGSSMLSAQE
                     PGGPP"
     gene            1440..2540
                     /locus_tag="VFN38_16025"
     CDS             1440..2540
                     /locus_tag="VFN38_16025"
                     /inference="COORDINATES: protein motif:HMM:NF013706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HET9013333.1"
                     /translation="MRRTILAVLAACGLASVFVGAQGPTPYKLGTFQRQGTTFVGVVI
                     RDTQVINLQVANAAVTTGQRITAPTDMKDLIARYDNGVRQRIVEIVNAVVTAKTRPAY
                     VMDLASLKVMPPIMYPMTMLNAAVNYREHAVEMAARGARPGDPPPGNAPGTAPPGTTS
                     ASGIWERARDDQRWNPYAFLKAPSAIIATNEAILVPRGRTEIDWECELGVVVGKQANH
                     VPVARAGDFIFGYTMEMDVSDRGSRGDQRYGSDWLIGKSHDTFAPMGPFITPKEFVPD
                     PRALPVKFVLNGTVMQDATTALMIHDVFELVAYGSSILTLRPGDVIATGSPAGVGSAR
                     RPPIYLKPGDKTSCTYEGIGTLVNNVEAAPAS"
     gene            2553..2855
                     /locus_tag="VFN38_16030"
     CDS             2553..2855
                     /locus_tag="VFN38_16030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013334.1"
                     /translation="MVVKRVGPLSVAKNAALLYAVLGLIIGAIFSLAAMAGAFSGFAG
                     EEGVGVAAGMAGLFGVGAIVIAPIMYACFGFIGALIMSVLYNIVASMVGGIELDVE"
     gene            complement(2866..3300)
                     /locus_tag="VFN38_16035"
     CDS             complement(2866..3300)
                     /locus_tag="VFN38_16035"
                     /inference="COORDINATES: protein motif:HMM:NF015735.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HET9013335.1"
                     /translation="MRFIITAHPGADSAAPDPSAPFDEQLFTAYMQFNEEMHRAGVLV
                     ASEGLNPAGKSAKVEVKRGRRTVVDGPFAESKELVGGFYVIEVGSIDEAIGWAMRCPT
                     GLGFDDVLEIRQLTGEEDLPPQLLDLVKKAAPTWSATFARRG"
     gene            3559..>5042
                     /locus_tag="VFN38_16040"
     CDS             3559..>5042
                     /locus_tag="VFN38_16040"
                     /inference="COORDINATES: protein motif:HMM:NF019135.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component regulator propeller
                     domain-containing protein"
                     /protein_id="HET9013336.1"
                     /translation="MILRRVRALLLCLLVWPVTAGADTAGGLSGYSITTWTEKEGLPA
                     GRIRAMAQSADGYLWLGLETGLVRFDGLRFVRFDHQLPSASLWSLMDARDHSLWIGLS
                     SSTPIARLHNGKMTLFGAAEGLPNTLAASFYEDRAGAIWAGTLSGLYRFTGQRWERVD
                     VGDPESTSVIGISEDGDGRLLAATPMGVYRRSAPGAAFELVARVAVASNVHFSFSSDR
                     AGTVWVSDFHDGFHRLDQGRRPAGADALKGWGLQLLHDRGGAMWVATQGQGLWRVPAN
                     PEAGAPAITVATMRDGLASEAVQALLEDREGNIWLGTPGGLQRLSPHRVTPRRDLGVA
                     RALEVTPDGAMWLGTSSGLKRFSGGETRLFTEADGLPGSVVLALHSGPRGELWVATEL
                     GVAIYENGRFTRLALPKDVNLPRIFAIATAGEDVWLRDFFFRLYHWRDGRLLPIDELP
                     EPFRTNVRSVHTDRRGQVWFGAGDGQIAVRDLKGAVTVRKMPVGG"
BASE COUNT          723 a         1736 c         1741 g          842 t
ORIGIN      
        1 acgcgagatc ctcgacgtga tcgccgcgtt cagtgccgac gttgggatcg tcaccctggc
       61 gtcggagctc gagggcggga tcgacctggt gcgcacgctg gtcgccgcgg gccaccgcgt
      121 atcgctcggg cactccgccg ctgacttcga tcaggcgatc gaggcgttcg acgccggcgc
      181 gcggcacgcc acgcatctct tcaaccgcat gccggcgctc gcgcaccgcg cgcccgggct
      241 gccgggcgcg gcgctggccc gggaggacgt tgcggcggag ctgatctgcg acggccacca
      301 cgtgcatcca gcgatgtgcc gtctggcgat gagcgccaag ggcgcccgcg gcatcctcgc
      361 catcaccgac ggcacggccg gcgccgggat ggccgtgggg tccacggcgc gtctggggtc
      421 gcgctcgatt cgtgtcggcc cctacgcggc ggaactcgag aacggcacgc tcgccggcag
      481 cacgctgacc atggaccgcg cctttgccaa catcgtcaac ctgttcggcg ggtcgctcgt
      541 ggacgcggcc ttgatgtgcg ccaccaaccc cgcccgcgcg ctgggcctcg cggggcacgg
      601 cgtcattgcc gagggtgcgg tggcggacct gaccctgctc gatcgccacc ttcgcgtcgt
      661 ccgcacgttc gttggcggag ccgacgcgta cgtagccgcc ggtctttaga ccggccccag
      721 cacgtagctg caggccttca ggcctgccat tcgaaccggt attctctcgg cgtgcgcgcg
      781 gtctcacgcc aggcggcaat cgcgctcctg ctccttgccg gcgccgtggc ctacacgctg
      841 gcgtcgcccc ggttccgccc cgcgcccgtc gtcgagctcg gactgtggtt cgagccggtc
      901 acgttcgagt ccaaccggtt gggcacgccg ctcacgcccg gtgagctcgc caccatcgag
      961 tcggtggcgc ggcaggagct tcgcggcgcg ttcaacgggt tgccgatcac cctctccgat
     1021 cgacgcgccg cccgatacac gctcagcgtc gttcaggagg tccgcgatct tcgcttccgc
     1081 cgcccggtgg gtgtggccgg acagtctcga ggcatcgcgg ggttcggcgg ttcaggcagc
     1141 gtgagcttcg acttcctggc caacggcgcc atggcctggg cgcccgagga cgcttctcgc
     1201 ggccagctcg tggccgcgat cggccgcggc atcggccgca cggccgtcca cgagttcacg
     1261 caccagatcc ttcccaccgc gccgatccac gacagccgcg acgaggagag ctacgagttc
     1321 gcatcggcgg cccgccgtgc gcaatacggc ggtgccatgc gctggaatct ggcgtggccg
     1381 ctgctcgcgc ggcaactcgg ttcgagtatg ctctcggctc aagaaccagg aggtccacca
     1441 tgaggcgcac gattctcgcc gtgctcgcgg cctgcgggct tgccagcgtg ttcgtcggag
     1501 cgcagggccc gacgccctac aagctcggga cgtttcagcg gcagggcacc acgttcgtcg
     1561 gcgtcgtcat ccgcgacacg caggtgatca acctgcaggt ggccaacgcg gccgtcacca
     1621 ccggccagcg catcaccgcg cccaccgaca tgaaggacct gatcgcgcgc tacgacaacg
     1681 gcgtgcgcca gcgcatcgtc gagatcgtca acgccgtcgt cacggcaaag acacgcccgg
     1741 cgtacgtgat ggacctcgcg tcgctgaagg tgatgccgcc catcatgtat ccgatgacga
     1801 tgctcaacgc cgccgtgaac taccgcgagc acgccgtgga gatggcggcg cgcggcgcgc
     1861 gcccgggaga tccgcctccc ggtaacgcac ccggcacggc gccgcccgga accaccagcg
     1921 cgtccggcat ctgggagcgc gcgcgggacg atcagcgctg gaatccgtac gcgttcctga
     1981 aggcaccgtc cgcgatcatc gcgacgaacg aagcgatcct ggtgccgcgc ggccgcaccg
     2041 agatcgactg ggagtgtgag ctgggcgtcg tggtgggcaa gcaggcgaac cacgtgccgg
     2101 tggcacgcgc cggcgatttc atcttcggct acacgatgga gatggacgtg tcggaccgcg
     2161 gcagccgcgg cgaccagcgc tacggctccg actggctgat cggcaagtcg cacgacacct
     2221 ttgcgccgat gggccccttc atcacgccga aggagttcgt gccggacccg cgggcgctgc
     2281 cggtgaagtt cgtcctcaac ggcacggtga tgcaggacgc caccacggcg ctgatgattc
     2341 acgacgtctt cgagctcgtc gcgtacggat cgagcatcct cacgctgcgg cccggcgacg
     2401 tcatcgccac cggcagcccc gccggcgtgg gctcggcgcg ccggcctccg atctatctga
     2461 aaccgggtga caagacctcg tgcacgtacg aaggcatcgg gaccctcgtt aataacgtgg
     2521 aggcagctcc ggcttcctag gaggaggaac agatggtcgt gaagcgtgtg ggtccacttt
     2581 cggtagccaa gaacgccgct ctgctctatg ccgtgttggg cctgatcatc ggcgcgatat
     2641 tttcgctggc cgccatggca ggcgcatttt cgggattcgc tggagaggaa ggcgtcggcg
     2701 ttgcggccgg catggcgggg ctgtttggcg ttggcgccat cgtgattgcc ccgatcatgt
     2761 acgcgtgctt cggcttcatc ggcgcgctca tcatgagtgt gctctacaac atcgtggcct
     2821 cgatggtcgg cggcatcgag ctggacgtgg agtagggcgc ggctttcagc cgcgccgagc
     2881 gaaggtggcg ctccaggtgg gcgccgcttt tttcacgagg tcgagcagct gcgggggaag
     2941 gtcctcttct cccgtcagct gccggatctc gagcacgtcg tcgaagccga ggccggtggg
     3001 gcagcgcatc gcccagccga tcgcctcgtc gatcgacccg acctcgatca catagaaccc
     3061 gccaaccagc tccttcgact cggcaaaggg gccgtccacc accgtgcggc ggccgcgttt
     3121 cacctccacc ttggcgctct tgccggccgg gttcagccct tccgacgcca ccagcacgcc
     3181 ggcccggtgc atctcctcgt tgaactgcat gtaagccgtg aacagctgtt cgtcgaacgg
     3241 cgcggacggg tccggggcgg cgctgtcggc tccggggtgg gcggtgatga tgaacctcat
     3301 acgaacgatc tcctttgaat gcgcgtctat cctcacgtcg aacagaggga atgcagatcg
     3361 acggacctta ggccttagac cttaggtctt gtggtcctta ggccctcccg tcccaaggcc
     3421 caaggccaaa ggccgagggt tctacctcca tttaggtatc ccagctggct ggaatccgtg
     3481 tgatctgttg agattggctg ggttggttga cggggccacg atgccggttc agaatccgtc
     3541 gccccctccg cagtgttcat gatcctgcgc cgcgttcgcg ctctgctgct ctgtctcctc
     3601 gtctggcccg tgacggccgg cgccgacacg gccggaggtc tgtccggcta ctcgatcacc
     3661 acctggacgg agaaagaagg gctgcccgcc ggtcgcatcc gcgccatggc gcagagcgcc
     3721 gacggctacc tgtggctcgg gctcgagacg ggcctcgtgc ggttcgacgg gctgcgcttc
     3781 gtgcgcttcg accaccagct cccgtccgcg tccctctggt cgctgatgga cgcgcgcgac
     3841 cacagcctgt ggatcggcct ctcgagcagc acgccgatcg cgcggctgca caacggcaag
     3901 atgacgctct tcggcgcggc cgaagggctg cccaacacgc tcgccgcgtc gttctacgag
     3961 gatcgcgccg gcgccatctg ggccggaacg ctttcgggtc tctatcgatt caccggccag
     4021 cggtgggaac gcgtggacgt gggcgatccc gagtcgacgt cggtgatcgg catatccgag
     4081 gacggcgacg gccggctgct tgcggcgacc ccgatgggcg tctaccgccg gtccgcgcct
     4141 ggcgcggcgt tcgagctcgt ggcgcgcgtg gccgtggcca gcaacgtgca cttcagtttt
     4201 tcgagcgacc gcgccggcac ggtgtgggtg agcgatttcc acgacgggtt ccaccgtctc
     4261 gatcagggcc gccggccggc gggtgccgac gcgctgaaag ggtggggcct gcagctgctt
     4321 cacgatcgcg gcggcgccat gtgggtggcc acgcagggac aaggtctgtg gcgcgtgccg
     4381 gccaatccgg aggcgggcgc gccggcgatc accgtcgcga cgatgcgcga cggcctcgcc
     4441 agcgaagccg tgcaggcgct gctcgaggat cgcgaaggca acatctggct cggcacaccc
     4501 ggcggcctgc agcggctgtc gccgcatcgc gtcacgccgc ggcgcgacct cggtgtggcg
     4561 cgcgcgctcg aagtgacgcc cgacggcgcg atgtggctcg gcacctcgtc gggcttgaag
     4621 cggttctcgg gcggcgagac gcgtctcttc accgaggccg atggtctgcc cggttcggtc
     4681 gtcctcgcgc tgcactccgg gccgcgcggc gagctgtggg tggccaccga gctgggcgtc
     4741 gcgatctacg agaacggccg cttcacgcgg ctggcgctgc ccaaggacgt gaacctgccg
     4801 cgcatcttcg ccatcgccac cgcgggcgag gacgtgtggc tgcgcgactt cttcttccgc
     4861 ctgtatcact ggcgcgacgg acgcctgctg ccgatcgacg aactgccgga gccgttccgc
     4921 accaacgtgc ggtcggtgca caccgatcgg cgcggacagg tgtggttcgg cgcgggcgac
     4981 ggtcagatcg cggtgcggga tctgaagggt gccgtcacgg tgcggaagat gccggtcggc
     5041 gg
//
LOCUS       DASSYW010001015         2634 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_712137, whole genome shotgun sequence.
ACCESSION   DASSYW010001015 DASSYW010000000
VERSION     DASSYW010001015.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2634)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2634)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2634
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_712137"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..949)
                     /gene="ppx"
                     /locus_tag="VFN38_16045"
     CDS             complement(<1..949)
                     /gene="ppx"
                     /locus_tag="VFN38_16045"
                     /EC_number="3.6.1.11"
                     /inference="COORDINATES: protein motif:HMM:TIGR03706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004309 - exopolyphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006798 - polyphosphate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exopolyphosphatase"
                     /protein_id="HET9013337.1"
                     /translation="MSEHTTLGAVDLGSNSFHLAIGRVVGEQVYPLDSLKETVRLGAG
                     ISAQKQLDDDVQERAFAALRRFSERLAGMPKGSVRAVGTNALRVARNARQFVRKAEET
                     LGFPIEVISGREEARLIYLGVVHSLPMAEHNRLVVDIGGGSTECIIGQKLKPRAMESL
                     YMGCVSYTERFFPGGKIDKKAMKNAELAAREQVQAIADRFETLGWKEAIGSSGTARSL
                     AEVMQKGGVAEQGITAAGLEWLREELLSAGDLKKLALAGLRDDRVPVIAGGAAIMSGV
                     FAELGLEEMKVAEGALRDGVLWDLLGRVHHRDIREVTVDQ"
     gene            980..>2634
                     /gene="ppk1"
                     /locus_tag="VFN38_16050"
     CDS             980..>2634
                     /gene="ppk1"
                     /locus_tag="VFN38_16050"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: protein motif:HMM:NF003918.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009358 - polyphosphate kinase complex
                     [Evidence IEA];
                     GO_function: GO:0008976 - polyphosphate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006799 - polyphosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 1"
                     /protein_id="HET9013338.1"
                     /translation="MAKKTAPKKKGATPKHDHFLNRELQALEFNRRVLAQAEDKGVPL
                     LERLKFLCIVSSNLDEFFEIRVSGLKEQIKLGAGATGPDGMMPIDVFRQVAARAQGIV
                     ERQYRLLNEEILPSLAKEGIRFLRRAEWTPSQGEWIRDYFFREMMPLLTPIGLDPAHP
                     FPRVFNKSLNFAVELEGRDAFGRDSRMAIVQAPRILPRVIRLPKGGAHGANDFIFLTS
                     ILHAHVGELFSGMNVLGCYQFRVTRNSDLFVEEEEVKDLRKALQGELPQRHFGDGVRL
                     EVADNMSEAMTRFLLTQFGLAGDDLYAVAGPVNLVRLMSIPEQVNRPDLEYAPFTPGL
                     PKPLAKGRDIFATIRKGDQLLHRPFQSFTPVIEFIREAARDPQVVAIKQTVYRTGTDS
                     VIMQTLIDAAQAGKEVTVVVELMARFDEEANINWSARLEEVGAHVVYGVVGHKTHAKM
                     ALVVRREEGKLVRYAHLGTGNYHPRTARHYTDFDLLTCREAVCADVNDVFQQLTGLGK
                     ATKHKHVWQSPFNLHQKVIEAIDNETRIAKSGKPARIVAKMNAL"
BASE COUNT          447 a          943 c          847 g          397 t
ORIGIN      
        1 actggtcgac ggtgacctcg cggatgtcgc gatggtggac gcgccccagc aggtcccaca
       61 ggacgccgtc gcgcagcgcg ccttcggcca ccttcatctc ttccaggccc agctccgcga
      121 acacgccgga catgatcgcc gcgccgccgg cgatgaccgg cacgcgatcg tcgcgcaggc
      181 ccgccagcgc gagcttcttc agatccccgg ccgacagcag ctcctcgcgc agccactcga
      241 gccctgccgc ggtgatgcct tgctcggcca cgccgccctt ctgcatcacc tccgcgagcg
      301 agcgcgcggt gcccgaggag ccgatcgcct ccttccagcc cagcgtctcg aagcgatccg
      361 cgatcgcctg cacctgctcg cgcgccgcga gctcggcgtt cttcatcgcc ttcttgtcga
      421 tcttgccgcc gggaaagaag cgctcggtgt agctcacgca gcccatgtag aggctctcca
      481 tggcgcgggg cttcaacttc tggccgatga tgcattcggt cgagccgccg ccgatgtcga
      541 ccaccagccg gttgtgctcc gccatgggca gcgaatgcac gacgccgagg tagatgagac
      601 gcgcttcctc gcgcccggag atcacctcga tggggaagcc aagcgtctcc tcggccttgc
      661 gcacgaactg ccgcgcgttc ctggccacgc gcagcgcgtt ggtccccacc gcgcgcaccg
      721 agcctttcgg catgccggcg aggcgctcgg aaaagcggcg cagcgcggcg aaggcacgct
      781 cctgcacgtc gtcgtccagc tgcttctgcg cggagatccc ggccccgagg cgcaccgttt
      841 ccttgagcga atcgagcggg tagacctgct cgccgacaac gcgcccgatg gcgaggtgga
      901 agctgttgga acccaggtcg acggcgccta acgtagtatg ttcgctcacg gctcaaagta
      961 tgacagcggc gcagacccga tggccaagaa aaccgccccc aagaagaagg gcgcgactcc
     1021 caagcacgat cacttcctga atcgcgagct gcaggcgctc gagttcaacc gccgcgtgct
     1081 cgcgcaggcg gaggacaagg gcgtgccgct gctcgagcgc ctcaagttcc tgtgcatcgt
     1141 ctcctcgaac ctggacgagt tcttcgagat ccgcgtctcg ggcctgaagg agcagatcaa
     1201 gctgggcgcc ggcgccaccg gccccgacgg catgatgccg atcgacgtct tccgccaggt
     1261 cgccgcgcgc gcgcagggca tcgtcgagcg acagtaccgg ctgctgaacg aggagatcct
     1321 gccgtcgctc gcgaaggaag gcatccgctt cctgcgccgc gcggaatgga cgccgtcgca
     1381 gggcgagtgg atccgcgact acttcttccg cgagatgatg ccgctcctca cgccgatcgg
     1441 gctcgatccc gcgcatccct tcccgcgcgt gttcaacaag agcctcaact tcgccgtgga
     1501 gctggaaggc cgcgacgcct tcggccgcga ctcgcgcatg gcgatcgtgc aggccccgcg
     1561 catcctgccg cgcgtgatcc gcctgccgaa gggcggcgcc cacggcgcga acgacttcat
     1621 cttcctcacc tccatcctgc acgcgcacgt gggcgagctc ttctccggca tgaacgtgct
     1681 gggctgctac cagttccgcg tcacgcgcaa ctccgacctc ttcgtcgagg aggaggaagt
     1741 gaaggacctg cgcaaggcgc tgcagggaga attgccgcag cggcacttcg gcgatggggt
     1801 gcgcctggaa gtggcggaca acatgtcgga agcgatgaca cgcttcctgc tcacgcagtt
     1861 cgggctggcc ggcgacgacc tctacgcggt cgccgggccg gtgaacctgg tccgcctcat
     1921 gagcatcccc gagcaggtga accggcccga cctcgagtac gcgcccttca cgccggggct
     1981 gcccaagccg ctcgccaagg gccgcgacat cttcgccacc atccgcaagg gcgaccagct
     2041 cctgcaccga ccgttccagt cgttcacgcc ggtgatcgag ttcatccgcg aggcggcgcg
     2101 cgacccgcag gtggtcgcga tcaagcagac cgtctaccgc accggcaccg actcggtgat
     2161 catgcagacc ctcatcgacg cggcgcaggc gggcaaggaa gtcacggtgg tggtcgagct
     2221 gatggcgcgc ttcgacgagg aggccaacat caactggtcg gcgcggctcg aggaggtcgg
     2281 cgcgcacgtg gtctacggcg tggtgggcca caagacgcac gccaagatgg cgctggtggt
     2341 gcgccgcgag gagggcaagc tcgtgcgcta cgcgcacctg ggcacgggca actaccaccc
     2401 gcgcaccgcg cgccactaca ccgacttcga cctgctcacc tgccgcgagg cggtctgcgc
     2461 cgacgtgaac gacgtcttcc agcagctcac cggcctgggc aaggccacca agcacaagca
     2521 cgtgtggcag tcgcccttca acctgcacca gaaggtgatc gaggcgatcg acaacgagac
     2581 gcgcatcgcc aagtccggca agccggcgcg catcgtggcc aagatgaacg cgct
//
LOCUS       DASSYW010001016         3105 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1318915, whole genome shotgun sequence.
ACCESSION   DASSYW010001016 DASSYW010000000
VERSION     DASSYW010001016.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3105)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3105)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3105
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1318915"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1152
                     /locus_tag="VFN38_16055"
     CDS             <1..1152
                     /locus_tag="VFN38_16055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013339.1"
                     /translation="WILSQFTTSGLDDPTKPFWNCVAISQTGDPTGAYYRYAFTTGFN
                     FPDYPKYGIWKDSYVITTREFGPTVEYGIGVYAIDRNKVIVGDPTARVASFFLDGNDP
                     AILPLVGDGLLPADMDGKTKPKQDVPIPLVGTQDDGAGYGATFDAVNDWDLDVHWNAG
                     AEPSASLVLAAQLPTASFDSIFPCAPTSRDCLPQPGIVNPAQYLDILSYRQRPTWRLA
                     WRGFKDYDSMVTNQSVEAAPGVAGIRWYEIRRSSGTYSLYQQGTYEPGDGVHRWMGSI
                     AQDKNGNMALGYSVVNGTSVFPGIRYTGRLAGDALGSMGSVGEGTIVNGSGVQTSTNS
                     RWGDYTSMNVDPVDDCTFWYVNEYYTAAGQASSPAGWQTRIAALRLPGC"
     gene            complement(1244..2185)
                     /locus_tag="VFN38_16060"
     CDS             complement(1244..2185)
                     /locus_tag="VFN38_16060"
                     /inference="COORDINATES: protein motif:HMM:NF017874.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Vps62-related protein"
                     /protein_id="HET9013340.1"
                     /translation="MHRPVRIALLAVVAWLVTIPTAVGATRATPSTATLLARYAPVLV
                     LHPAEQLRPSPVDGFLADSDLQRRTAAGWETIPGPLPNGGADLRLDQRACRASDGVAA
                     TQCYASTEATHGAAPVVYGAALRSGSRIALQYWIWYPSNPYSPTVPPGELWQVHEGDW
                     EAVSVIVDLRGKPLLVGYSQHSKGKRRVWARVPKQGLHPVSYVALGSHANYFTAGVQP
                     FDPQVVDQLLISVIRQNGGQAVDHTGRGLVVRPRVVRLTPTTPSWMTFAGRFGESEYL
                     HVPGGQPADSGGGGPRGPAFHRQWRAPIAEVLSWPTG"
     gene            2440..2512
                     /locus_tag="VFN38_16065"
     tRNA            2440..2512
                     /locus_tag="VFN38_16065"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2473..2475,aa:Lys,seq:ttt)
     gene            complement(2651..3067)
                     /locus_tag="VFN38_16070"
     CDS             complement(2651..3067)
                     /locus_tag="VFN38_16070"
                     /inference="COORDINATES: protein motif:HMM:NF015638.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CbrC family protein"
                     /protein_id="HET9013341.1"
                     /translation="MPSTSDCWRPWDCLPTRQAAPADGSHSAVLGYRTSASEYADYPG
                     GDRFETWQDHEWPMHCGVPATYRGEIGECELTTLANGGDTETFLREHDVDGGDPPITL
                     EQVPPHAPREGETWDSTIHHFRCTSCGRDLLLRDAN"
BASE COUNT          489 a         1072 c         1094 g          450 t
ORIGIN      
        1 tggatcctga gccagttcac cacgagcggc ctcgacgacc cgaccaagcc gttctggaac
       61 tgcgtcgcga tctcgcagac cggcgacccg accggcgcct actaccggta cgcgttcacg
      121 accggcttca acttcccgga ctacccgaag tacgggatct ggaaggactc gtacgtcatc
      181 acgacccgcg agttcggccc gaccgtggag tacgggatcg gcgtctacgc gatcgaccgc
      241 aacaaggtga tcgtcggcga tccgaccgcc cgggttgcgt cgttcttcct cgacggcaac
      301 gaccccgcga tcctgccgct cgtcggcgac gggctgctgc cggcggacat ggacggcaag
      361 acgaagccga agcaggacgt gccgatcccg ctggtcggga cgcaggacga cggagccggc
      421 tacggagcca cgttcgacgc ggtcaacgac tgggacctcg acgtgcactg gaacgccggt
      481 gccgagccga gcgcctcgct ggtgctggcg gcgcagctgc cgacagcatc gttcgactcg
      541 atcttcccgt gcgctccgac gtcacgcgac tgcctcccgc agccagggat cgtgaatccg
      601 gcccagtacc tggacatcct ctcgtaccgg cagcggccga cctggcggct ggcgtggcga
      661 gggttcaagg actacgactc gatggtcacg aaccagtccg tcgaggccgc gcctggagtg
      721 gccgggatcc gctggtacga gatccggcgt tcgagcggga cgtacagcct ctaccagcag
      781 ggtacgtacg agccgggcga cggcgtccat cgctggatgg gctccatcgc ccaggacaag
      841 aacggcaaca tggcgctcgg ctacagcgtg gtcaacggaa ccagcgtgtt cccggggatc
      901 cgctacaccg gccgcctcgc cggtgacgcc ctcggctcga tggggagtgt cggcgagggg
      961 acgatcgtca acggctcggg cgtccagacg tccaccaact cgcgctgggg cgactacacg
     1021 tccatgaacg tcgaccccgt ggacgactgc accttctggt acgtgaacga gtactacacg
     1081 gccgccgggc aggcgtcgtc gcccgccggc tggcagacca ggatcgccgc gctgcggctc
     1141 ccgggctgct gaacgccctc gagggccggc gcggagcatc cgcgccggcc ctcgtgacct
     1201 cgaccgatgc gccgccgtgc tccgggggag gcaacccgcg gccctacccg gtgggccagg
     1261 agagcacctc ggcgatcggc gcgcgccact gacggtggaa cgcgggcccg cgcgggccgc
     1321 caccacccga gtcggccggc tgcccgccgg gaacgtggag gtactcgctc tctccgaagc
     1381 gccccgcgaa cgtcatccac gacggcgtgg tgggcgtgag gcggaccacg cgcggccgca
     1441 cgacgaggcc cctgccggtg tgatcgacgg cctggccgcc gttctgcctg atcaccgaga
     1501 tgagcagttg gtcgaccacc tgcgggtcga agggctgcac gccggcggtg aagtagttcg
     1561 cgtgcgaccc gagcgcgacg tacgacacgg ggtgcagccc ctgcttcggc acccgggccc
     1621 aaactcggcg cttccccttg ctgtgctgcg agtagccgac gaggagcggc ttcccacgca
     1681 ggtcgacgat caccgacacg gcctcccagt cgccctcgtg gacctgccag agctcgccgg
     1741 gcggcaccgt cgggctgtac gggttggacg ggtaccagat ccagtactgg agcgcgatgc
     1801 gagagccgct gcgcagcgcc gcgccgtaca cgaccggcgc tgccccgtgg gtcgcctcgg
     1861 tggaggcgta gcactgcgtc gcggcgacgc cgtcgctcgc gcggcaggcc cgctggtcga
     1921 gccggaggtc ggcgccgccg ttcgggagcg gcccggggat cgtctcccat ccggcggccg
     1981 tgcgccgctg gagatccgag tcggcgagga agccgtcgac cggggagggt cgcagctgct
     2041 cggcagggtg gaggacgagc acgggcgcgt agcgtgcgag cagcgttgcc gtcgagggcg
     2101 ttgcgcgcgt cgcgccgacc gccgtcggga tcgtgacgag ccaggcgacg accgcgagca
     2161 acgcgatccg tacgggacgg tgcaccgcgc ccagtatcca ccgtggcggt ggcccgagcc
     2221 ggcggattgc cgtctctgcg tgcgcaacct gggtcagatc agcgacgaca gggcggccgc
     2281 cgcaactgcc gtccacgcgt cgcgtgcgga agacgaggca cctccgatcg cccaccgacc
     2341 acggccgccg agagctcgcc tacgaatccg ggctcgtgca ggcacggcgt cgtagcgcgc
     2401 aagggccgcc gctcgggccg tccctacact gagtcccgcg ggccgttagc tcagttggta
     2461 gagcagggga cttttaatcc caaggtcgct ggttcgatcc cagcacggcc catgaggatt
     2521 catgcgggtt tgcgggagtc cgggcgccta ctgccgaggc aaggggcgac agatggggca
     2581 acaggcgccg cagcagcgtg catcgatcgc gaacgtcgca tgggtggtga caacgcctga
     2641 acgcgccacc ttagttcgcg tcccggagca atagatcccg accgcagctc gtgcagcgga
     2701 agtggtggat ggtgctgtcc cacgtctcgc cctcgcgggg tgcgtgtgga ggcacctgtt
     2761 cgagggtgat cggcggatcg ccgccgtcca cgtcgtgctc gcgtaagaac gtctctgtat
     2821 cgccgccgtt cgcgagcgtg gtcagctcgc actcgccgat ttcaccgcga taggtcgcgg
     2881 gcacgccgca gtgcatcggc cactcgtggt cctgccatgt ctcaaacctg tcgccgccgg
     2941 gatagtcggc gtattcgctc gccgacgtcc gataccccag tacagcgctg tgcgaaccat
     3001 cagcgggagc ggcctgcctg gttggaaggc aatcccatgg acgccagcaa tccgatgttg
     3061 acggcaagcg acgagcgggt acgcgatccc ccgatgcggg tcgtg
//
LOCUS       DASSYW010001017         2136 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1672298, whole genome shotgun sequence.
ACCESSION   DASSYW010001017 DASSYW010000000
VERSION     DASSYW010001017.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2136)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2136)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2136
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1672298"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(24..1019)
                     /locus_tag="VFN38_16075"
     CDS             complement(24..1019)
                     /locus_tag="VFN38_16075"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HET9013342.1"
                     /translation="MRGTLGRVRAVAAIGLALLCLAACGRRPAPMRIRYADLINVDVR
                     DVPLLMAADDLESKGYTIEKVYLSSSAITTDLLVRGEVDIAMINNQTVWTAIAKGADL
                     RTVGPFTATTGVVGVTDAIRTCQDLDGKSVGVPSSAGLSPLLFRTYLSRHCPGSQPQL
                     VVLPESNARADALLAGRLDAALLPGEEVLKLQRQGIVPLHVMYAYASEFPDVQAEGLH
                     VRREWAAQHVDAIKDFLRAQLLAYRRVIDRPQVLFDESMKRLSIDADTAKAVGGAHLA
                     MHIWDGNGLLTAENVQSTIDFLIKANTLPAGTQTTQVADLSYLNAVLDEIGRVPR"
     gene            complement(1016..>2136)
                     /locus_tag="VFN38_16080"
     CDS             complement(1016..>2136)
                     /locus_tag="VFN38_16080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013343.1"
                     /translation="AVAMLMFDAWNVLASPVVFWQHILPGPGLRFVIQRARFGAPAEA
                     WYSSRGWFDSRSWLKFDLATMYALLWMRAFGARVPLPTIVRPADALVVVRHIRRVIDE
                     RGSCLVSTGTSSGARLAAAAEQAGVRLDGATVRLGGEPVTPAKADLIRRTGARVLPTY
                     GAVETGAIGLGCPHGTASDHMHVASESVALITKPLWIEEAGVSVDAFNLTSLVDASPT
                     VMLNYQIDDYGTIDRRACGCPLHAAGFTTSMHGVHSYSKLLGESVTLLGNEVQRVLED
                     VLPRRFGGTALDYQLLEREDGQGFTRVFLIVSPRIQLHDEQEPARVLLDAFRASGARG
                     DSAGSIWQQAGTLHVLRQEPTPTARGKLLPLHRERPVS"
BASE COUNT          361 a          716 c          728 g          331 t
ORIGIN      
        1 ccagcgcgcc gatcgcatcc gattcatcgc ggcacgcgac cgatctcgtc cagtaccgcg
       61 ttcagatagg acaagtccgc cacctgcgtc gtctgtgtcc cggccgggag cgtgttggcc
      121 ttgatcagga agtcgatggt cgactgaacg ttctcggcgg tcagcaaccc gttgccgtcc
      181 cagatgtgca ttgccaggtg ggcgccgcca acggccttgg ccgtgtcggc atcaatcgat
      241 agccgcttca tggattcgtc gaagaggacc tggggacggt cgatcactcg acgatacgcg
      301 agcaactgcg cgcgcagaaa atccttgatc gcatcgacgt gctgtgcggc ccactcgcgc
      361 cgcacgtgca gcccctcggc ctggacgtct gggaactcgg aggcgtaggc gtacatcacg
      421 tgcaacggca cgatcccttg gcgttggagc ttgagcactt cctcgcccgg cagcagcgcc
      481 gcatccagtc gtccggcgag cagcgcgtcg gcgcgcgcgt tgctttccgg cagcacgacg
      541 agctgcggct ggctgcccgg acaatggcgc gacaggtagg tgcggaacaa caacgggctg
      601 agaccggccg aactcggcac gccgaccgac ttgccgtcga gatcctggca ggtgcggatc
      661 gcgtctgtga cgccgacgac gccagtggtc gcggtgaagg gcccgacagt gcgcaggtcc
      721 gcgcctttgg cgattgccgt ccacaccgtc tggttgttga tcatcgcgat gtccacttca
      781 ccgcgaacga gcaggtcggt ggtgatggcg gagctcgaga ggtagacctt ttcgatggtg
      841 tagcccttgg actcgagatc gtccgccgcc atcagcagcg gcacgtcacg gacgtcgacg
      901 ttgatcagat cggcgtatcg aatgcgcatc ggggccggcc ggcggccgca ggcggcgagg
      961 cagagcaggg cgagaccgat agcggcgacc gcgcgaaccc gaccgagagt gcctctcacg
     1021 agacaggccg ttcgcgatgc agggggagca gtttcccccg cgccgtcggc gtcggttcct
     1081 ggcgcagcac gtgcagcgta cccgcctgtt gccagatgct gcccgcggaa tcgccgcgcg
     1141 cgccggacgc gcgaaatgcg tcgagcagca cgcgggccgg ctcctgctcg tcgtgcagct
     1201 gaatgcgagg gctgacgatc agaaacacgc gcgtgaagcc ctggccgtct tcccgctcca
     1261 gcagctggta gtcgagcgcc gtgcctccga accgtcgcgg caggacatct tcgagcaccc
     1321 gttgcacctc gttgcccagg agcgtcacgc tctcgccgag cagcttgctg tagctgtgga
     1381 cgccgtgcat cgacgtcgtg aagccggcgg cgtgcagcgg acacccgcac gcgcgccggt
     1441 cgatcgtgcc gtaatcgtcg atctggtagt tgagcatgac tgtggggctg gcgtccacga
     1501 gcgacgtcag gttgaaggcg tcaaccgata cgccggcctc ctcgatccag agcggtttag
     1561 tgatgagcgc gaccgactcg ctcgcgacgt gcatgtgatc gctcgccgtg ccgtggggac
     1621 agccgaggcc gatcgctccc gtttcgaccg ccccgtacgt cggcagcacg cgcgcgccgg
     1681 tacgccggat caagtcggcc ttggccggcg tcaccggttc gccgcccagc cgcacggtcg
     1741 cgccgtcgag gcgaacgccg gcctgctcgg cggccgcggc cagccgcgcg ccggaactgg
     1801 tgccggtgga gacgaggcac gatccgcgct cgtcgatcac ccggcggatg tggcggacga
     1861 cgacgagcgc atcggccggc cgcacgatcg tgggcaatgg aacgcgcgcg ccaaaggcgc
     1921 gcatccacaa cagcgcgtac atcgtcgcca gatcgaactt gagccacgag cgcgaatcga
     1981 accacccgcg gctcgaatac caggcttcag cgggcgctcc gaaccgggcc cgctgaatca
     2041 cgaatcgcag cccggggccg ggaagaatgt gctgccagaa cacgaccggc gaggcgagca
     2101 cgttccaggc gtcgaacatc agcatcgcca cggctg
//
LOCUS       DASSYW010001018         2128 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_972670, whole genome shotgun sequence.
ACCESSION   DASSYW010001018 DASSYW010000000
VERSION     DASSYW010001018.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2128)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2128)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2128
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_972670"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..688)
                     /locus_tag="VFN38_16085"
     CDS             complement(<1..688)
                     /locus_tag="VFN38_16085"
                     /inference="COORDINATES: protein motif:HMM:NF012363.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylesterase family protein"
                     /protein_id="HET9013344.1"
                     /translation="MRATLRCLVLAALWALSSFVSHAAGPSTITVSSGQLTGVAGRDA
                     GVRVFKGIPFAAPPVGPRRWQAPEPVAAWTGVRAADRFAPGCVQNVAGARLPWTEEFM
                     HQGAVDEDCLYLNVWMAASGRPRRPVFVYLYGGGFNEGSGSVAIYDGESLARKGLVVV
                     TLNYRVGVFGFLAHPDLAAESRRAASGNYGLLDQVAALRWVQQNIAAFGGDPGNVTIA
                     GQSAGAMSVYL"
     gene            complement(760..1626)
                     /locus_tag="VFN38_16090"
     CDS             complement(760..1626)
                     /locus_tag="VFN38_16090"
                     /inference="COORDINATES: protein motif:HMM:NF013720.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /protein_id="HET9013345.1"
                     /translation="MIATTEYELLRESAGLVDRSARGKLRLTGAEAAEFLQGQVTNDV
                     EALAPGSGCYAALLTHKGKMQADMRVLRGEDWLLIDSEPETLPAIARMVSMYSIGRDV
                     RSEDRTGEDAILSLVGPGARGVLDAEPPAEEHGWVAGEHGLYVTTDAGVDIICPAGDA
                     EGVRAALGAGARGDLGLEGAADGDLIQAVRSLAAGEMYLSPELAASHASAAAAAPVRP
                     APESPRLTERERQVLTLVARGRSNREIAEMLGLSANTIAVHRANLMKTLAVRKTASLV
                     LYAVRHGLVTAD"
     gene            1684..2046
                     /locus_tag="VFN38_16095"
     CDS             1684..2046
                     /locus_tag="VFN38_16095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013346.1"
                     /translation="MALAADFTRMLDSLPPDWTQLKVDLRIFDEDRYIEAASILVQIN
                     AQPYSRHDWHWSLHGAHEFGHAAAPETIRGTLAVLDELGIEGELSKPDVRSGRVEVTQ
                     MWGRPESVRQEFRRRRAQ"
BASE COUNT          318 a          781 c          745 g          284 t
ORIGIN      
        1 gcagatacac cgacatcgcg cccgccgact gccccgcgat cgtcacgttg cccgggtcgc
       61 cgccgaacgc cgcgatgttc tgctgcaccc agcgcagcgc cgccacctga tcgagcaggc
      121 cgtagttgcc cgacgcggcg cgccgcgact ccgccgcgag gtcgggatgc gccaggaatc
      181 cgaacacgcc gacgcggtag ttgagcgtga cgacgaccag ccccttcctg gccagcgact
      241 cgccgtcata gatcgccacc gagccggacc cctcgttgaa cccgccaccg tagagataga
      301 cgaacaccgg ccggcgcggg cgcccgctgg ccgccatcca cacgttgaga tacaggcagt
      361 cctcgtccac cgcgccctgg tgcatgaact cttcggtcca gggcagccgc gcgcccgcga
      421 cgttctgcac gcaccccggc gcgaagcgat cggccgcacg cacgcccgtc catgccgcga
      481 cgggttccgg cgcttgccat cggcgcgggc cgacgggcgg cgcggcgaaa ggaatgccct
      541 tgaacacccg cacgccggca tcgcgccctg cgacgcctgt gagctggccg ctcgagacag
      601 tgatggtgga agggcccgcg gcatgcgaaa cgaaggagct gagggcccag agagcggcga
      661 gaacgagaca gcggagcgtc gcgcgcatcg cgatggagtg tagcctcgtg gccttcagcc
      721 agccaaagcc cagagcccag agcccgaagc cgacaagaat cagtcggccg tgaccaggcc
      781 gtggcgcacg gcatagagga cgagcgacgc tgttttccgc accgcgagcg tcttcatgag
      841 gttggcgcgg tgcaccgcga tcgtgttcgc gctcagcccc agcatctcgg caatctcgcg
      901 gttggaacgc ccgcgtgcca cgagcgtcag cacctgccgt tcgcgctcgg tcagccgcgg
      961 cgactccggc gcgggccgca cgggcgcggc ggcagccgcc gaggcgtgcg aggcggcgag
     1021 ctcggggctg agatacatct cgccggccgc gagacttcgc acggcctgaa tgagatcccc
     1081 gtcggcagct ccttcgagcc cgaggtcgcc gcgcgcgccg gcaccgagcg ccgcgcgcac
     1141 gccctcggcg tcgccggcgg ggcagatgat gtccacgccc gcgtcggtgg tcacgtagag
     1201 cccgtgctcg cccgcgaccc agccgtgctc ctcggcgggc ggctcggcgt cgagcactcc
     1261 gcgcgcgccc ggcccgacca gcgagaggat cgcgtcctcg ccggtgcggt cctcggagcg
     1321 cacgtcgcgg ccgatgctgt acatgctcac catccgcgcg attgccggca gcgtctccgg
     1381 ctcggagtcg attagcagcc agtcctcgcc gcgcagcacg cgcatgtcgg cctgcatctt
     1441 gcccttgtgg gtgagcagcg cggcgtagca gccgctgccc ggcgcgagcg cctcgacgtc
     1501 gttcgtcacc tggccctgga ggaactcggc ggcctccgcg ccggtgaggc gcagcttgcc
     1561 gcgggcggac cggtccacca gcccggcgga ctcgcgcagc agctcgtatt cggtggttgc
     1621 gatcactgct ccgattctaa gagcccggcc tgtcgggcca gggcggggat aaggttccgc
     1681 gcgatggcgc tcgccgcaga cttcacgcgc atgctggact cgcttccgcc cgactggacc
     1741 cagctgaagg tggacctgcg catcttcgac gaggaccgct acatcgaggc ggcgagcatc
     1801 ctcgtgcaga tcaacgccca gccgtactcg cgccacgact ggcactggag ccttcacggc
     1861 gcgcacgagt tcggccacgc cgccgcgccg gagacgatca ggggcacgct cgcggtgctc
     1921 gacgagctcg gcatcgaggg cgagctgtcc aagcccgacg tgcgctccgg ccgcgtggag
     1981 gtcactcaga tgtgggggcg ccccgagtcc gtgcgccagg agttccggcg ccggcgggcg
     2041 cagtagcgcc gtggcccggg tcgcgctgct ctgcgccgac ctgatgttcg gcacgaaggt
     2101 ggaggagcag ctgcgcgcgg cgggccac
//
LOCUS       DASSYW010001019         2157 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_839590, whole genome shotgun sequence.
ACCESSION   DASSYW010001019 DASSYW010000000
VERSION     DASSYW010001019.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2157)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2157)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2157
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_839590"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..507)
                     /locus_tag="VFN38_16100"
     CDS             complement(<1..507)
                     /locus_tag="VFN38_16100"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HET9013347.1"
                     /translation="MTEQLPAAPRTSARQTRWDCLAIVLAAALPLVLLRPLQDVPFGD
                     DWTYAWSVQRLLAGHGLQWLDWSIHYNAVHVLWGALFCLPGGFSFTALRASTWTLAAS
                     GLVALYLLLRQLQVERRDALVGTATLGVNPIFFGLSFTFMTDVPFVALSTWAYLATIV
                     ALTRRSESW"
     gene            complement(558..1451)
                     /locus_tag="VFN38_16105"
     CDS             complement(558..1451)
                     /locus_tag="VFN38_16105"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HET9013348.1"
                     /translation="MAPDGATLSLALAPAAPPAAGLLVRAWRVARRRPPAMAGAVVVA
                     LFVAMAVGAAWIAPFDPVLTDWSQVRKAPSWAHPFGTDDLGRDGLSRVIWGTRISMQA
                     GVCSILLAMATGVPLGFAAAFYRGAVDQAIMRLTDAWLAFPFLILAIGLVTILGPSLV
                     NATIAIGVGATPTYVRLTRGLVLATKEEDYVQGARALGARDLRVMARHILPNITSTIV
                     VQATVQIPTAIIAEAVLSFLGLGVQPPAPSWGTMLNAAQQFLEQAPWMAIWPGAAIFL
                     LALSFNLAGDGLRDILDPRDY"
     gene            complement(1441..>2157)
                     /locus_tag="VFN38_16110"
     CDS             complement(1441..>2157)
                     /locus_tag="VFN38_16110"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HET9013349.1"
                     /translation="TRQSVGRMVAGKLPITLELACLSILVALAIAIPAGVIAAVKRNT
                     VWDLLASGVSLSGVSIPNFWLGIMLILLVSVRLGWLPASGYVSPLEDVLGNLKRMLMP
                     ALVLGTGLAAVLMRQTRNSMIEVLSADYVRTPRAKGLAQPAVVLRHALRNGLIPVVTI
                     LGLQMGALMGGAVVTEQIFVIPGFGRLIVEAVFTRDYPVVQGVVLITASSYVLINLLV
                     DVSYSLLNPRIRIRAGADGS"
BASE COUNT          376 a          737 c          800 g          244 t
ORIGIN      
        1 ccaggattcg ctgcgccgcg tcagtgcgac aatcgtcgcg aggtaagccc aggtggagag
       61 tgcgacgaaa ggcacgtcgg tcatgaacgt gaagctgagc ccgaagaaga tcgggttgac
      121 tccaagcgtc gccgtcccga ccagcgcgtc gcgccgctcc acttggagct ggcgcagcag
      181 cagatacagg gcgacgaggc cgctggccgc aagcgtccag gtcgaggcgc ggagcgccgt
      241 gaacgagaac ccaccgggta ggcagaacag ggcgccccac agcacgtgga cggcgttgta
      301 gtggatcgac cagtccagcc actgcagccc atgcccggcg agcagacgct ggaccgacca
      361 cgcgtaggtc cagtcgtcgc cgaagggaac gtcctgcagc ggacgcaaca ggaccagggg
      421 cagggccgcc gcgagcacaa tcgcgagaca gtcccaccgc gtctgacgtg cggaagtcct
      481 cggcgcggcc ggcagctgct cggtcatggt tggttcgctc gcgcgagcgc gatcgaggac
      541 cagcgtaccc gaccgcgcta gtagtcgcgc gggtcgagga tgtcgcggag gccgtcgccg
      601 gccaggttga acgagagcgc gaggaggaag atcgccgcgc cgggccagat cgccatccac
      661 ggcgcctgct cgaggaactg ctgcgcggcg ttgagcatcg tgccccacga cggcgcgggc
      721 ggctggacgc cgaggccgag gaacgacagc accgcctcgg cgatgatggc ggtcgggatc
      781 tgcacggtgg cctgcacgac gatcgtgctg gtgatgttgg gcaggatgtg gcgcgccatc
      841 acgcggaggt cgcgcgcgcc gagggcgcgg gcgccctgga cgtagtcctc ctccttggtg
      901 gccaggacga gcccgcgggt caggcgcacg taggtcgggg tcgcgccgac gccgatcgcg
      961 atcgtcgcgt tgaccagcga cggcccgagg atcgtcacga ggccgatggc gaggatcagg
     1021 aacgggaacg cgagccacgc gtcggtcagg cgcatgatcg cctggtcgac ggccccgcgg
     1081 tagaacgccg ccgcgaagcc gagcggcacc ccggtggcca tcgcgagcag gatcgagcac
     1141 acgccggcct gcatcgagat gcgcgtgccc cagatcaccc gcgagagccc gtcgcgcccg
     1201 aggtcgtcgg tgccgaacgg atgcgcccac gacggcgcct tgcgcacctg gctccagtcg
     1261 gtgagcaccg ggtcgaacgg cgcgatccac gccgcgccca ccgccatcgc gacgaacagc
     1321 gccacgacga cggcgccggc catcgccggc ggccgccggc gggccacgcg ccacgcgcgg
     1381 acgaggaggc cggcggcggg cggcgccgcg ggcgcgaggg ccagggagag ggtcgcgccg
     1441 tcaggagcca tcggcgccgg cgcggatccg gatgcgcggg ttcaggagcg agtaggacac
     1501 gtcgacgagc aggttgatca gcacgtagga cgacgcggtg atcaggacca cgccctgcac
     1561 caccgggtag tcgcgggtga acaccgcctc cacgatcaac cggccgaatc cggggatcac
     1621 gaagatctgc tcggtcacca cggcgccgcc catgagcgcg cccatctgca ggccgaggat
     1681 cgtcaccacc gggatgagcc cgttccggag cgcgtggcgg agcaccaccg cgggctgggc
     1741 caggcccttg gcccgcgggg tgcggacgta gtccgcgctc agcacctcga tcatgctgtt
     1801 gcgcgtctgc cgcatgagca ccgcggccag cccggtgccg agcacgagcg ccggcatcag
     1861 catgcgcttg aggttgccga gcacgtcctc cagcggcgac acgtaccccg aggcggggag
     1921 ccagcccagg cgcaccgaga ccagcaggat gagcatgatc ccgagccaga agttggggat
     1981 cgacacgccg gaaagggaca cgccgctggc cagcaggtcc cagaccgtgt tgcgcttcac
     2041 cgccgcgatc acgccggcgg ggatcgcgat ggccagcgcc accaggatcg acaggcaggc
     2101 gagctcgagc gtgatcggca gcttgcccgc gaccatgcgg cccacggact gccgcgt
//
LOCUS       DASSYW010001020         2076 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_640940, whole genome shotgun sequence.
ACCESSION   DASSYW010001020 DASSYW010000000
VERSION     DASSYW010001020.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2076)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2076)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2076
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_640940"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..685)
                     /locus_tag="VFN38_16115"
     CDS             complement(<1..685)
                     /locus_tag="VFN38_16115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HET9013350.1"
                     /translation="MSAVPTDLDAYLTKHDARIQRELFDFLRIPSVSARSEHDADTAR
                     AAEWTAQALRDAGLEASVHETAGHPVVIGEWRGAGPSAQTVLVYGHYDVQPAEPLELW
                     TSPPFEPTVRDGKLFARGSVDDKGQLFLHIKALEAHLKARGALPVNVIVLAEGEEEVG
                     SEHLAPFIERNAKRLQADAVVISDSAMFAPGLPSILSSLRGLAYFQIDVQGPAQDLHS
                     GSYGGGVVNP"
     gene            953..1597
                     /locus_tag="VFN38_16120"
     CDS             953..1597
                     /locus_tag="VFN38_16120"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HET9013351.1"
                     /translation="MRSSSLVLAAAALLAAPSLALAQSRGSSPLVSNTVFEATPYVGY
                     MFFGDYLSGPLGTAVTNAPAPVIGAQLGMKLAPNLSLVGNIATASSDIQAGIPILGGV
                     SIAQSRVQMFDAGLQLALPVSSMSGTSFTPFIQAGAGAMRYDITESFATTTSTNFAAN
                     VGLGADVSVGNGVGIRVMAKDYIGQFDMQQATYLDIGTNTTNSYAFSAGVRFSF"
     gene            complement(1628..>2076)
                     /locus_tag="VFN38_16125"
     CDS             complement(1628..>2076)
                     /locus_tag="VFN38_16125"
                     /inference="COORDINATES: protein motif:HMM:NF024854.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HET9013352.1"
                     /translation="HSTAHEALLSVLRTAAVIQRITAQVVEANGITVQQYNVLRILRG
                     AGETGLPTLAIRDRMIEEAAGITRLLDKLESAGYVVRERSTPDRRQVLCQITPAGLSL
                     LAGLDAPVDAMTESAFATLDEAEKKTLVELLGAVRVACRGDAPPAS"
BASE COUNT          312 a          742 c          688 g          334 t
ORIGIN      
        1 ccggattcac gacgccgccg ccatagctcc cggaatgaag atcctgcgcg ggtccctgca
       61 cgtcgatctg gaagtacgcg agcccgcgca gcgacgacag gatgctcggc agccccggcg
      121 cgaacatggc cgagtccgag atgaccactg catccgcctg cagtcgtttc gcgttgcgct
      181 cgatgaacgg cgcgagatgc tcgctcccca cttcctcctc tccctcggcc agcacgatca
      241 cgttcaccgg aagcgcgccg cgcgccttga ggtgcgcctc gagcgccttg atgtgcagga
      301 agagctgacc cttgtcgtcc accgagccgc gggcgaacag cttgccgtcg cgcaccgtag
      361 gctcgaacgg cggcgacgtc cagagctcga gcggctccgc gggctgcacg tcgtagtgcc
      421 cgtacacgag caccgtctgc gccgaggggc ccgcgccgcg ccattcgccg atgaccacgg
      481 gatggccggc cgtctcgtgg accgacgcct cgagccccgc gtcgcgcagc gcctgcgccg
      541 tccactcggc tgcgcgcgcc gtgtcggcat cgtgctccga ccgcgcgctc acgctcggga
      601 tgcgcaggaa gtcgaacagc tcgcgctgga tgcgggcgtc gtgcttcgtg aggtaggcgt
      661 cgagatcggt cggaacggcg ctcatgttcg gcgaagaagg tgctccggtt gtgcgtaggt
      721 cgagtggaac ataacgcggc gctccgttcg gcgaatcgtc ctcgcgggag gtgatccgct
      781 cgtcctccgc cggggacatc acacgatgca ccgggtcgcg tgaggaattc gcaacgctgg
      841 gcgtgagaac gacttacgtg atgcgctcca cgtcgcggtc catcggcacc gcacctgcct
      901 ccccggtgtc cgccaccccc accacccgtg gcgacccttc cggagaatca ccatgcgcag
      961 ttcctcgctc gtcctcgccg ccgccgcgct gctcgccgca ccctcgctcg cgctcgcgca
     1021 gtcgcgcggc tcgtcgcctc tcgtgtccaa caccgtgttc gaggcgacgc cgtacgtcgg
     1081 ctacatgttc ttcggcgact acctcagcgg cccgctcggc accgcggtga cgaacgcccc
     1141 cgcgcccgtg atcggcgcgc agctcgggat gaagctggcc ccgaatctct ccctcgtcgg
     1201 caacatcgcc acggccagca gcgacatcca ggcgggcatc ccgatcctcg gcggcgtatc
     1261 gatcgcacag agccgcgtgc agatgttcga cgccgggctt cagctcgcgc tgcccgtgtc
     1321 gtcgatgtcg gggacgtcct tcaccccgtt catccaggcc ggcgccggcg cgatgcgcta
     1381 cgacatcacc gagtcgttcg cgaccacgac gtccaccaac ttcgccgcga acgtcggact
     1441 gggcgcggac gtctcggtgg ggaacggcgt cgggatccgc gtgatggcca aggactacat
     1501 cggccagttc gacatgcagc aggcgacgta tctcgacatc ggcacgaaca cgacgaacag
     1561 ctacgcgttc agcgccgggg tgcggttttc gttctgagga ttgcccgaag ccgacggcat
     1621 gcgtcggtca tgaggcagga ggcgcgtcgc ctcggcaggc gacgcgcacc gcgccgagca
     1681 gctcgacgag cgtcttcttc tcggcttcgt cgagcgtggc aaacgcggat tcggtcattg
     1741 catcaaccgg cgcgtcgagg ccggcaagga gcgacagccc ggccggcgtg atctggcaga
     1801 gcacctgtcg ccggtcgggc gtggagcgct cgcgcaccac gtagcccgcc gactcgagct
     1861 tgtcgagcag gcgcgtgatc ccggccgcct cctcgatcat gcgatcgcga atggcgagcg
     1921 tcggcagtcc ggtctcgccg gcgccgcgca ggatgcgcag cacgttgtac tgctgcacgg
     1981 tgatgccgtt cgcctcgacg acctgcgccg tgatgcgctg gatcacggct gcggtgcgca
     2041 ggacgctgag caacgcctcg tgcgccgtgg aatgga
//
LOCUS       DASSYW010001021         4621 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1138385, whole genome shotgun sequence.
ACCESSION   DASSYW010001021 DASSYW010000000
VERSION     DASSYW010001021.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4621)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4621)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4621
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1138385"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2072)
                     /locus_tag="VFN38_16130"
     CDS             complement(<1..2072)
                     /locus_tag="VFN38_16130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013353.1"
                     /translation="MSSSRAIERPGPSTLLASVEALGRAHPTARKRLVGPDVNFGREL
                     LVALARRTGGWVGWEATNLRGIAQSLAFVPLAERGVRVADDVTVNALVGQALERALAA
                     GTVGKRFAALAPGLGFRRALLDTLLEARTAGVTADEIRAGAAAGSPAHDVPAVLVEYE
                     RLLREKQLADAPDLFRTAIDAFHREAPFVLDGIVALVPSRPERGLPGQLHDLLRAHGA
                     QLLEVDAVRAERVLHDAVQADFFSAATPSDELREVCRRVVAERLRWDDVEIVATDPDS
                     YGIALDALGQRIGVGATMLQGIPLARTRIGRALDRWLGWLDDGLSADVLRQALEAGEL
                     NLPDGELPSTVLARELRSLRVGWGRARLEAAVTGLAAATRAAGMKRREDESDEEFAAR
                     RASRERAGRALASLLDRLLAVTPAVPERGVATPVRSSCAALARATLGYLALCPQHGEA
                     EAATMAKLRDRLEQLERVESEEVSFANALAALRESLADLRAWPLVTSERKPWSAAGGM
                     PHLTSVSHAGTTGRPRIFVVGFDADRTSGAGRQDPLLPDGARRAIGAGRLATSVERRE
                     ESAASLAGALASLRGRVTLSYATSGTLDGREAGPSPGMLEAWRQATQDPAASYETLRE
                     KLRPPVSAVPARDGAGALAGVEPLDGRDVWLDAMTDGALLLDGTAVVRDAFPVLAAGL
                     DAHAVANG"
     gene            2308..4269
                     /locus_tag="VFN38_16135"
     CDS             2308..4269
                     /locus_tag="VFN38_16135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HET9013354.1"
                     /translation="MRSPFHRLVVAIALTGGIALPTHGQGATPSNAELIERRWATERA
                     LDSLAVIDRKLMLPMRDGTRIQFDVYRPRGVAKVPAIFVRTPYNMNYWDVRLGAPADM
                     TAQLEAVKRGYAYVGANERGHFFSEGNYDILGPPLTDGVDEIQWISSQPWSNGKVGLI
                     GCSSTAEWQMAVAAQAPKGLATIIPQGFGAGVGRVKPYFEQGNWYRGGAVQMLFIDWL
                     EGEQNQVRPMFPPTTSQADLVQAAKLFDLAGRNPPVDWAKAFWTLPMRNMISAHGGPR
                     GIFADSMPGIATGGAMILRQPNDPAWYRGGLFHDDMKINVPGLWFMSWYDVSVGPNLA
                     TFNHVRRTADPAVANQQYAIIAPTLHCSYKRATENTVVGERSMGDARYDYDALTYGWF
                     DVFLKGEKSALLDTLPKVRYFTMGINKWQTSDSWPPKGAESLTYYLSSGGHANTLNGD
                     GVLGTTPPAKDTPDVFTYDPMKPVMSVGGNVCCQANALSGGSLDQRKSEERDDILVYT
                     TEPLTEGIEVSGPITFTTFVSSDRKDTDITVKLVDVYPDGRAYNLDETIQRLRYRNGY
                     DKPVAMMEPGKVYEVTLQPMTTSNFFEAGHRIRIEVSSSNFPRFDRNLNTGGDNVTET
                     QGLVAHNTVHHSRRYPSRLQLTVVRKPRV"
BASE COUNT          690 a         1735 c         1604 g          592 t
ORIGIN      
        1 tcaccgttcg cgacggcgtg cgcgtcgagc cccgccgcaa gcacgggaaa ggcatcgcgc
       61 accaccgcgg ttccgtccag cagcagcgcg ccgtcggtca tcgcgtccag ccagacgtcg
      121 cgtccatcca gcggctccac gccggcgagg gcgcccgcgc cgtcgcgcgc cggcaccgcc
      181 gacacggggg gccggagctt ctcgcgcagc gtctcgtagc tcgcggcggg atcctgtgtc
      241 gcctgccgcc acgcctcgag catcccgggc gacgggcccg cctcgcggcc gtcgagcgtg
      301 ccgctcgtgg cgtacgacag ggtgacccgg ccgcgcagcg acgccagcgc ccccgccagc
      361 gacgccgcgg actcctcgcg ccgctccacc gacgtcgcca ggcgccccgc gccgatcgcc
      421 cgccgcgcgc catcggggag cagcgggtcc tggcgcccgg cgcccgacgt ccggtcggcg
      481 tcgaagccga cgacgaagat ccgcgggcgc cccgtggtgc cggcgtgcga gacggaggtg
      541 aggtgcggca tcccgccggc cgcgctccac ggcttgcgct cgctcgtgac gagcggccac
      601 gcacgaaggt cggcgagcga ctcgcgcagc gcggcgaggg cgttggcgaa gctcacctcc
      661 tcgctctcca cccgctcgag ctgctccagc cggtcgcgca gcttggccat cgtcgccgct
      721 tccgcctcgc cgtgctgggg acagagcgcc aggtagccga gcgtggcgcg ggccagcgcg
      781 gcacaggacg agcgcaccgg cgtggcgacg ccgcgctccg gcaccgcggg ggtgacggcc
      841 agcagccggt cgagcagcga cgcgagcgcc ctgcccgcgc gctcgcgcga tgcgcggcgc
      901 gccgcgaact cctcgtccga ttcgtcctcg cgccgcttca tcccggcagc gcgcgtcgcg
      961 gcggcgaggc ccgtgacggc cgcctccagc cgcgcgcgcc cccagcccac ccgcagcgac
     1021 cgcagctcgc gggcgagcac ggtgctcggc agctccccgt ccggaaggtt cagctcaccc
     1081 gcttccagcg cctggcgcag cacgtcggcc gagaggccgt cgtccagcca gcccagccag
     1141 cggtccagcg cgcggccgat gcgcgtgcgc gcgagaggga tcccctgcag catcgtggcg
     1201 cccacgccga tgcgctggcc cagcgcgtcg agcgcgatgc cgtagctgtc gggatccgtg
     1261 gccacgatct ccacgtcgtc ccaccggagc cgctcggcga cgacgcggcg gcagacctcg
     1321 cgcagctcgt ccgagggagt cgcggcggag aagaagtccg cctgcaccgc atcgtgcagc
     1381 acgcgctccg cgcgcaccgc gtccacctcc agcagctgcg cgccgtgcgc gcgcagcagg
     1441 tcgtgcagct ggccgggcag tccgcgctcc ggacgcgaag gcacgagcgc gacgatcccg
     1501 tcgagcacga agggcgcttc gcggtggaag gcgtcgatgg cggtacggaa caggtcgggc
     1561 gcgtcggcga gctgcttctc gcgcagcagg cgctcgtact ccacgagcac ggcgggcacg
     1621 tcgtgggccg gcgagccggc cgccgcgccg gcgcggatct cgtccgccgt cacccccgcg
     1681 gtgcgcgcct cgagcagggt gtccagcagg gcgcggcgga agccgagccc cggcgccagc
     1741 gcggcgaagc gcttgcccac cgtgcccgcc gcgagcgcgc gctccagcgc ctggcccacc
     1801 agggcgttca ccgtcacgtc gtcggccacg cgcaccccgc gctcggccag cggcacgaag
     1861 gcgagcgact gcgcgatgcc gcgcaggttg gtggcctccc atcccaccca gcctccggtg
     1921 cggcgggcga gggcgacgag cagctcgcgg ccgaagttca cgtcgggccc gacgagccgc
     1981 ttgcgggccg tggggtgcgc gcgaccgagt gcctcgaccg acgcgaggag cgtcgaggga
     2041 ccgggacgtt cgatcgcgcg ggatgacgac atgcggggcg ggcgggggac ggcgtggggg
     2101 gagcgcgctg cggacgatca ggctaccgcc agcctctgac aggcggggaa acaagtgtat
     2161 atcgacgcgg ggcgggcgaa cagaccgcgg cctatccccg gcgaatcatg agaagtatct
     2221 aatgattggc gcctgtcagc tttcccctgc ttgcccgccc gccgcgccgc cgcctgattc
     2281 acggcactca cttcccacgg agccaccatg cgctcgccct tccaccggct ggtcgtcgcc
     2341 atcgcgctga ccggcggcat cgcgctgccc acccatggcc agggagccac gccgtccaac
     2401 gcggagctca tcgagcggcg ctgggccacc gagcgggcgc tggactcgct cgccgtcatc
     2461 gaccgcaagc tgatgctgcc gatgcgcgac ggcacgcgca tccagttcga cgtctatcgc
     2521 ccgcgcgggg tggcgaaggt gccggcgatc ttcgtgcgca cgccctacaa catgaactac
     2581 tgggacgtgc ggctcggcgc acccgccgac atgaccgcgc agctcgaggc ggtgaagcgc
     2641 ggctacgcgt acgtgggcgc gaacgagcgc ggccacttct tctccgaagg gaactacgac
     2701 atcctcggtc ccccgctcac cgacggcgtc gacgagatcc agtggatctc ctcgcagccc
     2761 tggtcgaacg gcaaggtggg gctgatcggc tgctcgtcca ccgcggaatg gcagatggcc
     2821 gtcgcggcgc aggcgccgaa ggggctcgcc accatcatcc cgcaggggtt cggcgccggc
     2881 gtggggcgcg tgaagccgta cttcgagcag ggcaactggt atcgcggcgg cgcggtgcag
     2941 atgctcttca tcgactggct ggaaggggag cagaaccagg tgcggccgat gttcccgccc
     3001 accacctcgc aggccgacct cgtgcaggcg gcgaagctgt tcgacctcgc ggggcgcaac
     3061 ccgccggtgg attgggcgaa ggcgttctgg accctgccca tgcggaacat gatctccgcg
     3121 cacggcgggc cgcgcggcat cttcgccgac tccatgcccg gcatcgccac cggcggcgcg
     3181 atgatcctgc gccagccgaa cgatccggcc tggtatcgcg gcgggctgtt ccacgacgac
     3241 atgaagatca acgtgcccgg cctctggttc atgtcgtggt acgacgtctc ggtgggcccg
     3301 aacctcgcca ccttcaatca cgtgcgacgc accgccgatc ccgcggtcgc gaaccagcag
     3361 tacgccatca tcgcccccac cctccactgc tcgtacaagc gcgccaccga gaacaccgtc
     3421 gtcggcgagc gcagcatggg cgacgcgcgc tacgactacg acgcgctcac ctacgggtgg
     3481 ttcgacgtgt tcctcaaggg agagaagagc gcgctgctcg acaccctgcc gaaggtccgc
     3541 tacttcacga tggggatcaa caagtggcag acgtcggaca gctggccgcc caagggggcg
     3601 gagtcgctca cgtactacct gagcagcggc ggccacgcca acacgctgaa cggcgacggc
     3661 gtgctcggca ccaccccgcc ggcgaaggac acccccgacg tcttcaccta cgatcccatg
     3721 aagccggtga tgtcggtggg gggcaacgtc tgctgccagg cgaacgcgct cagcggcggc
     3781 tcgctcgacc agcgcaagtc ggaggagcgc gacgacatcc tcgtctacac gacggagccg
     3841 ctgacggagg ggatcgaggt gagcggcccg atcaccttca ccaccttcgt ctcgtccgac
     3901 cggaaggaca ccgacatcac ggtgaagctc gtcgacgtgt atcccgacgg gcgcgcctac
     3961 aacctggacg agacgatcca gcgcctgcgc taccgcaacg gctacgacaa gccggtagcg
     4021 atgatggagc cgggcaaggt gtacgaggtc acgctccagc cgatgacgac gagcaacttc
     4081 ttcgaggcgg gccaccgcat ccgcatcgag gtctcgagca gcaacttccc gcgcttcgac
     4141 cgcaacctga acacgggggg cgacaacgtg acggagaccc aggggctggt ggcgcacaac
     4201 acggtgcatc actccaggcg ctatccgtcc cggctccagc tcactgtggt gcgcaagccg
     4261 cgcgtgtagt ggcgatggca caccgggaaa gggggggacg tcgcggctcg cgacgtcccc
     4321 ttccttgcgt tcggcctcgc gcggagctgc cgagcgctgg cgcgcacgct gattcgatga
     4381 cggtgggatg accgcggctg ctacccttgg agcccgacga cgctgcgacc tcccatcccg
     4441 ccatcgatgc gaacccgact cctccacctc ctcgccatcg ccgcgttcat catcccgtgg
     4501 ccgcgtgccc gggcccaggc ctgtctcgcc gcggcgcggc ccaccttcgt cacgacgccg
     4561 cgcggcgact ccctcgagat cgtgagcccg tcgctcctgc ccctcgcgga cggactcctg
     4621 a
//
LOCUS       DASSYW010001022         2764 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1097566, whole genome shotgun sequence.
ACCESSION   DASSYW010001022 DASSYW010000000
VERSION     DASSYW010001022.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2764)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2764)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2764
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1097566"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..137)
                     /locus_tag="VFN38_16140"
     CDS             complement(<1..137)
                     /locus_tag="VFN38_16140"
                     /inference="COORDINATES: protein motif:HMM:NF014592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-adenosylmethionine:tRNA
                     ribosyltransferase-isomerase"
                     /protein_id="HET9013355.1"
                     /translation="MQGLLTADYDFELPAELIAQAPLERRDASRLMVVNRAAGAIEHR
                     T"
     gene            complement(222..1250)
                     /gene="ruvB"
                     /locus_tag="VFN38_16145"
     CDS             complement(222..1250)
                     /gene="ruvB"
                     /locus_tag="VFN38_16145"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HET9013356.1"
                     /translation="MSRAEITTPEVLSEESVVELSLRPQRLEEFIGQQKVKDNLQLAI
                     DAAMARGEPLDHSIFYGPPGLGKTTLAELIAREMRVNIRTTSGPALEKPGDLVGTLTN
                     LRAGDILFIDEIHRLRPVIEEFLYPAMEDYKIDIRLSEGPKAQTITMPIERFTLIGAT
                     TRFGMLTAPMRARFGIEQRLNYYSAEDLELIVRRTGDVLKVDIDVAGAREIARRSRGT
                     PRVANRLLRRVRDYAQVRANGVITEDVARAGLAMLDVDQFGLDDMDARILKAIIEKFD
                     GGPVGVGTISAAIGEDASTLEEVYEPFLVQQGFLQRTPRGRVATPMAYRHFGYTPPAV
                     PTEQVALF"
     gene            1444..2112
                     /locus_tag="VFN38_16150"
     CDS             1444..2112
                     /locus_tag="VFN38_16150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013357.1"
                     /translation="MQRCVAIHANGTSEVLEFRPKVHQELRRLGYRRFVVRTADGRAL
                     SSAVYARTTPSNWQFNDAAKRLWGLTSEVQVFDDQGEPLTDTLTPASGSAAIPSSAET
                     RVAQPTFAEGRDDAEVRKAGVGRETPGASAAQPRTRIDPRQLPELIARANNSLADADP
                     RKITWSMLEDFAGAARAIRLELRAGSLAPAESSERRALADRIETHARALSGYLRPRAE
                     TPGD"
     gene            complement(2117..>2764)
                     /locus_tag="VFN38_16155"
     CDS             complement(2117..>2764)
                     /locus_tag="VFN38_16155"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HET9013358.1"
                     /translation="TGRVFTRAEMTAIAELCVKHDVWVITDEIYEHIRYAGEHHVMAT
                     WPEMRKRTITISGLSKTFSCTGWRLGYVVAPEAQTAAIRKVHDFLTVGAPAPLQAAGA
                     VGMHFDPDYYNHLALDYRSRRTVLCDALTEAGFTFSQPEGAYYVLADFSGLSDMDDTK
                     FARWMCEENGVATVPGSSFYHDRQLGRSLVRFAFCKKYETLKRAAERLATVRASV"
BASE COUNT          410 a          975 c          958 g          421 t
ORIGIN      
        1 aaggtgcggt gctcgatcgc gccggcggcg cggttcacga ccatgagccg gctcgcgtcg
       61 cgccgctcga gcggtgcctg cgcgatcagc tcggcgggga gctcgaagtc gtagtcggcg
      121 gtgaggaggc cttgcatccc accaagctat gtgtcgtcct gagcgcagcg aaggacctgc
      181 acgtgcagat ccttcgcctt cggctcagga cgacaagcca gctagaacag cgccacctgc
      241 tccgtcggca ccgcgggcgg cgtgtaaccg aagtgccggt acgccatcgg cgtcgccacg
      301 cggccgcgcg gcgtgcgctg gaggaagccc tgctgcacga ggaagggctc gtacacctcc
      361 tcgagcgtgc tcgcgtcctc gccgatggcc gcggagatgg tgcccacccc caccggcccg
      421 ccgtcgaact tctcgatgat cgccttgagg atgcgggcgt ccatgtcgtc gaggccgaac
      481 tggtccacgt cgagcatggc gaggccggcg cgcgcgacgt cctcggtgat gaccccgttc
      541 gcccgcacct gggcgtagtc gcgcacgcgg cgcagcaggc ggttggccac gcgcggcgtg
      601 ccccgcgagc ggcgcgcgat ctcgcgtgcc cccgccacgt cgatgtccac cttcagcacg
      661 tcgccggtgc ggcggacgat cagctcgagg tcctcggccg agtagtagtt gagccgctgc
      721 tcgatcccga agcgcgcccg catcggggcc gtcagcatgc cgaaccgcgt cgtggcgccg
      781 atgagcgtga accgctcgat cggcatcgtg atcgtctgcg ccttgggtcc ctcgctcagc
      841 cggatgtcga tcttgtagtc ctccatcgcc ggatagagga actcctcgat caccggacgc
      901 aggcggtgga tctcgtcgat gaacaggatg tcgccggcgc gcaggttcgt gagggtgccc
      961 accaggtcgc ccggcttctc gagcgcgggc cccgaggtcg tgcggatgtt gacccgcatc
     1021 tcgcgcgcga tgagctccgc gagcgtggtc tttcccaggc ccggcggccc gtagaagatc
     1081 gagtggtcga gcggctcgcc gcgcgccatc gccgcgtcga tcgcgagctg aaggttgtcc
     1141 ttcaccttct gctggccgat gaactcctcg agccgctgcg ggcgcagcga cagctcgacg
     1201 acggattcct cggagaggac ttcgggggtg gtgatttccg cgcgcgacat tgggctacac
     1261 agtacctgca tctcgggaaa acggccaagc gatccgccca accggcaata tataccgaag
     1321 agacaccgaa atccacgcgc atgttcgcgc ttgagtgtgt gcgggagatc acacagattg
     1381 ctgaccccgg ctcctggccg gacccagtgt ccccgtctct tctccccgtt cccgccgcac
     1441 gacatgcagc gctgcgtcgc gatccacgcc aacggcacca gtgaggtgct cgagttccgg
     1501 cccaaggtgc atcaggagct gcgacgcctc ggctatcgcc ggttcgtcgt gcgcaccgcg
     1561 gatggccgcg cgctctcctc ggcggtgtac gcgcgcacga ccccctccaa ctggcagttc
     1621 aacgatgccg cgaagcggct ctgggggctc acgagcgaag tgcaggtgtt cgacgaccag
     1681 ggcgagccgc tcaccgacac gctcaccccg gcgagcggtt ccgcggcgat cccgtcgagc
     1741 gccgagacgc gggtcgccca gcccaccttc gccgaggggc gggacgacgc cgaggtccgg
     1801 aaggcggggg tggggcgcga gaccccgggc gcgtccgccg cgcagcccag gacgcgcatc
     1861 gacccgcggc agctgccgga gctgatcgcg cgcgccaaca attccctggc cgacgccgat
     1921 ccccgcaaga tcacgtggag catgctggag gacttcgcgg gcgccgcgcg cgcgatccgg
     1981 ctcgagctcc gggcgggctc gctggcgccc gccgagtcca gcgagcgccg ggccctggcc
     2041 gatcgcatcg agacccacgc ccgcgcgctg agcggctacc tgcgcccgcg cgccgagacg
     2101 ccgggcgact agcggtctac acggacgccc gcaccgtcgc cagccgctcc gccgcgcgct
     2161 tgagcgtctc gtacttcttg cagaaggcga agcgcaccag ggagcgcccg agctgccggt
     2221 cgtggtagaa gctggagccg ggtacggtgg cgacgccgtt ctcctcgcac atccaccgcg
     2281 cgaacttcgt gtcgtccatg tcgctgagcc cggagaagtc ggccaggacg tagtacgccc
     2341 cttcgggctg cgagaaggtg aagcccgcct cggtgagcgc gtcgcacagc acggtgcggc
     2401 gcgaccggta gtcgagcgcg aggtggttgt agtagtccgg gtcgaagtgc atccccaccg
     2461 cgcccgccgc ctgcaggggc gccggcgcgc cgacggtgag gaagtcgtgc accttccgga
     2521 tcgccgccgt ctgcgcctcg ggcgcgacga cgtagccgag ccgccagccg gtgcagctga
     2581 aggtcttgga gagcccggag atggtgatcg tgcgcttccg catctcgggc cacgtcgcca
     2641 tcacgtggtg ctcgccggca tagcggatgt gctcgtagat ctcgtcggtg atcacccaca
     2701 cgtcgtgctt cacgcacagc tcggcgatcg ccgtcatctc ggcgcgggtg aacacgcggc
     2761 cggt
//
LOCUS       DASSYW010001023         3939 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_876437, whole genome shotgun sequence.
ACCESSION   DASSYW010001023 DASSYW010000000
VERSION     DASSYW010001023.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3939)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3939)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3939
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_876437"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..854
                     /locus_tag="VFN38_16160"
     CDS             <1..854
                     /locus_tag="VFN38_16160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HET9013359.1"
                     /translation="RIAIPYLFAAAGGTLSERAGLIALTLEGYMLGGAFTAVVASHYS
                     GSPWIGVLAAVGGGAALALLYAVCTIRFRADQVVVGIAINLLAIGLTRFFLRLLFDSS
                     SNSPRVSGFQVEGSGTGFGALVQNPLVWLGVLGTALVAWALYRTPFGLRVRAVGEHPA
                     AAASVGVPVARVRYLAVALSGMLAGLGGAYLALDQHQFTDGMTAGRGFIALAAIIFGR
                     WDPRRAALACLLFAAAETLQIRLQGAQALPSQFVEMIPYVLTIVALAGVVGRAVPPAA
                     LGRTTTE"
     gene            932..2230
                     /locus_tag="VFN38_16165"
     CDS             932..2230
                     /locus_tag="VFN38_16165"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HET9013360.1"
                     /translation="MSRRLAPKRPHDSRKLWILMITAFIDMVGLLMVIPILPFYAKEL
                     GAGGLIVGMLVSSFAVAQLLSAPMWGRFSDAYGRRPALLVGLAASAIAYVIFGFAHSL
                     ALLFLSRLVQGAGGGTVSVIQAYVADATEPEDRAKALGWLSAATNAGVAIGPVLGSLS
                     SQWGREAPGLFAAALCVVNMAFAWRFLTESRDMTEAAEAKANPAPRARSRDAIVHVVT
                     HSAEPASRLIWIYAIAMGAFQGVTSMLALFLAVRFQVTAKTIGFFFAYTGVISVLTRA
                     LVLGRMVDRFGEARLSRFGSTLLAVGIASLAFIRPLADPAGVAARLGGVLPPAAVAFL
                     PYLPLALAVALLPLGTAFTFPCVTALLSRVISSRERGLYMGVQQTFGGLARVCFPILF
                     GWLFDRYVPLPFLIAASLVVFTIWLGMGMEAYTKPAAAPA"
     gene            complement(2259..2873)
                     /locus_tag="VFN38_16170"
     CDS             complement(2259..2873)
                     /locus_tag="VFN38_16170"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ANTAR domain-containing protein"
                     /protein_id="HET9013361.1"
                     /translation="MPDSGSIRILIAEDDDNARALLVELLNTMGHVVVAEVTGGREAI
                     ERAIDVVPDVVLLDVHMPDGSGIEAAEQIAAQVPGVAVVLFSGDESIVLSEREIAATA
                     AIAFLPKPTPPRVLDSTLRLAVSRAREFAGAKKDAQAARGALENRKTIERAKGILMRR
                     TGSSEQEAYRILQRTSQDRSVPMVEIARAVLASEPGLAENSKEG"
     gene            complement(2923..>3939)
                     /locus_tag="VFN38_16175"
     CDS             complement(2923..>3939)
                     /locus_tag="VFN38_16175"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HET9013362.1"
                     /translation="LNPIMAAAYLLEMNAENPAAVRDYAARIARAAETGAATAARVGR
                     FIRQEPLLGSREGAVDLSVMVEEVVAMTRPLWQERAKGGVVQLDESLTEGALIKGIAG
                     ELREALLNLVQNALDAMPGGGTLRIRTTKNEREISVAVSDTGTGMSAEVRERAFEPFF
                     TTKGVNGTGLGLAEVYGIARRHRGRAEIESELGAGTTVRLVFPAGTDTVRAEAPPPPK
                     RARPARRILLVEDHTDSREFMQALLETDGHKVESVKTVGEARARLDQEAGAYYEVLVT
                     DIGLPDGSGWDLVAFARERRPALRIGVVTGWEPRNEQDPACDFTLRKPVGAEDLLEMI
                     AGDG"
BASE COUNT          441 a         1445 c         1399 g          654 t
ORIGIN      
        1 tgcgcatcgc catcccttac ctgttcgccg cggccggcgg cacgctgagc gagcgcgcgg
       61 ggctcatcgc gctcacgctc gagggctaca tgctgggcgg cgccttcacg gccgtggtcg
      121 cgagccacta ttccggctcg ccctggatcg gcgtgctcgc cgccgtgggc gggggtgccg
      181 cgctcgccct gctgtacgcc gtgtgcacga tccgcttccg cgccgaccag gtcgtcgtgg
      241 gcatcgcgat caacctgctg gccatcgggc tcacccggtt cttcctgcgc ctgctgttcg
      301 acagctcgtc caactcgccg cgggtctcgg gattccaggt ggagggaagc ggcacgggct
      361 tcggcgcgct ggtgcagaac ccgctcgtct ggctcggcgt gctcggcacc gcgctggtgg
      421 cgtgggcgct gtaccgcacg ccgttcgggt tgcgggtgcg cgcggtgggc gagcatcccg
      481 ccgccgccgc ctcggtgggg gtgccggtgg cgcgggtgcg ctatctcgcc gtcgcgctca
      541 gcgggatgct ggccggcctc ggcggggcct acctcgcgct cgaccagcat cagttcaccg
      601 acgggatgac ggcgggacgc ggcttcatcg cgctggcggc gatcatcttc ggacggtggg
      661 atccccgccg cgcggcgctg gcctgcctgc tgttcgccgc ggcggagacg ctgcagatcc
      721 ggctccaggg ggcgcaggcg ctgccgtcgc agttcgtgga gatgattccc tacgtgctga
      781 cgatcgtggc gctggcgggc gtcgtcggcc gcgccgtgcc gccggcggcg ctgggtcgga
      841 cgaccacgga gtgacggtga acggtggatg gtgaacggtg cgcggtggac ggtggacgat
      901 ggtcggtgca gcgcgccgtg ggcggtgagc cgtgagccgt aggctggccc cgaagcggcc
      961 gcacgacagc cggaagctct ggatcctgat gatcacggcc ttcatcgaca tggtggggct
     1021 gctgatggtg atcccgatcc tccccttcta cgcgaaggag ctgggggcgg ggggcctgat
     1081 cgtggggatg ctcgtcagct cgttcgccgt cgcgcagctc ctcagcgcgc ccatgtgggg
     1141 gcggttctcc gacgcgtacg gccgccggcc ggcgctgctc gtcggcctcg ccgcgtcggc
     1201 catcgcgtac gtgatcttcg gcttcgccca ttcgctggcg ctgctgttcc tgtcgcggct
     1261 cgtgcagggg gcggggggcg gcacggtgag cgtcatccag gcctacgtcg ccgatgccac
     1321 cgagccggag gaccgcgcca aggcgctcgg ctggctctcg gccgccacca acgcgggggt
     1381 cgccatcggc ccggtgctcg gctcgctgtc cagccagtgg gggcgcgagg cgcccggcct
     1441 gttcgccgcg gcgctgtgcg tggtgaacat ggccttcgcc tggcgcttcc tcaccgaatc
     1501 gcgcgacatg accgaagcgg cggaggccaa ggcgaacccc gcgccgcgcg cgcgctcgcg
     1561 cgacgcgatc gtgcacgtcg tcacccactc cgcggagccc gcgtcgcggc tgatctggat
     1621 ctacgccatc gcgatggggg ccttccaggg ggtgacgtcg atgctggcgc tctttctcgc
     1681 cgtgcgcttc caggtcaccg cgaagacgat cggcttcttc ttcgcctaca ccggcgtgat
     1741 cagcgtgctg acgcgcgcgc tcgtcctcgg ccgcatggtg gaccgcttcg gcgaggcgcg
     1801 cctgtcgcgc ttcggctcca cgctgctggc tgtcggcatc gcgtcgctcg ccttcatccg
     1861 gcccctcgcc gacccggcgg gggtggcggc gcggctcggc ggggtgctgc cacccgccgc
     1921 ggtggcgttc ctcccgtacc tgccgctcgc gctggccgtc gcgctgctgc cgctgggcac
     1981 ggcgttcacc ttcccctgcg tcacggcgct gctgtcgcgc gtcatctcga gccgcgagcg
     2041 cgggctgtac atgggcgtgc agcagacctt cggcgggctg gcgcgggtgt gcttcccgat
     2101 cctgttcggc tggctgttcg accgctacgt gccgctgccc ttcctcatcg ccgcatcgct
     2161 ggtggtattc acgatctggc tggggatggg gatggaggcg tacaccaagc ccgctgccgc
     2221 gcccgcgtga cggccagcgc gcgcgctgcg ggacgcggtc agccttcctt gctgttctcc
     2281 gccagtcccg gctcgctcgc cagcaccgcg cgcgcgatct ccaccatcgg caccgagcgg
     2341 tcctgcgacg tccgctgcag gatgcggtag gcctcctgct ccgacgagcc ggtgcggcgc
     2401 atcaggatcc ccttggcgcg ctcgatcgtc ttgcggttct ccagcgcgcc gcgcgcggcc
     2461 tgggcgtcct tcttggcccc ggcgaactcg cgcgcccgcg acacggcgag gcggagggtg
     2521 gagtccagca cccgcggcgg cgtcggcttg gggaggaagg cgatcgccgc cgtggccgcg
     2581 atctcgcgct cggacagcac gatcgactcg tcgccgctga agagcaccac cgccacgccc
     2641 ggcacctgcg ccgcgatctg ctcggccgcc tcgatccccg agccgtcggg catgtgcacg
     2701 tcgagcagca cgacgtcggg cacgacgtcg atcgcccgct cgatcgcctc gcggcctccg
     2761 gtgacctccg cgacgaccac atggcccatc gtgttcagaa gctcgacgag cagcgctctc
     2821 gcgttgtcgt cgtcttcggc aatgagaatg cggatggatc ccgagtcagg catcgcggcg
     2881 ttcaggaagt gatgaggagt cccgcgatga atttgggcgt gctcacccat ctcccgcaat
     2941 catttcgagc aaatcttccg ctccgacggg cttccgcagc gtgaaatcgc aggcgggatc
     3001 ctgctcgttg cgcggttccc acccggtcac cacgccgatg cgcagcgccg gccgacgctc
     3061 gcgcgcgaag gccacgaggt cccagccgct gccgtccggc aggccgatgt ccgtgacgag
     3121 gacctcgtag taggcgcccg cctcctggtc gaggcgcgcg cgcgcctcgc ccaccgtctt
     3181 caccgactcc accttgtggc cgtccgtctc cagcagcgcc tgcatgaact cgcggctgtc
     3241 cgtatggtcc tccaccagga ggatccgccg ggccggacgc gcccgcttgg gcggcggtgg
     3301 tgcctccgct cgcaccgtgt cggtgccggc cgggaagacg aggcggaccg tcgtccccgc
     3361 gcccagctcc gactcgatct ccgcccggcc gcgatgccgc cgggcgatgc cgtacacctc
     3421 ggccagcccg agccccgtgc cgttgacccc cttcgtcgtg aagaagggct cgaaggcgcg
     3481 ctcgcgcacc tcggccgaca tgcccgtgcc ggtatcgctc accgccacgc tgatctcccg
     3541 ctcgttcttc gtcgtccgga tgcggagggt gccgcccccc ggcatggcgt ccagggcgtt
     3601 ctggaccagg ttcagcagcg cctcgcgcag ctcgccggcg atccccttga tcagcgcgcc
     3661 ctcggtgagc gactcgtcga gctggaccac cccgcccttg gcgcgctcct gccagagggg
     3721 gcgcgtcatg gcgacgacct cctcgaccat caccgagaga tccacggcgc cctcgcggga
     3781 gccgagaagg ggctcctgcc ggatgaaccg gccgacccgg gcggcggtcg cggcccccgt
     3841 ctccgccgcg cgggcgatgc gcgccgcgta gtcccgcacg gccgccgggt tctcggcgtt
     3901 catctcgagc aggtacgccg ccgccatgat cgggttgag
//
LOCUS       DASSYW010001024         2282 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_599871, whole genome shotgun sequence.
ACCESSION   DASSYW010001024 DASSYW010000000
VERSION     DASSYW010001024.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2282)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2282)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2282
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_599871"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            148..642
                     /locus_tag="VFN38_16180"
     CDS             148..642
                     /locus_tag="VFN38_16180"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HET9013363.1"
                     /translation="MRFRDATSDDVAAIAGLHNAAAGALTARHGPGPWSALVTERGAM
                     LALRHSRIRVGRYGKRIVTVLRLATKKPWAIDVSYFTPVKRPLYLTGMSVSVAHQGQG
                     LGRLALEDAAAVTRGWPADAIRLDAFDADAGAGRFYTRCGFTERGRVVYKGDPLAYFE
                     RLLL"
     gene            1163..>2282
                     /locus_tag="VFN38_16185"
     CDS             1163..>2282
                     /locus_tag="VFN38_16185"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HET9013364.1"
                     /translation="MVNPYTAVASRATLRTIGVLIAGWLSVPAMLAAQHEPSHQDSTA
                     AATLAPITVIGARAPSVAPPVQTIEVPAEQLHRAPASGPYDLVRRTAGIEVHEQGQGP
                     GFASDAVIRGFTSDHSSDVLLVVDGVPINLPLHGHVEGYADWSLLTPASLASIRVIHG
                     PSSPLYGDFAFGGVVEAMTADDADAGVATIRGSSFGDFGGWARTGRRGSTSGGLLALD
                     GQRQQGWRDNSDYWLGNAVAHGWRSAGAGRMTGGVMLYGSSWDSPGFVSVDRYNADDL
                     DAATDPTDGGSAGRLILHGHYHVPTGDNTSFESALWTQGVRSRVFLNIPHDGLVAQTE
                     EEDRRGAVGGDARLVWQPGTSEITAGVSGRADWVGYDLY"
BASE COUNT          316 a          814 c          780 g          372 t
ORIGIN      
        1 cttatcgacc gaagtgttcg cgcaggacgg cgagtcgttt gtcaccgacc tgatctgtcc
       61 gactcccggc tcgagggagc tgcgcctgcg cgcggcgggc aacgagccac gcgtcgcccg
      121 aatcatgctc gcacggctca cggggccgtg aggttccgcg acgccacatc cgacgacgtc
      181 gcggcgatcg ccggcctgca caacgcggca gccggtgcgc tgacggcgcg gcacgggccg
      241 ggtccatggt ccgcgctggt aacggagcgc ggggccatgc tcgccttgcg ccactcgcgc
      301 atccgggtgg gacggtacgg gaagcggatt gtgacggtgc tgcggctggc gacgaagaag
      361 ccttgggcca tcgatgtctc gtacttcaca cccgtcaagc gtccgctgta cctgaccggc
      421 atgagcgttt ccgtggcgca ccagggccag gggttgggcc gcctcgcgct cgaggacgcg
      481 gccgccgtga cacggggctg gccggcggac gccattcgcc tggacgcgtt cgacgcggat
      541 gccggggcag gccggttcta cacccggtgc ggcttcaccg agcggggaag ggtcgtctac
      601 aagggcgacc cgctggccta cttcgagcgc ctgctgctct agccgggtgg cggccttgcg
      661 tgccaaccgt cgccacacca gtgtttgagt gatgcggcag cccaccccgc gcctctcccg
      721 cccgtggcta cgcgccggcc tggcgctctt gctcgccgtg gccttcggcc ttcgcgtcac
      781 cgtgccacca gccgtgctgg gatgcatgag cgacggtgcg agcggcgcct ccgaacacgc
      841 gggtcatcac ggccacaagg gcggcacccc tgcatccgcg ccgccgctgt gtgtgtgcat
      901 cgcccacggc tccgggatga gcgtcgtcat tgaacccgca gggttcctga gggccgtggc
      961 gtcgccattc gggctccatc tgtcctcgtt ccgggacggc ttgcgcccgg ttaccgccga
     1021 ttcacacctc ctcccgttct ccatcggccc tcccgtccga ctcgcctgac cccgtcgtcc
     1081 atcgtcacag agtcgatgcg aatcgtgacc gaccgccggc agcacgccgt cgtgccggtc
     1141 cgtcctggag cgctgagagg caatggtcaa cccctacacc gcggtggcgt cacgagcgac
     1201 gctccgcacc attggagtcc tgatcgccgg ctggctctcc gtgcccgcga tgctcgccgc
     1261 ccagcacgag ccgtcccacc aggacagcac cgcggccgcg acgctggccc cgatcaccgt
     1321 catcggcgcc agagcgccat cggtcgcgcc gcccgtccag acgatcgagg ttcccgccga
     1381 gcagcttcac cgggctcctg ccagcggacc gtatgacctg gttcgccgca cggccgggat
     1441 cgaagtccat gagcagggcc agggaccggg cttcgcttcc gacgccgtca tccgtgggtt
     1501 cacctccgac cattcgtccg atgtgctgct ggtggtggac ggtgtgccga tcaaccttcc
     1561 gctgcacggc catgtcgagg gatacgccga ttggagcctg ctgactcctg catccctcgc
     1621 ttcaatccgg gtgattcacg ggccgtccag cccactctat ggagatttcg ccttcggcgg
     1681 cgtcgtggag gccatgacgg cggacgacgc cgacgccggc gtcgccacca ttcgcggctc
     1741 gagcttcggc gacttcgggg gatgggcgcg caccggccgc cgaggctcga cctcgggtgg
     1801 ccttctcgcg ctggacgggc agcggcagca gggctggcgc gacaactcgg actactggct
     1861 ggggaacgcg gtcgcgcatg ggtggcggag cgccggcgca ggacgcatga ccggtggggt
     1921 gatgctgtac ggctcgagct gggattcccc cggtttcgtc tccgtggacc gctacaacgc
     1981 cgacgacctt gatgccgcga ctgatcccac cgatggcggc tccgcggggc gcctgatcct
     2041 gcacggccac taccacgtgc ccaccggtga caacaccagc ttcgagtcgg cgctatggac
     2101 ccagggcgtg cgctcgcggg tcttcctcaa cattccccac gacggcctcg ttgcccagac
     2161 cgaggaggaa gaccggcgcg gggcggtcgg cggggatgct cgactggtct ggcaacccgg
     2221 gaccagcgag atcacagcgg gcgtgagcgg ccgcgccgat tgggtcgggt acgatctgta
     2281 cg
//
LOCUS       DASSYW010001025         3123 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1038297, whole genome shotgun sequence.
ACCESSION   DASSYW010001025 DASSYW010000000
VERSION     DASSYW010001025.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3123)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3123)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3123
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1038297"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(92..715)
                     /locus_tag="VFN38_16190"
     CDS             complement(92..715)
                     /locus_tag="VFN38_16190"
                     /inference="COORDINATES: protein motif:HMM:NF020893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VTT domain-containing protein"
                     /protein_id="HET9013365.1"
                     /translation="MLERLWKYTALGATSIVFEEANPILGGIAVRHGRAGLFGVVVAV
                     AIGTWIASIALYFVGRWRIDWVRARWPDKRRLLTGALTIVRRHPWRSSLAIRFAYGLR
                     LPLPVACGAARLPFSLYLLASGISCWSWALAFGYLGYAAGGAALRLLDFTHRLDVRLA
                     LLVLILSAVLFFMMRRRMIAERTARVLAGEPVSFTTTEERMALRRES"
     gene            883..1251
                     /locus_tag="VFN38_16195"
     CDS             883..1251
                     /locus_tag="VFN38_16195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013366.1"
                     /translation="MDRVRYIEHKGRKIVLLDFAGITDPTQGLAAVAEATKFIGALPV
                     GGDTMTLTDVTDTRYDRKIVEAFKEMTAKNKPIVRAAAIVSNSSLHRAAISMIALFSR
                     RKLEVFDSRPQALEWLASQK"
     gene            1459..1773
                     /locus_tag="VFN38_16200"
     CDS             1459..1773
                     /locus_tag="VFN38_16200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013367.1"
                     /translation="MFDANYFRTLLTRDIEAAGGSPIVELLLVGGHVHRVRSVVAVDD
                     ARATFEAYQMKGDLTHQRPRFGQAADGPHETFRVVVSLENIVAVVFDPSPAQPKHRPG
                     FG"
     gene            1785..2123
                     /locus_tag="VFN38_16205"
     CDS             1785..2123
                     /locus_tag="VFN38_16205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013368.1"
                     /translation="MADPGRVVVVAAGFALWVGGRCVAAARWADVNRLRAYHRDAPPS
                     DALHLGVDLVDGTVMELHEAAPGFDAFLDRAAATLPGLLPYGDWHHALASAPAGGDGL
                     VLFERKTRRY"
     gene            2314..2670
                     /locus_tag="VFN38_16210"
     CDS             2314..2670
                     /locus_tag="VFN38_16210"
                     /inference="COORDINATES: protein motif:HMM:NF024297.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HET9013369.1"
                     /translation="MEEPRVRTVVERYLHGLKFNDVESLRSAFAPDAKLVWVKRDGTV
                     GQLSQADWYRSFAANAGKEEEGDLSIASVDLTGDVASVKVVETYPKEVYVDYLNLVRA
                     GGEWRIVNKVYTRWSK"
     gene            2717..>3123
                     /locus_tag="VFN38_16215"
     CDS             2717..>3123
                     /locus_tag="VFN38_16215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013370.1"
                     /translation="MRTLSIRRSCSLLALCAGLARAQAPSVVERDFVARDVRFASGDS
                     LPTLTLHYRTLGQPRRDAAGVVRNAVLILHGTTGSGAQFLSRPFAGELYGPGQPLDTS
                     LYFVVLPDGIGHGQSSRPSQGLHARFPRYTYDD"
BASE COUNT          492 a         1126 c         1056 g          449 t
ORIGIN      
        1 cacgtcctcc ggcttgccat cggcaacgtg aggacagagg agcgccacgt ggcgcgcgcg
       61 tgggagctgc tgcgggacgc ggcggcgagc ctcagctctc acgccgcagc gccatccgct
      121 cctcggtcgt cgtgaacgag accggctctc ccgccagcac ccgcgccgtc cgctcggcga
      181 tcatccggcg gcgcatcatg aagaacagga ccgccgagag gatgagcacc agcagcgcga
      241 gccgtacgtc gagccggtgg gtgaagtcga gcagccgcag tgccgcgccg ccggcggcgt
      301 agccgagata gccgaacgcc agcgcccagc tccagcagct gatcccgctc gcgagcaggt
      361 acagcgagaa gggaagccgc gccgcaccgc aggcgacggg gagcggaagg cgcagcccgt
      421 acgcgaagcg gatggccagc gaggagcgcc acgggtgccg acgcacgatc gtgagcgcgc
      481 cggtgagcag tcgccgcttg tcgggccagc gggcgcgcac ccagtcgatg cgccaacgcc
      541 ccacgaagta gagcgcgatg gacgcgatcc aggtgccgat ggcgacggcg accacgaccc
      601 cgaacaggcc ggcgcgcccg tggcgcacgg cgatgccgcc aaggatcggg ttcgcctcct
      661 cgaacacgat gctcgtcgcc ccgagcgccg tatatttcca gaggcgctcg agcaacggaa
      721 catcctgcaa gtggcggatg accggtgcgg ccgcctgaag tgcgagcgtg agaatacgac
      781 cccctcctcc cattaccgat gcggcgagac catcttcctc gccgtctata tatcgtcgcc
      841 ggcccccggt gacgccaccg atcacccatt cccgctgccg caatggatcg cgtgcgttac
      901 atcgaacaca agggaaggaa gatcgtcctc ctcgacttcg ccgggatcac cgaccccaca
      961 caaggactcg cagccgtcgc cgaggccacg aagttcatcg gggcactgcc ggtgggcggc
     1021 gatacgatga cgctcaccga cgtcaccgac acccgctacg accggaagat cgtggaggcg
     1081 ttcaaggaga tgacggcgaa gaacaagccg atcgtgaggg ccgccgccat cgtcagcaac
     1141 tcgtcgctcc accgcgccgc gatcagcatg atcgccctgt tctcgcggcg gaagctcgag
     1201 gtcttcgact cgcgccccca ggcgctggag tggctcgcct cccagaagtg aggccgcccc
     1261 ggcccgcgcc ggcgctatct tgtcagggcg cccgcggccc attgccgtcg aagagcagca
     1321 ggacggcggc gagcgcgagg aacagcagga cgagacaccc gcaacccggg cttctcggga
     1381 tccatgtcgg gagacgcggc ataccggcaa gctagccgcc ccgcgccgtc cacgatccac
     1441 tccagtcggg accctcccat gttcgacgcg aactacttcc gcaccctcct gacgcgcgac
     1501 atcgaagcgg cgggcggcag ccctatcgtc gagctcctcc tggtgggcgg acacgtgcat
     1561 cgggtccgca gcgtggtggc ggtggacgac gcgcgcgcga ccttcgaggc gtaccagatg
     1621 aagggcgacc tcacccatca gcggcctcgc ttcggccagg ccgccgacgg cccgcacgag
     1681 accttccggg tggtcgtctc gctggagaac atcgtcgccg tggtcttcga cccgtcgccc
     1741 gcgcagccga agcatcgccc gggattcggc tgacggaggc gaggatggcc gatcctggcc
     1801 gagtcgtggt cgtggcggcg ggattcgccc tctgggtggg cgggcggtgt gtggccgctg
     1861 cccggtgggc cgacgtgaac cggctccgcg cctatcatcg cgatgccccg ccgtccgacg
     1921 cgctgcacct gggcgtcgac ctcgtggacg gcaccgtcat ggagctccac gaagcggccc
     1981 ccgggttcga cgccttcctc gatcgcgcgg ccgcgacgtt gcccggattg ctgccgtacg
     2041 gtgactggca tcacgcgctc gcctccgcgc ccgccggcgg cgacggcctc gtgctgttcg
     2101 agcgaaagac gcggcgttac tagagcggac gctcgggagt ctccggtatc cgcaggtgct
     2161 gctcgcgcct cgcatcccgc cacccgacgc acccgtccct cgctcatgcc gatccgtcgt
     2221 ctcgtgctgc tcgccctgtg cggcacgtca ctcgcctgaa ccgtctcgcc tgttccgtcg
     2281 tcgtcgccca ccccggccgg cagcagcgcc gagatcgagg agccgcgcgt ccgcaccgtc
     2341 gtcgagcgct acctgcacgg gctcaagttc aacgacgtgg aaagcctgcg ctccgccttc
     2401 gcgccggatg cgaagctcgt gtgggtgaag cgtgacggca cggtgggaca gctctcgcag
     2461 gcggactggt accgcagctt cgccgcgaac gccggcaagg aagaggaggg cgacctctcg
     2521 atcgcatccg tcgacctcac gggcgacgtg gcgtcggtga aggtggtgga gacgtacccg
     2581 aaggaggtgt acgtggacta cctcaacctc gtgcgggctg gcggcgagtg gcgcatcgtg
     2641 aacaaggtgt acacgaggtg gtcgaagtaa tggcgtgagc tggccacgcc cggacaccgc
     2701 gcggtagctt ccgggcgtgc gcactctctc gattcgccgt tcgtgctccc tgctggcgct
     2761 ctgcgccggc ctcgctcgtg cccaggcgcc gagcgtggtg gagcgggact tcgtcgcccg
     2821 cgacgtgcgc tttgcgtcgg gcgactccct gcccaccctc acgctccatt atcgcaccct
     2881 gggccagccg cggcgggatg cggcgggcgt ggtgcgcaac gcggtgctga tcctccacgg
     2941 caccacgggg tcgggagcgc agttcctcag ccgccccttc gccggtgagc tctacggccc
     3001 cgggcagccg ctcgacacct cgctctactt cgtcgtcctc cccgacggca tcgggcatgg
     3061 ccagtccagc cggccgagcc aggggctgca cgcccgcttt ccccggtaca cgtacgacga
     3121 cat
//
LOCUS       DASSYW010001026         4513 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_823330, whole genome shotgun sequence.
ACCESSION   DASSYW010001026 DASSYW010000000
VERSION     DASSYW010001026.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4513)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4513)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4513
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_823330"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..878
                     /locus_tag="VFN38_16220"
     CDS             <1..878
                     /locus_tag="VFN38_16220"
                     /inference="COORDINATES: protein motif:HMM:NF012686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013371.1"
                     /translation="KMLSFYPGLDRPHTVFAGLIGGAFLAMASHGTDQLIVQRLMSSR
                     SLKDAQRAIVGSGFVVFLQFFLFLSIGLGLWAFYHGQLFPATDQIFPTFILEHMPPGL
                     VGLIVAAIVAATMSTHSGAINSLAAATTHDIYLPLTKRAPDDANTLKMGRRFALMWGT
                     VLTLGALLFPQDTKTPVVVIALGIASFTYGGLLGGFFLGIFWRRAIQRDAILGMSIAI
                     ATMAFIVFAGPISATWPSLAGTLAPFGRIAWPWYVLIGTTITLIVGIVSSLTHPMPAH
                     DPLTSLSMRPDARPS"
     gene            875..1807
                     /locus_tag="VFN38_16225"
     CDS             875..1807
                     /locus_tag="VFN38_16225"
                     /inference="COORDINATES: protein motif:HMM:NF013986.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BadF/BadG/BcrA/BcrD ATPase family protein"
                     /protein_id="HET9013372.1"
                     /translation="MTFIVIGVDGGGSKTRAIVANEHGTQLGEVVGPASAVKPGQAEA
                     SAEVIAATVRDALASCEMTHVVPKVVCIGVAGVAREQERQALWQALVGREIAEEIVVH
                     PDFSIALDDAFGDDAGILLISGTGSVAFGRGPSGAIARCGGWGPMCGDEGSGAWVGRR
                     ALSVVTASADGREPETALMGAVLTAAQVNEPRELVAWAANATPTQLATLAPVVSSVAD
                     AGDLRANAIISLAVEELVLHVRALARQLFGDERAAIPVAFTGGMLTKGTTLRKRLEHR
                     LRSAVPGAQLHAQEVNAARGAVRGALRYLGETAV"
     gene            complement(1838..3160)
                     /locus_tag="VFN38_16230"
     CDS             complement(1838..3160)
                     /locus_tag="VFN38_16230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dicarboxylate/amino acid:cation symporter"
                     /protein_id="HET9013373.1"
                     /translation="MRRISQTQWIVISMVLGILIGYLFPDRPDGTPGFQASDLQVLST
                     VFLRMIKSLIVPLLFATLVVGIAGHGDDMKRVGKLAFRSIVYFEIVTTLALIVGLVAV
                     NLVKPGRGVNLASASAETGVELSKTQTTFSGVIEHTVPQSFFEAAAKNEVLQIVFFAI
                     IFAVALSQVQGPAKIFMLSFCESLSEVMFKFTGIVMAFAPFGIGAAIAVTVGKSGLGV
                     LRNLGVLVLTLYGALIVFVLFVLLPVAIAFKVPLRRFWQATKEPWLIAFTTASSEAAL
                     PLALQNMEKLGVPRRIVSFVLPTGYSFNLDGSTLYLALASVFVAQAAGIDMPLSAQIL
                     MMLTLMLTSKGVAAVPRASLVILSGALAQFGLPLQGVAVILGVDALMDMARTSINLVG
                     NCLATVVMARWEGTFDTPGSDMPVTDQLAGAPLQMPVVREGGERPFGG"
     gene            complement(3212..>4513)
                     /locus_tag="VFN38_16235"
     CDS             complement(3212..>4513)
                     /locus_tag="VFN38_16235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HET9013374.1"
                     /translation="LVFSFVLLGAACALAALCYAELAAMIPQAGSAYAYSYATLGEIV
                     AWIIGWDLILEYAVGNVAVAISWGDYFKTLTGGLLNLPVWLTTGYRTALLSSDPGIHG
                     LLASAPRVAGIPILVNLPAFAIVAVITWVLLRGVRESARANNIMVVIKLLALALFVGV
                     GMTKITPANYQPFAPYGFEGIHHGAAIVFFAYIGFDAISTAAEETKDPQRNLPIGILG
                     GLAICTVIYVIVGAVLTGMVPYRELDPSLHADPLAYALQRVGMQGAGWFVALGAVFSM
                     TAVLLVFQYGQPRIFYAMARDGLLPKWAARVSHKARVPYATTVLTGLFVGLWALIGDA
                     GETYDLTNIGTLFAFALVCIGVLVLRYTQPDRPRPFRVPFVWPVCLGGAAACLFVMWG
                     LPRQAWERFAIWLGIGLVLYFVYSYRNSTLRRGAAGLPPNR"
BASE COUNT          726 a         1601 c         1566 g          620 t
ORIGIN      
        1 cgaagatgct gagcttctac ccggggctcg accggccgca caccgtgttc gcggggctca
       61 tcggcggcgc cttcctcgcc atggcctccc acggcaccga ccagctcatc gtccagcgcc
      121 tcatgtcgtc ccggtcgctc aaggacgcgc agcgggcgat cgtcggatcc ggcttcgtcg
      181 tgttcctcca gttcttcctg ttcctctcca tcggcctggg cctctgggcg ttctatcacg
      241 gccagctgtt cccggccacc gatcagatct tcccgacctt catcctcgag cacatgccgc
      301 cgggcctcgt ggggctcatc gtcgcggcga tcgtggccgc cacgatgagc acccactcgg
      361 gcgccatcaa ctcgctggcc gcggcgacga cccacgacat ctacctgccg ctcaccaagc
      421 gggcgcccga cgacgccaac accctcaaga tggggcgccg gttcgcgctg atgtggggga
      481 cggtgctcac gctgggcgcc ctgctcttcc cccaggacac gaagacgccg gtcgtcgtga
      541 tcgccctcgg catcgcgtcg ttcacctacg gcgggctcct cggcggcttc ttcctcggca
      601 tcttctggcg gcgcgccatc cagcgcgacg cgatcctcgg catgtcgatc gcgatcgcga
      661 cgatggcgtt catcgtcttc gccggcccga tctcggcgac ctggccgtcg ctggccggca
      721 cgctggcgcc cttcggccgg atcgcctggc cctggtacgt cctgatcggc acaaccatca
      781 cgctcatcgt cggcatcgtg tccagcctca cccatcccat gccggcgcac gacccgctca
      841 cttccctctc gatgcgcccg gacgcccgcc cgtcatgacc ttcatcgtca tcggcgtgga
      901 tggcggcggc tccaagacgc gcgccatcgt cgcgaacgag catggcaccc agctcggcga
      961 ggtggtgggg ccggcgagcg ccgtgaagcc gggccaggcg gaggcgtcgg cggaggtgat
     1021 cgcggccacc gtgcgcgacg cgctcgcgtc gtgcgagatg acgcacgtgg tgccgaaggt
     1081 ggtctgcatc ggcgtggccg gcgtggcgcg cgagcaggag cgtcaggcgc tctggcaggc
     1141 gctcgtcggc cgcgagatcg ccgaggagat cgtcgtccac cccgacttct ccatcgccct
     1201 cgacgatgcc ttcggcgacg acgcggggat cctcctcatc agcggcaccg ggtcggtggc
     1261 gttcggccgg ggaccctccg gcgccatcgc gcgctgcggc ggctgggggc cgatgtgcgg
     1321 cgacgagggg agcggcgcgt gggtgggacg ccgcgccctg agcgtcgtga cggcgtcggc
     1381 cgacgggcgc gagcccgaga ccgcgttgat gggggcggtg ctgacggcgg cgcaggtgaa
     1441 cgagccgcgc gagctggtcg cctgggcggc gaacgcgacg cccacgcagc tggcgacgct
     1501 ggcccccgtg gtgagcagcg tggccgacgc cggcgacctg cgcgcgaacg cgatcatcag
     1561 cctcgcggtg gaggagctcg tcctgcacgt gcgcgcgctg gcgcggcagc tgttcggcga
     1621 cgagcgcgcc gccatcccgg tggccttcac gggggggatg ctcaccaagg gcacgacgct
     1681 gcggaagcgg ctcgagcacc ggctgcggag cgccgtgccg ggcgcgcagc tccatgccca
     1741 ggaggtgaac gccgcgcggg gggcggtgcg cggcgcgctg cggtacctgg gggagacggc
     1801 ggtctagctc gggggttcgt ccccgccccg agcgccccta gccgccgaag gggcgctcgc
     1861 cgccttcccg caccaccggc atctgcagcg gcgccccggc cagctggtcg gtcaccggca
     1921 tgtccgagcc cggggtgtcg aacgtcccct cccaccgcgc catcaccacc gtcgccaggc
     1981 agttgccgac gaggttgatc gaggtgcgcg ccatgtccat cagggcgtcc acgccgagga
     2041 tcacggccac cccctggagc ggcaggccga actgcgccag cgcgcccgag aggatcacga
     2101 gcgacgcgcg cggcaccgcc gccacccctt tgctcgtgag catcagggtg agcatcatca
     2161 ggatctgcgc cgacaggggc atgtcgatcc ccgccgcctg cgccacgaac accgacgcga
     2221 gggccaggta cagcgtgctg ccgtcgaggt tgaacgagta gccggtgggc agcacgaacg
     2281 acacgatccg gcgcggcacg ccgagcttct ccatgttctg gagcgccagc ggcagcgccg
     2341 cctccgacga ggccgtggtg aaggcgatca gccagggctc cttcgtcgcc tgccagaagc
     2401 ggcgcagcgg caccttgaag gcgatggcga cgggcagcag cacgaacagc acgaacacga
     2461 tgagcgcgcc gtacagcgtg agcaccagca cgcccaggtt ccgcagcacc ccgagcccgc
     2521 tcttgcccac cgtgacggcg atggcggccc cgatgccgaa cggcgcgaac gccatcacga
     2581 tgccggtgaa cttgaacatc acctcgctca ggctctcaca gaacgagagc atgaagatct
     2641 tcgccggccc ctgcacctgg gacagcgcga cggcgaagat gatggcgaag aagacgatct
     2701 ggagcacctc gttcttcgcc gccgcctcga agaagctctg gggcaccgtg tgctcgatga
     2761 cgccggagaa ggtcgtctgc gtcttcgaga gctcgactcc cgtctcggcc gatgccgagg
     2821 cgaggttcac cccccggccc ggcttcacga ggttcaccgc caccaggccg acgatcagcg
     2881 ccagcgtcgt gacgatctcg aagtacacga tcgaccggaa ggcgagcttc ccgacccgct
     2941 tcatgtcgtc gccgtggccg gcgatcccca cgaccagcgt cgcgaacagg agcggcacga
     3001 tcagcgactt gatcatgcgc aggaacaccg tcgacaggac ctggaggtcc gacgcctgga
     3061 agccaggggt cccgtcgggg cgatcgggga agagatagcc gatcaggatg ccgaggacca
     3121 tcgagatgac gatccactgc gtctgcgaga tccggcgcaa tccggagcgc gggggcgtcg
     3181 gcgccgccgc ggttgctgct ccagtcatcg gtcagcgatt cgggggaagt ccggcagcgc
     3241 cgcggcgcag cgtcgagttg cggtagctgt agacgaaata gagcacgagg ccgatgccca
     3301 gccagatggc gaagcgctcc cacgcctggc gggggagccc ccacatcacg aacaggcagg
     3361 ccgcggcccc gccgagacag acgggccaca cgaatggaac gcggaagggg cgcggccggt
     3421 cgggctgggt atagcgcagc acgaggacgc cgatgcagac cagggcgaag gcgaacagcg
     3481 tgccgatgtt cgtgagatcg taggtctcgc ccgcgtcgcc gatgagcgcc cacaggccga
     3541 cgaacagtcc cgtcagcacc gtggtcgcgt acggcaccct ggccttgtgg ctcacccggg
     3601 cggcccactt cggcagcagg ccgtcgcgcg ccatcgcgta gaagatgcgc ggctgcccgt
     3661 actggaacac cagcagcacc gccgtcatgg agaacacggc accgagcgcc acgaaccagc
     3721 ccgccccctg catccccacc cgctgcagcg cgtacgccag ggggtcggcg tgcaggctgg
     3781 ggtcgagctc gcggtacggc accatccccg tgagcaccgc gcccacgatg acgtagatga
     3841 cggtgcagat ggccagcccc ccgaggatcc cgatcggcag gttgcgctgc ggatccttcg
     3901 tctcctccgc cgccgtcgag atcgcgtcga agccgatgta ggcgaagaag acgatcgccg
     3961 cgccgtggtg gatcccctcg aacccgtacg gggcgaaggg ctgatagttg gccggggtga
     4021 tcttcgtcat gcccacgccc acgaacaggg cgagcgccag cagcttgatc acgaccatga
     4081 tgttgttcgc ccgcgcgctc tcgcgcacgc cccgcagcag cacccaggtg atgaccgcga
     4141 cgatcgcgaa cgccggcagg ttcacgagga tggggatgcc ggcgacacgg ggcgcggacg
     4201 cgagcagccc gtggatcccg gggtcggagc tgaggagcgc cgtgcggtag cccgtcgtga
     4261 gccagacggg gaggttcagc agcccgccgg tgagcgtctt gaagtagtcg ccccaggaga
     4321 tcgccacggc cacgttgccg acggcgtact cgaggatcag atcccacccg atgatccacg
     4381 cgacgatctc gccgagcgtc gcgtaggaat aggcgtaggc gctgccggct tgcggaatca
     4441 tcgcggccag ctccgcataa cagagcgcgg ccagcgcgca cgcggcgccg agcaggacga
     4501 acgaaaacac cag
//
LOCUS       DASSYW010001027         2973 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_168743, whole genome shotgun sequence.
ACCESSION   DASSYW010001027 DASSYW010000000
VERSION     DASSYW010001027.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2973)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2973)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2973
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_168743"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1011)
                     /locus_tag="VFN38_16240"
     CDS             complement(<1..1011)
                     /locus_tag="VFN38_16240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013375.1"
                     /translation="MTVKNRFGAWGLFSVAAAAVAASTLLTVHGQGLPKCDPDNGGIR
                     LPMGFCALVAADNLGAARHMVAARNGDLYVALMTSGGRGQPQTGGGAVALRDANNDGK
                     FEVVERFGSGSSTGIAIRNGYVYLAHPQVIERFKLTEGTLKPTGGAETIVSGFPSDRQ
                     HEDKGIAFDGRGGLYTNVGAPSNACQNPDRRPGVKGQDPCPLLEKHAGIWKFDENKPG
                     QTHDQGTRFATGLRQMPAITWHDDALFIAMNNRDQLDVFWPSLFTPKDNAERPAEPLY
                     RAVQGSNFGWPYCFYDYTTKMMVLNPEYGGDGKNVGRCSMFTPPLVAFPAHWAPVDVK
                     FYT"
     gene            1069..1206
                     /locus_tag="VFN38_16245"
     CDS             1069..1206
                     /locus_tag="VFN38_16245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013376.1"
                     /translation="MPRFFWLMKCEPAAYAIGDLARVLPATKAEYDIVVRLGREARSV
                     P"
     gene            1203..2333
                     /locus_tag="VFN38_16250"
     CDS             1203..2333
                     /locus_tag="VFN38_16250"
                     /inference="COORDINATES: protein motif:HMM:NF044863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013377.1"
                     /translation="MITTPYPAAAIVAPRIRDYFLRHTAAAHCEAGAPVPDAAVLESL
                     INVAFWTSLRREEGFVPKMSLAYVRPTDDGHAMRFEQPMPLTPHTMAKVAPVVERAGI
                     HLGVWTQNGEPYAWGTTRSIPMFGLVIEIVEPALLVVKHHRGEKTGKYVNVAVLEGDQ
                     VKLVDETASSLPDCPALVGSLLGFDSPKSWVGSMNVLVQLAVSMRAHGRGGLLLVVPS
                     TSETWRDSMVAPMAYAISPPYRGLSELVREGVTGRTGDRFQQALRDVVDVIAGLTAVD
                     GAAVMTDSYEMLAFGAKIARRRGSPQVEQVTVTEPVVGGEARTMTPAQLGGTRHLSAA
                     QFVHDQRDAIALVASQDRRFTVFAWSPCSDQVHGHQVETLLL"
     gene            2466..>2973
                     /locus_tag="VFN38_16255"
     CDS             2466..>2973
                     /locus_tag="VFN38_16255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013378.1"
                     /translation="MTFKTSSESAVRRAVAVALLAACAALVVACGDDGGGTSDPAQPP
                     SSSPPATSAQNPCPLPRASVSSVDGTRSAKANQPTRVDPRSTLADILARHQEAQGRAR
                     PLATASPVASADVGEIAVIQDEGDLVTPPNSFDLQGTGLRFTPRSGGYDVSRIDGSFQ
                     AAIGDPITL"
BASE COUNT          424 a         1040 c         1015 g          494 t
ORIGIN      
        1 ggtgtagaac ttcacgtcca ccggtgccca gtgcgcgggg aacgccacca gcggcggcgt
       61 gaacatgctg cagcggccca cgttcttccc gtcgccgccg tactccgggt tcagcaccat
      121 catcttggtg gtgtagtcgt agaagcagta gggccagccg aagttcgacc cctgcacagc
      181 tcggtacagc ggctccgccg gacgttcggc gttgtccttc ggcgtgaaca ggctcggcca
      241 gaacacgtcg agctgatcgc ggttgttcat cgcgatgaag agcgcgtcgt cgtgccacgt
      301 gatcgccggc atctgccgca gcccggtggc gaagcgcgtg ccctggtcat gcgtctgccc
      361 cggcttgttc tcgtcgaact tccagatgcc ggcgtgcttc tcgagcagcg ggcacgggtc
      421 ctgccctttc accccggggc gccggtcggg attctggcag gcgttcgagg gcgcgccgac
      481 gttggtgtag agcccgccgc ggccgtcgaa ggcgattcct ttgtcctcgt gctggcgatc
      541 ggacgggaag ccgctgacga tcgtctcggc gccgccggtc ggcttcagcg tgccctcggt
      601 gagcttgaag cgctcgatga cctgcgggtg cgccaggtag acgtagccgt tgcggatcgc
      661 gatgccggtg ctgctgccgg agccgaagcg ctcgacgacc tcgaacttgc cgtcgttgtt
      721 cgcgtcgcgc agcgccaccg cgccgccgcc ggtctgcggc tgtccgcggc cgccgctcgt
      781 catcagcgcc acgtagaggt ccccgttgcg cgccgccacc atgtggcgcg ccgcgccgag
      841 gttgtcggcg gccacgaggg cgcagaatcc catcggcagg cggatgccgc cgttgtcggg
      901 gtcgcacttc ggcagcccct gtccgtgcac cgtgagcagc gtcgacgccg cgacggccgc
      961 cgccgcaacc gagaacaggc cccacgcgcc gaaccgattc ttcaccgtca tgcgtctctc
     1021 cctctcgcgc ggatcctatc accaggccct tccacgtatg cttgagacgt gccccgcttc
     1081 ttctggctca tgaagtgcga acccgccgcc tacgccatcg gcgatcttgc gcgggtgctg
     1141 ccggccacca aggccgagta cgacatcgtg gtcaggctcg gccgagaggc ccggagcgtg
     1201 ccgtgatcac cactccctac cccgccgccg cgatcgtcgc gccgcggatc cgcgactact
     1261 ttctccgcca caccgccgcc gcgcactgcg aggcgggcgc gccggtaccc gacgccgccg
     1321 tgctggaaag cctgatcaac gtggcgttct ggaccagcct ccggcgcgag gaagggttcg
     1381 tgccgaagat gtcgctcgcg tacgtgcggc cgacggacga cggccatgcg atgcgcttcg
     1441 aacagccgat gccgctcaca ccgcacacga tggccaaggt ggcgccggtc gtggagcgcg
     1501 ccgggatcca tcttggcgtg tggacgcaga acggcgagcc gtacgcctgg ggcaccacgc
     1561 gatccattcc gatgttcggc ctggtcatcg aaatcgtgga gccggcgttg ctcgtcgtga
     1621 agcatcaccg cggcgagaag accgggaagt acgtcaacgt cgccgtgctc gaaggcgatc
     1681 aggtgaagct cgtggacgag acggcgtcga gcctgccgga ctgcccggcg ctcgtggggt
     1741 cgctccttgg cttcgactct ccaaagtcgt gggtgggctc gatgaacgtg ctcgtgcagc
     1801 tggccgtttc gatgcgcgcg cacggacggg gcgggctgct gctcgtggtg ccctcgacct
     1861 ccgagacctg gcgcgactcg atggtcgcgc caatggccta tgccatctcc ccgccctatc
     1921 gggggctgag cgagctggtg cgcgaagggg tcactggccg gacaggcgac cgcttccagc
     1981 aggccctgcg cgacgtggtg gacgtcatcg ccggcctgac ggccgtggat ggcgccgccg
     2041 tgatgaccga ctcgtacgag atgctcgcct tcggcgccaa gatcgcgcgc cggcgcgggt
     2101 cgccgcaggt cgagcaggtc acggtcaccg agccggtcgt cggcggcgaa gcacgcacca
     2161 tgacgccggc gcagctcggc ggcacacggc atctgtcagc cgcccagttc gtgcacgacc
     2221 agcgcgacgc cattgcgctc gtcgcgtcgc aggatcggcg cttcacggtt ttcgcgtggt
     2281 caccgtgctc ggaccaggtg cacggccatc aagtggagac gctgctgctg taacctagcg
     2341 aggctgcgcc tcggatcggc gtacatgcag gctccgcctc gctagccagt atctatttgg
     2401 cccgccctgc gagcgggcgt ggacgtcttg aacggacgct tcgacttgat tgtctgtgag
     2461 ggaccttgac gttcaagacg tccagcgagt cagcggttcg gcgcgccgtg gcggtggccc
     2521 tcctcgcggc gtgcgccgcg ctcgtcgttg cctgcggcga cgacggcggc ggcacctccg
     2581 atcccgccca gcccccgtcg tcgtcacctc ccgccaccag cgcacagaat ccctgtccgc
     2641 tgccgcgcgc gtcggtgtcg agtgtcgacg gaacccgatc ggcgaaggcg aatcaaccga
     2701 cgcgcgtcga tccgcgcagc acgctggccg acatcctggc gcggcaccag gaggcgcaag
     2761 ggcgcgcgcg ccctctggcc acggcgtcgc cggtggcgtc cgccgacgtg ggagagattg
     2821 ccgtgattca ggacgagggc gacctcgtca caccgccgaa cagtttcgat ctgcagggaa
     2881 cgggccttcg cttcacgccg cgaagcggcg gctacgacgt cagccggatc gacggctcgt
     2941 tccaggcggc catcggcgat ccgatcacgc tcc
//
LOCUS       DASSYW010001028         3056 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1742269, whole genome shotgun sequence.
ACCESSION   DASSYW010001028 DASSYW010000000
VERSION     DASSYW010001028.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3056)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3056)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3056
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1742269"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..365
                     /locus_tag="VFN38_16260"
     CDS             <1..365
                     /locus_tag="VFN38_16260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013379.1"
                     /translation="YLLTRPGRLSATAGMGAAVLLGAAWALVVTRLAIATARVQPEHD
                     PDDPRYVLQGHVATVSASIPADGEGTIAYGDLVDRRTLRARSIDGQPVDEGVEVCIER
                     VEDGVAFVELWALVEARL"
     gene            456..728
                     /locus_tag="VFN38_16265"
     CDS             456..728
                     /locus_tag="VFN38_16265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013380.1"
                     /translation="MSDAVIFVVVFVGFFVLRAVAATVFFLYLLPTGDRCPNCDAVTL
                     RVESPVMNRLLPMFRTSWCYECNWHGLLRRGPLTPVAPPVVLTKVK"
     gene            complement(721..1023)
                     /locus_tag="VFN38_16270"
     CDS             complement(721..1023)
                     /locus_tag="VFN38_16270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013381.1"
                     /translation="MPLPVTHGVPTLFIRRTAYERAGLTRATIDERLGLTDAEFQVDG
                     DLVALGPVYDVDALGGLVDDLEGAGLVYYDDFFELSGSWPEWLEIVVRAGGRASAT"
     gene            complement(1050..2402)
                     /locus_tag="VFN38_16275"
     CDS             complement(1050..2402)
                     /locus_tag="VFN38_16275"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HET9013382.1"
                     /translation="MRVPAIARPLLLLSTLAACAGSGGRVSPPPVVAAPAGPLALSPI
                     EASVRDYVRAHHEQDIALLERAVNISSGTQNLAGVRRVGDLFAAELSTMGFSVRWAEM
                     PASMRRAGHLVAERKGTKGARLLLIGHLDTVFEGEGQRFVREDSMARGAGTSDMKGGD
                     VAMLTALRALNATGALEGSQIIVVMTGDEESAGSPLELSRKDLIDAAKRSDIALAFEG
                     GRAARASIARRGSSGWTLNVTGRQGHSAGVFANGYGAVYEMARILDGFRRELAGDPTL
                     TFNPGLVAGGTTVQRDSAGTLVAAGKTNIISPTAIVQGDLRFLRETQKDSARARMREI
                     VAQHLPGTSAEILFRDSYPAMPPTTAGAQLLAQFDAVSRSLGYGMVEGDPPESRGAGD
                     VSFVAPYLTGMDGLGVSGRGAHSPEESVNLNTLTMAGERAAVLMYRLITGPTLERPRP
                     "
     gene            2510..>3056
                     /locus_tag="VFN38_16280"
     CDS             2510..>3056
                     /locus_tag="VFN38_16280"
                     /inference="COORDINATES: protein motif:HMM:NF013314.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HET9013383.1"
                     /translation="MSQSLPVLEAEFDVLVIGAGHAGTEAAVAAARRGARTALVTSAL
                     ETIGQMSCNPAIGGVAKGTVVREVDALGGIMGRATDLAALQFRMLNRSKGPAVWAPRA
                     QCDRGLYRRAVRSLVEAQPRVETIQGTVARLLFDHGRLAGVETLEGRRFGARCVVVTT
                     GTFLRGRIHIGTTTSLAGGRAG"
BASE COUNT          434 a         1084 c         1050 g          488 t
ORIGIN      
        1 gctacctgct cacccggccc gggaggttgt cggcgacggc tgggatgggt gcagccgtgc
       61 tgctgggtgc ggcctgggcg ctcgtcgtca cacggctcgc cattgccacg gcccgcgtac
      121 agccggagca cgatccggac gatccacgct acgtccttca aggccatgtc gcgacggtca
      181 gcgcatcgat tcccgcggac ggcgagggca cgatcgccta cggtgatctc gtcgatcgtc
      241 gcacccttcg ggcgagatcg atcgatggcc agccggtcga cgaaggggtg gaggtgtgca
      301 tcgaacgcgt cgaggacggc gtcgcgttcg tcgagctgtg ggcgctggtg gaagcgcggc
      361 tctaggactc cgcgcgctcc cgactggcat gacctacgca tgtggcgact gggcacgcgc
      421 gtgggtctcc gtctggagcg catcgaggag gagccgtgtc ggatgccgtg atcttcgtgg
      481 tggtctttgt cggcttcttc gtgcttcgcg ccgtcgccgc tacggtgttc ttcctgtatc
      541 tgctgcccac cggcgatcgc tgcccgaact gcgacgccgt cacgctgcgc gtggaatcgc
      601 cggtgatgaa tcgcctgctg ccgatgttcc gcacgagctg gtgctacgag tgcaactggc
      661 acggcctgct gcgacgcggg cccctcactc cggtcgcgcc tccggtcgtg ctcacgaagg
      721 tcaagtagcg gacgcgcgcc ctccggcacg caccacgatc tccagccatt cgggccagct
      781 gccgctcagc tcgaagaagt cgtcgtagta gacgagtccc gccccctcca ggtcgtccac
      841 gagaccgccg agcgcatcca cgtcgtacac gggacccagc gccaccagat ccccgtcgac
      901 ctggaactcc gcgtcggtga ggccaagccg ttcgtcgatt gtggcgcggg tgagccccgc
      961 gcgttcgtag gcggtgcgac gaatgaagag cgtggggacg ccgtgcgtca cgggaagtgg
     1021 catgtctcgc tccggtcggg gttatcgcgt catggacgtg gacgctcgag cgttgggccg
     1081 gtgatgaggc gatacatcag caccgcggca cgctcgccgg ccatcgtcaa tgtgttgagg
     1141 ttcaccgatt cctccggcga gtgcgccccc cggcccgaga cacccaggcc atccatgccg
     1201 gtgaggtacg gcgccacgaa cgacacgtcg ccggcgcctc ggctctccgg cggatccccc
     1261 tcgaccatcc cgtagcccag cgaacggctc acggcgtcga actgcgcgag aagctgcgcg
     1321 cccgccgtgg tcggcggcat cgcggggtag ctgtcgcgaa agaggatctc ggcactcgtg
     1381 ccaggaagat gctgggcgac gatctcgcgc atgcgcgccc gcgccgaatc cttttgcgtc
     1441 tcccgcagga accgcaggtc gccctgcacg atcgccgtcg gcgagatgat gttcgtcttt
     1501 cccgccgcga cgagcgttcc cgccgaatcg cgctgcacgg tggtcccccc ggccacgagc
     1561 cccgggttga aggtgagcgt cgggtcgccc gcgagctcgc gtcggaagcc gtcgaggatc
     1621 cgcgccatct cgtacaccgc gccgtatccg ttcgcgaaca cgccggcgga atggccctgg
     1681 cgtcccgtca cgttgagggt ccagccgctc gagccacgcc gcgcgatcga ggcgcgtgcc
     1741 gcacgtcccc cttcgaacgc cagcgcgatg tcgctgcgct tcgctgcatc gatgaggtcc
     1801 ttgcgggaca gctcgagcgg actgccggcg ctctcctcgt cgcccgtcat caccacgatg
     1861 atctgcgatc cttcgagcgc acccgtcgcg ttgagcgcgc gcagcgcggt gagcatcgcc
     1921 acgtcgcccc ccttcatgtc cgacgtgccc gcgccgcgcg ccatgctgtc ctcgcgcacg
     1981 aagcgctgcc cctcgccctc gaagaccgtg tcgagatgtc cgatgaggag caggcgcgcg
     2041 cccttcgtgc ctttccgctc cgccaccagg tgtcccgcgc gccgcatcga ggcgggcatc
     2101 tcggcccagc gaacggagaa gcccatcgtc gacagctcgg ccgcgaacag gtcgccgacg
     2161 cgacggaccc ccgccaggtt ctgcgtgccg ctggagatgt tcaccgcccg ctccagcagc
     2221 gcgatgtcct gctcgtggtg tgcgcgcacg tagtcgcgca cgctggcctc gatcggggag
     2281 agtgccaacg ggcccgcagg cgccgcgacg accggcggcg gcgacacgcg cccgccggat
     2341 ccggcgcacg ccgcgagcgt cgagaggagc aggaggggcc gagcgatggc aggaacacgc
     2401 atgagatggg cggcggctgg tggacgggct ggtgcgacgc aagctacctc ggtgttgcca
     2461 tcccctccac cggagcgccg agccctgcgt ggaggcgcta tctttcggca tgtcgcagtc
     2521 tcttcccgtg ctcgaggccg agttcgacgt gctcgtcatc ggcgccggac atgccggcac
     2581 cgaagccgcc gtcgcggcag cacggcgagg tgctcgcacc gccctcgtga ccagcgcgct
     2641 cgagacgatc ggccagatgt cgtgcaatcc ggccatcggc ggcgtcgcca agggcacggt
     2701 agtgcgcgaa gtcgatgcgc tgggcgggat catggggcgg gcgaccgacc tcgccgccct
     2761 gcagttccgg atgctcaacc gcagcaaggg ccccgccgtg tgggccccac gggcccagtg
     2821 cgaccgcgga ctgtatcgcc gcgcggtgcg ctcactcgtc gaagcgcagc cacgcgtgga
     2881 gaccatccag ggaacggtcg cgcggctcct gttcgatcac gggcgtctcg ccggtgtcga
     2941 gacgctcgaa ggacggcgct tcggtgcgcg ctgtgtcgtc gtcacgaccg gcaccttcct
     3001 ccgtggccgc atccatatcg gcaccacgac gtcgctcgcc ggcggacggg ctggcg
//
LOCUS       DASSYW010001029         3057 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_29163, whole genome shotgun sequence.
ACCESSION   DASSYW010001029 DASSYW010000000
VERSION     DASSYW010001029.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3057)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3057)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3057
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29163"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..392)
                     /locus_tag="VFN38_16285"
     CDS             complement(<1..392)
                     /locus_tag="VFN38_16285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013384.1"
                     /translation="MIAISVDVDWAPDEVIEDTLALLDQAGVCATIFATHATPLLRGL
                     TGHEIGLHPNFLPHPLSSCEQVFDDLHAEYPAARGVRCHSYHQSSPLLQLFARRGMAY
                     DSNVVMFGGRGIRPFRHWNGLTRLPVFW"
     gene            complement(389..1198)
                     /locus_tag="VFN38_16290"
     CDS             complement(389..1198)
                     /locus_tag="VFN38_16290"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: protein motif:HMM:NF012760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004479 - methionyl-tRNA formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0071951 - conversion of methionyl-tRNA to
                     N-formyl-methionyl-tRNA [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HET9013385.1"
                     /translation="MRIVFFGATALGHACAERLLEAGQEVVGLVTMPRDFRISYSPSG
                     PVRNVLHRDFHALGERYGIPVTQVDGRMAEYVSDVEKLRPDLLVVIGWYYMIPRRMRD
                     LAPLGCVGIHASLLPRYRGGAPLVWALINGETETGVTLFHFTDGVDDGDVVAQERFAI
                     EPRDTIADLLAKAEAASLRLVTEYVPRFADGTAPRVPQDQSAATSFPQRSPQDGRIDW
                     SWDAPRIDRFIRAQTKPYPGAFATVGGKRVTIWSADVEELPEADVGGERPA"
     gene            complement(1201..2139)
                     /locus_tag="VFN38_16295"
     CDS             complement(1201..2139)
                     /locus_tag="VFN38_16295"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF025217.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HET9013386.1"
                     /translation="MGALERLGHVASAAGDVSSAQTQTEEAFGFKWARRDTYESAAVQ
                     ETVREWLFDRYCGGDPAVLDGWLAGGRKLILDAGCGAGHAALLFFGERLREHDYLGLD
                     ISSAVQVARARFAERGIPGEFLRADLTTIDLPPGSVDLIFSEGVLHHTDDTGRAMRHL
                     SRALAPGGRFAFYVYVKKAVLREFSDDHIRDALRPLSDEEAWTALEPLTKLGIALGKL
                     GVTLDVPEDIPYLGIKKGPIDLQRFFYWNVAKLYYRPDWTLDEMNHINFDWYRPLNCH
                     RHTPEEVEGWCREAGLEIERLKVEDAGITVVARRPR"
     gene            complement(2142..>3057)
                     /locus_tag="VFN38_16300"
     CDS             complement(2142..>3057)
                     /locus_tag="VFN38_16300"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013227.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HET9013387.1"
                     /translation="EHLGGKPVFVDVDLRTFNIDPAAAAAAITPRTVGMIPVHLFGLS
                     ADMDPLLALAKRHGLWVLEDAACGFDTWYKGWHVGTMGEIGAFSFHPRKAITTGEGGM
                     ITTADARLDALCRTLRDHGASKSDLDRHEQKYSFLLAEYKHLGFNFRMTDIQGALGVA
                     QMRKAHRIQEGRKAAAAWYDELLAGVPWLELPFRHPDYGHGFQSYVCLFQPEAPTLDS
                     VQRIFDRRNAIMASLESQGIITRQGTHAPPHLDYYRDKYGYRPEDFPRAYLAERISLT
                     LPVYAGMTRDECVQVTTALHDAFSHPER"
BASE COUNT          476 a         1046 c         1074 g          461 t
ORIGIN      
        1 tcccagaaga ccggcagccg ggtcagcccg ttccagtggc ggaacgggcg gatcccgcgc
       61 cccccgaaca tgacgacgtt ggagtcgtac gccatgccgc gtcgcgcgaa cagctggagc
      121 agcggcgagc tctgatgata cgaatgacac cggacgccgc gcgccgcggg atactcggcg
      181 tgcaggtcgt caaagacctg ctcgcacgac gacagcgggt gcggcaggaa gttcggatgc
      241 aggccgatct cgtggccggt cagcccgcgc agcagcggcg tggcgtgggt cgcgaagatc
      301 gtggcgcaca cgccggcctg atcgaggagc gccagggtgt cctcgattac ctcgtccggg
      361 gcccagtcca cgtcgacgct gatggcgatc atgccgggcg ctctccgccg acgtcggcct
      421 cgggcagctc ctcgacatcg gcgctccaga tcgtgacgcg cttgccgccg acggtggcga
      481 acgctccggg gtacggcttc gtctgcgcgc ggatgaaccg gtcgatgcgc ggcgcgtccc
      541 agctccagtc gatgcgcccg tcctgcggcg accgctgcgg aaaggacgtg gcggccgact
      601 ggtcctgcgg cacgcgcggc gcagtcccgt ccgcgaagcg gggcacatac tcggtgacga
      661 gccggaggct cgcggcctcc gccttcgcga gcagatcggc gatcgtgtcg cgcggctcga
      721 tggcgaagcg ctcctgcgcc acgacgtcgc cgtcgtccac gccatcggtg aagtggaaca
      781 gcgtgacccc ggtctcggtc tcgccgttga tgagggccca cacgagcggc gcgccgccgc
      841 gatatcgcgg cagcagcgac gcatggatgc cgacgcagcc gagcggcgcg aggtcgcgca
      901 tgcggcgcgg gatcatgtag taccacccga tgacgacgag caggtccgga cgaagcttct
      961 cgacgtcgct cacgtactcc gccatgcgcc cgtcgacctg cgtcaccgga atcccgtacc
     1021 gctcgccgag cgcgtggaaa tcccgatgga gcacgttgcg gacggggccg gacggcgaat
     1081 acgagatccg gaagtcgcgt ggcatcgtga cgagccccac gacctcctgc cccgcctcga
     1141 gcagccgttc ggcgcatgcg tggccgagcg ccgtggctcc gaagaagacg atgcgcacgg
     1201 tcagcgcggg cgtcgcgcga cgacggtgat cccggcgtcc tccaccttga ggcgctcgat
     1261 ctcgagcccc gcctcccggc accacccctc cacctcttcc ggcgtgtgcc ggtgacagtt
     1321 gagcggacgg taccagtcga aattgatgtg gttcatctcg tccagcgtcc agtccggacg
     1381 gtagtacagc ttggcgacgt tccagtagaa gaagcgctgc aggtcgatcg ggcccttctt
     1441 gatgccgagg tacggaatgt cctccggaac gtcgagcgtg accccgagct tgccgagcgc
     1501 gatcccgagc ttcgtcagcg gctccagcgc cgtccaggct tcctcgtccg acagcgggcg
     1561 cagcgcatcg cggatgtgat cgtcgctgaa ctcgcgcagc accgccttct tcacgtacac
     1621 gtagaaggcg aaacggccgc ccggcgcaag cgcgcgcgag agatgccgca tcgcgcgccc
     1681 cgtgtcgtcg gtgtggtgca gtacgccttc cgagaagatc aggtcgacgg accccggcgg
     1741 caggtcgatc gtcgtcaggt cggcacgcag gaactcgccc gggatcccgc gctccgcgaa
     1801 gcgcgcgcgc gcgacctgga ccgcgctgga gatgtcgagt ccgaggtagt cgtgctcgcg
     1861 gagccgctcg ccgaagaaga ggagcgcggc gtgtccggcg ccgcacccgg cgtcgagaat
     1921 cagcttgcgg ccgccggcga gccagccatc cagcacggcg ggatcgccgc cgcagtaccg
     1981 gtcgaacagc cattcgcgca ccgtctcctg cacggcggcg gattcatacg tgtcgcggcg
     2041 cgcccacttg aatccgaacg cctcctcggt ctgcgtttgc gcggaggaga cgtctccggc
     2101 ggcggacgcc acgtggccga gtcgttcgag tgcgcccatg gtcagcgctc ggggtgcgag
     2161 aaggcatcgt gcagcgcggt cgtgacctgc acgcattcgt cgcgcgtcat gcccgcatag
     2221 acgggcagcg tgagcgagat gcgctcggcc aggtacgcgc ggggaaaatc ctcgggccgg
     2281 tagccgtact tgtcgcgata gtagtccagg tgcggcggcg cgtgcgtgcc ctgccgcgtg
     2341 atgatgccct gcgactcgag cgacgccatg atcgcgttgc gccggtcgaa gatgcgctgc
     2401 accgaatcga gcgtcggggc ctcgggctga aagaggcaca cgtacgactg gaagccgtgc
     2461 ccgtaatcgg ggtgccggaa ggggagctcc agccagggga cgcccgccag gagctcgtcg
     2521 taccaggcgg ccgccgcctt gcgtccctcc tggatccggt gtgccttccg catctgggcg
     2581 acgccgagcg cgccctggat gtccgtcatc cggaagttga acccgagatg cttgtactcc
     2641 gccagcagga aggagtactt ctgctcgtgc cgatcgaggt cggacttgct cgcgccgtga
     2701 tcgcgcaggg tccggcacag cgcgtcgagt cgcgcgtcgg ccgtcgtgat catcccccct
     2761 tcgccggtcg tgatcgcctt gcgcgggtgg aaggagaagg cgccgatctc gcccatcgtg
     2821 ccgacgtgcc atcccttgta ccaggtgtcg aacccgcacg cggcgtcctc gagcacccac
     2881 aggccgtgcc gcttcgcgag cgccagcagc ggatccatgt cggccgacag gccgaacagg
     2941 tgcaccggga tcatgccgac ggtgcgcggc gtgatcgccg cggccgcggc ggcgggatcg
     3001 atgttgaagg tgcgcaggtc gacgtcgacg aacaccggct tgccgcccag gtgctcg
//
LOCUS       DASSYW010001030         2550 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1374373, whole genome shotgun sequence.
ACCESSION   DASSYW010001030 DASSYW010000000
VERSION     DASSYW010001030.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2550)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2550)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2550
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1374373"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2064)
                     /locus_tag="VFN38_16305"
     CDS             complement(<1..2064)
                     /locus_tag="VFN38_16305"
                     /inference="COORDINATES: protein motif:HMM:NF013123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HET9013388.1"
                     /translation="MRLVRHSAFALAAAAALAPLGAQTTGDSTRITVERIFASPDFRG
                     GSIPQPSWSNSGSAYIIPRPAKDGGTELVKVDIATGRETVLAKADQLAAEGKRLEVEE
                     ITLSGDERMAILFHNSVQVWRTNTRGLFTVYDFRSGKLTPVSRRSGLQMFAKASPDGK
                     KVAFVRDNNLFVTDLATGREDQLTTDGTENIINGTTDWVYEEELGLRDAFRWSPDSRH
                     IAFWRFDQSAVPAMPIVNELGLYPKVSTLRYPKAGEPNSRVKVGVLHLGGGRPTWLDV
                     GPDTGQYLARMEWVGSDSLVVQRMPRRQNRVDVMLLSAATGRGRIVMTDRDSAYVDVE
                     NGDLRWIGAGQRQFLFLSDRSGWRQLYLYGRDGKVVRQLTTDGMDVLGVSGVDEANGF
                     VYVNAAAPTPMERNTYRVKLSGGAMERVTTQAGTHSFNISPDARYAVDIHSTINSPPT
                     ATLYSLPSMSVIRVLQDNAPLKARLAPLAVRPAQFIKVPMPDGTMLDGYRIVPAGFDS
                     TKKYPVLMYVYGGPASPQVNDSWGGTRGLWHQSLAQQGYVVVCVDNRGAAWRGRDFRK
                     TTQYTLGVKESQDQIDAAKWIGRQSWADAGRIGIWGWSYGGFMAANAAGRGGDVFKAA
                     LVVAPVTDWKLYDTIYTERFMWTPKENPAGYRDGSPQTYVNGVKARMLLVHGTGDDNV
                     HPQNTY"
     gene            complement(2259..>2550)
                     /locus_tag="VFN38_16310"
     CDS             complement(2259..>2550)
                     /locus_tag="VFN38_16310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013389.1"
                     /translation="AGVPAVELGKMKKQSGLRRSLIMPFTVLADIISRGVPVEAGVNA
                     IRSLVGAGAKDADLSKFQRNVSVDIEKGAPPAAAAETRAKGAVPPAKPEDQY"
BASE COUNT          350 a          870 c          914 g          416 t
ORIGIN      
        1 gtaggtgttc tgcgggtgga cgttgtcgtc gcccgtgccg tggacgagga gcatccgcgc
       61 cttcacgccg ttcacgtacg tctgcggcga gccgtcgcgg tagcccgccg gattctcctt
      121 cggcgtccac atgaaccgct cggtgtagat cgtgtcgtag agcttccagt cggtcaccgg
      181 cgcgacgacc agcgcggcct tgaacacgtc gccgccgcgg cccgcggcgt tcgcggccat
      241 gaacccgccg tagctccagc cccagatccc gatgcgcccg gcgtcggccc agctctggcg
      301 gccgatccac ttcgccgcgt cgatctggtc ctgcgactcc ttcacgccca gcgtgtactg
      361 ggtcgtcttg cggaagtcgc ggccgcgcca ggcggcgccg cggttgtcca cgcacaccac
      421 gacgtagccc tgctgggcca ggctctggtg ccagagaccg cgggtgcccc cccaggaatc
      481 gttcacctgc ggcgacgcgg gaccgccgta cacgtacatc agcaccgggt acttcttcgt
      541 gctgtcgaag cccgccggca cgatgcggta gccgtcgagc atggtgccgt cgggcatcgg
      601 caccttgatg aactgcgcgg gacgcacggc cagcggcgcg agcctggcct tgagcggcgc
      661 gttgtcctgc aacacgcgga tcacgctcat ggacggaagc gaatagagcg tcgccgtcgg
      721 cggggagttg atggtggagt ggatgtccac cgcgtacctc gcgtcggggc tgatgttgaa
      781 gctgtgcgtg cccgcctgcg tggtgacgcg ctccatggcg ccgccgctca gcttcacgcg
      841 ataggtgttg cgctccatcg gcgtgggggc ggcggcattc acgtacacga agccgttggc
      901 ttcgtccacg ccgctcacgc ccaggacgtc catcccgtcg gtcgtgagct ggcggacgac
      961 cttcccgtcg cggccgtaga ggtagagctg gcgccagccg ctgcggtccg agaggaagag
     1021 gaactggcgc tggccggcgc cgatccagcg gaggtccccg ttctcgacgt cgacgtacgc
     1081 gctgtcgcgg tcggtcatga cgatgcgccc tcgccccgtg gcggcgctga ggagcatgac
     1141 gtccacccgg ttctgccggc gcggcatgcg ctgcacgacg agggagtcgc tccccaccca
     1201 ctccatgcgc gcgaggtact gcccggtgtc ggggccgacg tcgagccagg tgggacgccc
     1261 gccgcccagg tgcaggacgc cgaccttcac gcgcgagttg ggctcaccgg ccttggggta
     1321 gcgcagcgtg gagaccttgg ggtacagccc gagctcgttc acgatcggca tcgccggcac
     1381 cgcgctctgg tcgaagcgcc agaaagcgat gtggcgggaa tcggggctcc agcggaaggc
     1441 gtcgcggagg ccgagctcct cctcgtacac ccagtccgtg gtgccgttga tgatgttctc
     1501 ggtgccgtcc gtcgtgagct gatcctcgcg accggtcgcg aggtcggtga cgaacaggtt
     1561 gttgtcgcgc acgaaggcga ccttcttccc gtcgggcgag gccttggcga acatctgcag
     1621 cccgctgcgg cgcgacacgg gcgtgagctt gccgctgcgg aagtcgtaca cggtgaagag
     1681 gccgcgcgtg ttggtgcgcc agacctgcac cgagttgtgg aagaggatcg ccatccgctc
     1741 gtcgccgctg agcgtgatct cctcgacctc gagccgcttg ccctccgcgg cgagctggtc
     1801 ggccttcgcg aggaccgtct ccctgcctgt cgcgatgtcc accttcacca gctcggtacc
     1861 gccatccttc gccggccgcg gaatgatgta cgcgctcccc gagttggacc acgagggctg
     1921 cggaatgctg ccaccgcgga agtccggcga ggcgaagatg cgctcgacgg tgatcctggt
     1981 ggagtcaccg gtggtctggg cgccgagcgg cgccagcgcg gcggcggcgg cgagggcgaa
     2041 cgcggagtga cggacgagac gcatggaggc ggtggttgag ggaagaatcg tatcttaccg
     2101 tggggtcgcg ccgtgtgaca ggcgggccgg cgggccggcg ctccgaccgc gcgccgtgcg
     2161 ccgccgctcg actcgatggg gcggcggaaa cggcgaaggg cacacgggac ggaaccccgt
     2221 atgcccttcg accctctgcc ggtgcggccg gcggatcgtc agtactggtc ctcaggcttc
     2281 gccgggggca cggcaccctt ggcccgggtc tcggccgcgg cggccggagg cgcccccttc
     2341 tcgatgtcga cgctgacgtt ccgctggaac ttgctgaggt ccgcgtcctt cgcccccgcg
     2401 ccgacgagcg agcggatggc gttcaccccg gcctcgaccg gcaccccgcg cgagatgatg
     2461 tcggcgagca cggtgaacgg catgatgagg gagcggcgca agccgctctg cttcttcatc
     2521 ttgcccagct ccaccgcggg gacgccggcg
//
LOCUS       DASSYW010001031         2300 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1116115, whole genome shotgun sequence.
ACCESSION   DASSYW010001031 DASSYW010000000
VERSION     DASSYW010001031.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2300)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2300)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2300
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1116115"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..977)
                     /locus_tag="VFN38_16315"
     CDS             complement(<1..977)
                     /locus_tag="VFN38_16315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013390.1"
                     /translation="MPRDAAPRARTIRTVADSSLGRLRPLRPWWSLLALAILILGSAP
                     FAIPPIRDAITLDQVAEATLRRPAGYLVMAPVSDVLDLLTLLSVRQHVALLLTLLLAY
                     LLWWGLRGRVMPPSVSPARRAARVAARIGLAVLALVAVYFGGALLPRPMAALEVGPEI
                     VAIDFHAHTRYSHDGRPDWTPEDVRDWHRDAGFAAAYVSDHRTFEGARDGWSNNPVLA
                     GQGVSLLPAIEVVWKGEHVNVLDADRMYRGIFNATLRDIDEDALRLASAVPGNEPVLI
                     ETLPGDLSRMIPATGPRTAGVRALELIDGAPRGLGQGRRERMRLIKLAD"
     gene            1090..>2300
                     /locus_tag="VFN38_16320"
     CDS             1090..>2300
                     /locus_tag="VFN38_16320"
                     /inference="COORDINATES: protein motif:HMM:NF015168.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HET9013391.1"
                     /translation="MANHLATETSPYLLQHAHNPVDWRPWGDDALSLARTEQRPILLS
                     IGYAACHWCHVMERESFEDVATAALMNQHFVCIKVDREERPDLDAIYMQATQAMTGHG
                     GWPMTVFLTPQGEPFYAGTYFPPEDRQGMPSFRRVLQGVADAWANRQDSVTKTTASMR
                     DLYAASTERTRATGVLDEALLSRAMSSLVQRYEPRFGGFDGAPKFPPTMTLDFLLRQW
                     ARTGEANALEMVTHTIRCMVRGGIYDQVGGGFARYSVDAYWLVPHFEKMLYDNALLVR
                     LGANLWQATRDPEFRRMTEETVGWLSREMTSPEGGFYSSLDADSEGHEGRYYVWDSNE
                     LDALLGEDAPLVKAYWGVTTGGNFEGRNILHVPRDAAEVAAEQQVTVPELRTAVDRAA
                     RILYDARERRVR"
BASE COUNT          363 a          789 c          837 g          311 t
ORIGIN      
        1 ctgtcggcga gcttgatgag ccgcatgcgc tcgcgtcgac cctggcccag gccgcgcggt
       61 gcgccgtcga tcagctcgag cgcgcgcacg ccggccgttc tcggccccgt cgccggaatc
      121 atcctggaga gatcgcccgg aagggtctcg atcagcaccg gctcgttccc ggggaccgcg
      181 ctcgccaggc gcagcgcgtc ctcgtcgatg tcgcgcagcg tcgcgttgaa gatgccgcgg
      241 tacatccggt cggcatccag cacgttcacg tgctcgccct tccacaccac ctcgatcgcc
      301 ggcaggagcg acacgccctg ccccgccagc acggggttgt tggaccagcc gtcgcgcgcg
      361 ccttcgaacg tgcggtggtc cgacacgtac gccgccgcga agccggcgtc acggtgccag
      421 tcgcgcacgt cctccggcgt ccagtcgggg cggccgtcgt gcgaatagcg cgtgtgcgcg
      481 tggaaatcga tcgcgacgat ctccggcccg acctcgagcg ccgccatggg cctcggcagc
      541 agcgcgccgc cgaagtacac ggccacgagc gccagcaccg cgagcccgat gcgtgcggcg
      601 acccgcgccg cgcgccgcgc gggggacacc gatggcggca tcacgcgccc gcggagcccc
      661 caccagagca ggtaggcgag aaggagggtg agcagcagcg ccacgtgctg ccgcacgctg
      721 agcagggtga gcagatccag gacgtccgac acgggcgcca tcacgagata gcccgcggga
      781 cgccgcagcg tggcctcggc gacctgatcc agcgtgatcg cgtcccggat gggcgggatg
      841 gcgaagggtg cgctgcccag gatcaggatg gcgagcgcga gaaggctcca ccacgggcgg
      901 aggggacgca aacggccgag tgagctgtcg gcgaccgtgc ggatcgtgcg ggcgcgggga
      961 gcggcgtcgc gaggcaccag gctactcttg agtggaatga agttcgcgcg gaaggtcgct
     1021 cccgcgcgca aaaaacatag tcgcccgtcc gggcgtctgc attctccgac tcgagcccga
     1081 agcaccgccg tggccaacca cctcgccacc gagaccagcc cgtatctcct gcagcacgcc
     1141 cacaatccgg tcgattggcg gccgtggggc gacgatgcgc tgtcgctcgc gcgcaccgag
     1201 cagcgtccga tcctcctgag catcgggtac gcggcgtgtc actggtgcca cgtcatggag
     1261 cgtgagtcgt tcgaggatgt ggcgaccgcc gcgctgatga accagcactt cgtgtgcatc
     1321 aaggtggacc gcgaggagcg gcccgacctc gacgccatct acatgcaggc gacccaggcc
     1381 atgacggggc acggcggctg gccgatgacc gtcttcctca cgccgcaggg ggagcccttc
     1441 tacgccggca cctactttcc gcccgaggat cgccagggca tgccgagctt ccggcgcgtg
     1501 ctccagggcg tggcggacgc gtgggcgaac cggcaggaca gcgtcaccaa gaccaccgcc
     1561 tcgatgcgcg acctctacgc ggccagcacg gagcggacgc gcgccaccgg cgtgctggac
     1621 gaggcgctgc tgtcgcgggc gatgtcgtcg ctcgtgcagc gatacgagcc gcgcttcggc
     1681 ggcttcgacg gcgcgccgaa gtttccgccg acgatgacgc tcgacttcct gctccgacag
     1741 tgggcgcgca ccggcgaggc gaacgcgctg gagatggtga cgcacaccat ccgatgcatg
     1801 gtgcgcggag ggatctacga ccaggtggga ggcggcttcg cgcgctacag cgtggatgcg
     1861 tactggctgg tgccgcactt cgagaagatg ttgtacgaca acgcgctgct cgtgcggctc
     1921 ggcgccaacc tctggcaggc gacgcgcgat ccggagttcc gtcgcatgac cgaggagacg
     1981 gtcggctggc tctcgcgcga gatgacgtct ccggaggggg ggttctactc gtcgctcgac
     2041 gccgacagcg aggggcacga aggccgctac tacgtgtggg actcgaacga gctcgatgcg
     2101 ctgctcggcg aggatgcgcc gctcgtgaag gcctactggg gggtgaccac gggcggcaac
     2161 ttcgaggggc ggaacatcct gcacgtgccg cgcgacgcgg cggaggtcgc ggcggagcag
     2221 caggtgacgg tgcccgagct gcgcacggcg gtcgaccgcg cggcgcgcat cctgtacgac
     2281 gcgcgcgagc gacgggtgcg
//
LOCUS       DASSYW010001032         3496 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1539971, whole genome shotgun sequence.
ACCESSION   DASSYW010001032 DASSYW010000000
VERSION     DASSYW010001032.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3496)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3496)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3496
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1539971"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..822
                     /locus_tag="VFN38_16325"
     CDS             <1..822
                     /locus_tag="VFN38_16325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013392.1"
                     /translation="AGAAWDDFVSFARGVQRSPEVADLFARELAQLRERIASAVERPG
                     LAPVSEEYIVVRISALRAGGRAASPSEALTDERLAVLLLGEQRPLAEQARAGLLANRF
                     SYYADDLAVLTWDNALVAEPQSNDRDVEYILEFANAQLLELRVYDALLDAELPAMYDR
                     IASARRRQLPMPTRRFQSVLSGLQARVADVTETVERAENALKVTDDVYLARVYGAALE
                     LFRATAWRRGIERKLEIFRETYAMLNGEAQSARSELLEFAIIVLIVAELVVGIAR"
     gene            complement(859..2580)
                     /locus_tag="VFN38_16330"
     CDS             complement(859..2580)
                     /locus_tag="VFN38_16330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013393.1"
                     /translation="MPPSPSRLLLVAAICCAGASAHAQQAPAPAPACDGLRVSRIDIQ
                     PDRPPFTGQASRWRHFARAVGLHHATTREGVVKAFLALAVGEPCTEVRRAETERVLRA
                     QPFLADATVAATPDRAGGVVVSVRTVDEIPVLVNARFRGIAPRAFSLGNENVGGLGLL
                     AEASIERGYAYRTGYGVRLTEYATFGRPYVASLDADRQNLGHRLAVQLEHPFYTDLQH
                     IGWHVGYLTSNEYPGIRRPARDELALGVRQDRWEGSTISRVFGTSTVGLIGVAASGLK
                     LTPQVRGIVVSDTGLATDTGTTLLNRYAPFKTTRAGVLGGIRRVRFRTVRGFDGLTAQ
                     QDLPNGAFAGLQVAKGLPSFGESDLFLSGVAYAGGGGAHVDYAGLGQVEGRRGTGLNY
                     WDSVIGSGRGALYMGRGPGWVVIAEDQYSGGSRSLLPLQLALGDRQGGILGYRESSLA
                     GAQRNVVRTELRWSGAALVRNADVGFATFSQVGTIWAGDAPYGQSATRTTVGISVLAA
                     YPTGSKRLYRADLGIPLTRRGEGSGKIEVRFTSEDRTQLFWREPDDVSRARTGAVPTS
                     LFAFPTR"
     gene            complement(2580..>3496)
                     /locus_tag="VFN38_16335"
     CDS             complement(2580..>3496)
                     /locus_tag="VFN38_16335"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HET9013394.1"
                     /translation="RHVPEMSDSTKDSSDARAALDSISDAASAKRAARSPLAAELVRF
                     QQHHQLPATGRLDKETVAALNITPAQRAEQLAANMERHRWLPRTLGSRYIYVNVPSFR
                     LDAYDSGQKALSMKVVVGSEYQGRTTPTFSDSMEVAVFRPYWNITPDIQRLEVGPKAA
                     NNPGYLERENMEYYKDGGVTRIRQRPGGKNALGLVKFLFPNDFNIYLHDTPAKALFAQ
                     DDRAASHGCIRLEKPAELAQWVLGWDAARVQQAMNEGSDNHAVKLPQRIPVYIVYFTA
                     YLRDGELVFADDLYGRDDALEKQITHAT"
BASE COUNT          485 a         1212 c         1262 g          537 t
ORIGIN      
        1 gccggcgcgg cgtgggacga cttcgtgagc ttcgcccggg gcgtgcagcg ctcgcccgaa
       61 gtggccgacc tcttcgcgcg cgagctcgcg cagcttcgcg agcgcatcgc ctccgccgtg
      121 gaacgtccgg ggctggcgcc cgtgagcgag gagtacatcg tcgtccgcat ctcggcgctc
      181 cgggcgggcg ggcgggcggc gtcgcccagc gaggcgctca ccgatgagcg gctcgccgtg
      241 ctgctcctgg gcgagcagcg accgctcgcc gagcaggcgc gcgccggcct gctcgcgaac
      301 cggttctcgt actacgccga cgacctcgcg gtgctgacgt gggacaatgc cctcgtcgcg
      361 gagccgcagt cgaacgatcg cgacgtggag tacatcctcg agttcgcgaa cgcgcagctc
      421 ctggagctcc gcgtctacga cgcgctgctc gacgccgagc tgccggcgat gtacgaccgc
      481 atcgcgtcgg cgcggcgccg gcagctcccc atgccgacgc ggcggttcca gtccgtgctg
      541 tccggcctcc aggcgcgcgt ggcggacgtg acggagacgg tggagcgcgc cgagaacgcg
      601 ctcaaggtca ccgacgacgt ctacctggcg cgcgtgtacg gtgcggcgct ggagctcttc
      661 cgcgccacgg cgtggcgacg cggcatcgag cggaagctgg agatcttccg cgagacgtac
      721 gcgatgctga acggcgaggc gcagtcggcg cgaagcgagc tgctggagtt cgcgatcatc
      781 gtgctgatcg tggcggagct cgtggtgggg atcgcgcggt gaggccgtga ggccgtgaag
      841 ccgtgaagcc gtgaagcgct accgcgtcgg aaacgcgaac agtgacgtcg gcacggctcc
      901 cgtgcgcgca cgcgagacgt cgtcgggctc gcgccagaag agctgcgtgc ggtcttcgct
      961 cgtgaagcgc acctcgatct tgccgctccc ctcgccgcgc cgcgtgaggg ggatgccgag
     1021 gtccgcgcgg tagagtcgct tggacccggt gggataggcg gcgagcacgc tgatgccgac
     1081 cgtcgtgcgc gtggcgctct ggccatacgg cgcatcgccc gcccagatgg tccccacctg
     1141 gctgaacgtc gcgaagccga cgtcggcgtt gcgcacgagc gccgcaccgg accatcgcag
     1201 ctcggtgcgc acgacgttgc gctgcgcgcc ggccagcgac gattcccggt agcccaggat
     1261 tcctccctgc cggtcgccga gggcgagctg gagcgggagc agcgagcgcg aaccgccgga
     1321 atactggtcc tccgcgatca ccacccagcc cggtccgcgc cccatgtaca atgcgccgcg
     1381 tccgctgccg atcacgctgt cccagtagtt gagccccgtg ccgcggcgtc cctcgacctg
     1441 gccgagcccc gcgtagtcca cgtgggcccc cccgccaccg gcgtaggcga cgcccgagag
     1501 aaagaggtcg ctctcgccga agctcggcag tcccttggcc acctgaaggc cggcgaacgc
     1561 accgttgggg aggtcctgct gggcggtcag tccgtcgaac ccgcgcaccg tgcgaaagcg
     1621 gacgcgccgg atgccgccca gcacgccggc gcgcgtcgtc ttgaacggtg cgtacctgtt
     1681 caggagtgta gtgcccgtgt cggtggcgag ccccgtgtcc gacaccacga tgccgcgcac
     1741 ctgcggcgtg agcttcagcc cggacgccgc gacgccgatc agccccaccg tgctggtgcc
     1801 gaacacgcgg ctgatcgtgc tcccctccca gcgatcctgc cgcacgccga gtgcgagctc
     1861 gtcgcgcgcc ggacgacgaa tgccggggta ttcgttgctg gtgaggtagc cgacgtgcca
     1921 gccgatgtgc tggagatcgg tgtagaaggg atgctcgagc tgtacggcga gccgatgtcc
     1981 caggttctgc cggtcggcgt cgaggctggc cacgtacggc cggccaaacg tcgcgtattc
     2041 ggtgagccgc actccgtacc ccgtgcgata cgcatagccg cgctcgatgc tcgcctcggc
     2101 cagcaggccc agtccgccca cgttctcgtt gccgagggag aaggcgcggg gggcgatgcc
     2161 gcgaaagcgc gcattcacca gcaccgggat ctcgtccacc gtgcggaccg acaccacgac
     2221 gcctccggcg cgatccgggg tggcggccac ggtggcgtcg gcgaggaagg gctgcgctcg
     2281 cagcacgcgc tccgtctccg cgcggcgcac ctcggtgcac ggctctccca cggcgagcgc
     2341 gaggaaggcc ttcacgacgc cttcacgcgt cgtggcgtga tgcagcccga cggcgcgtgc
     2401 aaagtggcgc caccgggatg cctgtccggt gaagggaggg cgatcgggtt ggatgtcgat
     2461 gcgcgacacg cgcaggccgt cgcacgccgg cgcgggtgcg ggcgcctgct gcgcgtgcgc
     2521 cgaagcgcca gcgcagcaga tcgcagccac cagcagcagc cgggacgggg aagggggcat
     2581 caggtcgcgt gcgtaatctg cttctccagc gcgtcgtcgc gaccgtacag gtcgtcggcg
     2641 aacacgagct ctccgtcgcg aaggtacgcg gtgaagtaca cgatgtacac cgggatcctc
     2701 tgcggcagct tcaccgcgtg gttgtccgac ccctcgttca tcgcctgctg gacccgtgcg
     2761 gcgtcccagc cgagcaccca ctgcgccagc tcggcgggct tctccagccg gatgcagccg
     2821 tggctcgccg cgcggtcgtc ctgcgcgaac agcgccttgg ccggcgtgtc gtgcaggtag
     2881 atgttgaagt cgttcgggaa gaggaacttc acgaggccca gcgcgttctt gccacccggc
     2941 cgctgccgga tgcgcgtcac gccgccgtcc ttgtagtact ccatgttctc gcgctcgagg
     3001 tagcccgggt tgttcgccgc cttgggcccc acctcgaggc gctggatgtc gggggtgatg
     3061 ttccagtacg ggcggaacac cgccacttcc atcgagtcgc tgaacgtggg cgtcgtgcgt
     3121 ccctggtatt ccgacccgac gacgaccttc atgctcagcg ccttctgtcc gctgtcgtac
     3181 gcgtcgagcc ggaaggaggg gacgttcacg tagatgtacc gcgagccgag cgtgcgcggc
     3241 agccagcgat gccgttccat gttggccgcg agctgttcgg cgcgctgcgc gggggtgatg
     3301 ttcagcgccg cgaccgtctc cttgtcgagc cgtccggtgg cggggagctg gtgatgctgc
     3361 tggaagcgca cgagctccgc ggcgagcggg gatcgcgccg cgcgcttcgc gctggccgcg
     3421 tcgctgatgc tgtcgagcgc cgcgcgcgcg tcggaactgt ccttcgtgga gtcggacatc
     3481 tccggcacgt gacgcg
//
LOCUS       DASSYW010001033         2042 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1781204, whole genome shotgun sequence.
ACCESSION   DASSYW010001033 DASSYW010000000
VERSION     DASSYW010001033.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2042)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2042)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2042
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1781204"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..524
                     /locus_tag="VFN38_16340"
     CDS             <1..524
                     /locus_tag="VFN38_16340"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HET9013395.1"
                     /translation="LSVDALRGLVTELRPAALDELGTTPAVRALIDRTAAAAGLEIEL
                     DLDLAYEQGRTDTRHSPELESTLYRLVQEALSNIVKHAGATHVTVALTEDDTTVRLSV
                     TDDGAGFHADAATEGFGLIGMRERVALLAGELDLDSRPGAGTTVTARIPIQRRPSEPS
                     ARTPDRQLGRRTA"
     gene            609..890
                     /locus_tag="VFN38_16345"
     CDS             609..890
                     /locus_tag="VFN38_16345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010888345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5661 family protein"
                     /protein_id="HET9013396.1"
                     /translation="MTDQQVHFTADDAREIGASIGIDWDASRFDVEQFRVGLNVELEH
                     GRRDPETNVTDDDRTITGKITRAHLNEFPDYYTRLAKMETEAEEYWRSR"
     gene            1096..1698
                     /locus_tag="VFN38_16350"
     CDS             1096..1698
                     /locus_tag="VFN38_16350"
                     /inference="COORDINATES: protein motif:HMM:NF015674.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF308 domain-containing protein"
                     /protein_id="HET9013397.1"
                     /translation="MRIQISNEGVGDSAYTIREVRDAGHDLARFWWVWLAAGIAWVVA
                     PLVVLQFDGASVATVGLIVGIMFAMASAQQFVLAAVADSLQWLWATFGVLYGASAIIC
                     FVNPQNTFVALADILGFLFLCVGVWWTIRAFLLKAADSTWWLDLVAGVLMLAMAFWTS
                     GQFFIEKAYTLLVFAGIWALMHGVTDIVRAFRLRGLRDSI"
     gene            1704..>2042
                     /locus_tag="VFN38_16355"
     CDS             1704..>2042
                     /locus_tag="VFN38_16355"
                     /inference="COORDINATES: protein motif:HMM:NF015953.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HET9013398.1"
                     /translation="MAAEPAPAWKPENPRVHPIRVLVAWVISALALLLAAGIVPGAEV
                     RGVGGAIVVAALVAVVNAIIPPILAALRLPFTIGIGFIAVLAADAAALLIAADAAPNE
                     LYVDGFASALG"
BASE COUNT          298 a          709 c          702 g          333 t
ORIGIN      
        1 agctcagcgt cgacgcgctg cgcggcctcg tcaccgagct gcggcccgca gcgctcgacg
       61 agctcggcac cacccccgcc gtgcgcgcgc tcatcgatcg gaccgccgcc gcggccgggc
      121 tcgagatcga gctcgacctc gatctggcct atgaacaggg ccgaacggac acgcgacact
      181 cacccgagct ggagagcacc ctctaccggc tcgtgcaaga ggcgctgagc aacatcgtca
      241 agcacgccgg cgccacccac gtgacggtcg cgctgaccga ggacgacacg accgtccggc
      301 tcagcgtcac cgacgacggc gccggcttcc acgccgacgc cgccaccgag ggattcgggc
      361 tgatcggcat gcgtgagcgc gtcgcgctgc ttgccggcga gctggatctc gactcgcggc
      421 ccggcgccgg aaccaccgtc accgcccgga tacccatcca gcggcgcccg tccgaaccct
      481 cggcacgaac acccgatcgc caactcggtc gccgcacggc gtgacgctcg agcggtgccg
      541 gatgcggtgg gttgtcgacg atcgtcgccg agtgaaacgc tggtctcctc aacggatagg
      601 agcacgacgt gactgatcag caagtccact tcactgctga cgacgcccgc gagatcggtg
      661 cgtcgatcgg catcgactgg gatgcctcac ggttcgacgt cgagcagttc cgcgtcggtc
      721 tgaacgtgga gctcgagcac gggcggcggg atcccgagac caacgtcacc gacgacgacc
      781 gcaccatcac ggggaagatc acccgggcgc acctcaacga gttccccgac tactacacgc
      841 gcctggcgaa gatggagacc gaagccgagg agtactggcg ctcgaggtag tcagcgggca
      901 gcagcaccgg tcgcgtgtcg ccgccgagtc gtggtcgttg gagcgtgtcg aggggatcgg
      961 gtcccctggg aaatgggtgg taatccgcga cgtagcgccg aaagccacgg atgacagcga
     1021 tcaggtggag cgcgacgatc gtcttgaccg caacgtacgg cggtcggtcc tggccctctc
     1081 cgatcggagg ctctcatgcg aatccagatc tcgaacgagg gcgtcggcga ctccgcgtac
     1141 acgatccgtg aagtgcgcga tgccggtcac gacctcgcac gcttctggtg ggtgtggctc
     1201 gcggccggca tcgcgtgggt cgtcgcgccg ctggtcgtcc tgcagttcga cggcgcgtcc
     1261 gtcgccacgg tgggcttgat cgtcgggatc atgttcgcga tggcgtccgc gcagcagttc
     1321 gtgctggcgg ccgtcgcgga cagcctgcag tggctgtggg cgaccttcgg cgtgctctac
     1381 ggcgcgtcgg cgatcatctg cttcgtcaac ccgcagaaca ccttcgtggc gctcgccgac
     1441 atcctcgggt tcctgttcct gtgcgtgggc gtgtggtgga cgatccgtgc gttcctgctc
     1501 aaggcggccg attccacgtg gtggctcgac ctggtcgccg gggtgctgat gctggccatg
     1561 gcgttctgga cgagcggcca gttcttcatc gagaaggcct acacgctgct cgtgttcgcc
     1621 ggcatctggg cgctgatgca cggtgtgacc gacatcgtgc gggccttccg cctgcgcggc
     1681 ctgcgcgaca gtatctaggg ctcatggcgg ccgagcccgc accggcgtgg aagccggaga
     1741 accctcgcgt ccacccgatc cgggtgctcg tggcgtgggt gatctccgcg ctcgcgctcc
     1801 tgctcgcggc cgggatcgtc cccggcgcgg aggtccgcgg cgtcggcggc gcgatcgtcg
     1861 tcgccgcgct cgtcgcggtc gtcaacgcga tcatcccgcc gatcctcgcg gcgctccggc
     1921 tgccgttcac gatcggcatc ggcttcatcg ccgtgctggc ggccgatgcc gccgcgctgc
     1981 tgatcgcggc cgacgcggcg ccgaacgagc tctacgtcga cggattcgcc tccgcgctgg
     2041 gc
//
LOCUS       DASSYW010001034         3689 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_950602, whole genome shotgun sequence.
ACCESSION   DASSYW010001034 DASSYW010000000
VERSION     DASSYW010001034.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3689)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3689)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3689
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_950602"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..762
                     /locus_tag="VFN38_16360"
     CDS             <1..762
                     /locus_tag="VFN38_16360"
                     /inference="COORDINATES: protein motif:HMM:NF015213.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0033573 - high-affinity iron permease
                     complex [Evidence IEA];
                     GO_function: GO:0005381 - iron ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0034755 - iron ion transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FTR1 family protein"
                     /protein_id="HET9013399.1"
                     /translation="VVLKTLLGAVPASREFIEGATLLVAVAVLFSVSYWLISKVEAAK
                     WQQFIREKVTTALDHGGGRALAFVAFLAVYREGAETALFYQALFNEGPNVALPLSLGI
                     AAGGVALAVIFTLFYRFGVRIPLRPFFSVTSVLLYYMAFVFTGKGIRELQEGNIIPLS
                     AIRGFPHVEALGLYPSWQGVLSQLALVLLFAFAVLKTFWPKRSVTLPTVEPSAVVVAP
                     VVATQELAAIRRENEELRRRLTALEEALGREPAES"
     gene            794..1741
                     /locus_tag="VFN38_16365"
     CDS             794..1741
                     /locus_tag="VFN38_16365"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HET9013400.1"
                     /translation="MSRRRRSANPDELASERRDATADRRDDRARRKLEMVLDRLFRPM
                     RWAARAAWTLGLQSARPVGSVRESVVVPRPSGARALRIAFASDFHGGATTDERVLRAA
                     CAAIDALEPDVLLLGGDFVSVRANDIHALAPLLAAIRAPLGKFGVFGNHDLRANRPVV
                     ADALRTAGVRMLVNETVRLSAPHDDVTIVGFDDPIRGAPDGELLAGVDGVRVLLMHAP
                     DGLLAAGDEAFDLALCGHTHGGQIVMPGGVMPYLPHGELSRTYPVGRFDLHASAPRTL
                     IVSRGVGCSTVPIRVLCGAEVHLVTLSPASVGEPDAGTQ"
     gene            1906..2103
                     /locus_tag="VFN38_16370"
     CDS             1906..2103
                     /locus_tag="VFN38_16370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013401.1"
                     /translation="MRTLDDVQRALRARVGSDDAMKLVTTRVFLRTGVNLKQVRPEQN
                     DNAAVVTKVMGALAAVGHSLT"
     gene            2114..3304
                     /locus_tag="VFN38_16375"
     CDS             2114..3304
                     /locus_tag="VFN38_16375"
                     /inference="COORDINATES: protein motif:HMM:NF020084.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FIST N-terminal domain-containing protein"
                     /protein_id="HET9013402.1"
                     /translation="MPTKHTNPQSPLRPSAAGAGRPASAHSHKSDTRAAAADLVAQFD
                     RQLQGASATAIVAFWSPAHDGPQLIAALRERYPSAQVLGCTTAGEFNERDGSVGGISA
                     IALPAGTVRAAHAELAPFERGIEKGVRLAAEKLAVLVGADLKSLDPARYVGLVLFDGL
                     NMSEEAANEALGDVAPQLVFVGGSAGDDLAFKETRVFLNGKSTTNGAALLLLDMAVPF
                     TIAKTCSFAPTAYKFTITRADERKRVVYELDGRPALEVYAKAAGTTPDKLDGTVFMAN
                     PVGMMLDGDPWIRSPQMATPDGGLKFYCGITEGSEVHLMRGTDLVGETKQAMVRAAKE
                     VGGRASGAIAFNCILRRLEMDATKAHEGFRDAFAGVAAAGFHTYGETYIGHINQTCTA
                     LVFA"
     gene            3427..>3689
                     /locus_tag="VFN38_16380"
     CDS             3427..>3689
                     /locus_tag="VFN38_16380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013403.1"
                     /translation="MFVAAWSRSRTAARALSELDERADALRAERERLRGALESLVVAI
                     PEELRDLDAAIAASHSGNGSRSAARAQRGELARAQLALVSRGS"
BASE COUNT          514 a         1304 c         1309 g          562 t
ORIGIN      
        1 gtggtgctca agacgctgct cggcgcggtg ccggcgagcc gcgagttcat cgagggcgcc
       61 acgctgctcg tggcagtcgc cgtgctgttc tcggtgagct actggctcat ctcgaaggtg
      121 gaagcggcca agtggcagca gttcatccgc gagaaggtca cgacggcgct ggatcacggg
      181 ggcggccgtg cgctcgcctt cgtcgccttc ctcgccgtgt atcgcgaggg cgccgagacg
      241 gcgctcttct accaggcgct gttcaacgaa gggccgaacg tcgcgctgcc gctgtcgctc
      301 ggcatcgccg ccggcggcgt ggcgctcgcc gtcatcttca cgctcttcta tcgcttcggc
      361 gtgcgcatcc cgctgcgtcc cttcttctcg gtgacgagcg tcctgctgta ctacatggcg
      421 ttcgtgttca cggggaaggg catccgcgag ctgcaggaag ggaacatcat tcccctctcg
      481 gccatccggg gcttcccgca cgtggaggcg ctcggcctgt atccgagctg gcagggggtg
      541 ctgtcgcagc tcgcgctggt gctgctgttc gccttcgccg tgctgaagac cttctggccg
      601 aagcgctcgg tcacgctgcc gacggtggag ccctcggcgg tcgtcgtcgc ccccgtcgtc
      661 gcgacgcagg agctcgcggc gatccggcgc gagaacgagg agctgcggcg gcgcctgacg
      721 gcgctcgagg aagcgctggg ccgggagccg gcggaaagct gacagcgcga cgtcgccgtt
      781 cactcaccgg tccatgagca gacggcgacg gtcggcgaat ccggacgagc tggcgagcga
      841 gcggcgcgac gcgaccgcgg accgtcgcga cgatcgcgcg cggcggaagc tcgagatggt
      901 gctcgaccgt ctcttccgcc ccatgcgctg ggcggcgcgc gcggcctgga cgctggggct
      961 gcagtcggcc cggccggtgg gcagcgtccg cgagtccgtc gtcgtgccgc gcccctcggg
     1021 cgcgcgggca ctgcggatcg ccttcgcgtc cgacttccat gggggcgcga cgaccgacga
     1081 gcgcgtgctc cgcgcggcgt gcgccgccat cgacgcgctc gagcccgacg tgctgctcct
     1141 cggcggtgac ttcgtgagcg tgcgcgccaa cgacatccat gcgctggcgc cgctccttgc
     1201 cgcgatccgc gcgccgctgg gcaagttcgg cgtgttcggc aaccacgacc tccgcgccaa
     1261 ccgtccggtg gtcgccgacg cgctgcgcac cgccggcgtg cgcatgctcg tgaacgagac
     1321 tgttcgactg tcggcccctc acgacgacgt gacgatcgtc ggcttcgacg acccgattcg
     1381 cggcgcaccg gacggcgagc tgctcgcggg cgtggacggc gtacgcgtgc tgctcatgca
     1441 cgccccggac ggcctcctcg ccgccggtga cgaggcgttc gatctcgcgc tctgcggcca
     1501 cacgcatggc ggccagatcg tgatgcccgg cggggtgatg ccgtacctgc cgcacggtga
     1561 gctgtcgcgc acctatcccg tcggccggtt cgatctccac gcatcggcac cgcgtacact
     1621 gatcgtgagt cgcggggtgg gatgcagcac cgtgccgatc cgcgtgctct gcggcgccga
     1681 ggtgcacctc gtcacactgt ccccggcctc cgtcggggag cccgatgcgg ggacgcaatg
     1741 accgttatcg cgcggcatcg gcggtcagaa attcatgaac ggaatttcac gcgacgaatg
     1801 atttgtttgc ggtgactgcg tcatgccggg cgcgtcatac tggggcaggc gaggcgacgc
     1861 cgatgtcgtc tcgcgatcat ttcgcttcag cccgaggaac cgcctttgcg aacccttgac
     1921 gacgtccagc gcgcgctccg tgcgcgcgtg ggcagcgacg acgcgatgaa gctcgtcacg
     1981 acgcgggtgt tcctccggac gggtgtgaac ctgaagcagg tccgtccgga acagaacgac
     2041 aacgccgccg tcgtcacgaa ggtgatgggc gcgctcgccg ccgtcggcca ctccctcacc
     2101 tgagccgccg ccaatgccta ccaagcacac caatccccag tcgccgctgc gaccctcggc
     2161 cgccggtgcc ggccgccccg ccagcgccca ctcgcacaag agcgacacgc gcgccgcggc
     2221 tgccgatctc gtcgcgcagt tcgaccgcca gctccagggc gcatcggcga cggccatcgt
     2281 cgcgttctgg tcgccggcgc acgacggccc tcagctcatc gcggcgctcc gcgagcggta
     2341 cccctcggcc caggtgctgg gctgcaccac cgccggcgag ttcaacgagc gtgacggctc
     2401 ggtcggcggc atttcggcca tcgccctgcc cgccggcacc gtgcgcgccg cgcacgccga
     2461 gctggcgccg ttcgagcgcg gcatcgagaa gggcgtccgc ctcgcggccg agaagctcgc
     2521 ggtgctcgtc ggcgcagacc tcaagtcgct cgatcccgcg cgctacgtgg ggctcgtgct
     2581 gttcgacggc ctcaacatga gcgaggaggc ggcgaacgag gcgctcggcg acgtcgcgcc
     2641 ccagctcgtg ttcgtcggcg gctcggccgg ggacgacctc gcgttcaagg agacgcgcgt
     2701 cttcctgaac gggaagagca cgacgaacgg cgcggccctg ctgctgctgg acatggcggt
     2761 gccgttcacg atcgccaaga cgtgcagctt cgcgcccacg gcgtacaagt tcacgatcac
     2821 gcgcgccgac gaacgcaagc gcgtggtgta cgagctcgat ggcaggcccg ccctcgaggt
     2881 gtacgcgaag gcggccggta ccacgccgga caagctcgac ggcacggtgt tcatggccaa
     2941 tcccgtgggc atgatgctcg acggagaccc gtggatccgc tcgccgcaga tggcgacgcc
     3001 cgacggcggc ctcaagttct actgcgggat caccgagggc tccgaggtcc acctcatgcg
     3061 gggcaccgat ctcgtggggg agacgaagca ggcgatggtg cgcgccgcga aggaagtggg
     3121 tggccgggca agcggtgcga tcgcgttcaa ctgcatcctg cgccggctgg agatggacgc
     3181 cacgaaggcg cacgaagggt ttcgcgacgc gttcgccggc gtcgcggccg cgggcttcca
     3241 cacctacggc gagacgtaca tcggccacat caaccagacc tgcacggcgc tggtgttcgc
     3301 gtagaacggc gaggcgcgga ccggggcacg gcgccccggt ccgcgtcgcg tatccacttc
     3361 cttcacccat gatcgatgag cgcagcatcc gctagcctgc tcggcgcgct cgctggaggc
     3421 gcgaccgtgt tcgtcgcggc gtggagccgc tcgaggacgg cggcacgcgc gctctccgag
     3481 ttggacgaac gggcggacgc gctgcgcgcc gagcgcgagc ggctgcgtgg cgcgctcgaa
     3541 tccctcgtcg tggcgatacc ggaggagctg cgcgacctgg acgctgcgat cgccgcctcg
     3601 cactccggca acggctccag atccgcggcg cgcgcacagc gcggcgagct ggcgcgcgcg
     3661 cagctcgccc tggtgagccg cggcagcga
//
LOCUS       DASSYW010001035         2431 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_950655, whole genome shotgun sequence.
ACCESSION   DASSYW010001035 DASSYW010000000
VERSION     DASSYW010001035.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2431)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2431)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2431
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_950655"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1324)
                     /locus_tag="VFN38_16385"
     CDS             complement(<1..1324)
                     /locus_tag="VFN38_16385"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HET9013404.1"
                     /translation="MPDELRSRLLAAVGARYEVSDEIGRGGMGVVYRARDVRLRRAVA
                     IKLLPPELAFRDEVRSRFLREAQTAAQLSHPNVVPIYSVDEVDGLVFFVMALVEGDSL
                     GTHLKREGRVSVEFARKVLRDVAEALGYAHGRAIIHRDIKPDNILMDRVTGRTLVSDF
                     GIARAAEGDSRLTATGVTVGTPAYMSPEQAIGERDIDGRSDLYSLGVVGYHMLTGELP
                     FSATNTPAMLMKHINQAPRPIRELRPDLPPGLERAIERAMAKQPDRRWADAAEFREAL
                     FDDSPRPADTRSAPPAVPVQGPPPNAAAWPPQPPATHRAVREVAPPAQSGPPAPVTQR
                     PPWLESQVETDGSRPPIPAWMPQSWRGVRQEWWELNRDQRRMLRRQWREQRRAVARGL
                     VLPPGFQPGQELPVEYRIRAFRAHIARVGTTAALLAGINMVTSPVVPWF"
     gene            complement(1363..>2431)
                     /locus_tag="VFN38_16390"
     CDS             complement(1363..>2431)
                     /locus_tag="VFN38_16390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013405.1"
                     /translation="APVSHEPNRYAGGGGLSRDARGLSTEPDYDSVTAEEVARWNDDR
                     VKVFRKKLAPFFAVSAVITVLAIFGVLNLMGVVGIWSVYLAYQYAKLWTDGFDWRDVF
                     KQRKDRLFFDVVAESIDDFRALFDKKKRSEVLERDRMRARTTNRRLFGESSGRPIATS
                     ELPAASLARVAAPYAAKVRDAGRHRDDILRLIETLPKREREQVDEVPATADALYRRIE
                     LLAVDLTELDRGFAADDGDKVEREIEQLEAAANPLDGRSEERIRRLSILRRKLISLRE
                     LKKKRESQSARFENCVLALENMRYDVLKLKTGGQSFQQVTLLAERAMSLAQEVDNAVY
                     VAEEMRKLGLHGSGVANRRTS"
BASE COUNT          376 a          851 c          799 g          405 t
ORIGIN      
        1 gaaaccaggg gaccacgggc gacgtgacca tgttgatgcc cgcgagcagc gcggcggtgg
       61 tcccaacgcg cgcgatgtgt gcccgaaacg cacgaatgcg atactcgaca ggaagctcct
      121 gcccgggctg aaacccgggc ggaagcacga gcccgcgcgc cacggcccgc cgctgctctc
      181 gccactgtcg gcggagcatg cgacgttgat cccgattcag ttcccaccac tcctgtcgaa
      241 cgccgcgcca cgactgaggc atccaggccg gtataggcgg cctcgacccg tccgtctcca
      301 cctgcgactc gagccacggc ggccgctgcg tcacgggagc tggcggcccg ctctgcgccg
      361 gcggcgcgac ctctctcacg gcgcggtggg ttgccggcgg ctgtggcggc caggctgccg
      421 cgttaggcgg cggcccctgc actggcacgg cgggcggagc cgatcgcgtg tcggcgggac
      481 gaggcgagtc gtcgaacagc gcctcgcgaa actccgccgc gtccgcccac cgacggtcgg
      541 gctgcttcgc catcgctcgc tcgatcgcgc gctcgaggcc gggcgggagg tcgggccgaa
      601 gctcccggat tggacgcggc gcctggttga tgtgcttcat gagcatcgcc ggcgtgttcg
      661 tcgccgagaa cggcagttcg ccggtgagca tgtgatagcc aacgacacct aacgagtaca
      721 ggtcgctccg cccatcgatg tcccgctcgc cgatcgcctg ctccgggctc atgtaggctg
      781 gtgtcccgac ggtgacgccc gtcgccgtca ggcgtgagtc gccttcggcg gcccgcgcga
      841 tcccgaagtc ggagacgagc gtccgtcccg tcacccggtc catcaggatg ttgtcgggct
      901 tgatgtcgcg atggatgatc gcgcgtccgt gcgcgtagcc gagtgcctcg gcgacatcgc
      961 gcagcacctt gcgcgcaaac tcgaccgata cgcgcccttc ccgcttgaga tgcgtcccga
     1021 ggctgtcccc ttcgacgagg gccatcacga aaaaaaccag cccatcgacc tcatcgacgc
     1081 tgtagatcgg cacgacgttc gggtggctga gctgcgcggc cgtctgtgcc tcacgcagaa
     1141 accgtgaccg cacctcgtcg cgaaatgcca gctcgggagg cagcagcttg atcgccaccg
     1201 cgcgacgcag cctaacgtcg cgggcgcggt agacgacacc catcccgcca cggccgatct
     1261 cgtcggagac ctcgtaccgc gcgccgaccg cggcaagcag gcgtgatcgc agctcgtcag
     1321 gcatggcgct ctgtcaccgc ggtggcgtgg cggcgcaccg cgtcacgacg tccgacggtt
     1381 cgcgactccc gagccgtgaa ggccgagctt gcgcatttcc tcggcgacgt acacggcgtt
     1441 gtcgacctcc tgggcgagcg acatcgcgcg ctcggccagc agcgtcactt gctggaagct
     1501 ctggccgccg gtcttcagct tcaggacgtc gtagcgcatg ttctcgagcg cgaggacgca
     1561 gttctcgaag cgggcgctct ggctctcgcg cttcttcttg agctcgcgaa gcgagatcag
     1621 cttcctgcgg agaatcgaga gccgtcggat gcgctcctcg ctgcggccat cgagcggatt
     1681 ggcggccgcc tcgagctgct cgatctcgcg ctcgaccttg tcgccgtcat cggcggcaaa
     1741 cccgcgatcg agctcggtga ggtcgaccgc gagcaactcg atcctgcggt agagcgcatc
     1801 ggcggtcgcg gggacctcgt cgacctgttc gcgctcgcgt ttcggcagcg tttcgatcag
     1861 gcgaaggatg tcatcacgat ggcgtccggc gtcgcgcacc ttcgctgcgt acggcgccgc
     1921 gacgcgcgcg aggctcgcgg cgggcagttc cgacgtcgca atcggtcgcc cggaggattc
     1981 accgaacaac cgtcggttcg tggtgcgcgc gcgcatccga tcgcgctcga gcacttccga
     2041 ccgtttcttc ttgtcgaaca gcgctcggaa atcgtcgatc gactcggcta ccacgtcgaa
     2101 gaacagtcgg tccttccgct gcttgaaaac gtcgcgccag tcgaacccat cggtccacag
     2161 cttcgcgtat tggtacgcga ggtacacgct ccagatcccg acgactccca tgagattgag
     2221 gacgccgaag atcgcgagca ccgtgatgac cgcactcacg gcgaagaacg gcgccagctt
     2281 cttccggaag accttcacgc ggtcgtcgtt ccagcgcgct acctcttcgg ctgtcaccga
     2341 gtcgtagtcg ggctccgtcg agagccctcg cgcatctcgc gacagtcccc cgccaccggc
     2401 gtatcgattg ggctcgtgcg acacgggggc a
//
LOCUS       DASSYW010001036         2040 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1429505, whole genome shotgun sequence.
ACCESSION   DASSYW010001036 DASSYW010000000
VERSION     DASSYW010001036.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2040)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2040)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2040
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1429505"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            292..1983
                     /locus_tag="VFN38_16395"
     CDS             292..1983
                     /locus_tag="VFN38_16395"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HET9013406.1"
                     /translation="MTVTPVANVPAELPLKLAPRPTGAAISAADLMTRLYVYADDSML
                     GREAGTIGNVKATDYIAAELRRMGLEPAGENGTYFQTVPMAPRALDAAATSLVIADGP
                     AAPATLALWSDYAPIPGGPFGDYSSARSFDGVRVIYGGRLGDETAAITPEQAKGKLVL
                     LASPPAGAAGPPAWQFWTRGGSARWKGAAGVAIATLDASPPGLVAYMQAPHTGLQQPS
                     DTAASTPAGIVVGSAVAARLLGAPLENARPGTLGRTLRGAIRFVAAPLATPARNVVAI
                     LRGSDPALRNEYVAIGAHNDHVGIARRAVDHDSLRAWNTVMRPEGAESEVTAAPTTAQ
                     AARITALLDSLRRIHPTPRLDSIANGADDDGSGTVSVLEIAEAMAAAKQRPRRSVLFV
                     WHTAEEKGLFGSRHFTESPTVPRDSIVAQLNIDMIGRGAPTDVPNGGPGYLQLIGSRR
                     LSTELGDIVEATNTREKLGFTFDYQYDADGHPANYYCRSDHYEYARFGIPIVFFSTGG
                     HRDYHVVTDEPQYIDYPHMARVATLVQDIALVVANLDHRVVVDKPKPDPYGHCQQ"
BASE COUNT          293 a          847 c          640 g          260 t
ORIGIN      
        1 tacgaatccg cggacggggc ggctcctcca cgtcaggaaa gtgtatgact ttcggcgggc
       61 tcctccgcgc cggcccgctc gccggaagat ttcagcgccg caccggcagc ccctcctcgc
      121 gcgcggcccc caccgccgag cgcacccgtg atctccccga cctctccgcg cttgccctct
      181 catcgcccgc tcgcgaccct cgccgtctgc tcggtcgccc tcgccgcctg cgccacgcgc
      241 cccccggcgt ccaccgccac gagcccgcag ccgtcgagta acgggagcag cgtgacagtc
      301 acgccggtcg cgaacgtccc cgccgagctc ccgctcaagc tcgccccgcg tcccaccggc
      361 gccgcgatca gcgccgcgga cctgatgacg cgactctacg tctacgccga cgactccatg
      421 ctggggcgtg aggccggcac gatcggcaac gtcaaggcga ccgactacat cgccgccgag
      481 ctgcgccgca tggggctaga gcccgccggc gagaacggca cctacttcca gaccgtgccg
      541 atggcgcccc gcgcgctcga tgccgcggcg acctcgctcg tcatcgccga cgggccggcc
      601 gcgccggcca cgctcgcgct ctggtcggac tacgcgccga tcccgggcgg cccgttcggc
      661 gactattcca gcgcgcgctc cttcgacggc gtccgcgtga tctacggcgg gcggctcggc
      721 gacgagaccg cggccatcac gccggagcag gcgaagggca agctcgtgct cctcgcctcc
      781 cctcccgccg gagccgccgg cccccccgcc tggcagttct ggacgcgcgg cggctcggcg
      841 cgctggaagg gcgccgcggg cgtcgcgatc gccacgctcg acgcctcccc gccgggcctc
      901 gtcgcctaca tgcaggcgcc gcacaccgga ctgcagcagc cctccgacac cgccgcctcg
      961 actccggccg gcatcgtcgt cggctcggcg gtcgccgccc gtctcctcgg cgcgcccctc
     1021 gagaacgccc ggccgggcac gctcggtcgc acgctgcgcg gcgccattcg attcgtcgcc
     1081 gctccgctgg cgactcccgc ccgcaacgtg gtcgccatcc tgcgcggcag cgacccggcg
     1141 ctccgcaacg agtacgtcgc catcggcgcg cacaacgatc acgtcggcat cgcccgccgc
     1201 gcggtcgacc acgactcgct gcgcgcctgg aacacggtca tgcgcccgga aggcgcggag
     1261 agcgaggtga cggccgcacc caccacggcg caggccgcgc ggatcacggc cctcctcgac
     1321 tccctccgcc gcatccaccc gacgccgcgc ctcgactcga tcgccaacgg cgccgacgac
     1381 gatggctccg gcacggtgag cgtgctcgag atcgcggagg cgatggccgc cgcgaagcag
     1441 cgcccccgcc gctcggtcct cttcgtctgg cacacggcgg aggagaaggg gctcttcggc
     1501 tcgcgccact tcaccgagtc gccgacggtg ccgcgcgatt cgatcgtcgc ccagctcaac
     1561 atcgacatga tcggccgcgg cgcccccacc gacgtcccga acggcggacc gggctacctg
     1621 cagctcatcg gctcccgccg cctctccacg gagctcggcg acatcgtcga ggcgacgaac
     1681 acccgcgaga agctgggctt caccttcgac taccagtacg acgccgacgg ccacccggcg
     1741 aactactact gccgcagcga ccactacgag tacgcgcgct tcggcatccc gatcgtcttc
     1801 ttctccacgg gcggccaccg cgactatcac gtagtgaccg acgagccgca gtacatcgac
     1861 tacccgcaca tggcgcgcgt cgcgacgctg gtccaggaca tcgccctcgt cgtcgccaac
     1921 ctcgaccacc gcgtcgtggt ggacaagccg aagccggacc cgtacggaca ctgccagcag
     1981 tagcgatcgc tgcacatcgg agcgtcgcgc cgaccagcag tgaacggtga acggtgaacg
//
LOCUS       DASSYW010001037         2189 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_254492, whole genome shotgun sequence.
ACCESSION   DASSYW010001037 DASSYW010000000
VERSION     DASSYW010001037.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2189)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2189)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2189
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_254492"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1427)
                     /locus_tag="VFN38_16400"
     CDS             complement(<1..1427)
                     /locus_tag="VFN38_16400"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HET9013407.1"
                     /translation="MEKHLTQQRRWLIEFGLLCLVPILLLGVFLQNTLEKNVESRAVG
                     NAREQARLVNDLGFRVPLSARTDLDGGLTREERAELDQGLTQIRKGSSVSRVIVRDRD
                     GRTVYSDDSSMIGRTASPSSGTRSALDGVITSKLETEARAGQVLKVFVPLSLGESQPA
                     AATELWLPYGPIAASIDRQAGRIKMVLGFGLFFLWLTLLVVVTQASARLRHQAQQKEE
                     QALSDPLTGLPNRAMFQDLVQTTMANAGRRKKVAAVMLMDLDRFKDVNDTLGHHNGDL
                     LLQRIGSRLDSVLRNTASVARLGGDEFAILLPDIADRQAVIPIVRRVLKVLEEPVVVG
                     GLALQVEASIGVAMFPEHGRTVDAVMRAADVAMYVTKEQRSGYEFYDEGQHEHRHDAG
                     RLALIGELRRAMDEAELVLHYQPKVDLRTGKAKGVEALARWHHPERGLLSPDEFIPLA
                     ERSNLLRPMTLYLIDTALRQANSWRS"
     gene            complement(1470..>2189)
                     /locus_tag="VFN38_16405"
     CDS             complement(1470..>2189)
                     /locus_tag="VFN38_16405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013408.1"
                     /translation="PILDGWKLLESTAIYRANGQNVLYGEDEDGFTIGQIMLLSKPLL
                     EKRVLSDERIDIYPGGREDIRTGQIDRRVLATLEYLAESGFRPTVSSLKGNHGLLTAS
                     GNVSEHSTGSAVDISAINGIPIVGHQERGGITEQTVRRLMLLQGTMQPHQIISLLPLG
                     ANTLSMADHDDHIHVGFRPLFGANSKLGKQTLAVLQPGQWDDLLTRLRQIDNPHVSTK
                     PSRYALPVHRHKRASGPHRGE"
BASE COUNT          307 a          720 c          805 g          357 t
ORIGIN      
        1 gagcgccacg agttcgcctg gcgcagcgcg gtgtcgatca ggtagagcgt catcgggcgc
       61 agcaggttgg agcgctcggc aagcgggatg aactcgtccg gcgagagcag gccgcgctcc
      121 gggtggtgcc agcgggcgag cgcctcgacg cccttcgcct tgccggtgcg gaggtcgacc
      181 ttgggctggt agtggagcac cagctccgcc tcgtccatcg cgcggcgcag ctcgccgatc
      241 agcgcgaggc ggccggcatc gtgacggtgc tcgtgctggc cctcgtcata gaactcgtag
      301 cccgagcgct gctccttggt cacgtacatc gccacgtcgg cggcgcgcat cacggcgtcc
      361 accgtgcggc cgtgctcggg gaacatcgcc acgccgatcg acgcctccac ctggagtgcg
      421 aggccgccga ccacgaccgg ctcctcgagc accttcagca cgcggcgcac gatcgggatc
      481 accgcctggc ggtcggcgat gtcgggcagc aggatcgcga actcgtcgcc gccgaggcgg
      541 gcgacggagg cggtgttgcg cagcacgctg tcaagccgcg agccgatccg ctggagcagc
      601 aggtcgccgt tgtggtggcc gagcgtgtcg ttcacgtcct tgaagcggtc gaggtccatc
      661 agcatcacgg cggcgacctt cttgcggcgc ccggcgttgg ccatcgtggt ctgcacgagg
      721 tcctggaaca tggcgcggtt cggaagcccg gtgagcgggt cggacagcgc ctgctcctcc
      781 ttctgctgcg cctggtggcg gagccgggcg gaggcctgcg tgaccaccac gaggagtgtg
      841 agccagagga agaagagacc gaagccgagc accatcttga tgcggcccgc ctgccggtcg
      901 atcgacgccg cgatcggccc gtacggcagc cacagctcgg tggcggcggc gggctggctc
      961 tcgccgagcg acagcggcac gaacaccttg agcacctggc cggcgcgggc ctccgtctcg
     1021 agcttcgagg tgatcacgcc gtcgagcgcg gagcgcgtgc ccgaggacgg gctcgccgtg
     1081 cggccgatca tgctgctgtc gtcggagtag accgtgcgcc cgtcgcggtc gcgcacgatc
     1141 acgcgggaga ccgagctgcc cttgcggatc tgcgtgaggc cctggtcgag ctccgcgcgc
     1201 tcctccctgg tgaggccgcc gtcgaggtcg gtgcgtgcgc tcagcggaac gcggaagccg
     1261 aggtcgttca ccagccgcgc ctgctcacgc gcgttcccca cggcccgtga ctcgacgttc
     1321 ttctcgagcg tgttctggag gaacaccccg aggaggagga tcgggaccag gcacagcagt
     1381 ccgaactcga tgagccaccg gcgctgttgg gtgaggtgct tttccacggt ttgtctacat
     1441 cgtcacgggg agagtggccc tttagagcgc tattcccccc tgtgcgggcc gctcgcgcgc
     1501 ttgtgccggt gaaccggcag ggcgtagcgc gacggcttgg tcgagacgtg cgggttgtcg
     1561 atctggcgca ggcgcgtgag gaggtcgtcc cactggcccg gctggagcac ggccagcgtc
     1621 tgcttgccga gcttcgagtt cgcgccgaac agcggccgga acccgacgtg gatgtggtcg
     1681 tcgtggtccg ccatcgagag cgtgttcgcg cccagcggca gcagcgagat gatctgatgc
     1741 ggctgcatcg ttccctgcag cagcatcagc cggcgcacgg tctgctcggt gatcccgccg
     1801 cgctcctggt ggcccacgat cgggatgccg ttgatcgcgg agatgtcgac ggcgctgccg
     1861 gtggagtgct cggacacgtt gcccgacgcc gtgagcagcc cgtggttgcc cttgagcgac
     1921 gacaccgtgg gccggaagcc cgactcggcg aggtactcga gagtggcgag cacgcgccgg
     1981 tcgatctggc cggtgcggat gtcctcgcgg ccgcccgggt agatgtcgat gcgctcgtcg
     2041 gagagcacgc gcttctcgag cagcggcttc gagagcagca tgatctggcc gatcgtgaag
     2101 ccgtcctcgt cctcgccgta gaggacgttc tggccgttgg cgcggtagat cgcggtggac
     2161 tcgagcagct tccagccgtc gaggatcgg
//
LOCUS       DASSYW010001038         2246 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1245159, whole genome shotgun sequence.
ACCESSION   DASSYW010001038 DASSYW010000000
VERSION     DASSYW010001038.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2246)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2246)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2246
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1245159"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            126..914
                     /locus_tag="VFN38_16410"
     CDS             126..914
                     /locus_tag="VFN38_16410"
                     /inference="COORDINATES: protein motif:HMM:NF019349.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HET9013409.1"
                     /translation="MPVSARRTPSPRSAPARSVAAASNDESLRLDHVTRAYQELRRII
                     VWGQLPPGSRVSERIVAERLKLSRTPVRSALHRLEQEGFVASYGVGRERRLIVAPLTM
                     HDGQEVFTIVGHLEGLAARTAAELPAPRRKALVLQLRAVNEALATQARKKGNATRFFD
                     LDIEFHRLYVEEVVGPRLLTLHRAIKPQSERYIRLYVSVLVDQIAASVREHEKIAASI
                     ARGDPDAAQKAVETNWRNAAERLTHVIAQHGERGSWHAWGSEAG"
     gene            1125..>2246
                     /locus_tag="VFN38_16415"
     CDS             1125..>2246
                     /locus_tag="VFN38_16415"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HET9013410.1"
                     /translation="MTFATIARLAGRVLVLGVAATPLRLPAQSPRIDERVVDSIVAAG
                     MQQERLVGVSVALVRGGRIELVKSYGTASLQPRMAVDTGTRFSIGSVTKEFVAALALL
                     LQEEGRLSVHDTLSKWYPGLTRSREITLLDLINHVSGYRDYYPLDYVDREMTKPTTAE
                     HIMRKYATGPLDFDPGTRWSYSNTGYTILGRVLERAGGKPLGVMLEERIFRPLGMRQT
                     VYEPAPAERRATGYLSWALGEMEPAPPEGRGWIGAPGGIWSTAADLARWDLALMQPGF
                     LSPASREVLFGERMLRDGTPTGYAGGLGVGQIAGRPAFQHGGATSGFSATNLFIPADT
                     AAVVILSNTDQNLSAAPLARLVSPPRATAAAAPANPPRRQ"
BASE COUNT          336 a          841 c          765 g          304 t
ORIGIN      
        1 ccgtggaggg acgccgggcg gcgaacatac gacgaattgc ggtataccac aatggtttac
       61 cgagctcgcc cgcagccagc cccgcgcctt gccactcccc cggagcgcgc ctaagctttg
      121 gccacatgcc cgtgtccgcc cgccgtaccc catctcccag gtccgcgccc gcccggtccg
      181 tcgcggccgc gtcgaatgac gagtcgctgc gcctggacca cgtaacgcgc gcctaccagg
      241 agctccgccg catcatcgtc tgggggcagc tccccccggg ctcgcgcgtc tcggagcgca
      301 tcgtcgccga gcgcctcaag ctgagccgca cgccggtgag gagcgcgctg caccggctcg
      361 agcaggaggg attcgtcgcc tcgtacggcg tcggccgcga gcggcggctc atcgtggcgc
      421 cgctcaccat gcacgacggc caggaggtgt tcaccatcgt cgggcacctc gaggggctgg
      481 ccgcgcgcac cgccgccgag ctcccggcgc cgcggcggaa ggccctcgtg ctccagctcc
      541 gcgccgtgaa cgaggcgctg gccacgcagg cccgcaagaa ggggaacgcc acccgcttct
      601 tcgacctcga catcgagttc caccggctgt acgtcgagga ggtcgtgggg ccgcggctgc
      661 tcaccctgca ccgggcgatc aagccgcaga gcgagcgtta catccggctc tacgtgagcg
      721 tgctggtgga ccagatcgcc gcctcggtgc gcgagcacga gaagatcgcc gccagcatcg
      781 cccgcggcga tccggacgcg gcacagaagg cggtggagac caactggcgg aacgccgccg
      841 aacgcctcac ccacgtgatc gcccagcacg gcgagcgcgg gagctggcac gcctggggaa
      901 gcgaagcagg ctgagtctcg gcgcgtcggg gggatccacg tagggcgtgg ggcgttctcc
      961 gcaatccgtt cggcgtgcta cggcgcttcc gcggtaaaac gccgaacggt ccacggcaaa
     1021 cggaatactc caaacgtgga tccactcgac tcgtccccgt agccgatacc gttcaacgca
     1081 accggctggc cagccactcc acccgaccct caccgaggca gaccatgacc ttcgccacca
     1141 tcgcgcgcct cgccggccgc gtcctcgtgc tcggcgtcgc ggcgacgccg ctccggctcc
     1201 cggcgcagtc tccccgcatc gacgagcgcg tcgtggacag catcgtcgcc gcggggatgc
     1261 agcaggagcg gctggtcgga gtctccgtcg cgctcgtgcg aggcgggcgc atcgagctcg
     1321 tgaagagcta cggcacggct tcgctccagc cgcggatggc ggtggacacc ggcacccgct
     1381 tctccatcgg ctcggtgacg aaggagttcg tcgccgccct cgcgctgctg ctccaggagg
     1441 agggcaggct ctcggtgcac gacaccctct cgaagtggta ccccgggctc acccgctcgc
     1501 gcgagatcac cctgctcgac ctcatcaacc acgtcagcgg atatcgcgac tactacccgc
     1561 tcgactacgt ggaccgcgag atgacgaagc cgacgacggc cgagcacatc atgcggaagt
     1621 acgccaccgg gccgctggac ttcgaccccg gtacccgatg gtcgtacagc aacacgggct
     1681 acacgatcct cggacgcgtg ctcgagcgcg ccggcggcaa gccgctcggc gtgatgctcg
     1741 aagagcgcat cttccgtccg ctcgggatgc ggcagacggt ctacgagccg gcgccggcgg
     1801 agcgccgcgc caccggctac ctgtcgtggg cgctcggcga gatggagccg gcgccgccgg
     1861 aggggcgcgg ctggatcggc gcgccgggcg ggatctggtc caccgcggcg gacctcgcgc
     1921 gctgggacct ggcgctgatg caacccggct tcctctcgcc ggcgtcgcgc gaggtcctgt
     1981 tcggcgagcg gatgctccgt gacggcactc cgaccggcta cgccggcggg ctcggcgtcg
     2041 gccagattgc cggccgtccg gcgttccagc atggcggggc gacgtcggga ttttccgcga
     2101 ccaacctgtt catccccgcc gacaccgcgg cggtggtgat cctctcgaac accgaccaga
     2161 acctctcggc ggcaccgctc gcccggctgg tgtcgccgcc gcgcgcgacg gcggccgccg
     2221 caccggcgaa cccgccgcgc cggcag
//
LOCUS       DASSYW010001039         2015 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_264783, whole genome shotgun sequence.
ACCESSION   DASSYW010001039 DASSYW010000000
VERSION     DASSYW010001039.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2015)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2015)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2015
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_264783"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..954)
                     /gene="guaA"
                     /locus_tag="VFN38_16420"
     CDS             complement(<1..954)
                     /gene="guaA"
                     /locus_tag="VFN38_16420"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003922 - GMP synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016462 - pyrophosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006177 - GMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HET9013411.1"
                     /translation="MTASSRILIIDYGSQYTQLIARRVREARVYSEIHPPTRTLQWIR
                     DWHPTGIILSGGPNSVYGENAPTADPALFDVAPVLGVCYGMQLIAQLQGGEVKRGSQR
                     QYGRDEIHPTRESVLFRGFAPSETTTVWMSHGDHVEQAPPGFRVTAAGPGNPVSAIEH
                     ETKPIYGVQFHPEVAHTPRGAELLANFLFEVCHATPSWTPGAFIEDEVAKIRQQVGDA
                     QVICGLSGGVDSSVAAALVHRAIGDQLTCVFVDTGLLRLHERTQVEQTMHRHMGIKLV
                     TVDASTQFLTALRGVSEPEAKRRAIGHTFIDVFEEATAKAGT"
     gene            complement(951..1460)
                     /locus_tag="VFN38_16425"
     CDS             complement(951..1460)
                     /locus_tag="VFN38_16425"
                     /inference="COORDINATES: protein motif:HMM:TIGR00040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YfcE family phosphodiesterase"
                     /protein_id="HET9013412.1"
                     /translation="MRVGLMADSHDRVPAIAEFVRMMQASGVSMLIHAGDYCSPFALR
                     PIEEASMSLAGVFGKNDGDQQGLRARATAGFGAELFESPHSFEVGGQRILVVHDIGDV
                     QPRSIESHSIVVHGFTHQQEMKTRGDTLIVNPGESCGWVFGTPRAAILDLTEKKVEFL
                     TLDAAHWRT"
     gene            complement(1460..>2015)
                     /locus_tag="VFN38_16430"
     CDS             complement(1460..>2015)
                     /locus_tag="VFN38_16430"
                     /inference="COORDINATES: protein motif:HMM:NF012500.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013413.1"
                     /translation="IGGGLGVSYDDEESADLQRFAHALVPRVLPTGLTLLMEPGRFVV
                     GNSGMLLTRVLYRKHSGGRDFLVTDAGMTELIRPSHYDAFHRIEPVGPPVGQMKADVV
                     GPVCESGDFLALDRDLPQAGPGDLLAVHDVGAYGYVMASNYNTRPRGAEVLVDGDRYA
                     VVTARETYDDLVRLEQDHPEWRKG"
BASE COUNT          296 a          727 c          675 g          317 t
ORIGIN      
        1 cgtgcccgcc ttcgccgtcg cctcctcgaa cacgtcgatg aaggtgtgcc cgatcgcgcg
       61 gcgcttcgcc tccggctcgg acacgccgcg cagcgcggtg aggaactgcg tggacgcgtc
      121 cacggtgacg agcttgatcc ccatgtggcg gtgcatcgtc tgctccacct gcgtgcgctc
      181 gtgcaggcgc agcaggcctg tgtcgacgaa cacgcaggtg agctggtcgc cgatggcgcg
      241 atgcaccagc gccgcggcca ccgagctgtc cacgccgccg gagagcccgc agatcacctg
      301 ggcatcgccg acctgctgac ggatcttcgc gacctcgtcc tcgatgaacg cgccgggcgt
      361 ccagctcggc gtcgcgtggc agacctcgaa caggaagttc gccagcagct cggcgccgcg
      421 cggcgtatgg gcaacttcag gatgaaactg taccccatag atcggcttcg tctcgtgctc
      481 gatcgccgac accggattgc ccggccccgc cgccgtgacg cgaaagcccg gcggcgcctg
      541 ctccacgtga tcgccgtggc tcatccacac cgtcgtcgtc tcgctcggcg cgaagccccg
      601 aaagagcacg ctctcgcgcg tggggtggat ctcgtcgcgg ccgtactgcc gctggctgcc
      661 ccgcttcacc tccccgccct gcagctgcgc gatgagctgc atcccgtagc agacgccgag
      721 caccggcgcg acgtcgaaca gcgcgggatc ggcggtcggg gcgttctccc cgtagacgga
      781 gttgggaccg ccgctgagga tgatgcccgt ggggtgccag tcgcggatcc actggagcgt
      841 ccgcgtcggc ggatggatct ccgagtagac gcgggcctcg cgcacgcgcc gcgcgatgag
      901 ctgggtgtac tgtgagccgt agtcgatgat caggatgcgg ctcgatgccg tcatgtccgc
      961 caatgcgctg cgtccagggt gaggaactcc accttcttct ccgtgagatc gaggatcgcg
     1021 gcgcgcggcg tgccgaacac ccagccgcac gactcgccgg gattcacgat cagcgtgtcg
     1081 ccgcgcgtct tcatctcctg ctggtgcgtg aagccgtgca cgacgatgct gtggctctcg
     1141 atgctgcgcg gctgcacgtc cccgatgtcg tggacgacga ggatccgctg ccctcccacc
     1201 tcgaagctgt gcgggctctc gaacagctcg gcgccgaatc cggccgtggc gcgggcgcgc
     1261 agtccctgct ggtcgccgtc gttcttgccg aacacgccgg cgagcgacat gctcgcctcc
     1321 tcgatcgggc gcagcgcgaa gggcgaacag tagtcgccgg cgtgaatgag catcgacacc
     1381 cccgacgcct gcatcatccg cacgaactcg gcgatcgccg gcacccggtc gtgactatcc
     1441 gccatcagcc cgacgcgcat cagccctttc tccactcggg gtggtcctgc tcgagacgga
     1501 cgagatcgtc gtacgtctcg cgcgccgtca cgacggcgta ccggtcgccg tcgaccagca
     1561 cctccgcgcc gcgcggcctc gtgttgtagt tggacgccat gacgtagccg tacgcgccga
     1621 cgtcgtgcac ggcgagcagg tcgccgggcc ccgcctgcgg caggtcgcgg tcgagggcga
     1681 gaaagtcgcc gctctcgcac accgggccca cgacgtccgc cttcatctgg cccaccggcg
     1741 gccccaccgg ctcgatccgg tgaaaggcgt catagtgcga cgggcgaatc agctcggtca
     1801 tccccgcatc ggtgacgagg aagtcgcgtc cgccgctgtg cttgcgatag agcacgcgcg
     1861 tgagcagcat ccccgagttg ccgacgacga accggcccgg ctccatcagc agcgtcaggc
     1921 cggtggggag gacgcgcggc acgagcgcgt gcgcgaagcg ctgcaggtcg gcggactcct
     1981 cgtcgtcgta cgacacgccc agcccgcccc cgatg
//
LOCUS       DASSYW010001040         2129 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_979407, whole genome shotgun sequence.
ACCESSION   DASSYW010001040 DASSYW010000000
VERSION     DASSYW010001040.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2129)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2129)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2129
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_979407"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1392
                     /locus_tag="VFN38_16435"
     CDS             <1..1392
                     /locus_tag="VFN38_16435"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HET9013414.1"
                     /translation="APDAPNRLWQPPRAAARPDSLRPASIPGDLAARADSLTLADVVD
                     LALQNNPATRASWAQARAAAAAYGSARGSFFPTVDGALTATRSSQPAATSSGNGGTVI
                     IDRTRSQVAPALSVSYLLFDIGGRGGRVASARENAFALDYTHNATIQNTVLQVEQAYF
                     TYVGTRALLEAQRISVRDAETSYRAASKRDSVGLATIADVLQARTALSQAQLALVTTE
                     GQLQTTRSALAVALGVSPTLPYDVVARAEDVPVGQVAGSVEELINGALRSRPELQAAY
                     ASEAAAREGIRVARSAALPSLALTGSAGYVNSTIPALTGRNYTVGLGLQLPLFNGGAR
                     QYDIARARALADAAAAQAQTVRQTVITDVFSSYYDVRTATQQVRTSDELLASANASLR
                     AAQARYTGGVGSILDLITAQTALASARAQQVQARWVWALRLAQLAHDAGALDVHGGAN
                     LRVRRDSTISPNP"
     gene            1396..>2129
                     /locus_tag="VFN38_16440"
     CDS             1396..>2129
                     /locus_tag="VFN38_16440"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HET9013415.1"
                     /translation="MLHRLASRHAAATLSALAAALLAGGCAKKDPAPRQPQVPVTVAV
                     VERGAAPYTLTANGTVEPRQTARVTAQVSGIVTSVEFREGEAVREGQVLFRIDPRPYA
                     AALAQAEAALARDQAQAAGARRDAERYQELARQDYVTKSQAEGQTTNAAALSATVAAD
                     RAAIAKARFDLENTVVRAPSSGRTGSLLVRTGNVVQASATQPLVVINQIAPILVRFTV
                     PASVFPDVQRFNRRGSLPVRVTSSDGG"
BASE COUNT          286 a          891 c          711 g          241 t
ORIGIN      
        1 gctcccgatg cgcccaatcg tctctggcag ccgccgcgcg ccgccgcgcg gcccgactcg
       61 ctgcggccgg cctcgatccc cggcgacctc gccgcgcgcg ccgactcgct gaccctcgcc
      121 gacgtcgtcg acctcgccct ccagaacaac cccgcgacgc gggccagctg ggcccaggcg
      181 cgcgccgcgg cggccgccta cgggtcggcg cgcggcagct tctttcccac ggtggacggc
      241 gcgctgacgg cgacccgctc gagccagccg gcggccacca gctcgggcaa tggcggcacc
      301 gtcatcatcg accgcacgcg cagccaggtc gccccggcgc tcagcgtcag ctacctgctg
      361 ttcgacatcg gcggccgcgg cggccgggtg gcgtcggcgc gcgagaacgc cttcgcgctc
      421 gactacaccc acaacgcgac gatccagaac acggtgctcc aggtggagca ggcgtacttc
      481 acctacgtcg gcacgcgcgc cctcctcgaa gcgcagcgca tctcggtgcg cgacgccgag
      541 accagctacc gggccgccag caagcgcgac tcggtggggc tggcgacgat cgccgacgtc
      601 ctccaggccc gcaccgcgct ctcccaggcg cagctcgcgc tggtcaccac ggaggggcag
      661 ctccagacga cgcgcagcgc cctcgccgtc gccctcggcg tctcccccac cctgccctac
      721 gacgtcgtcg cgcgcgccga ggacgtcccc gtcggccagg tggccgggag cgtcgaggaa
      781 ctgatcaacg gggcgctccg atcgcgcccc gagctgcagg cggcctacgc ttccgaggcc
      841 gcggcgcgcg aagggatccg cgtcgcccgc tcggcggcgc tcccctcgct cgccctcacc
      901 ggaagcgcgg gctacgtcaa ctcgaccatc cccgcgctca ccggccgcaa ctataccgtc
      961 gggctcgggc tccagcttcc cctcttcaac ggcggcgcgc gccagtacga catcgcgcgc
     1021 gccagggccc tcgccgacgc cgccgccgcc caggcgcaga ccgtccggca gaccgtcatc
     1081 accgacgtct tcagctccta ctacgacgtg cggacggcga cccagcaggt gcggacgagc
     1141 gacgagctgc tggccagcgc gaacgcctcg ctccgcgccg cgcaggcgcg ctacacgggc
     1201 ggggtgggca gcatcctcga cctcatcacc gcgcagaccg cgctcgccag cgcgcgcgcc
     1261 cagcaggtgc aggcccgctg ggtctgggcg ctgcgcctcg cccagctcgc ccacgacgcc
     1321 ggcgcgctcg acgtccacgg cggcgccaac ctccgggtca ggcgcgactc gacgatctcc
     1381 ccgaatccat agaccgtgct gcatagactc gcttcccgcc acgccgccgc cacgctctcc
     1441 gcgctcgccg cggcgctcct cgccggaggc tgcgcgaaga aggatccggc gccgcggcag
     1501 ccgcaggtgc cggtcaccgt ggccgtcgtc gagcgcggcg cggcgcccta cacgctgacc
     1561 gcgaacggca cggtggagcc gcggcagacg gcccgcgtca cggcccaggt gagcggcatc
     1621 gtcaccagcg tcgagttcag ggagggggag gcggtgcgcg aggggcaggt cctcttccgc
     1681 atcgacccgc gcccctacgc ggccgccctc gcccaggccg aggccgcgct cgcccgcgac
     1741 caggcgcagg cggcgggcgc ccggcgcgac gccgagcgct accaggagct cgccaggcag
     1801 gactacgtga cgaagagcca ggccgagggg cagacgacga acgccgccgc cctctcggcc
     1861 accgtcgccg ccgaccgcgc ggcgatcgcc aaggcgcgct tcgacctcga gaacaccgtc
     1921 gtccgcgccc cgagctccgg ccgcacgggc agcctcctcg tccgcaccgg gaacgtcgtg
     1981 caggcgagcg ccacgcagcc gctcgtcgtc atcaaccaga tcgccccgat cctcgtccgc
     2041 ttcaccgtgc cggcgtcggt cttccccgac gtgcagcgct tcaaccgtcg cggctccctc
     2101 cccgtgcgcg tcacctcgtc ggacggcgg
//
LOCUS       DASSYW010001041         4107 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1706062, whole genome shotgun sequence.
ACCESSION   DASSYW010001041 DASSYW010000000
VERSION     DASSYW010001041.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4107)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4107)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4107
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1706062"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            113..457
                     /locus_tag="VFN38_16445"
     CDS             113..457
                     /locus_tag="VFN38_16445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013416.1"
                     /translation="MRRYVVRVRSGPKVERLRFESLEAALAAIGSRGRELQSDAPARV
                     VDVKVRRFEPVQQVVGRLELSGPGRLRGGVDVRGDGSAEAYTGRMRRRLVLQEAGEDA
                     YAALARAITASR"
     gene            454..765
                     /locus_tag="VFN38_16450"
     CDS             454..765
                     /locus_tag="VFN38_16450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013417.1"
                     /translation="MSERWTVELPPDAQPPYRVFVSGVPQVQGKDYEVRGRTLAFARP
                     LAKEGRLGFFRWLSIFLGLVGTYRPHDSVDVQYTVGDKPKVAVGLDIVPPRGEARPGA
                     N"
     gene            814..1713
                     /gene="metF"
                     /locus_tag="VFN38_16455"
     CDS             814..1713
                     /gene="metF"
                     /locus_tag="VFN38_16455"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: protein motif:HMM:NF014296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004489 - methylenetetrahydrofolate
                     reductase (NAD(P)H) activity [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase [NAD(P)H]"
                     /protein_id="HET9013418.1"
                     /translation="MRIDETLEQRRPCFSFEFFPPKDDEGVERLFNAASELKQDDPAF
                     VSVTYGAGGSTRTRTIDIVKRIKRDLGLEAMAHFTCVGATVEQLREVLDQMQDAGIEN
                     VLALRGDPPKGETEWKQTPGGLQYSTELVRLIAENYDFSIGAACFPEVHPEAASLEDD
                     LRFMKEKMDAGVRFFITQLFFDNELYFNFVREARAFGIDVPIVPGIMPVSGYAQIKRI
                     AKMCGASIPEPLEHELAARDDADPDAVRELGVAYATLQASDLLARGAPGIHFYVLNRS
                     PSARAILAALRSARPWDRALEPV"
     gene            complement(1710..2714)
                     /locus_tag="VFN38_16460"
     CDS             complement(1710..2714)
                     /locus_tag="VFN38_16460"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HET9013419.1"
                     /translation="MSDSRRKRDLARADKVLPGVWRLRLPLPWPGVPHVNAWAVSSGS
                     GVVLFDTGLDEPGAMAQLERALDQAGLKLEHIRLLVCTHAHSDHYGLAGPIVDASGCE
                     LWMHPNHAHMTRAAQDPDRMLERRIEVARQSGVPEEALARYQEARKGQGLGVARVVLP
                     DRDLVPGVEVETDLGTFQVHETPGHAPSHVVLHQPDRGVLISGDHLLGRVSLYYDYGY
                     TPDPAGEFLSSLDVVDRLESSLCLAGHARPFRDVKEHIEANRREVAERIGRVRGALSN
                     GAKTPFQIVPTLLGVEHPNAMMINWGLSETLCYLRYLERRERIERVEDEGPERWAIAS
                     "
     gene            complement(2727..>4107)
                     /locus_tag="VFN38_16465"
     CDS             complement(2727..>4107)
                     /locus_tag="VFN38_16465"
                     /inference="COORDINATES: protein motif:HMM:NF014910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HET9013420.1"
                     /translation="KSYRDVVRGFRGQFRHPPDFVARPRDEADVEALLHWCAVEGAAA
                     VPFGGGTSVVGGVEPRVGDDYAGAVSIDMRSLDQVLEVDEISRAARIQAGATGPALED
                     GLRAHGLTLRHFPQSFEYSTLGGWIATRAGGHFATRLTRIDDLIESVRAITPRGGWQS
                     RRLPGSGAGPSPDRMLVGSEGILGVVTEAWVRVQDRPRWRGSAGVHFPSFEQGASAVR
                     ALTQSGLDPANCRLLDPAEASLTGAAPEGVALLVLGFESAHWPVDPWMERALECCADH
                     GGEAPEPPRFRGPGDEAQRDDSVGAWRNAFVQAPYLRDTMVAAGVISETFESAITWDR
                     LGAFVEDVRDTAERAVAAECGAGIVTCRFTHAYPDGAAPYFTVLAPARRGAEIDQWDA
                     IKAAASEAIASAGGTITHHHAVGRDHRPWYDRQRPEPFAAALRAAKAEVDPASIMNPG
                     VLVDPLPPR"
BASE COUNT          570 a         1496 c         1491 g          550 t
ORIGIN      
        1 cgatcgtgcg cgacgcggtg tggcgcaagg agctgaagca ccacgtgggc gagcgcggat
       61 tccgccagcc ggcgcgcacg atgagcgcca tcggcggctg agccccatcg gcttgaggcg
      121 ctacgtcgta cgggtccgca gcgggcccaa ggtggagcgg ctgcggttcg agtcgctgga
      181 ggccgccctg gccgcgatcg gctcacgcgg gcgcgagctg cagagcgacg cgcccgcgcg
      241 cgtggtggac gtgaaggtgc gccggttcga gcccgtgcag caggtggtgg ggcggctcga
      301 gctgtcgggc ccggggcggc tgcgcggagg cgtggacgtg cgcggcgacg gctcggccga
      361 ggcctacacc ggccggatgc ggcgccggct cgtgctccag gaggccggcg aagacgccta
      421 cgccgcgctg gcgcgggcta taacagcgag tcgatgagcg agcgctggac agtggagctg
      481 ccgcccgacg cccagccccc gtaccgggtg ttcgtgagcg gggtgccgca ggtgcagggc
      541 aaggactacg aggtgcgcgg gcgcacgctc gccttcgcgc ggccgctcgc gaaggagggc
      601 cggctcggct tcttccgctg gctctcgatc ttcctcgggc tcgtgggcac ctaccgcccg
      661 cacgactcgg tggacgtgca gtacacggtc ggcgacaagc cgaaggtggc ggtggggctg
      721 gacatagtgc cgccgagagg ggaagcgcgg cctggagcga actgactggc agttcctgtc
      781 cgctgtccgc cgtcacctgt ctaccctttt tagatgcgca tcgacgagac actcgagcag
      841 cgacgcccct gtttctcctt cgagttcttc ccgccgaagg acgacgaggg cgtggagaga
      901 ctgttcaacg ccgcctccga gctgaagcag gacgaccccg cgttcgtgtc cgtcacctac
      961 ggcgccggcg gctccacgcg cacgcgcacg atcgacatcg tgaagcggat caagcgcgac
     1021 ctcggcctcg aggcgatggc ccacttcacc tgcgtcggcg ccaccgtgga gcagctgcgc
     1081 gaggtgctcg accagatgca ggacgccggg atcgagaacg tgctggcgct gcgcggcgac
     1141 ccgcccaagg gcgagaccga gtggaagcag acgcccggcg ggctccagta ctccaccgag
     1201 ctcgtcaggc tcatcgccga gaactacgac ttctcgatcg gcgccgcctg cttccccgag
     1261 gtgcaccccg aggcggcaag cctggaggac gacctccggt tcatgaagga gaagatggac
     1321 gccggcgtgc gcttcttcat cacgcagctc ttcttcgaca acgagctcta cttcaacttc
     1381 gtgcgcgagg cgcgcgcctt cggcatcgac gtgccgatcg tgcccgggat catgcccgtc
     1441 agcggctacg cgcagatcaa gcggatcgcg aagatgtgcg gcgcgtccat ccccgagccg
     1501 ctcgagcacg agctggccgc ccgcgacgac gcagacccgg acgccgtgag ggagctgggc
     1561 gtggcctacg cgacgctcca ggcctccgac ctgctggccc gcggcgcgcc ggggattcac
     1621 ttctacgtgc tgaaccgctc accctcggcg cgcgcgatcc tcgcggcgct ccgcagcgcg
     1681 cgcccctggg atcgcgcgct cgagccggtc taactcgcga tcgcccagcg ctccgggccc
     1741 tcgtcctcca cgcgctcaat tcgctcgcgg cgctccaggt agcgcaggta gcagagggtc
     1801 tccgacaggc cccagttgat catcatcgcg ttcgggtgct caacgccgag cagcgtcggc
     1861 acgatctgaa acggcgtctt cgccccgttc gacagcgcgc cgcgcacgcg gccgatccgc
     1921 tccgccacct cgcgccggtt cgcctcgatg tgctccttca cgtcgcggaa cgggcgcgcg
     1981 tggccggcga ggcagaggga ggattcgagc cggtccacca cgtcgaggct cgagaggaac
     2041 tcgccggcgg ggtcgggcgt gtagccgtag tcgtagtaga gcgagacgcg gccgagcagg
     2101 tggtcgcccg agatcagcac gccgcggtcg ggctggtgca ggaccacgtg ggacggggca
     2161 tggccgggcg tctcgtgcac ctgaaacgtg ccgaggtcgg tctcgacctc cacgcccggc
     2221 acgaggtcgc ggtcgggcag caccacgcgc gccacgccca ggccctggcc cttgcgcgcc
     2281 tcctggtagc gggcgagcgc ctcctcgggc acgccgctct ggcgcgccac ctcgatccgg
     2341 cgctcgagca tccgatccgg gtcctgggcc gcgcgcgtca tgtgcgcgtg gttcgggtgc
     2401 atccacagct cgcagcccga cgcgtccacg atcgggccgg cgagcccgta gtggtcgctg
     2461 tgcgcgtgcg tgcacacgag caggcggatg tgctcgagct tgagcccggc ctggtcgagc
     2521 gcgcgctcca gctgcgccat cgcgcccggc tcgtcgagcc cggtgtcgaa cagcaccacg
     2581 ccgctgcccg agctcaccgc ccaggcgttc acgtgcggca cgccgggcca cggcaggggc
     2641 agccgcaggc gccagacgcc gggcaggacc ttgtcggcgc gtgcgaggtc gcgcttgcgg
     2701 cgggagtcac tcatgagcag gagaggtcag cgtggcggga gcggatccac cagcacgccg
     2761 gggttcatta tggacgccgg gtccacctcc gccttcgccg cgcgaagcgc cgccgcgaac
     2821 ggctcgggac gctgccggtc gtaccacggc cggtgatcgc gccccacggc gtggtggtgg
     2881 gtgatcgtgc cgccggcgct cgcgatcgcc tcggacgcgg ccgccttgat cgcgtcccac
     2941 tggtcgatct cggccccccg gcgggcaggc gcgagcacgg tgaagtaggg cgcggcgccg
     3001 tcggggtagg cgtgggtgaa gcggcaggtg acgatgccgg cgccgcactc cgcggccacc
     3061 gcgcgctcgg ccgtgtcgcg cacgtcctcg acgaaggccc cgagccggtc ccacgtgatc
     3121 gcgctctcga acgtctcgct gatcacgccg gccgccacca tcgtgtcgcg caggtagggc
     3181 gcctggacga aggcgttccg ccacgcgccc acggagtcgt cccgctgcgc ctcgtcgccc
     3241 ggaccgcgga agcgcggcgg ctcgggagcc tctcccccgt ggtcggcgca gcattcgagc
     3301 gcgcgctcca tccacgggtc cacgggccag tgcgccgact cgaacccgag cacgagcagg
     3361 gccacaccct cgggcgccgc ccccgtcagc gacgcctcag cggggtcgag gagccggcag
     3421 ttcgccgggt cgaggccgga ctgggtgaga gcccgcaccg ctgacgcgcc ctgctcgaag
     3481 ctcgggaagt gcacgcccgc cgaaccacgc cagcgcggcc ggtcctgcac ccggacccac
     3541 gcctctgtca ccaccccgag gatcccctcg gagccgacca gcatgcggtc cgggctgggg
     3601 ccggcgcccg agcccggcag ccgccggctc tgccagccgc cgcgcggggt gatcgcgcga
     3661 accgactcga tgaggtcgtc gatgcgcgtg agccgcgtgg cgaagtgccc gcccgcccgc
     3721 gtggcgatcc agccgccgag cgtggagtac tcgaacgact gcgggaagtg ccgcagcgtg
     3781 agcccgtgcg cgcgcaggcc gtcctcgagc gccggccccg tcgcgccggc ctggatccgt
     3841 gcggcgcgcg atatctcgtc cacctcgagc acctggtcga gcgagcgcat gtcgatagag
     3901 acggcccccg cgtagtcgtc tcccacgcgc ggctcgacgc ctcccacgac gctcgtgccg
     3961 ccgccgaagg gaacggccgc cgcgccctcg accgcgcacc agtggaggag cgcctcgacg
     4021 tcggcctcgt cgcgcggccg ggccacgaag tcgggcgggt ggcggaactg gccgcggaac
     4081 ccgcgcacca cgtcgcggta cgacttc
//
LOCUS       DASSYW010001042         2388 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_805023, whole genome shotgun sequence.
ACCESSION   DASSYW010001042 DASSYW010000000
VERSION     DASSYW010001042.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2388)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2388)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2388
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_805023"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2277)
                     /locus_tag="VFN38_16470"
     CDS             complement(<1..2277)
                     /locus_tag="VFN38_16470"
                     /inference="COORDINATES: protein motif:HMM:NF019229.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CRTAC1 family protein"
                     /protein_id="HET9013421.1"
                     /translation="MGEFRDVTVAEFLLTSIEAEGLADPPSSLRTTVRYDLVGGGTKA
                     YRVEHVGAWEMAWRRRASGWQVVRWTATSHLVSRARQPAFTEITDAALGRADSFRRQL
                     SIDLDSWMATLDSVLTRDSNGHHGVSVGDADGDGLDDLYVAQPAGLPNRLYRNRGDST
                     FEDITSDAGVAVLDDTAQSLFADVENDGDQDLVVAASTGLLLFVNDGKGHFTLAPDGF
                     RLAQPFQGVLTSIAMADYDRDGFLDLYVCVYSYLFGAGEDKAGTPAPYHDARNGPPSV
                     LFRNDGKGRFVDATADAGLDAGNDHYHFAAAWADYDGDGWPDLLVANDFGTKNLYRNL
                     GRRNGTVTFEDVAASSGLLDHGAGMSATFLDYDNDGLLDIYTGNMWSAPGQRITSAPA
                     FMRDAPPDVRDAFRRHVRGNSLFRNLGNGRFEDRTLEAHAEMGRWAWSSDALDFDSDG
                     WDDLYVANGMLTRKSPGDLEGFFWRQVVARSPLTRVPGTPYDDAWRAINQLLIHGSIA
                     SHQRNVLLRNDGHGGYDEISGTAGLDLDQDGRSFAVLDIDGEGDPDLVVMAARQSPQL
                     RVFRNDFETRSASIALRLVGTRSNRDAIGARVTIETDRIRKTRVLQCGSGFLSQHSKE
                     LVIGLGASDRLTKLTVSWPSGDTQVFTDVPLNARVRIVEGRGIESEAFKPRSTRAIAP
                     PASAPAGAPRTTWMYEPFPAPDVAVPDLPGDARSVAAMRGRPAIVLLWSPKVDAARAA
                     RDTLERGAQALTRAGVRSI"
BASE COUNT          375 a          812 c          832 g          369 t
ORIGIN      
        1 gatcgatcgc acgccggcgc gggtcagcgc ctgcgcaccg cgctcgagcg tgtcgcgcgc
       61 cgcgcgcgcc gcgtccacct tgggcgacca cagcaggacg atcgccggac gccctctcat
      121 cgccgcgacc gagcgcgcgt cgccggggag atcgggcact gccacgtccg gcgccggaaa
      181 cggctcgtac atccaggtgg tccgcggcgc cccggcggga gcggaggcgg gcggcgcgat
      241 cgctcgcgtc gatcgcggct tgaaggcctc gctctcgatg ccacgccctt cgacgatgcg
      301 aacgcgggcg ttcagcggga cgtcggtgaa cacctgcgtg tcccccgagg gccagctgac
      361 ggtgagcttc gtaagacggt cgctggcgcc cagaccgatc acgagctcct tcgaatgctg
      421 cgagagaaat ccggacccgc actgcaggac gcgcgtcttg cggatacgat cggtctcgat
      481 cgtcacccgc gcgccgatcg cgtcgcggtt gctcctggtc ccgaccaggc gcagggcgat
      541 cgacgccgac ctcgtctcga agtcgttccg gaagacgcga agctgcggcg actgccgggc
      601 ggccatcacg accagatccg gatcgccctc gccgtcgatg tcgagcaccg cgaacgaccg
      661 gccatcctgg tcgaggtcga ggccggccgt gccggagatc tcgtcgtagc ctccatgtcc
      721 gtcgttgcgg agcaacacgt tgcgctggtg gctggcgatc gagccgtgaa tcaagagctg
      781 attgattgca cgccaggcgt cgtcgtacgg ggtgcccggc acccgcgtca gcggtgagcg
      841 ggccacgacc tggcgccaga aaaagccttc gaggtcgccg ggcgacttgc gcgtcaacat
      901 gccgttggcg acgtagagat cgtcccagcc atcgctgtcg aagtcgagcg cgtccgacga
      961 ccacgcccag cgccccatct cggcatgcgc ttccagcgtc cggtcttcga accgtccatt
     1021 cccgagattt cggaacagcg aattgccccg cacgtggcgt cgaaaagcgt cgcgcacgtc
     1081 gggcggcgcg tcacgcatga acgccggcgc cgaggtgatg cgctggccgg gcgcgctcca
     1141 catgttgccg gtatagatgt cgagaaggcc gtcgttgtcg tagtcgagga aggtggcgct
     1201 cattccggcg ccgtgatcga gcagccccga cgatgcggcg acgtcctcga acgtcacggt
     1261 gccgttccgg cgccccaggt tgcggtagag gttcttcgtt ccgaagtcgt tcgcgaccag
     1321 caggtcgggc cagccgtcgc cgtcgtagtc ggcccaggcg gccgcgaaat gatagtgatc
     1381 gttgccggcg tcgaggccgg cgtcggcggt ggcgtcgacg aaccggccct tgccgtcatt
     1441 gcgaaagagc acgctcgggg gaccgttgcg cgcgtcgtgg tacggtgccg gcgtgcctgc
     1501 cttgtcctca ccggcgccga agagatagga atacacgcac acgtacaggt ccagaaagcc
     1561 gtcccggtcg tagtcggcca tcgcgatcga cgtcagcacg ccttgaaagg gctgcgcgag
     1621 ccggaagccg tccggcgcga gcgtgaagtg ccccttgccg tcgttgacga agagcagcag
     1681 gccggtggac gccgcgacga cgagatcctg atcgccgtcg ttctcgacgt cggcgaagag
     1741 cgattgtgcc gtgtcgtcga gcacggccac gcccgcgtcg gacgtgatgt cctcgaaggt
     1801 ggagtcgccg cgattgcggt acaaacggtt gggcagtccg gccggctgcg cgacgtacag
     1861 gtcgtcgagt ccgtctccgt cggcgtcgcc caccgagacg ccgtggtgac cgttcgagtc
     1921 acgcgtgaga accgagtcga gcgtcgccat ccacgagtcg agatcgatcg agagttgacg
     1981 ccggaacgaa tcggcgcgtc cgagcgccgc gtcggtgatc tcggtgaagg ccggctgccg
     2041 cgcacggctg accagatgcg acgtcgccgt ccagcgaacg acctgccacc ccgaggcgcg
     2101 ccgccgccat gccatttccc acgcgccgac gtgctcgacg cggtacgcct tcgtcccgcc
     2161 gccgacgagg tcatatcgca cggtggtgcg gaggctggac ggcggatccg ccaagccctc
     2221 cgcttcgatc gacgtgagga ggaactccgc caccgtgacg tcgcgaaact ctcccatgag
     2281 ccgctgcagt tccgcggcga aggccccagc gtcgagcgtc gcctcgcgcg gcaggtctgg
     2341 cgcccgcctg acgtcgagtg gcggcaggtc actgggggca gcgtcgat
//
LOCUS       DASSYW010001043         2343 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1001703, whole genome shotgun sequence.
ACCESSION   DASSYW010001043 DASSYW010000000
VERSION     DASSYW010001043.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2343)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2343)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2343
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1001703"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..535)
                     /locus_tag="VFN38_16475"
     CDS             complement(<1..535)
                     /locus_tag="VFN38_16475"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: protein motif:HMM:NF014200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004185 - serine-type carboxypeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase"
                     /protein_id="HET9013422.1"
                     /translation="MTVRLIACALALLLTTACAGRNAPVLHGAPASGHAARAVKPTPQ
                     VSALRHDLTAVFTAPIMSRGAWAVEVRSLDTGEELYTLDAQRLMMPASNMKILTTAAA
                     GELLGWDYRFTTTLESAAPIEGGTLKGDLFIRGSGDPTINARDGRAPAVLAEWAAALR
                     ALGISRIDGRIVGDDQAF"
     gene            complement(546..1880)
                     /locus_tag="VFN38_16480"
     CDS             complement(546..1880)
                     /locus_tag="VFN38_16480"
                     /inference="COORDINATES: protein motif:HMM:NF025598.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4340 domain-containing protein"
                     /protein_id="HET9013423.1"
                     /translation="MRGLRTFILLLVVLIGLGSYVYFVESKRDPSGADKKDKVFSVQA
                     DKIDEITVKSESGEQTTLKKSGSDWQIAAPVAAQPDSAEVSGLTTNLSSLEISRVIEE
                     NPGDLAEYGLAQPRIEVAFRAGSEERRLQIGKKTPPGTDLYAKLSDQKRVFLIPSYVE
                     ATFNKKTFDLRDKTVLKLERDKIDRLTIVTAARTLEFAKENSEWRMTAPLKARADFTS
                     VDGLVSRLNTLQMKSLVAAEAANLTEYGLDKPKVTIRLGSGSSLATLLIGKESGEGVD
                     FAKDQSRPAVFTIEKSVGEDAGKEPSEYRQKDLFDARAFNTTRIEVARGSDTLAFEKV
                     KTKNKDGQDQEQWRQVAPAAKDADQTKVDNLIAAVTGARATGFTESAAKTGLDKPELS
                     ITVKFDDGKREEKVAFARSGSDGFAARTGEPGAAKVDIAAIENIVKSLDALK"
     gene            complement(1885..>2343)
                     /locus_tag="VFN38_16485"
     CDS             complement(1885..>2343)
                     /locus_tag="VFN38_16485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013424.1"
                     /translation="TFIQSGRNSWAESDLKTLTSKGEAQQDVSSGDVQGPISLAVAVT
                     APVEGAATPPPADGDANASKPETRLVVVGDSDFAANSVAGMGGNRDMFLNIVNWLAQQ
                     ENLISVRPRNPEDRRVTMTAGQASAIFWFAIAVLPGLIFLAGIQTWWRRR"
BASE COUNT          331 a          806 c          780 g          426 t
ORIGIN      
        1 cgaacgcctg atcgtcgccg acgatgcggc cgtcgatgcg ggagatgccg agggcgcgca
       61 gcgccgccgc ccattcggcg aggacggccg gcgcccttcc gtcgcgcgcg ttgatggtcg
      121 ggtcccccga gccgcggatg aagagatccc ccttcagcgt tccgccctcg atcggcgccg
      181 cgctctcgag cgtcgtcgtg aagcgataat cccagccgag gagttcgccc gcagccgccg
      241 tcgtcaggat cttcatgttc gacgccggca tcatcagccg ctgtgcatcg agcgtgtaga
      301 gctcctcgcc ggtgtcgagc gagcggactt cgaccgccca cgcgccccgc gacatgatcg
      361 gggcggtgaa gacagcggtc agatcatggc ggagggcgct gacctgcggc gtcggcttga
      421 ccgcccgcgc cgcgtgcccg gaggcgggcg cgccgtgcag cacgggcgcg ttgcggcccg
      481 cgcatgccgt ggtcagcagg agagcgagag cgcacgcgat gagccgcacc gtcatgcgca
      541 cgacgctatt tgagcgcgtc gagcgacttg acgatgttct cgatggcggc gatgtcgacc
      601 ttggccgcgc caggctcgcc ggtgcgggcg gcgaagccgt ccgacccgct gcgcgcgaac
      661 gcgactttct cttcacgctt cccgtcgtcg aacttgacgg tgatcgacag ctccggcttg
      721 tcgagccccg tcttggcagc cgactcggtg aacccggtcg cgcgcgcacc ggtaaccgcg
      781 gcgatgaggt tgtcgacctt cgtctggtcg gcgtccttcg ccgccggtgc gacctggcgc
      841 cactgctcct ggtcctggcc gtccttgttc ttggtcttga ccttctcgaa cgcgagcgtg
      901 tcgctgccgc gcgcgacctc gatgcgcgtc gtgttgaagg cgcgcgcatc gaacagatcc
      961 ttctggcggt actcggacgg ctccttgccg gcgtcctcgc caacggactt ctcgatcgtg
     1021 aacaccgccg gccgcgactg gtccttcgcg aagtcgacgc cctcgccgga ctccttgccg
     1081 atcagcagcg tcgccagcga cgatcccgac ccgagacgga tcgtgacctt cggcttgtcg
     1141 aggccgtatt cggtcaggtt cgcggcctcc gcggcgacga gcgacttcat ctgcagcgta
     1201 ttgagacggc tgaccagccc gtcgaccgag gtgaagtccg cccgcgcctt gagcggcgcc
     1261 gtcatccgcc actcgctgtt ctctttggcg aactccagcg tgcgcgccgc cgtcacgatc
     1321 gtcagccgat cgatcttgtc gcgctcgagc ttgagcacgg tcttgtcgcg gaggtcgaag
     1381 gtcttcttgt tgaaggtcgc ctcgacgtac gaggggatca agaacacgcg cttctgatcc
     1441 gagagcttgg cgtagaggtc ggtccccggc ggcgtcttct tgccgatctg caggcggcgc
     1501 tcctcgctgc cggccctgaa ggcgacctcg atgcgcggct gcgccagccc gtactcggcg
     1561 agatcgccgg gattctcctc gatgacgcgg ctgatttcga gcgacgagag attcgtcgtc
     1621 aggcccgaga cctcggcgct gtccggctgc gccgcgaccg gtgccgcgat ctgccagtcg
     1681 ctcccgctct tcttgagggt cgtctgctcg ccggattccg acttgaccgt gatctcgtcg
     1741 atcttgtccg cctggaccga aaagaccttg tccttcttgt cggcgccgga cgggtcgcgc
     1801 ttcgactcga cgaagtagac gtacgacccg aggccgatga ggacgacgag caggaggatg
     1861 aacgttcgca ggccgcgcat gtcgctatcg cctccgccac cacgtctgga tgccggcgag
     1921 gaagatcaga cccggcagca cggcgatggc gaaccagaag attgccgacg cctggcccgc
     1981 cgtcatcgtc acgcggcgat cctcggggtt gcgcggccgc accgagatca ggttctcctg
     2041 ctgcgcgagc cagttgacga tgttgaggaa catgtcgcgg ttgccgccca taccggcgac
     2101 gctgttggcg gcgaaatcgg aatccccgac gacgaccagg cgcgtttcgg gcttgctggc
     2161 attggcgtcg ccatcggcag gtgggggagt cgcagcgcct tccaccggcg ccgtcaccgc
     2221 gacggcgagg gaaatcggcc cctgcacgtc gccgctcgag acgtcctgct gcgcttcgcc
     2281 cttcgacgtc agcgtcttca gatcgctctc cgcccagctg ttgcggccgc tctggatgaa
     2341 cgt
//
LOCUS       DASSYW010001044         2485 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_494078, whole genome shotgun sequence.
ACCESSION   DASSYW010001044 DASSYW010000000
VERSION     DASSYW010001044.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2485)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2485)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2485
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_494078"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..409
                     /locus_tag="VFN38_16490"
     CDS             <1..409
                     /locus_tag="VFN38_16490"
                     /inference="COORDINATES: protein motif:HMM:NF024700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HET9013425.1"
                     /translation="GTPAADDRLLEQLAVTDVLDTPLRLLSGGTRQKINAAAAFLFAP
                     PCYILDEPTAGLDPVAAGVLKRRIHAERAAGSTIVLTSHVMSEIDELADDVAFLVDGR
                     VAFHGELTALKHLAGESQLERAIAELMTRELAA"
     gene            406..1191
                     /locus_tag="VFN38_16495"
     CDS             406..1191
                     /locus_tag="VFN38_16495"
                     /inference="COORDINATES: protein motif:HMM:NF024091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HET9013426.1"
                     /translation="MTRLVAWYQARDVARSRWLVAYTLFFALVTEALLRFAGGGARTI
                     LSLASVMLYVVPLVTLVFGTISFYNARELIELLLAQPVPRGVLYRGLYLGLAAPLALA
                     VVAGIGTPFVLRGFGETGQGSTLAALLLVSVALSAICSAAAFCIALWSDDRLKGLAAA
                     IGVWLLGAIVYDGLVLAVVAAFADYPLERPMLALMLANPIDLARVTLLLQLDVSALMG
                     YTGAVFQQFLGGIVGTLVAAGALIVWFAVPVALGARTFRHKDF"
     gene            1255..1707
                     /locus_tag="VFN38_16500"
     CDS             1255..1707
                     /locus_tag="VFN38_16500"
                     /inference="COORDINATES: protein motif:HMM:NF012355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /protein_id="HET9013427.1"
                     /translation="MRHFTRRDRVAALVLGAALLALGCSGEGKREGGEQREHSEQEKK
                     AEGGEGHGKVIVVEAYSDANGNYFKPADFEAHRGDTIRFTLKSGVHNVHFLPDSNPGR
                     TGLPAASDLLQIPGQTYDLPITFAEGRYYYQCDPHAALGMKGHVKVED"
     gene            complement(1726..>2485)
                     /locus_tag="VFN38_16505"
     CDS             complement(1726..>2485)
                     /locus_tag="VFN38_16505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013428.1"
                     /translation="RPVYDYDAANGPAIYRNRSWPKPASSPIKMTMEQADSVPSYIQI
                     DKPMTFQGGPIKATIDPQRLSIPGVLQRADIFVLRMIADSFGERPIYLSRTSAGYGSE
                     LGIGSYLLTQGLATKLFIPPVSANKDTLLVSGAGWVDVARTKTLWDSVFVGQRSLAKR
                     TDWVDRPSVGIPYLYVATGLMLSEVLQATGDSTGGTKVLAEAKAVAQGVKLTELLGQL
                     EQQAPPVPSVPATSPLLVPPSDTQRGKSVPVRKP"
BASE COUNT          343 a          869 c          877 g          396 t
ORIGIN      
        1 cggcacgccg gcggcggacg accgtctgct cgaacagctc gcggtgacgg acgtgctgga
       61 cacgccgttg cgcctgctct ccggcggcac gcggcagaag atcaacgcgg ccgcggcgtt
      121 cctgttcgcg ccgccctgct acatcctcga cgagcccacc gcggggctcg acccggtggc
      181 ggccggcgtg ctcaagcggc gcatccatgc ggagcgcgcg gcgggcagca cgatcgtcct
      241 cacgtcgcac gtcatgagcg agatcgacga gctggccgac gacgtcgcgt tcctcgtcga
      301 cggcagggtc gccttccacg gcgagctgac ggcgctcaag cacctggccg gcgagtcgca
      361 gctcgagcgc gcgatcgccg aattgatgac gcgggagctg gccgcatgac gcgcctggtg
      421 gcgtggtatc aggcgaggga cgtcgcgcgc agccggtggc tcgtcgcgta cacgctcttc
      481 ttcgcgctcg tgaccgaggc gctgctgcgc ttcgccggcg gcggggcgcg cacgatcctc
      541 agtctcgcga gcgtcatgct ctacgtggtg ccgctcgtga cgctcgtctt cggcaccatc
      601 tccttctaca acgcgcgcga gctgatcgag ctgctgctgg cccagccggt gccgcgcggc
      661 gtcctctatc gcgggctcta tctcgggctg gcggcgccgc tggcgctcgc cgtggtggcg
      721 gggatcggca cgcccttcgt gctgcgcggc ttcggcgaga ccgggcaggg cagcacgctc
      781 gccgccctgc tgctcgtctc cgtcgcgctc tcggcgatct gctcggccgc ggcgttctgc
      841 atcgccctct ggagcgacga ccgcctcaag gggctcgcgg cggcgatcgg cgtgtggctg
      901 ctcggcgcca tcgtgtacga cgggctggtg ctcgccgtcg tcgcggcgtt cgcggactac
      961 ccgctcgaac ggcccatgct cgccctcatg ctcgccaacc cgatcgatct cgcgcgggtc
     1021 acgctgctgc tgcagctcga cgtctcggcg ctcatgggct acacgggcgc cgtgttccag
     1081 cagttcctcg gcggcatcgt cggcacgctc gtcgccgccg gcgcactcat cgtctggttc
     1141 gccgtgccgg tggcgctggg ggcgcgcacc ttccgccaca aggatttcta gcacgaccaa
     1201 ggcccgggct ggcagcgggc cgtccaccat tcacgcacac ggagaagatc ggacatgagg
     1261 cacttcactc gtcgcgaccg cgtcgcggcc ctcgtactcg gcgcggcgct gctcgccctc
     1321 ggctgttcgg gagaaggcaa gcgcgagggc ggcgagcagc gcgagcactc ggagcaggag
     1381 aagaaggcag agggcgggga ggggcacggg aaggtcatcg tcgtggaggc gtacagcgac
     1441 gccaacggca actacttcaa gcccgccgac ttcgaggcgc atcgcggtga taccattcgc
     1501 ttcacgctca agtcgggcgt gcacaacgtg cacttcctcc ccgactccaa cccgggacgc
     1561 accggcctgc cggcggccag cgacctgctg cagatcccgg ggcagaccta cgatttgccg
     1621 atcaccttcg ccgaaggacg ctactactac cagtgcgacc ctcacgcggc cctgggcatg
     1681 aagggccacg tgaaggtcga ggactgacga tgcgcgtcgg tgccgctacg gcttcctgac
     1741 cggcaccgac ttgccgcgct gggtgtccga cggcggcacg aggagcgggc tcgtcgcggg
     1801 caccgacggc accggcggcg cctgctgctc gagctgcccc agcagctcgg tgagcttcac
     1861 tccctgcgcc accgccttcg cctcggcgag caccttggtg ccgccggtgg agtcgcccgt
     1921 cgcctggagc acttcggaga gcatcagccc cgtggcgacg tagaggtacg ggatgccgac
     1981 cgagggccgg tcgacccagt ccgtccgctt ggcgagcgag cgctgtccga cgaagacgct
     2041 gtcccacagc gtcttcgtgc gggcgacgtc cacccatccg gcgcccgaga cgagcagcgt
     2101 gtccttgttg gcggagaccg gcgggatgaa cagcttggtc gcgagcccct gcgtgagcag
     2161 gtagctgccg atgcccagct cgctgccgta gccggcggag gtgcggctga ggtagatcgg
     2221 ccgctcgccg aaggagtcgg cgatcatgcg gagcacgaag atgtcggcgc gctggagcac
     2281 gccggggatc gacaggcgct gcggatcgat cgtcgccttg atcgggccgc cctggaacgt
     2341 catcggcttg tcgatctgga tgtacgacgg caccgagtcg gcctgctcca tcgtcatctt
     2401 gatcggcgag ctggccggct tgggccagct gcgattgcgg tagatcgccg gaccgttcgc
     2461 cgcgtcgtag tcgtacacgg ggcga
//
LOCUS       DASSYW010001045         2602 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_47818, whole genome shotgun sequence.
ACCESSION   DASSYW010001045 DASSYW010000000
VERSION     DASSYW010001045.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2602)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2602)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2602
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_47818"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2429)
                     /locus_tag="VFN38_16510"
     CDS             complement(<1..2429)
                     /locus_tag="VFN38_16510"
                     /inference="COORDINATES: protein motif:HMM:TIGR01686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIIC family phosphatase"
                     /protein_id="HET9013429.1"
                     /translation="MTLSADFSVRIAASFTTDPLIPAVEFWMKELALDAAIEAAPYGQ
                     QLQSLLDPGSVLNARGRGANVLLLRVQDWLRELPDEHVADIERVREYLQHTTRDFEKA
                     VRAHRAQASNETTLLICPSYGLSSSAERILVRQTEETIAASLAGVAGLQVVPVTQFHQ
                     VYDVNEDEVHDELRDHIAHIPYVDDYLHVLAALVARHVHRRIAPVRKVVVVDCDNTLW
                     RGVVGEQGPEGVEFDAGHRALHALLVRLSQRGVLVCLCSKNEESDVWSVFETRADFGL
                     KREHVVAAMVNWLPKSQNLRTLAGRLNLGLDSFVFIDDNPVECAEVRAGVPEVLTIQW
                     PQEPDRAERLTRHIWELDEGKSTKEDARRTELYKEEFRRQEARAEMLTFEHFIDSLQL
                     QVDFSPLTAEDLRRSAQLTLRTNQFNFTTIRREEADVQALADGGRHEIRTVRVRDRFG
                     DYGLVGLLIAERGDEAWTLDTFLLSCRVLGRGVEHRIMSDLGQMASSAGAQAVRMRVA
                     TTKRNAPARTFFEAVVPGEYRHASAEGVEAEVPAAALADVRFEPASAGEVVIEDDGGS
                     KAAAPVDAAQLRRREEQIARAAFELAAGAAMRAAAEGRPAPSASATAGAGESDIASVV
                     HEAFAAALRVSVDTVVQTDGLEALGCGSLKIVEITVALSERFPWLPSTLLFEHRSVSQ
                     IVREIVRLSAPQAAQGVSARPSRRSESPQVPAAGSRDIAVVGIGVRVAGAESPEDLWS
                     LLSAGQSAVKPVPEQRPYFLHSLNDTRPHWAGLLDRVGAFDPEFFGVSPREAEVMDPQ
                     LRLFLEVAWAAL"
BASE COUNT          397 a          917 c          887 g          401 t
ORIGIN      
        1 agcgccgccc aagcgacttc gaggaacagc cgcagttgcg ggtccatgac ctcggcttcg
       61 cggggcgaga cgccaaagaa ttccgggtcg aatgcgccga cccgatcgag cagcccggcc
      121 caatgcggcc gcgtgtcgtt cagcgaatgc aggaagtagg gacgctgctc cggcaccggc
      181 ttcacggcgc tctgtccggc gctgagcagc gaccagaggt cttccggcga ttcggctccg
      241 gccacgcgca ccccgatgcc gacgaccgcg atgtcgcggc ttccggccgc ggggacctgc
      301 ggtgactcgc tgcgccggga cgggcgggcg gaaacgccct gtgccgcctg cggcgcggac
      361 agccggacga tctcgcgcac gatctggctc accgagcggt gctcgaagag cagcgtgctc
      421 ggcagccagg ggaaccgctc gctgagcgcg accgtgattt cgacgatctt gagcgagccg
      481 cagccgagcg cttcgagacc gtcggtctgc accacggtgt ctaccgagac gcgcaacgcc
      541 gccgcgaacg cctcgtgcac gaccgacgcg atgtcggact cgccggcgcc tgccgtagca
      601 ctcgcggacg gcgcgggccg tccttcggcc gccgcacgca tcgcggcgcc ggcggcgagc
      661 tcgaacgcgg cgcgcgcaat ctgctcctcg cggcgccgaa gctgtgcggc gtcgaccgga
      721 gcggccgctt tcgatccgcc gtcgtcctcg atgaccactt cgccggcgga tgccggctcg
      781 aaccgcacgt ccgccagcgc cgcggccggc acttccgcct caacgccttc cgcgctggca
      841 tggcggtatt cgccgggaac caccgcctcg aagaacgtgc gggccggggc attccgcttc
      901 gtcgtggcga cgcgcatccg caccgcctgc gctccggccg acgacgccat ctgcccgagg
      961 tccgacatga tccggtgctc gacgccgcgc cccagcacgc ggcagctgag aaggaacgtg
     1021 tcgagcgtcc acgcctcgtc gccgcgctcg gcgatgagca gccccaccag gccgtagtcg
     1081 ccaaagcgat cgcgcacgcg aaccgtacgg atctcgtggc ggccgccgtc ggcgagcgcc
     1141 tggacgtcgg cttcctcgcg cctgatggtc gtgaagttga actggttggt gcgcagcgtg
     1201 agctgcgccg agcggcgcag gtcttcggcc gtgagcggcg agaagtccac ctggagctgc
     1261 aggctgtcga tgaaatgctc gaaggtgagc atctccgccc gcgcctcctg ccggcggaac
     1321 tcctccttgt acagctcggt gcggcgcgcg tcctctttgg tcgacttgcc ttcgtcgagc
     1381 tcccagatgt gccgcgtgag ccgctcggcc cggtcgggct cctgcggcca ctggatcgtc
     1441 agcacctcgg gaacacccgc gcgcacttcg gcgcactcca ccgggttgtc gtcgatgaag
     1501 acgaagctgt cgaggccgag attgagccgt ccggccagcg tgcggagatt ctgcgacttg
     1561 ggcagccagt tgaccatggc cgccacgacg tgctcgcgct tcaagccgaa gtcggcgcgt
     1621 gtctcgaaca cgctccagac gtcgctctct tcgttcttgc tgcacaggca gacgagcacg
     1681 ccgcgctgcg acaggcgcac gagcagcgcg tgcagcgcgc gatggccggc gtcgaactcc
     1741 acaccctcgg ggccctgttc gccgacgacg ccgcgccaca gcgtgttgtc gcagtcgacc
     1801 accacgacct tccgcaccgg cgcgatgcga cggtgcacgt gccgggcgac gagcgcggcc
     1861 agcacgtgca ggtagtcgtc gacgtacggg atgtgcgcga tgtggtcccg gagctcgtcg
     1921 tggacctcgt cctcgttgac gtcgtacacc tggtggaact gcgtgaccgg gacgacctgc
     1981 agccccgcca cgccggccag cgacgcggcg atcgtctctt cggtctgccg cacgaggatg
     2041 cgctcggccg acgacgacaa gccgtacgac gggcagatca ggagcgtcgt ctcgttcgac
     2101 gcctgcgcgc ggtgcgcgcg gacggccttc tcgaaatcgc gcgtcgtgtg ctgcaggtat
     2161 tcacgcaccc gctcgatgtc tgccacgtgt tcgtcgggca gctcgcgaag ccagtcctgc
     2221 acccggagca ggagcacatt ggctccgcgg ccgcgcgcgt tgagcacgct gcctgggtcg
     2281 agtagcgact ggagctgctg cccgtacgga gccgcctcga tggcggcgtc gagcgccagc
     2341 tccttcatcc agaactcgac ggcggggatc agcggatccg tcgtgaaact ggccgcgatc
     2401 cgtacagaga agtcggccga caatgtcatc gtgcggcggt agtggtcatc gggcggtgat
     2461 tctgccaact tctgctaatt ccaagccccg tgccacgcag ccgcggcaat cgcgcgaagc
     2521 aacggcacgt tctaggggcg agactgggcc cggcgccgcg cgagagacag aaatcctaga
     2581 ataggctgac ttctttcggg ca
//
LOCUS       DASSYW010001046         6022 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_416376, whole genome shotgun sequence.
ACCESSION   DASSYW010001046 DASSYW010000000
VERSION     DASSYW010001046.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 6022)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6022)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6022
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_416376"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..906)
                     /locus_tag="VFN38_16515"
     CDS             complement(<1..906)
                     /locus_tag="VFN38_16515"
                     /inference="COORDINATES: protein motif:HMM:NF017081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MASE1 domain-containing protein"
                     /protein_id="HET9013430.1"
                     /translation="MDRPADRPNPAPAARVPGWDMRIAGVLFLGWIVLARAGPMLEIA
                     PGVRAWYPPAALLAAACIMWGLRALLPIVAASSALLIALPVSYEPLWRVLVVSAFLKL
                     VYWAATFALKRWPFDCTFSTPVDVARFGAIFVLAGGTAALLNTLDLVGLDGTLQAQGW
                     LLLRGFWIGDVVAVIALAPAIIVASHWVSEARGTSVVATLESLRARWSPGLALRMLSI
                     PVALLVAAALAPSVGFFAFALCFLPLGWIALSYGARVAALANVVLTVGAVSLVHGSAL
                     VAPKGLEVQAFIGMLALTGLLVGSVA"
     gene            complement(1071..1143)
                     /locus_tag="VFN38_16520"
     tRNA            complement(1071..1143)
                     /locus_tag="VFN38_16520"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1108..1110),aa:Ala,seq:tgc)
     gene            1197..1652
                     /gene="trxA"
                     /locus_tag="VFN38_16525"
     CDS             1197..1652
                     /gene="trxA"
                     /locus_tag="VFN38_16525"
                     /inference="COORDINATES: protein motif:HMM:NF012314.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HET9013431.1"
                     /translation="MPSTPAADATATRKITIRCASCGRWNRIDVQRATAGPKCGACGS
                     AIALDHPVTLDDDSFDRVIAGTDLPVLVDFYADWCGPCRMMAPAVDELARTTIGLALI
                     AKLDTDAAQRVASRFQIRGIPTTIVFRNGREARRQTGAAPLATLRALLD"
     gene            complement(1674..2801)
                     /locus_tag="VFN38_16530"
     CDS             complement(1674..2801)
                     /locus_tag="VFN38_16530"
                     /inference="COORDINATES: protein motif:HMM:NF014427.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HET9013432.1"
                     /translation="MPTLLALVATLAVDAACSSSGVSSVLADPPSVASVQIAPSPVSL
                     AAGASVQLTAAVLDAAGAALTGRTVSWTTGDATIAQVSGSGMLAALKAGSTTVTATSE
                     GHAAQAVVSVTTTPAPPPPPPPAPSPTVDTIFADGFETGTLKTTYADIGAGNHVVVTD
                     AAFAHGGSHYLDVTYPAGSEAAGWLTRFFMPGYDSIYVRAWVRESAGWKGWTKLVQLA
                     GSRTDDQWSAMGQAGVCPTGTDFFLTMMVLQPGSGEPAPLNFYTYYPGIPHSGTTCYG
                     TDGREAGATYFPPLTVTADSWHKLEFWVKLNTPGQSNGLQRIWLDGRLIGEWKNAVLR
                     NSSILKLNSIMLTFSICCGGPPQQQHLYFDDVVVSSRMPVP"
     gene            complement(3076..4401)
                     /locus_tag="VFN38_16535"
     CDS             complement(3076..4401)
                     /locus_tag="VFN38_16535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013433.1"
                     /translation="MSLHPQPVPTRDDLVAAYSKPLPKALGTICLVLAAIGALAFLVG
                     LFVAPDRAWRAYHFNWLYFTALSSAGVMFVAVQRITTARWSRPIIRFMEGYVAFLPVA
                     LVMLLISVLLGKGHIFPWTHEAAPVPEKVIWYNGGFLTARVLVAFLVITTLSLWFVYT
                     SVRLDVGILPEAGARWAAGLRARMRNGFRDERRELHSTHSLQGKLAVFLALAFGYGWS
                     VLAFDLSMGLSLHFQSTLYGWWFFMGGWLCSLTLFTLLVLAWRRFLHADALIGENHFH
                     DLGKLCFAFTAFWGYLTFGQYLVIWYGNMGEETHWPRLRLIEPWVGLSVSAVIMVFFA
                     PFFGLLSRAAKTFHPTLALFTGISLAGMWLVRYLEVYPSLYGVAPHAPMGIWEIAITL
                     GYIGIWGLCYMAFMNAFPRMRVLLMTSPYRDEVQVPVNPETMEPLPAHE"
     gene            complement(4398..5207)
                     /locus_tag="VFN38_16540"
     CDS             complement(4398..5207)
                     /locus_tag="VFN38_16540"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HET9013434.1"
                     /translation="MNDRLTRAAQRLALLSVVTVLGACSWFTDFKQQPKMDPWESPSD
                     TIPMRGNPQFSVSVYGSAAPGYAVSRIALPGTIDSMAPIPNPVPADARSLHNGRMYYQ
                     INCAVCHGEAGKGDGPILAAKAIFPPPLVGPAAEGRSDGYIWGIMRNGRGAMPSYNRI
                     EEMDRWDVVNYVRGLQGKYQVAVGPVGLPGETGDKVPGYSQMGPTRPSPYWHHAGAQA
                     GPTRGGVTPSGAAATPAAPTDSAHAPAPAADSARPAAPSTTTTTPKTGGER"
     gene            complement(5197..5697)
                     /locus_tag="VFN38_16545"
     CDS             complement(5197..5697)
                     /locus_tag="VFN38_16545"
                     /inference="COORDINATES: protein motif:HMM:NF023249.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3341 domain-containing protein"
                     /protein_id="HET9013435.1"
                     /translation="MQGVLAAFAEIDSAVEAIHDLRKKNFGDITVFTPTPRHEFEEAL
                     EPPTSGVRRFTLIGGLLGVTFGYWVAIWISDYWPIVVGGKPVASWVPYTIIGFELMVL
                     FGSLSTVFGMFALSRIPRLTMTVGYDPRFSHGDYGIWVVAGPDRAAEAAAVLRDHGAL
                     EVRNER"
     gene            complement(5697..>6022)
                     /locus_tag="VFN38_16550"
     CDS             complement(5697..>6022)
                     /locus_tag="VFN38_16550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013436.1"
                     /translation="TTWLFILSIFINIGMWFERFVIVIPSLSHEFEPWQWGSYAPTWV
                     DYSILLGSFGWFFMWFLLFIRQLPVMAISEVKEIIPPKRRVYEDHSHDLDALVIDPTT
                     TMGDD"
BASE COUNT         1039 a         1993 c         2201 g          789 t
ORIGIN      
        1 ggcgacgctg ccgacgagca gtccggtgag cgcgagcatc ccgatgaatg cctggacctc
       61 gagtcccttg ggggcgacga gcgcgctgcc gtgcacgagg gagacggcgc cgaccgtcag
      121 cacgacgttc gcgagcgccg ccacgcgcgc gccgtaggaa agcgcgatcc atccgagcgg
      181 caggaagcag agggcgaacg cgaagaagcc cacgctcggc gccagcgccg cggcgacgag
      241 gagcgcgacc gggatgctca gcatccgcag ggcgaggccg ggtgaccacc gggcacggag
      301 cgactcgagc gtcgcgacga cggaggtgcc ccgcgcctcg ctcacccaat gggacgcgac
      361 gatgatcgcc ggcgccaggg cgatcacggc gacgacgtcg ccgatccaga acccgcggag
      421 cagcagccag ccctgcgcct gcagcgttcc gtcgaggccg acgaggtcga gcgtgttgag
      481 gagggcggcc gtgccgccgg cgagcacgaa gatggcgccg aagcgggcga cgtcgacggg
      541 ggtggagaag gtgcagtcga acggccaccg cttcagggcg aaggtcgcgg cccagtagac
      601 gagcttgagg aacgccgaga cgacgagcac gcgccagagc ggctcgtacg agacgggcag
      661 cgcgatcagc agggcgctcg aggcggccac gatcggcagg agcgcgcgga gcccccacat
      721 gatgcaggcg gcggcgagca gggcggcggg gggataccac gcacgcacac ccggcgcgat
      781 ctcgagcatc ggaccggctc gcgccagcac gatccagccg aggaagagga cgccggcgat
      841 gcgcatgtcc caccccggca cgcgtgcggc tggcgctggg ttggggcggt cggcagggcg
      901 atccatgcgg agggggtcgg agcgtgccgg agggtccgcg agcgcggggc aggacgaccc
      961 ggtgcgggga tggcgggtcg ggcgctgcgt ggcaccgatg agaggacgac cgagcggccc
     1021 gagggattcg cactcggcac cacggcacca cggacgggac gtttccggag tggagcgtat
     1081 cgggatcgaa ccgatgacct cctgcttgca aagcaggcgc tctcccagct gagctaacgc
     1141 cccggaactt gcagacgacg caaggtaacg cgccacgccc cgagggagaa gcgaccatgc
     1201 cgagcacgcc cgccgccgac gccacggcga cccggaagat cacgattcgg tgcgcctcgt
     1261 gcggccgatg gaatcgcatc gatgtgcagc gcgccacggc gggccccaag tgcggcgcct
     1321 gcgggtcggc gatcgcgctc gatcatcccg tgacgctgga cgacgactcg ttcgaccgcg
     1381 tgatcgccgg gacggacctg ccggtcctgg tggatttcta cgccgactgg tgtggcccgt
     1441 gccggatgat ggcgcccgcc gtggacgagc tcgcgcgcac gacgatcggg cttgcgctca
     1501 tcgcgaagct cgacaccgac gcggcgcaac gcgtcgcgtc ccgcttccag attcgcggca
     1561 tcccgacgac gatcgtcttc cgcaacgggc gcgaggccag gcgacagacc ggcgcggcgc
     1621 cactggcgac gctgcgcgcg ctgctcgact gaggcgcgcc cgacgcgtgt gcgtcagggc
     1681 acgggcatgc gcgacgagac gacgacgtcg tcgaagtaca ggtgctgctg ctggggcggc
     1741 ccgccgcagc agatgctgaa cgtcagcatg atgctgttga gcttcaggat gctgctgttc
     1801 cgcaggacgg cgttcttcca ctcgccgatc agccgtccgt ccagccagat ccgctgcagc
     1861 ccgttcgact ggccgggcgt gttgagcttc acccagaact cgagcttgtg ccagctgtcg
     1921 gccgtgacgg tgagcggcgg aaagtaggtg gcgcccgctt ccctgccgtc ggtcccgtag
     1981 caggtggtgc cgctgtgcgg gatgccggga tagtacgtgt agaagttcag cggcgccggc
     2041 tcgcccgacc ccggctgcag gaccatcatc gtgaggaaga agtcggtgcc cgtgggacag
     2101 acgccggcct ggcccatggc ggaccactga tcgtcggtgc gcgagccggc gagctgcacg
     2161 agcttcgtcc agcccttcca gccggcggat tcgcgcaccc acgcgcgcac gtagatggag
     2221 tcgtagccgg gcatgaagaa gcgggtcagc cacccggcgg cctcggaacc ggcgggatag
     2281 gtgacgtcca gatagtggct gcccccgtgc gcgaaggccg cgtcggtgac gacgacgtga
     2341 ttccccgcgc cgatgtcggc gtacgtcgtc ttcagcgtgc ccgtctcgaa tccatcggcg
     2401 aagatcgtgt cgaccgtcgg cgaaggcgcc ggcgggggcg ggggcggggg ggcgggcgtc
     2461 gtggtgacgc tcaccacggc ctgcgccgcg tgtccctcgg aggtcgccgt gacggtggtc
     2521 gaccccgcct tcagcgccgc gagcatcccg gatcccgaca cctgcgcgat ggtcgcgtcg
     2581 ccggtcgtcc aggacaccgt gcggccggtg agcgcggcgc cggccgcatc gagcaccgcc
     2641 gcggtgagct ggacggaggc gccggccgcg aggctcaccg gagacggcgc gatctgcacc
     2701 gaggccacgc tcggcggatc ggcgaggacc gacgaaacgc ccgacgacga gcacgccgcg
     2761 tcgacggcga gcgtggcgac gagcgccagg agcgtcggca tggcgacacg cttcgatgaa
     2821 cgctggtaag tcatggtatg ctccctcgac gagtcctcga accgacggcg gcctggccgt
     2881 ttcgccggcg cgacggtgac gttcgaaagc tagcggcggc cggcgaaacc ccgcgtatcg
     2941 tgaatcacga cgcacggggc ccgcaggtca catgtcgcgt cgcgatcggt gacgcgcgca
     3001 cacaaacaaa cggcggcaca ccagagcctg gtgtgccgcc gtcgtcactg cgtcgtgatc
     3061 gccgcttcgc cgcgcctact cgtgcgcggg cagcggctcc atcgtctcgg gattcaccgg
     3121 cacctgcacc tcgtcgcgat acggcgacgt catgagcagc acgcgcatgc gcgggaaggc
     3181 gttcatgaac gccatgtagc agagccccca gatgccgatg taaccgagtg tgatcgcgat
     3241 ctcccagatc cccatcggcg cgtgcggcgc gacgccgtac agcgagggat agacctcgag
     3301 ataccgcacg agccacatgc cggcgaggct gatgcccgtg aagagcgcga gcgtgggatg
     3361 gaaggtcttg gcggcgcgcg agagcaggcc gaagaacggc gcgaagaaca ccatgatcac
     3421 ggccgagacc gagagtccca cccacggctc gatcaggcgg aggcgcggcc agtgcgtctc
     3481 ctcgcccatg ttgccgtacc agatgacgag gtactgcccg aaggtgaggt agccccagaa
     3541 cgccgtgaag gcgaagcaga gctttccgag atcgtggaag tgattctcgc cgatcagcgc
     3601 gtccgcgtgc aggaagcggc gccacgccag cacgagcagg gtgaacaggg tgagggagca
     3661 gagccagccg cccatgaaga accaccaccc gtacagcgtg ctctggaagt gcagcgacaa
     3721 tcccatggag agatcgaagg cgagcaccga ccagccgtac ccgaaggcga gcgcgaggaa
     3781 gacggcgagc ttgccctgga gcgaatgagt gctgtgcagc tctcggcgct cgtcgcggaa
     3841 gccgttgcgc atgcgcgccc gcaggccggc cgcccagcgg gctcccgcct ccggcaggat
     3901 gccgacgtcg agccgcaccg aggtgtagac gaaccagagc gagagcgtgg tgatgacgag
     3961 gaaggcgacc agcacgcgcg ccgtgaggaa gccgccgttg taccagatga ccttctccgg
     4021 cacgggcgcc gcttcgtggg tccacgggaa gatgtgcccc ttgccgagca gcacgctgat
     4081 caggagcatc acgagcgcga cgggcaggaa ggcgacgtag ccttccatga agcggatgat
     4141 cggccgcgac catcgcgccg tggtgatgcg ctggactgcg acgaacatca ctcccgcaga
     4201 cgacagcgcg gtgaagtaca gccagttgaa gtggtacgcg cgccaggcgc ggtccggcgc
     4261 gacgaacagc ccgacgagga aggcgagcgc gccgatcgcg gcgagcacga ggcagatcgt
     4321 gcccagcgcc ttcggcagcg gcttgctgta ggcggcgacg agatcgtcgc gcgtcggaac
     4381 gggttgggga tgcaggctca ccgctcgcct ccggttttcg gcgtcgtcgt ggtcgtggaa
     4441 ggcgcggccg gccgcgcgct gtccgccgcg ggggcgggcg cgtgcgccga gtccgtcggt
     4501 gccgccggcg tggcagcggc gccggacggc gtcacgccac cgcgcgtcgg tcccgcctgc
     4561 gcgcccgcgt gatgccagta gggcgacgga cgggtggggc ccatctgcga atagcccggc
     4621 accttgtcac cggtctcgcc gggcaggccg accggtccga ccgcgacctg gtacttcccc
     4681 tggagcccgc ggacgtagtt gaccacgtcc cagcggtcca tctcctcgat gcggttgtac
     4741 gacggcatcg cgccgcggcc attccgcatg atcccccaga tgtagccgtc gctgcgtccc
     4801 tcggccgccg ggccgacgag cggcggcggg aagatcgcct tcgcggccag gatcggtccg
     4861 tcgcccttgc cggcctcgcc gtggcagacg gcgcagttga tctggtagta catgcggccg
     4921 ttgtgcagcg agcgggcatc ggccggcacg ggattcggga tgggggccat ggagtcgatc
     4981 gtgccgggca gcgcgatgcg cgacacggcg tagcccggcg ccgcgctccc gtacaccgac
     5041 accgagaact gcgggttgcc gcgcatcggg atcgtgtcgc tcggcgactc ccacgggtcc
     5101 atcttgggct gctgcttgaa gtcggtgaac caggagcagg cgcccagcac cgtgacgacc
     5161 gagagcaggg cgagccgctg cgcggcgcgc gtgagcctat cgttcattgc gtacctcgag
     5221 cgcgccatgg tcgcgcagca ccgcggccgc ctcggccgcg cgatcgggac cggcgacgac
     5281 ccagatgccg taatcgccgt ggctgaagcg ggggtcgtag cccacggtca tcgtgagccg
     5341 ggggatgcgc gacagcgcga acatgccgaa caccgtggag agcgagccga acagcaccat
     5401 cagctcgaac ccgatgatcg tgtacggcac ccagctcgcc accggcttgc cgccgacgac
     5461 gatcggccag tagtccgaga tccagatggc gacccagtac ccgaaggtca cgccgagcag
     5521 gccgccgatg agggtgaagc gccggacgcc gctcgtgggc ggctcgagcg cttcctcgaa
     5581 ctcgtgccgc ggcgtcgggg tgaacacggt gatgtcgccg aagttcttct tgcggagatc
     5641 gtggatcgcc tccacggcgg agtcgatctc ggcgaaggct gccagcacgc cctgcatcag
     5701 tcgtctccca tggtggtggt gggatcgatc acgagcgcgt cgagatcgtg cgagtgatcc
     5761 tcgtacacgc ggcgcttggg cgggatgatc tccttcacct cggagatcgc catcaccggc
     5821 agctgccgga tgaacagcag gaaccacatg aagaaccagc cgaacgagcc gagcaggatc
     5881 gagtagtcca cccacgtggg cgcatagctg ccccactgcc agggctcgaa ctcgtgcgag
     5941 agcgacggga tgacgatgac gaaccgctcg aaccacatcc cgatgttgat gaagatcgag
     6001 aggatgaaaa gccacgtcgt gt
//
LOCUS       DASSYW010001047         2462 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_66444, whole genome shotgun sequence.
ACCESSION   DASSYW010001047 DASSYW010000000
VERSION     DASSYW010001047.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2462)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2462)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2462
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66444"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2231
                     /locus_tag="VFN38_16555"
     CDS             <1..2231
                     /locus_tag="VFN38_16555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013437.1"
                     /translation="DNRSDMFATGALLFEMATGTQPFRGGTPGDLAAAIAGEAPPRPR
                     KLNPRLPGSIEKIILRCLEKDPDRRYQSAIDLRDDLHRARRGLDAAARLSAPLSRPRV
                     RTALLAAVPVVVLLALAGSARWWWRGTPGNVERSTILVSHIANGTADRDFDGTLRQAV
                     TVYLAQSPYLDLVSDERIRATLQLMGREPDARMPHDVAIEVCQRLGLQAMLEGSVSAI
                     GASTVVALVASDCGSGATVARKQVEVHRKEDVLRAMGSLTASIRQSLGESVTSLAGHN
                     VPIEEATTPSMDALKAYTEAVARRAAGSEMDAAALLERAIKIDPQFALAYTTLSSIFG
                     GFGETGPSEKYARLAYEHRSRVSERERLFITYQYHDRVTGDQLKAREALEVWKATYPR
                     DYRPPNALAVLLNRLGDYTGAVREATEAARRNPAHAFPLSNLAFAYRGAGQFDKARTV
                     VDEALGRGLETAPMRRLRYQLAELENDRAAAQRQVDWAAGRTRSFDMTGARAQVAAFR
                     GQIGDARRLYAETIKEATDRGFPQVASGYAAQAAMTDALYGYTREAIAGAHDVLRVAT
                     AYEPQIKAATALALAGAPDEGEAVIRRLRNVRPGDTLLQAVYLPVAEAAVLLARGRSE
                     AAIDTLRRASQYEQGTVAALAPVYLRGDARLRAGASQPAAEEYRAVLEHRGADPFSPF
                     VPLSHLGAARALARTGARDDSRRAYEALLRTWAAADADLPVLRGARAELARLTGPDTA
                     AR"
     gene            2283..>2462
                     /locus_tag="VFN38_16560"
     CDS             2283..>2462
                     /locus_tag="VFN38_16560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013438.1"
                     /translation="MTPTKITLPESEIPTHFYNIVPDLPTAPAPPLNPGTREPIGPEA
                     LAPIFPMELIAQEVSQ"
BASE COUNT          380 a          873 c          872 g          337 t
ORIGIN      
        1 gtgacaaccg cagcgacatg ttcgcgaccg gcgcgctgct gttcgagatg gcgacgggta
       61 cccagccatt ccgcggcggc acccccgggg acctggcggc ggcgatcgcc ggggaggccc
      121 cgccgcggcc gcgcaagctg aacccacggc tgccgggatc gatcgaaaag atcattctgc
      181 gctgcctcga gaaggatccg gatcgacggt atcagtcggc gatcgacctg cgcgacgacc
      241 tccatcgcgc ccggcgcggc ctcgacgccg cggcccggct gtcggcgccg ctgtcgcggc
      301 cgcgcgtgcg tacggcgctg ctggccgccg tgcccgtcgt cgtactgctc gcgctggccg
      361 gatcggcgcg ctggtggtgg cgcggcactc cgggaaacgt ggagcggagc acaatcctcg
      421 tgagccacat cgcgaacggc accgccgatc gcgacttcga cggaacgctc cgtcaggcgg
      481 tcaccgtcta cctggcgcag tcgccgtacc tcgatctcgt ctcggatgaa cgcattcgag
      541 ccacgctgca gctgatgggg cgcgagccgg acgcccgcat gccgcacgac gtggccatcg
      601 aagtgtgcca gcggctgggg ctgcaggcga tgctcgaggg cagcgtgtcg gcaatcgggg
      661 cctcgacggt ggtcgcgctg gtggccagcg actgcggcag cggcgcgacc gtcgcccgca
      721 agcaggtgga ggtgcatcgc aaggaggacg tgctgcgcgc gatgggcagc ctcacggcat
      781 cgattcgcca gtcactcggt gaatcggtca cgtctctggc gggacacaac gtccctatcg
      841 aagaggccac gaccccgtcg atggacgcgt tgaaggcata cacggaagcg gtggccagac
      901 gggcggcagg atcggagatg gatgccgccg cgctgctcga gcgtgcgatc aagatcgacc
      961 cgcagttcgc gctcgcctac acgacgctgt cgagcatctt cggcgggttc ggcgagacgg
     1021 gtccgagcga gaagtacgcg cggctcgcgt acgagcaccg atcgagggtc agcgagcgcg
     1081 agcgcctgtt catcacgtac cagtaccacg atcgcgtcac gggcgatcag ttgaaggcgc
     1141 gcgaggcgct cgaagtctgg aaggcgacct atccgcgcga ctatcgtccg ccgaacgcgc
     1201 tcgccgtctt gctgaaccgc cttggcgatt acaccggcgc agttcgggag gccacggagg
     1261 cggcgcgacg aaatccggcg cacgcctttc cgctttcgaa tctcgcgttc gcgtatcgcg
     1321 gtgccggcca attcgacaag gcgcgcaccg tcgtggacga ggcgctcggc cgcggcctcg
     1381 agactgcgcc gatgcggcgc cttcgctacc agctcgcgga actggagaac gaccgcgctg
     1441 ccgcgcagcg gcaggtcgac tgggcggcgg gccgcacgcg cagcttcgac atgaccggtg
     1501 cccgggctca ggtcgccgcc tttcgcgggc agatcggcga cgcgcgccgt ttgtacgccg
     1561 agacgatcaa ggaggccacg gaccgcggtt ttccgcaggt cgcctccggg tacgcggcgc
     1621 aggcggcaat gaccgacgcc ctctacggct acacccggga ggcgatcgcc ggcgcacacg
     1681 acgtgctccg ggtggccacc gcgtacgagc cgcagatcaa ggcggcaacc gccctggcac
     1741 tcgctggagc gccggacgaa ggtgaagcgg tgattcgccg gcttcggaac gtgcggcccg
     1801 gcgacacact gctgcaggcc gtctatctgc cggtcgcgga agcagccgtc ctcctcgccc
     1861 gcggccggtc cgaggcggcg atcgacacgc tgcgccgtgc gtcccaatac gaacagggga
     1921 cggtggcggc gctggcccca gtgtacctcc gcggcgacgc acgtctgcgt gcgggggcgt
     1981 cacagccggc cgccgaggag taccgcgcgg tcctggagca ccggggcgcc gatccgttct
     2041 ctccattcgt gccgctctcg catctcggcg ccgcgcgcgc gctggcgcgc accggcgcgc
     2101 gcgacgacag ccggagggcc tacgaagcgc tgctgcggac gtgggcggcg gctgacgccg
     2161 acttgccggt actgcgcggc gcccgcgcgg agctcgcacg cctcaccggc cccgacaccg
     2221 ccgcgcgttg acacgcgtcc ggccgcggca ataccgtgtg gcagcctgga gaggacctgc
     2281 ccatgacgcc gaccaagatc acgctgcccg agtccgaaat ccccacgcac ttctacaaca
     2341 tcgtccccga cctgccgacg gcgcccgccc cgccgctgaa tcccgggacc cgggaaccga
     2401 tcggccccga ggcgctggcc ccgatcttcc cgatggaact gatcgcgcag gaggtgtcgc
     2461 ag
//
LOCUS       DASSYW010001048         4863 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1392836, whole genome shotgun sequence.
ACCESSION   DASSYW010001048 DASSYW010000000
VERSION     DASSYW010001048.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4863)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4863)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4863
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1392836"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            355..996
                     /locus_tag="VFN38_16565"
     CDS             355..996
                     /locus_tag="VFN38_16565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013439.1"
                     /translation="MTVLTGCSDTVVSPAAAPSAPTTMMQAPVGHPNLSLTGGAAQNT
                     SADFTVSPWGGVYFVGNHAVVFPAHSICDPATSGYGSDVWDAPCSPSETGVAIHAEVR
                     TQNGRTWVDFSPELRFVPSTNPTRWVWMVMSTPQARGAQGDLSSFNIVYAESIGGLTV
                     DDAASDPTLRTYVDTFTGTAFRRIKHFSGYAGTIGFTCDANVEDCGATDNPTP"
     gene            1173..1622
                     /locus_tag="VFN38_16570"
     CDS             1173..1622
                     /locus_tag="VFN38_16570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013440.1"
                     /translation="MQRGLAAGVVAGAAALGLLIGIGRRAGTAWRPVNAAAHGILGAR
                     ADDVWSFDGSVTPAGGLVVLVMGVVAGFVVARIAPTFRTLHVAMTSVGVALIGYLLHV
                     HVVARTPGGLAALLSVGELRGLYVTLGCALAVGMRLAFFTVAKASEP"
     gene            1819..2364
                     /locus_tag="VFN38_16575"
     CDS             1819..2364
                     /locus_tag="VFN38_16575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013441.1"
                     /translation="MDILVMLEENPDHSPVLAHVNSVPSPLATERPARDIVTLYGVPS
                     AELLALALAAAVESRRTGEGHNNQDAIRHLGVFSERGAIGDAAWRDVGTGELVTRDLE
                     IPLSILQGTATQLLSECGQLIRRLVAGLSMPDWPEGARRNITISLGPVVGLAAPVLAP
                     LESMLDRLREGDAMAYDYEGD"
     gene            2708..4816
                     /locus_tag="VFN38_16580"
     CDS             2708..4816
                     /locus_tag="VFN38_16580"
                     /inference="COORDINATES: protein motif:HMM:NF009381.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HET9013442.1"
                     /translation="MREYRGSAIRNIAVVGHGASGKTSLVDALAFVSGSSKRHGSVSD
                     GTTLTDTAPEEIERGYSISLGCAHAEWMDSKINLLDTPGFLDFQGDAIGGLAAADGAL
                     CVVSATAGVEVGTERMFREAVSRRDPVLFVVTMMDKEHADFDALYRQIKTRLTNKVIP
                     IEVPVGEGPDFHGIVNLFDKRAHVYARGGRSGAYEETDVPDEVRPQFDRYYAELIETI
                     AATDDTLLERYLNGDEIGRDEAIGAMKEAMKRMELFPLFCVSSTLNYGTRAVLSTIVE
                     LMPNAYEMEELHAFTGAEGNQTVQIHANDDAPFAALVFKTQSEPHVGDVTYFRVLSGA
                     ARNGDEVYNATRDATEKLNHLAIPQGRERLEVTALHAGDVGCVAKLRGTHTNDTLSTR
                     AHPVRLPEIRFPVPLVQMAIHPTNRADEEKLQAGLHRLHEEDPSFDTEYNAETHETLV
                     SGLGERHLEVALAKLKRKFGVVAELSKPKIAYRETIRLRAEGQGRHKKQSGGRGQFGD
                     CWVRIAPAERGDGIRFEDRIVGGAIPSKFIPAVEKGIHEAAERGVLAGFPLVDFQVEL
                     FDGSYHTVDSNEMSFKMAGIQAFKAVAPKCKPVLLEPLDELEIVTPEESLGDVLGDLS
                     ARRGQILGTDSAADLPGTRVRAVVPQSELHLYASALQSMTHGRAVFNRHFRGYEEMPP
                     DAAQRVVNEGAKEQSDTHAH"
BASE COUNT          786 a         1619 c         1683 g          775 t
ORIGIN      
        1 gcggagttcg gggacgagct tcggcctttt gccggtgacg tcgtgcaggt ggcgatcgag
       61 cgttatgcga cccgtccgga ggttttgggc aatccgaaga ttcgcgatcg tctcactgta
      121 ctgttaattg acagcaaatc cactattgac cgatcctgac gggttcggta gactttgtgg
      181 agcaacagaa caaggggtgt gcgccgatgt cggtggcacg cgcctcctat agattcacca
      241 cgccgttcgg agtgcttgcc gccattcatc ggcgggcgta cccggacgct caccgcgcct
      301 cgcggggtag ctatgcgtcg caactattgg gtcgtcgtcg ccagcatggt agtgatgacc
      361 gttctcacgg gctgctcgga caccgtcgtc tcgccggcgg ctgcgccgag tgcgccgacg
      421 acgatgatgc aggcgccggt cggccacccg aacctgagcc tcactggggg tgccgcgcag
      481 aatacgtcgg ccgacttcac ggtgagcccg tggggcggcg tgtacttcgt cggcaatcac
      541 gcggtcgtct tcccggctca cagcatctgc gatccggcca cgagcggtta cggttccgat
      601 gtctgggacg cgccgtgctc gccgagcgag acgggcgttg cgatccatgc cgaagtgaga
      661 acgcagaacg gtcgcacctg ggtggatttc tcgccggagc tccggttcgt cccgtcgacg
      721 aatccgacgc gctgggtctg gatggtgatg agcacgccgc aggcgcgcgg cgcccagggc
      781 gatctgtcgt ccttcaacat cgtctacgcc gagagcatcg gcggcctgac ggtcgacgac
      841 gcggcgagtg atcccacgct gcgcacgtac gtggatacct tcacgggcac cgcgttccgc
      901 cgcatcaagc acttcagcgg ttacgccggc accatcggct tcacctgcga tgcgaacgtc
      961 gaggattgcg gcgccacgga caacccgacg ccgtaatcgg ccggcagtgc gaatcgagca
     1021 taatgaacgc gcccgccctc gagcgggcgc gttcattatg tggcatgtcg attccgcgaa
     1081 gacgtcgcca cgaccccggc gcatgagccg tccctctcgc cccggggtcc cgcatgagcg
     1141 gtgagtggtg gtcctcggcg cgcgtaccgc gcgtgcagcg tggactcgcc gccggcgtcg
     1201 tggcgggtgc ggcggcactg gggctcctga tcggcatcgg gcggcgcgcc ggcactgcct
     1261 ggcgccccgt gaacgccgcg gcgcacggca tcctcggcgc gcgggccgac gacgtgtgga
     1321 gtttcgacgg cagtgtgacg ccggcggggg gtctggtggt tcttgtcatg ggcgtggtgg
     1381 cgggattcgt cgtcgcgcga attgcaccaa cctttcgcac tttgcacgtc gcgatgacgt
     1441 cggttggggt ggcactgatc ggctacctgc tgcacgtcca tgtcgtcgcg agaacgccgg
     1501 gcggcctcgc agcgctgctt tccgtcggcg agttgcgtgg tttgtacgtg acgctcggat
     1561 gcgcgctcgc cgttggtatg cgccttgcct ttttcacggt cgcgaaggcg tccgagccct
     1621 aggcgagtgc gctgatcctg ccgtgtcttc ctcggcacgt gagcgtcatg caagtgtgac
     1681 gtgcggtgag gaactttgtc ggaacggtcg tgttcgagga gaggcgcccg gtggcaccgg
     1741 gcagccgcag tctcctaccg agcccgcccg tcgtgggaca ggcgcaggtc agcgcaggac
     1801 atctttcagg aggggggcat ggacatcctc gtgatgctcg aggaaaaccc cgatcactcg
     1861 ccggtgctcg cgcacgtgaa ctccgttccg tcacccctcg cgaccgaacg tccggcgcgt
     1921 gacatcgtga cgctgtacgg agtgccgagc gccgagttgc tggcgctggc gctggcggcg
     1981 gcggtcgaat cgcgccggac cggggaaggg cacaacaacc aggacgcgat caggcatctt
     2041 ggtgtcttct ctgagcgcgg cgccatcggc gacgcggcgt ggcgcgacgt ggggacggga
     2101 gagctggtga cgcgggacct ggagatcccc ctctcgattc tccagggcac ggccacccag
     2161 ctcctcagcg agtgcgggca gctgatccgc cgcctggtgg ccgggctgtc catgcccgac
     2221 tggccggagg gcgctcggcg caacatcacc atctcgctgg ggcccgtggt cggactggcc
     2281 gctcccgtgc tggcgccgct cgagtcgatg ctcgatcggt tgcgtgaagg tgacgcgatg
     2341 gcgtacgact acgagggcga ctgaccacga acctttctcg tctgcgcacg aaggcccgct
     2401 cggtgatgcc gagcgggcct tttccattgg gccgtcagga agaccctgct tgacaccccc
     2461 cgccctccac ggcatctctc aggtgaccgc aggaggtggg gccatgccac ggctcttcac
     2521 tcaccactcg accgccggaa gagccggcag cgagcgcgtg ttcacggatg accaagggcg
     2581 ccgccggggc gccgcgctca cgaagcgcga tgccccgtgc ggcgcccttg tgcttcgtcc
     2641 ggcccgttcg tggcgccgca acggcccacc ccacggcaca ctcccatagc cggacggagg
     2701 tacgcgaatg cgagagtatc ggggatcggc gattcggaac atcgcggtgg tcggacacgg
     2761 ggcgagcggc aagaccagcc tggtcgatgc gctcgccttc gtgtccggat ccagtaaacg
     2821 ccacggcagc gtcagcgacg gcaccaccct caccgacacc gcgccggaag agatcgagcg
     2881 cggctactcc atcagcctcg gttgcgcgca cgccgagtgg atggactcca agatcaacct
     2941 tctcgacact ccgggcttcc tcgatttcca gggggacgcc atcggcgggc tggctgcagc
     3001 ggacggcgcc ctctgcgtcg tgagcgccac cgccggcgtg gaggtcggca ccgagcggat
     3061 gttccgcgaa gcggtctcgc gccgcgaccc tgtgctcttc gtggtcacga tgatggacaa
     3121 ggagcacgcc gatttcgatg cgctctatcg gcagatcaag acccgcctca ccaacaaggt
     3181 catccccatc gaggtgccgg tcggcgaggg gccggacttc cacggcatcg tgaacctgtt
     3241 cgacaagcgg gcgcacgtgt acgcacgggg cggccggagc ggcgcctacg aggagaccga
     3301 cgtccccgac gaggtgcgcc cgcagttcga tcgctattac gcggagctga tcgagaccat
     3361 cgccgcgacc gacgacaccc tgctcgagcg ctacctgaac ggcgacgaga tcggacgcga
     3421 cgaggcgatc ggcgcgatga aggaagcgat gaagcgcatg gagctctttc cgctcttctg
     3481 cgtgtcctcc acgctcaact acggcacgcg cgccgtgctc tccacgatcg tggagctcat
     3541 gccgaacgcg tacgagatgg aagagctcca tgcgttcacc ggcgcggagg ggaaccagac
     3601 ggtccagatc cacgcgaacg acgacgcacc gttcgccgcg ctggtgttca agacgcagag
     3661 cgagccgcac gtcggcgacg tgacctactt ccgcgtgctc tccggcgcgg cgcgcaacgg
     3721 cgacgaggtg tacaacgcca cgcgcgacgc caccgagaag ctcaaccacc tcgcgatccc
     3781 gcagggccgc gagcgactcg aggtgaccgc gctccacgcc ggcgacgtcg ggtgcgtggc
     3841 caagctgcgc ggcacgcaca ccaacgacac actctccacg cgggcccatc ccgtccgtct
     3901 ccccgagatc cgctttcccg tcccgctcgt gcagatggcg atccatccga cgaatcgcgc
     3961 cgacgaggag aagctccagg cggggctgca ccgactgcac gaggaggacc cgtcgttcga
     4021 cacggagtac aacgccgaga cgcacgagac gctcgtgtcg gggctcggcg agcggcatct
     4081 ggaggtcgcg ctggccaagc tgaagcggaa gttcggcgtc gtggccgagc tgagcaaacc
     4141 gaagatcgcg tatcgcgaga cgatccgcct gcgcgccgag gggcaggggc gtcacaagaa
     4201 gcagtcgggc ggccgcggcc aattcggcga ctgctgggtg cggatcgccc ccgccgagcg
     4261 cggcgacggc atccgcttcg aggaccgcat cgtgggcgga gcgatcccga gcaagttcat
     4321 accggccgtg gagaagggca tccacgaggc cgccgagcgc ggcgtgctgg ccggcttccc
     4381 gctggtggac ttccaggtgg agctgttcga cggctcgtac cacaccgtgg actcgaacga
     4441 gatgtcgttc aagatggccg gcatccaggc gttcaaggcg gtcgcgccca agtgcaagcc
     4501 cgtgctgctc gagccgctcg acgagctcga gatcgtgacg ccagaggagt cgctcggcga
     4561 cgtgctcggc gacctgtcgg cacggcgggg ccagatcctc ggcaccgact ccgcggccga
     4621 cctgcccggg acgcgcgtgc gcgcggtggt gccgcagtcc gagctgcatc tctacgcgag
     4681 cgccctgcag tccatgaccc acggccgcgc ggtgttcaac cggcacttcc gcggctacga
     4741 ggagatgccg cccgacgcgg cgcagcgcgt cgtgaacgag ggggcgaagg aacagtcgga
     4801 tacgcacgcg cactgagcgc gcgagaaaca cggcggggcg ccgaggaatt cctcggcgcc
     4861 ccg
//
LOCUS       DASSYW010001049         2911 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1798245, whole genome shotgun sequence.
ACCESSION   DASSYW010001049 DASSYW010000000
VERSION     DASSYW010001049.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2911)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2911)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2911
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1798245"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..768)
                     /locus_tag="VFN38_16585"
     CDS             complement(<1..768)
                     /locus_tag="VFN38_16585"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HET9013443.1"
                     /translation="MLPDAGSRDAVRLFDLRRNWQALTVRPRFHDPVVDGVRAIAILW
                     VMSYHLVLFHLGSFTTEAIGLATGAWTQWTSRGDMGVDLFFVISGYLIGSILLGEYRG
                     TGAIQIRRFYVRRFLRLIPVYTVAMIVGLYFVHNIPREAVLMEFPPFMNANHMWANVL
                     YVNNFLPINKQYMGWCWSLAIEEQFYLILPGFLLVVMRFARPLRVLGGFLLLAGIIRW
                     IVIDRHGFVPPFLDLPNMQSWVDRFSIEYDNLYTRYGA"
     gene            885..>2911
                     /locus_tag="VFN38_16590"
     CDS             885..>2911
                     /locus_tag="VFN38_16590"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HET9013444.1"
                     /translation="MEPTVYGHYRLDARIGGGGMGEVFRAFDTRLNRHVAVKILREAG
                     GGGAAVVQRFLREARAASALNHPNIVTIHEVGENSQGEQFIVQELIEGRTLRSALEGE
                     LPLASAIDVGRQVARALSAAHAAGIVHRDVKPENIMLRSDGYVKVLDFGLARVVDHQA
                     AERSTRVNLDTEPGTLLGTTPYMSPEQATGVQAGPAADIFALGIVLYEMAAGRRPFVA
                     PSPIAVLAAILSEQPVPLVRLNPEIPAAFDELVHRMLSKEPDRRPSARDVDLELAALL
                     GRDTATELARSGAATPRTTVGREAERAILRRAYGRVKDGQSLLVAIAGEAGIGKTSLI
                     EDFLAELATRPERPIVARGRCSERLAGAEAYLPILEALDSLLHRAGGDSLQTLMKAVA
                     PTWYVQVATRSVEASTMAELRADTSTASQERMKREVGAFFQDISRPRPIVVFLDDLHW
                     ADVSTIDILNYLAGRFADMRVLFLATYRPAEMALTQHPFLGISNNLRLRGVLEEIALG
                     FLEPADVDRYLALQFPEHRFPPDFAAMIHAKTEGSPLFMADLVRYLKDAGGIVEENGA
                     WVLARSLSDLPRDMPESVRSMIARKIEQLEERDRALLVVASVQGHEFDSAIVSEAAEM
                     DPSQVEERLDVLERVHVFVKRGAEHEFPDLTLTLGYTFVHVLYQNMLYASL"
BASE COUNT          492 a          950 c         1026 g          443 t
ORIGIN      
        1 cgcgccgtag cgcgtgtaga ggttgtcgta ctcgatcgag aagcgatcga cccacgactg
       61 catgttcggg agatcgagga acggcggaac gaacccgtgg cggtcgatga cgatccagcg
      121 gatgatcccc gcgagcagca ggaaaccgcc gagcacgcgc agcggcctgg caaaccgcat
      181 cacgaccagc aggaagccgg ggaggatcag atagaactgc tcttcaatcg ccagcgacca
      241 gcaccagccc atgtactgtt tgttgatcgg caggaaattg ttcacgtaga ggacgttcgc
      301 ccacatgtgg ttcgcgttca tgaagggtgg aaactccatg agcaccgcct cgcgcgggat
      361 gttgtggacg aagtagagac cgacgatcat cgccaccgtg tagacgggga tgaggcgcag
      421 gaaacggcgc acgtagaacc gccggatctg gatggcgccg gtgccgcggt actcgccgag
      481 caggatcgag ccaatcaggt agccgctgat cacgaagaag aggtcgacgc ccatgtcgcc
      541 gcggctggtc cactgcgtcc acgcgccggt cgcgaggccg atggcctcgg tcgtgaacga
      601 tccgagatgg aacagcacca ggtgatacga catcacccag aggatggcga tggcgcggac
      661 gccgtcgacg accggatcgt ggaatcgcgg gcggactgtc agcgcttgcc agttgcgtcg
      721 gaggtcgaac aggcggacgg cgtcccggga cccggcgtcg ggcagcatga ccatagaaaa
      781 caggtatgcg gcgattatac ggggcgcgtt tgcgctttgc agaactttct ctgcccgcac
      841 ggatgtatag tgctcgcggg cgctgcccga tttccccaat ccaaatggaa cccacagtct
      901 acgggcatta ccgcctggac gcccgcattg gcggcggcgg catgggcgaa gtgttccgcg
      961 cgttcgatac acggctgaac cgccacgtcg ccgtgaagat cctgcgtgaa gcgggcggcg
     1021 gcggcgcggc ggtcgtccag cgcttcctgc gagaggcgcg cgccgcctcg gcgctcaacc
     1081 atccgaacat cgtcacaatt cacgaggtcg gggagaactc gcagggggaa cagttcatcg
     1141 tccaggagct gatcgagggg cggacgctgc gatcggcgct cgagggcgag ctgccgctcg
     1201 cgagcgcgat cgacgtcggc cgccaggtgg cgcgcgcgct gtcggcggcg cacgccgccg
     1261 gcatcgtcca tcgcgacgtc aagcccgaga acatcatgct gcggtcggac ggctacgtga
     1321 aggtactgga cttcggcctg gcgcgggtcg tcgaccacca ggccgcggag cggtcgacgc
     1381 gcgtcaacct cgataccgag ccgggcaccc ttctcggcac gactccctac atgtcgcccg
     1441 aacaggcgac cggcgtccag gccggccccg ccgcggatat cttcgcgctc ggcatcgtgc
     1501 tctatgagat ggccgcggga cggcggccgt tcgtggcgcc gtcgccgatc gcggtgctgg
     1561 ccgcgatcct gtccgagcag ccggtgccgc tcgtgcgcct caacccggag atccccgcgg
     1621 ccttcgacga gctcgtccac cggatgctct ccaaggagcc cgatcgccgg ccgtccgcca
     1681 gggacgtgga cctcgagctg gcggcgctcc tcggccggga cacggccacg gagctcgccc
     1741 ggtcgggggc ggcgacgccg cgcacgaccg tcgggcgcga agccgagcgc gcgatcctcc
     1801 gccgcgccta cgggcgggtc aaggacggtc agagcctcct ggtcgccatc gccggcgagg
     1861 cggggatcgg caagaccagc ctgatcgagg atttcctggc cgagctggcg acgcggcccg
     1921 agcggccgat cgtcgcgcgc ggccgctgct cggagcggct cgcgggcgcg gaagcgtatc
     1981 tgccgatcct cgaggcgctc gacagcctgc tgcaccgcgc cggcggcgat tcgctgcaga
     2041 cgctgatgaa ggcggtggcg ccgacgtggt acgtgcaggt cgcgacgcgc tcggtcgagg
     2101 cgtcgacgat ggccgaactg cgcgcggata cgtcgacggc gtcgcaggag cgcatgaagc
     2161 gcgaggtcgg cgcgttcttc caggacatct cgcgcccgcg cccgatcgtc gtctttctcg
     2221 acgatctgca ctgggccgac gtctcgacga tcgacatcct gaactacctc gcgggacggt
     2281 tcgccgacat gcgcgtgctg ttcctcgcca cctaccggcc ggcggagatg gcgctgaccc
     2341 agcatccgtt cctggggatc agcaacaacc tgcgcctgcg cggcgtgctc gaggagatcg
     2401 cgctcgggtt cctggagccc gcggacgtcg accgctacct cgcgctgcag ttcccggagc
     2461 accggttccc gccggacttc gcggcgatga tccacgccaa gacggaaggc agcccgctgt
     2521 tcatggccga cctcgtgcgc tacctcaagg acgccggcgg catcgtcgag gagaacggcg
     2581 cgtgggtgct ggcgcggtcg ctctcggatc tgccgcgcga catgccggaa tcggtgcgca
     2641 gcatgatcgc gcggaagatc gaacagctcg aggagcggga tcgggcgttg ctggtggtcg
     2701 cgagcgtgca ggggcacgag ttcgattcgg cgatcgtcag cgaagcggcc gagatggatc
     2761 cgtcgcaggt cgaagagcgg ctggacgtgc tcgagcgcgt gcacgtgttc gtcaagcgcg
     2821 gtgcggagca tgagtttccc gacctgacgc tgacgctcgg ctacaccttc gtccacgtgc
     2881 tgtaccagaa catgctgtac gcgtcgctgc a
//
LOCUS       DASSYW010001050         2594 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1576834, whole genome shotgun sequence.
ACCESSION   DASSYW010001050 DASSYW010000000
VERSION     DASSYW010001050.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2594)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2594)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2594
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1576834"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..465)
                     /locus_tag="VFN38_16595"
     CDS             complement(<1..465)
                     /locus_tag="VFN38_16595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0051219 - phosphoprotein binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HET9013445.1"
                     /translation="MPVLQLNDQQFPLQAGATRVGAGGEADVPLPADPGLGVQAVIDR
                     AGSGPMTIRRATPAATVRVNGVLLGAEPTPLMHGDKVEIAGLELRFADDAKGGATQFV
                     SASDIAAMQGAKRSGAARPTSASGGRLVSLVDGKEYTVPTSGLVFGRDASCDV"
     gene            complement(553..2412)
                     /locus_tag="VFN38_16600"
     CDS             complement(553..2412)
                     /locus_tag="VFN38_16600"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HET9013446.1"
                     /translation="MAATLSPHASDEDAVAKRYDRRLARRLVVYVRPYRRLVAGALVL
                     LMTEGLLQLVGPLLTQRVIDVALPARDGAMAVRAALLYAGSLVLAFGCSYGETMLTAL
                     LGQRVMRDLRQQLFEHVQRLSIAFYDRTPVGRLVTRVTSDVESLNELFTAGVVAGLGD
                     LFTLLAIAVMMIVTDWRLAVAAFAVIPLVYLTSHVFQSRVRIAYRDIRTRLARITAYL
                     QERITGIRVVQLFGREAGEAERFAALNKGHLDANLRSITIYALYFPAIEFLTSVALAV
                     LLVAGAHRVGVGTLSVGVVAAFLQLLRRFYQPLQDLADKFNTLQQAMAASERIFLLLD
                     TEPATDAGAEGTGIAAPPSRDGVTIAFEDVWFRYGETEQGASSWVLRGISFVARPGAT
                     VALVGHTGAGKTTIVNLLLRFYEPQRGRITANGVDIRDVPLDEWRRLIGYVQQDIFLF
                     AADVRANIRLDAPLDDAAVMAAAARVGADRVIGRLPDGLGQVLGERGSSVSVGERQLL
                     SFARALAADPAVLVLDEATSAVDSEAEAEIQAGVQALMQGRTTIAIAHRLSTIVSAEE
                     ILVLHHGEVRERGTHAQLRSRGGLYERLYRLQAGDASGRDARHAALASLPGGG"
BASE COUNT          400 a          964 c          884 g          346 t
ORIGIN      
        1 cacgtcgcac gaagcgtcgc gcccgaacac cagacccgac gtgggcaccg tgtattcctt
       61 gccatccacc agcgagacga gccgtccgcc ggacgccgag gtgggccgcg ccgcgccgga
      121 gcgcttggcg ccctgcatgg ccgcgatgtc gctggcgctg acgaactgcg tcgcgccgcc
      181 cttggcgtcg tcggcgaacc gcagctcgag cccggcgatc tccaccttgt ccccgtgcat
      241 gaggggcgtc ggctccgccc cgagcagcac gccgttcacc cgcaccgtcg ccgcgggggt
      301 cgcccgccgg atcgtcatcg gcccgcttcc ggcccggtcg atcaccgcct gcacgcccag
      361 ccccggatcg gctggcaggg ggacgtccgc ctcccccccc gcaccgactc gggtcgcgcc
      421 cgcctgaagc gggaactgct gatcattgag ctgcaggacg ggcatggcgg ggcgaagcgc
      481 ggtcggactg ctacggcagg tacggcacgg acggtcccgc gccggacgct ccagggaccc
      541 gaagggcgga aactacccgc cgcccggaag gctggcaagc gcggcgtgac gcgcatcacg
      601 ccccgacgcg tcgcccgcct gcaggcgata cagccgctcg tacaacccgc cgcgcgagcg
      661 cagctgcgcg tgcgttcccc gctcccggac ctcgccatgg tgcaggacga gaatctcctc
      721 cgccgacacg atggtgctca accggtgcgc gatggcgatc gtcgtccgcc cctgcatcag
      781 tgcctggacc cccgcctgga tctccgcttc cgcctcgctg tccaccgcgc tggtcgcctc
      841 gtccagcacg agcaccgcgg gatcggccgc cagcgcgcgg gcgaacgaca acagctgccg
      901 ctcccccacg ctcaccgacg agccccgctc gccgagcacc tgccccagac cgtcgggcag
      961 ccggccgatc acgcgatccg cccccacgcg ggccgccgcc gccatcaccg ccgcgtcgtc
     1021 cagaggggcg tcgaggcgga tgttcgcgcg aacgtcggcc gcgaacagga agatgtcctg
     1081 ctgcacgtac ccgatcagcc ggcgccactc gtcgagcggc acgtcgcgga tgtcgacgcc
     1141 gttggccgtg attcgcccgc gctgcggctc gtagaatcgg agaaggaggt tgacgatcgt
     1201 cgtcttgccc gccccggtgt gcccgacgag cgccacggtg gcccctggcc gcgccacgaa
     1261 gctgatgccg cggagcaccc acgacgacgc gccctgctcc gtctccccat accggaacca
     1321 gacgtcctcg aacgcgatcg ttaccccgtc gcgggacggg ggcgcggcga tccccgtccc
     1381 ctcggcgccg gcatcggtcg ccggctcggt gtcgagcagg aggaagatgc gctccgacgc
     1441 cgccatcgcc tgctgcagcg tgttgaactt gtcggccagg tcctgcagcg gctgatagaa
     1501 gcggcgcagg agctggagaa aggccgccac cacgcccacc gagagcgtgc cgacgcccac
     1561 gcggtgcgcg ccggccacga gcagcaccgc cagcgcgacg gacgtcagga actcgatggc
     1621 cgggaagtag agcgcgtaga tcgtgatcga gcgcaggttc gcgtcgaggt gccccttgtt
     1681 gagcgcggcg aaccgctcgg cctcgcccgc ctcgcggccg aagagctgca ccacccggat
     1741 cccggtgatc cgttcctgga gataggcggt gatgcgcgcg agccgcgtgc ggatgtcgcg
     1801 gtacgcgatg cgcacgcggg actggaacac gtgcgacgtc aggtagacca gcgggatgac
     1861 ggcgaacgcc gcgaccgcca ggcgccagtc ggtgacgatc atcatcaccg cgatcgcgag
     1921 cagcgtgaac aggtcgccca gccccgcgac cacgccggcg gtgaacagtt cgttcagcga
     1981 ctccacgtcg ctcgtcacgc gcgtcaccag ccggcccacc ggcgtccgat cgtagaaggc
     2041 gatgctgagg cgctgcacgt gctcgaacag ctgctggcgg agatcgcgca tgacgcgctg
     2101 ccccagcagc gcggtgagca tcgtctcgcc gtacgagcag ccgaaggcga gcacgagcga
     2161 gcccgcgtag agcagcgccg cgcgcacggc catcgcgccg tcccgcgcgg ggagcgcgac
     2221 gtcgatgacg cgttgcgtca gcagcggccc gacgagctgg agcagccctt cggtcatgag
     2281 gagcaccagc gcaccggcta ccaaccgccg gtacggacgc acgtacacga cgaggcgtcg
     2341 agcgagccgg cggtcgtacc gcttcgcgac ggcgtcctcg tccgaggcgt gcggagagag
     2401 cgtggcggcc atggagagga attctaacgg ccgttcacgc ttcagcctgc cagcatgccg
     2461 ccctcgtcca ttgctggtac gcccgttgcg atagggcggg cgtcgtccac ttccaccttt
     2521 ggaggcagtg ctatgggtat cattgcttgg atcgtgctcg gtctgatcgc tggtgcgatc
     2581 gccaaggcgc tcat
//
LOCUS       DASSYW010001051         2404 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1664955, whole genome shotgun sequence.
ACCESSION   DASSYW010001051 DASSYW010000000
VERSION     DASSYW010001051.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2404)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2404)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2404
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1664955"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..811
                     /gene="cobA"
                     /locus_tag="VFN38_16605"
     CDS             <1..811
                     /gene="cobA"
                     /locus_tag="VFN38_16605"
                     /EC_number="2.1.1.107"
                     /inference="COORDINATES: protein motif:HMM:NF004790.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004851 - uroporphyrin-III
                     C-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0019354 - siroheme biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HET9013447.1"
                     /translation="SMDDPAGGLVAVIGHVSLVGAGPGDPALLTRLAIARLRRADLVL
                     YDALVDDGVLRYARKAQRFYVGKRAGRHALAQPAIEALMIRAARRGRRVVRLKGGDPF
                     VFGRGGEEALALQRAGVPYDVVPGVSNAVAAPAAAGIPVTHRGLASGFVVVAGHDEGA
                     FASAIGSLTPNGLTLVILMGMGRSAALAGQLIDRGWPRGTPAAVVVDAWTADQHGWRG
                     TLDELAAGDPDVDRTGAGTIVIGEVVRLGRVGQVVRVGHVGQLGEVHVSRR"
     gene            795..>2404
                     /locus_tag="VFN38_16610"
     CDS             795..>2404
                     /locus_tag="VFN38_16610"
                     /EC_number="1.8.7.1"
                     /inference="COORDINATES: protein motif:HMM:NF013259.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0050311 - sulfite reductase (ferredoxin)
                     activity [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite/sulfite reductase"
                     /protein_id="HET9013448.1"
                     /translation="MSVVDDPKTFGRARLSFASEADIDEFVTTLDRYERGELTSDEWR
                     QFRLVRGTYGQRQADDAQMLRVKIPQGILSSDQLDALADVGERYSRGFGHITTRQNVQ
                     FHFVKLHDVEPAMRRLAEAGLTTREACGSSVRNITACPYAGVSADERFDVTTYAEALT
                     RYLLRHPLSSTLPRKFKIAFEGCGADHVMTAINDLGFRAVLGANGARGFRVVAGGGTA
                     IMVTSAGLLHEFLPASEILRVAEAVLRVFARLGDYQHKQRNRMKFLIKALGWTRWRDE
                     YDRELAACRLRGAAPTLDIDPPASEAKPDWAPDSSPSVGFIAGRVSGGRISGPGLTPT
                     VVPILQTGDETFSRWRVTNVRPQKQFGYVMAVATVPLGDLTSEQMRVLGELARAYGDG
                     AIRVTPDQDLLFRWVNASDVRQLYRRLAAAGLGLAEAGTIADVASCPGAETCRLAVTQ
                     SRGLGRLLEDHLRARPDLIAAADGARIKISGCPNGCGQHHVATIGFQGSVRRIGSRPV
                     PQYFVMVGGGTTEYGASFARTAAKIPARR"
BASE COUNT          333 a          801 c          898 g          372 t
ORIGIN      
        1 ttccatggat gaccccgccg gaggactcgt ggccgtgatc ggacacgtct cgctcgtcgg
       61 cgcaggaccc ggagatcccg ccctgttgac gcggctcgcc atcgcgcggc tgcgccgcgc
      121 cgatctcgtg ctctacgacg cgctcgtcga cgacggcgtg ctcaggtacg cgcgtaaggc
      181 gcagcggttc tacgtcggga agcgcgccgg tcgtcatgcg ctggcgcagc cggcgatcga
      241 ggcgctgatg atccgcgcgg ccagacgcgg gcgtcgcgtg gtgcggctga agggcggcga
      301 cccgttcgtg ttcggtcgcg gcggggaaga ggcgctcgcg ctgcagcgcg ccggcgtgcc
      361 ctacgacgtc gtgccgggtg tcagcaacgc cgtcgccgcg ccggcggcgg ccggcattcc
      421 tgtgacccac cgcggcctcg cgtccggctt cgtcgtcgtc gccggccacg acgagggcgc
      481 gttcgcgtcg gcgatcggat cgctcacacc gaatggcctg acgctcgtga ttctgatggg
      541 catggggcga tcggcggcgc tcgccgggca gctgatcgat cggggctggc cgcgcgggac
      601 gccggcggcc gtggttgtgg acgcgtggac ggcggatcag cacggatggc gcggcacgct
      661 cgacgagctc gcggcgggcg atcctgatgt cgaccgcaca ggggcaggga cgatcgtcat
      721 cggtgaggtc gtgcggctgg gtcgggtggg tcaggtagtt cgggtgggtc acgtgggtca
      781 gctgggagag gttcatgtca gtcgtagatg atcccaaaac gttcgggcgc gcgcggttgt
      841 cgttcgcgag cgaagccgac atcgacgagt tcgtcaccac gctcgatcgg tacgagcgcg
      901 gcgagctgac gtccgacgag tggcggcagt tccggctggt gcgcggcacc tacgggcagc
      961 gtcaggcgga cgacgcgcag atgctgcgcg tgaagattcc gcagggcatc ttgtcgagcg
     1021 atcagctcga cgcgttggca gacgtcggcg aacgctattc gcgcggattc ggccacatca
     1081 cgacgcgcca gaacgtccaa ttccatttcg tcaagctcca cgacgtcgag ccggcgatgc
     1141 ggcgcctcgc ggaggcgggc ctcaccacgc gtgaagcgtg cggcagctcg gtgcggaata
     1201 tcacggcctg tccctacgcc ggggtctccg ccgacgaacg cttcgacgtc accacgtacg
     1261 ccgaggcgct gacacggtat ctgctgcgcc atccgctcag ctcgacgctg ccgcggaagt
     1321 tcaagatcgc gttcgagggc tgcggcgccg atcacgtgat gaccgcgatc aacgatctgg
     1381 gtttccgggc ggtcctcggc gccaacggcg cgcgcgggtt ccgcgtcgtc gccggcggcg
     1441 ggacggcgat catggtgacg tccgcggggc tgctgcacga gtttctgccc gcgtccgaga
     1501 tcctgcgcgt cgccgaagcg gtgctgcgcg tgttcgcgcg gctcggcgac taccagcaca
     1561 agcagcgcaa ccggatgaag ttcctgatca aggcgctcgg ttggacgcgc tggcgcgacg
     1621 agtacgaccg cgagctggcc gcctgccgcc ttcgcggcgc ggcaccgacg ctcgacatcg
     1681 atccgccggc cagcgaggcc aagcccgatt gggcgcccga ctcgtcgccg tcggtcggct
     1741 tcatcgccgg gcgcgtgagc ggcggccgga tcagcggtcc ggggctgacg ccgacggtgg
     1801 tgccgattct ccagaccggc gacgagacgt tcagccggtg gcgcgtcacc aacgtgcgtc
     1861 cgcagaagca attcggctac gtgatggcgg tggcgaccgt gccgctcggc gatctgacga
     1921 gcgagcagat gcgcgtcctc ggcgagctcg cgcgcgcgta cggcgacggc gcgattcgcg
     1981 tgacgccgga ccaggatctc ctgttccgct gggtgaacgc cagcgacgta cggcaactgt
     2041 accgccggct cgccgcggcc ggtttgggcc tggccgaagc gggcacgatc gccgacgtgg
     2101 cgagctgccc cggcgccgag acgtgccgac tggcggtgac ccagtcgcgc ggcctgggcc
     2161 ggctgctcga agatcacctg cgcgctcgtc cggacctgat cgcagcggcc gacggcgcgc
     2221 gcatcaagat cagcggctgc ccgaacggct gcggccagca tcacgtggcc acgatcggct
     2281 ttcagggcag cgtccgccgc attggctcgc gtccggtgcc gcagtacttc gtgatggtgg
     2341 gcggcggcac gaccgagtat ggggcgagtt tcgcgcggac tgccgcgaag atcccggccc
     2401 gccg
//
LOCUS       DASSYW010001052         2393 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1650921, whole genome shotgun sequence.
ACCESSION   DASSYW010001052 DASSYW010000000
VERSION     DASSYW010001052.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2393)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2393)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2393
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1650921"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..267)
                     /locus_tag="VFN38_16615"
     CDS             complement(<1..267)
                     /locus_tag="VFN38_16615"
                     /inference="COORDINATES: protein motif:HMM:NF013483.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013449.1"
                     /translation="MDKRKRHAAILELVSQQSVGTQEELRVLLHRRGWDVTQSTLSRD
                     LRELRLARVPTPEGVRYTTADGALSSAARPALDALLPQLLTRVDG"
     gene            408..1367
                     /gene="argC"
                     /locus_tag="VFN38_16620"
     CDS             408..1367
                     /gene="argC"
                     /locus_tag="VFN38_16620"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: protein motif:HMM:TIGR01850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003942 -
                     N-acetyl-gamma-glutamyl-phosphate reductase activity
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HET9013450.1"
                     /translation="MHRIPVGVLGASGYAGRELCSLIARHPRLDLAFATANERRGERA
                     RLGGTEVRFIAHDDAPLADAALVFAALPHGASAAWVERVRGAGARAVDLSSDLRPGNG
                     ATTAPYGLTEFARRELRDATIVANPGCYPTAILMAVLPLAKRGLIAPGATINASAASG
                     VTGAGLTPRTDLLFGEVTEDFRAYGIANTHRHLAEMRTVLGASGADADLIFTPHLLPV
                     ARGILATITVPLTEMLADPLAPYREEFDGERFVEVDAEPPALRDVVRRNVVRISARHV
                     AGVRQPTLLVLSAIDNLVKGAAGQAVQNANVVLGLDEPMGLPA"
     gene            1364..2116
                     /gene="argB"
                     /locus_tag="VFN38_16625"
     CDS             1364..2116
                     /gene="argB"
                     /locus_tag="VFN38_16625"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: protein motif:HMM:TIGR00761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003991 - acetylglutamate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HET9013451.1"
                     /translation="MTRVLKIGGRAQSDERLAHAILAASQADRVIVVHGGGDEVSALQ
                     RRLGLTPQFNGGRRVTTREDLEVVQMVLSGTANKRLVAALVGKGIRAVGVSGEDDGLL
                     RAAAANRETLGEVGAPSRVDPRLIQVLLDGGYVPVISPLGRDDATGATLNVNGDDAAA
                     AIAVAVGAEELLLVADVPGVIVDGSVISELDLDQASALIARGTAREGMAAKLQAARRA
                     VERGVPRVRIGNIDAIQSVTVGTAITLSPTAV"
     gene            2119..>2393
                     /locus_tag="VFN38_16630"
     CDS             2119..>2393
                     /locus_tag="VFN38_16630"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HET9013452.1"
                     /translation="MATLTTAPAGAAALLGLYKRAPIEIVRGEGVELFDAEDRAYLDF
                     TSGIGVNALGYGDPGLREALHAAAEGLIHTSNLFRTAPGEQLAARLV"
BASE COUNT          369 a          791 c          840 g          393 t
ORIGIN      
        1 cccgtcgacg cgcgtgagca gctgaggaag cagcgcgtcc agggcgggtc gcgcggcgct
       61 gctgagagcg ccgtcggcgg tcgtataccg aacgccttcg ggggtgggga cgcgtgccag
      121 tcggagctcc cgcaggtcgc gcgagagagt ggactgtgtg acgtcccacc cacgccggtg
      181 caacaggact cgcagctctt cctgggtgcc gaccgactgc tggctcacca gctcgagtat
      241 cgcagcgtga cgctttcgct tgtccaagcg cgagttcctc cgtgagtgcg cggggagcat
      301 accacgacta atgacgttgc ggcaggagag ccgcgatcgg gacagatatg tgccacgggc
      361 atggcgaggc ggttgacttc tgtggtgtgc aataatatgc attccgtgtg catagaatcc
      421 ctgttggcgt cctcggcgcc agtggctacg caggtcgtga gctctgctcg ctcatcgccc
      481 ggcacccgcg actcgacctc gcgttcgcga cggcgaacga acgccgcggc gagcgggcgc
      541 gtctcggcgg taccgaggtg cggttcattg cccacgacga cgcgccgctc gccgacgcgg
      601 cgctcgtgtt tgcagcactg cctcacggcg catccgcggc gtgggtcgaa cgagtgcgag
      661 gcgccggcgc gcgggccgtc gatctatcgt ctgacctgcg tccgggaaac ggtgcgacga
      721 cggcgccata cggcctcacc gagttcgcca ggcgcgaact acgcgacgcc accatcgtgg
      781 ccaatcccgg ctgctatccc acggccatcc tcatggcggt gctgccgctc gccaagcgcg
      841 gcctcatcgc gcccggcgcg acgatcaatg cgtcggcagc gagcggcgtg acgggggcgg
      901 gcctgacgcc gaggaccgat cttctgttcg gtgaagtcac cgaagacttt cgtgcgtacg
      961 ggattgccaa tacgcaccgg catctcgccg agatgcgcac cgtgctcggc gcgagcggcg
     1021 cggatgcgga cctgatattc actccacacc tgttgcccgt cgctcgcgga atcctggcca
     1081 cgatcaccgt gccgctcacg gagatgctcg ccgacccgct cgcgccgtac cgcgaggagt
     1141 tcgatggtga gcgttttgtc gaggtcgacg ccgaaccacc ggcgctgcgc gatgtggttc
     1201 gacgcaatgt cgtccgaatc tcggcgcgac atgtcgccgg cgttcgccaa ccgacgctcc
     1261 tcgtgctctc ggcgatcgac aacctggtga aaggcgctgc gggccaggcg gtgcagaacg
     1321 ccaacgtcgt gctcgggctc gacgagccga tggggttgcc ggcatgacgc gggtgctcaa
     1381 gatcggcggc cgcgcgcagt ccgacgaacg gcttgctcac gccatcctgg cggcctctca
     1441 ggcggaccga gtcatcgtcg tgcacggggg cggagacgaa gtgtccgctc tgcagcgacg
     1501 cctcggccta acgccgcagt tcaacggcgg ccgccgcgtc acgacgcgcg aggacctcga
     1561 ggtcgtgcag atggtactgt ccggaaccgc caacaagcga ctggtcgcgg cgttggtggg
     1621 gaaggggatt cgcgccgtcg gtgtttccgg cgaggacgac ggtctcctcc gcgctgctgc
     1681 ggcgaatcgc gagacgttag gcgaggtggg tgctccgtca cgcgtcgatc cgcgcctcat
     1741 ccaggtgctg ctcgatggcg gctacgtgcc cgtcatctcg ccactcgggc gcgatgacgc
     1801 aaccggcgcg acgctgaacg tcaacggtga cgacgcggcc gcagcgatcg cggtcgccgt
     1861 gggcgccgaa gagctcctgc tcgtcgcgga tgttcccggc gtcatcgtcg acggctcggt
     1921 catctccgag ctcgacctcg accaggcgtc ggcactcatt gcacgtggaa cggcgcgaga
     1981 aggaatggcg gcgaagctcc aggcggcacg ccgcgccgtc gagcgcggcg tgccgcgcgt
     2041 tcgaatcggc aacatcgatg cgatccagtc cgtgacagtt ggcacggcca tcactctttc
     2101 tccaacagcg gtttgacgat ggcgactctt acgacggcac cggcaggcgc agcggcgctc
     2161 cttgggctct acaagcgggc gccgatcgag atcgtacggg gcgagggcgt cgagctgttc
     2221 gacgccgagg accgcgcgta cctcgatttc accagtggca tcggggtcaa cgcgttaggc
     2281 tacggggatc ctggtctgcg cgaggcgctg cacgcggcgg ctgagggcct gatccacacg
     2341 tcgaacctgt tccggaccgc gccgggtgag cagttggcgg cgcggctcgt cga
//
LOCUS       DASSYW010001053         2195 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1429750, whole genome shotgun sequence.
ACCESSION   DASSYW010001053 DASSYW010000000
VERSION     DASSYW010001053.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2195)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2195)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2195
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1429750"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..246)
                     /locus_tag="VFN38_16635"
     CDS             complement(<1..246)
                     /locus_tag="VFN38_16635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013453.1"
                     /translation="MSDRIQTVRECYGAFESGDRGAIERHLADDYVFSAPPDVGIDRA
                     TYFERCWPNAANVAGFEFERLFEHDGEVFVTYVAARSD"
     gene            307..792
                     /locus_tag="VFN38_16640"
     CDS             307..792
                     /locus_tag="VFN38_16640"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HET9013454.1"
                     /translation="MASDAAPVLIAYDGSEVSRAAVRHAAELFAGRPAVVATVWEPGL
                     AAVSVGMPDTMGVGTLPPDPVTIEAVDRLQHEHASTVAGDGAELARSLGLAAEPQAVP
                     DDVDVADTLIGIARERGAAVGVVGSHGISGLRSRLLGSVSRKLLQHCDRPVLVIRDDS
                     G"
     gene            complement(798..1175)
                     /locus_tag="VFN38_16645"
     CDS             complement(798..1175)
                     /locus_tag="VFN38_16645"
                     /inference="COORDINATES: protein motif:HMM:NF014687.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF202 domain-containing protein"
                     /protein_id="HET9013455.1"
                     /translation="MTGPDRLDEPSPPTSDVVQRTSMAAERTWLAWWRTALAASVGAL
                     GVGRIAPEALDVPAWPYVVLGVGYAGIAVGLLLIGARRQHDLQRALDSDSPAPLSMWL
                     VKLFTVGGVALALVTVVLIVAQT"
     gene            complement(1216..1428)
                     /locus_tag="VFN38_16650"
     CDS             complement(1216..1428)
                     /locus_tag="VFN38_16650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013456.1"
                     /translation="MSLLRAMRKLVLGETWLLPLGVLLTLGVAALLREVAPEVWHDAG
                     PVLLPLAILIVLALGVQRSLPPPRSR"
     gene            complement(1425..>2195)
                     /locus_tag="VFN38_16655"
     CDS             complement(1425..>2195)
                     /locus_tag="VFN38_16655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013457.1"
                     /translation="ATLGERRAAKPSAVTPEKVLTAVSSGLAVSVELLEAMAIVLAVG
                     VSRRWRDAMIGASAATGACAVTAVVMGPVLLENVPLHTLRFTIGALLLLFGLEWLRKA
                     VLRLAGARSRSSALAEFVETKEELEGAPLPPEGEPDWAGRAVAFKGVLLEGVEVVLIV
                     TTLAARPSGAAPALVGAAAAVAVVAALGAWLRGPLMRLPETEMKWGVGVLLSAFGVFF
                     CGEGLHLDWPAGDGAVVLLAAVFALASAGLAHVVAVRR"
BASE COUNT          346 a          815 c          767 g          267 t
ORIGIN      
        1 gtcggaacgc gcggccacgt aggtgacgaa cacctcgccg tcgtgctcga acagccgctc
       61 gaactcgaac cctgcgacgt tcgccgcgtt cggccagcaa cgctcgaagt aggtcgcgcg
      121 gtcgatgccg acgtcgggtg gtgcggagaa gacatagtcg tcggccagat ggcgctcgat
      181 cgcgccgcgg tcgccagact cgaatgcgcc gtagcattcg cggacagtct ggatgcggtc
      241 gctcatggtc accgtgcccg ggaggatgtc acgccgcggg ctgggatcgc tgtaggctcg
      301 ccgggcatgg cgagcgatgc ggccccggtc ctgatcgcat acgacggctc ggaggtctcc
      361 cgggccgccg tccggcacgc cgccgagctc ttcgccgggc gcccggccgt ggtggcgacg
      421 gtctgggagc cagggctggc ggcggtatcg gtcggtatgc ccgacaccat gggcgtgggc
      481 acgctgcccc cggatccggt gacgatcgaa gccgtcgatc gcctccagca tgagcacgcc
      541 tcgaccgttg ccggcgacgg agccgaactc gctcgctcgc tcgggctggc cgccgagccg
      601 caggccgtgc cggacgacgt cgacgtggcg gacaccctga tcggcatcgc gcgagagcgc
      661 ggcgcggccg tcggagtggt gggctcgcac gggatctctg ggctgcgctc gcgcctcctc
      721 gggagcgtct cgcggaagct gctccagcac tgtgaccggc cggtgctcgt catccgcgac
      781 gacagcgggt agccgggcta cgtctgggcg acgatcagca cgaccgtgac cagcgcgagc
      841 gctactccgc cgacggtgaa cagcttcacc agccacatgc tcagcggcgc cggcgagtcg
      901 ctgtcgagcg cccgctggag gtcatgctgg cggcgggcgc cgatcagtag cagcccgacg
      961 gcaataccgg cgtagcccac acccagcacg acgtagggcc atgcaggcac gtcgagtgcc
     1021 tcgggcgcga tgcgtcccac gccaagcgcg ccgacgctcg cggccagcgc ggtgcgccac
     1081 caggcaagcc aggtccgctc ggccgccatc gaagtgcgct gcacgacgtc gctggtcggc
     1141 ggcgacggct cgtccaggcg gtccggtccc gtcatgcgct gatctaacca ccccggacta
     1201 gcggcgggaa ggaggtcacc ggcttcgggg tggtggcagg gatcgctgaa cccccaacgc
     1261 gagcacgatg aggatggcga gcggcagaag caccggaccc gcgtcgtgcc agacctccgg
     1321 agcgacctcg cgcagtaacg cggcaacgcc gagggtcagc agcacgccga gcggcagcag
     1381 ccaggtctcg cccaggacga gcttgcgcat ggcgcgcagg aggctcatcg ccgcaccgcc
     1441 accacgtgcg caagccccgc gctggccagc gcgaagaccg cggcgaggag cacaacggcg
     1501 ccgtctcccg cgggccagtc caggtgcagg ccctcgccgc agaagaagac gccgaacgcg
     1561 ctcagaagca cacccacgcc ccacttcatc tcggtctcgg gcagccgcat cagcgggccg
     1621 cgcagccacg cccccagcgc cgcgaccacg gccaccgcgg cggcggcgcc gaccagggcg
     1681 ggtgccgcac cggacggccg cgccgcgagc gtggtcacga tcagcacgac ctcgacgcct
     1741 tcgagcagga cccccttgaa ggccacggct cgcccggccc agtcgggttc gccctcgggc
     1801 gggaggggcg caccctcgag ctcctccttg gtctccacga actccgccag cgcggaggac
     1861 cgcgacctcg cgccggcaag gcgcagcacg gctttgcgca gccattccaa tccgaacagc
     1921 aacagcagtg cgccgatcgt gaagcgcagc gtgtggagcg gcacgttctc cagcagcacc
     1981 ggccccatca ccaccgccgt caccgcgcac gcgcccgtgg ccgcgctcgc accgatcatg
     2041 gcgtcacgcc agcgacggga gaccccgact gcgaggacga tcgccatcgc ctcgagcaac
     2101 tccaccgaca ccgcgagccc cgaactcact gccgtcagga ccttctcggg cgtcacggcg
     2161 ctgggtttgg cggcgcgccg ctcgccgagc gtcgc
//
LOCUS       DASSYW010001054         2584 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_344805, whole genome shotgun sequence.
ACCESSION   DASSYW010001054 DASSYW010000000
VERSION     DASSYW010001054.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2584)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2584)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2584
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_344805"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..826
                     /locus_tag="VFN38_16660"
     CDS             <1..826
                     /locus_tag="VFN38_16660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HET9013458.1"
                     /translation="VNSLFSGEYRSVFKGQGMEFSEVREYQPGDEVRSIDWNVTARMR
                     KPYVKRYIEERELTVMLVVDLSGSERFGTRSRFKSELASELAAVLAMSAIRNNDRVGA
                     VLFTDRIEHVVPPRKGRRHALRLMRDLLAFEPAGTGTDIAAAVDYAGKMLVHKSIIFV
                     VSDFQEEELEQPLKLLAQRHDVVAVTVDDPSEHELPDLGLARFVDPESGDTLDVDTSD
                     PAVRARFAEAVAAEVVARKRLLRRLAIDEIPLHTDGGVVDPLIRFFRTRETRSRHR"
     gene            829..1800
                     /locus_tag="VFN38_16665"
     CDS             829..1800
                     /locus_tag="VFN38_16665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013459.1"
                     /translation="MRPSTRALLAVVSALALAAPARASAQAATRIPVQAGATLDRDSV
                     TVGDVVRLTVRVRGPRNATINFPAAVDSLGPVQSLEPPIVRDGADTLDASDRIAVYRL
                     AAWDVGRLQIRLGEVLVQTDDDERRVALPLPALFVRSVLPADTSLRVPKPARPLIEPR
                     APVAWWWWLAAALAALALGLGLWWWRRRRRGVHGPTGDPFADAEAAFARVERLRLVDA
                     GEPGRHAALMADVARRYLAGRFAHASLAHTSGELLAALRGEPTVPHERLRRLLDEVDR
                     IKFAAAPVAPHGASALGAEARALVVAEHEQARKLAAAADATAGRAAA"
     gene            1797..>2584
                     /locus_tag="VFN38_16670"
     CDS             1797..>2584
                     /locus_tag="VFN38_16670"
                     /inference="COORDINATES: protein motif:HMM:NF012321.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HET9013460.1"
                     /translation="MIQLGPLQFAKPWWLLLLLLLPAWWLLARRRRPAAIVFSRVPVL
                     ARGPRAGRGISKLLAALRNLALLLGIVALARPRSGARAETSTTEGINMVIAFDISSSM
                     LAMDFQPDNRLEVARAKIKQFVQTRSSDRIGIVAFSGEALTQVPLTTDYPVVQSALDN
                     LQPGQLEDGTAIGTAIATAANRLKDAPGKSRVLIVLTDGVNNRGAIDPRTAARAAAQF
                     GIKIYGIGVGTEGMAPVPVGRGLFGLRYEMQKVEIDDALLTDIST"
BASE COUNT          326 a         1001 c          911 g          346 t
ORIGIN      
        1 ggtgaactcg ctcttctccg gggagtaccg ttcggtattc aaggggcagg gcatggagtt
       61 ctcggaggtg cgcgagtacc agcccggcga cgaggtgcgc tccatcgact ggaacgtcac
      121 ggcgcgcatg cgcaagccgt acgtcaagcg gtacatcgag gagcgcgagc tcaccgtcat
      181 gctcgtcgtg gacctctccg gctccgagcg gttcggcacg cgcagccgct tcaagagcga
      241 gctggcgagc gagctcgccg ccgtgctggc gatgtccgcc atccgcaaca acgaccgcgt
      301 cggcgccgtg ctgttcaccg accggatcga gcacgtcgtc ccgccgcgca agggacggcg
      361 ccacgcgctc cgcctgatgc gcgacctgct cgccttcgag ccggcgggca ccggcaccga
      421 catcgccgcc gcggtggact acgccggcaa gatgctcgtc cacaagtcga tcatcttcgt
      481 cgtctccgac ttccaggagg aggagctgga gcagccgctc aagctcctcg cgcagcgcca
      541 cgacgtcgtc gccgtcacgg tggacgatcc cagcgagcac gagctgcccg acctcgggct
      601 cgcgcggttc gtcgaccccg agtcgggcga cacgctcgac gtggacacga gcgacccggc
      661 cgtgcgcgcg cggttcgccg aggcggtggc ggcggaggtc gtggcgcgca agcggctgct
      721 gcgccgcctc gccatcgacg agatcccgct gcacacggac ggcggcgtcg tcgacccgct
      781 catccgcttc ttccgcacgc gcgagacgcg ctcgcggcac cggtgaccat gcgcccgtcc
      841 acgcgcgccc tcctcgccgt cgtgtccgcg ctcgcgctcg cggcgccggc gcgcgcgtcc
      901 gcccaggcgg ccacgcgcat cccggtgcag gccggcgcca cgctcgaccg cgactcggtc
      961 acggtgggcg acgtggtgcg gctcacggtg cgggtgcgcg gcccgcgcaa cgcgaccatc
     1021 aacttccccg ccgcggtgga ctcgctcgga ccggtgcagt cgctcgagcc cccgatcgtc
     1081 cgcgacggcg ccgacacgct ggacgcctct gaccgcatcg ccgtctaccg gctggcggcg
     1141 tgggacgtgg gccggctgca gatccggctc ggcgaggtgc tcgtccagac cgacgacgac
     1201 gaacgccgcg tggcgctccc gctgcccgcg ctgttcgtcc gcagcgtgct gcccgccgac
     1261 acgtcgctgc gcgtgccgaa gccggcgcgg cccctgatcg agccgcgggc gcccgtcgcg
     1321 tggtggtggt ggctcgccgc cgccctcgcc gcgctggcgc tggggctcgg cctgtggtgg
     1381 tggcggcgcc gccggcgcgg tgtgcacggc cccaccggcg accccttcgc cgacgcggag
     1441 gccgcgttcg cccgcgtcga acggctccgg ctggtggacg ccggcgagcc gggccggcac
     1501 gcggcgctca tggccgacgt cgcgcgccgc taccttgcgg gccgcttcgc ccatgcgtcg
     1561 ctcgcgcaca ccagcggaga gctgctggcg gcgctgcgcg gcgagcccac cgtgccgcac
     1621 gagcggctcc gtcgcctcct cgacgaggtg gaccggatca agttcgccgc ggcgcccgtc
     1681 gcgccgcacg gcgcgagcgc cctcggtgcc gaggcgcgcg ccctcgtggt cgccgagcac
     1741 gaacaggcgc ggaagctggc cgcggcggcc gacgccaccg cggggagggc cgcggcatga
     1801 tccagctcgg acccctccag ttcgcgaagc cctggtggct cctcctgctg ctcctcctcc
     1861 cggcgtggtg gctgctcgcc cggcgacggc gccccgcggc catcgtcttc tcccgcgtgc
     1921 ccgtcctggc gcgcgggccg cgcgccggcc gcggcatctc caagctgctc gccgccctcc
     1981 gcaacctcgc gctcctcctc ggcatcgtcg ccctcgcgcg gccgcgctcc ggcgcccgcg
     2041 cggagacgtc caccaccgaa ggcatcaaca tggtgatcgc cttcgacatc tcgagctcga
     2101 tgctcgcgat ggacttccag cccgacaacc ggctcgaggt ggcgcgggcc aagatcaagc
     2161 agttcgtgca gacgcgcagc tccgaccgca tcgggatcgt cgccttctcc ggcgaggcgc
     2221 tcacccaggt gcccctcacc accgactacc cggtggtgca gtccgcgctc gacaacctgc
     2281 agcccgggca gctggaggac ggcaccgcca tcggcacggc aatcgccacg gcggcgaacc
     2341 ggctcaagga cgcgccgggg aagtcgcgcg tgctcatcgt cctcaccgac ggcgtgaaca
     2401 accggggcgc gatcgacccg cgcaccgcgg cgagggcggc ggcccagttc gggatcaaga
     2461 tctacggcat cggcgttggc accgagggga tggcgccggt gccggtcggg cgcggcctgt
     2521 tcgggctgcg ctacgagatg cagaaggtgg agatcgacga cgccctcctc accgacatct
     2581 cgac
//
LOCUS       DASSYW010001055         3541 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1393007, whole genome shotgun sequence.
ACCESSION   DASSYW010001055 DASSYW010000000
VERSION     DASSYW010001055.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3541)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3541)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3541
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1393007"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..435)
                     /locus_tag="VFN38_16675"
     CDS             complement(<1..435)
                     /locus_tag="VFN38_16675"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HET9013461.1"
                     /translation="MRRFIALLLPLVAAACGGSGNNTDRRTLVDSRDNYDPRSLDPAL
                     STDVPTGRAVGYLFDGLTRFTPDARVVPALATSWDVSPDGSVYTFHLRRGVTFTDGTP
                     FVARQVAKSWQRVLDPKVRGGRGWPLYPILGAKEFADGKGTSI"
     gene            599..832
                     /locus_tag="VFN38_16680"
     CDS             599..832
                     /locus_tag="VFN38_16680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013462.1"
                     /translation="MTKRSDRPSREVARLEGYVYRRALAGRELIPAVGAGIVMGLAGY
                     YVARLFLERTPLLPEDRRLGKHHATGPGRRPRG"
     gene            829..3153
                     /locus_tag="VFN38_16685"
     CDS             829..3153
                     /locus_tag="VFN38_16685"
                     /inference="COORDINATES: protein motif:HMM:NF013283.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BamA/TamA family outer membrane protein"
                     /protein_id="HET9013463.1"
                     /translation="MILRLSALAGWGRRAALATALAAALPLGVRAQGVECDGTPGERE
                     VRALQFRGNRAFSSRDLELRVSTTSSDFLQRRLHAFGTRRCLDSDALRLDVGRLRVFY
                     QRHGYYAATVDTAVTSANDGDAVVVTFLIAEGLPVIIDSLRIAGLDSAVRTIVDTSEL
                     ELNKGIPFDRTKLQSSIDSIKTRLRNNGYPRADVAAAYTVDTIVRRATVGLTVLPGNR
                     ARIGQLRVFSEPLPGEDEARLGAPTVLRLSTVRTGDVYSEREIADAQRTLYQTDLFRN
                     VEVRLAPDSVQPKGDSLVTLDILVRENYLRQVDTEIGWSVLDCFKDRTRYIDKSFLGE
                     ARRLELTAQVSKVGYGQHTRFADGSLCAYAIRADTFSTKLNYFTSASLRLPTLFGFRA
                     SPTFSIYSERRGEYQAFLRTTLVGGEASFTRDVARDLPLRLAYSLEFGRTEAPPALLC
                     ALFSFCDSRSRAFITDQNRRLAVASAHLERIRTDNPFVPRAGTVLRLDVRTSLRELYS
                     DPQLEFLKGLSDASYYKAISPSVTFAARLRLGTVLGRTLSFNDSTGFVPPEERLYAGG
                     AGSVRGFQQNALGDLIYIAESAPVTVPGNADTVYIRLAGTGDTQTVRRIVPVGGNSLI
                     VANLELRLRSRFFPELLQYTVFADAGDVWQRESAIGRRSHRLATLFLDGLKWTPGVGV
                     RVFTPVGPFQANVGYNPFAQPAGPIYYDAPPSTTSGFAALYCVTPGNTIPAVMSPNGV
                     YEQVANAECPRFQPERKNTFLSRLTFTFSIGPDF"
     gene            3176..>3541
                     /locus_tag="VFN38_16690"
     CDS             3176..>3541
                     /locus_tag="VFN38_16690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013464.1"
                     /translation="MTRRRFVVLVALCTLVVLGLIGVGVGTFLLHTDTGQAGLRRSIQ
                     QQVASSMKGKLFIGPMSGNFFTGVTIDSLELRDDEDSLFVATGRVKLEYDVRDIVDRR
                     LHFRRVDVEHPVVVLRQHEN"
BASE COUNT          497 a         1259 c         1250 g          535 t
ORIGIN      
        1 gatcgaggtg cccttgccgt cggcgaactc cttggcgccg aggatgggat agaggggcca
       61 gccgcggccg ccgcgcacct tggggtcgag cacgcgctgc cagctcttcg ccacctgccg
      121 ggcgacgaac ggcgtgccgt cggtgaaggt gacgccgcgg cggaggtgga aggtgtacac
      181 gctcccgtcc ggcgagacgt cccagctggt ggccagggcg gggacgaccc gtgcgtcggg
      241 ggtgaagcgg gtcagcccgt cgaacaggta gccgacggcg cggccggtgg ggacgtcggt
      301 ggacagcgcc gggtcgagcg agcgcggatc gtaattgtcc cgggagtcca ccagggtgcg
      361 ccggtccgtg ttgtttccgc ttcccccgca ggccgcggcg acgaggggca ggagcagggc
      421 gatgaagcga cgcatttcgt tctggcgtaa gcagttgaca gcatggcgaa ggcgcgagaa
      481 cttatccgtg ctgtagtgta ccgtcaatga agctcgcgcc cgccggagag ccccgccgcg
      541 cgggcgcgtc gtgcgtccgt tgcaagttgc gtcccctccc tcccgcccgt cccttcatat
      601 gaccaagaga tccgatcgcc cctcccgcga ggttgcgcgt ctggagggct acgtgtaccg
      661 gcgtgcgctc gcggggcggg agctcattcc ggccgtgggc gcggggatcg tgatgggact
      721 ggccggctac tacgtcgccc ggctcttcct ggagcgaacg ccgctgctgc cggaagaccg
      781 tcgcctcggc aagcaccacg cgaccgggcc gggacggcgc ccgaggggat gatcctgcga
      841 ctctccgccc tggcgggatg ggggcgccgc gccgcgctcg cgaccgccct ggccgcagcg
      901 ctgccgctcg gggtgcgggc gcagggagtg gagtgcgacg gcacgccggg cgagcgggag
      961 gtgcgcgcgc tccagttccg gggcaaccgc gccttctcca gccgcgacct ggagctccgc
     1021 gtctccacca cgtcgtccga tttcctgcag cgccggctcc acgccttcgg cacgcgccgc
     1081 tgcctggaca gcgacgcgct gcggctcgac gtgggacgcc tgcgggtgtt ctaccagcgg
     1141 cacggctact acgcggcgac ggtcgacacc gccgtcacca gcgccaacga cggcgacgcg
     1201 gtggtggtga ccttcctgat cgcggaaggg ctgccggtga tcatcgactc cctgcggatc
     1261 gcggggctcg acagcgcggt gcgcacgatc gtggacacga gcgagctgga gctgaacaag
     1321 gggatcccgt tcgaccgcac gaagctccag tcgtccatcg actcgatcaa gacccggctg
     1381 cggaacaacg gctatccgcg cgcggacgtg gcggcggcgt acacggtgga caccatcgtc
     1441 cgccgcgcga ccgttggcct caccgtgctg ccggggaacc gtgcgcggat cggccagctc
     1501 cgcgtgttca gcgagccgct gcccggcgag gacgaggcgc ggctcggcgc gccgacggtg
     1561 ctgcggctgt ccaccgtgcg aacgggcgac gtgtacagcg agcgcgagat cgcggacgcc
     1621 cagcgcacgc tgtaccagac ggacctgttc cggaacgtgg aggtccgcct cgcccccgac
     1681 agcgtgcagc cgaaggggga ctcgctcgtc acgctcgaca tcctcgtgcg cgagaactac
     1741 ctgcggcagg tggacaccga gatcggctgg tccgtgctcg actgcttcaa ggaccgcacg
     1801 cgctacatcg acaagagctt cctcggcgag gcgcgccggc tcgagctcac ggcccaggtc
     1861 tcgaaggtgg gctacgggca gcacacgcgc ttcgccgacg gcagcctgtg cgcgtatgcc
     1921 atccgcgccg acaccttcag tacgaagctg aactacttca cgtcggcgtc gctccggctg
     1981 ccgacgctgt tcggcttccg cgcctcgccc accttctcga tctacagcga gcggcgcggc
     2041 gagtaccagg cgttcctgcg cacgacgctg gtggggggcg aggcgtcgtt cacgcgcgac
     2101 gtggcgcgcg acctcccgct gcgcctggcg tactcgctgg agttcggccg caccgaggcg
     2161 ccgccggcgc tgctctgcgc cctgttcagc ttctgcgatt cccggtcgcg cgccttcatc
     2221 accgaccaga accgccggct cgccgtggcc agcgcgcacc tggagcggat caggacggac
     2281 aacccgttcg tgccccgcgc cggcacggtg ctgcggctgg acgtgcggac gtcgctgcgc
     2341 gagctctact cggacccgca gctcgagttc ctcaaggggt tgagcgacgc ctcgtactac
     2401 aaggcgatct cgccgtcggt gaccttcgcc gcgcgcctgc ggctcgggac ggtgctcggc
     2461 cgcaccctct ccttcaacga ctccaccggc ttcgtccccc cggaagagcg gctctacgcc
     2521 ggcggggcgg ggagcgtgcg gggcttccag cagaacgccc tgggcgacct gatctacatc
     2581 gccgagagcg cgccggtgac ggtgccgggc aacgcggaca cggtgtacat ccgcctcgcc
     2641 ggcaccggcg acacccagac ggtgcggcgc atcgtcccgg tgggcggcaa ctcgctgatc
     2701 gtggccaacc tcgagctgcg cctgcgcagc cgcttcttcc ccgagctgct ccagtacacc
     2761 gtcttcgccg acgcgggcga cgtctggcag cgcgagtcgg cgatcggccg ccgctcccac
     2821 cggctggcca cgctcttcct cgacggcctg aaatggacgc cgggcgtcgg cgtgcgggtg
     2881 ttcacccccg tggggccctt tcaggccaac gtggggtaca acccgttcgc ccagcccgcg
     2941 ggccccatct actacgacgc accgccgagc acgacgtcgg gcttcgcggc gctctactgc
     3001 gtgacgcccg gcaacacgat ccccgcggtg atgagcccga acggcgtcta cgagcaggtg
     3061 gcgaacgccg agtgcccccg cttccagccg gagcggaaga acaccttcct cagccggctg
     3121 accttcacct tctcgatcgg ccccgacttc tagctccgcc gcgcacgtgc ctcgcatgac
     3181 ccgccgccgc ttcgtcgtcc tcgtcgccct gtgcacgctc gtcgtgctcg ggctgatcgg
     3241 ggtgggcgtc ggtaccttcc tcctccatac ggacacgggg caggcggggc tgcggcggag
     3301 catccagcag caggtcgcgt cgtcgatgaa ggggaagctc ttcatcgggc cgatgagcgg
     3361 gaacttcttc accggggtga cgatcgactc gctggagctg cgcgacgacg aggactcgct
     3421 gttcgtggcc acggggcgcg tgaagctcga gtacgatgtg cgcgacatcg tggaccgccg
     3481 cctgcacttc cggcgcgtcg acgtggagca tccggtggtc gtgctgcggc agcacgagaa
     3541 c
//
LOCUS       DASSYW010001056         3304 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1614203, whole genome shotgun sequence.
ACCESSION   DASSYW010001056 DASSYW010000000
VERSION     DASSYW010001056.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3304)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3304)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3304
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1614203"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..399)
                     /locus_tag="VFN38_16695"
     CDS             complement(<1..399)
                     /locus_tag="VFN38_16695"
                     /inference="COORDINATES: protein motif:HMM:NF013736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HET9013465.1"
                     /translation="MTSNPACDPRDVGLQATRVDPARIAAVRATGLLDSDVEEVFDRL
                     TRLAVRLVGVPAAFISLVDADRDFYKSACGFGEPLASVRELTGPTFCHYTVQRTEPLV
                     IPDTAADPVYRDVPTVRTLGVAAYVGVPLIV"
     gene            complement(526..1587)
                     /locus_tag="VFN38_16700"
     CDS             complement(526..1587)
                     /locus_tag="VFN38_16700"
                     /inference="COORDINATES: protein motif:HMM:NF021495.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2214 family protein"
                     /protein_id="HET9013466.1"
                     /translation="MDSRLLLAWLHLLALAVGLAGVWARARALRDSLRDPEDRGALRR
                     AFAGDAWWGVAAGLWLVTGLWRLIAGTEKSASWYAVNHVFFLKMALYLAIVGLEVWPM
                     MTLMRWRTKRALPDPRDAGRIEVISYVQCALVVATVLAAAAMARGYGMTAAGGAVPVT
                     SGAPAVGAAAVPPAVTSADTAGVPPMTPSGTEIVTGEDLALLTRELAMPLDGIDPATL
                     RSNFDERRGGGTRQHQALDIMAPQRTPVRSAAKGRVLKLFTSAAGGLMIYAADSSERF
                     IMMYAHLDSYEPGLRDGAPLARGQPIGYVGFTGNAIASAPHLHFAVARSADVKRWSKG
                     KPIDPLPVLVAAAAAGAGR"
     gene            1749..2222
                     /locus_tag="VFN38_16705"
     CDS             1749..2222
                     /locus_tag="VFN38_16705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013467.1"
                     /translation="MRTRLSLLLLLLVMPGVAASQATPTSEADVSAVVLRMFEGMRNA
                     DSALVRSTLAPGARFASVNARTTPAAISYETPDRWLSGIAGSAKRWDERLYDTQVRVD
                     GDIAQVWTGYTFYLDGKIRHCGVDAMELLRDATGWKITQLSDTQRREGCRDVPPR"
     gene            2261..>3304
                     /locus_tag="VFN38_16710"
     CDS             2261..>3304
                     /locus_tag="VFN38_16710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013468.1"
                     /translation="MSAHPYDRIPALAGLATMEEAARVGFPVDENVARLVRFHWVERR
                     LMAALIAHLTAEPVWEVKCALALHQWQSAEHVDALRGRIAEMRQPAPAMDVAPDAALD
                     RFLDELLRSRGTAELLAGVYQVAYPALADAYREHVARTNPLVDHPTRRLLRSALAETE
                     DAVAWGARALDAVCRADARSESQARAWAAQLRALLAAAGGVAGDRERAGDPQPRELRS
                     AQPFVPDFHPRRDERFGGTYNFEFPPHVVYNAPGVPADERNLALLCKRALEMDVPEMM
                     ASFISERAGQPWEFHRDYSRQLWDEARHAMMGTVALQARGIDWKAELPLNVSFALRLN
                     LHATPLERQIMLYA"
BASE COUNT          475 a         1178 c         1221 g          430 t
ORIGIN      
        1 gacgatgagg ggtacgccga cataggcggc aaccccgagg gtgcggaccg tgggcacgtc
       61 ccggtagacg gggtcggcgg cggtgtccgg aatgacgagc ggctccgtgc gctgaaccgt
      121 gtaatggcag aaggtgggac cggtgagctc ccgcaccgac gccagcggct ccccgaagcc
      181 gcacgccgac ttgtagaagt cccggtccgc gtccaccagc gagatgaacg ccgccggcac
      241 gccgacgaga cgcaccgcca gccgggtcag ccggtcgaag acctcctcga cgtcgctgtc
      301 cagcaggccg gtcgcgcgca ccgccgcgat gcgggccgga tcgacgcgag tcgcctggag
      361 cccgacgtca cgagggtcgc aggcggggtt cgacgtcatg agctcgtgac cgatggtcgc
      421 caggacgcgc gcgaagggac tccgggtgtc tgcatgcagc tcaagctagc gccggcggcc
      481 gactctggtg gttgggttcg ccagtggtcg cgacgtagtc ggagatcagc gccccgcccc
      541 ggccgccgcc gcggccacca gcaccggcag cggatcgatc ggcttcccct tggaccagcg
      601 cttcacgtcg gcgcttcggg ccacggcgaa gtgcaggtgc ggcgcgctcg cgatggcgtt
      661 gccggtgaag cccacgtaac cgatgggctg cccgcgcgcg agtggcgcgc cgtcgcgcag
      721 gccgggctcg taggagtcga ggtgcgcgta catcattatg aagcgctccg aggaatcggc
      781 ggcgtagatc atcagtccgc cggcagcgct cgtgaacagc ttcagcacgc gtcccttcgc
      841 cgccgacctc accggggtgc gctgcggcgc catgatgtcc agcgcctggt gctgccgggt
      901 cccgccacca cggcgctcgt cgaagttgct gcgcagggtg gcgggatcga tcccgtcgag
      961 cggcatcgcg agctcgcgcg tcagcagcgc caggtcctcg ccggtcacga tctcggtgcc
     1021 gctgggcgtc atcggcggga cgccagcggt gtcggcggag gtgacggccg gcggcaccgc
     1081 agcggcgccg accgccggcg cccccgacgt cacgggcacc gcgccgccgg cggccgtcat
     1141 cccgtacccg cgcgccatcg ccgcggcggc gaggacggtg gcgacgacga gcgcgcactg
     1201 cacgtagctg atcacctcga tccgcccggc gtcgcgcgga tcggggaggg ctctcttcgt
     1261 gcgccagcgc atcagcgtca tcatcggcca gacctcgagg ccgacgatgg cgaggtacag
     1321 cgccatcttc aggaagaaga cgtggttgac ggcgtaccag gaggcgctct tctccgtgcc
     1381 ggcgatcagc cgccagaggc cggtgacgag ccagagtccg gccgccaccc cccaccaggc
     1441 gtcgccggcg aatgcgcgcc gtagcgcgcc acggtcctcg gggtcgcgga gggaatcgcg
     1501 cagggcgcgg gcgcgggccc acacgccggc gaggccgacg gcgagcgcga ggaggtgcag
     1561 ccaggccagc aggaggcgag agtccacggc tcaagatgat accgtgacgg cgtgcgcgtc
     1621 agaagggcgg cggaagggcg cctctcgcgg gccgcgtcgc tcgcgttcag attgcgaccg
     1681 tcgcccggat cccgccggcc tcccgcccgg gtatccgcac caggcccttc ctactcatcc
     1741 accaacgcat gcgcactcgc ctgtcgctgc tcctgctgct tctcgtgatg ccgggcgtcg
     1801 ccgcgtcgca ggcgacgccg acgtccgaag ccgacgtgtc cgccgtcgtc ctccgcatgt
     1861 tcgagggcat gcgcaacgcc gacagcgcgc tggtgcgctc gacgctcgcg ccgggtgcgc
     1921 ggttcgcgag cgtgaatgcc cgcacgacgc ccgcagcgat cagctacgag acacccgacc
     1981 gctggctctc gggcatcgcc ggctccgcga agcggtggga cgagcggctg tacgacaccc
     2041 aggtgagggt ggacggggac atcgcgcagg tgtggacggg gtacaccttc tacctggacg
     2101 gaaagatccg ccactgcggc gtggacgcga tggagctgct gcgcgacgcc accggctgga
     2161 agatcaccca gctctccgac acgcagcggc gcgaggggtg ccgcgacgtg ccgccgcgct
     2221 gaacggcacg gcatccggga tgtgagacga ccgtagcgcc atgtccgccc acccctacga
     2281 ccggatcccc gcgctcgccg gcctcgcgac catggaggag gcggcgcggg tgggcttccc
     2341 ggtggacgag aacgtcgcgc ggctggtgcg cttccactgg gtggagcggc ggctcatggc
     2401 ggcgctcatc gcgcacctca cggccgagcc ggtgtgggag gtgaagtgcg cgctcgcgct
     2461 gcatcagtgg cagagcgcgg agcacgtgga cgccctgcgg gggcgcatcg ccgagatgcg
     2521 gcagccggcg ccggcgatgg acgtggcgcc cgacgcggcg ctcgaccgct tcctcgacga
     2581 gctcctgcgc tcgcgcggca ccgccgagct gctcgcggga gtgtaccagg tggcctaccc
     2641 tgcgctggcc gacgcgtacc gcgagcacgt cgcgcgcacg aatcccctcg tcgaccatcc
     2701 gacgcgccgg ctgctccgga gcgcgctcgc cgaaacggaa gatgccgtgg cgtggggggc
     2761 gcgggcgctc gacgccgtct gccgcgccga tgcgcggagc gagtcgcagg cccgggcgtg
     2821 ggcggcgcag cttcgcgcgc tgctcgcggc ggccggcggc gtcgcgggcg atcgcgagag
     2881 ggcgggggat ccccagccgc gggagctccg ctcggcgcag ccgttcgtgc ccgacttcca
     2941 cccccgccgc gacgagcgct tcggcgggac gtacaacttc gagttcccgc cgcacgtcgt
     3001 gtacaacgcg cccggcgttc ccgccgacga gcgcaacctg gcgctcctct gcaagcgcgc
     3061 gctcgagatg gacgtgcccg agatgatggc gtcgttcatc agcgagcggg cgggccagcc
     3121 gtgggagttc catcgcgact attcgcggca gctctgggac gaagcgcggc acgcgatgat
     3181 gggaaccgtc gcgctccagg cgcgcggcat cgactggaaa gccgagctgc cgctcaacgt
     3241 cagcttcgcg ctgcggctca acctccacgc gacgccgctc gagcggcaga tcatgctcta
     3301 cgcg
//
LOCUS       DASSYW010001057         2056 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1108721, whole genome shotgun sequence.
ACCESSION   DASSYW010001057 DASSYW010000000
VERSION     DASSYW010001057.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2056)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2056)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2056
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1108721"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..865)
                     /locus_tag="VFN38_16715"
     CDS             complement(<1..865)
                     /locus_tag="VFN38_16715"
                     /inference="COORDINATES: protein motif:HMM:NF028500.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OB-fold nucleic acid binding domain-containing
                     protein"
                     /protein_id="HET9013469.1"
                     /translation="MKRDAPRQQRLRLDTPVTYLKGVGPARAEALRRLGVVTAGDLLY
                     HIPHRYEDASTVATIASLEPGMQGTVIGRVVSKGVLPTRKGLRIFQAVLRDETGMIEV
                     SWPGQPYLDRTIAKDDVLLVSGSVRFFHGRQLQPREYVNLGDEDEGTAQGRVLSVYPA
                     TEGLSFKVIRGIIESHLDELLPLVTEYLPREVLSFAAVPSIGDALRMVHRPASLGDAM
                     EGRARLAFEELLFVQLLQQRAKALARETRRGIHFENKRALTTKLREALPFQLTGAQAR
                     VLREIFADMCSE"
     gene            complement(862..1794)
                     /gene="ftsY"
                     /locus_tag="VFN38_16720"
     CDS             complement(862..1794)
                     /gene="ftsY"
                     /locus_tag="VFN38_16720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005047 - signal recognition particle
                     binding [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HET9013470.1"
                     /translation="MRILRKNDDLPKRSLWAKIKDVALMDVAVIARGGVDGGSLERLE
                     ELLLESDIGVPTTLRLVADVERLATLGKVKSQDQFLDALRDGITSALRSGRSDPALTL
                     SGTRPSVILVVGVNGAGKTTFIGKLAARLRGEGKKVMVAAGDTFRAGAVDQLRVWAER
                     TGSEFVGASAGTDPASVAFDAIDAAVARGVDVLIVDTAGRLHTSDGLMTELKKVARVI
                     AKRLPDAPHETLLVLDGTIGQNAVQQAKMFAAAVPLSGLVVTKLDGTAKGGVVVAVHE
                     AVDLPVKFVGVGEQSGDLLPFDAREFAGELLGGE"
     gene            complement(1837..>2056)
                     /locus_tag="VFN38_16725"
     CDS             complement(1837..>2056)
                     /locus_tag="VFN38_16725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013471.1"
                     /translation="IYDARMPGGSAVLAVNASRELVPRRSTLTTRRVGDAPAVGDAPG
                     LRSLGWAYALAVLLLCAEWGLRRRAGVR"
BASE COUNT          304 a          787 c          665 g          300 t
ORIGIN      
        1 gctcgctgca catgtcggcg aagatctcgc gcagcacgcg cgcctgcgcg cccgtgagct
       61 gaaagggaag cgcttcgcgc agcttcgtgg tgagcgcgcg cttgttctcg aaatgaatgc
      121 cgcgccgcgt ctcgcgggcc agcgccttcg cgcgctgttg gaggagctgc acgaacagca
      181 gctcctcgaa cgccaggcgc gcgcgcccct ccatcgcgtc gccgagcgac gccggccggt
      241 gcaccatgcg cagcgcgtcg ccgatggacg gcacggccgc gaacgacagc acctcgcgcg
      301 gcagatactc cgtgacgagc gggagcagct catcgagatg cgactcgatg atgccgcgga
      361 tcaccttgaa cgacagccct tcggtcgcgg gatacaccga gagcacgcgg ccctgcgccg
      421 tcccttcgtc ctcgtcgccg aggttgacgt actcccgcgg ctgcagctgc cgtccgtgga
      481 agaatcgcac gctcccgctc acgagcagca cgtcgtcctt cgcgatcgtg cggtcgagat
      541 agggctggcc gggccacgac acctcgatca tccccgtctc gtcgcggagc acggcctgga
      601 agattcgcag cccctttctc gtcgggagga cgcccttgga gacgacgcgg ccgatgaccg
      661 tgccctgcat ccccggctcg agcgacgcga tggtcgcgac ggtgctggcg tcttcgtaac
      721 gatgcgggat gtgatagagc agatcgcccg ccgtcacgac gccgaggcga cgcagcgcct
      781 ccgctcgcgc cgggcccacg cccttgaggt aggtgaccgg cgtgtcgagc cgcagccgtt
      841 gctgccgagg agcgtcgcgc ttcactcgcc gcccagcagc tccccggcga actcgcgcgc
      901 atcgaacggc aggaggtcgc cgctctgctc gcccaccccc acgaacttca cgggcaggtc
      961 caccgcctcg tgcacggcga cgacgacgcc ccccttcgcc gtgccgtcga gcttcgtcac
     1021 cacgaggccg ctcagcggca cggcggcggc gaacatcttc gcctgctgca ccgcgttctg
     1081 accgatcgtg ccgtcgagca cgagcagggt ctcgtgcggc gcgtcgggca gccgcttcgc
     1141 gatcacgcgc gcgaccttct tcaactcggt catcagccca tcgctcgtgt gcaggcgccc
     1201 cgcggtgtcc acgatcagca cgtccacccc acgtgcgacc gcggcgtcga tcgcatcgaa
     1261 tgccaccgag gccgggtccg tgccggcgct cgcgccgacg aactcggagc cggtccgttc
     1321 ggcccacacg cgcagctgat ccaccgcacc ggcgcggaag gtgtctcccg cggcgaccat
     1381 gaccttcttt ccctcgccgc gcagccgcgc cgccagcttg ccgatgaagg tggtcttccc
     1441 cgccccgttc acgccgacga cgaggatcac gctgggcctg gtgccggaca gcgtgagcgc
     1501 cggatcgctg cgtccgctgc ggagggcgct cgtgatcccg tcgcgcagcg cgtcgaggaa
     1561 ctggtcctgg ctcttcacct tgccgagcgt cgcgaggcgc tcgacgtcgg cgacgagccg
     1621 gagcgtggtc ggcacgccga tgtccgactc cagcagcagc tcctccagcc gctccagcga
     1681 gccgccgtcc acgccaccgc gcgcgatgac ggcgacgtcc atgagcgcga cgtccttgat
     1741 cttcgcccag agcgaacgct tcgggaggtc gtcgttcttt ctcagaattc gcatatcgaa
     1801 aactacatca ccgtcgtgac gggctccgcc ctcgcgctac cggacccccg ctcgccgcct
     1861 gagcccccac tcggcgcaca gcagcagcac cgcgagggcg taggcccacc ccagcgaccg
     1921 caggcccggc gcatcgccga ccgccggcgc gtcacccacg cggcgcgtgg tgagcgtgga
     1981 ccggcgcggc accagctcgc gcgacgcatt gacggccagc accgcactgc cccccggcat
     2041 gcgcgcatcg tagatc
//
LOCUS       DASSYW010001058         4124 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1827343, whole genome shotgun sequence.
ACCESSION   DASSYW010001058 DASSYW010000000
VERSION     DASSYW010001058.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4124)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4124)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4124
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1827343"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1095)
                     /locus_tag="VFN38_16730"
     CDS             complement(<1..1095)
                     /locus_tag="VFN38_16730"
                     /inference="COORDINATES: protein motif:HMM:NF018743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1343 domain-containing protein"
                     /protein_id="HET9013472.1"
                     /translation="MHSQAGTKWVWSALLAGALGVAGTGCMTGGVGATPGRMEDAKAV
                     PVRPGISVLLSDSIGLVRGRRVGLLTNQTGIDERGVSDIERLRGEAARAAGVRLVTLF
                     SPEHGIRGTEDREDLASGIDAQSGLTVHSLYRNATIAPPDSTLRDLDVLVVDLQDIGT
                     RTWTYVGSMLYAMRAAARRHLPIVVLDRPNPLGGVAVDGPLLDPALANPDEPSAIRAG
                     RAYALYPAPLRHGMTMGELARFFNARLSIGADLHVVPMDGWRRSAWFDETGLPWVRPS
                     PNLPTLASSTTYPALVAFEGTNLSVGRGTPDAFQRFGAPWLRADAVVALLEARRLPGV
                     RFERSDFMPAAPGDRKYDGLRIPGVRIVVLD"
     gene            1237..2361
                     /locus_tag="VFN38_16735"
     CDS             1237..2361
                     /locus_tag="VFN38_16735"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HET9013473.1"
                     /translation="MHDALHDTLGAILERAVADSAFPGAIAVVGNHAGPLVTATAGHL
                     DWGPSPAPDASTIWDLASLTKVVGMTSAMMQLVESGKVDLDAPVQRYLPEWTGRNKDR
                     VTVRHLITHQSGLPAFKQYYKLGASPDSTLRLFMLTPLDTLPGVRMVYSDIGAILLGK
                     VIERVSGEPLDVYLARHVFEPLGMRDTRYRPPAELLSRIAPTERDPWRGRLLRGEVHD
                     ENAFALGGVSAHAGLFSTAHDLDRLARVYLNGGTLEGARLAGPATIRQFTTVWDSTFS
                     SRALGWDTPAKNSSGGHYLQRPAFGHTGFTGTSLWIDPQHDLYVMLLTNRVNPTRERA
                     GIASARVAIADAAVRALLPAVVSSIEARAASPSTPSTPRP"
     gene            2358..>4124
                     /locus_tag="VFN38_16740"
     CDS             2358..>4124
                     /locus_tag="VFN38_16740"
                     /inference="COORDINATES: protein motif:HMM:NF012686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:solute symporter family protein"
                     /protein_id="HET9013474.1"
                     /translation="MNLSAIDWAIVVAYFALSMGIGLVFTKKGGENIEEYFLSGRNVP
                     WWLAGASMVATTFAADTPLVVTGLVAAHGVAGNWLWWNMLMSGMLTVFFFARLWRRAK
                     VMTDVEFAEVRYSGRPAAALRGFRALYLAIPINLIILGWVTRAMIKILTISLGLRDVQ
                     FAGLTISGEILAVGICFIITVAYSAGAGMWAVLWTDLVQFVIKMAAVIVLAVFAVRAV
                     GGMDKLKAGLATHFGSADAAISVLPVSWTPSGLAAYAWMPLLTLAVFLSVQWWAAWYP
                     GAEPGGGGYVAQRIFSSKTERDGVLATLFFQVAHYAIRPWPWIITGLATVLLYPAGIG
                     PAHDHEAAYVQAFVDLLPTPWRGFMMAGFAAAYMSTVGTQLNWGASYLVNDFYKRFVN
                     KDATEKHYVSVSRWATVFLFLGSVFVTMNLQTVEGAWKFLLALGSGTGLVLILRWYWW
                     RINAWSEISAMIASFVVSIAAITAFKGRFPAGDLRADAWVMLTTVAVSTVIWVSVTFL
                     TAPEPESKLESFYQKVRPGGPGWRRISDRLGYGGESIPGGALAWTNWIAGIVAVYASL
                     FGIGKLIFGQTVTGLIMLVVAAL"
BASE COUNT          565 a         1516 c         1392 g          651 t
ORIGIN      
        1 atccagtacg acgatcctca cgccgggaat ccggaggccg tcgtacttgc gatccccggg
       61 cgccgccggc atgaagtcgc tgcgctcgaa gcgcaccccg ggaagccgcc gcgcctccag
      121 gagggccacc accgcgtcgg cccgcagcca gggcgcgccg aaccgctgga acgcatcggg
      181 ggttccgcgc ccgacgctca ggttcgtccc ctcgaaggcg acgagcgcgg gataggtcgt
      241 cgagctcgcg agcgtcggca ggttgggcga gggccggacc cacggaagcc ccgtctcgtc
      301 gaaccaggcg ctgcgacgcc acccgtccat cgggaccacg tgcaggtccg cgccgatgga
      361 cagccgcgcg ttgaagaagc gcgcgagctc gcccatcgtc attccgtgac gcagcggtgc
      421 gggatataat gcgtaggccc ggccggcacg aatcgcgctg ggttcgtccg ggttcgcgag
      481 cgccggatcg agcagcgggc catccaccgc cactcccccc agcgggttcg ggcggtcgag
      541 cacgacgatc ggaaggtgac gtcgcgccgc ggcgcgcatc gcatacagca tggagccgac
      601 gtatgtccac gtgcgcgtgc cgatgtcctg caggtccacc accagcacgt ccaggtcgcg
      661 cagcgtgctg tcgggcggcg cgatcgtcgc gttcctgtac agcgagtgca cggtgagccc
      721 gctctgcgcg tcgatcccgc tggcgaggtc ctcgcggtcc tcggtgccgc ggatgccgtg
      781 ctccggggag aacagcgtca cgagccgcac ccccgccgcg cgcgcagcct cgccgcgcag
      841 ccgctcgatg tccgagacgc cgcgctcgtc gatgccggtc tgattggtga gcagcccgac
      901 gcgacgcccg cgcacgagcc cgatgctgtc ggagaggagg acgctgatcc ccggtcgcac
      961 cggcaccgcc ttcgcgtcct ccatgcggcc gggggtggca ccgaccccgc ccgtcatgca
     1021 ccctgtgccg gccacgccca gcgccccggc cagcagcgcg ctccacaccc acttcgtccc
     1081 agcctgacta tgcatcgttg ctctcctcgt ggtcttttga cgtcgtcgct cgcgatcgcg
     1141 ctcgcggcat gcatgggggg cgcaggcgcg cagcggccgg acgagatcca agctgccgcg
     1201 ccggtccccg ccgagccagt gcggccggcc gcgtccgtgc acgacgcgct ccacgacacc
     1261 ctcggggcaa ttctcgagcg cgccgtcgcc gacagcgcct ttcccggcgc catcgccgtg
     1321 gtgggcaacc acgccggccc gctggtgacc gcgaccgccg gccacctcga ctggggcccc
     1381 tcgccggccc ccgacgccag tacgatctgg gacctcgcgt cgctcaccaa ggtggtcggc
     1441 atgacctccg cgatgatgca gctcgtggag agcggcaagg tggacctcga cgcccccgtc
     1501 cagcgctacc tgcccgagtg gacgggccgg aacaaggaca gggtcacggt gcgccacctc
     1561 atcacgcacc agtcgggact gccggcgttc aagcagtact acaagctcgg agcctcgccc
     1621 gactccaccc tccggctgtt catgctcacg ccgctggaca ccctgcccgg cgtgcggatg
     1681 gtctacagcg acatcggcgc catcctcctc ggcaaggtca tcgagcgcgt gagcggcgag
     1741 ccgctcgacg tctacctcgc gcgccacgtg ttcgagcccc tcggcatgcg cgacacccgg
     1801 taccgcccac cggcggagct gctgtcgcgc atcgcgccca ccgagcggga cccctggcgg
     1861 ggacgcctcc tgcgcggcga ggtgcacgac gagaacgcgt tcgccctcgg cggcgtgtcg
     1921 gcccacgcgg ggctcttcag caccgcgcat gacctcgacc gcctggcgcg cgtctacctg
     1981 aacgggggga ccctggaggg cgcgcgcctc gccggccccg ccaccatccg gcagttcacc
     2041 accgtgtggg actccacctt ctccagccgc gcgctcggct gggacacgcc ggcgaagaac
     2101 agctcgggcg ggcactacct gcagcggccg gcgttcggtc acaccggctt caccggcacc
     2161 tcgctctgga tcgatccgca gcacgacctg tacgttatgc tcctcacgaa tcgggtgaac
     2221 ccgacgcgcg agcgcgccgg gatcgcgtcg gcgcgcgtgg cgatcgctga cgcggccgtg
     2281 cgcgcgctcc tgccggcggt cgtgagctcc atcgaggccc gggcggcctc gccttccacc
     2341 ccctccactc cgcgtccatg aatctctcgg caatcgactg ggccatcgtc gtcgcctact
     2401 tcgcgctgtc gatgggcatc ggcctggtct tcaccaagaa gggcggcgag aacatcgagg
     2461 agtacttcct ctccggccgc aacgtcccct ggtggctggc cggcgcgagc atggtggcca
     2521 ccaccttcgc cgccgacacg ccgctcgtcg tcaccggcct cgtcgccgcg cacggcgtgg
     2581 ccggcaactg gctctggtgg aacatgctga tgagcggaat gctcaccgtg ttcttcttcg
     2641 cccggctctg gcgccgtgcc aaggtgatga ccgacgtgga gttcgccgaa gtgcgctaca
     2701 gcggccgccc cgcggccgcg ctgcgcggct tccgcgccct gtacctcgcg atccccatca
     2761 acctgatcat cctcgggtgg gtcacccgcg ccatgatcaa gatcctgacg atctcgctcg
     2821 gcctgcgcga cgtgcagttc gccgggctca cgatctcggg cgagatcctc gccgtcggca
     2881 tctgcttcat catcacggtg gcctactcgg ccggggcggg catgtgggcg gtgctctgga
     2941 ccgacctcgt gcagttcgtg atcaagatgg ccgcggtgat cgtgctcgcc gtgttcgccg
     3001 tgcgcgccgt gggcggcatg gacaagctca aggcggggct ggcgacgcac ttcggcagcg
     3061 cggacgcggc catctcggtg ctgcccgtga gctggacgcc gagcgggctc gcggcgtacg
     3121 cgtggatgcc gctgctcacg ctcgcggtgt tcctgtcggt gcagtggtgg gccgcgtggt
     3181 atccgggcgc ggagccgggc ggcggcggct acgtcgcgca gcgcatcttc tcgtccaaga
     3241 cggagcgcga cggcgtgctg gccacgctgt tcttccaggt ggcgcactat gccatccggc
     3301 cgtggccgtg gatcatcacc ggcctggcca ccgtgctgct ctacccggcc ggcatcgggc
     3361 cggcgcacga ccacgaggcg gcctacgtgc aggcgttcgt cgatctcctg ccgacaccct
     3421 ggcgcggctt catgatggcc ggcttcgcgg cggcgtacat gtccaccgtg ggcacgcagc
     3481 tcaactgggg cgcgtcgtac ctggtgaacg acttctacaa gcggttcgtc aacaaggacg
     3541 cgaccgagaa gcactacgtc tccgtgtccc gctgggcgac ggtcttcctc ttcctcggct
     3601 ccgtgttcgt cacgatgaac ctccagaccg tggagggcgc atggaagttc ctcctcgcgc
     3661 tcgggtcggg cacgggcctc gtgctgatcc tccgctggta ctggtggcgc atcaacgcgt
     3721 ggagcgagat cagcgcgatg atcgcctcct tcgtcgtgtc catcgcggcg atcaccgcct
     3781 tcaaggggcg cttccccgcc ggcgacctgc gcgccgacgc gtgggtcatg ctgaccacgg
     3841 tggccgtgag cacggtcatc tgggtgagcg tcaccttcct gaccgctccg gagccggaga
     3901 gcaagctgga gtcgttctac cagaaggttc ggccgggcgg ccccggctgg cgccgcatct
     3961 ccgaccggct gggctacggc ggggaatcga ttcccggggg tgcgctggcc tggaccaact
     4021 ggatcgccgg catcgtcgcg gtttacgcca gcctgttcgg cattggcaag ctgatcttcg
     4081 gacagactgt gaccgggctg atcatgctgg tcgtggcagc actc
//
LOCUS       DASSYW010001059         2411 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1208922, whole genome shotgun sequence.
ACCESSION   DASSYW010001059 DASSYW010000000
VERSION     DASSYW010001059.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2411)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2411)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2411
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1208922"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..336)
                     /locus_tag="VFN38_16745"
     CDS             complement(<1..336)
                     /locus_tag="VFN38_16745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013475.1"
                     /translation="MADQPEFGPLDVTDFTVGAMLRAGVAIRRAVRGTDSLEGAANAI
                     VRYLHESCVGASGSRSCALVRFYKTDRYGALDPDLQRFAAAQLGELPPYADMRCLTLL
                     ATAGDDPAWN"
     gene            471..1712
                     /locus_tag="VFN38_16750"
     CDS             471..1712
                     /locus_tag="VFN38_16750"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HET9013476.1"
                     /translation="MPPDQKSGVVPEAVERATRAGDSTLAPDVSVRAKANAAPSDAPA
                     PSLERTVEAMERPRSRSIEATLLTVLAVLYTMYFARGFLIPIVFALLLNFLLSPLIRR
                     LAKYRVKPPLGAGLVVILLLAGIGWGAYELATPAQRWAAIAREAFAKAQGKLRGIIRP
                     MQQVSRNVEQAASAVGGPSDKAPEVMVQSGPSLTSRLFGTTQRIIGGLLEIFILLYFL
                     LAGGDLFLQKLIKVLPNVSDKVKAVDIARATEATVSAYLTTTLLVNLVEGAMVALVLW
                     LLGMPSAVLWGVLVFFLEFVPYLGAATALVVLGVAGLTTFDQLARALLVPGSFLAINM
                     LQANLVTPLLLGHRLTLNPVAIFTGLAFFYWIWGVPGAFVAVPVLATFKIFCDNIEAL
                     AAIGEFLGQRDEDERRSVARV"
     gene            complement(1761..2144)
                     /locus_tag="VFN38_16755"
     CDS             complement(1761..2144)
                     /locus_tag="VFN38_16755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013477.1"
                     /translation="MSPRRTPPPPDDDPLAGFELPPEIMSQTLEHAISDDATVSHELG
                     HAVAARLQQTLKGSTVEYGFPGIVTVHLKSGAVARCGGPALGWMVDVVRRPGAETDTL
                     DVDVADDETDPVRIADALAKVLKRR"
BASE COUNT          326 a          848 c          862 g          375 t
ORIGIN      
        1 gttccatgcg gggtcgtcgc ccgccgtggc gagcagcgtg aggcaccgca tgtccgcgta
       61 gggcgggagc tcgccgagtt gcgccgccgc gaaccgctgg aggtcggggt ccagcgctcc
      121 gtagcgatcc gtcttgtaga accgcacgag cgcgcacgag cgcgagccgc tcgccccgac
      181 gcagctctcg tgcagatagc gcacgatggc gttggccgcc ccctccaggc tgtccgtgcc
      241 gcgcacggcg cggcggatcg cgacgccggc gcgcagcatc gcccccaccg tgaagtcggt
      301 cacgtccagc ggtccgaact cgggttggtc tgccatgccg ccgtcgtcgt gatgggaagg
      361 aggccgaagc tggccagccg cgcgtcgaag atgctccgcc cgccctcgtt ttcacaagcg
      421 gacggcggga gcggtctgga cggcaagcaa cgtgcatcgt tggcgacgac atgccacccg
      481 atcagaagtc cggcgtcgtg ccggaagccg tggagcgcgc cacgcgcgcc ggcgattcca
      541 cgctcgcgcc cgacgtgagc gtgcgtgcga aggccaatgc cgcgccgtcc gacgcgcccg
      601 cacccagcct cgagcgcacg gtggaggcga tggagcggcc gcgcagccgc tcgatcgagg
      661 cgacgctgct cacggtgctc gccgtgctgt acacgatgta cttcgcgcgc ggcttcctca
      721 tcccgatcgt cttcgcgctg ctgctcaact tcctgctcag cccactgatc cggcgcctgg
      781 cgaagtatcg cgtgaagcca ccgctcggtg cggggctcgt cgtgatcctg ctgctggcgg
      841 gcatcggctg gggggcctac gagttggcga cgcccgcgca gcgatgggcc gccatcgcgc
      901 gggaggcctt cgccaaggcc cagggcaagc tgcgcgggat catccgtccc atgcagcagg
      961 tgtcgaggaa cgtcgagcag gcggcgagcg cggtaggagg acccagcgac aaggcgccgg
     1021 aggtgatggt acagtcgggg ccgagcctca cctcgcgcct gttcggcacg acgcagcgga
     1081 tcatcggtgg cctgctcgag atcttcatcc tcctctactt cctgctcgcg gggggcgacc
     1141 tcttcctgca gaagctgatc aaggtgctgc ccaacgtgag cgacaaggtg aaggcggtgg
     1201 acatcgcgcg cgccaccgag gccacggtgt cggcgtacct cacgaccact ttgctggtga
     1261 acctcgtcga gggcgcgatg gtcgcgctcg tgctctggct cctgggcatg ccgagcgcgg
     1321 tgctgtgggg tgtgctcgtg ttcttcctgg agttcgtccc ctatctcggg gccgccacgg
     1381 cgctcgtggt gctcggcgtc gccggcctca cgaccttcga tcagcttgcc cgcgcgctgc
     1441 tcgtgcccgg aagcttcctc gccatcaaca tgctccaggc gaatctcgtc acgccgctgc
     1501 tgctggggca ccggctcacg ctgaacccgg tggcgatctt caccgggctc gccttcttct
     1561 actggatctg gggcgtgccg ggtgcgttcg tcgccgtgcc cgtgctggcg acgttcaaga
     1621 tcttctgcga caacatcgag gcgctggcgg ccatcgggga gttcctcggc cagcgcgacg
     1681 aggacgagcg gcgcagcgtc gcgcgagtgt agccggaagc ggtgcggcaa ccgccgctcc
     1741 gcctcggcgc gcgcggaccg tcaccgtcgc ttgagcacct tcgccagcgc atcggcgatg
     1801 cgcaccgggt cggtctcgtc gtccgcgaca tcgacgtcca gcgtgtcggt ctccgcaccg
     1861 ggccggcgca cgacgtccac catccagccc agtgccggcc cgccgcagcg cgccaccgcg
     1921 cccgacttga gatggaccgt gacgataccc gggaagccgt actccacggt gcttcccttc
     1981 agcgtctgct gaagccgcgc ggccacggcg tgaccgagct cgtggctcac ggtcgcgtcg
     2041 tcgctgatgg cgtgctccaa cgtctggctc atgatctccg gcggcagctc gaaacccgcg
     2101 agcgggtcgt cgtcgggcgg cgggggggtg cggcggggag acatggcggt gacctgagcg
     2161 gcgaatggat gtgggcgggc gcgctcgtcc agtatcggct cgaacggcgc gggagacaac
     2221 ggcggcgtgc gcgccgagac cctcgcgcgg gcggaaccgg agagggtgcc ggcccctggc
     2281 cgtcccgcgc ggctatcgcg cggcggccgg ttgcggccgg caccccgagg gcttgaggtc
     2341 cggcgccgtc aggtcgaacg cgccctgcag gagcagcaga ccgatcgccg tcgcgccgac
     2401 cgccgcccat c
//
LOCUS       DASSYW010001060         3193 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_160632, whole genome shotgun sequence.
ACCESSION   DASSYW010001060 DASSYW010000000
VERSION     DASSYW010001060.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3193)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3193)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3193
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_160632"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(48..737)
                     /locus_tag="VFN38_16760"
     CDS             complement(48..737)
                     /locus_tag="VFN38_16760"
                     /inference="COORDINATES: protein motif:HMM:NF012698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HET9013478.1"
                     /translation="MLLIHPPIATVAIVATARTAALLGDAVGDEATSVVRREPTAAGR
                     LATDGWERPDVLLVDRDVLADLPREIWHVRRRWPTVIIAIIGAHDEVEAERMLDAGAD
                     DVIIAGSGLLRARLLAMTRRARTVNAGSRIAIGDIVFDREARRVWCNGSEVPVTRREC
                     AVIDCLFWNSPRPVGVSTLADFVWGDTSVADRRNVIDVYIGYVRRKLSASRTVVLRTV
                     RGVGYSFAPRD"
     gene            971..1789
                     /locus_tag="VFN38_16765"
     CDS             971..1789
                     /locus_tag="VFN38_16765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00266 family protein"
                     /protein_id="HET9013479.1"
                     /translation="MSQTSDVLDYELIGDDLQAVIVTLDPGETVIAEAGAMMFMEQGI
                     EMNTTLDPNKQGGGMLGTLFSGAKRVLSGDTFFITTFANGAGTRRSVAFSSHFPGKIR
                     PVDLREWGGTIIAQKDAFLCAPRGTNIDVAFTRRIGAGFFGGEGFILQRITGDGVAVL
                     HASGALWEKTLAPGEVLRVDTGCIVAMEQRVGYDIQMVPGIKTALFGGEGLFFATLTG
                     PGRIMLQTMPFSRLADRILAAAPRAGGRQMQEGSMLGGAVLGSVLGGVLGNRDG"
     gene            1867..2472
                     /gene="pdxH"
                     /locus_tag="VFN38_16770"
     CDS             1867..2472
                     /gene="pdxH"
                     /locus_tag="VFN38_16770"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: protein motif:HMM:NF004231.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004733 - pyridoxamine phosphate oxidase
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase"
                     /protein_id="HET9013480.1"
                     /translation="MPDTRAPIAEPFLRFHDLLAAAQALDRAVLPEPTAFALGTVGPE
                     GQPSVRILLLKGADERGFVFYTNHQSRKGSELLAHPRAAMCFHWQQLERQVRVEGSVR
                     PVADQEADAYFATRERGSQLGAWASLQSQPIAQPGDLEARLAEIEARFAGVTVPRPPH
                     WSGFRLVPHRIEFWQNMPSRLHERHAYHREADGWRVEVLYP"
     gene            2510..>3193
                     /locus_tag="VFN38_16775"
     CDS             2510..>3193
                     /locus_tag="VFN38_16775"
                     /inference="COORDINATES: protein motif:HMM:NF014803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013481.1"
                     /translation="MATQTVEPTSTAPADAAWTIEKARTLYNIEGWGAGFFDIDERGH
                     VVVRPDKEHPDRQLSLHDLANDLEEQGVALPVLLRFSDILRSRIEALSERFANAIAEY
                     EYEGGYTTVYPIKVNQQRHVVEEIVQFGNKHGVGLECGSKPELQAVLGLSESTEHLIV
                     CNGYKDEEFMRLALMGQKLGHQVFIVIEQLSEIDVLLSAAEELGVVPNAGIRIKLASS
                     GYGRWKESGG"
BASE COUNT          481 a         1114 c         1172 g          426 t
ORIGIN      
        1 cccggcaggg cagcagggac cgcgacgcgg ccgaggagcg gacgatctca atctctcggc
       61 gcgaagctgt atcctacgcc ccggacggtg cggagcacca ccgtgcggct cgcgctgagc
      121 ttgcgccgca cgtagccgat gtacacgtcg atcacgttgc ggcggtcggc cacggaggtg
      181 tcgccccaca cgaagtcggc cagggtgctg actcccacgg ggcggggcga gttccagaag
      241 agacagtcga tcaccgcgca ctcgcgccgc gtcaccggca cctcggaacc gttgcaccag
      301 acgcggcgcg cctcgcggtc gaacacgatg tcgccgatgg cgatgcgcga gccggcgttc
      361 accgtgcgcg cccggcgcgt catcgccagc agccgggcgc ggagcagccc ggagcccgcg
      421 atgatgacgt cgtcggcacc ggcgtcgagc atcctctcgg cctcgacctc gtcgtgggca
      481 ccgatgattg cgatgatgac cgtgggccag cgccgccgca cgtgccagat ctcgcggggc
      541 aggtccgcaa ggacgtcgcg gtccaccagc agcacgtcgg ggcgctccca gccgtcggtc
      601 gccagccggc ccgcggcggt gggctcgcgc cgcacgaccg acgtggcctc gtcgcccacg
      661 gcgtcgccca gcagcgcggc ggtgcgggcg gtggcgacga tggccaccgt ggcgatgggc
      721 gggtggatga gcagcatggc cgctggtgga gagggccggc gggcgcgact cggcgcccgg
      781 gggagacgat agcgcgcccg gaaccggggc gcaaatggcc gtccggcgcg ggcgcccggt
      841 cggcgggcgg aggctagatt cgaggtcgcg gtacgggccc cgcccgcgcg acggccggcc
      901 ggcgaaaccg ccgcccgctc gccgccgtcg ggagggtgcg acacccacac cacatcagga
      961 gcgccacgcg atgagccaga cctccgacgt gctcgactac gagctgatcg gcgacgacct
     1021 tcaggcggtg atcgtgaccc tcgatccggg cgagacggtg atcgccgagg cgggcgcgat
     1081 gatgttcatg gagcagggga tcgagatgaa cacgacgctc gatcccaaca agcagggggg
     1141 cgggatgctc ggcacgctct tctcgggcgc caagcgcgtg ctctccggcg acaccttctt
     1201 catcacgacc ttcgccaacg gcgcgggcac gcggcgcagc gtcgccttct cgtcgcactt
     1261 ccccggcaag atcaggccgg tggatcttcg cgagtggggc gggacgatca tcgcgcagaa
     1321 ggacgccttc ctgtgcgcgc cgcgcggcac gaacatcgac gtcgcgttca cgcggcgcat
     1381 cggcgccggc ttcttcgggg gggagggatt catcctgcag cgcatcacgg gcgacggcgt
     1441 ggcggtgctg cacgcgtcgg gggcgctgtg ggagaagacc ctcgcgccgg gcgaggtgct
     1501 gcgcgtcgac accggctgca tcgtggcgat ggagcagcgg gtgggctacg acatccagat
     1561 ggtgccgggg atcaagaccg cgctgttcgg cggcgagggt ctcttcttcg ccacgctcac
     1621 cggaccgggt cgcatcatgc tccagacgat gcccttctcg cggctcgccg accggatcct
     1681 cgccgccgcg ccccgtgccg ggggccgcca gatgcaggag ggcagcatgc tgggcggcgc
     1741 ggtgctgggg agcgttctcg gaggcgtcct cgggaatcgg gacggctgag ggatcggcga
     1801 cccgatcgca ggtcaccgag cggaggcggc gtgacgacgc gcgccggggc gctgtagatt
     1861 ccgcgcatgc ccgacacccg tgcgcccatc gccgagccgt tcctccgctt ccacgacctg
     1921 ctcgccgcgg cgcaggcgct ggatcgcgcc gtcctccccg agcccacggc cttcgccctc
     1981 ggcaccgtgg gcccggaggg ccagccctcc gtgcgcatcc tcctcctcaa gggcgccgac
     2041 gagcgggggt tcgtcttcta caccaatcat cagagccgga aggggagcga gctgctcgcg
     2101 cacccgcggg cggcgatgtg cttccactgg cagcagctcg agcggcaggt gcgcgtggaa
     2161 gggtcggtcc gccccgtcgc ggaccaggag gccgacgcgt acttcgccac gcgggagcgc
     2221 gggagccagc tcggcgcgtg ggcgtcgctc cagagccagc ccatcgcgca gccgggcgac
     2281 ctcgaggcgc ggctcgccga gatcgaggcg cgtttcgccg gcgtcaccgt cccccggccg
     2341 ccgcactggt ccggcttccg cctcgtgccg caccggatcg agttctggca gaacatgccg
     2401 agccggctcc acgagcggca cgcctaccat cgggaggccg acgggtggcg ggtcgaggtg
     2461 ctgtacccct gaactgcggc cccgccgtcc gatcgcttat ctttcgccca tggcgactca
     2521 gacggtagaa ccgacctcca ccgcgcccgc ggacgcggcg tggaccatcg agaaggcgcg
     2581 cacgctctac aacatcgagg gctggggcgc gggcttcttc gacatcgacg aacgcgggca
     2641 cgtggtcgtc cggcccgaca aggagcatcc ggatcggcag ctcagcctcc acgacctggc
     2701 gaacgacctc gaggagcagg gggtcgcgct gcccgtgctg ctgcgcttct cggacatcct
     2761 ccgctcgcgg atcgaggcgc tgagcgagcg gttcgccaac gcgatcgcgg agtacgagta
     2821 cgagggcggc tacaccacgg tctacccgat caaggtcaac cagcagcgcc acgtcgtcga
     2881 ggagatcgtc cagttcggca acaagcacgg cgtgggcctc gagtgcggct ccaagccgga
     2941 gctccaggcc gtgctggggc tgtccgagag caccgagcac ctcatcgtgt gcaacggcta
     3001 caaggacgag gagttcatgc gcctcgccct catggggcag aagctggggc accaggtctt
     3061 catcgtcatc gagcagctca gcgagatcga cgtgctgctc agcgcggcgg aggagctggg
     3121 cgtggtcccg aacgccggga tccggatcaa gctcgcgagc agcggctacg gccggtggaa
     3181 ggagagcggc ggc
//
LOCUS       DASSYW010001061         2210 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1319701, whole genome shotgun sequence.
ACCESSION   DASSYW010001061 DASSYW010000000
VERSION     DASSYW010001061.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2210)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2210)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2210
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1319701"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..297)
                     /locus_tag="VFN38_16780"
     CDS             complement(<1..297)
                     /locus_tag="VFN38_16780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013482.1"
                     /translation="MIPRFLSVRRAAGAVARSVLGLALLAAAPAWAGAQRVDSARVAP
                     ARPPVPDSGVRPVATPPLTPRRAFLYSLLLPGYSQSVLGRTTAGAIFVLSESIAI"
     gene            complement(334..428)
                     /locus_tag="VFN38_16785"
     tRNA            complement(334..428)
                     /locus_tag="VFN38_16785"
                     /product="tRNA-Sec"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(392..394),aa:Sec,seq:tca)
     gene            complement(435..1403)
                     /gene="selD"
                     /locus_tag="VFN38_16790"
     CDS             complement(435..1403)
                     /gene="selD"
                     /locus_tag="VFN38_16790"
                     /EC_number="2.7.9.3"
                     /inference="COORDINATES: protein motif:HMM:NF002098.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004756 - selenide, water dikinase
                     activity [Evidence IEA];
                     GO_process: GO:0001887 - selenium compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="selenide, water dikinase SelD"
                     /protein_id="HET9013483.1"
                     /translation="MGPGDLAQALSGVPTHADPRVLVGRESFDDAGVFVLRDDLALVQ
                     TVDFFAPIVDDPYEFGQIAAANALSDVFAMGGEPLTALAIVAFPAGSLPMSVLTDILR
                     GGQDKVREAGAVLVGGHSIIDEELKFGLSVTGQADPRRLLTNTAARPGDVLVLTKPLG
                     TGLLATAAKQGRLDATAQEALHASMRTLNAAASRAALAAEVRCATDITGFGLLGHATH
                     VARASGVTLRFVANSLPELAGAAAHWRAGVRTGGAERNESYVAPLAEWAGVDPAAVAL
                     ALDPQTSGGLLLAVPPARVEGYLSAVAGSAVIGVVESRGAALVVLE"
     gene            complement(1512..1901)
                     /locus_tag="VFN38_16795"
     CDS             complement(1512..1901)
                     /locus_tag="VFN38_16795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HET9013484.1"
                     /translation="MSTQTVHTNEAPAAIGPYSQGIVANGFLFTAGQIALDPGSGQVV
                     AGDVVAQTEQVFRNLGAILGTTGASWQDVVKATVYLMDMHDFPKVNEVYARVMGDARP
                     ARSTVQVAGLPRGVLVEIDLVAVVPPR"
     gene            complement(1974..>2210)
                     /locus_tag="VFN38_16800"
     CDS             complement(1974..>2210)
                     /locus_tag="VFN38_16800"
                     /inference="COORDINATES: protein motif:HMM:NF013213.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HET9013485.1"
                     /translation="IVTFRKWTDEALLRLVPEDRLLVESDAPYLAPVPRRGKRNEPAW
                     VAFTVARLADVRGTDAATLGARTADNARRLFGLA"
BASE COUNT          331 a          751 c          852 g          276 t
ORIGIN      
        1 gatggcgatg gactcgctca gcacgaagat cgcgccggcg gtggtgcggc cgagcaccga
       61 ttgcgaatac cccggcagca ggagcgagta gaggaaggcg cggcgcgggg tgaggggggg
      121 agtggcgacg gggcggacac cgctgtccgg cacgggcggg cgggccggtg ccacgcgcgc
      181 gctgtccacc cgctgcgcgc cggcccaggc tggcgccgcc gcgagcagcg cgaggccgag
      241 cacggagcgc gcgacggcac cggctgcccg gcggacggag aggaagcgag ggatcacggt
      301 gtgcgagtcg ggcgaacgag tgaagggacg tgctggcggg agtgcatggg aatcgaaccc
      361 acccaagacg cgatgcgcct cgcagtcgtt ttgaagacga cgggagccac caggcaccat
      421 ccactccccg atgctcactc cagcactacc agcgcggcac cgcgagactc gacgactccg
      481 atgacggcgc ttcccgcaac ggcggaaaga tagccctcga cgcgcgccgg gggcacggcg
      541 agcaggagcc cgcccgaggt ctggggatcg agcgccagcg ccacggcggc ggggtcgacc
      601 cccgcccact cggccagggg ggcgacgtag ctctcgttgc gttccgcgcc cccggtgcgg
      661 actccggcgc gccagtgcgc ggcggcgccg gcgagctccg gaaggctgtt cgccacgaaa
      721 cgcagcgtga cgccgctcgc gcgcgccacg tgcgtcgcgt ggcccagcag gccgaacccg
      781 gttatgtcgg tggcgcagcg cacctccgcc gcgagcgccg cccggctcgc cgccgcgttc
      841 agggtgcgca tgctcgcgtg cagcgcctcc tgtgcggtcg cgtcgaggcg tccctgcttg
      901 gcggcggtcg ccagcaggcc ggtgccgagc ggcttggtga gcaccaggac gtcaccgggg
      961 cgagcggcgg tgttcgtgag aaggcggcgc ggatcggcct ggccggtgac gctgagcccg
     1021 aacttcagct cctcgtcgat gatcgagtgt ccgccgacga gcacggcgcc cgcctcgcgc
     1081 accttgtcct ggccgccgcg caggatgtcg gtgagcaccg acatcgggag gctgccggcg
     1141 ggaaaggcga cgatggcgag cgcggtgagc ggctcgccgc ccatggcgaa gacgtcggac
     1201 agggcgttgg cggcggcgat ctggccgaac tcgtacggat cgtcgacgat gggggcgaag
     1261 aaatccaccg tctgcacgag cgcgaggtcg tcgcgcagca cgaagacccc cgcgtcgtcg
     1321 aagctctctc gaccgaccag cactcggggg tcggcgtgcg tcggcacgcc gctcagcgcc
     1381 tgcgccaggt cacccggacc cagtttggcg gctcaaccag cgcaccgggc gaagctcgtc
     1441 aggcgaaaga gctcctcccg ggttcggctc gtcgacatgg cgtcgggtgc gggtgggtgg
     1501 atggccgcgc ctcagcgcgg ggggacgacg gcgacgaggt cgatttccac gaggacgccg
     1561 cgcggcaggc cggccacctg gacggtggag cgggcaggcc gcgcgtctcc catgacgcgg
     1621 gcgtatacct cgttgacctt cgggaagtcg tgcatgtcca tcaggtagac ggtcgccttc
     1681 acgacatcct gccagctcgc gccggtggtg ccgagaatcg ccccgaggtt gcggaacacc
     1741 tgctcggtct gggcgacgac gtcgccggcg acgacctgcc ccgaccccgg atcgagggcg
     1801 atctgcccgg cggtgaagag gaagccgttg gcgacgatgc cctgcgaata ggggccgatg
     1861 gcggcgggag cttcattggt gtggacggtc tgcgtcgaca acgcgattct ccttggcgga
     1921 cgagaaagga cgcggggcgc ggccccgcgg cggattctag cgggtgggcg gggctacgcc
     1981 agcccgaaca accggcgcgc gttgtccgcc gtgcgcgcgc ccagggtggc cgcatcggtg
     2041 ccgcgcacat cggcgagccg cgcgacggtg aaggcgaccc acgccggctc gttccgcttg
     2101 ccgcgccgcg gcacgggggc gagatacggc gcgtccgact ccacgagcag ccggtcctcg
     2161 ggcacgagcc gcagcagcgc ttcgtcggtc cacttccgga atgtcacgat
//
LOCUS       DASSYW010001062         2548 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_29754, whole genome shotgun sequence.
ACCESSION   DASSYW010001062 DASSYW010000000
VERSION     DASSYW010001062.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2548)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2548)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2548
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29754"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..920
                     /locus_tag="VFN38_16805"
     CDS             <1..920
                     /locus_tag="VFN38_16805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013486.1"
                     /translation="CHDITVFPEVGLAAGACAGNGILLDISDPVRPVRLDAATDKNFA
                     YWHSATFSNDGAKVLFTDEWGGGTQARCQATDRPQWGADAVYTLANRKLEPAGFYKLP
                     APQSATENCVAHNGSLIPVPGRDIMVQAWYQGGISVFDFSDPTHPTEIAFFDRGPMSA
                     TELTLGGYWSAYWYNGRIVGSEIGRGLDVLELAPSEYLSKNEIAAARLVHMDRFNPQL
                     QTRLTWPASFVVARAYLDQLTRGNGLPRARTTRIARDLDRAEKLKATPRRAALTQLAA
                     RLDRDLPAASDSTRVRALAGAVRALAAKR"
     gene            1078..1533
                     /gene="mscL"
                     /locus_tag="VFN38_16810"
     CDS             1078..1533
                     /gene="mscL"
                     /locus_tag="VFN38_16810"
                     /inference="COORDINATES: protein motif:HMM:NF001843.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008381 - mechanosensitive monoatomic ion
                     channel activity [Evidence IEA];
                     GO_process: GO:0034220 - monoatomic ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="large-conductance mechanosensitive channel
                     protein MscL"
                     /protein_id="HET9013487.1"
                     /translation="MWKDFKAFVMRGNVMDLAVGVIIGAAFGAVIKSLVDDLIMPVIG
                     LVTGGVDFSDKYALLKAGATAPPPYPTLAAAKAAGAVVLSYGTFINTVITFLIVALAV
                     FMLVRVVNRLYKHPAEPTPDTRPCPYCTMTIARAATRCPNCTSQIGAAA"
     gene            complement(1555..2031)
                     /locus_tag="VFN38_16815"
     CDS             complement(1555..2031)
                     /locus_tag="VFN38_16815"
                     /inference="COORDINATES: protein motif:HMM:NF024854.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HET9013488.1"
                     /translation="MSPRLTDEIRQGRPFRSAEQEAHLSVSRTAAMLDHSFAELVKPY
                     GVTPTQYNVLRILQGAGPQGLCRNDVRDRLVARVPDASRLLDRLEEMGLVARERDRED
                     RRLVHARITPRGEDVLARLETPVDEIHRRQFGQLSEEELRSLIGMLERVRSAIAAG"
     gene            complement(2063..>2548)
                     /locus_tag="VFN38_16820"
     CDS             complement(2063..>2548)
                     /locus_tag="VFN38_16820"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HET9013489.1"
                     /translation="LGLPLALAIIGGEPARFAPLVGLYRETLRRAGRDPGSLPVSINS
                     HVFVGDDSQRAADDFYPSYAGAMTRIGRERGWPAMTRQQYEALRAPRGALAVGSPQQV
                     IDKILYQHELFGHQRFLAQLTVGAMPHDKVMRAIELLGSVVAPVVRRETARREADRRG
                     A"
BASE COUNT          347 a          970 c          863 g          368 t
ORIGIN      
        1 agtgccacga catcaccgtg tttccggagg ttggcctggc tgcaggtgcg tgcgccggca
       61 atggcatcct gctggacatc tccgatccgg tgcggccagt ccgtctggat gccgccactg
      121 ataagaactt cgcctactgg cattcggcga ccttcagcaa cgacggcgcg aaggtgctgt
      181 tcaccgacga gtgggggggc ggcacgcagg cgcgctgcca ggccaccgac cgtccgcagt
      241 ggggcgccga cgcggtctac acgctcgcca accgcaagct cgagccggcg ggcttctaca
      301 agctccccgc cccgcagtcg gccaccgaga actgcgtcgc gcacaacggc tcgctgatcc
      361 cggtgccggg ccgcgacatc atggtgcagg cctggtatca gggcggcatc tcggtgttcg
      421 acttctccga tccgacgcat cccaccgaga tcgccttctt cgaccgcggc ccgatgagcg
      481 ccaccgagct gacgctcggc ggctactggt cggcctactg gtacaacggc cgcatcgtcg
      541 gctccgagat cggccgcggg ctcgacgtcc tcgagctcgc gccgagcgag tacctctcga
      601 agaacgagat cgccgccgcg cggctcgtgc acatggaccg cttcaacccg cagctgcaga
      661 ccaggctcac ctggccggcg agcttcgtcg tggcgcgcgc ctacctcgac cagctcacgc
      721 gtggcaacgg cctgccgcgt gctcgcacga cgcgcatcgc gcgtgacctc gaccgggcgg
      781 agaagctcaa ggccaccccg cggcgtgccg cgctgaccca gctcgccgcg cgcctcgatc
      841 gcgacctgcc ggccgccagc gactcgacgc gcgtgcgcgc gctcgccggc gccgttcgcg
      901 cgctggccgc gaagcgctga tcgacggggg tcgtcggacg ccgcgcccca tcggcgtacg
      961 acggccactc tcggctcctg ctccaccact tcggacggcc ggcgccctgg cgcgccggcc
     1021 gttcgcgtgt aggattgccc gcgcgggacg gagcggcccc ttctaggagg tgggacgatg
     1081 tggaaggact tcaaggcgtt cgtgatgcgc ggcaacgtca tggacctggc ggtcggcgtc
     1141 atcatcggcg ccgccttcgg cgcggtgatc aagtcgctgg tggacgacct gatcatgccc
     1201 gtcatcggtc tcgtcaccgg gggggtggac ttcagcgaca agtacgcgct gctgaaggcc
     1261 ggcgcgaccg cccccccgcc ctacccgacg ctcgccgcgg cgaaggccgc cggcgcggtg
     1321 gtgctctcct acggcacctt catcaacacc gtcatcacct tcctcatcgt cgcgctggcg
     1381 gtcttcatgc tcgtgcgcgt cgtgaaccgg ctctacaagc atcccgccga gccgacgccc
     1441 gacacgcgcc cctgcccgta ctgcacgatg acgatcgcgc gggcggccac gcgctgcccc
     1501 aactgcacct cgcagatcgg cgccgccgcc tgagcgtcgc ggcggggcgg gcgctcagcc
     1561 ggcggcgatc gcgctccgga cgcgctcgag catcccgatc agcgagcgga gctcctcctc
     1621 gctcagctgc ccgaactgcc ggcggtggat ctcgtccacc ggcgtctcga ggcgcgccag
     1681 cacgtcctcc ccgcgcggcg tgatccgcgc gtgcacgagc cgccggtcct cccggtcccg
     1741 ctcgcgcgcg accaacccca tctcctcgag gcggtcgagg aggcgggacg cgtcggggac
     1801 tcgcgccacc aggcggtcgc ggacgtcgtt gcggcagagc ccttgcggac cggcgccctg
     1861 gaggatccgc agcacgttgt actgcgtcgg ggtcacgccg tacggcttca cgagctcggc
     1921 gaagctgtga tcgagcatcg ccgccgtccg gctgacgctc agatgcgcct cctgctccgc
     1981 cgaccggaac ggccggccct gcctgatctc gtcggtgagg cgtggcgaca tgcgcggacc
     2041 ataggagccg cgccccacgc ggtcaagcgc cgcgccggtc cgcctcgcgc cgcgccgtct
     2101 cgcgccgcac caccggcgcg accacgctgc ccagcagctc gatggcccgc atgaccttgt
     2161 cgtggggcat cgcgcccacc gtcagctggg cgagaaagcg ctgatggccg aacagctcgt
     2221 gctggtagag gatcttgtcg atcacctgct gcgggctgcc gacggcgagc gcgccgcgcg
     2281 gcgcccgcag cgcttcgtac tgctggcgcg tcatcgccgg ccacccgcgc tcgcggccga
     2341 tccgcgtcat cgcgccggcg tacgagggat agaagtcgtc ggccgcccgc tgcgagtcgt
     2401 cgccgacgaa gacgtgcgag ttgatgctca ccggcagact cccggggtcc cggccggccc
     2461 ggcgcagcgt ctcccggtac aggcccacga ggggggcgaa ccgtgccggc tccccgccga
     2521 tgatcgccag cgccagcggc agtcccag
//
LOCUS       DASSYW010001063         2194 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1356499, whole genome shotgun sequence.
ACCESSION   DASSYW010001063 DASSYW010000000
VERSION     DASSYW010001063.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2194)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2194)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2194
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1356499"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(219..551)
                     /locus_tag="VFN38_16825"
     CDS             complement(219..551)
                     /locus_tag="VFN38_16825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013490.1"
                     /translation="MSKARYLPATRVRAGSLRLGRLSVRGSDGHEMGKLKGFILGEGE
                     RSIRSLVVEGQTAELEVPMTPMQVDATSRSLWLLGGSLAQAVPFAADRVPEIEDSELW
                     VPLFTTAA"
     gene            730..1533
                     /locus_tag="VFN38_16830"
     CDS             730..1533
                     /locus_tag="VFN38_16830"
                     /inference="COORDINATES: protein motif:HMM:NF012695.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HET9013491.1"
                     /translation="MKAVILARGKGTRMQRASQRASGDAAQARVADSGVKGMIPFRRP
                     FLDYVLSALADAGCNEVCLVIAPGPSIIRDHYDAHPAERVRVSFAVQEEPLGTANAVL
                     AARAFAGADAFLVLNADNYYPVDVLRALAALDGPGLPAFQRSALIALGNIDPERVRSY
                     AMLTIDAHGDLVDIIEKPDAATFARFGDDVPVSMNCWRFDTSIFEACARIQASARGEL
                     ELPNAVRYAVRTMALRFRTIPVAAGVLDLSSREDIAEVERRLAHVDPRP"
     gene            1514..>2194
                     /locus_tag="VFN38_16835"
     CDS             1514..>2194
                     /locus_tag="VFN38_16835"
                     /inference="COORDINATES: protein motif:HMM:NF012509.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactokinase family protein"
                     /protein_id="HET9013492.1"
                     /translation="MSIHVPDAGDLEPRLAAGGMHGLPARQAAARFAHLLQRFAGSGS
                     REPWSAWFVPGRIEVLGKHTDYAGGRSLICAVERGICAIAAARSDDLLTVTDIPRESS
                     IAVRAGDAHAAVNWGTYPLTVLRRVVRNFPGPLRGADIFIDSDLPSAAGLSSSSALMI
                     AVLLALERVNGLDASPAWKASIASAADLAAYAATIENGSGFKSLAGERGVGTEGGSQD
                     HTAILCSVR"
BASE COUNT          336 a          744 c          763 g          351 t
ORIGIN      
        1 gacgtggagg tcaggggtga ggacgaggta aaggccagga gcggactcaa aaaggaggcg
       61 gaagtccggc gcgtcctgcc atgaccggtg cgtggccaag acgctatgtt aaaccaggcc
      121 ccagcgggcg gccgcggcct gcgcgtccct cgagctgcgc agtcgtgcgc cctgctcacc
      181 gagcagaagc gcacgcgcgt tttaggaatg acgaaggatt aggcggcggt ggtaaagagg
      241 ggaacccaga gctcggagtc ttcgatctcg ggcacacggt cggcggcgaa aggaactgcc
      301 tgcgcgagtg aaccgccgag cagccagagc gatcgcgacg tcgcgtcgac ctgcatcggt
      361 gtcatcggca cttcgagctc ggcggtctgc ccttcgacga cgagactgcg gatggagcgc
      421 tcgccttctc cgaggatgaa tcccttgagc ttgcccatct cgtggccgtc gctaccgcgg
      481 acgctcaaac ggccgaggcg caggctgcct gccctgactc gagtcgctgg aagatagcgc
      541 gctttgctca tgtgtccgtc ctctctccgc catgggttgt ggcaaatcga gtaccagccg
      601 gcaatcgcgc aaatctggcc ggtttccgag gcttgcgggg atcgggtgtg ccactgtagg
      661 ctgtcgattt catacacgtt ggtcgccctt gaccaggggc taccccgact ggagacccag
      721 gcttcgacca tgaaagccgt catcctggca cgaggcaagg ggacgaggat gcagcgggcg
      781 tcccagcgtg cgagcggcga cgcggcgcag gcgcgcgtcg ccgacagcgg cgtaaagggg
      841 atgattccct ttcgccgtcc gttcctcgac tacgtcctga gcgcgctggc ggacgccggc
      901 tgcaacgagg tctgcctggt gatcgcgccg ggcccgagca tcattcgcga tcactacgat
      961 gcgcacccgg ccgaacgcgt gcgcgtgagc ttcgcggtgc aggaggagcc gctcggcacc
     1021 gccaatgccg tgctcgccgc ccgggcgttc gccggcgccg atgcgttcct ggtgctgaac
     1081 gccgacaact actatcctgt cgacgtcctg cgcgcgctcg ccgcgctcga cggtcccggg
     1141 ctgccggcgt tccagcgctc cgccttgatc gcgctgggca acatcgatcc ggagcgcgtc
     1201 cgctcgtacg cgatgttgac gatcgatgcg cacggcgacc tcgtggacat catcgagaaa
     1261 cccgacgccg cgacgttcgc gcggttcggc gacgacgtcc cggtgagcat gaactgctgg
     1321 cggttcgaca cgtcgatctt cgaggcgtgc gcgcggattc aggcgtcggc gcgcggcgag
     1381 ctcgagctgc cgaacgcggt gcgctacgcc gtccgcacga tggcgctgcg gttccggacc
     1441 attccggtgg cggccggcgt gctcgatctc tccagccgcg aggacatcgc cgaggtcgag
     1501 cgcaggctcg cgcatgtcga tccacgtccc tgacgccggc gatctcgaac cgcgcctcgc
     1561 cgcaggcggc atgcacgggc tgccggcgcg ccaggcggcg gcgcgcttcg cgcacctgct
     1621 gcagcggttc gccggcagcg gttcgcgcga accgtggagc gcgtggttcg tccccggccg
     1681 catcgaggtg ctcggcaagc acaccgacta cgccggcggc cgcagcctga tctgcgccgt
     1741 cgagcgcggg atctgcgcca tcgcggccgc gcggtccgac gatctgttga cggtcaccga
     1801 catcccgcgc gagtcatcga tcgccgtgcg cgccggcgac gcacatgcgg ccgtgaactg
     1861 gggcacgtat ccgctcaccg tccttcgccg cgtcgtccgc aactttcccg ggccgctgcg
     1921 cggcgccgac atcttcatcg acagcgacct gccgtccgcg gcggggctga gcagctcgag
     1981 cgcattgatg atcgccgtgc tgctggcact ggagcgcgtc aacggtctcg acgcgtcacc
     2041 tgcgtggaaa gcgagcatcg cgtcggcggc cgatctcgcc gcctatgcgg cgacgatcga
     2101 gaacggcagc gggttcaagt cgcttgccgg cgagcgcggc gtcggcaccg aaggcggcag
     2161 ccaggatcac accgcgattc tctgcagcgt ccgc
//
LOCUS       DASSYW010001064         4580 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_932668, whole genome shotgun sequence.
ACCESSION   DASSYW010001064 DASSYW010000000
VERSION     DASSYW010001064.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4580)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4580)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4580
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_932668"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(58..207)
                     /locus_tag="VFN38_16840"
     CDS             complement(58..207)
                     /locus_tag="VFN38_16840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013493.1"
                     /translation="MLGLAITLFLIWVLCVLVFKIAAFFVHILLILGVIALVMHFVRG
                     RKTVV"
     gene            complement(241..645)
                     /locus_tag="VFN38_16845"
     CDS             complement(241..645)
                     /locus_tag="VFN38_16845"
                     /inference="COORDINATES: protein motif:HMM:NF024854.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HET9013494.1"
                     /translation="MLARAYSAIADEVETDISRHDLTTTEFGILEALHHKGPLLLGEI
                     QRKVLVTSGGITYLVDRLVDKGLVKREPSPDDRRARYAVLTPEGARLIGRIFPPHAEF
                     LTGIMRALTPDEQTTATTLLRKLGLSAARESE"
     gene            complement(819..2465)
                     /locus_tag="VFN38_16850"
     CDS             complement(819..2465)
                     /locus_tag="VFN38_16850"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HET9013495.1"
                     /translation="MNDEFYQELPGLRNQYESDALLRAFLRWRVPAATLDAIQPGLVR
                     LGHRAATDLLALGDAAEAHPPRHVPYDPSGRRVDRIEVSDAWRALDAISAEEGLVATA
                     YERAHGPLSRVHQMARLYLFHASSATYSCPLAMTDGAARFLELYGDERTRDAFDRLVS
                     RDPARVWTSGQWMTERTGGSDVSTTTTIARPADDGTYRLHGTKWFTSATTSPMAITLA
                     RIEGAPEGSRGLSVFMVQLRDEVGELRGIRVNRLKDKLGTRALPTAELTLDGTPALLV
                     GEAGDGVRKIATLFNVTRVYNAVAAVSGMRRALALAHGYASMRRAFGKRLADHPLHAE
                     TLAELDAVFHASFHLTFHVVELLGREETGEASEAELAMLRLLTPVAKLFTAKQAVVVA
                     SEALESFGGAGYVEDTGLPRLLRDAQVLPIWEGTTNVLSLDVWRAIERTDALTPWLAH
                     VRDEMTNVRQPECAIAAFAVRAAVNVIEAYVRSTTDPLARQTGARGFAFAIARTAAAA
                     RLVAHAEWACAHDDDREDALARMTRWLGRDLVPGLDVVVA"
     gene            complement(2554..3831)
                     /locus_tag="VFN38_16855"
     CDS             complement(2554..3831)
                     /locus_tag="VFN38_16855"
                     /inference="COORDINATES: protein motif:HMM:NF016648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FecR domain-containing protein"
                     /protein_id="HET9013496.1"
                     /translation="MSTPVSPSDGGAPIPLPLRTPLTDEAALHEAFVAEYPTLAAEAR
                     AELGAEAAVLSPKVVEGAFVRAWDARAKFQTPAELHKFLIDDVHHAAARALSRRAAAH
                     RFAGHEASHVKHANHVTDEINMEQSWAHVLHALHGEAHSPQALAEAAALSRHEAAEHI
                     AVIEKSVPVWKIAGVIVLVAGVLFGAVALMNRLGADAKIASAVNASDARVVPSLPAQI
                     GVVTLDDGSVVRLAPESKLSIPTGFGPDLRAVKLEGAGTFQVAPGQKTNFRVHTRNAV
                     IIAKGTKFTVRNYEGDSATTVVVQEGSVDVRVGDATQSLTAGGSAIAIAGAAPRAATP
                     AESDEAAGWTAGTLAVSNRPLRDVLPLMRRWYGLTVSVPQDTLLTRSVTMRASLDSSR
                     QAIRGIEQSTGLEFGYIGQNMVFRERAAKGAKK"
     gene            complement(3964..>4580)
                     /locus_tag="VFN38_16860"
     CDS             complement(3964..>4580)
                     /locus_tag="VFN38_16860"
                     /inference="COORDINATES: protein motif:HMM:NF012961.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycoside hydrolase family 9 protein"
                     /protein_id="HET9013497.1"
                     /translation="DTARHYQWFPWHNNGHYESWRVARARGDLAARRRMTAHYRRGLT
                     AVVGRADNGFRIGVPFIWCSNNLMTSFATQAYLYRRMTGDQRFRGYEQAAVDWLLGAN
                     PWGVSMVIGYPHDGVTARDPHSAVSARLGVDKLLGGLLDGPVYRSIYGSLKGIALHEP
                     DEYARFNGGRMVYHDDLGDYSTNEPIMDGTASLAYLLAAMADRP"
BASE COUNT          661 a         1515 c         1721 g          683 t
ORIGIN      
        1 gtgaaaaagg ccggaggcgt cgaggatcga cggctccggc cctttttcac accgccgtca
       61 gacgaccgtc tttcgtccgc gcacgaagtg catcacgagc gcgatcacgc ccaggatgag
      121 caggatgtgc acgaagaagg cggcgatctt gaagacgagc acgcacagca cccagatgag
      181 gaacagcgtg atggcgaggc cgagcatcga tgtctcccgt gcggagttga gaatggagag
      241 ctactcgctc tcgcgggcgg ccgacaggcc gagcttgcgg agcagcgtcg ttgccgtggt
      301 ctgctcgtcg ggcgtcaatg cacgcatgat gcccgtgaga aactcggcgt gcggcgggaa
      361 gatccgaccg atcagccgcg cgccctccgg cgtgagcacg gcgtagcgcg cgcgccgatc
      421 atcgggggac ggttcgcgct tcacgagccc cttgtcgacg agacgatcca ccaggtaggt
      481 gatgcctccg ctcgtgacga gcacctttcg ctggatctcg ccgagcagga ggggtccctt
      541 gtggtgcagc gcctcgagga tgccgaactc cgtcgtggtg aggtcgtggc gcgagatgtc
      601 ggtctccact tcgtcggcga tggccgagta ggcgcgtgcc agcacgaccc acagcttgag
      661 cgcgcgggcg gttgcggcgt cccggcgagg cgcgcgggag tgttcgtcgg tcgagcgggc
      721 tggggacatg agcaggtcgg aggaacgagc gggcgacgcc gaatcgtacg ggcccgccga
      781 gcgcgcagcc agtggcgccg tgtcgaacgg cctgtcggtc aggcgaccac gacgtcgagc
      841 cccggcacga gatcgcgccc gagccatctc gtcatgcgcg ccagcgcgtc ctcgcggtcg
      901 tcgtcgtgcg cgcacgccca ctcggcgtgc gcgacgaggc gggcggccgc cgcggtgcgc
      961 gcgatggcga aggcgaagcc gcgcgcgccc gtctgacgcg cgagcgggtc ggtggtgctc
     1021 cgcacgtacg cctcgatcac gttgaccgcc gcgcggacgg cgaaggcggc gatcgcgcac
     1081 tccggctgcc tgacgttcgt catctcgtcg cgcacgtgcg ccagccatgg cgtcagcgca
     1141 tcggtgcgct cgatggcgcg ccagacgtcg aggctcagca cgttcgtggt gccttcccag
     1201 atgggcagca cctgggcgtc gcgcagcagc cgcggcaggc cggtgtcctc cacgtagccc
     1261 gcgccaccga acgattcgag cgcctcgctg gcgacgacga cggcctgctt cgccgtgaag
     1321 agcttggcga cgggggtgag gaggcgcagc atcgccagct cggcttcgct cgcctcgccg
     1381 gtctcctcgc ggccgagcag ctcgacgacg tggaaggtga ggtggaacga cgcgtgaaag
     1441 acggcgtcga gctcggcgag cgtctcggcg tgcagcggat gatccgcgag ccgcttgccg
     1501 aaggcgcggc gcatggaggc gtatccgtgc gcgagcgcga gggcgcggcg catgccggag
     1561 acggcggcga ccgcgttgta gacgcgcgtg acgttgaaca gcgtggcgat cttgcggact
     1621 ccgtcgcccg cctcgccaac gaggagcgcg ggggtgccgt cgagcgtcag ctcggcggtg
     1681 gggagggcgc gggtgcccag cttgtccttg aggcggttga cgcgaatgcc gcggagctcg
     1741 cccacctcgt cgcggagctg caccatgaac acgctcaggc cgcggctgcc ctccggcgcg
     1801 ccctcgatgc gcgcgagggt gatcgccatc ggcgacgtcg tcgcggacgt gaaccacttc
     1861 gtgccgtgca ggcgataggt gccgtcgtcc gccggacgcg cgatggtcgt ggtggtggag
     1921 acgtcggacc cgccggtgcg ctcggtcatc cattgtcccg aggtccacac gcgggcggga
     1981 tcgcgcgaga cgaggcggtc gaatgcgtcg cgcgtgcgct cgtcgccgta cagctcgagg
     2041 aaacgggccg cgccatcggt catcgcgagc gggcagctgt acgtcgcgga cgacgcatga
     2101 aagaggtaga ggcgcgccat ctgatgcacg cgcgagagcg gcccgtgcgc gcgctcgtag
     2161 gccgtggcga cgagcccctc ttccgccgag atggcgtcga gcgcgcgcca ggcatcgctg
     2221 acctcgatgc ggtcgacgcg cctgcccgac ggatcgtacg ggacgtggcg cggcgggtgg
     2281 gcctcggcgg cgtcgcccag ggccaggaga tcggtggcgg cccgatgtcc gaggcgcacg
     2341 aggccgggct ggatggcgtc gagcgtggcg gcgggcacgc gccatcggag gaacgcgcgc
     2401 agcagcgcat cgctctcgta ctggttgcgc agcccgggca gttcctggta gaactcgtcg
     2461 ttcatgcgtg cctcacgtac cgggacgagc gagccccccg ccgcgttgcg gcgaggggct
     2521 cgctccgggc tcgtcgcccg ggccgcgtcg cgcctacttc ttcgcgccct tggccgcccg
     2581 ttcgcggaag accatgttct gcccgatgta gccgaactcg agcccagtgc tctgctcgat
     2641 gccgcggatg gcctgccgcg acgaatcgag cgacgcccgc atcgtgaccg atcgcgtgag
     2701 cagcgtgtcc tgcggcacgc tcaccgtgag cccgtaccac ctccgcatga ggggcagcac
     2761 gtcgcggagg ggacgattgc tgacggcgag ggtgccggcg gtccagccgg ccgcttcatc
     2821 cgactcggcc ggcgtggcgg cgcggggcgc cgcaccggcg atggcgatcg cggagcctcc
     2881 ggcggtgagg gactgtgtcg cgtcaccgac ccgtacgtcg accgagccct cctgcaccac
     2941 cacggtcgtg gcggaatcgc cctcgtagtt gcgcacggtg aacttcgtcc ccttggcgat
     3001 gatgacggcg ttccgcgtgt gcacgcggaa gttcgtcttc tgcccgggcg ccacctggaa
     3061 ggtgccggcc ccttcgagct tcacggcgcg gaggtccggc ccgaacccgg tggggatgga
     3121 cagcttcgat tcgggcgcca ggcgcacgac gctgccgtcg tcgagcgtga cgacgccgat
     3181 ctgcgccggc agcgacggga cgacgcgggc gtcggaggcg ttgacggccg aggcgatctt
     3241 ggcgtccgcg ccgaggcggt tcatgagggc aacggcgccg aacagcaccc cggcgacgag
     3301 gacgatcacg ccggcgatct tccagaccgg gacgctcttc tcgatgacgg cgatgtgctc
     3361 cgcggcttcg tgccgggaaa gcgcggccgc ctcggccagc gcctgggggc tgtgggcctc
     3421 gccgtgcagc gcgtggagca cgtgcgccca cgactgctcc atgttgatct cgtcggtcac
     3481 gtggttggcg tgcttcacgt gcgacgcttc gtggccggcg aatcggtggg cggcggcacg
     3541 gcggctgagg gcgcgggccg cggcgtgatg cacgtcgtcg atcaggaact tgtgcagctc
     3601 ggcgggcgtc tggaatttcg cgcgcgcatc ccaggccctg acgaacgccc cttccacgac
     3661 cttggggctg aggacggccg cctcggcgcc cagctccgcg cgggcctccg cggcgagggt
     3721 cggatactcc gccacgaagg cctcgtggag cgcggcttcg tcagtgagcg gagtgcgaag
     3781 cgggagcggg atgggcgcgc cgccgtcgct gggtgacacg ggtgtggaca tggaagcctc
     3841 tcagtcgtgc gtgaagggtc gactggatcg cttgccggtt gatgctggcc cttggagcat
     3901 acggcggatc ggcgcggagc gccatccggg gaagcccgga cacggccgag gacggttccc
     3961 ccgtcacggg cgatcggcca ttgccgccag gaggtaggcc aggctggccg tgccatccat
     4021 gatcggctcg ttggtcgaat agtcgcccag gtcgtcgtga tagaccatcc ggccgccgtt
     4081 gaagcgggcg tattcgtccg gctcgtgcag cgcgatcccc ttgaggctgc cgtagatgga
     4141 gcgatacacc ggtccgtcga gcaggccgcc cagcagcttg tccactccca gccgcgcgga
     4201 aacggcggag tggggatcgc gcgccgtcac gccgtcgtgc ggatagccga tgaccatcga
     4261 cacaccccac gggttcgcgc cgaggagcca gtcgaccgcc gcctgctcgt aaccgcggaa
     4321 gcgctgatcg ccggtcatgc ggcggtagag atacgcctgg gtggcgaacg acgtcatcag
     4381 gttgttcgag caccagatga agggaacgcc gatccggaat ccgttgtccg cccgcccgac
     4441 gacggcggtc aaccctcggc gatagtgggc ggtcatgcgg cgccgcgcgg cgaggtcgcc
     4501 acgggcgcgc gcgacgcgcc acgactcata gtgtccgttg ttgtgccagg gaaaccactg
     4561 gtagtgccgc gcggtgtcgg
//
LOCUS       DASSYW010001065         3052 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1632550, whole genome shotgun sequence.
ACCESSION   DASSYW010001065 DASSYW010000000
VERSION     DASSYW010001065.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3052)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3052)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3052
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1632550"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1743
                     /locus_tag="VFN38_16865"
     CDS             <1..1743
                     /locus_tag="VFN38_16865"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HET9013498.1"
                     /translation="SKWADPEVEHAVNDGGEHMAEQRKHANPIRRVAFAFNDRFERLA
                     DHYPRWLDWALGHRLIVLATAAATIILSFVIIPRLGFTWMPDVNGDEFTVSYRTPPGS
                     RLEYTLDKGRDIATFLMKQPETDFTYLTVGGGFRGTPNQGSIFVALRHGHQRSLAEIQ
                     TDLRGKLRGIAGVRPTIQGQRTIFGGFRQPIIVNVQGPEASRLKLAAARTLEAIKSVP
                     GVAEPNSSEDGDIPQLDVRVDRQEAWRAGLGVGSVASTLQPLFSGQRATTWEDPQGFS
                     HDVVVIFPDSLRSSAENVSSLPVASTFIDARSGLPSMVPLSQVAEVRAGVGPQQIERR
                     MLEQQVQLATGVLPGYAMGDVAKAVQKAIETIGLPPGYHAVFTGDVQNLEETKGYVMS
                     ALILAVVFIYLILASLFGSFLQPLAIMIALPLSFIGVALALLLTRGNMNVMTMIGIIM
                     LMGLVTKNGILLVDFTNQLRAEGRQRADALLGAGRIRLRPIIMTTVAMIFGMMPLALA
                     IGAGAEARAPMARAVIGGLITSTLLTLFVVPVMYTFLDDLGSWASAKLTGAPHGVPAT
                     GGAGPAMPEPATGD"
     gene            1994..2731
                     /locus_tag="VFN38_16870"
     CDS             1994..2731
                     /locus_tag="VFN38_16870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013499.1"
                     /translation="MPRGDELNESLRFSDRDDDGDDLGYGGGGGGSASYDDDDEEDGG
                     WTTHKDDSDDLWDSTDDSDDEEEEGLGTPVVEGDEEDEESPLVVARAPRSGGSGRPVS
                     GGAGAGAGGAGRPATGGAPGTGAVTPSKHPAISDPGNRSSVNRGSAFGGGAAGASGGG
                     MAGGRSGGMGASKSGSGGGAKKSSGAKKTSAKKAPAKKGAAKKSAAKKGGAKKSAMKK
                     SPAKKSSMKKSSAKKGAKKSAKRGGRR"
     gene            2830..>3052
                     /locus_tag="VFN38_16875"
     CDS             2830..>3052
                     /locus_tag="VFN38_16875"
                     /inference="COORDINATES: protein motif:HMM:NF024586.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HET9013500.1"
                     /translation="MKSPPLERRVLDALPITIYAVDLDGRLTFLNRSWARFAQSNGAP
                     ELCDERAVLGSSIWDAIPDGAVRAQVEQAL"
BASE COUNT          479 a         1054 c         1072 g          447 t
ORIGIN      
        1 agcaagtggg ccgaccccga ggtggagcac gccgtgaacg acggcgggga gcacatggcc
       61 gagcagcgga agcacgccaa cccgatccgc cgcgtcgcct tcgccttcaa cgaccggttc
      121 gagcggctcg ccgaccacta cccgcgctgg ctcgactggg cactggggca ccgcctgatc
      181 gtgctcgcca ccgcggcggc caccatcatc ctcagcttcg tcatcatccc gcgcctgggc
      241 ttcacctgga tgcccgacgt gaacggcgac gagttcacgg tgagctaccg caccccgccg
      301 ggatcgcggc tcgagtacac gctcgacaag gggcgggaca tcgcgacctt cctgatgaag
      361 cagccggaga ccgacttcac ctatctcacg gtgggcggcg gcttccgggg caccccgaac
      421 cagggcagca tcttcgtcgc gctccggcac ggccatcagc gctccctggc cgagatccag
      481 acggacctgc gcggcaagct gcgcggcatc gccggcgtgc ggcccaccat ccagggccag
      541 cgcacgatct tcggcggctt ccggcagccg atcatcgtga acgtgcaggg cccggaggcg
      601 tcccggctca agctcgccgc ggcccgcacg ctcgaggcca tcaagtcggt gccgggggtg
      661 gccgagccca actcgagcga ggacggagac atcccgcagc tcgacgtccg cgtcgaccgc
      721 caggaggcct ggcgcgccgg tctcggcgtg ggcagcgtcg cctccaccct ccagcccctg
      781 ttcagcggcc agcgcgccac cacctgggag gacccgcagg gcttctcgca cgacgtcgtc
      841 gtcatcttcc ccgactcgct ccgcagctcg gcggagaacg tttcgtcgct gccggtggcc
      901 agcaccttca tcgacgccag gagcggtctc ccctcgatgg tgcccctctc gcaggtggcg
      961 gaggtgcggg cgggggtcgg accccagcag atcgagcgcc ggatgctcga gcagcaggtg
     1021 cagctcgcca ccggcgtcct gcccggctac gccatgggcg acgtggccaa ggcggtgcag
     1081 aaggccatcg agacgatcgg tctccctccc ggctatcacg ccgtgttcac cggcgacgtg
     1141 cagaacctcg aggagacgaa gggttacgtg atgagcgccc tgatcctcgc cgtggtgttc
     1201 atctacctga tcctcgcctc gctgttcggg tcctttctcc agccgctggc gatcatgatc
     1261 gctctcccgc tgagcttcat cggcgtggcg ctcgccctgc tgctcacccg cggcaacatg
     1321 aacgtgatga cgatgatcgg catcatcatg ctcatggggc tggtgaccaa gaacggcatc
     1381 ctgctcgtcg acttcaccaa tcagctgcgc gccgaaggac gccagcgcgc cgacgcgctg
     1441 ctcggtgcgg ggcggatccg gctgcgcccg atcatcatga ccaccgtcgc gatgatcttc
     1501 ggcatgatgc cgctggcgct cgccatcggc gcaggcgcag aggcgcgggc gcccatggcg
     1561 cgcgccgtga tcggtgggct catcacctcc acgctcctca ccctgttcgt ggtgccggtg
     1621 atgtacacct tcctggatga cctggggagt tgggcgagcg cgaagctcac cggcgcgccg
     1681 cacggtgtgc cggcgaccgg cggtgcgggc cccgcgatgc cggagcccgc gacgggcgac
     1741 tgaggagacg ccgtacgcgg tgattgcagt cacggtgcgc ggattctgct tgacggatta
     1801 tgcgcattgc cttacaagct cactgtgtgc gagcggtccg catttgtgcg cggtgtccgc
     1861 cgctgcaacg gcgagtgcgc gccgcgcgtc agcgaggcgg tcgggcacac gtcgtgcagc
     1921 ggccgcgcgc ggaccgcgcc gcgacttcag atggcacgca ggtccgactg tcctatctct
     1981 tcaggaggcg gtaatgccgc gcggtgacga gttgaacgaa tcccttcgat tttcagatcg
     2041 cgatgacgac ggcgacgatc ttggttacgg aggtggcggg ggtggatcgg cctcgtacga
     2101 tgacgacgac gaggaggacg gcggctggac gacccacaag gacgacagcg acgacctctg
     2161 ggacagcacc gacgactccg atgacgagga ggaggagggg ctcggcacgc ccgtcgttga
     2221 aggcgacgag gaagacgagg agagcccgct cgtcgtggcg cgcgcgcccc gctcgggtgg
     2281 cagcggccgg ccggtatcgg ggggcgctgg ggcgggagcc ggtggcgcgg gacggccggc
     2341 cacaggtggc gcgcccggca ccggcgccgt gacgccatcc aagcatccgg ccatcagtga
     2401 tccggggaac cgctcgtcgg tgaaccgcgg ctccgcgttc ggcggcggcg cggcgggggc
     2461 cagcggcggt ggcatggccg gcggtcgctc cggtggcatg ggcgcgtcca agagcgggtc
     2521 gggcggaggt gccaagaaga gctcgggcgc caagaagacc tcggccaaga aggcgccggc
     2581 caagaagggc gcggccaaga agagcgcggc caagaagggc ggtgcgaaga agtcggcgat
     2641 gaagaagtcg ccggcgaaga agtcctccat gaagaagtcc tccgccaaga agggcgcgaa
     2701 gaagagcgcc aagcgcggcg gtcgccggta gcttcccgcc gtcgactcga tgacacgacg
     2761 gggcgcggcg atcgccgcgc cccgtcgtgt ttgcttccgt ccttcgccac gccgctctaa
     2821 tatcccggca tgaagtcccc ccctctcgag cgccgggtgc tcgacgccct cccgatcacc
     2881 atctacgcgg tggatctcga cgggcgcctc actttcctga atcgctcatg ggcgcgcttc
     2941 gcgcagtcca acggcgcgcc cgagctgtgc gatgaacgcg cggtgctcgg ctcctccatc
     3001 tgggacgcca tccccgacgg cgccgtgcgc gcgcaggtcg agcaggcgct gg
//
LOCUS       DASSYW010001066         3147 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_435022, whole genome shotgun sequence.
ACCESSION   DASSYW010001066 DASSYW010000000
VERSION     DASSYW010001066.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3147)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3147)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3147
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_435022"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..972)
                     /locus_tag="VFN38_16880"
     CDS             complement(<1..972)
                     /locus_tag="VFN38_16880"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HET9013501.1"
                     /translation="MRTGVIGAGGLGQHHIRILRDLQGPDFAGFFESRPERAAKVAEE
                     LGVRAFGTLESLLDEVDAVTIVVPTPAHFAVARQVLSRGIHALIEKPIAVTLEEADEM
                     LALARRHGALVQTGHVERFNRAIRAALPYVDAPRFIQSDRLAPFNPRGADVAVVLDLM
                     IHDIDLVLTLVGGKASSVQAVGVPVLTPFTDIANARLTFDSGAVANITASRVSRERMR
                     KLRIFQQSGYLSLDLGAGNGEFFRLRGDVDVAALATAPLALEQFVERIPLEADEGDAL
                     RLEFESFLAGVRGEAPIPVTGEAGRDALTVALQIVTDIERARQALAGA"
     gene            complement(981..1757)
                     /gene="lpxA"
                     /locus_tag="VFN38_16885"
     CDS             complement(981..1757)
                     /gene="lpxA"
                     /locus_tag="VFN38_16885"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008780 -
                     acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine
                     O-acyltransferase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HET9013502.1"
                     /translation="MSPRIHATAIVSPDARIADDVEIGAFAMVGEGCTIGAGSVIAPR
                     ATLERNVILGANVKVGIGSVLGGDPQDLKFKGEHTTVEIGDGTTIREYTTINRGTTHS
                     YKTTVGKHCFIMSYVHLAHDCHVGDGVILVNSVQLAGHVTVGDKAIIAGASAAHQFVK
                     IGQYSFVGGCSRISQDVPPYVKAVGNPIKLYGLNSVGLQRNNFPEDVVRELKRAYRIF
                     FRSELNVTQAKERAATELKPLPEVQELLRFVEDSGRGVVV"
     gene            complement(1754..3019)
                     /gene="lpxC"
                     /locus_tag="VFN38_16890"
     CDS             complement(1754..3019)
                     /gene="lpxC"
                     /locus_tag="VFN38_16890"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: protein motif:HMM:TIGR00325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008759 - UDP-3-O-[3-hydroxymyristoyl]
                     N-acetylglucosamine deacetylase activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HET9013503.1"
                     /translation="MRKTVARVAEVAGVGLHLGVPCTLAFRPAPSGSGLVFQRRDHAG
                     AAPIPARAEHAVLTERRTQLGEEPNAVHTVEHVLAAVHALGLDDLVISMDGPEPPIMD
                     GSAGPFFEALQQAGVLEQPGCVQVGRLTAPVRLVDGESVYEAVAADQLELDVTIDFPH
                     PLIGRQRYSSPVTSEGFARELSWARTFGFVREVEPLRARGLIKGASTQNAVVLDDAGV
                     VENALRSPDEFVRHKMMDCVGDLALAGVRLKARIVAHKPSHRGTGLFVRALQASMKQE
                     TQVLGIEEIMKVLPHRYPFLLIDRVVEIEPNKRIVGIKNVTINEPFFQGHFPGHPIMP
                     GVLIVEAMAQVGGMLLMGTVPDPGSKVVYFTSLNNVKWRRPVKPGDQIRFELDLLQVR
                     GMMCKMTGVAKVDGEVVCEAEMGAMVRDK"
BASE COUNT          470 a         1164 c         1048 g          465 t
ORIGIN      
        1 ggcgcccgcc agcgcctgac gggcgcgctc gatgtcggtg acgatctgga gcgccacggt
       61 gagcgcgtcg cgccccgcct cgcccgtcac cgggatcggg gcctccccgc gcacgccggc
      121 caggaagctc tcgaactcga ggcgcagcgc atcgccctcg tccgcctcca gcgggatgcg
      181 ctcgacgaac tgctcgagcg ccaggggcgc cgtggcgagc gcggcgacgt ccacgtcgcc
      241 gcgcagccgg aagaactccc cgttgccggc gccgagatcg agggacaggt agccgctctg
      301 ctggaagatg cggagctttc gcatgcgctc gcgcgacacg cggctcgccg tgatgttcgc
      361 cacggcgccc gaatcgaagg tgaggcgcgc gttggcgatg tcggtgaacg gcgtgaggac
      421 cgggacgccg acggcctgca ccgacgacgc cttccccccg acgagcgtga ggacgaggtc
      481 gatgtcgtgg atcatcagat ccagcaccac cgccacgtcg gcgccgcgcg ggttgaacgg
      541 cgccagccgg tcgctctgga tgaagcgcgg ggcgtccaca taggggagcg cggcgcggat
      601 ggcgcggttg aagcgctcca catgacccgt ctgcaccagg gcgccgtgcc gccgcgcgag
      661 cgcgagcatc tcgtccgcct cctcgagcgt cacggcgatc ggcttctcga tcagcgcatg
      721 gatgccgcgg gagagcacct gcctggcgac ggcgaagtgc gccggcgtgg gcacgacgat
      781 cgtgaccgca tccacctcgt cgagcagcga ctccagcgta ccgaaggcgc gcacgccgag
      841 ctcctcggcc accttggcgg cgcgctccgg ccgggactcg aagaagccgg cgaagtccgg
      901 tccctgcagg tcacgcagga tccggatgtg gtgctgcccc agtccgccgg ccccgatgac
      961 gccggtgcgc acgcgggtcg tcagacgacc accccacggc cgctgtcctc gacgaaccgc
     1021 agcagctcct gcacctcggg cagcggcttc agctccgtcg ccgcgcgctc cttggcctgc
     1081 gtgacgttga gctccgagcg gaagaagatc cgatacgcgc gcttcagctc gcgcaccacg
     1141 tcctcgggaa agttgttccg ctgcagcccc acgctgttga ggccatagag cttgatcggg
     1201 ttccccaccg ccttcacgta cggcggcacg tcctgcgaga tccgcgagca cccgccgacg
     1261 aacgaatatt ggccgatctt cacgaactgg tgcgccgcgc tcgcgccggc gatgatcgcc
     1321 ttgtcgccca ccgtgacgtg cccggcgagc tgcacgctgt tcacgaggat cacgccgtcg
     1381 cccacgtggc agtcgtgcgc caggtggacg taggacatga tgaagcagtg cttccccacc
     1441 gtcgtcttgt acgagtgggt ggtgccgcgg ttgatcgtcg tgtactcgcg gatcgtcgtg
     1501 ccgtcgccga tctcgaccgt cgtgtgctcg cccttgaact tcaggtcctg ggggtcgccg
     1561 ccgagcacgc tgccgatccc gaccttcacg ttggcgccga ggatcacgtt gcgctccagg
     1621 gtggcccggg gcgcgatcac cgagccggcg ccgatggtgc agccctcgcc gaccatcgcg
     1681 aacgcgccga tctcgacgtc gtcggcgatc cgcgcgtcgg ggctgacgat ggccgtcgcg
     1741 tggatgcgcg ggctcacttg tcgcgcacca tcgcgcccat ctccgcctcg cacaccacct
     1801 cgccgtccac cttggccacc ccggtcatct tgcacatcat cccgcgcacc tgcagcaggt
     1861 ccagctcgaa gcggatctgg tcgcccggct tcacgggccg gcgccacttc acgttgttca
     1921 gcgacgtgaa gtacaccacc ttgctgccgg gatcgggcac cgtccccatg agcagcatcc
     1981 cgcccacctg cgccatcgcc tcgacgatca gcacgcccgg catgatcgga tgtcccggga
     2041 agtggccctg gaagaacggc tcgttgatcg tgacgttctt gatccccacg atccgcttgt
     2101 tcggctcgat ctcgacgacg cggtcgatga ggaggaacgg atagcggtgt ggcaggacct
     2161 tcatgatttc ttcgataccg agcacctggg tctcctgctt catcgacgcc tgcagcgcgc
     2221 gcacgaacaa cccggtgccg cgatgacttg gtttgtgcgc gacgatgcgg gccttcagcc
     2281 gcacaccggc gagcgcgaga tcgcctacac agtccatcat cttatgacgc acgaactcgt
     2341 ccggcgagcg gagggcgttc tccaccacgc cggcgtcgtc cagcacgacg gcgttctgcg
     2401 tcgaggcgcc cttgatcagg ccgcgggcgc gcaacggctc cacctcccgc acgaagccga
     2461 acgtgcgggc ccacgacagc tcacgagcga agccctcgct cgtcacgggg gacgagtacc
     2521 gctgccgccc gatgagcggg tgcggaaaat cgatcgtcac gtcgagctcg agctggtcgg
     2581 cggccaccgc ctcgtacacc gactccccgt ccaccagccg gaccggggcg gtgagccgcc
     2641 ccacctgcac gcagcccggc tgctcgagca cccccgcctg ctgcagcgcc tcgaagaagg
     2701 gaccggcgct cccgtccatt atcggcggct ccgggccgtc catggagatg accagatcgt
     2761 ccagccccag cgcgtgcacc gcggcgagca cgtgctccac cgtgtgcacg gcgttcggct
     2821 cctcgcccag ctgggtgcgg cgctcggtaa gcacggcgtg ctcggcgcgc gctgggatgg
     2881 gcgccgcgcc cgcatggtcg cgccgctgaa acaccagccc gctccccgac ggcgccggcc
     2941 ggaacgcgag cgtgcagggg acgccgagat ggaggccgac cccggccacc tcggccacgc
     3001 gcgccacggt ctttcgcatc agcgccggtc ctcgtccgcc ccgggccatt cccccagcag
     3061 ccgctccagg cgccgcagca gcgacggcag ccggaagagc gccgcctgcg cccggagcga
     3121 ctcgcggtgg gggcgcgccg gatagcc
//
LOCUS       DASSYW010001067         3482 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1508023, whole genome shotgun sequence.
ACCESSION   DASSYW010001067 DASSYW010000000
VERSION     DASSYW010001067.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3482)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3482)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3482
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1508023"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(170..1375)
                     /locus_tag="VFN38_16895"
     CDS             complement(170..1375)
                     /locus_tag="VFN38_16895"
                     /inference="COORDINATES: protein motif:HMM:NF022588.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2911 domain-containing protein"
                     /protein_id="HET9013504.1"
                     /translation="MHDATPRFRRAAALALAALAPLAACAPVPVATPSAPVSAAATTT
                     LLVRLGADTIAMEQYTRTPTRMEGVLVQRSPFTTIARYSVDVGAGSVPQRAEYSLRRG
                     DGTTITGQMQSLSVRYSRDSVTFIGHRSSGDTARVAATTGEVLPYLNGSYGLFELALA
                     RLIATRRDTGNFSIVPLSWAAAGSSQLPVKLLAGDSARIGWFGYPLYLRHDGRGGLLW
                     LDGMQTTIKVRVDRVADTPLDTIAKEWSARDLASGAMGRVSSRDTARATIGNAHVWVD
                     YGRPSLRGRNVWVNGVLGDTIWRTGANAATQLRTDADLTIGGAAVPAGIYSLWTRTTP
                     NGYELIINRQAGQWGTEYHPERDLARVPLRESTVTTPVERFTIALDTPGVLVLTWGTK
                     QLSVPISAR"
     gene            1474..2148
                     /locus_tag="VFN38_16900"
     CDS             1474..2148
                     /locus_tag="VFN38_16900"
                     /inference="COORDINATES: protein motif:HMM:TIGR03914.1"
                     /note="This protein belongs to the uracil DNA glycosylase
                     superfamily, members of which act in excision repair of
                     DNA. However, it belongs more specifically to UdgX branch,
                     whose founding member was found to bind uracil in DNA
                     (where it does not belong), without cleaving it, appears
                     to promote DNA repair by a pathway involving RecA, rather
                     than base excision; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UdgX family uracil-DNA binding protein"
                     /protein_id="HET9013505.1"
                     /translation="MSPARRAAKRPSTETGSAADFLPARVSLPALRRAAAGCRGCHLW
                     RVGTQTVFGAGARSARVMFVGEQPGDQEDLAGRPFVGPSGRLLDAALERVGLDRGDTY
                     VTNAVKHFKWVPDPGGKRRIHKTPNASEIRACNPWLDAELAVVKPRVVVALGATAAKA
                     LFGRSFRVTAQRGRVVSTPLADAGFATVHPSAVLRTPGEERADAERAFVNDLRKVARW
                     LAQHAG"
     gene            2168..2800
                     /locus_tag="VFN38_16905"
     CDS             2168..2800
                     /locus_tag="VFN38_16905"
                     /inference="COORDINATES: protein motif:HMM:NF012933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase"
                     /protein_id="HET9013506.1"
                     /translation="MAVTHRTAVAHLRRADPVLAKVIARVRKAPPAPRRTGTHYDALV
                     RAIVYQQLSGKAAGTIHRRFRELFPGKRPRAHLVLATSDEALRGAGLSRQKIGYLRDL
                     SARVVDGSLPLAHLGRLSDDAIIEHLIQVKGIGRWTVQMFLMFRLGRPDVLPELDLGI
                     QNAIQRAYGLKSRPKPKDVIALGEKWRPHATTACWYMWRSLENGDGQGDG"
     gene            2818..>3482
                     /locus_tag="VFN38_16910"
     CDS             2818..>3482
                     /locus_tag="VFN38_16910"
                     /inference="COORDINATES: protein motif:HMM:NF015662.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013507.1"
                     /translation="MHRRAVGATVMIAGMLLFLTGGFFRSQVLQHQKYALQAETNRLR
                     ELPLPAPRGVIYDRNHRIIADNVIGYSVSLLAPKEDSLRVALGRLAQAVNMTPGQVDQ
                     ALRRFRRSPGRPAVVIPDASFDVVSVLEEHRTQFPGLIIQSAPRRFYPDGEIVAPFVG
                     YVGEISETELARLKDTADYKAGQQIGKQGLEKEYENVLHGKEGSQFVEIDARGRIVHE
                     TGAR"
BASE COUNT          534 a         1183 c         1279 g          486 t
ORIGIN      
        1 gacggtgacg acgaagccga cccccggaat ggggatgccg agccagccgt cgatcgtggt
       61 gaacacgcgc acgcagacgt agatcgtgag cgcgaacgga gcgagaaaga cgatgccctt
      121 gaagaaatag ttgaacagcc gactcacgac gcgctcccga cgtggcgccc tatcgagcac
      181 tgatcggcac gctgagctgt ttcgtccccc aggtcagcac gagcacaccc ggcgtgtcga
      241 gcgcgatcgt gaagcgctcc accggcgtgg tcacggtgct ctcacgcaac ggcacccgag
      301 ccaggtcgcg ctcggggtga tactcggtgc cccactggcc cgcctgccga ttgatgatca
      361 gctcgtagcc gttcggcgtg gtccgcgtcc agagcgaata gatcccggcc ggcacggcgg
      421 cgccgccgat cgtgaggtcg gcgtcggtgc gcagctgcgt cgccgcattg gcgccggtgc
      481 gccagatggt gtcgccgagg acaccgttca cccagacgtt ccgaccgcgc agcgacgggc
      541 ggccgtagtc cacccacacg tgcgcattgc cgatcgtcgc gcgcgcggtg tcgcgggagg
      601 agacgcgccc catcgcgccg gaggcgagat cgcgcgccga ccactccttc gcgatcgtgt
      661 cgaggggggt gtcggcgacc cggtccacgc gcaccttgat cgtcgtctgc atcccgtcga
      721 gccagagcag gccgccgcga ccgtcgtggc ggagatacag gggatacccg aaccagccga
      781 tgcgggcgga gtcgcccgcg aggagcttca cgggcagctg cgagctcccc gcggcggccc
      841 agctcagcgg cacgatggag aagttcccgg tgtcccgcct cgtggcgatg agccgggcga
      901 gcgcgagctc gaagaggccg tacgacccgt tcaggtaggg gagcacttcg cccgtggtgg
      961 cggcgacgcg cgcggtgtca ccactggagc gatgcccgat gaaggtgacc gaatcgcgcg
     1021 agtagcggac ggagagcgac tgcatctgtc cggtgatcgt ggtgccgtcg ccgcggcgaa
     1081 gcgagtattc cgcgcgctgg ggcacgctgc cggcgcccac gtccacgctg tagcgcgcga
     1141 tcgtggtgaa cggggagcgc tggacgagca cgccttccat gcgcgtgggg gtccgcgtgt
     1201 actgctccat ggcgatcgtg tccgcgccga gtcggacgag gagcgtcgtc gtcgcggcgg
     1261 cgctcaccgg tgcggacggg gtcgcgaccg ggacgggcgc acaggcggcg agcggcgcga
     1321 gggcggccag cgccagcgcg gcggcgcgcc ggaaacgggg ggtggcgtcg tgcatggtat
     1381 cctcgaagga gagcgggtgc atgctcaaat ggtagcgccg atcaccgcgc gccgcagggg
     1441 ccggttggcc cgtcgattgc ccgtcgcccc gacatgtcgc cagcccgccg cgccgcgaag
     1501 cgcccatcca ccgagacggg gagcgccgcc gatttcctgc cggcgcgcgt gagcctcccc
     1561 gcactgcggc gtgcggccgc gggttgccgc ggttgtcacc tgtggcgagt gggcacgcag
     1621 accgtcttcg gcgccggagc gcggtccgca cgggtgatgt tcgtcggcga gcagccgggg
     1681 gaccaggagg acctggcggg ccgacccttc gtcggcccgt cgggccggct gctcgacgca
     1741 gcgctcgagc gcgtcgggct ggatcgcggc gatacgtacg tgaccaacgc ggtgaagcat
     1801 ttcaagtggg tgcccgatcc gggcgggaag cgtcgcatcc acaagacacc gaacgcctcg
     1861 gagatccgcg cgtgcaaccc gtggctcgat gccgagctcg ccgtcgtgaa gcctcgcgtc
     1921 gtcgtcgcgc tcggcgcgac ggcggcgaag gcgttgttcg gccggagctt tcgcgtcacg
     1981 gcgcagcggg gcagggtcgt gtccaccccg ctggccgacg caggattcgc gacggtgcat
     2041 ccgagcgccg tgctgaggac gccaggcgag gagcgagccg acgccgagcg cgcgttcgtg
     2101 aacgacctcc ggaaggtcgc gcggtggctc gcgcaacacg cggggtgagc acgccgtatc
     2161 ttccgtcatg gccgtcactc accgcaccgc cgtcgcgcat ctccgtcgag ccgaccccgt
     2221 gctcgcgaag gtgatcgccc gcgtccgcaa ggcgccaccc gcgccgcggc ggacgggcac
     2281 gcattacgac gccctcgtgc gcgccatcgt ctaccagcag ctgtcgggca aggcggcggg
     2341 caccatccat cggcgctttc gcgagctctt tcccggcaag cggccgcgtg cgcatctcgt
     2401 gctcgccacg agcgacgagg cgctgcgcgg cgcggggctg tcacggcaga agatcggcta
     2461 cctgcgcgac ctgtcggcac gcgtggtcga cgggtcgctg ccgctggcgc acctcggccg
     2521 gctgtccgac gacgcgatca tcgagcacct gatccaggtc aaggggatcg gacgctggac
     2581 cgtgcagatg ttcctgatgt tccggctcgg ccggcccgac gtgctccccg agctcgacct
     2641 cgggatccag aacgcgatcc agcgcgccta cgggttgaag tcgcggccga agccgaagga
     2701 cgtgatcgcg ctcggcgaga agtggcgccc gcacgccacg acggcgtgct ggtacatgtg
     2761 gcggtcgctg gagaacggcg acgggcaggg ggacgggtga gcttccatcc caacgacatg
     2821 catcggcgcg ccgtgggcgc cacggtgatg atcgccggca tgctgctctt cctcaccggg
     2881 ggattctttc gcagccaggt gctacagcac cagaagtacg cgctgcaggc ggagaccaac
     2941 cgcctgcgcg agctgccgct gccggcgccg cgcggcgtga tctacgaccg gaatcacagg
     3001 atcatcgccg acaacgtgat cggctattcg gtctcgctcc tcgcccccaa ggaggactcg
     3061 ctgcgcgtgg cgctcggccg gctcgcgcag gcggtgaaca tgacgccggg ccaggtggac
     3121 caggcgctgc gccgcttccg gcgctcaccc ggtcggcccg ccgtggtgat ccccgacgcg
     3181 tcgttcgacg tcgtgagcgt gctcgaggag catcgcacgc agttccccgg gctgatcatc
     3241 cagagcgcgc cccgccggtt ctatcccgac ggtgagatcg tggcgccctt cgtgggctac
     3301 gtgggcgaga tcagcgagac ggagctcgcc cggctgaaag acaccgccga ctacaaggcc
     3361 ggccagcaga tcggcaagca ggggctggag aaggagtacg agaacgtgct gcacggcaag
     3421 gaggggagcc agttcgtcga gatcgatgca cgcgggcgca tcgtgcacga gaccggcgcg
     3481 cg
//
LOCUS       DASSYW010001068         3102 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_860806, whole genome shotgun sequence.
ACCESSION   DASSYW010001068 DASSYW010000000
VERSION     DASSYW010001068.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3102)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3102)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3102
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_860806"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1113
                     /locus_tag="VFN38_16915"
     CDS             <1..1113
                     /locus_tag="VFN38_16915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HET9013508.1"
                     /translation="VDAFALYQVPPAVLVNVPTGAVRNYYRSRRHGKLFVIDKADAGH
                     ADDLNAALNASRFPYLVTMDVNTRLEPDALPRLMRPFLLGERVAAVAAPLRIGRADAR
                     NGVSGRIPTGLRAAAQAVEALRDAVYARLGWNRIGGRLPTDVGLLVHRRDHLLALDGF
                     RGDTLDPELDLVVRLRAHLRAERLPNSVPLIPDPIAWTLAPNALGTIRRRRAFAHRGL
                     LEQALRRRRRLLPARDGVRRMLAPIHHAAAVSSPAMEALAYVTLAATLVTRGWAHPLV
                     PLILLVLPGYALLLSLWVVALETIVTRRAESWRDVARLAAGAVAEQLWLRQLVMWSRL
                     RATARVLAGAASDRERVPSPVSVDAPVPAADEAQAR"
     gene            1202..2347
                     /gene="tal"
                     /locus_tag="VFN38_16920"
     CDS             1202..2347
                     /gene="tal"
                     /locus_tag="VFN38_16920"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004801 - transaldolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HET9013509.1"
                     /translation="MPDNRLKQLHDAGVSIWLDFIDRTILRNGDLARRIRDDALTGMT
                     SNPTIFEKALAEGTAYDDQLRGAPRGGTAMDLFELVETSDVRDACDIFMPVYEATKGT
                     DGFVSIEVSPSSANDAHATVAEAQRLWAMVDRPNVMIKVPGTAEGAIAVRTLIGAGLN
                     VNITLLFSLDAHRRVIHAYLEGLEDRRTAGKPVAGIASVASFFVSRVDTEIDKRLDAL
                     AGQKSGAEREKVLALRGKAAIANAKLAYALFQEEFSSPRFAALKKDGARAQRPLWAST
                     GVKNPAYRDTVYVEQLVGPDTVNTMPPALIDAFRDHGETRRTVDEDLAGPRQVIADLA
                     AVGIDLDDVTDKLLREGLASFQKSFETLTAGLEKKSGALGREMASTR"
     gene            2377..>3102
                     /locus_tag="VFN38_16925"
     CDS             2377..>3102
                     /locus_tag="VFN38_16925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HET9013510.1"
                     /translation="MSFPRTKIVCTLGPSTANRETLRSLMEAGLNVARLNFSHGTHEQ
                     HAKTVAMVRDTAKELGRPIAILGDLQGPRIRIGDLAEARSVNDGEDVVLVAGEDATGT
                     EFPTTYEHLCDDVKVGDRILVDDGLIELVALEVHAPRVKARVLHGGAIKSHKGMNLPG
                     VAVSAPSITDKDWADVEFAVAHGLEYLALSFVRRAADIAELRERIPKEMLVVAKIEKD
                     SALENIESIVRASDAVMVARGDLG"
BASE COUNT          446 a         1131 c         1098 g          427 t
ORIGIN      
        1 gtcgacgcct tcgcgctgta tcaggtgccg ccggcggtgc tcgtgaacgt ccccaccggg
       61 gccgtccgca actactatcg ctcccgccgc cacggcaagc tgttcgtgat cgacaaggcg
      121 gacgcggggc acgccgacga cctgaacgcg gcgctgaacg cgtcgcgctt cccctacctc
      181 gtcaccatgg acgtgaacac gcggctcgag ccggacgcgc tgccgcgcct gatgcgtccc
      241 ttcctgctgg gcgagcgcgt cgccgcggtc gcggcccccc tgcgcatcgg gcgcgccgac
      301 gcgcggaatg gcgtgagcgg gcgcatcccg accgggctgc gggccgccgc gcaggcggtg
      361 gaagcgctcc gcgacgcggt ctacgcgcgc ctgggctgga accgcatcgg cggccgactg
      421 ccgaccgacg tcggcctgct ggtgcaccgg cgcgatcacc tgctcgcgct cgatggattc
      481 cgcggcgaca cgctggatcc cgagctcgac ctggtggtgc gcctgcgggc gcacctccgc
      541 gcggaacggc tccccaactc ggtgccgctc attcccgatc ccatcgcctg gacgctggcg
      601 ccgaacgcac tgggcacgat ccgtcggcga cgcgccttcg cgcaccgcgg cctgctggaa
      661 caggcgctgc gccgccggcg acgcctgctc ccggcgcgcg acggcgtccg ccgcatgctg
      721 gcgccgatcc atcacgccgc cgcggtgtcc tcaccggcca tggaggcgct ggcgtacgtg
      781 acgctggcgg cgacgctggt cacgcgcggc tgggcccatc cgctcgtgcc gctcatcctg
      841 ctcgtcctgc cgggatacgc cctcctgctc tcgctctggg tcgtcgcgct cgagacgatc
      901 gtcacccgcc gagccgagtc gtggcgcgac gtggcccggc tcgccgccgg cgccgtggcc
      961 gaacagctct ggctccgcca gctcgtcatg tggagccgcc tgcgcgcgac cgcgcgcgtg
     1021 ctcgccggcg cggcgagcga ccgcgagcgt gtgccgtcgc cggtgtccgt ggacgcgccc
     1081 gtcccggcgg ccgacgaggc acaggcacgc tgacgtcggc tgcgagcggg gtgtatcttc
     1141 cgacgagcgg cgcggcacgt cgcgcgcgtg ccgcaccccg tcgccagcga gtgagcgttc
     1201 catgcctgac aaccgcctga agcagctgca cgatgccgga gtgtccatct ggctcgactt
     1261 catcgaccgc acgatcctgc ggaacggcga tctcgcgcgg cgcatccgcg acgacgcgct
     1321 cacggggatg acgtcgaacc cgacgatctt cgagaaggcg ctcgccgagg gcacggcgta
     1381 cgacgaccag ctgcgcggcg ccccgcgcgg cggcacggcc atggacctgt tcgagctcgt
     1441 cgagacctcc gacgtccgcg acgcctgcga catcttcatg ccggtgtacg aggcgaccaa
     1501 gggcaccgac ggcttcgtct cgatcgaggt ctccccctcg tcggccaacg acgcgcacgc
     1561 gacggtggcg gaggcgcagc ggctgtgggc gatggtcgat cgcccgaacg tgatgatcaa
     1621 ggtgccgggc acggccgaag gcgccatcgc ggtgcgcacg ctcatcggtg ccgggctcaa
     1681 cgtcaacatc acgctgttgt tctcgctcga cgcgcaccgc cgggtgattc acgcgtatct
     1741 ggaggggctc gaggatcgcc gcaccgccgg caagccggtc gccggcatcg cgtccgtcgc
     1801 gtcgttcttc gtcagtcgcg tggacaccga gatcgacaag cggctcgacg ccctcgccgg
     1861 gcagaagtcg ggcgccgagc gcgagaaggt gctggcgctc cgcggcaagg cggcgatcgc
     1921 caacgcgaag ctggcctacg cgctcttcca ggaggagttc tcgtcgcccc gcttcgccgc
     1981 gctgaagaag gacggcgcgc gcgcgcagcg gccgctgtgg gcgagcaccg gcgtgaagaa
     2041 ccccgcctat cgcgacacgg tgtacgtgga gcagctcgtc gggcccgaca cggtgaacac
     2101 catgccgccg gcgctcatcg acgccttccg cgatcacggg gagacgcgcc gcacggtgga
     2161 cgaggatctc gccgggccgc gccaggtcat cgccgatctc gccgcggtgg ggatcgacct
     2221 cgacgacgtc accgacaagc tgctgcgcga ggggctcgcc agcttccaga agagcttcga
     2281 gacgctcacc gccggactcg agaagaagag cggcgcgctc ggtcgcgaga tggcgtccac
     2341 ccgttgatcc cgtcccgccc ctccgatcca cgccacgtgt cctttccacg cacgaagatc
     2401 gtctgcacgc tcggcccgtc gaccgcgaac cgggagacgc tgcggagcct catggaggcg
     2461 gggctcaacg tcgcccgcct gaacttctcg cacgggacgc acgagcagca cgcgaagacc
     2521 gtggcgatgg tgcgcgacac ggccaaggag ctcggccggc cgatcgcgat cctcggcgac
     2581 ctgcaggggc cgcgcatccg catcggcgac ctcgccgagg cgcgcagcgt gaacgacggc
     2641 gaggacgtcg tgctcgtcgc cggtgaggat gcgaccggca ccgagttccc gacgacctac
     2701 gagcacctct gcgacgacgt gaaggtgggc gaccgcatcc tcgtcgacga cggcctgatc
     2761 gagctggtgg cgctcgaggt ccacgcgccg cgggtgaagg cgcgcgtgct gcacgggggc
     2821 gcgatcaaga gccacaaggg gatgaacctc cccggcgtgg cggtgagcgc gccgtccatc
     2881 acggacaagg actgggcgga cgtggagttc gccgtggccc acggcctcga gtatctggcg
     2941 ctgagcttcg tgcgtcgcgc cgccgacatc gccgagctgc gcgagcgcat tcccaaggag
     3001 atgctcgtcg tcgccaagat cgagaaggac tcggcgctcg agaacatcga gagcatcgtg
     3061 cgcgcgtcgg acgcggtgat ggtggcgcgc ggcgacctcg gg
//
LOCUS       DASSYW010001069         2822 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_25844, whole genome shotgun sequence.
ACCESSION   DASSYW010001069 DASSYW010000000
VERSION     DASSYW010001069.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2822)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2822)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2822
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_25844"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..410)
                     /locus_tag="VFN38_16930"
     CDS             complement(<1..410)
                     /locus_tag="VFN38_16930"
                     /inference="COORDINATES: protein motif:HMM:NF013741.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CNNM domain-containing protein"
                     /protein_id="HET9013511.1"
                     /translation="MRSQTLLLGLAIALVAALTAGGMAMRSVSRIWLRHWVEQQLRGA
                     SAALVYLERPQRLIIASSAAVALILVLSGALLAMDHPREPRRLAAALAGFAALVVVVG
                     QLLPRALARRFAPAVASALSPLLEAAAVIAAPVVA"
     gene            complement(407..1639)
                     /locus_tag="VFN38_16935"
     CDS             complement(407..1639)
                     /locus_tag="VFN38_16935"
                     /inference="COORDINATES: protein motif:HMM:NF015436.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin family protein"
                     /protein_id="HET9013512.1"
                     /translation="MLIAAGAVLLAALAAGADGALLGGDPEPEPSPPVVGVLRRRERA
                     HRALALARVLAHLVAGAALARALGLQRSDGIRGAAIALLAALLVVIVVEGVSRSLGFA
                     TAPRLAIAFSPLIRALELLLAPVLRLGVALDALFERVMPPPTIEERAEQREEATEQFR
                     QVVAAEADVSRDEEALLHGVFSLGDTAVREVMVPRVDIVGIDHTTRWSEVVDRVRSSE
                     HARFPVYDDTLDNIQGILYAKDLLPFVIDDDEPMHGWQSLVRPASFIPTSKPIDVQLR
                     DFKAARTHIAIVSDEFGGTAGLVTIEDVLEEIVGEIHDEYDDEEPEIEQEDNKRFWVS
                     GRLALDELSELLGQDFVREDLNTVGGLVYETFGRVPRPGEAVKLGSYKMVIERVRRRR
                     IERVYFERVQTPVGSAAI"
     gene            complement(1651..2094)
                     /gene="ybeY"
                     /locus_tag="VFN38_16940"
     CDS             complement(1651..2094)
                     /gene="ybeY"
                     /locus_tag="VFN38_16940"
                     /inference="COORDINATES: protein motif:HMM:TIGR00043.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HET9013513.1"
                     /translation="MTRIVDVTAEGVRVAVSRARVARVAERVLRAEGARHAMLSVAFV
                     TDREIASLNWRHLRHRGPTDVISFGYAPGAKDGPVVGDVYIAPGVARRNAVAHGRGVR
                     EETLRLVVHGVLHVLGYDHPDDESRYASPMWRRQERLLRAALAAA"
     gene            complement(2091..>2822)
                     /locus_tag="VFN38_16945"
     CDS             complement(2091..>2822)
                     /locus_tag="VFN38_16945"
                     /inference="COORDINATES: protein motif:HMM:NF014069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HDIG domain-containing protein"
                     /protein_id="HET9013514.1"
                     /translation="RETHLTLLEWGDLNRPLLQRLSLEAPGTYAHTIAIANLAEAACR
                     AIGANAVLARVGAYYHDIGKLAKPQYFVENQPRGRNVHDKLKPQTSASIIRNHVREGL
                     ELAEAERMPSSIRAFITEHHGTGTIAFFLEKAREREGVVANSGEYNYPGPVPQSVETA
                     VVMLADGAEAATRALAEPTPERIREVIDLVVRQRLEQGQLRDAPLTLRQLTIVKQQFA
                     RVLGGMYHARVDYPTPPLGVEALRR"
BASE COUNT          392 a         1065 c         1006 g          359 t
ORIGIN      
        1 gccaccacgg gcgcggcgat caccgccgcc gcctccagca gcggcgacag cgccgaggcg
       61 acggcggggg cgaaccggcg cgccagcgcg cgcggcagca gctgcccgac gacgacgacg
      121 agggccgcga acccggccag cgccgccgcc agccgccgcg gctcgcgcgg atggtccatg
      181 gccagcagcg cgccgctcag cacgaggatg agcgccacgg cggcgctgga cgcgatgatc
      241 agccgctgcg ggcgctccag atagacgagc gcggcgctcg cgccgcggag ctgctgctcc
      301 acccagtggc gcagccagat gcggctcacc gaacgcatgg ccatgccgcc ggccgtcagc
      361 gccgcgacga gggcgatcgc caggccgagg aggagagtct gcgacctcat atggcggccg
      421 atcccacggg cgtctggacc cgctcgaagt agacgcgctc gatccgccgg cggcgcacgc
      481 gctcgatcac catcttgtac gagccgagct tcaccgcctc gccgggccgc ggcacgcgcc
      541 cgaaggtctc gtagacgagg ccgcccaccg tgttgaggtc ctcgcggacg aagtcctgtc
      601 cgagcagctc ggacagctcg tcgagcgcga ggcggccgct cacccagaag cgcttgttgt
      661 cctcctgctc gatctccggc tcctcgtcgt cgtactcgtc gtggatctcg ccgacgatct
      721 cctcgagcac gtcctcgatg gtcacgaggc ccgccgtgcc gccgaactcg tcgctcacga
      781 tggcgatgtg ggtgcgggcc gccttgaagt cgcgcagctg cacgtcgatc ggcttcgagg
      841 tggggatgaa cgacgccggc cgcacgagcg actgccaccc gtgcatcggc tcgtcgtcgt
      901 cgatcacgaa cggcagcaag tccttcgcgt acaggatccc ctggatgttg tcgagggtgt
      961 cgtcgtacac cgggaagcgc gcgtgctcgg agctgcggac ccggtcgacg acctcgctcc
     1021 agcgggtcgt gtggtcgatg ccgacgatgt ccacgcgcgg caccatcacc tcgcgcacgg
     1081 cggtgtcgcc cagggagaag acgccgtgca gcagcgcctc ctcgtcgcgg gacacgtccg
     1141 cctccgccgc cacgacctgg cggaactgct cggtggcctc ctcgcgctgc tcggcgcgct
     1201 cctcgatcgt cggcggaggc atcacccgct cgaagagcgc gtcgagcgcg acgcccagcc
     1261 ggaggacggg ggccagcagc agctcgagcg cgcggatgag cggggagaag gcgatggcga
     1321 ggcgcggcgc ggtggcgaag ccgagcgagc ggctgacgcc ctccacgacg atcaccacga
     1381 gcagggcggc cagcagcgcg atcgccgcgc cccgaatgcc gtcgctgcgc tggagcccca
     1441 gcgcccgcgc gagcgcggcg ccggccacca ggtgggcgag cacgcgcgcc agcgcgagcg
     1501 cgcggtgcgc ccgctcccgc cggcgcagga cgccgacgac cggcggcgat ggctcgggct
     1561 cggggtcgcc ccccaggagc gcgccgtcgg ccccggccgc gagcgcggcg agcagcacgg
     1621 cgccggccgc gatgagcatc gacgtaccga tcatgccgcc gccagcgccg cgcgcagcag
     1681 gcgctcctgc cggcgccaca tcggcgacgc gtaccgcgac tcgtcgtcgg ggtggtcgta
     1741 gccgagcacg tgcagcaccc cgtgcaccac gagccgcagc gtctcctcgc gcacgccacg
     1801 cccatgcgcc accgcgttgc gacgcgccac gccgggcgcg atgtacacat cgcccaccac
     1861 cggcccgtcc ttcgcgccgg gcgcgtagcc gaacgagatg acgtcggtgg gaccccgatg
     1921 ccgcaggtgc cgccagttga gcgacgcgat ctcgcggtcc gtcacgaacg cgacggagag
     1981 catcgcgtga cgcgcgccct cggcgcgcag cacgcgctcg gccacgcgcg ccacgcgggc
     2041 ccgcgacacc gcgacccgca ccccctcggc cgtcacgtcc acgatgcgcg tcaccgacgg
     2101 agggcctcga cgcccagcgg aggcgtcgga tagtccacgc gcgcgtggta catcccgccc
     2161 agcacgcggg cgaactgctg cttcacgatg gtgagctgtc gcagcgtgag gggcgcgtcg
     2221 cgcagctgcc cctgctccag ccgctgccgc accacgagat cgatgacctc gcggatccgt
     2281 tccggcgtgg gctcggcgag cgcgcgcgtc gccgcctcgg cgccgtcggc cagcatgacg
     2341 accgccgtct cgacgctctg cggcaccggc cccggatagt tgtactcgcc gctgttggcg
     2401 acgacgcctt cccgttcccg cgccttctcg aggaagaagg cgatcgtccc ggtgccgtgg
     2461 tgctcggtga tgaatgcccg gatggagctc ggcatccgct ccgcctcggc gagctcgagg
     2521 ccctcgcgca cgtggttgcg gatgatcgac gcgctggtct gcggcttcag cttgtcgtgc
     2581 acattgcggc cgcgcggctg gttctccacg aagtactgcg gcttggccag cttcccgatg
     2641 tcgtggtagt acgcgcccac ccgcgccagc accgcgttcg ccccgatcgc gcggcaggcc
     2701 gcctcggcca ggttggcgat cgcgatcgtg tgcgcgtagg tgccgggggc ctccaggctg
     2761 aggcgctgga gcaacgggcg gttcaggtcg ccccactcca gcagcgtcag gtgggtctcg
     2821 cg
//
LOCUS       DASSYW010001070         2291 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_398325, whole genome shotgun sequence.
ACCESSION   DASSYW010001070 DASSYW010000000
VERSION     DASSYW010001070.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2291)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2291)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2291
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_398325"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..501
                     /locus_tag="VFN38_16950"
     CDS             <1..501
                     /locus_tag="VFN38_16950"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HET9013515.1"
                     /translation="GGTGSRDLLRSAYPVVHGDALGEEAKRNGLDPALVAGLIRQESS
                     FNPKAVSAAGARGLMQLMPSVGASIAASRGYPMWNQALLLEPDVSLELGTAHLATSLR
                     GGASPARALAAYNAGGSRVARWLQRPGADDPELFTEWIPYTETRDYVRIVQRNAQVYR
                     ALYGLR"
     gene            complement(571..>2291)
                     /locus_tag="VFN38_16955"
     CDS             complement(571..>2291)
                     /locus_tag="VFN38_16955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013516.1"
                     /translation="RYADIQPTWSPDGTTIAFATDRGAQTDFTTMKFSPLQLATIDVA
                     TGRISVFSPFSRGKHINPQYSPDGQSLFFISDQDGFADVYRLQLASGAVSRVTRLSTG
                     VSGITDISPAMSVAPATGRMLFSVFQDQGYGIFGLDAARTRGEPVVLGAAVASAAILP
                     PGDTPGRSTVTQYLQDPLTGLAAGTDFTSLPYHSKFSLDAIGQPSLGVSAGGPLGTGV
                     AGGVSFLFGDQLSDKQIGVAISANGQVQDIGGQVIYQNLKHRWNYFGALQHIPYITGY
                     SAIDQSTNTQYLFLTRIFVDQASLGTSYPFSTTRRMELSASATRLAYSSEVQTYSFGG
                     STSRSLPSPYPTSYYGTGSVAYVGDNSYSAFTNPIQGERYRLELSPTFGSLVYNAALA
                     DYRKYFFMRPLTLAFRGLHYGRYGRDSDDSTRMYPLFLGEETIMRGYGYGSITQDECD
                     ASRASGLPGGCPAFTRLLGSRVGVVSAELRIPVFGVPEYGLFDFPYLPLTISPFFDAG
                     EAWYKTDSPTLDLAQAGGRGVVTSAGVSARVNLLGYAILEFYAARPFQRPTKQWVYGI
                     QLAPGW"
BASE COUNT          350 a          755 c          858 g          328 t
ORIGIN      
        1 ggcgggacgg gttcccgcga cctgctgcgc tcggcgtatc cggtcgtcca cggtgacgcg
       61 ctcggggagg aagcgaagcg gaacgggctc gatcccgcgc tcgtggcggg tctgatccga
      121 caggagtcga gcttcaatcc caaggccgtc tcggcagctg gcgcgcgcgg cctgatgcaa
      181 ttgatgccgt ccgtaggcgc gtcgatcgcg gcgagccgtg gctatccgat gtggaatcag
      241 gcactgctgc tcgagcccga cgtgagcctg gagctcggca cggcgcatct cgcgacgagc
      301 ctgaggggag gcgcgtcgcc cgcgcgggcc ctggcggcgt acaacgccgg cggctcgcgg
      361 gtcgcgcgct ggctccagcg tcccggcgcg gacgacccgg agctgttcac ggagtggatc
      421 ccgtacacgg agacgcgcga ctatgtgcgg atcgtgcagc gcaacgccca ggtgtaccgc
      481 gcgctgtacg ggctccgctg acggcacgag ggcgggggcg cgatcgcgcc cccgccctcg
      541 tacagactac tgacccccag cgacgacgcc ttaccagccg ggcgcgagct ggatgccgta
      601 gacccactgc ttggtgggcc gctggaacgg tcgcgcggca tagaactcca ggatcgcgta
      661 ccccagcagg ttcacgcgcg ccgacacgcc ggcgctggtg acgacgccgc ggccgccggc
      721 ctgcgcgagg tcgagggtcg gcgagtccgt cttgtaccac gcctcgccgg cgtcgaagaa
      781 cggggagatc gtcagcggca ggtaggggaa gtcgaacagc ccgtactccg gcacgccgaa
      841 caccgggatg cggagctccg cgctcaccac ccccacgcgg ctgccgagca ggcgcgtgaa
      901 cgcggggcat ccgcccggga gccccgacgc ccgcgaggcg tcgcactcgt cctgggtgat
      961 ggagccgtag ccgtagccgc gcatgatcgt ctcctcgccc aggaacagcg gatacatccg
     1021 ggtcgagtcg tcgctgtcgc gcccgtagcg cccgtagtgc agcccgcgga aggcgagggt
     1081 gagcggccgc atgaagaagt acttgcggta gtcggcgagc gccgcgttgt agaccagcga
     1141 gccgaaggtg ggcgacagct ccagccggta ccgctcgccc tggatggggt tcgtgaaggc
     1201 cgaatacgag ttgtcgccca cgtacgccac gcttccggtg ccgtagtacg aggtggggta
     1261 gggcgacggg agcgaccggc tggtggagcc gccgaagctg tacgtctgca cctcggagct
     1321 gtaggcgagc cgcgtggccg acgcgctgag ctccatgcgc cgcgtggtcg agaaggggta
     1381 cgacgtgccg aggctggcct ggtcgacgaa gatgcgcgtc aggaagaggt actgcgtgtt
     1441 cgtgctctgg tcgatggccg agtagcccgt gatgtacggg atgtgctgca gcgcgccgaa
     1501 gtagttccag cggtgcttca ggttctggta gatcacctgc ccgccgatgt cctgcacctg
     1561 gccgttcgcc gagatggcga cgccgatctg cttgtcgctc agctggtcgc cgaacaggaa
     1621 cgacacgccg ccggcgaccc ccgtgcccag cggaccgccc gccgacaccc ccagcgacgg
     1681 ctgcccgatg gcgtcgagcg agaacttgga atggtacggc agggaggtga agtccgtgcc
     1741 ggcggccagc ccggtgagcg ggtcctggag gtactgcgtc acggtggaac ggccgggggt
     1801 gtcgccgggc gggaggatgg ccgcgctggc caccgccgcg cccagcacca ccggctcgcc
     1861 gcgcgtgcgc gccgcgtcga gcccgaagat gccgtacccc tggtcctgga acaccgagaa
     1921 cagcatgcgc cccgtcgccg gcgccacgct catcgccggc gagatgtccg tgatgccgct
     1981 gacgccggtg gagaggcggg tcacccgcga caccgcgccg ctggcgagct gcaaccggta
     2041 cacgtcggcg aagccgtcct ggtcgctgat gaagaagagg ctctgcccgt cgggcgagta
     2101 ctgcgggttg atgtgcttcc cgcgcgagaa gggggagaag acgctgatgc gccccgtcgc
     2161 cacgtcgatc gtcgcgagct ggaggggcga gaacttcatc gtcgtgaagt ccgtctgcgc
     2221 gccgcggtcc gtcgcgaagg cgatcgtggt gccgtcgggg gaccaggtgg gctggatgtc
     2281 ggcgtaccgg t
//
LOCUS       DASSYW010001071         2146 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1282757, whole genome shotgun sequence.
ACCESSION   DASSYW010001071 DASSYW010000000
VERSION     DASSYW010001071.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2146)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2146)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2146
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1282757"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..272)
                     /locus_tag="VFN38_16960"
     CDS             complement(<1..272)
                     /locus_tag="VFN38_16960"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HET9013517.1"
                     /translation="MIGAAVAGLAAAGIAAHGTWHRNSVVFGPVLTHLAGDEAVVSIT
                     FDDGPNPRATPRILEVLRRERVHATFFVLGRHAERWPDLVRRAALDG"
     gene            complement(269..1477)
                     /locus_tag="VFN38_16965"
     CDS             complement(269..1477)
                     /locus_tag="VFN38_16965"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HET9013518.1"
                     /translation="MPLLTPPSATTALKRRPALPNLPALPDAHDDRSLRIALVTEYYY
                     PHLGGVCEHVHFFAREARRRGHHVDIITSNIPGAEAQPHVIRLGRSQPVYANGSQARI
                     TIGLGLRKQMRKVLRRGHYDIVHVDSPLTPILPLLAIEESNAPVVGTFHTYFDRSKGY
                     TLLNDFFQRRLDMLEAAICVSHSTTVALERYFSAPWQIIPNGIDTDVFHPSVAAPPVL
                     RKDVPSILFLGRFDPRNGLSTLIDSFRKVKGKRRQAQLVVVGDGPLREHYYKQARGDE
                     DITFVGAVLEGRPSYYAHSSIYACPTTKASFGITLLESMACATPIVCSDILGFRDVVE
                     HGREALMTHCGDTDALADSLVQLLDDEGLRIQLGTTGRYESMKYSWPRVTSQVLDVYH
                     SVLGQGAARR"
     gene            complement(1872..>2146)
                     /locus_tag="VFN38_16970"
     CDS             complement(1872..>2146)
                     /locus_tag="VFN38_16970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HET9013519.1"
                     /translation="VHMRVSSAPVTGPCYYGIDTPSREELIAANNTLEEIRTSLGVDS
                     LGYLSLEGMLESVPGGPKGFCHACFSGDYPTPPPTDPDKLRYGCGC"
BASE COUNT          343 a          698 c          773 g          332 t
ORIGIN      
        1 ccgtcgagcg ccgcgcgccg cacgaggtcc ggccagcgct cggcgtgccg cccgaggacg
       61 aagaaggtgg cgtgcacgcg ctcccggcgc agcacctcga ggatgcgcgg cgtcgcgcgc
      121 gggttgggcc cgtcgtcgaa cgtgatgctc accaccgcct cgtcgccggc gaggtgggtg
      181 agcacgggcc cgaagacgac gctgtttcgg tgccacgtgc cgtgcgccgc gatccccgca
      241 gctgcgaggc cggcgacggc cgcgccgatc atcgtcgcgc cgcgccctgc ccgagcacgg
      301 agtgatagac gtcgagcacc tgcgacgtca cgcgcggcca gctgtacttc atcgactcgt
      361 agcggcccgt ggtgccgagc tggatgcgca ggccctcgtc gtcgagcagc tgcacgagcg
      421 aatccgccag cgcgtcggta tcgccgcaat gtgtcatcaa cgcctcgcgc ccatgctcca
      481 ccacgtcgcg gaagccgagg atgtccgagc acacgatggg cgtggcacac gccatcgatt
      541 cgagcagcgt gatgccgaac gacgccttgg tggtggggca ggcgtagatc gagctgtgcg
      601 cgtagtagct cggtcgccct tcgagcacgg cgccgacgaa cgtgatgtcc tcgtcgccgc
      661 gcgcctgctt gtagtagtgc tcgcgcagcg gcccatcgcc gacgaccacg agctgtgcct
      721 ggcggcgctt ccccttcacc ttgcggaacg agtcgatcag cgtgctcaac ccgttgcgcg
      781 gatcgaaccg gccgaggaag aggatcgacg gcacgtcctt gcggagaacc ggcggcgcgg
      841 cgacgctcgg atggaatacg tcggtgtcga tgccgttcgg aatgatctgc cagggcgcgc
      901 tgaaatagcg ctcgagcgcc accgtggtgg aatgcgacac gcagatcgcc gcttcgagca
      961 tgtcgaggcg gcgctggaag aagtcgttga ggagcgtgta ccccttcgac cggtcgaagt
     1021 aggtgtggaa ggtcccgacg accggcgcat tggattcctc gatcgccagc agcgggagga
     1081 tcggcgtgag cggcgagtct acgtgcacga tgtcgtagtg cccgcgacgc agcacctttc
     1141 gcatctgctt gcgcagcccc aggccgatcg tgatgcgcgc ctgcgacccg ttggcgtaga
     1201 ccggctggct ccgtcccaga cggatgacgt ggggctgtgc ctccgccccc gggatgttcg
     1261 acgtgatgat gtcgacgtga tgtccacgtc gcctggcttc acgcgcgaag aagtggacgt
     1321 gctcgcagac cccgccgagg tgcggatagt agtactcggt caccagcgcg atgcgcaggc
     1381 tccggtcgtc gtgcgcatcc ggaagcgcgg ggaggttcgg aagcgccggt cggcgcttga
     1441 gcgcagtggt agcggacggt ggggtcaaga gcggcatggg cggctggtcg gtcgagcgac
     1501 acgcgacact ggagcacgaa acgtcatcga gcccactcgc atgaagggaa tctcacgctc
     1561 ctgggctcct tttccgtgct cgccgcggga tcgatcccga tccgcgggcg cacgcttctg
     1621 cctgccgtgg cggccaccgt aataagcctc ccgtccggga accggtcaag gcgtcggaca
     1681 gcagtggtga ggcggacgtc gctcggcaat tcgcaggccc gagcgacgcg acagacgtcg
     1741 tcacgacggg gaggtacacg aattcgtttc agcgcgcgcg gccgtggagg ggacacgatg
     1801 gctgacggat acccgcgcgg aggcgggaag gtccgcgcgg cgcgcccggc cggccgatca
     1861 gcgcgccgcc gtcagcagcc gcacccgtag cgcagcttgt ccgggtccgt ggggggcggg
     1921 gtagggtagt cgccggaaaa acatgcatgg cagaagccct tcggcccgcc cggcacggat
     1981 tcgagcatcc cttccagcga gagatatccg agcgaatcga cgccgagcga ggtccggatc
     2041 tcctcgagcg tgttgttcgc ggcgatcagc tcctcgcggc tgggcgtgtc gatgccgtag
     2101 tagcacggcc cggtcacggg ggccgagctg acgcgcatgt gcacct
//
LOCUS       DASSYW010001072         2452 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1800632, whole genome shotgun sequence.
ACCESSION   DASSYW010001072 DASSYW010000000
VERSION     DASSYW010001072.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2452)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2452)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2452
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1800632"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1834
                     /locus_tag="VFN38_16975"
     CDS             <1..1834
                     /locus_tag="VFN38_16975"
                     /inference="COORDINATES: protein motif:HMM:NF036516.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HET9013520.1"
                     /translation="PMTSRLPALLVAAALLMTHADSAAAQTAAEPLRYTLSFPAPQTH
                     YLEISASVPTDRRPEVELMMAVWTPGSYLVREYERNVEAVTAAGSDGRALAVVKSDKN
                     RWRITTGGAATVTVKYRVYAREMSVRTNWVEAGFALVNGAPTFLTLADRTPRAHEVVI
                     TPATGWARSVTGLPEMSGGPHRYRAPDFDTLADSPILVGNPAVYEFTLDGKKHYLVNE
                     GEGGVFDGARAVKDIEAIVREYRRMWGFLPYDKYLFLNLLTEAGGGIEHKNSTVLMAS
                     RWTTRTRRTYNAWLDLASHEFFHAWNVKRLRPVELGPFDYENEVHTKNLWIAEGVTEY
                     YADLALHRAGLITREEYLDSVSDRIEELQTTPGRLVQSAEMASFDAWIKYYRPDENSI
                     NTSVSYYTKGSVVGLLLDARIRKATNGARSLDDVMKAAYEKYSGMRGYTADEFRAVAE
                     QVAGVSLKAFWDSAVTGTDELDYKETLETLGLRFRSVAVPADRPGRAWLGIGTRNDAG
                     RLLVSQVRRDTPGMAAGLNVDDEILAIDDYRVRADRLDNRLDQYRPGDKVTLLVARRE
                     QLLRLPLTFGTEPPRAWRLEVNPAASESQQSSRGRWLNPGRASS"
     gene            1955..>2452
                     /locus_tag="VFN38_16980"
     CDS             1955..>2452
                     /locus_tag="VFN38_16980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:solute symporter"
                     /protein_id="HET9013521.1"
                     /translation="MRALDWAVVAAYLIWIVYDGLRLTKRSKEIDGYFRGNRSLPWWT
                     VGLSVMATQLSAITMIGTTGQGYVNGMRFLQFYYALPIAMVLLCLTLVPFFHNANVYT
                     AYEFLERRFDAKARAITSLLFLMSRSMSLGVVISAPSVVLSVIFGLNLTTTVALVAMP
                     AAIYTM"
BASE COUNT          388 a          863 c          816 g          385 t
ORIGIN      
        1 ccccatgact tcccggctgc ccgctctcct cgtcgccgcc gccctgctca tgacacacgc
       61 tgattccgcc gccgcccaga ccgcggccga gccgcttcgc tacaccctca gcttcccggc
      121 gccgcagacg cactacctgg aaatcagcgc ctccgtgccg accgatcggc ggcccgaggt
      181 cgagctgatg atggccgtgt ggacgcccgg gtcgtacctc gtgcgcgagt acgagcgcaa
      241 cgtcgaggcc gtcaccgccg ccgggtccga tggccgcgcg ctggcggtcg tgaagtccga
      301 caagaaccgc tggcgcatca cgaccggcgg ggcggcgacg gtcacggtca agtaccgcgt
      361 ctacgcccgc gagatgtcgg tgcgcaccaa ctgggtcgag gcgggcttcg cgctcgtcaa
      421 cggcgcgccg acctttctga cgctggcgga tcgcacgccg cgcgcccacg aagtcgtcat
      481 cacgccggcc accggctggg cccgctcggt gaccgggctg cccgagatgt ccggtgggcc
      541 gcaccgctat cgtgcgccgg acttcgacac gctcgccgac tcgccgattc tcgtcggcaa
      601 cccggcggtg tacgagttca cgctcgacgg caagaagcac tacctggtga acgaagggga
      661 aggcggcgtc ttcgacggcg cccgcgccgt gaaggacatc gaagccatcg tgcgcgagta
      721 ccgccgcatg tggggcttcc tgccgtacga caagtacctg ttcctcaacc tgctcaccga
      781 ggcgggcggc gggatcgagc acaagaactc cacggtgctg atggccagcc gctggaccac
      841 gcgcacgcgg cgcacctaca acgcgtggct cgatctggcc agccacgagt tcttccacgc
      901 gtggaacgtg aagcggctgc ggccggtgga actgggaccg ttcgactacg agaacgaggt
      961 ccacacgaag aacctgtgga tcgccgaggg cgtgaccgag tactacgccg acctcgcgct
     1021 gcaccgcgcg ggcctcatca cgcgcgagga gtatctcgac tcggtgtcgg accgcatcga
     1081 ggagctgcag accacgcccg gacgcctggt gcagtcggcc gagatggcgt ccttcgatgc
     1141 gtggatcaag tactaccggc ccgacgagaa ctcgatcaac acgtctgtga gctactacac
     1201 gaaaggctcc gtggtgggcc tgttgctcga cgcgcgcatc cgcaaggcga ccaacggtgc
     1261 caggagcctc gacgacgtga tgaaggccgc ctacgagaag tactcgggga tgcgcggcta
     1321 taccgccgac gagttccgcg ccgtggccga gcaggtggcc ggcgtcagcc tgaaggcgtt
     1381 ctgggattcc gcggtgaccg gcaccgacga actggactac aaggagacgc tcgagacgct
     1441 cggcctgcgc ttccgttcgg tggcggtgcc ggcggaccgc ccggggcgcg cgtggctcgg
     1501 catcggcacg cgcaatgacg ccggccggct gctggtgtcg caggtgcgtc gcgacacgcc
     1561 ggggatggcg gccggcctca acgtcgacga cgagatcctg gcgatcgacg actaccgcgt
     1621 gcgcgccgac cgcctcgaca accgtctcga tcagtaccgc cccggcgaca aggtgacgct
     1681 gctggtggcg cgccgcgagc agctgctgcg gctgccgctc acgttcggca ccgagccgcc
     1741 gcgcgcctgg cgcctcgagg tgaaccccgc ggccagcgag tcgcagcaga gcagccgcgg
     1801 gcgctggctg aaccctggcc gggcctcctc ctagcgtgtc cgtcaccaag gccggcaacg
     1861 gcaacgacgg catgacgtcc cgctacgtct tcgtgatcgt ggtgtgggtg gccgtgctct
     1921 cggcgctcta cgccctgcag gagtacttct cctgatgcgt gccctcgact gggccgtcgt
     1981 ggcggcctat ctgatctgga tcgtctacga cggcctccgg ctcaccaagc gcagcaagga
     2041 gatcgacggc tacttccgcg gcaaccgcag cctcccctgg tggacggtcg gcctgtcggt
     2101 catggcgacg cagctgagcg ccatcacgat gatcggcacc acggggcagg gctacgtgaa
     2161 cggcatgcgg ttcctgcagt tctactacgc gctgccgatc gcgatggtgc tgctgtgcct
     2221 cacgctggtg ccgttcttcc acaacgccaa cgtctacacc gcctacgagt tcctggaacg
     2281 gcgcttcgac gccaaggcgc gcgccatcac cagcctgctg ttcctgatgt cacgcagcat
     2341 gtcgctgggc gtcgtcatct cggcgccgtc ggtggtgctc tcggtcatct tcggcctgaa
     2401 cctcacgacc acggtggcgc tcgtggcgat gccggcggcc atctacacca tg
//
LOCUS       DASSYW010001073         3866 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1413666, whole genome shotgun sequence.
ACCESSION   DASSYW010001073 DASSYW010000000
VERSION     DASSYW010001073.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3866)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3866)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3866
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1413666"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..413)
                     /locus_tag="VFN38_16985"
     CDS             complement(<1..413)
                     /locus_tag="VFN38_16985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013522.1"
                     /translation="MYTTCLFCNQPLGENEVLEAFPVGRRVAFDADKGRLWVVCQHCE
                     RWNLTPLEERWEAIEQAERLYRDTRLRVATENIGLARLPEGLELVRIGRPERPEIAAW
                     RYGDQFGRRRRRRLITAGVVATGGALIVAGGVAAGL"
     gene            579..1421
                     /locus_tag="VFN38_16990"
     CDS             579..1421
                     /locus_tag="VFN38_16990"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like serine protease"
                     /protein_id="HET9013523.1"
                     /translation="MSHRTLSAAGLALAALLAGCAGTSATDRIAAPTGSSRIVNGSFD
                     ATNAYPSVGALMFDWDHNGLSGNDEFCTGSLISPTVFLTAAHCVVTEYTPPGSQFYVT
                     FAADLFGRNVKYIKAVSYTYDPAYGHDQANLHDLAVIILPDGSTKGMTPYRLPSRGEL
                     DALSAKGALASAIFTNVGYGTSATRTGVPGFSWDGRRNVSESEFMALQPYWLGLLMNT
                     SATGLGGDCYGDSGGPKFLNSNPGVVYATVTTGDYNCRATTWDYRTDTDDARAFLGQF
                     VKLP"
     gene            1486..2571
                     /locus_tag="VFN38_16995"
     CDS             1486..2571
                     /locus_tag="VFN38_16995"
                     /inference="COORDINATES: protein motif:HMM:NF013044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0044237 - cellular metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HET9013524.1"
                     /translation="MPLVFPFEPNIERAATIPARLYNDPVYLELERERIFAHTWQLVG
                     RSDQLREHGQFFTATVGNDALVVLRDHDALRAFYNVCLHRAGPVAQGCGKRNTLQCRY
                     HGWTYALDGTLIRAPEMQGVERFEPADMHLVPIQVATWGPLVFVNLDGKAPPLLEVLE
                     DVPRRMAPFRCESMSYVMRKEWDIACNWKVYVDNYLEGYHLPVVHPGLHKELDYDNYT
                     VEPHRYFSIQHAPLRAVHGGNPDRRYDPSRTDVAEAVYVWLFPNVMLNVYMGQMQTNV
                     VIPVGHDRCRVVFEWYSTNPPAQPATDAEWTKLLAFSDEIQDEDIEICEIVQRNLRSR
                     VYDRGRYSAARENGVHHFHSLLHEFLT"
     gene            complement(2661..>3866)
                     /locus_tag="VFN38_17000"
     CDS             complement(2661..>3866)
                     /locus_tag="VFN38_17000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013525.1"
                     /translation="RSTAAVAALVTLVGGPAGAQQATGSWQPWIGCWSAGPAIGGIAP
                     SAMAPLVCIAPTPDANVAEVTTISGDKVVSTQRIDAGGRELPVDTKGCTGTQRAQWSA
                     DGRRVYLRAVTTCDGLERVTSGIMAISPTGEWLDVQGVGVAGEEGVRVAHYRDAGLPS
                     AVPEPIAAALRARGAATPTARLTAGGTIGSAAVIEASRSAAPAVVEAWLLERGQHFAV
                     DAKELVRLADAGVPPRVTDALVALSNPEHFAVARPDDRSRNRRARMDDDDIAGRRIYV
                     YMDPIYSPYRWGYAPYGYGYGYGYGPYGYSPLGYGGYGYGSGYSGYPGYVAPIVIVNP
                     QTPVQRGQMVKGRGYTPSDASGSTTTPTATPRASSTSSGASSSGSSSSQPSSSSPPAS
                     EPRTAHPKP"
BASE COUNT          585 a         1456 c         1253 g          572 t
ORIGIN      
        1 aggcccgccg ccaccccgcc ggccacgatc agcgcgccgc ccgtcgccac cacacccgcc
       61 gtgatcaggc gccggcgccg ccgccggccg aactggtcgc catagcgcca cgccgcgatc
      121 tccggtcgtt cggggcgtcc gatccgcacg agctccagcc cttccggcag ccgcgccagg
      181 ccgatgttct cggtggcgac gcgaagccgg gtgtcgcggt agaggcgctc agcctgctcg
      241 atcgcctccc agcgctcctc gagcggcgtc aggttccagc gttcgcaatg ctggcacacc
      301 acccagagcc gtcccttgtc ggcgtcgaac gccacgcgcc ggccgacagg gaacgcctcg
      361 agcacctcgt tctcgccgag gggctggttg cagaacagac aggtcgtata cacgatcgag
      421 aatccgtccg tgcggggtgg gcggcaagtg gcgaacgggg catttgacaa ggctcgacgg
      481 aaaacgtatg actaccgccc ccgcgccgac gccggcgctg gatcctcacg cccacgagtc
      541 ggcgtgagct cgagcgaaga cctccgttca ggccccccat gtcgcatcgc acactgtccg
      601 ccgccggcct cgcgctggcc gccctcctcg ccggatgtgc cggcacctcc gccaccgatc
      661 ggattgccgc gccgaccgga tcgagtcgga tcgtcaacgg ctcgttcgac gcgaccaacg
      721 cctatcccag cgtcggcgcc ctcatgttcg actgggacca caacggcctg agcggcaacg
      781 acgagttctg caccggcagc ctcatctcgc ccaccgtgtt cctcacggcc gcgcactgcg
      841 tggtcacgga gtacacgccg cccggctcgc agttctacgt caccttcgcc gccgacctgt
      901 tcggcaggaa cgtgaagtac atcaaggcgg tcagctacac ctacgatccg gcgtacggcc
      961 acgaccaggc caatctgcac gacctcgctg tcatcatcct cccggacggg tcgacgaagg
     1021 ggatgacgcc gtaccgtctc cccagccgcg gcgagctgga cgcgctgtcg gcgaagggag
     1081 cgctcgccag cgccatcttc acgaacgtcg gctacggcac gtcggccacc cgcaccggcg
     1141 tccccggctt ttcgtgggat gggcgtcgca acgtctccga atccgagttc atggcgcttc
     1201 agccgtactg gctcgggctg ctcatgaaca ccagcgccac gggactcggc ggcgactgct
     1261 acggcgattc gggcggaccc aagttcctga actccaaccc cggcgtcgtg tacgccaccg
     1321 tcaccaccgg cgactacaac tgccgcgcga cgacgtggga ctaccgcacc gataccgacg
     1381 acgcgcgcgc gttcctcgga cagttcgtga agctgccctg atgtccggac gtccggcggc
     1441 gcgaaggccc gacccatcgc gccgccgggc gacgtatctt cactgatgcc cctcgtcttc
     1501 ccgttcgagc ccaacatcga gcgcgccgcg acgatcccgg cgcgcctgta caacgacccg
     1561 gtctacctcg agctggagcg cgagcggatc ttcgcgcaca cctggcagct cgtcggccgc
     1621 agcgatcagc tgcgcgagca cggccagttc ttcacggcca cggtgggcaa cgacgcactc
     1681 gtcgtgctgc gcgatcacga cgcgctgcgc gccttctaca acgtctgcct ccatcgcgcc
     1741 ggtccggtgg cccagggctg cggcaagcgg aacacgctcc agtgccgcta ccacgggtgg
     1801 acgtatgcgc tcgacggcac cctcatccgt gcgccggaga tgcagggcgt cgagcggttc
     1861 gagccagccg acatgcacct cgtgcccatc caggtcgcga cgtggggacc gctcgtcttc
     1921 gtgaacctcg acggcaaggc gcccccgctc ctggaggtgc tcgaggacgt cccccgacgc
     1981 atggcgccct tccgctgcga atcgatgagc tacgtcatgc ggaaggagtg ggacatcgcc
     2041 tgcaactgga aggtgtacgt cgacaactac ctcgagggct accacctccc ggtcgtgcac
     2101 ccggggctgc acaaggagct cgactacgac aactacaccg tcgagccgca tcgctatttc
     2161 tccatccagc acgcgccgct gcgggccgtg cacggtggca atcccgaccg gcgatacgat
     2221 ccttccagga ccgacgtcgc cgaagcggtc tacgtctggc tctttccgaa cgtgatgctc
     2281 aacgtctaca tggggcagat gcagacgaac gtcgtgatcc ccgtgggcca cgaccggtgc
     2341 cgcgtggtgt tcgagtggta ctcgacgaac ccgccggccc agccggcgac ggacgccgag
     2401 tggacgaagc tgctcgcgtt cagcgacgag atccaggacg aggacatcga gatctgcgag
     2461 atcgtccagc gcaaccttcg ctcgcgcgtc tacgaccgcg gccgctactc ggcggcgcgg
     2521 gagaacggcg tgcaccactt ccactcgctg ctgcacgagt ttctcacgtg acggcacgcg
     2581 cccggtgcag cgccggggtg tgacgacgaa gggccgggct ccgcgaacgg agcccggccc
     2641 ttcaagcgtg gtgccggccg ctatggcttg ggatgcgcgg tgcgcggctc gctcgccggc
     2701 gggctgctcg aggacggctg gctgctgctc gatcccgagc tggacgcccc cgagctggtg
     2761 ctcgacgccc gcggcgtcgc ggtgggagtc gtcgtcgagc cgctcgcgtc gctcggcgtg
     2821 tatccgcgcc ccttcaccat ctggccgcgc tgcaccggcg tctgcggatt cacgatgacg
     2881 attggcgcca cgtagcccgg atagccggag tagccggagc cgtacccgta cccgccgtac
     2941 cccagcggcg aatagccgta cgggccgtag ccgtatccgt agccgtaccc gtacggggcg
     3001 tagccccacc ggtacggcga gtagatcgga tccatgtaga cgtagatgcg gcggccggcg
     3061 atgtcgtcgt cgtccatccg ggcgcgacga ttgcgcgacc ggtcgtcggg ccgggccacg
     3121 gcgaaatgct cggggttgga gagggcgacc agcgcatcgg tcacgcgagg cggaaccccc
     3181 gcatcggcca gccgcaccag ctccttcgcg tccacggcga agtgctggcc tcgctcgagc
     3241 agccatgctt ccacgaccgc gggcgcggcg ctcctggacg cctcgatcac cgccgccgac
     3301 ccgatcgtcc cgccggcggt caaccgagcg gtgggcgtcg ccgccccgcg cgcgcgcagc
     3361 gccgcggcga tcggctccgg aaccgcgctc ggcaggccgg cgtcgcgata gtgcgcgacg
     3421 cgcacgcctt cctcgcccgc cacccccacg ccctgcacgt cgagccactc gccggtcggc
     3481 gagatcgcca tgatccccga cgtcacgcgc tccagcccgt cgcaggtcgt caccgccctg
     3541 aggtagacgc ggcgaccgtc ggcggaccac tgcgcgcgct gtgtgcccgt gcagcccttg
     3601 gtgtccaccg gcagctcgcg gcccccggcg tcgatgcgct gggtgctcac caccttgtcg
     3661 ccgctgatcg tcgtcacttc ggcgacgttc gcgtccggcg tgggggcgat gcacacgagc
     3721 ggcgccatcg ccgacggcgc gatgccgccg atcgccggtc ccgcgctcca gcatccgatc
     3781 cagggctgcc agcttcccgt cgcctgctgc gcgccggccg gcccgccgac gagcgtcacc
     3841 aacgccgcca ccgcggcggt cgaccg
//
LOCUS       DASSYW010001074         2550 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_218269, whole genome shotgun sequence.
ACCESSION   DASSYW010001074 DASSYW010000000
VERSION     DASSYW010001074.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2550)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2550)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2550
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_218269"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..767)
                     /locus_tag="VFN38_17005"
     CDS             complement(<1..767)
                     /locus_tag="VFN38_17005"
                     /inference="COORDINATES: protein motif:HMM:NF013632.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HET9013526.1"
                     /translation="MNPYVVVTAFAFLVGLCVGSFLNVCISRWPADLSVIRPRSRCPN
                     CGHQLAWFENVPVVSWLVLRARCRCCDERISAIYPIGEILVGVLWAVCVSHWGPTFTA
                     LRVAVFLTILTGIALTDLRHYLIPDGFTITGLLWTLGTALAAPFIEETLLFAGPYDAL
                     IGACAGAGVIAIVGWLGEAALKREAMGMGDMTLMAFAGAALGPARALVTVFLAAAIGA
                     IVFLMVVYPIAFIRRGRVASQTELALGASPVDLPLVP"
     gene            complement(764..1522)
                     /locus_tag="VFN38_17010"
     CDS             complement(764..1522)
                     /locus_tag="VFN38_17010"
                     /inference="COORDINATES: protein motif:HMM:NF012797.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0001510 - RNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HET9013527.1"
                     /translation="MKLLTLARDLRRRKARERHHLFAAEGVRAVEELVRSPLSIRGVL
                     VAPQLVDAPRGAALLAALRQRGVELAEVSALEFASAAETDSPQGVLAVAAIPDRSLDG
                     LALPPRTRLVLLDGVQDPGNVGTIVRTAAALGATAVVALPGTVDLWNAKVVRSAMGAS
                     FHVPAFFSTWEEVDVFRRRESVALWGADAGGTPLEALAAPDRLALVVGNEGAGLSSES
                     RARVEVLASLPIASAIESLNVAVATGILLYQLRT"
     gene            1606..2409
                     /locus_tag="VFN38_17015"
     CDS             1606..2409
                     /locus_tag="VFN38_17015"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HET9013528.1"
                     /translation="MRRLMAGFALAISMTGCGVSTQQEVEMGQQYAAQINQQLPIVQD
                     PELNRYINVLGDSIARLTERQDLPEWRFYIVDSKEVNAFAVPGGFVYVNRGLIERTQR
                     MDQLAGVLGHEIGHVVRRHSIKQMQQQQGANIGVTLACVLTSVCNNQAGQAAIQVGGT
                     ALFAKFSRGDEAEADEEGIKNVVRAGISPNGIPEMFQILINERQSNPSGVENWFATHP
                     LEEDRIAATRQTIAQYSPAILRSLATDSRNYQSFKARLRSLPPSPTPRR"
BASE COUNT          464 a          820 c          952 g          314 t
ORIGIN      
        1 aacggcacga gggggaggtc gacgggggag gcgccgagcg cgagctcggt ctgggaggcc
       61 acgcgtccgc gccggatgaa ggcgatggga tacaccacca tcaggaagac gatggcgccg
      121 atggcggcgg cgaggaagac ggtgacgagg gcgcgcgccg gcccgagcgc ggcgccggcg
      181 aacgccatga gcgtcatgtc gcccatcccc atcgcttcgc gcttgagcgc cgcctccccc
      241 agccagccga cgatggcgat gacgcccgct ccggcgcagg cgccgatgag ggcgtcgtac
      301 gggccggcga agaggagggt ctcctcgatg aagggcgcgg cgagggcggt gccgagcgtc
      361 cagagcagcc cggtgatggt gaagccgtcg gggatgaggt agtgccgcag gtcggtgagc
      421 gcgatgccgg tgaggatggt gaggaagacg gcgacacgca gcgcggtgaa ggtcggtccc
      481 cagtgcgaca cgcacaccgc ccacagcacg ccgacgagga tctcgccgat gggatagatg
      541 gccgagatcc gctcgtcgca gcagcggcag cgggcgcgca gcaccagcca gctcaccacc
      601 ggcacgttct cgaaccaggc gagctggtgg ccgcagttgg ggcagcgcga acgcgggcgg
      661 atcacgctca gatccgccgg ccaccgggag atgcagacgt tgaggaagga gccgacgcag
      721 agccccacga ggaaggcgaa tgccgtgacg acgacgtagg gattcacgtg cgcagctgat
      781 agagaaggat gcccgtggcg accgccacgt tgagcgactc gatggcgctg gcgatgggca
      841 gcgacgccag gacttccacc cgcgcgcgcg actcggagga gaggccggcc ccctcgttgc
      901 cgacgacgag cgcgagccgg tcgggcgccg cgagggcctc cagcggcgtg cccccggcgt
      961 cggcgcccca cagggcgacc gattcgcggc gacggaacac gtccacctct tcccaggtag
     1021 agaagaaggc gggcacgtgg aagctggcac ccatcgcact acggacgacc ttggcattcc
     1081 agaggtcaac ggttcccggc agcgcgacca ccgcggtggc gcccagggcg gcggccgtcc
     1141 gcacgatcgt cccgacgttg cccgggtcct gaacgccgtc gaggagcacg agccgtgttc
     1201 tggggggtag ggcgaggccg tcgagcgacc ggtcggggat cgccgcaacg gcgaggacgc
     1261 cctgcgggga gtcggtctcg gccgcgctcg cgaactcgag ggcggacact tcggcgagct
     1321 cgacgccgcg ctgccggagc gccgcgagga gcgccgcgcc ccgcggggcg tcgacgagct
     1381 gcggcgcgac gaggacgccg cgaatggaga ggggggagcg cacgagctcc tcgacggcgc
     1441 gcactccctc ggcggcgaag aggtgatggc gctcgcgcgc tttccggcgc cggaggtcgc
     1501 gggctaaggt tagcagcttc aagacgttag gattttcgcc agcgggaatg ggtcttgcgc
     1561 atagcgcggt agaccgcttc gaccacgata gggagagaga ggaccatgag acgactgatg
     1621 gccggcttcg cgctggcgat aagcatgacg gggtgcggag tctcgacgca acaggaagtc
     1681 gagatgggcc agcagtacgc cgcccagatc aaccagcagc tgccgatcgt gcaggatccg
     1741 gagctgaacc ggtacatcaa cgtgctgggc gactcgatcg cgcggctcac cgagcggcag
     1801 gacctgccgg agtggcgctt ctatatcgtg gacagcaagg aagtgaacgc cttcgccgtc
     1861 cccggcgggt tcgtgtacgt gaaccgcgga ctgatcgagc gcacgcagcg catggaccag
     1921 ctcgcgggcg tgctcggcca cgagatcggg cacgtcgtcc ggcgccactc gatcaagcag
     1981 atgcagcagc agcagggcgc caacatcggc gtcaccctgg cgtgcgtgct gaccagcgtg
     2041 tgcaacaacc aggcgggcca ggcggccatc caggtgggcg gcacggcgct gttcgcgaag
     2101 ttcagccgcg gcgacgaggc cgaggccgat gaggagggga tcaagaacgt ggtccgcgcg
     2161 gggatcagcc cgaacggcat cccggagatg ttccagatcc tcatcaacga gcggcagtcg
     2221 aacccgtcgg gggtggagaa ctggttcgcc acgcacccgc tggaagagga ccgcatcgcc
     2281 gccacccggc agacgatcgc ccagtacagc ccggccatcc ttcgctcgct cgcgaccgac
     2341 tcgcggaact accagagctt caaggcccgg ctccggtcgc tgccgccgtc gccgacgccg
     2401 agacggtaaa gcggcaaggc ggtagggcgg tttgacgata aggcggtaac gacgaagggc
     2461 acaccggacg gagtccggcg tgcccttctg ctttcaacgc ccgtaccgtt caccgttcac
     2521 cgttcaccgt tcacggttta cggttcacgg
//
LOCUS       DASSYW010001075         3095 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1286712, whole genome shotgun sequence.
ACCESSION   DASSYW010001075 DASSYW010000000
VERSION     DASSYW010001075.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3095)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3095)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3095
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1286712"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2539)
                     /locus_tag="VFN38_17020"
     CDS             complement(<1..2539)
                     /locus_tag="VFN38_17020"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HET9013529.1"
                     /translation="MTGHAPVPGMGLVRALALVVPSPRRAEWVAEWEGELHHAWRELA
                     RSDDDTLLARTALRARALGAVRDAVWLRRHHGAHDMLGLDLKYAVRGLRRRPGFTAVV
                     VLTLALGIGATTAIFSVVNGVLLRPLPYPEPERLVYVRGQPTDGDVAKVGTAQSYLDY
                     LDIRARTRSFSSLAAVRAATQTLTLRGMEPTLVSEGVASANLFPTIGVRPALGRGFLP
                     ADELPGAPPVAVLGDEIWRARFGADPGVLGASIRLDGVPVTVVGVLPAGFRYRVATQL
                     WRPLVPTRIDEERGTHQYALIGRLAPGVTLEAAASEARAIARTLEAQYPADNAKRSAR
                     LEPMRDVMVGEARPALLVLFGAVTLVLLIGCANLASLFLARAAAREREVAVRAALGAG
                     RGRLLRQFLTESLLLTMIGGAAGLGVAWAGMRTLLAVAPRTIPRADEVALDLPVLLFL
                     FAASVLTGLAFGVLPALQLRRGASSIASLKDGARGATPGAARRRMRQGLVVGEVALAT
                     VLVVGAALLLKSFWLMQRVDPGFTADGLLVAQLELPSTRYGEPAKVTRFFERLRAELE
                     GAPEVRDVAIAYEHPLGEGWTSSFTIEGRDPPPVGQEPEARVRPVQPGYFRTVGVRLL
                     RGRDVSDREVAGGPGAVVVNEAFARLHFPNEDPIGRRIARGSWFEGMPSSYEIVGVAA
                     DEPFLGLGHRADPAIYYSHAQFPMNAMWIIVRAKGDPLALAPVLRERVRRLDADLPLD
                     EVRTMREVVGASVAEPRFNAALLSLFAGAALLLAAVRTSGVLSYTVLQRTSEIGVRMA
                     LGAPRARVLRLVVGEGVGVAMLGVALGTAVALAFARVLASLLTAVDAH"
     gene            complement(2588..2920)
                     /locus_tag="VFN38_17025"
     CDS             complement(2588..2920)
                     /locus_tag="VFN38_17025"
                     /inference="COORDINATES: protein motif:HMM:NF015513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HET9013530.1"
                     /translation="MPTPVRVTRPTALVLFAIARGLRHGFDILDATGLQSGTAYPILR
                     RLEDAGLLRSRWEAVTRARAEGRPPRRYYELTGAGAEALREALARHPGLARAFAPAGG
                     GLPHPRPA"
BASE COUNT          451 a         1157 c         1150 g          337 t
ORIGIN      
        1 cgtgcgcgtc caccgcggtc agcagcgagg ccagcacccg cgcgaaggcg agcgccacgg
       61 cggtgccgag ggcgacgccg agcatcgcga cgccgacccc ctcgccgacg acgaggcgca
      121 ggacgcgcgc tcgcggcgcg ccgagcgcca tccggacgcc gatctcgctc gtccgctgga
      181 gcaccgtgta ggagaggacg ccggacgttc ggacggcggc caggaggagc gcggccccgg
      241 cgaacagtga gaggagcgcg gcgttgaatc gcggctcggc gaccgatgcc ccgaccacct
      301 cgcgcatcgt ccgcacctcg tcgagcggca ggtcggcgtc gagacgccgg acccgttcgc
      361 gcagcaccgg agcgagcgcc agcggatccc ccttcgcgcg gacgatgatc cacatcgcgt
      421 tcatcgggaa ctgcgcgtgc gagtagtaga tcgccggatc ggcgcgatgg ccgagcccca
      481 ggaagggctc gtcggccgcc acgccgacga tctcgtacga gctcggcatg ccctcgaacc
      541 aggagccgcg cgcgatccgc ctgccgatcg ggtcctcgtt ggggaaatgc aggcgcgcga
      601 acgcctcgtt gacgacgacg gcccccgggc cgccggcgac ctcgcgatcg ctcacgtcgc
      661 ggccgcgcag cagccgcacc ccgacggtgc ggaagtagcc cggctgcacc ggccgcacgc
      721 gcgcctccgg ctcctgtccc accggtggcg ggtcgcgtcc ctcgatcgtg aagctcgacg
      781 tccacccctc ccccagcggg tgctcgtacg cgatggcgac gtcgcgcacc tcgggcgcgc
      841 cctcgagctc cgcgcgcagc cgctcgaaga agcgcgtcac cttcgccggc tcgccgtagc
      901 gcgtggacgg cagctcgagc tgcgccacca gcagcccgtc ggcggtgaac cccggatcca
      961 cccgctgcat cagccagaag ctcttgagca gcagcgccgc gccgacgacg agcacggtcg
     1021 ccagcgccac ctccccgacg acgagtccct gtcgcatccg gcgccgggcg gcgcccggcg
     1081 tcgcgccgcg cgccccgtcc ttgagcgacg cgatcgacga ggcgccacgg cgaagctgga
     1141 gcgctggcag gacgccgaag gcgagaccgg tgagcaccga ggcggcgaac aggaagagca
     1201 gcaccggcag gtcgagcgcc acctcgtcgg cccgcgggat cgttcgcggc gcgacggcga
     1261 gcagggtccg catcccggcc cacgccacgc cgagtcccgc cgcgccgccg atcatcgtca
     1321 ggagcagact ctcggtcagg aactggcgca gcagccttcc gcgccccgcg ccgagcgccg
     1381 cgcgcacggc gacctcgcgc tcgcgcgccg cggctcgggc caggaagagg ctggcgaggt
     1441 tcgcgcagcc gatcagcagc acgagcgtca ccgcgccgaa cagcacgagg agcgcggggc
     1501 gcgcctcccc caccatcacg tcgcgcatcg gctcgagccg cgcgctccgc ttcgcgttgt
     1561 cggcgggata ctgtgcctcg agggtgcggg cgatcgcgcg cgcctcgctc gccgccgcct
     1621 cgagcgtcac acccggcgcg agccggccga tcagcgcgta ctgatgggtg ccgcgctcct
     1681 cgtcgatcct cgtcgggacg agcgggcgcc agagctgggt cgcgacgcga tagcggaaac
     1741 cggccggcag cacgcccacc accgtcaccg gcacgccgtc gagccggatc gaggcgccga
     1801 ggacgcccgg atcggcgccg aagcgggcgc gccagatctc atcgccgagc accgcgaccg
     1861 ggggcgcgcc gggcagctcg tcggcgggca ggaagccgcg tcccagcgcc ggccgaacgc
     1921 cgatcgtcgg gaagaggttg gcgctggcca ccccctcgct gacgagcgtc ggctccattc
     1981 cccgcagggt gagcgtctgg gtcgccgcgc gcacggcggc gagcgaggag aaggagcgcg
     2041 tccgggcgcg gatgtcgagg tagtcgagat acgactgcgc cgtccccacc ttcgcgacgt
     2101 cgccgtccgt cggctggccg cgcacgtaga cgaggcgctc cggctccggg taggggagcg
     2161 gacggaggag cacgccgttg acgacgctga agatcgccgt cgtggcgccg attccgagcg
     2221 cgagggtgag gaccaccacc gccgtgaagc ccggccgccg gcgcaggccg cggaccgcgt
     2281 acttgaggtc gagaccgagc atgtcgtgcg ctccgtggtg acgtcgcagc cagaccgcgt
     2341 cgcggacggc gcccagcgcg cgcgcccgca gcgcggtccg cgcgagcagg gtgtcgtcgt
     2401 ccgaacgcgc gagctcgcgc caggcgtgat ggagttcccc ttcccactcc gccacccact
     2461 ccgcgcgccg cggcgacggc acgaccagag ccagggcgcg gacgagtccc atgcccggca
     2521 ccggcgcgtg gccggtcacc gacgggaggt cgccattcgg tggagactgg gcgctcagcg
     2581 tcccccctca ggcgggacga ggatggggca ggccgccgcc ggccggcgcg aacgcccggg
     2641 cgagcccggg atggcgcgcc agcgcctccc gcagcgcctc ggcgccagcg ccggtgagct
     2701 cgtaatagcg gcgcggggga cgcccttcgg cgcgagcccg ggtcaccgct tcccagcgcg
     2761 accggaggag cccggcgtcc tcgagccggc gcaggatggg atacgcggtg ccgctctgca
     2821 ggccggtcgc gtcgaggatg tcgaagccat ggcgcaggcc gcgtgcgatc gcgaacagca
     2881 cgagggcggt gggccgggtg acgcgaaccg gggtcggcac gggaagcgga gtcgcgggtg
     2941 aagtctacct atgtagagtt ttgtggcgtc gggccgatcc gtcaagagcg gggcggacga
     3001 ccttacgaaa cgcgaacggc gaccggcgct gtgcaagcgc gccggtcgcc gttcgaatct
     3061 cgtgggaccc ccgggacgac tgctgcctca gctcg
//
LOCUS       DASSYW010001076         5206 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1651454, whole genome shotgun sequence.
ACCESSION   DASSYW010001076 DASSYW010000000
VERSION     DASSYW010001076.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 5206)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5206)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5206
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1651454"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(43..561)
                     /locus_tag="VFN38_17030"
     CDS             complement(43..561)
                     /locus_tag="VFN38_17030"
                     /inference="COORDINATES: protein motif:HMM:NF012309.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006801 - superoxide metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase family protein"
                     /protein_id="HET9013531.1"
                     /translation="MKALRISLPVLLVLSACSVLGVGSVERADVPMRDAAGRALGTLT
                     LANTTGGLLLTGVLHDLPPGTHGIHLHAVGRCEPPFATAGGHWNPTNRLHGTQNPQGP
                     HLGDMPNVVASADGAVLVSVMTPGGTLRGTDAVLDADGAAVVIHAAADDYRTDPSGNS
                     GARIACGVVGGT"
     gene            complement(640..2052)
                     /locus_tag="VFN38_17035"
     CDS             complement(640..2052)
                     /locus_tag="VFN38_17035"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HET9013532.1"
                     /translation="MRMLMTRRVTLAAAAAVTALVAALPAGAQQPARETPPPLGTPKA
                     FTLPPKREVTLANGMRVTFVPFGTIPKVSVYTMVGTGHIDEGGNEVALSDVTGEMMRE
                     GTATRSATQVAEEVAGMGGELGVFVGDDRTQVGGAVLSERGPDMVRLEADLLRNPRFP
                     ESELARIVANKAREVAIAKSQPQSLAQEQFLKTLYGDHPYGRLFPTDTMLKSYTIAQV
                     RQFHARNFGAARAHLYVVGVFDQRAMERAVREAFEGWAPGSPPTVKPPAPRAAHAVTL
                     LDRSKAVQSTIMLGLPVPPPTARDYTALQVTDALLGGTFGSRVTTNIREQKGYTYSPY
                     SYIGTHRRDAYWVQQADVTTQHTGASLKEIFAEIDRLQKEAPGTPELSGIKNNMIGLF
                     TLRNASRGGIINQLAEADLQGLGDDYLSGYVRRVMAVSPAEVQRIAATYLTPERMTLV
                     VVGDKATVAEQLAPFQRPIP"
     gene            complement(2067..3470)
                     /locus_tag="VFN38_17040"
     CDS             complement(2067..3470)
                     /locus_tag="VFN38_17040"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HET9013533.1"
                     /translation="MMPRSRSRLFGLLALAAAAAAPPAAAQPRAGTPLRVPIEYYTLP
                     NGLKVVLSRETTVPTAVVAVYYNIGFRNEPRNRTGFAHLFEHLMFQGSQNLGKMEFIR
                     LVEQNGGILNGSTRFDFTNYFQVVPTHAVRRILWAEADRMRGLAIDTANVNNQRDVVK
                     NEVRVNVINQPYGGFPWIDLPVAANTNWYNAHNFYGDMTDLDSASLADASSFFRTFYA
                     PNNAVLVVTGDIDVASTKAWIAEYFAKIPPATLPAKPDLTEPRQTAEKRVTRIDSLAN
                     RPAIGIGYHVPERFTPEWYAFGLLDQLIAQGRDSRFYQELVQKRGLTGGVDAGINFGL
                     GSMYDYQGPMLYEIQAFHDSDKSQEAMVAGFEAAIEPLRAAPVDQATLDRALVKLRSS
                     LYAEMEQFAGFGRANLLASFALFDDDPERINQLEKGFAQVTPALLQRTAQEYLRPTNR
                     TIVFIVPAAKAATTGTH"
     gene            3668..>5206
                     /locus_tag="VFN38_17045"
     CDS             3668..>5206
                     /locus_tag="VFN38_17045"
                     /inference="COORDINATES: protein motif:HMM:NF015338.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /protein_id="HET9013534.1"
                     /translation="MTFHPRVRSLRILSAALLAGCAINPGVGGGRSGRPTARVLVYNI
                     HAGKDAAGADNLTAVADLVRGTGADVALLQEVDQRTRRSGGVDQPAVLAARTGMHVAF
                     GSALDYDGGKYGVAVLSRWPIVSDTLIHLPVTPAQERAGGSREPRGALRVTVAGPTGR
                     LTILDTHLDASGTDQWRRQEADSIVSLVAQARRADEIVIAGGDFNSTPESAVQGAVRA
                     GGLRDAWAECASGDGLTYPAGVPVKRIDYLFLTGDVRCSSARVLETLASDHRPLFVEL
                     QLPAGTPLAAAPSSAPASGNIDPRTPLSPAQRDWVERTLASMSLRERAGQMVNVWVLG
                     DYTNTRDSSFAEVLRWIRDDHVGGVAMSLGSPIEVAEKINAMQRAARVPLLVGADLEP
                     NLGRLEGGVFTHYLMDAGGATVFPNAMAIAATGRVQDAYDVGRATGREAKAVGILMNF
                     APVVDVNNNPANPVINTRSFGEEARRVAALSAAFVKGSQDAGVIATIKHFPGHGDTAV
                     DSHVG"
BASE COUNT          697 a         1822 c         1918 g          769 t
ORIGIN      
        1 cgagcgctcg ggcgtcttcg cgcgcgtccg gggccgcgcc gttcacgttc cgcccaccac
       61 gccgcatgcg atgcgcgcgc cggagttgcc ggatgggtcg gtgcgatagt cgtccgcggc
      121 cgcgtggatc accacggcgg cgccgtcggc atccagcacg gcatcggtgc cgcgaagggt
      181 gccgcccggc gtcatgacgc tcaccagcac ggcaccgtcg gccgacgcca cgacgttggg
      241 catgtcgccg aggtggggac cctgcgggtt ctgcgtcccg tgcaggcggt tcgtggggtt
      301 ccagtgccca cccgccgtgg cgaacggcgg ctcgcaccgt cccaccgcgt ggaggtggat
      361 gccatgggtg ccgggcggga gatcgtgcag cacgcccgtc agcagcagac cgcccgtggt
      421 gttggcgagg gtgagcgtgc ccagggcgcg tcccgccgcg tcgcgcatcg ggacgtcggc
      481 ccgctcgacg ctgcccacgc cgagcacgga gcaggccgac agcacgagga ggaccggcag
      541 ggagatgcga agcgccttca tggagcctcc gggaaccggg tggagagcgc ggcggccgcg
      601 tcgccggcgc cgcgctctcc tcaatgtaca gccccggccc tacgggatcg ggcgctggaa
      661 gggcgcgagc tgctccgcca ccgtcgcctt gtcgccgacg acgacgagcg tcatccgctc
      721 cggcgtcagg tacgtcgccg cgatccgctg cacctcggcc ggcgacaccg ccatcacgcg
      781 ccgcacgtag ccgctcaggt agtcgtcgcc gagcccctgg agatcggcct cggccagctg
      841 gttgatgatc cccccgcgcg acgcgttccg gagcgtgaag aggccgatca tgttgttctt
      901 gatcccgctc agctccggcg tgcccggcgc ctccttctgc agccggtcga tctcggcgaa
      961 gatctccttg agcgaggcgc cggtgtgctg cgtcgtcacg tcggcctgct gcacccagta
     1021 cgcgtcgcgg cggtgcgtgc cgatgtagct gtagggcgag taggtgtagc ccttctgctc
     1081 ccggatgttg gtggtgacgc gcgagccgaa ggtgccgccc agcagcgcgt cggtcacctg
     1141 gagcgcggtg tagtcccgtg ccgtgggagg cgggacgggg agcccgagca tgatggtgga
     1201 ctgcaccgcc ttggaccggt cgagcagggt gactgcatgg gcggcgcgcg gggccggcgg
     1261 cttcaccgtg ggcgggctgc ccggcgccca tccctcgaac gcctcgcgca ccgcgcgctc
     1321 catcgcgcgc tggtcgaaga cccccaccac gtacaggtgc gcgcgcgccg cgccgaagtt
     1381 gcgggcgtgg aactgccgca cctgcgcgat ggtgtagctc ttcagcatcg tgtcggtggg
     1441 gaagagccgg ccataggggt ggtcgccgta cagcgtcttc aggaactgct cctgcgccag
     1501 cgactgcggc tggctcttcg cgatggccac ctcgcgcgcc ttgttggcga cgatgcgcgc
     1561 gagctcgctc tccggaaagc gcgggttgcg cagcaggtcg gcctcgaggc gcaccatgtc
     1621 gggcccgcgc tcggagagca cggcgccccc cacctgggtg cggtcgtcgc ccacgaacac
     1681 gcccagctcc ccgcccatcc ccgcgacctc ctcggcgacc tgcgtcgcgg agcgcgtcgc
     1741 cgtgccctcg cgcatcatct cccccgtgac gtcggagagg gcgacctcgt tccccccttc
     1801 gtcgatgtgg ccggtgccga ccatcgtgta gaccgacacc ttggggatgg tgccgaacgg
     1861 gacgaaggtg acccgcatcc cgttggcgag ggtgacctct cgcttcggcg gcagggtgaa
     1921 cgccttggga gtgccgagcg gcggcggggt ctcgcgcgcc ggctgctgtg cgccggccgg
     1981 cagcgcggca acgagcgccg tcaccgccgc ggccgcggcc agggtcaccc gccgagtcat
     2041 gagcattcgc atggtcgtct ccgcggtcag tgggtgcccg tggtggcggc cttcgccgcc
     2101 ggcacgatga acacgatggt gcggttggtg ggccgcaggt attcctgcgc cgtgcgctgc
     2161 agcagcgcgg gcgtcacctg ggcgaatccc ttctcgagct ggttgatgcg ctcggggtcg
     2221 tcgtcgaaca gggcgaacga cgccagcagg ttcgcgcggc cgaagccggc gaactgctcc
     2281 atctcggcgt agagcgacga gcgcagcttc acgagcgccc ggtcgagggt cgcctggtcc
     2341 accggcgcgg cccgcagcgg ctcgatggcg gcctcgaatc ccgccaccat cgcctcctgc
     2401 gacttgtcgc tgtcgtggaa ggcctggatc tcgtacagca tcgggccctg gtagtcgtac
     2461 atgctgccga gcccgaagtt gatccccgca tccacgccgc cggtgaggcc gcgcttctgc
     2521 accagctcct ggtagaagcg cgagtcacgc ccctgggcga tgagctggtc gaggagcccg
     2581 aaggcgtacc actccggggt gaagcgctcg ggcacgtggt agccgatgcc gatggccggc
     2641 cggttggcga gcgagtcgat gcgcgtgacg cgcttctccg ccgtctgcct cggctcggtg
     2701 aggtccggct tcgccggcag cgtcgccggc gggatcttcg cgaagtactc ggcgatccac
     2761 gccttcgtcg aggccacgtc gatgtcgccg gtgacgacga gcacggcgtt gttcggcgcg
     2821 tagaaggtgc ggaagaagct cgacgcgtcg gcgagcgacg ccgaatcgag gtcggtcatg
     2881 tcgccgtaga agttgtgcgc gttgtaccag ttggtgttcg ccgccaccgg caggtcgatc
     2941 caggggaatc cgccgtacgg ctggttgatc acgttcacgc gcacctcgtt cttcacgacg
     3001 tcgcgctggt tgttcacgtt ggccgtgtcg atcgccagcc cgcgcatgcg gtccgcctcc
     3061 gcccacagga tgcggcgcac ggcgtgggtg gggaccacct ggaagtagtt cgtgaagtcg
     3121 aagcgggtgg agccgttgag gatcccgccg ttctgctcga cgaggcggat gaactccatc
     3181 ttgccgaggt tctgcgagcc ctggaacatg aggtgctcga acaggtgcgc gaagccggtg
     3241 cggttacgcg gctcgttccg gaacccgatg ttgtagtaga cggcgaccac cgccgtgggc
     3301 acggtcgtct cgcgcgagag cacgaccttg agcccgttcg ggagggtgta gtactcgatc
     3361 ggcacgcgca gcggggtgcc ggcgcgcggc tgcgcggcgg cgggtggggc ggccgcggcc
     3421 gcggcgagcg cgaggaggcc gaacagccgg gaacgcgagc ggggcatcat ggggatggct
     3481 ccgggtggtg agacgggtct gccgcgcaac gctggctcgc ccgcaccggg gcgtcaagca
     3541 cgcgcggcgg gtcgtcgcga cgggtggtga tgcagacgaa acggagggga ggggcgcggg
     3601 gtttcgaccg cgggcgccgg ggggcggcga cgagacagcg ggatgcacgc gcgttaacgt
     3661 attcgccatg acattccatc cccgggtccg ctccctccgc atcctgtcag ccgccctgct
     3721 cgccggctgc gcgatcaacc ccggcgtggg gggcggccgc tccggccggc ccaccgcccg
     3781 ggtgctcgtg tacaacatcc acgcgggcaa ggacgccgcg ggcgccgaca acctgaccgc
     3841 cgtcgcggac ctcgtccgcg gcaccggcgc ggacgtcgcg ctcctccagg aggtggacca
     3901 gcgcacccgc cgctcggggg gcgtggacca gcccgcggtg ctcgcggcgc gcacgggcat
     3961 gcacgtcgcc ttcggcagcg cgctcgacta cgacggcggc aagtacggcg tcgccgtgct
     4021 gtcgcggtgg cccatcgtga gcgacacgct catccacctg ccggtgacgc cggcgcagga
     4081 gcgggccggc ggatcgcgcg agccgcgcgg tgcgctgcgc gtcacggtgg cgggccccac
     4141 ggggcgcctg acgatcctcg acacgcacct cgacgcctcc ggcaccgacc agtggcggcg
     4201 ccaggaggcg gactccatcg tgagcctcgt cgcccaggcc cgccgggccg acgagatcgt
     4261 gatcgccggc ggcgacttca actccacgcc ggagagcgcg gtgcagggcg ccgtgcgggc
     4321 gggcgggctg cgggacgcct gggccgaatg cgcgagcggc gacggcctca cctacccggc
     4381 cggcgttccg gtgaagcgca tcgactatct cttcctcacc ggcgacgtcc gctgcagctc
     4441 ggcgcgcgtg ctggagacgc tggcgtccga ccaccgcccg ctgttcgtgg agctccagct
     4501 tcccgccggc acgcccctcg ccgccgcgcc gtcgtccgcc cccgcgagcg gcaacatcga
     4561 cccgcgcact ccgctctcgc ccgcgcagcg cgactgggtg gagcggaccc tcgcctcgat
     4621 gtccctgcgc gagcgcgccg gccagatggt caacgtctgg gtgctcggcg actacaccaa
     4681 cacccgcgac tcgagcttcg ccgaagtgct gcgctggatc cgcgacgacc acgtgggcgg
     4741 cgtcgcaatg tcgctcggct cgccgatcga ggtggcggag aagatcaacg ccatgcagcg
     4801 cgccgcgcgc gtgcccctgc tggtgggcgc ggacctggag ccgaacctcg gccggctcga
     4861 ggggggcgtg ttcacccact atctgatgga tgccggcgga gccacggtgt ttccgaacgc
     4921 gatggcgatc gcggcgaccg gccgcgtgca ggatgcatat gacgtcggac gcgcgaccgg
     4981 acgcgaggcg aaggccgtcg ggatcctgat gaacttcgcg cccgtggtgg acgtgaacaa
     5041 caaccccgcc aatccggtga tcaacacgcg ttcgttcggc gaggaggcgc ggcgcgtcgc
     5101 ggcgctctcg gcggcgttcg tgaaaggctc gcaggacgcc ggcgtcatcg cgacgatcaa
     5161 gcacttcccc ggccatggcg acaccgccgt cgactcccac gtcggc
//
LOCUS       DASSYW010001077         5421 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_372073, whole genome shotgun sequence.
ACCESSION   DASSYW010001077 DASSYW010000000
VERSION     DASSYW010001077.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 5421)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5421)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5421
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_372073"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1159
                     /locus_tag="VFN38_17050"
     CDS             <1..1159
                     /locus_tag="VFN38_17050"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HET9013535.1"
                     /translation="VRHRARTLLAILGVAVSAGMLLDMVMLSSGMRESFRSLLLSQGF
                     QLRLAPKGTLPFDTDATIRDADALVAALRSRPDVERVSPVLGGQLHVPTASGTVTSAV
                     LGVEPLVQGDYELVQGRHPAAPDELVANDAMLRATRSRLGDTLTAAAGYDAQLRGLSG
                     VRRLRLVGRVRFIYMAAEQRGAAMPLATLRAMQGPDARDRISLAMVGLRAGADVDVVR
                     AEVERALPRVTVISTAEAIRQVDERLSYFRQLAVILGAVSLTVGFLLVTTLMTVSVNE
                     RLGEIAVMRAVGVRRGRIVAQVVLEGGAIMLVATPLGLALGLVTARYLNSILARFPGL
                     PERIDFFLFQPVAAWTALGLLGVSGILAGIYPSWRSASLGIATTLREEAVG"
     gene            1156..1857
                     /locus_tag="VFN38_17055"
     CDS             1156..1857
                     /locus_tag="VFN38_17055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HET9013536.1"
                     /translation="MTPTIEVRDLVREYRMGGEQVHALRGVSFTVEAREYAAIVGPSG
                     CGKSTLLNLLGVIDRPTSGTVSIAGERVDQLGDARATDFRLRRIGFVFQRFYLMPALT
                     ARENVELPLAEAGMKGAARRERARALLDYVGLARREGHRPSQLSGGEQQRVAIARALA
                     NEPTLLLADEPTGELDARTGAEMIALFHRLNDDGTTIVVVTHDEELARAAKRVIHMRD
                     GCIVGDERASTPRAR"
     gene            1854..2999
                     /locus_tag="VFN38_17060"
     CDS             1854..2999
                     /locus_tag="VFN38_17060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013537.1"
                     /translation="MIGLLATRNLTLNPWRSVLLLLGFSMGVAVMIVLLSIGEALLDQ
                     AKDEKLVGGGAITVLPEGVDVEVLKTGGLGGLFFSIDHARFIHRQLLAAPRMGDVVSA
                     SAPQVEGKLLYLRTRDGRERAVRASADIPSLTAAVGAGPDVAVGRWDDDSLDRRWRSP
                     TDAELRHDIDHFHQPPREVAGDPSWGEWHYFNVISPDRRRWAFVSFIVAGEVGGASDR
                     WGGQVLVTVHEQGRPMRRFTSTVPSARVRYSTTHADLAIGESRVDVQPDGRYRVRARV
                     REDGRGAPLTLDLLVSPSPGAYFPGAALTSGVVSGYVVPALRADASGSLCVAGACTRY
                     DAVQAYHDHNWGVWRGVTWEWGAARAGAYTLLYGRVEPPDSVSEVQP"
     gene            3012..3350
                     /locus_tag="VFN38_17065"
     CDS             3012..3350
                     /locus_tag="VFN38_17065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013538.1"
                     /translation="MDSAGFLAVFRPRTIRYVDARTTVVGGRAIRTPATAEMVDVREG
                     DTLRLSLRVEDASASDTRTALVERGDALAARRLTRPYFVQMKGTATIGGRIRGTPLAG
                     TGAGFFETYR"
     gene            complement(3355..4026)
                     /locus_tag="VFN38_17070"
     CDS             complement(3355..4026)
                     /locus_tag="VFN38_17070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013539.1"
                     /translation="MNDSTDARIERAKDSALGKHDSHPSHLDEAGEAAGGIGGVLAGA
                     AIGSVAGPVGTLIGGIAGAMGGWWSGRAVTEAASKLTKEDDEYYRGSYESSPNRLADR
                     SYDDVRPAYHLGQVASQNPDYANKDWSAVQADLQRGWTADHAKKYGEWNTVSSYAGEG
                     YNRGRQSLGRTAENTFDRAATGAERAANTVADKVDDMKDRVDGNPSSRPGPDATDSSR
                     RLDGR"
     gene            4094..4945
                     /locus_tag="VFN38_17075"
     CDS             4094..4945
                     /locus_tag="VFN38_17075"
                     /inference="COORDINATES: protein motif:HMM:NF014017.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HET9013540.1"
                     /translation="MTLDSVLCPPPIPGMTGHVRIGTQGWNYDAWVGPFYPVGTRPAD
                     YLTVYSRAFDTVEVDSTFYAIPPVRTVRGWYDRTPHGFTFALKLPQEITHERRLRDAD
                     DLANEFYDRARELGEKLGPVLIQLGPDFGPVELPALAKLLPTLPQDIRFSVEFRHRGW
                     IQDGVLALLAEHGVGLTLSDARWIPRKQMLALAARPTAKFLYVRWMGANRDIVDYSRI
                     QIDRTAELEQWAEVLWPLAVKGVSVYGYVNNHFAGHSPQSARELQRALRLTPVDPGSL
                     GEQMSLF"
     gene            4996..>5421
                     /locus_tag="VFN38_17080"
     CDS             4996..>5421
                     /locus_tag="VFN38_17080"
                     /inference="COORDINATES: protein motif:HMM:NF014193.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SURF1 family protein"
                     /protein_id="HET9013541.1"
                     /translation="MSRRTALFCALALIAAAVFVRLGLWQVARLRERQAHNRVVIEQQ
                     RNALVPLSSLPRDSSARYRGASVDGRLDYDHELVLASRTHNGSPGVELITPMRLPGTD
                     TAVLVNRGWVYSPDGGTVDRARWREADSAHVEGYVEVYPP"
BASE COUNT          707 a         1886 c         1953 g          875 t
ORIGIN      
        1 cgtccgccac cgcgcgcgta cgctgctcgc catcctcggc gtggccgtgt ccgccggcat
       61 gctcctggac atggtgatgc tgtcgagcgg catgcgcgaa tcgttccggt cgctcctgct
      121 ctcgcaggga ttccagcttc ggctcgcccc gaagggtacg ctccccttcg acaccgatgc
      181 gacgatccgc gacgccgacg cgctcgtcgc ggcgttgcgc tcgcgccccg acgtggagcg
      241 cgtgagtccc gtgctgggcg ggcagctgca cgtgccgacg gcatctggca cggtgacgtc
      301 ggcggtgctg ggcgtggagc cgctcgtgca gggcgactac gagctcgtgc agggacgcca
      361 tcccgccgcg ccggacgagc tggtggcgaa cgacgccatg ctccgcgcga cgcgcagccg
      421 cctcggcgac acgctcactg ccgcggcggg atacgatgcg cagctgcgcg gcctctcggg
      481 cgtgcgtcgg ctgcgactcg tcggccgggt gcgattcatc tacatggccg ccgagcagcg
      541 gggtgccgcc atgccgctcg ccaccctgcg cgcgatgcag gggcccgacg cccgcgaccg
      601 tatctcgctc gcgatggtgg ggctgcgcgc cggcgccgac gtcgacgtcg tgcgtgccga
      661 ggtggagcgg gcgctgccgc gggtcacggt gatctccacg gcggaggcga tccgccaggt
      721 cgacgaacgg ttgagctact tccggcagct cgccgtcatc ctcggcgcgg tgagcctcac
      781 cgtgggcttt ctgctcgtca ccacgctgat gacagtgtcg gtgaacgagc ggctcggcga
      841 gatcgccgtc atgcgcgcgg tgggcgtgcg ccgcggccgc atcgtcgcgc aagtggtgct
      901 cgagggcgga gcgatcatgc tcgttgcgac gccgctcggc ctggcgctcg gcctcgtgac
      961 ggcacgctat ctcaactcga tcctcgctcg ctttccgggg ctgccggagc ggatcgactt
     1021 cttcctcttt cagccggtcg ccgcctggac cgcgctcggg ctccttggcg tctccggaat
     1081 cctcgcggga atctatccgt cgtggcgcag cgcctccctc ggcatcgcca ccacgctgcg
     1141 cgaggaggcg gtgggatgac gccgacgatc gaggtgcgcg acctggtgcg cgaataccgg
     1201 atggggggcg agcaggtgca cgccctccgc ggcgtgtcct tcaccgtcga ggcgcgggag
     1261 tacgccgcga tcgtgggccc gtccggctgc ggcaagagca cgctcctcaa cctgctcggt
     1321 gtgatcgacc ggccgacgtc gggcaccgtg tccatcgccg gcgagcgggt ggatcagctc
     1381 ggggatgcgc gcgcgaccga tttccggctg cggcgcatcg gcttcgtgtt ccagcgcttc
     1441 tacctcatgc cggcgctcac cgcccgcgag aacgtcgagc tcccgctggc tgaggcgggg
     1501 atgaagggcg ccgcgcggcg ggagcgcgcg cgggccctgc tcgactacgt ggggctggcg
     1561 cgccgcgaag ggcaccggcc gtcgcagctc tcgggtggcg agcagcagcg cgtcgccatc
     1621 gcgagggcgc tggccaacga gcccacgctg ctgctggccg acgagcccac gggcgagctg
     1681 gacgcgcgca ccggcgcgga gatgatcgcg ctgttccatc ggctgaacga cgacggcacg
     1741 acgatcgtcg tcgtgacgca cgacgaggag cttgcgcgcg ccgcgaagcg cgtcatccac
     1801 atgcgcgacg gctgcatcgt cggcgacgag cgcgcctcga ccccgcgcgc gcgatgatcg
     1861 gactgctcgc gacgaggaac ctcacgctga acccgtggcg cagcgtcctg ctcctgctcg
     1921 ggttcagcat gggcgtggcc gtgatgatcg tgctgttgtc catcggcgaa gcgctgctcg
     1981 atcaggcgaa ggacgagaag ctggtgggcg gcggcgcgat caccgtgctg ccggaagggg
     2041 tggacgtcga ggtgctgaag acgggcgggc tcggcggcct gttcttctcg atcgatcacg
     2101 cgcggttcat ccatcggcag ctgctcgccg cgcctcgcat gggcgacgtc gtgtcggcgt
     2161 ccgcgccgca ggtggaggga aagctgctgt acctgcgcac gcgcgacgga cgcgaacgcg
     2221 cggtccgcgc ctcggccgac attccctcac tgaccgccgc cgtcggggcg gggcccgacg
     2281 tggcggtcgg gcggtgggac gacgactcgc tcgatcggcg ctggcgctcc ccgacggatg
     2341 ccgagctgcg gcacgacatc gatcatttcc accagccgcc gcgcgaggtg gccggcgatc
     2401 cgagctgggg ggagtggcac tacttcaatg tcatctcgcc ggatcgccgc cggtgggcat
     2461 tcgtgtcgtt catcgtcgcg ggcgaggtcg ggggcgcgtc ggatcggtgg ggcgggcagg
     2521 tgctggtgac ggtgcatgag cagggacgac caatgcgtcg cttcaccagc acggtgccgt
     2581 cggcgcgtgt gcggtattcg acgacgcacg ccgatctcgc gatcggcgag tcgcgcgtgg
     2641 acgtgcagcc cgacggccgg tatcgcgtgc gcgcccgggt gcgcgaggat ggacggggag
     2701 ctccgctgac gctcgatctc ctcgtctcgc cctcgccggg cgcctacttt ccgggcgccg
     2761 cgctcaccag cggtgtcgtg agcgggtacg tcgtgcccgc gctgcgggcc gacgcgagcg
     2821 gatccctgtg cgtggccggc gcctgcaccc gctacgacgc ggtgcaggcg tatcacgatc
     2881 acaactgggg tgtgtggcgc ggcgtcacgt gggaatgggg cgcggcgcgc gccggcgcgt
     2941 acacgctgct ctatggtcgc gtcgagcccc ccgacagcgt ctcggaggtc cagccgtagt
     3001 tcgtctatct cgtggacagt gccggctttc ttgccgtgtt ccggccgcgc accattcgct
     3061 atgtcgatgc gcggacgacg gtggtcggcg ggcgcgcgat ccgcaccccc gcgaccgcgg
     3121 agatggttga cgtgcgcgaa ggcgacacgc tgcggctctc gctacgtgtc gaggacgcga
     3181 gcgcgagcga cacgcgcacg gcgctggtcg aacggggcga tgccctcgcg gcgcggcggc
     3241 tgacacgtcc gtacttcgtg cagatgaagg gcaccgccac gatcgggggc cggatacgag
     3301 gaaccccgct cgcgggaacg ggagcggggt tcttcgagac ctaccggtag tcgactaccg
     3361 cccgtcgagg cgacggctcg agtcggtggc gtcggggccg gggcgcgagg agggattgcc
     3421 gtccacgcga tccttcatgt cgtccacctt gtcggccacg gtgttcgcgg cgcgctcggc
     3481 gcccgtcgcg gcgcgatcga aggtgttctc cgccgtgcgg ccgagcgact gacgcccgcg
     3541 gttgtagcct tcgccggcgt acgagctgac cgtgttccat tcgccgtact tcttcgcgtg
     3601 gtcggcggtc cagccgcgct gcaggtccgc ctggacggcg ctccagtcct tgttggcgta
     3661 gtccgggttc tgcgacgcga cctgcccgag atgataggcg gggcgcacgt cgtcgtacga
     3721 gcggtcggcg agacggttcg gcgagctctc gtagctgccg cgatagtact cgtcgtcctc
     3781 cttcgtgagc ttggacgccg cttccgtgac cgcacggccg ctccaccatc cacccatcgc
     3841 gccggcgatg ccgccaatga gcgtgccgac cgggcccgcg accgagccga tggccgcccc
     3901 cgcgagcact ccgccgattc cgcccgccgc ttcaccggcc tcgtcgagat ggctcgggtg
     3961 cgagtcgtgc ttgcccagcg cagagtcctt cgcgcgctcg atgcgagcgt ccgtcgaatc
     4021 attcatgcgg tctgccatcg tgatgacctc gtgtgaaggt gattgcgggg tgggaaaggg
     4081 caaaatcggg accgtgacgc ttgacagcgt gctgtgcccg ccgccgattc ccggcatgac
     4141 cggacacgtg cgcatcggca ctcagggctg gaactacgat gcatgggtcg gccccttcta
     4201 tccggtgggg acgcgcccgg ccgactatct cacggtctac tcgcgcgcgt tcgatacggt
     4261 ggaggtggac tccaccttct acgcgatccc gccggtgcgc accgtgcgcg gctggtacga
     4321 tcgcacgccg cacggcttca ccttcgcgct caagctgccg caggagatca cgcacgagcg
     4381 ccgcttgcgc gacgccgacg acctcgcgaa cgagttctac gatcgcgccc gcgagctcgg
     4441 cgagaagctc ggccccgtgc tcatccagct cgggcccgac ttcggtccgg tggagcttcc
     4501 ggcactcgcc aagctgctgc cgacactgcc gcaggacatc cgcttcagcg tcgagttccg
     4561 ccaccgcgga tggatccagg atggcgtgct cgcgctcctc gccgagcacg gcgtgggact
     4621 cacgctgtcc gatgcgcgct ggatcccgcg caagcagatg ctcgccctcg cggcgcgtcc
     4681 caccgcgaag ttcctctacg tgcgctggat gggcgcgaac cgcgacatcg tcgactactc
     4741 gcgcatccag atcgatcgca cggcggagct ggagcagtgg gcggaggtcc tgtggccgct
     4801 cgcggtgaag ggcgtgtcgg tctacggata cgtgaacaac cacttcgccg ggcactcgcc
     4861 gcagagcgcc cgcgagctcc agcgcgcgct ccgcctcacg cccgtggatc cgggatcgct
     4921 gggcgagcag atgtcgctct tctgacacgg atcgccgcgc ggcggtgcct cgccccggcg
     4981 gttaggttcc gcgtcatgtc gcgtcggacc gcactcttct gtgccctcgc cctcatcgcc
     5041 gccgccgtct tcgtgcggct cgggctctgg caggtcgccc gcctgcgcga gcggcaggcg
     5101 cacaaccgcg tcgtgatcga gcagcagcga aacgcgctgg tcccgctgtc gagccttccg
     5161 cgggacagca gtgcccgata tcgcggcgcg tccgtcgacg ggcgcctgga ctacgaccac
     5221 gagctcgtgc tcgcgagccg cacgcacaac ggatcacccg gagtggagct catcacgccg
     5281 atgcgcctcc ccggcaccga taccgcagtg ctggtgaacc gggggtgggt gtattcaccc
     5341 gacggtggca cggtggatcg cgcccgctgg cgcgaagccg acagcgcgca cgtcgagggg
     5401 tacgtcgagg tgtatcctcc c
//
LOCUS       DASSYW010001078         2253 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1577310, whole genome shotgun sequence.
ACCESSION   DASSYW010001078 DASSYW010000000
VERSION     DASSYW010001078.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2253)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2253)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2253
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1577310"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1602
                     /locus_tag="VFN38_17085"
     CDS             <1..1602
                     /locus_tag="VFN38_17085"
                     /inference="COORDINATES: protein motif:HMM:NF013283.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BamA/TamA family outer membrane protein"
                     /protein_id="HET9013542.1"
                     /translation="RIGTFEVTGSRHFSSDDLARFYPFGDRPTTITGAVKGLLRAGRG
                     SDDDLYFDQARWDEATRSVGEAYANEGYIYANVRPVVQRVTAPDGTPTVNLRWEVDER
                     QPAIVNRVEVLGNDITSESCIRNQIFVVPGDVFRREALIRSYQSIGNLGFFETPLPAP
                     DTKTANDNGDVDVIFRVKEKRTGNVNFGASVGQGAGVGGFIGFDQPNLFGLCKRGSLN
                     WQFGQYINDFSLSYTDPFIKESQISGTVTAYHSQTRYYVSNVGRQTRVGGQLQLGFPV
                     MGSRFSRLFVSYGAERVNYGGAENTLASTINCDVVTCSRSTLGLNFDHDTRTGLPFPT
                     DGGNQNISAQVNGFFGGAKYTRYTGEMKHYASLAQFGSSAPGSEPIVLTLGLKARGGA
                     VFGDVGGFYVSQKFSLGGVQYGEPLRGYDEFSITPAGYVSSTSQTTASINSFGSAFFT
                     NTVELGLRFNQQFYLDAFYDAGNIWARPQDFNPTRLFRGAGVGAAVVTPLGPLGLDWG
                     YGFDRVENGVKAPKWQLHFKLGQLF"
     gene            1616..2227
                     /locus_tag="VFN38_17090"
     CDS             1616..2227
                     /locus_tag="VFN38_17090"
                     /inference="COORDINATES: protein motif:HMM:NF015871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpH family outer membrane protein"
                     /protein_id="HET9013543.1"
                     /translation="MRVFLRAASAALAVTILAAGSAAAQSGQKFAYIRSSVLLDQAPG
                     RAEAEAQFDKETGAYRDQIKRMSDSLNAMVAEFEKSQASLSATTRDTRGKAIQAKEAE
                     YQRRTRELEQKAQTRQGELVQPILDRVKQAIEELRIEGGYSFVFNADQGSSIVAMDKN
                     LDITDRVLAKLRSGTVSTAPKPATGAPTAAPSGVTRPQTPPLD"
BASE COUNT          386 a          764 c          757 g          346 t
ORIGIN      
        1 cggatcggca ccttcgaggt gaccggcagc cggcatttct cgagcgacga cctcgcgcgc
       61 ttctatccgt tcggcgaccg cccgacgacg atcaccgggg cggtgaaggg gctgctgcgc
      121 gccgggcgag ggtccgacga cgacctgtac ttcgaccagg cgcgctggga cgaggcgacg
      181 cgcagcgtcg gcgaggcgta cgcgaacgag ggctacatct acgccaacgt gcggccggtc
      241 gtgcagcgcg tcaccgcgcc ggacggcacc cccaccgtga acctgcgctg ggaggtggac
      301 gagcggcagc cggccatcgt gaaccgcgtc gaggtgctcg gcaacgacat cacgtcggag
      361 tcctgcatcc gcaaccagat cttcgtcgtg ccgggtgacg tcttccgccg cgaggcgctg
      421 atccgcagct accagagcat cggcaacctc ggcttcttcg agacgccgct gccggcgccg
      481 gacacgaaga cggcgaacga caacggcgac gtcgacgtca tcttccgcgt gaaggagaag
      541 cgcacgggca acgtgaactt cggcgcgtcg gtggggcagg gcgcgggcgt cggcggcttc
      601 atcgggttcg accagcccaa cctgttcggc ctctgcaagc gcgggtcgct gaactggcag
      661 ttcgggcagt acatcaacga cttcagcctc agctacaccg atccgttcat caaggagtcg
      721 cagatctccg gcacggtcac ggcgtatcac tcccagacgc gctattacgt cagcaacgtc
      781 gggcgccaga cgcgcgtcgg tggccagctg cagctgggat tcccggtgat gggctcccgg
      841 ttctcgcggc tcttcgtgtc gtacggcgcc gagcgcgtga actatggcgg agccgagaac
      901 acgctggcga gcacgatcaa ctgcgacgtc gtcacctgct cccggtcgac gctcgggttg
      961 aacttcgacc acgatacgcg caccggcctg ccgtttccga cggacggcgg caaccagaac
     1021 atctcggcgc aggtcaacgg cttcttcggc ggggccaagt acacgcggta cacgggcgag
     1081 atgaagcact acgcgtcgct ggcgcagttc ggcagcagcg cgcccggcag cgagccgatc
     1141 gtgctcaccc tcggcctgaa ggcgcggggc ggtgcggtgt tcggtgacgt cggcggcttc
     1201 tacgtctcgc agaagttctc gctgggcggc gtccagtacg gcgagccgct ccgcggctac
     1261 gacgagttct cgatcacgcc ggccggctac gtgtccagca cgtcgcagac gacggcctcg
     1321 atcaactcgt tcggcagcgc cttcttcacg aacacagtgg agctcgggct gcggttcaat
     1381 cagcagttct acctcgacgc cttctacgac gccggcaaca tctgggcgcg gccgcaggac
     1441 ttcaatccga cgcggctctt tcgcggcgcg ggcgtcggtg cggccgtggt cacgccgctc
     1501 ggaccgctcg gcctcgattg ggggtacggc ttcgatcgcg tcgagaacgg cgtcaaggca
     1561 cccaagtggc agttgcattt caagctcggt cagctcttct aacctggagt agttcatgcg
     1621 cgtgttcctt cgcgcggcgt ccgccgcgct cgcagtcacg atcctcgccg ccggctcggc
     1681 ggccgcccag tccggccaga agttcgccta catccgctcg tcggtgctgc tggaccaggc
     1741 gccgggccgc gccgaagccg aagcacagtt cgacaaggag acgggcgcct accgcgacca
     1801 gatcaagcgc atgagcgatt cgctcaatgc gatggtcgcc gagttcgaga agagccaggc
     1861 atccctgagc gcgacgacgc gcgacacgcg cggcaaggcg atccaggcca aggaagcgga
     1921 gtaccagcgc cgcacccgcg agctggagca gaaggcccag acgcgtcagg gcgagctcgt
     1981 gcagccgatc ctcgaccgtg tgaagcaggc gatcgaagag ctgcgcatcg aggggggcta
     2041 ctcgttcgtg ttcaacgccg atcagggctc ctcgatcgtc gcgatggaca agaacctgga
     2101 catcacggat cgcgtactgg ccaagctccg cagcggcacg gtgagcaccg ctcccaagcc
     2161 ggcgaccgga gctccgacgg ccgcgccgtc gggggtgacc cgtccgcaga cgcctccgct
     2221 cgactgatcg gtgaccgatc gatcgccaac ccg
//
LOCUS       DASSYW010001079         2012 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_306381, whole genome shotgun sequence.
ACCESSION   DASSYW010001079 DASSYW010000000
VERSION     DASSYW010001079.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2012
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_306381"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            19..>2012
                     /locus_tag="VFN38_17095"
     CDS             19..>2012
                     /locus_tag="VFN38_17095"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HET9013544.1"
                     /translation="MLAKAFLVLADWAGGSTFDATEVDKERGVVIEEWRLGRGAGQRL
                     RDKHLPILLHGSRYAERMPIGKKEVLETFPPSVAADFVHDWYRPELMAVVAVGDFDAA
                     RVETLLRQHFESLPKSPAAVLRPVYPVPAHGDTLFSIATDVEATTSTVSVAAKFPRRE
                     QLTLGSYRQSLVEGLFSSMLNTRLFELTQKADPPFVRAGAGRGGLVRPLETWSLSVTA
                     QNNGLERGLEAALVEVTRAVRHGFTAGELERAKQRLQSAYESAFNERDKTDSAAHASE
                     YVSLFLQQVPAPGVEYEYATLQATLPGIGLDEVNAVGQRFVAEDNVVVQVSAPEKQGV
                     AVPSEEALRQIFAAVAARNIEPYVDTASAAPLVPEPPPAGSIVRRQSLAPLGIELWTL
                     SNGARVFVKRTDFKDDEILFRAWSPGGTSLVSDPEYPVASQAAGFISGSGVGAFSLSE
                     LQKKLAGKQVFVRPLIGALNEGFFGQTRPQDLETLLQLVYLNATQPRRDAEAFQSQKT
                     RFRALLENRAADPANAFGDTLRLVTTKYHPRSYPITAQTLERIELDPALAFYKDRFAD
                     ASDFTFAFVGNVDPQVLAPLVCTYLGGLPRLDRKEKWRDVGITRPKGVVRREFQRGVD
                     PKARTVILFTGNFDWKREERYALNALTEALQIRLREVLRE"
BASE COUNT          328 a          690 c          691 g          303 t
ORIGIN      
        1 cccaccgatg tcgattcggt gctcgccaag gcattcctcg tgctcgccga ctgggcgggg
       61 ggctcgacct tcgacgccac cgaggtcgac aaggagcgcg gcgtcgtcat cgaggagtgg
      121 cgtctcgggc gcggcgccgg ccagcgcctg cgcgacaagc acctgccgat cttgctgcac
      181 ggctcccgct atgccgaacg catgccgatc ggcaagaagg aagtcttgga aacgtttccg
      241 ccgtcggtgg cggcagactt cgtgcacgac tggtaccgcc cggagctgat ggcggtggtg
      301 gccgtgggcg atttcgatgc ggcgcgggtg gaaacactgc tgcgccagca cttcgagagc
      361 ctgcccaagt cgcccgccgc cgtgctgcgt ccggtctacc ccgtgccggc gcacggggac
      421 acgctcttca gcatcgccac ggacgtcgaa gcgaccacca gcaccgtgtc ggtagcggcc
      481 aagttcccgc ggcgcgagca gctgacgctc ggctcctacc ggcagagcct ggtcgagggg
      541 ttgttctcca gcatgctcaa cacgcgcttg ttcgagctga cgcagaaggc ggacccaccc
      601 ttcgtgcgcg ccggtgccgg acgcgggggg ttggtgcgac cgctcgagac gtggtcgttg
      661 agcgtcacgg cgcagaacaa cggcctcgag cgcggcctcg aagcggccct cgtggaggtg
      721 acgcgcgccg tgcgccacgg gttcacggcc ggcgagctgg agcgggccaa gcaacgcctg
      781 cagagcgcct acgaaagtgc gttcaacgag cgcgacaaga ccgattcggc ggcgcacgca
      841 tcggaatacg tgtcgctgtt cttgcagcag gtgccggctc ccggcgtcga gtacgagtac
      901 gcgaccctgc aagcgacgct gcctggcatc gggctcgacg aggtgaacgc ggtcggccag
      961 cgcttcgtgg ccgaggacaa cgtcgtcgtg caggtgagcg cccccgaaaa gcagggcgtc
     1021 gcggtgccga gcgaggaggc gctgcgccag atcttcgccg ccgtcgcggc gcgcaacatc
     1081 gaaccgtacg tcgacaccgc gagcgctgcg ccgctcgtgc cggagccgcc gccggcgggg
     1141 tccatcgtcc ggcgccagag cttggcaccg ctcggcatcg agctgtggac gctgtcgaac
     1201 ggcgcccgcg tcttcgtgaa acgcaccgat ttcaaggacg acgagatcct gttccgcgcc
     1261 tggagcccgg gagggacgtc gctcgtctcc gatccggagt atccggtcgc gagccaggcg
     1321 gcaggcttca tctccggcag cggcgtcggt gccttcagct tgagcgagct gcagaagaag
     1381 ctggcgggca agcaggtgtt cgtgcgcccg ctgatcggcg ccctcaacga ggggtttttc
     1441 ggccagacgc gcccccagga cctggagacg ctgttgcagc tcgtctatct caacgccacc
     1501 caaccacggc gcgacgcgga ggcgttccag agccagaaga cgcgcttccg ggccctgctc
     1561 gagaatcgcg ccgccgaccc ggccaatgcc ttcggggaca cgttgcgact cgtcaccacc
     1621 aaataccatc cacggtcgta cccgatcacg gcgcagacgc tggagcgcat cgagctcgac
     1681 ccggccctcg ccttctacaa ggaccgcttc gccgatgcca gcgacttcac cttcgccttc
     1741 gtcggcaacg tcgatccgca ggtgctcgcc ccgctcgtct gcacctacct cggcggcctg
     1801 ccgcggctcg accgcaagga gaaatggcgc gatgtcggca tcacgcggcc gaagggggtg
     1861 gtgcggcgcg aattccagcg cggcgtcgac ccgaaggcgc gcaccgtgat cctgttcacc
     1921 ggcaacttcg attggaaacg ggaagaacgc tacgcgctga acgcgctgac cgaggcgctg
     1981 cagatccgcc tgcgcgaggt gctgcgcgag ga
//
LOCUS       DASSYW010001080         2286 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_675203, whole genome shotgun sequence.
ACCESSION   DASSYW010001080 DASSYW010000000
VERSION     DASSYW010001080.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2286)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2286)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2286
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_675203"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..521)
                     /locus_tag="VFN38_17100"
     CDS             complement(<1..521)
                     /locus_tag="VFN38_17100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase"
                     /protein_id="HET9013545.1"
                     /translation="MPASTQPDVMDKLVSLSKRRGFIFQSSEIYGGTGSVWDYGPLGV
                     ELKKNLKDAWWKAMVRMRDDVEGLDAAILMHPRTWEASGHVAGFTDPLVDCKTCKGRF
                     RADKLEDARCLQKPSKRPGEAEQCQLTEPRLFNLMFKTFMGPVEESAATVYLRPETAQ
                     GIFVNFLNVQQSTR"
     gene            complement(619..1644)
                     /locus_tag="VFN38_17105"
     CDS             complement(619..1644)
                     /locus_tag="VFN38_17105"
                     /inference="COORDINATES: protein motif:HMM:TIGR04018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YpdA family putative bacillithiol disulfide
                     reductase"
                     /protein_id="HET9013546.1"
                     /translation="MTPPRDLDLLIVGAGPCGLAAAISAQRAGLRARVLDAGSVVSTI
                     TQYPYYVSFFSTAEKLSLGGVPFVVATDKPTRRDGLAYYRAITRHFALDVRQYERVTA
                     IERGDDGFVVHSETLEGERSATRARAVCVATGYFGSPNRLDVPGEELSHVTHVYREGH
                     PAFDQDVVVVGGGNSAAEAALDLWRAGARVTLVHFGPTFDKKIKPWVLLDLQNRMAEG
                     AIGARWNSRVTRIEPGLLTVHGPQGDERLGARFVYVMTGFAPNTDLLRAAGVPIDART
                     GVPRHDPETLETTVPGLFIAGVVVAGYDANKVFIENGRFHGDRIVAKLLGRPAPAPPR
                     LSAELDT"
     gene            complement(1787..>2286)
                     /locus_tag="VFN38_17110"
     CDS             complement(1787..>2286)
                     /locus_tag="VFN38_17110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="adenylosuccinate synthetase"
                     /protein_id="HET9013547.1"
                     /translation="DAVVGLCKAYVTRVGLGPFPTELDDETGERLRKRGAEFGATTGR
                     PRRCGWFDALVVKYATRVNGLSDLAVTKLDVLDTLPKLGICVGYEIDGELHDEFPSDL
                     LALEKVVPKYEWFEGWRQSTAEARALTELPSAARKYLDRIEALVEAPITYVSVGTRRD
                     QIIGL"
BASE COUNT          333 a          833 c          753 g          367 t
ORIGIN      
        1 cgcgtgctct gctgcacgtt gaggaagttc acgaagatcc cctgcgccgt ctccggccgc
       61 aggtagaccg tggccgcgct ctcttccacc ggccccatga aggtcttgaa catgaggttg
      121 aacaggcgcg gctcggtgag ctggcactgc tccgcctcgc ccgggcgctt gctcggcttc
      181 tggaggcagc gcgcgtcctc gagcttgtcg gcgcggaagc ggcccttgca cgtcttgcag
      241 tccaccagcg gatcggtgaa tccggcgacg tgcccgctcg cctcccaggt gcgcggatgc
      301 atgaggatgg cggcgtccag cccttcgacg tcgtcccgca tgcgcaccat cgccttccac
      361 cacgcgtcct tcaggttctt cttgagctcc acgccgagcg gtccataatc ccagaccgaa
      421 cccgtgccgc cgtagatctc ggagctctgg aagatgaagc ccctgcgctt gctgagcgac
      481 acgagcttgt ccatcacgtc gggttgggtg ctggcgggca tggtgcgtcg ttctggtcgg
      541 gatgaggacg gcgccgctgg gtgcggtgcc gggcgtgccg ctcggggtga gcgccacgct
      601 ccgaaccggt gaagctactc aggtatcgag ctccgcgctc aggcgtggcg gggcgggcgc
      661 cggccgcccg aggagcttcg ccacgatccg gtcgccgtga aagcggccgt tttcgatgaa
      721 caccttgttc gcatcgtagc ccgccaccac cacgccggcg atgaacaggc cgggcacggt
      781 cgtctccagt gtctcgggat cgtgcctcgg cacgccggtg cgggcgtcga tcggcacgcc
      841 ggccgcccgc agcaggtcgg tgttgggcgc gaagccggtc atcacgtaca cgaagcgcgc
      901 gccgagccgc tcgtcgccct gcggaccgtg gaccgtcagc agccccggct cgatcctcgt
      961 cacccggctg ttccagcgcg cgccgatcgc cccctccgcc atgcggttct ggaggtccag
     1021 cagcacccac ggcttgatct tcttgtcgaa ggtggggccg aagtgcacga gcgtgacgcg
     1081 ggcgccggcg cgccacaggt ccagcgccgc ttccgccgcc gagttgcccc cgcccacgac
     1141 gacgacgtcc tggtcgaacg ccggatggcc ctcgcggtag acgtgcgtga cgtgggacag
     1201 ctcctcgccg gggacgtcca ggcggttggg ggagccgaag tacccggtcg ccacgcacac
     1261 ggcgcgcgcc cgcgtggccg accgctcacc ttcgagcgtc tccgagtgca cgacgaaccc
     1321 gtcgtcgcct cgctcgatcg ccgtgacgcg ctcgtactgt cgcacgtcga gcgcgaagtg
     1381 ccgcgtgatc gcccgatagt acgccaggcc gtcgcgccgc gtcggcttgt ccgtcgccac
     1441 cacgaacggc acaccgccca gcgagagctt ctcggccgtc gaaaagaagc tgacgtagta
     1501 gggatactgc gtgatcgtgc tcacgaccga ccccgcgtcc agcacgcgcg cccggagccc
     1561 cgcgcgctgc gccgagatcg ccgcggccag gccgcacggc cccgcgccga cgatcagcag
     1621 gtcgagatca cgcggcggcg tcatgctctc atcgatccag gtgctgtcat cccgcacgag
     1681 cgaagcgagt gtcgggatct gctttcacta cgctgcagcc cgatccggtg cacggagggt
     1741 agatcccgac actcgctcgc tgtgctcgct cctgcgggag gacatgtcac aacccgatga
     1801 tctgatcccg acgcgtcccg acggagacgt acgtgatcgg ggcttccacc agcgcctcga
     1861 tccggtcgag atacttgcgc gccgcgctcg gcagctcggt cagcgcgcgg gcctcggcag
     1921 tggactgtcg ccacccctcg aaccactcgt acttcggcac caccttctcc agcgcgagca
     1981 ggtcgctcgg aaactcgtcg tgcagctcgc cgtcgatctc gtaccccacg cagatgccca
     2041 gcttcggcag cgtgtcgagc acgtcgagct tggtgacggc gaggtcgctc aggccgttca
     2101 cgcgcgttgc gtacttcacg acgagcgcgt cgaaccagcc gcagcgccgc ggccggccgg
     2161 tcgtcgcgcc gaactcggcc ccgcgcttgc gcaggcgctc gcccgtctcg tcgtccagct
     2221 cggtgggaaa aggaccgagc ccgacgcgcg tgacgtacgc cttgcacaac cccaccaccg
     2281 catcga
//
LOCUS       DASSYW010001081         2069 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_656374, whole genome shotgun sequence.
ACCESSION   DASSYW010001081 DASSYW010000000
VERSION     DASSYW010001081.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2069)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2069)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2069
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_656374"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..882
                     /locus_tag="VFN38_17115"
     CDS             <1..882
                     /locus_tag="VFN38_17115"
                     /inference="COORDINATES: protein motif:HMM:NF013324.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HET9013548.1"
                     /translation="SLLLVVSIGAAAVVWLVGSRNPYTPAGYVGYLTKGAVFGHSRFA
                     GVQKGPTSAGRTWLLAVANVSVTPYTYTENFTGEDAVLSRDNLKIAFRVHTVWRVDEA
                     RVPLFMERYSTTVTRSSHDTEPDSIVQVAYGNFVREPLKTFARDEVQRRNGLEVKDAL
                     IQIGDAVLARIRQYADGSPFVITSVVVGNVQYPEEVANAVSRKLAATQELQRKDTEIE
                     IERKERTKREVQAQGIANAMEIIRGQLSPMYIQHEAIEAQKQMVNSPNHTVVYIPVGS
                     MGVPLTGTFPAATPAAK"
     gene            complement(892..>2069)
                     /locus_tag="VFN38_17120"
     CDS             complement(892..>2069)
                     /locus_tag="VFN38_17120"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TCR/Tet family MFS transporter"
                     /protein_id="HET9013549.1"
                     /translation="VVLDVLALGIIVPVLPALVVEFLGGDTARAAETYGLFATTWAFM
                     QFVASPVLGSFSDRFGRRPIILLSIAGLGLDYIFMALAPSIGWLFVGRLISGVTSAGF
                     ATAAAYIADVTPPDQRAKSFGLIGAAFGLGFVLGPALGGLLGTYSPRLPFWVSAALCL
                     ANALYGVFVLPESLPPERRSHFSWARANPMGSLRLLRSHPELFGLASVTFLYYVAHEV
                     LPSTFVLYTGYRYGWNSATVGLTLALVGVCTAIVSGGLVGPIVARIGERRAALTGLAF
                     GAAAFALYGLAPTGSLFLAGIPVMALWGLYGPSSQGIMSKRVSPKEQGQLQGAVMGLR
                     GLSGLISPFIFTFTFATFIGARADLHLPGAPFLLASLLLVVAFVLALRVTSRSAAHV"
BASE COUNT          401 a          694 c          726 g          248 t
ORIGIN      
        1 tctctgctgc tcgtcgtgtc gatcggagca gccgcggtcg tctggctggt cggctcgcgc
       61 aacccctaca cgccggcagg ctatgtcggc tatctcacga aaggcgcggt gttcgggcac
      121 tcgcgcttcg ccggggtgca gaaaggcccg acgtcggcgg ggcgcacctg gctgctcgcc
      181 gtcgccaacg tcagcgtcac gccgtacacc tacaccgaga acttcaccgg ggaagacgcg
      241 gtgctgagcc gcgacaacct caagatcgcg ttccgcgtcc acacggtgtg gcgcgtcgac
      301 gaggcgcggg tgccgctgtt catggagcgc tacagcacca ccgtcacgcg ctcgtcgcac
      361 gacacggagc cggactcgat cgtccaggtc gcctacggca acttcgtccg cgagccgctc
      421 aagaccttcg cccgcgacga ggttcagcgc cgcaacgggc tggaggtgaa agacgcgctc
      481 atccagattg gcgacgcggt cctggcgcgc atccgccagt acgccgacgg cagccccttc
      541 gtcatcacca gcgtcgtcgt cggcaacgtg cagtatccgg aggaggttgc caatgcggtg
      601 tcgcgcaagc tcgcggcgac gcaggagctg cagcgcaagg acaccgagat cgagatcgaa
      661 cggaaggagc gcaccaagcg cgaggtgcag gcgcagggca tcgccaacgc gatggagatc
      721 atccgcggcc agctgagccc gatgtacatc cagcacgaag cgatcgaggc gcagaagcag
      781 atggtgaact cgcccaacca caccgtggtc tacatccctg tcggctcgat gggggtgccg
      841 ctgaccggga cgttcccggc ggcgacgccg gcggcgaagt agcgccggcg gtcagacgtg
      901 cgcggcgctg cggctggtga ctcgcagcgc caggacgaag gcgaccacga gcagcagcga
      961 cgcgagcagg aacggcgccc cgggcaggtg cagatcggcg cgggcgccga tgaacgtcgc
     1021 gaacgtgaag gtgaagatga aggggctgat gaggccgctc aggcctcgca gccccatcac
     1081 cgccccctgc agctggccct gttccttcgg cgacacgcgc ttgctcatga tcccctgcga
     1141 cgagggaccg tagagtcccc acagcgccat gaccgggatg ccggcgagga agagcgaacc
     1201 ggttggcgcc aggccgtaga gcgcgaatgc cgccgcaccg aaggcgagac cggtgagcgc
     1261 ggcgcgccgt tcgccgatgc gcgcgacgat cgggccgacg aggccgccgg acacgatcgc
     1321 cgtgcacacg ccgaccagcg cgagcgtcaa gccgacggtt gccgagttcc atccgtagcg
     1381 atagcccgtg tagaggacga aggtgctcgg cagaacctcg tgcgcgacgt aataaaggaa
     1441 cgtcacgctc gccagaccga agagctcggg gtgcgagcgc agaagccgca gggaacccat
     1501 tgggttcgcg cgcgcccacg agaaatgcga ccgccgctcc ggcggcagcg actcgggcag
     1561 gacgaacacg ccgtacagcg cgttcgcgag gcacaacgcg gcggataccc agaacggcag
     1621 gcgcgggctg taggtgccga gcaggccgcc gagcgccggg ccgagcacga acccgagacc
     1681 gaaggcggca ccgatcaagc cgaagctctt cgcacgctgg tcgggcggcg tgacgtcggc
     1741 gatgtacgca gcggccgttg cgaaccccgc cgaggtcact ccggagatca gacgtccgac
     1801 gaacaaccag ccgatcgacg gcgccagcgc catgaagatg tagtcgaggc cgagcccggc
     1861 aatcgacagc aggatgatcg gacggcggcc gaaccggtcc gagaacgatc cgagcaccgg
     1921 cgacgccacg aattgcatga acgcccacgt cgtcgcaaac aggccgtagg tctcggcggc
     1981 gcgcgcggtg tcgccgccga ggaactcgac gacgagcgct ggcagcaccg gcacgatgat
     2041 gccgagcgcc agcacgtcga ggacgacgg
//
LOCUS       DASSYW010001082         3990 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1596016, whole genome shotgun sequence.
ACCESSION   DASSYW010001082 DASSYW010000000
VERSION     DASSYW010001082.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3990)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3990)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3990
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1596016"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1576)
                     /locus_tag="VFN38_17125"
     CDS             complement(<1..1576)
                     /locus_tag="VFN38_17125"
                     /inference="COORDINATES: protein motif:HMM:NF036484.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HET9013550.1"
                     /translation="MKDKLIVRGARQHNLKGFDLEIPRRSFTVVTGPSGSGKSSLAFD
                     TIYAEGQRRYVESLSAYARQFLERMEKPDVDLIDGLSPAVAIEQKNPTKTSRSTVGTA
                     TEIYDYLRLLWARVGHTLCPLCGRELRPDTIQSATDAILALPAGTRFHVAAPVPRSDE
                     VTHEVIVENLRAQGFVRVSVDGVIRHLDELLTAHLDVTFAKELLVVVDRLVVGEEARS
                     RLADALATAFREGDGDAVALFTEPVVSPFDGQRVTRLRFTERFECPNDGTTMPAPSPQ
                     LFSFNSPRGACPQCNGFGAILEYDEALIVPYPERTLRDGAIDPWTKPRYENKRRTLAE
                     FAKKERIGMDVPWRELPAAQRERLLHAGGRGYKGIFPFLRDLEEKRYKQYIRVFLRQY
                     QTAQECPTCHGTKLKPESLQVKVAGRHIAEVSDFPVGTLADWLAALRLSPMEQQIAAH
                     ILNEAQDRVRFLCDVGLNYLSMNRATRTLSGGEAQRIGLANSLGSHLVDTLYVLDEPS
                     IGLHSRDMDRLLRLLLR"
     gene            complement(1774..2037)
                     /locus_tag="VFN38_17130"
     CDS             complement(1774..2037)
                     /locus_tag="VFN38_17130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004946303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HET9013551.1"
                     /translation="MGIIAWIVLGLIAGAIAKALMPGKDPGGIIVTMIIGIVGAFLGG
                     FLGNALTGSGLNGFSLWSIVLAVVGAMLLLWIYRLTTRNRTTL"
     gene            2160..>3990
                     /locus_tag="VFN38_17135"
     CDS             2160..>3990
                     /locus_tag="VFN38_17135"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HET9013552.1"
                     /translation="MAATLSPHSAEEDSTATRRYDRRLVRRLMVYVRPYKRLVAGALL
                     LLMTEGLLQLVGPVLTRRVIDVAVPARDAGMALHAAFLYAASLVLAFGCSYGETMLTA
                     LLGQRVMRDLRLQLFEHAQRLSIAFYDRTPVGRLVTRVTSDVESLNELFTAGVVAGLG
                     DLFTLLAIAVMMIVTDWRLALAAFAVIPLVYLTSHLFQSRVRVAYRDIRTRLARINAF
                     LQERITGIRVVQLFGREAGEATRFATLNRGHLDANLRSITIYALYFPAIEFLTSVALA
                     VLLVAGAHRVGIGTLSVGVVAAFLQLLRRFYQPLQDLADKFNTLQQAMAASERIFLLL
                     DTEPALDAGAAGDGRRLEPGAPVTIAFENVWFHYGGPEAGAPNWVLRGVSFVARPGET
                     VALVGHTGAGKTTIVNLLLRFHEPQRGRVTANGIDIRDLPLKEWRRLIGYVQQDIFLF
                     AADVRANIRLDAPLDDGAVMTAAARVGADRVIGRLPSGLDQVLGERGSSVSVGERQLL
                     SFARALAADPAVLVLDEATSAVDSEAEAEIQRGLAALVRGRTTIAIAHRLSTIVSAEE
                     ILVLHHGEVRERGTHARLRARGGLYERLYRLQAGEGPVRDAHGV"
BASE COUNT          565 a         1344 c         1469 g          612 t
ORIGIN      
        1 ggcggagcag caggcggagc aggcggtcca tgtcgcgcga gtgcagcccg atggacggct
       61 cgtcgaggac gtagagcgtg tccacgaggt gcgagccgag cgagttggcg aggccgatgc
      121 gctgcgcctc gccccccgag agcgtccgcg tggcgcggtt catcgagagg tagttgagcc
      181 ccacgtcgca gaggaaccgg acgcggtcct gcgcctcgtt caggatgtgc gcggcgatct
      241 gctgctccat cggcgacagg cgcagcgcgg cgagccagtc ggcgagggtg ccgacgggga
      301 agtcgctcac ctcggcgatg tggcggccgg cgaccttcac ctgcagcgat tcgggcttga
      361 gcttcgtgcc gtggcaggtg gggcactcct gcgccgtctg gtactgccgc aggaagacgc
      421 ggatgtactg cttgtagcgc ttctcctcga ggtcgcgcag gaaggggaag atgcccttgt
      481 acccccgccc cccggcgtgg aggagccgct cgcgctgcgc cgccggcagc tcccgccacg
      541 ggacgtccat cccgatccgc tccttcttcg cgaactcggc cagcgtccgg cgcttgttct
      601 cgtagcgcgg cttcgtccac gggtcgatcg cgccgtcgcg cagggtgcgc tcggggtagg
      661 gaacgatgag cgcctcgtcg tactcgagga tcgcgccgaa gccgttgcac tgcgggcagg
      721 cgccgcgcgg cgagttgaag gagaagagct gcggggaggg cgccggcatc gtcgtcccgt
      781 cgttggggca ctcgaaccgc tccgtgaagc ggagccgggt gacgcgctgg ccgtcgaagg
      841 gcgacaccac cggctccgtg aacagcgcca cggcgtcgcc gtctccctcg cggaacgccg
      901 tcgcgagcgc gtcggcgagc cggctgcgcg cctcctcgcc gacgacgagg cggtccacca
      961 ccacgaggag ctccttcgcg aaggtgacgt cgaggtgcgc cgtcagcagc tcgtccaggt
     1021 gccggatgac cccgtccacg ctgacgcgca cgaacccctg cgcgcgcagg ttctcgacga
     1081 tcacctcgtg ggtgacctcg tccgagcggg gcaccggcgc ggcgacgtgg aaccgcgtcc
     1141 cggcgggcag cgcgaggatc gcgtcggtgg ccgactggat ggtgtcgggc cggagctcgc
     1201 gcccgcagag gggacagagc gtgtgaccca cgcgcgccca gagcagccgc aggtagtcgt
     1261 agatctcggt ggcggtgccg acggtggagc gcgacgtctt ggtggggttc ttctgctcga
     1321 tcgccacggc gggggagagc ccgtcgatga ggtcgacgtc gggcttctcc atgcgctcca
     1381 ggaactgccg cgcataggcg ctcagcgact cgacgtaccg ccgctgcccc tcggcgtaga
     1441 tggtgtcgaa ggcgagggag gacttgcccg acccggacgg cccggtgacg acggtgaacg
     1501 agcgccgtgg gatctcgagg tcgaacccct tcaggttgtg ctgccgcgcg ccgcggacga
     1561 tgagcttgtc cttcatcgac tgccggtgat tcggaggatc gggtgggatc ggatggtcgc
     1621 gccgctgctc ccgtggccgg gccgacgcgt cgatgacgca atctatcccg aggcgccccg
     1681 aataaacacc gcagcaccgg cctcgacgtg accgagcccc gctcccctcg tacgccggga
     1741 agcggggctc ggtggtgcgt cgtcccgcaa accttacaga gtggtgcggt tccgagtggt
     1801 gaggcggtag atccacagca gcagcatggc gccgacgacg gcgagcacga tgctccacag
     1861 ggagaagccg ttgagccccg acccggtaag ggcgttcccg aggaatccac cgaggaacgc
     1921 gccgacgatt ccgatgatca tggtgacgat gatgccaccc ggatccttcc cgggcatgag
     1981 cgccttcgcg atcgcgccag cgatcaatcc gagtacaatc caagcaatga tacccatggc
     2041 actgcctcca aaggtggaag tggacgacgc ccgcccttac gcaacgcgcg taccagattc
     2101 agccgagggc ggtaccaaga cggactgagg tgcatcggac aggttagaat accatccgca
     2161 tggccgcgac gctctctccg cactccgccg aggaggattc caccgccacg cggcgctacg
     2221 accggcgcct cgtgcgccgg ctgatggtgt acgtgcgccc gtacaagcgg ctcgtcgccg
     2281 gcgcgctgct gctcctgatg acggaggggc tgctgcagct cgtcggcccg gtcctcactc
     2341 ggcgggtgat cgacgtcgcc gttcccgcgc gagatgccgg catggcgctg cacgcggcgt
     2401 tcctctacgc ggcgtcgctg gtgctggcgt tcgggtgctc gtacggggag acgatgctca
     2461 ccgcgctgct gggccagcgg gtgatgcggg acctgcggct ccagctgttc gagcacgcgc
     2521 agcggctctc gatcgccttc tacgaccgca cgccggtggg gcggctggtc acgcgcgtga
     2581 ccagcgacgt ggagtcgctg aacgagctgt tcaccgccgg cgtcgtggcg gggctgggcg
     2641 acctcttcac cctgctcgcg atcgcggtga tgatgatcgt caccgactgg cggctggcgc
     2701 tggcggcctt cgccgtgatc cccctcgtct atctcacgtc gcacctgttc cagtcgcgcg
     2761 tgcgggtggc ctatcgcgac atccgcaccc gcctcgcgcg catcaacgcc ttcctccagg
     2821 agcgcatcac cggcatccgg gtcgtgcagc tgttcgggcg cgaagcgggg gaggccacgc
     2881 ggttcgccac cctgaaccgc gggcatctcg acgccaacct gcgctcgatc acgatctacg
     2941 cgctctactt tccggccatc gagttcctga cctcggtggc gctcgcggtg ctgctcgtgg
     3001 ccggcgcgca ccgggtgggg atcggcacgc tctcggtggg cgtcgtggcc gccttcctcc
     3061 agctgctgcg gcggttctac cagccgctcc aggatctggc ggacaagttc aacaccctcc
     3121 agcaggcgat ggcggcgtcc gagcggatct tcctgctcct cgacaccgag ccggcgctgg
     3181 acgcgggggc cgccggcgac ggccggcggc tggagccggg cgcgccggtg acgatcgcgt
     3241 tcgagaacgt gtggttccac tacggcgggc cggaggccgg tgcgccgaac tgggtgctgc
     3301 ggggcgtgag cttcgtggca cggccgggcg agacggtggc gctggtgggg cacaccggcg
     3361 ccgggaagac gacgatcgtg aatctcctgc tccgcttcca cgagccccag cgtggccggg
     3421 tgacggcgaa cggcatcgac atccgggacc tgccgctgaa ggagtggcgc cgcctcatcg
     3481 gctacgtgca acaggacatc ttcctgttcg cggccgacgt ccgggccaac atccggctgg
     3541 atgcgcccct ggacgacggc gcggtgatga ccgcggcggc gcgggtcggg gccgatcggg
     3601 tgatcgggcg gctcccgtcg gggctcgacc aggtgctggg cgagcggggc tcgtcggtga
     3661 gcgtggggga gcggcagctc ctctcgttcg cccgtgccct tgccgccgac ccggcggtcc
     3721 tcgtgctgga cgaggcgacg agcgccgtgg acagcgaggc ggaggcggag atccagcgcg
     3781 ggctcgcggc gctggtccgc gggcgcacca ccatcgccat cgcgcaccgg ctcagcacca
     3841 tcgtgtcggc ggaggagatc ctcgtgctgc atcatggcga ggtgcgcgag cgggggacgc
     3901 atgcacggct gcgcgcccgc ggagggctct acgaacggct gtaccggctg caggcgggcg
     3961 aggggccggt gcgagatgcg cacggtgtcg
//
LOCUS       DASSYW010001083         2191 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1274990, whole genome shotgun sequence.
ACCESSION   DASSYW010001083 DASSYW010000000
VERSION     DASSYW010001083.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2191)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2191)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2191
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1274990"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..526)
                     /locus_tag="VFN38_17140"
     CDS             complement(<1..526)
                     /locus_tag="VFN38_17140"
                     /inference="COORDINATES: protein motif:HMM:TIGR01891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004180 - carboxypeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HET9013553.1"
                     /translation="MTLLDEAASIADWIVGLRRRIHRHPELMYEEVETSRLVRETLDA
                     LGIPYRYPVAKTGVVATIGSSAGGGSRCIALRADMDALPIHEQADVPFKSEVDGKMHA
                     CGHDCHTAMLLGAARLLKVREAKLPGVVKLIFQPAEEGGAGADRMCEEGALQSPEVEQ
                     IFGLHVWPGLTTGTV"
     gene            complement(526..1773)
                     /locus_tag="VFN38_17145"
     CDS             complement(526..1773)
                     /locus_tag="VFN38_17145"
                     /EC_number="3.5.4.25"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: protein motif:HMM:NF006803.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003935 - GTP cyclohydrolase II activity
                     [Evidence IEA];
                     GO_function: GO:0008686 -
                     3,4-dihydroxy-2-butanone-4-phosphate synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP
                     cyclohydrolase II"
                     /protein_id="HET9013554.1"
                     /translation="MTKSQMRIAKGARKKGPFASIDQAIEAIQAGRMIVVVDDEDREN
                     EGDLTMAASKVTPEAINFMARHGRGLVCLAMTPERLDHLEIPLEVSDNSSRRDTAMCV
                     SIDARDRTTTGISAADRAETVRVALDAASSPRDLSRPGHVFPLRARSGGVLVRAGHTE
                     AAVDLSRIAGLDPSGVICEIMNDDGTMSRVPELAKFARKHGLLMITIADLIQYRMRTE
                     RLVKRAASANLPTEFGAFHLFAYENNIDNQAHVALVRGDIGDGKDVLVRVHSKCLTGD
                     VFHSARCDCGPQLDAALTRIADEGRGVLLYLNQEGRGIGLVNKVRAYALQDQGLDTVE
                     ANERLGFKADQRDYGIGAQILSDLGVKTMRLLTNNPRKFVGLQGYGLSVSEAVPLEIP
                     ASDHTRRYLKTKKDKLGHKLSSV"
     gene            complement(1770..>2191)
                     /locus_tag="VFN38_17150"
     CDS             complement(1770..>2191)
                     /locus_tag="VFN38_17150"
                     /EC_number="2.5.1.9"
                     /inference="COORDINATES: protein motif:HMM:NF006767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HET9013555.1"
                     /translation="DIGPETARVTTLGSLRAGHRVNLERSMRADSRFGGHLVQGHVDA
                     TGQVLAIRPDGDSRWIDVAFPEPLSPLFVPKGSVAMNGVSLTVATLDEARFSVMIIPF
                     TWDHTNLGGLRPGGQVNLECDMVGKYVARAAQWYKRP"
BASE COUNT          327 a          770 c          716 g          378 t
ORIGIN      
        1 ccaccgttcc ggtcgtgagg ccgggccaca catgcaggcc gaagatctgc tcgacctcgg
       61 gtgactgcag ggcgccctcc tcgcacatgc ggtccgcgcc ggcgccgcct tcctcggccg
      121 gctgaaaaat cagtttcacg acgccgggca gtttcgcctc tctcaccttc agcagacgcg
      181 cggcaccgag cagcatcgcc gtgtggcagt cgtggccgca cgcgtgcatc ttgccgtcga
      241 cctcgctctt gaacggcacg tcggcctgct cgtggatcgg cagcgcgtcc atgtcggcgc
      301 gcagcgcgat gcaacgcgat ccgccgccag cactgctgcc aattgtcgcc acgactccgg
      361 tcttcgcgac cggatatcga taggggatgc cgagggcgtc gagtgtctcg cgcacgaggc
      421 ggctcgtttc cacctcctcg tacatcaact cgggatggcg atgaatccgc cggcgcaggc
      481 cgacaatcca gtcggcgatc gacgccgcct cgtcgaggag ggtcatcaca cggacgacag
      541 tttgtgtccg agcttgtctt tcttcgtctt caggtagcgg cgcgtgtgat cgctggcggg
      601 gatctcgagc ggcaccgcct cggagaccga caggccgtaa ccctggagcc ctacgaactt
      661 gcgcgggttg ttggtgagca gccgcatcgt cttgacgccg aggtcgctca gaatctgcgc
      721 cccgatgccg tagtcgcgct gatccgcctt gaacccgagg cgctcgttcg cctccaccgt
      781 gtcgagcccc tggtcctgca gcgcataggc gcggaccttg ttcaccagcc cgatgccgcg
      841 cccttcctgg ttcaggtaga gcagcacgcc gcgcccttcg tcggcaatcc gcgtcagcgc
      901 cgcgtcgagc tgcggcccgc agtcgcaccg cgctgaatga aagacgtcgc cggtgaggca
      961 cttcgagtgc acgcggacca gcacgtcctt gccgtcgccg atgtcgccgc gcaccagcgc
     1021 cacgtgcgcc tggttgtcga tgttgttctc gtaggcaaag agatggaagg cgccgaactc
     1081 ggtcggcagg ttcgcgctgg cggcgcgctt cacgagccgc tcggtgcgca tccggtactg
     1141 gatcagatcc gcgatcgtga tcatcagcag gccgtgcttg cgcgcgaact tggcgagctc
     1201 cggcacccgg gacatggtgc cgtcgtcgtt catgatttca cagatcacac cggacgggtc
     1261 gaggccggcg atccgcgaca ggtccaccgc ggcctccgtg tgaccggccc gcacgagcac
     1321 gccgccgctg cgcgcgcgca gggggaacac gtgaccgggt cgcgacagat cgcgcggcga
     1381 gctggcggcg tcgagcgcca cccgcacggt ttcggcgcgg tccgccgcgg agatgccggt
     1441 ggtggtgcga tcgcgtgcgt cgatcgacac gcacatggcg gtgtcgcgcc gcgacgagtt
     1501 gtcgctcacc tcgagcggaa tctccagatg gtcgagccgc tccggagtca tcgccaggca
     1561 gacgaggccg cggccgtggc gcgccatgaa gttgatcgcc tcgggggtga ccttcgacgc
     1621 cgccatcgtg aggtcgccct cgttctcgcg atcctcgtcg tcgacgacca cgatcatccg
     1681 gccggcctgg atcgcctcga tcgcctgatc gatcgacgcg aacggcccct tcttgcgggc
     1741 ccctttggcg atgcgcatct gcgacttggt catggtcgtt tgtaccactg ggccgcgcgg
     1801 gccacgtatt tcccaaccat atcgcactcg aggttcacct gcccgcccgg ccgcaggccg
     1861 cccaggttgg tgtggtccca ggtgaacggg atgatcatca cggaaaaccg cgcctcgtcc
     1921 agcgtggcga ccgtcaggct gacgccgttc atcgccaccg accccttcgg cacgaacagc
     1981 ggcgacagcg gttctggaaa cgcgacgtcg atccagcgcg agtccccgtc ggggcggatg
     2041 gccagcacct gcccggtggc gtccacgtgt ccctgcacga ggtgtccgcc aaagcggctg
     2101 tcggcgcgca tcgaccgctc gaggttcacc cgatgccccg cccgcagaga acccagtgtc
     2161 gtcacccgcg ccgtttcggg accgatgtcc g
//
LOCUS       DASSYW010001084         2229 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_951442, whole genome shotgun sequence.
ACCESSION   DASSYW010001084 DASSYW010000000
VERSION     DASSYW010001084.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2229)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2229)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2229
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_951442"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..566)
                     /locus_tag="VFN38_17155"
     CDS             complement(<1..566)
                     /locus_tag="VFN38_17155"
                     /inference="COORDINATES: protein motif:HMM:NF013086.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HET9013556.1"
                     /translation="MSHAFDAVVIGAGLNGLVASAALGRAGLRVLLLERGPATGGEAR
                     AMQFAEGYRASPLSLDAGWLPPVVARGLGLRPELVASETSAAVLLGNGERLAVARDAG
                     RAAQAIAAHSARDAERWPAFVTKLGKIAGFLETLYQLPPPDIDTSSLRELFPLVGVAR
                     RMRGLGREDMTDLLRILPMAVQELIDDT"
     gene            complement(563..1558)
                     /locus_tag="VFN38_17160"
     CDS             complement(563..1558)
                     /locus_tag="VFN38_17160"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HET9013557.1"
                     /translation="MRVLVIGGTLFIGRAMVEKLLARGDEVAIMHRGQGTPWGDRVRE
                     IRCDRNDVNAVRAAFSGEAFDEVYDNVYDWQRGTSAGQVAAAARAASHPGLRRYVFTS
                     SIAVYGDGLDHLEGDPLVPADFPNRYAAEKAESERALFNLQRTEGVPVTTLRPSFVYG
                     QHNPFQREAWFWDRILADRPVIVPGDGTRPQQWVHAAEVAEVALRAAARPKSAGSSYS
                     LGNYPPVTQRELIELLARVAERKAQIVLVPREQIEAAGGVMMGEGPLYFGEYLDPPPI
                     TVQGETLTPDLGITLGSLEDGFRSTFDWYRRQTRPQPDFAWEDRLIARSADRLIV"
     gene            complement(1558..>2229)
                     /locus_tag="VFN38_17165"
     CDS             complement(1558..>2229)
                     /locus_tag="VFN38_17165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HET9013558.1"
                     /translation="VDTKDLPGDLVEGVRRYKFRGSSGKVNLALDGLPDLTCLPGNGP
                     HLRGAISISPSLAYLERAYDDAKYGEFSRHPYMDIVIPSMIDPQMAPPGKHVMSIFVQ
                     YAPYHLNGGWTDAKREAFGDAVVDTLAQYAPNIKQLILHRQVLTPLDIERITGLSEGN
                     IFQGELALHQLFFLRPVPEWAKYRTPIRGYWQCGAGTHPGGGIMGASGRLAALEMLSH
                     TRAGS"
BASE COUNT          373 a          777 c          739 g          340 t
ORIGIN      
        1 aaggtgtcgt cgatcagctc ctgcaccgcc atcgggagga tccggaggag gtcggtcatg
       61 tcctcgcgac cgagcccacg catcctgcgc gcgacgccga ccagcgggaa aagctcgcgg
      121 agcgaagagg tatcgatatc cggcggcggg agctgataca gcgtctcgag gaatcccgcg
      181 atcttgccca gcttggtgac gaacgcgggc cagcgttccg cgtcgcgcgc cgagtgcgca
      241 gcaatcgcct gcgccgcgcg ccccgcatcc cgcgccaccg cgagacgctc cccattccca
      301 aggaggaccg ccgcgctggt ctccgacgcg accagctcgg ggcggagtcc gagtccgcgc
      361 gcgacgaccg gtggaagcca acccgcgtcc aacgagagcg gcgacgcccg gtagccctcg
      421 gcgaattgca tggcgcgcgc ctcgccgccg gtcgccgggc cgcgctcgag cagcaggacg
      481 cgaagcccag cccggcccag ggccgcgctc gcaaccaggc cgttgaggcc ggcgccgatg
      541 accaccgcat cgaaggcgtg gctcatacga tcagccgatc cgccgatctg gcgatcaggc
      601 gatcttccca cgcgaagtcc ggctgcggcc gggtctggcg acgataccag tcgaaggtcg
      661 accggaatcc atcttcgagg gatcccaacg tgatgccgag gtccggggtg agcgtctccc
      721 cctgcacggt gatcggcggc ggatcgagat attcgccgaa gtaaagcggg ccttcaccca
      781 tcatcacgcc acccgcggcc tcgatctgct cccgcggcac caggacgatc tgtgccttcc
      841 gctcggcgac tcgcgccagc agctcgatga gctcgcgctg ggtgacaggc ggataattac
      901 ccaggctgta cgacgagcct gccgacttgg ggcgcgccgc ggcgcgaagc gccacttccg
      961 cgacctcagc cgcgtggacc cactgctgcg gccgggtccc gtcgccggga acgatcaccg
     1021 gccggtcagc caggatgcgg tcccagaacc acgcctcccg ctggaaggga ttgtgctgcc
     1081 cgtacacgaa ggagggccgc agggtggtga ccggaactcc ctcggtgcgc tgcaggttga
     1141 agagcgcgcg ttcactctcc gccttttccg ccgcgtaccg gttgggaaaa tccgctggta
     1201 ccagcggatc tccttcgagg tgatccagtc catccccgta gaccgcgatg ctcgaggtaa
     1261 agacgtagcg tcgcagtccc gggtgcgatg cagcgcgcgc ggccgcggca acctgaccgg
     1321 cgctggtgcc gcgctgccag tcgtacacgt tgtcgtagac ctcgtcgaac gcctcaccgg
     1381 agaacgccgc gcgcaccgcg ttgacgtcgt tccggtcgca gcggatctcg cggacccggt
     1441 cgccccaggg agtgccctgg ccgcgatgca tgatggcgac ctcatcgccg cgcgcgagca
     1501 gcttctccac catcgcgcgt ccgatgaaaa gggtgccgcc gatcacgagg acgcgcatca
     1561 ggaccccgcc ctggtgtggc tcagcatctc gagcgccgcc agccgacccg aggcgcccat
     1621 gatgccaccg cccggatgcg tcccggcgcc gcactgccag tagccacgaa tcggtgtgcg
     1681 gtacttggcc cactcgggaa ccgggcggag gaagaagagc tgatgcagcg ccagctctcc
     1741 ctgaaaaatg ttcccctcgg aaagcccggt aatccgctcg atgtcgagcg gcgtcagcac
     1801 ctgccgatgc aggatcagct gcttgatgtt gggggcgtac tgcgccagcg tgtccaccac
     1861 tgcgtcgccg aacgcttcac gcttcgcgtc ggtccatccg ccattcaggt ggtagggcgc
     1921 gtactgcacg aagatgctca tcacgtgctt gcccggcggc gccatctggg gatcgatcat
     1981 cgacgggatg acgatgtcca tatatggatg gcgcgagaac tcaccgtact tggcatcgtc
     2041 gtacgcgcgc tccaggtacg ccaggctcgg gctgatcgag atggcgcccc ggaggtgcgg
     2101 cccgtttccg ggaaggcagg taaggtccgg caggccgtcg agcgccaggt tcaccttgcc
     2161 cgacgagccg cggaacttgt agcgtcggac cccttcgacc aggtcaccgg gcaggtcttt
     2221 ggtatcgac
//
LOCUS       DASSYW010001085         2426 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_713381, whole genome shotgun sequence.
ACCESSION   DASSYW010001085 DASSYW010000000
VERSION     DASSYW010001085.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2426)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2426)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2426
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_713381"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            96..1355
                     /locus_tag="VFN38_17170"
     CDS             96..1355
                     /locus_tag="VFN38_17170"
                     /inference="COORDINATES: protein motif:HMM:NF012760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIIA family hydrolase"
                     /protein_id="HET9013559.1"
                     /translation="MADGGRPQAALLDRDGTIIVDHHYLNDPANVELLPGAAEAIRRL
                     AAAGIPSIVCTNQSGIARGTISLEQYRAVRRRMEELLAAEGATLLDTFSCPHHPDITG
                     PCDCRKPATGLYERAAALHGLDLSRCFYAGDRYRDVAACTVFRGRGAFVESRVSLPED
                     RERAVAEGMSVASSLLDAVRDLLGAPHARRARIAVLASGGGSNLQALLDYFAALGERR
                     AGDVVLVASNRADAGALARAGAAGIRTAVIPGDGAGLEALLDAHAIDLVVLAGYLKFV
                     PVAVTRRYAGRIVNVHPALLPEFGGPGMYGARVHRAVLGARAAASGPTVHFVDEVYDH
                     GAVIAQWRVPVHPTDDEQALAARVLRAEHLLLPRVVQAVAAGEVRLTSDGRVDPPFVL
                     DPATLATLDRELDDGILAGELQRPRPR"
     gene            1453..>2426
                     /gene="purH"
                     /locus_tag="VFN38_17175"
     CDS             1453..>2426
                     /gene="purH"
                     /locus_tag="VFN38_17175"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0003937 - IMP cyclohydrolase activity
                     [Evidence IEA];
                     GO_function: GO:0004643 -
                     phosphoribosylaminoimidazolecarboxamide formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HET9013560.1"
                     /translation="MPRALLSVSDKSGLLDFARGLHALGWELLSTGGTARALREAGVP
                     VRDVSEVTRFPEMLDGRVKTLHPAVHGGLLARRDLPEHMQAIEEQGIAPIDLVAVNLY
                     PFRQTAARAGAAPEEVIEQIDIGGPSMLRSAAKNFAAVTTVVDPVDYPRVLAMLADTR
                     DDVGFRRALAGKVFEHTAAYDAAIAAWFAGQREELFPERITLSLERGQSLRYGENPGQ
                     AAAFYVERAGAGLAGLTQRGGKELSFNNLLDLEGALLATEPFGAEPCCAIVKHTTPCG
                     LAIGTDALDAYRKALACDPVSAFGSVISFTVPLDDAAAEAVSSLFVECV"
BASE COUNT          294 a          910 c          882 g          340 t
ORIGIN      
        1 ggtggggcgg gtgcaggacg gccggctcct gctcgacctg cgcgccgtac cggacgacga
       61 cgtgccggcg ctggcctcgg ccgtggtggc ggcgcgtggc tgacggcggc cgtccgcagg
      121 ccgccctgct cgaccgggac ggcacgatca tcgtggacca ccactacctg aacgatcccg
      181 cgaacgtgga gctcctgccg ggcgcggcgg aggcgatccg gcggctcgcc gcggcgggca
      241 tcccctccat cgtctgcacg aaccagtcgg ggatcgcgcg cggaacgatc tcgctggagc
      301 agtaccgcgc cgtgcgccgg cggatggaag agctgctcgc cgccgaaggg gccacgctgc
      361 tcgacacctt cagctgcccg caccaccccg acatcaccgg cccgtgcgac tgccgcaagc
      421 cggccaccgg actgtacgag cgggccgccg cgctgcacgg gctcgacctc tcccgctgct
      481 tctacgccgg cgaccgctac cgcgacgtcg cggcctgcac cgtgtttcgc gggcgcggcg
      541 ccttcgtgga gtcgcgtgtc agcctgcccg aggaccgcga gcgggcggtg gcggagggaa
      601 tgtcggtggc gtcgtcgctg ctggacgcgg tgcgcgacct gctcggcgcg cctcacgcca
      661 ggcgcgcgcg catcgcggtg ctcgccagcg gcggcggctc caacctccag gcgctgctcg
      721 actacttcgc cgcgctgggc gagcgccgcg ccggcgacgt cgtcctcgtc gcgtccaacc
      781 gcgccgacgc gggggcgctc gcccgcgccg gcgccgccgg gatccggacg gccgtcatcc
      841 cgggcgacgg ggccgggctg gaggcgctgc tcgacgcgca cgccatcgac ctcgtggtgc
      901 tcgccggcta cctgaagttc gtgccggtcg cggtcacgcg gcgctacgcc ggccgcatcg
      961 tgaacgtgca tcccgcgctg ctgccggagt tcggtggtcc gggcatgtac ggcgcacgcg
     1021 tccaccgcgc cgtgctcggc gcgcgcgcgg ccgcgagcgg ccccaccgtg cacttcgtgg
     1081 acgaggtgta cgaccacggc gccgtgatcg cgcagtggcg ggtgcccgtc catccgacgg
     1141 acgacgagca ggcgctcgcg gcgcgcgtgc tgcgggccga gcacctgctc ctgccgcggg
     1201 tggtccaggc cgtggcggcg ggagaggtgc ggctcacgag cgacggccgc gtggatcctc
     1261 cgttcgtgct cgatcccgcg accctcgcca ccctcgaccg cgagctcgac gacggcatcc
     1321 tcgccggcga gctccagcgg ccgcggccgc gctgacctcc gttcaccgat caccgctcac
     1381 cgttcacggt tcgccattca ccgttcgccg ttcaccgatc accgctcacc gctcaccgtt
     1441 cacgtttcat aaatgccccg cgccctgctc tccgtctccg acaagtccgg cctgctcgac
     1501 ttcgcccgcg ggctccacgc tctcgggtgg gagctcctct ccacgggcgg caccgcgcgc
     1561 gccctgcgcg aggccggggt cccggtgcgc gacgtgagcg aggtgacgcg ctttcccgag
     1621 atgctggacg gacgcgtgaa gacgctgcac cccgcggtgc acggcgggct gctcgcgcgg
     1681 cgcgacctgc ccgagcacat gcaggcgatc gaggagcagg gcatcgcgcc catcgacctc
     1741 gtggcggtga acctctatcc ctttcgccag acggccgccc gcgccggcgc ggccccggag
     1801 gaggtgatcg agcagatcga catcggcggg ccgagcatgc tgcgctcggc ggccaagaac
     1861 ttcgccgcgg tcacgacggt ggtggacccg gtggattacc cgcgcgtgct ggcgatgctc
     1921 gccgatacga gggacgacgt cggcttccgg agggcgcttg ccggcaaggt gttcgagcac
     1981 acggcggcgt acgacgcggc gatcgccgcc tggttcgccg gccagcgcga ggagctgttc
     2041 cccgagcgga tcaccctgtc gctggaacgg gggcagtcgc tgcgctacgg cgagaacccg
     2101 ggccaggccg cggcgttcta cgtcgagcgg gcgggcgcgg ggctggcggg gctcacccag
     2161 cgcggcggca aggagctctc cttcaacaac ctgctcgacc tcgagggggc gctgctcgcc
     2221 accgagccgt tcggcgcgga gccgtgctgc gccatcgtca agcacaccac gccgtgcggc
     2281 ctcgccatcg gcaccgatgc gctggacgcg taccgcaagg cgctcgcgtg cgacccggtg
     2341 tcggcattcg gctccgtcat ctcgttcacc gtgccgcttg acgacgcggc ggcggaagcg
     2401 gtgtcgagcc tgttcgtgga gtgcgt
//
LOCUS       DASSYW010001086         2076 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_556529, whole genome shotgun sequence.
ACCESSION   DASSYW010001086 DASSYW010000000
VERSION     DASSYW010001086.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2076)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2076)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2076
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_556529"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..276
                     /locus_tag="VFN38_17180"
     CDS             <1..276
                     /locus_tag="VFN38_17180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013561.1"
                     /translation="TKPVFVELSYIALGRSVVRAKARTRFGIRVTTDARSFTWRFARG
                     KGTGEPGLLVLRAPRAGRYTLYVQANGHADKAAVIVTPRTKSRRSAR"
     gene            336..1769
                     /locus_tag="VFN38_17185"
     CDS             336..1769
                     /locus_tag="VFN38_17185"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HET9013562.1"
                     /translation="MKVLRLLIPILAACALLAVIGARAGTALYERIQTRDLRGSAADE
                     FLPDANPADRRDARPPTVVRRPKPAAKPKPKAKPKPRRPGRLDGPEWWPTYGYDDART
                     HVSVSYGHRPPFKKAWRFRAAHYLEFPPAVAYGRLYVPNQRGRFFAINSATGKIIWQK
                     RFRRCIAASPVVSDGVVYQALMHRLPCPKWARGAPGYVTAMDARTGRELWTFRAGVVE
                     SSPVLVDGRLYFGSWDHHLYCVRARDGKLLWRFRADDELNSAPAYAAGRIYIGSDGGK
                     IYAVDARTGRQRWSNASYSRQYFYATPTVAYGRVFIGNTDGTVYAYGATTGRLLWARR
                     VGTYVYTAAAVWKKRVLVGTYDGHVLALDAATGDVRWRVPAPAAVHGAPTVLDGLVYF
                     ASCGTCGSRGSRYAKRGPFETFALDARNGRRVWSFPDGRYSPIVADRKRVYLVGSTSV
                     YALVERAKRSPAASTTARIRKTSGHKR"
     gene            complement(1685..>2076)
                     /locus_tag="VFN38_17190"
     CDS             complement(1685..>2076)
                     /locus_tag="VFN38_17190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013563.1"
                     /translation="VAAGFLPFLIADAGALWDDTIAYGTGTYRIIGYGLAGLLVGAGA
                     VERDGDYPFALLALVVWVPATAWLLLGLVRSRASWQAAGGVAVSLFLLLWLSRVLQSS
                     YLLWPLVFLILAVVLAAGERFARSTSA"
BASE COUNT          297 a          793 c          719 g          267 t
ORIGIN      
        1 acgaagcccg tcttcgtcga gctcagctac atcgcgctcg gccgctcggt cgtccgcgcc
       61 aaggcgagga cgcgcttcgg gatccgcgtc acgaccgacg cgcgcagctt cacgtggcgc
      121 ttcgcgcgcg ggaagggcac cggcgagccg ggcctgctcg ttctccgtgc gccgcgcgcc
      181 gggcgctaca cgctctacgt gcaggcgaac ggccacgccg acaaggcggc ggtgatcgtc
      241 actccccgca ccaagtcccg ccggagcgcc cgctagcctg aatcgatcgt tgggtccgcg
      301 cgtcatccgc gctttcctct ctctgccgcc gcccggtgaa agtcctgcga ctcctcattc
      361 cgatcctcgc tgcctgcgcg ctgctggccg tcatcggcgc gcgcgcgggc acggcgctct
      421 acgagcggat ccagacccgc gacctgcgcg gctcggcggc ggacgagttc ctgcccgacg
      481 cgaacccggc cgaccggcgc gacgcgcgac cgcccacggt cgtgaggagg ccgaagccgg
      541 ccgcgaagcc caagcccaag gcgaagccga agccgcgccg gccgggccgt ctcgacgggc
      601 cggagtggtg gcccacctac ggctacgacg acgcccgcac ccacgtctcc gtctcgtacg
      661 gccaccggcc gcccttcaag aaggcctggc gcttccgcgc ggcgcactat ctcgagttcc
      721 cgcccgcggt cgcgtacggc cgcctctacg tcccgaacca gcgcggccgc ttcttcgcga
      781 tcaactcggc gacggggaag atcatctggc agaagcgctt ccgccgctgc atcgccgcct
      841 cgccggtcgt gagcgacggc gtcgtctacc aggcgctgat gcatcgcctg ccgtgcccga
      901 agtgggcgcg cggtgcaccc ggctacgtga cggcgatgga cgcgcgcacc ggccgcgagc
      961 tctggacgtt ccgcgccggg gtcgtcgagt cgtcgcccgt gctcgtcgac ggccggctct
     1021 acttcggctc gtgggaccac cacctctact gcgtccgcgc ccgcgacggg aagctgctgt
     1081 ggcgcttccg ggccgacgac gagctgaaca gcgcgccggc ctacgcggcc gggcggatct
     1141 acatcggctc ggacggcggc aagatctacg cggtcgacgc ccgcaccggc cgccagcgct
     1201 ggagcaacgc gtcgtattcg cgccagtact tctacgcgac gccgaccgtc gcctacggcc
     1261 gcgtcttcat cggcaacacg gacggcacgg tctacgccta cggggccacg accggccgcc
     1321 tgctctgggc gcggcgggtc ggcacgtacg tctacacggc agcggccgtc tggaagaagc
     1381 gcgtcctcgt cggcacgtac gacggtcacg tgctggcgct cgacgcggcg acgggcgacg
     1441 tgcgctggcg cgtcccggcc cccgcggcgg tgcacggcgc gccgacggtg ctcgacgggc
     1501 tcgtctactt cgccagctgc ggcacctgcg gctcgcgcgg atcgcggtac gcgaagcgcg
     1561 gcccgttcga gacgttcgcc ctcgacgcgc gcaacgggcg ccgcgtctgg tcgttcccgg
     1621 acggccgcta ctcgccgatc gtggcggacc gcaagcgcgt ctacctcgtc gggtcgacca
     1681 gcgtctacgc gctcgtcgag cgggcgaagc gctcaccagc ggcgagcacg accgcgagga
     1741 tcaggaagac gagcggccac aagaggtagc tcgactgcag cacgcggctc agccagagca
     1801 gcaggaagag cgagaccgcc accccgccgg ccgcctgcca cgaggcgcgt gagcggacga
     1861 gccccagcaa cagccaggcc gtcgcaggca cccagacgac gagcgcgagc agcgcgaacg
     1921 ggtagtcgcc gtcgcgctcc accgcgcccg cgccgacgag cagcccggcg agcccgtagc
     1981 cgatgatccg gtacgtgccg gtgccgtagg cgatcgtgtc gtcccatagc gcgcccgcgt
     2041 cggcgatcag gaacgggagg aagccggccg caacga
//
LOCUS       DASSYW010001087         2138 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_339362, whole genome shotgun sequence.
ACCESSION   DASSYW010001087 DASSYW010000000
VERSION     DASSYW010001087.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2138)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2138)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2138
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_339362"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..629
                     /locus_tag="VFN38_17195"
     CDS             <1..629
                     /locus_tag="VFN38_17195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SecY family transport protein"
                     /protein_id="HET9013564.1"
                     /translation="ARRILIQIPQRTMARGRMREAARSFIPLRINTAGVMPIVFAQSI
                     IVVPGAFAQFFPQYEFTRRLADIFAPDTFWFLASQAILILFFTYFYTSIIFNPIDLAE
                     NLKKQGGFIPGVKPGARTAEYIDQVVSRITLPGAIFLTLIALLPVVISTAINVPFTFG
                     GTSLLIVVGVALDTLAQMQQHLLLRKYDGFMKKGRLKARGSQTTGSGF"
     gene            681..1316
                     /locus_tag="VFN38_17200"
     CDS             681..1316
                     /locus_tag="VFN38_17200"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: protein motif:HMM:NF001381.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0019205 - nucleobase-containing compound
                     kinase activity [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HET9013565.1"
                     /translation="MIIVLFGKPGAGKGTQAPLLAAALGVPTLATGDELRAAIKAGTA
                     LGREAKSYMDRGDLVPDAVILGIIKQALSEPRTAGGVLLDGVVRTVPQADGLAKATAE
                     LGKQVDAVLCFDIDDDEIVRRLAGRTVCESCQTPFTGREPGTACDKCGGTLVRRKDDE
                     PEAIRNRLAVYDRQTRPVLDWYKQHGTKVAVIDAVGSVQDVTARALGVLAS"
     gene            1330..2082
                     /gene="map"
                     /locus_tag="VFN38_17205"
     CDS             1330..2082
                     /gene="map"
                     /locus_tag="VFN38_17205"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HET9013566.1"
                     /translation="MIQLKSAREIELMAEGGRILAATVQHVRDAVRPGISTLELDAVA
                     EQFIRSHPGATPAFKGLYGFTGSICASINEEIVHGIPSKKRVLAEGDIISIDVGVAYR
                     GYFTDSATTVPVGAVDAETARLLEVTERSLAAGIAAAIPGNHLGDIGAAVQQVVEGAG
                     FSVVRDLVGHGIGVEFHEEPQVPNYGKPKRGLKLVPGLTIAIEPMVNIGSPMTRTLPD
                     KWTIVTVDGSRSAHFEHTVAITTDGNRVLTAA"
BASE COUNT          331 a          753 c          745 g          309 t
ORIGIN      
        1 cggcgcggcg catcctgatc cagatcccgc agcgcaccat ggcgcgaggg cgaatgcgag
       61 aggcggcgcg gagcttcatc ccgctgcgca tcaacaccgc gggggtgatg ccgatcgtgt
      121 tcgcccagtc gatcatcgtc gtgccgggcg cgttcgcgca gttcttcccg cagtacgagt
      181 tcacgcggcg cctggccgac atcttcgcgc cggacacctt ctggttcctc gcctcgcagg
      241 cgatcctcat cctgttcttc acgtacttct acacgtcgat catcttcaac ccgatcgacc
      301 tggcggagaa cctgaagaag cagggcggct tcatccccgg cgtgaagccg ggggcccgga
      361 cggccgagta catcgaccag gtcgtgtcgc gcatcaccct gcccggggcg atcttcctca
      421 ccctgatcgc cctgctgccg gtcgtgatct ccacggcgat caacgtcccg ttcaccttcg
      481 gcggcacctc gctgctgatc gtcgtcggcg tggcgctcga cacgctggcc cagatgcagc
      541 agcacctgct gctccggaag tacgacggct tcatgaagaa ggggcgcctc aaggcccgcg
      601 gcagccagac caccggcagc gggttctagc gccctccgcc ggcgggggca cgtcccgccg
      661 gtgccccgca ctctcctccg atgatcatcg ttctcttcgg gaagcccgga gccggaaagg
      721 ggacccaagc gccgctgctc gcagcggcgc ttggcgttcc gaccctcgcg acgggcgatg
      781 agctccgcgc cgccatcaag gcggggacgg cgctcggccg cgaggccaag agctacatgg
      841 accgcggcga cctcgtgccg gacgcggtca tcctcggcat catcaagcag gcgctcagcg
      901 agccccgcac cgccggcggc gtgctgctcg acggcgtggt gcgcacggtg ccgcaggccg
      961 acgggctggc gaaggccacc gcggagctgg gcaagcaggt ggacgcggtg ctctgcttcg
     1021 acatcgacga cgacgagatc gtgcgccggc tggccggccg caccgtctgc gagtcgtgcc
     1081 agacgccgtt caccggccgc gagccgggta cggcgtgcga caagtgcggc ggcaccctcg
     1141 tgcgccgcaa ggacgacgag ccggaggcga tccgcaaccg gctcgccgtc tacgaccggc
     1201 agacccgccc cgtgctcgac tggtacaagc agcatggcac caaggtcgcg gtgatcgacg
     1261 ccgtgggatc ggtgcaggac gtgaccgccc gcgccctcgg ggtgctggcg tcgtgaccgg
     1321 gggcggctcg tgatccagct caagagcgca cgcgagatcg agctgatggc cgagggggga
     1381 cggatcctcg ccgccacggt gcagcacgtg cgcgacgcgg tgcgccccgg gatctcgacc
     1441 ctcgagctgg atgccgtggc ggagcagttc atccgcagcc atcccggcgc cacgccggcg
     1501 ttcaaggggc tgtacggctt cacgggctcc atctgcgcct cgatcaacga ggagatcgtc
     1561 cacggcatcc cgtcgaagaa gcgggtgctg gccgagggcg acatcatctc gatcgacgtg
     1621 ggggtggcct accgcggcta cttcaccgac tcggcgacca cggtgccggt gggggcggtg
     1681 gacgccgaga cggcgcgcct cctcgaggtc acggagcggt cgctcgcggc gggcatcgcc
     1741 gccgcgatcc ccggcaacca cctgggcgac atcggcgccg cggtgcagca ggtggtggag
     1801 ggggcggggt tcagcgtcgt ccgcgacctg gtgggccacg ggatcggggt cgagttccac
     1861 gaggagcccc aggtgcccaa ctacgggaag ccgaagcgcg gcctcaagct cgtgcccggc
     1921 ctcacgatcg ccatcgagcc gatggtgaac atcggcagcc cgatgacgcg caccctgccc
     1981 gacaagtgga cgatcgtcac cgtggacggc tcgcggtcgg cgcacttcga gcacacggtg
     2041 gccatcacca ccgacgggaa ccgggtgctc accgccgcgt gaacggtgat cggtgatggg
     2101 tgaacgggaa accgtgcgcc gttcaccgct ctctcaac
//
LOCUS       DASSYW010001088         2705 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_464292, whole genome shotgun sequence.
ACCESSION   DASSYW010001088 DASSYW010000000
VERSION     DASSYW010001088.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2705)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2705)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2705
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_464292"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..187
                     /locus_tag="VFN38_17210"
     CDS             <1..187
                     /locus_tag="VFN38_17210"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HET9013567.1"
                     /translation="IGGEQMYQALRSLGVETQLVIYPNQFHGITIPSYRVDRLRRYVG
                     WYDRFLKGTPAAAGGER"
     gene            complement(262..1026)
                     /locus_tag="VFN38_17215"
     CDS             complement(262..1026)
                     /locus_tag="VFN38_17215"
                     /inference="COORDINATES: protein motif:HMM:NF021759.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SprT-like domain-containing protein"
                     /protein_id="HET9013568.1"
                     /translation="MLRTLTRLFRPRRDTAQLELGFHGGTPHNAEELLARLRRLGLRR
                     IERCRLTRNRNVMVSFGGGELRVHEGYLGAPEPVLQAIVTFVEGRTRAERRDAQRVIV
                     AHPVRSPRPAARRERTHADDMELAVQLVAWHGRYNARHFDGRLKAIEIRVSRRMKTRL
                     GHYTAATTGGETAEIAISRAHLRRHGWPEALHTLLHEMVHQWQDESGHTIDHGATFRA
                     KARAVGIAPYARRVLATRPGRSEGSTTLGRRAARKG"
     gene            complement(1011..1838)
                     /locus_tag="VFN38_17220"
     CDS             complement(1011..1838)
                     /locus_tag="VFN38_17220"
                     /inference="COORDINATES: protein motif:HMM:NF024258.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HET9013569.1"
                     /translation="MTTVTLFHCSDLHFGHPAVPEQYEAMESLIVERKFDVVAISGDV
                     TQRARSGEFQRARAFIRHAEGYSKVICIPGNHDVQWWKSPLGLGDDGAILANYRRFVN
                     PEIEPVLRVPGVTLAGLNTSHGVTRQTLTWRVRDVSIIGIVRRAQIERMRAIFADIPT
                     SDARVIVMHHNPMKGELSQRHGLKNTPRVLGAFADLQTDLVLCGHDHQDAVHYVEHTR
                     KGTVISTAGTVSNRMRGGRPSSVNAISISPEQIEVSTLVWSQSDLAFLPGASKCFAR"
     gene            complement(1846..>2705)
                     /locus_tag="VFN38_17225"
     CDS             complement(1846..>2705)
                     /locus_tag="VFN38_17225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="isocitrate/isopropylmalate family dehydrogenase"
                     /protein_id="HET9013570.1"
                     /translation="PEATLDSIKRTRLALKGPLETPVGEGFRSINVALRKTFDLYANI
                     RPAHTIVQGARYDNIDLVLVRENTEGLYVGIEHYIKVGSDPRAAAESTAIITRAGSER
                     IVRYAFDYAVKHGRKKVTLVHKANILKFSQGLFLDVGRQIACEYENIEFEEVIVDAMA
                     MNLVLKPERYDVIVTTNLFGDILSDLISGLVGGLGLAPGANIGLGGAIFEAVHGTAPD
                     IAGKGIANPSALILAGCMMLEYMNDGERARRIRDALETTIREKKVVTRDLGGTATTDQ
                     FTDAIIARL"
BASE COUNT          371 a          965 c          930 g          439 t
ORIGIN      
        1 catcggcggc gagcagatgt accaggcgct gcgctcgctg ggcgtggaga cgcaactcgt
       61 gatctacccg aaccagttcc acggcatcac gatcccgagc taccgggtgg accggctgcg
      121 gcggtacgtg gggtggtacg accggttcct gaaggggacg ccggcggcgg cgggaggcga
      181 acggtgaacg gtgaacggtg aacggtgaac ggtgggagcg gtcaccgcct caccgcctca
      241 ccgcctcacc gccccaccgc ctcacccctt tctcgccgcg cgccgtccga gtgtcgtcga
      301 tccttcgctc cggccgggcc gcgtcgccag cacgcgccgc gcgtacggcg cgatccccac
      361 tgcgcgcgcc ttcgcgcgga aggtcgcgcc atgatcgatc gtgtggccgc tctcgtcctg
      421 ccactggtgc accatctcgt gcagcagggt gtgcagcgcc tccggccacc cgtgccggcg
      481 caggtgcgcc cggctgatcg cgatctccgc cgtctcgccg ccggtggtgg cggcggtgta
      541 gtggccgagc cgcgtcttca tgcgccgcga cacccggatc tcgatcgcct tgagccggcc
      601 gtcgaagtgg cgcgcgttgt agcgcccgtg ccaggcgacg agctgcacgg ccagctccat
      661 gtcgtcggca tgggtgcgct cgcggcgcgc cgccggccgc ggcgacctca ccggatgcgc
      721 cacgatcacg cgctgcgcgt cgcgccgctc ggcgcgggtg cgcccctcca cgaaggtgac
      781 gatggcctgg agcaccggct ccggcgcgcc gaggtagccc tcgtgcactc gcagctcgcc
      841 cccgccgaag ctcaccatca cgttgcggtt ccgcgtcagc cggcagcgct cgatgcgccg
      901 caggcccagc cggcgcagcc gcgccagcag ctcctcggcg ttgtgcggcg tccccccgtg
      961 gaagccgagc tccagctggg cggtgtcgcg ccgggggcgg aacaggcggg tcagcgtgcg
     1021 aagcacttgc tggcgcccgg caggaaggcg aggtcggact gcgaccacac gagggtggac
     1081 acttcgatct gctccggcga gatgctgatg gcgttcaccg acgacgggcg tcccccgcgc
     1141 atgcggttcg acacggtgcc ggccgtggag atgacggtgc ccttgcgggt gtgctccacg
     1201 tagtggaccg cgtcctgatg gtcgtgcccg cacagcacca ggtccgtctg gaggtcggcg
     1261 aacgcgccca gcacgcgcgg cgtgttcttg agcccgtgcc gctgcgagag ctcccccttc
     1321 atgggattgt ggtgcatcac gatcacccgg gcgtcactcg tggggatgtc ggcgaagatc
     1381 gcgcgcatcc gctcgatctg cgcgcggcgg acgatgccga tgatcgacac gtcgcgcacc
     1441 cgccaggtga gggtctgccg ggtgacgccg tgcgaggtgt tgaggccggc cagggtcacg
     1501 cccggcaccc gcagcaccgg ctcgatctcg gggttcacga agcgccggta gttggccagg
     1561 atcgccccgt cgtcgccgag gccgagcggc gacttccacc actgcacgtc gtggttgccc
     1621 gggatgcaga tcaccttgct gtatccctcg gcgtgccgga tgaaggcccg cgcccgctgg
     1681 aactcccccg accgcgcccg ctgcgtcacg tcgcccgaga tcgccacgac gtcgaacttc
     1741 cgctcgacga tcagcgactc catcgcctcg tactgctccg gcaccgccgg atggccgaag
     1801 tgcaggtcgg agcagtggaa gagggttacg gtcgtcacgt cggcctcaca gccgcgcgat
     1861 gatcgcgtcg gtgaactgat cggtggtcgc cgtgccgccg agatcgcgcg tgacgacctt
     1921 cttctcgcgg atcgtcgtct ccagcgcgtc gcggatccgc cgcgcccgct cgccgtcgtt
     1981 catgtactcc agcatcatgc agccggccag gatgagcgcg ctcgggttcg cgatcccctt
     2041 gcccgcgatg tccggcgccg tgccgtgcac cgcctcgaag atcgcccccc ccagcccgat
     2101 gttcgccccc ggcgcgagcc ccagcccgcc gacgaggccg gagatgaggt ccgacaggat
     2161 gtcgccgaac aggttcgtcg tcacgatcac gtcgtaccgc tccggcttga gcacgaggtt
     2221 catcgccatc gcgtccacga tgacctcttc gaactcgatg ttctcgtact cgcacgcgat
     2281 ctggcgcccg acgtcgagga agaggccctg cgagaacttg aggatgttcg ccttgtgcac
     2341 gagcgtcacc ttcttgcgcc cgtgcttcac cgcgtagtcg aaggcgtagc gcacgatgcg
     2401 ctccgagccg gcgcgggtga tgatcgccgt cgactcggcc gcggcgcgcg gatcgctccc
     2461 caccttgatg tagtgctcga tcccgacgta cagcccctcg gtgttctcgc ggacgagcac
     2521 gagatcgatg ttgtcgtagc gcgcgccctg cacgatcgtg tgcgcagggc ggatgttcgc
     2581 gtagagatcg aacgtctttc gcagcgcgac gttgatcgag cggaagcctt cgcccaccgg
     2641 ggtctcgagc gggcccttga gcgcgagccg cgtccgcttg atggaatcga gcgtcgcttc
     2701 gggga
//
LOCUS       DASSYW010001089         4491 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_675281, whole genome shotgun sequence.
ACCESSION   DASSYW010001089 DASSYW010000000
VERSION     DASSYW010001089.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4491)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4491)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4491
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_675281"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..692)
                     /locus_tag="VFN38_17230"
     CDS             complement(<1..692)
                     /locus_tag="VFN38_17230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013571.1"
                     /translation="MTSRYAALDASNTNRAEIQALDAYTYVLFAENYCNGVPTSRVDE
                     TGAFIYGSPQTGAQMLTVAIAKFDSAITLAKSLGAVAGTATSPGYVALNLATIGKGRA
                     QVDQGNYAAAAATVAAVPSTFAYNILHDENTTRQNNGVYSFTYASKRLSVSSGEGTNG
                     LPFNSDGDTRVAAFRNGGGFTASIPFYQTAKYQGFPIAGVRNSPTPLALGTEARLIEA
                     EAALAANDDATLL"
     gene            740..907
                     /locus_tag="VFN38_17235"
     CDS             740..907
                     /locus_tag="VFN38_17235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013572.1"
                     /translation="MVLLIGFVRRMSTSMRVGNVSASYSSSARRPDMSTSPSLFPLPA
                     KPSAKSPIAAL"
     gene            complement(1098..4139)
                     /locus_tag="VFN38_17240"
     CDS             complement(1098..4139)
                     /locus_tag="VFN38_17240"
                     /inference="COORDINATES: protein motif:HMM:TIGR04056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0071702 - organic substance transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SusC/RagA family TonB-linked outer membrane
                     protein"
                     /protein_id="HET9013573.1"
                     /translation="MALAFAAPAWAQSTGTISGRVVDRSTQRGLGSVQVRIVGTTRGA
                     QTDETGAYRIVAVPTGVTQLVAQRIGYGPQSRSVSVEANGTTTADFQMAVAATTLDQV
                     LVTATGQSERRRESGVSTASIDSGTVNMANVSTFSDVLSSRAPGVVVQTASGETGSGS
                     RIRIRGSNSISLSNDPLLIVDGIRADNSSQSTFLGTGGQQPSRFNDINPEDIENIEII
                     KGPAAAALYGTAAANGVIQVTTKKGRAGKTKWNAFGELGGLHDVNEYPLNYRAFGTLS
                     TAAKTTSCTIYSRATAAAGGTGCVSVDSVATNSPLSNTNVLADGNRRIAGLSAAGGSD
                     AATYFVSGEYFREQGVIPINAQQRMNIRSNLRGQLTKSLDMQLNVGYVNSDLRRPQND
                     NNVQGLISGALLGAGVDCGPAKRYPTICGTDTLSRGYFNGQPPQDIFNVNSRQFIQRL
                     TGGLVSNWTPLSWLAINGTLGADIDHRNDNETLQPNLVFTSQNSVDGYRFVFRGQIYN
                     YTSALSGTATYDYSPSIRFTSTLATQYTDIYFYRTDAQGYKLLAGTGSLAGTNARFSV
                     NETTTDVRTLGFIGREQMAWRDRLFLTAGVRTDRNSAFGADYPRIYYPSVSASYVISE
                     EDYFPKVAAISSLRLRGAYGSAGQNPGYLAAEQTFNPVAITTAAGDVAGFTVGGVGNP
                     ALRPEKSTEREFGFDLGLLNDRVNAEYTYYNKTTRDALVNVPIAPSVGTSANRFQNLG
                     EVNNAGHEALVRANVIDRDDVKFDFTVNGSWNSNKLIDLGVDALGKDILPIVIGDNGT
                     QIHREGLPLGSYFNRPLSYTDLNNDGIIGCPAGRGSATCEVTVPDSAGYLGTPFPTNE
                     IAFSPSLSIGKSVRLTATLDHRGGQKLFNLTHYFRGVSIGNAEEVHMPTVANQADQAA
                     DVAARFAAPFTTYAGFIENASFTKLREVALTLTLPQQIAARAGAASVNLTLAGRNLHT
                     WTSYTGLDPELNTNNQANFNTTDFLTAPQVRYFTARLAFAF"
BASE COUNT          658 a         1424 c         1634 g          775 t
ORIGIN      
        1 agcagcgtgg cgtcgtcgtt cgccgcgagg gccgcctcgg cctcgatcag gcgcgcctcg
       61 gtgcccagcg ccaggggcgt gggcgagttg cgcacgccag cgatcgggaa gccctggtac
      121 ttggccgtct ggtagaacgg gatggaggcg gtgaacccgc cgccgttgcg gaaggccgcg
      181 acgcgggtat cgccgtcgga gttgaacggc agcccgttcg tcccttcgcc gctcgacacg
      241 ctcaggcgct tggacgcgta cgtgaacgag tacacgccgt tgttctggcg ggtggtgttc
      301 tcgtcgtgga ggatgttgta ggcgaaggtg gacggcacgg cggccaccgt ggccgccgcc
      361 gccgcgtagt tcccctgatc gacctgcgcc cggcccttcc cgatcgtcgc cagattcagc
      421 gcgacgtagc cgggcgacgt cgccgtaccc gccacggcgc cgaggctctt ggccagcgtg
      481 atggccgaat cgaacttggc gatcgccacc gtgagcatct gggcgcccgt ctgcgggctg
      541 ccgtagatga atgcccccgt ctcgtcgacg cggctggtcg gcaccccgtt gcagtagttc
      601 tcggcgaaga gcacgtacgt gtacgcgtcc agcgcctgga tctccgcccg attggtgttg
      661 ctcgcgtcga gcgcggcgta gcggctcgtc accagctcgg ccgtcgcgcg cgcgctgcag
      721 gttgcggaag atcggcagca tggtgctgtt gatcgggttc gtccggcgca tgtcgacctc
      781 gatgcgcgtc gggaacgtct ccgcgtcgta cagctcgtcg gcgaggaggc ccgacatgag
      841 cacgagccct tcgctgtttc cgctgccggc gaagccgagc gcgaagtcgc cgatcgccgc
      901 gttgtaggcg ttcggcagcg ccgcggccga cgagaggtcc gacgggcgga ccacgtcggg
      961 cgtggcgacg gtgagcagct tgtccgtgtt gcagccggcg agcgccatcg cgcccgtgag
     1021 cgcgacgagc accgccgcgc cgcgaccggc aaatctattg aaagccatgg gagtcttcag
     1081 catgagtgag cgtcgcctca gaaggcgaag gcgagacgcg ccgtgaagta ccgcacctgc
     1141 ggcgcggtca ggaagtcggt cgtgttgaag ttcgcctggt tgttcgtgtt cagctccgga
     1201 tccagaccgg tgtagctggt ccacgtgtgc aggttgcgac cggcgagcgt gaggttgacc
     1261 gaggccgcac ccgcgcgggc cgcgatctgc tgcggcagcg tgagcgtgag cgccacttca
     1321 cgcagcttcg tgaacgaggc gttctcgatg aagcccgcgt acgtggtgaa cggcgcggcg
     1381 aaccgcgcgg ccacgtccgc cgcctgatcg gcctggttgg cgaccgtcgg catgtggact
     1441 tcctccgcgt tgccgatgga gacgccgcgg aagtagtgcg tcaggttgaa cagcttctgg
     1501 ccgccgcgat ggtcgagcgt cgcggtgagg cgcaccgact tgccgatgct gagcgagggc
     1561 gagaacgcga tctcgttcgt cgggaacggc gtgccgaggt agccggccga atccggcacg
     1621 gtcacttcgc acgtcgccga gccacgaccc gcggggcagc cgatgatgcc gtcgttgttc
     1681 aggtccgtgt acgagagcgg acggttgaag tagctgccga gggggagccc ctcgcgatgg
     1741 atctgggtgc cgttgtcgcc gatgacgatg ggcaggatgt ccttgcccag ggcgtcgacg
     1801 ccgaggtcga tcagcttgtt cgagttccac gagccgttca ccgtgaagtc gaacttcacg
     1861 tcgtcgcgat cgatgacgtt cgcgcggacg agcgcttcgt gcccggcgtt gttgacctcg
     1921 cccaggttct ggaagcggtt ggcgctggtg cccaccgagg gcgcgatcgg cacgttcacg
     1981 agggcgtccc tcgtggtctt gttgtagtac gtgtactcgg cgttcacgcg atcgttcagc
     2041 agcccgaggt cgaacccgaa ctcgcgctcg gtcgacttct cggggcgcag cgccgggttg
     2101 ccgacgccgc cgaccgtgaa gccggccacg tcaccggccg ccgtcgtgat ggccaccgga
     2161 ttgaacgtct gctcggccgc caggtagccg gggttctgcc ccgccgaccc gtaggcgccg
     2221 cggaggcgca gcgacgagat ggcggcgacc ttcgggaagt agtcctcttc gctgatgacg
     2281 tacgacgcgc tcaccgaggg gtagtagatg cgcgggtagt cggcgccgaa cgcgctgttg
     2341 cggtcggtgc ggacgccggc ggtgaggaac aggcgatcgc gccacgccat ctgctcgcgg
     2401 ccgatgaaac cgagcgtgcg gacgtcggtc gtcgtctcgt tgaccgagaa gcgcgcgttg
     2461 gtgccggcga gcgagcccgt gccggcgagc agcttgtagc cctgcgcgtc ggtgcggtag
     2521 aagtagatgt cggtgtactg cgtggcgagc gtcgacgtga agcggatcga cggcgagtag
     2581 tcgtacgtgg ccgtgccgct gagggccgag gtgtagttgt agatctggcc gcggaagacg
     2641 aagcgatagc cgtcgaccga gttctgcgac gtgaacacga ggttcggctg gagcgtctcg
     2701 ttgtcgttgc ggtggtcgat gtccgcgccg agcgtgccgt tgatcgcgag ccagctgagc
     2761 ggcgtccagt tgctcaccag gccgccggtg aggcgctgga tgaactggcg gctgttgacg
     2821 ttgaagatgt cctgcggcgg ctggccgttg aagtagccgc ggctcagcgt gtcagtgccg
     2881 cagatcgtcg gataccgctt cgccgggccg caatccacgc cggccccgag gagggcgccc
     2941 gagatgagac cctgcacgtt gttgtcgttc tgcgggcgac gcaggtcgct gttcacgtag
     3001 ccgacgttca gctgcatgtc gagcgacttg gtgagctggc cgcggaggtt gctgcggatg
     3061 ttcatgcgct gctgggcgtt gatcgggatc acgccctgct cgcggaagta ttcaccggag
     3121 acgaagtacg tcgcggcatc cgagccgccc gcggcgctca ggccggcgat gcgccgattg
     3181 ccgtcggcca gcacgttggt gttggagagc gggctgttcg tggccacgga gtcgacgctc
     3241 acgcagcccg tgccgcccgc cgcggcggtc gcgcgcgagt agatcgtgca gctcgtcgtc
     3301 ttggccgccg tgctcagcgt gccgaaggcg cgatagttga gcgggtactc gttcacgtcg
     3361 tgcagcccgc cgagctcacc gaacgcgttc cacttggtct tgccggcgcg ccccttcttg
     3421 gtcgtgacct ggatgacgcc gttcgccgcc gccgtgccgt agagcgcggc cgctgcgggt
     3481 cccttgatga tctcgatatt ctcgatatcc tcgggattga tgtcgttgaa gcgcgacggc
     3541 tgctgcccgc ccgtgccgag gaaggtcgac tgcgagctgt tgtcggcgcg gatgccgtcc
     3601 acgatcagga gcggatcgtt ggagagggag atcgagttgg agccgcggat gcggatgcgc
     3661 gagcccgagc ccgtctcacc cgacgcggtc tgcacgacga cgcccggggc gcgcgagctg
     3721 aggacgtcgg agaaggtgct cacgttcgcc atgttcacgg tgccgctgtc gatggacgcc
     3781 gtggagacgc cgctctcgcg gcgacgctcg gactggccgg tggccgtgac gagcacctgg
     3841 tccagcgtcg tggcggcgac cgccatctgg aagtcggccg tcgtggtgcc gttggcctcg
     3901 acgctcacgc tgcgcgactg cgggccgtag ccgatgcgct gggcgacgag ctgagtgaca
     3961 cccgtgggga cggcgacgat gcggtacgca cccgtctcgt ccgtctgcgc gccacgcgtg
     4021 gtgccgacga tgcggacctg gacgctgccc aggccgcgct gggtcgaccg atcgacgacg
     4081 cgaccggaga tggtgcctgt gctctgcgcc caggcgggcg cggcgaaagc cagcgccatg
     4141 gcaccagcga gaagacggcg ataaccacta ctcattagcg tactcctccg acatcggaga
     4201 aaagggaacg gacccgcgac accgggaatg ccgggatgac ccccctagcg aatggggagt
     4261 caccgttgcc gcgaaaatat ctcagagctg agttgtctgc ctcgccaggc ggcgaggatc
     4321 ccgggtcaac ttccagtgac gatcgacggc caactccgtt tcagcgcggc ggttgcggct
     4381 tcgccagcca ctcgccgccg tccaccacca tgatcgcccc cgtgatccag ctccccgccg
     4441 gggcggcgag gaaggcgacc atgttcccaa tatcggccgg tgcaccccac c
//
LOCUS       DASSYW010001090         2669 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1522357, whole genome shotgun sequence.
ACCESSION   DASSYW010001090 DASSYW010000000
VERSION     DASSYW010001090.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2669)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2669)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2669
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1522357"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            25..708
                     /locus_tag="VFN38_17245"
     CDS             25..708
                     /locus_tag="VFN38_17245"
                     /inference="COORDINATES: protein motif:HMM:TIGR03914.1"
                     /note="This protein belongs to the uracil DNA glycosylase
                     superfamily, members of which act in excision repair of
                     DNA. However, it belongs more specifically to UdgX branch,
                     whose founding member was found to bind uracil in DNA
                     (where it does not belong), without cleaving it, appears
                     to promote DNA repair by a pathway involving RecA, rather
                     than base excision; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UdgX family uracil-DNA binding protein"
                     /protein_id="HET9013574.1"
                     /translation="MPRAASSRTTPQKRASVTGSAADFLPPRLSLPALRRAAAGCRGC
                     HLWRVGTQTVFGEGARSATIMFVGEQPGDREDLAGHPFVGPSGRLLDSALERAGLDRR
                     DAYVTNAVKHFKWVPDPGGKRRIHKTPSSSEIGACHPWLDAELTVVKPRVVIALGATA
                     AKSLFGNAFRVTTQRGRVVDTPLAEAGFATVHPSSVLRTPSARRAEAEGEFVSDLKKV
                     ARWLEKHPD"
     gene            730..1356
                     /locus_tag="VFN38_17250"
     CDS             730..1356
                     /locus_tag="VFN38_17250"
                     /inference="COORDINATES: protein motif:HMM:NF012933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase"
                     /protein_id="HET9013575.1"
                     /translation="MASTHRAALAHLRRVDPVLGEIIARVGSPPPPPRRAGTHYDALV
                     RAIVFQQLSGKAAATIHRRFRELYPDKRPRAPHVLATSDDALRSAGLSRQKIGYLRDL
                     SARVVDRSLPLAHLGRLSDDAIIEHLIQVKGIGRWTVQMFLMFRLGRPDVLPELDLGI
                     QNAVQRAYGLARRPSPKEVLRLGEKWRPHATTACWYLWRSLENGDGQG"
     gene            1484..>2669
                     /locus_tag="VFN38_17255"
     CDS             1484..>2669
                     /locus_tag="VFN38_17255"
                     /inference="COORDINATES: protein motif:HMM:NF016196.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF445 domain-containing protein"
                     /protein_id="HET9013576.1"
                     /translation="MRDDTEKAIQYAIMRRRATALLAAFSVLFVAMAIVSHLHPGLAP
                     FWIGLVRATSEAAMVGGIADWFAVTALFRHPMGIPIPHTAIVAQRKDRIGRSLGNFVG
                     NNFLAREVIARQLAGMKLGERAARWLAEPPHQERVARALAGGVARAADAIPDLELLSS
                     VQGALVAQLRKVHVAPLLADLLALATTDDRHQEFLDRMVVLVNRIVEENKELIRVRIA
                     EESPWWVPEAVDDKLYQKIVSGIERTLAEVAADDAHPLRAQFDKTLRDFVEKLHSSPE
                     TIARAEAMKERLLEHPGVTELSGALLATGRDALARYAGPDAPSPEPLQRALGTLAERA
                     LGNETLLRDVDDAVERIVLGIVDQYRPEVAGLIARTVEGWDAGDASAKIEVQIGRDLQ
                     FIR"
BASE COUNT          381 a          935 c          972 g          381 t
ORIGIN      
        1 cccctccgtg acgcaagagc caccatgccg agagccgcca gtagcaggac gacgccacag
       61 aagcgggctt cagtgacagg gagcgccgcc gacttcctgc cgccgcggct gagccttccc
      121 gcgctgcgcc gcgccgcggc agggtgccgg gggtgccacc tgtggcgggt gggcacgcag
      181 acggtgttcg gcgagggagc ccgctcggcc accatcatgt tcgtgggcga gcagcccggg
      241 gaccgggagg atctggcggg ccatccgttc gtgggtccgt cgggccgcct gctcgacagc
      301 gcgctcgagc gcgccggcct ggaccgccgc gacgcctacg tcacgaacgc ggtgaagcac
      361 ttcaagtggg tgcccgatcc aggagggaag cggcgcatcc acaagacgcc cagctcgtcg
      421 gagatcggcg cctgccatcc ttggctggac gccgagctca ccgtcgtgaa gccgcgggtc
      481 gtcatcgcgc tcggggcgac cgcggcgaag tcgctgttcg ggaacgcctt ccgcgtcacc
      541 acgcagcggg ggcgcgtcgt ggacaccccg ctcgccgagg cggggttcgc cacggtgcat
      601 cccagctcgg tgctgcgcac gccgagcgca cggcgcgccg aggcggaagg ggagttcgtg
      661 agcgacctga agaaggtggc acggtggctg gagaagcatc cggattgagc ccgtcgtatc
      721 tttcccgcca tggcctccac tcaccgcgcc gccctcgccc accttcgccg cgtggatccg
      781 gtcctcggcg agatcatcgc ccgggtcggg tcgcctccgc cgccgccgcg gcgcgcgggg
      841 acgcactacg acgccctggt gcgcgccatc gtcttccagc agctctccgg caaggcggcc
      901 gcgacgatcc accgccgctt ccgcgagctg tatccggaca agcgaccgcg ggcccctcac
      961 gtgctcgcaa ccagcgacga cgcattgcgg agcgccggcc tctcgcgcca gaagatcggg
     1021 tatctgcgcg acctctcggc ccgcgtcgtc gaccggtctc tcccgctcgc gcatctgggc
     1081 cggttgtccg acgacgcgat catcgaacac ctgatccagg tgaaggggat cgggcgctgg
     1141 accgtgcaga tgttcctgat gttccggctg ggccgccccg acgtgctgcc cgagctggac
     1201 ctggggatcc agaacgcggt gcagcgcgcc tacgggctgg cgcggcgccc gtcgcccaag
     1261 gaggtgctgc gcctgggcga gaagtggcgt ccgcacgcga cgacggcgtg ctggtacctg
     1321 tggcggtcgc tcgagaacgg ggacggccag gggtagcgac ggccggcgca ccacgccgtg
     1381 cgtgggcgag gtgtcgaaca gcgtggttcc cccggatgca ggtcgcccgc cacgccgctg
     1441 ggcgcgccgc cgctcccgtc ggtattttct tgcgatgctg gtcgtgcgcg acgataccga
     1501 gaaggccatc cagtacgcga tcatgcggcg ccgggccacg gcgctgctcg ccgcgttctc
     1561 cgtgctgttc gtggcgatgg cgatcgtgag ccatctccat ccgggcctcg cccccttctg
     1621 gatcggcctg gtgcgggcga cgtcggaggc ggcgatggtc ggcggcatcg ccgactggtt
     1681 cgccgtcacg gcgctgttcc gccaccccat gggaatcccg atcccccaca cggcgatcgt
     1741 ggcccagcgg aaggacagga tcgggcgcag cctcggcaac ttcgtcggca acaacttcct
     1801 ggcgcgcgag gtgatcgccc ggcagctcgc gggcatgaag ctcggcgagc gggcggcacg
     1861 ctggctggcc gagccgccgc atcaggagcg ggtcgcgcgg gcgctggccg gcggcgtggc
     1921 gcgggcggcc gacgcgatcc ccgacctgga gctgctctcc agcgtgcagg gtgccctcgt
     1981 ggcccagctc cggaaggtgc acgtcgcccc gctgctggcc gacctgctgg cgctggccac
     2041 gaccgacgac cggcaccagg agttcctcga ccgcatggtg gtcctcgtga accggatcgt
     2101 cgaggagaac aaggagctga tccgcgtccg gatcgccgag gagagcccct ggtgggtgcc
     2161 ggaggcggtg gatgacaaac tctaccagaa gatcgtctct ggtatcgagc gcacgctggc
     2221 ggaggtggcg gccgacgatg cccaccccct gcgcgcacag ttcgacaaga cgctgcgcga
     2281 cttcgtggag aagctgcact cgtcccccga gaccatcgcc cgcgcggagg ccatgaagga
     2341 acgcctgctg gagcatcctg gggtcaccga gctgtcaggc gcgctgctgg cgacgggccg
     2401 ggatgccctg gcgcgatacg ccggccccga cgcgccgtcg cccgagccgc tccagcgagc
     2461 gctcgggacg ctggcggagc gggcgctggg gaacgagacg ctgctccgcg atgtcgatga
     2521 cgccgtggag cggatcgtcc tcgggatcgt ggatcaatac cgtccggagg tagccggtct
     2581 catcgctcgg actgtcgaag gatgggacgc gggcgacgcc tcggcgaaga tcgaggtgca
     2641 gatcggccgc gacctgcagt tcatccgca
//
LOCUS       DASSYW010001091         2843 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_288279, whole genome shotgun sequence.
ACCESSION   DASSYW010001091 DASSYW010000000
VERSION     DASSYW010001091.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2843)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2843)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2843
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_288279"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1520)
                     /locus_tag="VFN38_17260"
     CDS             complement(<1..1520)
                     /locus_tag="VFN38_17260"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF012430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit B"
                     /protein_id="HET9013577.1"
                     /translation="MSNYTAKDITVLEGLEPVRKRPGMYIGGVGSAGLHHLVWEILDN
                     SVDEAMNGHASNISVTLHADGSSITIGDDGRGIPVDKHPKTKKSALEVIFTVLHAGGK
                     FEQGNYKTAGGLHGVGASVVNALSTELQARVKRDGAEWEMSFKRGHVQGSLKKVGAAR
                     GSGTSVYFHPDPTIFPKVEFDPALIRERLEIVSYIHKGVKVTFEDEGAKTKEVFQHDE
                     GLSEFLKKIVGERGSKAVHEAAFVIERDANPRLELALQWTESTDEHVRSFVNGIPTGS
                     GGTHENGFRAGLGKAVRNYIDTHNLSPKGVTLAAEDIREGLTGVLSLFIQEPQFQGQT
                     KDRLNNPEVTSTVDSVVRPALEHWLNHNRSMAEAIVGRAILAARAREASRAAQAEVTR
                     RTATTGRLNLPGKLSDCSSSGRDDSELFVVEGDSAGGSAKQGRDRVRQAILPLRGKVM
                     NTEGMTLAKVLENKELADFVTALGCGMGKSFDLSRLRYGKVILLADADSDGHHISTL"
     gene            1555..1953
                     /locus_tag="VFN38_17265"
     CDS             1555..1953
                     /locus_tag="VFN38_17265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013578.1"
                     /translation="MQARLVWVAFAWIAALVGLAAAMHGSGSSRPPRPFAANALARSI
                     NDAQPMAGRRWQWTATSAQSAMREMVVHVEAFDVKQARQIATAIVEPRRAQFDDILVY
                     VHRVGGSRGMAARRVEWTPRGGYEEIVYAP"
     gene            complement(1950..>2843)
                     /locus_tag="VFN38_17270"
     CDS             complement(1950..>2843)
                     /locus_tag="VFN38_17270"
                     /inference="COORDINATES: protein motif:HMM:NF024278.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OST-HTH/LOTUS domain-containing protein"
                     /protein_id="HET9013579.1"
                     /translation="STFSEREYGAGSFRDFMEKVAQTGAVELKHHGRSMLVEAVATES
                     SAVPVAPPAEAVDGAEASSPAAAASVNGAASPDLEADTEEEETLPASPMSMQDGIKAV
                     QHAFSNAGQIRWPMYVRQARQFLRTAIQGFDERKYGFASVVDLLRAAGKEGVFRIERD
                     RQGAVRVFPGANLQPKAAPMDGLPVDMDETIDVEVPTELVADASFGFDQPTIEGAVDP
                     VALPEPEMAAADLAEPSMDDDEVIDDDGPQPGNSIHEPPSHSRGRKTKAAAPPRSRST
                     RAPRSGAAKTARPRARKPKPS"
BASE COUNT          387 a         1008 c          944 g          504 t
ORIGIN      
        1 agcgtcgaga tgtgatggcc gtcggagtcg gcgtcggcca ggaggatcac cttgccgtac
       61 cgcagacgcg acaggtcgaa gctcttgccc atgccgcagc cgagcgcggt gacgaaatcg
      121 gccagctcct tgttctcgag caccttggcg agtgtcatgc cctcggtgtt catcaccttg
      181 ccgcgcagcg gcagaatcgc ctgacgcacg cggtcccgcc cctgcttggc cgagccgccg
      241 gccgaatcgc cctcgaccac gaacagctcg ctgtcgtcgc gccccgagct gctgcagtcg
      301 ctcaacttgc ccggcaggtt cagccgtccg gtggttgcgg tgcgccgcgt cacctcggcc
      361 tgcgccgcgc ggctggcctc gcgggcgcgc gccgcgagaa tcgcgcgccc cacgatcgcc
      421 tcggccatcg agcggttgtg attcagccag tgctctaacg cgggacgcac caccgaatcg
      481 acggtggacg tcacctcggg gttgttcagc cgatccttcg tctgcccctg gaactgcggc
      541 tcctggatga acaggctcag cacgccggtc agcccttcgc ggatgtcctc ggccgccagc
      601 gtgacgccct tcggcgacag attgtgcgtg tcgatgtagt tgcggaccgc cttgcccagc
      661 ccggcgcgga agccgttttc gtgcgtgccg ccggagcccg tgggaatgcc gttgacgaag
      721 ctgcgcacgt gctcgtcggt ggactcggtc cactgcagcg ccagctcgag ccgcggattc
      781 gcgtcccgct cgatcacgaa cgccgcctcg tggaccgcct tcgagccgcg ttcaccgacg
      841 atcttcttca ggaactccga cagcccttcg tcgtgctgga agacctcttt cgtcttggcg
      901 ccttcgtctt cgaacgtgac cttcacgccc ttgtggatgt agctgacgat ctcgagccgc
      961 tcgcgaatca gcgccgggtc gaactccacc ttcgggaaga tcgtcgggtc cgggtggaag
     1021 tacacgctgg tgccgctgcc gcgcgccgcg cccaccttct tcagcgagcc ctggacgtgg
     1081 ccgcgcttga acgacatctc ccattcggcg ccgtcgcgct tcacgcgcgc ctgcagctca
     1141 gtggagagcg cgttgacgac gctggcgccc acgccgtgga ggccgccggc cgtcttgtag
     1201 tttccctgct cgaacttgcc gccggcgtgg agcaccgtga agatcacctc gagggcgctc
     1261 ttcttcgtct tggggtgctt gtccacggga atgccgcggc cgtcgtcgcc gatcgtgatc
     1321 gagctgccgt cggcgtgcag cgtgacgctg atgttcgagg cgtggccgtt catcgcctcg
     1381 tccaccgagt tgtcgaggat ttcccagacc aggtggtgga ggccggcgct gccgacgccg
     1441 ccgatgtaca tgcccggccg cttgcgaacc ggctcgagcc cctcgagaac ggtgatgtct
     1501 ttggctgtgt agttcgacaa ggtccttaag gtagcatcat cgcgcagcat caagatgcag
     1561 gcccggctcg tctgggtcgc gttcgcctgg attgccgcgc tcgtgggtct ggcggccgcg
     1621 atgcacggat ccggctcgtc tcgtcccccc cggccgttcg cagccaacgc actcgcccga
     1681 tcgatcaacg acgcacagcc aatggccggc cggcgctggc agtggaccgc cacgtcggcg
     1741 cagtcggcga tgcgcgagat ggtcgtacac gtcgaagcgt tcgacgtgaa gcaggcgcgc
     1801 cagattgcca cggccatcgt ggagccgcgg cgcgcgcagt tcgacgacat cctcgtctac
     1861 gtgcaccgcg tcggcggcag ccgtgggatg gccgcgcggc gtgtcgagtg gacaccgcgc
     1921 ggcggctacg aagagatcgt ctacgcgccc taggacggct tcggcttccg cgcgcgggga
     1981 cgcgcggtct tggcggcgcc gctacgtggc gcacgcgtcg agcggctgcg tggcggagct
     2041 gccgccttgg tcttgcgtcc gcggctgtgg ctcggcggct cgtggatcga attgcctggc
     2101 tgcgggccgt cgtcgtcgat cacctcgtcg tcgtccatcg agggctcggc cagatcggcc
     2161 gcagccattt ccggctcggg gagcgccacc ggatccacgg cgccctcgat ggtcggctga
     2221 tcgaagccga acgacgcgtc ggcgacgagc tctgtcggca cctcgacgtc gatcgtctcg
     2281 tccatgtcca ccggcagccc gtccatcggc gccgccttcg gctggagatt ggcgccgggg
     2341 aacacgcgaa ccgcgccctg gcgatcccgc tcgatccgga acacgccttc cttgccggcg
     2401 gcgcgcagca gatcgaccac cgacgcaaag ccgtacttcc gctcgtcgaa gccctggatc
     2461 gccgtgcgca ggaactggcg cgcctgacgc acgtacatcg gccagcgaat ctgacccgcg
     2521 ttcgaaaacg cgtgctgcac ggccttgatg ccgtcctgca tgctcatcgg cgaggccggc
     2581 agcgtttcct cttcctcggt gtcggcctcg aggtcgggcg atgccgcacc gttgaccgac
     2641 gcagccgcgg ccggcgacga ggcctccgca ccgtccaccg cctccgcggg cggcgccacg
     2701 ggcaccgcgc tcgattcggt ggccaccgcc tccacgagca tgctgcggcc gtggtgcttc
     2761 agctccacgg cgccggtctg cgccaccttc tccatgaagt cgcggaagct gccggcgccg
     2821 tactcgcgtt cggagaacgt gga
//
LOCUS       DASSYW010001092         2044 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1006425, whole genome shotgun sequence.
ACCESSION   DASSYW010001092 DASSYW010000000
VERSION     DASSYW010001092.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2044)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2044)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2044
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1006425"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1433
                     /locus_tag="VFN38_17275"
     CDS             <1..1433
                     /locus_tag="VFN38_17275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013580.1"
                     /translation="HDSTHAMPMRHDSMHAMPMKHDSTHAMPMKHDSSHAMPGMARAA
                     GADTVPAPMAGMDMIDGPFGIPMERTGSGTSWLPDDSPMHAYHRMTGPWELMLHGVAF
                     GMYDKQGSRRGDEQFSSVNWGMLMATRELGGGRLQLRGMLSAEPWTVGSRGYPLLLQT
                     GETFQGEPLHDRQHPHDLMMEVAGVYERAVTDRVGLSLYVAPVGEPAIGPVAFPHRPS
                     AMNDPMAPLGHHWQDATHISFGVLTAGIFTRSLRLEGSIFNGREPDENRTNFDYRGRS
                     LDSYAGRIAWNPSSHWSLSGSFAYLRSPENSAPDESQHRVSASIMNGRTFGQHGELAT
                     TFVYGGNRHSDTDHWEPSYLLESNLELGGAHSVFARAERVRKGADDLVLGAGGPVGDF
                     DLTSLAAGYIYEFDRLGNVRTGIGGRASVNLLPSALEPVYGTRTPRGFAIYLRFRPQR
                     MSEGHDMRPTTPGAAPHDATHRGKHD"
     gene            1488..1994
                     /locus_tag="VFN38_17280"
     CDS             1488..1994
                     /locus_tag="VFN38_17280"
                     /inference="COORDINATES: protein motif:HMM:NF024865.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HET9013581.1"
                     /translation="MNVSIGGRSILLSVSAVVLAAAIVTAPARASAAPASTRLDTVHD
                     SGAVAETVQRFHDALRQGDSTGALALLAPDAVVLESGDTESLAEYRAHHLPADIAFAQ
                     AVRETRSAIRVTVRGDAAWAVSTTSVLGTFRTRSVNSAGAELMVLSRTPTGWVISAIH
                     WSSRAKKK"
BASE COUNT          325 a          718 c          718 g          283 t
ORIGIN      
        1 agcacgacag cacgcacgcg atgccgatga ggcacgacag catgcacgcg atgccgatga
       61 agcacgacag cacgcacgcg atgccgatga agcacgacag ctcgcatgcg atgccgggga
      121 tggcgcgcgc cgccggcgcc gatacggtgc cggctccgat ggcgggcatg gacatgatcg
      181 atggaccgtt cggcatcccg atggaacgga ccggatcggg cacgagctgg ctgcccgacg
      241 actcgccgat gcacgcctac caccgcatga cgggcccgtg ggagctcatg ctgcacggcg
      301 tcgccttcgg gatgtacgac aagcagggca gccgccgtgg cgacgagcag ttctccagcg
      361 tgaactgggg gatgctgatg gccacgcgcg agctgggcgg aggtcggctg cagctccgcg
      421 ggatgctcag cgcggagccg tggacggtgg gatcgcgcgg ctatccgttg ctgctgcaga
      481 cgggcgagac cttccagggc gagccgctgc acgaccgcca gcatccccac gacctgatga
      541 tggaggtggc cggtgtgtac gagcgtgcgg tcaccgatcg ggtcgggctc tcgctgtacg
      601 tcgccccggt gggcgagccg gccatcggac cagtggcgtt cccgcatcgc ccgtcggcga
      661 tgaacgatcc catggcgccc ctcggccacc actggcagga cgccacccac atcagcttcg
      721 gggtgctcac ggcggggatc ttcacccggt cgctgcgcct ggaaggctcg atcttcaacg
      781 gacgcgagcc ggacgagaac cgcacgaact tcgactatcg cgggcggagc ctcgactcgt
      841 acgccggccg gatcgcctgg aacccctcgt cgcactggag cctctccggc tccttcgcct
      901 acctgcggag cccggagaac agcgcgccgg acgagtcgca gcatcgggtg agcgcgtcca
      961 tcatgaacgg ccgcaccttc gggcagcacg gcgagctggc gacgaccttc gtgtacggcg
     1021 gcaatcgcca ctccgacacc gaccactggg aaccgagcta cctgctggag tcgaacctcg
     1081 agctgggcgg cgcgcacagc gtgttcgccc gggccgagcg agtgcggaag ggagccgacg
     1141 atctcgtgct gggcgccggc ggcccggtcg gcgacttcga tctcacctcg ctggccgccg
     1201 gctacatcta cgagttcgac cgcctcggca acgtgcgcac ggggatcggc ggccgtgcgt
     1261 cggtgaacct gctgccctcc gcgctcgagc cggtgtacgg cacccgcacg ccgagagggt
     1321 tcgcgatcta tcttcggttc cggccgcagc ggatgtcgga ggggcacgac atgcgtccca
     1381 ctacgcccgg ggccgcaccg cacgacgcga cccaccgcgg gaagcacgat tgaccggcgc
     1441 cggcgaccgc cggcgctgaa cgagttccac catcatcgga ggtgtgcgtg aacgtatcca
     1501 tcggaggccg ctccatcctg ctgtccgtga gcgccgtcgt gctggccgcg gcgatcgtga
     1561 ccgcgcccgc gcgcgcgagc gccgctccgg catccacccg cctcgacacc gtccacgatt
     1621 ccggagcggt ggcggagacg gtgcagcgct tccacgacgc attgcggcag ggtgacagca
     1681 cgggggcgct cgccctgctc gcgccggacg cggtcgtcct cgagagcggc gataccgagt
     1741 cgctcgccga ataccgggcg caccacctgc cggccgacat cgccttcgcg caggcggtgc
     1801 gcgagacccg aagcgcgatt cgcgtcacgg tgcgcggcga cgcggcatgg gcggtgtcca
     1861 cgacctccgt gctcggcacc tttcgcaccc gctccgtcaa cagcgcgggc gccgagctga
     1921 tggtcctctc gcggacgccg acgggctggg tgatctcggc gatccactgg tcgtcgcggg
     1981 cgaagaagaa gtagcacgga cgaacggcac gaaggcggga ggagccagtg ctcctcccgc
     2041 cttc
//
LOCUS       DASSYW010001093         2650 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1356917, whole genome shotgun sequence.
ACCESSION   DASSYW010001093 DASSYW010000000
VERSION     DASSYW010001093.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2650)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2650)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2650
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1356917"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..200
                     /locus_tag="VFN38_17285"
     CDS             <1..200
                     /locus_tag="VFN38_17285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013582.1"
                     /translation="TGATDGRRLRSAGIPTYGVSGLFGDPGDARAHGRDERLLVKSYF
                     DGQEFLARLVHRLASAGTPVP"
     gene            412..1674
                     /locus_tag="VFN38_17290"
     CDS             412..1674
                     /locus_tag="VFN38_17290"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HET9013583.1"
                     /translation="MLVAALLIPGAGCSRSLAAAPEPAPVIPIPAPGPPPPRMPTVDR
                     LVPARPAEVGMDSTLPARLDSIIRVGIAEGAAPGASVAVGRYGRLVHLKGYGTLDYST
                     GSPPVDANTIYDLASLTKVVATTTSAMILEESGKLDLDRPVHSYLPELDAPDKAGITV
                     RMLLTHTGGLEAYAPLYRQARGRAEYLREINARPLANPPGALTVYSDWDMVLLQAVIE
                     RVAGMSLDNFADGHLFPPLGMSDTRFAPDTTERAYRRRIAPTTADELRGGPLQGTVHD
                     ANAWALGGVSGHAGLFSTARDLAVFAQLLLDGGTYAAVRIVAPQTVARWTSRQEGTAS
                     RALGWDTPAPASSAGRYFSPRSFGHTGFTGTSLWIDPERGLFVVLLMNRVNTRGEATR
                     HVQLRRDVSDAVQRAVLDAPLVDWEGMR"
     gene            complement(1727..>2650)
                     /locus_tag="VFN38_17295"
     CDS             complement(1727..>2650)
                     /locus_tag="VFN38_17295"
                     /inference="COORDINATES: protein motif:HMM:NF037660.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HET9013584.1"
                     /translation="ETLVDEAMHRLASAMLSVRPVDAVDLLLRLAERARERGDRAMEA
                     RAFLSLGVARMRTEDDLAGAEAFRTALSIARDAQSLEVAAHSSMNLGVIGLRGGDFDA
                     AHEALDDALRLYTTLRNNANRLAALYNLANLERERGDAEESARLYRETSALAEQLGAE
                     DIAVGAHAGAGLAALRLDTMPVAHAALDSAYQIFAGRTDWWFQGRELLESLTIRIYAH
                     AGRYDAALDRFRTAVERLEPMDVYAAAWLVADCAATLAERDPAVWDAVRRFGDHATVN
                     QFVPLAARYTALKDMSERLPGVRLAQPSANG"
BASE COUNT          350 a          982 c          944 g          374 t
ORIGIN      
        1 ccaccggcgc caccgacgga cgacgtctgc gctcggcggg gatccccacg tatggcgtga
       61 gcgggttgtt cggcgacccg ggcgacgcac gcgcgcacgg tcgcgacgaa cgcctgctcg
      121 tgaaatcgta cttcgacggg caggagtttc tcgcgcgcct cgttcatcgg ctggccagcg
      181 caggaacacc cgttccctga cgagagggaa agacacgagc ccgccggaat gcagccccgg
      241 cgggccctac gcccgtgtcc ctgttcgtcg tgcttcgctc cagacggtgg cgcacgtcac
      301 caaaccgcac gtcgtgcgcc attccggcgc ccgctgcacg agagtcgtga tgcaccgtat
      361 cattcgtgca tgtcgcttac acgtcgtacc gctgtgtcgt cccgcgcgcg catgctcgtc
      421 gccgcgctgt tgatcccggg cgcgggctgc tcgcgcagcc tcgccgccgc tcccgagcct
      481 gcaccggtca tccccattcc cgcgcccggc ccgccgccgc cgcgcatgcc caccgtggac
      541 cggctcgttc ccgcgcgtcc cgccgaggtg ggaatggact ccacgctgcc ggcgcgcctc
      601 gacagcatca tccgcgtcgg gattgccgag ggcgccgcgc cgggcgcctc cgtggccgtg
      661 ggccggtacg gccgtctcgt gcacctcaag ggatacggca cgctcgacta ctcgacgggc
      721 tcgcctccgg tggacgcgaa caccatctac gacctcgcct cgctgaccaa ggtcgtcgcg
      781 accacgacgt cggcgatgat cctcgaggag agcggcaagc tggatctcga ccgtccggtg
      841 cacagctacc tgccggagct cgacgcgccg gacaaggcgg gcatcacggt gcgcatgctg
      901 ctcacccaca ccggcgggct cgaggcatac gcgcctctct accggcaggc gcgcggccgc
      961 gccgaatatc tcagggagat caacgcgcgt ccgctcgcga acccgcccgg cgcgctgacg
     1021 gtgtacagcg actgggacat ggtgctgctg caggcggtga tcgagcgcgt cgccggcatg
     1081 tcgctggaca acttcgccga cggccacctg ttccctccgc tcggcatgag cgacacgcgg
     1141 ttcgcgcccg acacgacgga gcgcgcatat cggcgccgca tcgcgcccac cacggcggac
     1201 gagcttcgcg gcgggccgct gcagggcacg gtgcacgatg cgaacgcatg ggcgctcggc
     1261 ggcgtctccg gccacgccgg cctgttctcc acggcgcgcg acctcgccgt cttcgcccag
     1321 ctactgctcg atggcggcac ctatgccgcc gtgcgcatcg tggctcccca gacggtcgcg
     1381 cgctggacgt cgcgccagga aggaacggcg agccgcgccc tgggctggga cactcccgcc
     1441 ccggcctcga gcgccggccg ctatttctcg ccgcgcagct tcggccacac cgggttcacg
     1501 ggcacgtcgc tctggatcga tccggagcgc gggctgttcg tggtgctgct catgaaccgc
     1561 gtgaacaccc gaggcgaggc cacgcgtcac gtgcagctgc gacgggacgt gtcggacgcg
     1621 gtgcagcgcg ccgtgctgga cgcgccgctg gtggactggg aaggaatgcg gtgacgcacc
     1681 gcggccgacg cgcggcgggc tgccgccgcg tgcgtcggcc gtgccgtcag ccgttggccg
     1741 agggctgggc gaggcggacg ccgggcagcc gttccgacat gtcctttagc gcggtgtagc
     1801 gcgccgcgag cgggacgaac tggttcaccg tcgcgtggtc gccgaaccgg cgcacggcat
     1861 cccacaccgc cgggtcgcgc tcggccaggg tggcggcgca gtcggccacg agccaggccg
     1921 ccgcgtagac gtccatcggc tcgagccgct ccaccgcggt gcggaagcgg tcgagggccg
     1981 cgtcgtaccg ccccgcatgg gcgtagatcc ggatcgtgag cgactccagc agctcgcggc
     2041 cctggaacca ccagtcggtg cggccggcga agatctggta ggcggagtcg agcgccgcgt
     2101 gcgcgacggg catcgtgtcg agccgcagtg cggccaggcc ggcgccggca tgggcgccca
     2161 ccgcgatgtc ctcggccccg agctgctcgg cgagcgccga cgtctcgcgg tacagccggg
     2221 ccgactcttc cgcgtcgccg cgctcgcgct ccaggttcgc gaggttgtag agcgcggcga
     2281 gccggttcgc gttgttgcgc agcgtcgtgt acaggcggag cgcgtcgtcc agcgcctcgt
     2341 gcgccgcgtc gaagtcgccg ccgcgcagcc cgatgacccc caggttcatc gacgagtggg
     2401 ccgcgacctc gagcgactgc gcgtcacggg cgatgctgag cgccgtgcgg aacgcctcgg
     2461 cgccggcgag gtcgtcctct gtgcgcatgc gggcgacgcc gagcgacagg aaggcgcggg
     2521 cctccatggc gcggtcgccc cgttcgcggg cgcgctcggc caggcgcagc agcaggtcca
     2581 cggcgtccac cggtcgcacg ctcagcatcg cgctggcgag gcggtgcatc gcctcgtcca
     2641 cgagggtctc
//
LOCUS       DASSYW010001094         2060 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_236651, whole genome shotgun sequence.
ACCESSION   DASSYW010001094 DASSYW010000000
VERSION     DASSYW010001094.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2060)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2060)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2060
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_236651"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..783
                     /locus_tag="VFN38_17300"
     CDS             <1..783
                     /locus_tag="VFN38_17300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HDIG domain-containing protein"
                     /protein_id="HET9013585.1"
                     /translation="VVVSCFDPVRREVARLSLEKLVSDGRIHPGRIEEVVNKSKREVE
                     TAILETGVHGLHPELLKLVGLMKWRTSYGQNILQHSKEVAWLAGIMAAELGLDVALAK
                     RGAFLHDIGKVLTHEHEGTHVQLGVEVATKYGENPMVVNAIAAHHDDVPHESEISVLV
                     QAADAISGSRPGARREAFETYVKRLEGLERIASSYRGVEKVFAIQAGREVRVIVLPDD
                     VDDTRMASLTDEIARRIEAELQYPGQIKVVVIRETRTVDFAR"
     gene            773..1717
                     /gene="folD"
                     /locus_tag="VFN38_17305"
     CDS             773..1717
                     /gene="folD"
                     /locus_tag="VFN38_17305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004488 - methylenetetrahydrofolate
                     dehydrogenase (NADP+) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HET9013586.1"
                     /translation="MHADATPGALAAARLIDGVAVAREIRIEVAEAAQRLEQSGVRPG
                     LAVVLVGDDPASAVYVRAKGRACQEAGMHSVTLRLPSDTTEEALLAAVDRLNADPAIH
                     GILVQMPLPPQIRSAEVIRRILPRKDVDGFHPVNVGKLLIGERDGFAPCTPAGVQELL
                     RRSGVETRGAECVVLGRSNIVGKPMAALMMQGGEGADCTVTVCHSRTRDVAAHARRAD
                     ILVAAIGRPRFVTRDMVKPGAVVIDVGINRVDDASAKNGYRLVGDVDFDAVREVASLL
                     TPVPGGVGPMTIAMLLRNTIRAAEMERARGERACERGR"
     gene            1714..>2060
                     /locus_tag="VFN38_17310"
     CDS             1714..>2060
                     /locus_tag="VFN38_17310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013587.1"
                     /translation="MSPRRRTMGGDPALDLFGYADAAPPAETPVAARATAADEGDAPR
                     SGRRSRRAAAATEELSSLRIAEPAPSPSFEEGIPGASPASAVSVATLTHTAKDVLEGA
                     FVPLWVRGEVSDF"
BASE COUNT          301 a          724 c          768 g          267 t
ORIGIN      
        1 gtcgtcgtct cctgcttcga tccggtgcgg cgcgaggtgg cgcgcctgtc gctcgagaag
       61 ctggtgagcg acggccgcat ccacccgggt cggatcgaag aggtcgtcaa caagtcgaag
      121 cgcgaggtcg agacggcgat cctcgagacc ggcgtccacg gactccaccc cgagctcctc
      181 aagctcgtcg ggctgatgaa gtggcgcacg agctacggcc agaacatcct ccagcactcg
      241 aaggaggtcg cctggctggc ggggatcatg gccgccgagc tcgggctcga cgtcgccctg
      301 gccaagcgag gcgccttcct tcacgacatc gggaaggtgc tcacgcacga gcacgagggc
      361 acccacgtgc agctcggcgt cgaggtcgcg accaagtacg gcgagaaccc gatggtcgtc
      421 aacgccatcg ccgcgcacca cgacgacgtg ccgcacgaga gcgagatctc cgtcctcgtc
      481 caggccgccg acgcgatctc gggctcccgg cccggcgcgc ggcgcgaggc cttcgagacc
      541 tacgtcaagc ggctggaggg actcgagcgg atcgcgtcga gctatcgcgg ggtcgagaag
      601 gtgttcgcca tccaggccgg ccgcgaggtg cgcgtcatcg tcctgccgga cgacgtggac
      661 gacacgcgca tggcctcgct caccgacgag atcgcgcgcc ggatcgaggc cgagctgcag
      721 taccccggcc agatcaaggt ggtggtgatc cgcgagacgc ggacggtgga ctttgcacgc
      781 tgacgccacc cccggcgcgc tggcggccgc gcgcctgatc gatggagtcg ccgtggcgcg
      841 ggagatccgg atcgaggtgg ccgaggccgc gcagcggctc gagcagtccg gcgtgcgacc
      901 ggggctcgcc gtcgtgctcg tcggcgacga tccggcaagc gcggtctacg tccgcgcgaa
      961 ggggcgcgcc tgccaggagg cgggcatgca ctccgtcacc ctgcgactcc cctccgacac
     1021 gacggaggag gcgctgctgg ccgcggtgga ccgcctgaac gcggacccgg cgattcacgg
     1081 catcctcgtc cagatgcccc ttccgccgca gatccgctcg gcggaggtga tccgccgcat
     1141 cctgccgcgg aaggacgtgg acggattcca tccggtgaac gtgggcaagc tgctgatcgg
     1201 ggagcgggac ggcttcgctc cctgcacgcc ggccggcgtg caggagctgc tgcgccgcag
     1261 cggggtcgag acgcgcggcg ccgagtgcgt cgtgctcggc cgcagcaaca tcgtcggcaa
     1321 gccgatggcg gcgctgatga tgcagggagg ggaaggggcc gactgcacgg tcaccgtctg
     1381 ccacagccgc acgcgcgacg tcgccgccca cgcgcggcgc gccgacatcc tggtcgcggc
     1441 gatcggccgt ccgcgcttcg tgacccgcga catggtcaag cccggcgccg tcgtgatcga
     1501 cgtcgggatc aaccgggtgg acgacgccag cgcgaagaac ggctaccggc tggttgggga
     1561 cgtggatttc gacgccgtgc gcgaggtcgc atcgctgctg acgccggtcc ccggaggggt
     1621 gggcccgatg acgatcgcga tgctcctgcg gaacacgatc cgcgccgcgg agatggagcg
     1681 cgcccgcggc gagcgggcgt gcgagagggg gcggtgagcc cacgccggcg cacgatgggc
     1741 ggcgatccgg cgctcgacct cttcggctac gccgacgccg ctccccccgc cgagaccccg
     1801 gtcgcggcgc gtgcgacggc tgcggacgaa ggcgacgcgc cgcggagcgg ccggcgttcg
     1861 cgccgcgccg cggcggccac cgaggagctc tcgtcgctcc ggatcgcgga gccggcccca
     1921 tcgccctcct tcgaggaggg catcccgggc gcctcgccgg cgtcggccgt gtcggtggcg
     1981 acgctcaccc acaccgccaa ggacgtcctc gagggggcct tcgtgccgct ctgggtgcgc
     2041 ggcgaggtga gcgacttcaa
//
LOCUS       DASSYW010001095         2222 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_914732, whole genome shotgun sequence.
ACCESSION   DASSYW010001095 DASSYW010000000
VERSION     DASSYW010001095.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2222)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2222)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2222
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_914732"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            387..1328
                     /locus_tag="VFN38_17315"
     CDS             387..1328
                     /locus_tag="VFN38_17315"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016208 - AMP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HET9013588.1"
                     /translation="MSRADHSPAAGPAPAAHDTNAFRRLLVAVDDSDAAGAAASFAIW
                     LAGTAGADVTLLHACPDLQSAQHAPPMADPAAFRAAAEHRLAETTEWQRRLKNIEDYA
                     VAGARVKSWVVRGRPASAVLDAATELDSDVILIGSRGLGSTRARLLGSVSSQVVDHAR
                     CSVMVFPARQESSPAHIASVIVGVDGSPGAAPAIAAGTTLASALDARLVLLTAFESPT
                     ALTPPTDLPARLQRDAERVLATARASVPADIEVVEQLRAGPPRQMLLAAGERFGPSVL
                     VVGTRGLGGFRGLLLGSTSRSILHDASCPVLVARRPS"
     gene            1325..>2222
                     /locus_tag="VFN38_17320"
     CDS             1325..>2222
                     /locus_tag="VFN38_17320"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016208 - AMP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HET9013589.1"
                     /translation="MKVLVGFDGSPDATAAITVGAALFPEAHAHIAHVWMPPFTVHPS
                     PAQRREARTVEGFIQLLEEQGRTRADEITRDGLRLAEATGWTAEPASRRGFAGEGLEL
                     ARLAEQLDPDVLIVGARGMSGLRALLGSVSDAVAHYSPVPVLVVPRRAPHERADGPDA
                     GPVITAYDGSEGAELAFAAARRLWPSRQHVVASVACAAAQDLAPDSGLVRAVLTPKGV
                     PSTARAVADALAEHAAGIGAAVIIVGSRGQSVHREVLLGSVAMATLHHAHRPVLPVPS
                     QDRLADAAEPAALAEEQPHPLRR"
BASE COUNT          322 a          828 c          752 g          320 t
ORIGIN      
        1 aacgccccgg cgaagctcat cgtgcgagcc atcgtgacgc gacgtcgtgg cgcgcgcatc
       61 cggctccggc cacggatgga cgccggtcaa ctactgaaat ggccatgggg tcgggaacgg
      121 cagtctgatc acgccggtga gtctccttgg tcgtcatgac cgcgaacggg atgaatgcag
      181 aaggcgatcc ggcggcgagc cggccgccgg cagcggcggc ctcaatcccg gcggcaaggg
      241 cgggatcatc cgccgaccgg gccaatcgcg ttcgagcagc gcgcgaaaga ccgccattga
      301 gtacttctcc ggcgagcgtc cgcgggtgcg cacggaggtg acaaggccgg cacggtggca
      361 cgctgtcatc cccgtcgaaa ggcaccatgt cgcgcgctga ccattccccg gctgcagggc
      421 ccgcgccggc ggcccatgac acgaacgcat tccggcgcct tctcgtggcg gtggatgact
      481 cagacgcggc cggcgcggcg gcctcgttcg cgatctggct tgcgggcacg gccggcgccg
      541 acgtgacgct tctgcatgcg tgtccggacc tgcagtcggc gcagcacgct ccgccgatgg
      601 ccgacccggc cgcattccgc gctgcggccg agcaccgcct cgccgagacc accgagtggc
      661 agcgccggct gaagaacatc gaggactacg ccgtcgccgg cgcccgagtc aaatcctggg
      721 tcgtgcgcgg acgcccggcg tccgcggtgc tggacgcggc gacggaactc gacagcgacg
      781 tcatcctgat cggctccaga ggcctcggct caacgcgcgc gcggctgctg gggagcgttt
      841 cctcgcaggt ggtcgaccac gcccgctgct ccgtgatggt cttcccggca cgccaggaaa
      901 gctctcccgc gcacatcgcc agcgtgatag tcggtgtcga tgggtcgcca ggtgcggcgc
      961 ccgcgatcgc agcgggcacg acgctggcct cggcgctcga cgcgagactc gtcctcctaa
     1021 ccgcgttcga gagcccgacc gcgctcacgc cccccaccga tctacctgcg cggctacaac
     1081 gtgacgccga gcgtgtgctc gccacggcgc gcgcatcggt ccccgccgac atcgaggtag
     1141 tcgaacagct gcgcgcgggc ccaccgcgcc agatgctcct cgcagccggt gagcgcttcg
     1201 gcccgtcggt tctggtggtc ggaacccgcg ggctcggtgg gttcaggggc ctgttgctcg
     1261 gcagtacctc gcgctcgatc cttcacgacg cttcctgtcc cgtcctcgtg gcgcggcgcc
     1321 cgtcatgaag gtgctcgtcg gcttcgacgg ctctccagat gccacggcgg cgatcactgt
     1381 cggcgctgcc ttattcccgg aggcgcacgc acacatcgcc catgtctgga tgccgccgtt
     1441 cacggtccac ccctcgccgg cccaacgacg cgaggcccgc accgtggagg gattcatcca
     1501 gctgctcgaa gagcaaggcc gaacgcgagc cgatgagatc acccgcgatg gtctccggct
     1561 cgccgaggcc accggctgga ccgccgagcc cgccagtcgg cgcggcttcg ccggcgaggg
     1621 cctcgagctc gcgcgcttgg ccgagcagct cgatccggac gtcctgatcg tcggagcacg
     1681 tggcatgagc ggtctgcgag cgctcctcgg cagcgtctcg gacgccgtcg cgcactacag
     1741 cccggtgccc gtgctcgtcg tcccccggcg ggcaccgcac gagcgcgcgg acggccccga
     1801 tgcaggtcct gtgatcacgg cttacgacgg ctccgaggga gccgagctcg cattcgccgc
     1861 cgccagacgc ctctggccct cgcgccagca cgtggtagcc agcgtcgcct gtgcagccgc
     1921 acaggacctc gccccggaca gcgggcttgt acgcgcggtg ctcacgccga agggcgtgcc
     1981 gtcgacggcc cgagcggtag ccgacgcgct cgccgagcac gccgccggca ttggtgccgc
     2041 cgtaatcatc gtcggttccc gcgggcagtc cgtgcaccgc gaggtcctcc tcggcagcgt
     2101 cgcgatggcc accctgcacc acgcgcaccg acccgtattg cccgtgccat cacaagatcg
     2161 cctcgcagac gcagctgagc cggctgcact cgcagaggaa caacctcacc cgctccggcg
     2221 aa
//
LOCUS       DASSYW010001096         2426 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1821464, whole genome shotgun sequence.
ACCESSION   DASSYW010001096 DASSYW010000000
VERSION     DASSYW010001096.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2426)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2426)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2426
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1821464"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(154..1548)
                     /locus_tag="VFN38_17325"
     CDS             complement(154..1548)
                     /locus_tag="VFN38_17325"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HET9013590.1"
                     /translation="MPVPELTFLGAARTVTGSKYLLTHGKSVVLFDCGLFQGLKELRL
                     RNWQDLPIPASSITAVVLTHAHLDHVGYVPRLVKQGFKGPVFCTSGTSELSQLVLPDS
                     GRIQEEDARQANRHGYSKHSPAMPLYDEADAHRALAHFHPVSFHRQIEVADGVTVEFK
                     GSGHLLGSAYVVTRLSGGTTILFGGDLGRYARPVLPDPEDAVQADVVLVESTYGDRDH
                     PTDDQGNELAVVIRETAARGGKVVIPAFAIGRVEELLYWIRRLERERRIPVLPVYVDS
                     PMASEALRFYTQRVHELDPEMQPSSKPGAHDVSTFATARFQVIASPQQSKELTASRKP
                     GIVISSSGMATGGRVLHHLAAALPDPKNTVLLVGFQAEGTRGRQLLEGAAEVRIHGMA
                     VPVRARIAKLNQMSGHADRGEVVRWLKTLPAPPQRLFLVHGEAAPMDALKATIKNELG
                     WDAATPQHLERVTL"
     gene            1584..>2426
                     /locus_tag="VFN38_17330"
     CDS             1584..>2426
                     /locus_tag="VFN38_17330"
                     /inference="COORDINATES: protein motif:HMM:NF013123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DPP IV N-terminal domain-containing protein"
                     /protein_id="HET9013591.1"
                     /translation="MRAGFPRVYLAVAVALVAGAAVLHAQSAQKRLTLDDIYDPSTQV
                     NFSGAVPQTEWFDDDTYLMRRRGAPWRKVNAATGETSPLADAERMENALSALPGVTRG
                     EAGAAARGALEFNRAHSAVLVTIASDLFHYDLASGRATRLTNQPGEEELADFSPNGQM
                     VAFVRANNLYAVDVAGARERALTTDGNPLTFNGKLDWLYQEEIYGRGNFKGFWWSPDS
                     SRVAFLQLDERPVPEYTVTDHIPYRPALEVTAYPKVGDPNPGVRLGAVSADGGAVTWI
                     DASSY"
BASE COUNT          398 a          808 c          820 g          400 t
ORIGIN      
        1 agtagcgctg gtcgtaatag atgtcgcgcc cggcaatcgc cgccagatac aggtgccaga
       61 cgagctgctt ttctcgcagc gagagcgccg ggaagccgtc ggcggagatc tgcacgacgg
      121 ccacgtcgtc cacgtgctcg agcagatagc gcctcatagc gtcacacgct cgaggtgctg
      181 tggcgtggcc gcgtcccatc ccagctcgtt cttgatcgtc gccttcagcg cgtccatcgg
      241 cgccgcctcg ccgtggacga ggaacaggcg ctgcggcggc gcgggcagcg ttttgagcca
      301 tcgcacgacc tcgccgcggt ccgcgtggcc cgacatctga ttcagcttgg cgatgcgggc
      361 cctcacgggt accgccatgc cgtggatgcg cacttccgcg gcgccttcga gcagctggcg
      421 cccgcgcgtg ccttcggcct gaaagccgac gagcagcacg gtgttcttgg gatccggcag
      481 cgccgccgcc agatgatgca ggacgcgtcc gccggtggcc atgccgctcg acgagatgac
      541 gatgcccggc ttgcggctgg ccgtgagctc cttcgactgc tgcggcgacg cgatcacctg
      601 gaaccgggcc gtggcgaacg tggacacgtc gtgcgcgccc ggtttgctgg acggctgcat
      661 ctccgggtcg agctcgtgca cgcgctgcgt gtagaaacga agggcttcgc tggccatcgg
      721 gctgtcgacg tacacgggca ggacgggaat gcggcgttcg cgctcgagcc ggcggatcca
      781 atagaggagt tcttccacgc ggccgatcgc aaaggcgggg atgacgacct tcccacctcg
      841 cgccgcggtt tcacggatca ccaccgcgag ctcgttaccc tgatcatcgg tcggatgatc
      901 gcggtctcca taggtggatt cgacgagcac gacgtccgcc tggaccgcat cctccggatc
      961 cggcagcacc ggtcgcgcgt agcggccgag atccccgccg aacaagattg tcgtaccgcc
     1021 gctcaaccgg gtgacgacgt acgcagaacc gagcaggtgc cccgagccct tgaactcgac
     1081 cgtgacgccg tcggccacct cgatctgccg gtggaagctc actgggtgga aatgcgcgag
     1141 cgcacggtgc gcgtccgctt cgtcgtacag aggcatcgcc ggagagtgct tgctgtatcc
     1201 gtgccggttc gcctggcgcg catcttcctc ctggatccgg cccgagtcgg gcagcacgag
     1261 ctggctcagc tcggaggtgc cagaggtgca aaacacaggg cctttgaagc cttgcttcac
     1321 cagccggggc acgtagccga cgtgatccag gtgcgcgtgc gtgaggacga cggcggtgat
     1381 cgacgatgca ggaattggga ggtcctgcca atttcgaagt cgcagttcct tcaacccctg
     1441 aaacagcccg cagtcgaaga ggaccaccga ctttccgtgg gtcagcaagt atttggaccc
     1501 ggtgacggtg cgggcggccc ctagaaatgt cagttccggc acgggcatgg acgatatcag
     1561 ttttggacgg taggcttctc gtcatgagag caggtttccc tcgcgtgtat ctcgccgtcg
     1621 ccgtggcgct ggtcgcgggc gcggccgttc tgcatgccca gtccgcgcag aagcgcctga
     1681 cgctcgacga catctacgac ccgtccacgc aggtgaactt cagcggcgcg gtgccgcaga
     1741 ccgagtggtt cgacgacgac acgtatctga tgcgccgccg gggcgcgccg tggcggaaag
     1801 tgaacgcggc caccggcgag acctcgccgc tcgccgacgc ggagcgcatg gagaacgcgc
     1861 tgtcggcgct gccgggtgtc acgcgcggcg aggccggggc ggccgcgcgc ggcgcgctgg
     1921 agttcaatcg cgcgcattcg gccgtgctcg tcacgatcgc gtcggacctc tttcactacg
     1981 accttgcgtc gggacgcgcc acgcgcctca cgaaccagcc gggggaagaa gagctcgcgg
     2041 acttcagccc gaacggccag atggtggcct tcgtccgcgc gaacaatctc tacgccgtgg
     2101 acgtggccgg cgcgcgcgag cgggcgctca cgaccgacgg caacccgctc accttcaacg
     2161 gcaagctcga ttggctgtat caggaagaga tctacggacg cggcaacttc aagggcttct
     2221 ggtggagccc ggattcgtca cgcgtcgcgt tcctgcagct cgacgaacgg cccgtgccgg
     2281 agtacacggt caccgaccac attccctacc ggcccgcgct cgaggtcacc gcctacccga
     2341 aagtcggcga tccgaatccc ggggtacggc tcggcgccgt gtccgccgat ggcggagccg
     2401 tcacgtggat cgacgcgagc agctac
//
LOCUS       DASSYW010001097         2023 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_787543, whole genome shotgun sequence.
ACCESSION   DASSYW010001097 DASSYW010000000
VERSION     DASSYW010001097.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2023)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2023)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2023
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_787543"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2023)
                     /locus_tag="VFN38_17335"
     CDS             complement(<1..>2023)
                     /locus_tag="VFN38_17335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013592.1"
                     /translation="YVAGRFGDDVVPRLLRVAPAIRLEDALEEVLGISTEQLTKDWHA
                     AILSVAAPVLTAVGRELEGRDALVQGKQFSAELNVGPALSPDGRWLAFISTRSLLSVD
                     VFIADASNGRVVRKLTSTATDPHFSSIQFIYSAGTWDRASRRLAVATVAGGRPALAIY
                     DALKGSLEQEIPIRDVDEIVAPAWNADGSAIAFSGLHGGLTDLYVYDLQSAQLRRLTT
                     DPFADLQPSWSPDGKRIAFSTDRFTSDIATLSFGDYQLGVIDVANGQIERAGAGVPGK
                     QINPQWAPDGRSVYFISDRDGVSNVYRAAIGGDVTQITTIPTGVSGITGLSPALGVAS
                     GTGTVAFSVYQGGSYSIYTLANPTGTAPRQLTVDAATLPPLQRRTNEVTKLLENPTQG
                     LPSPAEKYPVEPYKASLKLEGVMQPSVGVGVSRFGTSFGGGIALQFSDLLRNHTLSVA
                     VQVNSPVGNSTGLKDIGAQVGYLNAAKRWNWGIVGGQVPYSSGGFQSGVSQRPNGDVV
                     QTDQLFVFRQTERSLTGVTAYPLSRAQRVEFSGGVSNISFDQIVRTQSFSLITGRLLE
                     DSSQTTSLGESLNLGTASAAYVFDTSVFGATSPVQGQRYRFEVAPTLGSLRFTGLLAD
                     YRRYFMPVPFYTIAARVMHYGRYGPSSEDVRLYPIDIGSPAFIRGYDSAS"
BASE COUNT          320 a          673 c          707 g          323 t
ORIGIN      
        1 cgacgccgaa tcgtagccac gaatgaaggc cggcgagccg atgtcgatcg gatagagccg
       61 aacgtcttcg ctgctggggc cgtagcggcc gtagtgcatg acgcgcgcgg caatggtgta
      121 gaacggcacc ggcatgaagt agcgccggta gtcggcgagg aggcccgtga agcgcagcga
      181 gccgagcgtc ggcgccacct cgaagcggta gcgttgcccc tgcacgggac tcgtggcacc
      241 gaataccgac gtatcgaaca cgtaggccgc cgacgcggtg ccgagattga gcgactcccc
      301 gagcgaggtc gtctgggacg agtcttccag gagtcttccg gtgatgagcg agaacgactg
      361 cgtccgcacg atctgatcga aggagatgtt gctcacgccg ccggagaact cgacgcgctg
      421 cgcccggctg agcggatacg ccgtcacgcc cgtgaggctg cgctcggtct ggcggaagac
      481 gaagagctga tcggtctgca ccacgtcgcc gtttggccgc tggctgacgc cgctctggaa
      541 tccgccgctc gagtagggaa cctggccgcc cacgatgccc cagttccagc gcttcgcggc
      601 gttgaggtag cccacctgcg cgccgatgtc cttcaggccc gtgctgttgc cgaccggcga
      661 gttcacctgc acggccaccg acagcgtgtg gttgcgcagc aggtcgctga actgcagcgc
      721 gatgccgccg ccgaacgacg tgccgaagcg gctcacgccc acgccgacgc tcggttgcat
      781 cacgccttcg agcttcagcg aggccttgta cggttccacc gggtacttct ccgcgggcga
      841 cggcaggccc tgcgtcggat tttcgagcag cttcgtcact tcgttcgtgc gccgttgcag
      901 cggcgggagc gtggccgcgt ccacggtgag ctgccgcggc gccgtgccgg tggggttcgc
      961 gagcgtgtag atgctgtagc tgccgccttg atacacggag aaggccaccg tgcccgtgcc
     1021 cgacgccacg ccgagcgccg ggctgagccc ggtgatcccg ctgacgccgg ttggaatcgt
     1081 cgtgatctgc gtcacgtcgc cgccgatcgc ggctcggtac acgttcgaca cgccgtcgcg
     1141 gtcagagatg aaatagacgg agcggccgtc cggcgcccat tgcgggttga tctgcttgcc
     1201 gggcacgccc gcgccggcgc gttcgatctg tccgttcgcc acgtcgatga cgcccagctg
     1261 gtagtcgccg aacgagagcg tcgcgatgtc gctggtgaag cgatcggtcg agaacgcgat
     1321 ccgcttgccg tcgggagacc acgaaggctg caggtccgcg aacgggtcgg tggtcagccg
     1381 ccgcagttgc gccgactgaa ggtcgtagac atagagatcc gtgaggccgc cgtgcagtcc
     1441 gctgaacgcg atggcgctgc cgtcggcgtt ccacgccggc gcgacgatct cgtccacgtc
     1501 gcggatcggg atctcttgct cgagcgaccc cttcagggcg tcgtagatcg caagcgcggg
     1561 acgcccgccg gccacggtgg ccaccgccag tcggcggctg gcgcgatccc acgtgccggc
     1621 ggagtagatg aactgaatgc tcgagaagtg cggatcggtg gcggtgctcg tgagcttccg
     1681 caccacgcgg ccgttcgacg cgtcggcgat gaagacgtct accgacagca gcgagcgggt
     1741 ggagatgaac gccagccagc ggccgtcggg actgagcgcc ggccccacgt tgagctcggc
     1801 gctgaactgc ttgccctgca cgagcgcgtc gcgcccttcg agctcacggc cgaccgcggt
     1861 gagcaccggc gccgccacgc tgaggatcgc cgcatgccag tccttcgtca gctgctcggt
     1921 agagatgccg agcacctcct cgagtgcgtc ttcgagccgt atcgccggcg ccaccctgag
     1981 cagccgagga acgacgtcgt cgccgaaccg tccggccacg tag
//
LOCUS       DASSYW010001098         2093 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1080438, whole genome shotgun sequence.
ACCESSION   DASSYW010001098 DASSYW010000000
VERSION     DASSYW010001098.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2093)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2093)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2093
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1080438"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..578
                     /locus_tag="VFN38_17340"
     CDS             <1..578
                     /locus_tag="VFN38_17340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013593.1"
                     /translation="WAWYELARIDESRGGSARREVDALRLLAVILAHWDNKAENQRLV
                     CAPGSDASDGGCGRPLAIMQDLGATFGPTKLDLPNWESTPVWTDRHACRVSMEQLPFA
                     GATFPETQISEEGRQFLLGLLGQLNAQQVRDLFTSAAIARFDAVSAESRDPRAWARAF
                     LFKVEQVRRAGPCPAAATLAAVSGAPAAPSR"
     gene            complement(547..1503)
                     /locus_tag="VFN38_17345"
     CDS             complement(547..1503)
                     /locus_tag="VFN38_17345"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HET9013594.1"
                     /translation="MARIAWKTLVGLVLGLTASGCRSELERGVDRATRTTVRELKPGP
                     DGLALPRRQGSIRFAVIGDPGRGDTAQYDIARQMVAWRARFDFDFVVMLGDNVYPPHT
                     PDDYRRKFDEPYKPLLDAGVTFHAAIGNHDDPASINYAKFNMGGQRYYTFRKSETRLA
                     GLAGAGVRFFVLDTRSLDPRQLRWLESELAQSQTAWKICYMHHPLYTSGRYGYGARAL
                     RLALEPILVKGDVDVVLAGHEHFYERLQPQHGITYFVSGAGGALRKGDIRRSGIEAAG
                     YDEDCHFMLMEVTGPELYFQTIARDGTTVDAGVIAKEPPERR"
     gene            complement(1539..>2093)
                     /locus_tag="VFN38_17350"
     CDS             complement(1539..>2093)
                     /locus_tag="VFN38_17350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HET9013595.1"
                     /translation="SEKLELMRQRDFKLTSNVGETERDFVARVQGAVRASRDAAVDAL
                     RKKYGARQAQITEQLRRAEAAVQRESQQASQQKLQTGLSVGATILGALFGRKTISAGT
                     LGRATTAARGVGRTMKESEDIKRAHDTVEAIRQKSRDLEDEILAETRRITDNAAPADI
                     ERLSLAPKRGQISVQLVGLGWMPQ"
BASE COUNT          292 a          726 c          741 g          334 t
ORIGIN      
        1 gctgggcgtg gtacgagctc gcgcgcatcg acgagtcgcg cggcggatcg gcgcgccgcg
       61 aagtcgacgc cctgcgcctg ctggcggtca tcctggcgca ctgggacaac aaggcggaga
      121 accagcgcct cgtgtgcgcg cccggcagcg acgcgtccga cggcggctgc ggccggccgc
      181 tcgcgatcat gcaggatctc ggcgcgacct tcggtccgac gaagctcgac ctgccgaact
      241 gggagagcac gccggtgtgg accgatcgtc acgcctgccg cgtcagcatg gagcagctgc
      301 cgtttgcagg ggcgacgttt ccggagacgc agatctcgga ggagggccgg cagttcctgc
      361 tcggcctcct cgggcagctc aacgcccagc aggtgcgcga tctcttcacg agcgccgcga
      421 tcgcccgctt cgacgcggtc tcggccgaga gccgcgatcc gcgcgcgtgg gcgcgcgcgt
      481 ttctcttcaa ggtcgagcag gtgcggcgcg ccggaccgtg cccggcggcg gcgacgctcg
      541 ccgccgtcag cggcgctccg gcggctcctt cgcgatgacg ccggcgtcga cggtcgtgcc
      601 gtcgcgcgcg atcgtctgga agtagagctc gggccccgtc acctccatca gcatgaagtg
      661 acagtcctcg tcgtagcccg ccgcttcaat cccggagcgg cggatatccc ccttgcgcag
      721 cgcgccgccc gcgcccgata cgaaatacgt gatgccgtgc tgcggctgca ggcgctcgta
      781 gaaatgctcg tggccggcga gcacgacgtc gacgtcaccc ttgacgagga tcggctcgag
      841 cgccagacgc agcgcccgcg ccccgtagcc gtagcgtccc gacgtgtaga gcggatgatg
      901 catgtagcag atcttccacg ccgtctgcga ctgcgccagt tcgctctcga gccatcgcag
      961 ctgcctggga tcgagcgacc gggtgtcgag cacgaagaag cgcacgccgg cgccggcgag
     1021 gccggccagc cgcgtctccg acttccggaa cgtgtagtag cgctgcccgc ccatgttgaa
     1081 cttcgcgtaa ttgatcgacg ccggatcgtc gtggttgcca atggccgcgt gaaacgtcac
     1141 gccggcatcg agcagcggct tgtacggttc gtcgaacttg cggcgatagt cgtcgggcgt
     1201 gtgcggagga tagacgttgt cgccgagcat gacgacgaag tcgaagtcga agcgggcgcg
     1261 ccatgcgacc atctgccggg cgatgtcgta ctgcgcggtg tcgccgcggc ccggatcgcc
     1321 gatcaccgcg aagcggatcg acccctggcg ccgcggcagc gccaggccgt cgggcccggg
     1381 cttgagctcg cggacggtcg tgcgcgtcgc acggtcgacg ccgcgttcga gctcggagcg
     1441 gcagccactc gcggtaaggc cgagaaccag accgacgagg gtcttccagg cgatcctggc
     1501 caccgattac atccgcggcg tgcggcgccg ccgcacggtc attgcggcat ccacccgagg
     1561 ccgacgagct ggacggaaat ctgcccgcgc ttcggcgcga gcgacaggcg ctcgatgtcg
     1621 gccggggcgg cgttgtcggt gatccggcgc gtctcggcca ggatctcgtc ttcgaggtcg
     1681 cgtgatttct gacggatggc ctcgacggtg tcgtgcgcgc gtttgatgtc ttcgctctcc
     1741 ttcatggtgc gccccacgcc gcgcgccgcc gtcgtcgcgc ggccgagcgt gccggcgctg
     1801 atcgtcttgc gcccgaagag cgcgccgagt atggtcgcgc cgacggaaag gccggtctgc
     1861 agcttctgct gcgacgcctg ctgcgactcg cgctgcactg cagcctcggc gcgccgcagc
     1921 tgctcggtga tctgcgcctg ccgcgccccg tacttcttgc gcagggcgtc gacggcggca
     1981 tcgcgtgagg cgcgcacggc gccctgcacg cgggcgacga aatcgcgctc ggtttcgccg
     2041 acgttcgagg tcagcttgaa gtcacgctgc cgcatcagct cgagcttctc cga
//
LOCUS       DASSYW010001099         3056 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_619916, whole genome shotgun sequence.
ACCESSION   DASSYW010001099 DASSYW010000000
VERSION     DASSYW010001099.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3056)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3056)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3056
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_619916"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..803)
                     /gene="coaBC"
                     /locus_tag="VFN38_17355"
     CDS             complement(<1..803)
                     /gene="coaBC"
                     /locus_tag="VFN38_17355"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR00521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004632 - phosphopantothenate--cysteine
                     ligase activity [Evidence IEA];
                     GO_function: GO:0004633 - phosphopantothenoylcysteine
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0015939 - pantothenate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HET9013596.1"
                     /translation="MTDSVVHPYAGRRVLLGVAGGIASYKTAWLARLLTKAGAEVDVV
                     MTRAATEFVGAVTFEALTGRPVYTGLFDPGHALDHIALGKGADCIVVAPATADFMARA
                     ATGQADDLLTAILLATDSRVLLVPAMNDRMWAHAQTRANAAHLRELGYLLLDPDDGML
                     AAGEGSGPGRMPEPETIFAHVGRLLERRHALRGKSVLVTAGPTREPIDPVRFISNYSS
                     GKMGVAIAAAAWRRGADVTLVAGPLAVAPPVGVTHVPVQSTTEMRDAVAS"
     gene            complement(856..1062)
                     /locus_tag="VFN38_17360"
     CDS             complement(856..1062)
                     /locus_tag="VFN38_17360"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: protein motif:HMM:NF013365.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HET9013597.1"
                     /translation="MRVFTPVEIAQHAANKYLGVLVAAKYARALNEFPGGASRDKKLT
                     TKSLEELAKGDIDYRVVPRRRSAE"
     gene            complement(1067..1714)
                     /gene="gmk"
                     /locus_tag="VFN38_17365"
     CDS             complement(1067..1714)
                     /gene="gmk"
                     /locus_tag="VFN38_17365"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004385 - guanylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HET9013598.1"
                     /translation="MSPFPVILSAQSGGGKTTIARALLARRPDLGYSVSCTTRAPRTG
                     ELPGRDYYFMSRAEFIAEREKGAFAESAEVHGNLYGTLRSEVERVLAGGQHVVMDIDV
                     QGAVQFQRAFPQAVTIFILPPSAEVLLDRLRARKTESAAQLAARLQSALQELQQVDEY
                     EYVIVNDDLDRAVASVTSIVDAEVVSRERVKNLRQQVGLLIQRLEQEIENTTPES"
     gene            complement(1711..2595)
                     /locus_tag="VFN38_17370"
     CDS             complement(1711..2595)
                     /locus_tag="VFN38_17370"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YicC/YloC family endoribonuclease"
                     /protein_id="HET9013599.1"
                     /translation="MIRSMTGFGAADGEVGGGRVSVEVRSVNHRFFSPSIKLPGTLIR
                     WEGEVRDALKRGVTRGHVTLSARFERDEDLSAASPIDETRFGAYVAQLRELQQRHGLA
                     DTLDVGTVLRMPEVFAGSVREEMPPEAGAQLVAIVDRAVVALLAMRGAEGARLVSYLD
                     ERLEVIERALDRIAVRAPERVLEQRDRLRTAVRELTDGLAVDETRLAQEIALLADRLD
                     VQEELSRFRAHIAAFRAALGAAQPDGVGKRLGFLLQEMLREANTTGSKGNDAAIVADV
                     LQVKEELERIREQVENLE"
     gene            complement(2633..>3056)
                     /locus_tag="VFN38_17375"
     CDS             complement(2633..>3056)
                     /locus_tag="VFN38_17375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013600.1"
                     /translation="EGEATGTTAALRGRLYRALYVDAWAVRWNDSTGLYRPQYQTRAE
                     LYLQTNLLNRFPRGNFGLLGSLAHEYRSNAHFATSDDAIRVAPGFRTVAFKLEIRIQT
                     AVVSYQFRNLLQERYAQVPGYFLPRQMQFYGVRWDFWN"
BASE COUNT          441 a         1091 c         1062 g          462 t
ORIGIN      
        1 gaggcgaccg catcgcgcat ctcggtggtg gactgcaccg gcacgtgggt cacgcccacg
       61 gggggcgcga cggcgagcgg gccggcgacg agggtgacgt cggcgccgcg ccgccaggcg
      121 gcggcggcga tggcgactcc catcttgccc gagctgtagt tggagatgaa gcgcaccgga
      181 tcgatcggct cgcgcgtggg accggcggtg acgagcaccg acttgccgcg cagcgcgtgc
      241 cggcgctcga ggagccgccc gacgtgcgcg aagatcgtct ccggctccgg catccgtccg
      301 gggccgctgc cctcgcccgc ggccagcatc ccgtcgtcgg gatcgagcag caggtagccc
      361 agctcgcgca ggtgcgcggc gttggcgcgg gtctgggcgt gcgcccacat ccgatcgttc
      421 atcgccggca cgagcagcac gcgcgagtcg gtggcgagga ggatcgccgt caacaggtcg
      481 tcggcctggc ccgtggcggc gcgcgccatg aagtcggccg tggccggcgc gacgacgatg
      541 cagtcggctc ccttgcccag cgcgatgtgg tcgagcgcgt ggcccggatc gaacagcccg
      601 gtatacaccg gccggccggt gagcgcctcg aaggtgaccg cgccgacgaa ctcggtcgcg
      661 gcccgcgtca tcacgacgtc cacctcggca cccgccttgg tgagcagccg cgccagccag
      721 gcggtcttgt agctcgcgat gccgccggcg acgccgagca gcacgcgtcg cccggcatac
      781 gggtggacca cggaatcggt cacgggcgtg gtggagtgga gcgcgggcga aggcgggccg
      841 cctccgcccg tgacgtcact cggccgagcg gcggcgcggg acgacgcggt agtcgatgtc
      901 gcccttcgcg agctcctcga gcgacttcgt cgtgagcttc ttgtcgcgcg atgcgccgcc
      961 ggggaactcg ttcagcgcgc gcgcgtactt ggcggcgacg aggacgccga ggtacttgtt
     1021 cgcggcgtgc tgggcaatct cgaccggtgt gaagactcgc atgactctat gattcgggtg
     1081 tggtgttctc gatttcctgc tcgagccgct ggatgagcaa cccgacctgc tggcgaagat
     1141 tcttgacccg ctcgcggctc acgacctcgg cgtccacgat ggacgtgacg ctcgccacgg
     1201 cgcggtccag gtcgtcgttc acgatcacgt actcgtactc gtccacctgc tgcagctcct
     1261 ggagcgccga ctggagccgc gccgcgagct gcgccgccga ctcggtcttc cgcgcccgca
     1321 gccgatcgag cagcacctcc gccgagggcg gaaggatgaa gatggtgacc gcctgcggga
     1381 aggcgcgctg gaactgcacc gcgccctgca cgtcgatgtc catcacgacg tgctgccccc
     1441 cggccaggac ccgctcgacc tccgaccgca gggtgccgta aaggttgccg tgcacctccg
     1501 ccgattcggc gaaggccccc ttctcccgct cggcgatgaa ctccgcgcgg ctcatgaaat
     1561 aataatcacg tcccggcagt tcgcccgtcc ggggcgcccg cgtggtgcag gacaccgagt
     1621 agccgaggtc gggccgccgt gccaggaggg cacgggcgat cgtcgtcttt ccccccccgc
     1681 tctgagcgct gaggatgacg ggaaaggggc tcactcgagg ttctccacct gctcccggat
     1741 ccgctcgagc tcctccttga cctggagcac gtccgccacg atcgccgcgt cgttcccctt
     1801 gctgccggtg gtgttcgcct cgcgcagcat ctcctggagc aggaagccca gccgcttccc
     1861 caccccgtcg ggctgggcgg cgccgagcgc ggcgcggaag gccgcgatgt gagcacggaa
     1921 ccgcgacagc tcctcctgca cgtccagtcg gtcggcgagc agggcgatct cctgcgccag
     1981 ccgcgtctcg tccaccgcca gcccgtccgt cagctcgcgc acggcggtgc gaagccggtc
     2041 gcgctgctcc agcacccgtt ccggcgcccg cacggcgatg cggtcgagcg cgcgctcgat
     2101 gacttccagc cgctcgtcca ggtagctcac caggcgcgcc ccttcggcgc cgcgcatcgc
     2161 gagcagggcc accacggcac ggtcgacgat ggcgaccagc tgtgcccccg cttccggggg
     2221 catctcctcg cgcacgctgc cggcgaacac ctcgggcatc cgaagcacgg tgccgacgtc
     2281 gagggtgtcc gcgaggccgt ggcgctgctg gagctcccgc agctgcgcca cgtaggcgcc
     2341 gaagcgggtc tcgtcgatgg ggctcgctgc cgagagatcc tcgtcgcgct cgaatcgcgc
     2401 gctgagggtc acgtggccgc gggtgacgcc gcgcttcagc gcgtcgcgca cctcgccttc
     2461 ccaccggatc agggttccag gcagcttgat ggacggactg aagaagcggt ggttcacgga
     2521 gcgcacttcc acgctcacgc gaccaccgcc cacctcgccg tcggctgcgc cgaaccccgt
     2581 catgctccgt atcatatcaa gccgcgtaag ttacggtgag acaacgacat tgtcaattcc
     2641 agaagtccca gcgcaccccg tagaactgca tctgccgcgg caggaagtag ccgggcacct
     2701 gcgcgtaccg ctcctggagc aggttccgga actggtacga caccactgcg gtctggatcc
     2761 ggatctccag cttgaacgcg acggtccgga agcccggcgc cacgcggatg gcgtcgtccg
     2821 aggtggcgaa gtgcgcgttg ctccggtact cgtgcgccag tgagccgagg aggccgaagt
     2881 tgccgcgcgg aaagcgattc aggaggttgg tctggaggta gagctccgcc cgcgtctggt
     2941 actgtgggcg atagagtccc gtggagtcgt tccagcggac cgcccacgca tccacgtaca
     3001 gcgcgcgata cagccgcccg cgcagagcgg cggtcgtgcc agtcgcctcc ccttcc
//
LOCUS       DASSYW010001100         4744 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_601159, whole genome shotgun sequence.
ACCESSION   DASSYW010001100 DASSYW010000000
VERSION     DASSYW010001100.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4744)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4744)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4744
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_601159"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..832)
                     /locus_tag="VFN38_17380"
     CDS             complement(<1..832)
                     /locus_tag="VFN38_17380"
                     /inference="COORDINATES: protein motif:HMM:NF012958.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase-fold protein"
                     /protein_id="HET9013601.1"
                     /translation="MPTRTLFQVMLLVAGLIVTGGVAGAQGSPASRTRPPAGVAAGRV
                     EEFAQFDSTYRRTRHIWIYTPPGYDAKAPVPYPLLLAFDGREYLDTIPLPLILDTLLA
                     GRHAPPMVAVLVDDSSFAVRLGDLANQPRMVSYLASQLLPWVRSRYHVTRDPQRTIVT
                     GSSAGGLASAYAAFARPHLFGNVLSQSGAFWRGAAGSNGAPFEWLTGQLSAAPKKDIV
                     FLLDVGALENHPTLGGSGPNFLDATRRFCDALLAMGYMTIYSEVPGGVHAPRTWRERL
                     P"
     gene            959..1465
                     /locus_tag="VFN38_17385"
     CDS             959..1465
                     /locus_tag="VFN38_17385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HET9013602.1"
                     /translation="MKVRFKVNGQQRSVDVPADMPLLWTLRDVLELKGTKFGCGAAQC
                     GACTVHVNGAPTRSCVLPVSAVQGADVTTVEGLSPDGTHALQRAWEELDVPQCGYCQA
                     GQLMSAAALLAKTPRPTDADIDAAMNGNLCRCATYLRIRQAIHRAADLKLEATQAGGP
                     RRQKENAP"
     gene            1462..3720
                     /locus_tag="VFN38_17390"
     CDS             1462..3720
                     /locus_tag="VFN38_17390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HET9013603.1"
                     /translation="MSDATHAGPTRREFLRASAIAGGGILLASYLRPLSATGAWLAHT
                     AADDALNAFVRITPDGIVTIVAKNPEIGQGVKTMLPMLIAEELDVDWKNVRIEQAPLD
                     TRHFTNQWAGGSTATPNHWLPMRRVGAAGRAMLIAAAAQRWGVAPADCDTEPGVVRHR
                     ASGRRLSYGEIASSAASVPAPDLATIPLKDPKSFRIIGTRVRGVDTHAIVTGKPLYGI
                     DVTMPGMLYATFVKSPVFGGTVASANLDAVRKLPGVRHAFVVDGGTALNGLLGGVAIV
                     ADSWWLAKRARDALAVTWRDGTTATQSSTAFASQAQVLSQQPPQRSLRKDGDVEAALA
                     GAAKVVRASYFYPFIAHATLEPQNCTAHFRDGTLEIWAPSQTPESGRGLVARTLGLKD
                     DDITIHITRSGGGFGRRLNNDYMVEAAWIAKQVGVPVKLLWTREDDIQHDFYRPAGFH
                     HFTGGVDAGGRIVAWQDHFVSFGEGQSFAPSAGMSAGEFPASFVSNYALHASTMPLGV
                     PTGALRAPGSNGIAFATQSFLDELAHAAGRDPLQFKLTLLDDGISATPLRAAIDRVTE
                     RAGLPLRPLSPAFDGARMRAVLHEVGVRSGWGTAPLPPGTGRGVAFHFSHRGYFAEVV
                     QASVKADGRLRVEKVWVVGDVGSDIINPGNAENQVQGAVLDGIAQALGQEITIERGRT
                     VQSNFHDFRLLRHAEAVPVEVHFLKSAFAPTGLGEPALPPVIPALCNAIFAATGKRVR
                     SLPLSKEGFSLG"
     gene            complement(3801..4007)
                     /locus_tag="VFN38_17395"
     CDS             complement(3801..4007)
                     /locus_tag="VFN38_17395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013604.1"
                     /translation="MTTQASDRNEVRARLDAKRIAELRRAVKECYCGLGPACPLWRQF
                     TPAQRAACSLDKRAVAQALWMNGM"
     gene            4161..>4744
                     /locus_tag="VFN38_17400"
     CDS             4161..>4744
                     /locus_tag="VFN38_17400"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HET9013605.1"
                     /translation="MLERQPSQRTHRSGEVPTYSGVATPAPTGRGSALGHARAICALV
                     FGPVATRQFDVRYWDGTVEHGQMSATEFRLGINRPGALRRMLLPPSELSIVESYLSGD
                     IDIDGELEAAMGLADAIGARVRSARVLARLLRHVVALPRRDLAADIRAARSEEVVEPV
                     GRPHDPSRDRAAIRFHYDVGNDFYALWLDRRMVYS"
BASE COUNT          746 a         1644 c         1648 g          706 t
ORIGIN      
        1 ccggcagccg ctcgcgccag gtgcgcggtg catggacgcc accgggcacc tcggagtaga
       61 tcgtcatgta gcccatggcg aggagcgcgt cacaaaagcg ccgcgtcgcg tcgaggaagt
      121 tcgggccgct gccgccgagc gtcgggtgat tctcgagcgc cccgacgtcg aggaggaaga
      181 cgatgtcctt tttcggcgca gcggacagct ggccggtgag ccattcgaat ggcgccccgt
      241 tcgatcccgc cgcaccgcgc cagaaggcgc cgctctgcga gagcacgttg ccgaacagat
      301 ggggacgcgc gaaggccgcg tacgccgacg ccagcccgcc cgcgctcgag ccggtgacga
      361 tggtgcgctg cgggtcgcgc gtgacgtgat agcgactgcg tacccaggga agcagctggc
      421 tggcgaggta cgacaccatg cgcggctgat tggcgagatc gccaagtcgc accgcaaacg
      481 aggaatcgtc cacgagcacg gccaccatcg ggggcgcgtg ccgccccgcc agcagggtat
      541 cgaggatcag cggtagggga atcgtgtcca gatactcgcg cccgtcgaag gcgagcagca
      601 gcggataggg caccggggct ttcgcgtcat atcccggcgg cgtgtagatc cagatgtgac
      661 gcgtgcgacg ataggtcgag tcgaactggg cgaactcctc cacgcggccg gccgcgaccc
      721 cggcgggcgg acgtgtgcgt gaggccggac tgccctgcgc gccggcgacg cccccggtca
      781 cgatgagccc ggcgacgagg agcatcacct ggaaaagtgt gcgagtcggc atggcgcaga
      841 tcgtaatgct ccagtcccat tccggcgagc cgtcccggat ggctggctac cgcgcatttt
      901 tcggcgcaga ttgagagtcc cctctcccca tgacgcgatc ggcgttcagg agcgtcacat
      961 gaaagtccgc ttcaaggtga atggccagca gcgcagcgtc gacgtccccg ctgacatgcc
     1021 gttgctctgg acgctgcgcg acgtgctcga gctcaaggga acgaagttcg gctgcggcgc
     1081 ggcacagtgt ggtgcgtgca cggtgcacgt gaacggcgcc ccgacgcgat cgtgcgttct
     1141 cccggtgtcg gccgtgcagg gcgcggatgt caccacggtg gaagggctgt cgccagacgg
     1201 cacgcatgca ctgcagcgtg cgtgggaaga gctcgacgtg ccgcagtgcg gctactgtca
     1261 ggccggacag ctcatgtccg ccgccgcact gctcgcgaag acgccgcgtc ccaccgacgc
     1321 ggacatcgac gcggcgatga acggcaacct gtgccgctgc gcgacgtatc tccggatccg
     1381 ccaggcgatc catcgcgccg ccgacctgaa gctggaggcg acgcaggccg gaggtccccg
     1441 tcggcagaag gagaatgcac catgagcgac gccactcatg ccggtcccac gcgtcgggaa
     1501 ttcctgcgcg ccagcgccat tgcgggcggt ggcatcctcc tcgcgagcta cctgcggccg
     1561 ctctcggcga cgggcgcgtg gctcgcgcac acggcggccg atgacgcgct gaacgccttc
     1621 gtccgcatca cgcccgacgg aatcgtcacc atcgtcgcca agaatcccga gatcgggcag
     1681 ggcgtgaaga cgatgctgcc gatgctgatc gccgaggagc tcgacgtgga ctggaagaac
     1741 gttcgcatcg agcaggcgcc gctcgacacg agacacttca cgaatcagtg ggcgggcggc
     1801 agcacggcga caccgaatca ctggttgccg atgcggcgcg tcggcgcggc cggccgtgcc
     1861 atgctgatcg ccgcggcggc gcagcgctgg ggcgtcgctc ccgccgactg tgacacggag
     1921 cccggcgtcg tgcgccaccg cgcgagcggc cgtcggctgt cgtacggcga gatcgcgtcg
     1981 agcgccgcgt ccgttccggc acccgacctc gcgacgatcc cgctcaagga cccgaagtcg
     2041 ttccggatca tcgggacacg cgtacggggc gtggacaccc acgccatcgt caccggcaag
     2101 ccgctctacg gcatcgacgt cacgatgccc ggcatgctgt acgccacctt cgtgaaatcg
     2161 ccggtgttcg gcggcaccgt cgcatcggcg aatctcgacg ccgtgcgcaa gctccccggc
     2221 gtgcggcacg ccttcgtcgt cgacggcggc acggcactca acggactgct cggcggcgtg
     2281 gccatcgtcg ccgacagctg gtggctcgcc aagcgcgcgc gcgacgcgct cgccgtgaca
     2341 tggcgagacg gtacgacggc cacgcagagc agtacggcgt tcgcgtctca ggcgcaggtg
     2401 ctgtcgcagc agccgccaca gcgctcgctc cgcaaggacg gcgacgtgga ggcggcgctc
     2461 gcgggggcgg cgaaggtggt tcgcgcgtcg tacttctatc cgttcatcgc gcacgccacg
     2521 ctcgagccgc agaactgcac cgcgcacttc cgcgacggca ccctcgagat ctgggcaccc
     2581 agccagaccc ccgaatcggg acgcggactc gtcgcccgca ccctcggcct caaggatgac
     2641 gacatcacca tccacatcac gcgctcgggc ggcggattcg ggcgccggct gaacaacgac
     2701 tacatggtgg aggccgcctg gatcgcgaag caggtcggcg tgccggtgaa gctgttgtgg
     2761 acgcgcgagg acgacatcca gcacgacttc taccggcccg ccggcttcca tcatttcacc
     2821 ggcggcgtgg acgcgggcgg caggatcgtc gcctggcagg accacttcgt gagctttggc
     2881 gagggacaga gcttcgctcc gtccgccggc atgagcgcgg gggagtttcc agccagcttc
     2941 gtctcgaact acgcgctgca cgcctccacc atgccgctcg gcgtgccgac gggagcattg
     3001 cgggcgcccg gcagcaacgg catcgccttc gccacgcagt cgttcctcga cgagctggcg
     3061 cacgccgcgg ggcgcgatcc gctgcagttc aagctcactc tgctcgacga cggcatcagt
     3121 gccaccccgc tgcgcgccgc catcgaccgc gtgacggaaa gggcgggact tcccttgcgt
     3181 ccgctgtcgc cggcgttcga cggcgcacgc atgcgcgccg tgctgcacga ggtgggagtg
     3241 cggtcgggtt ggggcacggc tccgctgcct ccgggcaccg gccgaggcgt cgccttccac
     3301 ttcagccacc gcggctactt cgccgaagtc gtgcaggcga gcgtgaaggc cgacggccgg
     3361 ttgcgcgtgg agaaggtctg ggtggtgggt gacgtcggca gcgacatcat caatccgggc
     3421 aacgccgaga atcaggtcca gggcgcggtg ctggacggga tcgcgcaggc gctcgggcag
     3481 gagatcacca tcgagcgcgg ccgaaccgtg cagagcaact tccacgactt ccggctgctg
     3541 cggcacgccg aagccgttcc ggtggaggtg cacttcctga agagtgcatt cgctcccacg
     3601 ggtctcggcg agcccgcgct tccgccggtg attccggcgc tgtgcaatgc gatcttcgcc
     3661 gccaccggca agcgcgtgcg gtccctacct ctgtcgaagg agggattctc gctcgggtga
     3721 tgcgggcggc gttccgccga cgaccccgcg ccgggaggtg ggcgagctac gccatccgga
     3781 tcacggggcc ggacgacgtg ctacatgcca ttcatccaga gcgcctgggc gaccgctcgc
     3841 ttgtcgagcg agcacgcggc gcgctgcgcg ggggtgaact gccgccacag cgggcaggcc
     3901 ggacccagtc cgcagtagca ctctttcacc gctcgacgca attcggcgat ccgcttggcg
     3961 tccaggcgcg cacgcacctc gttcctgtcg ctggcctgcg tcgtcatacg acctccttgg
     4021 ctccagggga gccgacatcc tgcgatgtat gatggagcgc gattgcgctc cggggcgtcg
     4081 gggactgccc gacagccaga ttgccggcac ctctggcatg gcttacgcga cgggagttat
     4141 cgttgcgaca cgaggagctc atgctcgagc gacagcccag ccagcgcacc catcggtccg
     4201 gcgaggtccc cacctattcc ggcgtcgcga cccccgcgcc aacgggacgc ggctccgcac
     4261 tcggtcatgc ccgtgccatc tgcgcgctcg tgttcgggcc ggtggccacc cgtcagttcg
     4321 acgtgcgcta ctgggacggc accgtcgagc acggccagat gagcgctacc gagttccgcc
     4381 tcggcatcaa ccggcctggc gcgctgcgtc gcatgctgct gccgccgagc gagctctcga
     4441 tcgtggaatc gtacctgtcg ggcgacatcg acatcgatgg cgagctcgag gccgcgatgg
     4501 gcctcgcgga cgcgatcggg gcgcgcgtcc gatccgcccg ggtcctcgcg cgcctcctgc
     4561 ggcacgtggt ggcgctgccg cgccgcgacc tggccgccga catccgcgcg gcacgcagcg
     4621 aagaagtcgt ggagcccgtg gggcgaccgc acgatccatc ccgcgatcgg gcggcgatcc
     4681 gattccatta cgacgtcggc aacgacttct atgcgctctg gctcgatcgg cgcatggtct
     4741 actc
//
LOCUS       DASSYW010001101         2272 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_951802, whole genome shotgun sequence.
ACCESSION   DASSYW010001101 DASSYW010000000
VERSION     DASSYW010001101.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2272)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2272)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2272
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_951802"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..723
                     /locus_tag="VFN38_17405"
     CDS             <1..723
                     /locus_tag="VFN38_17405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HET9013606.1"
                     /translation="LDEFQADYAPEMICGTARLCGIPVGIIANARGMLKDPHGGRPKF
                     GGIVYAESAEKVAFFIDRCDRQGIPLLFVQDVSGFMVGPEAEHEGIIRAGARFVEAMA
                     TARVPKIVLTVNHASGAGYYAMAGQGFDPDFIFSWPTGRMAVMEGESAVQAVHGPAID
                     RAKRAGGDPPADVSAAMEEMRADYEHQLDARYAGARGFVDAIVYPEDTRRVLATALRA
                     SLQNPGPHLGPFVLPAHLGEEL"
     gene            781..2145
                     /locus_tag="VFN38_17410"
     CDS             781..2145
                     /locus_tag="VFN38_17410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyclic terpene utilization AtuA family protein"
                     /protein_id="HET9013607.1"
                     /translation="MKQVVRVAAGQGFWGDWLEAPRRQVEGGPVDYLMLDYLAEVTMS
                     ILQKQKERDPRMGYARDFLGAMEGVLPAVVERGVKVIANAGGVNPVASAEATRELAAR
                     LGAAGKLRIGVVTGDDLLPRLDELIASGHALANMETGEPLAVVRDRVLSANAYIGSTP
                     IVEALERGANVVITGRSTDTALTMAPLRHEFGWSATDWDRMAAGIIAGHIIECGAQCS
                     GGNCLYDWRSIPDLANVGFPIVEASPDGTFAVTKHPGTGGRVSRQTVAEQLVYEMGDP
                     HAYITPDVVADFTSIQLEDAGPDRVRVHGIRGAAATDKLKVSIAYKAGFKAVGTLVYS
                     WPDAYDKAQMADRVLRERLDRLGLRFEKVLTEFVGVSATHGALAGPPSPDLPEVTLRF
                     GVRSTDRAAVERFTREIAPLVLTGPPSVTGFAGGRPKVEEIVAYWPALVDKRVVQTAV
                     QVLT"
BASE COUNT          327 a          822 c          799 g          324 t
ORIGIN      
        1 ctcgacgagt tccaggccga ctacgcgccc gagatgatct gcggcaccgc gcggctctgc
       61 ggcatccccg tggggatcat cgccaacgcg cgggggatgc tcaaggaccc gcacggcggc
      121 cgccccaagt tcggcggcat cgtgtacgcg gagagcgccg agaaggtggc gttcttcatc
      181 gatcggtgcg accggcaggg gatcccgctg ctgttcgtcc aggatgtgtc ggggttcatg
      241 gtgggtcccg aggccgagca cgaaggaatc atccgggccg gcgcgcgctt cgtcgaagca
      301 atggcgacgg cgcgcgtccc gaagatcgtg ctcaccgtca accacgcgtc gggcgccggc
      361 tactacgcga tggcgggcca gggcttcgac cccgacttca tcttctcctg gcccaccggc
      421 cggatggcgg tcatggaagg ggagtcggcg gtccaggcgg tgcacgggcc ggcgatcgac
      481 cgcgcgaagc gcgccggcgg cgatccgccg gccgacgtct cggcggcgat ggaggagatg
      541 cgcgccgact acgagcatca gctcgacgcg cgctacgccg gcgcccgcgg cttcgtggac
      601 gccatcgtct accccgagga cacgcgccgc gtcctcgcca ccgccctccg cgcgtcgctg
      661 cagaatcccg ggccgcacct cggtcccttc gtcctccccg cgcacctcgg cgaggagctc
      721 tagtcgtccc gtcgcatgcg atgcgcgacg cgcaccgcat gcactcgtga ggcagatcca
      781 gtgaagcaag tcgtacgcgt cgccgccggg cagggattct ggggcgactg gctcgaggcg
      841 ccgcgccggc aggtggaagg gggcccggtg gactacctca tgctcgacta tctcgccgag
      901 gtcacgatgt ccattctgca gaagcagaag gagcgtgatc ccaggatggg ctatgcccgt
      961 gacttcctcg gcgccatgga aggggtgctt ccggcggtcg tcgagcgcgg cgtcaaggtc
     1021 atcgccaacg ccggcggcgt gaaccccgtg gccagcgccg aggcgacgcg cgagctggcg
     1081 gcccggctgg gcgccgccgg caagctccgg atcggcgtcg tcaccggcga cgacctcctg
     1141 ccgcggctcg acgagctgat cgcctcgggg cacgcgctgg ccaacatgga gacgggcgag
     1201 ccgctggccg tcgtccgcga ccgcgtgctc agcgccaacg cctacatcgg ctcgacgccg
     1261 atcgtcgagg cgctcgagcg gggcgccaac gtcgtcatca ccggacgatc gaccgacacg
     1321 gcgctgacga tggcgccgct gcgtcacgag ttcggctgga gcgcgaccga ctgggaccgg
     1381 atggcggccg ggatcatcgc cggccacatc atcgagtgcg gcgcccagtg ctcggggggg
     1441 aactgcctct acgactggcg ctcgattccg gacctcgcca acgtcggctt cccgatcgtc
     1501 gaggcctctc ccgacgggac tttcgccgtc accaagcatc cgggcaccgg cgggcgcgtc
     1561 tcgcgccaga ccgtcgccga gcagctcgtc tacgagatgg gcgatccgca cgcctacatc
     1621 acccccgacg tcgtcgccga cttcacctcg atccagctcg aggacgccgg ccccgaccgg
     1681 gtgcgcgtgc acggcatccg cggcgccgcg gccaccgaca agctcaaggt gtcgatcgcc
     1741 tacaaggccg gcttcaaggc cgtggggacg cttgtctatt cctggcccga tgcgtacgac
     1801 aaggcgcaga tggccgaccg tgtgctccgc gagcggctcg accggctcgg tctccgcttc
     1861 gagaaggtgc tcaccgagtt cgtcggcgtc agcgcgacgc acggcgcgct cgccggcccg
     1921 ccgtcccccg atctgccgga ggtcaccctg cgcttcggag tccgttccac cgaccgcgcg
     1981 gctgtcgagc gcttcacgcg cgagatcgcg cccctcgtcc tcaccggccc gcccagcgtg
     2041 acggggttcg ccggcggccg cccgaaggtc gaggagatcg tggcctactg gccggcgctc
     2101 gtcgacaagc gcgtcgtgca gaccgccgtg caggtgctca cgtgagcgcc gccgcggcgg
     2161 ggaagacggt gcgcgtgcgc ctgctggaca ttgcgcacgc caggtccggg gacaaggggg
     2221 acaccgccaa cgtcggcgtc atcgccctgc gccccgagtg gtacgcgctg ct
//
LOCUS       DASSYW010001102         2028 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_509112, whole genome shotgun sequence.
ACCESSION   DASSYW010001102 DASSYW010000000
VERSION     DASSYW010001102.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2028)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2028)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2028
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_509112"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..585
                     /locus_tag="VFN38_17415"
     CDS             <1..585
                     /locus_tag="VFN38_17415"
                     /EC_number="4.1.1.31"
                     /inference="COORDINATES: protein motif:HMM:NF012532.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008964 - phosphoenolpyruvate carboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA];
                     GO_process: GO:0015977 - carbon fixation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxylase"
                     /protein_id="HET9013608.1"
                     /translation="ASTPEAEIGEMNIGSRPARRSAGSSVAGLRAIPWQFAWTQTRLM
                     LGAWLGVEEALDRAVARGEAALLRTMYREWPAFQSAVDLIEMVLAKADGRIAAEYDRR
                     LVPDALQPLGADLRARLERAILGVRAVSGHEELLQGTPVIRRSIDVRNPYVDPLNLVQ
                     VELLRRMRAQPDPGVHAALMVTVNGIAAGLRNTG"
     gene            899..>2028
                     /locus_tag="VFN38_17420"
     CDS             899..>2028
                     /locus_tag="VFN38_17420"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HET9013609.1"
                     /translation="MHGNGFGGRDPGDSTGLPTGLDQLGFDSAEAVTAVGDPNAKPAT
                     GGVRQTAAMRAAEGPLHVGQQFSARYIIVRLLGIGGMGAVYQAWDTELSVMVAVKVVR
                     PEVTKDASAARDIERRFKQELLLARQVTHRNVVRIHDMGEIDGIKYITMPFIEGEDLA
                     SVLRKTGRPETARVMAIARQVASGLKAAHDAGVVHRDLKPANIMLGGDSEAVIMDFGI
                     ARTASDQKAAAIASVKKVGTLSKSLESELTRVAMTMQASTMVGAVVGTVAYMAPEQAR
                     GEEVDQRTDIYAFGLILYDLLLGKRRVEDGGAVADLQKRLEHPLPPPRTALPDVAEPL
                     NRFVAQCIEPDAAKRFATTADMVAALDRLDDRGKLKPIKRAVG"
BASE COUNT          316 a          702 c          721 g          289 t
ORIGIN      
        1 gcctcgaccc cggaggcgga gatcggcgag atgaacatcg ggagccggcc cgcccggcga
       61 agcgcgggca gcagcgtggc ggggctgcgc gccatcccct ggcagttcgc gtggacgcag
      121 acccgtctga tgcttggcgc ctggctcggc gtggaagaag cgctggaccg cgcggtcgcg
      181 cgcggggaag cggcgctgct gcgcaccatg tatcgggagt ggccggcctt ccagtccgcc
      241 gtcgatctga tcgagatggt gctcgccaag gccgacgggc gcattgcggc cgaatacgat
      301 cgccggctcg tgccggacgc cctccagccg ctcggtgccg accttcgggc tcggctggag
      361 cgggccatcc tcggcgtgcg cgccgtctct ggtcacgagg agctactgca gggcaccccg
      421 gtcatccggc ggtccatcga tgtgcgaaac ccttacgtcg atccgttgaa cctggtgcag
      481 gtggaactgc tcaggcggat gcgcgcccag cccgacccgg gcgtgcacgc cgcgctgatg
      541 gtgaccgtca acggaatcgc ggccggactg cggaatacgg gctagcccgg agtgggctct
      601 agcccttcct attttcgtac ccgggcgcca taatcgagtc gcggacaaag gtttgcgcgc
      661 acttcccccc gagggtcaga cgtcgtattg ccagcgctgc ggggccagca tggccccgtc
      721 ggccggtgcc tgccccttgt gcaaggcacc acggttcacc tcgaccgctg ccggtacgct
      781 cacgcccgtt ccgggcggcg acgagactgt gtacgtcccc gccgccccct cgccggccac
      841 tccggatcct gacgctacgt atttcatccc cgcgggcgcg cccggcaacg gcggtgcggt
      901 gcacggcaac ggtttcggcg ggcgtgatcc cggcgactcg accggcctgc ccacggggct
      961 ggatcagctg ggcttcgact ccgccgaagc ggtgacggcg gtcggcgacc ccaacgcgaa
     1021 acccgccacc ggcggggtgc ggcagacggc cgcgatgcgc gcggcggaag gcccgctgca
     1081 cgtcggccag cagttcagcg cgcgctacat catcgtgcgg ctgctcggca tcggcggcat
     1141 gggcgccgtg tatcaggcct gggacaccga gctcagcgtc atggtggccg tcaaggtcgt
     1201 gcggccagag gtgacgaagg atgcgtcggc ggcgcgcgac atcgagcggc ggttcaagca
     1261 ggaactgctg ctcgcgcgcc aggtgacgca ccgcaacgtc gtgcgcatcc acgacatggg
     1321 cgagatcgac ggcatcaagt acatcacgat gccgttcatc gaaggggaag acctcgcctc
     1381 ggtgctgcgc aagaccgggc gcccggaaac ggcgcgcgtc atggccatcg cgcggcaggt
     1441 ggcatccggc ctcaaggcgg cgcacgacgc cggcgtggtc caccgggatc tcaagcccgc
     1501 caacatcatg ctcggcggcg attccgaagc cgtcatcatg gacttcggga tcgcgcgcac
     1561 cgcgtccgat cagaaagcgg cggcgatcgc gagcgtgaag aaggtgggga cgctctcgaa
     1621 gtcgctcgag agcgagctca cgcgcgtcgc gatgacgatg caggcctcca ccatggtggg
     1681 cgccgtggtc ggcaccgtcg cctacatggc ccccgagcag gcgcgcgggg aagaggtgga
     1741 ccagcgcacg gacatctatg cgttcggcct catcctctac gacctgctgc tcggcaagcg
     1801 gcgcgtggaa gacggcggcg cggtggccga tctgcagaaa cgcctcgaac atccgctgcc
     1861 gccgccgcgg accgcgttgc ccgacgtagc cgagccgctc aaccgcttcg tcgcccagtg
     1921 catcgagccc gacgcggcga agcgcttcgc gacgaccgcc gacatggtgg ccgcgctcga
     1981 tcggctcgac gaccgcggca agctgaagcc gatcaagcgg gccgtggg
//
LOCUS       DASSYW010001103         2222 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1747698, whole genome shotgun sequence.
ACCESSION   DASSYW010001103 DASSYW010000000
VERSION     DASSYW010001103.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2222)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2222)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2222
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1747698"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..287)
                     /locus_tag="VFN38_17425"
     CDS             complement(<1..287)
                     /locus_tag="VFN38_17425"
                     /EC_number="1.17.7.3"
                     /inference="COORDINATES: protein motif:HMM:NF016438.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl
                     diphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0016114 - terpenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HET9013610.1"
                     /translation="MNSAVQPAGAVSPGCLQNRRRTARFAMIDELAMPVLKLHKTVGV
                     KVGSVQVGGGAPVVVQSMTMTDTADARATATQCVELAEAGSEMVRVTVNLP"
     gene            380..1222
                     /locus_tag="VFN38_17430"
     CDS             380..1222
                     /locus_tag="VFN38_17430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013611.1"
                     /translation="MLLVAAPVQAQSVSSTDIQRLQDEVYQAGSDLSRMRTSNSTEAS
                     RLQEELDSLREEVIYLKVKLRKDTVTRREYTEVRDRVQDLRSRARGETVSRGSSSGSG
                     EPVIFDDRPRTSSSTPSTPSSSRTTQGGIPAGTEIDARVASELTSDTAQVEDRFEATT
                     VVDLYEGDRVLIPAGSVMRGVVTSVNRASRTDRKGSLTVSFNQITVRGRSYPMRGSVT
                     EAIESEGIRGEAARIGAGSAVGAVIGGIIGGGGTMVATEGKDVHVPAGTILRVRMDTP
                     PEIR"
     gene            complement(1278..>2222)
                     /locus_tag="VFN38_17435"
     CDS             complement(1278..>2222)
                     /locus_tag="VFN38_17435"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: protein motif:HMM:NF000818.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HET9013612.1"
                     /translation="FVSSGTEAAMSAVRVARAATGRDRIVKFEGCYHGHADAFLVKAG
                     SGAMTLGVPTSPGVPAAAARDTLLARYNDLGSVDKLFGANPLAIAGVVVEPIAGNMGV
                     VLPADGFLQGLRALCDTHGALLVFDEVISGFRAAAGGAQQLAGVRPDLTCLGKIIGGG
                     LPVGAYGGRASVMELVAPAGPVYQAGTLSGNPLAMTAGLWSVAALSPKLYRHMAKLTA
                     KLAAGLAGAARDAGVAMQVNAVGSMLTPFFTTQAVRDYDTALLADAQAYGRFFHEMLR
                     RGIYPPPSQWEAWFLSGAHTDKDVDATIKAAREALRKI"
BASE COUNT          358 a          755 c          773 g          336 t
ORIGIN      
        1 tccggcaggt tcaccgtcac gcgcaccatc tcggacccgg cctcggccag ctcgacacat
       61 tgcgtcgccg tcgccctggc atcggccgta tccgtcatcg tcatcgactg cacgaccacg
      121 ggcgcgccgc cgccgacctg cacggatccg accttgacgc cgacagtctt atggagcttg
      181 agcactggca tggctaactc atcgatcata gcaaagcggg cggtccggcg tcggttttgc
      241 aggcaaccag gtgagaccgc cccggccggc tgaacggcgc tgttcatcgt ctgaatcagc
      301 ggccgggcgt tcgtcagagc gagggaccta aatgagcgta cagaaagcag cttcggcatt
      361 cgtggcaggg ctcgttgccg tgctcctggt cgccgcgccg gttcaggcgc agagtgtgtc
      421 gagcacggat attcagcggc tgcaggacga ggtgtatcag gcaggttccg atctgtcccg
      481 catgaggaca tcgaacagca ccgaggcgtc gcggctgcag gaggagctcg attcgctgcg
      541 cgaggaagtc atctacctga aagtgaagct tcgcaaggac acggtgaccc ggcgcgagta
      601 caccgaggtc cgcgatcgcg tgcaggatct gcggtcgcgg gcgcgcggcg agaccgtgtc
      661 acgcggatcg tcgtcgggca gcggtgaacc ggtgatcttc gacgaccggc cgcgcacgtc
      721 gtcctcgacc ccctcaacgc cgtcgtcgtc gcggacgacg cagggcggca ttccggcggg
      781 gaccgagatt gacgcgcggg tggcgagcga gctgacgtcg gatacggccc aggtcgaaga
      841 ccgcttcgaa gcgactacag tggtcgacct ctacgagggc gatcgcgtcc tgatcccggc
      901 aggctcggtc atgcgcggcg tcgtgacctc ggtcaaccgc gcgtcgcgga ccgaccggaa
      961 gggcagcctg acggtctcct tcaatcagat taccgtccgc ggccgcagtt atccgatgcg
     1021 cggctcggtg accgaggcaa tcgagagcga aggcatccgc ggcgaggccg cacggatcgg
     1081 ggctggctcc gcggtgggcg ccgttatcgg cgggatcatc ggcggcggcg gcacgatggt
     1141 ggcgacggaa ggcaaggacg tccacgtgcc ggctggcacc atcctgcgcg tgcgcatgga
     1201 tacgccgccc gagatccgct gaccttttcg accaccgcga gggcggacct tcgtccgccc
     1261 tcgcgcctaa cgctccccta gatcttcctc agcgcttcac gcgcggcctt gatggtcgcg
     1321 tcgacgtcct tgtcggtgtg cgcgcccgac agaaaccacg cctcccactg cgacggcggc
     1381 ggatagatgc cgcggcgcag catttcgtgg aagaagcgcc cgtaggcctg cgcgtcggcg
     1441 agaagcgcgg tgtcgtagtc gcgtaccgcc tgcgtcgtga agaagggcgt cagcatcgag
     1501 cccaccgcat ttacctgcat ggcgacgccg gcatcgcgcg cggcgcccgc gaggcctgcg
     1561 gcgagtttgg ccgtcagctt cgccatgtgg cgatagagct tcggcgacag ggctgcaacc
     1621 gaccacaggc cggcggtcat cgccagcgga ttccccgaca gcgtgcccgc ctggtagacc
     1681 ggtccggccg gggcgacgag ctccatgacg ctggcgcggc cgccgtaggc gccgaccggc
     1741 agcccgccgc cgatgatctt gcccagacac gtgaggtccg ggcggacgcc cgcgagctgc
     1801 tgtgcgcccc ctgccgcggc gcggaacccg gagatgacct cgtcgaacac gagcagcgcg
     1861 ccgtgagtat cgcagagcgc gcgcagtccc tgcaggaagc catccgcggg taggaccacg
     1921 cccatgtttc cggcgatcgg ctctacgacg acgccggcga ttgccagcgg gttggcgccg
     1981 aacagcttgt ccacagagcc gagatcgttg tagcgggcga gcagcgtgtc gcgcgcggcg
     2041 gccgcgggca cgcccgggct cgtcggcacg ccgagggtca tcgcccccga ccccgctttg
     2101 acgaggaacg cgtcggcgtg cccgtgatag cagccctcga acttgacgat gcgatcgcgg
     2161 ccggtcgccg cgcgcgcgac acgcaccgcg ctcatcgccg cctcggtgcc ggagctgacg
     2221 aa
//
LOCUS       DASSYW010001104         2817 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1817749, whole genome shotgun sequence.
ACCESSION   DASSYW010001104 DASSYW010000000
VERSION     DASSYW010001104.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2817)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2817)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2817
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1817749"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..947
                     /locus_tag="VFN38_17440"
     CDS             <1..947
                     /locus_tag="VFN38_17440"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HET9013613.1"
                     /translation="RRLGLVVDAIPGGPHEMVLVDDGSRDRTLEMLQAAARSDPRLVV
                     IALSRNFGHQAALSAALDYVSGDVIVAMDGDLQDRPEAIPALLAKHRERFDVVYAQRV
                     KRKESWPLRLSYFVFYRLLASLADTRLPLDSGDFALMSRQVVDQMRAAPEHNRYLRGL
                     RSWVGFRQTGLIVERDERFAGTTNYGPIKLLKLASDGLFSFSIVPLRAAAMLGLVAIL
                     LSAAFSFYTLYAKLFLHRAPAGFTSIMLFMSFLTGVQLFFLGIIGEYIGRIYQETKRR
                     PLYVVGSVVRQGAGMPVETHRFVTPQYTPVVPARRTGP"
     gene            961..1698
                     /locus_tag="VFN38_17445"
     CDS             961..1698
                     /locus_tag="VFN38_17445"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HET9013614.1"
                     /translation="MDSDYGARYRELFQRHWWWRARERVILDALRRHRPAGGWRNVLD
                     VGCGDGLFFDELARLPGVQLVEGVEPGADLVSPGGPHRDRIHVAPFDASFQPGRRYSL
                     IVMLDVLEHLPDPAASLRHAMSLLEPDGVFLATVPAFMALWTRHDDLNHHYTRYDKAS
                     VARLAAEGGLRIDEARYFFHWTAIGKIATRIKEALIPGEPASPAVPPAPVNRALYALS
                     RAEERLLGAAPIPFGSSLMVVGGRAAN"
     gene            1973..>2817
                     /locus_tag="VFN38_17450"
     CDS             1973..>2817
                     /locus_tag="VFN38_17450"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HET9013615.1"
                     /translation="MLDAIRAGNDSTLRSQVALCEIPAPPFMETARGIAYKAAFERAG
                     LTNVRIDAVGNVIGERRGAGDGPTVVLAGHLDTVFPEGTDVRVRNENGRLTGRGIGDD
                     CRGLAVVLATARALQASTVRTSGTIVFVGNVGEEGPGNLRGTRHLFDRELKGKIDYFI
                     SVDGTGDGITSRAVGSHRYRVTYKGRGGHSYGAFGNPNPAHALGRAIAAIADLRVPTT
                     PKTTFNVGIIRGGTSVNSIPFEASMDVDMRSESAASLDALDAQVQRALRRALAAENAR
                     WPQAT"
BASE COUNT          395 a         1008 c          957 g          457 t
ORIGIN      
        1 tgcgccgcct cggtctcgtg gtggatgcga ttcccggtgg cccgcacgag atggtcctgg
       61 tggacgatgg cagccgcgat cggacgctcg agatgctgca ggcggcggcg cgcagcgatc
      121 cgcggctcgt ggtcatcgcg ctgtcgcgca acttcggcca ccaggccgcg ctgagcgccg
      181 cgctggacta cgtgtcgggc gacgtgatcg tggcgatgga tggcgacctc caggatcgtc
      241 ccgaggcgat tcccgcgctg ctcgcgaagc accgcgagag gttcgacgtc gtctatgcgc
      301 agcgcgtgaa gcggaaggag agctggccgc tgcggctcag ctacttcgtg ttctatcgcc
      361 tgctcgcgtc gctcgcggat acgcggctcc ccctcgattc gggcgacttc gccctcatgt
      421 cgcgccaggt cgtggaccag atgcgcgccg cgcccgagca caaccgctac ctgcgcggcc
      481 tgcggagctg ggtcggcttc cgtcagaccg ggctcatcgt ggagcgcgac gagcgattcg
      541 ccggcaccac caactatggg ccgatcaagc tgctcaagct ggcgtcggac ggcctgttct
      601 ccttctcgat cgtcccactg cgcgccgcgg cgatgctcgg gctcgtcgcc atcctgctct
      661 cggcggcctt ctcgttctac acgctgtacg cgaagctctt cctgcaccgg gcaccggccg
      721 gcttcacgtc gatcatgctg ttcatgtcgt tcctcaccgg cgtgcagctc ttcttcctcg
      781 gcatcatcgg ggagtacatc ggacggatct accaggagac caagcggcgg ccgctgtacg
      841 tcgtgggctc cgtcgtgcgc cagggcgccg gcatgccggt ggagacccat cgcttcgtga
      901 cgccgcagta cacgccggtg gtgccggcgc gccgcacggg cccgtaagcc cggagcccgg
      961 atggattccg actacggcgc ccgctaccgc gagctcttcc agcgacactg gtggtggcgc
     1021 gcgcgcgagc gcgtcatcct cgacgcgctg cgccggcatc gtccggccgg tgggtggcgg
     1081 aacgtcctcg acgtcggctg tggcgatggc ctgttcttcg acgagctcgc gcgactgccc
     1141 ggcgtgcagc tcgtggaggg ggtggagccg ggagcggatc tcgtgtcgcc cggtggcccg
     1201 catcgcgacc gcatccacgt cgccccgttc gacgccagct tccagccggg gcgtcgctat
     1261 tcgctgatcg tgatgctcga cgtgctggag cacctccctg atccggccgc gtcgctgcgg
     1321 cacgcgatgt cactgctcga gcccgatggc gtgttcctcg ccacggtgcc ggcgttcatg
     1381 gcgctctgga cgcgccacga cgacctgaac caccattaca cgcgctacga caaggcgagc
     1441 gtcgccaggc tggccgccga gggcggcctg cgcatcgacg aggcgcgcta cttcttccat
     1501 tggaccgcga tcggcaagat cgccacgcgg atcaaggaag cgctcatccc gggcgagccc
     1561 gcgtcgcccg ccgtgccgcc ggcgcccgtg aaccgcgcgc tgtacgcgct ctcgcgcgcc
     1621 gaggagcgcc tgctcggtgc ggcgccgatc ccgttcggga gctcgctgat ggtcgtgggc
     1681 ggtcgcgcgg cgaactgacg atcgcctgtc cgttctcaag aaaaatcggc gaaatccgcg
     1741 aaatctgcgt tcccactgct gttgggaacg cagattacac agattacgca gattggctga
     1801 tgcagaatcg gcccttcgcg cgccgcgcgc tcaccttcgc cttcgactca cgcacgtgac
     1861 tctctcgacg cctcgctccg cggctgcggt cctgctgctc gcgatcgccg ccgtccccgc
     1921 cgcctcggca cagacccctt cgcaactggc cgcacgcgcg gacgtacgca gcgtgctgga
     1981 cgcgatccgt gccggcaacg actccacgct gcggtcacag gtggccctct gcgagatccc
     2041 ggccccgccg ttcatggaga cggcgcgcgg cattgcctac aaggcggcgt tcgagcgcgc
     2101 cggcctgacc aacgtgcgca tcgacgccgt cggcaacgtc atcggcgaac ggcgcggggc
     2161 gggtgacggg ccgacggtcg tcctggcggg acatctcgat accgtcttcc ccgagggcac
     2221 cgacgtgcgc gtgcgcaacg agaacggtcg gctgaccgga cgcggcatcg gcgacgactg
     2281 ccgagggctc gccgtcgtgc tcgcgactgc gcgagcgttg caggcgtcga cggttcggac
     2341 ctccggcacg atcgtgttcg tcggcaacgt cggcgaggaa gggccgggca atctccgcgg
     2401 cacccgccac ctgttcgatc gcgagctgaa ggggaagatc gactacttca tctccgtgga
     2461 cggcacgggg gatggcatca cgagccgggc cgtcggcagc caccggtatc gcgtcaccta
     2521 caaggggcgc ggcggccaca gctacggcgc cttcggcaac ccgaatcccg cgcacgcgct
     2581 cggacgcgcc atcgccgcca tcgccgacct ccgggtgccc acgacgccga agacgacgtt
     2641 caacgtcggc atcatccgcg gcggcacgtc ggtgaactcc attccgttcg aagcgtcgat
     2701 ggacgtcgac atgcgctccg aatcggcggc gtcgctggat gcgctcgacg cccaggtcca
     2761 gcgcgccctc cggcgcgcgc tggcggccga gaacgcgcgc tggccgcagg cgacgga
//
LOCUS       DASSYW010001105         2423 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1676785, whole genome shotgun sequence.
ACCESSION   DASSYW010001105 DASSYW010000000
VERSION     DASSYW010001105.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2423)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2423)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2423
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1676785"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(137..682)
                     /locus_tag="VFN38_17455"
     CDS             complement(137..682)
                     /locus_tag="VFN38_17455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013616.1"
                     /translation="MIRRVDPALFERRYFGLCLKCGFCNDGCCQHGVDVDVGERDRIL
                     AHADELEPIVGVPRERWFRPGTVPDADFPGGAATRTQLVDGACVFLRRGARGCSLHAF
                     ALARGQDYHAIKPMVSALFPVTFGEGVLLCSEELVDGSLVCAGPGPTAYEMARDELAY
                     YFGAELVAELDAYAQSRASSV"
     gene            complement(730..1170)
                     /locus_tag="VFN38_17460"
     CDS             complement(730..1170)
                     /locus_tag="VFN38_17460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013617.1"
                     /translation="MTEKKRRPAKKRPGSPNKSPYFMQPARQGTVTVFRRPAGNRIDP
                     KLCGTMNSRALALALVKQLEKAESVVHDLFLEATDDGIEALEAVLEACRQSVARRAEQ
                     IGTPGTPGSAGPKARRGRGRRKGGSPRGPASGPPSGGTEDTSAA"
     gene            1352..1909
                     /locus_tag="VFN38_17465"
     CDS             1352..1909
                     /locus_tag="VFN38_17465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative metal-dependent hydrolase"
                     /protein_id="HET9013618.1"
                     /translation="MTISATTSATDPDLRYPIGRPDRKPSLTADERRAAIDALAVAPA
                     QLRAAVAGLSDPQLDTPSRPDGWTVRQLVHHVADSHLNAYTRFRLALTEDNPTIKPYD
                     EKGWAELPDTRAMPVAVSLDLLDRLHERLVFVLRKTPDAAFARTLTHPENGPMTVDAL
                     LGIYSWHGRHHTAHVTALRARMKWA"
     gene            1906..>2423
                     /locus_tag="VFN38_17470"
     CDS             1906..>2423
                     /locus_tag="VFN38_17470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013619.1"
                     /translation="MTTLARRIGACALAAGAAACAREATPASDSTVVATATRSPIVIG
                     ITGKPACPATGHWSECAVLKRLEAAGVAPQKAASLPDLPPMGPTPMLFTVGRSGLAVY
                     LFADSAARARAARALDTTRYIGAAKELTMRGETTAIQSDNLLALLFSRNEQQRERVSD
                     ALTAGPPQPEHP"
BASE COUNT          333 a          953 c          824 g          313 t
ORIGIN      
        1 cggggatcac cgtgcagcgt gaggaggcga tgcgcatcct caagtcgctg ccggacgccg
       61 ccgggcccgc ggcattcctt gcccgcattc gcgaggagca gcagaccggg cgcactcccg
      121 caggcgggat cgcgcgtcag acgctcgaag cgcgcgactg agcgtacgcg tcgagctccg
      181 cgacgagctc cgcgccgaag tagtacgcca gctcgtcgcg cgccatctcg tacgccgtgg
      241 gccccggacc ggcgcacacg agcgagccgt ccaccagctc ttccgagcag aggagcaccc
      301 cttccccgaa ggtcacggga aacagcgcgc tcaccatcgg cttgatcgcg tgatagtcct
      361 ggccgcgcgc gagggcgaag gcgtgcagcg agcacccgcg tgcaccgcgc cgcaggaaga
      421 cgcaggcgcc gtccaccagc tgcgtccgag tcgcggcgcc gcccggaaag tccgcgtccg
      481 gcaccgtgcc gggcctgaac catcgctcgc gcggtacccc gacgatcggc tcgagctcgt
      541 cggcgtgcgc gaggatgcgg tcgcgctcgc ccacgtcgac gtccacaccg tgctggcagc
      601 agccgtcgtt gcagaagccg cacttcaggc agagcccgaa gtagcgtcgc tcgaacagcg
      661 cgggatccac gcggcggatc atcggcgcgc cgccgcgcgc cgcgtagtcg cgcgagaggg
      721 ggaggctcgt caggcggcgc tcgtgtcttc ggtgccgccg gaggggggac ccgaggccgg
      781 accgcggggc gatcctccct tgcggcggcc gcggccgcgc cgcgccttcg ggcccgcgct
      841 gcccggcgtg ccgggcgtgc cgatctgctc ggcgcgccgc gccaccgact gccggcaggc
      901 ctccagcacc gcctccagcg cctcgatgcc gtcgtcggtg gcctcgagga agaggtcgtg
      961 aaccaccgac tccgccttct ccagctgctt caccagtgcc agcgccaggg cgcggctgtt
     1021 catcgtcccg cagagcttcg ggtcgatccg gttgcccgcc ggacgccgga agacggtgac
     1081 cgtcccctgc ctggcgggct gcatgaagta cggcgacttg tttgggctgc cgggccgctt
     1141 cttcgcgggt cggcgcttct tctcggtcat ggcgcgagcg tccgcgtgtg cacagaggta
     1201 aacgtatgcc gggtcacgtt gtagcgggag gtccgccgcc cagcaggcga cgaatgcggc
     1261 ccgcccgccg tcacgctccc gctctcgcgc gcgccggccc ggcgtgaata gcttgcgagg
     1321 tccgcgccgt cgtcccctcg tcccgccgac catgaccatc tccgccacca cgtccgccac
     1381 cgaccccgac ctccgctacc cgatcggccg gccggaccgc aagccgtcgc tcacggccga
     1441 cgagcggcgc gccgccatcg atgccctggc cgttgcgccg gcgcagctgc gcgccgcagt
     1501 cgccggcttg agcgatcccc agctcgacac cccctcccgc cccgacggct ggacggtgcg
     1561 gcagttggtg caccacgtgg ccgacagcca cctgaacgcg tacacccgct tccgcctcgc
     1621 cctcaccgag gacaacccca ccatcaagcc ctacgacgag aagggttggg cggagctccc
     1681 cgacacgcgc gcgatgccgg tcgcggtctc cctcgacctg ctcgaccggc tgcacgagcg
     1741 gctcgtcttc gtcctgcgga agactcccga cgccgccttc gcgcgcacgc tcacgcatcc
     1801 cgagaacggg cccatgaccg tggacgccct gctcggcatc tactcgtggc acgggcgtca
     1861 ccacacggcg cacgtgaccg cgctgcgcgc gcgcatgaag tgggcatgac gacgctggcg
     1921 cggcgcatcg gcgcgtgcgc gctcgccgcc ggcgccgcgg catgcgcgcg cgaggccact
     1981 cccgcgtccg acagcaccgt ggtcgccacc gccacacgca gccccatcgt catcgggatc
     2041 accggcaagc cggcctgtcc cgccacgggg cactggagcg agtgcgcggt gctcaagcgc
     2101 ctcgaggccg cgggcgtcgc gccgcagaag gccgcgtcgc tgcccgacct gccgccgatg
     2161 ggaccgacac cgatgctctt caccgtcggc cggtccggtc tcgcggtcta cctgttcgcc
     2221 gattccgcgg cgcgggcccg cgccgcgcgg gcgctggaca ccacccggta catcggggcg
     2281 gcgaaggagc tcaccatgcg cggcgagacg accgccatcc agagcgacaa cctgctcgcc
     2341 ctgctgttca gccggaacga gcagcagcgc gagcgcgtct cggatgcgct caccgccggc
     2401 ccgccccagc cggagcaccc gtg
//
LOCUS       DASSYW010001106         2141 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1725229, whole genome shotgun sequence.
ACCESSION   DASSYW010001106 DASSYW010000000
VERSION     DASSYW010001106.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2141)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2141)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2141
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1725229"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(69..1403)
                     /gene="miaB"
                     /locus_tag="VFN38_17475"
     CDS             complement(69..1403)
                     /gene="miaB"
                     /locus_tag="VFN38_17475"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR01574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016782 - transferase activity,
                     transferring sulphur-containing groups [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HET9013620.1"
                     /translation="MSSEQRPTVYVETYGCQMNVSDSELMLGKLASAGYAPVDRPDGA
                     DVILVNTCAIRDHAEQRVIGRLGELKRHMKPDTVMGVTGCMAQRLGPALLEKARHVSL
                     VIGPDGYRALPALVDGARRGERAIATTFDLEEHYEDFAPRRFDRVKAWIPVQRGCDYR
                     CTYCIVPTTRGSERSRRLEDVIREVEGVVAEGMSEVVLLGQTVNSYTDGRHDFADLLR
                     RTGSVPGVRRVRFTSPHPNDFSDRVIAAIAEVPTVCEHVHLPMQSGSTRTLKRMLRRY
                     TREEYFDCVARLRAAVPHLALTTDVIVGFPGETDEDFEETLSAVEAIGFVDAYTFIFS
                     PRDGTPATRLPAELTVPEDVASERLQRLVSLVRAGARRRNLGLLGTRHEVLVEREAKR
                     GEAMLMTRTRDFKTVLVPGDESMLGTYLTVELTGTTGSTFTGAIVAPALAVL"
     gene            complement(1413..>2141)
                     /locus_tag="VFN38_17480"
     CDS             complement(1413..>2141)
                     /locus_tag="VFN38_17480"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HET9013621.1"
                     /translation="VLTGVHIGGWGREHADSLGALVERLVRDVPHVRFRLTSIEATEV
                     DDRLAEMLVGAPGRVAPHLHAPLQSGSDRLLRRMGRHWYTAARYAAAVERLASRAPVF
                     ALAADVITGFPGERDEDHAGTVALVRALPFTSLHVFPYSPRPGTAASRLPDPVPARIA
                     RARASELRDLAAAKAADHRRARAGGRADVVVLRAGESARGLTEDYLDVALGVGAPPRA
                     CRYDAVLVTEGDELRAEAPAPDPS"
BASE COUNT          317 a          783 c          740 g          301 t
ORIGIN      
        1 gaactccggg aaccgcggcc gacgcgactc gtacgaggac cggacgtgct cctcgacccg
       61 ggtgtgagtc acaggaccgc cagggctggc gcgacgatcg cgccggtgaa cgtggagccc
      121 gtcgtgccgg tgagctccac ggtcaggtac gtgccgagca tggactcgtc tcccggcacg
      181 agcacggtct tgaagtcacg ggtgcgcgtc atgagcatcg cctcgccgcg cttcgcctcg
      241 cgctcgacga ggacttcgtg gcgcgtgccg agcaggccga gattccgccg ccgcgcaccg
      301 gcacgcacga gcgacacgag ccgctggagc cgttcgctcg ccacgtcttc cgggacggtg
      361 agctcggcgg ggagccgcgt ggccggcgta ccgtcgcgcg gcgagaagat gaacgtgtac
      421 gcgtcgacga aaccgatcgc ctccacggcg ctcagcgtct cctcgaagtc ctcgtccgtc
      481 tcgcccggga agccgacgat cacgtcggtc gtcagcgcga gatgcggcac cgccgcacgc
      541 agccgcgcca cacagtcgaa gtattcctcg cgcgtgtacc ggcgcagcat gcgcttgagc
      601 gttcgtgtcg agccgctctg catcgggaga tgtacgtgct cgcacaccgt cggcacctcg
      661 gcgatcgcgg cgatcacccg gtcgctgaag tcgttcggat gcgggctggt gaatcgcacc
      721 cggcgcacgc ccggcaccga gcccgtacgc ctcaacagat cggcgaagtc gtgtcgcccg
      781 tcggtatagg aattcaccgt ctggccaagc agcacgactt cgctcatccc ctcggccacg
      841 acgccttcca cctctcggat cacgtcctcg aggcgccggc tgcgctcgga gccgcgcgtc
      901 gtgggcacga tgcagtacgt gcaccgatag tcgcagccgc gctgcacggg gatccacgcc
      961 ttcacgcgat cgaatcgacg cggcgcgaag tcctcgtagt gctcctcgag atcgaacgtg
     1021 gtggcgatgg cgcgctcgcc gcgccgcgcg ccatccacca gcgccggcag cgcgcgatac
     1081 ccgtccggac cgatcacgag cgagacgtgg cgcgccttct cgagcagcgc gggcccgagc
     1141 cgctgggcca tgcacccagt cacccccatc acggtgtccg gcttcatgtg ccgcttgagc
     1201 tcacccagcc ggccgatcac gcgctgctcg gcgtggtcgc ggattgcgca cgtgttcacg
     1261 aggatcacgt ccgcgccatc cggccgatcg accggcgcat agccggcgct cgcgagcttg
     1321 ccgagcatca gctcggagtc gctcacgttc atctgacagc cgtacgtctc gacgtagacg
     1381 gtcgggcgct gctcggaaga catcctcgaa atctagctcg ggtcgggcgc gggcgcctcg
     1441 gccctcagct cgtcgccctc cgtcacgagc accgcgtcgt agcggcaggc ccgtggcggc
     1501 gcgcctactc ccagcgcgac gtcgaggtag tcctccgtga gcccacgcgc ggattcgcca
     1561 gctcggagca cgaccacatc cgctcggccg ccggcccgcg cacgtcggtg gtcggccgct
     1621 ttcgcggccg ccaggtcacg aagctcgctc gcccgcgcgc gggcgatgcg ggcgggcacc
     1681 ggatcgggga gcctcgacgc cgccgttccc ggtcgcggcg agtacgggaa gacgtggagc
     1741 gatgtgaagg gcagcgcacg gacgagcgcg accgtgccgg catgatcctc gtcgcgctcg
     1801 ccggggaacc cggtgatcac gtcggcggcg agcgcgaaca ccggcgcgcg cgacgcgagc
     1861 cgctcgacgg cggcggcgta gcgcgccgcg gtgtaccagt ggcggcccat gcggcggagc
     1921 agccggtcgg acccggactg cagcggcgcg tgcagatgcg gcgcgacccg gcccggtgcg
     1981 cccaccagca tctcggcgag ccgatcgtcc acttcggtcg cctcgatcga ggtcagacgg
     2041 aatcgaacgt gcggcacgtc gcgcacgagc cgctcgacga gcgcgccgag cgagtcggcg
     2101 tgctcgcgcc cccatccgcc gatgtgcacg cccgtgagga c
//
LOCUS       DASSYW010001107         2565 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1430717, whole genome shotgun sequence.
ACCESSION   DASSYW010001107 DASSYW010000000
VERSION     DASSYW010001107.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2565)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2565)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2565
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1430717"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..252
                     /locus_tag="VFN38_17485"
     CDS             <1..252
                     /locus_tag="VFN38_17485"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HET9013622.1"
                     /translation="MSMGRPTAATAAGGIPEIVVDGVSGLLAPVHDAEQLGEAIARLF
                     TDRALAARLSAGARARAAEFSVERTAERTLAVYRRVLGA"
     gene            257..1834
                     /locus_tag="VFN38_17490"
     CDS             257..1834
                     /locus_tag="VFN38_17490"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HET9013623.1"
                     /translation="MRRASALCVLAAAVACGPRLRGAAIPGTSAAGAPPSAAELRRDL
                     EVFASDSFNGRRTGTDDARRAADFLAARLALLGVEPAGDSGYFQRVPLVRQGPGPDAR
                     YEVRGPSGTVRLPAGEALLPMPTPIGADALPADRAEGDVAFVGYAIAGTGVAQRDDEG
                     LDIAGKVAVLVGGAPPGSPRHRRGAPDAPAEMGRRVQALIARRPAAIIVLLAGENAKS
                     VEQLARQYQRIAAAGDLASAPPDSLRTLPMLLLGDAARAAALLPDGWPGDARPQLLAG
                     KRFSGTSDLRVTAVNVVGIVRGRDPALRSTYVAYGAHYDHIGVQSLAMAQASEAGATP
                     SDTIANGADDDGSGSVTLLAVARAFQQGPRPRRSVLFVWHVGEEQGLLGSSYFAAHPT
                     VPLDSVVAQLNADMIGRNAPDSLYVVGPLAAPKGQSRRLGEVVDSVNAALRTPFRINR
                     EWDSPTHPEQIYYRSDHFSYARRGIPIVFFTSGLHEDYHRVSDEAAKIDYDKLAHVGT
                     LLLEVGRAVGERTTGLK"
     gene            1962..>2565
                     /locus_tag="VFN38_17495"
     CDS             1962..>2565
                     /locus_tag="VFN38_17495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013624.1"
                     /translation="MILANVRQRLGRDDAQLVLRLVARGNAEEYERAEDALRDQGIDA
                     LLDDPRLIGALLESPQGARASFPLFAYVVVRNALRQAGEGDRVLADYAAAILLHFGLK
                     DAAHRVGAADDEVYTTLADLLRDVESADARRSFLVRAHLGNYALWLSGLFPDHIESRR
                     WRRGGPDLEYYEEMGRRGFQLAAGHRLASEHGLEALYSAAA"
BASE COUNT          314 a          961 c          946 g          344 t
ORIGIN      
        1 atgtccatgg ggcggcccac ggcggccacg gcggcggggg gcattcccga gatcgtcgtc
       61 gacggcgtct ccgggctcct cgcgccggtc cacgacgccg agcagctcgg ggaggcgatc
      121 gcgcggctgt tcaccgatcg cgcgctggcc gcgcgcctct cggcgggcgc gcgcgcgcgg
      181 gcggccgagt tctcggtcga gcgcacggcc gagcggacgc tcgccgtcta ccgccgcgtg
      241 ctcggcgcct gacgtgatgc gtcgcgcctc cgcgctctgc gtcctcgcgg ccgccgtcgc
      301 ctgcgggccg cggctccgtg gcgcggccat tccgggcacg agcgcggcgg gcgcgccgcc
      361 gtcggccgcc gagctgcggc gcgacctcga ggtgttcgcc tccgactcct tcaacggacg
      421 gcgcaccggc accgacgacg cgcgccgggc ggcggacttc ctcgccgcgc ggctggcctt
      481 gctcggcgtc gagccggccg gcgacagcgg ctacttccag cgcgtgccgc tggtgcgcca
      541 ggggcccggc cccgacgcgc gctacgaggt gcgcggcccg tcgggcacgg tgcgtctgcc
      601 ggccggcgag gcgctgctgc cgatgccgac gccgatcggc gccgacgcgc tccccgccga
      661 ccgcgccgag ggggacgtcg cgttcgtcgg ctacgcgatc gcggggaccg gcgtggcgca
      721 gcgcgacgac gagggactcg acatcgccgg gaaggtggcg gtgctggtgg gcggcgcgcc
      781 gccgggaagt ccgcggcacc ggcggggcgc gcccgacgca ccggcggaga tgggacgccg
      841 cgtgcaggcc ctcatcgccc ggcgtccggc cgccatcatc gtgctcctcg cgggggagaa
      901 tgcgaagagc gtggagcagc tggcgcgaca gtaccagcga atcgccgccg ccggcgatct
      961 ggcctccgcg ccccccgact cgcttcgcac gctccccatg cttctcctcg gcgacgcggc
     1021 gcgggcggcg gcgctgctcc ccgacggctg gcccggcgac gcgcggccgc agttgctcgc
     1081 ggggaagcgc ttcagcggta cgagcgacct gcgcgtgacg gcggtcaacg tcgttggcat
     1141 cgtgcgcgga cgcgaccccg cgctgcgctc gacgtacgtc gcctacggcg cacactacga
     1201 ccacatcggc gtgcagtcgc tggccatggc gcaggcgtcc gaggccggcg cgacgccgtc
     1261 ggacacgatc gccaacgggg ccgacgacga cggctcgggc agcgtgacgc tgctcgccgt
     1321 cgctcgcgcc ttccagcagg ggccgcgccc tcgccgctcg gtgctcttcg tctggcacgt
     1381 cggcgaggag caggggctgc tcggctcgtc gtacttcgcc gcccacccga ccgtgccgct
     1441 cgactcggtg gtcgcgcagc tcaacgccga catgatcgga cgcaacgccc ccgactcgct
     1501 ctacgtggtg gggccgctgg cggcgccgaa gggacagagc cgccggctcg gcgaggtcgt
     1561 ggattcggtg aacgcggcgc tgcgtacgcc cttccggatc aaccgcgagt gggactcgcc
     1621 gacgcatccc gagcagatct actatcgcag cgaccatttc agctacgcgc gccgcggcat
     1681 tccgatcgtc ttcttcacga gcggtctgca cgaggactac caccgcgtca gcgacgaggc
     1741 ggcgaagatc gactacgaca agctcgccca cgtcggcacg ctgctgctcg aggtcgggcg
     1801 cgcggtcggg gagcggacga ccggcctgaa ataggggacg gggcgcttct ccgtgccccg
     1861 tacgcctctc gctcgtcaca cctatggacc ccgcaacggc cacggcacgc cgctggcgtt
     1921 acaggggtag atggcagtgt gaccagtttg cggaggatcc ggtgattctt gcgaacgttc
     1981 ggcagcgtct gggacgtgac gacgcgcagc tcgtgctgcg cctggtcgcg cgggggaacg
     2041 ccgaggagta cgaacgtgcc gaggacgcgc tgcgcgacca gggaatcgac gcgctgctcg
     2101 acgacccgcg gctgatcggt gcactgctcg agtcgccgca gggggcgcgc gcttccttcc
     2161 cgctcttcgc ctacgtcgtc gtccgcaacg cgctgcggca ggcgggggaa ggggaccgcg
     2221 tgctcgccga ctacgccgcg gccatcctcc tgcacttcgg cctcaaggac gcggcccacc
     2281 gcgtcggcgc cgcggacgac gaggtgtaca cgaccctcgc cgacctgctg cgcgacgtcg
     2341 agagcgccga cgccaggcgc agcttcctcg tccgcgccca cctcggcaac tacgcgctct
     2401 ggctgagcgg gctctttccc gaccacatcg agtcgcgtcg ctggcggcgc ggcggccccg
     2461 acctcgagta ctacgaggag atggggcgcc gcggcttcca gctcgcggcc ggccatcgcc
     2521 tggcgtccga gcacggcctc gaggcgctct actcggcggc cgccg
//
LOCUS       DASSYW010001108         2896 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1791275, whole genome shotgun sequence.
ACCESSION   DASSYW010001108 DASSYW010000000
VERSION     DASSYW010001108.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2896)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2896)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2896
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1791275"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..370
                     /locus_tag="VFN38_17500"
     CDS             <1..370
                     /locus_tag="VFN38_17500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013625.1"
                     /translation="EAFPIGIDTTISVVPIEVSAGWRFTDPRRTVIPYLGGGVSWHRY
                     KETSEFATADDDVQFTKPGFQLLGGAEWRASRWLGIAGEAAWMMVPNAFEGGPTSAAA
                     AFGEDDLGGAVFRVKVIIGR"
     gene            367..705
                     /locus_tag="VFN38_17505"
     CDS             367..705
                     /locus_tag="VFN38_17505"
                     /inference="COORDINATES: protein motif:HMM:NF013222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MGMT family protein"
                     /protein_id="HET9013626.1"
                     /translation="MKNFRARVLKAVRSIPRGRVATYGDIAELVGAPGAARAVGNVMR
                     GCGDPSVPCHRVIAAAGGLGGYGGNLERKRQLLRAEGLEVTPTRIRGFAAVRWPVQAR
                     AATRARRGPV"
     gene            715..1284
                     /locus_tag="VFN38_17510"
     CDS             715..1284
                     /locus_tag="VFN38_17510"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HET9013627.1"
                     /translation="MRADDLELARRCREGDAAAFETLYRVHAGRLFGLLTRMTGSAQD
                     AEDLLQDVFVQAHRKLASFRGESSLGTWLYRLAVNQCLDSLRSKQSRMARTTDSLDAE
                     DAHEPAAAAPALPEAIARIDLERAIAQLPEGCRAAFVLHDVEGLDHREVGAALGISEG
                     TSKSQVHKARMKLRVLLRGAVPRGALEAV"
     gene            1284..1979
                     /locus_tag="VFN38_17515"
     CDS             1284..1979
                     /locus_tag="VFN38_17515"
                     /inference="COORDINATES: protein motif:HMM:NF024881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HET9013628.1"
                     /translation="MSNEPILHCERVPDVLDDYLAGHLAAATSAAFDAHLAACPACQA
                     LVADVRAIRSVARTLGPIEPPEHVWRHVRARVSMEAPPRTSLLDRLGFSGFQPLAAAA
                     ALALVVSGLSWVGVRLRDTPAAPSNAEGAVVLPEFELAESEYTDAIARLEEAADAARP
                     RLDALTSETLRSSIDDIDIAIGDARDALARAPGDALSQESLLDALGSKVALLQDTVAM
                     LGDLEPATEEQIQ"
     gene            2006..>2896
                     /locus_tag="VFN38_17520"
     CDS             2006..>2896
                     /locus_tag="VFN38_17520"
                     /inference="COORDINATES: protein motif:HMM:NF024743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4097 family beta strand repeat-containing
                     protein"
                     /protein_id="HET9013629.1"
                     /translation="MAAAIMAGTVPPAHAQDDRTERGRQRAEEVQRRREALRARQEKL
                     RRARQEMRRGPMATEPFTALAKLGRQGTLTLVNGAGNVTITGSGGTDVRIDAVKRVWD
                     RSAADARSALAGIQINVTERQGTVDVSTDFERSRRIHEVDFTIAVPAGANVSVRTASG
                     DVTVTGVRGELRAEAVGGAIKAASLGQVRMLRTLGGSISLENADSSDVTISTLGGAVT
                     IRQLKARSADLRTVAGDLVVTDSDAERVIAQSLSGRVEFSGRLARTGRYSLQSQSGDV
                     QLTPIDTKDFELEAATINGTV"
BASE COUNT          438 a          998 c         1069 g          391 t
ORIGIN      
        1 cgaggcgttt ccgatcggca tcgacacgac gatctcggtc gtgccgatcg aagtctcggc
       61 cggctggcgc ttcaccgatc cgcgccggac ggtgattccc tatctcggcg gcggcgtgag
      121 ctggcaccga tacaaggaga cgtccgagtt cgccacggcc gacgacgacg tgcagttcac
      181 caagccgggg ttccagctgc tcggcggcgc cgaatggcgt gcgtcgcgct ggctggggat
      241 tgccggcgag gccgcgtgga tgatggtgcc gaacgcgttc gagggtggac cgacgagcgc
      301 ggccgcggcc ttcggggaag acgaccttgg cggcgcggtc ttccgcgtga aagtgatcat
      361 cggccgttga agaacttccg ggcccgcgtg ctgaaggccg tgcgctcgat tccacggggc
      421 cgcgtcgcga cctacggcga catcgccgaa ctggtggggg ccccgggcgc ggcccgcgcc
      481 gtcggcaatg tgatgcgcgg ctgcggcgac ccgtccgtcc cctgccaccg ggtgatcgcc
      541 gcggccgggg ggctgggtgg ctacggcggc aatctcgagc gaaaacgcca gctgctccgg
      601 gccgaagggc tcgaagtgac ccccacccgt attcgcggct ttgccgccgt gcgctggccc
      661 gtgcaggccc gcgcggcaac cagagcccgg cgaggccccg tctaaggatc agacgtgaga
      721 gccgacgacc tcgagctggc gcgccggtgc cgcgagggcg atgcggcggc gttcgagacg
      781 ttgtaccggg tccatgccgg gcggctcttc gggctgttga cgcgcatgac gggatccgct
      841 caggacgccg aggacctcct ccaggacgtg ttcgtccagg cccaccgaaa gctcgccagc
      901 ttccgcggcg agtcgagcct cggcacctgg ctctaccggc tggccgtcaa ccagtgcctg
      961 gattccttac ggagcaagca gtcgcggatg gcgcgcacca ccgattctct ggacgccgag
     1021 gacgcgcatg aaccggccgc ggccgccccg gcgttgcccg aggcgatcgc gcgcatcgat
     1081 ctggaacgcg cgattgcgca gctccccgag gggtgccgcg ccgccttcgt gctccacgac
     1141 gtcgaggggc tggaccaccg cgaggtggga gcggcgctcg gcatttcgga aggcacctcg
     1201 aaatcgcagg tgcacaaggc gcgcatgaag ctgcgcgtgc tgctgcgcgg ggcggtgccg
     1261 cgcggagcgc tcgaggcggt gtgatgagca acgaacctat cctccactgc gagcgcgtgc
     1321 ccgacgtgct cgacgactac ctcgccggac acctggcggc ggcgacgtct gcggcgttcg
     1381 acgcgcatct ggcggcgtgc ccggcatgcc aggcgctggt ggcggacgtc cgcgccatcc
     1441 gctcggtggc gcgaacgctc ggaccgatcg agccgcccga acacgtgtgg cgccacgtgc
     1501 gcgcgcgcgt cagcatggag gcgccgccgc ggacatccct gctggatcgc ctcgggttct
     1561 cgggctttca gccgctggcc gccgccgcgg cgctcgccct ggtggtgtcg ggcctctcgt
     1621 gggtcggcgt gcggctgagg gataccccgg cggccccgtc gaatgcggag ggcgccgtcg
     1681 tgctgcccga gttcgagctc gccgagtcgg aatacaccga cgcgatcgcg cggctcgagg
     1741 aagcggccga cgccgcccgc ccgcggctcg acgcgctcac gagcgagacg ctgcgctcga
     1801 gcatcgacga catcgacatc gcgatcggcg acgcgcgcga cgcattggcg cgcgcaccgg
     1861 gcgacgcgct gtcgcaggaa agcctgctcg acgctctcgg aagcaaggtg gccctgctcc
     1921 aggacacggt ggccatgctc ggcgacctcg agccggccac ggaggaacag atccaatgag
     1981 gattgcggga cgagtggcgg ctgtgatggc cgccgccatc atggcgggaa cggtgccgcc
     2041 ggcacacgcc caggacgatc gcaccgagcg cgggcgccag cgggcagaag aagtgcagcg
     2101 ccggcgcgaa gcgctgcggg cacggcagga aaaactgcgc cgcgcccgtc aggagatgcg
     2161 gcgcggcccc atggccaccg aaccctttac cgccttggca aagctcggcc ggcagggcac
     2221 gctcacgctg gtcaacgggg cgggcaacgt gacgatcacc ggcagcggag gcaccgacgt
     2281 ccgcatcgac gccgtcaagc gggtctggga ccgcagcgca gccgacgcca ggtccgccct
     2341 ggccggaatc cagatcaacg tgaccgaacg tcagggcacc gtggacgtca gcaccgattt
     2401 cgagcgttcg cgccggatcc acgaagtgga tttcacgatc gcggtgcccg cgggcgccaa
     2461 cgtgtcggtg cgcacggcgt cgggcgacgt gaccgtcacc ggcgtccggg gcgagctgcg
     2521 cgccgaggcg gtgggcggcg ccatcaaggc ggcatcgctc gggcaggtgc gcatgctgcg
     2581 cacgctcggg gggagcatct cgctcgaaaa cgccgacagc tccgacgtga ccatctcgac
     2641 gctcggcggg gcggtgacca tacgccagct caaggcgcgg tcagccgacc tgcgcacggt
     2701 cgccggcgat ctcgtggtga ccgacagcga cgccgagcgg gtgatcgcgc agtcgctcag
     2761 cggccgcgtg gagttctcgg gccgcctggc acggacaggc cgctattcgc tgcagtcgca
     2821 gtcgggcgac gtgcagctga cgcccatcga cacgaaggac ttcgagctcg aggcggcgac
     2881 catcaacggc accgtg
//
LOCUS       DASSYW010001109         3609 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_472736, whole genome shotgun sequence.
ACCESSION   DASSYW010001109 DASSYW010000000
VERSION     DASSYW010001109.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3609)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3609)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3609
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_472736"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            89..592
                     /locus_tag="VFN38_17525"
     CDS             89..592
                     /locus_tag="VFN38_17525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013630.1"
                     /translation="MKHLHLAIAVSALLGTATAALSQPAAGPPWPEQSYRVEWSEAHV
                     PAEVAAGIRVAVPVAVRNDGDRVWPASQVFVSYHWFRDDRLIVWDGERTVLPRDLRAG
                     SRAALSARVTTPSEPGAYVLKLTLVHELVTWFEHRGAAMHIQPVSVRPPAPLSSCGGS
                     TPCAARQ"
     gene            574..1740
                     /locus_tag="VFN38_17530"
     CDS             574..1740
                     /locus_tag="VFN38_17530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013631.1"
                     /translation="MRGQAVSTIIVAGMIAGDPYQGGATWAVLQYLLGLRQAGHDVYF
                     IEPVTAAKLQPGGASLPESRNAAYFRAVAQQFDLEARAALLLAGTTRTVGLPYDRLRA
                     VAATSDCLINISGMLTDPALTESIPVRVYLDLDPGFNQLWSAAEGIDVGFGGHTHFVT
                     IGPALGDAGCDIPTCGHSWIATRQPVVLSEWPRAERLTYDAFSTVANWRGYGSITYNS
                     VFYGQKAHAWRGLMSLPDKTPEPFVVALAIHPDEQRDLALLAAHGWTLIDPAQVTATP
                     EGYRAFVQGSKGEIGVAKSGYVASRCGWFSDRSACYLASGRPVVAQETGFSRFLPTGE
                     GLFAFETADDASAAIAAIVGDYERHSRAARAIAEEYFDASRVLPQLLERVGVHG"
     gene            1737..2813
                     /locus_tag="VFN38_17535"
     CDS             1737..2813
                     /locus_tag="VFN38_17535"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside phosphotransferase family
                     protein"
                     /protein_id="HET9013632.1"
                     /translation="MNIPMNTAQPAPVLRADAARRRSPQRPELSVAMTTLFGPARASR
                     IVDVDAWPMPYASSFLIDEVRVRFDDGSTLALVCKGTGKAAMLPEARRIKPRFIHHPL
                     REIATYERILAPFGAGAPRFYGSVVNRQRGDYWLFLERVRGVPLTEVGDFAVWRHVSA
                     WLGEVHARLARDPGLADAAALVPLVRYDRANARVWMERAQQHLEGDVVRPRAIRRRFA
                     SLASRYDVFLDELAALPSGFVHGEFFAANVLVEITAGLRRVRPVDWELAGVGPMLMDL
                     AALTAGSWTESERADLAASYQRASAHEPRTARSHDSFMRALDCCRLQLAVQRLGWARQ
                     WTPPATHRQDWLGEALSIAERLGL"
     gene            2828..>3609
                     /locus_tag="VFN38_17540"
     CDS             2828..>3609
                     /locus_tag="VFN38_17540"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HET9013633.1"
                     /translation="MTRSTRIAFLVLLALWWTAPGVVAQRAAGVRGVVTDETGGLIVG
                     AAVTLTDERGTKATAVTDQEGRYQVVTRSPGKATVTVAAAGFAPSSRDVVVAGAGGTT
                     VDVKLRVAIIDRVVVQGGLLGVSLDSDQNLSGVRLSGRALDALPNDPESLIQSLRLLA
                     ASAGTRPDQVTFYVDGLPLTQRLPPKDVIQSVRINANPFSAEFAEPGTSRVEILTKPA
                     SGQYRGSGRVDFNDARLNAQDPFQPYRADYQSRSFEGYAGGP"
BASE COUNT          515 a         1234 c         1280 g          580 t
ORIGIN      
        1 cgggcgaaca gaatcgcccg gcatccgctc ttcaacaaca cgatcttcgt ggtggccacg
       61 cgataggcga cgggacttgg aggcacgcat gaagcacttg catctcgcga tcgccgtgtc
      121 ggcgctgctc ggaaccgcga cagccgctct gtcgcagccg gcggcggggc cgccatggcc
      181 agaacagtcg tatcgtgtcg aatggtcgga ggcgcacgtc ccggcggagg tcgccgccgg
      241 catccgggtc gcggtcccgg tcgccgtgcg aaacgacggc gaccgggtct ggcctgcctc
      301 gcaggtcttc gtgtcgtacc actggtttcg cgacgatcgc ctgatcgtgt gggacgggga
      361 gcgcacggtg ttgccgcgcg acctgcgagc cggcagtcga gcagcgctgt cggctcgcgt
      421 gaccacgccc tcggaaccgg gcgcctacgt gttgaagctg acgctcgtgc acgagctcgt
      481 cacgtggttc gagcaccggg gtgccgcgat gcacatccag cccgtctcgg tgcgcccccc
      541 ggcgccgttg tcctcgtgcg gcggttccac tccatgcgcg gccaggcagt gagcaccatc
      601 atcgtcgccg ggatgatcgc gggcgatccc taccagggcg gcgcgacgtg ggcggtgctc
      661 cagtacctgc ttggcctgcg acaggccggg cacgatgtct atttcatcga gccggtcacg
      721 gccgccaagc tccaaccagg cggtgcgagc ctgccggagt cgaggaacgc cgcctacttc
      781 cgcgccgtgg cgcagcagtt cgatctcgag gctcgcgcgg cgctgctgtt ggccggcacg
      841 acgcggaccg tgggcctgcc gtatgaccgc ctgcgcgccg tggcggccac gagcgattgc
      901 ctcatcaaca tttcgggcat gctcacggac ccggcgctca ccgaatcgat ccccgtgcgc
      961 gtgtatctcg atctcgaccc cggcttcaat caactctgga gtgccgccga gggcatcgac
     1021 gtgggattcg gcggccacac gcacttcgtg accatcggcc ccgcgctcgg cgacgcgggc
     1081 tgcgacattc cgacctgcgg tcacagctgg attgccacgc gtcaacctgt cgtgctcagc
     1141 gaatggccgc gtgccgagcg cctcacctac gacgccttca gtacggtggc caactggcga
     1201 ggctacggct ccatcaccta caacagcgtc ttctatggac aaaaggcgca cgcctggcgc
     1261 ggtctgatgt cgctgccaga caagacgccc gagccgttcg tcgtggcgct ggcgatccac
     1321 cccgacgagc agcgggatct ggcgcttctg gccgcgcacg gctggacgct gatcgatccc
     1381 gcgcaggtga cggccacgcc ggagggctat cgggcgttcg tgcaagggtc gaagggcgag
     1441 atcggggtcg ccaagagcgg ctacgtcgcg tcgcgctgcg gctggttcag cgatcgcagc
     1501 gcctgctatc tcgcctccgg ccgccctgtc gtggcgcagg aaaccgggtt cagccggttc
     1561 ctcccgaccg gcgaggggtt gttcgcgttc gagacggcgg acgacgcgtc cgcggcgatc
     1621 gccgccatcg tcggcgacta cgagcggcat tcgcgcgccg cgcgtgcaat cgccgaggag
     1681 tatttcgatg cttcgcgcgt gttgccccag ctcctcgagc gcgtcggggt gcacggatga
     1741 acatcccgat gaacacggcc cagccggcgc ccgtgctccg ggccgacgcg gcccggcggc
     1801 gctcgcctca gcggcccgaa ttgagcgtcg ccatgaccac gctgttcggc cccgcgcgtg
     1861 cgtcgcggat cgtcgacgtc gacgcctggc cgatgccata tgcgtcgagc ttcttgatcg
     1921 acgaggtgcg cgtgcgattc gacgacggca gcaccctggc gctggtgtgc aagggcaccg
     1981 gcaaggcggc gatgctgccc gaggcgcggc gtatcaagcc gcgcttcatc caccatccgc
     2041 tccgcgagat cgccacctac gagcggatcc tggcgccgtt cggcgccggg gcgccccgct
     2101 tctacggcag cgtcgtcaac cggcagcgcg gcgactactg gctcttcctc gagcgcgtcc
     2161 gcggcgtgcc cctcaccgaa gtgggtgact ttgcggtctg gcgtcacgtg agcgcctggt
     2221 tgggtgaggt gcacgcgcgg ctcgcgcgcg atcccggcct ggcggatgcg gccgctctgg
     2281 tgccgctggt gcggtacgac cgggcgaacg cgcgcgtgtg gatggagcgc gcgcagcaac
     2341 acctcgaagg cgacgtggtg cggccgcggg cgatacgccg ccgctttgcg tcgctggcgt
     2401 cgcgctacga cgtgtttctc gacgagctcg ccgcgctgcc atcggggttc gtccacggag
     2461 agttctttgc cgcgaacgtg ctggtggaaa tcacggcggg cctgcggcgt gtgcgtccgg
     2521 tcgattggga gctcgccggg gtggggccga tgctcatgga cctcgcggcg ctcacggccg
     2581 gcagctggac tgagagcgag cgggcagatc tggcggccag ttatcagagg gcgtcagccc
     2641 atgaaccgcg gaccgcgagg tcgcacgaca gcttcatgcg ggcgctcgat tgctgccgcc
     2701 tgcagctcgc cgtccagcga ctgggctggg cgagacagtg gacgccgccg gcgacccacc
     2761 ggcaggactg gcttggcgag gcgctgtcca tcgccgagcg gctcgggctt tgagacacgg
     2821 tgcgggcatg acacgctcaa cacggatcgc gtttctcgtg cttctcgccc tctggtggac
     2881 cgcgccgggg gtcgtggccc agcgcgccgc gggagttcgc ggcgtcgtga ccgacgagac
     2941 cggcggcctc atcgtgggag ccgcggtgac gctgaccgac gaacgcggga caaaagccac
     3001 cgccgtgacc gaccaggagg ggcgctacca ggtggtcacg agaagccccg gcaaggcgac
     3061 ggtgacggtc gcggcggccg gcttcgcgcc ctcgagccgc gatgtcgtgg tggccggcgc
     3121 cggcggcacg acagtggacg tcaagctccg agtcgccatc atcgaccgcg tcgtcgtgca
     3181 gggcggcctg ctcggcgtct cgctcgattc ggatcagaac ctctccggcg tcaggttgtc
     3241 gggccgcgcg ttggatgcgc tgcccaacga tccggagtcg ctgatccaat cgcttcgtct
     3301 gttggcggcg tccgccggca cgcgtccgga ccaggtgacg ttctacgtgg acggcctgcc
     3361 gttgacgcag cggctcccac ccaaggacgt catccagagc gtgcggatca acgcgaatcc
     3421 gttttcggcc gagttcgccg agccgggcac cagccgtgtg gagatcctga ccaagccggc
     3481 gtcggggcag tatcgaggca gcgggcgggt cgacttcaac gacgcgcgac tgaacgcgca
     3541 ggacccgttt cagccgtatc gcgccgacta ccagagccgc agcttcgagg gctacgccgg
     3601 cggaccgat
//
LOCUS       DASSYW010001110         2336 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_620139, whole genome shotgun sequence.
ACCESSION   DASSYW010001110 DASSYW010000000
VERSION     DASSYW010001110.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2336)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2336)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2336
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_620139"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..542
                     /locus_tag="VFN38_17545"
     CDS             <1..542
                     /locus_tag="VFN38_17545"
                     /inference="COORDINATES: protein motif:HMM:NF015684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HET9013634.1"
                     /translation="PDRFIPARRAPAAAPTGAAAVAAQIQASPDADDQVRKARLAEAK
                     LRLEIAQRARNRYEIEIHKKFSLAAACLIFVLIGAPIAVRFPRGGVGLVIGVSLLVFA
                     LYYVGLIGGESLANEGIIPPFWAMWGTNVILTVVGIGLLLRMGNDSTSNRGGDWSDKL
                     DALLAKFGRGPQARLRSAP"
     gene            539..1624
                     /locus_tag="VFN38_17550"
     CDS             539..1624
                     /locus_tag="VFN38_17550"
                     /inference="COORDINATES: protein motif:HMM:NF015684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HET9013635.1"
                     /translation="MSLVRPLDKYVFVEWMKIFCSTAVGLPILLVIIDLTDHLQTYLT
                     RNIPRADIALSYVYWMPQSMFMALPAAVLFATVFSIGTFTRHSEITAAKASGISFYRL
                     VAPILVGAAFAAAADLVIGELVPITDARRNDLLRESKVQSGTQRSNFAYAAEYGRVYK
                     AQNLDVPAGRLDRLQIERKGSGKDYPTVVVSTTGAQYDATTGRWTMRAGEMHVIPDSQ
                     PSMVLSFSELHDRNMRERPVDLMAKPRDPQEMRYSELSRFIRALERSGGDANLLKVER
                     ALKLAIPITCLVIALFGAPLATSTQRGGTAYGIGLSLAITVTFLMLIQLTKPLGGKNI
                     IWPDVAAWLPNALFAIMGLVLLARVRT"
     gene            1621..>2336
                     /locus_tag="VFN38_17555"
     CDS             1621..>2336
                     /locus_tag="VFN38_17555"
                     /inference="COORDINATES: protein motif:HMM:NF014460.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HET9013636.1"
                     /translation="MSLPTRLDEPRGTETFPIVQRGGIRFFRRVTRGFIGLFSEIGAR
                     GYFLRDIGRALGDPATFVPETIRQMRGIGVDSIPLTVIVAAFIGGVIAIQVRYQLFPG
                     VQLSIIGLSVRLMQVLELGPLLTGLVLTGRVGARMTAEIGTMRVTEQIDALETLSYDP
                     VAFLIVPRLLASLIMLPALVVLADATGLFSGYLVSVYVTEVTKNDFVDGVRLGFGTFQ
                     VVYSLIKATLFGAAIAFICS"
BASE COUNT          335 a          805 c          805 g          391 t
ORIGIN      
        1 agcccgaccg cttcattccg gcgcgccggg cgccggccgc ggcgcccacg ggcgcggccg
       61 ccgtggcggc gcagatccag gcgtcgcccg acgccgacga ccaggtgcgc aaggcacgcc
      121 tcgccgaggc caagctgcgg ctcgagatcg cccagcgggc gcgcaaccgc tacgagatcg
      181 agatccacaa gaagttctcc ctcgccgcgg catgcctgat cttcgtgctg atcggcgcgc
      241 cgatcgccgt gcgcttcccg cgcggcggcg tggggctcgt gatcggcgtg agcctgctgg
      301 tgttcgcgct gtactacgtg gggctcatcg ggggcgagtc gctcgccaac gaaggaatca
      361 tcccgccctt ctgggcgatg tgggggacga acgtcatcct gacggtggtc ggcatcgggc
      421 tgctgctgcg catgggcaac gactccacgt cgaaccgcgg cggggactgg agcgacaagc
      481 tcgatgcgct gctggcgaag ttcgggcgcg gtccgcaggc ccggcttcgg agcgcgccat
      541 gagcctcgtc cgtccgctgg acaagtacgt gttcgtggag tggatgaaga tcttctgctc
      601 gacggcggtc ggcctgccga tcctgctcgt gatcatcgac ctcaccgacc acctgcagac
      661 gtacctcacg cgcaacatcc cgcgcgccga catcgcgctg agctacgtgt actggatgcc
      721 gcagtcgatg ttcatggcgc tgccggcggc ggtgctgttc gccacggtgt tctcgatcgg
      781 gaccttcacg cggcactcgg agatcacggc ggccaaggcg tccgggatca gcttctaccg
      841 cctggtggcg ccgatcctcg tgggggcggc gttcgcggcg gcggcggatc tcgtgatcgg
      901 ggagctggtg ccgatcaccg acgcgcggcg caacgacctg ctgcgcgaga gcaaggtgca
      961 gtcgggcacg cagcgctcca acttcgccta tgcggcggag tacgggcgcg tgtacaaggc
     1021 gcagaacctc gacgtccccg ccggccggct cgaccggctc cagatcgaac gaaaggggag
     1081 cggcaaggat tacccgaccg tcgtcgtctc caccaccggc gcgcagtacg atgcgacgac
     1141 gggccggtgg acgatgcgcg ccggggagat gcacgtcatc ccggacagcc agccgagcat
     1201 ggtgctgagc ttcagcgagc tgcacgaccg caacatgcgg gagcgccccg tggacctgat
     1261 ggccaagccg cgcgatccgc aggagatgcg ctacagcgag ctgtcgcgct tcatccgcgc
     1321 gctcgagcgg tcgggtggtg acgcgaacct cctcaaggtc gagcgggcgc tcaagctcgc
     1381 gattccgatc acgtgcctcg tgatcgcgct gttcggcgcg ccccttgcca cgagcacgca
     1441 gcgcggcggg acggcctacg gcatcgggct cagtctcgcg atcaccgtca ccttcctcat
     1501 gctcatccag ctcaccaagc cgctcggcgg gaagaacatc atctggccgg acgtcgcggc
     1561 gtggctgccc aacgcgctgt tcgcgatcat gggcctcgtg ctgctcgccc gcgtacgcac
     1621 gtgagcctgc cgacccggct ggacgagccc cgcggcaccg agaccttccc gatcgtccag
     1681 cggggcggca tcaggttctt ccggcgggtg acgcgtggct tcatcggcct gttcagcgag
     1741 atcggggcgc gcggctattt cctgcgcgac atcggccgcg cgctcggcga cccggccacc
     1801 ttcgtgccgg agacgatccg ccagatgcgc ggcatcggcg tcgattccat cccgttgacg
     1861 gtgatcgtcg ccgccttcat cggcggcgtc atcgccatcc aggtgcgcta ccagctcttc
     1921 cccggcgtcc agctctcgat catcggcctc tccgtgcgcc tgatgcaggt gctggagctc
     1981 ggcccgctgc tcacggggct cgtgctcacc gggcgggtgg gcgcgcggat gacggcggag
     2041 atcgggacga tgcgcgtgac ggagcagatc gacgcgctcg agacgctgtc gtacgatccc
     2101 gtggcgttcc tcatcgtgcc gcgcctgctc gcgtcgctca tcatgctgcc ggcgctcgtg
     2161 gtgctcgccg acgcgacggg gctgttcagc ggctacctcg tgtcggtcta cgtcaccgag
     2221 gtgacgaaga acgatttcgt cgacggcgta cggctcggct tcggaacctt ccaggtcgtg
     2281 tattcgctga tcaaggcgac gctgttcggc gcggcgatcg cgttcatctg ctccta
//
LOCUS       DASSYW010001111         2039 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_398981, whole genome shotgun sequence.
ACCESSION   DASSYW010001111 DASSYW010000000
VERSION     DASSYW010001111.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2039)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2039)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2039
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_398981"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..808)
                     /locus_tag="VFN38_17560"
     CDS             complement(<1..808)
                     /locus_tag="VFN38_17560"
                     /inference="COORDINATES: protein motif:HMM:NF021254.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exosortase/archaeosortase family protein"
                     /protein_id="HET9013637.1"
                     /translation="MVSAPPDPVTAPSTVHRAATAWIVDARRRLGERPVDWPASIATA
                     LAGALLFAQPFASLVRDWWTVPEAGHGLLLAPVAVWLAWRSGIRAGAAPQPAFGLAVL
                     IAAVLVRCAAGLAAELFTMRASMVMALAGLTIHRFGLRQLLHWWLPFTLAALSIPLPE
                     IVTQVLARPLQIRASRMGATLLELRNVPVLLTGNVIRLPGHELFVTEACSGLRSITAL
                     LSVGVLASAMLLRTPVARVVLVLLTIPIAIVVNGLRVFMTGFLVYYISPEL"
     gene            1130..>2039
                     /locus_tag="VFN38_17565"
     CDS             1130..>2039
                     /locus_tag="VFN38_17565"
                     /inference="COORDINATES: protein motif:HMM:NF014740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HET9013638.1"
                     /translation="MRRALTEHPRTWLVTGAAGFIGSNLVEELLALGQTVVGLDDFST
                     GKDANLTEALARTGGSSSAFRFIEGDIRHPAACRAACEGVDFVLHHAALASVPESIAN
                     PVANSQVNVEGFLNVLVAARDARVSRVVYASSSAVYGDTTHIPQVESVVGELLSPYAA
                     SKAANELYATTFLQAYGLASVGLRYFNVFGKRQDPNGAYAAVIPRWIANLLSEVPCEI
                     FGDGNTTRDFLYVADVVQANILAATADAGRARGVFNVACGQETSLNDLFQLIRRSLAR
                     LHPGVHAAAPRHAAARGGDIRRSVADI"
BASE COUNT          324 a          681 c          731 g          303 t
ORIGIN      
        1 ccagctccgg gctgatgtag tagacgagga agcccgtcat gaacacgcgc agcccgttga
       61 cgacgatcgc gatcgggatc gtcagcagta cgaggacgac gcgtgccacc ggcgtgcgca
      121 ggagcatcgc gctcgccagc acgccgacgc tgagcagcgc ggtgatggag cgtagcccgc
      181 tgcacgcctc ggtgacgaag agctcgtggc cggggagacg gatcacgttt cccgtgagca
      241 gcaccggcac gttgcgcagc tccagcaggg tcgcgcccat gcgcgaggcg cggatctgca
      301 gcgggcgcgc gagcacctgc gtcacgatct ccggaagcgg aatcgagagg gcggcgagcg
      361 tgaacggcag ccaccagtgc agcagctggc gcagaccgaa gcggtggatg gtgagcccgg
      421 cgagcgccat caccatcgag gcgcgcatgg tgaacagctc ggcggccagc cccgcggcgc
      481 agcggaccag cacggcggcg atgagtaccg cgaggccgaa cgccggctgc ggcgccgcgc
      541 cggcgcggat ccccgaccgc cacgccagcc acacggcgac cggtgccagc aggagtccgt
      601 gccccgcttc gggaacggtc caccagtcgc ggaccaggct cgcgaagggc tgcgcgaaca
      661 gcagggcccc cgccagcgcc gtcgcgatcg atgccggcca gtcgactggt cgctcgccga
      721 gcctccggcg cgcgtccacg atccatgcgg tcgcggcacg gtgaacggtg gaaggtgcgg
      781 tgaccggatc gggcggggcg gagaccatct cgcagcgtga cgggaaagga ggtttggggc
      841 gagcgtccac gtgcgatggc gacgcgcgcg ccgcacaatg tctctgggag cgcgtccgcg
      901 caacgttgcg ggggcgggcc cacacaagtg cgggacgcct gcgacactcg tggacgccgc
      961 gcgacggtca cgccttgccg attgcctgtt aaaccgtcgt gcaaattgag gttagacgtg
     1021 cgtttcggcc cgtcggtgcg gggaatggaa gatgcgtggc gctcctgaat gctcacctcc
     1081 gtacttcccg cgcatgtctg atcagccgac tggcagccga tatctgcatg tgcgtcgggc
     1141 tctcaccgaa caccctcgca cctggctcgt cacgggagcc gccggcttca tcggctccaa
     1201 tctcgtggag gagctgctgg cgctcgggca gacggtggtg gggctcgacg acttctcgac
     1261 cggcaaggat gcgaatctca ccgaggcgct ggcccgcacg ggcgggtcgt cgagcgcctt
     1321 tcgcttcatc gagggcgaca tcaggcaccc cgccgcatgt cgggccgcgt gcgagggggt
     1381 ggatttcgtc ctgcaccatg cggcgctcgc ctcggtcccg gagtcgatcg ccaacccggt
     1441 cgcgaacagc caggtcaacg tcgaagggtt tctgaacgtc ctcgtggcgg cgcgcgacgc
     1501 acgcgtgagc cgggtcgttt acgcatcgtc gagcgccgtc tacggggaca ccacccacat
     1561 tccgcaggtc gagtcggtcg tcggggagct gttgtcgccc tatgctgcct cgaaggcggc
     1621 gaacgagctc tatgcgacga cgtttctgca ggcgtacggg ctcgcctcgg tcgggcttcg
     1681 ctacttcaac gtcttcggca agcgacagga tccgaacggc gcgtatgccg cggtgatccc
     1741 gcggtggatc gcgaatctgc tgagtgaggt gccgtgcgag atcttcggtg acgggaacac
     1801 gacgcgcgac ttcctgtacg tggcggacgt cgtgcaggcg aacatcctcg cggcaacggc
     1861 cgacgccggc cgcgcgcgag gcgtcttcaa cgtggcgtgc ggacaggaga cgtcgctcaa
     1921 cgacctgttc cagctcattc ggcgttcgct cgctcgcctc catcccggcg ttcacgccgc
     1981 cgcgccgcgg catgccgcgg cgcggggcgg cgacattcgc cgctccgtgg cggacatct
//
LOCUS       DASSYW010001112         3307 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_972344, whole genome shotgun sequence.
ACCESSION   DASSYW010001112 DASSYW010000000
VERSION     DASSYW010001112.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3307)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3307)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3307
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_972344"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..676)
                     /locus_tag="VFN38_17570"
     CDS             complement(<1..676)
                     /locus_tag="VFN38_17570"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HET9013639.1"
                     /translation="MAVRTETRAPTRPAATAPSARPSRQAASLRAGGRAARAFFALLG
                     VSVATWSALVPSTKARLALSDGGLGLVLLAFGGGTIAATLVAGRLVARHGSRRVLVAS
                     GGALALCLPLLALAPSTPALSALLFLFGACVGLAGVAANAHAITLQTRVGRPLMSSLH
                     AMFSVGGLAGAGTCSLLLRTGMTAAASALVVAFALVALVLTQRARLVADIAAVPAVSP
                     GAVSGRR"
     gene            790..1698
                     /locus_tag="VFN38_17575"
     CDS             790..1698
                     /locus_tag="VFN38_17575"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HET9013640.1"
                     /translation="MELRHLRYFVAVAEELNFGRAARRLHIAQPPLSRQIRDLEREVG
                     TPLFERGARGVELTHAGRAFLPEVRLTLAQAERAQRTAQRAALGETGRLRVGFVEAAT
                     RSGILPDVLSFFRMHLPSIGLSLLEMDSMQQADALRDGRIDIGIVGTVPLDAERWLRV
                     ESVFSEPLVLAVPHGHALAGRRRFALADLAAESFVLFPRYAAPTLYDEIVARCRAAGF
                     SPRVTQEAAGWHTMVSLVSAGVGIAFVPQSLSGPPQPAVAFRTVRDLALEHEMSALWR
                     QGEKSPVRERFVTVLRAVARARPRMK"
     gene            complement(1652..2557)
                     /locus_tag="VFN38_17580"
     CDS             complement(1652..2557)
                     /locus_tag="VFN38_17580"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012515.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate kinase"
                     /protein_id="HET9013641.1"
                     /translation="MTSSEILCVGEVLWDALPEGLFLGGAPFNVACHLRGAGLPASMV
                     SRIGDDRLGEEVLRRATRYGVGVDLIQVDPALPTGFVRVAIDEAGNPAYEILAPAAWD
                     AIEPGDALLRRARTARAIVFGSLAQRDPRSRATIARLWESDALAVFDVNLRPPFDDRD
                     VVDRSLRRADVVKMSEQELARVAEWFDLAGTPRAMIAALAETFSCEVVCLTRGSEGAA
                     LWHDGRWTEHPGFRVEVRDTVGAGDAFLAVLLAGLFAGGSDASLLQHANLIGAYVATQ
                     YGAVPADQDAAISSGVAPAPPRAGR"
     gene            2783..>3307
                     /locus_tag="VFN38_17585"
     CDS             2783..>3307
                     /locus_tag="VFN38_17585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013642.1"
                     /translation="MLVATLIAPAAAFAQGRADARVEPVVVTTTAVRIRTAPSSIALS
                     TDEYGPGTQFRLAPSDYQLKDWYAIEYDGRVLYVPRYAAVMKGRAAMPAMMPAPAPVQ
                     NVVQAGAPVVMPAAAPAVMPAPPARTAQPAPEAPQPVIAEVIQMHEKVERPEILIGAT
                     YKIKSPLFEHALYVT"
BASE COUNT          483 a         1230 c         1152 g          442 t
ORIGIN      
        1 gacgacggcc gctgaccgcg ccaggcgaaa cggccggcac ggcggcgatg tccgccacga
       61 gccgcgcacg ctgcgtgagc accagggcga ccagggcgaa cgcgacgacc agcgcgctcg
      121 ccgccgcggt cattccggtc cgcaagagga ggctgcaggt gccggcgccg gcgagtccac
      181 ccacgctgaa catcgcgtga agggacgaca tgagcggccg tcctacacgc gtctggagcg
      241 tgatcgcatg cgcgttcgcc gccacgccgg ccaggccgac acaggcaccg aacaggaaca
      301 ggagcgccga cagcgcgggc gtggacggcg cgagcgcgag cagcgggagg cagagggcca
      361 gcgctccgcc cgatgcgacg agcacccgcc ggctgccgtg gcgcgcgacc aggcggccgg
      421 cgaccagtgt cgccgcgatc gtgccgccac cgaaggccag caggacgagg cccaggccgc
      481 catcgctcaa cgcgagtcgg gccttcgtgc tcggcacgag cgccgaccag gtggcgacgg
      541 acacgccgag cagcgcgaag aaggcacgcg ccgcgcgccc tcccgcccgc agcgaggccg
      601 cctgtcgaga cggccgtgcc gacggcgccg tcgccgccgg tcgcgtgggt gcccgagtct
      661 ccgtcctgac cgccatgcct tcctgcatca catccctctg tgtcgtggtg aatcgcactg
      721 catggaggga tagcggcccc ccgaatccag gtccaataca tctttcggcc gatgtgatac
      781 cttcagagta tggaactgcg ccacctgcgc tatttcgtcg ccgtcgccga ggagctcaac
      841 ttcggccggg ccgctcgtcg gctgcacatc gcacagccgc cgctcagccg gcagatccgg
      901 gatctcgagc gcgaggtcgg cacgccgctg ttcgagcgcg gcgcacgcgg cgtggagctc
      961 acgcacgccg gccgcgcctt cctccccgaa gtgcgactca cgctggcgca ggccgagcgc
     1021 gcccagcgca cggcgcagcg ggcggcgctc ggtgagacgg ggcgcctgcg cgtcggcttc
     1081 gtcgaggcgg ccacgcgctc aggcatcctg ccggatgtgc tcagcttctt ccgcatgcat
     1141 ttgccgagca tcggcctctc gctgctcgag atggactcca tgcagcaggc ggatgcgctg
     1201 cgcgacggtc gcatcgacat cggcatcgtc ggcacggtcc cgctcgatgc cgagcggtgg
     1261 ctgcgcgtcg aatccgtgtt ctccgagccg ctcgtgctcg ccgtgccgca cggccacgcg
     1321 ctggccggcc gccggcggtt cgcgctcgcg gacctcgcgg cggagtcgtt cgtcctcttc
     1381 ccgcgctatg ccgcgccgac tctctacgac gagatcgtcg cgcgctgccg cgccgccggc
     1441 ttcagtccgc gcgtcaccca ggaggcggcg ggctggcaca ccatggtgag cctcgtgagc
     1501 gccggcgtcg ggatcgcctt cgtgccgcag tcgctcagcg gcccgccgca gccggccgtg
     1561 gcctttcgca ccgtgcgcga cctcgcgctc gagcacgaga tgagtgcgct ctggcgccag
     1621 ggcgagaagt cgccggtgcg cgagcggttc gtcaccgtcc tgcgcgcggt ggcgcgggcg
     1681 cgaccccgga tgaaatagcg gcgtcctggt cggccggcac ggcgccgtac tgcgtcgcca
     1741 cgtaggcgcc gatgaggttc gcgtgctgga gcagcgatgc gtcggacccg ccggcgaaga
     1801 ggccggccag cagcacggcg aggaaggcgt cgccggcacc gaccgtgtcg cgcacctcga
     1861 cccgaaagcc cggatgctcg gtccaccggc cgtcgtgcca gagcgcggcg ccctcgctgc
     1921 cgcgcgtgag gcacaccact tcgcacgaga aagtctccgc gagcgccgcg atcatggcgc
     1981 gcggcgttcc cgcgagatcg aaccattccg ccacgcgcgc cagttcctgt tccgacatct
     2041 tcacgacatc cgcgcgacgc aacgaccgat cgacgacgtc gcggtcgtcg aacggcgggc
     2101 ggaggttcac gtcgaacacg gccagggcgt cggattccca cagacgggcg atcgtcgctc
     2161 gggagcgcgg gtcgcgctgc gcgagcgagc cgaagacgat ggcgcgagcc gtccgcgccc
     2221 ggcgcaggag cgcgtcgccg ggctcgatcg cgtcccatgc cgccggcgcg agaatctcgt
     2281 aggcggggtt cccggcctcg tcgatcgcca cccgcacgaa cccggtcggc agggccggat
     2341 ccacctggat gaggtcgacg ccaacgccgt accgcgtcgc gcggcgcagc acctcctcgc
     2401 cgagccggtc gtcgccgata cgactgacca tcgacgcggg cagcccggcg ccacgcaggt
     2461 gacaggcgac gttgaagggc gcgccgccga gaaagagtcc ctccgggagc gcatcccaga
     2521 gcacctcgcc tacgcacagg atctccgagc tcgtcatgtc gcctggttcg gggtggggca
     2581 tcgcgtcaga cgccctcgcc gaagctgggc ggcgctccct ttggcgcaag agagcggcgc
     2641 ccccctggcc ggtcccgggc tggcgggccg atccgttgcc tcccgcgggc tcctgccgtc
     2701 cctatagaaa ggatttcccg aacctcgacc ccgtcttcac atgtcgatgc ctgctgccgt
     2761 gccttcacgg attcgatgcg cagtgctggt cgccaccctg atcgccccgg ctgccgcctt
     2821 tgcgcaggga cgtgccgacg cccgggttga gccggtggtc gtgaccacga ccgcggttcg
     2881 catccgcacc gcgccgtcga gcatcgccct ctcgaccgac gaatacggtc cgggcacgca
     2941 gttccgcctc gcgccgagcg actatcagtt gaaggactgg tacgcgatcg aatacgacgg
     3001 ccgcgtgctg tacgtgccgc gctacgccgc cgtcatgaag gggagagccg ccatgcccgc
     3061 catgatgccg gcaccggccc ccgtgcagaa cgtggtgcag gccggcgcac cggtggtgat
     3121 gccggcggcc gcgcccgccg tgatgccggc tccgcccgcg cgcaccgcgc agccggcgcc
     3181 cgaggcgccg cagccggtca tcgccgaagt catccagatg cacgagaagg tggagcgccc
     3241 cgaaatcctg atcggcgcca cctacaagat caagtcgccg ctgttcgagc acgcgctgta
     3301 cgtcacc
//
LOCUS       DASSYW010001113         3529 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1066536, whole genome shotgun sequence.
ACCESSION   DASSYW010001113 DASSYW010000000
VERSION     DASSYW010001113.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3529)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3529)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3529
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1066536"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1528)
                     /locus_tag="VFN38_17590"
     CDS             complement(<1..1528)
                     /locus_tag="VFN38_17590"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HET9013643.1"
                     /translation="MLHHVVPRAAGARETILVVDDDLWLRQVATRALRAGGYDVLEAC
                     DGQTALTVSDGFGGTIDLVLSDAIMPGMTGAEVVEGLRRSRPQVRAVFMSGYLGEELS
                     SWGIDTSRVAFVKKPFSAVELLRSVRERLDSPESVVDGSGDAGDPLSRLIADPARLRV
                     LRDTGLLDAERDERFDRLTRLAAQFLMVPAAFITLVDEHRDFFTSDTGFGEPVAAARQ
                     FGGRTLCQHTLRSATPLAVDDTAADPHYASVPSVAAFGVGAYLGVPLIVEGQPIGAMC
                     AIDTTPRSWTGDEVRVLSDLAAMTLDEIELRMATRRNAESRAALGRANIQLHLAKNTA
                     EAANRAKSDFLTHMSHELRTPLNSIIGFANVLRRNTAGAMGPKELTYADRISSNGAHL
                     LEMVDRILDLSKVEQGDLNLRLTRVPLHDLARSVCDNFANEAVAATVSLVMDVEGLEQ
                     PDQAPAPLHTDESKLRQVLINLVGNALKFTPAGGSVRVAIACDPRSGAPLRLDVSDTG
                     I"
     gene            complement(1528..>3529)
                     /locus_tag="VFN38_17595"
     CDS             complement(1528..>3529)
                     /locus_tag="VFN38_17595"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HET9013644.1"
                     /translation="DQQRLQAAVIKVASGVSAATGTQFYEQLARNMAEALGARAGFVA
                     ELLPDDPGGARTIAAIVDGELTENFEYQLAGTPCASLLTTRTCVMAERVAEQFPHSPR
                     LAALGAQAYAGQRLDSSDGRPLGLIFVVFQDPPRHIDLITSTLQIFAARAAAEIERQR
                     TDAQVREQAALPDIAHEAILVKDMQGRIIFWNKGAERIYGWTAAEALGRDAVELLHDD
                     AADFRAAHAALLHRNDWEGELTRRAKDGRNLVVQVRWTLVRDAHGAPKAIFAINSDVT
                     EAKQLEAQFLRAQRTESIGTLASGIAHDLNHVLAPILMSVEMLKDMTVTEDDRDVLAM
                     LQGSAQRGAELVRQVLTFARGVEGQRIVVNPLHVMRDLLRVMRDTFPKSVSLRFTAAP
                     DLWSVTGDPTQLYQVFLNLCVNARDAMPDGGRLTIRMENAELEEGCGVLDPGAPRGAY
                     VKVRIEDTGVGIPPHLRDRIFEPFFTTKGVGAGTGLGLSTTLAIVKSHGGCVQLSSEV
                     GSGTTFTVYLAADAARAAAEEVEADETRLPRGNGELILVVDDEAAIRGIAQRALERFG
                     YRVVLADNGAEAAVLYGRRHAEIAAVLTDMAMPVMDGAATIRAIRAVNPAARIIASSG
                     LAQGVEVGAETGITHFISKPYTTERLLKSLRALLGGAPPVTH"
BASE COUNT          480 a         1263 c         1259 g          527 t
ORIGIN      
        1 cgatgccggt gtcggacacg tcgagccgga ggggcgcccc cgatcgcggg tcgcacgcga
       61 tcgcgacgcg caccgagcct cctgccgggg tgaacttgag cgcgttgccg acgaggttga
      121 tgagcacctg acggagcttg ctctcgtcgg tatgcagcgg cgcgggcgcc tggtccggct
      181 gctcgagccc ctccacgtcc atcacgagcg acacggtggc ggccaccgcc tcgttggcga
      241 agttgtcgca caccgagcgg gcgaggtcgt ggagcggcac ccgggtcagc cggagattga
      301 ggtcgccctg ctccaccttc gagaggtcga ggatccggtc caccatctcg agcaggtgcg
      361 cgccgttgga gctgatgcgg tcggcgtagg tgagctcctt cggtcccatc gcgccggcgg
      421 tgttgcggcg cagcacgttc gcgaagccga tgatggagtt gagcggggtc cgcagctcgt
      481 ggctcatgtg cgtgaggaag tccgacttcg cgcgattggc cgcctcggcg gtgttcttcg
      541 ccaggtgcag ctggatgttc gcgcgcccga gggcggcgcg ggactcggca ttccgccgcg
      601 tcgccatgcg gagctcgatc tcgtcgaggg tcatcgcagc gaggtcgctc agcacgcgca
      661 cctcgtcccc ggtccaggaa cggggcgtgg tatcgatcgc gcacatcgcc ccgatcggct
      721 gcccctccac gatcagcggc acgccgaggt aggcgcccac tccgaaagcc gccacggacg
      781 gcacgcttgc gtagtgcgga tcggcggcgg tgtcgtccac tgcgagcggc gtcgccgacc
      841 gcagcgtgtg ctggcagagc gtgcggccgc cgaactggcg cgccgccgcc accggctcgc
      901 cgaatccggt gtccgacgtg aagaagtcgc ggtgctcgtc cacgagggtg atgaacgccg
      961 ccggcaccat gaggaactgc gcggcgaggc gcgtgagccg gtcgaatcgc tcgtcgcgct
     1021 cggcgtcgag cagtccggtg tcgcgcagca cccgcaggcg cgccggatcg gcgatcaacc
     1081 ggctcagcgg atcgccggcg tccccgctcc cgtcgacgac ggactcgggc gagtcgaggc
     1141 gctcccgcac ggagcgcagg agctccaccg cactgaaagg cttcttcacg aaggccacgc
     1201 gcgaggtgtc gatgccccag ctcgacagct cctcgccgag gtagcccgac atgaacaccg
     1261 cccggacctg cgggcgcgag cggcgaagcc cctccacgac ctcggcgccg gtcatccccg
     1321 gcatgatggc gtcggagagc acgaggtcga tcgtcccgcc gaagccgtcg gacacggtga
     1381 gcgccgtctg gccgtcgcac gcctccagca cgtcgtagcc accggcgcgg agcgcacgcg
     1441 tggcgacctg gcgcagccag aggtcgtcgt ccaccacgag gatcgtctcg cgcgcccccg
     1501 ccgcgcgggg cacgacatgg tgcagcatca gtgcgtcacc ggaggcgcgc cgcccaatag
     1561 cgcgcggagg gacttgagca ggcgctcggt ggtgtagggc ttcgagatga agtgcgtgat
     1621 gccggtctcc gcgccgacct ccacgccctg ggcgagcccg ctcgacgcga tgatccttgc
     1681 cgccgggttc accgcccgga tcgcccggat cgtcgccgcc ccgtccatca ccggcatcgc
     1741 catgtccgtg aggacggcgg cgatctccgc gtgccgccgg ccgtacagca ctgcggcttc
     1801 cgcgccgttg tcggccagca ccacgcggta gccgaagcgc tcgagcgcgc gctgggcgat
     1861 gccgcggatg gcggcctcgt cgtccaccac gaggatcagc tcaccattgc cgcgcggcag
     1921 gcgggtctcg tcggcctcga cctcctccgc cgcggcgcgc gcggcgtcgg cggcgaggta
     1981 caccgtgaag gtggtgccgc tccccacctc gctggacagc tgcacgcagc cgccgtggct
     2041 cttcacgatg gccagggtgg tggagaggcc gagtcccgtg ccagcgccca cccccttggt
     2101 ggtgaagaag ggctcgaaga tccggtcgcg caggtgcggg gggatgccga cccccgtgtc
     2161 ctcgatgcgc accttcacgt acgcgccgcg cggcgcgccg ggatcgagca ccccgcagcc
     2221 ctcctcgagc tccgcgttct ccatgcggat ggtgagccgg ccaccgtcgg gcatcgcgtc
     2281 gcgtgcgttc acgcagaggt tcaggaacac ctggtacagc tgggtggggt cgccggtgac
     2341 gctccacagg tcgggcgcgg ccgtgaagcg caggctcacc gacttgggga aggtgtcccg
     2401 catcacccgg agcaggtcgc gcatcacgtg cagcgggttc accacgatgc gctgcccctc
     2461 gacgccccgc gcgaaggtga gcacctgccg cacgagctcc gcgccgcgct gcgcgctccc
     2521 ctggagcatc gccagcacgt cgcggtcgtc ctcggtcacc gtcatgtcct tgagcatctc
     2581 caccgacatg aggatcggcg ccagcacgtg gttgaggtcg tgcgcgatgc cgctcgccag
     2641 ggtgccgatg ctctcggtac gctgcgcgcg caggaactgc gcttcgagct gcttcgcctc
     2701 ggtgacgtcg gagttgatgg cgaagatggc cttcggcgca ccgtgcgcgt cgcgcacgag
     2761 cgtccaccgc acctgtacca cgaggttgcg gccgtccttc gcgcgccggg tcagctcgcc
     2821 ctcccagtcg ttccggtgga gcagcgcggc gtgcgcggcg cggaagtccg ccgcatcgtc
     2881 gtgcagcagc tccaccgcgt cgcggcccag cgcctcggcg gcggtccagc cgtagatgcg
     2941 ctcggccccc ttgttccaga agatgatgcg gccctgcatg tccttcacca ggatcgcctc
     3001 gtgggcgatg tccggcagcg ccgcctgctc gcgcacctgc gcgtccgtgc gctggcgctc
     3061 gatctccgcg gccgcgcggg cggcgaagat ctggagggtg gaggtgatga ggtcgatgtg
     3121 ccgcggtgga tcctggaaga cgacgaagat gagccccagc ggtcgtccgt cggagctgtc
     3181 gagccgctgg ccggcgtacg cctgcgcccc gagcgcggcc agcctcggcg aatgcggaaa
     3241 ctgttccgcc acccgctccg ccatcacgca ggtcctggtg gtgagcagcg acgcgcaggg
     3301 tgtgccggcg agctgatact cgaagttctc ggtgagctct ccgtccacga tggcggcgat
     3361 ggtgcgcgcg ccgcccggat cgtccggcag cagctcggcc acgaaccccg cccgggcgcc
     3421 gagcgcttcc gccatgttgc gcgcgagctg ctcgtagaac tgcgtgccgg tggcggcgga
     3481 gacgccgctc gccaccttga tcaccgccgc ctgcagccgc tgctggtcc
//
LOCUS       DASSYW010001114         2826 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_317397, whole genome shotgun sequence.
ACCESSION   DASSYW010001114 DASSYW010000000
VERSION     DASSYW010001114.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2826)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2826)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2826
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_317397"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..924)
                     /locus_tag="VFN38_17600"
     CDS             complement(<1..924)
                     /locus_tag="VFN38_17600"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metalloprotease"
                     /protein_id="HET9013645.1"
                     /translation="MSLHPSWLALVALVPAAATWWTGRRLLRRLDDPALPELLLQRRS
                     RIGALWGLTLFAILVLDARQAAWAIPLMLVAMLVADYPAQRVLLDERWSLRAYLWHSL
                     RRLAGGIAMWVVLVVAPSVVLGARDTRTATLLAAGFAATLLLWLHHYRRIWLWTHGAT
                     PLGARPGLDERFAAVMAKATTTPPLLYRFGQPGERRAAAFALPSAGHTGAVVFSDALL
                     ELLTADEVAAVFAHEVAHLEQHTPRRMRRLRIVSSLLIVAILALSLEGQRWAPGAHPF
                     LSLGCGVAVVVALSVRASRSKRHETESDLRGA"
     gene            1193..1957
                     /locus_tag="VFN38_17605"
     CDS             1193..1957
                     /locus_tag="VFN38_17605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013646.1"
                     /translation="MIAHEVHMHTLTLPGRLLAGALLIGALLPAVTLAQAATPAKQDS
                     VAKQDSATHGAAGKRSRLGALGRAAAAKAGSAANAVEQTTGVSKETMAKAALASTGVG
                     AAAMLAGGSDSGGLKSRVAGAVGGAALQRMTKEHGAPAGAGQMAAMQQQMLAQQMMAQ
                     QMMAAQANAAAAAGPGSGTSAIETEYTQLALRAQSGDRVALQQYMQFQYELSNAMMGL
                     QGLPPDRQQAAYQSAMRQAMTCAKSGQGCRTKVPKN"
     gene            2156..2719
                     /locus_tag="VFN38_17610"
     CDS             2156..2719
                     /locus_tag="VFN38_17610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013647.1"
                     /translation="MVDIMHRRHLPYAAPLLLFALACGRRDGAAGDSASTSDASSAET
                     KAVGEMMGGGSTLRVAVTGGPHAGQHEKKHDTPTCSVGYAGPKAWGNAASDTDDKEGL
                     VGMDLVVSDTAEAFRGTNDFTATVYFDDRLQEKNQLDIKPKAGKGSGTVKVERRGDKA
                     VVTLKGKTADGVGVDATVDCETVMGAS"
BASE COUNT          458 a         1001 c         1081 g          286 t
ORIGIN      
        1 cgcgcctcgc aggtcgctct cggtctcgtg cctcttgctc cgcgaggccc gcacggagag
       61 cgcgaccacc acggcgacgc cgcagcccaa cgacaggaaa gggtgcgcgc ccggggccca
      121 gcgctgcccc tcgagcgaga gggcgaggat ggcgacgatg aggagcgacg acacgatgcg
      181 caggcgtcgc atccgccgcg gcgtgtgctg ctcgaggtgc gcgacctcgt gggcgaacac
      241 cgccgccacc tcgtcggcgg tcagcagctc gagcagcgcg tcgctgaaca ccaccgcgcc
      301 ggtgtggccg gcgctcggca gggcgaaggc cgccgcgcgc cgctcgcccg gctgcccgaa
      361 gcggtagagc agcggcggcg tcgtcgtcgc cttcgccatc accgccgcga agcgttcgtc
      421 gagcccggga cgcgcgccaa gcggcgtggc gccgtgggtc cagagccaga tgcggcggta
      481 gtggtgcagc cagaggagca gcgtcgccgc gaagccggcg gcgagcagcg tcgcggtgcg
      541 cgtgtcgcgc gccccgagca ccacggacgg cgcgacgacg aggacgaccc acattgcgat
      601 cccgccggcg agccggcgca gcgagtgcca cagatacgcc cggaggctcc accgttcgtc
      661 gagcaggacg cgctgcgcgg gatagtcggc gacgagcatc gcgacgagca tgagcgggat
      721 cgcccacgcg gcctggcgcg cgtcgaggac gaggatggcg aagagggtca gcccccagag
      781 cgccccgatc cgcgagcgcc gctggagcag cagctcggga agcgcggggt cgtcgagacg
      841 gcgcaggagt cggcgaccgg tccaccacgt cgccgcggcg gggacgaggg cgacgagcgc
      901 gagccaggaa ggatggagag acatgcgcgg aagaagtggc atcagcgtcg gccggccgcc
      961 agcccgtgcc ggaatctccg gagaggacga cggggctccg ggggacgtga cagttccttc
     1021 acgaaccggt gaagccgcga ggcaacggaa gtgacgtacg cgccgcgcgc gcgccaggac
     1081 gttgcgcgcg aaccccgtac cacacatata ggtcgcgcca ggagtgatcg cccccgacgt
     1141 gcccgcgacg tagctcgtca ccgcggggcg ggatcctggc ccgcagccgg gcgtgatcgc
     1201 ccacgaggtc cacatgcaca ccctcacgct gcccgggcgc ctcctcgctg gcgccctcct
     1261 gatcggcgcg ctccttcccg ccgtcaccct cgcccaggcc gcgacgccgg cgaagcagga
     1321 cagcgtcgcg aagcaggaca gcgccaccca cggcgccgcc ggaaagcgct cgcgcctcgg
     1381 cgcgctgggc cgggccgcgg cggcgaaggc cggcagcgcg gccaacgcgg tcgagcagac
     1441 gacgggcgtc tcgaaggaga cgatggcgaa ggccgcgctg gcgagcaccg gcgtcggcgc
     1501 cgcggcgatg ctggcggggg gatccgactc gggcggcctg aagtcgcgcg tcgccggagc
     1561 ggtcggcggg gcggcgctgc agcggatgac gaaggagcac ggcgcgccgg ccggcgccgg
     1621 gcagatggcc gccatgcagc agcagatgct cgcccagcag atgatggcgc agcagatgat
     1681 ggccgcgcag gcgaacgccg ccgccgccgc cggcccgggg agcggcacga gcgcgatcga
     1741 gaccgagtac acgcagctcg cgctgcgcgc ccagtcgggg gacagggtcg ccctgcagca
     1801 gtacatgcag ttccagtacg agctgtcgaa cgcgatgatg gggctgcagg ggctcccccc
     1861 cgacaggcag caggccgcct accagagcgc gatgcgccag gcgatgacct gcgcgaagag
     1921 cggccagggg tgccggacga aggtgccgaa gaactgagcg cggccgccgc gcgctccggg
     1981 cgctccgatg ctccgctcac cggcgtggcc gcggccacgc cggtcttccg gtgcgcgcca
     2041 gggcgtgcga taatggcggg cgatgcggag acagcgcgct ccggcctgcg acgcatccca
     2101 tctccctgcc tcgagcgcgg tcgcgaccgc gccggggaaa ggtctcgatc cccacatggt
     2161 ggacatcatg caccgtcgcc acctgcccta cgccgcgccc cttctcctgt tcgccctcgc
     2221 ctgcggccgc cgcgacggcg ccgcgggcga cagcgcgtcc acgtccgacg cctcgagcgc
     2281 ggagacgaag gcggtcggcg agatgatggg tggcggcagc acgctgcgcg tcgcggtcac
     2341 cggcggcccg cacgccggcc agcacgagaa gaagcacgac acgcccacct gcagcgtcgg
     2401 ctacgccggc ccgaaggcgt gggggaacgc ggcgagcgac accgacgaca aggaggggct
     2461 cgtcgggatg gacctcgtcg tctccgacac cgcggaggcc ttccgcggca cgaacgactt
     2521 cacggccacc gtctacttcg acgatcgtct ccaggagaag aaccagctcg acatcaagcc
     2581 caaggccggg aagggctcgg ggacggtgaa ggtcgagcgc cgcggcgaca aggcggtggt
     2641 gacgctcaag gggaagaccg ccgacggcgt cggcgtggac gcgaccgtgg actgcgagac
     2701 cgtgatgggc gcgagctgag tggcgtgaga cggtagcggg acggcgggag cgaaagcggg
     2761 gagagggtag cggcgagacg ccgctaccct ctccccgctc tcgctcctgc gtcgaacgcc
     2821 gcgccc
//
LOCUS       DASSYW010001115         2522 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_67710, whole genome shotgun sequence.
ACCESSION   DASSYW010001115 DASSYW010000000
VERSION     DASSYW010001115.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2522)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2522)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2522
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_67710"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..719)
                     /locus_tag="VFN38_17615"
     CDS             complement(<1..719)
                     /locus_tag="VFN38_17615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013648.1"
                     /translation="MLSPATLARPYLNESVSARGGARVRIVERPGRWMAREPLDQLVA
                     DLQRIVRAATPAGSLDYGAASGDRARLDDAIITIVYDRAGLPVAFNALTLLDCELRGR
                     PVEVLHLGLVMVDPAHRAGGLPSVLYGLTAFLLFARRRLRPLWVSNVTQVPAVFGMVS
                     ESFDDVYPTPDADARQSYDHLHLARQIMARHRRVFGVGPDATYDERQAIIRNAYTGGS
                     DNLKKAFDDAPKHRNDVYNAA"
     gene            927..1643
                     /locus_tag="VFN38_17620"
     CDS             927..1643
                     /locus_tag="VFN38_17620"
                     /inference="COORDINATES: protein motif:HMM:NF018178.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1080 domain-containing protein"
                     /protein_id="HET9013649.1"
                     /translation="MSKSTARVALASIALLTGCFNTWQPSTAEHPTMKMSAEERQEGF
                     KPLFDGATLFGWRLYHGSGTGGWKAVDGMIQRATGGGDLVTTETFGNFDLRLEWNVAP
                     GGNSGIIYRVDDSGDATYMTGPEFQVLDDERHLDGKSELTSAGAVYGLYPAPRGIVKP
                     AGEWNSARILVNGNHVEHWLNDKLIAQYELGSADWAQRVATSKFDAWKGYGKFARGRI
                     ALQDHGDQVSFRNLRIKVLD"
     gene            1643..>2522
                     /locus_tag="VFN38_17625"
     CDS             1643..>2522
                     /locus_tag="VFN38_17625"
                     /inference="COORDINATES: protein motif:HMM:NF015764.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HET9013650.1"
                     /translation="MPIRARLSLMMFVQYFIYGAWLVTLGTFLGKALGASGTQVGLAY
                     SIPAISAILSPFIVGMIADRFFATEKVLATLHFTGGVLLYLATMQTSFNGFAWLFLAY
                     TLCYMPTLALTNSISFDNMQDPGREFPRIRVLGTIGFIVVGLIIGWLGADATALPLRI
                     GAGASIAMALYCLTLPHTPPHNAGKPFSARDVLGLDALALLKDRSFAVFVLGSFLLCI
                     PLQFYYAFTNPFLNEIGVSGAAGKMTFGQMSEIVFMLLMPWFIVRLGIKKMLLIGMAA
                     WTTRYLLFAYGNAGPGM"
BASE COUNT          387 a          842 c          870 g          423 t
ORIGIN      
        1 caggcggcgt tgtagacgtc gttgcgatgc ttcggcgcgt cgtcgaatgc cttcttgagg
       61 ttgtcggagc cgccggtgta ggcgttgcgg atgatggcct gccgttcatc gtacgtggca
      121 tcgggtccga cgccgaagac gcgtcggtgc cgcgccatga tctgtcgtgc gaggtgcaga
      181 tggtcgtagc tctgccgcgc gtcggcgtcg ggggtgggat agacgtcgtc gaagctctcg
      241 ctcaccatgc cgaacacagc gggcacctga gtgacgttgc tgacccagag ggggcgcagg
      301 cgtcgccgcg cgaagagcag aaatgccgtg agcccgtaca gcacgctcgg gagcccgccg
      361 gcgcggtgcg ccggatccac catgacgagg ccgagatgga gcacttcgac gggacgcccg
      421 cgcagctcgc agtcgaggag ggtgagcgcg ttgaaggcga cgggcaggcc ggcacgatcg
      481 tagacgatgg tgatgatcgc gtcgtcgagc cgggcgcggt cgccggaggc ggcgccatag
      541 tcgagcgagc cggccggggt ggccgcacgg acgatgcgct ggagatccgc aacgagctgg
      601 tcgagcggct cgcgcgccat ccaccggccg ggccgctcga cgatgcggac gcgcgcgccg
      661 ccgcgggcgg agaccgattc gttgaggtac ggacgcgcga gggtggcggg ggagagcatg
      721 gggctcaagg tctcatccgc ttccgcgatc cgcaatcgac gcacgtcgta cgccgtcgat
      781 cgcccgctac cgcactgccg gagacggggc gatcgatcat ccggagcgct gccgaccctt
      841 gtgccccgcc ccgccgagct ctctcttttg ccggcggcgc cccgcgccga acccatggtt
      901 ctgcgaccca tcccaccgag gtgcaaatgt cgaaatccac ggcgcgcgtt gcgctcgcgt
      961 ccattgcgct gctcacgggc tgcttcaaca cctggcagcc gtccacggcg gagcacccga
     1021 ccatgaagat gagcgccgag gagcggcagg aggggttcaa gcccctgttc gacggcgcga
     1081 cgctgttcgg ctggcgcctc taccatggca gcggcaccgg cggctggaag gcggtggacg
     1141 gcatgatcca gcgcgccacc ggcgggggcg atctcgtcac caccgagacc ttcgggaact
     1201 tcgatctccg cctcgagtgg aacgtcgcgc cgggcggcaa cagcggcatc atctatcgcg
     1261 tggacgactc gggcgacgcc acgtacatga cgggtcccga gttccaggtg ctcgacgacg
     1321 agcggcacct cgacggcaag tcggagctga cgtcggccgg ggcggtgtac gggctctacc
     1381 ccgcgccgcg cggcatcgtg aagccggccg gcgaatggaa ctcggcgagg atcctcgtga
     1441 acggcaatca cgtggagcac tggctcaacg acaagctgat cgcccagtac gagctgggca
     1501 gcgccgactg ggcgcagcgc gtcgccacca gcaagttcga cgcgtggaag ggctacggaa
     1561 agttcgcgcg cggccgcatc gcgctgcagg accacggtga ccaggtttcc ttccgcaacc
     1621 ttcgcatcaa ggtgctcgac taatgccgat ccgcgcgcgg ctctcgctca tgatgttcgt
     1681 gcagtacttc atctacggcg catggctcgt cacgctcggc acgttcctcg gcaaggcgct
     1741 cggcgcctcg ggcacgcagg tggggctcgc gtactcgatc cccgccatct cggcgatcct
     1801 gtcgccgttc atcgtcggga tgatcgccga ccgcttcttc gccaccgaga aggtgctggc
     1861 gacgctgcac ttcacgggcg gcgtgctgct gtatctggcg acgatgcaga cgagcttcaa
     1921 cggcttcgcc tggctgttcc tggcgtacac gctctgctac atgccgacgc tggcgctcac
     1981 gaactccatc tcgttcgaca acatgcagga tccggggcgg gagttcccgc gcatccgcgt
     2041 gctggggacg atcggcttca tcgtcgtggg actgatcatc ggctggctcg gcgccgacgc
     2101 caccgcgctg ccgctgcgca tcggggccgg ggcgtcgatc gcgatggcgc tctactgcct
     2161 gacccttccg cacaccccgc cgcacaacgc cggcaagccc ttctcggcgc gcgacgtgct
     2221 gggactcgac gcgctcgcgc tgctcaagga ccgctcgttc gcggtgttcg tgctcggctc
     2281 cttcctgctc tgcatcccgc tccagttcta ctacgccttc accaatccct tcctgaacga
     2341 gatcggggtg agcggcgcgg ccgggaagat gaccttcggg cagatgtccg agatcgtctt
     2401 catgctgctg atgccgtggt tcatcgtgcg cctcggcatc aagaagatgc tgctgatcgg
     2461 catggcggcg tggacgacgc gctatctcct cttcgcgtac ggtaacgccg gccccgggat
     2521 gt
//
LOCUS       DASSYW010001116         2032 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_30758, whole genome shotgun sequence.
ACCESSION   DASSYW010001116 DASSYW010000000
VERSION     DASSYW010001116.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2032)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2032)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2032
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_30758"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..274
                     /locus_tag="VFN38_17630"
     CDS             <1..274
                     /locus_tag="VFN38_17630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013651.1"
                     /translation="LPRHGRFTARFPTWTEDYAPAGLFGGQFMHSRPDPEILTRNFFH
                     ARVFGLARLCVLSVVSLSSQADRDGYQLAVPGGSFFPPTTTYPSMV"
     gene            426..1790
                     /locus_tag="VFN38_17635"
     CDS             426..1790
                     /locus_tag="VFN38_17635"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HET9013652.1"
                     /translation="MRIALISPKGPLYRHRGGIFKRALRYAPLTLTTLAALVPDDLEA
                     SINLLDEGIGDIDENLDADLIGMTVITGTAPRAYELAARFRRRGLPVVLGGPHVTLVP
                     DDAQPHADAIVTGYAEDTWPELLRDFARGAMRARYTQSAALSLAGRPFPRRDLMPGAR
                     FLTNNVFEATRACIHNCEFCVVPAAWGRKPYQKPVEEVVADIRQKRARKLIFVDLNLI
                     ADREYASRLFEALVPLRVEWYGLSTMLLADDRPLLSLAARSGCRGLLIGFESILSENL
                     RQSSKGFNRPSRFKDVVALMHAHGIAVYGCFVFGMDHDTPEVFLETARLAVEARIDLP
                     RFAISTPFPGTALLARLEREGRILTRNWELYDGQHVVFQPARMSVQELQEGTERAWRA
                     AYSAGSIARRLRASPAPPWIALTANLGYRHYARNLHRFYNCDWIIGRDARRGARPAVE
                     RAAS"
     gene            1787..>2032
                     /locus_tag="VFN38_17640"
     CDS             1787..>2032
                     /locus_tag="VFN38_17640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013653.1"
                     /translation="MRLTLIHPCIGRRREQRYLRSWEMEPLPPATIAGLTPRDVDVRF
                     YDDRMERIPYDEPTDLVALSVETYTARRAYQIASEYRR"
BASE COUNT          302 a          732 c          640 g          358 t
ORIGIN      
        1 tctaccacgt catggccgtt ttaccgccag atttccgacc tggaccgagg attacgctcc
       61 ggccgggctg ttcggcggcc agttcatgca ttcacggcct gaccccgaaa ttttgacccg
      121 caactttttt cacgcgcgcg tgttcggttt ggcgcggcta tgcgttctat cggttgtcag
      181 cctctcctcc caagccgacc gggacggtta ccaactcgcc gttcccggcg gctctttttt
      241 ccctcccaca actacttacc cgtcaatggt ttgacaaaaa ccctccccgg gcctcattct
      301 ttgtcagcaa tttttcagac gcctctcacg gcaccggcca ggcctcggcc ttactctcgt
      361 gcccgtcgga cgatggcgtc gcgccgcgct gacggtgcgt cgcgccagag aaagctggtg
      421 cactgatgag aatcgcgctc atctctccga agggaccgct ctaccgtcac cggggcggca
      481 tcttcaaacg cgccctgcgc tacgcgccgc tgacgctgac tacgctcgcg gccctcgttc
      541 ccgacgacct cgaggcgtcg atcaacctgc tcgacgaggg catcggcgac atcgacgaga
      601 acctcgacgc cgacctgatc gggatgaccg tcatcaccgg caccgcgccc agggcctacg
      661 agctcgcggc gcgcttccgg cgccggggcc tcccggtcgt cctcggtggc ccgcacgtga
      721 ccctcgtgcc ggacgatgcg cagccgcacg ccgacgccat cgtgaccggc tatgccgagg
      781 atacgtggcc cgagctgctg cgcgacttcg cccgcggcgc gatgcgggcg cgctacacgc
      841 agagcgccgc tctctcgctc gcaggccgtc cgttcccgcg ccgtgacctg atgcccggcg
      901 cccgcttcct gaccaacaat gtcttcgaag ccacgcgcgc gtgcatccac aactgcgagt
      961 tctgcgtcgt gcccgccgcg tggggccgga agccctatca gaagccggtc gaggaggtgg
     1021 tggccgacat ccgccagaag cgcgcccgca agctgatctt cgtcgacctc aacctgatcg
     1081 ccgaccgcga gtatgcctcg cgcttgttcg aagcgctggt gccgctccgc gtcgaatggt
     1141 acgggttgtc gacgatgctg ctcgccgacg accggccgct cctgtcgctg gctgcgcgca
     1201 gcgggtgccg cgggctgctc atcgggttcg aatcgattct ttccgagaac ctccgccagt
     1261 cgagcaaggg cttcaaccgt ccgtcgcgct tcaaggacgt cgtcgcgttg atgcacgcgc
     1321 atggcatcgc cgtctacggc tgcttcgtgt tcggcatgga ccacgatacg ccggaggtgt
     1381 tcctggagac ggcccggctc gccgtcgagg cgcgcatcga tctgccgcga ttcgcgatct
     1441 cgacgccgtt tccagggaca gcgctcttag cgcgcctgga gcgcgaaggc cggatcctca
     1501 cccgcaactg ggagctctac gacggccagc acgtcgtctt tcaaccggcg cggatgagcg
     1561 tgcaggagct gcaggagggg accgagcgcg cgtggcgcgc ggcgtattcg gcgggatcga
     1621 tcgcccggcg cctgcgcgcg tcgccggcgc cgccgtggat tgcgctgacc gcgaacctcg
     1681 gctaccgcca ttacgcgcgc aacctccacc ggttctacaa ctgcgactgg atcatcgggc
     1741 gcgacgcgcg gcgcggcgca cggccggcgg tcgagcgggc ggcgtcatga ggctcacgct
     1801 gatccatccg tgcatcggcc gccgccgcga gcagcgctac ctgcgatcgt gggagatgga
     1861 gccgctgccg ccggcgacga tcgccggcct gacgccgcgc gacgtcgacg tccgcttcta
     1921 cgacgatcgc atggagcgca tcccctacga cgagccgacg gacctcgtcg cgttgagcgt
     1981 cgagacctac acggcgcggc gtgcgtatca gattgcgagc gaataccgcc gc
//
LOCUS       DASSYW010001117         2987 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_546587, whole genome shotgun sequence.
ACCESSION   DASSYW010001117 DASSYW010000000
VERSION     DASSYW010001117.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2987)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2987)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2987
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_546587"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1704)
                     /locus_tag="VFN38_17645"
     CDS             complement(<1..1704)
                     /locus_tag="VFN38_17645"
                     /inference="COORDINATES: protein motif:HMM:NF039587.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5916 domain-containing protein"
                     /protein_id="HET9013654.1"
                     /translation="MSDRSARRLAGVPLLACALLAPSAAAQAPAAIVRTGTIRDSLRA
                     GKRMTAVRVSAPPRIDGKLDDAVWASAPVARDFTQKDPVEGARPTDQLEVRFVYDDVA
                     LYVATRVTLSKPRVIQAPLGRRENIGQAEHIWVSFDTYGDERTAYSFGVSASGVRGDW
                     YHPGDNETNIDTSFEPVWQAASDITAQGWTAEMRIPFSQLRFNDADVQRWGVNVDYWT
                     PSTNEDVFWIPVPKKETGWSSWMGQLAGISGIHPTRRLELLPYAASEATARATRDPAN
                     PFDDGRNVKPRVGGDLKMGIGPGLTLQATVNPDFGQVEADPAVVNLSAFETIFPERRP
                     FFVEGSQLLMGGGANYFYSRRIGARPRGAASGEFIDYPQATTILGAAKITGRLPSGTS
                     VGLLTALTGQEEARLFDGTTRAITERVVAPRTGYLVGRLQQQFGPNASTAGVSLTGVA
                     RQFGDATYLRDRYDARAWTGGGDFNYRFDRNTYNIQGFLGGSYVQGDTLAITALQRSS
                     ARYFQRPDRALGGEGWFRSGLLNSSYRPGATDLRGLATYLRVAKDGGAFNWEAQANVR
                     TP"
     gene            complement(1823..2068)
                     /locus_tag="VFN38_17650"
     CDS             complement(1823..2068)
                     /locus_tag="VFN38_17650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013655.1"
                     /translation="MQLQLVRATRETRHLDEIVNEFTPPMRRVCRHMADADLRQMIER
                     MAMNQLAEEQRRCATPRRAPRTGGRRPTRSFGTLHAC"
     gene            complement(2178..2873)
                     /locus_tag="VFN38_17655"
     CDS             complement(2178..2873)
                     /locus_tag="VFN38_17655"
                     /EC_number="1.5.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013756.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016646 - oxidoreductase activity, acting
                     on the CH-NH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HET9013656.1"
                     /translation="MHTTIDPTILYFGTPVALVSSLNPDGSANLAPMSSAWWLGKSCM
                     LGFGARSQTPINIQRTGECVLNLPSVHEVAAVDRLAKTTGSDPVPPHKVAMGYRHERD
                     KFDLAGMTEAASHIVAPPRAAECPVQLEAVLEAVHPLAVRDPDRRGALVALEVRIVRV
                     HVDESIRLDGHDDRIDPDRWRPLIMSFQQFYGLGPQVHRSTLATIPESAYRRGPAPRR
                     SEERTELRIPVAS"
BASE COUNT          442 a          970 c         1108 g          467 t
ORIGIN      
        1 cggcgtgcga acgttcgcct gggcttccca attgaaggca ccgccgtcct ttgccacgcg
       61 gaggtacgtc gccaggccac gcaggtcggt ggcgccaggc cgatacgacg agttcagcag
      121 gccactgcgg aaccagcctt cgccgccgag cgcgcggtcg gggcgctgga agtagcgcgc
      181 gctcgagcgc tggagcgccg tgatggccag cgtgtcgccc tgcacgtagc tgccgccgag
      241 gaagccttgg atgttgtacg tgttgcggtc gaagcgatag ttgaagtcgc cgccgcccgt
      301 ccatgcccgg gcgtcgtagc ggtcgcgcag gtacgtggcg tcgccgaact gccgcgctac
      361 cccggtgagc gagacgccgg cggtggacgc gttcggcccg aactgctgct gcagtcggcc
      421 gaccaggtag ccggtgcgcg gcgcgacgac gcgctcggtg atcgcgcgag tcgtaccgtc
      481 gaacaggcgc gcctcctcct ggccggtgag cgccgtgagc agccccaccg atgtgccgct
      541 cggcaggcgt cccgtgatct tggcggcgcc gaggatggtg gtggcctgcg ggtagtcgat
      601 gaactcgccg ctcgcggcgc cgcgagggcg cgcgccgatg cggcgtgagt agaagtagtt
      661 ggcgccgccg cccatcagca gctggctccc ctccacaaag aaggggcgcc gctcgggaaa
      721 gatcgtctcg aacgccgaga ggttgacgac cgcgggatcg gcctcgacct ggccgaagtc
      781 ggggttcacc gtggcctgaa gggtgagccc cgggccgatc cccatcttga gatcgccgcc
      841 cacgcgcggc ttcacgttgc ggccatcgtc gaacgggttg gcggggtcgc gcgtcgcgcg
      901 cgccgtggcc tcgctcgcgg catacggcag cagctcgagc cggcgcgtgg ggtggatgcc
      961 gctgatcccc gcgagctggc ccatccacga tgaccagccc gtctccttct tcgggacggg
     1021 aatccagaag acgtcctcgt tcgtcgacgg cgtccagtag tcgacgttca ccccccagcg
     1081 ctgcacgtcg gcgtcattga agcggagctg cgagaagggg atgcgcatct cggccgtcca
     1141 tccctgggcg gtgatgtcgg acgccgcctg ccacaccggc tcgaacgagg tgtcgatgtt
     1201 cgtctcgttg tcgccgggat ggtaccagtc gccgcgcacg cccgacgcgg acacaccgaa
     1261 cgagtacgcc gtgcgctcgt cgccgtaggt gtcgaacgag acccagatgt gctccgcctg
     1321 accgatgttc tctcggcgac cgagcggagc ctggatgacg cgcggcttgc tgagcgtgac
     1381 acgcgtcgcg acgtagaggg cgacgtcgtc gtagacgaag cggacctcga gctggtcggt
     1441 cgggcgggcg ccctcgaccg gatccttctg ggtgaagtcg cgcgcgacgg gcgccgaggc
     1501 ccacacggcg tcgtcgagct tcccgtcgat ccgaggcggt gcgctcacgc gcaccgccgt
     1561 catgcgcttg ccggcacgca ggctgtcgcg gatggtgccg gtgcgcacaa tggcggcggg
     1621 cgcctgggcc gcggcgctcg gtgcgagaag cgcgcacgcg agcagaggaa cgccggccag
     1681 gcgtcgagcg gatcgatcgg acatcggtgg gggagagtcg gtggggtcgg cgtgacgtga
     1741 tcgccgccgg aatcctaacg gaaggaatcc accgaaagtg acacgtgcgg cgcgccgacg
     1801 gttgggtggc gcgccgcgag ggtcagcagg cgtgcagggt gccgaagctt cgcgtcggtc
     1861 gcctaccgcc ggtgcgcggc gcgcggcgcg gcgtggcgca gcgtcgctgt tcctcggcga
     1921 gctgattcat cgccatccgc tcgatcatct ggcggaggtc ggcgtcggcc atgtgtcggc
     1981 agacgcgtcg catgggtggg gtgaactcgt tcacgatctc gtccaggtgc cgggtctcgc
     2041 gagtcgctcg cacgagctgg agctgcatgc acaacctctc tgcgccgagt ggagtgtggt
     2101 gcggtgctat cacctcggac gcgagaagga aacgtttggt caccacagtg gaggccgcca
     2161 gaccacccca gtccggatta gctcgccacg ggaatgcgga gctcggtccg ctcctccgaa
     2221 cgtcgtggcg cgggtccgcg gcggtacgcc gactcgggga tcgtggcgag cgtcgagcgg
     2281 tgtacctgtg ggccgagccc gtagaactgc tggaagctca tgatgagcgg gcgccagcgg
     2341 tccgggtcga tccgatcgtc gtggccgtcg aggcggatcg actcgtcgac gtgcacgcgc
     2401 acgatgcgca cttcgagcgc cacgagtgca ccgcgtcggt ccgggtcgcg cacggccagc
     2461 ggatgcacgg cttcgagcac cgcctcgagc tgcaccggac actcggccgc gcggggggga
     2521 gcgacgatgt gcgacgcggc ttccgtcatg ccggccagat cgaacttgtc gcgctcgtgc
     2581 cgatagccca tcgccacctt gtgcggcggc acgggatcgg agccggtcgt cttcgcgagc
     2641 cggtccaccg cggcgacttc gtgcaccgac gggaggttga gcacgcactc gccggtgcgc
     2701 tggatgttga tcggcgtctg cgagcgggcg ccgaagccga gcatgcagct cttcccgagc
     2761 caccaggcgg acgacatcgg cgcgaggttg gccgacccgt cgggattcag cgaggacacg
     2821 agcgcgacgg gcgtgccgaa gtagagaatc gtgggatcga tcgtggtgtg catcggtcgg
     2881 gacggatgag ggagtgcccg gggacgagat attgtccccg ggcgcaccga atcattcatc
     2941 cacagatttc gactcgctat ccgattcatg cgcgcgccag ggagctt
//
LOCUS       DASSYW010001118         2324 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_546592, whole genome shotgun sequence.
ACCESSION   DASSYW010001118 DASSYW010000000
VERSION     DASSYW010001118.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2324)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2324)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2324
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_546592"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(139..1128)
                     /locus_tag="VFN38_17660"
     CDS             complement(139..1128)
                     /locus_tag="VFN38_17660"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HET9013657.1"
                     /translation="MIPTPTMQETPAVSPPTGPEPVVQLDGVSVVYGKNRALKNVSAS
                     FARGAVGLLGPNGAGKSTMLKALLGFVKPTEGRMRVLGLDVAERPMEIRARLGYMPET
                     DGHIPGMNAVSFVAYCGQLAGLPAVDAMQRAHEVLYYVGLGEARYRAVETYSTGMKQR
                     IKLAQALVHDPDLLFLDEPTNGMDPKGRDEMLELIHDLGHNKNVNLILSSHLLPDVEF
                     TCDHVVVMDKGQVAAHGPIAELKGPAGRVFELRIKGDVQAFIDILQRAGMECHATDED
                     VMRVFVPAGAATASGSDQRAIFALAAQHRIQVRHLRPSVPTLEDVFAKAVGQE"
     gene            complement(1213..1749)
                     /locus_tag="VFN38_17665"
     CDS             complement(1213..1749)
                     /locus_tag="VFN38_17665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HET9013658.1"
                     /translation="MTEYTQSESLRKHMLAVEASVRGYARLWGENEDDWAVVALLHDF
                     DYERWPDQENHPFRGVEILTAKGYPEWVTRAILSHAEYSGVARESRLEHALYACDEMS
                     GFVTAAALVRPSRSILDLEASSVAKRMKDKAFARAVSRDDLRRGAEEIGLPLEQHIAN
                     VIAFMRVEADALGLRGTL"
     gene            complement(1763..2248)
                     /locus_tag="VFN38_17670"
     CDS             complement(1763..2248)
                     /locus_tag="VFN38_17670"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HET9013659.1"
                     /translation="MAFDRRYPSRPIVGVGAAVLVAGDDVLRAGWTGLAPALGVVLVR
                     RASEPLKGQWSLPGGAVETGETLETAIQREILEETGIEVGVGAVVDVFDRILADAGGR
                     TEYHFVLIDYVCRYRGGTLRAGSDADEVVIADPAQLAPYGLTAKAVEVIGKAMAHAFE
                     K"
BASE COUNT          357 a          842 c          753 g          372 t
ORIGIN      
        1 gccgaacagg atcccgatca tcggccggcg gcgcaggaac cccttgatgc cgctgcgcgc
       61 gatcaccagc caggcgcgct gcgccggctg gcgggcgccg ccgtagcggc ggtaactctg
      121 gtcgtgtatc ggcacgcgct actcctggcc cacggccttg gcgaagacgt cctcgagcgt
      181 cggcacgctc ggccgcaggt gccgcacctg gatgcggtgc tgcgccgcga gcgcaaaaat
      241 cgcgcgctga tcgctgccgc tcgccgtcgc cgcccctgcg ggcacgaaga cgcgcatcac
      301 gtcctcgtcg gtggcatggc attccatgcc agcacgctgc aggatgtcga tgaaagcctg
      361 cacgtcccct ttgatgcgca gctcgaagac gcgccccgcc ggtcctttca gctcggcgat
      421 cggcccgtgc gccgcgacct gccccttgtc catgacgacg acgtgatcgc acgtgaactc
      481 gacgtcgggc agcaggtgcg acgacaggat caggttgacg ttcttgttgt gcccgaggtc
      541 gtgaatcagc tcgagcatct cgtcgcgtcc cttggggtcc ataccgttgg tgggctcgtc
      601 caggaacagc agatccggat cgtgcaccag cgcctgcgcc agcttgatgc gctgcttcat
      661 gcccgtcgag taggtctcga cggcgcggta gcgggcctcg ccgaggccga cgtaatagag
      721 gacctcgtgc gcgcgctgca tcgcatcgac cgcaggcagc ccggcgagct gaccgcagta
      781 ggccacgaac gacacggcgt tcatgccggg gatgtggccg tcggtctccg gcatgtaccc
      841 gagccgtgcg cgaatctcca tcggccgttc ggcaacgtcc aggccgagca cgcgcatgcg
      901 cccctccgtc ggcttgacga agccgaggag cgccttgagc atcgtgctct tgccggcacc
      961 gttcggaccg agcagcccga ccgcgccgcg cgcgaagctg gcgctgacgt tcttcagtgc
     1021 gcggttcttg ccgtagacga ccgacacgcc gtcgagctgc accacgggct cagggcccgt
     1081 gggcggcgaa acggccggcg tctcctgcat cgtgggagtg ggaatcaagg ccgttagctt
     1141 atacggcttt ccgactgccg tggtttccgc gttcgcgccg gcggccgcag cgggcctgac
     1201 gctcgttgcg gctcacagcg tcccgcgcag cccgagggcg tccgcttcga cacgcatgaa
     1261 ggcgatgacg ttggcgatgt gctgctcgag cggcaggcca atctcctcgg ccccgcgccg
     1321 gagatcgtcg cggctcaccg cccgggcgaa cgccttgtcc ttcatgcgtt ttgccaccga
     1381 cgacgcctcg agatcgagga tgctcctgga cggccgcacc agagccgcgg ccgtgacgaa
     1441 cccggacatc tcgtcgcagg catagagcgc gtgctcgagc cgcgactcgc gcgccacacc
     1501 cgagtattcc gcatgcgaca ggatcgcgcg cgtcacccat tcgggatacc ccttcgccgt
     1561 caggatctcg acgccgcgga acggatggtt ctcctgatcc ggccagcgct cgtagtcgaa
     1621 gtcgtgcagc agcgcgacga cggcccagtc gtcctcgttc tccccccaca gccgcgcgta
     1681 gccgcggacc gaggcttcga ccgcgagcat atgcttgcgc aggctctcgc tctgcgtgta
     1741 ctccgtcatc agtgcgaacg cgtcacttct cgaaagcatg cgccatggcc tttccgatca
     1801 cctcgacggc cttcgccgtc aggccgtacg gcgccagctg cgccggatcc gcgatcacga
     1861 cctcgtcggc gtccgatccc gcgcggagcg tgccgccgcg ataccggcag acgtaatcta
     1921 tcagcacgaa gtggtattcg gtgcggccgc cggcatcggc gagaatccgg tcgaagacgt
     1981 cgaccaccgc gccgacgccc acctcgatcc cggtctcttc gagaatctcc cgctggatcg
     2041 cggtctcgag cgtctcgccg gtctcgacgg ccccgccggg caggctccac tgccctttca
     2101 acggctccga cgcgcggcga acgaggacga caccgagtgc gggcgccagg ccggtccacc
     2161 ccgcccgcag cacgtcatca cccgcgacga gcacggcggc gccgacgccg acgatgggac
     2221 gcgacggata ccgccgatcg aaggccatac tgcgtcgcgg tctaggcgcc gagcaccttc
     2281 acgaccaccc gcttgcgccg ctggccgtcg aactcggcgt agaa
//
LOCUS       DASSYW010001119         2538 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1817952, whole genome shotgun sequence.
ACCESSION   DASSYW010001119 DASSYW010000000
VERSION     DASSYW010001119.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2538)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2538)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2538
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1817952"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2538)
                     /locus_tag="VFN38_17675"
     CDS             complement(<1..>2538)
                     /locus_tag="VFN38_17675"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HET9013660.1"
                     /translation="IVAQGSALGARQVVFAITQPIEEAVSVVPGVTRVQSRSIRGASE
                     ISVTFAPSTDMALALQQTQARVNQVTSALPPGLDVEVERLSPSLFPIISYNLEGGKPA
                     TLYDIARYQIHPVLSRVPGVGRVDVQASDIREIEVIADPVRLAEQGLSYDDVANAIRA
                     STTVNAVGRVAQDYKQYLVVAAPLALTAEDIGGVVIGRGLHVRDVATVEVGTEDHVRI
                     VAGDGQPAALLNITRQVGGNTTAIADSVEKAAVTLRRTLPKGIVLKPVYDQASLVRDA
                     TTSVRDAMLIGAVLAVIILFIFLRKGRITAISAASIPLTLAITVFVMSIVGQTFNLMT
                     LGAMAIAIGIVIDDAVVISENIVRHLGFTPDRDRAIREAVQELIVPVTTSTITTVVVF
                     LPLRLLQGVVGQFFAALSITLTIAVLVSLVLAVTIIPLLAEAFLAGEPAVERAVAPGQ
                     LRVHGGLKARAAATLAAVGRAIDTLSERYTRSLDRVLHHTRLMIAAAVLMVAAGVLVY
                     ELVPTGFLPEIDEGAFVLDYFSPGGTALVETDRQVHVMESILLDKRLFPEVAGISRRT
                     GAELGLFATEQNRGDIVVRLTPEGARSRSSEEVIDDVRGRVASAVPRLRVEFVQILSD
                     VINDLAGAARPVEVRLFGADLDALETYARTLAPEMSKVDGVEDFFDGVAEPAPELTMT
                     INGGEANRAGLTPEQVSASVNGALLGVPAGEVRVQDRTIGVRVRAPDAVRNDALRLGA
                     LPVMIPQSRTTAPLSAMATFEPVEARSAYTRENQQQMITMTSDVTGSLGSVMGGVNAV
                     LAKHPPPAGIRLEIGGQAAGQADAFRSLLTVLALAVAAVIGVMVLQFR"
BASE COUNT          386 a          947 c          846 g          359 t
ORIGIN      
        1 cggaactgga gcaccatcac gccgatcacg gccgccaccg cgagcgcgag caccgtgagc
       61 agcgagcgga acgcgtcggc ctgccccgcc gcctgcccgc cgatctcgag acggatgccg
      121 gccggcggcg ggtgcttcgc caggacggcg ttcacgccgc ccatcacgct gccgagcgat
      181 ccggtcacgt ccgacgtcat ggtgatcatc tgctgctggt tctcgcgcgt gtaggcggac
      241 cgcgcctcca ccggttcgaa cgtcgccatg gccgacagcg gcgccgtggt tcggctctgc
      301 gggatcatca ccggcagggc gccgagccgc agcgcgtcgt tgcgcacggc gtctggagcg
      361 cgcacgcgca cgccgatcgt gcggtcctgc acgcgaacct cccccgccgg cactccgagc
      421 agcgccccgt tcaccgacgc cgagacctgc tccggcgtga ggccggcccg attggcctcg
      481 ccgccgttga tcgtcatcgt cagctcgggg gccggctcgg cgacgccgtc gaagaagtcc
      541 tccacgccat ccaccttgga catctccggg gcgagcgtcc tggcgtaggt ctcgagcgcg
      601 tcgagatccg cgccgaacag ccgcacctcc acgggtcggg ccgcgccggc gaggtcgttg
      661 atcacgtcgc tgaggatctg cacgaactcc acgcgcagtc gcggcacggc cgacgcgaca
      721 cgtccgcgca cgtcgtcgat cacctcctcg ctcgatcggc tgcgcgcacc ttcgggggtg
      781 agtcgcacca cgatgtcgcc gcgattctgt tcggtggcga acagccccag ctccgccccc
      841 gtgcgcctgg agatgccggc gacctcggga aagaggcgct tgtcgaggag gatgctctcc
      901 atgacgtgca cctggcggtc ggtctccacg agcgccgtgc cgccggggct gaagtagtcg
      961 agcacgaacg ccccttcgtc gatctccggc aggaacccgg tggggacgag ctcgtagacg
     1021 aggactccgg ccgccaccat gagcaccgcc gcggcgatca tcagacgcgt gtggtggagc
     1081 acgcggtcga gcgaccgcgt gtagcgctcc gacaacgtgt cgatcgcgcg acccaccgcg
     1141 gccagcgtcg ccgccgcgcg cgccttcaac ccgccgtgca cccggagctg cccgggcgcc
     1201 accgcccgtt ccaccgccgg ctcgcccgcc aggaacgcct cggcgagcag cgggatgatc
     1261 gtcaccgcga ggacgagcga tacgagcacc gcgatcgtca gcgtgatgga gagcgcggcg
     1321 aagaactgtc ccaccacccc ctggagcagc cgcagcggga ggaacacgac caccgtcgtg
     1381 atcgtcgacg tcgtgaccgg cacgatcagc tcctgcaccg cctcgcggat cgcccggtcg
     1441 cgatcggggg tgaagccgag gtggcgcacg atgttctcgc tgatcaccac cgcgtcgtcg
     1501 atcacgatgc cgatcgcgat cgccatcgcg ccgagcgtca tcaggttgaa cgtctgcccg
     1561 acgatcgaca tgacgaacac cgtgatggcc agcgtgaggg gaatcgacgc cgcgctgatc
     1621 gccgtgatgc gccccttccg caggaagatg aacaggatga tcaccgcgag cacggcgccg
     1681 atgagcatcg cgtcacgcac cgacgtcgtg gcgtcgcgca cgagggacgc ctggtcgtac
     1741 acgggcttca gcacgatccc cttcggcagc gtccgccgca gggtgaccgc ggccttctcc
     1801 acgctgtcgg cgatcgccgt ggtgttgccg ccgacctggc gcgtgatgtt cagcagcgcc
     1861 gccggctggc catccccggc gacgatccgc acgtgatcct ccgtgccgac ttcgaccgtc
     1921 gccacgtcgc gcacgtgcag accgcgcccg atcaccacgc cgccgatgtc ctcggcggtc
     1981 agcgccagcg gcgcggccac gacgaggtac tgcttgtagt cctgcgccac gcggcccacg
     2041 gcgttcacgg tcgtcgatgc cctgatcgcg ttcgccacgt cgtcgtacga cagcccctgc
     2101 tcggccagcc gcaccgggtc ggcgatgacc tcgatctcgc ggatgtccga cgcctgcacg
     2161 tccacgcgcc ccacccccgg cacgcgcgac agcaccggat ggatctggta gcgggcgatg
     2221 tcgtacagcg tcgccggctt gccgccttcg agattgtacg agatgatggg gaagagcgac
     2281 ggcgacaggc gctccacctc cacgtcgagc ccgggcggca gcgcggacgt tacctggttc
     2341 acccgcgcct gcgtctgctg cagcgcgagg gccatgtccg tggacggcgc gaaggtcacg
     2401 gagatctcgc tcgcgccgcg gatcgaccgc gactgcacgc gcgtgacccc aggcacgacg
     2461 ctcaccgcct cctcgatcgg ctgcgtgatg gcgaacacga cctgccgcgc gccgagcgcc
     2521 gaaccctgcg ccacgatg
//
LOCUS       DASSYW010001120         2043 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1828323, whole genome shotgun sequence.
ACCESSION   DASSYW010001120 DASSYW010000000
VERSION     DASSYW010001120.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2043)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2043)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2043
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1828323"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..388)
                     /locus_tag="VFN38_17680"
     CDS             complement(<1..388)
                     /locus_tag="VFN38_17680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013661.1"
                     /translation="MRAKISVATFADTVPSSSRTIAWTARSSSRSGSPGVRPANARTR
                     VRSCAWVAGWSAAKRAETTSSSAAASCQLTPSARRPNTCTPGPSRGGGEGQHERFGDD
                     LPDHAGAARPQCVADDHLRFPQRRPRE"
     gene            351..1955
                     /locus_tag="VFN38_17685"
     CDS             351..1955
                     /locus_tag="VFN38_17685"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HET9013662.1"
                     /translation="MSANVATLIFARTAMCESEMVVRHALGASRARVIAQIVTEGLVL
                     ALAAAVLGLVVAQTTVRYAWARAGQIIEDALPFWVDLKLEPVTIAYALLLALVAAALI
                     SLLPALRATGVSVQRGPQGITSTGGTMKFGGVWSFIIGAQVACTLLFVPAAVGIFTNT
                     LRDRSTRTAFPTERYLTFRLTVDNEALAGERGVPDDGQIAARRARAYDELAGRLREEP
                     GVTRVTLGDRLPTTSPEWVTVEMKQDGAPPARLLGNYEGGFAMAAVGAGYHEAFGARI
                     VAGRGLQTADAGAPNGPVVVNEAFMRVMGRNPVGARVRTLQRGSERELGPWHEIVGVV
                     TDLWTFPADWSEAAYIYPAASAAELDPVVVVVRVAGDARPLAPRVAALASEVDAGLHL
                     RDIVTLDDIVAQEQTRMVSGSVVFGSVLLVAVVFSAAGLYALMAVAVTRRTREIGIRI
                     ALGATPRRVLGSVFARAGRQLGGGIIAGNTLILLIAWRADSLTAALLVTSVITSVIMA
                     VVGVLACAAPARRALRIQPTEALRQV"
BASE COUNT          262 a          687 c          750 g          344 t
ORIGIN      
        1 cttcgcgcgg acggcgctgc gggaaccgga gatggtcgtc cgccacgcac tgggggcgag
       61 ccgcgcccgc gtgatcgggc agatcgtcac cgaagcgctc gtgctggccc tcgccgccgc
      121 cgcgcgaagg gccgggcgtg caggtgttcg gccgcctcgc cgacggagtg agctggcagg
      181 atgccgcggc ggagctcgac gtcgtctcgg cccgcttcgc cgccgaccag ccggccaccc
      241 acgcgcagct gcggacgcgg gttcgcgcat tcgccgggcg cacgccgggt gatccgctgc
      301 ggctggaaga tctggctgtc cacgcgatcg tcctgctgct gctggggacg gtgtcggcga
      361 acgttgcgac gctgatcttc gcgcgcacgg cgatgtgcga gtcggagatg gtcgtccgtc
      421 acgcgctggg ggcgagccgt gcccgcgtga tcgcgcagat cgtcaccgaa gggcttgtcc
      481 tggccctcgc cgctgccgtg ctcgggctcg tcgtggccca aacgacagtg cgctatgcct
      541 gggcccgggc gggtcagatc attgaggacg ccctgccgtt ctgggtggat ctgaagctcg
      601 agcctgtcac catagcgtat gcgctgctgc tcgcgctcgt cgctgcggcc ctgatcagcc
      661 tgctgccggc gctgagggcc acaggcgtgt cggtccagcg gggaccacag gggatcacga
      721 gcaccggcgg gacgatgaag ttcggcggcg tctggtcgtt catcatcggc gcgcaggtgg
      781 cgtgcacgct gctgttcgtg cctgccgcgg tggggatctt caccaacacc ctgcgcgacc
      841 ggtcgacgcg gacagccttt ccgacggagc gttacctcac ctttcgcctc acggtggaca
      901 acgaggcgct ggccggcgag cgcggggtgc ctgacgatgg gcagatcgcc gcgcgccgcg
      961 cccgtgcata cgacgagctc gcgggccggt tgcgtgagga gcctggtgtg acgcgcgtga
     1021 cgctcggcga ccgcctgccg acgacgtcgc cggagtgggt gacggtcgaa atgaagcagg
     1081 acggtgcacc gccggctcgc ctgctcggca attacgaggg cggattcgcg atggccgctg
     1141 tcggtgccgg ctatcacgag gcgttcggcg cgcggatcgt ggccggccgc ggcttgcaga
     1201 ccgcagacgc cggggcgccg aatggacccg tcgtggtcaa cgaggcgttc atgcgtgtga
     1261 tgggcaggaa tcccgtgggc gcacgcgttc gcacgctcca gcggggcagc gagcgcgagc
     1321 tgggaccctg gcacgagatc gtcggcgtgg tcaccgatct gtggacgttc ccagccgatt
     1381 ggagtgaggc ggcctacatc tatcccgcag cctccgcggc ggagctcgat cctgtcgtgg
     1441 tcgttgtgcg cgtcgcgggg gacgctcggc cgcttgcgcc ccgcgttgcc gcccttgcgt
     1501 cggaggtcga tgcgggcctg cacctccggg atatcgtcac cctcgacgac atcgtcgcac
     1561 aggagcaaac acggatggtg agcggcagcg tcgtcttcgg cagcgttctg ctcgtcgcgg
     1621 tggtcttctc cgcggccggt ctgtacgcgc tcatggccgt cgccgtgacg cgtcgcaccc
     1681 gcgagatcgg gatccgtatc gcactcggcg ccacaccccg gcgcgtgctc ggcagcgtgt
     1741 tcgcccgtgc gggtcgtcag ctcggcggcg gcatcatcgc tggcaacacc ctgatcctgc
     1801 tcatcgcgtg gcgcgccgac agcctgaccg cggcgctgct cgtaacgtcg gtgatcacgt
     1861 ccgtcatcat ggcggtcgtg ggcgtgctgg cgtgcgccgc accggcgcgc cgggcgctgc
     1921 gtattcagcc gaccgaggcg ctgcgccagg tctgaagggc gtctacatcg ctacttcagg
     1981 gcatccggac gatagagcgg atcgttgaac agtttcttga gtccggtgcc cctgcgccac
     2041 acc
//
LOCUS       DASSYW010001121         3021 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_196660, whole genome shotgun sequence.
ACCESSION   DASSYW010001121 DASSYW010000000
VERSION     DASSYW010001121.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3021)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3021)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3021
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_196660"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..341)
                     /locus_tag="VFN38_17690"
     CDS             complement(<1..341)
                     /locus_tag="VFN38_17690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013663.1"
                     /translation="MATASPQTFTPPSPGSWELEQTHMTKPPSILTGELMPAQMMRGF
                     SQGSRHYGLLLDYLDVAIINRFLYMAPRPVGAPKSAKGTPPRLLFALMRRLHPAIRQR
                     VNRATAVFRDRV"
     gene            1077..2708
                     /locus_tag="VFN38_17695"
     CDS             1077..2708
                     /locus_tag="VFN38_17695"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HET9013664.1"
                     /translation="MTPERIVAGLNAASHTEGKSLTDIQKQRVGEFMGGRPLGSVNNG
                     EAKAMANQCTANPPMRDPASGPGWNGWSPDMANTRFQPAAAARLAATDVPRLKLKWAF
                     GIPNGMTNNAQPTVVSGRVFMATDNGYIYSLDAKTGCVYWSFQNGSIVRNSPMVGAVK
                     GQGNAQWAVFFGDGHANVFGLDAQTGRQLWKVKVDDHVVARITGSVRYYNGVVYVPIS
                     GSEEFTAGHQDYPCCTARGGVAALDANTGKQIWKTYTADEPKPWKKNPNGVQLWGPAV
                     GGVWNAPTIDPVRGALYVGTGDAVTPPESRLSDAVMALDLKTGKVLWSRRATEDDLFM
                     GGCAGPNKGEQCPSTMGPDYDIGNSPILTTLPNGKRALFVGTKGADVLALDPDANGAV
                     LFRVNPSGQPVGFTGRGRGGIVWGGAADNRNVYYGMGAAGLGAVQNGDGKTAWTFSPA
                     RGALGAAPTTIPGVVFEGAGDGRLFAVSSADGKQLWEYNTAQPVETVNKVPARGGQIA
                     VSGAVVVDGMVYIGTGYAISAGASGGNALLAFSVE"
     gene            complement(2746..>3021)
                     /locus_tag="VFN38_17700"
     CDS             complement(2746..>3021)
                     /locus_tag="VFN38_17700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013665.1"
                     /translation="GLTADRVAPQLVKTPITFTASATGGTTPYQYRWWLYDGTSWRML
                     CDWTTGASFTWTPTMANANYVVHVWVKNANSPTTAADATASLRFAIQ"
BASE COUNT          524 a          994 c         1058 g          445 t
ORIGIN      
        1 acgcggtcgc gaaagaccgc ggtggcgcgg ttgacgcgct gacggatggc cgggtgcagg
       61 cggcgcatga gtgcgaagag cagccgcggt ggcgtccctt tcgcgctttt cggcgcgccg
      121 accggacgcg gcgccatgta cagaaaccgg ttgatgatcg ccacgtcgag gtaatccagc
      181 agcaggccgt aatgccgcga gccttgtgag aagccgcgca tcatctgggc cggcatgagt
      241 tcgccggtca ggatggacgg cggtttcgtc atgtgggtct gttcgagttc ccacgaccct
      301 ggcgacggag gcgtgaaggt ttgcggagag gctgtggcca tctaaacatg agtttacacg
      361 gccgttacgc ccccgctgcc gtggcgctac atcaggatca gcggcaaggc gagatatccc
      421 ggcaccgcga gaacggtccc gaccacgttg aatccgcgag cgagtcgcgg acggccgagc
      481 gctcgcgcga gcggtccaag aaagaacgcc acgcgacgat cacgatcgtc cacgccagcg
      541 cgttcgaccc gcgcgacggg tccaccagac gttccaggtg gcgcccagcg cgagcagttg
      601 gacggcgccc gccgtccctc cggagtggac cactcgccat gcagccaacg tgtcggggcg
      661 atctctgtgg tgttcctgca tgaaaccgag aagagcggcg ctcgccagca gcacgatgcc
      721 ggacgccaag agcaggcccg ttgtgtccat gggctcggaa cggtctcacg aattgggcgg
      781 acgagaatgt cagagttttg taagatccgc gtcggagcac acatttgcga tatctcacac
      841 acgccacggc cctcctgttt gcggccacgc tctttgctgg aacgacgttt cttggcgccg
      901 aatcgcccca ggcacccgcg gccgcgccgc cgcaaggggc tccgccggcg cctccggccg
      961 gacgtggcgg acagccaggc accgagagcg gctgggccac tttccagcag cagtgtttcc
     1021 gctgtcacgg caacaccgcg accaacgcca agacgacggc gtatcagatt cggcagatga
     1081 cgccagagcg gatcgtcgcg gggctcaatg ccgcgagcca cacggaaggc aagtcgctca
     1141 ccgacatcca gaagcagcgc gtcggcgagt tcatgggcgg ccgcccgctc ggcagcgtga
     1201 acaacggcga ggcgaaggcg atggccaacc agtgcacggc aaacccgccg atgcgcgacc
     1261 cggcgagcgg tcccggatgg aacggctgga gccctgacat ggccaacact cgcttccagc
     1321 ccgcggcggc cgcacggctg gcggcgacgg acgtaccgcg cctgaagttg aaatgggcgt
     1381 tcggcatccc gaacgggatg acgaacaacg cgcagccgac cgtcgtgtcc ggccgcgtgt
     1441 tcatggccac cgacaacggc tacatctact cgctcgacgc caagaccggc tgtgtctact
     1501 ggtcgttcca gaacggctcg atcgtccgca actcgccgat ggtcggcgcc gtgaaggggc
     1561 agggcaacgc gcagtgggcc gtcttcttcg gtgacgggca cgccaacgtc ttcggtctcg
     1621 acgcgcaaac cggccgccag ctgtggaagg tgaaggtcga cgaccacgtc gtggcccgca
     1681 tcacgggcag cgtgcgctac tacaacggcg ttgtgtacgt gccgatctcg ggctccgagg
     1741 agttcacggc cggccatcag gactacccct gctgcacggc gcgcggcggc gtggcggcgc
     1801 tcgacgcgaa caccggcaag cagatctgga agacctacac ggccgacgag cccaagccgt
     1861 ggaagaagaa cccgaacggc gtgcagttgt gggggccggc ggtgggcggc gtatggaatg
     1921 cgccgacgat cgatccagtg cgcggcgcgc tttacgtcgg caccggtgac gcggtcacgc
     1981 cgccggaatc acgcctgtcg gatgccgtga tggcgctcga cctgaagacc gggaaggtgc
     2041 tctggtcgcg ccgggccacc gaagacgacc tcttcatggg cggctgcgcc ggtccgaaca
     2101 agggcgagca gtgcccgagc acgatggggc cggactacga catcggcaac tcgccgattc
     2161 tcacgacgct cccgaacggc aagcgcgcgc tgttcgtcgg caccaagggc gcggacgtgc
     2221 tggcgctcga cccggacgcc aacggcgcgg tgctcttccg cgtgaacccg tccggccagc
     2281 cggtcggctt cacggggcgc ggccgcggcg gcatcgtgtg gggcggcgcc gccgataacc
     2341 gcaacgtcta ctacggcatg ggcgcggccg gccttggcgc cgtgcagaac ggcgacggca
     2401 agacggcgtg gacgttcagc cccgcgcgcg gcgcgctggg cgcggcgccc acgacgattc
     2461 cgggtgtcgt gttcgagggc gctggagacg gccggctctt cgccgtgtcg tcggccgacg
     2521 gcaagcagct gtgggaatac aacacggcac agccggtcga gaccgtcaac aaggttcccg
     2581 cgcgcggcgg tcaaatcgcc gtgtcgggcg ccgtcgtcgt ggacggcatg gtctacatcg
     2641 gcacgggcta cgcgatcagc gcgggtgcgt cgggcggcaa cgcgctgctc gcattcagcg
     2701 tggaatagcg ctgtgtcagg ggccgccagc cggcggcccc gatgttcatt ggatggcgaa
     2761 ccgcagcgac gcggtcgcgt ccgcggccgt cgtgggtgaa ttggcgttct tcacccacac
     2821 gtggaccacg tagttggcgt tcgccatcgt cggcgtccac gtgaacgagg cgcccgtcgt
     2881 ccagtcgcac aacatccgcc agctcgtacc gtcgtacagc caccaacggt actggtaggg
     2941 tgtggttccg cccgtcgccg aggccgtaaa ggtgatcgga gtcttcacca actgtggcgc
     3001 gacgcggtcg gcggtgagac c
//
LOCUS       DASSYW010001122         3140 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1265370, whole genome shotgun sequence.
ACCESSION   DASSYW010001122 DASSYW010000000
VERSION     DASSYW010001122.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3140)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3140)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3140
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1265370"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            194..439
                     /locus_tag="VFN38_17705"
     CDS             194..439
                     /locus_tag="VFN38_17705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013666.1"
                     /translation="MGAKSHRNMESDRPESGGADKDMIREKSGLLDRDKERFAREEHE
                     KNAAEASSQREESDRNQPDFPSEFSIDTPRNPDPNNK"
     gene            599..2518
                     /locus_tag="VFN38_17710"
     CDS             599..2518
                     /locus_tag="VFN38_17710"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HET9013667.1"
                     /translation="MTPLTPARALDEAPIRRPRLTIAVLAAAYAAAYLVWLRFGGAGD
                     RVRDVVSNAVFLPLNGSLALVFLLAARRRDAGDPMRRALSYLSAASLTVVLGSLVTLS
                     ALLRHGAVRIGSLADVCFLAGYPLTLAAYLSIPVGQSRISRWKLFCDAGMVLSGAGVA
                     LWYFVLRPIAGSTASSSAIALALLYTLSDLLVLVGIASIVLRRPLDDHRGAIAWLGVS
                     SALAVVADLAFNLVVINGGRRSMLATDALYLATYVSLMVSAELFLRSPSTAGSAREYR
                     GLARIASALPFVAAGATYALLCAIALRSWVAPLSGVALGAVGVSVFLGARQLLSFRQN
                     AARLAEAAVRASEARFRSLVQHSSDLIFVIGADGVIQFASSSASRVMGYEPEALVGVH
                     LDALAHPDDADVVASFVKVAASLPGVSPPAEWRLRGIDDAIVQVEAIGSNRLADEAVR
                     GIVVNARDVGERKALLDQLAHQAFHDPLTGLANRALFYDRVSHALQLAQREGRIVTVL
                     FLDLDGFKQINDTMGHAEGDHLLRMVAIRLGACARVTDTVARLGGDEFAVLVEDTAVA
                     RSTERLIDRIREQIAFPFTLAGHEVRISVSVGSASTAGGEVDEVLRHADVAMYAAKRA
                     ERGSHRAFEQGMLRS"
     gene            complement(2576..>3140)
                     /locus_tag="VFN38_17715"
     CDS             complement(2576..>3140)
                     /locus_tag="VFN38_17715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013668.1"
                     /translation="GTPSKPVLVSQYKYDLNDMYRQVELTGGPGFIRGTHTAWRHKNY
                     VFIADEVYRNGPVAGAKDAAASRMYGTLQVLDVKDVKRPKVVATYTPEYGGVHNVWVA
                     GDTLYLGAYDGGFHVFDISGELRGDLRAQGREIGHLNTADMDGNTKNAAFTWGVVVNP
                     ADGLAYVNDYNNGLWVVKVEPRPAPVP"
BASE COUNT          411 a         1165 c         1056 g          508 t
ORIGIN      
        1 agcggcgaga cgtggcagac gcatgggggg aatataggtc gggatccccg ctctacccat
       61 gaatccgccg cgaaggtccc tccgtaggga tccgggcccc ccttcgccgt cccgccgcac
      121 ctgcccgggc ggacggcgga ggggaacgaa agctgcctct gtctcccggc acacacagcc
      181 gaggagagtc gtcatgggtg caaagtcgca caggaacatg gagagcgatc gtccggaatc
      241 gggcggcgcc gacaaggaca tgatccgcga gaagtcgggg ctgctggacc gggacaagga
      301 gcggttcgcc cgtgaggagc atgagaagaa tgcagccgag gcgagctcgc agcgcgagga
      361 gtcggaccgg aaccagccgg acttcccgtc cgagttctcg atcgacacac cgcggaatcc
      421 cgacccgaac aacaagtagc gccatctctc cacccgcgcc gccgggctgt cacgccgagt
      481 cggtgacagt tcggcagtgc gggcgtgaac gtttgtatgt gggcgtcacg cgcttgcgtc
      541 gcacggcatt gaagcgtcac cttgtaccat ggcggcggtg cgtgcgcacg ccattcccat
      601 gacgccactc accccagcgc gcgccctcga cgaggcgccg atccgccgcc cgcggctcac
      661 catcgcggtg ctcgccgctg cctacgccgc cgcctacctg gtctggctgc gcttcggcgg
      721 cgccggcgat cgcgtgcgcg acgtggtgag caacgcggtg ttcctcccgc tcaacggctc
      781 cctcgcgctg gtgttcctcc tcgccgcgcg ccggcgcgac gccggcgacc cgatgcggcg
      841 cgcgctgagc tacctgtcgg ccgcgtcgct caccgtggtg ctgggcagcc tggtgacgct
      901 ctccgccctc ctgcgccacg gcgcggtgcg tatcggctcg ctcgccgacg tctgcttcct
      961 ggccggctat ccgctcacgc tggcggcgta cctgtccatc ccggtcgggc agagccgcat
     1021 cagccgctgg aagctgttct gcgacgcggg catggtgctg tccggcgccg gggtcgccct
     1081 gtggtacttc gtgctgcgcc ccatcgcggg gagcacggcc tcgtcgagcg ccatcgcgct
     1141 ggcgctgctc tacacgctgt ccgacctgct cgtgctggtg ggcatcgcgt ccatcgtgct
     1201 gcggcgtccg ctcgacgacc atcgcggcgc catcgcgtgg ctgggggtga gcagcgcgct
     1261 ggcggtggtc gccgacctcg ccttcaacct cgtggtgatc aacggcggcc ggcgctcgat
     1321 gctcgcgacc gacgcgctgt acctcgccac ctacgtgtcg ctgatggtga gcgcggagct
     1381 cttcctgcgc tcgccgtcca cggccggctc ggcgcgcgag taccgcggcc tcgcgcgcat
     1441 cgcgtcggcg cttcccttcg tcgccgccgg cgccacgtat gcgctcctct gcgccatcgc
     1501 gctccgctcg tgggtcgcgc cgctgagcgg cgtggcgctc ggcgccgtgg gcgtctccgt
     1561 gttcctcggc gcccgccagc tgctctcgtt ccgccagaac gccgcgcggc tcgccgaggc
     1621 ggccgtccgc gccagcgagg cccgcttccg ctcgctcgtc cagcactcgt cggacctcat
     1681 cttcgtcatc ggcgccgacg gggtgatcca gttcgccagc tcgtccgcct cgcgcgtcat
     1741 gggctacgag ccagaggccc tcgtcggcgt ccatctggac gccctcgccc acccggatga
     1801 tgccgacgtc gtcgcgtcct tcgtgaaggt cgcggcgagc ctgcccggcg tatcgccccc
     1861 ggcggaatgg cgcctccgtg gcatcgacga cgccatcgtg caggtcgagg ccatcgggag
     1921 caaccgcctc gccgatgaag cggtgcgcgg catcgtcgtc aacgcccggg acgtgggcga
     1981 gcgcaaggcc ctgctcgacc agctcgccca ccaggcgttc cacgatccgc tcaccggtct
     2041 ggcgaaccgc gccctgtttt acgaccgcgt ctcgcacgcc ctgcaactcg cccagcgcga
     2101 gggccgcatc gtgacggtcc tcttcctcga cctcgacggc ttcaagcaga tcaacgacac
     2161 gatgggccac gccgagggcg accacctgct gcgcatggtc gcgatccgcc tcggcgcgtg
     2221 cgcgcgcgtg acggacaccg tggcgcgcct cggcggcgac gagttcgccg tcctcgtgga
     2281 ggacaccgcc gtggcccgca gcacggagcg gctgatcgac cggatccggg agcagatcgc
     2341 ctttcccttc accctcgccg gccacgaggt gcgcatctcc gtcagcgtcg gcagcgcctc
     2401 gactgccggg ggcgaggtgg acgaggtgct ccgtcacgcg gacgtcgcga tgtacgcggc
     2461 caagcgcgcc gagcggggaa gccaccgggc gttcgagcag ggaatgctgc ggagctagtc
     2521 gaacggcgag gcgtcggatc acgcctcgcc gctcgactct cacgacggcc cgccgttacg
     2581 gcaccggcgc cggcctcggc tccaccttca cgacccacag cccgttgttg tagtcgttca
     2641 cgtaggcgag gccgtcggcg gggttcacga ccacgcccca ggtgaaggcg gcgttcttcg
     2701 tgttgccgtc catgtccgcg gtgttgaggt ggccgatctc gcggccctgt gcccgcaggt
     2761 cgccgcgcag ctcccccgag atgtcgaaca cgtggaagcc cccgtcgtag gcgcccaggt
     2821 agagcgtgtc gcccgccacc cacacgttgt gcacgccgcc gtactccggc gtgtacgtcg
     2881 ccaccacctt cgggcgcttc acgtccttca cgtcgagcac ctgcagcgtg ccgtacatgc
     2941 ggctggcggc ggcatccttc gctcccgcca ccggcccgtt ccggtacacc tcgtcggcga
     3001 tgaagacgta gttcttgtgg cgccacgccg tgtgcgtgcc gcggatgaat ccggggccgc
     3061 ccgtgagctc cacctgacgg tacatgtcgt tcaggtcgta cttgtactgc gacacgagca
     3121 ccggcttcga cggcgtcccg
//
LOCUS       DASSYW010001123         2637 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1449330, whole genome shotgun sequence.
ACCESSION   DASSYW010001123 DASSYW010000000
VERSION     DASSYW010001123.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2637)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2637)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2637
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1449330"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            68..637
                     /locus_tag="VFN38_17720"
     CDS             68..637
                     /locus_tag="VFN38_17720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013669.1"
                     /translation="MLRLALACLVLGLIVAVPAANAASTTQILRDCADDGVLQGDYTV
                     AELRKARQNIPTDTDQYTDCRDVLARAVARTGGGGSGGAGGTSGGGAGAGGGGGSGQP
                     LTAVDDADRQALDDALRGGSAPIDIGDGPVTPGAAGFAAGAARNELPTTLIVLLALLA
                     LAALAAAAPRGRDALRSTMHLVRAHGRSD"
     gene            789..>2637
                     /locus_tag="VFN38_17725"
     CDS             789..>2637
                     /locus_tag="VFN38_17725"
                     /inference="COORDINATES: protein motif:HMM:NF016800.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HET9013670.1"
                     /translation="MLIGVLLAAGAVCVAAVVRVPRTDAHRFYGATALLAIFLLVAYT
                     AASVVWSLAPADSWLEANRTLAYAAAFATGIALVRLAPRAYGGLLAGIAIACLAISLW
                     ALLTKVFPSALAGDETYARLRAPFQYWNSVGLMAALGVPPMLWLGARRPGGQAVNALA
                     WPVIALLLVCLMLSYSRGALLTLVFGCGFWLAVVPLRRTGVIILGAAILFAAPVVVWA
                     FAQDGLTTDRAPMAARVDAGHEFGALLLLMSTVLLIGGLAWEFARSQRGSTPGPPLRR
                     RVVAVATAVVVLGVGGAAAAAPGSLNERVSQEWQQLTDPNAATPANTPDRLTATSSVR
                     ARYWDEAFKVHGLSPWLGTGAGAYAIVRNRYRHDALAVRHAHGYVPQTLADLGWAGLA
                     VSLLALLAWLWAAARSAGLYPRARWLPFDAERVGIATLAAVVLAFGVHSALDWTWFVP
                     ANVLPVMLAAGWVAGSRPLGERLRDGVADDQAPEPPATQALWRRPAAFARRRPLVSAS
                     AVLIVLISLTAAWTAYQPVRALHAGEDAFVDVEVGAYERAVVRAREATKRNPLSVDAL
                     FDLATIEQARGQLGASEAALESAVRLEPANAETWRRLGRLRLDAIGKPDR"
BASE COUNT          301 a          965 c          957 g          414 t
ORIGIN      
        1 gcggagggca tgagccgggc gctgaacgcc gccggagcgt cgaatgcgcc ctgctagcgt
       61 gatttcgatg cttcgcctcg cactggcgtg cttggtgctg gggctcatcg tcgccgtacc
      121 ggcggcgaac gcggcgagca caacgcagat cctgcgcgac tgcgccgacg acggagttct
      181 gcagggcgac tacaccgtcg ccgaactgcg caaggcacgc cagaacatcc caacggatac
      241 ggatcagtac accgactgcc gcgacgtgct cgcacgggcc gtggcgcgca cgggcggagg
      301 cggtagcggc ggtgccggcg gcacgagcgg cggcggtgct ggcgccggcg gtggtggcgg
      361 cagcggccag ccgctcaccg ctgtcgacga cgccgaccgg caagcgctcg acgacgcgct
      421 ccgcggagga agtgcgccca tcgacatcgg cgacggccca gtgacgcccg gagctgcggg
      481 cttcgcggcg ggtgcggcgc gcaacgagct gccgacgacg ctgatcgtcc ttcttgcgct
      541 gctcgccctc gccgcgctcg ctgccgccgc gccccgcggt cgcgacgcgt tgcgctccac
      601 catgcacctg gtccgtgcgc atggccgcag cgactgagcc ccgcccggcg tctccgcgac
      661 gccggttcgt gacggtctcg gtcccggtcg ccggcgctgc ggcgctgatc gcggccggca
      721 cggcgatcgc gaccgtcctc gccgcgttcg tcgcgacggg cgggctgcgg gtcgagcaga
      781 ccaccgacgt gctgatcggc gtcctgctcg ccgccggcgc cgtctgcgtc gccgcggtgg
      841 ttcgcgtgcc gcgtacggat gcgcatcgtt tctacggcgc caccgccctg ctcgcgatct
      901 tccttctcgt ggcctacacc gccgcctctg tcgtgtggtc gctcgcgccc gccgattcgt
      961 ggctcgaggc caaccggacc ctggcctatg cggcagcgtt cgcgaccggg atcgcgctcg
     1021 tccgtctcgc gccgcgcgcg tacggcgggc tactcgcggg gatcgcgatc gcatgcctcg
     1081 cgatcagcct ctgggcattg ctcaccaagg tattcccttc tgcgctggcg ggcgacgaga
     1141 cctatgcgcg ccttcgcgcg ccgttccagt attggaacag cgtcggtctg atggcggcgc
     1201 tcggggtgcc gccgatgctg tggctgggag cgcgacgacc gggcgggcag gccgtcaacg
     1261 cgctggcgtg gcccgtcatc gcgctgctcc tcgtctgcct gatgctctcg tactcccgtg
     1321 gcgcgctcct gaccctggtg ttcggatgcg ggttctggct cgcggtcgtg ccgcttcggc
     1381 gcaccggcgt gatcattctc ggcgccgcca tcctgttcgc ggcgcccgtg gtcgtgtggg
     1441 cgttcgccca ggacgggttg accacggatc gcgccccgat ggcagcccgc gtggacgccg
     1501 gtcacgagtt cggtgcgctg ctcctgctga tgtcgacggt gttgctgatc ggcggcctcg
     1561 catgggagtt cgcgcgctcg caacggggat cgacgcccgg gccgccgctc cgccggcgag
     1621 tggtggccgt ggcgaccgcg gtggtcgtcc tcggggtggg cggcgccgcc gcggccgcgc
     1681 ccggcagcct gaacgagcgc gtgagccagg aatggcagca gctgaccgac ccgaacgccg
     1741 ccacgccggc taacacaccg gaccgactca ccgccacctc gtcggtgcgc gcacggtact
     1801 gggatgaggc cttcaaggtg cacgggctca gcccgtggct cggcacgggc gcgggcgcct
     1861 acgccatcgt ccgcaaccgt taccgccacg atgccctggc cgtccggcac gcccacggct
     1921 acgttcccca gacgctcgcc gacctagggt gggcagggct ggccgtctcg ctgctcgccc
     1981 tgttggcgtg gctgtgggcc gcggcccgct ccgccggctt gtatccacgc gcccggtggc
     2041 tgccattcga cgccgagcgg gtcgggatcg ccacgctcgc ggccgtcgtg ctcgccttcg
     2101 gagtgcactc ggcgctcgac tggacgtggt tcgtgccggc caatgtgctg cccgtgatgc
     2161 tcgccgccgg ctgggtggcc ggcagccgac ctctcggcga acgactgcgt gacggtgtgg
     2221 cggacgacca agcgcccgaa ccccctgcga cgcaggctct gtggcggcgg ccggccgcgt
     2281 tcgcgcgacg gcgcccgctc gtgagcgcat cggccgtgct gatcgtgctc atctccctca
     2341 cggcggcctg gaccgcctac caacctgtac gcgcgttgca cgcgggcgaa gacgccttcg
     2401 tggatgtgga ggtcggcgca tacgagcgcg ccgtcgtgcg ggcccgcgaa gcgacgaagc
     2461 ggaacccgct ctcggtcgac gcgctcttcg atctcgcgac gatcgagcag gcgcgcggtc
     2521 agctcggcgc ttcggaagcg gcgctcgagt ccgcggtgcg cctcgagcca gccaatgcgg
     2581 agacctggcg gcgtctcggc cgcctgcgtc tggacgcgat cggcaagccc gaccgcg
//
LOCUS       DASSYW010001124         2340 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_399211, whole genome shotgun sequence.
ACCESSION   DASSYW010001124 DASSYW010000000
VERSION     DASSYW010001124.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2340)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2340)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2340
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_399211"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(158..>2340)
                     /locus_tag="VFN38_17730"
     CDS             complement(158..>2340)
                     /locus_tag="VFN38_17730"
                     /inference="COORDINATES: protein motif:HMM:NF024247.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HET9013671.1"
                     /translation="LSGARGANALELATAVAALNQAGGAVGTTIRPAEGAPAFEGVAR
                     YSEVVDAVERMRAGQVPIAFVRGANPAYALPAAAGFAEAFAKVPFKVSFSLYPDETTE
                     LCDLVLPDLHSLESWGDADAGRGTVSLQQPAMDPVFAGPRATADVLILLAQKDPANAA
                     RYATKDYRGWLMARFPGGMNAFTTALQKGIGAGTVGARTAATAAPAQPRAPQPIEQTA
                     GDFYLVTYPSPVLGDGRGANKPWLQELPDPVTKVLWSSWVEIHPETASRLGIERGDIV
                     EVGTANGKVRAPAYLYLGIRTDTIGLALGQGHRSAATLDEFDGKHNDRVATQWGYGRY
                     ARNIGVRAHDLLGPGSDNAGGFALVSTKATLAKTGDHETLVSTEGSARQHGRGIAQAL
                     LVTQLGAAHEGAEGGGEHHGAIPGEPKTEFKPGLRSPVAADAQGVLGAPTAADSGKDK
                     GLYAPNHWSGMANRRWAMTIDLARCTGCSACVTACYAENNIPTVGASWQNASVYAEAK
                     PGFNITRGREMNWLRLERYFEGAEDGRFTEDFESRFVPMLCQHCGNAPCEPVCPVYAT
                     YHAPDGLNVQVYNRCVGTRYCSNNCPYKVRYFNWFGYGEEDRKQYAFPEPLNWQLNPD
                     VTVRTKGVMEKCTFCVQRIREAETRAKSEGRELVADEFTTACSQACPSRAIVFGDAAD
                     PSWTVATQLADQRAYHVFEALNTFTAVVYLKKVNHPGPALPAGA"
BASE COUNT          297 a          837 c          849 g          357 t
ORIGIN      
        1 gccgagcgtc gggcggagcg tgccgatgat gtcgcgatcg acctgttcgt aatcccgaac
       61 gccgggcagt cggttgcccg acgtcgggac gttcggacgc tgcgcgagct cgtcgtcgcg
      121 gcgcggctgg accacggtgg ccatcgtcgc gcctgcctta cgccccggcc ggcagcgccg
      181 gccccggatg gttgaccttc ttcaagtaga ccacggcggt gaaggtgttg agcgcctcga
      241 acacgtggta cgcacgctgg tccgcgagct gggtcgcgac ggtccacgac gggtcggcgg
      301 cgtcaccgaa cacgatggcc cgcgaagggc acgcctgcga gcacgcggtc gtgaactcgt
      361 cggccaccag ctcgcgtccc tccgacttcg cccgcgtctc cgcctcgcgg atgcgctgca
      421 cgcagaaggt gcacttctcc atcacgccct tcgtgcggac ggtgacgtcg gggttgagct
      481 gccagttcag cggctccggg aaggcgtact gcttgcgatc ctcctcgccg tagccgaacc
      541 agttgaagta acggaccttg tacgggcagt tgttgctgca gtagcgcgtg cccacgcagc
      601 ggttgtagac ctgcacgttg agcccgtcgg gcgcgtggta ggtggcgtac accgggcaca
      661 ccggctcgca cggggcgttg ccgcagtgct ggcagagcat cgggacgaag cgggactcga
      721 agtcctcggt gaaccgtccg tcctcggcgc cctcgaaata gcgctccagc cgcagccagt
      781 tcatctcgcg gccgcgcgtg atgttgaagc cgggcttcgc ctcggcgtag acgctggcgt
      841 tctgccacga cgcgcccacc gtgggaatgt tgttctcggc gtagcacgcc gtgacgcagg
      901 cggagcagcc ggtgcagcgg gcgaggtcga tcgtcatcgc ccaccggcgg ttcgccatgc
      961 ccgaccagtg gttcggcgcg taaagcccct tgtccttgcc gctgtcggcg gcggtcggcg
     1021 cgccgagcac gccctgcgcg tcggcggcca cgggggaccg caggccgggc ttgaactcgg
     1081 tcttcggctc gccggggatc gcgccgtggt gttccccgcc gccctccgcc ccttcgtgcg
     1141 ccgcgccgag ctgggtgacg agcagcgcct gcgcgatgcc gcgcccgtgc tgccgcgccg
     1201 aaccctcggt ggagacgagg gtctcgtggt cgccggtctt cgccagcgtc gccttggtgc
     1261 tcacgagggc gaagccgccc gcgttgtcgc tgcccgggcc gagcaggtcg tgcgcgcgca
     1321 cgccgatgtt gcgggcgtag cggccgtagc cccactgggt ggccacccgg tcgttgtgct
     1381 tgccgtcgaa ctcgtcgagc gtcgcggcgg agcgatgccc ctgccccagc gcgagcccga
     1441 tggtgtcggt gcggatgccg aggtacaggt acgccggcgc gcgcaccttg ccgttggcgg
     1501 tgcccacctc gacgatgtcg ccgcgctcga tcccgagccg gctcgccgtc tcgggatgga
     1561 tctccaccca cgagctccac agcaccttcg tcaccgggtc gggcagctcc tggagccacg
     1621 gcttgttcgc gccgcgcccg tcgccgagca ccggcgacgg ataggtgacg aggtagaagt
     1681 cgcccgccgt ctgctcgatg ggctgcgggg cgcgcggctg cgcgggagcg gcggtggccg
     1741 ccgtccgggc gccgaccgtc cccgcgccga tccccttctg cagcgcggtc gtgaaggcgt
     1801 tcatcccgcc cgggaagcgc gccatcagcc agccgcggta gtccttcgtc gcgtagcggg
     1861 cggcgttcgc cgggtccttc tgcgccagca ggatgagcac gtcggcggtc gcgcgcggcc
     1921 ccgcgaacac cggatccatc gccggctgct ggagcgagac ggtgccccgg ccggcgtcgg
     1981 cgtcgcccca cgactcgagc gagtgcaggt cggggaggac gaggtcgcac agctcggtcg
     2041 tctcgtccgg atagagcgag aagctgacct tgaacggcac cttcgcgaac gcctcggcga
     2101 acccggccgc ggcgggaagg gcgtacgccg gattggcgcc gcgcacgaag gcgatgggca
     2161 cctgccccgc acgcatccgc tcgacggcgt cgacgacctc gctgtagcgg gccacgccct
     2221 cgaacgccgg cgcgccctcg gcgggacgga tggtcgtgcc caccgcgccg ccggcctgat
     2281 tcagcgccgc caccgcagtc gccagctcga gggcgttggc gccgcgcgcg ccggagagca
//
LOCUS       DASSYW010001125         3138 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1644263, whole genome shotgun sequence.
ACCESSION   DASSYW010001125 DASSYW010000000
VERSION     DASSYW010001125.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3138)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3138)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3138
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1644263"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..999
                     /locus_tag="VFN38_17735"
     CDS             <1..999
                     /locus_tag="VFN38_17735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013672.1"
                     /translation="PAFLRSGGINSLLQQLSSLETERTRLLERRLETDPEIVALSRSI
                     TDVEGQLIPLARSDQTSLAKQRAQINTQLAAMDAKLESFPGAAEEGSRLLRDVKRLGT
                     TQTALQTELVQARLNTVTEGGDVRGLDVAIVPKKVVFPEPWLTSGVGLAAGLIVGIVL
                     ALVGGSHGRYLEDQYAIERALGVPALRFDARTPLLMSGRSSVRTLLLIPVEPHVETAR
                     VAERLAETALARGESATILDLTAPNPVTQLGNSVGGMIARLEQEHGLVIARLPGLSAE
                     STAAVLSESRPVLLVAPSRRINRRELVGALDTLRRLEVPCAGVVLSDGEPHGALAR"
     gene            980..2398
                     /locus_tag="VFN38_17740"
     CDS             980..2398
                     /locus_tag="VFN38_17740"
                     /inference="COORDINATES: protein motif:HMM:NF016800.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HET9013673.1"
                     /translation="MAPSRGEAVARVAEPRWRLVSPETAAGDRWRFRPLAVVRVALLL
                     MLVGQLGRIPVLPTGTGEAPLLVNDIFVMSMIAAGVMSGLVARSFRIDRVAGIALVFA
                     ALGGISAVLSVPKYGLSGYELLVSTAYLARWVVYLGIYLVVINVVRSDDVMTLWHTLE
                     AMMLAFAAFGIIQAIFIPHFAQVVYPESRVWVDWDEQGNRLVSTVLEPNIAGGMIVLT
                     LIVQLAQLAGGERVALWKPFVMFSAQVATLSRSSFVALFVGGLIILSVRGVSRRMLRF
                     GAMVAVAVAVASPKLIQYAQSYTKLEVDASAMTRVTNWLRALRVFADNPIIGVGFNTF
                     GYVGESYGWPRKGLATNSTDGGLLFIAVMTGIVGLSLYLTMLAAVVRRCRRVWRDRAT
                     SQAFRSLAVGIGAATIAICVQSFFVNSLLTVFVMEPLWILWGLASVLAWQITPAPVVR
                     PFARVVAIAGAPSDRRSLSLHP"
     gene            2406..>3138
                     /locus_tag="VFN38_17745"
     CDS             2406..>3138
                     /locus_tag="VFN38_17745"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HET9013674.1"
                     /translation="MSHAPLPVPAVEPARSRCVVCGSTQGEAVFNEFGVDVRQCAECG
                     HVYSSWPGGEDYDGYFSAAPIDPQAAQRFWDEQHARMYDDFIGRYLAGRQGRLLDVGC
                     GLGYFVKRAATVPGWEAHGYEISRQAVTYARETLGLTNVHCGKVEDSHFAPGSFDVIT
                     LWDVIEHIPNPDPLLAHLCSLLAPGGMLCMHTPNAVIQLPKARLKRRLRGMQPGLHYL
                     EARDHINLYKVSTLRRVLERNGFHDV"
BASE COUNT          423 a         1052 c         1129 g          534 t
ORIGIN      
        1 cccgccttcc tgcggagcgg cgggatcaac agcctgctgc agcagctgtc gtcgctcgag
       61 accgagcgga cgcgcctgct cgagcgtcgc ctggagacgg atcccgagat cgtcgcgctg
      121 tccaggagca tcacggacgt cgagggacag ctcatcccgc tggccaggtc ggaccagacg
      181 tcgttggcga agcagcgcgc gcagatcaac acgcagctcg cggcgatgga cgcgaagctg
      241 gagtcctttc ccggcgccgc ggaggagggg agccggctgc tgcgcgacgt gaagcgactc
      301 ggcaccacgc agacggcgct gcagaccgag ctcgtacagg cgcgcctgaa cacggtgacc
      361 gaaggtgggg acgtgcgcgg cctcgacgtc gccatcgtgc cgaagaaggt cgtgttcccc
      421 gagccgtggc tgacgagcgg agtcggcttg gccgcggggc tgatcgtggg catcgtgctc
      481 gcgctcgtcg gcgggtcgca cggccgctac ctcgaggacc agtacgccat cgagcgcgcc
      541 ctcggcgtgc cggcgctgcg cttcgatgcg cgcacgccgc tgctcatgtc ggggcgctcg
      601 agcgtccgga cgctcctgct catcccggtc gagccgcacg tggaaacggc gcgggtcgcg
      661 gaacgcctgg ccgagacggc gctcgcgcgc ggcgagagcg cgaccattct cgatctcacg
      721 gcgcccaacc cggtgacgca gttgggcaac agcgtgggcg ggatgatcgc gcgcctcgaa
      781 caggagcacg ggctcgtgat cgcgcggctt cctggcctga gcgcggagtc caccgccgcc
      841 gtgctgagcg aatcgcgtcc ggtgctcctc gtcgcgccgt cgcggcggat caaccgccgc
      901 gaactggtgg gggcgctcga caccctgcgg cggctcgaag tgccgtgtgc cggggtggtg
      961 ctgagcgacg gggagccgca tggcgccctc gcgcggtgag gcggtcgccc gcgtagcgga
     1021 gccccgctgg cggctggtct cgccggagac cgcggccggc gaccgctggc ggttccggcc
     1081 gctcgcggtg gtgcgggtcg ctctcctgct catgctggtg ggtcagctcg ggcgtattcc
     1141 cgtgcttccc acgggcacgg gcgaggcgcc cctgctggtg aacgacatct tcgtgatgag
     1201 catgatcgcg gccggcgtga tgagcgggct cgtcgcgcgg tcgttccgga tcgatcgggt
     1261 ggccggcatc gcgctggtat tcgccgcgct cggcgggatc tcggccgtgc tctcggtgcc
     1321 gaaatacggg ttgagcggct acgagctgct cgtgagcacg gcgtacctcg cgcggtgggt
     1381 cgtctatctc ggcatctatc tcgtcgtcat caacgtcgtt cgctccgacg acgtgatgac
     1441 gctgtggcac acgctcgagg cgatgatgct cgccttcgcg gcgttcggga tcatccaggc
     1501 gatcttcatc ccccatttcg cgcaggtcgt gtacccggag tcgcgcgtct gggtggactg
     1561 ggacgagcag gggaaccgcc tcgtgtccac ggtgctcgag ccgaacatcg ccggcggcat
     1621 gatcgtgctc acgctcatcg tgcagctcgc gcagctcgcg ggcggcgagc gggtcgccct
     1681 gtggaagccg ttcgtgatgt tctccgcaca ggtcgcgacg ctgtcgcgga gctcgttcgt
     1741 ggcgttgttc gtgggcggcc tgatcatcct ctccgtgcga ggggtgtccc gacggatgct
     1801 gcgattcggc gcgatggtcg ccgtggcggt cgccgtcgcg tcgcccaagc tcatccagta
     1861 tgcgcagtcg tacacgaagc ttgaggtcga cgcctcggcg atgacgcgcg tgaccaactg
     1921 gctgcgagcg ctccgcgtgt tcgccgacaa cccgatcatc ggcgtcgggt tcaacacgtt
     1981 cggctacgtg ggggagtcgt acggctggcc gaggaagggg ctggccacga attcgaccga
     2041 cggcggacta ctcttcatcg ccgtcatgac ggggatcgtc ggcctcagcc tgtacctcac
     2101 gatgctggcg gcggtggttc gtcgctgtcg gcgcgtgtgg cgtgaccggg cgacgtctca
     2161 ggcgttccgg tcgctggcgg tcggcatcgg cgcggcgacg atcgccatct gcgtccagag
     2221 cttcttcgtc aacagcctcc tcaccgtgtt cgtgatggag cccctgtgga tcctgtgggg
     2281 cctcgcgtcg gtgctcgcat ggcagatcac gccggcgccg gtggtccgtc cgttcgcgcg
     2341 agtggtcgcg atcgcgggcg cgccatccga tcgccgcagc ctctcccttc acccctgacg
     2401 gccgcatgtc ccacgctccc ctccctgttc ccgccgtcga gccggcccgt tcccgctgcg
     2461 tggtgtgcgg cagcacgcag ggcgaggcgg tcttcaacga gttcggcgtg gacgttcggc
     2521 aatgcgccga gtgcgggcac gtgtactcgt cgtggccggg tggtgaggac tacgacggct
     2581 atttcagcgc ggcaccgatc gatccgcagg cggcgcagcg gttctgggac gaacagcacg
     2641 cgcggatgta cgacgacttc atcggccgct atctcgccgg acggcagggg cgactgctcg
     2701 acgtcggctg cgggctcggg tacttcgtga agcgcgccgc caccgtgccg gggtgggagg
     2761 cgcacggcta cgagatctcg cggcaggccg tcacgtacgc gcgcgagacg ctggggctga
     2821 cgaacgtcca ctgcggcaag gtcgaagact cgcacttcgc gcccggaagc ttcgacgtca
     2881 tcaccctgtg ggacgtgatc gagcacatcc ccaacccgga tcccctgctc gcccacctct
     2941 gttcgctgct cgcgcccggc ggcatgctgt gcatgcacac gccgaacgcc gtgatccagc
     3001 tgcccaaggc gaggctgaag cgccggctgc gcggcatgca gccggggctc cactatctcg
     3061 aggcacggga tcacatcaac ctctacaagg tgtcgacgct tcgccgggtg ctggaacgca
     3121 acgggtttca cgacgtgc
//
LOCUS       DASSYW010001126         2177 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_915359, whole genome shotgun sequence.
ACCESSION   DASSYW010001126 DASSYW010000000
VERSION     DASSYW010001126.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2177)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2177)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2177
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_915359"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(152..1465)
                     /locus_tag="VFN38_17750"
     CDS             complement(152..1465)
                     /locus_tag="VFN38_17750"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HET9013675.1"
                     /translation="MRNGGLTRASAEARGPGSETGKLLRAYHERGDARARQRLVELYL
                     PLVESFTRRYAHTADEHDDIYQVGCIGLLNAIDRFELSRGDELAAFAVPNIAGEIRRY
                     LRDRGSVRLPRRILELRSAAAQAQGELRAQLGHEPTTSEIAAELEAEESDVALALDTG
                     ASQAVELQAEPEGADEALDTAEDRLFLSDAFRELDERERRIVFLRYIRDAEPDAIAGD
                     LGISRRQLARTTEQALGKLRRGLEQPAAPPPIRSPEPSPHETVEPKMAAAPSADQEQR
                     QIDQPYHIELLKSEAADGGWTAKVDELPGCTAEGASPGEAAARVQEAMRDWIARAVAD
                     GRDVPKPRSAASHSGRLLVRMPQSLHAELARAAEREEVSLNQFITSSLASAVSWRGSG
                     EHAIPADAAAPRSRGLRRALMANIVLLVLIAVLAIVLLIVALSRG"
     gene            1632..>2177
                     /locus_tag="VFN38_17755"
     CDS             1632..>2177
                     /locus_tag="VFN38_17755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013676.1"
                     /translation="MKLIVCIAIGIVVASQVEAQAAAPDPLQPPLVNTFTIPSGVGNP
                     WGTAIDRAGNVWFAEPGCDFMPTCPAETPPGQIGKLNPSSGRFSYYTLPDIPGNQPIF
                     LEFDRSGHLWFTTPNNSMIGEFRPSTRRFIGQWPVTPGSGPWDLTFAKGRLWYTEYLV
                     SAVGSFDPATHLHQDFQTPTAG"
BASE COUNT          327 a          764 c          732 g          354 t
ORIGIN      
        1 cttccgcggc cacaagcgag tgctcgcggc cggctcctac cactggtacg tgtggccggg
       61 atacggcaag cgttccaagc atcgctacgg caagctgatc gcgcatcgcc gcttcaagat
      121 cgccccggcg caggccgcgc ggctgcgctg actacccgcg cgagagcgcg acgatcagca
      181 gcacgatcgc gagcaccgcg atcaggacga gcaggacgat gttggccatc aacgccctgc
      241 gcaggccgcg gctacgtgga gcggccgcat cggccggtat ggcgtgctcg ccactgccgc
      301 gccagctcac ggcgctcgcg agcgagctcg tgatgaactg gttgaggctg acctcctcgc
      361 gctcggccgc ccgcgcgagc tccgcgtgca gcgactgcgg catccgaacg agcaggcgac
      421 cgctgtgcga cgcggccgag cgcggcttcg gaacgtcgcg cccgtcggcc acggctcgag
      481 cgatccaatc gcgcatcgcc tcctgcacgc gagccgctgc ttctcccggg ctcgcgccct
      541 cggcggtgca cccggggagc tcatcgacct tggctgtcca gccgccgtcg gcggcttctg
      601 acttcagcaa ctcgatgtgg tagggctggt cgatctgccg ttgctcttgg tccgctgaag
      661 gagccgcagc catcttaggt tcgactgtct catgcggcga gggttcaggc gagcgaatcg
      721 ggggaggagc cgcaggctgc tcgagcccgc ggcgcagctt cccgagcgcc tgctcggtgg
      781 ttcgcgcgag ctggcggcgg gagatcccaa ggtcgccggc gatggcgtca ggttcggcgt
      841 cgcggatgta gcgcaggaac acgatccgcc gttcccgttc gtccagctcg cgaaaggcgt
      901 ccgagaggaa gagccgatcc tccgcggtgt cgagtgcctc gtccgcgcct tccggctcgg
      961 cttgcagctc gacggcctgc gacgcgccgg tgtccagcgc cagggcgacg tcgctctcct
     1021 ccgcttcgag ctcggccgcg atttccgacg tggtcggctc gtggccgagc tgcgcgcgca
     1081 actcgccctg cgcctgcgcc gcggccgagc gcagttcgag gatccggcgc ggcagccgga
     1141 cgctgccgcg gtcacgcagg tagcggcgga tctcgccggc gatgttcgga accgcgaagg
     1201 cagccagctc gtcgccgcgc gacagctcga agcggtcgat ggcgttgagc agcccgatgc
     1261 agccgacttg gtagatgtcg tcgtgctcgt cggccgtgtg cgcgtagcgc cgcgtgaatg
     1321 actcgaccaa gggcaggtag agctcgacca gtcgttgccg cgcccgggca tcgccgcgct
     1381 cgtggtacgc gcgcagaagc ttgcccgtct ccgatccagg tccacgcgcc tcagcactcg
     1441 cgcgtgtgag gcctccgttc ctcacatgac cagactaagc acggcaagcg cgcgatatca
     1501 cgcttttttc gaccgatagc acggacgatt cgctgaaacg acgtccggct accacgacgg
     1561 gggggtacgt acggggcgtg ctcgggcgac gcgggtgccg gcccgctcgt ccgggcccgc
     1621 acatgacttt cgtgaagctc attgtctgca tcgccatcgg catcgtcgtt gcgtcacagg
     1681 ttgaagcgca ggcggcagca ccggacccgc tgcagccgcc gctcgtcaac acgttcacca
     1741 tcccgagcgg tgtggggaac ccttggggga cggcgatcga ccgcgccggc aacgtctggt
     1801 tcgccgagcc cggatgcgac ttcatgccga cgtgccccgc cgagacaccc ccgggtcaga
     1861 tcggcaagct caatccgtcg tcggggcgct tcagctatta cacgctcccc gacatccccg
     1921 gcaatcagcc gatctttctc gagttcgaca ggtcgggtca cctctggttc acgaccccga
     1981 acaacagcat gatcggcgag ttcagaccgt ccacgcggag gttcatcggt cagtggcctg
     2041 tgacccccgg aagcgggcct tgggacctca ccttcgcgaa ggggcggctc tggtacacgg
     2101 agtacctggt gtctgcggtg ggctcattcg acccagccac ccacctccat caggacttcc
     2161 agacgccgac cgccggc
//
LOCUS       DASSYW010001127         3857 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1275841, whole genome shotgun sequence.
ACCESSION   DASSYW010001127 DASSYW010000000
VERSION     DASSYW010001127.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3857)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3857)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3857
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1275841"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1935
                     /locus_tag="VFN38_17760"
     CDS             <1..1935
                     /locus_tag="VFN38_17760"
                     /inference="COORDINATES: protein motif:HMM:NF014427.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HET9013677.1"
                     /translation="TAVAPGSASIVATSEGVKGEIAVSVSQAAVASVTVNLIAGSLAV
                     GQTAQATATALDASGKALSGRVVTWTITPTSVATVSSSGVVTAVAAGSATLTATVEGK
                     SASVTVTVTAPVVVTQPPPSGALTVMPELPRAVVVTATSATPSNGASIRVPAGGDLQG
                     AIDQAKPGDVILLAPGASYTGNFVLRAKSGAGDGAWITIRTETTLPAEGTRVTPTTAA
                     SFAKLLTPNASPVIATDPAASYYRISGVAIAPGATSTLAYGLVAFGDAGPAQNTLASV
                     PHHLIVDRSYIHSSATFNLRRCVAVHSAWTAVVDSWLADCHSNDGDSQAIWGSNGPGP
                     FTIVNNYLEGAGENVMFGGADSRAPALLPADITLRRNHIVKPASWVGVWTVKNLLELK
                     VGQRVLVEGNLLEGAWVSGQIGFAILLKSSDQDNTAPWSTTQDVTLRLNRISRAAAGI
                     SVMGTIAGDLVTNSTARVLVEHNLIDPVGDPALGGVGRLFQSGATTPPRDVVYRHNTG
                     FGTNAGFIFTEGSQPGFVFLDNVVNGHPDYQWSFSSSDGHGVATAALDYHAPGWKVAG
                     NVIVGGGVQVRPPDNFFPATMGEVGFTDAGGAIGTSFTPGDYRLTASSPYKGKATDGT
                     DPGVDFGRLSTALAGVRVQP"
     gene            2201..>3857
                     /gene="asnB"
                     /locus_tag="VFN38_17765"
     CDS             2201..>3857
                     /gene="asnB"
                     /locus_tag="VFN38_17765"
                     /EC_number="6.3.5.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR01536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004066 - asparagine synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006529 - asparagine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase (glutamine-hydrolyzing)"
                     /protein_id="HET9013678.1"
                     /translation="MVGAADPQVAREAVDRMTTALERRGPDSGGSECWPQAVLGHRRL
                     SIFDLSAAGHQPMLSDDRAVGVAFNGAVYNFRALRAELEGQGHHFRSQTDTEVLVRGY
                     AAWGIDALVARLRGMFAFALWDERRGRLFLVRDRLGVKRLLYAVRGGALAFASTARAL
                     HAAGFGGELDELAVAEFLEYGFVTDERSIYGGVRKVPAASIVEWADGASSTRTYWTPP
                     AAASSIAASFDEVVDETERLLLQAVERRLQADVPVGALLSGGIDSGLVCWAIKALGGD
                     VTAFTVGTAGDASDESDEAAATARELGLRHTVLQLEGTQPTDVHDLVAAYAEPFACAS
                     ALGMLRISHAVSRSNVKVLLTGDGGDDVFLGYERHRFLQVAQRIARGTPAGVATAWRG
                     LRRVLPMVGPVRRAAHFADYATGGMGAFLTAREGFPGMRARGLLGERLRDARLAQREI
                     PWSIESARHILDEYLEHDRRTQFVAEYMTKVDGSTMYYALEARSPFLDQDLWEYAAGL
                     PIDLRLRGGELKAVLRALARRRIGARVATGRKRGFTIPVERWMA"
BASE COUNT          523 a         1382 c         1440 g          512 t
ORIGIN      
        1 accgcggttg cgccgggctc ggcgtcgatc gtcgcgacga gcgaaggagt gaagggagag
       61 atcgcggtga gcgtctcgca ggccgcggtc gcctcggtga ccgtgaacct gatcgccggc
      121 tcgctcgccg tcgggcagac ggcgcaggcg acggccaccg cgctcgacgc gagcgggaag
      181 gcgctctcgg gccgcgtggt gacgtggacg atcaccccga cctcggtggc gacggtgtcc
      241 tcgagcggcg tggtcaccgc ggtcgcggcc ggtagcgcga ctctcaccgc cacggtggag
      301 gggaagagcg cgtcggtgac ggtgaccgtc accgcgccgg tggtcgtgac gcagccgccg
      361 ccgagcggcg cgctcaccgt gatgccggag ctgccgcgcg ccgtcgtggt gacggcgacg
      421 tcggcgacgc cgtcgaacgg cgcgagcatc cgcgtgccgg ccggcggcga cctgcagggc
      481 gcgatcgacc aggcgaagcc gggcgacgtg atcctgctcg cgcccggcgc cagctacacg
      541 ggcaacttcg tcctccgcgc gaagagcggg gcgggcgacg gagcctggat cacgatccgc
      601 accgagacga cgctgcccgc cgaggggacg cgcgtcaccc cgacgacggc ggcctcgttc
      661 gcgaagctcc tcacgcccaa cgcgtcgccc gtgatcgcga ccgatccggc ggcgagctac
      721 taccgcatct cgggcgtcgc gatcgcgccc ggcgcgacct cgaccctcgc ctacggcctc
      781 gtggccttcg gcgacgcggg ccccgcgcag aacacgctgg cgagcgtgcc gcaccacctg
      841 atcgtggacc gcagctacat ccactccagc gcgaccttca acctgcgccg ctgcgtcgcc
      901 gtgcacagcg cgtggacggc ggtggtggac agctggctgg cggactgcca ctcgaacgac
      961 ggcgactcgc aggccatctg gggctcgaac ggccccgggc cgttcaccat cgtcaacaac
     1021 tacctcgaag gggcggggga gaacgtgatg ttcggcggcg ccgacagccg cgctccggcc
     1081 ctcctcccgg cggacatcac gctgcgccgc aaccacatcg tcaagccggc cagctgggtc
     1141 ggggtctgga cggtgaagaa cctgctcgag ctcaaggtcg gccagcgggt gctggtcgag
     1201 ggcaacctgc tcgagggggc ctgggtctcg gggcagatcg ggttcgccat cctgctgaag
     1261 agctccgacc aggacaacac cgccccctgg agcaccaccc aggacgtcac cctccgcctc
     1321 aaccgcatct cccgcgcggc ggccggcatc agcgtgatgg gcacgatcgc gggtgacctc
     1381 gtcaccaact cgacggcgcg cgtgctggtg gagcacaacc tgatcgaccc ggtgggcgac
     1441 cccgccctgg ggggcgtggg ccggctcttc cagagcgggg cgacgacgcc gccgcgcgac
     1501 gtggtgtacc gccacaacac cggcttcggg accaacgccg gcttcatctt cacggaaggc
     1561 tcgcagccgg ggttcgtctt cctcgacaac gtggtcaacg gccacccgga ctatcagtgg
     1621 agcttctcct cgtccgacgg ccacggcgtg gcgacggcgg cgctcgacta ccacgcgccg
     1681 ggctggaagg tcgccggcaa cgtgatcgtc ggcggcgggg tgcaggttcg cccgcccgac
     1741 aacttcttcc cggccacgat gggggaggtg gggttcacgg atgccggggg cgcgatcggc
     1801 accagcttca cccctggcga ctaccgcctc acggcgagca gcccctacaa ggggaaggcg
     1861 accgacggca ccgatccggg ggtggacttc ggccgcttga gcaccgccct ggccggggtg
     1921 cgggtgcagc cctgagccgg cgccggatgc gagacccggt ccccggaatc gggggaatca
     1981 actaaaattc gagcagggtc gaaggggggc gatgtcgccc cccttcgacg tttccccccg
     2041 ccccggccgc catgaccggc gccgggaatg gggaacccgc ccgtccgggc gcggtatcct
     2101 ccttgcgctc gcctcctcgg cgcgtcgcgt ccctcgcggc ggccacgcgc accgaacccg
     2161 atcgggagtc cgaacagccc tcatgtgtgg aatctccgga atggtcggcg ccgccgaccc
     2221 gcaggtcgcg cgggaggccg tggaccggat gacgacggcg ctcgagcgcc ggggaccgga
     2281 ctccggaggg agcgagtgct ggccgcaggc agtgctcggc caccggcgcc tctcgatctt
     2341 cgacctcagc gcggccggcc atcagccgat gctgagcgac gaccgcgcgg tcggcgtcgc
     2401 gttcaacggg gcggtctaca acttcagggc gctgcgggcc gagctcgagg gccaggggca
     2461 ccacttccgg agccagaccg acaccgaggt gctggtgcgc ggctacgcgg cgtgggggat
     2521 cgacgccctg gtggcccgac tgcgcggcat gttcgccttc gcgctctggg acgagcggcg
     2581 cggccggctc ttcctggtgc gcgatcgtct cggggtgaag cggctgctct acgccgtccg
     2641 cggcggcgcg ctcgccttcg cgtccacggc tcgcgccctc cacgccgcgg ggttcggggg
     2701 ggagctggac gagctggcgg tggcggagtt cctcgagtac ggcttcgtga ccgacgagcg
     2761 ctcgatctac ggcggcgtgc ggaaggtgcc ggcggcgtcc atcgtcgagt gggcggacgg
     2821 cgcgtcgtcc acccgcacgt actggacgcc ccccgccgcc gcgtcgtcga tcgcggcgag
     2881 cttcgacgag gtggtggacg agaccgagcg cctgctgctg caggcggtgg agcgccgtct
     2941 ccaggccgac gtgccggtgg gggcgctgct cagcgggggc atcgactcgg ggctcgtctg
     3001 ctgggcgatc aaggcgctcg gcggcgacgt caccgcgttc acggtcggca cggcggggga
     3061 cgcgtcggac gagagcgacg aggcggccgc cacggcgcgc gagctcggcc tgcggcacac
     3121 ggtgctgcag ctcgaaggca cgcagccgac cgacgtccac gacctcgtgg ccgcctacgc
     3181 cgagccgttc gcctgcgcct cggcgctcgg catgctgcgg atctcgcacg cggtgtcgcg
     3241 ctcgaacgtc aaggtgctgc tcaccggcga cggcggcgac gacgtcttcc tcggctacga
     3301 gcgtcaccgc ttcctgcagg tcgcgcagcg gatcgcccgc ggcacgccgg ccggggtggc
     3361 gaccgcctgg cgcgggctgc gccgcgtcct gccgatggtg gggccggtgc ggcgcgccgc
     3421 gcacttcgcc gactacgcga cggggggaat gggggcgttc ctcacggcgc gcgagggctt
     3481 ccccggcatg cgggcccgcg gcctgctcgg cgagcggctg cgcgacgcgc ggctcgcgca
     3541 gcgcgagatc ccctggtcga tcgagtcggc gcggcacatc ctcgacgaat acctcgagca
     3601 cgaccgccgc acgcagttcg tcgccgagta catgaccaag gtggacggtt cgacgatgta
     3661 ctacgcgctc gaggcgcgct cgcccttcct cgaccaggac ctctgggagt acgcggccgg
     3721 cctgccgatc gacctgcgac tgcgcggcgg cgagctgaag gcggtgctgc gagcgctggc
     3781 ccggcggcgg atcggcgcgc gcgtcgcgac cgggcgcaag cgcggcttca ctatcccggt
     3841 ggagcgctgg atggcgg
//
LOCUS       DASSYW010001128         2505 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1394298, whole genome shotgun sequence.
ACCESSION   DASSYW010001128 DASSYW010000000
VERSION     DASSYW010001128.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2505)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2505)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2505
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1394298"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..633)
                     /locus_tag="VFN38_17770"
     CDS             complement(<1..633)
                     /locus_tag="VFN38_17770"
                     /EC_number="2.3.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acylglycerol-3-phosphate O-acyltransferase"
                     /protein_id="HET9013679.1"
                     /translation="MQPILSAWAWIAAVGVVIFGFFYVAAIWLVTAPFDRGRYHAGRA
                     FRQLAMAASSLNPLWHFETDGEAPADPRHPYVAVSNHESYADIFLISHFPWEMKWLSK
                     DTIFRIPVMGWMMRMAGDIPIKRGRRESVVSAMKGCRDRLGKKVSVMIFPEGTRSKTA
                     ELLPFKDGAFKLAIEAQVPILPIAVAGTRDCMAKHSFAFRRARAKARVLPP"
     gene            complement(664..1128)
                     /locus_tag="VFN38_17775"
     CDS             complement(664..1128)
                     /locus_tag="VFN38_17775"
                     /inference="COORDINATES: protein motif:HMM:NF040124.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6526 family protein"
                     /protein_id="HET9013680.1"
                     /translation="MTATVSTGASAPLAQSYATHRRYFPLFHYFALPILLANVAVAVG
                     HAMRRPTLWNAWLVVLSLGLVAGLVACRASTLHVQNRVIALEMRLRLAALLPPDLRVR
                     IPELRLKHLIGLRFAGDVELPGLVERCLRGELATADAIKREIRDWRPDFARA"
     gene            complement(1162..1629)
                     /locus_tag="VFN38_17780"
     CDS             complement(1162..1629)
                     /locus_tag="VFN38_17780"
                     /inference="COORDINATES: protein motif:HMM:NF014688.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SufE family protein"
                     /protein_id="HET9013681.1"
                     /translation="MTDMAAAQPPQPPRDLPPTVARVLSTFRALGREEKMQALLHFAR
                     KLEPLPERFAALDRAEYTVPECQTRVDLFPELRDGKLYFHADLDPRKSPTIAAFLAIL
                     FSAINGQPPATTLAIPDDFVRQMMEGIGLAGREAGLNAMLARIKRHARNAVSA"
     gene            1716..2141
                     /locus_tag="VFN38_17785"
     CDS             1716..2141
                     /locus_tag="VFN38_17785"
                     /inference="COORDINATES: protein motif:HMM:TIGR03562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family peroxiredoxin"
                     /protein_id="HET9013682.1"
                     /translation="MPTRKANAVWQAGLKGNGTFKGQTGLGGQYNFSSRFENGAGSNP
                     EELLAAAHAACFSMALALGLEKGGFTPTSVETDAACTVEKVGAGFKITRMLLTSRATV
                     PNIDDEKFQAIAAATKEGCPVSGALKGNVQIDLEAKLAR"
     gene            complement(2227..>2505)
                     /locus_tag="VFN38_17790"
     CDS             complement(2227..>2505)
                     /locus_tag="VFN38_17790"
                     /inference="COORDINATES: protein motif:HMM:NF019592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /protein_id="HET9013683.1"
                     /translation="ALIDARRAANQQPAYTGGLDAASVLTELFDQRAREFFLEGKRLA
                     DFRRNPAATRFVPATGSAYVKPGYAAVGSQTCYPIPRAERDNNPNLKL"
BASE COUNT          406 a          795 c          949 g          355 t
ORIGIN      
        1 ggggggcagc acgcgcgcct tggcgcgggc gcgccggaag gcgaagctgt gcttcgccat
       61 gcagtcgcgc gtcccggcca cggcgatcgg caggatcggc acctgcgcct cgatggccag
      121 cttgaaggcg ccgtccttga acggcagcag ctccgcggtc ttcgatcgcg tgccctcggg
      181 gaagatcatc acgctcacct tcttcccgag ccggtcgcgg cagcccttca tcgcgctcac
      241 cacgctctcg cgccggccgc gcttgatcgg gatgtcgccc gccatgcgca tcatccagcc
      301 catgacgggg atcctgaaga tcgtgtcctt cgacagccac ttcatctccc acgggaagtg
      361 gctgatgagg aagatgtcgg cgtacgattc gtggttggac accgcgacgt agggatgccg
      421 cgggtcggcg ggcgcctcgc cgtcggtctc gaagtgccag agcggattga ggctggacgc
      481 ggccatcgcg agctggcgaa aggcgcggcc ggcgtggtac cggccgcggt cgaagggggc
      541 ggtgaccagc cagatggcgg cgacgtagaa gaagccgaag atcacgacgc cgacggcggc
      601 gatccaggcc caggcgctga ggatgggttg catgtcggaa cgcgtggagc gagcgaagcc
      661 gcgctaggcg cgggcgaagt cgggccgcca gtcgcgaatc tcgcgcttga tggcgtcggc
      721 ggtcgcaagc tcgccacgca ggcatcgctc caccagcccc ggcagctcga catcgccggc
      781 gaaccggagg ccgatgagat gcttcagccg cagctcggga atgcggacgc ggaggtcggg
      841 ggggagcagc gcggcgagcc gcagccgcat ctccagcgcg atcacccggt tctgcacgtg
      901 cagggtggag gcccggcagg ccacgaggcc ggccaccagc cccagggaga ggaccaccag
      961 ccacgcattc cagagcgtcg gtcggcgcat cgcatgcccg acggcgaccg cgacgttggc
     1021 gaggaggatc ggcagcgcga agtaatggaa gagcgggaag taccggcggt gcgtcgcgta
     1081 gctctgcgcg aggggcgcgg aggcgccggt ggacacggtc gcggtcatgg gcgctccggg
     1141 tgagggttga agggtgggag gtcaggcgct cacggcgttc cgggcgtgcc gcttgatccg
     1201 cgcgagcatg gcgttcagcc cggcctcgcg gccggcgagg ccgatgccct ccatcatctg
     1261 acggacgaag tcgtcgggga tggcgagcgt cgtcgccggc ggctggccgt tgatggccga
     1321 gaacaggata gcgagaaagg cggcgatggt gggggacttc cgcggatcga ggtcggcatg
     1381 gaagtagagc ttgccgtcgc gcagctcggg gaacagatcg acgcgcgtct ggcattccgg
     1441 tacggtgtac tccgcgcggt cgagcgcggc gaagcgctcc gggagcggct cgagcttcct
     1501 ggcgaagtgc agcagcgcct gcatcttctc ctcgcgcccg agggcgcgga acgtgctcag
     1561 tacgcgcgcc acggttggcg ggaggtcccg cggaggctgc gggggctgcg cggcggccat
     1621 gtccgtcatg gcaggagata aaccgaccgg gggatgacgc gtcaagcgcc gccgtccttc
     1681 cggccttcac cagtatccag cacgaggatc gagagatgcc gacgagaaag gcgaacgcgg
     1741 tgtggcaggc cgggctgaag gggaacggga cgttcaaggg ccagacggga ctcggtggcc
     1801 agtacaactt ctcttcgcgc ttcgagaacg gggcaggctc gaatccggag gagctgctgg
     1861 ccgcggcgca cgcggcctgc ttcagcatgg cgctcgccct ggggctcgag aaggggggct
     1921 tcaccccgac gagcgtggag acggacgccg cctgcacggt ggagaaggtc ggcgcggggt
     1981 tcaagatcac ccgcatgctc ctgacgtcgc gcgccacggt gccgaacatc gacgacgaga
     2041 agttccaggc gatcgccgcg gcgaccaagg aaggatgtcc cgtgtcgggc gcgctcaagg
     2101 ggaacgtcca gatcgatctc gaggcgaagc tggccaggta gtgccgcatc acgacgcaga
     2161 agggcggaca gcctgcgctg cccgcccttc cgtgtcgcta ccgggatgcc gtcccctgcc
     2221 tgccgactac agcttcaggt tggggttgtt gtcccgctcc gcgcgcggga tcggatagca
     2281 ggtctggctt ccgacggccg cgtagcccgg cttgacgtac gccgaaccgg tggccggcac
     2341 gaagcgcgtc gccgccggat tgcgccggaa gtcggcgagc cgcttcccct cgaggaagaa
     2401 ctcgcgcgcg cgctggtcga acaactccgt gagcacgctg gccgcatcca gtccgccggt
     2461 gtacgccggc tgctggttgg cggcacgccg tgcgtcgatg agtgc
//
LOCUS       DASSYW010001129         2082 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_59888, whole genome shotgun sequence.
ACCESSION   DASSYW010001129 DASSYW010000000
VERSION     DASSYW010001129.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2082)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2082)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2082
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_59888"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(173..1411)
                     /locus_tag="VFN38_17795"
     CDS             complement(173..1411)
                     /locus_tag="VFN38_17795"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HET9013684.1"
                     /translation="MRLALCLSCWLAAAPAAAGQISAAQAPPLQTPLTLAAAIDRAMS
                     GNPAIIAARSRRAIGTAGVGVAGERLNPEGRVEFDRDTPRQAYTLAVPWETGGKRGRR
                     LDVAQASVRTIEAEIGLVIAQTRSAVRGAYFDLLIASSRVALLEDLQGLATRARDTAQ
                     QRFDAGDAARLEVLQAELARAQAQNEAAGARGTVVAARAKLNALLGFAIDAPTELVEP
                     DLGAPVAFDAAMLRARAASTELAVLDRRIEEQRARIALAHALRSPDITPEGSVTHGFG
                     ADAEFQTGWKAAVAIAVPIFTTHKAGLRLEEVTLAQLTAEREATVSRVAGDVAAATAV
                     AGAQREQYLRYRDQIVPQAVEVENLAQDAYRLGQTGIAAYLQALQAARDVRLRSLQAQ
                     ADLQTALTDLERAIGAPLLP"
     gene            1498..1635
                     /locus_tag="VFN38_17800"
     CDS             1498..1635
                     /locus_tag="VFN38_17800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013685.1"
                     /translation="MTHAEHKMLVRGVAGGTLMGVVIGLMLALVIALKPEFFAGLVRY
                     L"
     gene            complement(1815..>2082)
                     /locus_tag="VFN38_17805"
     CDS             complement(1815..>2082)
                     /locus_tag="VFN38_17805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013686.1"
                     /translation="VRAPPAFGVKAGNVLGIARMGLSNHWETGPGDQAYGRRQTFGST
                     DRIEYLGPFSGTSRRIAGSMSGSPGINVSPQTTAGFEATRASGD"
BASE COUNT          326 a          700 c          718 g          338 t
ORIGIN      
        1 ggtgccgccg tgacgggacc cgtcaccgtc aacgtggcgc ggatggtgcc gaccgcggct
       61 gcctccgtgg tgacgggcac gaccgtgtcg ctcgttacct cttcgacggg ttcacggctg
      121 cagccggcga tcgagacgag caggacgagg ccggcgacgg cagcgcgggt gatcatggca
      181 gcagcggcgc gccgatcgcg cgttcgaggt ctgtgagtgc ggtttggaga tccgcttgcg
      241 cctgcagtga tcgcagccgg acgtcgcgag cggcctgcag cgcctggagg tacgcggcga
      301 ttccggtctg tccgagccgg taagcgtcct gcgccaggtt ctcgacctcc actgcctgcg
      361 gaacgatctg gtcgcgatag cgcaggtatt gctcgcgctg ggcaccggcc acggccgtcg
      421 cggcggcgac atcgccggcg acgcgcgata cggtcgcctc gcgctcggct gtcagctgcg
      481 ccaacgtcac ttcctcgagc cggagaccag ccttgtgggt ggtgaagatc ggcaccgcaa
      541 tcgcgacggc tgccttccag ccggtttgaa actccgcgtc ggcgccgaag ccgtgcgtca
      601 cgctgccttc gggcgtgatg tcggggctcc ggagcgcgtg cgccagagcg atccgggcgc
      661 gctgttcctc gatccgccga tcgagcacgg ccagctcggt actggcggca cgagcccgca
      721 acatggccgc gtcgaaggcg accggcgcgc cgaggtcggg ctcgaccagc tcggtgggcg
      781 cgtcgatcgc aaacccgagc agcgcgttca gtttcgcgcg cgccgcgacg acggtgccgc
      841 gagcgccggc ggcctcgttc tgcgcctgag cgcgcgccag ttcggcctgc agcacttcga
      901 ggcgggcagc gtctccggca tcgaaccgct gctgcgccgt gtcgcgcgcg cgcgtggcga
      961 gtccttgcag atcctcgagc aacgcgacac gcgacgaggc gatcagcaga tcgaagtagg
     1021 cgccacggac ggcgctccgc gtctgtgcga tcaccaggcc gatttccgcc tcgatcgtcc
     1081 gcaccgaggc ttgcgcaacg tcgagtcgcc ggccgcgctt cccaccggtt tcccagggca
     1141 cggcgagcgt gtaggcctgc cggggagtgt cgcggtcgaa ctccacgcgc ccttcgggat
     1201 tgagacgttc gccggcaacg cctacgccgg cggtgccgat ggcccgccgc gaacgcgccg
     1261 caatgatggc ggggtttcca gacatcgccc gatcgatggc ggccgcgagc gtcagcggcg
     1321 tttgaagtgg cggagcttgt gccgctgaaa tctgccctgc ggcggccggc gccgccgcca
     1381 gccagcacga caggcagaga gcaagacgca cccgcgaagt atggggcacc acggatgaac
     1441 ggaaaatgac acgactgagc gctgtggtag ggtagcggca gcttgtggaa agctgacatg
     1501 acacacgcgg aacacaagat gctcgtgcgc ggagtggctg gtggcacact catgggtgtg
     1561 gtcatcggcc tcatgctcgc gctggtcatc gcgctgaagc cggaattctt tgcagggctg
     1621 gtgcggtatc tctaacgcgc tgaggagatc ctcatgcgga tcactcccat cattgcgttc
     1681 gtcgccgtcg ttcagatcgg gtcggcttcg atcgaggcgc agcagccgtc gaacggattg
     1741 gcgccacgag cgaacgtgtt cgggagcaag cctccctcgc cgccacgctt cctgtttccg
     1801 acgccaacgt tcagtcagtc gccagacgcc cgcgtcgcct cgaaaccggc ggtcgtctgt
     1861 gggctgacgt tgatccctgg cgatcccgac atcgacccgg caatccgtcg cgaagtcccc
     1921 gaaaacggtc ccaggtactc gatccgatcc gtcgacccga aagtctgccg acgaccgtag
     1981 gcctgatcgc ctggaccggt ttcccaatga ttcgacaggc ccatgcgggc gatgccgagc
     2041 acattgcccg ctttcacacc gaaagctggc ggcgcacgta cc
//
LOCUS       DASSYW010001130         2531 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_159830, whole genome shotgun sequence.
ACCESSION   DASSYW010001130 DASSYW010000000
VERSION     DASSYW010001130.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2531)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2531)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2531
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_159830"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..601)
                     /locus_tag="VFN38_17810"
     CDS             complement(<1..601)
                     /locus_tag="VFN38_17810"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HET9013687.1"
                     /translation="MQSVHILRRIARRAAAGALAGGVVASSLTLASAPTRGQTPSSVA
                     PASRAATAAVEPRVDSTPLRLAALYEKAAQLNPRLEAARALARAADARVPGTQRLPDP
                     QLQLGLMNRSLPSLAPMDPLGMTQLQVMQMVPIAGKLPLAGNVASARADAARERADDV
                     RWEVRSRVAMAFYDLYRTDRSLEVADGTRRLLENVARTAQ"
     gene            complement(1337..1681)
                     /locus_tag="VFN38_17815"
     CDS             complement(1337..1681)
                     /locus_tag="VFN38_17815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013688.1"
                     /translation="MFGFLKFLFASAVTLVFLIPAALLLAVIGLPVAVVLCVLALPVL
                     IVLFIVGLPVFLVLLVIGAVVGVLFGVLGAFVGLTAAAIKLVLFVVLPIAFVAWLLMR
                     LFGRSRRSVHYA"
     gene            2031..>2531
                     /locus_tag="VFN38_17820"
     CDS             2031..>2531
                     /locus_tag="VFN38_17820"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HET9013689.1"
                     /translation="MRSYAHGTSPIPLLGETIGENLRRTAERHADRDALVVRSQRYRA
                     TYRELYDSTSALARSLIASGIEPRDRVGIWAPNRFEWVITQFAAARVGAILVNINPAY
                     KSTELRYALQQSGVKLLLLARAFRGTDYVELLDDVRADCVALGESIVLDDEWVDFLER
                     GASVTEG"
BASE COUNT          435 a          863 c          873 g          360 t
ORIGIN      
        1 actgcgcggt tctcgccacg ttctcgagca accgtcgcgt gccgtccgcc acctcgagcg
       61 agcggtcggt gcgatacaga tcgtagaacg ccatcgcgac gcgactgcgc acctcccagc
      121 gaacgtcgtc ggcgcgctcg cgcgccgcgt cagcccgcgc cgatgccacg ttgccggcga
      181 gcggcagctt tcccgcgatc ggcaccatct gcatgacctg cagctgcgtc atgcctaacg
      241 ggtccatcgg ggcgagtgat ggcagcgacc ggttcatgag accgagctga agctgcggat
      301 cgggcagtcg ctgtgtgccg gggacgcggg cgtccgccgc ccgcgccaat gcccgggccg
      361 cctcgagccg ggggttgagc tgcgccgctt tttcgtacag ggcagccagc cgcagcggcg
      421 tcgagtcgac tcgcggctcg acagccgcag tcgcggcgcg cgacgccggc gcgaccgacg
      481 acggagtctg gccgcgcgtc ggagcggaag ccagcgttag gctcgacgcg acgaccccgc
      541 ctgcgagcgc tccagcggcg gctcgacgcg cgatgcgtct gagaatgtgg actgattgca
      601 cggggtaacc tcgaacggtt cgccggagcg acaggcgctc tcggattcgc tcgccagagg
      661 cgcggtgcgc attgcaccgg cgtggcgctc acacgtggac gtgagcgaga tcagccgcgc
      721 gggggtgggc gatcgggggc cgcggtggtg gacttcaggt cggggcagcg actccagcgt
      781 ggcgtcgacg tcggcgcctg gcgcatgccc acgacggaga gctcagcaag cgctggcgcc
      841 gcggcgcaat gcgcgctgca gcacggcgcg cccgcgggca tccccgggat gccgcaatcg
      901 ccgccagtct ctcccatgca tccgtgcgtc ccgcatggag cgaccctggc ctcgccggca
      961 cgagccgttg atccggcaac gtgttgggca tggtcatggt tcggcgcgaa gtgccgagcc
     1021 gcttggctgt gcaggtgcct ctgagccgcc gccggaccgg ccgcatgtgc gtcgcgaacg
     1081 ccgatcacac ccactatcga gggggtgaac agcgtggcga cgatcatgac gatcagcgta
     1141 ccgacccgac gtgtgcagtg catcgacccg accggatgag tgcctcaatg acgcatccgt
     1201 cggcggcgcc cgtgggcacc gccgagacgt aatcgagttt accgcgcgag gtggagggac
     1261 cgtgtccggc tgacgccgga ttccgtgtca ggggtttccc ggcacccgcg tcgatcgcag
     1321 gtcgaaggag agctcttcag gcgtaatgga cggatcgtcg cgagcggccg aagaggcgca
     1381 tcagcagcca cgcgacgaac gcgatcggca gtacgacgaa gagcaccagc ttgatcgccg
     1441 ccgcggtgag tccgacgaaa gccccgagca cgccgaatag gacgccgacg accgcgccga
     1501 tcaccagcag caccaggaat accgggagcc cgacgatgaa gagcacgatc agcaccggca
     1561 gcgccagcac gcacagcacg acggcgacgg gcaaaccgat cacggccagg aggagcgcag
     1621 ccggaatcag aaagacgagg gtgaccgcgc tcgcgaacag gaatttcaga aagccgaaca
     1681 tgccgagcct ccagtgagag ccagagaacg acagctctcc ctacgtcgcc acagcgacta
     1741 cgcgtttcaa ccgacccggc gactggccat gatccccctg ccggccgtcc cgcggcgttc
     1801 aggcaacctg tgctgcgggc aaatctctcg atgatgcggc gagatcggcg agctcgaacg
     1861 gtttcggcag caccggaaaa ctggagtgtc gccgctcaca accggggcta cggcgccgcg
     1921 ccgtagggtg gaaccgaccc gcccgccaac aggtgcgtcc tccccatggc ctcggcgacg
     1981 tatcatgttc gtccccgtcg actcgccgcg aactccacag agaccctgcc atgcgctcgt
     2041 acgctcacgg gaccagcccc attccgctgc tcggggaaac cattggtgag aatctccgcc
     2101 gcaccgcgga gcgccacgcg gatcgcgacg cgctcgtcgt ccggtcgcag cgatatcgcg
     2161 cgacgtaccg ggagctctac gactcgacgt cggcgctcgc ccggtcgctg atcgccagcg
     2221 gcatcgagcc gcgcgaccgc gtcggcatct gggcgccgaa tcggttcgag tgggtcatca
     2281 cgcaattcgc tgccgcgcgg gtcggtgcga tcctcgtgaa catcaatccg gcgtacaaat
     2341 cgaccgagct gcggtacgcg ttgcagcagt cgggcgtgaa gctcctgttg ctggccagag
     2401 cgtttcgcgg gaccgactac gtggagttgc tcgatgacgt gcgcgcggac tgcgtcgcgc
     2461 tcggcgagtc gatcgtcctc gacgacgagt gggtcgactt cctcgaacgc ggcgcgtcgg
     2521 tcaccgaggg a
//
LOCUS       DASSYW010001131         3753 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1269673, whole genome shotgun sequence.
ACCESSION   DASSYW010001131 DASSYW010000000
VERSION     DASSYW010001131.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3753)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3753)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3753
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1269673"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..201
                     /locus_tag="VFN38_17825"
     CDS             <1..201
                     /locus_tag="VFN38_17825"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane glutamic
                     endopeptidase"
                     /protein_id="HET9013690.1"
                     /translation="GMVFCLVYEWTGTLYAPIAMHAFNNMLAYTTVTDGAAVSLVVGA
                     IAITGYIYAARRSTHRALQYAR"
     gene            286..1281
                     /locus_tag="VFN38_17830"
     CDS             286..1281
                     /locus_tag="VFN38_17830"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HET9013691.1"
                     /translation="MKTFLTALAASLVLAPAALAQVPTTPTTPAAPAPAPAPAPQSAK
                     MSVHVVGASIDHGTRYFVAGQRISVAGTITPFVEGERVTVVLYRGKRIASRKKVTTKK
                     SGNKGAFSVAFPVRKAGSYSVRAYHKASAGQQKATTKKVAFRAFVGKAGGGSHGAKVR
                     LLQRSLARMGYVTSRGGRYDGATSCAVLAYRKVNGMGRNGFASKAVFLKALKGRGTFK
                     LRYPRAGKHVEFDWSRQVLVLASGGRAQRIYHASSGKPSTPTVFGTFHFYRKQPGTNS
                     HGMVYSNYFIRGYAIHGYASVPNYAASHGCIRVPIPNAVSIYRWVNLGNPIFVYR"
     gene            complement(1278..1658)
                     /locus_tag="VFN38_17835"
     CDS             complement(1278..1658)
                     /locus_tag="VFN38_17835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013692.1"
                     /translation="MIGSALRLVSLVATVVVVVSFGLYAIDQAREGSDQTLARLEGGE
                     GSKGDAGRNINQADPPPRIERARERRHSDARELVDDANDIVVKPFSGIADSGSIWAQR
                     GVTALLAFLAFGVALRVLAAYVER"
     gene            complement(1655..2767)
                     /locus_tag="VFN38_17840"
     CDS             complement(1655..2767)
                     /locus_tag="VFN38_17840"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HET9013693.1"
                     /translation="MALDALDPFNVRRQLERLSGLRDAAALATDPGFLLNARRALLPL
                     PVVDRRRPVDTDVLPPFESRPIAALRGKRVGVVGGGGGGACVALVGVARALEEAGVEP
                     EAIAACSGSAIWGAMWAGGMTADEMAEFSLSWRPEDYLKVQWIGLPRFALSAVRGFTG
                     LGSGEALERLFDRRLWRMCAGETTIPLHTLGYDMDRGSVEPLGTTHTPELTLGELARI
                     AVARPLVSDAVRVEGDLYVDGAVVDGFPADLLDDGLDHVVGLNVMLPAGFEGEDISGW
                     EQRRSGAADAGRQLEMANQLELARRTRRRLGKRLTLVEPVPYEGLRGMSFYELFLDRR
                     DWPALIRAGYHSTVEALQPLRRRKGGRARSRQGASA"
     gene            2792..3355
                     /gene="pyrE"
                     /locus_tag="VFN38_17845"
     CDS             2792..3355
                     /gene="pyrE"
                     /locus_tag="VFN38_17845"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: protein motif:HMM:TIGR00336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004588 - orotate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HET9013694.1"
                     /translation="MSSLTNPRDRLIAELREQALVIGEVTLTSGKKAQYLVDAKRAIL
                     LPAGFKALGELVAEEARSLGATAVGGITMGADPIACAALAGGADVKAFFVRKERKEHG
                     LARWIEGPPLEPGERCLVVEDVVTTGGSTIKAVERVREEGHEVVGVLAILDRLAGGGE
                     AIERAAGAPYRALTTIDDVYPERPDRA"
     gene            complement(3328..>3753)
                     /locus_tag="VFN38_17850"
     CDS             complement(3328..>3753)
                     /locus_tag="VFN38_17850"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HET9013695.1"
                     /translation="LEEMWRGFASLSDAEARSAFIQTLRGIVDIGGQRVSAADRLYLA
                     QEMPTLFMWGERDPIIPFEHGLAAHELVPHSEIVSFPDAGHFPHRNDPRRFVRELTGF
                     IESTEPSHFDEELIRDLLREGGRAKPRRRTAQARSGRSG"
BASE COUNT          550 a         1416 c         1302 g          485 t
ORIGIN      
        1 gggatggtgt tctgcctcgt gtacgagtgg acgggcacgt tgtacgcccc gatcgccatg
       61 cacgcgttca acaacatgct cgcctacacg accgtcaccg acggcgccgc cgtgtcgctg
      121 gtggtgggcg ccatcgcgat cacgggctat atctacgcgg cccgcaggag cacacacagg
      181 gcactgcagt acgcgcggtg agcggcaggc gtgccgccgc ccccgccgaa aacctccacc
      241 gaaaaccgtg acgggccgcc tggcggcatg aaaggatctt gcgccatgaa aaccttcctg
      301 accgccctcg ccgcctcgct cgtcctggcc cccgcggcgc tcgcccaggt gcccaccacc
      361 cccaccactc cggcggcgcc cgcgccggcc cccgcgcccg cgccgcagag cgccaagatg
      421 tcggtgcacg tggtcggcgc gtcgatcgac cacggcacgc gctacttcgt cgccggccag
      481 cggatctccg tggcgggcac catcaccccg ttcgtcgagg gcgagcgcgt caccgtcgtg
      541 ctctaccgcg gcaagcgcat cgcgtcgcgc aagaaggtga ccacgaagaa gtcgggcaac
      601 aagggcgcgt tctcggtcgc cttcccggtc cgcaaggccg gctcctactc ggtccgcgcc
      661 taccacaagg ccagcgccgg ccagcagaag gccaccacca agaaggtggc gttccgggcg
      721 ttcgtcggca aggccggcgg cgggtcgcac ggcgccaagg tgcgcctgct ccagcgcagc
      781 ctcgcgcgga tgggctacgt cacctcccgc ggcggccgct acgacggcgc cacctcgtgc
      841 gcggtgctcg cctaccgcaa ggtcaacggc atgggccgta acggcttcgc gagcaaggcc
      901 gtgttcctca aggcgctgaa gggccgcggc accttcaagc tgcgctaccc gcgcgccggc
      961 aagcatgtcg agttcgactg gtcgcgccag gtgctcgtgc tcgcgagcgg cggcagggcg
     1021 cagcggatct accacgcgtc gtcgggcaag ccctccacgc ccacggtgtt cggcacgttc
     1081 cacttctacc gcaagcagcc cggcacgaac tcgcacggga tggtctactc gaactacttc
     1141 atccgcgggt acgcgatcca cggctacgcg tcggtgccga actacgcggc aagccacggc
     1201 tgcatccggg tgccgatccc gaacgcggtg tcgatctacc gctgggtgaa cctcggcaac
     1261 ccgatcttcg tgtaccgcta gcgctcgacg taggcggcca gcacccgcag ggccactccg
     1321 aaggccagga acgcgagcag cgcggtgacg ccgcgctgcg cccagatgct gccggagtcg
     1381 gcgatgccgc tgaacggctt caccacgatg tcgttcgcgt cgtccacgag ctcgcgcgcg
     1441 tcgctgtggc gccgctcgcg cgcgcgctcg atccggggcg gcgggtcggc ctggttgatg
     1501 ttccgcccgg cgtcgccctt cgacccctcg ccgccctcca gccgcgccag cgtctggtcc
     1561 gatccctcgc gtgcctggtc gatcgcgtac agcccgaacg agaccaccac gaccaccgtg
     1621 gccaccagcg acacgagccg cagcgccgac ccgatcacgc gctcgccccc tgccgcgagc
     1681 gagcgcggcc gcccttccgg cgccgcagcg gctggagcgc ctcgacggtg gagtggtatc
     1741 cggcgcggat gagcgccggc cagtcgcgcc ggtcgaggaa cagctcgtag aacgacatcc
     1801 cgcgtagccc ctcgtacggc acgggctcca ccagcgtgag ccgcttgccc aggcgccggc
     1861 gagtgcggcg cgcgagctcg agctggttgg ccatctcgag ctggcgcccg gcgtcggccg
     1921 cgcccgaacg gcgctgctcc cagccgctga tgtcctcccc ctcgaatccg gccggcagca
     1981 tcacgttcag gcctacgacg tggtcgagcc cgtcgtcgag cagatcggcc gggaagccgt
     2041 ccaccaccgc gccgtccacg tagaggtcgc cctccacgcg cacggcgtcc gacacgagcg
     2101 gccgcgcgac tgcgattcgc gcaagctcgc cgagggtgag ctcgggagtg tgcgtcgtgc
     2161 cgagcggctc caccgagccg cggtccatgt cgtagccgag cgtgtgcagc gggatcgtgg
     2221 tctcgccggc gcacatgcgc cagagcctgc ggtcgaacag ccgctccagc gcctcgccgc
     2281 tgccgaggcc ggtgaacccg cgcacggccg agagcgcgaa ccgcggcagc ccgatccact
     2341 gcaccttgag gtagtcctcc ggccgccagg agagcgagaa ctcggccatc tcgtcggccg
     2401 tcatcccgcc cgcccacatc gcgccccaga tcgcggagcc ggagcacgcg gcgatcgcct
     2461 cgggctcgac gccggcctcc tcgagcgcgc gcgccacgcc cacgagcgcg acgcaggcgc
     2521 cgcccccgcc gccgcccacc acgcccaccc gcttgccgcg gagcgccgcg atcgggcgcg
     2581 actcgaacgg cggcaggacg tcggtgtcca ccggccggcg ccggtccacc accggcagcg
     2641 ggaggagcgc gcgccgggcg ttcagcagga aaccggggtc ggtggcgagc gccgccgcgt
     2701 cgcgcagccc gctcagacgc tcgagctggc gccgcacgtt gaacgggtcg agggcatcca
     2761 gcgccactgc gtggcagcat acggccgcct catgtcgtcc ctcaccaacc cacgcgaccg
     2821 gctgatcgcc gagctgcgcg agcaggcgct cgtgatcggc gaggtcacgc tcacgagcgg
     2881 aaagaaggct cagtacctcg tggacgcgaa gcgcgcgatc ctgctgccgg ccgggttcaa
     2941 ggcgctcggg gagctggtgg ccgaggaggc gcgctcactc ggcgccaccg cggtgggcgg
     3001 gatcacgatg ggcgccgacc cgatcgcctg cgccgccctt gccggcggcg ccgacgtgaa
     3061 ggcgttcttc gtcaggaagg agcgcaagga gcacggcctg gcacgctgga tcgaggggcc
     3121 gccgctggag ccgggcgagc gctgcctcgt ggtggaggac gtcgtcacca ccggcgggtc
     3181 caccatcaag gccgtcgagc gcgtgcgcga ggagggccac gaggtggtcg gagtgctcgc
     3241 gatcctggac cgcctcgcgg gcggcggcga ggcgatcgag cgcgcggccg gcgctcccta
     3301 ccgcgcgctc accacgatcg acgacgtcta cccggagcgc cctgaccggg cctgagccgt
     3361 acgccggcgc ggcttcgcgc ggccaccctc gcggagcagg tcgcggatca gctcctcgtc
     3421 gaagtgcgac ggctcggtcg actcgatgaa gccggtgagc tcgcggacga accgcctggg
     3481 gtcgttgcgg tgcgggaagt ggcccgcatc cgggaagctg acgatctcgc tgtgcggcac
     3541 gagctcgtgc gcggcgaggc cgtgctcgaa cgggatgatc gggtcgcgct cgccccacat
     3601 gaacagcgtc ggcatctcct gggccaggta gagccggtcg gccgcgctca cgcgctggcc
     3661 gccgatgtcc acgattccgc gcagcgtctg gatgaaggcc gaccgcgcct cggcgtccga
     3721 gagcgaggcg aacccgcgcc acatctcctc gag
//
LOCUS       DASSYW010001132         2298 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1736413, whole genome shotgun sequence.
ACCESSION   DASSYW010001132 DASSYW010000000
VERSION     DASSYW010001132.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2298)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2298)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2298
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1736413"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..703)
                     /locus_tag="VFN38_17855"
     CDS             complement(<1..703)
                     /locus_tag="VFN38_17855"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF019846.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HET9013696.1"
                     /translation="MPDFRDHFAFAARSYASYRPHYPPSLFDWLRSLTPRHQAAWDCG
                     TGSGQAAVALARRFDQVVATDASLAQLANADRAPGVHYLAMKAEQCALASRSVDLVTV
                     AQALHWFDHRRFFAEVDRALRPGGVLAVWSYGLLAVDPAIDPLLARFYEERLGAYWPA
                     ERVLVERGYAGIALPYPELAPPALAMEQSWSLGQLAGFLSTWSAVGRYRAATGVDPVP
                     ELVRELEPAWSPATTR"
     gene            857..1105
                     /locus_tag="VFN38_17860"
     CDS             857..1105
                     /locus_tag="VFN38_17860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013697.1"
                     /translation="MSDSAESAPPTHERRASAQVRVFVDADGTRWQVSERPFSDYDRR
                     HGLSLIFASDAAVRRVRTYPADWASLSDDDLLALSWKA"
     gene            complement(1134..>2298)
                     /locus_tag="VFN38_17865"
     CDS             complement(1134..>2298)
                     /locus_tag="VFN38_17865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013698.1"
                     /translation="AVRADPARRGLLYAGTEHGVYVSWNDGATWRSLSLDLPDTQVPD
                     LVVEGNDLVIATHGRSMYVLDDITPIREWRDDADTASLRLMPVPTATRGVDAAAVQYA
                     LGRRADTVQVEILDGAGRVIRTFTGGTTRADSSRADSTAARATPATPADTIMSPTGCE
                     TPRRRQSAARPGGQPGLNRFAWDLRYPGATTFDCMIIWSASPDQGPVAPPGRYQVRVT
                     ANGIARTQPVVVRMDPRLRGVSAADLREQFDLAMRIRDRVSAANDAVLRIRRMRSQLA
                     ARVAQAPELARQGDSASRALRAVEERLYQVQNRSGQDPLNYPIRINNRMAALGRSVQS
                     GDARPTAAAYVVFRELSAELDVELRRLDAVVASDVAAFDRSAVARGLAPLIRQ"
BASE COUNT          330 a          823 c          837 g          308 t
ORIGIN      
        1 ttctcgtcgt cgccggcgac catgccggct cgagctctcg caccagttcc gggacggggt
       61 cgacgccggt tgccgctcgg tagcgcccga ccgccgacca ggtggagagg aagccggcca
      121 actgcccgag actccagctc tgctccatcg cgagggcggg aggcgcgagc tcgggatagg
      181 ggagggcgat acccgcgtaa ccgcgctcca cgagcacgcg ctcggcgggc cagtacgcgc
      241 cgagcctctc ttcatagaag cgagcgagga gcgggtcgat ggccggatcc accgcgagga
      301 gcccgtagct ccacaccgcg agcacgcctc cgggccgaag cgcgcggtcc acctcggcga
      361 agaagcgtcg atgatcgaac cagtggaggg cctgggcaac cgtgaccaga tccacgctgc
      421 gactcgccag cgcgcactgt tcggccttca tggcgaggta gtgcactccc ggcgcccggt
      481 cggcgttcgc gagctgcgcg aggctcgcgt cggtggcgac cacctggtcg aagcgtcgcg
      541 ccagcgccac ggcggcctgt ccactaccgg tgccgcagtc ccaggcggcc tggtgccgag
      601 gggtcagcga ccggagccag tcgaacaggg acggcgggta gtgcggccgg tagctggcgt
      661 aggagcgggc ggcgaaggcg aaatggtcgc ggaagtccgg catctcggcc gcagatgggc
      721 ggtgggctga aacgatgacg gggcggaggc gtataagatg tacgattgac gcgcgcggca
      781 ttcacagcga gcttgaacgc ctgcacgagc ccggtccgcg ctcttcccgc tggtccatca
      841 ggtccttcgc cgacacatgt cagactccgc cgagagcgct ccaccgacgc acgaacgacg
      901 tgcgtccgct caggtgcgcg tgttcgtcga tgccgacggc acccggtggc aggtctcgga
      961 gcgccccttc tccgactacg accgccggca tgggctctcc ctgatcttcg ccagcgatgc
     1021 ggcggtgcgc cgcgtgcgca cctaccccgc ggattgggcc tccctctcgg acgacgacct
     1081 cctggcgctg agctggaagg cctgagcggc gcgggtcgcc ccgcgccctc gggtcactga
     1141 cggatgagcg gcgccaggcc gcgggcgacc gccgaacggt cgaacgccgc cacgtcggag
     1201 gcgaccaccg catcgagccg ccgcagctcc acatccagct cggccgacag ctcccggaac
     1261 accacgtacg ccgccgccgt ggggcgcgcg tcaccgctct ggacgctgcg acccagcgcg
     1321 gccatccggt tgttgatgcg gatggggtag ttgagcgggt cctgtccgct ccggttctgc
     1381 acctgataga gccgctcctc caccgcccgg agcgcccggg atgccgagtc gccctgccgg
     1441 gccagctcgg gcgcctgcgc gacgcgcgcg gcgagctggc tgcgcatccg gcggatgcgg
     1501 agcaccgcat cgttggctgc cgacacgcga tcgcgaatgc gcatcgccag gtcgaactgc
     1561 tcgcgcaggt cggcggcgct caccccccga agacgcgggt ccatgcgcac caccaccggc
     1621 tgcgtccggg cgatgccatt cgcggtgacc cgcacctgat atcggccggg cggcgcgacc
     1681 ggcccctggt cgggcgacgc gctccagatg atcatgcagt cgaaggtcgt ggcgccggga
     1741 tagcgcaggt cccaggcgaa gcggttgagg cccggctggc cacccggccg cgccgcagac
     1801 tggcgccggc gcggcgtctc gcagcccgtc ggcgacatta tggtgtcggc gggggtggcc
     1861 ggggtggcgc gcgcggcggt cgaatcggcg cgcgacgagt cggcgcgcgt cgtgccgccg
     1921 gtgaaggtgc gaatcacgcg gccggcgcca tccaggatct ccacctgcac ggtgtcggcg
     1981 cgccggccca gcgcgtactg cacggcggcc gcgtcgacgc ctcgcgtcgc cgtgggcacc
     2041 ggcatgagcc gcagcgacgc cgtgtccgcg tcgtcgcgcc actcgcggat aggggtgatg
     2101 tcgtcgagca cgtacatcga ccggccgtgc gtggcgatca ccaggtcgtt cccctcgacg
     2161 acgagatccg gcacctgcgt gtcgggcagg tcgagcgaga gggagcgcca ggtcgcgccg
     2221 tcgttccacg acacgtacac accgtgctcc gtgccggcgt agagcagccc gcgccgtgcc
     2281 ggatccgcgc gcaccgcg
//
LOCUS       DASSYW010001133         2089 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_178649, whole genome shotgun sequence.
ACCESSION   DASSYW010001133 DASSYW010000000
VERSION     DASSYW010001133.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2089)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2089)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2089
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_178649"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..621)
                     /locus_tag="VFN38_17870"
     CDS             complement(<1..621)
                     /locus_tag="VFN38_17870"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HET9013699.1"
                     /translation="MSAPAQLLIVEDKDSLRTMLRHALERHGHVVMEARDQPEAMRIL
                     QTSQAALVLSDLRLPEGDGFGVLRASKEIDPDVPVIVMTAYGSIEDAVTAMKEGALDF
                     LAKPVDPDHLLLLVNRALEQRRLVNENLLMKEELAVRRGAPQLVGDDVSLRKVFSALQ
                     RAAATDATVLIEGESGTGKELFARSLHALSPRAEAPFVAINCAAIPE"
     gene            complement(638..1201)
                     /locus_tag="VFN38_17875"
     CDS             complement(638..1201)
                     /locus_tag="VFN38_17875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013700.1"
                     /translation="MFVVVTESRVGRHQQSAASGSYAAAAGIERLIADLRRLPGWQPV
                     PSMSSASADFNDGRAMPSLADGSSLDLARLTSDRQTASDAFYPAGPNRPVWSLYAHAS
                     IARLISGAPGGPDPYVVAWVADDPDETDGDPSRDSNGVILVRAEAFGTRGAWRAIEAT
                     LSADVVRDVAGVPIMSRVTVMTWREAR"
     gene            complement(1288..>2089)
                     /locus_tag="VFN38_17880"
     CDS             complement(1288..>2089)
                     /locus_tag="VFN38_17880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013701.1"
                     /translation="TADQQQRLRVVAEALRHDLSMAGAGPSRGNGRGPLIRNFPPVLP
                     ARVGLMRADLELTAASDRISIVYVPDTRAQTSLESGMAAATSPLAIDDSTPGCVPATA
                     CDFVPGDRAVIYDPSVEGGPHELLTVAAVDAARALLTPAAPLSRPYAAGARVAIVTVR
                     NYYLDAATGRLMVYDGDRSDVPLIDRVAAMEVGYLADQGGPALQPLPIAQLLDGPVSG
                     EAPNRFDADLLRIRRVRVRLRLQNESPIGSVRDLETTIDVAPPNMAGR"
BASE COUNT          348 a          717 c          724 g          300 t
ORIGIN      
        1 ttccggaatg gcggcacagt tgatggcgac aaacggcgct tcggcccgcg ggctcagcgc
       61 atggagcgaa cgcgcgaaca gttccttgcc ggtaccgctc tcgccctcga tcaggaccgt
      121 ggcgtcggtg gccgctgcac gctgcagcgc agaaaagact ttccgcaacg acacgtcgtc
      181 gccgacgagc tgcggcgcgc cgcggcgcac cgccagctcc tctttcatca ggagattttc
      241 gttgaccagc cgccgctgtt cgagcgcgcg gttgacgagc agcagcaggt gatcggggtc
      301 gacaggcttc gccagaaagt cgagcgcacc ttccttcatc gcggtgaccg catcttcgat
      361 gctgccgtag gcggtcatca cgatgaccgg cacgtcgggg tcgatctctt tggacgcccg
      421 cagcacgccg aagccgtcgc cttcaggcag gcgcagatcc gacaagacga gggcggcctg
      481 cgaggtctgc agaatccgca tcgcttcggg ctgatcgcgc gcctccatga cgacgtgccc
      541 atggcgctcg agcgcgtgcc gcagcatcgt gcggagcgag tctttgtcct cgacgatgag
      601 aagctgggcg ggagcggaca cggcgcccag tctagcatca ccgcgcctcg cgccaggtca
      661 tcacggtgac cctgctcatg atcggcacgc ccgcaacgtc cctcacgacg tccgccgaca
      721 gcgtcgcctc gatcgcgcgc catgcgccgc gcgtgccgaa ggcttcggcg cgaacgagga
      781 tgacgccatt cgaatcacgc gaggggtcgc cgtcggtctc gtcgggatcg tcggcgaccc
      841 atgcgacgac atagggatcg ggtccgcccg gggcgcccga gatgaggcgc gcaatggacg
      901 catgcgcgta caagctccac acgggccggt tcggcccggc tggataaaac gcatcgctcg
      961 cggtctgccg atcgctggtg agccgcgcga ggtcgagcga cgaaccgtcc gccaggctcg
     1021 gcatggcgcg gccgtcgttg aagtcggccg acgcggatga catggaagga accggttgcc
     1081 agcccggcag ccgacgaaga tctgcgatca gccgctcgat cccggccgcc gcggcgtaac
     1141 tcccggatgc ggcggactgc tggtggcggc cgacgcggct ttcggtgacg acgacgaaca
     1201 cgagcgacgc ggcgagagcg gcgaggagcg acgtgatcat gacggcgatg agcagcgcgg
     1261 ctccccgatc ggcccgcttc ggatgcatca gcgccccgcc atgttgggcg gcgcgacatc
     1321 aatcgtcgtc tcgagatcgc gcaccgaacc gatcggagac tcgttctgca gccgcagcct
     1381 gacccggact cgccggatcc gcaacagatc cgcgtcgaac cggttcggcg cctcgccgga
     1441 aaccggaccg tcgagaagct gcgcgatcgg cagaggctgc agcgccggcc cgccctgatc
     1501 ggcgagatag cccacctcca tcgccgccac gcgatcgatg agtggcacat cgctccgatc
     1561 gccgtcgtag accatcagac gcccggtcgc cgcatcgagg taatagttcc ggaccgtgac
     1621 gatcgccacg cgtgcacccg ctgcgtaggg gcggctgagc ggcgccgcgg gcgtgaggag
     1681 ggcgcgggca gcatccacgg cggcgaccgt cagcaactcg tgggggccac cctcgacgga
     1741 cgggtcgtaa atgaccgccc gatcgccggg cacaaagtcg cacgcggtcg ctggcacgca
     1801 gcccggagtg ctgtcatcaa tcgcaagcgg cgaggtggcg gcggccatgc cgctctccag
     1861 cgacgtctgc gcgcgcgtgt cgggcacgta gacgatcgag atccggtcgc ttgctgccgt
     1921 gagttcaagg tccgcgcgca tcagtccgac cctggccggg agcacgggcg ggaaattgcg
     1981 aatcaacggc ccgcgcccgt tgccgcgcga ggggcccgcg cctgccatgg acaggtcgtg
     2041 gcgaagggcc tcggccacga cgcgcagccg ctgctgctgg tccgccgtg
//
LOCUS       DASSYW010001134         2569 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_509903, whole genome shotgun sequence.
ACCESSION   DASSYW010001134 DASSYW010000000
VERSION     DASSYW010001134.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2569)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2569)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2569
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_509903"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1602)
                     /locus_tag="VFN38_17885"
     CDS             complement(<1..1602)
                     /locus_tag="VFN38_17885"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acyl-AMP ligase"
                     /protein_id="HET9013702.1"
                     /translation="MSRPELLRDDARAAGVRTLVDLLEYRAERQPADVVFRFINSDGR
                     EEEVLTFATLRRRARAIATHLAEHVVPGDRVVLLVPPGLEYVASFFGCLYAGVVAVPA
                     YPPNPRRADPRVARIVADCGSRVALVNNAFMARLDGWLALTPELSALTWLDAGPLGDG
                     DASAWRAPDVTGASLAMLQYTSGSTGDPRGVMLAHSNLLHNSAVIHRVSEHRPLDNGV
                     FWLPQFHDMGLIGGILQPIYAGLSAALMAPATFLQRPLRWLEAMSRYGATTSGAPNFA
                     YDLCVERIGETERATLDLSAWRTSFNGAEPIRADTIARFSQAFAASGLRRDVILPCYG
                     LAEGTLLVSGGPAERAPMIVAADRRALESGELRAPDERGSSPLALVASGEPVAEQEVA
                     IVDPDTGLRSGDGQVGEIWVAGASVAAGYWGRPDATAAAFQARLAGSDRLFLRTGDLG
                     VLVEGQLVVTGRLKDLVIIDGRNYYPHDIELAAERSHSSLRAGFTAAFGVPVEDRERL
                     VLVAEVVRQHKPEADRSVLQAIRTEL"
     gene            complement(1599..>2569)
                     /locus_tag="VFN38_17890"
     CDS             complement(1599..>2569)
                     /locus_tag="VFN38_17890"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HET9013703.1"
                     /translation="GHTVRALVRPETPRDVRDPRIEHFEADLLDDRSVRESRAWEGAT
                     HVFHLAGVTRGRTLAHFRGGNVFPTANVLAALAARPGKPPRIVLVSSQAAAGPAADAE
                     TPMRETDRPVPVEAYGRSKLQAEQAVARYRDDLPITIVRPAAVYGPRDRDFLAAFKQA
                     SRRVALHAVPRDHAFSVVHVTDLVDALIRAAERPAAAGRTYFVADETPLTWGRLYDEV
                     AAVAGSRPIQLQVPRTAVRMAAHAGDLLSTLTGRPTLLNRNKAALARPRWWLCDASRA
                     REELDWKPTVPLQDGLRDTYNWYVEAGWLRPPKPDPNERAMEEPKA"
BASE COUNT          366 a          928 c          950 g          325 t
ORIGIN      
        1 cagctccgtg cgaatcgcct ggaggaccga gcggtccgcc tccggcttgt gctggcggac
       61 cacctccgcc acgagcacca gccgctcgcg atcttccacc ggcacgccga acgccgccgt
      121 gaagcccgcg cgcaggctgg aatgactgcg ctcggcggcg agctcgatgt cgtgcgggta
      181 gtagttgcgg ccatcgatga tgacgagatc cttcagccgt cccgtgacga cgagctggcc
      241 ctccacgagc acgccgagat cgcccgtgcg caggaagagc cggtccgaac ccgcgagccg
      301 cgcctggaac gccgcggcgg tcgcatccgg ccgaccccaa tagcccgccg ccacgctcgc
      361 tcccgcgacc cagatctcgc ccacctggcc gtcgccggag cggaggcccg tgtccggatc
      421 cacgatcgct acctcctgct cggccacggg ctcgcccgag gcgacgagcg cgagggggct
      481 cgatccgcgt tcgtccggtg cgcgcagctc gcccgactcc agcgctctgc ggtcggcggc
      541 gacgatcatc ggcgcgcgct cggccggccc gccggagacg agcagcgtgc cttcggccag
      601 cccgtagcag gggaggatca cgtcgcgccg caggccgctc gcggcgaacg cctgcgagaa
      661 gcgcgcgatc gtgtcggcgc gaatcggctc ggcgccgttg aacgaggtgc gccacgccga
      721 gaggtccagc gtcgcgcgct cggtctcgcc gatgcgctcg acgcagaggt cgtaggcgaa
      781 gttgggcgcg ccgctcgtcg tcgcgccgta gcgcgacatc gcctccagcc agcgcagcgg
      841 ccgctggagg aaggtcgccg gcgccatgag cgccgccgac aggccggcgt agatcggctg
      901 caggatcccg ccgatgagtc ccatgtcgtg gaactgcggc agccagaaga cgccgttgtc
      961 gagcggccgg tgctcggaca cgcgatggat gacggccgag ttgtgcagca ggttcgagtg
     1021 cgcgagcatg acgccgcgcg ggtcgccggt ggagcccgac gtgtactgaa gcatcgcgag
     1081 cgaggcgccc gtcacgtccg gggcgcgcca cgcggacgcg tcgccgtcgc cgaggggacc
     1141 ggcgtcgagc caggtgaggg cgctgagctc gggcgtgagg gcgagccatc cgtccaggcg
     1201 cgccatgaac gcgttgttga ccagcgccac gcgcgagccg cagtcggcca cgatgcgcgc
     1261 cacgcgcgga tcggcgcggc gcggattggg gggatacgcc ggcacggcga cgacgccggc
     1321 gtacaggcac ccgaagaacg acgcgacgta ctcgaggccg ggaggcacga gcagcaccac
     1381 ccggtcgccg ggcacgacgt gctcggcgag gtgcgtcgcg atggcgcgcg cacgccggcg
     1441 cagcgtggcg aaggtgagca cctcttcctc gcggccgtcg ctgttgatga accggaacac
     1501 gacgtccgcc ggctggcgct cggcacggta ctcgaggagg tcgacgagcg tccggacgcc
     1561 agcggcgcga gcatcgtccc gcaacagctc aggtctgctc acgccttcgg ttcctccatc
     1621 gcacgctcgt tgggatcggg cttcggcgga cggagccacc ccgcttcgac gtaccaatta
     1681 tatgtgtcgc gcagcccatc ctgcagggga accgtgggct tccagtcgag ctcttcgcgc
     1741 gcacgtgacg catcgcacaa ccaccatcgc ggacgggcga gcgccgcctt gttgcggttg
     1801 agcagggtcg ggcgccccgt gagcgtgctc aggaggtcgc ccgcgtgcgc cgccatgcgc
     1861 acggccgtgc ggggcacctg gagctggatg gggcgcgagc cggccacggc ggccacctcg
     1921 tcgtacaggc gcccccaggt cagcggggtc tcgtcggcca cgaagtaggt gcgccccgcc
     1981 gccgcgggcc gctcggcggc gcgaatgagg gcgtccacga ggtccgtcac gtgcacgacg
     2041 gagaaggcat gatcgcgcgg caccgcatgc agggccacgc gccggctcgc ctgcttgaag
     2101 gcggccagga agtcgcggtc ccggggaccg tacacggcgg cggggcgcac gatcgtgatc
     2161 ggaaggtcgt cgcggtagcg ggccaccgcc tgctccgcct gcagcttgct ccgcccgtac
     2221 gcctccaccg gcaccgggcg atcggtctcg cgcatcggcg tctcggcgtc cgcggccggt
     2281 cccgccgcgg cctgcgacga gacgagcacg atccgcggcg gcttgcccgg ccgcgccgcg
     2341 agggcggcga gcacgttcgc cgtcggaaag acgttgccgc cccggaagtg cgcgagcgtg
     2401 cgaccacgcg tcactcccgc caggtgaaag acgtgcgtcg ccccctccca cgcgcgcgat
     2461 tcgcgcacgg agcgatcgtc cagcaggtcg gcctcgaagt gctcgatgcg cgggtcgcgg
     2521 acgtctcgcg gggtctcggg ccggacgagc gcgcgcacgg tgtggcccc
//
LOCUS       DASSYW010001135         3501 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_215491, whole genome shotgun sequence.
ACCESSION   DASSYW010001135 DASSYW010000000
VERSION     DASSYW010001135.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3501)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3501)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3501
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_215491"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2563
                     /locus_tag="VFN38_17895"
     CDS             <1..2563
                     /locus_tag="VFN38_17895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013704.1"
                     /translation="VTVRSIGYRPRREVVQLGIGQRARLEFLMEQGAAELEAQTVLGE
                     RVKQVEVQRLSVSAPVMKEEIENLPLNSRGVMNLAGIAPGIKTYAPQSGRTLPSGGAA
                     PDLRFFNVYMDGVEMKSLYNGNIVGLGQTGSPLPQEALDQFRVYVNPYDAEYTRAGSY
                     VISAESRRGTNQWQGSAFGFFQNKSLIARNAFQTAVPEFGRRQLGFNVRGPLMKDRLF
                     LATSYELASTDFFLDVNPTSGPFTQYKGSFLAPNRNHTMFTRLTLVQSPSVTYDAMMS
                     ARFLKGEGNFGARVSQNGGISQDYKIYTGQLRQRYLAPGGSFVNEASLQLVNWNHNEL
                     PLVPGPQFTYPGILFGTAGFPLILKETHLRLVDRATWNVQAAGSHVMKAGVELSRIAA
                     SQSFPNNANGSFNFLTDTSTLPNTASIAVGFTDPNGLTDADASATGVTTGVYVNDEWR
                     MRENFTLSLGLRHDAEFNTMNNDYTVPWASDPVLQGIPELADYLNRGDRKNQLGNISP
                     RVSFSWDPVGKNRTFVRGGFGIIYDRVTSFIGFQERKNSTWRTYNFTNPGTTDPAVLR
                     ARVIAGQSGSPAPILIKHDMKTPHSRQMSLGIGHQFTSELGLNLDYVRQHMDNLYVQR
                     NPNYLDKTVTPNRRRLTPAYGDIVLWDDIGQSDYSAVMLQGTWQRNRTRMNLAYTLGW
                     YEGDFDTAALPNYAYPFLFSRQRTTGDERHRLVLSEVSPIPFGFMLSSIATFASPRPY
                     LTIDGRDINLDNITSDDYPGGTVSSTGIRTSRPANAWENWYRTVDLRLSRPLYERAGR
                     KVSASAEVFNLFNWNNNLSYGGTQYTAAGAPVASFGVPTGAYAARQAQVGMRLDW"
     gene            complement(2704..>3501)
                     /locus_tag="VFN38_17900"
     CDS             complement(2704..>3501)
                     /locus_tag="VFN38_17900"
                     /inference="COORDINATES: protein motif:HMM:NF045201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1343 domain-containing protein"
                     /protein_id="HET9013705.1"
                     /translation="RVYTYQWTLALAANAAKKPIIVLDRPDPIRADRYEGNILDPKFA
                     SLVGQYPVALRYGLTPGELMRYLAGTKLIDATVTVVPMKGYRRAMWFDETGIPRVNPS
                     PNLRTLDAELLYPGTVFFEGTTATEGRGTEAPFTLIGASWMTDNAAIAAELNALKLPG
                     VHFDTATRTIEAGYKFGGQTIPMVKVHVTNRNAVRPVELGVRMLRAIHARHPADLQWR
                     QRQIDRLAGTDKLRAAVERNRVGALLRAWDRDAATFKRRVKPYLLYR"
BASE COUNT          575 a         1281 c         1129 g          516 t
ORIGIN      
        1 ggtgaccgtg cgctccatcg gctaccggcc gcggcgcgag gtcgtgcagc tcggcatcgg
       61 ccagcgcgcg cggctcgagt tcctgatgga gcagggggcc gccgagctcg aggcgcaaac
      121 cgtgctgggc gagcgcgtga agcaggtgga ggtacagcgc ctctcggtct ccgcgccggt
      181 gatgaaggag gagatcgaga acctgccgct caactcgcgc ggcgtgatga acctcgccgg
      241 catcgcgccg ggcatcaaga cgtacgcgcc gcagtccggc cgcaccctgc cgtcgggcgg
      301 cgcggccccc gacctccggt tcttcaacgt ctacatggac ggcgtggaga tgaagagcct
      361 ctacaacggc aacatcgtcg gcctcggcca gacgggatcg ccgctgcccc aggaggcgct
      421 cgaccagttc cgcgtctacg tgaaccccta cgacgccgag tacacccgcg ccggctccta
      481 cgtgatcagc gccgagagcc ggcgcggcac caaccagtgg caggggtcgg cgttcggctt
      541 cttccagaac aagtcgctca tcgcgcgcaa cgccttccag accgccgtcc ccgagttcgg
      601 ccgccggcag ctcgggttca acgtccgcgg cccgctgatg aaggacaggc tgttcctcgc
      661 cacgagctac gagctggcgt ccaccgattt cttcctcgac gtgaacccca ccagcggccc
      721 cttcacgcag tacaaggggt cgttcctggc gccgaaccgg aaccacacga tgttcacgcg
      781 gctcaccctg gtgcagagcc ccagcgtgac gtacgacgcg atgatgtcgg cgcgcttcct
      841 gaagggtgag ggcaacttcg gcgcgcgcgt gtcgcagaac ggcggcatct cgcaggacta
      901 caagatctac accggccagc tgcggcagcg gtacctcgcg ccgggcggca gcttcgtcaa
      961 cgaggccagc ctgcagctcg tcaactggaa ccacaacgag ctgccgctgg tgcccggccc
     1021 gcagttcacc tatcccggca tcttgttcgg caccgccggc ttcccgctga tcctcaagga
     1081 gacgcacctc cgtctcgtgg accgcgcgac gtggaacgtg caggcggccg gctcgcacgt
     1141 gatgaaggcc ggggtggagc tgagccgcat cgcggcgagc cagagcttcc ccaacaacgc
     1201 gaacggctcg ttcaacttcc tcaccgatac ctccacgctg cccaacacgg cgtccatcgc
     1261 ggtgggcttc accgatccca acggcctcac cgacgccgac gccagcgcca ccggcgtgac
     1321 caccggcgtc tacgtgaacg acgaatggcg gatgcgggag aacttcaccc tctcgctggg
     1381 cctgcggcac gacgccgagt tcaacacgat gaacaacgac tacaccgtgc cgtgggcgag
     1441 cgacccggtg ctccagggga tccccgagct cgccgactat ctcaaccgcg gcgaccgcaa
     1501 gaaccagctc ggcaacatct cgccgcgcgt ctcgttctcg tgggatccgg tggggaagaa
     1561 ccggaccttc gtgcgcggcg gcttcggcat catctacgac cgcgtcacga gcttcatcgg
     1621 cttccaggag cggaagaact ccacctggcg cacgtacaac ttcaccaacc ccggcaccac
     1681 cgatcccgcc gtgctgcggg cgcgcgtgat cgccggccag tcgggctccc cggcgccgat
     1741 cctgatcaag cacgacatga agacgccgca cagccggcag atgtcgctcg gcatcggcca
     1801 ccagttcacc agcgagctgg ggttgaacct ggactacgtc cggcagcaca tggacaacct
     1861 gtacgtgcag cgcaacccga actacctcga caagaccgtc acgcccaacc ggcgccggct
     1921 caccccggcg tacggtgaca tcgtgctgtg ggacgacatc ggccagtccg actactccgc
     1981 ggtgatgctg caggggacat ggcagcggaa ccggacgcgc atgaacctcg catacacgct
     2041 gggctggtac gagggcgact tcgataccgc cgcgctgccg aactacgcgt accccttcct
     2101 gttcagccgc cagcgcacga cgggcgacga gcggcaccgg ctcgtgctgt cggaggtgag
     2161 cccgatcccg ttcgggttca tgctgtcgtc catcgccacc ttcgccagcc cgcggcccta
     2221 cctcacgatc gacgggcgcg acatcaacct cgacaacatc acgagcgacg actaccccgg
     2281 cggcacggtg agctccaccg gcatccgtac cagccggccg gcgaacgcct gggagaactg
     2341 gtaccgcacg gtggacctcc ggctgtcgcg gccgctgtac gagcgggccg gacggaaggt
     2401 gagcgcgtcc gccgaggtgt tcaacctctt caactggaac aacaacctgt cgtacggcgg
     2461 cacccagtac accgcggccg gcgccccggt ggcgtcgttc ggcgtgccca ccggggccta
     2521 cgcggcgcgc caggcgcagg tggggatgcg gctggactgg tgacggcgcc ctgacggccc
     2581 gccgctccgc ggccggccgt ctccgctcca ccgacggtcg caacgcacga agggtctgct
     2641 tcgccgaggc gagcagaccc ttcgtcgcgt ccgacggtcg agccgtcgcg gcgcctcagc
     2701 cggtcaccgg tacagcaggt acggcttcac ccgccgcttg aaggtggccg catcgcggtc
     2761 ccacgcccgc agcagcgccc ccacccggtt ccgctccacc gccgcacgca gcttgtccgt
     2821 gcccgccagc cggtcgatct ggcgctggcg ccactggagg tcggcggggt gccgggcgtg
     2881 gatcgcgcgc agcatccgca cccccagctc cacggggcgc acggcgttcc ggttggtgac
     2941 gtgcaccttc accatcggga tcgtctggcc gccgaacttg tagcccgcct cgatggtgcg
     3001 cgtcgccgtg tcgaagtgca ccccgggcag cttcagcgcg tttagctccg cggcgatcgc
     3061 cgcgttgtcg gtcatccacg acgcgccgat cagcgtgaac ggcgcctcgg tgccgcgccc
     3121 ctcggtggcc gtcgttccct cgaagaacac cgtgcccgga tagagcagct cggcgtccag
     3181 cgtgcgcagg ttcggcgacg ggttcacgcg ggggatcccg gtctcgtcga accacatcgc
     3241 ccgccggtag cccttcatcg gcacgacggt caccgtcgcg tcgatcagct tcgtcccggc
     3301 caggtagcgc atcagctcac ccggcgtgag cccgtagcgc agcgccacgg ggtactgccc
     3361 caccagcgag gcgaacttcg gatcgaggat gttcccctcg taccggtcgg cgcggatcgg
     3421 gtcggggcga tccagcacga tgatcggctt cttcgcggcg ttcgcggcga gggcgagcgt
     3481 ccactgatag gtatacaccc g
//
LOCUS       DASSYW010001136         2214 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_977504, whole genome shotgun sequence.
ACCESSION   DASSYW010001136 DASSYW010000000
VERSION     DASSYW010001136.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2214)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2214)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2214
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_977504"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..445
                     /locus_tag="VFN38_17905"
     CDS             <1..445
                     /locus_tag="VFN38_17905"
                     /inference="COORDINATES: protein motif:HMM:NF012573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013706.1"
                     /translation="GVSVLGLGTQINIANFDPTMDRLVINGLAGDDVIEASGLAAGGI
                     LLTADGGDGSDVLIGSDGNDVLLGGAGDDVLLGGLGIDVLDGGDGDDIEIQLVADEPV
                     KLVGDSASFEWLAAHDSQIDGIALMDASAMTVAGMTHYAQDGLLV"
     gene            674..1648
                     /locus_tag="VFN38_17910"
     CDS             674..1648
                     /locus_tag="VFN38_17910"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HET9013707.1"
                     /translation="MELRTLRYFVVLAEELHFGRAAQRLAITQPPLSLAIRGLEDELG
                     IVLLARTRRRVALTHAGSTFLEQARGILARTAEAVQLAQAADRGDVGRLTIGFMSASI
                     FTLLPAVLREFAARHPGVRLDLRELTLPQQIAALRSGNLDAGFVRPPVTDADLTATPL
                     LEEPLRVALPAGHRLTASKRIRAAQLAGEAFVAFQRAPGLVLHDLVLGFCLQQGFAPR
                     VAQEASQTHAVVGLVSAGIGVALVPASAEAIRLRGVEFRPLAEKSPPVGTCLAWRRDD
                     TSPALRAFVATAQRIAARLTDGAPARKRRGGAPTSSAGTGRRAPRASG"
     gene            complement(1599..>2214)
                     /locus_tag="VFN38_17915"
     CDS             complement(1599..>2214)
                     /locus_tag="VFN38_17915"
                     /inference="COORDINATES: protein motif:HMM:NF024893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AsmA-like C-terminal region-containing protein"
                     /protein_id="HET9013708.1"
                     /translation="RLLGNVGGRAAMEGSANGTFDLAAAGATVHQMKRGLGGSVALDV
                     RNGALVGIDLADLIGTASGFLQSRGRQTGALDENKRTPFSQLSASVRIKDGVATNDDL
                     RAKSPQLDIAGSGRMDVVSTELDYALRAQVLPDPANERGALRSLVGLTVPVKITGPIE
                     KPSYTVDWAPIAAEVLLKRATGRAGTPGVNQMLEGLGDLFRRKK"
BASE COUNT          295 a          804 c          776 g          339 t
ORIGIN      
        1 cggcgtttcg gtgctgggtc tggggacgca gatcaacatc gcgaacttcg acccgacgat
       61 ggaccggctg gtgatcaacg gcctcgccgg cgacgacgtc atcgaggcgt ccggcctggc
      121 ggccggcggc atcctgctca cggcagacgg cggtgacggc agcgacgtgc tgatcggcag
      181 cgacggcaac gatgtgttgc tcggcggtgc cggcgacgac gtgctgctcg gcgggctcgg
      241 catcgacgtc ctcgacggcg gcgacggcga cgacatcgag atccagctgg tcgctgacga
      301 gcctgtcaaa ctggttggcg acagcgcttc cttcgagtgg ctggccgcgc acgacagcca
      361 gatcgacggc atcgcgctga tggacgcgag cgccatgacg gtagcgggca tgacgcacta
      421 cgcgcaggac ggcctgttgg tgtaagccgg cacgcgggcg gcgtcgaacg acccgcccgc
      481 ggctccgcca aggcaggcgc tttcgagcgc gctgcggaca acctgcgcac ccggacgtcc
      541 cgcgaagtgc gcgacgaccg gtcccggcgg tcgcctcccg catcctcggg cgcagctccg
      601 ctgcgtcatc gagcctggcg ggcaccaagg tccgatatat atttcgtccg ccactgattt
      661 gcggcggata tcaatggaac tgcggaccct gcgttatttc gtcgtgctcg ccgaagaact
      721 gcatttcggc cgggcggcgc agcggctggc gatcacgcag ccgccgctgt cgctcgcgat
      781 tcgcgggctc gaggacgagc tcggaatcgt ccttctcgcc cgcacgcgcc ggcgtgtcgc
      841 cctgacccac gccggcagca ccttcctcga acaggcgcgc ggaatcctgg cgcggacagc
      901 cgaggccgtt cagctcgcgc aggccgccga ccgcggcgac gtcggccggc tgacgatcgg
      961 cttcatgtcg gccagcatct tcacgctcct gccggcggtg ctgcgcgagt tcgcggcccg
     1021 ccacccgggc gtgcggctcg acctgcggga actgacgctg ccgcagcaga tcgccgccct
     1081 gcgttcgggc aatctcgacg cgggcttcgt ccgcccgccg gtgaccgacg ccgacctgac
     1141 ggcgacgccg ctgctcgagg aaccgctgcg ggtcgcgctg ccggcgggtc accgactgac
     1201 ggcctcgaag cgcatacgcg cagcacagct cgccggggaa gcgttcgtgg cgttccagcg
     1261 cgcgccgggc ctcgtgctcc acgatctcgt gctcggcttc tgcctgcagc agggattcgc
     1321 gccacgcgtg gcgcaggagg cgagccagac gcacgccgtc gtcggactcg tgtcggccgg
     1381 catcggcgtg gcgctggtcc cggcttcggc cgaagcgatc cgcctgcgcg gcgtcgaatt
     1441 ccggccgctc gccgagaagt ccccgccggt cggcacctgc ctcgcgtggc gacgcgacga
     1501 cacctcgccg gcgctgcgcg cgttcgtggc gaccgcgcag cgcatcgcgg cgcggctcac
     1561 cgatggcgcg cccgcgcgca aacgccgcgg cggcgcccct acttcttccg ccggaacagg
     1621 tcgccgagcc cctcgagcat ctggttgact ccgggcgtgc cggcacgacc ggtggcgcgc
     1681 ttcagcagta cctcggccgc gatcggcgcc cagtcgaccg tgtacgacgg cttctcgatc
     1741 gggccggtga tcttcacggg caccgtgagc cccacgagcg agcggagcgc gccacgctcg
     1801 ttcgccgggt ccggcagcac ctgtgcccgc agcgcatagt cgagttcggt gctgacgacg
     1861 tccatccgtc cgctgcccgc gatgtcgagc tgcggcgact tcgctctcag gtcgtcgttg
     1921 gtcgcgacgc cgtccttgat ccgcacgctc gccgaaagct gcgagaacgg cgtgcgcttg
     1981 ttctcgtcga gcgcgccggt ctgccggccg cgcgactgca ggaagcccga cgccgtgccg
     2041 atcaggtcgg cgaggtcgat gccgaccagc gcgccgttgc gcacgtcgag ggcgacgctg
     2101 cctcccagtc cccgcttcat ttggtgaacc gtggctccgg cggcggcaag atcgaaggtt
     2161 ccgttcgcgc tgccctccat ggctgcgcgg ccgcccacgt tcccgaggag gcgt
//
LOCUS       DASSYW010001137         4388 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1247071, whole genome shotgun sequence.
ACCESSION   DASSYW010001137 DASSYW010000000
VERSION     DASSYW010001137.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4388)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4388)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4388
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1247071"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..932
                     /locus_tag="VFN38_17920"
     CDS             <1..932
                     /locus_tag="VFN38_17920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013709.1"
                     /translation="HRDLVGFNAYPAFRYLHMTALDRAATMMTLLPRVGRLLVFPTQL
                     SGDYSPTDVAIARGGELLLLPGFFMCLGVVLLAVALRRRSPVASFGLCWMILAYLPVS
                     NLLAPTGFLIAERTLFFPSVGVVLVAGAIVARVLADGLPRPRWMAGGVVAALLVLGLA
                     GSISRQRVWKNNRVFFDALVQDAPNSYRAHFLRARVVRGENRVPEMIAEYRHAMRLFP
                     YDAKMTLAMAADYHDAGACSLASAIFRWSYVLEPTAAEGRYGYVECLMRERRWAEART
                     EALSAMAVMSGRDIRPLRVAVARADSALARRSP"
     gene            1166..1597
                     /locus_tag="VFN38_17925"
     CDS             1166..1597
                     /locus_tag="VFN38_17925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HET9013710.1"
                     /translation="MTRTRKGFTLIELLIVVVIIGILAAIAIPKFANTKTKAYQTAMK
                     SDLRNLVTAEEAFFSDSGKYKAPYVATGIQGDTVLKFRPSTSVSDPKIVTGAGFWTAT
                     VTHSQIPAPFTCGIGVNTTNPLPGMTAAGDGEPVCAAVAQP"
     gene            1762..2976
                     /locus_tag="VFN38_17930"
     CDS             1762..2976
                     /locus_tag="VFN38_17930"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HET9013711.1"
                     /translation="MPRPGPLPSLRTELLVNFAILAVAALVFAVASVVLLYDTLEPAR
                     AVLYISLLIAADVAVVVAFGAYQLRRLVVQPLRRTAAAAEAIAAGDLGRRVEAHASRE
                     LAQLATSVNRMTERLLHEQAQLVRAEKLASVGRLAAGIAHEIGNPLGAISGYAHLLRV
                     GAGTDARALDAVAGLERETARIDRIVRGLLDYARPRRLSPTSIDVNETIRHVAALVDE
                     QGHLRHVALVLTLSPHAPVVAGDRHELEQVFVNLLLNAADAAGQSGVVAVSSTVMSRA
                     VIEAGFERRATDPAAIGARHPPSPRVSAWLGRERAADSFVKVIVADSGVGVPDANAER
                     IFDPFFTTKEPGKGTGLGLAIVARSVENLGGIVWVERAREGGAALHLFLPLATPGVRT
                     GALVDAPEAVRA"
     gene            2973..4328
                     /locus_tag="VFN38_17935"
     CDS             2973..4328
                     /locus_tag="VFN38_17935"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HET9013712.1"
                     /translation="MNILVVDDELGLRHTLSLILQAEGHVVRAASDGRSALELLAAAP
                     ADLILCDVRMPEMDGLAFLDRYTAGGGGALVIMMSAYGDDEAALEAIRRGAYDFIAKP
                     FRADQVLLVLRKAIEREQLQRTVAQLHEELTALRAPTGVVGRSPQLAAALALAERVAR
                     HPSTVLVTGESGSGKELVARYIHRASPRAAAPFVAVNCGAIPEALLESELFGHAKGAF
                     TGATSERDGLFAEADGGTLFLDELGELPMPLQVKLLRALQEGEVRRVGDNASRTVDVR
                     VVAATARDLEADVAEGKFRADLYYRVNVVRIHLPALRERTEDVPELVHHFIARFNRRL
                     GLQVEGATAAAMRALMEYPWPGNVRELENVVERAMVLCDGPRLDVAQLPALAAPPAAG
                     NGASGSLDLSVKRRTDALERTLITEALERTRGNRTRAAKLLDLSHRALLYKIREYGIG
                     E"
BASE COUNT          597 a         1623 c         1549 g          619 t
ORIGIN      
        1 tgcaccgcga cctcgtgggg ttcaacgcgt accccgcctt ccgctacctg cacatgaccg
       61 cgctcgaccg cgcggccacg atgatgacgc tgctgccgcg cgtcggacgc ctgctggtgt
      121 tccccacgca gctcagcggc gactactcgc ccaccgacgt cgccatcgcg cgcgggggcg
      181 agctcctgct gctccccggc ttcttcatgt gcctgggcgt ggtgctgctc gcggtcgcgc
      241 tgcggcgccg gtcgccggtg gcgagcttcg ggctctgctg gatgatcctc gcctacctcc
      301 cggtgagcaa cctgctcgcg cccaccggct tcctcatcgc ggagcgcacc ctcttcttcc
      361 cgagcgtcgg cgtcgtgctg gtggccggcg ccatcgtcgc gcgcgtgctg gcggacggcc
      421 tccccaggcc gcggtggatg gcgggcggcg tcgtcgccgc cctcctcgtg ctggggctgg
      481 ccggcagcat cagccgccag cgcgtctgga agaacaatcg cgtgttcttc gacgcgctcg
      541 tgcaggacgc gccgaacagc tatcgcgccc acttcctccg cgcgcgcgtg gtgcgcggcg
      601 agaaccgggt gcccgagatg atcgcggagt accggcacgc catgcgcctg ttcccgtacg
      661 acgcgaagat gacgctcgcg atggcggccg actaccacga cgccggcgcg tgctcgctgg
      721 ccagcgcgat cttccgctgg tcctacgtgc tggagcccac ggcggccgag ggacggtacg
      781 gctacgtgga gtgcctgatg cgcgagcgcc ggtgggcgga agcacgcacc gaagcgctct
      841 cggcgatggc tgtgatgtct gggcgggaca ttcgtcctct ccgtgtagcc gtcgcgcgcg
      901 cggacagtgc gctcgcgcga agatcaccct agaacaccgc aacgcgagcc ggcgtgttgc
      961 aaagtgccac ggatccggcg gaatactgca cgagcggacg gagaccaccg aagtggcgat
     1021 cggctaagtg attgacaggg caggagatgc gccgacatgc caacgtggtc cacctgttgc
     1081 taaacacggt accgtcagct ggacaaagat ggacccccac cgacgacgaa cgcagtcgtc
     1141 aaactcccct tccaagagaa aaaccatgac tcgcactcgc aagggcttta cgctcatcga
     1201 gctcctgatc gtggtcgtga tcatcggcat tcttgccgcc atcgcgatcc cgaagtttgc
     1261 caacacgaag accaaggcgt accagaccgc gatgaagtcg gatctgcgca acctggtgac
     1321 ggccgaggaa gcgttcttct cggattccgg taagtacaag gctccgtacg tcgccacggg
     1381 catccagggc gacacggtcc tcaagttccg cccctccacg agcgtcagcg acccgaagat
     1441 cgtgacgggc gccggcttct ggacggccac ggtgacgcac tcgcagatcc cggcgccgtt
     1501 cacctgcggc atcggcgtga acacgaccaa cccgctcccc ggcatgacgg ccgccggcga
     1561 cggtgagccg gtctgcgccg cggtcgcgca gccgtaacat ctgaccggct gccggccggc
     1621 agctcgaccg gcagactggc gatcgaagac ggcgcaccgg acctggtccg gtgcgccgtc
     1681 gtcgtttcgt ccggtgcgcc ggcgaaatga cctccgccag cgcgactcgt ccatctccca
     1741 gtgccgtccc tcgtcccacg catgccccgc cccggcccgc tcccctcgct ccgcacggag
     1801 ctgctcgtca acttcgccat tctcgccgtc gcggcgctgg tcttcgccgt cgcgagcgtg
     1861 gtgctgctgt acgatacgct cgagccggcg cgcgccgtgc tctacatcag cctcctcatc
     1921 gccgccgacg tcgcggtggt ggtggcgttc ggcgcgtacc agctccggcg cctcgtcgtg
     1981 cagccgctgc ggcgcaccgc cgccgcggcg gaggccatcg ccgcgggcga ccttggccgc
     2041 cgcgtcgagg cccacgcctc gcgcgagctc gcccagctcg cgacgagcgt gaatcgcatg
     2101 accgagcggc tcctgcacga gcaggcgcag ctcgtgcgcg ccgagaagct cgccagcgtc
     2161 ggccgcctcg ccgccggcat cgcccacgag atcggcaacc cgctcggcgc catcagcggc
     2221 tatgcccacc tgctgcgcgt gggggcgggc accgacgcgc gcgcgctcga cgcggtggcg
     2281 gggctggagc gcgagacggc gcgcatcgac cgcatcgtcc gcgggctgct cgactacgcg
     2341 cgcccccggc ggctgagccc cacctccatc gacgtcaacg agacgatccg gcacgtcgcg
     2401 gcgctcgtgg acgagcaggg gcacctgcgc cacgtggcgc tggtgctcac gctgtcgccc
     2461 cacgcgcccg tggtggccgg cgaccgccac gagctggagc aggtgttcgt caacctgctg
     2521 ctcaacgccg ccgacgccgc cggccagtcg ggggtggtcg ccgtgagcag caccgtcatg
     2581 tcgcgcgcgg tgatcgaggc gggcttcgag cggcgcgcca ccgaccccgc cgccatcggc
     2641 gcgcgacatc cgccgagccc gcgcgtgagc gcctggctgg ggcgcgagcg cgccgccgac
     2701 tcgttcgtga aggtcatcgt cgccgactcc ggggtcggcg tccccgacgc caacgcggag
     2761 cggatcttcg accccttctt caccaccaag gagccgggga aggggacggg gctcggcctg
     2821 gccatcgtcg cgcgcagcgt ggagaacctc ggcggcatcg tgtgggtgga gcgggcgcgc
     2881 gagggcggcg ccgcgctgca cctgttcctg cccctcgcca cgccgggcgt ccgcacgggc
     2941 gccctcgtgg acgcaccgga ggcggtgcgc gcatgaacat cctcgtcgtg gacgacgagc
     3001 tggggctccg gcacaccctc tcgctgatcc tccaggcgga ggggcacgtc gtgcgcgccg
     3061 cgagcgacgg ccgctccgcg ctcgagctgc tcgccgcggc gccggccgac ctgatcctgt
     3121 gcgacgtgcg catgccggag atggacggcc tcgccttcct cgaccgctac accgcgggcg
     3181 gcggcggcgc gctcgtgatc atgatgagcg cgtacggcga cgacgaggcc gcgctggagg
     3241 cgatccggcg cggcgcctac gacttcatcg ccaagccgtt ccgcgccgac caggtgctcc
     3301 tcgtgctgcg caaggcgatc gagcgcgagc agctccagcg cacggtggcc cagctgcacg
     3361 aggagctcac cgcgctgcgg gcccccacgg gcgtcgtcgg ccgcagcccg cagctcgccg
     3421 cggcgctcgc cctcgccgag cgggtggcgc gccacccctc cacggtgctc gtcaccggcg
     3481 agagcggcag cgggaaggag ctggtggcgc gctacatcca tcgcgccagc ccgcgcgccg
     3541 cggcgccgtt cgtcgccgtc aactgcgggg ccatccccga ggcgctgctg gagagtgagc
     3601 tgttcggcca cgccaagggg gcgttcaccg gggcgaccag cgagcgcgat gggctgttcg
     3661 ccgaggccga cggcggcacc ctcttcctgg acgagctcgg ggagctgccg atgccgctcc
     3721 aggtgaagct cctccgcgcc ctgcaggagg gcgaggtccg gcgggtgggc gacaacgcgt
     3781 cgcgcaccgt cgacgtccgc gtggtggcgg ccaccgcgcg cgacctggag gccgacgtgg
     3841 cggaggggaa gttccgcgcc gacctgtact accgcgtgaa cgtcgtgcgc atccacctgc
     3901 cggcgctgcg cgagcgcacg gaggacgtgc cggagctggt gcaccacttc atcgcccgct
     3961 tcaaccgccg cctcggcctc caggtggagg gggcgacggc ggccgcgatg cgcgcgctga
     4021 tggaataccc gtggcccggc aacgtgcgcg agctggagaa cgtcgtcgag cgcgcgatgg
     4081 tgctgtgcga cgggccgcgg ctggacgtcg cgcagctgcc ggcgctggcc gccccgccgg
     4141 ccgcggggaa cggggcgtcc gggtcgctcg acctctcggt gaagcgtcgc accgacgcgc
     4201 tggagcgcac cctcatcacc gaggcgctcg agcgcacgcg cggcaaccgc acgcgggccg
     4261 cgaagctgct cgacctctcg caccgcgcgc tgctctacaa gattcgcgag tacggcatcg
     4321 gcgagtagcg cggcggcgtg gtgcggcgcg cggcggtccg atgccgctcg ccggtggcca
     4381 tggggtga
//
LOCUS       DASSYW010001138         2378 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1055033, whole genome shotgun sequence.
ACCESSION   DASSYW010001138 DASSYW010000000
VERSION     DASSYW010001138.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2378)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2378)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2378
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1055033"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..994)
                     /locus_tag="VFN38_17940"
     CDS             complement(<1..994)
                     /locus_tag="VFN38_17940"
                     /inference="COORDINATES: protein motif:HMM:NF036516.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013713.1"
                     /translation="MFRAFPRRALSVLAATMLAAPLAAQGAPADSSLSAPVTDLRYEV
                     VADRAALALRRLRVTTTFAVSGASPVVMSLPAWTPGAYEISNFASRVVGFGASQSGAA
                     LRWDKLDFDTWRVRPAGAGRVTLTFEFLADTLDNAMAWTRPDFALFNGTNLFLYPEVG
                     TAEIPATVVVRTEPDFRVATSMTPAGAARTFRASSYHELVDMPVFVGRFDVDSATISG
                     KTVRYATYPMGSVAGSARSQAWDQLKRIIPAEALVFGEVPWDSYSLLQIADSSYGGYS
                     GLEHSSSHVDIVAPAFVGSDFQPSLYAHEIFHAWNVKRLRPAELVPYRYDRPQPT"
     gene            1128..2078
                     /locus_tag="VFN38_17945"
     CDS             1128..2078
                     /locus_tag="VFN38_17945"
                     /inference="COORDINATES: protein motif:HMM:NF025616.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4349 domain-containing protein"
                     /protein_id="HET9013714.1"
                     /translation="MTAALTLALLAAACNRTSDAPGADTAGAGGAAAAGDAAWPAGAP
                     KLMAQREEAMARRVRPAAPPVEAGVASAVAADSRAISLGSPISGDLSGAMLIRNGQAS
                     VEVKRVDDAVARLRQTAGQLGGFVANTAIVGGREEHRTATLELRVPSSQFDAAVAALS
                     ALGKVESVSATVQDVGEEYVDLAARAANARHMEARLVEMLARRTGKLSEALTVEQELR
                     RVREEIERYDARLKWLERRTALSSLEVTLREPMSVLDQRGPNPIAEAFAEAWRRAVGV
                     LAWAIASLGILVPLGLLFAGMLLLARRLLRPGGPAGVAGA"
     gene            2095..>2378
                     /locus_tag="VFN38_17950"
     CDS             2095..>2378
                     /locus_tag="VFN38_17950"
                     /inference="COORDINATES: protein motif:HMM:NF015148.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035673 - oligopeptide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OPT/YSL family transporter"
                     /protein_id="HET9013715.1"
                     /translation="MTIPTQHTTPGASFSPYVPATEAPREFSIGAIVLGVLLGLVFAA
                     SSIYLALKVSLTVSASIPIAVLSITIFRYISRAFGMRPATILQNNLVQTTG"
BASE COUNT          339 a          834 c          890 g          315 t
ORIGIN      
        1 gagtgggctg cgggcgatcg taccggtacg gcacgagctc ggcggggcgg agccgcttca
       61 cgttccaggc gtggaagatc tcgtgcgcgt acagcgacgg ctggaagtcg ctgccgacga
      121 acgcgggggc gacgatgtcg acgtgggagc tggagtgctc gagcccactg tagccgccgt
      181 agctggagtc ggcgatctgg agcagcgaat agctgtccca cggcacctcg ccgaacacga
      241 gcgcctcggc cgggatgata cgcttgagct ggtcccacgc ctgggagcgc gcgctgccgg
      301 cgacgctgcc catggggtag gtcgcgtagc gcaccgtctt gcccgagatc gtcgcgctgt
      361 cgacgtcgaa ccggcccacg aagaccggca tgtccacgag ctcgtgatag ctggatgcgc
      421 ggaaggtgcg cgcggcaccg gccggcgtca tgctcgtggc cacgcggaag tcgggctcgg
      481 tgcgaacgac gacggtggcg ggaatctcgg cagtgccaac ctcgggatac aggaagaggt
      541 tcgtgccgtt gaacaacgcg aagtcgggcc gcgtccaggc catcgcgttg tcgagcgtgt
      601 cggcgaggaa ctcgaaggtg agcgtcacgc ggccggcgcc ggcggggcgc acgcgccagg
      661 tgtcgaagtc gagcttgtcc cagcgcagcg cggcgcccga ctggctggcc ccgaagccga
      721 ccacccggct ggcgaagttg ctgatctcgt acgcgccggg cgtccacgcg gggagcgaca
      781 tcaccaccgg gctcgcgccg ctcacggcga aggtcgtggt cacgcgcagg cgccgcagcg
      841 ccagcgctgc ccggtcggcc accacctcgt agcgcaggtc ggtcaccgga gcggagaggc
      901 tggagtcggc gggcgccccc tgggcggcca gcggcgcggc cagcatggtg gcggcgagaa
      961 cggacagggc acgacggggg aaagcgcgga acatggcgtg gacgtgtgtg agtggcggtg
     1021 cgcggtgcgt ctcccgacag ggccgcgacg cgagcccgag ttcaacccat gatctacgac
     1081 gaggaacgcc catgcgaaag cgcatcgtat cagcccgtct ccggaccgtg accgcagccc
     1141 tcaccctcgc gctgctcgcc gcggcgtgca accgcacctc ggacgcgccg ggggcggaca
     1201 ccgccggcgc cggtggagcc gccgcggccg gcgacgccgc ctggccggcc ggcgcgccga
     1261 agctcatggc ccagcgcgag gaagcgatgg cgcgccgcgt tcgccccgcc gccccgcccg
     1321 tggaggccgg cgtggcgagc gccgtggccg ccgacagccg cgccatctcg ctcggcagtc
     1381 cgatctccgg ggatctctcc ggcgcaatgc tcatccgcaa cggccaggcg agcgtggagg
     1441 tgaagcgggt ggacgacgcc gtggccaggc tgcgacagac ggccgggcag ctcgggggct
     1501 tcgtcgccaa caccgccatc gtgggcgggc gggaggagca ccgcacggcc acgctcgagc
     1561 tccgcgtgcc cagctcgcag ttcgacgcgg cggtcgccgc gctgtcggcg ctgggcaagg
     1621 tggagtcggt gtcggccacg gtgcaggatg tgggcgagga gtacgtggac ctcgccgcgc
     1681 gcgccgccaa cgcgcggcac atggaggcgc gcctcgtgga gatgctcgcg cggcgcaccg
     1741 ggaagctgtc cgaggcgctc accgtggagc aggagctgcg ccgggtccgg gaggagatcg
     1801 agcgctacga cgcgcggctc aagtggctgg agcggcgcac cgccctcagc tccctggagg
     1861 tcacgctgcg cgagccgatg tcggtgctcg accagcgcgg gccgaacccg atcgccgagg
     1921 cgttcgccga ggcgtggcgg cgggcggtcg gcgtgctggc gtgggccatc gcctcgctcg
     1981 gcatcctcgt ccccctcggg ctcctgttcg ccgggatgct cctgctggcg cgccgcctcc
     2041 tgcggccggg aggtccggct ggcgtggccg gagcgtgagc ccccatattc gcgcatgacc
     2101 atacctaccc agcacaccac gccgggggcg tccttctccc cgtacgtccc cgccacggag
     2161 gcgccgaggg agttcagcat cggcgcgatc gtcctcggcg tcctgctcgg cctcgtcttc
     2221 gccgcctcga gcatctacct cgcgctcaag gtgagcctca ccgtcagcgc ctcgatcccc
     2281 atcgcggtgc tgtcgatcac catcttccgc tacatctcgc gcgcgttcgg gatgcggccg
     2341 gcgacgatcc tccagaacaa cctcgtccag accaccgg
//
LOCUS       DASSYW010001139         2458 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_406384, whole genome shotgun sequence.
ACCESSION   DASSYW010001139 DASSYW010000000
VERSION     DASSYW010001139.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2458)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2458)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2458
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_406384"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..865
                     /gene="thrB"
                     /locus_tag="VFN38_17955"
     CDS             <1..865
                     /gene="thrB"
                     /locus_tag="VFN38_17955"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: protein motif:HMM:TIGR00191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004413 - homoserine kinase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HET9013716.1"
                     /translation="PGSISNLGPSFDAMSVAVQLYLRLRVVRVDPAAPDTVRWTFIGG
                     GPTGENRIASAYRLARARIGTPAPGLHVEVQSDIPQTAGLGSSAAAAVAGLKLYEAVT
                     APRSNMEWLALASELEGHPDNAAAAILGGLAVSCECGDGRIVARTSRWPDAVRFVVAT
                     PHNGLHTSEARGVLPRQVSLEDAIFNLQRSLLFVRALESGRYEDLREAMRDRWHQPAR
                     APLVPGLAEAMAFEDEAVLGVCLSGAGPSILALATDGAARAAQLLTDLYTRLGLKCTI
                     RTLSAHNPADS"
     gene            862..2112
                     /gene="thrC"
                     /locus_tag="VFN38_17960"
     CDS             862..2112
                     /gene="thrC"
                     /locus_tag="VFN38_17960"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004795 - threonine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HET9013717.1"
                     /translation="MKHVMNFSLRCHLCQTPFPATAVWVCDRCLGPLEVTYDYAAIAQ
                     LVSRDVIEGRAKNLWRYRELLPIEGEPRTGLHSGFTPLVRANRLAARLGVRELFVKDD
                     SVNHPTCSYKDRVVSIAATRAVELGFTVFSCASTGNLAGSVASHGARLGLSVYVFIPD
                     NLEAGKVAGASVYRPRIVAVRGNYDDVNRLCTQVADKYGWGFANINLRAYYAEGAKTY
                     GFEIAEQLGWKFPQHVVSPVAGGTLLPRILKGFEELKTVGLVDGAVPTIHAAQAAGCA
                     PVVRALDDGLEYPEPVKPDTIAKSIAIGNPADGFQVLRSVRSTGGSGAMVSDADVVEG
                     IQLLAETEGIFTEPAGGVTVAATRQLIERGAIPRDESIVICITGNGYKTIEVLDGHGV
                     TPIRIGRSLADFEASEAAPAVAGA"
     gene            2118..>2458
                     /locus_tag="VFN38_17965"
     CDS             2118..>2458
                     /locus_tag="VFN38_17965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013718.1"
                     /translation="MSSYRAVFRCAAGCPGEHSIWQPIYHCPTCGGLLQVAHDLEALR
                     HRSPVAWMRLFDDRYKRTTWPYGSGVWGKKEWICPEIRDENVVSMDEGGTNIFWAERY
                     GRTIGVEDLWV"
BASE COUNT          365 a          848 c          865 g          380 t
ORIGIN      
        1 ccccggatcg atcagcaacc tggggccgtc gttcgacgcg atgtccgtcg cggtgcagct
       61 ctacctccgt ctgcgcgtcg tccgcgtcga tcccgcggcg ccggataccg tgcgctggac
      121 gttcatcggc ggcggcccga ccggtgagaa ccggatcgcg tccgcctacc gtctcgcgcg
      181 cgcgcgcatc ggcacgccgg caccggggct gcacgtcgag gtgcagagcg acatcccgca
      241 gaccgcgggg ctgggcagca gcgccgcggc agccgtggcc gggttgaagc tgtacgaggc
      301 ggtcacggcg ccgcgaagca acatggagtg gctggcgctg gcgtcggagc tcgagggaca
      361 tcccgacaac gcggccgcgg ccatcctcgg cggcctggcg gtcagctgtg agtgcggcga
      421 cggccgcatc gtcgcgcgga cgtcgcggtg gccggacgcc gtgcggttcg tggtcgcaac
      481 gccgcacaac ggtctgcaca cgtccgaggc gcgcggcgtg ctgccgcggc aggtctcgct
      541 cgaggacgcc atcttcaacc tgcagcgctc gctgctcttc gtgcgcgcgc tcgagtctgg
      601 acgctacgag gatctgcgcg aggcgatgcg cgaccgctgg catcagccgg cgcgcgcgcc
      661 cctcgtgccc ggcctggcgg aagcgatggc gttcgaggac gaggcggtgc tcggcgtgtg
      721 cctgagcggc gccggcccgt cgattctcgc gctcgcgacc gacggcgcgg cgcgcgccgc
      781 gcaactgctg accgatctct acacccgtct gggcctgaaa tgcacgatcc ggacgttgtc
      841 ggcccacaac ccggcggact catgaaacac gttatgaact tttcgcttcg ctgccatctc
      901 tgtcagacgc cgtttcccgc caccgccgtg tgggtgtgcg atcgctgtct cggtccgctc
      961 gaggtcacct acgactacgc cgccatcgca cagctcgtct cgcgcgacgt gatcgaagga
     1021 cgggcgaaga acctctggcg ctatcgcgag ctcctgccga tcgaaggcga gccgcgcacc
     1081 ggcctccact ccggcttcac cccgctcgtg cgggcgaacc ggctggcggc gcgcctcggc
     1141 gtccgcgagc tgttcgtcaa ggacgactcg gtcaaccatc cgacgtgctc ctacaaggac
     1201 cgcgtcgtgt cgatcgcggc gacgcgcgcg gtagagctcg gcttcacggt gttctcgtgc
     1261 gcgtcgaccg gcaatctcgc cggcagcgtc gcgtcgcacg gcgccaggct cggtctctcg
     1321 gtctacgtct tcatccccga caacctcgag gccggcaagg tcgcaggcgc gagcgtttac
     1381 cgcccgcgca tcgttgccgt gcgcggcaac tacgacgatg tgaaccggct gtgtacccag
     1441 gtggcggaca agtacgggtg ggggttcgcg aacatcaacc tgcgcgccta ctacgcggag
     1501 ggcgccaaga cctacggctt cgagatcgcc gagcagctcg gatggaagtt tccgcagcac
     1561 gtcgtgtcgc cggtcgcggg gggaacgctc ctgccgcgca tcctcaaggg gttcgaggag
     1621 ctgaagaccg tcggtctcgt cgacggtgcg gtgccgacga tccacgcggc gcaggccgcc
     1681 gggtgcgcgc cggtcgtgcg cgcgctcgac gacggcctcg agtatcccga gcccgtgaag
     1741 ccggacacga tcgccaagtc gatcgcgatc ggcaacccgg cggatggatt ccaggtgctg
     1801 cgctcggtgc ggtcgaccgg cggcagcggc gcgatggtga gcgacgccga cgtcgtcgaa
     1861 ggcatccagc tgctcgcgga gaccgaaggc atcttcaccg agccggccgg cggcgtcacc
     1921 gtcgccgcga cgcgtcagct gatcgagcgc ggcgccatcc cgcgcgacga atcgatcgtg
     1981 atctgcatca ccggcaacgg ctacaagacg atcgaagtcc tcgacggaca tggcgtgacg
     2041 ccgatccgca tcggccgcag ccttgccgac ttcgaggcga gcgaggccgc gcccgcggtg
     2101 gcgggcgcgt gacacccatg agtagctacc gcgccgtttt ccgctgtgcc gccgggtgtc
     2161 ccggtgagca ctcgatctgg cagccgatct atcactgccc gacgtgcggc ggcctgctgc
     2221 aggtcgcgca cgacctcgag gcgctgcgcc accgcagccc ggtggcgtgg atgcgcctct
     2281 tcgacgaccg ctacaagcgg acgacgtggc cgtacggatc gggcgtgtgg ggcaagaagg
     2341 agtggatctg ccctgagata cgcgacgaga acgtcgtctc gatggacgag ggcggtacca
     2401 acatcttctg ggcggagcgc tacggcagaa cgattggcgt cgaggatctc tgggtgaa
//
LOCUS       DASSYW010001140         4109 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_786662, whole genome shotgun sequence.
ACCESSION   DASSYW010001140 DASSYW010000000
VERSION     DASSYW010001140.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4109)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4109)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4109
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_786662"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1555
                     /locus_tag="VFN38_17970"
     CDS             <1..1555
                     /locus_tag="VFN38_17970"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HET9013719.1"
                     /translation="GIMLALPTLADGQASGAGGGSAARPPSELARPSTLPAIPEIDSL
                     MSAFAARAKVPGIAYGVIVDGKVVHIGVSGVRNVETGARVDTNTVFRIASMTKSFTAL
                     SILKLRDEGRLSLDDPAERYVPELKALRYPTTDSPKITVRHLLSHSAGFPEDNPWGDQ
                     QLAATQEEMSAMIRRGIPFSTSPGTSYEYSNFGFAILGRIVANVSGMPYARYVRTRIL
                     LPLGMTSTTLEARDVPANRLAHGYRLQDGQWLEEPQLPDGAFGAMGGMLTSVSDLGKW
                     VGFLLDAWPARDGAERGPVKRSSVREMQQVVRFNGATAVRDSATNTISLSAGGYGYGL
                     GIRQTCAFPALVSHSGGLPGFGSIMRWLPEYGVGIVALGNLTYTGWGGPTLRSLEILA
                     RDRAPREPAPAPILVTRRAQTSRLIAHWTEPLADSLAAMNLFLDESKPRRRASIEALT
                     AKVGGGCRDEGPLVAENRLRGQWRMRCRDGDLRVSITLAPTEPAGVQYLAVSPMRRDD
                     TLAPPPACR"
     gene            1621..2250
                     /locus_tag="VFN38_17975"
     CDS             1621..2250
                     /locus_tag="VFN38_17975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013720.1"
                     /translation="MRILNWSLAFAALPAVLSAQAAHHPAEPQSAAAPSAPLTEAQQI
                     ASALLPLPAEFRADARVLGYRAGTKGLVTLRDARGAFVCLASDPAMPRFHVACYHRSL
                     EPFMARGRALRAAGVKGDQVDSARFREIRRGTLAMPKQPAALYSLSGPPGSYDAAANT
                     ASGARALSVIYISGATTASTGLSATPTEGAPWLMFPGTPKAHIMLVPKM"
     gene            2410..>4109
                     /locus_tag="VFN38_17980"
     CDS             2410..>4109
                     /locus_tag="VFN38_17980"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HET9013721.1"
                     /translation="MDSTHLLEALHRARRRIGLATTGQQVRPASIPDAVQSDGAGSPD
                     AVALRDFATRRRTEDALRESDEKFHQLADNISDAFWIRSPDMRELYYVSPAFERIWGR
                     PVETLYSDPGLWQEFILAEDRERVLAAFAKLPSESASLDLEYRIVRPDGGIRWIRVRS
                     FQVHDAEGRLIRQTGIVTDITEAKRVRAALEASAEEFRTLAEAMPQIVWITGPDGDNS
                     YCNQQWMDYTGLDRAQGLGDGWLRSFHADDRERVSRAWRSTEPSTLGNGTEGRLRRAD
                     GTYRWWLIRSVPVRDAGGGIIKWIGTCTDIHDLKVAELEISRVNRALQVLSACSEAVM
                     RAEHERALLGEICRIAVDDGGYRMAWVGYALDDVLGTIEPVAHAGVEDGYLADVHAAW
                     TVDDPQAQGPAGQALRGGRAVVCEDLLGDPRYARWIPAARLRGYRGVIVLPLRDGDRT
                     FGVLALYTDVIAATSAQELALLQEMADNLAFGIVHVRARMDQQRLQAAVIKVASGVSA
                     ATGTQFYEQLARNMADALGAQAGFVAELLPDDPNVARTIAAIVDGELAENFEYRLAGT
                     P"
BASE COUNT          564 a         1547 c         1404 g          594 t
ORIGIN      
        1 cggcatcatg ctggcgctcc ccaccctggc cgatggccag gcctccggcg ccggcggcgg
       61 atccgccgcg cgcccgccct ccgagctggc gcgcccctcg acgcttcccg ccatcccgga
      121 gatcgactcc ctcatgtcgg ccttcgccgc gcgcgcgaag gtccccggca tcgcatacgg
      181 cgtcatcgtc gacggcaagg tcgtccacat cggcgtctcc ggcgtgcgca acgtcgagac
      241 gggcgcgcgc gtggacacca acacggtgtt ccgcatcgcg tccatgacga agagcttcac
      301 cgcgctctcc atcctgaagc tgcgcgacga ggggaggctc tccctcgacg atcccgccga
      361 gcggtacgtg cccgagctga aggcgctgag atacccgacg acggattcgc cgaagatcac
      421 cgtccggcac ctgctctcgc actcggccgg cttccccgag gacaacccgt ggggcgacca
      481 gcagctcgcg gccactcagg aagagatgtc ggcgatgatc cgccgaggca tccccttctc
      541 gacgtcgccc ggcacgagct acgagtactc gaacttcggc ttcgccatcc tcggccgcat
      601 cgtcgccaac gtctcgggga tgccgtacgc gcgctacgtc cgcacccgca tcctcctccc
      661 gctcggcatg acgtcgacga cgctggaggc gcgcgacgtt cccgccaacc gcctcgccca
      721 cggctaccgc ctccaggacg gccagtggct cgaggagccg cagctccccg acggcgcgtt
      781 cggcgccatg ggcgggatgc tcacctccgt ctcggacctc ggcaagtggg tgggcttcct
      841 gctcgacgcc tggccggcgc gcgacggcgc cgagcgcggc ccggtgaagc gctcgtcggt
      901 gcgcgagatg cagcaggtcg tccgcttcaa cggcgcgacg gcggtgcgcg attcggccac
      961 caacaccatc tcgctcagcg ccggcggcta cggctatggg ctcggcatcc gccagacctg
     1021 tgcgttcccc gcgctcgtgt cgcacagcgg cggcctgccg gggttcggct ccatcatgcg
     1081 ctggctcccg gagtacggcg tcggcatcgt cgccctcggc aacctcacct acaccggctg
     1141 gggcggcccc acgctgcggt cgctcgagat cctcgcgcgc gaccgtgcgc cccgggagcc
     1201 tgcgcccgcg cccatcctcg tcacccgtcg cgcgcagacg tccaggctga tcgcgcactg
     1261 gaccgaaccg ctcgccgact ccctcgccgc catgaacctc ttcctcgacg agtcgaagcc
     1321 gcggcgtcgc gcttccattg aagcgctgac ggccaaggtc ggcggcggct gccgcgacga
     1381 ggggccgctg gtggccgaga accgcttgcg cggccagtgg cgcatgcgct gccgggacgg
     1441 cgacctgcgc gtgagcatca ccctcgcccc caccgagccg gcgggggtgc agtacctcgc
     1501 cgtctctccc atgcgccgcg acgacacgct ggcgccgccg cccgcatgcc ggtgacgagg
     1561 cgccggtgga ctgcggccgg cgctgcgcct acgcttcggt actccaatcc acatcttcga
     1621 atgcgcatcc tgaactggtc cctcgccttc gccgccctgc cggccgtgct gtccgcacag
     1681 gctgcacatc atcccgccga gccgcagtcc gcggccgcgc cctcggcgcc gctcaccgag
     1741 gcgcagcaga tcgcgtccgc cctgctcccg ctccctgccg agttccgcgc cgacgcgcgc
     1801 gtgctcggct atcgtgccgg cacgaagggg ctcgtgacgt tgcgcgatgc gcgcggggcg
     1861 ttcgtctgcc tcgccagcga tccggcgatg ccgaggttcc acgtcgcctg ctaccatcgc
     1921 tcgctggagc cgttcatggc gcgcggccgg gcgctgcgcg ccgccggcgt gaagggcgac
     1981 caggtggaca gcgcgcgctt ccgcgagatc cgcaggggaa ccctcgcgat gccgaagcag
     2041 ccggcggcgc tctattcgct ctccggaccg cccgggagct acgacgccgc cgcgaacacc
     2101 gcgtccggcg cgcgcgcgct ctccgtcatc tacatctccg gcgccaccac ggcgtccacc
     2161 ggcttgtccg ccacgcccac ggaaggcgca ccgtggctca tgttcccggg cacgccgaaa
     2221 gcgcacatca tgctcgtgcc gaagatgtga cctgagctgg gccggtatcg gagttcccgg
     2281 cccttcggtg ctgtcgaggc cgctgcctgc gccgaagctg caccttcaac cttcatcgga
     2341 cgatactccg gggtagagtg atcgtccggc tgtccgtccc gctgccggtc tccgacctgt
     2401 gtcagcgtga tggactccac ccacctgctc gaggcattgc atcgcgcccg tcgtcgcatc
     2461 ggcctcgcga cgaccgggca gcaggttcgg ccggcgtcca tccccgacgc cgtgcagtcg
     2521 gacggcgcag gctcgccgga cgcggtggcc ctgcgcgact tcgcgacgcg ccggcgaacg
     2581 gaagacgcgc tgcgcgagag cgacgagaag ttccaccagc tcgccgacaa catctccgac
     2641 gccttctgga tccgctcgcc ggacatgcgg gagctgtact acgtcagccc ggcgttcgag
     2701 cgcatctggg gccggccggt ggagacgctg tactccgatc cggggctgtg gcaggagttc
     2761 atcctggccg aggaccgcga gcgggtgctc gccgccttcg ccaagctgcc gagcgagtcc
     2821 gcgtcgctcg acctcgagta tcgcatcgtg cggcccgacg gcgggatccg ctggatccgc
     2881 gttcggtcct tccaggtgca cgatgccgag gggcggctga tccggcagac cggcatcgtc
     2941 accgacatca ccgaggcgaa gcgggtgagg gcggcgctcg aggcgagcgc cgaggagttc
     3001 cgcacgctgg ccgaggcgat gccgcagatc gtctggatca ccgggccgga cggcgacaac
     3061 tcctactgca accagcagtg gatggactac acggggctcg accgcgcgca ggggctcggc
     3121 gacgggtggc ttcgctcgtt ccacgccgac gaccgggagc gggtgtcgcg ggcctggcgg
     3181 agcactgaac cgtccaccct gggcaacggg accgagggcc gccttcgtcg cgccgacggg
     3241 acctaccgct ggtggctcat ccgcagcgtg ccggtgcgcg atgccggcgg cggcatcatc
     3301 aagtggatcg gcacctgcac cgacatccac gacctcaagg tcgccgagct cgagatctcc
     3361 cgcgtcaacc gcgcccttca ggtgctgagc gcctgcagcg aggcggtgat gcgggcggag
     3421 cacgagcggg cgctgctcgg cgagatctgc cggatcgccg tcgatgacgg cggctaccgg
     3481 atggcgtggg tggggtacgc cctggacgac gtgctcggca cgatcgagcc ggtcgcgcat
     3541 gccggggtgg aagacggata tctcgccgac gtgcacgccg cgtggacggt ggacgatccg
     3601 caggcccagg gaccggcggg ccaggcgctc cgcggcgggc gcgccgtggt gtgcgaggac
     3661 ctgctgggcg acccccgcta tgcacgctgg atccccgccg cgcgcctgcg cggctaccgc
     3721 ggcgtcatcg tgctccccct gcgcgacggg gatcgcacct tcggcgtgct cgcgctctac
     3781 accgacgtca tcgccgcaac gagcgcgcag gagctcgcgc tgctgcagga gatggccgac
     3841 aacctcgcct tcggcatcgt ccacgtgcgc gcgcggatgg accagcagcg gctgcaggcg
     3901 gcggtgatca aggtggcgag cggggtgtcc gccgccacgg gcacgcagtt ctacgagcag
     3961 ctcgcccgca acatggccga cgcgctcggc gcccaggcgg gattcgtggc cgagctgctc
     4021 ccggacgatc cgaacgtcgc gcgcaccatc gccgccatcg tggacggcga gctcgcggag
     4081 aacttcgagt atcgcctggc cggcacgcc
//
LOCUS       DASSYW010001141         2308 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_465660, whole genome shotgun sequence.
ACCESSION   DASSYW010001141 DASSYW010000000
VERSION     DASSYW010001141.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2308)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2308)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2308
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_465660"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1248
                     /locus_tag="VFN38_17985"
     CDS             <1..1248
                     /locus_tag="VFN38_17985"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HET9013722.1"
                     /translation="RANAARITDSVRALLALRYPRHEVVLVHDGGIDGHLAALIDAFE
                     LYAVPPAVLVNVPTGAVRGYYRSRRHGKLFVIDKPFAGHADDLNAALNASRFPYILTM
                     DVGTALQPDALSRLMRPFLIGQRVAAVAGTVRIADGERGAVPTDARARVPSDWLAGVR
                     AVQSLRDEVYDRIGWNRLGGQHATHGGVLLHRRDHLLEVDGYRHGPADPELELLMRVR
                     HHLRVQRLADAVPVLPEPVGWTDARTSLQLLARGRDAVYRGQLEVLRERRASLFTSRL
                     ATTRLLASAHLLAVAVLAPVLELAGYLLLLLALLVHGPADPFVPLFVLAVPGFALLLT
                     LWAVAIEAASVSGRGAGRGVVRLCVFAVAEQLGFRQWLAWRRLRAMWAVLRGGPSGER
                     ERVVAALGVEDAALSPAERARAR"
     gene            1334..>2308
                     /gene="tal"
                     /locus_tag="VFN38_17990"
     CDS             1334..>2308
                     /gene="tal"
                     /locus_tag="VFN38_17990"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004801 - transaldolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HET9013723.1"
                     /translation="MPDNRLKQLHDAGVSIWLDFIDRTILRNGDLARRIRDDALTGMT
                     SNPTIFEKALAEGTAYDDQLRGAPRTHMAMELFELVETSDVRDACDLFMPVYTATGGG
                     DGYVSIEVSPASANDAHATVAEAQRLWAMVDRPNVMIKVPGTPEGAVAVRTLIGAGLN
                     VNITLLFSLEAHRRVIHAYLEGLEDRRRAGKPVDGIASVASFFVSRVDTEIDKRLDAL
                     AATKSGAERERVLALRGKAAIANAKLAYALFREEFSSPRFAALQAQGARVQRPLWAST
                     GVKNPAYRDTIYVEELVGPDTVNTMPPALIDAFRDHGETRRTVDQDLDA"
BASE COUNT          298 a          825 c          841 g          344 t
ORIGIN      
        1 cgggcgaacg cggcacgaat caccgacagc gtgcgcgcgc tcctcgccct gcggtatcca
       61 cggcacgagg tggtgctcgt gcacgacggt ggcatcgatg gccacctcgc cgcgctgatc
      121 gacgcgttcg agctctacgc ggtgccaccc gccgtgctgg tgaacgtccc gacgggagcg
      181 gtgcgtggct actaccgctc gcgccgccat ggaaagctgt tcgtgatcga caagccgttc
      241 gcggggcacg cggacgacct gaacgccgcg ctgaacgcct cgcgctttcc gtacatcctc
      301 accatggacg tgggcaccgc gcttcagccg gacgcgctgt cgcgcctcat gcgtcctttc
      361 ctcatcgggc agcgcgtcgc ggccgtggcc ggcacggtgc gaatcgcgga cggcgaacgc
      421 ggcgcggtgc cgacggatgc gcgcgcgcgc gtgccgtcgg actggctcgc cggcgtgcgc
      481 gccgtgcaga gcctgcgcga cgaggtctac gaccgcatcg gatggaaccg gcttggcgga
      541 cagcacgcga cgcacggtgg agtgctgctg catcgccgcg accacctgct ggaggtcgac
      601 ggctaccggc acggacccgc cgacccggag ctcgagctcc tgatgcgggt gcggcaccat
      661 ctgcgggtgc agcgtctcgc cgacgccgtg ccggtgctcc ccgagccggt gggctggacc
      721 gacgccagga cgtcgctgca actgctcgcc cggggacgcg acgccgtcta ccgggggcag
      781 ctcgaggtgc tgcgcgagcg ccgggcgtcg ctcttcacct cccgcctcgc caccacgcgc
      841 ctgctcgcgt ccgcgcacct gctcgccgtg gcggtgctgg cccccgtgct ggagctggcg
      901 ggatacctgc tgctcctgct cgcgctgctg gtgcacggcc ccgccgatcc cttcgtgccg
      961 ctcttcgtgc tcgccgtccc cggattcgcg ctgctcctca cgctctgggc ggtggcgatc
     1021 gaggccgcca gcgtgagcgg gcgcggggcc gggcgcggcg tcgtgcgcct gtgcgtcttc
     1081 gccgtggccg agcagctcgg ctttcggcag tggctggcct ggcgccgcct tcgcgccatg
     1141 tgggccgtgc ttcgcggcgg gcccagcggc gagcgggagc gcgtcgtggc cgcgctggga
     1201 gtggaggacg cggcgctctc gccggcggag cgcgcccgcg cacgctgacg tcggcttcca
     1261 gcggggtgta tcttatcgag ggcgacgctg cgcgtcgcca ttcccgcggt cccgtcgccc
     1321 ccgagtcgcc ctgatgcctg acaatcgcct gaagcagctg cacgatgccg gagtctccat
     1381 ctggctggac ttcatcgacc gcaccatcct gcgcaacggc gacctggcgc gccgcatccg
     1441 cgacgatgcc ctgacgggga tgacgtcgaa cccgacgatc ttcgagaagg cgctcgccga
     1501 ggggaccgcc tacgacgacc agctgcgcgg cgccccgcgc acccacatgg cgatggagct
     1561 gttcgagctg gtcgagacct ccgacgtccg cgacgcctgc gacctgttca tgccggtgta
     1621 cacggcgacg gggggcgggg acggctacgt ctccatcgaa gtgtcgccgg cgtcggccaa
     1681 cgacgcgcac gccaccgtgg ccgaggcgca gcggctgtgg gcgatggtgg accgcccgaa
     1741 cgtgatgatc aaggtgcccg gcacgcccga aggggcagtg gcggtgcgga cgttgatcgg
     1801 ggcggggctc aacgtgaaca tcaccctgct gttctcgctc gaggcgcacc gccgggtgat
     1861 ccacgcctac ctcgaggggc tggaggatcg ccgccgggcc ggcaagccgg tggatgggat
     1921 cgcctcggtg gcttcgttct tcgtgagccg ggtggacacg gagatcgaca agcggctcga
     1981 tgcccttgcc gcgacgaagt cgggcgcgga gcgggagcgg gtgctggcgc ttcggggcaa
     2041 ggccgcgatc gcgaacgcca agctcgcgta cgcgctgttc cgcgaggagt tctcctcgcc
     2101 gcgcttcgcc gcgctgcagg cgcagggcgc ccgcgtccag cggccgctct gggcgagcac
     2161 gggggtgaag aaccccgcat atcgcgacac gatctacgtc gaggagctcg tcggtcccga
     2221 cacggtgaac acgatgccgc ccgcgctcat cgatgccttc cgcgaccacg gcgagacgcg
     2281 ccgcacggtg gaccaggacc tcgatgcg
//
LOCUS       DASSYW010001142         2550 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_510090, whole genome shotgun sequence.
ACCESSION   DASSYW010001142 DASSYW010000000
VERSION     DASSYW010001142.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2550)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2550)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2550
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_510090"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1028
                     /locus_tag="VFN38_17995"
     CDS             <1..1028
                     /locus_tag="VFN38_17995"
                     /inference="COORDINATES: protein motif:HMM:NF041359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="threonine aldolase family protein"
                     /protein_id="HET9013724.1"
                     /translation="ETVNLWSDTQTRPSAGMRQAMAEAEVGDEQRMLDPTVNALQERV
                     AELLGHEAALFLPSGTMCNQIAIRLHTRPGDEVILERFSHPIIAESGGPAAHSGVMMQ
                     PIDGEGGMFTADQVRASLRTPGSRYEPRSRLLCVEQTTNYGGGRVWPLDQMRGVLGAA
                     KESGILTHLDGARLMNAVVASGVSAADYASEFDTAWIDFTKGLGAPVGACLAGSRAVI
                     HEAWRYKQMMGGALRQAGIVAAAGMYALDHNVERLAEDHANARTLAEGIAAIDGARID
                     PSTVETNIVIFEVDDPARVFGGLFERGVEMTPMGPGRIRAVTHLDVDAEGIQRALAAL
                     EEVLAAA"
     gene            1097..1417
                     /locus_tag="VFN38_18000"
     CDS             1097..1417
                     /locus_tag="VFN38_18000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013725.1"
                     /translation="MAMVLIQEPPIPITGEMYDAVSAKLDLDNEPPEGMIAHTAGADE
                     SGQWRIVDVWESAEAFQTFRSERLGPAIEATAREFGVEAGEPKMTMYDAHHVLVPAPA
                     HAHA"
     gene            1447..1662
                     /locus_tag="VFN38_18005"
     CDS             1447..1662
                     /locus_tag="VFN38_18005"
                     /inference="COORDINATES: protein motif:HMM:NF020917.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDGSH iron-sulfur domain-containing protein"
                     /protein_id="HET9013726.1"
                     /translation="MDEARITPYRDGPLLVRGPFKLTDQDGNEIDARRRTVALCRCGK
                     SQLKPFCDGTHKLIGFRADSAGPAERG"
     gene            complement(1659..>2550)
                     /locus_tag="VFN38_18010"
     CDS             complement(1659..>2550)
                     /locus_tag="VFN38_18010"
                     /inference="COORDINATES: protein motif:HMM:NF025871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="iron-containing redox enzyme family protein"
                     /protein_id="HET9013727.1"
                     /translation="HLALYVLYELYYASFEGVADGWEWEPSLIALRATLERAFEAELE
                     QLAGGAAAPAAERVGDELVELVRADDGPPLARYVETRATLDQVLELVVCRSVYNLKEA
                     DPHSWALPRLRGAPKSALVEIQADEYGGGRPDRMHAVLFAASMDALGLDSRYGAYLDV
                     VPGIGLASVNLMSLFGLQRRWRGAIVGHLAAFEMTSSQPNRRYAGGLRRLGFGSEATE
                     FFDEHVEADAVHENIAAFDMAGGLARQQPELAGDILFGARCLLALEAEAARRMLEAWE
                     RGEPALLRPLRAVVAAGLSR"
BASE COUNT          389 a          915 c          931 g          315 t
ORIGIN      
        1 cggagacggt caacctctgg tcggacacgc agacccgccc gtcggcgggg atgcggcagg
       61 cgatggccga ggccgaggtg ggcgacgagc agcggatgct cgaccccacg gtgaacgcgc
      121 tgcaggagcg cgtcgccgag ctgctcgggc acgaggcggc gctgttcctg ccgtccggca
      181 cgatgtgcaa ccagatcgcc atccggctgc acacgcggcc cggcgacgag gtgatcctcg
      241 agcgcttctc gcatccgatc atcgccgagt ccggcggccc ggcggcgcac tccggcgtga
      301 tgatgcagcc gatcgacggc gagggcggga tgttcaccgc cgaccaggtg cgcgcgtcgc
      361 tgcgcactcc cgggagccgc tacgagccgc gctcgcgcct cctctgcgtg gagcagacca
      421 ccaactacgg cggcggccgc gtctggccgc tcgaccagat gcgcggagtg ctcggcgcgg
      481 caaaggagag cggcatcctc acgcacctcg acggcgcgcg gctgatgaac gccgtcgtgg
      541 cctcgggcgt gagcgcggcc gactacgcgt cggagttcga caccgcctgg atcgacttca
      601 ccaaggggct cggcgctccc gttggcgcct gcctcgccgg ctcgcgcgcg gtgatccacg
      661 aggcgtggcg ctacaagcag atgatgggcg gcgcgctgcg ccaggcgggc atcgtggcgg
      721 ccgcgggcat gtacgcgctc gatcacaacg tcgagcggct ggccgaggac cacgcgaacg
      781 cgcgcaccct ggcggagggg atcgcggcga tcgacggcgc ccggatcgac ccctccaccg
      841 tcgaaacgaa catcgtgatc ttcgaggtgg acgaccccgc ccgcgtcttc gggggcctct
      901 tcgagcgtgg cgtggagatg acgccgatgg ggcctggccg catccgcgcc gtcacccacc
      961 tcgatgtcga cgcggagggc atccagcggg cgctggcagc cctcgaagag gtactcgccg
     1021 cggcctgatc ggggctcttg gaatggccgg gcggccgaat tagagtcggc ccgtacccga
     1081 accatgggag gccaaaatgg cgatggttct gatccaggag ccgccgatcc cgatcaccgg
     1141 cgagatgtac gacgcggtga gcgcgaagct ggacctcgac aacgagccgc cggaggggat
     1201 gatcgcgcac accgccggcg ccgacgagag cgggcagtgg cgcatcgtgg acgtgtggga
     1261 gtcggcggag gcgttccaga ccttccgcag cgagcggctc gggcccgcga tcgaggcgac
     1321 ggcgcgcgag ttcggagttg aggccggcga gccgaagatg acgatgtacg acgcgcatca
     1381 cgtgctcgtg ccggcgcccg cgcacgcgca cgcttgaaac gagtccgcgc cgggcacagg
     1441 cccagcgtgg acgaagccag gatcactcca taccgcgacg ggccgctgct tgtgcgcggc
     1501 ccgttcaagc tcaccgacca ggacggcaac gagatcgacg cgcggcgcag gacggtggcg
     1561 ctgtgccgct gcggcaagtc gcagctcaag ccgttctgcg acggcaccca caagctgatc
     1621 ggcttccggg ccgacagcgc cgggccggct gagcgcggct agcggctcaa gcccgccgcg
     1681 acgaccgcgc ggagcggccg cagcagcgcc ggctcgccgc gctcccacgc ctcgagcatg
     1741 cgcctcgcgg cctccgcttc gagcgcaagc aggcagcggg cgccgaacag gatgtcgccc
     1801 gcaagctcgg gctgctggcg ggcgaggccg cccgccatgt cgaacgccgc gatgttctcg
     1861 tgcaccgcgt cggcctccac gtgctcgtcg aagaactccg tcgcctcgct gccgaagccg
     1921 agccgccgga gcccgcccgc gtagcggcgg ttgggctggg acgaggtcat ctcgaacgcc
     1981 gccaggtggc ccacgatcgc gccgcgccag cgccgctgga ggccgaagag cgacatcagg
     2041 ttcacgctcg cgagcccgat gccgggcacg acgtcgaggt aggcgccgta gcggctgtcg
     2101 agcccgagcg cgtccatcga cgcggcgaac agcaccgcgt gcatccggtc cggccggccg
     2161 ccgccgtact cgtccgcctg gatctcgacg agcgccgact tcggcgcgcc gcggaggcgc
     2221 ggcagcgccc atgagtgcgg gtccgcctcc ttcaggttgt agaccgaccg gcacaccacc
     2281 agctcgagca cctggtcgag cgtcgcgcgc gtctcgacgt atcgcgccag cggcggcccg
     2341 tcgtcggcgc gcacgagctc cacgagctcg tcaccgactc gctccgcggc gggagcggcc
     2401 gcgccgcccg cgagctgctc gagctcggcc tcgaacgccc gctcgagcgt ggcgcgcagc
     2461 gcgatgagcg agggctccca ctcccagccg tccgcgacgc cctcgaacga cgcgtagtag
     2521 agctcgtaga gcacgtagag ggccaggtgg
//
LOCUS       DASSYW010001143         2065 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1542226, whole genome shotgun sequence.
ACCESSION   DASSYW010001143 DASSYW010000000
VERSION     DASSYW010001143.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2065)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2065)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2065
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1542226"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            364..1422
                     /locus_tag="VFN38_18015"
     CDS             364..1422
                     /locus_tag="VFN38_18015"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HET9013728.1"
                     /translation="MNQNGPVRGHILAVDDQQPNLTLLTQMLEAEGHIVRTAGTGLSA
                     LEAIDRQPPDLILLDVGLPDINGFEVCRRLKHNPLTRLTPVVMVTGLNSREHRIEGIN
                     AGADDFLGKPFDSGELRARVGSLLRLKRYTDDLESAESVILSLALTVEARDPYTDGHC
                     QRLAEYASSLGRALGLSNEEVSALHRGGYLHDVGKIGIADAILQKPTPLNAVEYATMK
                     AHTVIGDRLCGNLRSLALVRPIVRHHHELLNGAGYPDGLVGDQIPLLAQIVGVVDAYD
                     AMTTSRPYRAALPVEAAHEELRRDVARGWRRRDLVESFIALPLKSAIRTPVPAPAAPR
                     ARMLKAPANTPWGKRRVS"
     gene            1621..>2065
                     /locus_tag="VFN38_18020"
     CDS             1621..>2065
                     /locus_tag="VFN38_18020"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HET9013729.1"
                     /translation="MGERAGFDVTLCADGTEALNELRQHHHDLAAVDLCMPGTGGLDV
                     LRAIRTADLDCQVILMSGGATIDNAVEAIKLGAVDFLTKPLDLERFLQLLGTVREEIS
                     RREHLLKAESRAAQSAEFCGMIGRGPASQQLFDLIRRLAPHVRTAL"
BASE COUNT          355 a          744 c          648 g          318 t
ORIGIN      
        1 tcatcaggat ccttcggggc taaggctaga gcttgaaggc caggggcttc aaggttcccg
       61 gaacggccat cgccatgcag agaccggcgg tccagatcga cagcgtgcgg cgcatgtcca
      121 cctcctccgc gcaaagtcta caggaggaag cgcctgggcg tgcccgcaca cctttctgag
      181 cgctcccgca cactgcacag aagcgcacat cggggcactg cccgcaactt atgctgctcc
      241 tgtggtttat cctgcgttgg gtcaggcgcc acatgcggca cgcctcgtgc tgttgaaccc
      301 tgtggaaatc ggggccggcg gaggccggaa acagcaagct gagagatcag ggacgcactc
      361 gatatgaacc agaatgggcc agtacgcggc cacatcctcg ccgtagacga ccagcagccg
      421 aacctcaccc tgctcaccca gatgctcgaa gccgaggggc acatcgtgcg caccgccggc
      481 acggggctct cggcgctcga agccatcgac cgccagccgc cggatctcat cctgctcgac
      541 gtcggcctcc ccgatatcaa cgggttcgag gtgtgccgcc ggttgaagca caaccccctc
      601 acgcggctga ctcccgtggt catggtcacg gggctcaact cgcgggaaca ccgcatcgaa
      661 ggcatcaacg cgggagcgga cgacttcctg ggcaagccgt tcgactccgg tgagctccgc
      721 gcccgcgtcg gctccctcct tcggctgaag cgctataccg acgacctcga gtcggccgaa
      781 tccgtcattc tcagcctcgc gctcaccgtc gaagcgcgcg atccgtacac ggacgggcac
      841 tgccagcgcc tggcggaata cgccagctcc cttggccgcg ccctgggctt gtcgaacgaa
      901 gaggtgagcg cgctccatcg gggcggctac ctgcacgacg tgggcaagat cgggatcgcc
      961 gacgcgatcc tgcagaagcc cacgccgctc aacgccgtcg agtacgccac catgaaggcg
     1021 cacacggtga tcggcgaccg gctgtgcggc aacctgcgct cgctcgcgct ggtgcggccg
     1081 atcgtgcggc atcatcacga gctgctgaac ggcgccggct atcccgacgg tctcgtcggc
     1141 gatcagatcc cgctcctcgc acagatcgtg ggcgtcgtgg acgcctatga cgcgatgacc
     1201 acatcgcgcc cctaccgggc cgccctcccg gtggaagccg cacacgaaga actgcggcgt
     1261 gacgtcgcgc gcggctggcg ccgccgcgac ctggtggaat ccttcatcgc gctcccgctc
     1321 aagagcgcca tccgcacacc ggtgcccgct cccgccgcac cgcgtgcgcg catgctgaaa
     1381 gcgcccgcca acacgccgtg ggggaagcgg cgcgtctcgt agcacatcct gctaacctac
     1441 ggtccaggcg ggttctcact ccttcacact tttcgaagtg tgcggtcccg cacaggcgaa
     1501 gccaggcgcg aatccgccga tgtcctcggc taagattcaa cccctgtggc ggcttccccc
     1561 ccacgcccga cgctgctggt cgtcgacgac gaccgtggaa tacgcgagct ggtccggtcc
     1621 gtgggcgaac gcgcgggctt cgacgtgacg ctgtgcgccg acggcaccga ggcgctgaac
     1681 gagctccgcc aacaccatca cgacctcgcc gctgtcgatc tgtgcatgcc gggcacgggc
     1741 ggcctcgacg tcctgcgcgc catccgcaca gcggatctcg actgccaggt gatcctgatg
     1801 agcggtgggg ccacgatcga caacgcggtc gaggccatca aactcggcgc cgtggacttc
     1861 ctcaccaagc cgctcgatct cgagcgcttt ctccagctgc tcggcaccgt tcgcgaagaa
     1921 atcagccggc gcgagcacct gctcaaggcc gagagccgcg cggcgcagag cgccgagttc
     1981 tgcgggatga tcggccgcgg gccggcgtcg cagcagctct tcgatctgat ccgccgcctg
     2041 gcgccgcatg tgcgcacggc gctca
//
LOCUS       DASSYW010001144         3123 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_178903, whole genome shotgun sequence.
ACCESSION   DASSYW010001144 DASSYW010000000
VERSION     DASSYW010001144.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3123)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3123)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3123
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_178903"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            301..966
                     /locus_tag="VFN38_18025"
     CDS             301..966
                     /locus_tag="VFN38_18025"
                     /inference="COORDINATES: protein motif:HMM:NF025013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4142 domain-containing protein"
                     /protein_id="HET9013730.1"
                     /translation="MPSTNHRHAPRRAILSAVAATLMAACATDDSAARRDSIVAAAEE
                     AYAASHRASAPPDTTDSVSRAPAAFTDNNVLARVAQDDRLEVQVARIAIGKITSPALK
                     DFARQIADNHSAGESDARRLSQKLKIPEQPAANDTTKLHQQNLVALFTRLAKGKAFDT
                     TYVRHLVDGHAAMLRELKALQARATHPEVKQLLVNAEPEVQRHLNRAREIGKALTAAK
                     PGA"
     gene            998..1324
                     /locus_tag="VFN38_18030"
     CDS             998..1324
                     /locus_tag="VFN38_18030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HET9013731.1"
                     /translation="MKTASLDSTAAAGLFHALSDPIRIEVLELLGSGERCVCDLTEVL
                     DVAQSRLSWHLKTLKDAGLVTDRREGRWSYYTLQPDAFAQAEAALAALRPRARKLAVR
                     AGGCCG"
     gene            1382..2296
                     /locus_tag="VFN38_18035"
     CDS             1382..2296
                     /locus_tag="VFN38_18035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenite methyltransferase"
                     /protein_id="HET9013732.1"
                     /translation="MTTDLTDLQATVKKRYGAAALRVADGQGGASCCAPAEGSSACCG
                     ATTESWDPITANLYDEGQTAGIPAEALLASLGCGNPTALAALNPGERVLDLGSGGGID
                     VLLSAKRVGPTGKAYGLDMTDEMLALANENKRRAGATNVEFLKGTIEQIPLPDASVDV
                     VISNCVINLSGDKRRVLEEAFRVLAPGGRFAVSDVVVRGRPPQAVRESMELWIGCVAG
                     ALEEREFLELLTAVGFENPSIEPTRIYKAADAAAFLAGTGLDIQRLAEEIDGKFMGAF
                     IRATKPALALPLAPTVAASSCCGPDCCA"
     gene            2293..2733
                     /gene="arsN2"
                     /locus_tag="VFN38_18040"
     CDS             2293..2733
                     /gene="arsN2"
                     /locus_tag="VFN38_18040"
                     /inference="COORDINATES: protein motif:HMM:NF040501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenic resistance N-acetyltransferase ArsN2"
                     /protein_id="HET9013733.1"
                     /translation="MSAAASIRGATEADAESIVGLVREAGLAVPGVVEHLSSFLIAER
                     DARPVGAIGLELRGDAALLRSAVVAPAERGAGVGGALVGAVLDLARREGVRTLYLLTT
                     SAEGYWTRHGFARVSREAVPERVRQSDEFLGACPASAAAMMRRV"
     gene            2805..>3123
                     /locus_tag="VFN38_18045"
     CDS             2805..>3123
                     /locus_tag="VFN38_18045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HET9013734.1"
                     /translation="MTIVTTPLRLAGVHHVSAVSAHISRTHDFYTRVLGLRPVIRTVN
                     QDAPSMYHLFFGDGIGSPGSDMTVFDLRGAAREHRGNNSVTRTNFRVAGGDTLVWWAA
                     RFDE"
BASE COUNT          483 a         1118 c         1092 g          430 t
ORIGIN      
        1 gtcgaagccg aaggctgggc ggccgcgcgc tgcgggggaa ccacggcgcc gaagacggcg
       61 agcgcgatca gcgtcgcggc gtggcgggag aggggacgat ccatcatcga ggctccggaa
      121 agacgggtcg agtcgccccg ctggagcccg cgccgggtgg cgcagccatc gggagcggcc
      181 gggtcaccgc agaatgcgac ccggcgcgag gatccgccac cggcaccgcg gctcgatggg
      241 cacgaggcgt gcgacaccgc gggcatgttc caccattccg cacataccgc gagcctctcc
      301 atgcccagca cgaaccaccg ccacgcgccc cgtcgcgcga tcctcagcgc ggtcgccgcg
      361 acgctcatgg ccgcctgcgc caccgacgat tcggcggccc gacgcgacag catcgtcgcc
      421 gcggcggagg aggcgtatgc cgcctcccat cgcgccagcg cccctccgga caccaccgac
      481 agcgtctccc gcgcgccggc ggccttcacc gacaacaacg tcctcgcccg cgtcgcacag
      541 gacgaccggc tcgaggtgca ggtcgcgcgg atcgccatcg gcaagatcac gagtcccgcg
      601 ctcaaggact tcgcccggca gatcgccgac aatcactcgg cgggagagag cgacgcccgg
      661 cgcctctcgc agaagctcaa gatccccgag cagccggccg ccaacgacac cacgaagctg
      721 caccagcaga acctcgtcgc cctgttcacg aggctcgcga aggggaaggc gttcgacacg
      781 acgtacgtcc gccatctcgt ggacggccac gccgccatgc tgcgcgagct gaaggccctg
      841 caggcgcggg cgacccatcc ggaggtgaag cagctcctcg tgaacgccga gcccgaggtg
      901 cagcggcacc tcaaccgcgc ccgcgagatc ggcaaggcgc tgaccgcggc caagccgggg
      961 gcttgaccat caagaaaact tgatgtaact tgccaccgtg aagaccgcct ccctcgactc
     1021 caccgccgct gccggcctgt tccacgccct gtccgatccc atccggatcg aggtcctgga
     1081 gctgctcggc agcggcgagc gttgcgtctg cgacctcacc gaggtgctcg acgtcgccca
     1141 gtcgcggctg tcctggcatc tcaagacgct caaggacgcc gggctcgtca ccgaccggcg
     1201 cgagggacgc tggagctact acaccctcca gcccgacgcc ttcgcgcagg cggaggcggc
     1261 gctggcggcc ctccgcccgc gcgcacgaaa gctcgctgtc cgcgccggcg gctgctgcgg
     1321 ctgacccggc cctttttttt ttcggcaata catcaagaaa actcgatcta gcgaggatgc
     1381 catgacgacc gatctgacgg acctgcaggc cacggtgaag aagcggtacg gtgcggcggc
     1441 gctgcgcgtc gccgacggac agggtggcgc atcctgctgc gcgcccgccg aaggatcgag
     1501 cgcctgctgc ggtgccacga ccgagtcgtg ggatccgatc accgccaacc tctacgacga
     1561 agggcagacg gcgggcatcc cggccgaggc gctgctcgcc tcgctcggct gtggcaaccc
     1621 gaccgcgctc gccgcgctca atccgggcga gcgggtgctg gatcttggct ccgggggtgg
     1681 aatcgacgtg ctcctctcgg ccaagcgcgt ggggccgacc gggaaggcgt acggcctcga
     1741 catgacggac gagatgctgg ccctggcgaa cgagaacaag cgtcgcgcgg gcgccaccaa
     1801 cgtcgagttc ctcaagggca ccatcgagca gatccccctg cccgacgcct cggtggacgt
     1861 cgtcatctcc aactgcgtga tcaacctgtc gggcgacaag cggcgtgtgc tcgaggaggc
     1921 cttccgggtg ctcgcgccgg gcgggcgatt cgccgtgtcg gacgtcgtcg tgcgcggccg
     1981 gccgccgcag gcggtgcgcg agagcatgga gctgtggatc ggctgcgtcg cgggggcgct
     2041 cgaggagcgg gagttcctcg agctgctcac cgccgtcggc ttcgagaatc cctccatcga
     2101 gcccacccgg atctacaagg ccgcggacgc cgccgccttc ctggccggga cggggctgga
     2161 catacagcgg ctggcggagg agatcgacgg caagttcatg ggcgccttca tccgggcgac
     2221 gaagcccgct ctcgctctcc cgctcgctcc gacggtggcc gcatcgagct gctgcggacc
     2281 ggattgctgc gcatgagcgc ggccgcttcc atccgtggcg cgacggaggc ggacgccgag
     2341 tcgatcgtcg gcctcgtccg cgaggccggc ctcgccgtgc cgggcgtggt cgagcacctg
     2401 agctccttcc tgatcgcgga gcgcgacgcg cgcccggtcg gtgccatcgg gctcgagctc
     2461 cgcggggacg cggcgctgct tcgctcggcg gtggtggcgc ccgctgagcg cggggccggc
     2521 gtcggcggcg ccctggtggg ggcggtgctc gacctcgccc gccgcgaagg ggtgcggacg
     2581 ctgtatctgc tcacgacgag cgccgagggc tattggacgc gccatggctt cgcgcgcgtg
     2641 tcgcgggagg cggtgccgga gagggtgcgg cagtcggacg agttcctcgg cgcctgcccg
     2701 gcctcggcag ccgccatgat gcgcagggtc tgacgtgggt ggtggcgacg tctcttgaca
     2761 tcgaacatct tagtagtgag attaatggca ggaggaacgc caccatgacc atcgtcacca
     2821 cgccactgcg actcgccggc gtccaccacg tcagcgcggt gagcgcgcac atctcacgca
     2881 cccacgactt ctatacccgc gtcctgggtc tccgcccggt gatccggacc gtgaaccagg
     2941 atgcgccgag catgtaccat ctcttcttcg gcgacggcat cggcagcccc ggatcggaca
     3001 tgacggtgtt cgacctgcgc ggggcggcgc gcgagcaccg cggcaacaac agcgtcacgc
     3061 gcacgaactt tcgcgtcgcc gggggcgaca cgctcgtgtg gtgggcggcg cgcttcgacg
     3121 agc
//
LOCUS       DASSYW010001145         2538 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_786695, whole genome shotgun sequence.
ACCESSION   DASSYW010001145 DASSYW010000000
VERSION     DASSYW010001145.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2538)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2538)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2538
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_786695"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1366)
                     /locus_tag="VFN38_18050"
     CDS             complement(<1..1366)
                     /locus_tag="VFN38_18050"
                     /inference="COORDINATES: protein motif:HMM:NF012975.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNB domain-containing ribonuclease"
                     /protein_id="HET9013735.1"
                     /translation="MLRYGLLPEFSPSALDEARRAAPVAPPDGAVRDTRGLLWTSIDN
                     DESRDLDQLSVAESLGGGRTRVLVAIADVDALVPTGSASDDHARTNTTSVYTPAEIFP
                     MLPERFSTDLTSLGEGDERLAVVVEMTVDAQGEVVGSDVYRARVLNKARLTYNAVGAW
                     LLDEGPLPAHAAGIKGLGDVLRLQDEAAQAMRRRRHAHGALTLDTLQAHPVFAGDAIT
                     DLQPDAKNRAKELIEDLMIAANAETAATLEKKGFAWIRRVLGVPRRWDRIVALARTFG
                     DALPDAPDAAALEAFLQKRRAADPERFPDVSLAVVKMLGSGEYAVEPPGSEPAGHFGL
                     AVSGYTHSTAPNRRFPDLITQRLIKAAIVGAPPPYDRDRLTELATHCTKQEDQAAKVE
                     RQVRKSAAALFLQSRVGERFHAIVTGASEKGTWVRTLGTPVEGRVVKGFAGLDVGDRV
                     DVRLV"
     gene            1460..2449
                     /locus_tag="VFN38_18055"
     CDS             1460..2449
                     /locus_tag="VFN38_18055"
                     /inference="COORDINATES: protein motif:HMM:NF013247.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class IV"
                     /protein_id="HET9013736.1"
                     /translation="MVTSNTRLPVLGADEVLATLRSLRVRQPVQFDAFYSSQLGGIVT
                     DPALMVLPFDDHMVHRGHGIFDTAGLVNGRIYDLEAHLDRFLGSAERSRLKLAGSRAD
                     MRDIIVKTAAVSSRREGAIRYWLSSGPGSLELSPAAGAEPGFFVMVFGGLQYPARWYS
                     EGLKVMTTTYPIKPPLYAITKATNYLPNVLMQMEAKEAGLDNGIFIDDDGFVGESSNM
                     NVAFVTTDGVLRHPRFVRVLAGCTSLRLLELAPHLQGSGLLTGVEVCDIPVADARAAR
                     EMLLLGSSIKVAPIVEWDGQPIGTGSPGPVARALLDLLENDMRTSDRLIDVPY"
BASE COUNT          380 a          887 c          849 g          422 t
ORIGIN      
        1 ccacgagccg cacgtccacc cggtcgccta cgtcgagccc cgcgaacccc ttcacgacgc
       61 gcccttccac cggcgtgccg agcgtccgca cccacgtccc tttctcggac gcacccgtga
      121 cgatggcgtg gaagcgctcg cccacgcgcg actgcaggaa cagcgcggcg gccgacttgc
      181 gcacctgccg ctccaccttc gcggcctgat cttcctgttt cgtgcagtgc gtggcgagct
      241 cggtgagccg gtcgcgatcg tagggcggcg gcgctccgac aatcgccgcc ttgatcagac
      301 gctgtgtgat cagatccggg aagcgccggt tcggcgcggt ggagtgcgtg tagccgctca
      361 ccgccaggcc gaagtgcccg gcgggctccg agcccggcgg ctcgacggca tactcgcccg
      421 agccgagcat cttcacgacc gcaagcgaga cgtccgggaa ccgctctgga tcggcggcgc
      481 gccgcttctg gagaaacgcc tcgagggccg ccgcatcggg cgcgtccggc agcgcgtcgc
      541 cgaaggtgcg cgccagcgcg acgatgcggt cccatcggcg cggcacgccg agcacgcgcc
      601 ggatccacgc gaagcccttc ttctcgagcg tggcggccgt ctccgcgttg gccgcgatca
      661 tcaggtcttc gatcaactcc ttcgcgcggt tcttcgcgtc gggctgcagg tcggtgatgg
      721 cgtcgcccgc aaacaccgga tgcgcctgca gcgtgtcgag cgtcagcgcg ccgtgcgcgt
      781 ggcgccgccg ccgcatcgcc tgcgccgcct cgtcctgcag ccgcagcacg tcgccgagcc
      841 ccttgatacc ggcggcgtgg gccggcagcg gaccttcgtc gagcagccag gcgccgacgg
      901 cgttgtaggt gaggcgcgcc ttgttcagta cgcgcgcacg gtagacgtcc gacccgacga
      961 cctcgccctg ggcgtccacc gtcatctcca ccaccaccgc cagccgctcg tcgccttcgc
     1021 caagtgaggt gaggtcggtc gagaaccgct cgggcagcat cggaaagatt tcggccgggg
     1081 tgtagaccga cgtcgtgttg gtgcgcgcgt gatcgtcgga cgccgatccg gtgggcacga
     1141 gcgcgtcgac gtccgcaatc gccacgagca ccctggtgcg gccgccgccg agcgactcgg
     1201 ccaccgacaa ctggtcgaga tcgcgcgact cgtcgttgtc gatcgacgtc cacagcaggc
     1261 cgcgcgtgtc gcgcacggca ccatcgggcg gcgcgaccgg cgcggcgcgg cgggcctcgt
     1321 cgagcgcgga gggcgaaaac tcgggaagca ggccgtagcg cagcatcgaa cggtgcgcaa
     1381 tgtttcggag gatgtcgcga tgggacatgg ctgatgtaga gggcggtctg aaggcctccc
     1441 tcagtgctag tgttgcccta tggtgacatc gaatacgcgc cttccggtgc tcggcgccga
     1501 cgaagtgctg gctactttgc gctcgttgcg cgtccgccag cccgttcagt tcgacgcgtt
     1561 ctactcgagt cagcttggcg gcatcgtcac ggatccggcg ctgatggtgc tgcccttcga
     1621 cgatcacatg gtgcaccgcg gccacggcat cttcgacacc gccggcctgg tgaacgggcg
     1681 catctacgat ctcgaagccc atctggatcg gtttctcggg tcggccgagc gctcgcgcct
     1741 gaagctcgcg ggctcgcgcg ccgacatgcg cgacatcatc gtgaagaccg ccgcggtcag
     1801 cagccggcgc gaaggcgcca tccgctactg gctgtcgtcg ggcccgggca gcctcgagct
     1861 cagtccggcc gcgggcgccg agcccggttt cttcgtgatg gtgttcggcg ggctgcagta
     1921 tccggcgcgg tggtattccg aaggcttgaa ggtgatgacg accacctatc cgatcaagcc
     1981 gccgctttac gcgatcacca aagccacgaa ctacctgccg aatgtcctga tgcagatgga
     2041 ggccaaggag gccggcctgg acaacggcat cttcatcgac gatgacggat tcgtcggcga
     2101 gagctccaac atgaacgtgg cgttcgtgac gaccgatggc gtcctgcgtc atccgcggtt
     2161 cgtccgcgtc ctggcgggct gcacgtcgct gcgtctgctc gaactggctc cgcacctcca
     2221 aggaagcgga ttgctgaccg gcgtggaggt gtgcgacatc cctgtcgcgg acgcacgtgc
     2281 cgcgcgcgag atgcttctgc tcggcagctc gatcaaggtc gcgcccatcg tcgaatggga
     2341 cggtcagccg attggtaccg gttcgccggg gccggtcgcc cgcgccctgc tcgatctcct
     2401 cgagaacgac atgcgcacca gcgatcgcct catcgacgtg ccctactgat tcgacccaga
     2461 ccccatcatg gtgcaagaca cgcgcttgac cccgctcgtg aacgcctcgc acgaggcgtt
     2521 gatgtttcca acgctgac
//
LOCUS       DASSYW010001146         3114 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1155337, whole genome shotgun sequence.
ACCESSION   DASSYW010001146 DASSYW010000000
VERSION     DASSYW010001146.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3114)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3114)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3114
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1155337"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1096
                     /locus_tag="VFN38_18060"
     CDS             <1..1096
                     /locus_tag="VFN38_18060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013737.1"
                     /translation="DAKLGAKGQDSPLDAHARRLTRIDREKARSFAEFAAFDLALDAH
                     TSETLDGIREAIGATDPVVLQLTCLLRLVRLEPNPEVVQRFITRATRFIEVLERDQRF
                     GEMAGWLAGLRQLAEGFREPRPDVAEAIDGGLVAFCTPHRAARLVDLAGRDEQGRVAA
                     GQIVAALGPGVGPALLEAITRQTQGAREMGRAVVQLLCEHAKLVAPSLAGALAAADPP
                     LHRVIARVLGHAGPGYEPPLGTLLASADEQAVREAFRSLARIGTPRAAALVAAQVDKG
                     KGWLGGAAEQTLWHFPQPEADRQVRELLGRRTFVTRHPQVAARLLERAAQNGGDSLTP
                     ILQTLTPLRYHFWSPAVMRVARQARNLLAQ"
     gene            1104..2489
                     /locus_tag="VFN38_18065"
     CDS             1104..2489
                     /locus_tag="VFN38_18065"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HET9013738.1"
                     /translation="MIEEHRLDPVALLKGLVSLRRLTGLYPPGHPSIEQKLTELDDNV
                     QRHIHAAAALRLDVIHGAAHLDGVPFRQDSEAQAQIIRELTDLGIDSIHIQHGVSRAE
                     LLALSEFLWQLKEAPAGEPIDVLLAAREIRYISLGRLVPLDTRWKTVQWPDAPTGPLD
                     PSYELSLALTERTFDDVMSGRGIDLATIREIVHLLIQKVAASNAALGQILAVKLYENL
                     TYCHSVNVATLSLLIGKQLGFDATATATLAEAALLHDIGKTRIPLEILKKPSALDKRE
                     RKMMEAHTTYGAEILVEVDGLRPLTPTVALEHHRGVDSTGYPDLGEGAVPHFLSQLVA
                     VADIYEAMTGARSYQEPAMPEQACLVLARLAGTKLNTALVKAFVSAISFFPLGSVVRT
                     DRDELGVVVRTNASEPLHPVIALMGAELERLPIEIDTSIRSTAGQYERHVVETLRPQE
                     GLDLNQYLAAS"
     gene            complement(2538..>3114)
                     /locus_tag="VFN38_18070"
     CDS             complement(2538..>3114)
                     /locus_tag="VFN38_18070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="family 20 glycosylhydrolase"
                     /protein_id="HET9013739.1"
                     /translation="IQARMKELGVTTEEELQSWFIRQMDTFLTSKGRRLIGWDEILEG
                     GLAENATVMSWRGLDGAIAAAKTGHDAVLTPTSHTYFDYYQVKDTSKEPLAIGGFLPL
                     DKVYTWEPMPAELEENARTHILGVQGQVWTEYLPNPKAVEYMAFPRMIALAEVAWTPT
                     RQRSYEGFKSRLATHLQRLQILDVNFRPLDP"
BASE COUNT          491 a         1119 c         1032 g          472 t
ORIGIN      
        1 cgacgccaag ctgggggcca aggggcagga ttccccgctc gacgcgcatg cgcggcgcct
       61 gacgcgcatc gatcgcgaga aggcgcgcag cttcgccgag ttcgccgcgt tcgacctcgc
      121 gctcgacgcg cacacgtcgg agacgctcga cggaatccgc gaggcgatcg gcgccaccga
      181 cccggtcgtc ctgcagctga cctgtctatt acgcctggtc cggctggagc cgaatcccga
      241 ggtcgtgcag cgcttcatca cgcgcgcaac gcgtttcatc gaagtgctcg agcgcgatca
      301 gcggttcggc gaaatggccg gctggctggc tgggctgcgg cagctcgccg aggggttcag
      361 ggagccgcgg cctgacgtcg ccgaggcgat cgacggcggc ctcgtcgcat tctgcacgcc
      421 gcatcgcgcc gccaggctcg tcgatctcgc cgggcgcgac gagcagggcc gcgtcgccgc
      481 cggacaaatc gtcgcggcgc tcggtccggg cgtcggtccg gcgctgctcg aggcgatcac
      541 cagacagacg cagggcgcca gggagatggg acgcgcggtc gtacagctgc tctgcgagca
      601 cgcgaagctc gtcgcgccgt cgctcgccgg cgcgctggcg gcggccgacc caccgctgca
      661 ccgcgtcatc gcgcgggtgc tcgggcacgc cggacccggc tacgaacctc cgctcggcac
      721 gctcctggcc agcgccgacg agcaggccgt ccgcgaagcc ttccgcagtc tcgcccgcat
      781 cgggacgccg cgcgcggccg cgctcgtcgc ggcgcaggtc gacaagggca aagggtggct
      841 cggcggcgcc gccgagcaga cgctctggca cttcccgcag cccgaggccg atcgccaggt
      901 gcgcgagctg ctcggccgcc gcacgttcgt gacgcggcat ccgcaggtcg cggcacggct
      961 gctcgagcgc gcggcgcaga acggcggcga cagcctcacg ccgatcctgc agacgctgac
     1021 gccgctgcgc tatcacttct ggagtccggc ggtcatgcgc gtcgcgcgcc aggccaggaa
     1081 tctgctcgcc caatgaaccg gcaatgatcg aagagcaccg cctcgacccc gtcgccctgc
     1141 tgaaagggct cgtcagcctc cgccgtctga ccggcctcta cccgcccggt catccatcga
     1201 tcgagcagaa gctgacggag ctcgacgaca acgtgcagcg gcacattcac gccgcggcgg
     1261 cgctgcggct cgacgtgatc cacggggccg cccacctcga cggcgtgccg ttccgccagg
     1321 acagcgaggc gcaggcgcag atcattcgcg agctgaccga cctcggcatc gacagcatcc
     1381 acatccagca cggcgtgtcg cgcgccgagc tcctggcgct ttccgagttc ctctggcaat
     1441 tgaaagaggc gcccgccggc gagcccatcg acgtcctgct cgcagcgcgc gagatcaggt
     1501 acatctcgct cggccgcctc gtgccgctcg acacgcgctg gaagaccgtg caatggcctg
     1561 acgccccaac cggcccgctc gatccctcgt acgagctgtc gctcgcgctc accgaacgca
     1621 ccttcgacga cgtgatgtcg gggagaggca tcgatctggc gacgatccgc gaaatcgtgc
     1681 acttgctcat ccagaaggtc gccgcgagca acgccgccct cggccagatc ctcgccgtca
     1741 agctgtatga aaacctgacc tattgccatt cggtgaacgt cgcgacgctc agtctcctca
     1801 tcggcaagca gctcgggttc gacgcgacgg cgacggcaac gctcgcggag gcggcgctgc
     1861 tccacgacat cggcaagacg cgcatcccgc tcgagatcct gaagaagccg agcgcgctcg
     1921 acaagcgcga gcgcaagatg atggaggcgc acacgaccta cggcgcggag atcctcgtcg
     1981 aggtcgacgg cctgcggccg ctcacgccga ccgtggcgct cgagcaccat cgcggcgtcg
     2041 acagcaccgg ctatccggat ctcggcgaag gcgcggtccc gcacttcctc agccagctcg
     2101 tggcggtggc cgacatctac gaggcgatga ccggcgcgcg gtcgtatcag gagccggcga
     2161 tgccggagca ggcgtgcctc gtcctggcgc gcctcgccgg cacgaagctc aataccgcgc
     2221 tcgtcaaggc attcgtcagc gccatcagct tcttcccgct cggctcggtc gtccgcaccg
     2281 atcgcgacga gctcggcgtc gtcgtgcgca cgaacgcgtc cgagccgctg catccggtga
     2341 ttgcactgat gggtgccgag ctcgagcgcc tgccgatcga gatcgacacc agcattcgct
     2401 cgactgccgg ccagtacgag cggcacgtcg tcgagacgct gcgcccgcag gaaggcctcg
     2461 acctcaatca gtacctcgcg gcctcatagt cgcgccacca gcgagcgtgc aatgggtcgg
     2521 ggtgacaacg tccgcggtca cgggtcgagc ggacggaagt tgacgtcgag gatctgcagc
     2581 cgctggaggt gcgtggcgag gcgcgatttg aagccctcgt agctgcgctg acgcgtcggc
     2641 gtccaggcga cttccgcgag cgcgatcatg cgcgggaacg ccatgtactc caccgctttc
     2701 ggattcggca gatactccgt ccagacctgc ccctgcacgc cgaggatgtg cgtcctggcg
     2761 ttctcctcga gctccgcagg catcggttcc caggtgtaga ccttgtcgag cggcaggaac
     2821 ccgccgatgg ccagcggctc cttgctcgtg tccttgacct ggtagtaatc gaagtaggtg
     2881 tgggacgtcg gcgtcagcac ggcgtcgtgc ccggtcttgg cggcggcgat cgccccgtcg
     2941 aggccgcgcc aactcatgac cgtcgcgttc tcggccaatc cgccttcgag gatctcgtcc
     3001 cagccgatca gacggcgccc cttcgacgtc aggaacgtat ccatctggcg gatgaaccag
     3061 ctttgcagct cttcttccgt cgtgacgccg agctccttca tgcgcgcctg aatg
//
LOCUS       DASSYW010001147         4479 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1814604, whole genome shotgun sequence.
ACCESSION   DASSYW010001147 DASSYW010000000
VERSION     DASSYW010001147.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4479)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4479)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4479
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1814604"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..663)
                     /locus_tag="VFN38_18075"
     CDS             complement(<1..663)
                     /locus_tag="VFN38_18075"
                     /inference="COORDINATES: protein motif:HMM:NF024581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HET9013740.1"
                     /translation="MNDSLPTIPDTCAIPGTPLSDARAGIDACVHCGFCLQACPTYLT
                     LEDENDSPRGRIVLMRALVDGSLPLDDADVRTHIDRCLGCRACETACPSGVPYGHLLE
                     ATRATLTDVTPNPPVARLILFVFARRALLRLAMLGGRLARATRLSWLLSRLPGRLGFA
                     MSMLESTRPAVKRRRYEATGDGARGTATLLTGCVMEGLFAGTNRATERVLTANGFAIV
                     ATD"
     gene            complement(660..1844)
                     /locus_tag="VFN38_18080"
     CDS             complement(660..1844)
                     /locus_tag="VFN38_18080"
                     /inference="COORDINATES: protein motif:HMM:NF013714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HET9013741.1"
                     /translation="MARRALHARGTDVVTAVAVSEATEAIAERVRSARAARTPLRIAG
                     RGHWLDAGRPCRAGETLALGADAGIVEYEPGDLTLTARAGTSLLDLARVTGAEGQWLP
                     LDPHGPSDGTIGATVATASAGPLSSAYGTPRDQVLGCELVTGTGDVVRAGGRVVKNVA
                     GFDLVRLNVGAWGSLGVISEVSVRLRALPEVDRTIAVEAGASEAWRWLRASEYTPLAG
                     ELVSADLAAILGIGSRATLLLRLGGNDALVRAATESAGELGFARDIPTSVWEALAGCE
                     PPASAVIRLATAPSRVAALWERAAAIVERAGGLSHATLPRGVVRCIIPVQGGDDEEIA
                     RLRGIVGALQTLAGAVVERLPALLWPALVPPAANDFLSAGVRNAFDPDRILNPGILGE
                     LA"
     gene            complement(1802..3256)
                     /locus_tag="VFN38_18085"
     CDS             complement(1802..3256)
                     /locus_tag="VFN38_18085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /protein_id="HET9013742.1"
                     /translation="MPTPALSHEEPALAKRLAAIVGASRVLVRAGELRAYESDGLPGY
                     HARPSIAVFPGTRDETIAVVRLLAELQVPFVPRGAGTGLSGGALADGVVLVGLHRLTR
                     IISIDADDARAVVEPGVVNATLTRAAAPIGLHYAPDPSSQTACTIGGNVAENAGGPHC
                     LKYGVTLNHVLGVTALLPGGEVVTLGQPDGESDGYDLLGAFIGSEGCFGIALDVTVRL
                     ARNPQAVRTLLADFGSVDAAAQAVSAIIASGIVPAAMEMMDAASIQAVEASIYAAGYP
                     TDAAAILLIELDGAAAGIDDDATRVAGFCRAAGARGVRTAADPAERARLWQGRKKAFG
                     AMGRISPHLVVQDAVVPRTRLPAVLAEIQRIGARYGVKVCNVFHAGDGNLHPNIGYDA
                     TSADESERVHLAMSAIMQACIDAGGTITGEHGVGLDKLPYMEALFSPATLGAMCALRE
                     VFDPARRSNPGKVVPVHSCREWHAAPSTRAGRTS"
     gene            complement(3261..4163)
                     /locus_tag="VFN38_18090"
     CDS             complement(3261..4163)
                     /locus_tag="VFN38_18090"
                     /inference="COORDINATES: protein motif:HMM:NF012981.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family protein"
                     /protein_id="HET9013743.1"
                     /translation="MTDIAVRIPAIVNVASGTADEARAALAESGAFDVHEVQPEAIAA
                     TVKELVADGARRVLVAGGDGTIATAAGALIGTPAELAVLPGGTLNHFARDLGISTVAA
                     EAVALASGDACRGVDVGVVNGRIFLNTSSVGAYVRFVRVRESLEKKFGYRIASAIAAF
                     RILFTLRLMAVEVVVDGRKRIYRTPLVFIGVGERGLQLPALGQRVKDGRRGLHVMVVR
                     GRSKARMLALGLSTVALGRDSVSRTPQFESFIVDDLRIDMNGMGTVAVDGEIVTLSAP
                     LQYELKRDALTVVCPPPESLLAAS"
     gene            complement(4274..>4479)
                     /locus_tag="VFN38_18095"
     CDS             complement(4274..>4479)
                     /locus_tag="VFN38_18095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sigma factor-like helix-turn-helix DNA-binding
                     protein"
                     /protein_id="HET9013744.1"
                     /translation="KYLTPRERKILFLYYGLDESGEPMTLEKIGALMGVTRERIRQIR
                     ERAFEKLRESPDGRALAGFWQAA"
BASE COUNT          642 a         1660 c         1631 g          546 t
ORIGIN      
        1 gtcggtggcg acgatggcga acccgttggc ggtcagcacg cgctcggtgg cgcggttcgt
       61 cccggcgaac aggccctcca tgacgcatcc cgtgagcagg gtggcggtgc cgcgcgcgcc
      121 gtcgcccgtc gcctcgtagc gccgccgctt caccgccggc cgcgtggact cgagcatgga
      181 catggcgaag ccgagccggc cgggaagccg cgacagcagc cacgacagcc gagtcgcgcg
      241 ggcgagccgc ccgccgagca tcgcgaggcg cagcagcgcc cgacgggcga acacgaagag
      301 gatcaaccgc gccaccggcg ggttgggcgt cacgtccgtg agcgtggcgc gcgtggcctc
      361 gagcaggtgg ccgtacggca cccccgacgg acaggcggtc tcgcaggcgc ggcagccaag
      421 acagcggtcg atgtgcgtcc ggacgtcggc atcgtccagc ggcaggctgc cgtccaccag
      481 cgcgcgcatc aggacgatgc ggccccgcgg gctgtcgttc tcgtcctcca gcgtgagata
      541 ggtgggacac gcctggagac agaagccgca gtgcacgcac gcgtcgatgc ccgcgcgcgc
      601 gtcggagagc ggcgtgccgg gaatggcgca ggtgtccggg atggtcggca gcgaatcgtt
      661 cacgcgagct ccccgagaat gccggggttg aggatgcggt cggggtcgaa ggcgttgcgg
      721 accccggcgg agaggaagtc gttggcggcc ggtggcacca gcgccggcca gagcagggcg
      781 ggcagccgtt ccaccaccgc gccggcaagg gtctgcagcg ccccgacgat accccgcagt
      841 cgcgcaatct cctcgtcgtc tccgccctgc acgggaatga tgcagcggac gacgccgcgc
      901 ggcagcgtgg cgtgcgacag gccgccggca cgctcgacga tggcggccgc gcgctcccac
      961 aacgcggcca cgcgcgacgg cgcggtcgcg agccggatca ccgccgacgc cggcggctcg
     1021 catcccgcga gcgcctccca taccgaggtg ggaatgtcgc gggcgaatcc cagctcgccc
     1081 gccgactccg tggcggcgcg caccagcgcg tcgttcccgc cgagccgcaa cagcagagtg
     1141 gcgcgcgatc cgatccccag gatggcggcg aggtcggccg acaccagctc gccggccagc
     1201 ggcgtgtatt ccgacgcgcg gagccatcgc cacgcctcgc tcgcgccggc ctccaccgcg
     1261 atcgtgcgat ccacttcggg aagggcgcgc agccgcacgc tcacctcgct gatcacgccg
     1321 agcgaccccc acgcccccac gttcagccgc acgagatcga agccggcgac gttcttcacc
     1381 acccgcccgc ccgcgcgcac gacgtcgccc gtgccggtga cgagctcgca gccgagcacc
     1441 tggtcgcgcg gcgtgccgta cgccgaggag agagggccgg cggaggccgt ggcgaccgtc
     1501 gcgccgatcg tcccgtcgga aggtccgtgc ggatcgagcg gcagccactg gccctccgcc
     1561 ccggtcacgc gggcgaggtc gagcagcgac gtgcccgcgc gcgcggtgag cgtgaggtcg
     1621 cccggctcgt actccacgat gcccgcgtcg gccccgaggg cgagcgtctc cccggcgcgg
     1681 caggggcggc cggcgtcgag ccagtggccc cggccggcga tgcgcaacgg cgtgcgcgcg
     1741 gcgcgggccg agcgcacccg ctcggcgatc gcctcggtgg cctcgctcac ggcgaccgcg
     1801 gtcacgacgt ccgtcccgcg cgcgtggagg gcgcggcgtg ccattcgcgg cagctgtgca
     1861 ccggcaccac cttgcccgga ttcgaccggc gcgccgggtc gaacacctcg cgcagcgcgc
     1921 acatcgcacc gagcgtcgcc ggcgagaaga gcgcctccat gtacggaagc ttgtcgaggc
     1981 ccaccccgtg ctcccccgtg atcgtgcccc ccgcgtcgat gcaggcctgc atgatggcgg
     2041 acatcgcgag atgcacccgt tccgactcgt cggcgctcgt ggcgtcgtag ccgatgttcg
     2101 gatgcaggtt gccgtcgccg gcgtggaaca cgttgcagac cttcaccccg tagcgagcgc
     2161 cgatgcgctg gatctcggcg aggacggccg gcagcctggt acggggcacc accgcgtcct
     2221 ggacgacgag atggggcgag atgcgcccca tggcgccgaa cgccttcttc cgtccctgcc
     2281 agaggcgcgc gcgctcggcc gggtcggcgg cggtccgcac gccgcgcgcg cccgcggcgc
     2341 ggcagaagcc ggcgacgcgc gtcgcgtcat cgtcgatgcc cgccgccgcg ccgtccagct
     2401 cgatgagcag gatcgcggcg gcgtcggtgg gatacccggc ggcgtagatg gaggcctcga
     2461 ccgcctggat ggaggcggcg tccatcatct ccatcgccgc cggcacgatc cccgacgcga
     2521 tgatcgccga caccgcctgc gccgcggcgt ccacggagcc gaagtcggcg agcagcgtgc
     2581 gcaccgcctg cggattgcgc gcgagacgca cggtcacgtc cagcgcgatg ccgaagcagc
     2641 cttcggaacc gatgaacgcg ccgagcagat cgtagccgtc gctctccccg tcgggctggc
     2701 ccagggtcac cacctcgccg ccgggcagca gtgccgtgac gccgaggacg tgattgagcg
     2761 tgacaccgta cttgaggcag tgcgggccgc cggcgttctc cgccacgttg ccgccgatcg
     2821 tgcacgcggt ctggctggag gggtcgggcg cgtagtgcag gccgatgggc gccgccgccc
     2881 gggtgagggt cgcgttcacg acgcccggct ccacgacggc gcgcgcgtcg tcggcgtcga
     2941 tggagatgat gcgcgtgagc cggtgcaggc cgaccagcac cacgccgtcg gcgagggccc
     3001 cgccggagag cccggtgccg gcgccacgcg gcacgaaggg cacctgcagc tcggcgagca
     3061 gccgcacgac ggcgatggtc tcgtcgcggg tgccggggaa gaccgcgatg gacgggcgcg
     3121 cgtggtagcc gggcaggccg tcggactcgt aggcgcgcag ctcgcccgcc cgcaccagca
     3181 cccgcgacgc cccgacgatg gccgcgagcc gcttcgcgag cgcgggctcc tcgtgggaca
     3241 gggcaggcgt cggcatcacg tcaggaggcg gcgaggaggc tctcgggggg agggcacacc
     3301 acggtgagcg catcgcgctt cagctcgtac tggagcggcg cggagagagt gacgatctcg
     3361 ccgtccaccg ccaccgtccc catcccgttc atgtcgatgc gcaggtcgtc cacgatgaag
     3421 ctctcgaact ggggggtgcg ggagaccgag tcgcggccga gggccaccgt cgacagcccg
     3481 agcgcgagca tgcgcgcctt cgaccggccg cgcaccacca tgacgtgcag gccgcgccgt
     3541 ccatccttca cgcgctgccc cagcgccgga agctggagcc cccgttcgcc cacgccgatg
     3601 aacaccagcg gcgtgcggta gatccgcttc cgcccgtcca ccaccacctc caccgccatg
     3661 agccgcagcg tgaagaggat gcggaacgcc gcgatcgcgg aggcgatccg gtagccgaac
     3721 ttcttctcga gcgactcccg cacgcgaacg aagcgcacgt aggcgcccac gctgctcgtg
     3781 ttgagaaaga tgcggccgtt caccacgccg acgtccacgc cgcgacaggc gtcgcccgag
     3841 gcgagcgcca ccgcctccgc ggcgacggtg ctgatgccga gatcgcgcgc gaagtggttc
     3901 agcgtgccgc ccggcaacac cgccagctcg gccggcgtcc cgatcagcgc ccccgcggcg
     3961 gtggcgatcg ttccgtcgcc cccggcgacg agaacgcgcc gggcgccgtc ggcgaccagc
     4021 tccttcacgg tggcggcgat cgcttccggc tgcacctcgt gcacgtcgaa cgcgccgctc
     4081 tcggcgagcg cggcgcgcgc ctcgtcggcg gtgccggagg ccacgttcac gatggcggga
     4141 atgcggactg caatgtcggt cacgggtcct cgacgcggga tgtcagcgga caatttactg
     4201 ccggacgaac gacgcggggc ggagagctca gctctccgcc ccgcgtccgc accccggtgc
     4261 cccgggaggt cgtctacgcc gcctgccaga agccggcgag cgcacgaccg tcgggagact
     4321 cccgcagctt ctcgaacgcg cgctcccgga tctgccggat gcgctcgcgc gtgacgccca
     4381 tcagcgcgcc gatcttctcg agcgtcatgg gctcgccgct ctcgtcgagg ccgtaataga
     4441 ggaacaggat cttccgctcc cggggggtga gatacttcc
//
LOCUS       DASSYW010001148         2027 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_27446, whole genome shotgun sequence.
ACCESSION   DASSYW010001148 DASSYW010000000
VERSION     DASSYW010001148.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2027)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2027
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_27446"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..536)
                     /locus_tag="VFN38_18100"
     CDS             complement(<1..536)
                     /locus_tag="VFN38_18100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013745.1"
                     /translation="MPDPSNLPARIDRAAVDRILARALELQADVAPDPQGQLTEAQLL
                     DLAKEVGLDPVNLRQAMAEERTRVAVPEEHGLLASLYGGSVASAQRTVRGTPAQVLKA
                     LDDWMQRQECLTVQRYFSSERIIWEARRDVVGMVRRTVSGRGYALQRTTDVAATAIAL
                     DDARVLVRLDARLAGYRSL"
     gene            complement(639..1784)
                     /locus_tag="VFN38_18105"
     CDS             complement(639..1784)
                     /locus_tag="VFN38_18105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013746.1"
                     /translation="MLRSAPRSRLAARLALSLLALAGACAGGVTPSPNPAPDPTGTPR
                     TTPSGPTPLVDAAWPVRSREHVDLWLHSYALLNPDTTLVPYFRRGYAERLSSLRRQRG
                     ASTQLDANRSTLLQRLAVNPSLATSGQFLPLYFESWDQMRQMIDLFIRAGGNPGASND
                     PTTRTYIALLAGAFPVGADREWLRLFTSSVDDESRRFYHDYWTTESRAHAGVMGRVDT
                     LWQRQWRPALTRFLNNTQQQSGELYLSLPLGGEGRTIHFGKQQNAVAVAFPDERDQAD
                     VVLYVFAHEVAGAVASAAIEDNTTPADRRSGTTSRYEQSAAVRAGAMLLEKTIPGVVP
                     GYMRYYLQQAGRTPPTDPRAMFTQVYALPDAVRDAITRQLEVILGGI"
BASE COUNT          292 a          681 c          770 g          284 t
ORIGIN      
        1 aggctgcgat agcccgccag ccgcgcgtcg agccgtacga gcacgcgcgc gtcgtcgagc
       61 gcgatggcgg tggcggcgac gtccgtcgtg cgctggaggg cgtagccccg gccgctcacg
      121 gtgcggcgca ccatccccac cacgtcgcgg cgcgcctccc agatgatgcg ctcggagctg
      181 aagtagcgct ggaccgtcag gcactcctgc cgctgcatcc agtcgtcgag cgccttgagc
      241 acctgcgccg gcgtgccgcg cacggtgcgc tgtgcgctcg cgaccgatcc gccatagagc
      301 gacgccagca gcccatgctc ctccggcacg gcgacgcgcg tgcgctcctc ggccatcgcc
      361 tggcggagat tcaccgggtc gagtccgacc tccttggcga ggtcgaggag ctgcgcctcg
      421 gtgagctggc cctgcggatc gggggcgacg tccgcctgca gctcgagcgc ccgcgccagg
      481 atgcggtcga ccgcggcgcg gtcgatccgg gcggggaggt tggacgggtc gggcatgaag
      541 gaaagatatc gtcgagcgca acgaaggacc tgcacgtgca ggtccttcgc cttcggctca
      601 ggacgacagg cgtcagcctc ggctcaggac gaccgccgtc aaattccgcc gaggatcacc
      661 tcgagctgcc gggtgatcgc gtcgcgcacg gcgtccggca gcgcgtacac ctgggtgaac
      721 atcgctcgcg ggtcggtcgg cggcgtgcgg cccgcctgct ggaggtagta ccgcatgtag
      781 ccggggacga cgccggggat cgtcttctcg agcagcatcg ccccggcgcg caccgcggcc
      841 gactgctcgt agcgcgaggt ggtgccgctg cggcggtcgg ccggcgtggt gttgtcctcg
      901 atcgccgcgc tcgccactgc gcccgccacc tcatgcgcga acacgtagag cacgacgtcc
      961 gcctggtccc gctcgtcggg gaacgccacg gcgacggcgt tctgctgctt tccgaagtgg
     1021 atcgtgcggc cctcgccgcc gagggggagc gagaggtaga gctcaccgct ctgctgctgg
     1081 gtgttgttga ggaagcgcgt gagggccggc cgccactggc gctgccacag ggtgtccacg
     1141 cggcccatca cgccggcgtg cgcgcgcgac tcggtcgtcc agtagtcgtg gtagaagcga
     1201 cggctctcgt cgtcgacgct cgaggtgaag agccgcagcc attcacgatc ggccccgacg
     1261 ggaaaggcac cggcgagcag cgcgatgtag gtgcgggtgg tgggatcgtt ggacgcgccc
     1321 ggattcccac ccgcgcggat gaacaggtcg atcatctgcc gcatctggtc ccacgactcg
     1381 aagtagagcg gcaggaactg gccgctcgtc gccagcgagg ggttgacggc gagccgctgg
     1441 agcagcgtgc tccgattggc gtcgagctgc gtcgacgcgc cgcgctgtcg ccgcagcgac
     1501 gaaagccgct cggcgtagcc gcggcgaaag tacgggacca gtgtggtgtc ggggttcagc
     1561 agggcgtagc tgtgcagcca gagatcgacg tgctcgcgcg agcgcaccgg ccacgccgcg
     1621 tccaccagcg gcgtcggacc gctcggcgtg gtgcgcggcg tgccggtggg atcgggcgcc
     1681 ggattgggtg agggggtgac gccgccggca caggcgccgg cgagtgcgag cagggacagc
     1741 gcgaggcgcg cggcgagtcg ggagcgcggg gcggagcgga gcatgggagc cgggtcgaag
     1801 tacgggtgac ctgccatcga ccgggactgt cgcaagcgac gcgccgacgc gcgccgcgat
     1861 cgctcagaga tcgcccgccg ccctcccgca ggtgacgcag aacttccacc ctcgctccag
     1921 ctcgctgccg caggcgggac agtgcacgat cgtgaggtcc tggccgcaat gcggacagaa
     1981 gctgatggcg cggccggtgg gcagctcgcc gttgcagaag gtgcact
//
LOCUS       DASSYW010001149         2002 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_425017, whole genome shotgun sequence.
ACCESSION   DASSYW010001149 DASSYW010000000
VERSION     DASSYW010001149.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2002)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2002)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2002
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_425017"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..358)
                     /locus_tag="VFN38_18110"
     CDS             complement(<1..358)
                     /locus_tag="VFN38_18110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013747.1"
                     /translation="MRSLRGAVVLGGVLLLACGGDKGAAAPAREHASTNTAGAPEGPG
                     SAPAAGTPDGRRTVLFLGTSLTAGYGLDADSAFPQQLQRKIDAAGLPYQTVNAGVSGE
                     TSAGLLRRLDWVLQRPA"
     gene            357..1067
                     /locus_tag="VFN38_18115"
     CDS             357..1067
                     /locus_tag="VFN38_18115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HET9013748.1"
                     /translation="MLEARQLTKEYRSGDHTLAVLRDVSFTIPDGAFVAVVGPSGSGK
                     TTLLGLLAGLDVPTTGSVHLDGADLTRLSEDKRAQLRGAKVGFVFQSFQLIPTLTALE
                     NVQVPLELRGDDGAPARARELLARVGLGDRVEHFPNQLSGGEQQRVAIARAFSNSPRL
                     LFADEPTGNLDSETGERIIELLLTLNRESGTTIVLVTHDLALARRAQRIIRLADGVVV
                     SDAPTDVALRPVVSSVAG"
     gene            1076..>2002
                     /locus_tag="VFN38_18120"
     CDS             1076..>2002
                     /locus_tag="VFN38_18120"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HET9013749.1"
                     /translation="MHTGQLLGLAWKESRTARRRLLLYMSSISLGVAALVAIDSFASN
                     TQRSVREQARALLGGDISLSSRQPFPAPLVRALDSLQAEGVGLTEVTTFTSMALVERT
                     GGTRLSQIRAVTPGYPFYGEILTEPAGQWARLQSGRYALVDPALLLAVDGHVGDTLAL
                     GFARFIVIGTLTSVPGDVGVSSAIGPRVYIPAKYVDETSLLLFGSRSDREMLLKLPPT
                     LTPQRFLARFRARLEADRVRARTVAETEFNLTEAIEQLRDFLSVIGLVALLLGGIGVA
                     SGVNAFVMRKIDTVAILRCLGATSRQVLAIYLI"
BASE COUNT          270 a          783 c          653 g          296 t
ORIGIN      
        1 ccgcgggccg ttgcagcacc cagtccaggc gccgaagcag cccggccgag gtctccccgc
       61 tcacccccgc gttcaccgtc tggtacggaa gccccgcagc gtcgatcttg cgctggagct
      121 gctgcggaaa ggcactgtcg gcatcgagtc cgtagccggc cgtgagcgag gtgccaagga
      181 agagcacggt cctccgaccg tccggcgtcc cggccgccgg cgctgatccg ggaccttcgg
      241 gcgcacccgc ggtgttggtc gaggcgtgct cgcgggccgg cgccgccgcg cccttgtcgc
      301 cgccgcacgc cagcagcagc acgccgccca gcaccaccgc ccctctcaga gatctcatgc
      361 tcgaagcccg ccagttgacg aaggaatacc ggagcggcga ccacaccctc gccgtgctgc
      421 gcgacgtgag cttcaccatc cccgacggcg cgttcgtcgc cgtcgtcggg ccatcgggga
      481 gcggcaagac caccttgctc gggctcctcg ccggcctcga cgtgccgacg accggcagcg
      541 tccacctcga cggcgccgac ctcacccgcc tctcggaaga taagagggcc cagctgcgcg
      601 gtgccaaggt ggggttcgtg ttccagagct tccagctcat ccccaccctc accgccctgg
      661 agaacgtgca ggtgccgctg gagctgcgcg gcgacgacgg cgcccccgcg cgcgcccgcg
      721 agctgctcgc ccgcgtgggc ctcggcgatc gcgtcgagca ctttcccaac cagctctccg
      781 gcggcgagca gcagcgcgtc gccatcgccc gcgccttcag caactcgccc cgcctgctct
      841 tcgccgacga gcccacggga aacctcgaca gcgagacggg agagcgcatc atcgagctcc
      901 tgctcaccct caatcgcgag tcgggcacga cgatcgtcct cgtcacccac gacctcgccc
      961 tcgcccggcg cgcgcagcgc atcatccgcc tcgccgacgg ggtcgtcgtg agcgacgccc
     1021 ccaccgacgt cgcgctgcgg ccggtcgtct cgtcggtcgc gggctgacca ccaccatgca
     1081 caccggtcaa ctgctcggcc tggcgtggaa ggagagccgc acggcacgtc ggcgcctgct
     1141 cctctacatg tcgtccatct cgctgggcgt cgctgcgctc gtcgccatcg attcgttcgc
     1201 gagcaacacg cagcgcagcg tgcgcgagca ggcgcgcgca ctcctcggcg gcgacatctc
     1261 gctctcctcg cgccagccct tccccgcccc gctggtccgc gccctcgact cgctgcaggc
     1321 ggagggggtg ggcctcaccg aggtgacgac cttcacctcg atggcgctcg tggagcgcac
     1381 cggcggcacc aggctctcgc agatccgcgc cgtgacgccc ggctatccgt tctatggcga
     1441 gatcctcacc gagcccgccg gccagtgggc gcggctccag tcgggccgct acgcactcgt
     1501 ggacccggcg ctgctgctcg ccgtcgacgg ccatgtcggc gacaccctgg cgctcgggtt
     1561 cgcgcggttc atcgtcatcg gcacgctcac cagcgtgccc ggcgacgtgg gagtgtcgtc
     1621 ggccatcgga ccgcgcgtgt acatcccggc gaagtacgtc gacgagacgt cgctgctcct
     1681 gttcggcagc cggtccgacc gcgagatgct gctgaagctt ccgcccactc tcacgccgca
     1741 gcggttcctc gcgcgcttcc gcgcgcggct ggaggcggac cgggtgcgcg cgcgcaccgt
     1801 ggccgagacg gagttcaacc tcaccgaggc gatcgagcag ctccgcgact tcctcagcgt
     1861 catcggcctc gtggccctgc tgctcggcgg catcggggtg gccagcggcg tgaacgcctt
     1921 cgtgatgcgg aagatcgaca ccgtggcgat cctgcgctgc ctgggtgcga cgagccgcca
     1981 ggtgctggcg atctacctca tc
//
LOCUS       DASSYW010001150         2662 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1394950, whole genome shotgun sequence.
ACCESSION   DASSYW010001150 DASSYW010000000
VERSION     DASSYW010001150.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2662)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2662)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2662
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1394950"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..844
                     /locus_tag="VFN38_18125"
     CDS             <1..844
                     /locus_tag="VFN38_18125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013750.1"
                     /translation="APVKQQTSLAGKPTVLFLLFGDHNDPRILPVATIGHGRISPISL
                     DAEGWRKFDALYFKKGAEMAVYRRGAALGNAVVRRGMWDGDEPLYKLPGCRALRPLAA
                     ATLAAAPPDVVTLELIGTSDALPAAPSRADVGPAMTDSAREVSARVAGREGLSATDRA
                     DLELTVSAFNTGATGRPTLVGSYSERGGGGGASARHVFVLADSTAKGYDATFVHTAKD
                     SVPEFRRLIDHVDLTGDGVDEIVLEGWRAGGDTYLVVMKYDAGRWHEVARGDNTWCAD
                     PPRK"
     gene            complement(861..1139)
                     /locus_tag="VFN38_18130"
     CDS             complement(861..1139)
                     /locus_tag="VFN38_18130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC ligand binding domain-containing
                     protein"
                     /protein_id="HET9013751.1"
                     /translation="MITTIVLIRAEPASIPAAAQYLAEIEGVTDVYSVSGEWDLVAIV
                     KVAEYDQIAKVVTEHFPKVPGLQRTQTLTAFRAYSRKDLQQAWDIGVE"
     gene            complement(1150..1650)
                     /locus_tag="VFN38_18135"
     CDS             complement(1150..1650)
                     /locus_tag="VFN38_18135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013752.1"
                     /translation="MNIAVQLEPSNGTPPAVEFRWDTDTDILTARLEAPEDGVGPSGA
                     LELEGADGAWLILDVVKGRILGLEVAVWPEVQKRPTLATPSTVEDARVLVPLRASQPG
                     AVLLEVETSLLAEADEAERTIHFRVGVKRDVRTIRLGRDLLLDVDPQSRIAGLWLLNV
                     PPFPST"
     gene            1927..>2662
                     /locus_tag="VFN38_18140"
     CDS             1927..>2662
                     /locus_tag="VFN38_18140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013753.1"
                     /translation="MTRGQNAVHVMPLDWSAAERVLATLIDRIDPARADTQLLVVTSD
                     AESAAAAADALVHAAGDRPVRIVAATASPRASRLLKAGPSHVVTGAPAELVALLQGSA
                     LKPESVRGVLFAWLDPILGTPEAAPLETLLGELPKEGARVVLATELTPAFEALIERYA
                     RRARRAVETPPEAGATPVNVEYVTTAGTARAATLRRLLDALDLPRAVLYARTEAARHE
                     SLRVARALGYPADAVRLSDEGGETAAG"
BASE COUNT          372 a          980 c          943 g          367 t
ORIGIN      
        1 ggcgccggtg aagcagcaga ccagcctcgc cggcaagccg accgtcctgt tccttctctt
       61 cggcgaccac aacgatcccc gcatccttcc ggtggcgacc atcggtcatg gtcgcatctc
      121 cccgatctcg ctggacgccg aggggtggcg gaagttcgat gcgctctact tcaagaaggg
      181 cgcggagatg gcggtctatc gtcgaggcgc ggcgctcggc aacgcggtcg tgcggcgtgg
      241 gatgtgggac ggagacgagc cgctctacaa gctgccggga tgccgagccc tgcgtcccct
      301 ggccgccgcc acgctcgccg ccgccccacc tgacgtggtg acgctggagc tgatcggcac
      361 gagcgacgcg ctgcccgccg caccctcgcg ggcggacgtg ggccccgcca tgaccgacag
      421 cgcgcgcgaa gtctcggcgc gcgtggctgg ccgagaaggt ctctccgcca ccgatcgcgc
      481 cgacctggag ctgacggtct cggcgttcaa caccggcgcg accggccggc ccacgctcgt
      541 ggggtcctac tccgaacgcg gcggcggtgg cggcgcgagc gcccggcatg tgttcgtgct
      601 ggccgactcc accgccaagg gctacgacgc caccttcgtg cacacggcca aggactcggt
      661 gccggagttc cgtcgcctga tcgaccacgt ggacctcacg ggcgacggcg tggacgagat
      721 cgtgctcgaa ggctggcgcg ctggtggcga cacctacctc gtcgtgatga agtacgacgc
      781 cggccgctgg cacgaggtcg cgcgtggcga caacacctgg tgcgcggacc cgcccaggaa
      841 gtagcgctgg aaacggcgcg ctactcgacg ccgatgtccc acgcctgctg gagatccttc
      901 ctggagtagg ccctgaacgc cgtgagcgtc tgcgtgcgct gcagccccgg caccttggga
      961 aagtgctccg tcaccacctt cgcgatctgg tcgtactcgg ccaccttcac gatcgccacg
     1021 agatcccact cgccgctcac ggaatagacg tcggtgacgc cctcgatctc ggcgaggtac
     1081 tgcgccgcgg cggggatgga ggccggctcg gcccgaatca gaacgatcgt cgtgatcacg
     1141 gcgcggtggt caggtggagg gaaagggcgg tacgttcagc agccagagcc ccgcgatgcg
     1201 gctctgcgga tccacgtcga gcaggaggtc ccggccaagc cggatcgtcc ggacgtcgcg
     1261 cttcacgccc acgcggaagt ggatcgtccg ctccgcctcg tccgcctcgg cgagcagcga
     1321 cgtctccacc tcgagcagca ccgcgcccgg ctgcgatgcc cgcagcggca cgagcacgcg
     1381 ggcgtcttcc acggtcgatg gggtcgcgag cgtcggacgc ttctggacct ccggccacac
     1441 ggcgacctcg agccccagga tacgcccctt cacgacgtcg aggatgagcc acgcaccgtc
     1501 ggctccctcc agctccagcg cgcccgatgg acccacgcca tcctccggcg cctccagccg
     1561 cgccgtgagg atgtcggtgt cggtgtccca ccggaactcc acggcgggtg gcgtgccgtt
     1621 ggaaggctcc agctgcacgg cgatgttcac gcggctcctc gctcgtccac ggcccaaggg
     1681 tgcggcggcg catgtcgcgg gcgtcgccct tctgccgcgg gtcggcgcga acgaattcgc
     1741 gtccgtcgcc gacggcgggg agagatatac cgagcgggtc gccgccgaga caggggggcg
     1801 ttcggtggcc cggaatgcgg cgtccggcta gctttcgggg acgtttgaca acttggcggc
     1861 gcgcgtgggc gcgcccggac cggagcgggg gattccgtgg agaatgaggc gaaggagccg
     1921 acgggtgtga cccgcgggca gaatgcggtg cacgtcatgc cgctcgactg gtcggccgcc
     1981 gagcgcgtcc tggccacgct gatcgaccgg atcgatccgg cgcgcgccga cacccagctg
     2041 ctcgtcgtca cctccgacgc cgaaagcgcc gccgccgctg ccgacgccct cgtgcacgcg
     2101 gccggcgatc gcccggtgcg catcgtcgcc gccaccgcga gcccacgggc ctcgagactg
     2161 ctcaaggccg ggccgtcgca cgtggtcacc ggcgcgcccg cggagctcgt cgccctcctc
     2221 cagggctcgg cgctcaagcc cgagagcgtg cgcggcgtgc tcttcgcctg gctcgatccc
     2281 atcctcggca cacccgaggc cgcaccgctc gagaccctgc tcggcgagct gccaaaggag
     2341 ggcgcccgcg tcgtgctggc caccgagctc acgcccgcgt tcgaggcgct gatcgagcgc
     2401 tacgcgcgcc gcgcacgccg tgcggtggag acgccgcccg aggccggcgc cacccccgtg
     2461 aacgtggagt acgtgacgac ggccggcacg gcgcgcgccg ccacgctgcg tcggctgctc
     2521 gacgcgctcg acctgccccg cgcggtcctg tatgcgcgca ccgaggccgc gcggcacgag
     2581 tcgctgcgcg tggcgcgcgc gctcggctat ccggccgacg ccgtgcgcct gagcgacgag
     2641 ggaggcgaga ccgccgccgg cg
//
LOCUS       DASSYW010001151         2438 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_893447, whole genome shotgun sequence.
ACCESSION   DASSYW010001151 DASSYW010000000
VERSION     DASSYW010001151.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2438)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2438)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2438
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_893447"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1279
                     /locus_tag="VFN38_18145"
     CDS             <1..1279
                     /locus_tag="VFN38_18145"
                     /EC_number="3.4.13.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070573 - metallodipeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="dipeptidase"
                     /protein_id="HET9013754.1"
                     /translation="QATAPAAPISAATPRDMARALRVLRTAPVFDGHNDLPWRIREDS
                     IHPRDVEAYDLRTRTPGMTDLARLKAGHVGAQFWSVYLPGERNDGTYAANGAVSSAPG
                     YARVQLEQIDIARRVIARYPALRWTPTAAATRAAMKEGRVASLLGMEGGHAIENSLEA
                     LRQYYELGARYMTLTHNVTLDWADAALDSARHGGLTPFGREVVREMNRLGMLVDLSHV
                     SPGTMSDALDVAEAPVIFSHSAARALVDHPRNVPDSILARMPRNGGVVMVPFVTAFVS
                     RAVKAHDDSLESAVRTAIARHGRDSVAVRAELAAWRASHPRPRATIADVADHVEHVRR
                     IAGVDHVGIGSDFDGISENVVGLEDVSTFPNLLAELAHRGWSDADLAKLTSGNVLRVL
                     ADAERAAARLKKVRGPSQGTIEQLDRAPGHAVP"
     gene            1353..>2438
                     /locus_tag="VFN38_18150"
     CDS             1353..>2438
                     /locus_tag="VFN38_18150"
                     /inference="COORDINATES: protein motif:HMM:NF012722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HET9013755.1"
                     /translation="MPDSYDLLAESIERVIRSDLRPTSVEQLAGSIDRTMSEEARAGA
                     LRLAWLRVLLVTPVVALSLASLGRRDGAWPVASRLLPAIVSLSWLLAAGVLVLVLRAG
                     WYRRWLPHLMPGLDAVAICAVFVVPSYLGTGAGRTMSADALACLVGLSGFLSVSGALQ
                     LSRSSSRSGTALAVVVFLLAAFTTRLDPLATLTIATMLVGTGLLSASAATMIRRLVTD
                     EVAKSTLSHMYQEAAQTIDAREQVLKIVSHDLRNPLHTIAMCADVMLDVALPAEKQTE
                     NLRRIKRAGERMNRLVQDLLDVAKLEAGRVAINARPLDVAPLLREAHEMLLPLAAEKA
                     IALDLDVADALPQVTADAGRVLQVFSNL"
BASE COUNT          341 a          875 c          865 g          357 t
ORIGIN      
        1 ccaggccacc gcgcccgcgg cgccgatcag cgccgccacc ccgcgcgaca tggcgcgggc
       61 gctgcgcgtg cttcgcaccg cgccggtgtt cgacgggcac aacgacctgc cgtggcggat
      121 tcgcgaggac agcatccatc cgcgcgacgt ggaagcctac gatctccgca cccgcacgcc
      181 cgggatgacc gacctggcac gactcaaggc gggtcacgtg ggggcccagt tctggtcggt
      241 ctacctgccc ggcgaacgga acgacggcac gtatgccgcc aacggtgccg tctcgagcgc
      301 gcccggttac gcgcgcgtgc agctcgagca gatcgacatc gcgcggcgcg tgatcgcgcg
      361 atatcccgca ctgcggtgga cgccgaccgc ggcggccacg cgcgcggcga tgaaggaggg
      421 ccgcgtcgcc tcgctcctcg ggatggaagg gggacacgcg atcgagaact cgctcgaggc
      481 gctccggcag tactacgagc tgggcgcccg atacatgacg ttgacgcaca acgtcacgct
      541 cgactgggcc gacgccgcgc tcgacagcgc caggcacgga gggctgacgc cgttcggtcg
      601 cgaggtcgtg cgcgagatga accgcctcgg gatgctggtc gatctgtcgc acgtctctcc
      661 cggcacgatg agcgacgcgc tggacgtggc ggaggcgcca gtgatcttct cccactcggc
      721 ggcgcgcgcc ctcgtcgacc atccgcgcaa cgtgcccgat tcgatcctcg cccgcatgcc
      781 gaggaacggc ggggtcgtga tggtgccgtt cgtgacggcg ttcgtgtcgc gcgcggtgaa
      841 ggcgcacgac gattccctcg aatccgccgt tcggacggcg atcgcgcggc acggccgcga
      901 cagcgtggcc gtgcgtgccg agctcgcggc gtggcgcgca tcgcatccgc gtccgcgggc
      961 gacgatcgcc gacgtcgccg accacgtgga gcacgtgcgc aggatcgccg gggtggacca
     1021 cgtcggcatc ggcagcgact tcgacgggat cagcgagaac gtggtgggac tggaagacgt
     1081 ttcgacgttc cccaacctgc tggccgagct ggcgcaccgc gggtggagcg atgccgacct
     1141 cgcgaagctg acgagtggca acgtgctccg cgtgctggcg gacgcggagc gcgcggcggc
     1201 gcgactcaag aaggtgcgcg ggccctccca gggcacgatc gaacagctgg accgcgcacc
     1261 ggggcacgcc gtcccctagg ccgaccggtc gggcgcggcg ttgtggaagc cgtggggctc
     1321 gtgcatgttg agcgcgagct tcgcggattg agatgccaga ctcctacgat ctgctcgccg
     1381 agtcgatcga acgcgtcatt cgctcggacc tgcggccgac gtccgtggag cagctcgccg
     1441 gctccatcga ccgcacgatg agcgaggagg cgcgcgcggg agcgctgcgc ctcgcctggc
     1501 tgcgcgtcct gctcgtcacg ccggtggtgg cgctttcgct ggcgtcactc ggccggcgcg
     1561 acggcgcctg gcccgtggcg agccgactcc tgccggcgat cgtgagcctg tcctggctcc
     1621 tcgccgcggg agtgctggta ctggtgctcc gcgcgggctg gtatcgccgg tggctgcccc
     1681 acctcatgcc gggactggat gccgtcgcca tctgcgcggt gttcgtcgtc ccttcctatc
     1741 tcggcacggg ggccggccgc acgatgtcgg cggacgccct cgcctgcctc gtcggcctgt
     1801 ccggcttcct gagcgtctcg ggcgccctcc agctctcgcg ctcgtcgtcg cggagcggga
     1861 cggcgctcgc cgtcgtcgtc tttctcctcg ccgcgttcac cacgcgcctc gacccgctcg
     1921 cgaccctcac catcgccacg atgcttgtcg ggaccgggct gttgagcgcg agcgcggcaa
     1981 cgatgatccg ccggctcgtc accgacgaag tggccaagtc gacgctctcg cacatgtacc
     2041 aggaggcggc gcagacgatc gacgcgcgcg agcaggtgct gaagatcgtg tcgcacgacc
     2101 tgcgcaaccc gctgcacacg atcgcgatgt gcgccgacgt catgctcgac gtggcgctgc
     2161 ccgccgaaaa gcagacggag aatctgcggc gcatcaagcg cgcgggcgaa cgcatgaacc
     2221 ggctcgtgca ggacctgctc gacgtcgcca agctcgaggc gggacgcgtc gcgatcaacg
     2281 cgcggccgct cgacgtcgcg cccctcctgc gcgaggcgca cgagatgctc ctgccgctcg
     2341 ccgccgagaa ggcgatcgcc ctcgacctcg acgtggccga cgcgctgccg caggtgaccg
     2401 ccgacgccgg acgcgtgctc caggtcttct cgaacctc
//
LOCUS       DASSYW010001152         2729 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_307919, whole genome shotgun sequence.
ACCESSION   DASSYW010001152 DASSYW010000000
VERSION     DASSYW010001152.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2729)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2729)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2729
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_307919"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..248
                     /locus_tag="VFN38_18155"
     CDS             <1..248
                     /locus_tag="VFN38_18155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013756.1"
                     /translation="TLLCATHDIASTRSFDRVLVLDRGRIVEDDTPGALERRQDSQYA
                     RLLKSSAAPSDAFTSWTRLRLDGAQIGEAAAVRAVDA"
     gene            241..2391
                     /locus_tag="VFN38_18160"
     CDS             241..2391
                     /locus_tag="VFN38_18160"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HET9013757.1"
                     /translation="MPDVHACSWPITRLTEGVAALASATGLEPRAVPHMPASLLTDSV
                     DRRIEALGAALSIGVTRVRCGLSDLDEFLQSSAPSIVRLPAPDDSEFLLLLGSARDVI
                     WVLDRDLGRRAVRRAELRALLCRHAEAPLAESISRLLDGAGLNGKRRSQAVDAMLRQQ
                     LRGRCTGLWTVHSRPTTGFLRLAGRSRLGWHLAGFLVCHVTQYCLLLASWWLIGAAAL
                     QGRIDFGWLQAWGLLLLTRIPLLALGSWYQGVVAARAGSLLKQRLLEGTFQLAPEDVR
                     RDGVGHTLSRVMESEVMETLALGGGFLALVAVVELVAAAVVLAYGAGGALHVLGLALW
                     TGMACVLGASFWRHRRRWTASRLALTRSSIELMIGHRTRLVQRSGTLESEAEGSALAE
                     YHQVSEAMDRAAAKLVALVPRGWLLAGLLILAPSFVGGMGSTVGLAVGLGGILLAYRA
                     LERGVAGFALLADAAVAWREAAAVFQAGGHEEPPGDPVSLAAIDADPITPPSGWADRA
                     ATLLEAHGLAFDYPGGARRVLRDCSFRIDVGDRVLLEATSGAGSSALVSIVGGLRRQD
                     AGVLLLDGLDRRTLGADAWARLVSTVAQPHENHVFTNTLAFNLLMGRRWPPEPEDLQD
                     AEAVCRELGLGPLVQRMPGGLHQVVGDTGWQLSQGERARLFIGRALLQGARLVTIDAA
                     LSSLDAESLEQVLRCVASRAPSVLVTTLAGDDRP"
     gene            2460..>2729
                     /locus_tag="VFN38_18165"
     CDS             2460..>2729
                     /locus_tag="VFN38_18165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013758.1"
                     /translation="MATPAFGMQMRGGTRTDAAAVATSCRARTVALPPAPTQYTIELR
                     APAGVAGAGSGRVLLRWAPSPFGVSVSPDGHLVYDLSLVLRDLPAP"
BASE COUNT          357 a          919 c          966 g          487 t
ORIGIN      
        1 ggacgctgct ctgcgccacc catgacatcg cgtcgacacg ctcgttcgac cgcgtgctgg
       61 tcttggatcg cggtcgcatc gtggaggacg acaccccagg cgccctcgag cgccgccagg
      121 attcgcagta cgcgcggctc ctgaagtcga gtgccgcgcc gtccgacgcg ttcacgtcct
      181 ggacacgact gcgactcgac ggagcgcaga tcggtgaagc cgccgccgtg cgcgccgtcg
      241 atgcctgacg ttcacgcctg ctcgtggccc atcactcgac tcacggaagg agtcgccgcc
      301 ctcgcgtccg ccaccggcct cgagccgcgg gcggtgccgc acatgccggc gtcgctgctc
      361 acggacagtg tcgatcgccg gatcgaagcg cttggggcgg cgctctccat cggagtcact
      421 cgcgtgcgct gtggcctgag cgacctggac gagttcctcc aatcttccgc gccgtccatc
      481 gttcgacttc ccgcgccgga cgacagcgag tttctccttc tcctggggag tgcgcgcgac
      541 gtgatctggg tactcgatcg cgatctcggt cggcgcgctg tgcgaagggc cgagctgcgt
      601 gcactcctct gccgccacgc cgaggcgcca ctcgccgagt cgatctctcg gttgctcgac
      661 ggagctggcc tcaacggcaa gcggcgttct caggccgtcg acgcgatgct tcggcagcag
      721 ctgcgcggga gatgcacggg cctgtggaca gtgcattctc gtcccaccac aggattcttg
      781 cgcctggcgg ggcgatcacg tctcggctgg cacctcgccg gcttcctcgt ctgccacgtc
      841 acacagtact gcctgctgct ggcgtcctgg tggctcatcg gcgccgctgc gctccagggc
      901 cggatcgact tcgggtggct ccaggcgtgg ggtctgctcc tcctcaccag gatcccgctc
      961 ctcgctctcg gctcatggta tcaaggcgtc gtcgcggcgc gcgcgggaag cctgctcaag
     1021 caacggctgc tcgagggcac ctttcagctc gctcccgagg acgttcggcg ggacggcgtg
     1081 gggcacacgc tgagccgcgt gatggagtcg gaggtgatgg agacgctggc gctgggcggc
     1141 gggttcctcg cgctcgttgc cgtcgtggag ctcgtggccg cggccgtcgt ccttgcgtac
     1201 ggcgccggtg gcgccctgca cgtgctgggt ctcgcgctct ggactggcat ggcgtgcgtg
     1261 ctgggcgcga gcttctggcg acaccgaaga cgatggaccg cgtcgcgact cgccctcacg
     1321 cggagctcga tcgaactgat gatcggtcat cggacgcgcc tcgtgcaacg gtcgggcacg
     1381 ctcgaatccg aagcggaagg cagtgcgctc gcggagtatc accaggtctc cgaagccatg
     1441 gatcgcgccg cggcgaagct cgttgcgctg gttccgagag ggtggctgct ggcgggactg
     1501 ctgatcctcg ctccgtcgtt cgtcggaggc atgggcagca cggtgggact cgcggtgggc
     1561 cttggaggga tcctgttggc gtatcgcgcc ctcgaacggg gtgtcgccgg ctttgcgctg
     1621 ctggctgacg cggctgtcgc atggcgcgag gccgccgcgg tgttccaggc gggcggccac
     1681 gaagagcctc ccggggatcc ggtctcgttg gcggcgatcg acgccgaccc catcacgccg
     1741 ccttccggct gggctgatcg agcggcgact ttgctcgagg cgcatgggct ggcattcgac
     1801 tatccaggcg gcgcccgacg cgtgctccgc gactgcagct tccggatcga cgtcggggac
     1861 cgggtgctcc tcgaagcgac atccggtgcg ggaagctcgg cgctcgtctc gatcgtcggc
     1921 ggcctcagac ggcaggacgc cggcgtcctg ctcctcgatg gtctggatcg ccgcacgttg
     1981 ggtgcggatg cgtgggcccg actcgtgtcg acggtcgcac agccgcatga gaatcacgtc
     2041 ttcacgaaca cgctcgcgtt caacctgttg atgggacggc gctggcctcc ggagccggaa
     2101 gacttgcagg acgccgaggc ggtatgtcgg gagctgggcc tcggaccgtt ggtgcagcgc
     2161 atgcctggcg gcttgcatca ggtggtgggc gacacgggat ggcaactttc gcaaggagag
     2221 cgcgcccggc tcttcatcgg gagggcgctg ttgcagggtg ccagactcgt gacgatcgac
     2281 gcggcactct ccagcctcga cgccgagtcc ctcgagcagg tgttgcgctg cgtcgccagc
     2341 cgtgcgccga gcgtgctggt gactaccctc gccggtgatg acaggccatg acgtccattg
     2401 gaacaaggcg cgccgacttg agatttcgct gcggcgtggt gacgtgtgtg accgcgctga
     2461 tggcgacgcc agcgttcggc atgcagatgc gcggcggcac gcgcacggac gcggcggcgg
     2521 tggcgacgag ctgtcgtgca cgcacggtcg cccttccacc ggcgcccacc cagtacacca
     2581 tcgagctcag ggcgccggcc ggtgtcgcag gcgctggaag tggacgcgtg ctcctgagat
     2641 gggcgccctc tcccttcggg gtcagcgtct cccccgacgg acatctcgtg tacgacctct
     2701 cgcttgtcct gagggatctt cccgcgccc
//
LOCUS       DASSYW010001153         2870 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_823868, whole genome shotgun sequence.
ACCESSION   DASSYW010001153 DASSYW010000000
VERSION     DASSYW010001153.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2870)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2870)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2870
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_823868"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..966
                     /locus_tag="VFN38_18170"
     CDS             <1..966
                     /locus_tag="VFN38_18170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013759.1"
                     /translation="RWDDRNLDMFFSPNELTPIAYVGSCCAGTAPGVIDADLKAPYTA
                     EFFIGAEHRMGAWRMRMTGVDRRERNLAALVNTGVPLSEYVTLDVGDSGIDVDGNTTA
                     QTLRLYGRTPAMFGRDRYTLMNPDGLTALYQGVDITVDRDLFRRWFFRFGGSAYRIKS
                     TGANRGFLSSENDHGLLGEAFLWPNALTSAEGRSYFDRAFVIKLSGSYRAPGDVRIGM
                     VARYQDGLPFSRMVLTDAFYQGRDLVMAIPRGAQRFTYMFTLDAKIEKDVSFGRRQVG
                     VILEAYNLTNATIEAEEYVVTGHEFRRVSAVQPPLALRVGLRVGF"
     gene            983..1486
                     /locus_tag="VFN38_18175"
     CDS             983..1486
                     /locus_tag="VFN38_18175"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016102133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004602 - glutathione peroxidase activity
                     [Evidence IEA];
                     GO_function: GO:0043295 - glutathione binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione peroxidase"
                     /protein_id="HET9013760.1"
                     /translation="MASNVYDFDVTALDGKPRPMADYRGKVLLIVNVASACGYTPQYK
                     GLEALYRKYHDRGFEVLGFPCNQFGGQEPGSADEIAAFCSTKYDVTFPLFAKIDVNGA
                     HAHPLYEHLKAEAPGALGTKGIKWNFTKFLVDARGEVVERYGSSTTPEQIDADVAKLL
                     DSNPSGT"
     gene            1581..2417
                     /locus_tag="VFN38_18180"
     CDS             1581..2417
                     /locus_tag="VFN38_18180"
                     /inference="COORDINATES: protein motif:HMM:NF042769.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013761.1"
                     /translation="MSQDPPRRHMREIPMVYPQPDADQVVTRLGIEFAQTASGPLTLD
                     VYAPARRSTPVALPAIVLVAGYSDVGYEGGMGCRFKDMALSTTWARLVASFGMIAVTY
                     GNERPAEDLESLLRYVREHAAELGIDAERLALWGLSGNGPLALATLASAPAGSFKCGV
                     FSCAYLADLDGATHVADAQKLWRFVYPGGFNVESMPVDLPLLFVRAGQEQDPGLNVAV
                     DRLVAAMLTANRPVTCVNFAAAPHGFEIFHDTLETREVMRQMFRFARFYLAGTAAEGV
                     NV"
     gene            complement(2438..>2870)
                     /locus_tag="VFN38_18185"
     CDS             complement(2438..>2870)
                     /locus_tag="VFN38_18185"
                     /inference="COORDINATES: protein motif:HMM:NF017496.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="Uma2 family endonuclease"
                     /protein_id="HET9013762.1"
                     /translation="VSGNLHGLIWSHLQGHDAGKVYSAPLDVVFSHFDVVEPDLLFVS
                     SARCEVLTSKNVQGAPDLVVEIGSPSTRRRDEKLKHQLYERFNVAEYWVVDPDIDVVR
                     VYRLESGKYLRAQELSLDHGDVLTTPLLPGLELPLSRVFAE"
BASE COUNT          473 a          928 c          992 g          477 t
ORIGIN      
        1 cgctgggacg accgcaacct cgacatgttc ttctcgccaa acgagctgac gccgatcgcc
       61 tacgtagggt cctgctgcgc cggcacggct ccgggcgtca tcgatgctga tctgaaagcg
      121 ccgtacaccg ccgagttctt catcggcgcc gagcatcgaa tgggcgcctg gcggatgcgg
      181 atgaccggcg tcgatcggcg cgagcgcaat ctcgccgcgt tggtgaacac gggcgtgccg
      241 ctcagcgagt acgtgacgct cgacgtcggc gacagcggca tcgacgtgga cggcaacacc
      301 accgcgcaga cgctgcggct gtacggccgc acgccggcga tgttcgggcg cgaccgctac
      361 acgttgatga atccagacgg gctgacggcg ctctatcagg gcgtggacat cacggtggat
      421 cgcgatctgt tccgccgctg gttcttccgt ttcggcgggt cggcctaccg catcaagagc
      481 acgggggcga accgcggctt cctctcgagc gagaacgacc acggcctgct gggcgaagcg
      541 tttctgtggc ccaacgcgct cacctccgcc gaagggcgct cgtacttcga ccgcgccttc
      601 gtgatcaagc tgtcgggctc gtatcgcgcg cccggcgacg tgcgcatcgg catggtggcg
      661 cgctaccagg acggcctgcc gttctcgcgc atggtgctca ccgacgcgtt ctatcaaggg
      721 cgcgacctcg tgatggccat tccgcgcggc gcgcagcggt ttacctacat gttcacgctc
      781 gacgcgaaga tcgagaagga cgtgtcgttc gggcggcggc aggtgggcgt gatcctcgag
      841 gcctacaacc tgaccaacgc caccatcgag gccgaggaat acgtcgtgac cggccatgag
      901 ttccggcggg tgtcggccgt gcagccgccg ctcgcgctgc gcgtcgggct ccgggtcggg
      961 ttctgaaaga aaagagggtc ttatggcgag caacgtctac gacttcgacg tgaccgcgct
     1021 cgacggcaag ccgcggccga tggcggacta ccgcggcaag gtgctgctga tcgtcaacgt
     1081 ggcgagcgcc tgcggctaca cgccgcagta caaggggctc gaggcgctct accggaagta
     1141 tcacgaccgc ggcttcgagg tgctcgggtt cccgtgcaac cagttcggcg gccaggaacc
     1201 gggatcggcc gacgagatcg cggcgttctg cagcacgaag tacgacgtca cgttcccgct
     1261 gttcgcgaag atcgacgtga acggcgcgca tgcgcacccg ctctacgagc acctgaaggc
     1321 cgaggcgccg ggggcgctgg gcaccaaggg gatcaagtgg aacttcacga agttcctggt
     1381 ggacgcgcgc ggcgaggtcg tggagcggta cgggtcgtcc acgacgccgg agcagatcga
     1441 cgccgacgtg gcgaagctgc tggacagcaa cccctccggt acgtagactc acaggaggcc
     1501 ggcaccgccg gccctcaagc cgcccgcgca gcgccatcag gcactgccgg cggctttcgt
     1561 gttttcagga gggaggacgt atgtcgcagg acccgccacg ccgccacatg cgcgagattc
     1621 cgatggtcta cccgcagccg gacgccgacc aggtggtcac gcggctcggc atcgagttcg
     1681 cgcagaccgc ctcgggtccg ctgaccctcg acgtctacgc gccggcgcgc cggtccacgc
     1741 cggtcgcgct gcccgccatc gtgctcgtgg ccgggtattc cgacgtcggt tacgagggtg
     1801 ggatggggtg ccgcttcaag gacatggccc tgtccacgac gtgggcgcgg ctcgtggcgt
     1861 cgtttgggat gatcgcggtg acctatggca atgaacggcc ggccgaggac ctcgagtcgc
     1921 tgctgcgcta cgtccgcgag cacgccgcgg agctcggcat cgacgccgaa cggctggcgc
     1981 tgtggggctt gtcgggcaac ggtccgctcg ccctcgccac gctggccagc gcgccggccg
     2041 gcagcttcaa gtgcggagtg ttcagctgcg cgtatctcgc cgacctcgat ggcgccacgc
     2101 acgtggccga cgcccagaag ttgtggcgct tcgtgtatcc gggcggcttc aacgtcgaga
     2161 gcatgcccgt ggatctgccg ctgctcttcg tcagggcagg gcaggagcag gatccgggac
     2221 tgaacgtcgc ggttgatcgg ctggtcgcgg cgatgctgac ggccaaccgg ccggtgacct
     2281 gcgtgaactt cgccgccgcg ccgcacggct tcgagatctt ccacgacacc ctggaaacgc
     2341 gcgaggtgat gcgccagatg ttccgcttcg cgcgcttcta cctggccggc acagcggccg
     2401 agggcgtgaa cgtgtagagg gcggtcttga gaccgcccta ctctgcaaag actctggaga
     2461 ggggtagttc gagaccaggc aggagcggcg tcgtgaggac gtcgccgtgg tcgagagaga
     2521 gttcctgcgc gcggaggtat ttgccgcttt cgagccgata gacgcggacc acgtcgatgt
     2581 cgggatcgac gacccagtac tcggcgacgt tgaagcgttc gtagagctgg tgtttgagct
     2641 tctcatcgcg ccggcgggtg ctgggagagc cgatctcgac aaccaggtcc ggagcgcctt
     2701 ggacgttctt cgatgtcaac acttcgcacc gcgccgaact cacgaacaga aggtcgggtt
     2761 cgacgacatc gaagtggctg aacaccacgt ccagcggcgc cgaatagact ttgccggcgt
     2821 cgtggccctg caagtgactc caaatcagac cgtgcagatt cccgctcacg
//
LOCUS       DASSYW010001154         3472 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1376865, whole genome shotgun sequence.
ACCESSION   DASSYW010001154 DASSYW010000000
VERSION     DASSYW010001154.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3472)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3472)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3472
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1376865"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1015)
                     /locus_tag="VFN38_18190"
     CDS             complement(<1..1015)
                     /locus_tag="VFN38_18190"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HET9013763.1"
                     /translation="MSRPGTVAESEEFAPPRVAWYVVAVLALANTSAFIDRQILGLLV
                     GPIRRDLGITDTQMGVLYGLAFALFYTLLGIPIGRVADRASRRTIIAVGIAVWSVMTA
                     LCGMARTYDQLLLARFGIAIGEAALAAPALSLIADYFAPDRRATAFSVYTLGVYLGAG
                     LANLVGGALLARFDGTAAVVWPIIGEIRPWQQVFVLVGLPGLAIALLVAAIAEPARHE
                     TGQHGDSRPFAIVEVTRYVAANRRTFLCHGFGYALFALVNFATAAWLPTHLIRTYGWT
                     AARAGITLGALTATVGVAGVVAGGRASDLLMARGHADAKLRVGIIAAVANLVCGIAYT
                     LAPS"
     gene            complement(1012..1188)
                     /locus_tag="VFN38_18195"
     CDS             complement(1012..1188)
                     /locus_tag="VFN38_18195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013764.1"
                     /translation="METGSTWGTWLAYSAIVAFLILLVAVFVRTMAMFATLTIMPLSR
                     VGRWCLRIIRRRES"
     gene            complement(1206..2483)
                     /locus_tag="VFN38_18200"
     CDS             complement(1206..2483)
                     /locus_tag="VFN38_18200"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HET9013765.1"
                     /translation="MPNLPLLLVQIIVILVAARIVGALVRRVGQPQVVGEMIAGIALG
                     PSILGAQAPAISAALFPPSSLGFLNALSQVGLLVFMFLVGLELDPKIIRERGRAALVI
                     SHASIVAPFLLGTILAIALYPTLAGSQVTFTSFALFMGAAMSVTAFPVLARILGERRL
                     LRTPIGAVAVACAAIDDVTAWCILAAVVVIVRATGGPASGAGVPLWVTIGGSAAFAAL
                     MLTAGRRLLRTLETRYAASGRVTQDAIAILMIAMLASAWITERLGVHALFGAFLVGAV
                     SPKRPELVRALLDRFEDVMVVLLLPLFFAFTGLRTEVTLIDGAAGWLACAAVVVVAVA
                     GKLGGSAIAARAVGMPWREASVIGVLLNTRGLMELVILNVGLDIGVISRELFAMMVLM
                     ALATTFMTTPLVAWLQPSPAPDRAAVPAALASS"
     gene            2896..3126
                     /locus_tag="VFN38_18205"
     CDS             2896..3126
                     /locus_tag="VFN38_18205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013766.1"
                     /translation="MTRFEFALKSPDEIRQAGVVQSESFNDALSLVSKNVTVQDGDTL
                     EIGVAGFPPARYAFVASDAVDAVSWRPLGLAA"
     gene            complement(3286..>3472)
                     /locus_tag="VFN38_18210"
     CDS             complement(3286..>3472)
                     /locus_tag="VFN38_18210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="metallopeptidase TldD-related protein"
                     /protein_id="HET9013767.1"
                     /translation="NGKISKALKNFRFNESPLFMLNNLEALGRPVRLAGTEAGGSIVV
                     PAIKVRDFNFTSLSDAV"
BASE COUNT          641 a         1148 c         1200 g          483 t
ORIGIN      
        1 cgctgggcgc gagcgtgtac gcgatgccgc agacgaggtt ggcgaccgcg gcgatgatgc
       61 cgacgcggag cttcgcgtcc gcgtgaccgc gcgccatgag caggtcggag gctcggccgc
      121 ccgcgacgac tcccgccacg ccgacggtcg cggtgagggc gcctaacgtg atcccggcgc
      181 gcgcggccgt ccagccgtag gtgcggatca ggtgcgtcgg aagccacgcg gcggtggcga
      241 agttcaccag cgcgaagagc gcgtagccga atccatgaca gagaaaggtc cggcgattcg
      301 cggcgacgta ccgcgtcacc tcgacgatcg cgaacggacg cgaatcgccg tgctgccccg
      361 tctcgtgtcg cgccggctcg gcgatcgccg cgacgaggag cgcgatcgcc agcccgggga
      421 gtcccacgag cacgaagacc tgctgccacg gccggatctc gccgatgatc ggccacacca
      481 ccgcagcggt gccgtcgaac cgcgcgagca gcgcgccgcc cacgaggttc gcgagcccgg
      541 caccgagata cacgccgagt gtgtagacgc tgaacgccgt cgcgcggcga tccggggcga
      601 agtagtccgc gatgagcgag agtgcgggtg ccgcgagcgc cgcctcgccg atcgcgatgc
      661 cgaatcgcgc gagcagcagc tggtcgtacg tgcgcgccat gccgcagagc gcggtcatga
      721 cgctccacac cgcgatgccg acggcgatga tcgtgcgtcg gctcgcgcgg tccgccacgc
      781 ggccgattgg gatcccgagc agcgtgtaga agagggcgaa cgcgagcccg tacagcacgc
      841 ccatctgcgt gtcggtgatg ccgaggtcgc gccggattgg cccgacgagg aggcccagga
      901 tctggcgatc gatgaacgcg gacgtgttcg cgagcgccag caccgcgacc acgtaccagg
      961 cgactcgcgg gggcgcgaac tcctccgact cggctaccgt cccggggcgg ctcacgactc
     1021 gcgtcgccgg atgatacgga ggcaccaccg gccgactcgc gacagcggca tgatggtgag
     1081 cgtcgcgaac atcgccatgg tgcgaacgaa cacggcgacg agcaggatga gaaacgcgac
     1141 gatagccgag taggcgagcc aggtgcccca ggtcgaaccg gtttccacgt gtgcctaacg
     1201 ccgagtcagg acgatgccag ggcggcgggt accgccgcgc ggtcgggtgc cggggacggt
     1261 tgcagccacg cgacgagcgg cgtcgtcatg aacgtggtcg ccagcgccat gagcaccatc
     1321 atcgcgaaca gctcgcgcga gatcacgccg atgtcgagcc cgacgttcag gatcacgagc
     1381 tccatgaggc ctcgcgtgtt gagcagcacg ccgatcacgg acgcctcgcg ccacggcatc
     1441 ccgacggctc tcgccgcgat cgccgacccg ccgagttttc cggccaccgc tacgacaacc
     1501 acggcggcgc acgccagcca accggcggcg ccgtcgatga gcgtcacttc cgttctgagt
     1561 ccggtgaacg cgaagaagag cggcagcagc aagacgacca tcacgtcctc gaaccggtcc
     1621 agcagtgcgc gtacgagctc cgggcgcttc ggactcacgg cgccgacgag aaacgcgccg
     1681 aacagcgcat ggacgccaag ccgttcggtg atccatgccg atgcgagcat ggcgatcatg
     1741 aggatcgcga tcgcgtcctg cgtcacacgg ccgctcgctg cataacgagt ctcgagcgtt
     1801 cgcaggaggc gccggccggc agtgagcatg agcgccgcga acgccgcaga cccgccgatc
     1861 gtgacccaca gcggtacgcc ggcaccggag gccggtccac ccgtcgcgcg gacgatcacg
     1921 acgaccgccg cgaggatgca ccacgcggtg acgtcgtcga tcgccgcgca cgcgaccgcc
     1981 accgcgccga tcggcgtccg cagcagtcgc cgctcgccga ggatgcgagc cagcacgggg
     2041 aacgccgtca cgctcatcgc cgcccccatg aagagcgcga agctcgtgaa cgtcacctgg
     2101 ctcccggcga gcgtcggata gagcgcgatg gcgaggatgg tcccgaggag aaacggcgcg
     2161 acgatgctcg cgtgactgat gaccagcgcc gcgcgtccgc gctcgcgaat gatcttcggg
     2221 tcgagctcga gtccgacgag gaacatgaac accagcagcc cgacctggct cagcgcattg
     2281 aggaacccca ggctgctcgg cggaaacagc gccgcggaga tcgccggcgc ctgcgcgccg
     2341 aggatcgacg gacccagcgc gatgccggcg atcatctcgc cgacgacctg tggttggccg
     2401 actcgccgga cgagcgcgcc cacgattctc gccgcaacca gaatgacgat gatctggacg
     2461 agcaggagcg gcaggttcgg cacaacggcg gacgttgcgg cggcgatacc ggtcgcgccg
     2521 gatggtccga cgctctgagg gacggctcgt ggcccattcg acgcccatac tgcgcctata
     2581 cggaggatga caagcagggc caacgccggt ccccccacca gtgtcgcata ggtgggaaca
     2641 aatccggcat gcgaacgtct atgctctgac atcggagaaa gatccgagcg gacgggtgcg
     2701 gcgtaccaga gttggggagc cggaaacccg gttcgagggc cggccgtacg ggctcaaaac
     2761 tgcggtagca gggtagtatc agccaggacg ggttcggcgg ctccggcggg tggtccggga
     2821 gatacacgga ctcgtttact cagtcgcgtg ggattccacg cgttttcaca tagacctccg
     2881 gcgcaggagg atgtcatgac gcggttcgaa tttgcactca agagccccga cgagattcgt
     2941 caggcgggtg tcgttcagag cgagtcgttc aacgatgcgc tctcgctcgt gagtaagaat
     3001 gtgacggtcc aggacggcga cacgctcgaa atcggcgtcg ccggatttcc gccggcgcgt
     3061 tatgcgttcg ttgcgtcgga tgcggtcgat gcagtcagtt ggcgcccgtt agggctcgcg
     3121 gcataaaggc tgggaagcgg gaagagccgg gaaacgggaa acgggaagcg ggaagcggga
     3181 agcgggaagc ggtaagaacc ctcgggatgc ctctctctgt gagagtcaca tcccgagggt
     3241 ttcccgtttc ccgtttcccg tttcccgttt cccggctctt cccgctcaga cagcgtccga
     3301 tagactcgta aagttgaaat cccgcacctt gatcgccggg acgacgatcg atccgccagc
     3361 ctccgtgccc gcgagccgga ccggccgccc cagcgcctcg agattgttca gcatgaagag
     3421 cggcgattcg ttgaaccgga aattcttgag cgccttcgag atctttccgt tc
//
LOCUS       DASSYW010001155         2464 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1744854, whole genome shotgun sequence.
ACCESSION   DASSYW010001155 DASSYW010000000
VERSION     DASSYW010001155.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2464)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2464)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2464
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1744854"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2457
                     /locus_tag="VFN38_18215"
     CDS             <1..2457
                     /locus_tag="VFN38_18215"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HET9013768.1"
                     /translation="GSPTVMREHTRDADRISLVDDLRQDLAFAARSLRRRPAFTAVAL
                     LTLGLGIGATTAIFTVVRSVLLRPLPFAQPDALQAVDYAAPARSWLYPGMSDRGYLAY
                     REATRTFASLATFAAAQCTLTGAGDATRLTGAAVTADFFNVLGVAAASGRTIQPGDDH
                     AEGEKIVVLSHAVWRDRFASDASVLDRILTLNGVGHRVVGIMPPGFSYPGDAVYWIPL
                     AVRIQPNLGFTRPVIGRLKPGMTRDQAQADLDLWVNSLPPDPRRPASLVARVTPLHRA
                     MVGDARLPLLVFGGAVVFLLSIACANVANLLLMRAISRRQEIATRLALGAGRGRLVRQ
                     LLTESALLSIAGGLVGVALAWLAGPALLALVPVGRLPNDIAIAADGWVLAFTAGLSVL
                     TGLAVGLAPIVQLGAANQYVTLRSHAVTPQSHRLRQALVVAQVALTLVLLVGAGLLVR
                     SFAGLRGVPLGFSAARVMTMTVDLPMSRYATAADATAFHARLLQALASMPGIQSTAAV
                     NWLPLGNMVIFGDVQAEDRSDLVGQYNATKVAVSPRYFETIGIRVLRGRDFTDADRPG
                     SLPVLVVSESVARRLWPGGDPIGRRMALRDNPRPEDWLTVIGVVEDVRQGGFKSDPTH
                     AVYQPFIQVTNRFFVGYMTFLARTTNDAEGSAPLMREALRQVDKDEAPESLAALDAVI
                     DRSVADPKFQARVLVLFSSVALLLAAVGIYGVMAASVLERRFEIGVRMALGADQSSLV
                     RMVLRRTMRLTAAGLAVGVGGALALTRALETLLFNVTPTDAATFGGAVVILVAAAIAA
                     SLLPARRASSIDPLVALRAE"
BASE COUNT          296 a          892 c          843 g          433 t
ORIGIN      
        1 ggcagcccga cggtaatgcg cgagcacacg cgcgacgccg atcgcatcag cctcgtcgac
       61 gatttgcgcc aggacctcgc ctttgcggcg cgcagcctgc gccgccgccc cgcctttacc
      121 gccgttgcgc tgctcacgct cggactcggg atcggtgcga ccaccgcgat cttcaccgtc
      181 gtccgcagcg tgctgctgcg gccgctgccg tttgcgcagc cggatgcgct gcaggcagtg
      241 gactacgcgg cgcccgcgcg atcgtggctc tatccgggca tgtcggatcg cggctatctc
      301 gcgtaccgcg aagcgacccg caccttcgcg tcgctggcga cgttcgcggc cgcgcagtgc
      361 acgcttaccg gcgccggcga cgcgacgcgc ctcaccggcg cagcggtgac cgcagacttc
      421 ttcaacgtgc tcggcgttgc cgccgcctcc gggcgcacca tccagcccgg cgacgatcac
      481 gccgagggag agaagatcgt tgttctgtct cacgccgtgt ggcgcgatcg cttcgcgtcg
      541 gacgcctccg tgctcgaccg catactgacg ctcaacggcg tgggccatcg cgttgtcggc
      601 atcatgccgc cgggcttttc gtatccgggg gatgcggtgt actggatccc gctggccgtg
      661 cggatccagc cgaacctcgg cttcacgcgg ccggtcatcg gccgcctcaa gcccggtatg
      721 acacgcgacc aggcccaggc ggatctcgat ctgtgggtga atagtctgcc gcccgatccg
      781 cggcgtccgg ccagcctcgt cgcgcgcgtg acgccgcttc accgcgccat ggtgggcgac
      841 gcacggctgc cgcttctcgt tttcggcggc gctgtcgtct ttctgctgtc gatcgcatgc
      901 gcgaacgtcg cgaacctgct gctcatgcgc gccatctcgc gccgccagga gattgccacg
      961 cggctggcgc tcggtgccgg ccgcggccgc ctcgtgcgtc aactcctgac ggagtcggcg
     1021 ctgctctcga tcgcgggcgg cctcgtcggc gtggcgctcg cctggctcgc cgggccggcg
     1081 ctccttgcgc tcgtgccggt cgggcggctc ccgaacgata tcgcgatcgc cgccgacggc
     1141 tgggtcctcg ccttcaccgc cggcctgtcc gtgctcacgg gcctcgcggt tgggctcgcg
     1201 ccgatcgttc agctcggcgc cgccaaccag tacgttacgc tccgcagcca cgcggtcacg
     1261 cctcagtccc atcgcctccg ccaggcgctc gtcgtcgcgc aagtcgcgct cacgctcgtg
     1321 ctgctcgtcg gcgccgggct gctcgtccgc agctttgccg gcctgcgcgg cgtcccgctc
     1381 ggcttctcag cggcacgggt gatgacgatg acggtcgatc tcccgatgtc gaggtatgcg
     1441 acggcagcgg acgcgacggc gtttcacgcg cgtctgttgc aggcgctggc ctcgatgccc
     1501 ggcatccagt ccactgccgc cgtcaactgg ctgccgctcg gcaacatggt gatcttcggc
     1561 gacgtccagg ccgaagatcg atccgatctt gtcgggcagt acaacgcgac gaaggtcgct
     1621 gtcagcccgc gctacttcga gacgatcggg attcgcgtgc tgcgcggccg cgacttcacg
     1681 gacgccgatc gccccggcag cctgccggtg ctcgtcgtca gcgagtccgt cgcgcgccgt
     1741 ctgtggccgg gcggcgatcc gatcggccgc cgcatggcgc tccgggacaa tccgcggccg
     1801 gaagactggc tcacggtgat cggcgtcgtc gaagacgtgc ggcagggagg cttcaagagc
     1861 gacccgacgc acgccgtcta tcagccgttc atacaggtca ccaaccggtt cttcgtcggc
     1921 tacatgacct tcctcgcgcg gacgacgaac gacgcagagg gttcggcgcc gctgatgcgc
     1981 gaagcgttgc ggcaggtgga caaggatgaa gcgccggagt cgctcgccgc tctggacgcc
     2041 gtcatcgacc gcagcgtcgc agatccgaag tttcaagcgc gcgtgctggt gctgttctcg
     2101 agcgtcgcgc tgctgctcgc ggcggtcggt atttacggcg tgatggcggc gtcggtgctc
     2161 gagcgccgct tcgagatcgg cgttcggatg gccctcgggg ccgaccagtc gtcgctcgtg
     2221 cgcatggtgc tgcggcgcac gatgcggttg acggccgccg gcctcgcggt cggggttggc
     2281 ggcgcgctgg ccctgacccg ggctctggag acgctgctct tcaacgtcac gccgacagat
     2341 gccgccacgt tcgggggcgc cgttgtgatc ctcgtcgccg cggccatcgc cgcctcgctg
     2401 cttccggcgc gccgcgccag ctcgatcgac ccgctcgtgg cgctgcgggc ggagtaggcc
     2461 tagg
//
LOCUS       DASSYW010001156         4182 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1011942, whole genome shotgun sequence.
ACCESSION   DASSYW010001156 DASSYW010000000
VERSION     DASSYW010001156.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4182)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4182)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4182
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1011942"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..762)
                     /locus_tag="VFN38_18220"
     CDS             complement(<1..762)
                     /locus_tag="VFN38_18220"
                     /inference="COORDINATES: protein motif:HMM:NF024589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HET9013769.1"
                     /translation="MPPNAARPLDGISPGADQPFPLPLIGRQSELAVLSARLEAGRAG
                     AGSTTLIAGEGGVGKSRLVSAVGERARAQGWSVALGRAYPVETGVPFALFADALTPIL
                     RALTPSALAVLTRGDAATLASVCPAFGVGAPPAAARDTGGDAKARLLWSFSQFLAQLA
                     AQRPLLLVLENLHWADASSLELLHFVARQIVGHPIALLGTYNDSAKDASPALRATEQS
                     LLSVGAATSIHLEPLGVGALHELVREVFRADDASAR"
     gene            complement(847..1314)
                     /locus_tag="VFN38_18225"
     CDS             complement(847..1314)
                     /locus_tag="VFN38_18225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013770.1"
                     /translation="MATIENGGDDGTRERDASSVDFAQYRARRLRLRVLDLLDALIVA
                     MERRDPQAVWDVLDEEEAVRWLPDAVRQEALVIARLPAASLRAPMRTYRFYHQIQQLA
                     DEILPLSDEAQQLQLDLAPGASRPAIPFPDRPSAPPDDPWHDGGTGHRRSGSR"
     gene            1558..1770
                     /locus_tag="VFN38_18230"
     CDS             1558..1770
                     /locus_tag="VFN38_18230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013771.1"
                     /translation="MTTRRVLPQNQESMLEWLEQRRTALIAAYRAALVADGPSMTVKQ
                     LDEAVERWTEFAIGRSTYRERRRMAS"
     gene            1898..2755
                     /locus_tag="VFN38_18235"
     CDS             1898..2755
                     /locus_tag="VFN38_18235"
                     /inference="COORDINATES: protein motif:HMM:NF018684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme inhibitor LprI family protein"
                     /protein_id="HET9013772.1"
                     /translation="MKNRSLSWTLALILTAAACGDGTKEESPGEVLARDSSLASDLKQ
                     ADTSAFAEAADVAMAFDPDSALPPAVVKPSAPAAAVPSTTTPATAAPTTTVPMRVDRS
                     TPVSSTPPSPAARAPMRPAPATIHPDPVPTTRMPAAPASRSTTTSGAAPAARATSILE
                     KVPGATLPPAGSDEPCASPASADQRRCLMLHLARTDVALDRTYQALIADLKREAGTPA
                     RGREPETVTQLRVAQRAWLVYRDTECRRRNRGKEGPLWAPVRAECLGEFSGQRTEELA
                     RALRERQGR"
     gene            complement(2760..3512)
                     /locus_tag="VFN38_18240"
     CDS             complement(2760..3512)
                     /locus_tag="VFN38_18240"
                     /inference="COORDINATES: protein motif:HMM:NF039204.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5715 family protein"
                     /protein_id="HET9013773.1"
                     /translation="MRMSARAGLLLSLLAAPAGLARADALSGSPSSMAHQHRIAVRED
                     YSFLRTPKDVQTLATTGALVPVTESEDLALSKVSYPLARPEVRGFVERFAADFRAATG
                     SRLVVTSLTRPAAEQPRNAHKLSVHPAGMAVDFRVPADSAGRAYLETALLALERAGVL
                     DVTRERSPAHYHVAVFAEAYAPWAARHDSLAAVERARVAAEARSARTAAASPPRSSSD
                     EFPLPAFVVGLLALAGMTAPVIYRGSRTRARG"
     gene            3838..>4182
                     /locus_tag="VFN38_18245"
     CDS             3838..>4182
                     /locus_tag="VFN38_18245"
                     /inference="COORDINATES: protein motif:HMM:NF024923.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-binding protein"
                     /protein_id="HET9013774.1"
                     /translation="MNRKRILIAVVALVALTAILGFVLRSRRGGDTAYRTGKVELGNI
                     EQTVSATGALSAVKTVQVGTQVSGLLAGIFADFNDRVTKGQLLARIDPTLSEQAVRDA
                     QAGIARSQAEQAK"
BASE COUNT          628 a         1479 c         1565 g          510 t
ORIGIN      
        1 gcgggcggag gcgtcgtccg cgcgaaacac ctcgcgcacg agctcgtgca gcgcgcccac
       61 gccgagtggc tcgaggtgga tgctggtggc ggcgcccacc gagagcagcg actgctcggt
      121 ggcgcgcagg gcggggctcg cgtccttcgc cgagtcgttg taggtgccga gcagcgcgat
      181 ggggtggccg acgatctgcc gcgcgacgaa gtgcagcagc tcgagcgacg atgcatcggc
      241 ccagtggagg ttctcgagca cgaggagcag cggacgctgc gccgcgagct gcgcgaggaa
      301 ctgcgagaag ctccagagga gcctcgcctt ggcgtcgccc cccgtgtcgc gcgcggcggc
      361 cggcggcgcc ccgacaccga acgcgggaca cacgctggcc agggtggcgg cgtcgccccg
      421 ggtgagcacc gcgagggcgg acggcgtgag cgcgcgaagg atgggggtga gggcgtcggc
      481 gaacagggcg aagggcacgc ccgtctccac cgggtacgcg cggccgagcg ccaccgacca
      541 tccctgcgcc cgcgcccgtt cgccgaccgc gctcaccagg cgcgacttgc ccaccccccc
      601 ctcgccagcg atcagggtcg tgctgcccgc accggcgcgc cccgcctcga gccgcgccga
      661 gaggacggcg agctccgatt gtctgccgat gaggggaagc ggaaagggct gatcggcccc
      721 cggcgagatt ccgtcgagcg ggcgcgcggc gttgggaggc atgccgacaa agatccccgt
      781 ggccgcgggg atggcaatag cgtcggaagg tgtggcgtgc gcgcgccgct cagcggcgcg
      841 cggtgctcag cgcgaccccg aacgacggtg ccccgtccct ccgtcgtgcc acgggtcgtc
      901 gggcggcgcg ctcggccgat cggggaaggg gatggcgggg cgcgatgcac cgggcgcgag
      961 gtcgagctga agctgctgcg cctcgtcgct cagcgggagg atctcgtcgg ccagctgctg
     1021 gatctggtga tagaagcggt aggtgcgcat cggggcgcgg agggacgcgg cgggcaggcg
     1081 cgcgatgacg agcgcctcct gacggaccgc gtcggggagc cagcgcaccg cttcctcctc
     1141 gtcgagcacg tcccacacgg cctgcgggtc gcgccgctcc atcgcgacga tgagggcgtc
     1201 gagcaggtcg agcacgcgca gccgtagtcg gcgcgcgcgg tactgggcga agtcgaccga
     1261 cgaggcgtcg cgctcgcggg ttccgtcgtc gccaccattc tcgatcgtgg ccataggaac
     1321 agcccgcacc gcacgctgcg tgctctccac cggatgccca caggcggctg tggagggcgg
     1381 tgtggaaaga ccggccaacg gccccgctgg gcggttgccg acggcgctcc ctgaccatgt
     1441 gaatggaagc aagccgaaac gccggtgcgt tacgcccttg acattgtcgc gtccgatagg
     1501 acacaacgcc ccaatgtctc atccttttcc acccactgga cacgcgagca tgatccgatg
     1561 acaacccgga gagtcctacc gcagaaccag gaatcgatgc tggagtggct cgaacaacgg
     1621 cgcaccgcgc tcatcgcggc ctaccgcgcg gcgctcgtcg ccgacggccc gtcgatgaca
     1681 gtgaagcagc ttgatgaagc cgtcgagcgc tggacggagt tcgcgatcgg gcgcagcacc
     1741 taccgcgagc gccgccgcat ggcctcctga tcccgcgcgg cggcccgatg aggccgcgcg
     1801 cggggtcgca gcaccgctgt gcgcgtcgtc acaccctgcc acggcggcgc gggaatcgca
     1861 tgaacggccg atcgacttcc accggatcgg ccgaccgatg aagaatcgct ctctctcctg
     1921 gacgctcgcg ctcatcctga cggccgccgc ctgcggcgac ggcacgaagg aggagtcgcc
     1981 cggcgaggtg ctggcgcggg acagctcgct cgcgagcgac ctcaagcagg ccgacacctc
     2041 ggccttcgcg gaagccgccg acgtggcgat ggccttcgac ccggactcgg cgctgccgcc
     2101 ggcggtggtg aagccctccg cgcccgccgc cgcggtgccc tccacgacga cgccggccac
     2161 cgccgcgccg acgacgacgg tgcccatgcg cgtggaccgc tcgacacccg tgagcagcac
     2221 gccgccttct ccggccgctc gcgcacccat gcgtcccgcg ccggccacca tccaccccga
     2281 cccggtcccg accacgcgga tgccggccgc gccggcgagc cgcagcacga cgaccagcgg
     2341 cgcggcgccg gccgcgcgcg cgacgtccat cctggagaag gtgcccggcg ccacgctgcc
     2401 gccggccgga agcgacgagc cctgcgcgtc gcccgcgtca gccgaccagc gccgctgcct
     2461 gatgctccat ctcgcgcgca ccgacgtcgc gctcgaccgc acctatcagg cgctgatcgc
     2521 cgacctcaag agggaggcgg ggacgccggc ccgcggccgg gagccggaga cggtgaccca
     2581 gcttcgcgtg gcccagcgcg cctggctggt gtaccgcgac accgagtgcc gtcggcggaa
     2641 tcgcgggaag gaggggccgc tgtgggcgcc ggtgcgcgcc gagtgcctgg gcgagttctc
     2701 gggccagcgg acggaggagc tggcgcgcgc gctgcgggag cggcagggcc gctgagccgt
     2761 cagccgcggg cgcgcgtccg gctgccgcgg tagatcaccg gcgcggtcat tcccgcgagg
     2821 gccaggagcc cgaccacgaa ggcgggcagc ggaaactcgt cgctggagga tcggggaggc
     2881 gatgcggcgg cggtccgcgc gctcctcgcc tcggcggcga cccgcgcccg ctcgacggcg
     2941 gccagcgagt cgtgccgcgc ggcccacggc gcatacgcct cggcgaacac ggcgacgtgg
     3001 tagtgcgccg gcgagcgctc gcgcgtcaca tccagcacgc ccgcccgctc cagcgcgagc
     3061 agcgcggtct ccaggtaggc gcgaccggcc gagtcggccg gcaccctgaa gtccaccgcc
     3121 atgccggcgg gatgcacgga gagcttgtgc gcgttccgtg gctgctcggc cgcgggacgg
     3181 gtgaggctgg tcacgacgag gcgcgaaccg gtggcggcgc gaaagtccgc cgcgaagcgc
     3241 tcgacgaagc cgcgcacctc gggccgcgcg agcggatacg acaccttgct gagggccaga
     3301 tcctcgctct ccgtgacggg gacgagggcg cccgtcgtgg cgagcgtctg cacgtccttc
     3361 ggggtgcgca ggaagctgta gtcctcgcgc accgcgattc ggtgctggtg cgccatggac
     3421 gagggcgagc ccgaaagggc gtcggcgcgc gcgaggccag cgggtgccgc gagaagggac
     3481 aacaggagac cggctcgggc tgacatacgc atgaggctgc ctccatgtgg tcgagtgtgg
     3541 gaaggacggg gacttcatgg cgcgcccatc acctgaaggg gcacgggtgt gatacacctc
     3601 accatcgaga aggctccgct cgccgctcga gcgagctcgg ccttcgctgg cttaccaaca
     3661 gtcggcgccc cggggtcgta ctgaacttca gacggcctgt ggcccaggcg gtgcagcgtg
     3721 cgcggcagga ccacctcgtg ccgagctcgc tgacacgcgc ttcaggtcac caaggtgagg
     3781 atgtcgcgct gaagtgtcgc ggacgcggcc ggcggcgaat cccggaacac gaatttcatg
     3841 aatagaaagc gcatcctgat cgccgtcgtg gcgctcgtcg ccctgacggc gattctcggc
     3901 ttcgtgctgc ggtcgcggcg agggggcgac accgcctacc gcaccggcaa ggtggagctg
     3961 gggaacatcg agcagaccgt ctccgccacc ggcgcgctga gcgcggtgaa gacggtgcag
     4021 gtgggcaccc aggtatcggg gctgctcgcc ggcatcttcg ccgacttcaa cgaccgggtg
     4081 acgaaggggc agctgctcgc gcgcatcgac ccgacgctct cggagcaggc ggtccgcgac
     4141 gcgcaggcgg gcatcgcacg cagccaggcg gaacaggcga ag
//
LOCUS       DASSYW010001157         2404 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1722495, whole genome shotgun sequence.
ACCESSION   DASSYW010001157 DASSYW010000000
VERSION     DASSYW010001157.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2404)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2404)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2404
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1722495"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1985
                     /locus_tag="VFN38_18250"
     CDS             <1..1985
                     /locus_tag="VFN38_18250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013775.1"
                     /translation="LIGVHDGLRERWNDSRTLWLPLTLALAPEQYDEQIEVDSLVMRI
                     VGRPFTDGNALTLLRSSDLPLEIARSIFAARDYHLLWTHDFAGRREGTGTVDNVSYEM
                     VSDVYLPALTAAVKRYDATGRMPVYMILLDQFFYEPRDGRLWMSILENPIAASMRLPG
                     DNAAREAHLRERQDELRAAVASSARLQADAARSGGDEWLARTVKVHVSVPYPADFSFR
                     SHAILPPIPFTPDNVMRDHRKIALYDLDEADPFGGAMLLMGVGIGEHYASATWEDRGY
                     RIRGPAALETRDAVRRLLRANGFRETDIPAPLREVTSSAAVEHSMNAGDYVGRALQVH
                     NDVGFGAKQASVVRAMLYDLAQPGSVIIAPDPLWLSAEWGGMLAGAAARGVQVHVIAP
                     AEANAPSPQAPLMALSHDVMLRLLAIGDSLAPVIAREGGALRVGLFAAQAHVDDAAGR
                     RREVQDGLRRAPWISALIPFDAAALAVLDRAEAKSATDGRDATDMAHDEKPRPPQLHH
                     KTQLVARPGAIAAFVRQPGWESVLARAMETQSRQTTRLAEQLGYVTPDIETDATRSAD
                     ALLLGYQRSVPEAERKRVSFYYMLGTQNMDPRGMMLDGEATLVVSGIPAAAGLVDLYY
                     QMARTTWVTTPAQLETLLPPPSGWMRRIAKLIRASL"
BASE COUNT          371 a          865 c          845 g          323 t
ORIGIN      
        1 tgctgatcgg cgtgcacgac ggcctgcgcg aacggtggaa cgactcgcgc acgctctggc
       61 tgcccctcac gctggcgctc gcgccggagc agtacgacga gcagatcgag gtcgactcgc
      121 tcgtcatgcg catcgtgggc cgcccgttca ccgacggcaa cgcgctgacg ctgctgcgca
      181 gcagcgacct cccgctcgag atcgcgcggt cgatcttcgc ggcccgcgac taccacctgc
      241 tctggacgca cgacttcgcc gggcggcgcg aggggacggg gacggtcgac aacgtgtcct
      301 acgagatggt ctccgacgtc tatctccccg cgctcaccgc cgccgtcaag cgctacgacg
      361 cgacggggcg gatgcccgtc tacatgatcc tgctcgacca gttcttctac gagccgcggg
      421 acgggcggct ctggatgtcc attctcgaga accccatcgc tgcctcgatg cggctgcccg
      481 gtgacaacgc cgcccgtgag gcccatctgc gcgagcggca ggacgagctg cgcgccgccg
      541 tcgcgtcgtc cgctcggctc caggccgacg ccgcacggtc gggtggggac gaatggctcg
      601 cgcgaacggt caaggtgcac gtcagcgtgc cataccccgc cgacttctcc ttccgcagcc
      661 acgcgatcct gccgccgatc ccgttcacgc cggacaacgt gatgcgcgac caccgcaaga
      721 tcgcgctgta tgatctcgac gaagccgatc cgttcggcgg agcgatgctc ctcatgggcg
      781 tcggcatcgg ggagcactac gccagcgcga cgtgggagga ccgcggctat cggatccggg
      841 gcccggcagc cctcgagacg cgcgacgcgg tgcgtcgcct gctgcgcgcc aacggattcc
      901 gcgagacgga catccccgcg ccgctgcgcg aggtgacgag cagcgcggcg gtggagcaca
      961 gcatgaacgc gggcgactat gtcggacgcg ccctccaggt gcacaacgac gtcgggttcg
     1021 gcgccaagca ggcatcggtc gtgcgcgcga tgctctacga cctcgcgcag ccggggagcg
     1081 tcatcatcgc ccctgatccg ctctggctga gtgccgagtg gggcggcatg ctggccggcg
     1141 cggcggcgcg cggcgtccag gtgcacgtca tcgcccccgc ggaagcgaac gcgccgagcc
     1201 cgcaggcgcc gctgatggcg ctgtcgcacg acgtcatgct tcgcctgctc gcgatcggcg
     1261 acagcctcgc tcccgtgatc gcgcgcgagg ggggcgcctt gcgcgtcggg ctctttgccg
     1321 cccaggcgca cgtcgacgac gccgccgggc gtcgccgcga agtgcaggac ggacttcgtc
     1381 gcgccccgtg gatcagcgca ctcatcccct tcgacgcagc cgcgctcgcg gtgctcgacc
     1441 gcgccgaggc gaagagcgcg accgatggcc gcgacgccac cgacatggcc cacgacgaga
     1501 agccgcgccc cccgcagctg caccacaaga cgcagctcgt ggcgcgaccc ggcgcgatcg
     1561 ccgccttcgt gcggcaaccg ggctgggaaa gcgtgctcgc ccgcgccatg gaaacgcagt
     1621 cgcggcagac cacgcggctc gccgagcagc tcggctacgt gacgccggac atcgagaccg
     1681 acgcgacgcg cagcgcggac gccctgctgc tcggctacca gcgcagcgtg cccgaggccg
     1741 aacgcaagcg ggtgagcttc tactacatgc tcggcacgca gaacatggat ccgcgcggga
     1801 tgatgctgga cggcgaagcg acgctcgtcg tctccgggat ccccgccgcg gcggggctcg
     1861 tggacctgta ctaccagatg gcgcgcacta cgtgggtgac cacgcccgcg cagctcgaga
     1921 cgctgctgcc tcctccgagc ggctggatgc ggcggatcgc gaagctgatc cgcgcgtcgc
     1981 tatagccgac ggcgtgctgg cggacggagt gcgggcgggg cgtgccccac gccccactcc
     2041 ggcatccccc ggcgtccgtc atgcccggaa cgtgccggtc cgtggcggcg aggctgacga
     2101 gcgcaggcgg tgaagggatg cggggagtgg aaggcacgac agttgcgccc ccacctggta
     2161 gggtcggccg cccacgaccg acgtcacatc catcctggag cgagcatcac atggaaggag
     2221 aaggcgtgcg tccactggac atgcggctcg agcaggtcac ggcatcgctc aaggccagcc
     2281 tcgacgaagt ctgcggcacc gacgtgcagc gcctggacac gagcgagtcc gtgcggatcg
     2341 aggaggtgct cgcgatcgcc agcgaggcgg cccgggaagt cgtgtccatc cgtcgcaagc
     2401 ggcg
//
LOCUS       DASSYW010001158         2183 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_197627, whole genome shotgun sequence.
ACCESSION   DASSYW010001158 DASSYW010000000
VERSION     DASSYW010001158.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2183)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2183)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2183
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_197627"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2183
                     /gene="alaS"
                     /locus_tag="VFN38_18255"
     CDS             <1..>2183
                     /gene="alaS"
                     /locus_tag="VFN38_18255"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004813 - alanine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006419 - alanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HET9013776.1"
                     /translation="MRADEIRSRFLQYFVRNGHEELSSSSLVPADDPTLLFTNAGMVQ
                     FKRTFLGVEHRDYRRAATCQKCVRAGGKHNDLEQVGHTARHHTFFEMLGNFSFGDYFK
                     RDAIRFAWEFVTEELQIDRKHLRVTVHHSDDEARALWREVAGLPDSRIYGLSDKDNFW
                     QMADTGPCGPCTEIYVDLAHVATDWTFPAGAKGEWTDINRGEYSQDAFVEGAEAGRFL
                     EIWNLVFMQYDRQADGKLEPLPKPSVDTGAGLERIAAVLQGVTNNFHTDVFTPLIRRV
                     EKITGIPYRGRESAEHYTVPVAKSGAKARLSSAVKDGKVSVDPAAFRVIADHARAITF
                     LLADGVFPSNEGRGYVLRRILRRGVRYAWLLGRAEPTLAQVAEETIDTMSEAYPELAQ
                     RSKHIVDTVRAEEERFLATIEGGMARFDELAPAHTTQEKTVSGEGAFRLYDTFGFPID
                     LTELMAHERGYTVDIAGFDAALGEQRTRSKDERKTRKLGVESDELGDPLTWERAPEAA
                     TDSRFVGYDTVEIETQVAALRRLGGDRVAVLLRESPFYAESGGQVSDEGEIVGDGWRI
                     DVDGVKKVDGRSAALGRLSGTFHFGWATARVPNARRKDTERNHTATHLLHAALRQVLG
                     DAVHQAGSLVAPDRLRFDFTHHGPVPADRLAEVEARVNKEIWRALPVTWTEMAYPDAR
                     AKGAMALFGEKYGDVVRVVDVPGVSMELCGGTHVRNTAEIGLLVLV"
BASE COUNT          359 a          739 c          769 g          316 t
ORIGIN      
        1 atgcgcgccg acgagatccg ctcccgtttc ctgcaatact tcgtgcgcaa cgggcacgag
       61 gagctctcct cctcctcgct cgttccggcg gacgatccca cgctgctctt caccaacgcg
      121 gggatggtgc agttcaagcg caccttcctg ggggtggagc accgggacta ccgccgggcc
      181 gccacctgcc agaagtgcgt ccgcgccggc ggcaagcaca acgacctcga acaggtgggg
      241 cataccgccc ggcaccacac cttcttcgag atgctcggca acttctcgtt cggcgactac
      301 ttcaagcgcg acgcgatccg cttcgcctgg gagttcgtga ccgaagagct gcagatcgac
      361 cggaagcacc tgcgtgtcac ggtgcaccac agcgatgacg aggcgcgcgc gctctggcgc
      421 gaggtcgccg gtctccccga ttcgcggatc tacggcctca gcgacaagga caacttctgg
      481 cagatggccg acaccggccc ctgcggcccg tgcacggaga tctacgtcga cctcgcacac
      541 gtcgcgaccg attggacctt tcccgccggc gcgaagggcg agtggaccga catcaatcgc
      601 ggcgagtact cgcaggacgc gttcgtcgag ggcgccgagg ccggccgctt cctcgagatc
      661 tggaacctgg tgttcatgca gtacgatcgt caggcggacg gcaagctcga gccgctcccc
      721 aagccgagcg tggacaccgg tgcgggactc gagcgcatcg ccgccgtgct gcagggagtc
      781 accaacaact tccacaccga cgtcttcacg ccgctgatcc gccgcgtcga gaagatcacc
      841 gggatcccgt accgcggccg cgagtcggcc gagcattaca cggtgccggt cgcgaagagc
      901 ggcgcgaagg cccggctctc gtccgcggtc aaggacggca aggtctccgt cgacccggcg
      961 gcgtttcgcg tcatcgccga tcatgcgcgc gccatcacgt tcctcctcgc tgacggggtc
     1021 tttccctcga acgagggacg cgggtacgtg ttgcgccgca tcctccgccg cggcgtgcgc
     1081 tacgcgtggc tgctcgggcg ggccgagccg acgctggcgc aggtcgcgga agaaacgatc
     1141 gacacgatga gcgaggcata tccggagctc gcgcagcggt cgaagcacat cgtcgacacg
     1201 gtccgcgccg aggaggagcg cttcctcgcg acgatcgagg gagggatggc gcgcttcgac
     1261 gagctcgcgc cggcgcacac gacccaggag aagacggtca gcggcgaagg cgccttccgg
     1321 ctctacgaca ccttcggctt cccgatcgac ctcacggagc tgatggcgca cgagcgcggc
     1381 tacaccgtcg acatcgccgg cttcgacgcc gctctcggcg aacagcgcac gcgctccaag
     1441 gacgaacgga agacgcgcaa gctgggcgtg gagagcgacg agctgggcga cccgctcacg
     1501 tgggagcgcg ctcctgaagc ggccaccgac tccaggttcg tcgggtacga caccgtcgag
     1561 atcgagaccc aggtggcggc gctgcggcgc ctcggcggcg atcgcgtcgc ggtgctgctg
     1621 cgcgagtcgc cgttctatgc ggagtcgggg gggcaggtct cggacgaggg ggagatcgtc
     1681 ggcgacgggt ggcgcatcga cgtggacggc gtgaagaagg tggacggccg atcggcggcg
     1741 ctggggcgcc tgtcgggcac cttccacttc ggctgggcca cggcgcgcgt cccgaacgcg
     1801 cggcgcaagg acacggagcg gaatcacacg gcgacgcacc tgctgcacgc ggcgctgcgc
     1861 caggtgctcg gcgacgccgt gcatcaggcg gggtcgctcg tcgcacccga tcgcctgcga
     1921 ttcgacttca cgcatcacgg cccagtgccg gcggatcggc tggccgaggt ggaggcacgc
     1981 gtgaacaagg aaatctggcg cgcgctgccg gtgacatgga cggagatggc gtatcccgac
     2041 gcgcgcgcca agggcgcgat ggcgctgttc ggcgagaagt acggcgacgt cgtgcgtgtc
     2101 gtggacgtcc ccggcgtgtc gatggagctc tgcggcggca cccacgtgcg caacacggcg
     2161 gagatcgggc tgctcgtgct ggt
//
LOCUS       DASSYW010001159         2398 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_901707, whole genome shotgun sequence.
ACCESSION   DASSYW010001159 DASSYW010000000
VERSION     DASSYW010001159.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2398)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2398)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2398
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_901707"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..642
                     /locus_tag="VFN38_18260"
     CDS             <1..642
                     /locus_tag="VFN38_18260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013777.1"
                     /translation="YALKITTGKWYTPSGRSIHRERKLLADGRFVETRPDSLETEAQK
                     KARPRFSSDAGRTVYGGGGITPDVIVPDDTLLTAEQEFLRSMAPKAQAFVTVLNQYAL
                     DLRPTAARDFTIAPAWRAELRRRLAAAAITIDAKHEPAATRILDRELDRRLSRLVLGD
                     AGARQRSVAEDHQLARALALLSGARSQEALFAAGRASAGMATTVNAAVQPDHD"
     gene            656..1264
                     /locus_tag="VFN38_18265"
     CDS             656..1264
                     /locus_tag="VFN38_18265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013778.1"
                     /translation="MGAEAKATLKVGRQSYEGTAMLESDELRFRGDTRMRIALRDVSA
                     VNATGGTLRVEHANGIASFVLGDAAEAWAEKIRSPRTLADKLGVKRGMRVAVIDVDER
                     EILDDLTAKGAELVLGSVPQDAPMVIVRVVRPSQLATLGAMTERIARNGAIWVVHPRG
                     DATVADTVIFAAARDAGLTYTKVVRFSDRDTAEKLVIPRTAR"
     gene            1298..2020
                     /locus_tag="VFN38_18270"
     CDS             1298..2020
                     /locus_tag="VFN38_18270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013779.1"
                     /translation="MSEPSVASAAADPTITAHALVVPRTARYYTLGPTHGFPRELWFV
                     CHGYGQLAGRFLRQFAPLDDGSRLVVAPEGLSRFYLDPIPQRRNDPSPRIGATWMTRE
                     DRDAEIADYVEYLERLSSEVRHPLRGAAPRLVVLGFSQGTATVCRWLAASDLRVDHLV
                     LWGGTIPPELDLAHWSSRLHGAAITLVAGERDELATPAAMTTEAERLSAAGVAFTLQR
                     HGGAHAIDPVALLHLAEGFAGH"
     gene            complement(2028..>2398)
                     /locus_tag="VFN38_18275"
     CDS             complement(2028..>2398)
                     /locus_tag="VFN38_18275"
                     /inference="COORDINATES: protein motif:HMM:NF013633.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="S4 domain-containing protein"
                     /protein_id="HET9013780.1"
                     /translation="WLWAARFFKTRALAVDAIGGGKVLLGGERVKPAKLLQVGDEVRV
                     RLGPYEHVVIVRAVSERRGPAAVAATLYEETAQSQGARAKLAEQLRMAPAAFVYEEKG
                     RPTKRDRRDIERLRDERRHD"
BASE COUNT          345 a          876 c          824 g          353 t
ORIGIN      
        1 tacgcgctga agatcacgac gggcaagtgg tatacgccaa gcggccgcag catccatcgc
       61 gagcgcaagc tgctcgctga cggccgcttc gtcgagacgc gccccgactc gctcgagacg
      121 gaagcccaga agaaagctcg ccctcgcttc tcctccgacg ccggccgcac ggtctacgga
      181 ggcggtggca tcacgcccga cgtcatcgtg cccgacgaca cgctgctcac cgccgagcag
      241 gagttccttc gctccatggc cccgaaggcg caggcgttcg tgacggtgct caaccagtac
      301 gcgctcgacc tgcgtccgac cgccgcccgg gacttcacga tcgcgccggc gtggcgcgcg
      361 gagctgcggc gtcgactcgc ggcggccgcc atcacgatcg acgcgaagca tgagcctgcg
      421 gccacgcgca ttctcgaccg cgagctcgat cgccgcctga gccggctcgt gctcggcgac
      481 gccggcgcgc gacagcgttc cgtcgcggag gatcaccagc tcgcacgtgc gctcgcgctg
      541 ctctcggggg ctcgctcgca ggaagcgctc ttcgccgccg gtcgcgcgtc ggcgggcatg
      601 gcgaccaccg tcaatgcggc ggtgcagccg gatcacgact gatcggaggc tctccgtggg
      661 cgccgaggcc aaggctacgc tgaaagtcgg gcggcagtcg tacgaaggca ccgccatgct
      721 cgagtccgac gagctgcgtt ttcgcggcga cacgcgcatg cgcatcgctc tgcgcgacgt
      781 gagcgcggtg aacgcgaccg gcgggacgct gcgcgtggag cacgcgaacg gcatcgcgtc
      841 attcgtcctc ggcgacgccg ccgaagcctg ggcggagaag atccgctctc cgcgcaccct
      901 ggcggacaag ctcggcgtga agcgcgggat gcgggtcgcc gtgatcgatg tcgacgagcg
      961 cgagatcctg gacgacctga ccgcgaaggg cgccgagctc gtgctcggga gcgtaccgca
     1021 ggatgcgccg atggtgatcg tccgcgtggt ccggccgtcc cagctcgcca ccctgggggc
     1081 aatgacggag cggatcgcgc gcaacggagc gatctgggtg gttcatccgc gcggtgacgc
     1141 gacggtggcc gacaccgtga tcttcgcggc ggcgcgtgac gccggcctca cgtataccaa
     1201 ggtggtgcgc ttctccgacc gggacacggc ggagaagctc gtcatcccgc gcacggcgcg
     1261 ttgagcatcc agggaccgcc acccgacaca cacgacaatg tcagaacctt ccgtcgccag
     1321 cgccgccgct gacccgacga tcactgcaca tgcgctcgtc gttccgcgaa cggcacggta
     1381 ctacacgctc ggccccacgc acggcttccc ccgcgagctg tggttcgtct gtcacggcta
     1441 cgggcagctg gccgggcgct tcctgcggca gttcgcaccg ctcgacgacg gctcgcgcct
     1501 cgtcgtcgcg ccggaagggc tctcgcgctt ctacctggac cccattccgc agcgacgcaa
     1561 cgatccgtcg ccgcggatcg gcgccacgtg gatgacgcgc gaggatcgcg acgccgagat
     1621 cgccgactac gtcgagtatc tcgagcgcct ctcgtcggag gtccggcatc cgttgcgcgg
     1681 ggccgcgccg cggctcgtgg tgctgggatt ctcgcagggc acggcgacgg tgtgccgctg
     1741 gctcgccgcg agcgacctgc gcgtcgatca cctcgtgctg tgggggggga cgatcccacc
     1801 ggagctcgac ctcgcgcact ggtcgtcacg cctgcacggc gcggccatca ccctcgtggc
     1861 gggtgagcgg gacgagctcg cgacccccgc ggccatgacg acggaagccg aacgcctttc
     1921 cgcggcgggc gtcgccttca ccctgcagcg tcacggcggc gcacacgcga tcgatccggt
     1981 ggcgctcctg cacctggccg agggcttcgc cggccactga gcgcgcgtca gtcgtgacgg
     2041 cgctcgtcgc ggagtcgttc gatgtcgcgc cgatcccgct tcgtcggtcg gcctttttcc
     2101 tcgtacacga acgccgcggg cgccatgcga agctgttcgg cgagcttcgc gcgcgccccc
     2161 tggctctgcg cggtttcctc gtagagggtg gcggcaacgg ccgcgggtcc gcgccgttcg
     2221 gagaccgcgc gcacgatcac cacgtgctcg tacggaccga gccggacacg gacctcgtcg
     2281 cccacctgga gcagcttcgc cggcttcacc cgctcaccgc ccaggagcac cttgccgcct
     2341 ccgatcgcgt cgacggcgag cgctcgcgtc ttgaagaagc gggcggccca cagccact
//
LOCUS       DASSYW010001160         3995 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_326442, whole genome shotgun sequence.
ACCESSION   DASSYW010001160 DASSYW010000000
VERSION     DASSYW010001160.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3995)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3995)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3995
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_326442"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1223)
                     /locus_tag="VFN38_18280"
     CDS             complement(<1..1223)
                     /locus_tag="VFN38_18280"
                     /inference="COORDINATES: protein motif:HMM:NF019592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RagB/SusD family nutrient uptake outer membrane
                     protein"
                     /protein_id="HET9013781.1"
                     /translation="MLDRIRSARPLALVAGAVLAVVTACGNPLEVETTSRIPAENIEI
                     PANAQLLVSGSIADFECAFAAYVVQSATVGEEFIYAQQTADRVPSDRRSTLPTDGRYA
                     TNSCVGLGIYTPLQTARQSSETALNYLKSWSDAEVANRTKLIAYTSAYAGYSYLLMGE
                     GFCTLAFSSINPDRSIAYGGEVSRDSAFKLAIARFTESIAAAQAVPNPTAGVTDSLRL
                     AYLGRARARLNLGDYAGAKADAQQIPAGYVRNATYSTAVSRRSNFVFDDNSAANISSS
                     VGEPYRSMAGDPRVPVTQGTSTSATGIRHWYQSKYTSSAAPIPFAKYQEAQLIIAEAE
                     IRSNNLPAALPILNAERARGNQGVFVGVTQADYLAELVSQRRRELFLEGQHLGDIIRY
                     NIPVQPVAGTPYHFGG"
     gene            complement(1263..>3995)
                     /locus_tag="VFN38_18285"
     CDS             complement(1263..>3995)
                     /locus_tag="VFN38_18285"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HET9013782.1"
                     /translation="QARREIGNAVSTVNATEVTERGTINNVQQLLNGRSPGVFVNPAT
                     GNVGTGARIRIRGASSLSLSNEPLIYIDGVRSNNQAASGPVNQGFGSSSISRINDINP
                     DDIESIEIIKGPAAATLYGTEASNGVVQIITKKGAAGRPRWNFSTRLGTNYFQDPADR
                     FRINYFPIPRPGGPAGALDTVSINLIALEDARGTPVFTHGRIGEFDLSTSGGSDLARY
                     FAGLGLEDSKGMEPVNGVKRRTGRLNVNVVPSSSLDLGFNVGYTNGNITLPCEAGCGG
                     RTLGVVNANPLNLVPLANGQPNPRRGFNSGLPTQYDAFYEFYQIVDRFTGGIQANQQL
                     ASWLKHRINFGVDRTREENSELGRRTEDSLTKALLGTSGLGYRDMTFRTINNYTADYS
                     LAGTVDLPRALRSTTSAGAQYYRNYYERTCAAGSQFPAVGVTTVDATTTGRSTCQDVE
                     EDATVGLFAQEQIGWNDKLFVTAALRADDNSAFGRNFDRVYYPKFSLSYIPIEGADSR
                     IPYVNALKLRAAYGESGKQPITFSALQAYASATGPGDVPAVTPSTIGNPDLGPERSKE
                     VELGFDLGAFNDRAGAEVTYYRKRTVDAILDRQIAPSIGIPGTQPFNVGSIRNSGLEL
                     ALRGRPIEMKNVEWDVSVSYATNDNKIENLGTPASVLELRRQTSCPGYVPGTSNPDSC
                     PVADFVVVASGLAPRHQVGYPIGSYFIPKIATATVNANGTVSGVLCDDGKGGTIACAS
                     APALFAGRTTPRVEGAVTNSFTLFKSLRLSGLVDFKRDYVKVDGSQRFRCVINRRCHE
                     WYYPQEYDPKYIASLKAGTDVLPEGYVKDASYVKLREISVSYELPENLNRFGRFSRAV
                     IGLAGRNLHTWTSYPGLDPEAFFLGGSRGGNFSLFDQTTNPQATQWVVSLNLGW"
BASE COUNT          554 a         1267 c         1482 g          692 t
ORIGIN      
        1 ccaccgaagt ggtacggcgt gcccgcgacc ggctgcaccg ggatgttgta gcggatgatg
       61 tctccgaggt gttgcccttc gaggaacagc tcgcggcggc gctggctcac cagctccgcg
      121 aggtaatccg cctgcgtgac gccgacgaac accccctggt tgccgcgtgc gcgctcggcg
      181 ttcaggatcg gcagggccgc cggaaggttg ttgctgcgga tctccgcctc ggcgatgatg
      241 agctgcgcct cctggtactt ggcgaatggg atgggggcgg cggagctcgt gtacttggac
      301 tggtaccagt gccggatgcc cgtggcgctc gtcgacgtgc cctgcgtcac cggaacgcgt
      361 ggatcgccgg ccatgctgcg gtacggctcc ccgacggagc tcgagatgtt cgccgccgaa
      421 ttgtcgtcga agacgaagtt cgagcgccgg ctcaccgcgg tggagtacgt ggcgttccgc
      481 acgtagcccg ccgggatctg ctgcgcgtcg gccttggcgc cggcgtagtc tccgaggttc
      541 agccgggcac gcgcccggcc gaggtaggcc agccggaggc tgtcggtcac gccggccgtc
      601 ggattcggca ccgcctgggc cgcggcgatg gattcggtga agcgcgcgat ggcgagcttg
      661 aaggcgctgt cgcgcgagac ctcgccccca tacgcgatcg agcggtccgg gttgatcgac
      721 gaaaaggcca gcgtacagaa gccctcgccc atcagcaggt acgagtagcc ggcgtaggcc
      781 gaggtgtagg cgatcagctt ggtgcgattg gccacttcgg cgtcgctcca gctcttcagg
      841 tagttgagcg ccgtctcgga cgactggcgc gcggtctgga ggggcgtgta gatgcccagg
      901 ccgacgcagc tgttggtggc gtagcggccg tcggtgggca gcgtgctgcg ccggtccgac
      961 ggcacgcggt cggccgtctg ctgggcgtag atgaactcct cgcccaccgt ggcgctctgc
     1021 acgacgtacg cggcgaacgc gcactcgaag tcggcgatcg agccggagac gagcagctgg
     1081 gcgttcgcgg ggatctcgat gttctcggcg ggaatgcggc tcgtcgtctc cacctcgagc
     1141 ggattgccgc acgcggtgac gacggcgagc acggcgccgg ccacgagggc caggggacgc
     1201 gcgctgcgga ttctatcaag catcggggtc agctctcgag ttgttgggtg gcgtcgcatc
     1261 ggttaccagc cgaggttcag gctgacgacc cactgcgtgg cctgcggatt ggtcgtctgg
     1321 tcgaacagcg agaagtttcc gccgcggctg ccgccgagga agaacgcttc cggatcgaga
     1381 ccgggatagc tcgtccaggt gtgcaggttg cggccggcca gcccgatcac cgcccggctg
     1441 aaccggccga agcggttgag gttctccggc agctcgtacg agacgctgat ctcgcgcagc
     1501 ttcacgtagc tcgcgtcctt cacgtacccc tcgggcagca cgtcggtgcc cgccttcagg
     1561 ctggcgatgt acttcgggtc gtactcctgc gggtagtacc actcgtggca gcggcgattg
     1621 atgacgcagc ggaaccgctg gctgccgtcg accttcacgt agtcgcgctt gaagtccacg
     1681 agcccggaga ggcgcaggct cttgaacagc gtgaaggagt tcgtcaccgc cccttccacg
     1741 cggggcgtgg tgcggccggc gaacagcgcc ggcgcgctgg cgcaggcgat cgtgccgccc
     1801 ttgccgtcgt cgcagaggac gccgctcacg gtgccgttcg cgttcaccgt ggcggtggcg
     1861 atcttcggga tgaagtagga gccgatcggg tagcccacct gatggcgcgg ggcgaggccg
     1921 ctggcgacga cgacgaagtc cgccaccggg cagctgtcgg gattcgatgt gccgggcacg
     1981 tagcccgggc acgacgtctg gcgccggagc tcgagcaccg acgcgggggt gccgaggttc
     2041 tcgatcttgt tgtcgttcgt cgcgtagctg acgctcacgt cccactcgac gttcttcatc
     2101 tcgatcggcc ggccgcgcag cgcgagctcg aggccggagt tgcggatgga gcccacgttg
     2161 aagggctgcg tgccggggat cccgatggac ggcgcgatct gccggtcgag gatcgcgtcc
     2221 accgtgcgct tccgatagta cgtcacctcg gcgccggcgc gatcgttgaa cgcgccaagg
     2281 tcgaagccga gctccacttc cttgctccgc tcggggccga ggtcggggtt gccgatcgtg
     2341 ctcggcgtca ccgccggcac gtcgcccggt ccggtggcgc tcgcgtacgc ctgcagcgcc
     2401 gagaaggtga tgggctgctt gcccgactcg ccgtacgcgg cgcgcagctt gagcgcattc
     2461 acgtagggaa tgcgcgagtc ggcgccctcg atcgggatgt agctgaggct gaacttcggg
     2521 taatacacgc ggtcgaagtt gcgtccgaag gcgctgttgt cgtcggcgcg cagggccgcc
     2581 gtgacgaaca gcttgtcgtt ccagccgatc tgctcctgcg cgaacaatcc gacggtcgcg
     2641 tcctcctcga cgtcctggca ggtcgagcgg cccgtcgtcg tcgcgtccac cgtggtgacg
     2701 ccgacggcgg ggaactgcga gcccgccgcg caggtgcgct cgtagtagtt gcggtagtac
     2761 tgcgcgccgg ccgaggtcgt ggaccgcagg gcgcgcggca ggtcgacggt gccggcgagg
     2821 gagtagtcgg ccgtgtagtt gttgatcgtg cggaaggtca tgtcgcgata ccccagcccc
     2881 gaggtgccga ggagcgcctt ggtgagcgag tcctcggtgc gccggcccag ctcactgttc
     2941 tcctcgcgcg tccggtccac cccgaagttg atgcggtgct tcagccagga ggcgagctgc
     3001 tggttcgcct ggatgccgcc ggtgaagcgg tcgacgatct ggtagaactc gtagaacgcg
     3061 tcgtactggg tggggaggcc gctgttgaag ccacggcgcg ggttcggctg gccgttggcg
     3121 agcgggacga ggttgagggg gttcgcgttc accacgccca gggtgcgccc gccgcagccg
     3181 gcttcgcagg gcagggtgat gttgccgttg gtgtagccga cgttgaaccc gaggtcgagc
     3241 gacgagctgg ggacgacgtt cacgttcagc cggcccgtgc ggcgcttcac gccgttcacc
     3301 ggctccatcc ccttgctgtc ctcgaggccc agcccggcga agtagcgggc caggtcggag
     3361 ccgccgctgg tggagaggtc gaactccccg atgcggccgt gcgtgaacac cggggtgccg
     3421 cgcgcgtcct cgagcgcgat gaggttgatg gacaccgtgt ccagcgcgcc ggcgggcccg
     3481 cccggccggg ggatcgggaa gtagttgatg cggaagcggt cggccgggtc ctggaagtag
     3541 ttggtgccga gccgggtgga gaagttccag cgcggccggc cggcggcgcc cttcttcgtg
     3601 atgatctgca ccacgccgtt ggacgcctcg gtgccgtaca gcgtcgccgc ggcgggaccc
     3661 ttgatgatct cgatcgactc gatgtcgtcc gggttgatgt cgttgatgcg cgagatcgac
     3721 gacgacccga agccctggtt caccgggccc gacgccgcct ggttgttgga gcgcacgccg
     3781 tcgatgtaga tgagcggctc gttcgacagc gacaggctcg atgcgccgcg gatgcggatg
     3841 cgggcgccgg tgcccacgtt gcccgtggcc gggttgacga acacgcccgg ggagcggccg
     3901 ttgaggagct gctgcacgtt gttgatcgtg ccgcgctcgg tcacctcggt ggcattcacc
     3961 gtggacaccg cgttgccgat ctcgcgccgc gcctg
//
LOCUS       DASSYW010001161         2092 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_492524, whole genome shotgun sequence.
ACCESSION   DASSYW010001161 DASSYW010000000
VERSION     DASSYW010001161.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2092)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2092)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2092
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_492524"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(156..683)
                     /locus_tag="VFN38_18290"
     CDS             complement(156..683)
                     /locus_tag="VFN38_18290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013783.1"
                     /translation="MRRASKPSPGLFRPLASIGLGVGANAAIFSLADALFLRPLDVPE
                     PSRLVTVGTRPWRNDGLQSMADYMDFRDANRSFENVAAVRIVRAGARNSEAPAELRMG
                     FAVSANFLRAFGVRPEAGLAGGRGLTVSLGAPSFDPVLFTLMPIALLATTLLAAAIPA
                     KRAASIDPQRALRHD"
     gene            747..>2092
                     /locus_tag="VFN38_18295"
     CDS             747..>2092
                     /locus_tag="VFN38_18295"
                     /EC_number="3.5.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019213 - deacetylase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PIG-L family deacetylase"
                     /protein_id="HET9013784.1"
                     /translation="MRTRAAVLLATLVGVAISVQGPAGAQVRPIYDMGAAGLVQLLER
                     LQTTASVLHTGAHPDDEDSSFIARMARGDHARTAYLSLNRGEGGQNIIGTELFDALGV
                     IRSEELLQARRLDGGEQFFTRSFDYGFSKTRAEAAAKWDEQIVLGDMVRVIRTFRPFV
                     IYARFSGTPQDGHGQHQMAGHLTPLAFRAAADASQFPEQIAEGLRPWQAKKLYRGSPF
                     RVDPENPPTINVQTGIVDAALGRTYAEIASEGRSQHKSQEMGGIEPMGPAASGLVRLS
                     PATAGPNAPLERSVFDGIDVSLPGLAAAAGLPEGALRAELAAVETAAREALATYQPLD
                     PSRLVPPLAAGLTATRAARRALQALEAGRDAKADADFLLSLKERDFADALVRAAGVVV
                     DPLSDAETVTPGGVLTVSARTFLPYPGIVTITNTALRAPAGWRVAPAPPPASANNQG"
BASE COUNT          323 a          726 c          757 g          286 t
ORIGIN      
        1 tgaagcggac ggaaggagtt gtagccccag aagcgggtga gcgcttcacg aagcgcttca
       61 gcggacatgc acgcttagtg tagatggctt aaggcttagg acttaaggct taagcctgcc
      121 taggccctaa gccataagcc ctaagccgac aagaatcaat cgtgccgcaa cgcgcgctgc
      181 ggatcgatcg acgccgcgcg cttcgcgggg atcgctgccg cgagcagcgt cgtggccagc
      241 agcgcgatcg gcattagcgt gaagagcacg gggtcgaacg acggtgcccc gagcgacacg
      301 gtcaagccgc ggccgccggc gaggccggcc tcgggccgga cgccgaacgc gcgcaggaag
      361 ttcgcggata ccgcgaatcc catccgcagc tccgccggcg cttcgctgtt gcgggccccg
      421 gcccggacga ttcgaacggc cgccacgttc tcgaacgacc ggttcgcgtc gcggaaatcc
      481 atgtagtccg ccatcgactg caggccgtcg ttgcgccacg gccgggtacc gaccgtgacg
      541 aggcgcgacg gctcggggac gtcgagcggc cgcaggaaaa gggcgtccgc gaggctgaag
      601 atggcggcgt tggcgcctac cccaaggccg atcgaggcga gaggacggaa aaggcccggg
      661 gacggtttgc tggcccggcg catcaccgtc cggaggtggg acggccccgc ccggccgcgg
      721 acaccggctc tgatatcctc gacccgatgc gaacccgggc ggcggtcctc cttgcgacgc
      781 tcgtcggcgt ggcgatttcc gtacagggcc cggccggggc gcaggtgcgg ccgatctacg
      841 acatgggcgc cgccgggctc gtgcagctcc tcgagcggct gcagaccacc gccagcgtgc
      901 tccacaccgg cgcccatccc gacgacgagg attcgagctt catcgcccgc atggcgcgcg
      961 gcgaccacgc gcgcaccgcg tacctgtcgc tcaatcgcgg cgaaggcggc cagaacatca
     1021 tcggcaccga gctcttcgac gcgctcggcg tgatccgctc cgaggagctg ctgcaggcgc
     1081 ggcgcctcga cggcggcgag cagttcttca cgcgctcgtt cgactacggc ttctcgaaga
     1141 cgcgcgccga ggcggcggcc aagtgggacg agcagatcgt gctcggcgac atggtgcgcg
     1201 tgatccgcac gttccgcccc tttgtcatct acgcgcgctt ctcgggcacg ccgcaggacg
     1261 gccacggcca gcaccagatg gccgggcacc tgacaccgct cgcgttcagg gcggcggcgg
     1321 atgcgtcgca gtttcccgag cagattgccg aagggctgcg gccgtggcag gcgaagaagc
     1381 tctatcgcgg ctcgccgttc cgagtcgatc ccgagaatcc gccgaccatc aacgtccaga
     1441 ccggcatcgt cgacgcggcg ctggggcgca cctacgcgga gatcgcgtcg gaagggcgca
     1501 gccagcacaa gtcgcaggag atgggcggca tcgagccgat ggggccggcg gcctcgggcc
     1561 tcgtgcgatt gtcgccggcg acggcaggtc cgaacgcacc gctggagcgg tcggtgttcg
     1621 acggcatcga cgtttcgttg ccggggctgg cggctgcagc gggcctgccc gagggggcgt
     1681 tgcgcgccga actggccgcg gtcgaaacgg ccgcgcgcga ggcgctggcc acctatcagc
     1741 cgctcgatcc gtcgcgtctc gtgccgccgc tggccgcggg tctcacggcg acgcgcgccg
     1801 cgcggcgcgc cctgcaggcg ctcgaggccg gccgtgacgc gaaggccgac gcggatttcc
     1861 tgctctcgct gaaggagcgc gatttcgccg acgccctcgt gcgggcggcc ggcgtcgtgg
     1921 tcgatccgtt gagcgacgcg gagacggtga cgccgggcgg cgtgctcacc gtgtcggcac
     1981 gcacgttcct tccgtacccg ggcatcgtca cgatcaccaa caccgcgctg cgcgcgccgg
     2041 cgggctggcg agtggcgccg gcgccgccgc ccgccagcgc aaacaatcag gg
//
LOCUS       DASSYW010001162         2687 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_971530, whole genome shotgun sequence.
ACCESSION   DASSYW010001162 DASSYW010000000
VERSION     DASSYW010001162.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2687)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2687)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2687
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_971530"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..432)
                     /locus_tag="VFN38_18300"
     CDS             complement(<1..432)
                     /locus_tag="VFN38_18300"
                     /inference="COORDINATES: protein motif:HMM:NF014618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional nuclease family protein"
                     /protein_id="HET9013785.1"
                     /translation="MLIEMTIKGLVVDSFSSTPIVILKDKAGDKVLSIWVGIYEANAI
                     AQQIENVTMPRPMTHDLLRNLINDLGGKVDRVVVTDLRENTFFASVIVEHEAQVLSID
                     ARPSDSIALALRAKAPIYVNEALLQPAPVEEAPLEEGSEARP"
     gene            complement(426..1823)
                     /gene="miaB"
                     /locus_tag="VFN38_18305"
     CDS             complement(426..1823)
                     /gene="miaB"
                     /locus_tag="VFN38_18305"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR01574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016782 - transferase activity,
                     transferring sulphur-containing groups [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HET9013786.1"
                     /translation="MNRRRYLIETFGCQMNVHDSERMAGLLEQAGYERAATDADADVV
                     VINTCSVREHAEEKLYTRLGELRVLGEETGRERVVAVAGCVAQQEGDALFKKTNGHLI
                     DVVLGTHRLKQLPGLLQQAAHSRDVGRPTIDVARFDDVTFPVGVTRRGDAVRAYVTII
                     EGCNDHCAFCVVPTTRGHERMRPKADILLDVQEAVASGRKEVQLLGQIVNHYQAPDDP
                     GCDFAQLLAEVDAVPGIERIRFASPHPRHTGARVIEAVRDLPRVCKHMHLPLQSGSTE
                     VLRRMRRRHTREEYLELVGRIRHAIPGVTLSTDLIVGFPGETARDFDDTMTLVEAVRY
                     HSIFSFKYSERPNTLAARRMPDDVPEAEKTARIVALQSRQREIQSALHAASVGQVVDV
                     LVDSVSRRREGELSGRTGGNTVVNFPVPGGAQADPDLWLGRTVPILVTRAGPNSVAGE
                     LAAPEAAVPAGAVTC"
     gene            complement(1820..>2687)
                     /locus_tag="VFN38_18310"
     CDS             complement(1820..>2687)
                     /locus_tag="VFN38_18310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013787.1"
                     /translation="EDRLARIERLKRKYGPTLDDVVAKGQALRAEAGRLMGGDGEAGD
                     LERQLADASTAFLVAARELSRARREAAVPFARSLKALLADLAMAETRFDVRFESTESD
                     PERWDAQGLDRVEFFVSPNPGEDPRPLARVASGGELSRIMLALRTHGTRRPARAAGTP
                     AEPGRNTLIFDEVDAGIGGRAAEAVGALLGELGRRYQVLCITHLAPIAARATTQCAVE
                     KRVTGGRTVTVVTSLSQDQRVDELSRMLAGSRASDATRASARELLGGAGSAGAKVKQG
                     AKGESESRRPRA"
BASE COUNT          365 a         1007 c          883 g          432 t
ORIGIN      
        1 cgggcgcgcc tcgctgccct cctcgagcgg cgcctcctcc accggggcgg gctgcagcag
       61 ggcctcgttc acgtagatcg gcgccttggc acgcagcgcc agggcgatcg agtccgacgg
      121 gcgcgcgtcg atcgacagca cctgggcttc gtgctcgacg atgacgctgg cgaagaaggt
      181 gttctcgcgc aggtccgtca ccaccacgcg atcgaccttg ccgcccagat cgttgatcag
      241 gttccgcagc aagtcgtgcg tcatcggccg cggcatcgtg acgttctcga tctgctgcgc
      301 gatggcgttc gcctcgtaga tgccgaccca gatcgacaac accttgtcgc cggccttgtc
      361 cttcaggatc acgatcggcg tgctcgagaa cgagtccacg accaggccct tgatggtcat
      421 ctcgatcagc atgtgacggc tcccgcgggg acggcggcct cgggcgcggc aagctctcct
      481 gccacgctgt tcggaccggc ccgcgtcact agtatcggca cggtacgccc cagccacaag
      541 tccgggtccg cctgggcccc gcccggcacg gggaagttca ccaccgtgtt gccgcccgta
      601 cggcccgaca gctcgccttc gcgacggcgg ctcaccgagt ccacgagcac gtccaccacc
      661 tgccccaccg acgccgcgtg cagcgcgctc tggatctcgc gctgccgcga ctgcagcgcc
      721 acgatgcggg cggtcttctc cgcttcgggc acgtcatccg gcatccgcct ggcggcgagc
      781 gtgttcggcc gctccgagta cttgaacgag aagatgctgt ggtagcgaac ggcttccacg
      841 agcgtcatcg tgtcgtcgaa gtcccgcgcg gtctcgcccg gaaacccgac gatgagatcc
      901 gtggacagcg tcacgccagg gatcgcgtgc cgaatccgcc cgaccagctc caggtactcc
      961 tcgcgcgtgt gccggcggcg catgcgccgc agcacctccg tggaccccga ctgcaacggc
     1021 aggtgcatgt gcttgcagac gcgcggcagg tcgcgcacgg cctcgatgac gcgcgcgccg
     1081 gtatgccgcg ggtgcgggct cgcgaagcgg atgcgctcga tcccgggaac cgcgtccact
     1141 tcggcgagga gctgcgcgaa gtcgcacccc ggatcgtccg gcgcctgata gtggttgacg
     1201 atctgcccga ggagctgcac ttccttccgc cccgacgcga ccgcctcctg gacgtcgagc
     1261 aggatgtcgg ccttcgggcg catgcgttcg tgcccgcgcg tggtcggcac cacgcagaac
     1321 gcgcagtggt cgttgcaccc ttcgatgatg gtcacgtagg cgcgcacggc gtcgcctcgc
     1381 cgtgtcacgc ccaccgggaa cgtgacgtcg tcgaagcgcg cgacgtcgat tgtcggccgg
     1441 ccgacatcgc gcgagtgcgc cgcctgttgc aggagcccgg gcagctgctt caagcgatgc
     1501 gtgccgagca cgacgtcgat cagatggcca ttggtcttct tgaagagcgc gtcgccttcc
     1561 tgctgcgcca cacagcccgc cacggccacc acgcgctcgc ggccggtctc ttcaccgagc
     1621 acgcgcagct cgccgagccg cgtatagagc ttctcctcgg cgtgctcgcg cacgctgcac
     1681 gtgttgatga ccacgacgtc ggcgtcggcg tcggtcgcgg cgcgctcgta gcccgcctgc
     1741 tccagcagac ccgccatgcg ctcggagtcg tggacgttca tctgacagcc gaacgtctcg
     1801 atcagataac ggcggcgatt catgcccggg gcctccgact ttcgctttcg cctttcgccc
     1861 cttgtttgac tttcgcccct gcgctgccgg cgcctccgag cagttcgcgg gcgctcgccc
     1921 gcgtggcgtc cgaggctctc gatccggcga gcatccgcga cagttcgtcc acgcgttgat
     1981 cttggctcag cgaggtcacc actgtcacgg tgcgtccacc cgtgacgcgc ttctccaccg
     2041 cgcactgcgt ggtggcgcgc gcggcgatcg gcgcgaggtg cgtgatgcac agcacctggt
     2101 agcggcggcc aagctcgccc agcagcgcgc ccacggcctc ggcagcgcgc ccgccgatgc
     2161 ccgcgtccac ttcgtcgaag atgagcgtat tgcgtcccgg ctcggccggc gtcccggccg
     2221 cgcgggcggg acgccgcgtg ccgtgggtcc gcagcgcaag catgatgcgc gacagctcgc
     2281 cccccgacgc gacccgcgcg agcggccgcg ggtcctcgcc cgggttgggc gacacgaaga
     2341 actccacgcg gtcgagcccc tgggcatccc atcgttcggg gtcgctctcg gtcgattcga
     2401 accgcacgtc gaaccgggtc tcggccatcg cgagatcggc gagcaacgcc ttcaggctcc
     2461 tcgcgaacgg gacggcggcc tcgcgccggg cacgcgagag ctcgcgcgcg gccaccagga
     2521 acgccgtgct cgcgtcggcc agctgccgct cgagatcgcc cgcctctccg tccccgccca
     2581 tgagccgccc ggcctccgcc cgcagcgcct gccccttggc caccacgtcg tcgagcgtcg
     2641 gaccgtactt ccgcttcagc cgctcgatgc gggcgagccg gtcctcg
//
LOCUS       DASSYW010001163         2087 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1708469, whole genome shotgun sequence.
ACCESSION   DASSYW010001163 DASSYW010000000
VERSION     DASSYW010001163.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2087)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2087)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2087
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1708469"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1021
                     /locus_tag="VFN38_18315"
     CDS             <1..1021
                     /locus_tag="VFN38_18315"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HET9013788.1"
                     /translation="DLIGLAQTGTGKTAAFTLPIIDRLIDGPRRTRALILTPTRELCV
                     QVEESFRKYAKHADIAVVAVYGGVPLDPQEKKLRAGVDVVVATPGRLIDHLERQNVVF
                     DDLEVLVLDEADRMLDMGFAPQINRVVSDIPKYRQTLLFSATMPPEVEALARKYLRKP
                     VVVQVGVRSAAASTVTHAVYPVPREKKNALLVELLTGKVHDSVLIFSRTKHGADRIVR
                     DLEKAGLKAEAMHADKSQAQRTRALQDFKDGKTTVLVATDIAQRGLDISGITHVINYD
                     VPQQAEDYVHRIGRTGRAAKEGDAYTFMSPDEIGMVRTIERMIGKPIPRVSVPGYDFG
                     TVAAD"
     gene            complement(1156..1596)
                     /locus_tag="VFN38_18320"
     CDS             complement(1156..1596)
                     /locus_tag="VFN38_18320"
                     /inference="COORDINATES: protein motif:HMM:NF023444.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015627 - type II protein secretion
                     system complex [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GspH/FimT family pseudopilin"
                     /protein_id="HET9013789.1"
                     /translation="MQRACVHFRCGYTLPELVLVVTIAGLASAIGARALARHLDRLAV
                     QAAVAEAAGALARARDEALARHAVVGVRIDTPRATVTLRARGARPVAYALGHAHGVSL
                     STTRDSLAFDARGLGYGAANLTLVARRGAAADTLVVSRLGRLRW"
     gene            1729..>2087
                     /locus_tag="VFN38_18325"
     CDS             1729..>2087
                     /locus_tag="VFN38_18325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013790.1"
                     /translation="MPSRFVTLLAAAALLAPALSPAQQANDSAYTARIRELTPTDSTW
                     KFTTELVDHLPASTTVPTPLKVLGYVPGTIARLAYVEELNRYFRAVEKASPRVKVFSM
                     GKTEEGREMIVAVVSDEA"
BASE COUNT          316 a          757 c          748 g          266 t
ORIGIN      
        1 ggatctcatc gggctggcac agaccggcac gggaaagacc gcggccttca cgctgccgat
       61 catcgaccgg ctgatcgacg gcccgcggcg cacgcgcgcg ctcatcctca cgccgacgcg
      121 cgagctgtgc gtgcaggtgg aggagagctt ccggaagtac gcgaagcacg ccgacatcgc
      181 cgtcgtcgcg gtgtacggcg gggtgcccct cgacccgcag gagaagaagc tgcgcgccgg
      241 cgtggacgtc gtggtggcaa cgccgggtcg gctcatcgac catctcgagc ggcagaacgt
      301 cgtgttcgac gacctcgagg tgctggtgct ggacgaggcg gaccgcatgc tcgacatggg
      361 cttcgcgccg cagatcaacc gggtcgtgag cgacatcccg aagtaccgcc agacgctcct
      421 gttcagcgcg acgatgccgc ccgaggtgga ggcgctggcg cgcaagtatc tgcgcaagcc
      481 cgtcgtcgtg caggtcggcg tccgctcggc cgcagcgagc acggtcaccc acgccgtgta
      541 tcccgtgccg cgcgagaaga agaacgccct cctcgtggag ctgctcaccg gcaaggtcca
      601 cgactcggtg ctgatcttct cgcgcaccaa gcacggggcc gaccgcatcg tgcgcgacct
      661 cgagaaggcc ggtctcaagg ccgaggcgat gcacgccgac aagagccagg cgcagcgcac
      721 ccgcgcgctc caggacttca aggacggcaa gacgaccgtg ctcgtcgcga cggacatcgc
      781 gcagcgcggg ctcgacatct ccggcatcac gcacgtcatc aactacgacg tgccgcagca
      841 ggcggaggac tacgtgcacc ggatcggccg caccggccgg gcagccaagg agggggacgc
      901 ctacaccttc atgtcgcccg acgagatcgg catggtgcgc acgatcgagc ggatgatcgg
      961 caagccgatc ccgcgcgtct cggtgccggg gtacgatttc gggacggtgg cagccgacta
     1021 atctcgaggc gtcgggcgcg gcgagcgccg cgcctgtcgc gcgaccgtca acgggacacc
     1081 ggatccacgt tcagcgtggc ccgtgtcccg ttcgccgttg gccctctcgc gtcctggggc
     1141 tcgcgcggcc ggctctcacc agcggagccg gccgagccgc gacaccacca gcgtgtccgc
     1201 ggccgcgccg cggcgcgcca cgagcgtcag gttggccgcc ccgtagccga ggccgcgcgc
     1261 gtcgaaggcg agggagtccc gcgtggtcga gagcgacacg ccgtgggcgt ggcccagcgc
     1321 atacgccacg gggcgggcgc cgcgggcccg cagggtgacc gtggcacggg gggtgtcgat
     1381 ccgcaccccc acgacggcgt gccgcgccag cgcctcgtcg cgcgccctgg cgagggcgcc
     1441 ggccgcctcg gcgacggcgg cctggacggc gagccggtcg agatggcgcg cgagcgcccg
     1501 cgcgccgatg gccgaggcca ggccggcgat ggtgacgacg aggacgagct cgggcagggt
     1561 gtagccgcag cggaagtgaa cgcacgcgcg ttgcatggga gcacggtcgc tctcggcggc
     1621 gcctcgtgcg gcaccgcagc gctgcgtccc ggggcgaatc gcgccgcccg gcgttgacgg
     1681 ccgcggcgcc ggcgccatct tcccgccctc ctttcccgcc gagccgacat gccgtcccga
     1741 ttcgtcaccc tcctggccgc cgcggctctc ctcgcgccgg cactctctcc cgcccagcag
     1801 gccaacgact cggcctacac cgcgcgcatc cgcgagctga cccctaccga ctcgacctgg
     1861 aagttcacca ccgagctggt ggaccacctg cccgcgtcga ccaccgtgcc cacgccgctg
     1921 aaggtgctcg gctacgtgcc cggcaccatc gcgcggctgg cgtacgtgga ggagctcaac
     1981 cgctacttcc gcgcggtgga gaaggcatcg ccgcgcgtga aggtgttctc gatgggcaag
     2041 accgaggagg gccgcgagat gatcgtggcc gtcgtctcgg acgaggc
//
LOCUS       DASSYW010001164         2633 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_381674, whole genome shotgun sequence.
ACCESSION   DASSYW010001164 DASSYW010000000
VERSION     DASSYW010001164.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2633)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2633)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2633
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_381674"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1151
                     /locus_tag="VFN38_18330"
     CDS             <1..1151
                     /locus_tag="VFN38_18330"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HET9013791.1"
                     /translation="TLALLSGAGLMARSFLKLYSLDLGVETDHVLSMRTQLVADKYPK
                     PEQRQLFFDRVQQRLRAIPGVSAVAVTTTLPLDGAGSFLFEIEGKPAASATARPRVLA
                     IDTSPSYFETMGAGILRGRGFTDADGVAGAEVVIVNQQLATRMFAAEDPLGRRIRLMT
                     GQNEDQPGPWLTIVGVSPTIRQGDVQALDPGAVVYRPYKLNSPMGAALVMRTTVDPAT
                     LTNAVREAARAIDADQPFFQVQPLNEGLARTRWPYRVFGTLFVIFAIIALVLSSVGIY
                     AITAYAVTQRTQEIGVRLALGAQPAQISWLILRSGLVQLAIGLVLGLLGAWGVSFVLR
                     SIVAQIPAVDPVTFVSITLLLVVVTISACLIPARRATRLDPLTALRID"
     gene            complement(1167..1778)
                     /locus_tag="VFN38_18335"
     CDS             complement(1167..1778)
                     /locus_tag="VFN38_18335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013792.1"
                     /translation="MRVLLLALLIACPLELRAQGRPDFRGAWTLNAELTVRPGQSAGD
                     GGQGVVRRTPIGGSGAPLGSGRGPAPLGDSYGGAREDEDEIARAREAARLAMLIPDRL
                     TITADRDTIVITDGEGVSQKLTTNGKPMRSSAGAIKVETKAKWEGATLVVERKFDAGV
                     KITERYAMTASPRRLTIAAKLENSTLRGDRTRTFERVYDTRTP"
     gene            1890..>2633
                     /locus_tag="VFN38_18340"
     CDS             1890..>2633
                     /locus_tag="VFN38_18340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013793.1"
                     /translation="MSLRASSVFVAFTLASGSGTALAQETREEALERTRREKAQALRP
                     YEAGKLEKWMLWFEDADPLGKIAPHDGFYLQYGFRWKPVGGGVGLGGGWRHDLFNRNA
                     RVVLGGGISTRNYQMVQADFSLPYLARHRVEVGGFAVYRHNPQEDYWGLGNDSLKDDR
                     VSFTVDYSNYEGRAIVRPVPWLEAGTRLGRLDTTIGEGTDTRFPSIEERFTDETAPGL
                     SAQPDFSYADVFAAVDYRDQEDNARDGGFY"
BASE COUNT          383 a          931 c          882 g          437 t
ORIGIN      
        1 tgacgctcgc gctcctcagc ggcgccgggc tcatggcgag gagcttcctc aagctgtact
       61 cgctcgacct gggcgtcgag accgatcacg tgctctcgat gcggacgcag ctcgtggccg
      121 acaagtaccc caagcccgag cagcgtcagc tcttcttcga tcgcgtgcag cagcgcctgc
      181 gtgcgatccc cggcgtctcg gccgtggcgg tgacgacgac gctgccgctc gacggcgccg
      241 gctcgttcct gttcgagatc gagggcaagc cggcggccag cgccacggcg cgcccgcgcg
      301 tgctcgccat cgatacgagc ccgagctact tcgagacgat gggcgcggga atcctgcgcg
      361 ggcgtggctt caccgacgcc gacggcgtcg ccggcgccga ggtcgtcatc gtcaaccagc
      421 agctggcgac gcggatgttc gccgccgagg acccgctcgg ccggcgcatc cggctgatga
      481 caggacagaa tgaggatcag cccgggccgt ggctgacgat cgtcggcgtc agcccgacga
      541 tccgccaggg tgacgtccag gcgctcgatc caggcgccgt cgtctacagg ccctacaagc
      601 tgaactcgcc gatgggcgcg gcgctggtga tgcggacgac ggtcgatccg gcgacgctga
      661 ccaacgcggt cagggaggcg gcccgcgcga tcgacgccga ccagccgttc ttccaggtgc
      721 agccgctcaa cgagggcctt gcccgcacgc gctggcccta tcgcgtgttc ggcacgttgt
      781 tcgtgatctt cgcgatcatc gcgctggtgc tgtcgtcggt cggcatctac gcgattaccg
      841 cgtacgccgt cacccagcgc acacaggaga tcggcgtccg gctggcactc ggggcgcagc
      901 ccgcgcagat ctcgtggctg atcctgcgga gcggcctggt gcagctcgcg atcggcctgg
      961 tcctcggtct gctcggcgcg tggggcgtca gcttcgtgct gcgctcgatc gtggcgcaga
     1021 ttcccgccgt cgatccggtg acgttcgtgt cgatcacgct gctcctggtc gtcgtgacga
     1081 tcagcgcctg cctcatcccg gcccggcgcg caacgcgtct cgatccgctc accgcgctgc
     1141 gcatcgactg atcgagcgcg gccggctcac ggcgtccgcg tgtcgtagac gcgctcgaac
     1201 gtccgggttc gatcgccgcg cagcgtgctg ttctcgagct tcgcggcaat cgtcagccgc
     1261 cgcggcgacg ccgtcatcgc gtagcgctcg gtgatcttga cgccggcgtc gaacttccgc
     1321 tcgacgacga gcgtcgcccc ttcccacttc gctttcgtct cgaccttgat cgcgccggct
     1381 gacgaccgca tcggctttcc gttcgtcgtc agcttctgcg acaccccttc gccatcggtg
     1441 atgacgatcg tgtcccggtc ggctgtgatc gtgaggcgat cggggatgag catcgccagc
     1501 cgcgccgctt cgcgtgcgcg cgcaatctcg tcctcgtctt cgcgtgcgcc accgtagctg
     1561 tcgccgagcg gcgccggccc gcggcccgaa ccgaggggtg cgcccgagcc gccgatcggc
     1621 gtgcgcctga cgaccccctg gccaccgtcg ccagcgctct gcccggggcg gacggtgagc
     1681 tcggcattga gcgtccaggc gccgcggaaa tccggacgcc cctgcgcgcg aagctcgagc
     1741 ggacaggcaa tcagaagcgc cagcagcagg actctcataa ccactctcgt ccacggtagt
     1801 ccaactgcgg cgcgcctgtc gacgtcgact cgagcgggac gccttcaacc ttgaacccgg
     1861 cgaaagccct gcgatatggt tccgagtcta tgtcgctccg cgcgtcctcc gtctttgtcg
     1921 catttaccct cgcctcgggg tccggcacgg ctctcgcgca ggagacgcgc gaggaggcgc
     1981 tcgaacggac gcgccgggaa aaggcgcagg cgctcagacc gtacgaagcg ggcaagctcg
     2041 agaagtggat gctgtggttc gaggacgccg atccgctcgg aaagatcgcg ccgcacgatg
     2101 gcttctatct tcagtacggt ttccgctgga agccggtggg cggcggcgtc ggcctcggcg
     2161 gcggctggcg gcacgatctg ttcaaccgca acgcccgcgt cgtgctcggc ggcggcatct
     2221 cgacgcgcaa ctatcagatg gtgcaggcgg acttctcgct gccatatctc gcccgccatc
     2281 gcgtcgaggt cggcgggttc gcggtctatc gccacaaccc gcaggaagac tactggggcc
     2341 tcggcaacga ctcgctgaaa gacgaccgcg tgagctttac ggtcgactac agcaactacg
     2401 aagggcgggc gatcgtccgg cccgtaccat ggctcgaagc cggcacgcgg ctgggacggc
     2461 tcgacaccac gatcggcgag ggcaccgaca cgcgcttccc gtcgatcgag gagcgcttca
     2521 ccgacgagac cgcacccggg ctctcggcgc agccggactt ctcgtacgcc gacgtgttcg
     2581 ccgccgtcga ctaccgcgat caggaggaca acgcgcgtga cggcgggttc tac
//
LOCUS       DASSYW010001165         5296 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1096428, whole genome shotgun sequence.
ACCESSION   DASSYW010001165 DASSYW010000000
VERSION     DASSYW010001165.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 5296)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5296)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5296
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1096428"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..978
                     /locus_tag="VFN38_18345"
     CDS             <1..978
                     /locus_tag="VFN38_18345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013794.1"
                     /translation="VLAAGLSILVASEAQAQTSCPGTVPTAATAPENSKQQASDVFQY
                     MAPQLAGAIAGGSPTLGQTSTLGGLGHFNVGVRGTALNGSLPKVDQFPTCYSGRYSAT
                     LPTGTQIMPGAGADAAIGVFGGLPLALTNVGAVDLLLSATYLPELDKNNVSVKLPDGS
                     LKIGYGARIGLLSESIVVPGVSLSYMKRDLPTVNLAANSGVADSLFVTGLKVKTTSWR
                     IEASKSLLVFGLFGGVGKDKYESSVEQIRASVGAPVIGRTSGTVNPTPQSLDRTNVFA
                     GVKLNLMIFKLAAEVGQSSGGDVTTFNSFAGSAANASRTYGSVGIRFGL"
     gene            1068..2177
                     /gene="ribD"
                     /locus_tag="VFN38_18350"
     CDS             1068..2177
                     /gene="ribD"
                     /locus_tag="VFN38_18350"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: protein motif:HMM:TIGR00326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA];
                     GO_function: GO:0008835 -
                     diaminohydroxyphosphoribosylaminopyrimidine deaminase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HET9013795.1"
                     /translation="MVDTMIETERPATPDDGAFMRRALALAARGWGQTAPNPMVGAVV
                     VRDGAVVGEGWHTRYGDAHAEVDALRAAGERARGATLYVTLEPCNHHGKTPPCTEAIL
                     GAGVRRVVAATADPNPVAGGGADRLRAAGLEVLVGTEQASARELNAAFFHALESDRPF
                     VQLKLALSLDGALADGTRRPGWLSGAGARGEVHRLRAGSDAVAVGIGTALADDPMLTV
                     RDVAPPRVPPVRIVFDTSARLPLDSRLVRSAREAPVLVVCWAPDPTHAAALEHAGVEL
                     LHAASLAHALRALRARGIRSVLAEGGAGLASALLQEAQVDRLIIFRAPILLGGGSLNA
                     FGGMPPATIDEAPRWRILESRRFGDDEMTVYTPPD"
     gene            2199..2798
                     /locus_tag="VFN38_18355"
     CDS             2199..2798
                     /locus_tag="VFN38_18355"
                     /EC_number="2.5.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR00187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HET9013796.1"
                     /translation="MFTGLIDDIGVVERVERTDAGRELRIRSRYTGLADGESVAVNGV
                     CLTVRESGAGWFDVAAIVTTLGRTTVGDWVVGQRVNLERAMRLGDRLGGHLVQGHVDD
                     VGIVEVQRREGDAILVDVRLPAELEPLMVPHGSVAVDGVSLTVNALPAPGILQLSLIE
                     FTARHTTLGGLRAGDRVNVEADMMGKYVRQLVAPYAAAR"
     gene            2821..4026
                     /locus_tag="VFN38_18360"
     CDS             2821..4026
                     /locus_tag="VFN38_18360"
                     /EC_number="3.5.4.25"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003935 - GTP cyclohydrolase II activity
                     [Evidence IEA];
                     GO_function: GO:0008686 -
                     3,4-dihydroxy-2-butanone-4-phosphate synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP
                     cyclohydrolase II"
                     /protein_id="HET9013797.1"
                     /translation="MPLNTVEQAVADIAAGKLIIVADDEDRENEGDLICAAQLVTPEL
                     VNFMIKRAGGLICVALAGERVDQLALPPMAESNPDEYRTAYTVSVDAAPRFGVTTGIS
                     AHDRATTIRTLVDPATVPGDLRHGGHVHPLRARDGGVLQRVGHTETAVDLARLAGVYP
                     AGVICEILNDDGSTAKRPQLEVFAREHGLTFITVAQLVAHRLKHERLVHRVAEARLPT
                     AYGTWTVFGYRNDVDDAEHVAIAYGEIGDGENVLVRMHSKCLTGDVFHSMRCDCGWQL
                     DTAMRMIQQEGRGVIVYLDQEGRGIGLLNKLKAYELQDQGADTVEANEQLGFAPDLRN
                     YGIGAQILLDLGLKSIRPITNNPRKMVGLEGYGLRVDERVPIVQPENTENAGYLGTKR
                     DKLGHLLAS"
     gene            4032..4511
                     /gene="ribH"
                     /locus_tag="VFN38_18365"
     CDS             4032..4511
                     /gene="ribH"
                     /locus_tag="VFN38_18365"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009349 - riboflavin synthase complex
                     [Evidence IEA];
                     GO_function: GO:0000906 - 6,7-dimethyl-8-ribityllumazine
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HET9013798.1"
                     /translation="MAEFNGVPNGEGRRYAVLASRFNNHVTSKLADGAMDALVRHGVA
                     SEDVDLVWVPGAWELPFAARRLAATNRYNALVVLGAVIRGDTPHFDFISAEASRGIMD
                     ASTEYDIPIGFGLLTCDTMEQAEARAGGEHGNKGWDAAIAALEMSDLFERLDGADEG"
     gene            4492..4917
                     /gene="nusB"
                     /locus_tag="VFN38_18370"
     CDS             4492..4917
                     /gene="nusB"
                     /locus_tag="VFN38_18370"
                     /inference="COORDINATES: protein motif:HMM:TIGR01951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HET9013799.1"
                     /translation="MARTRVETRARARALQALYAWDMRGNDRGELERVATQVWDDLSI
                     TADERRIAGPIVRVVASKGSALDDQLADVTTNWRLERIGAVERCVLRLAAAELTIGDT
                     PPRVVIQEAVTLAERFGSAASARFVNGVLDALARRMGRI"
     gene            4917..>5296
                     /locus_tag="VFN38_18375"
     CDS             4917..>5296
                     /locus_tag="VFN38_18375"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HET9013800.1"
                     /translation="MRLLLVNWQCRENPLAGGAEIHLHEIFGRLATRGHQVTLLCGGW
                     DGADPSTTLDGIDVMRVGTRYTFPFLARAAYRRRLADRPFDLLVEDVNKIPLATPRWG
                     GPPVVALVPHLFGGTAFQELAAPLA"
BASE COUNT          765 a         1830 c         1937 g          764 t
ORIGIN      
        1 gtcctcgccg ctggactctc gatcctcgtc gcgtcggagg cacaggcgca gacctcttgc
       61 ccgggcacgg tgccgaccgc agcgacggct cccgagaact ccaagcagca ggcgtccgac
      121 gtcttccagt acatggcgcc ccagctcgcc ggcgcgatcg ccggcggcag cccgaccctc
      181 gggcagacca gcaccctcgg tggcctcggc cacttcaacg tcggcgtgcg cggcaccgcg
      241 ctcaacggct cgctgcccaa ggtcgaccag ttcccgacct gctattcggg gcgctattcc
      301 gccacgctgc cgacgggcac gcagatcatg ccgggcgccg gcgcggacgc cgcgatcggc
      361 gtgttcggcg gcctgccgct ggcactgacg aacgtcggtg ccgtggacct gctgctcagc
      421 gcgacgtacc tgccggagct cgacaagaac aacgtgagcg tgaagctgcc ggacggctcg
      481 ctcaagatcg gctacggcgc gcgcatcggg ctgctctcgg agtcgatcgt cgtgcccggc
      541 gtgtcgctga gctacatgaa gcgcgacctg ccgacggtga acctcgcggc caattcgggc
      601 gtcgcggact cgctgttcgt cacggggctc aaggtcaaga ccacctcgtg gcggatcgag
      661 gcgagcaagt cgctgctcgt cttcggcctg ttcggcggcg tgggcaagga caagtacgag
      721 tcgtcggtgg agcagatccg cgcgtccgtc ggcgcgccgg tcatcggccg gacgagcgga
      781 acggtcaacc cgacgccgca gagcctcgac cgcacgaacg tgttcgccgg cgtgaagctc
      841 aacctgatga tcttcaagct ggcggccgaa gtcggacagt cgtccggcgg cgacgtcacg
      901 acgttcaact cgttcgcggg atcggcggcg aacgcgtcgc gcacctacgg ctcggtcggc
      961 atccgcttcg ggctctgacg ttcccttcac cccgcggacg cggcgcacgg gttcgcgtcc
     1021 gcgggaaagt gctgtagctt caccgggaca gcgctcacgg tgacgggatg gtggacacga
     1081 tgatcgagac cgagcggccg gccacgccgg acgacggcgc cttcatgcgc cgcgcgctcg
     1141 ccctcgccgc ccgaggatgg ggacagacgg cgccgaaccc gatggtcggc gccgtcgtcg
     1201 ttcgtgacgg cgccgtcgtc ggcgagggat ggcatacccg ctacggcgac gcgcacgccg
     1261 aagtggacgc gctgcgcgcc gccggcgagc gcgcgcgcgg cgcgacgctc tacgtgaccc
     1321 tggagccgtg caaccatcac ggcaagacgc cgccctgcac cgaggcgatc ctcggcgcgg
     1381 gcgtgcggcg cgtcgtcgcg gcgaccgccg atcccaatcc cgtcgcgggc gggggtgcgg
     1441 accgcctgcg ggccgcgggg ctcgaggtgc tcgtggggac ggagcaggcg tccgcgcgcg
     1501 agctcaatgc ggcgttcttc cacgcgctgg agagcgatcg gcccttcgtg cagctcaagc
     1561 tggccctctc gctggacggt gcgctggccg acggcactcg gcggccgggg tggctgagcg
     1621 gggcgggcgc ccgcggcgag gtgcatcggc tgcgggcggg aagcgacgcg gtggcggtgg
     1681 gcatcggcac ggcgctggcc gacgacccca tgctgaccgt acgcgacgtc gccccgcccc
     1741 gcgtaccgcc ggtgcgcatc gtgttcgaca cgtcggcccg gctgccgctc gactccaggc
     1801 tcgtgcggtc ggcgcgcgag gcgccggtgc tcgtcgtgtg ctgggcgccg gaccccacgc
     1861 atgccgcggc cctcgagcac gcgggcgtgg agctcctgca tgcggcctcg ctggcgcatg
     1921 cgctgcgggc cctgcgcgcc cgcggcatcc ggtcggtgct cgcggagggg ggcgcggggc
     1981 tggcgtcggc gctgctgcag gaggcacagg tcgatcgcct gattatcttt cgggcgccca
     2041 tcctgctggg gggcggatcg ctgaacgcct tcggcggcat gccgccggcc acgatcgacg
     2101 aggcgccacg gtggcggatc ctcgaatcgc gacgattcgg cgacgacgag atgacggtct
     2161 acacgcctcc tgattgagcg aggccggagc tatttggcat gttcaccggg ttgattgacg
     2221 acatcggcgt cgtcgagcgc gtggagcgga cggacgcggg gcgcgagctc cggatccgca
     2281 gccgctacac cgggctcgcc gacggagaga gcgtcgcggt gaacggcgtc tgtctcaccg
     2341 tgcgcgaatc gggcgccggg tggttcgacg tggccgccat cgtgacgaca ctcggccgca
     2401 cgacggtcgg cgactgggtc gtggggcagc gcgtgaacct cgagcgcgcg atgcgcctcg
     2461 gcgaccgtct cgggggacat ctcgtgcagg gccacgtcga cgacgtcggg atcgtggagg
     2521 tccagcgtcg cgagggggac gcgattctcg tggacgtgcg ccttccggcg gagctcgaac
     2581 cgctcatggt gccccatggc tcggtggcgg tggatggggt gagcctcacc gtgaacgcgc
     2641 tgcccgctcc gggcattctt caactgagcc tcatcgagtt cacggcacgg cacacgaccc
     2701 tcggcggact gcgcgcgggt gaccgcgtga acgtcgaggc cgacatgatg ggcaagtacg
     2761 ttcgccagct cgtcgccccg tacgccgccg cgcgatgaac cacctctcgc actcctgcgc
     2821 atgcctttga acaccgtgga acaggccgtc gccgacatcg cggcgggcaa gctgatcatc
     2881 gtggcggacg acgaggaccg cgagaacgag ggagacctca tctgcgcggc gcagctcgtg
     2941 acgccggagc tggtgaactt catgatcaag cgcgccgggg gactcatctg cgtcgcgctg
     3001 gccggcgagc gcgtggacca gctcgcgctg ccgccgatgg cggagagcaa cccggacgag
     3061 taccgcaccg cctacacggt gagcgtggat gccgcgccgc gcttcggcgt gacgaccggc
     3121 atcagcgcgc acgatcgcgc gacgacgatc cgcaccctcg tcgatccggc caccgtgccg
     3181 ggcgacctgc ggcacggcgg ccacgtgcat ccgctgcgcg cgcgcgacgg cggcgtgctg
     3241 cagcgggtgg ggcacacgga gacggcggtg gacctcgcgc gcctcgccgg cgtgtacccg
     3301 gcgggggtga tctgcgagat cctcaacgac gacggctcca ccgccaagcg tccgcagctc
     3361 gaggtgttcg cccgggagca tgggctcacc ttcatcaccg tggcgcagct cgtcgcgcac
     3421 cggctcaagc acgagcgcct ggtgcaccgc gtggccgagg cgcgccttcc caccgcgtac
     3481 ggcacgtgga cggtgttcgg gtatcgcaac gacgtcgacg acgcggagca cgtggccatc
     3541 gcctatggcg agatcggcga cggcgagaac gtgctggtgc ggatgcactc caagtgcctc
     3601 acgggcgacg tcttccattc gatgcgctgc gactgcggct ggcagctcga caccgcgatg
     3661 cggatgatcc agcaggaagg gcggggcgtg atcgtctatc tcgatcagga gggacgcggc
     3721 atcggcctgc tcaacaagct gaaggcgtac gagctgcagg atcagggcgc cgatacggtg
     3781 gaggcgaacg agcagctcgg cttcgcgccc gacctgcgca actacggcat cggtgcgcag
     3841 atcctgctcg atctcggcct gaagtccatc cgccccatca ccaacaaccc gcggaagatg
     3901 gtcggcctgg aagggtacgg cctccgcgtc gacgagcgcg tcccgatcgt ccagccggag
     3961 aacaccgaga acgccggcta tctcggaacg aagcgcgaca agctcggcca cctgctggca
     4021 tcctgacatc catggcggaa ttcaacggcg ttcccaacgg ggaggggcgg cgctatgccg
     4081 tgctcgcctc ccggttcaac aaccacgtca cgtccaagct cgccgacggc gcgatggacg
     4141 cgctcgtgcg tcatggggtg gcgtcggagg acgtggacct cgtgtgggtg ccgggggcgt
     4201 gggagcttcc cttcgccgcg cggcgcctgg ccgccaccaa ccgctacaac gcgctcgtgg
     4261 tgctcggcgc cgtgatccgc ggcgacacgc cgcacttcga cttcatctcg gcggaggcgt
     4321 cgcgcggcat catggacgcc agcacggagt acgacatccc gatcgggttc ggactgctca
     4381 cctgcgacac catggagcag gcggaggcgc gcgcgggtgg cgagcatggc aacaaggggt
     4441 gggacgcggc gatcgccgcg ctcgagatgt cggatctctt cgaaaggctc gatggcgcgg
     4501 acgagggttg agacgcgggc ccgggcgcgg gcgctccagg cgctctacgc gtgggacatg
     4561 cgggggaacg acagggggga gctcgagcgg gtcgcgacac aggtgtggga cgatctgtcg
     4621 atcacggccg acgagcgccg catcgccggg ccgatcgtgc gcgtcgtcgc cagcaagggc
     4681 tccgcgctgg acgaccagct cgccgacgtc acgaccaact ggcgcctcga gcgcatcggc
     4741 gcggtggagc ggtgcgtgct gcgcctggcg gccgcggagc tcacgatcgg cgacacgccg
     4801 ccgcgcgtgg tgatccagga ggccgtcacg ctcgccgagc gcttcggcag cgcggccagc
     4861 gcgcggttcg tgaacggcgt gctcgacgcc ctcgctcggc gcatggggcg catctagtgc
     4921 ggctgcttct cgtcaactgg cagtgccggg agaatccgct ggccggcggc gcggagatcc
     4981 atctccacga gatcttcggc cgcctcgcca cgcgcgggca ccaggtcacc ctgctgtgtg
     5041 gcgggtggga cggcgccgac ccgtccacta ccctggacgg gatcgacgtg atgcgcgtcg
     5101 gcacgcgcta cacctttccc ttcctcgcgc gcgcggccta tcgtcggcgg ctggcggatc
     5161 gtccgttcga cctgctcgtg gaggacgtca acaagatccc gctcgccacg ccgcgctggg
     5221 gcgggccgcc ggtcgtcgcg ctcgtgccgc atctcttcgg cggcacggcg ttccaggagc
     5281 tggccgcgcc cctcgc
//
LOCUS       DASSYW010001166         2010 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_775411, whole genome shotgun sequence.
ACCESSION   DASSYW010001166 DASSYW010000000
VERSION     DASSYW010001166.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2010)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2010)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2010
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_775411"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..653
                     /locus_tag="VFN38_18380"
     CDS             <1..653
                     /locus_tag="VFN38_18380"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HET9013801.1"
                     /translation="NQTGMVILPGAIASAVTMAFVGRNATRLDARVTVPIGAGLFFFS
                     MWKLSLLTYDAGAHDLFWPLIARGVGLGLIFVPLTGATMAELKPFELAQGTGMFNLTR
                     QLGGSLGIAISATLLGRFTAQSRALLSEHIVNGDPTTMARVEMITRGLVARGMNAVVA
                     KQQALAVLDRQMQGQASVLAFSKLYLFSGIALLVSMPLLFLFRSGKSRGLGPGAGH"
     gene            752..>2010
                     /locus_tag="VFN38_18385"
     CDS             752..>2010
                     /locus_tag="VFN38_18385"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HET9013802.1"
                     /translation="MAFPLKLTSLVESARVGADSLRSNPLRTVLATTGVIIGVASLVA
                     AFAITDGVEVWSRALIARESSVQDVAVTARTHERVRGRSIPVRGYPELTLEDAERAQA
                     EVPGVIRHALMLNGRAETEHLGARATVQLTLGTASLADFAGLRFAGGRFFTQGEETHG
                     SPVIVLGHRTATELAGAHDPLWLLGRTIRAGPERREVVGVLETPSSGDEPDLVAFAPL
                     RGGVELLEPTAAPRVPTLRLKARSIEAVDTLQGQVVNWLAERYGRGVEKLDVVVGTER
                     LHNTRQAMLLSKLLLGLLASLILAVGGIGIMNVLLAAVVERTREIGIRKAVGASRRDI
                     QAQFLVESVTVTTVGSAIGFVGGLVIAFVGTAVFRRITGAGIWPVVHGSTSLIAIGAA
                     VVVGVAFGTYPARRAASLSPIEAIARE"
BASE COUNT          276 a          632 c          776 g          326 t
ORIGIN      
        1 cgaaccagac cgggatggta atcctgcccg gtgcgatcgc gtcggcggtg acgatggcgt
       61 tcgtcgggcg gaacgcgacc cggctggatg cacgggtgac ggttccgatc ggggcgggcc
      121 tgttcttctt cagcatgtgg aagctctcac tgctcacgta cgacgcgggc gcgcacgatc
      181 tcttctggcc gctcatcgcg cgcggcgtcg ggctggggct catcttcgtg ccgctgaccg
      241 gcgcgacgat ggcggagctc aaaccgttcg agctcgcgca ggggacgggc atgttcaacc
      301 tgacgcgcca gctcggcggc tcgctcggca tcgcgatcag cgcgacgctg ctcgggcgat
      361 tcacggcgca gtcgcgggcg ctgctgtcgg agcacatcgt gaacggcgac ccgacgacga
      421 tggcgcgcgt cgagatgatc acgcggggac tggtggcgcg cggcatgaac gccgtcgtgg
      481 ccaagcagca ggcgctcgcg gtcctcgacc ggcagatgca gggacaggcg agcgtgctcg
      541 cgttctcgaa gctgtacctg ttcagcggca tcgcgctcct cgtgtcgatg ccgctgctgt
      601 tcctgttccg gtcgggaaag tcgcgcgggc tggggccggg ggcggggcac tgagggacgg
      661 tggtgggtgg ggggtgttgg gtggtgagtg acagcgttcg aagtcactca cgacgcaaaa
      721 ctcagaacgc accacttccg tagggcttgc catggccttc ccgctcaagc tcacctccct
      781 cgtcgagtcg gcgcgggtcg gtgcggattc gctgcggtcg aatccgttgc ggacggtgct
      841 cgcgacgacg ggagtgatca tcggggtcgc ctcgctcgtg gcggcgttcg cgatcacgga
      901 cggggtcgag gtgtggtccc gcgcgctgat cgcccgcgag agcagcgtgc aggacgtcgc
      961 cgtcacggcg cgcacgcacg agcgggttcg cggcagatcg ataccggtcc gcggctatcc
     1021 cgagctcacg ctggaggacg ccgagcgggc ccaggccgag gtgccggggg tgatccgaca
     1081 tgcgctgatg ctcaacggcc gagccgaaac ggagcatctc ggcgcgcgtg ccaccgtgca
     1141 gctgacgctc ggcaccgcga gcctcgcgga cttcgccggc ctgcgcttcg ccggcgggcg
     1201 attcttcacg cagggggagg agacgcacgg gtcgccggtc atcgtgctcg gtcatcgcac
     1261 ggcgacggag ctcgccggcg cgcacgatcc gctctggctc ctcgggcgga cgatccgcgc
     1321 cgggcccgag cgacgcgagg tggtcggcgt gctggagaca ccgtccagcg gcgatgaacc
     1381 cgacctcgtc gcgttcgcgc cgctgcgcgg cggcgtcgag ctcctcgagc ccaccgccgc
     1441 gccgcgcgtg ccgacgctgc ggctcaaggc gcgcagcatc gaagcggtgg acacgctcca
     1501 ggggcaggtc gtgaactggc tggccgagcg ctacgggcgt ggagtcgaga agctcgacgt
     1561 ggtggtcggt accgagcggc tccacaacac gcgtcaggcg atgctgctgt cgaagctgct
     1621 gctcggactg ctggcgtcgt tgatcctcgc agtcggaggg atcgggatca tgaacgtgct
     1681 gctcgccgcg gtggtggagc gcacgcgcga gatcggcatc cgaaaggcgg tgggtgcgag
     1741 ccgccgggac atccaggcgc agttcctcgt cgagtcggtg acggtgacga cggtggggag
     1801 cgcgatcggc ttcgtcggcg ggctcgtgat cgcgttcgtt ggcacggcgg tgttccgacg
     1861 aatcactggg gcagggatct ggccggtcgt ccacgggtcg acgtcgctga tcgcgatcgg
     1921 tgccgcggtc gtcgtcggcg tggcgttcgg gacgtatccg gcgcgtaggg cggcgagtct
     1981 gtcgccgatc gaggcgatcg cgagggagtg
//
LOCUS       DASSYW010001167         2640 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1221495, whole genome shotgun sequence.
ACCESSION   DASSYW010001167 DASSYW010000000
VERSION     DASSYW010001167.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2640)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2640)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2640
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1221495"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            142..1356
                     /locus_tag="VFN38_18390"
     CDS             142..1356
                     /locus_tag="VFN38_18390"
                     /inference="COORDINATES: protein motif:HMM:NF024491.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D-like domain-containing protein"
                     /protein_id="HET9013803.1"
                     /translation="MSQPLKPASLDVQPPAPVPAPASLVERRREPAGGPAFARGLWRI
                     AAADVSSGNDVELLQDGPATFDAMCDAIGGARHTIVLEAYIFRSDDVGHRIGAALIAA
                     AERGVKIRLLTDWIGMRGIRSSFLAMLRKAGVEHRVFSRPGFRAWLGLIPRDHRKLLV
                     IDSTLGITGGVGIGNEWIGKTKRHKGHWRDTAVRIEGPAAMDMQQAFDTMWDRARERE
                     RRGSHRLTRRAARGAHLDPATAEPALVGIIEGEPLRLRVARALQMQAISAERSIWIAT
                     AYFAPSWSEVEALTGAARDGVDVRVLVPSRNDHPWVTLLTRRYYRRLLTNGVRIWEWK
                     GTMMHAKTSVVDGRWVRVGSTDFNPLGVAINFELDAVIEDAALGAKAEAMFLDDLEHS
                     REITMRSRKVQR"
     gene            1443..2189
                     /locus_tag="VFN38_18395"
     CDS             1443..2189
                     /locus_tag="VFN38_18395"
                     /inference="COORDINATES: protein motif:HMM:NF013718.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HET9013804.1"
                     /translation="MGPLFTYRDAFLAGGFALGARLVHPLDDHFAEVLQDSGAQSNRK
                     LQELAAFVRTTATPGSYLIGGSMYLVGRVAGNHKLASLGLHGTEALVIGEATAWVLKG
                     LVGRQRPFVEPRNPDSYQLFRGLKKGNPYRSFPSGHSVSAFAAAAAVTAETSRNAPNS
                     TWFVAPIMYGGAALVGISRMYNNQHWASDVLVGAGIGTFAGLKVVRFHDSRPDNRLDR
                     LFLTGSLVPDGAGGHALRWSVLPGALLGQR"
     gene            2383..>2640
                     /locus_tag="VFN38_18400"
     CDS             2383..>2640
                     /locus_tag="VFN38_18400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013805.1"
                     /translation="MAQRVSIAQAQLQAARQFLSERARRQPPEEESLQLADVLEEEYA
                     YLDGAPALPVPQRNWSVQPQHIIDLADFARKLHAATCSTESP"
BASE COUNT          351 a          999 c          933 g          357 t
ORIGIN      
        1 aggctggagg ccaacggagg aacggtcacc gttcaccgtt caccgctcgc cattcgccgt
       61 tcaccgccgt tcgcgtcctc gccggccgtc gcgcccgggc cccgagtacc cgtcgtgccc
      121 gagcaccatt atcgtgtacc catgtcgcag cccctgaagc ccgcctccct cgacgtccag
      181 cccccagcgc ccgtccccgc ccccgcctcg ctcgtcgagc ggcggcgcga gcctgccggg
      241 gggccggcgt tcgcgcgcgg gctctggcgc atcgccgccg ccgacgtctc cagcgggaac
      301 gacgtcgagc tgctccagga cgggccggcc accttcgacg cgatgtgcga cgccatcggc
      361 ggcgcgcgcc acacgatcgt cctcgaggcg tacatcttcc gctccgacga cgtggggcac
      421 cgcatcggcg ccgccctcat cgccgcggcg gagcgcgggg tgaagatccg gctcctcacc
      481 gactggatcg gcatgcgcgg catcaggtcg agcttcctcg ccatgctgcg gaaggcgggg
      541 gtggagcacc gcgtgttcag ccggcccggc ttccgcgcct ggctcgggct catcccgcgc
      601 gaccaccgca agctcctcgt catcgactcc accctcggca tcaccggcgg ggtggggatc
      661 ggcaacgagt ggatcggcaa gacgaagcgg cacaagggac actggcgcga caccgccgtg
      721 cgcatcgagg ggccggcggc gatggacatg cagcaggcgt tcgacacgat gtgggaccgg
      781 gcgcgcgagc gggagcggcg cggctcgcac cggctcaccc gccgcgcggc gcgcggggcg
      841 cacctcgacc cggccaccgc cgagccggcg ctcgtcggga tcatcgaggg ggagccgctg
      901 cggctgcgcg tcgcccgcgc cctccagatg caggccatct cggccgagcg gtccatctgg
      961 atcgcgacgg cgtacttcgc gccgagctgg tcggaggtgg aggcgctcac cggcgcggcg
     1021 cgcgacgggg tggacgtccg cgtcctggtg ccgagccgca acgaccaccc ctgggtcacc
     1081 ctcctcaccc ggcgctacta ccgccgcctg ctcacgaacg gggtgcggat ctgggagtgg
     1141 aaggggacga tgatgcacgc caagacgagc gtcgtggacg gccgctgggt gcgcgtcggc
     1201 tccaccgact tcaacccgct gggggtggcg atcaacttcg agctcgacgc cgtgatcgag
     1261 gacgccgcgc tgggcgcgaa ggcggaggcg atgttcctcg acgacctgga gcactccagg
     1321 gagatcacga tgcgctcgcg caaggtgcag cgctgagccc cgtccgccgc gcgctcgcgg
     1381 gcgcgctcgt cgtcctcgcg ctggccgcgc gcggcgcgct ggcccagggc gacaccaccg
     1441 ccgtgggccc gctcttcacc taccgggacg ccttcctcgc cggcgggttc gccctcggcg
     1501 cgcgcctcgt gcacccgctc gacgaccact tcgccgaggt gctccaggat tccggcgccc
     1561 agtcgaaccg gaagctccag gagctcgcgg ccttcgtgcg caccacggcg acgccggggt
     1621 cgtacctcat cggcggctcg atgtacctgg tgggccgggt ggcggggaac cacaagctcg
     1681 cgtcgctggg gctgcacggc accgaggccc tcgtcatcgg cgaggcgacg gcgtgggtgc
     1741 tcaaggggct cgtgggccgg cagcgcccct tcgtggagcc ccgcaacccc gacagctacc
     1801 agctcttccg cgggctgaag aagggcaatc cgtaccggtc gttcccgtcg gggcactccg
     1861 tctcggcgtt cgccgcggcg gcggcggtga cggcggagac ctcgcgcaac gcgcccaact
     1921 ccacctggtt cgtcgcgccc atcatgtacg ggggcgcggc gctcgtcggc atctcgcgga
     1981 tgtacaacaa ccagcactgg gccagcgacg tcctcgtcgg cgcggggatc ggcaccttcg
     2041 ccggcctcaa ggtcgtgcgc ttccacgact cgcggccgga caaccggctc gaccgcctct
     2101 tcctcaccgg ctccctcgtg cccgacgggg cgggcgggca cgcgctccgc tggtcggtgc
     2161 tgccgggcgc gctgctgggc cagcgttgac ggcgacgcgg cgaacgggga gtccgacgac
     2221 gtagccttca cgggcgatgt ctcgccacgt cgggaggccg gcgacagggg cgggacagcg
     2281 gcggcgatac ggatcgcgtc agggcgtccc gattcgcgtc accctcctgt tccgccccgc
     2341 ccgcctctgc cacgattagc ggcatccgtt ccggagtccg ccatggccca gcgagtctcg
     2401 atcgcgcagg cgcagcttca ggccgcgagg cagttcctca gcgagcgggc gcgccgccag
     2461 ccgcccgagg aggaatcgct ccagctcgcg gacgtgctcg aggaggagta cgcctacctc
     2521 gacggcgctc cggcgctccc ggtgccgcag cgcaactggt cggtgcagcc gcagcacatc
     2581 atcgacctcg ccgacttcgc gcggaagctg cacgccgcca cctgcagcac ggaatcgccc
//
LOCUS       DASSYW010001168         2948 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1336012, whole genome shotgun sequence.
ACCESSION   DASSYW010001168 DASSYW010000000
VERSION     DASSYW010001168.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2948)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2948)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2948
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1336012"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1025
                     /locus_tag="VFN38_18405"
     CDS             <1..1025
                     /locus_tag="VFN38_18405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="NADH:flavin oxidoreductase/NADH oxidase"
                     /protein_id="HET9013806.1"
                     /translation="RNRIGVSPMCEYSSDDGFANDWHLVHLGSRAVGGAGLVLTEATA
                     VTADGRISPFDLGIYRDEHVEMLARIARFVTAQGAVPGMQLSHAGRKASSDAPWRGGR
                     PLSPAEGGWRPTWAPSALPFGERSPTPEALDRAGIGRVVAAFRDAARRALDAGFQVLE
                     LHGAHGYLLHEFLSPLSNRRTDDYGGSFDNRVRLFVEVTRAVRSVWPESLPLLARLSG
                     TDWVEGGWDIEQSIALARILAPLGVDLIDCSSGGIVPGVKIPVGPGYQVEIARRIRRD
                     AGIATAAVGLITDAAQADAIVRDGHADMVFLARQLLRDPYWPLHAARSLGASVVWPVQ
                     YQRAVE"
     gene            1171..1608
                     /locus_tag="VFN38_18410"
     CDS             1171..1608
                     /locus_tag="VFN38_18410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013807.1"
                     /translation="MISHVRYAVAAVALSIFAASTAGAQAQEEHKPGGLNKVAHAVSK
                     TVKKAGRDTKAEVKRGSSKAHNALTDAGNDTKAQLKRTTGIKAPQKHQPGGLNKVARD
                     ISKTSKKAASDTKAEKNRVKSEVHGDLTEAGKSVKDTTLKGKP"
     gene            complement(1711..>2948)
                     /locus_tag="VFN38_18415"
     CDS             complement(1711..>2948)
                     /locus_tag="VFN38_18415"
                     /inference="COORDINATES: protein motif:HMM:NF016260.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="translocation/assembly module TamB
                     domain-containing protein"
                     /protein_id="HET9013808.1"
                     /translation="AGGTLRASGIVDLTDRKRPFVRMVAEGRNLRVFDATRGLVDADG
                     EVEAVGPLEAIRVTGRAEMLHGFLALKQFRKDLLRVKAPGELTFFAVYDTTRPAADSA
                     RRAVALAKPKRVGVIADLSLVVDRGNYYRNRPDANTEFYTGDGEEVRAHIDTRSGDQW
                     AVGFVRIGEGVAIFRANRFEPARGTLTFSAYTNGPGFVEQVGERPVWEPGRGFFPVQL
                     LTGGTSKAPAVGLESGALFPMRGRELNAYLTIGRSPTSLLQQSGSSLSGSEAWSGQLS
                     GETGALARRQQAATALGVVLHDIGTGATKEFGLDAFSVSPADVPTELVFGKTGGVRGA
                     MIEGGRYLTVDRYVAGQMRLTTGIPGARLSQRFGTVYRLDVGVEPRFLFRNPEDLGIT
                     HPTVRTGAFAAFLTRMWDW"
BASE COUNT          456 a         1055 c         1048 g          389 t
ORIGIN      
        1 tgcgcaaccg catcggcgtc agcccgatgt gcgagtactc cagcgacgac gggttcgcga
       61 acgactggca cctggtgcac ctcggcagtc gagcggtcgg cggggcgggg ctcgtcctca
      121 ccgaagccac cgccgtcacc gccgacggcc gcatctctcc cttcgacctc ggcatctatc
      181 gcgacgagca cgtcgagatg ctcgcgcgca tcgcccgctt cgtcaccgca cagggcgcgg
      241 tgccggggat gcagctctcg cacgcgggtc ggaaggcgag cagcgacgcg ccgtggcgcg
      301 gcggccggcc gctctccccg gccgaagggg gttggcgtcc gacatgggca cccagcgcgc
      361 tcccgttcgg ggagcgctcc ccgacgccgg aggcgctcga ccgcgcgggg atcgggcgcg
      421 tggtcgccgc ctttcgcgat gccgcgcgcc gcgcgctgga cgccggattc caggtgctcg
      481 agctgcacgg cgcacacggc tacctgctgc acgagttcct ctccccgctc agcaaccggc
      541 gcaccgacga ctacggaggc agcttcgaca accgcgtgcg gctgttcgtc gaggtcacgc
      601 gggcggtgcg atcagtgtgg ccggaatcgc tcccgctgct ggcgcgcctc tcgggcaccg
      661 actgggtgga gggcggttgg gacatcgagc agtccatcgc gctggcgcgc atcctcgccc
      721 cgctcggcgt cgatctcatc gactgctcgt cgggagggat cgtgcccggg gtgaagattc
      781 ccgtgggacc tgggtaccag gtggagatcg cgcggcgcat ccggcgcgac gccgggatcg
      841 cgaccgccgc ggtggggctc atcaccgacg ccgcgcaggc cgacgcgatc gtgcgcgacg
      901 gccacgccga catggtcttc ctcgcccgcc agctcctgcg cgatccctac tggccgctgc
      961 acgcggccag gagcctcggc gcgagcgtcg tctggccggt gcagtaccag cgggcggtgg
     1021 agtagcggtc gtcgccggag acgtcgtgcc gggcgagcgg atccgcgctc tgcccgggtc
     1081 gtcgaagcgg gcacgtcgtt gcccagcgcg acgtccggtg agtccgtctc ttgcattcac
     1141 cgggggtatt caccttcgga ggaatcccgg atgatcagtc atgttcgcta tgcggtggcc
     1201 gcggtcgccc tttcgatctt cgcggcgtcg acggccggcg cgcaggccca ggaagagcac
     1261 aagcccggcg ggctgaacaa ggtggcacac gccgtcagca agacggtgaa gaaggccggc
     1321 cgcgacacca aggcggaggt caagcgcggc tcgagcaagg cgcacaatgc gctgaccgac
     1381 gccggcaacg acaccaaggc gcagctcaag cggacgaccg gcatcaaggc gccgcagaag
     1441 caccagccgg gcgggttgaa caaggtcgcg cgcgacatca gcaagacgtc caagaaggcg
     1501 gcgagcgaca cgaaggccga gaagaaccgg gtgaagagcg aggtgcacgg cgacctcacc
     1561 gaggcgggca agagcgtgaa ggacacgacg ctcaagggaa agccgtaagc cagagcgggt
     1621 cgcaacccga catgagtcgc gggggtggcg tgtcgagtgc gacacgcgac ccccgcgctg
     1681 catttcatgt cggcccgacg cgcgccaccc ctaccagtcc cacatcctcg tcaggaacgc
     1741 cgcgaaggcg ccggtgcgca cggtggggtg cgtgatgccg aggtcttccg ggttgcggaa
     1801 caggaagcgc ggctcgacgc cgacgtccag gcgatacacg gtcccgaagc gctgcgacag
     1861 ccgcgcaccg ggaatgccgg tggtcagccg catctggccg gcgacgtagc gatccaccgt
     1921 caggtagcgt cccccttcga tcatcgcgcc gcgcacgccg cctgtcttgc cgaacacgag
     1981 ctccgtcggc acgtcggccg gcgagacgct gaacgcgtcg aggccgaact ccttcgtcgc
     2041 gccggtgccg atgtcgtgca ggacgacgcc cagcgccgtg gcggcctgct ggcgccgggc
     2101 aagcgcaccg gtctccccgg agagctggcc gctccacgcc tcgctgcccg agagcgacga
     2161 ccccgactgc tggagcagcg acgtgggaga gcgtccgatg gtgagatagg cgttcagctc
     2221 gcggccgcgc atgggaaaga gcgcgccgct ctccagcccc accgccggcg ccttggacgt
     2281 gcctcccgtc agcagctgca ccgggaagaa tccgcggccc ggctcccaca cgggacgctc
     2341 ccccacctgc tccacgaagc cgggcccgtt ggtgtaggcc gagaaggtga gcgtaccgcg
     2401 cgccggctcg aaccggttgg cgcggaagat cgccaccccc tcgccgatgc gcacgaaccc
     2461 caccgcccac tggtcgccgc tgcgcgtgtc gatgtgcgcg cgcacctcct cgccgtcgcc
     2521 cgtgtagaac tcggtgttcg cgtcgggccg gttgcgatag tagttgccgc ggtccaccac
     2581 gagcgacagg tcggcgatca cgccgacgcg cttcggcttc gcgagcgcca cggcgcggcg
     2641 cgcgctgtcg gcggcggggc gcgtcgtgtc gtacacggcg aagaaggtga gctcgcccgg
     2701 cgccttcacg cgcagcagat ccttccggaa ctgcttgagc gcgaggaagc cgtggagcat
     2761 ctcggcccgg ccggtcacgc ggatcgcctc gaggggaccc accgcctcga cctcgccgtc
     2821 ggcgtccacc agcccacgcg tagcgtcgaa cacgcggagg ttgcgcccct ccgccaccat
     2881 gcgcacgaag gggcgcttgc ggtcagtgag atccacgatg cccgaggcgc gcagcgtgcc
     2941 gcccgccc
//
LOCUS       DASSYW010001169         2139 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_658254, whole genome shotgun sequence.
ACCESSION   DASSYW010001169 DASSYW010000000
VERSION     DASSYW010001169.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2139)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2139)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2139
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_658254"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..232
                     /locus_tag="VFN38_18420"
     CDS             <1..232
                     /locus_tag="VFN38_18420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013809.1"
                     /translation="LGYRFYRDGEYQKAHVALVLYSYTGLVSLGHFLYGGPDELTTRA
                     LVSVAIDAMAGTAVLAVAVRSILARRRTASAA"
     gene            280..>2139
                     /locus_tag="VFN38_18425"
     CDS             280..>2139
                     /locus_tag="VFN38_18425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013810.1"
                     /translation="MSGRGITKAATWRCALAALIALLFALLVLAAAAGMQRSSTAAAA
                     GASDARYALANGCYALRSRQNGKLVAKDAEGRYAASAGSTGEAEAFRMKATALGSYLF
                     YGRAGDFLAAGSPEITDLLPVGSKNRAASQATPNEAADWTVDTAAGAFQISLPYAGGK
                     LLATSGDGQIVIADPSTAGDAALFAFEPSQGCATFPEVEVNATGTPSRGATPFGEVRG
                     LIDAHIHGMAFEFLGGRAHCGRPWSPYGVTVALVDCPDHVTGAAPLETGVSGTARHDP
                     AGWPTFKGWPTYNQLTHEQTYYKWLERSWRGGLRVWVNLLVDNHALCELYPLKKNSCN
                     EMDSVRLQAKDLRALENYIDAQEGGPGKGWFRIVESPYEARRVINEGKLAVVMGIENS
                     KLFDCGVYNGAATCDRATIDREMDEVYKLGVRDMELINKFDNGFGGVAGDSGNTGIVV
                     NTGNFYETGKFWDMQTCQGPNEESDHEQMTLPGAARDVLVGDLLGKLLPGGTLPAYPA
                     PPHCNTRGLSALGDHLVRDMIAKRMIVDPDHLDVISRKELLSIAEAARYSGAVSSHSW
                     STADAYPRIYKLGGFITPYAGSSVSFANQWKALMAVRDKHFLRAIGWGADMNGF"
BASE COUNT          333 a          767 c          756 g          283 t
ORIGIN      
        1 gctcggctac cgcttctaca gggacggcga gtaccagaag gcgcacgtcg cgctggtgct
       61 ctactcgtac accggcctcg tgagcctcgg ccacttcctc tacggaggcc cggacgagct
      121 caccacccgc gcgctggtgt cggtggcgat cgacgcaatg gcgggcacgg cggtgctggc
      181 cgtggccgtg cgctcgatcc tcgcccgcag gcgcaccgcg tcagccgcct gagcgagcgc
      241 ctggcgcgcc gccccgcgca tcctggttga atcgcgggcg tgtcagggag ggggatcacg
      301 aaggccgcca cctggcgctg tgccctggcg gccctgatcg cgctcctgtt cgcgctgctc
      361 gtgctcgcgg ccgccgccgg catgcagcgg tccagcaccg ccgccgcggc cggcgcgagc
      421 gacgcgcgct acgcgctcgc gaacggctgc tacgcgctcc gctcgcggca gaacgggaag
      481 ctcgtggcca aggacgcgga aggccgctac gccgccagcg ccggcagcac cggcgaggcc
      541 gaggcgttcc ggatgaaggc cacagcgctc ggctcgtacc tcttctatgg gcgcgcgggc
      601 gacttcctcg ccgcggggtc gcccgagatc accgacctgc tgccggtggg ctcgaagaac
      661 cgcgccgcgt cccaggcgac gccgaacgag gccgccgact ggaccgtgga cacggccgcg
      721 ggcgcgttcc agatcagcct gccgtacgcg ggcgggaagc tgctcgccac ctcgggcgac
      781 ggccagatcg tgatcgccga cccgtccacg gccggcgacg ccgcgctgtt cgccttcgag
      841 ccctcgcagg gctgcgccac gttccccgag gtcgaggtga acgccaccgg cacgccctcc
      901 aggggcgcca cgccgttcgg cgaggtgcgc ggcctgatcg acgcccacat ccacggcatg
      961 gcattcgagt tcctcggcgg ccgggcgcac tgcggccgcc cctggagccc gtacggcgtg
     1021 acggtggcgc tcgtggactg ccccgaccac gtcaccggcg cggcgccgct cgagaccgga
     1081 gtgtccggca cggcgcggca cgaccccgcc ggctggccga cgttcaaggg ctggcccacc
     1141 tacaaccagc tcacgcacga gcagacctac tacaagtggc tcgagcgctc ctggcgcggc
     1201 ggcctgcggg tgtgggtgaa cctgctcgtg gacaaccacg cgctctgcga gctctacccg
     1261 ctgaagaaga acagctgcaa cgagatggac agcgtgcggc tccaggcgaa ggacctgcgg
     1321 gcgctcgaga actacatcga cgcgcaggag ggcggccccg gcaagggctg gttcaggatc
     1381 gtcgagagcc cgtacgaggc gcgccgcgtg atcaacgagg gcaagctcgc cgtggtgatg
     1441 gggatcgaga actcgaagct gttcgactgc ggcgtctaca acggggccgc gacgtgcgac
     1501 cgcgcgacga tcgaccgcga gatggacgag gtctacaagc tcggcgtgcg cgacatggag
     1561 ctgatcaaca agttcgacaa cggcttcggc ggcgtcgcgg gcgactccgg caacaccggg
     1621 atcgtcgtca acaccggcaa cttctacgag accggcaagt tctgggacat gcagacgtgc
     1681 cagggcccca acgaggagtc cgaccacgag cagatgacgc tgccgggcgc ggcgcgcgac
     1741 gtgctggtgg gcgacctgct cggcaagctg ctgcccggcg gcacgctccc ggcctatccg
     1801 gcgccgccgc actgcaacac gcgcgggctc agcgcgctgg gcgatcacct ggtgcgcgac
     1861 atgatcgcca agcggatgat cgtcgacccc gaccacctcg acgtgatctc gcgcaaggag
     1921 ctgctgtcga tcgcggaggc ggcgcgctac tcgggcgccg tgtcgtcgca cagctggagc
     1981 acagccgacg cctacccgcg gatctacaag ctcggcgggt tcatcacgcc ctacgccggc
     2041 tcgtcagtga gcttcgccaa ccagtggaag gcgctcatgg cggtgcgcga caagcacttc
     2101 ctgcgcgcga tcggctgggg cgcggacatg aacggcttc
//
LOCUS       DASSYW010001170         2242 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_167533, whole genome shotgun sequence.
ACCESSION   DASSYW010001170 DASSYW010000000
VERSION     DASSYW010001170.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2242)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2242)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2242
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_167533"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..919)
                     /locus_tag="VFN38_18430"
     CDS             complement(<1..919)
                     /locus_tag="VFN38_18430"
                     /inference="COORDINATES: protein motif:HMM:NF013215.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013811.1"
                     /translation="MTDARTLDRIRGLVIPPAWTDVHIAASGRAEIQAWGLDAKQRKQ
                     YRYHLRAVERGQLRKYYRVRELARELPALRARMRTHAAARAPSRRAVAAAVVRLISES
                     FFRVGGEKYAEENGTFGITTLRKRHVELVKGQAVFTYVGKKSIRQRQVVTNRELARLV
                     KRHLASPGARLFRYRDGSRWRDLTARDVNEYLHETLGYSYSAKDFRTWGGTLRAATVL
                     AELGPARTPTEARRNVATTMRLVASELGNTPTICRTSYVHPIVVARYLDEGETIQLSA
                     RYRQATDEYAHSAEERALIRFLDRHFPERR"
     gene            1074..1853
                     /locus_tag="VFN38_18435"
     CDS             1074..1853
                     /locus_tag="VFN38_18435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HET9013812.1"
                     /translation="MAYELLTFDVTDRIATITVNRPDKLNALNDAVMDELRTAIAEAR
                     RRSDVGAVLLTGAGRAFVAGADIGELADQTAMEGKARAERGQRVFRRFETSPKPTLAA
                     VNGFALGGGCELAMSCHMRIASDTAKFGQPEVKLGIVPGFGGSQRLPRLVGKGRALQL
                     LLTGEVIDAAEAYRIGLVNRVVPAGELLAAARAMLTTILAQGPLAVAHCIEAVERGLD
                     MGLDDAIALEASYFGMLSATQDKAEGMRAFLEKRPAKFIGK"
     gene            1850..>2242
                     /locus_tag="VFN38_18440"
     CDS             1850..>2242
                     /locus_tag="VFN38_18440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2813 domain-containing protein"
                     /protein_id="HET9013813.1"
                     /translation="MTAADAHVVLRSLALRDFRNLARLDLTFPTAGVAIVGENGQGKS
                     NLLEAIYYLHLLRSVRGARDVDVVRFGAAGFHIAARTEGGANHELSAGFERAGRRKRV
                     KLDGAEPPRLSDALGALPCVLFSPADVEL"
BASE COUNT          296 a          796 c          813 g          337 t
ORIGIN      
        1 cccgccgctc cgggaagtgc cggtcgagaa agcggatgag cgcgcgctcc tcggccgagt
       61 gcgcgtactc gtcggtcgcc tggcggtatc gcgccgacag ctggatcgtt tcgccctcgt
      121 ccagataccg ggcgacgacg atcgggtgca cgtacgacgt ccggcagatg gtcggcgtgt
      181 tgccgagctc cgaggccacc aggcgcatcg tcgtcgcgac gttgcgccgt gcctccgtcg
      241 gcgtgcgggc cggccccagc tccgccagca ccgtcgcggc gcgcagcgtc cccccccagg
      301 tgcggaagtc cttcgcgctg tatgaatagc cgagcgtctc gtggaggtac tcgttcacgt
      361 cgcgcgccgt gaggtcgcgc cagcgcgagc cgtcgcgata ccggaagagc cgcgcccccg
      421 ggctcgcgag gtggcgcttc acgagccggg caagctcgcg gttggtgacc acctgccgct
      481 gccggatcga cttcttgccg acgtaggtga acaccgcctg tcccttcacc agctccacgt
      541 gccgcttccg gagcgtcgtg atgccgaagg tgccgttctc ctcggcgtac ttctcgccgc
      601 cgacgcggaa gaagctctcg ctgatgaggc gcaccaccgc ggccgccacg gcgcgccgcg
      661 agggcgcgcg cgccgccgca tgggtgcgca tgcgcgcccg tagcgcgggc agctccctgg
      721 ccagctcgcg tacccgatag tacttgcgga gctgcccgcg ctccacggcg cgcaggtggt
      781 agcgatactg cttccgctgc ttcgcgtcga gcccccatgc ctggatctcg gcgcggccgc
      841 tcgccgcgat gtggacgtcg gtccaggcgg gtgggatgac gagcccccgg atgcggtcga
      901 gcgtccgggc gtccgtcacc agccggccgt cggcgtgccg gtagcggaac ctcgatcggg
      961 agccttcgcg ggtgatccat tgggccatgg tcgaacgggc tcggggcaaa ttgtggtccg
     1021 tccatgtaga ttccggcatc gcgcgcttcg accttcggcc cgacgccccg cccatggcct
     1081 acgagctcct caccttcgac gtcaccgacc ggatcgccac gatcacggtg aaccgccccg
     1141 acaagctgaa cgccctcaac gacgccgtca tggacgagct gcggacggcg atcgccgagg
     1201 cgcggcgccg ctccgacgtc ggtgcggtgc tgctcacggg ggcgggacgc gccttcgtcg
     1261 ccggcgccga catcggggag ctcgcggacc agacggcgat ggaaggaaag gcgagggccg
     1321 agcgcgggca acgcgtcttc cggcggttcg agacgtcgcc caagccgacg ctggccgcgg
     1381 tgaacggctt cgcgctcggc ggcggctgcg agctggcgat gtcctgtcac atgcgcatcg
     1441 cgtcggacac ggcgaagttc gggcagcccg aggtgaagct cggcatcgtc cccgggttcg
     1501 gcggctcgca gcggcttccc cggctggtgg gcaagggccg cgcgctgcag ctgctgctca
     1561 cgggcgaggt catcgacgcg gcggaagcgt accgcatcgg gctcgtgaac cgggtcgtgc
     1621 cggccggcga gctgctcgct gcggcgcggg cgatgctcac gacgatcctc gcgcagggcc
     1681 cgctcgcggt ggcacactgc atcgaggccg tggagcgcgg cctcgacatg gggctcgacg
     1741 acgcgatcgc gctggaggcg tcgtacttcg gcatgctgtc cgccacgcag gacaaggcgg
     1801 aggggatgcg cgccttcctc gagaagcggc cggcgaagtt catcggcaag tgacggccgc
     1861 cgacgcgcac gtcgtgctgc gctcgctcgc gctgcgcgac ttccgcaacc tcgcgcggct
     1921 cgatctcacc tttcccaccg cgggcgtcgc gatcgtcggc gagaacggcc agggcaagtc
     1981 gaacctgctc gaggccatct actacctgca tctcctgcgc tcggtgcgcg gcgcccgcga
     2041 cgtggacgtc gtgcggttcg gcgcggccgg cttccacatc gccgcgcgca ccgagggagg
     2101 cgccaaccac gagctgtcgg ccgggttcga gcgggcggga cgccggaagc gggtgaagct
     2161 ggacggcgcc gaaccgccgc ggctgagcga cgcgcttggc gcgctgccgt gtgtgttgtt
     2221 ctcccctgcc gacgtggagc tc
//
LOCUS       DASSYW010001171         2588 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_17927, whole genome shotgun sequence.
ACCESSION   DASSYW010001171 DASSYW010000000
VERSION     DASSYW010001171.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2588)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2588)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2588
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_17927"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..753
                     /locus_tag="VFN38_18445"
     CDS             <1..753
                     /locus_tag="VFN38_18445"
                     /inference="COORDINATES: protein motif:HMM:NF017280.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylxylan esterase"
                     /protein_id="HET9013814.1"
                     /translation="GSKAHGYVARPAREGRFPALVQLQYAGVYALNAAAVARRASEGW
                     LILNVDSHDKLPSDPAGNVPRNYREIGNTSRETSYFLHMYLRDSRVLDYLLTRPDWDG
                     KTIVLTGGSMGGQQSLVLAGLRPEKISAVLVCVPAGADSNGNLHGRKAGYPDWESGNA
                     DVMRTALYFDTVNFAPRIKAPVMAGIGFIDTISPPAGIWTMLNQVAAPVEPLPMIESE
                     HDNLTPDKSRACFARVDEILEHVVHGGVFTPR"
     gene            complement(771..2093)
                     /locus_tag="VFN38_18450"
     CDS             complement(771..2093)
                     /locus_tag="VFN38_18450"
                     /inference="COORDINATES: protein motif:HMM:NF019222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1552 domain-containing protein"
                     /protein_id="HET9013815.1"
                     /translation="MNRHHTRAKGISRRTVLRGAGVTIALPWLESMNVWAAPGDLFPK
                     RFAVLFMGNGVNEDHWDSQGSGAGMTLSATLSPLEPLKHKINVVHGLFHKRATGNGIH
                     PAQTGGLLSGSVIQKGAIVRAGITIDQLLANRIGQETALPSLVLACEEPMTGFHETNY
                     SLAYSSHLSWQSADSPVPNELYPSLAWDSLFENRGSLRHLSILDRAKGEAAALGRSIS
                     SSDRAKLDEYLTSLREVEKRVEAMRKAKDTADDRAKGQNRPALTMPRPANGLPEDLRE
                     HTRLMCDLIAIAFQTDKTRIATLLLARDLGALYYPFLNVADGHHAASHENNSAGYARI
                     ATFHLSQLAYLASRLDAMPEGDGTVLDHSCLMWLSNMWIGRKHDNTRLPLVLAGGLGG
                     TLKTGRTLNYVDAGDENRKMSSLFLSLMDRMGVTLDQFGDAATRLDAL"
     gene            complement(2099..>2588)
                     /locus_tag="VFN38_18455"
     CDS             complement(2099..>2588)
                     /locus_tag="VFN38_18455"
                     /inference="COORDINATES: protein motif:HMM:NF019253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF1588 domain-containing protein"
                     /protein_id="HET9013816.1"
                     /translation="EQVLCASVPPPPANFQFEDPKITPDMTNRERMAVHTTNPACAAC
                     HARFDAFGLAFENFGPVGERREHDLAGRRTEVAAVLPGGVHASGAAGVREYVRQHRQD
                     DYLNTVSRKLWAYALNRSPILPDDVLLREMRAKLPANGYRFSSLVEAIVTSSPFLNRR
                     ME"
BASE COUNT          408 a          854 c          900 g          426 t
ORIGIN      
        1 ggttcgaagg cgcacggcta cgtggcgagg ccggcacggg agggcaggtt tcccgcgctc
       61 gttcagctgc agtacgcggg cgtctacgcc ttgaacgcgg ctgccgttgc gcggcgcgcc
      121 agcgaagggt ggctgatcct caacgtcgac tcacacgaca agctgccgtc ggacccggcc
      181 ggcaacgtgc cgcgcaacta ccgggagatc ggcaacacca gccgcgagac ctcgtacttc
      241 ctgcacatgt atctgcgcga ctcgcgcgtg ctggactacc tgctgacgcg gcccgattgg
      301 gacggcaaga cgatcgtgct gaccggcggc agcatgggcg gccagcagag tctcgtcctg
      361 gccggcctcc ggccggagaa gatcagcgcc gtgctggtgt gcgtgccggc tggcgccgac
      421 agcaacggga acctccacgg ccgcaaggcg ggctacccgg actgggagtc cggcaacgcc
      481 gacgtgatgc ggacggcgtt gtacttcgac acggtgaact tcgcgccgcg catcaaggcg
      541 ccggtcatgg cggggatcgg gttcatcgac acgatctcgc cgccggccgg catctggacg
      601 atgctcaatc aggtggcggc accggtggaa ccgctgccga tgatcgagtc cgagcacgac
      661 aacctgacgc cggacaagag tcgcgcctgc ttcgcgcgcg tcgacgagat cctcgagcac
      721 gtggtgcacg ggggcgtctt caccccacgg taacggcgcc cgcgaaggcg tcagagcgcg
      781 tcgagccgtg ttgccgcatc gccgaactga tccagcgtga cgcccatgcg gtccatcagc
      841 gacaggaaca ggctcgacat cttgcggttc tcgtcgcccg cgtccacgta gttcaacgtc
      901 cgtcccgtct tcagtgtgcc gccgaggcct cccgcgagca ccagcggcag cctcgtgttg
      961 tcgtgcttgc gcccgatcca catgttcgaa agccacatga gacacgagtg gtcgagcacc
     1021 gtgccgtcac cttcgggcat ggcatcgagc ctcgaggcga ggtacgcaag ctggctcaga
     1081 tggaaggtgg cgatgcgcgc gtagccggcg gagttgttct cgtgcgacgc cgcgtgatgc
     1141 ccgtcggcga cgttgaggaa cggatagtag agcgccccga gatcgcgggc gagcagcagc
     1201 gtagcgatgc gcgtcttgtc ggtctggaag gcgatggcga tgaggtcgca catcaaccgc
     1261 gtgtgctcgc gcaggtcttc gggcagtccg ttggccggcc gcggcatggt caacgccggg
     1321 cggttctgcc ccttcgcgcg gtcgtccgct gtgtccttgg ccttgcgcat cgcctcgacg
     1381 cgtttctcca cttcgcgcag gctggtcaga tactcgtcca gctttgcccg gtcgctcgaa
     1441 ctgatcgacc gcccgagcgc cgccgcctcg cccttcgccc ggtcgaggat gctgagatgc
     1501 cgcaggctgc cgcggttctc gaacaggctg tcccaggcga gcgacggata cagctcgttc
     1561 ggcaccggtg aatcggcgct ctgccacgac aggtgcgagc tgtaggccag cgagtagttg
     1621 gtctcgtgaa agccggtcat cggctcttcg caggcgagca cgagactggg cagcgccgtc
     1681 tcctggccga tgcggttggc gagcagctgg tcgatcgtga tgccggcccg gacgatggcg
     1741 cccttctgaa tcaccgatcc ggacagcagg ccgccggtct gcgccgggtg aatgccgttg
     1801 ccggtggcgc gcttgtgaaa cagcccgtga acgacgttga tcttgtgctt gagcggctcg
     1861 agcgggctca gcgtcgcgct caacgtcatc ccggcgccgg aaccctgtga atcccagtga
     1921 tcctcgttga cgccgttgcc catgaagagc accgcaaatc gcttgggaaa caggtcgccg
     1981 ggcgcggccc agacgttcat cgactcgagc cacggcagcg caatcgtcac accggccccg
     2041 cgcaggacgg tgcggcggga gatccccttc gcgcgcgtgt gatggcggtt catcggcgtc
     2101 actccatgcg gcggttcaga aacggcgagc tcgtgacgat cgcctcgacc agactgctga
     2161 aacgataacc gttcgccggc agcttcgcgc gcatctcccg cagcagcacg tcgtcgggca
     2221 ggatcggcga acggttcaat gcgtaggccc agagcttgcg gctgaccgtg ttgaggtagt
     2281 cgtcctggcg gtgctgccgg acgtactccc gcacgccggc ggcgccggac gcgtgaacgc
     2341 cgcccggcag caccgcggcg acctcggtgc ggcgccccgc caggtcgtgc tcgcgccgct
     2401 caccgaccgg gccgaagttc tcgaaggcca ggccgaaggc atcgaaacga gcgtggcagg
     2461 cggcgcaggc cgggttggtg gtgtggaccg ccatccgctc ccggttggtc atgtccgggg
     2521 tgatcttggg gtcctcgaac tggaagttgg cgggcggcgg gggcaccgag gcgcacagca
     2581 cctgctcg
//
LOCUS       DASSYW010001172         2380 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_142516, whole genome shotgun sequence.
ACCESSION   DASSYW010001172 DASSYW010000000
VERSION     DASSYW010001172.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2380)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2380)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2380
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_142516"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..432)
                     /locus_tag="VFN38_18460"
     CDS             complement(<1..432)
                     /locus_tag="VFN38_18460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016624 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HET9013817.1"
                     /translation="MATATKKKSDAAKGDTKSDAALNMELLRSMLRQRRFEERCAEAY
                     ALGKIGGFCHLYIGQEAVSTGSISLLRPDDYVITTYRDHGQALARGMTPRAVMAELFG
                     RQDGCARGKGGSMHMFDANLNFLGGHGIVGGHVPIAAGVGFA"
     gene            complement(555..1463)
                     /gene="lipA"
                     /locus_tag="VFN38_18465"
     CDS             complement(555..1463)
                     /gene="lipA"
                     /locus_tag="VFN38_18465"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016992 - lipoate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0009107 - lipoate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HET9013818.1"
                     /translation="MGEALYQIMGRHQAPALPERKPSWLKVKAPGGPNYLRLKQLMAD
                     KDLNTVCAEAHCPNVGECWEHGTATFMILGNVCTRNCAYCAVAHGRPPKYDPTEPDRV
                     AEAAAVMRLQHVVLTSVDRDDLPDFGAWAFAETVRQIKLRNPATSVEVLVPDFQGNEE
                     SIRTVLAAEPDIYNHNTETVPRLYKRCRPGGRYERVMRIFTTSKRLAPHIPTKTGIIL
                     GMGETNEEIVAVMKDLRAVDVDILTLGQYLRPSDGHIALDRYVTPEDFRRFYEIGMEL
                     GFRHVESGPLVRSSYHAWEQVQAAGV"
     gene            complement(1664..>2380)
                     /locus_tag="VFN38_18470"
     CDS             complement(1664..>2380)
                     /locus_tag="VFN38_18470"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HET9013819.1"
                     /translation="LEPALAAHPGAILHPGDGAVDNVSLMAALDVAVARQARITRLTD
                     EVASFDASGNLPAFRSRGGTRYGSRRLLVAGGAWAGGLPGLPRPLPIQPVRGQLARLE
                     GLPIRHATHMADGYLVPRGGTVIVGATSENAGFECATTPRGLATLRGIATRAIPVLSH
                     APVAEHWAGLRPVTPDGLPIMGRDPSQAALFYACGYSRNGILFGPWAAELLASVLAGA
                     AAPAALAPFGVERFLPTPRG"
BASE COUNT          346 a          797 c          871 g          366 t
ORIGIN      
        1 ggcgaagccg acgccggccg cgatgggcac gtgcccgccg acgatgccgt gcccgccgag
       61 gaagttgagg ttggcgtcga acatgtgcat cgagccgccc ttgccgcgcg cgcagccgtc
      121 ctgccgcccg aacagctcgg ccatcaccgc gcgcggcgtc atcccgcgcg ccagcgcctg
      181 cccgtgatcg cggtaggtcg tgatgacgta gtcatcgggg cgcagcaggg agatggagcc
      241 ggtgctcacc gcctcctgcc cgatgtagag gtggcagaag ccgccgatct tgccgagggc
      301 gtacgcttcg gcgcaccgct cctcgaagcg gcgctgccgg agcatcgagc gcaacagctc
      361 catgttgagc gcggcgtcgg atttcgtgtc gcctttcgcg gcgtctgatt tcttcttcgt
      421 tgcggtggcc atgacgacgg tgaacggtga acggtgagcc aatcactcgt gggacgtgcg
      481 acgtgggacg tgacgggagc gtggcgtgcg gagtgccggc cggtgacgct tcacgaatca
      541 cgcctcgcgg tcgttcaaac tccggctgcc tggacctgct cccacgcgtg gtagctggag
      601 cgcaccaggg gaccgctctc cacgtgccgg aagccgagct ccatgccgat ctcgtagaag
      661 cggcggaaat cctcgggggt gacgtaccgg tccagggcga tgtggccgtc cgacggacgc
      721 aggtactgac cgagcgtgag gatgtccacg tcgaccgccc gcagatcctt catcacggcg
      781 acgatctcct cgttcgtctc gcccatgccg aggatgatcc ccgtcttggt ggggatgtgc
      841 ggcgcgaggc gcttcgaggt ggtgaagatc cgcatcacgc gctcgtagcg gccgcccgga
      901 cggcagcgct tgtacaggcg cggcaccgtc tcggtgttgt ggttgtagat gtccggctcc
      961 gcggcgagca cggtgcggat cgactcctcg tttccctgga agtcggggac gagcacctcc
     1021 accgacgtcg ccgggttgcg gagcttgatc tggcggacgg tctcggcgaa ggcccacgcg
     1081 ccgaagtcgg ggaggtcgtc gcggtcgacg gaggtcagca cgacgtgctg gagccgcatc
     1141 acggccgccg cttcggcgac gcggtcgggc tccgtggggt cgtacttcgg cggccggccg
     1201 tgtgcgacgg cgcaataggc gcagttccgc gtgcagacgt tgccgaggat catgaacgtc
     1261 gccgtgccat gctcccagca ctcgccgacg ttcgggcagt gcgcctcggc gcacaccgtg
     1321 ttcagatcct tgtccgccat gagctgcttc aggcggaggt agttcggtcc tcccggcgcc
     1381 ttcaccttca gccaggacgg cttacgctcg gggagcgcgg gcgcctgatg gcggcccatg
     1441 atctggtaca gtgcttcgcc catgacgggt ggtctgacgg tcgagcggtc ggacggtcgg
     1501 acagcgacgg ccagaccagg gaacggaccc ccgaacgagc acggggacgg cgggcgcaac
     1561 gtgttgacgg agcggaaact agctcgcgtt cccggagggt gtaagcctgt ctaaccttct
     1621 actgctattt gaatggttac caaccggctc gggccgcggg aggtcagccc cgtggggtcg
     1681 ggaggaaccg ttccaccccg aacggcgcca gcgcagccgg cgcggccgcc ccggccagca
     1741 cggaggccag cagctcggcc gcccaggggc cgaagaggat cccgttgcgt gagtatccgc
     1801 aggcgtagaa cagcgccgcc tggctgggat cccggcccat gatgggaagg ccatccgggg
     1861 tcaccggccg caggccggcc cagtgctccg cgaccggggc gtggctcagg acggggatgg
     1921 cccgggtcgc gatcccgcgc agggtcgcga ggccgcgcgg cgtggtcgcg cactcgaagc
     1981 ccgcattctc gctcgtcgcc ccgacgatca ccgtgcctcc gcgcggcacg agatacccgt
     2041 ccgccatgtg ggtcgcgtgc cggatgggga gcccttcgag cctcgcgagc tgtccgcgca
     2101 cgggctgaat ggggagcggt cgcgggagcc cagggagccc gcccgcccaa gcgccccccg
     2161 ccacgagcag ccgacggctg ccgtagcgcg tgccgccgcg agaacggaag gccgggaggt
     2221 ttccgctggc gtcgaacgac gcgacttcgt cggtgaggcg ggtgatgcgc gcctgtcgcg
     2281 ccacggcgac atcgagcgcc gccatcagcg acacgttgtc caccgcgccg tcgcccgggt
     2341 gcaggatcgc ccccgggtgt gcggcgagcg ccggctcgag
//
LOCUS       DASSYW010001173         2178 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_621596, whole genome shotgun sequence.
ACCESSION   DASSYW010001173 DASSYW010000000
VERSION     DASSYW010001173.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2178)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2178)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2178
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_621596"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..251)
                     /locus_tag="VFN38_18475"
     CDS             complement(<1..251)
                     /locus_tag="VFN38_18475"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HET9013820.1"
                     /translation="MHTLARGLDYVDLNFLGRPEIIATAVLQAPGGVALVDPGPETAL
                     QGLLKSLQAQGIGTTDIRQILLTHIHLDHAGAAGTLVAK"
     gene            299..613
                     /gene="clpS"
                     /locus_tag="VFN38_18480"
     CDS             299..613
                     /gene="clpS"
                     /locus_tag="VFN38_18480"
                     /inference="COORDINATES: protein motif:HMM:NF000672.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adapter ClpS"
                     /protein_id="HET9013821.1"
                     /translation="MGDSERRTGGEVLERTRHETKKPELFKVLLINDDYTTMDFVVDI
                     LENVFHKQPSEAYRIMMAVHTQGKGLCGVYPHEVAETKVATVIELARENGFPLLAAME
                     PE"
     gene            749..>2178
                     /locus_tag="VFN38_18485"
     CDS             749..>2178
                     /locus_tag="VFN38_18485"
                     /inference="COORDINATES: protein motif:HMM:NF012234.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HET9013822.1"
                     /translation="MFSPALEIVLTVAYREATARRHTHLTLEHLLYALAHDPEGERIL
                     TACGADMPQLRRDLDKYLQESVEQFARGQQKEPEQTLAFRRVLQTAVLHVQSAGRQEV
                     HSGDVIAATLQQNRSHAAQLLAAQGITRLDVLEYIAHGKTKVPPATPGGSDSDPSDAE
                     AGIGERGGATSRDPLSAYAANLTARAQAGELDPLIGRTDELQRTMEILCRRRKNNPVF
                     VGDAGVGKTALAEGLAARLLDDDVPDVLRGAEVFSLDTGALLAGTRFRGDFEERFKAV
                     IQALSKRPMPILFIDEIHSTVGAGATTGGTMDLATLIKPILTTGQLRVIGSTTHEEFK
                     HIEKDRALARRLQKIVIDEPSIPETVRILKGLRSRYEGHHRVRYTDDALEAAAKLAAR
                     HLRDYKLPDSAIDVLDEAGAKTRLTRGAQAAAAGGDAAGKASASAEPPPIEINGANIE
                     EVIARMARIPAKQASSSDRDRLQSLE"
BASE COUNT          410 a          736 c          737 g          295 t
ORIGIN      
        1 ttcttcgcga cgagggtgcc ggccgcgccg gcgtggtcga gatggatatg cgtcagcagg
       61 atctggcgga tgtccgtcgt cccaatcccc tgtgcctgca aggacttcag cagcccctgg
      121 agggccgtct caggacccgg atcgacgagg gcgacgccgc cgggggcctg gagaaccgcc
      181 gtcgcgatga tttccggccg cccgaggaag ttgaggtcga cgtagtcgag cccgcgcgcg
      241 agcgtgtgca tcggattgag ggattctatc gtaggcctgc taaaatcgac ggagacgcat
      301 gggcgacagc gaacgtcgaa ctggcggcga ggtgctggag cggacgcggc acgagaccaa
      361 gaagcccgag ctcttcaaag tcctcctgat caacgacgac tacacgacga tggatttcgt
      421 cgtcgacatc ctcgagaacg tctttcacaa gcagccgtcc gaggcgtatc gcatcatgat
      481 ggcggtgcac acgcagggca aagggctatg cggcgtctac ccgcacgagg tggcggagac
      541 gaaggtcgcg acggtgatcg agctcgcgcg cgagaacggc ttcccgctcc tcgccgccat
      601 ggaacctgaa tagcagttcg gtggtcgtaa ctaacagagg cccggcaggc gccataacgc
      661 aacactgagc agaagaccgg accgggtacg tcgcgagcgg aagcgagcga cgacaggctt
      721 gggggtgggg gcccaagcac actaacaaat gttcagccct gcactcgaaa tcgtcctgac
      781 cgtcgcctat cgcgaagcga ctgcgcggcg gcacacgcac ctgacgctcg agcacctgct
      841 ctatgcgctc gcgcacgatc ccgaaggcga gcgcatcctg acggcgtgcg gcgccgacat
      901 gccgcagctg cgccgcgacc tcgacaagta ccttcaggag tcggtcgagc agttcgcgcg
      961 cggccagcag aaggagccgg agcagacgct ggctttccgg cgcgtgctgc agacggcggt
     1021 cctgcacgtg cagagcgccg gccgccagga agtccactcc ggcgacgtga tcgcggcgac
     1081 gctgcagcag aaccgctcgc acgcggcgca actgctcgcc gcccagggca tcacccggct
     1141 cgacgtcctc gagtacatcg cacacggcaa gacgaaggtt ccacccgcga cgcccggcgg
     1201 gtccgacagc gatccgtccg atgccgaagc cggcatcggc gagcgcggcg gcgcgacgtc
     1261 gcgcgatccg ctgtctgcat atgccgccaa cctcacggcc agggcgcagg cgggagagct
     1321 cgatccgctg atcggccgca ccgacgagct ccagcgcacg atggagatcc tgtgccgccg
     1381 ccgcaagaac aacccggtgt tcgtcggcga cgccggcgtc ggcaagacgg cgctggcgga
     1441 aggccttgcc gcgcgcctcc tcgacgatga cgtccccgac gtgctgcgcg gggcggaggt
     1501 gttctcgctc gataccggcg cgctgctcgc gggcacgcgg ttccgcggcg acttcgaaga
     1561 gcgcttcaag gcggtgatcc aggcgctgtc gaaacggccg atgccgatcc tgttcatcga
     1621 cgagatccac tcgaccgtcg gcgccggcgc caccaccggc ggcacgatgg atctggcaac
     1681 gctgatcaag ccgatcctca cgaccggcca gctgcgcgtg atcggttcga cgacgcacga
     1741 agagttcaag cacatcgaga aggaccgcgc gctcgcgcgg cggctgcaga agatcgtcat
     1801 cgacgagccc tcgattcccg aaaccgtcag gatcctgaag ggcctgcgct cgcgctacga
     1861 aggtcaccat cgcgtgcgct ataccgacga cgcgctcgag gcggccgcga agctggcggc
     1921 acgccacttg cgcgactaca agctgccgga cagcgccatc gacgtgctcg acgaggccgg
     1981 cgctaaaacc cgcctcacgc gcggcgcgca ggccgctgcc gccggcggcg acgccgccgg
     2041 caaggcgtcc gcgagcgcgg agccgccgcc gatcgagatc aacggcgcga acatcgaaga
     2101 agtgatcgcg aggatggcgc ggatcccggc caaacaggcg tcttcatccg accgcgaccg
     2161 cctgcagtcg ctcgagga
//
LOCUS       DASSYW010001174         2602 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_179537, whole genome shotgun sequence.
ACCESSION   DASSYW010001174 DASSYW010000000
VERSION     DASSYW010001174.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2602)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2602)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2602
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_179537"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..630)
                     /locus_tag="VFN38_18490"
     CDS             complement(<1..630)
                     /locus_tag="VFN38_18490"
                     /EC_number="4.2.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF012678.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016829 - lyase activity [Evidence IEA];
                     GO_function: GO:0030554 - adenyl nucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase family protein"
                     /protein_id="HET9013823.1"
                     /translation="MTTLMTRAPAHVVDAGGYRVTIGAGLRHDLGVQIAVAAPAHHNA
                     IVTDDHVAALYAESVVATMGRHGRTSVHRMAPGESHKTRDTWARLTDDLLAAGCGRDT
                     TVVALGGGVVGDMAGFVAATYMRGVPVVQCPTSLLAMIDASVGGKTGVDTAAGKNLVG
                     AFHPPAAVLIDVETLGTLPAAQLRAGLAEAIKHGVVADAAYVARIESLLP"
     gene            complement(632..1177)
                     /locus_tag="VFN38_18495"
     CDS             complement(632..1177)
                     /locus_tag="VFN38_18495"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008817 - corrinoid adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cob(I)yrinic acid a,c-diamide
                     adenosyltransferase"
                     /protein_id="HET9013824.1"
                     /translation="MKIYTKTGDQGSTGLFGGGRVPKDHIRVEAYGDVDELNAVIGVA
                     RSVEMMPRIDEVLVPVQRDLFAIGALLATPDRDKMAQHLEKARIDDGRIGELERAIDE
                     GEAELEPLRAFIIPGGTPKAAALHVARTVCRRAERHVVRLQHEVDLPPLAVIYLNRLS
                     DLLFTLARVANRRAGAGEVTW"
     gene            1232..2254
                     /locus_tag="VFN38_18500"
     CDS             1232..2254
                     /locus_tag="VFN38_18500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HET9013825.1"
                     /translation="MDHPLKDITIIGGGPAGIFALFYAGMRGASAQIVDALPELGGQL
                     TALYPEKFIFDVAGYPKVLAKDLVRALREQAAQFNEPAHLAQAVTGLEQRDGHFVLHT
                     AKGEYPTRSIIIAAGIGAFSPRRLPQPCAEPWYGRGIYDVVTDPQEYKGQRVVIVGGG
                     DSAFDWATQLRGVATHVSLVHRSDRFRAHGATVSQFEEDVKAGRASMFTFHELADVLC
                     KPAGERFTHLVLKQVKTKATTEIEADVVLPMLGFVSDIGPIADWGLTLEKDEIVVNQL
                     METGRPGIWAAGDVTTYPGKLKLIACGFGEAATAVNQAVHWIYPEKKVAPGHSSNMAV
                     FGQKYD"
     gene            complement(2266..>2602)
                     /locus_tag="VFN38_18505"
     CDS             complement(2266..>2602)
                     /locus_tag="VFN38_18505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013826.1"
                     /translation="REVARRYWIFLPSAFLAERSAFARRPAAAPDVSVTAQAIAERKA
                     ALLRQPASRLMLPYQKVIRMHLLIFFFAFAHYMRLDNFAVYAVVYAVYFFPWRLLRAT
                     PATVEITPA"
BASE COUNT          419 a          877 c          932 g          374 t
ORIGIN      
        1 gggcagcagc gactcgatgc gcgcgacgta cgccgcgtcg gccacgacac cgtgcttgat
       61 cgcttccgcg agcccggccc ggagctgggc ggcggggagc gtgccgagcg tctcgacgtc
      121 gatcagcacc gccgccggcg gatggaaggc gccgacgagg ttcttcccgg ccgcggtatc
      181 cacgccggtc ttgccgccga ccgaggcgtc gatcatggcg agcagggagg tcggacactg
      241 caccacgggc acgccgcgca tgtaggtggc ggcgacgaag ccggccatgt cgcccacgac
      301 gccgcccccg agggcgacga cggtcgtgtc gcgaccgcag cccgcggcca gcaggtcgtc
      361 ggtgagccgc gcccaggtgt cgcgcgtctt gtgcgactcg cccggcgcca tgcggtgcac
      421 ggaggtccgt ccatgacgcc ccatcgtggc gacgaccgac tcggcgtaga gcgccgcgac
      481 gtgatcgtcg gtcacgatgg cgttgtgatg cgccggcgca gccacggcga tctgcacgcc
      541 aaggtcatgg cgcaggcctg caccgatggt gacgcgatag ccaccggcat ccacgacgtg
      601 cgccggcgca cgagtcatga gcgtggtcat cctaccaggt cacttcgccg gccccggcgc
      661 gacgattggc gacgcgggcg agggtgaaga gcagatccga caggcgattc aggtagataa
      721 cggcgagcgg ggggagatcg acctcgtgct ggagccgcac gacgtggcgc tccgcgcgcc
      781 ggcacacggt gcgcgccacg tggagcgcgg ccgccttggg ggtcccgcca ggaatgatga
      841 aggccctgag cggctcgagc tccgcctcgc cctcgtcgat ggcgcgctcg agctctccga
      901 tccgcccgtc gtcgatccgc gccttttcca gatgctgcgc catcttgtcg cggtcggggg
      961 tggcaaggag ggcgccgatg gcgaagaggt cgcgctggac gggcacgagg acctcgtcga
     1021 tgcgcggcat catctcgacg gagcgagcta ctccaatgac ggcgttgagc tcgtcgacgt
     1081 caccatatgc ctcgacgcgg atgtgatcct tggggacacg gccgccgccg aagagtccgg
     1141 tagagccctg gtcgccggtc ttcgtgtaga tcttcatgcg cggaatatag ggcgctcggc
     1201 cgacttcgcc tccgccctat atttcgccgc catggatcat cccctcaagg acatcacgat
     1261 catcggcggg ggccccgccg gcatcttcgc gctcttctac gccggcatgc gcggcgcctc
     1321 ggcgcagatc gtcgacgcgc tccccgagct cggcggccag ctgacggcgc tgtacccgga
     1381 gaagttcatc ttcgacgtcg ccggctaccc caaggtgctg gccaaggatc tcgtgcgcgc
     1441 gctgcgcgag caggccgcgc agttcaacga gcccgcgcac ctcgcgcagg ccgtgaccgg
     1501 actcgagcaa cgcgacgggc atttcgtgct gcacacggcc aagggggagt atcccaccag
     1561 gtcgatcatc atcgccgccg ggatcggcgc cttctcgccg cggcgcctgc cgcagccgtg
     1621 cgccgagccc tggtacgggc gcgggatcta cgacgtcgtc accgatccgc aggagtacaa
     1681 ggggcagcgc gtggtgatcg tcgggggcgg cgactcggcg ttcgactggg cgacgcagct
     1741 gcgcggcgtg gcgacgcacg tgtcgctcgt gcatcgcagc gaccggttcc gcgcgcacgg
     1801 cgccacggtc agccagttcg aggaggacgt gaaggcgggg cgcgcgtcga tgttcacctt
     1861 ccacgagctc gccgacgtgc tgtgcaagcc ggcgggggag cggttcaccc atctcgtgct
     1921 caagcaggtg aagaccaagg cgacgacgga gatcgaggcc gacgtcgtgc ttcccatgct
     1981 cggcttcgtg agcgacatcg gaccgatcgc cgactggggg ctcaccctgg agaaggacga
     2041 gatcgtcgtc aaccagctca tggagaccgg tcgcccgggc atctgggcgg cgggggacgt
     2101 gaccacctac ccgggcaagc tcaagctgat cgcctgcggc ttcggcgagg cggcgacggc
     2161 ggtgaaccag gccgtgcact ggatctaccc ggagaagaag gtggcgcccg gccactccag
     2221 caacatggcc gtgttcggcc agaagtacga ctagggcccc tcagctcacg ccggcgtgat
     2281 ctcgacggtg gccggcgtgg cgcgcagcag acgccacgga aagaagtaca cggcgtacac
     2341 caccgcgtac acggcgaagt tgtccagccg catgtaatgc gcgaacgcga agaagaagat
     2401 cagcaggtgc atgcggatca ccttctggta cggcagcatc agcctgctcg cgggctggcg
     2461 caacagcgcg gccttgcgct cggcgatcgc ctgcgccgtc accgagacgt cgggggctgc
     2521 cgcgggacgt cgggcgaagg cgctgcgttc ggccaggaag gcggacggga ggaagatcca
     2581 gtaccgccgc gccacttcgc gg
//
LOCUS       DASSYW010001175         3732 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1369178, whole genome shotgun sequence.
ACCESSION   DASSYW010001175 DASSYW010000000
VERSION     DASSYW010001175.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3732)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3732)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3732
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1369178"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            192..770
                     /locus_tag="VFN38_18510"
     CDS             192..770
                     /locus_tag="VFN38_18510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013827.1"
                     /translation="MPPTRPLRIVVVALAVLAVACGDPTKPKATYTNAPSTYALYAFT
                     GAPVNAATAISFLGGAARADANFAFDVAFDLDASGRPVIYPVRAIASDLAGAVKRVGL
                     QVVTGPFESVREAPATGYDTLAAKTVNVGDVLAVELLDLNSCQYSLGGQTLYAKLTVD
                     SVNTASRKLYARTVLDPNCGYRSVVADSIPTF"
     gene            770..2044
                     /gene="serS"
                     /locus_tag="VFN38_18515"
     CDS             770..2044
                     /gene="serS"
                     /locus_tag="VFN38_18515"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004828 - serine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006434 - seryl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HET9013828.1"
                     /translation="MHDVRLVRERLGDLREAMRRRGALDALAPQLDRCEHLEQERRLL
                     IQALEERKAARNVASQEVARRKKAGEAADDLIAQGRAQGEEIARLESELAAAEGALTR
                     ILAEVPNMTLADVPEGGEENNVIVRSWGEPRPSEGVKPHWEIAAAQGMLDLERGAKIS
                     GSGFPVYRGIGARLVRALMSYFLGLHTERHGYEEVWPPSLVNRASMTGTGQLPKFEDD
                     AYRLPDDELFLIPTAEVPVTNLYRDEILDGGTLPRGFTAYTPCFRREAGSAGKDTRGI
                     LRVHQFDKVELVRYAAPEDSSAQLELMLGHAEAALRGLEIPYRVKLLAAGDTGFSSAK
                     TYDLEAWAPGVGAWLEVSSASTFTDFQARRANIRYRPGKGEKPRFVHTLNASALAFPR
                     TIACILEHHQQPDGTVVVPAVLRPYLGTDRLG"
     gene            2048..3190
                     /locus_tag="VFN38_18520"
     CDS             2048..3190
                     /locus_tag="VFN38_18520"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HET9013829.1"
                     /translation="MRRGAPELLVALVLAVLLASYVVYTQRVVRELRREALRSSRMYA
                     RVFRAQSDTSEGAGTQALFDLSKSIVEQGVPLIVTDSAGRPTAQANLPPEVASDEGAV
                     RDYVRQLDRQNAPVVDSLVGQIHYGNTPLVQWLRIIPALQAATAFVLLILAVSIVRTR
                     GDAERERVLAGMARESAHQLGTPLSSLAGWIELIEEGAPDATTLSAVTHMRADLERLD
                     RVAHRFERIGRERRRDQVDLHALVDRITRYFRARVPTLAHQVAIDVAAHAEPVSVTGD
                     AVLLEWALEVLVKNSVDALAGRGGRIAVSARRRPDGGAIVTVADDGPGIPRDHRARIF
                     EPGFSTKQSGWGIGLALARRIVEENHGGTLRLLSTDRGATFEIILP"
     gene            3190..>3732
                     /locus_tag="VFN38_18525"
     CDS             3190..>3732
                     /locus_tag="VFN38_18525"
                     /inference="COORDINATES: protein motif:HMM:NF012789.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HET9013830.1"
                     /translation="MTIATDDPLLEGLNPAQREAVLHVAGPLLVLAGAGSGKTRVLTT
                     RLARLIDQHGVDPSRILAVTFTNKAAGEMKERIARLLGRQPTGMWVGTFHAIGARMLR
                     GAPHLVGRTPSFTIYDQDDTGSVVKRIMERHRINPKQFTPRGVHAAISDAKNSLVPPD
                     EYANLAMDPFSRAVAAVYRDL"
BASE COUNT          557 a         1375 c         1286 g          514 t
ORIGIN      
        1 tgcctccacc ccgtcacgct gtcgaatcgc gcctacgagg tcgcggatgc tcgccatgcc
       61 cactccgaat cggaaagtgg acaagctgag gaccgacgag agtgaagtca agcgacgcag
      121 tcgcttgagt ttgcccgcgt ccgcccctat cgtatccaca gcccgcacca cgtcacgtcc
      181 cagcctcgat catgccgccg acacgcccgt tgcgcatcgt cgtcgtggcc ctcgccgtgc
      241 tcgccgtcgc ctgtggcgac ccgaccaagc cgaaggccac gtacacgaac gcgcccagca
      301 cctacgcgct ctacgcgttc accggcgcgc cggtcaacgc cgccaccgcc atcagctttc
      361 tcggcggcgc cgcgcgggcc gacgccaact tcgccttcga cgtcgcgttc gacctcgacg
      421 cgagcggccg gccggtgatc tacccggtgc gcgcgatcgc cagcgacctg gcgggggccg
      481 tgaagcgcgt gggcctgcag gtcgtcaccg ggccgttcga gtcggtgcgc gaggcgcccg
      541 ccaccgggta cgacaccctc gccgccaaga cggtgaacgt cggcgacgtg ctcgccgtcg
      601 agctgctcga cctcaacagc tgccagtaca gcctcggcgg acagacgctg tacgcgaagc
      661 tcacggtgga cagcgtcaac accgcctcgc gcaagctgta cgcgcgcacg gtgctcgacc
      721 ccaactgcgg ctaccgctcg gtcgtggcgg actcgattcc caccttctga tgcacgacgt
      781 tcggctggtc cgcgagcggc tcggcgatct gcgcgaggcg atgcgccggc gcggcgccct
      841 cgacgcgctg gcgccgcagc tggaccgctg cgagcacctg gagcaggagc gtcgtctgct
      901 catccaggcg ctcgaggagc gcaaggccgc gcgcaacgtc gcgtcgcagg aggtcgcgcg
      961 gcggaagaag gcgggcgaag cggcggacga cctgatcgcg caggggcgcg cacagggcga
     1021 ggagatcgca cgcctcgaga gcgagctggc cgcggcggaa ggcgcgctca cgcgcatcct
     1081 cgccgaagtg cccaacatga cgctcgccga cgtgccggaa gggggcgagg agaacaacgt
     1141 catcgtgcgg agctggggcg agccgcgccc gtcggaaggc gtgaagcctc actgggagat
     1201 cgccgccgca caggggatgc tcgatctcga gcgcggcgcg aagatcagcg ggtcgggctt
     1261 cccggtctac cgcggcatcg gcgcgcggct cgtgcgcgcg ttgatgagct acttcctcgg
     1321 cctgcacacc gagcgccatg gctacgagga ggtctggccg ccctcgctcg tcaatcgcgc
     1381 gtcgatgacc ggcaccggcc agctgccgaa gttcgaggac gacgcctacc gcctgccgga
     1441 cgacgagctg ttcctcatcc ccacggcgga ggtgcccgtc acgaacctct atcgtgatga
     1501 gatcctcgac ggggggacgc tgccgcgcgg gttcacggcg tacacgccct gcttccgccg
     1561 cgaggcgggg tcggcgggca aggacacgcg cggcatcctg cgcgtccacc agttcgacaa
     1621 ggtggagctg gtgcggtacg ccgcgcccga ggactcgagc gcccagctgg agctgatgct
     1681 cggccatgcg gaagcggcat tgcgcgggct cgagataccc tatcgcgtga agctgctcgc
     1741 cgccggcgac accggcttct ccagcgcgaa gacgtacgac ctcgaagcgt gggcgccggg
     1801 cgtcggcgcg tggctggagg tcagctcggc gagcaccttc accgacttcc aggcgcggcg
     1861 cgccaacatc cgctaccgtc ccggcaaggg cgagaagccg cggttcgtgc acacgctgaa
     1921 cgcgtcggcg ctcgcgttcc cgcggaccat cgcctgcatc ctcgagcacc atcagcagcc
     1981 ggatggcacc gtcgtcgtcc ccgcggtgct gcggccgtat ctgggaaccg accggctcgg
     2041 ctagccgatg cgccgcggcg ctcccgagct gctcgtcgcc ctcgtgctgg cggtcctgct
     2101 cgcgtcgtac gtggtgtaca cccagcgcgt cgtgcgcgag ctgcggcgcg aggcgctccg
     2161 ctccagccgg atgtacgcgc gcgtctttcg cgcccagagc gacacgagcg aaggggccgg
     2221 cacccaggcc ctgttcgacc tctccaagag catcgtggag cagggggtcc cgctcatcgt
     2281 gaccgacagc gcggggcggc cgacggcgca ggcgaacctt ccccccgagg tggcgagcga
     2341 cgaaggcgcc gtgcgcgact acgtgcgcca gctcgaccgg cagaacgccc ccgtcgtcga
     2401 ctccctggtg ggacagatcc actacggcaa cacgccgctc gtgcagtggc tgcggatcat
     2461 tcccgccttg caggcggcca cggcgttcgt gctgctcatc ctcgcggtgt ccatcgtccg
     2521 cacgcgcggc gacgccgagc gcgagcgcgt gctggcgggc atggcgcgcg agtcggcgca
     2581 ccagctcggg acgccgctgt cgagcctcgc gggctggatc gagctgatcg aggagggcgc
     2641 accggacgca acgaccctca gcgccgtcac ccacatgcgc gccgatctgg agcggctgga
     2701 tcgcgtggcc caccgcttcg aacggatcgg ccgcgagcgg cgccgcgacc aggtggacct
     2761 gcacgcgctc gtcgaccgga tcacgcgcta cttccgcgcg cgcgtgccca cgctcgccca
     2821 ccaggtggcg atcgacgtag ccgcccatgc cgagcccgtg tccgtcaccg gcgatgcggt
     2881 gctgctggaa tgggcgctcg aggtgctggt caagaactcc gtcgatgcgc tggcggggcg
     2941 tggtggccgt atcgccgtct cggcgcggcg gcgccccgat ggcggcgcca tcgtcacggt
     3001 ggccgacgac ggcccgggca tcccgcgcga ccaccgcgcc cgcatcttcg agcccggctt
     3061 ctccaccaag cagagcgggt gggggatcgg gctggcgctc gcgcggcgca tcgtggagga
     3121 gaatcacggc gggacgctgc ggctcctctc caccgatcgc ggcgcgacgt tcgagattat
     3181 cttaccgtga tgaccatcgc gaccgacgac ccgctgctcg aggggctcaa tcccgcgcag
     3241 cgcgaagccg tgctgcacgt cgccggcccc ctcctcgtgc tcgccggcgc gggctcgggc
     3301 aagacgcgcg tgctcacgac gcgcctcgcg cggctcatcg accagcacgg ggtggatccg
     3361 agccggatcc tcgccgtcac cttcaccaac aaggccgccg gcgagatgaa ggagcgcatc
     3421 gcgcgcctcc tcggccggca gcccaccggc atgtgggtcg ggaccttcca cgccatcggc
     3481 gcgcggatgc tgcgcggcgc gccgcacctc gtcggccgca cgccgtcgtt cacgatctac
     3541 gatcaggacg acacgggcag cgtggtgaag cgcatcatgg agcggcaccg gatcaacccc
     3601 aagcagttca caccgcgcgg cgtgcacgcc gccatctccg acgccaagaa ctcgctcgtc
     3661 ccccctgacg agtacgcgaa cctggcgatg gaccccttct cgcgcgccgt ggccgccgtg
     3721 taccgcgacc tc
//
LOCUS       DASSYW010001176         2174 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1137595, whole genome shotgun sequence.
ACCESSION   DASSYW010001176 DASSYW010000000
VERSION     DASSYW010001176.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2174)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2174)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2174
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1137595"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(180..1190)
                     /locus_tag="VFN38_18530"
     CDS             complement(180..1190)
                     /locus_tag="VFN38_18530"
                     /inference="COORDINATES: protein motif:HMM:NF020039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HET9013831.1"
                     /translation="MHLTRRTARGAGAILPLLMLAACGDSGRKASADSATSAAKAAAD
                     SASTKGGAAAATPAAYVRAATIKGGFKTPESVKYDADLDIYFVSNINGNPSQKDGNGF
                     ISRVRTDNGTVEELRFIEGGKNRVVLNGPKGLAIVGDTLIVADIDAVRMFNKRTGLPI
                     ATVDLASKKATFLNDVAVGPDGAIYVTDTGVHFGPQGELTHPGTDQVFRIAGRTATVA
                     VASPTLAGPNGITWDQANGRFIIVPFSSKSLMTWKPGDASPAEMVTGAGQFDGVELLD
                     GGRVLVSSWADSSVTLFEGNTATKVATGVPSPADIGIDTKRHKLLVPIFTGDSVQVFD
                     MK"
     gene            complement(1322..>2174)
                     /locus_tag="VFN38_18535"
     CDS             complement(1322..>2174)
                     /locus_tag="VFN38_18535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013832.1"
                     /translation="ADYLRTYRTRLAAVGPADLAATARAVVRPSQALIVVVGDATKIY
                     DKLKAIAPVRLLGPDGSPLAPADLTARAKALDVDLAKLVARQDSFTVTVQGNPLGYQR
                     TALEKTPAGFRYTSQLQIATAVQQSMDLTLSDRLDMQALHVTGTVQGQAIRTDVTFAG
                     GRATGSAMAPSPQGIKTTSVDVAVPAGAVNDAALNAIVPALHWAPGAKFGVSLFSASK
                     NSVVPGSLAVSGTEKVTVPAGTFDVYRAELTGGDQPVTLYVTTAAPNRMVKMAIVGTP
                     LEIVLVK"
BASE COUNT          312 a          747 c          760 g          355 t
ORIGIN      
        1 ggggcagggg gagagctcgt aggcggggga gcggaagatc atgaaacaag atgacgaagg
       61 acgaaggaat gaggaatgac gagaggcagg aatgaggaat gaggaatgag ggacgggatg
      121 ctacgactgg cgtcccgtcc ctcattcctc attcctcatt cctcattcct gctctgcagt
      181 cacttcatgt cgaacacctg cacgctgtcc cccgtgaaga tcggcaccag cagcttgtgc
      241 cgcttcgtgt cgatgccgat gtcggccggg gagggaacgc cggtggcgac cttcgtcgcg
      301 gtgttcccct cgaagagggt gaccgacgag tccgcccagc tcgagacgag cacgcggccg
      361 ccgtcgagca gctcgacgcc gtcgaactgc cccgctcccg tcaccatctc ggccggcgag
      421 gcgtcgcccg gcttccacgt catcagcgac ttggaggaga aggggacgat gatgaagcgg
      481 ccgttcgcct ggtcccaggt gatcccgttc gggccggcga gcgtcggcga cgcgacggcg
      541 acggtcgccg tgcggccggc gatcctgaag acctggtcgg tgcccggatg cgtcagctct
      601 ccctgcgggc cgaagtggac gcccgtgtcg gtgacgtaga tcgcgccgtc ggggcccacc
      661 gccacgtcgt tgaggaaggt cgccttcttc gacgccaggt ccaccgtggc gatcggcagg
      721 ccggtgcgct tgttgaacat ccgcaccgcg tcgatgtcgg cgacgatcag ggtgtcgccg
      781 acgatcgcca gccccttggg cccgttgagc acgacgcggt tcttcccccc ctcgatgaag
      841 cgcagctcct cgacggtgcc gttgtcggtg cgcacgcggc tgatgaagcc gttgccgtcc
      901 ttctgcgacg ggttgccgtt gatgttcgag acgaaataga tgtcgagatc ggcgtcgtac
      961 ttcaccgact cgggcgtctt gaagcctccc ttgatcgtcg ccgcgcgcac gtaggccgcc
     1021 ggcgtcgcgg ccgcggcccc gcccttcgtg ctcgcgctat ccgccgccgc cttcgccgcg
     1081 ctggtcgcgc tgtcggccga cgccttccgg ccggagtcgc cgcaggccgc cagcatgagc
     1141 agcggcagga tcgcccccgc gccgcgcgcg gtccgtctcg tgagatgcat gcgtggaatc
     1201 ctcgtatgaa tggtcggcac gacacacctc gaagaagata tcacgcccgg aggttccgga
     1261 acggaacggg cggcgcccgt gagagcgccg cccgtccgtc cgttcgtcgt ccccgatcgc
     1321 cctacttgac cagcacgatc tccagcggcg tcccgacgat cgccatcttc accatccggt
     1381 tcggcgccgc cgtcgtgacg tagagcgtca ccggctggtc cccccccgtg agctcggcgc
     1441 ggtagacgtc gaacgtcccc gccggcacgg tcaccttctc cgtgcccgag acggcgagcg
     1501 agccgggcac gacgctgttc ttgctcgccg agaagaggct gacgccgaac ttcgcgcccg
     1561 gcgcccagtg gagcgcgggc acgatcgcgt tcagcgcggc gtcgttcacc gcgcccgccg
     1621 gaaccgcgac gtccacgctc gtcgtcttga tcccctgcgg cgacggcgcc atcgcggagc
     1681 cggtcgcgcg gccgccggcg aaggtgacgt cggtcctgat cgcctgcccc tgcacggtcc
     1741 ccgtgacgtg cagcgcctgc atgtcgagcc tgtcgctcag cgtcaggtcc atggactgct
     1801 gcacggcggt cgcgatctgg agctggctcg tgtagcggaa gccggccggc gtcttctcga
     1861 gcgccgtgcg ctggtagccg agcgggttcc cctggacggt caccgtgaag ctgtcctggc
     1921 gggcgaccag cttcgcgaga tccacgtcga gagctttggc gcgtgccgtg aggtcggccg
     1981 gcgcgagcgg cgagccgtcg gggccgagga ggcgcaccgg cgcgatcgcc ttgagcttgt
     2041 cgtagatctt ggtcgcgtcg ccgacgacga cgatcagcgc ctgcgacggc cgcacgacgg
     2101 cgcgcgcggt ggcggccagg tcggccggtc cgaccgcggc gagccgcgtg cgataggtgc
     2161 gcaggtagtc ggcc
//
LOCUS       DASSYW010001177         4845 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_640160, whole genome shotgun sequence.
ACCESSION   DASSYW010001177 DASSYW010000000
VERSION     DASSYW010001177.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4845)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4845)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4845
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_640160"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1039)
                     /gene="argH"
                     /locus_tag="VFN38_18540"
     CDS             complement(<1..1039)
                     /gene="argH"
                     /locus_tag="VFN38_18540"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004056 - argininosuccinate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HET9013833.1"
                     /translation="MPTTIDAPVTATRSHKLWGGRFGAGPTPEFDALNNSIGVDFRLW
                     PYDIRLSKAWAVALWGANVLTLEESRALERGLDAVGARIAGGEQPLPSDEDVHTMIDR
                     LLHDAVGDVASKLHTGRSRNDQVATATRLWTMELCQRLDHHVRVLQGVLLEQAESLQT
                     ALMPSYTHLQRAIPVSGAHWLLSHFWPLERDRARLRAAARSAAVLPLGSGAVAGCAYP
                     ISRVLLQGTLGFDAISPNSIDAVSDRDFIAEVLFTSTMIGTHLSRLAEDLIIYGSSEF
                     GLVQFGEGYTSGSSMMPQKRNPDALELARGSAARMLGNLTALVATLKGLPTSYNKDLQ
                     DDKRYLFDATDT"
     gene            complement(1063..2340)
                     /locus_tag="VFN38_18545"
     CDS             complement(1063..2340)
                     /locus_tag="VFN38_18545"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: protein motif:HMM:NF001770.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004055 - argininosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HET9013834.1"
                     /translation="MTRTIVLAYSGGLDTSIIVPWLREHYDARVICVAADIGQGADEL
                     RGVREKALASGAEECYIEDLREEFVRDFIFPTLRAGAVYNRKYLLGTAMARPLIAKRQ
                     VEVAHRVGADALAHGCTGKGNDQVRFEMTFATLAPELPVIAPWREWDIRSREDAIDYA
                     TAKGIPIAATKEKIYSRDANLWHLSHEGGNLEDPNSAPKEDMFMLTTDPAQAPDVAED
                     VVIGFEKGTPVSVNGKALSPFALVSALNAIGGKHGVGRIDLVEDRMVGMKSRGVYETP
                     GGTLLYAAHSELEQLVLDRKTLAAKDLIAPRYADLVYEGRWWTTEREAYDAFVNVTQE
                     RITGTVTLRLFKGGMQVVGRQSDHALYDERFVTFGEDDVYQQSDAAGFIRLFALPARV
                     RAIKDQELAAAQAAAAPVEGEPAKSPADELAGV"
     gene            complement(2441..2902)
                     /locus_tag="VFN38_18550"
     CDS             complement(2441..2902)
                     /locus_tag="VFN38_18550"
                     /inference="COORDINATES: protein motif:HMM:NF014864.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013835.1"
                     /translation="MTKKHARQAAILDLVGSHVVGSQEELRQLLLGRDMDVTQATLSR
                     DLRDLGLARVPTEDGGRYVLPESFGSDEDKPLLGNLLPQLFSKVDGVGELIVLHTVRS
                     GAQPIAEAIDQEDFEEVLGTIAGDDTILIVTRSAAARVALTARLLELAGES"
     gene            3011..3982
                     /gene="argC"
                     /locus_tag="VFN38_18555"
     CDS             3011..3982
                     /gene="argC"
                     /locus_tag="VFN38_18555"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: protein motif:HMM:TIGR01850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003942 -
                     N-acetyl-gamma-glutamyl-phosphate reductase activity
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HET9013836.1"
                     /translation="MGVLGASGYAGREICALVARHPRFSLAFATANEQRGQRVRVGGR
                     EITFAAPDDVNLADAAVVFSALPHGASLPWVDRAAAAGARVVDLSSDLRPGHGGMPSD
                     GRAAVPYGMPELDAATRAAIRGAGLVANPGCYPTSILLALAPLQAAGLIAPRAAIIAN
                     SASGVSGAGNSPKRELLFAEVADDFRAYGVGNTHRHLHEMRATLAALGTDADLVFTPH
                     LLPVARGILSTITVPLAEPLADPAGFFRRAYGGESFIEVADGQPALRDVVQRNVVRIG
                     ATMIDGMRQPTLLVTSAIDNLMKGAAGQAVQNANLMCGIDECAGLPA"
     gene            3979..4755
                     /gene="argB"
                     /locus_tag="VFN38_18560"
     CDS             3979..4755
                     /gene="argB"
                     /locus_tag="VFN38_18560"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: protein motif:HMM:NF012899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003991 - acetylglutamate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HET9013837.1"
                     /translation="MTTRLRVIKVGGRPQLDAALPAALAAAHRASPGSLVVVHGGGDE
                     VSTLQRLFGVVARFSGGRRVTSALDLDIIRMALSGSANKRLVAALNDAAVPALGLSGE
                     DAGLLLATPTDREHFGFVGRPSAVNVALLEHLFGAGYLPVLSPVSRSDDPRAGATLNV
                     NGDDAASAIAVALTAEELLLVSDVEGVRVKGTPVARLDAEEAQGLVADGTAAGGMAAK
                     LQAGLAALEGGVARVRISDIAAIGQPDRGTILTRAGSKCA"
BASE COUNT          684 a         1642 c         1773 g          746 t
ORIGIN      
        1 gggtgtcggt ggcgtcgaag agatagcgct tgtcgtcctg cagatccttg ttgtagctcg
       61 tcggcagtcc cttcagcgtc gccacgaggg cggtgaggtt gccgagcatc cgcgcggcgg
      121 agccgcgtgc cagctccagc gcgtccgggt tccgcttctg cggcatcatg ctcgagccgc
      181 tcgtgtatcc ctctccgaac tgcactaacc cgaactcgct ggagccgtag atgatcagat
      241 cctcggcgag gcgcgacagg tgcgtgccga tcatcgtcga cgtgaacagc acctcggcga
      301 tgaagtcgcg gtcgctcacg gcgtcgatcg agttggggct gatcgcgtcg aagccgagcg
      361 tcccctggag caggacgcgc gagatgggat aggcgcagcc tgccacggcg ccggagccga
      421 gtggcaggac ggcggcggac cgcgcggcgg cccgcagccg ggcgcggtcg cgctcgaggg
      481 gccagaagtg cgagaggagc cagtgcgccc ccgacaccgg gatggcgcgc tggaggtggg
      541 tgtacgacgg catgagcgcc gtctgcagcg actccgcctg ctcgagcagc acgccctgca
      601 gcacgcgcac gtggtggtcg agccgctgac agagctccat cgtccacagg cgggtggcgg
      661 tcgcgacctg gtcgttgcgg ctgcggcccg tgtggagctt gctcgcgacg tcacccaccg
      721 cgtcgtgcag caggcggtcg atcatggtgt ggacatcctc gtcggacggg agcggctgct
      781 cgccgccggc gatgcgcgcg ccgaccgcat cgagcccgcg ctcgagcgcg cggctctcct
      841 cgagggtgag cacgttggcg ccccacagcg cgaccgccca cgccttggag aggcggatgt
      901 cgtacggcca cagccggaag tcgacgccga tggagttgtt gagcgcgtcg aactccggcg
      961 tggggccggc gccgaagcgc ccgccccaca gcttgtgcga cctggtcgcc gtgacgggcg
     1021 cgtcgatcgt cgtgggcatc gtcgggtcct ccgcgggcgg ggtcagacgc ccgcgagctc
     1081 gtcggccggc gacttcgccg gctcgccctc gaccggcgcc gccgcggcct gcgccgcggc
     1141 gagctcctgg tccttgatgg cgcgcacccg cgccggcagg gcgaacaggc ggatgaagcc
     1201 cgccgcatcg ctctgctggt agacgtcgtc ctcgccgaag gtgacgaagc gctcgtcgta
     1261 cagcgcgtgg tcgctctggc ggccgacgac ctgcatgccg cccttgaaca ggcgcagcgt
     1321 caccgtgccg gtgatgcgct cctgggtcac gttcacgaag gcgtcgtacg cctcacgctc
     1381 ggtggtccac cagcgcccct cgtacacgag atcggcgtag cggggcgcga tgaggtcctt
     1441 cgccgccagg gtcttgcgat cgagcacgag ctgctcgagc tcggagtgtg ccgcgtacag
     1501 cagggtgccg cccggggtct cgtacacgcc gcgcgacttc atccccacca tgcgatcctc
     1561 cacgaggtcg atgcggccga caccgtgctt tccgccgatg gcgttgagcg cggagacgag
     1621 cgcgaagggg gagagcgcct tgccgttcac cgacacgggc gtgcccttct cgaagccgat
     1681 cacgacgtcc tccgccacgt ccggggcctg agccggatcg gtggtgagca tgaacatgtc
     1741 ttccttcggc gccgagttcg gatcctcgag attgcccccc tcatgactga ggtgccagag
     1801 gttggcgtcg cgcgaataga tcttctcctt cgtggcggcg atggggatcc ccttcgccgt
     1861 cgcgtagtcg atcgcgtcct cgcggctgcg aatgtcccac tcgcgccacg gggcgatcac
     1921 cggaagctcg ggggcgaggg tcgcgaaggt catctcgaag cggacctggt cgttcccctt
     1981 gccggtgcag ccgtgggcga gggcgtcggc gccgacgcgg tgggccacct cgacctgacg
     2041 cttggcgatg agcggccgcg ccatggcggt gccgaggagg tacttgcggt tgtagaccgc
     2101 gccggcgcgc agggtcggga agatgaagtc gcggacgaac tcctcgcgga ggtcctcgat
     2161 gtagcactcc tccgccccgg aggccaacgc cttctcgcgc acgccgcgca gctcgtcggc
     2221 gccctgaccg atgtcggccg ccacgcagat gacccgtgcg tcatagtgct cgcgcagcca
     2281 gggcacgatg atcgaggtgt cgagtccgcc ggaataggcg aggacgatgg tgcgggtcat
     2341 gggcgctcct cagtaaagat tatgcagatg taatgcatat ttactcagtc ataccggcta
     2401 cgtcaagaga tccggcacca tcccgatatg gtggtgtcgg tcagctctct ccggcgagct
     2461 cgagcaggcg ggcggtgagg gcgacgcggg cggcggcgga gcgggtgacg atgaggatcg
     2521 tatcgtcgcc ggcgatggta cccaacacct cctcgaagtc ctcctggtcg atcgcctcgg
     2581 cgatcggctg ggcaccactg cgcaccgtat ggaggacgat gagctcgccg accccgtcga
     2641 cctttgagaa gagctggggc aaaaggttgc cgagcaacgg tttgtcctca tcgctgccga
     2701 atgattccgg caggacgtag cgccctccgt cctccgtcgg cacccgcgcc aacccgaggt
     2761 cccggaggtc gcgtgacagt gtcgcctggg tgacatccat gtcgcggccg agcaggagct
     2821 ggcggagctc ttcctgactc cccaccacat gactgccgac cagatccagg atggccgcct
     2881 ggcgcgcgtg cttcttggtc attggtcctc ccaggggttg gcccggcgcg cctcggtgag
     2941 cgttcggcga aagcgactat tgaccggggg gtactgcatg attatgcatt ataacgtgaa
     3001 tacgatcccc gtgggagtcc tgggggccag cggatacgcc ggccgtgaga tctgcgccct
     3061 ggtggcgcgg catccgcgct tctcgctcgc cttcgcgacg gccaacgagc agcgcggcca
     3121 gcgcgtccgc gtgggcggcc gggagatcac cttcgcggct ccggacgacg tcaacctggc
     3181 ggacgcggcg gtggtgttca gcgccctgcc tcacggcgca tcgctgccct gggtggaccg
     3241 ggctgccgct gccggcgcgc gcgtcgtcga cctgtccagc gacctccgcc ccggacatgg
     3301 cgggatgccg tccgacggca gggcggccgt tccttatggc atgcccgagc tggacgccgc
     3361 gacgcgcgcc gccatccgtg gcgcgggcct cgtggcgaac cccggctgct atcccacctc
     3421 catcctcctc gccctcgcgc cgctccaggc ggcgggcctc atcgcgcccc gcgcggcgat
     3481 catcgccaac tccgccagcg gcgtgagcgg cgccggcaac tcgcccaagc gcgagctgct
     3541 gttcgccgag gtggccgacg acttccgcgc ctacggcgtg ggcaacacgc atcgccacct
     3601 ccatgagatg cgggcgacgc tggccgcgct gggcaccgac gcggacctcg tgttcacgcc
     3661 gcatctgctc cccgtggcgc gcggcatcct gtccacgatc accgtgcccc tcgccgagcc
     3721 gctcgccgat cccgcggggt tcttccgccg ggcgtacggc ggcgagtcgt tcatcgaggt
     3781 cgccgacggc cagccagcgc tgcgcgacgt cgtacagcgg aacgtcgtgc gcatcggcgc
     3841 caccatgatc gacgggatgc ggcagccgac gctgctcgtg acgtcggcga tcgacaacct
     3901 catgaagggt gcggcgggcc aggcggtgca gaacgcgaac ctgatgtgcg gcatcgacga
     3961 gtgcgcaggg ctgccggcgt gacgacgcgc ctgcgcgtga tcaaggtggg ggggcgcccg
     4021 cagctcgacg ccgcgcttcc ggcggcgctc gcggcggcgc atcgcgcctc gcccggctcg
     4081 ctggtggtgg tgcacggcgg cggcgacgag gtgagcaccc tccagcggct gttcggcgtc
     4141 gtcgcgcggt tcagcggcgg ccgccgcgtc accagcgcgc tggacctgga catcatccgc
     4201 atggcgctgt ccgggtcggc gaacaagcga ctggtcgcgg cgctcaacga cgccgccgtg
     4261 ccggcgctgg gactgtcggg cgaggatgcg gggctgctgt tggccacgcc gacggaccgc
     4321 gagcacttcg gtttcgtggg gcggccgtcc gccgtgaacg tcgcgctgct cgagcacctc
     4381 ttcggtgccg gctacctgcc ggtgctctcg ccggtgagcc gaagcgacga cccgcgcgcg
     4441 ggggcgacgt tgaacgtgaa cggagacgac gcggcgtcgg cgatcgccgt ggcgctgaca
     4501 gcggaagagc tgctgctggt gtcggacgtg gaaggggtgc gggtgaaggg cacgccggtg
     4561 gcgcgcctgg atgccgagga ggcgcagggg ctcgtggcgg acggcacggc cgcgggcggg
     4621 atggcggcga agctccaggc ggggctcgcc gcgctggagg gtggagtggc gcgggtgcgg
     4681 atctctgaca ttgccgcgat cggacagccc gatcgcggga cgatactgac gcgagcgggg
     4741 agtaagtgcg catgacggca tcgacgatga agcccaccac ggacgagcac gaggcgcagc
     4801 ccggcagcgc ggggcagccc gtgacggtcg agagcccgat cctcg
//
LOCUS       DASSYW010001178         2443 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1708801, whole genome shotgun sequence.
ACCESSION   DASSYW010001178 DASSYW010000000
VERSION     DASSYW010001178.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2443)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2443)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2443
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1708801"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..523)
                     /locus_tag="VFN38_18565"
     CDS             complement(<1..523)
                     /locus_tag="VFN38_18565"
                     /inference="COORDINATES: protein motif:HMM:NF013125.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lamin tail domain-containing protein"
                     /protein_id="HET9013838.1"
                     /translation="MILKHRPLLLGALAAVIAAACADRTTAPVVLVPGTPVRALASAA
                     PSVAINEFLADPSAVTDDRGEWLELYNFGSTAVSLQGWTLRSANDAAHTITTALSIPA
                     GGRVVLGRDGSKSRNGGVTMSYVYGAAITLANASDWIAVGDASGTTVDSVAWTSTTAG
                     RAWGVRNAGADNTV"
     gene            714..2339
                     /locus_tag="VFN38_18570"
     CDS             714..2339
                     /locus_tag="VFN38_18570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="family 10 glycosylhydrolase"
                     /protein_id="HET9013839.1"
                     /translation="MLPLRRLALLVALAALALPSASACGQAPPVMARTAVDSAPPAVP
                     REFRAAWVASVSNIDWPSKPGLTTAQQQAELLAILDKLVELRMNAIVLQVRPAADALY
                     QSSIEPWSDFLTGEMGRAPDPYYDPLTFATAEAHKRGLEMHVWINPYRAKHPATKSVS
                     ANHISRSHPELVRKYGPFLWMDPGDPAVRARTTEVVLDLVRRYDIDGVHMDDYFYPYP
                     ETQRGREIEFPDASTYLRYRQRGGRLARDDWRRENVDLLVKELYEGIHAVKPWVRFGV
                     SPFGIWRPGYPASVRGFDQYAKLYADARKWFNEGWVDYFTPQLYWAVDRPEQRYPVLL
                     EWWAEQNLKGRHLWPGNYTGKVAFTGASAWRTDEVLEQIRLTRAQPAATGNVHFSMKV
                     FLDNPDSLNERLKTESYTAQALVPASPWLGRGAPAQPEIALRSDSASGYWVLDLKPGT
                     NGAGTTNGADGNGDDGNGGASHPTDLDGARAVQLWVVQTRTDAGWTTQVVPGTERLHV
                     VGPRFGAAPLDVRVTAVDRVGNAGPAARAVPAR"
BASE COUNT          350 a          877 c          873 g          343 t
ORIGIN      
        1 ccacggtgtt gtcggcgccg gcgtttcgca ctccccacgc gcggccggcc gtggtcgagg
       61 tccatgcgac ggaatccacc gtcgtaccgc tggcgtcgcc gacggcgatc cagtccgagg
      121 cgttggccag ggtgatcgcc gccccgtaca cgtagctcat cgtcacgccg ccgttgcggg
      181 acttcgagcc gtcgcggccg agcacgacgc gccctcctgc gggaatgctg agcgcggtcg
      241 tgatggtgtg ggccgcgtcg ttcgcggagc ggagcgtcca gccctgaaga ctcaccgcgg
      301 tgctgccgaa gttatagagc tcgagccatt cgccgcggtc gtcggtgacc gcggaggggt
      361 cggccaggaa ctcgttgatc gcgacggagg gcgccgccga ggccagcgcg cggaccgggg
      421 tgccgggcac gagcacgacg ggcgcggtcg tgcggtcggc acaggcggct gcgatcaccg
      481 cggccagggc acccaacagc agcgggcggt gtttcaggat catcgactct ctcgacatgg
      541 ggtgggccag cgagaacggt ggcagtgcgg gttcggcacc gcctgttcgg agcgcggcca
      601 atatctccgc gggtccgccg gccggtaaga gcggcgcggc ccgcgaccgc ccgcgccact
      661 tgcccgcagg tcgtacgcag cgcaactatc gaattccctc tcgccatcag gtcatgctcc
      721 cgcttcgccg cctcgcgctt ctcgtcgccc tcgccgccct cgcgcttccg tccgcgtccg
      781 cgtgcgggca ggccccgccg gtgatggcgc gcaccgccgt ggacagcgca ccgccggccg
      841 tcccgcgcga gttccgcgcg gcgtgggtgg cctcggtgag caacatcgac tggccgtcga
      901 agcccgggct caccaccgcc cagcagcagg cggagctcct cgcgatcctc gacaagctcg
      961 tcgagctgcg catgaacgcg atcgtgctcc aggtgcgtcc cgccgccgac gcgctgtacc
     1021 agtcgtcgat cgagccgtgg tcggacttcc tcacgggcga gatggggcgc gcgccggatc
     1081 cgtactacga tccgctcacc ttcgcgacgg cggaggccca caagcgtggc ctggagatgc
     1141 acgtctggat caacccgtac cgcgccaagc atcccgccac gaagtcggtc tcggcgaacc
     1201 acatcagccg cagccatccc gagctggtgc ggaagtacgg ccccttcctc tggatggatc
     1261 cgggcgatcc cgccgtgcgc gcccgcacca cggaggtcgt gctcgatctc gtgcgccgct
     1321 acgacatcga cggcgtgcac atggacgact acttctaccc ctatcccgag acgcagcggg
     1381 gacgcgagat cgagttcccc gacgcctcca cctatctgcg ctatcggcag cgcggcgggc
     1441 ggctggcccg cgacgactgg cggcgcgaga acgtcgacct gctggtgaag gagctctacg
     1501 agggcatcca tgccgtgaag ccctgggtgc gcttcggcgt cagcccgttc ggcatctggc
     1561 gcccgggcta tcccgcgtcg gtgcgcggtt tcgaccagta cgccaagctg tacgccgacg
     1621 cgcggaagtg gttcaatgaa gggtgggtgg actacttcac cccgcagctg tactgggcgg
     1681 tggaccgtcc cgagcagcgc taccccgtgc tgctggagtg gtgggccgag cagaacctga
     1741 agggccgcca cctctggccc ggcaactaca ccggcaaggt cgccttcacc ggcgcctccg
     1801 cctggcgcac cgacgaggtg ctggagcaga tccgcctgac gcgcgcgcag ccggcggcca
     1861 ccgggaacgt gcacttcagc atgaaggtgt tcctggacaa tcccgacagc ctgaacgagc
     1921 ggctgaagac ggaatcgtac accgctcagg cgctcgtgcc ggcctcgccc tggctcggcc
     1981 gcggcgcgcc cgcgcagccg gagatcgcgc tgcgcagcga cagcgcctcg ggctactggg
     2041 tgctcgatct gaagccgggc acgaacggcg ccggcacgac gaacggcgcc gacgggaacg
     2101 gcgacgacgg aaacggcggc gcctcgcatc cgacggacct ggacggagcg cgcgcggtgc
     2161 agctctgggt ggtgcagacg cgcaccgacg cgggctggac gacgcaggtg gtgccgggca
     2221 cggagcggct ccacgtggtc gggccgcgct tcggcgccgc gccgctcgac gtgcgggtga
     2281 cggcggtgga ccgggtgggg aacgccggtc ccgcggcgcg ggcggtgccg gcgcgctgac
     2341 gcggcgttcg ggccttcagg gcccggagcc gccggccagc ctcaccgccg cgtctcgaag
     2401 aacatcggcg ccggcttcgc gtctgcgccg agctcgcgca cca
//
LOCUS       DASSYW010001179         3420 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_216433, whole genome shotgun sequence.
ACCESSION   DASSYW010001179 DASSYW010000000
VERSION     DASSYW010001179.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3420)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3420)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3420
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_216433"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..631
                     /locus_tag="VFN38_18575"
     CDS             <1..631
                     /locus_tag="VFN38_18575"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HET9013840.1"
                     /translation="PDVRDRIFEPFFTTKSEDRGTGLGLSVTADIVRQAGGGISVETA
                     LARGTSFEIFLPTTSSVRPVAPAPIAAARQPVASAHRPGVRVLVVEDDDALRHLLARV
                     LRQADMTVTEARHGEEALGLVRRTMEGRPDAPFDVLVSNVIMPRLGGGRLADALVAMM
                     PGLRVVLLSGHPERLATSAYDRPWEILHKPFAPSALIELLDRPSVATHQ"
     gene            672..2255
                     /locus_tag="VFN38_18580"
     CDS             672..2255
                     /locus_tag="VFN38_18580"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing sensor histidine kinase"
                     /protein_id="HET9013841.1"
                     /translation="MIGYPSEAGTVHLAEEGMLHVHAILAHMGEAFLAVDRQLHVLSA
                     SEAAAGWAGVAPAAMLGRHVLELFPDAGDLPFIPALQAALEERREVEVEAYYPRLHTW
                     FAMRAFPVVEGAAVFATDVTERHRVEEWMQRSERALASLVEHSPDYIARFDASLRYLY
                     VSPSITRVMHRPSGEFLGRRMPELDIPAEVCAQWEAQIRGVFETGDAAEFTSMYVRPD
                     GQQRYYQARLVPEHDEAGRVRTVLGFTRDFTELREATEQLRAAGAELERRVAERTREL
                     AESNAQLAEATRHKSEFLASVSHGLRTPLNAVIGFTELLHEEKVGALTSAQRELLAEV
                     LDGAQELRAQIDELLDTARAESGRLQLEWTTVSPARVVRDVRDTLRALAAERQLRMHL
                     DVKRAPRVVRTDARLLRQAVLDLASNALKFTPAGGTVTLRTIADSRQSFRVEVEDTGV
                     GIATQDQARLFQAFTQIGPPHDDAARRGSGLGLALTRTVAEALGGSVGVRSAPGRGSC
                     FFLDLPRAPSPDVNLRDRG"
     gene            2367..3152
                     /locus_tag="VFN38_18585"
     CDS             2367..3152
                     /locus_tag="VFN38_18585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013842.1"
                     /translation="MRPFRVIFLVAALSTLACRQPPELAAVPQDGLAVLARMHARYAD
                     SWYRTLTFTQRTVQHRPDGTERVSTWYEALNGDRLRIDMGDPAEHNGALYTADSLYVV
                     RAGKVVRAVADGNPFLPLISGVYLQPLDVTVRQLAPYKVNLNLVHAQEWEGRRTFVIG
                     AASPADTTSPQVWVDAQRLIVMRFIMPLFPSPDGRSQDVRLEHNVEVGGGWLATTIRM
                     LDKGVPVQTEEYSDWRTGMSLPASFFRAETWTQDPHWFRPRTP"
BASE COUNT          482 a         1170 c         1268 g          500 t
ORIGIN      
        1 ccccgacgtg cgcgaccgca tcttcgaacc cttcttcacg acgaagagcg aggatcgcgg
       61 cacggggctc gggctctcgg tgacggcgga catcgttcgg caggcggggg gcggcatcag
      121 cgtggagacg gcgctcgcgc ggggcacgag cttcgagatc ttcctgccga cgacgtcgtc
      181 ggttcgtccg gtcgcgcccg ctcccatcgc ggcggcccgg cagcccgtcg cctcggcgca
      241 tcggccgggc gttcgcgtcc tcgtggtgga ggacgacgat gcactgcggc atctgctcgc
      301 acgcgtgctg cggcaggccg acatgacggt gaccgaggcg cgtcacggcg aggaagcgct
      361 ggggctggtg cggcgcacga tggaggggcg cccggacgca ccgttcgacg tgctggtgag
      421 caacgtcatc atgccgcgac tgggcggcgg ccgcctcgcg gacgcgctcg tcgcgatgat
      481 gccggggctg cgcgtggtgc tgctgtccgg ccatccggag cgcctggcga cgagcgcgta
      541 cgatcgcccg tgggagatcc tgcacaagcc gttcgccccc tcggcgctca tcgagctgct
      601 cgatcgcccg tcggtcgcga cgcaccagta gcggtgcgtc ggccgccctt gtgtcacccc
      661 gcccgacgga tatgatcggg tatccgagcg aggcgggcac ggtgcacctg gcggaggagg
      721 ggatgctgca cgtccatgcg atcctcgccc acatgggcga ggcgtttctc gcggtggacc
      781 ggcagctgca cgtcctgtcc gccagcgagg cggcggcggg gtgggccggt gtcgcgccgg
      841 cggcgatgct cggacgccac gtcctcgagc tctttcccga cgcaggcgat ctgccgttca
      901 tccccgccct gcaagcggcg ctggaggagc gtcgcgaggt ggaggtcgag gcgtactatc
      961 ctcgactgca cacgtggttc gcgatgcgcg cctttccggt cgtcgagggc gcggcggtgt
     1021 tcgcgaccga cgtcaccgaa cggcaccgcg tcgaggagtg gatgcaacgg agcgaacgcg
     1081 cgctggcgag cctcgtcgag cactcgcccg actacatcgc ccgcttcgac gcatcgctgc
     1141 gctacctgta cgtgagcccg tccatcaccc gcgtcatgca ccggccgtcc ggcgagttcc
     1201 tcgggcggcg catgccggag ctcgacatcc cggccgaggt ctgcgcgcag tgggaagcgc
     1261 agatccgtgg ggtcttcgag accggcgacg ccgccgagtt cacgagcatg tacgttcggc
     1321 ccgacggtca gcagcgctac tatcaggcgc ggctcgtgcc ggagcacgac gaggcggggc
     1381 gcgtgcgcac cgtgctcggt ttcacgcgag acttcacgga gctgcgggag gcgacggagc
     1441 agctgcgcgc ggccggggcg gagctcgaac ggcgcgtcgc ggagcgcacg cgcgagctgg
     1501 ccgagagcaa tgcgcagctc gccgaggcga cgcggcacaa gagcgagttc ctggcgagcg
     1561 tctcccacgg cctgcgcacg ccgctcaacg cggtgatcgg cttcaccgag ctgctgcacg
     1621 aggagaaggt cggcgcgctg acgtcggcgc agcgggaact gctcgccgaa gtgctcgacg
     1681 gtgcccagga gctacgcgcc cagatcgacg agctgctgga caccgcacgg gccgagtcgg
     1741 gccggttgca gctggagtgg acgaccgtgt cgccggcgcg cgtcgtgcgc gacgtgcgcg
     1801 ataccctgcg cgcgctggcc gccgagcggc agctccgcat gcacctcgac gtgaagcgcg
     1861 cgccgcgcgt ggtgcgcacc gatgccaggc tgctgcggca ggcggtgctg gacctcgcgt
     1921 ccaacgcgct gaagttcacg ccggccgggg gcacggtgac gctgcgcacg atcgccgaca
     1981 gccggcagtc gttccgcgtc gaggtcgagg acaccggcgt gggcatcgcg acccaggatc
     2041 aggctcgact cttccaggcg ttcacgcaga tcggtccgcc gcacgacgac gcggcgcgac
     2101 gcggctccgg gctgggcctt gcgctgacgc gcacggtcgc ggaggcgctg gggggcagcg
     2161 tcggcgtgcg gagcgctccg ggtcgaggca gctgcttctt cctcgacctg ccgcgcgctc
     2221 cgtcgcccga cgtgaacctt cgcgaccgag gctgacgcgc gacgccggcg cgcgcacgga
     2281 gatcccggac catcgcgtgc gcggcgccgg ccctggtggc attatgtagc gttcctcatg
     2341 gtatcgcgtc cctccacctg gccaccatgc gtccgttccg cgtcatcttc ctcgtcgccg
     2401 cactgtcgac gctcgcctgc cgccagccgc ccgagctcgc cgccgtgccg caagacggtc
     2461 tcgccgtgct ggcacgcatg cacgcgcggt acgccgactc gtggtaccgc acgctgacgt
     2521 tcacgcagcg caccgtgcag caccggccgg acggcacgga gcgggtgagc acctggtacg
     2581 aagcgctgaa cggggaccgg ctgcggatcg acatgggcga tccggcggag cacaacggtg
     2641 cgctgtacac ggcggactcg ctctacgtgg ttcgcgccgg caaggtcgtg cgggccgtgg
     2701 cggacgggaa cccgttcctg ccgctgatct cgggggtcta tctccagccg ctcgacgtga
     2761 cggtgcggca gctcgcgccg tacaaggtga acctgaacct ggtccacgcg caggagtggg
     2821 aagggcgccg caccttcgtc atcggcgcgg cgtcgccggc ggacacgacg tcgccgcagg
     2881 tctgggtgga cgcgcagcgg ctcatcgtga tgcgcttcat catgccgctg ttcccgtcgc
     2941 ccgacggtcg aagccaggac gtgcggctcg agcacaacgt ggaggtgggc ggcggctggc
     3001 tggcgacgac gatccgcatg ctcgacaagg gcgtgccggt ccagaccgag gaatactcgg
     3061 actggcgcac gggcatgtcg ctgccggcgt cgttcttccg ggcggagaca tggacgcagg
     3121 atccgcactg gtttcggccg cgcacgccgt gacctcgacg ctagcggcgc gtttgcgatg
     3181 aaatgatgac gtatcgccgt cgcggccgtc ctagcctcct cgcgaggcct gcgagagcgg
     3241 tgtcaccgcg gaggacgcag agggacgcag aggacagcac cggcgatgga cttgtccgag
     3301 atcgacgtgc gaagcgggca ggtggtggac gccgccatgc gagttcactc cgcgctcgga
     3361 ccgggagtgc tcgaaagtgc atactcggcg tgcctgacgc acgagcttcg cacgcgaggg
//
LOCUS       DASSYW010001180         2077 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1192736, whole genome shotgun sequence.
ACCESSION   DASSYW010001180 DASSYW010000000
VERSION     DASSYW010001180.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2077)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2077)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2077
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1192736"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(46..1107)
                     /gene="nuoH"
                     /locus_tag="VFN38_18590"
     CDS             complement(46..1107)
                     /gene="nuoH"
                     /locus_tag="VFN38_18590"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017979176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoH"
                     /protein_id="HET9013843.1"
                     /translation="MDAMLAPVRDLLGPAWLPIWTLVKILVLVTPLIIGVAYLTFWER
                     KVIGWMQVRIGPNRVGPWGLLQPFADVFKLMFKEIIVPTGANRYLFFIAPMLAIGPAV
                     AAWAVVPLTDTLVVADINAGLLYIIAMTSTGVYGIILAGWASNSKYAFLGALRSAAQI
                     VSYELAMGFALVAVLMCANSLNLRAIVAGQEGGAAYWYVWPLLPMFVVYLVSGIAETN
                     RHPFDLAEGESEIVAGFHVEYSGVAFAVFFLAEYMNMILIAVLASILFLGGWLSPLPI
                     LNEFTVGGVAPFGDGLFWLGAKMAFVLLIFLWVRATFPRYRYDQVMRLGWKVFIPLTL
                     VWIVFVGTMLQPRYAPLFH"
     gene            complement(1123..>2077)
                     /locus_tag="VFN38_18595"
     CDS             complement(1123..>2077)
                     /locus_tag="VFN38_18595"
                     /inference="COORDINATES: protein motif:HMM:NF012602.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HET9013844.1"
                     /translation="AEAIAASLLGGTRRAIFLGNAAVQHADAAQLRALAQALAGILDA
                     TLGTLVESANAIGAALAEAEPGPGGLDARAMLAEPRRAYLVLHAEPEFDCAHPVAARA
                     ALEKADLCVVMSPFVHGTHYADVLLPIAPFTETAGTFVNCEGRMQAFNGVVRPLGETR
                     PGWKVLRVLGTMLGLPGFEFESIDDVRAALVPDAASIAGRLSNATSTPIATPAAQPAP
                     LERVADIPIYFADPLVRRAESLQRTADAKPPRARMHRTLLDKLGIADGAQVRVRQGRG
                     EAVVAAVADAGVPPGVVRLAAAHPSTCGLDGLSGPVSVERA"
BASE COUNT          351 a          735 c          740 g          251 t
ORIGIN      
        1 agcagccagg tcttcaggaa ttcgcgcagg cgctggacca tggcgtcagt ggaacagcgg
       61 cgcgtagcgc ggctgcagca tcgtgccgac gaagacgatc cacaccagcg tcagcgggat
      121 gaacaccttc cacccgaggc gcatcacctg atcgtagcgg tagcgcggga aggtcgcccg
      181 cacccacagg aagatcagca gcacgaacgc catcttggcg ccgagccaga acaggccgtc
      241 gccgaacggc gcgacgccgc cgaccgtgaa ctcgttgagg atcgggagcg gcgagagcca
      301 gccgccgagg aacaggatcg acgcgagcac cgcgatcagg atcatgttca tgtactcggc
      361 gaggaagaac accgcgaacg cgacgccgga gtactcgacg tggaacccgg ccacgatctc
      421 gctctcgccc tcggcgaggt cgaacggatg gcggttggtc tcggcgatgc ccgacaccag
      481 gtagacgacg aacatcggca ggagcggcca cacgtaccag tacgccgcgc caccctcctg
      541 ccccgcgacg atcgcgcgga ggttgaggct gttggcgcac atcagcaccg cgaccagcgc
      601 gaagcccatc gcgagctcgt agctcacgat ctgcgccgcc gagcgcagcg cgccgaggaa
      661 cgcgtacttg gagttcgacg cccagcccgc gaggatgatc ccgtacaccc cggtcgacgt
      721 catcgcgatg atgtacagga ggccggcatt gatgtcggcg accaccagcg tgtcggtgag
      781 cggcaccacg gcccatgccg ccaccgccgg gccgatcgcc agcatcggcg cgatgaagaa
      841 gagataccgg ttcgccccgg tcgggacgat gatctccttg aacatcagct tgaacacgtc
      901 ggcgaacggc tgcagcagcc cccacggccc cacccggttc gggccgatcc gcacctgcat
      961 ccagccgatg accttgcgtt cccagaacgt caggtacgcg acgccgatga tcagcggcgt
     1021 gaccagcacc aggatcttga cgagcgtcca gatcgggagc cacgcgggcc cgaggaggtc
     1081 gcgcaccggg gcgagcatcg catccatggc gtcgttgtcc cctcaggcgc gctcgacgct
     1141 gaccgggccg gacaggccgt cgaggccgca ggtcgacgga tgcgccgccg caaggcgcac
     1201 gacgcccggc ggaaccccgg catcggccac cgccgcgacc acggcctcgc cgcggccctg
     1261 gcggacgcgc acctgcgcgc cgtcggcgat gccgagcttg tcgagcagcg tgcggtgcat
     1321 gcgcgcgcgc ggcggcttcg cgtcggccgt gcgctggagc gactcggcgc gccgcaccag
     1381 cgggtcggcg aagtagatcg gaatgtcggc gacgcgctcg agcggagccg gctgggccgc
     1441 gggcgtggcg atcggcgtcg acgtcgcgtt ggacaggcgg ccggcgatcg acgcggcgtc
     1501 cggcacgagc gccgcgcgaa cgtcgtcgat cgactcgaac tcgaagccgg gcagaccgag
     1561 catcgtgccg agcacgcgca gcaccttcca gccggggcgc gtctcgccga gcggcctcac
     1621 gacgccgttg aacgcctgca tgcggccttc gcagttgacg aacgtcccgg cggtctcggt
     1681 gaacggggcg atcggcagca ggacgtcggc gtagtgcgtc ccgtgcacga acgggctcat
     1741 cacgacgcag aggtccgcct tctccagcgc ggcccgcgcc gcgaccggat gcgcgcaatc
     1801 gaactcgggc tccgcgtgca gcacgaggta ggcgcgccgc ggctccgcga gcatcgcgcg
     1861 cgcgtcgagg ccgccgggcc cgggctcggc ttccgcgagc gcggcgccga tggcgttggc
     1921 ggactcgacc agcgtgccga gcgtcgcgtc gaggatgccg gcgagcgcct gcgccagcgc
     1981 gcggagctgc gccgcgtcgg cgtgctggac cgcggcgttg cccaggaaga tcgcacggcg
     2041 ggtaccgccg agcaggctcg cggcgatcgc ctcggcc
//
LOCUS       DASSYW010001181         2043 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_897996, whole genome shotgun sequence.
ACCESSION   DASSYW010001181 DASSYW010000000
VERSION     DASSYW010001181.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2043)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2043)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2043
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_897996"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            264..>2043
                     /locus_tag="VFN38_18600"
     CDS             264..>2043
                     /locus_tag="VFN38_18600"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HET9013845.1"
                     /translation="MSIPDQLGPARRAVHLFVRPNLRRVSLTFVLSLAVAVAAASEPL
                     LLKQVVDRLADAPGAAESTLHALVTGVALFAVVLTCRILGAAWVTTSTWAVRLNLEYQ
                     LRSRVAAKMSVLSARTQSEMGTGGLRYAIDSSSPQTASAFTDVAFKLVPTLVYVTLAA
                     WGMARLDGAITAIVLCLLPVPAIIAAAASRQQRRRERMQHAFWKRLWSGYTERLHGMG
                     TVRAFARERDEEKRLMRRIRWAFASIQRGVHVDARTTVAAGIAELTARVVVLCLGGWL
                     VVRGELTVGSLLAFLGYVSGVFAPVQQIVDLYPTLRKARVALDSVFQVLDAEEESPDV
                     PGAVACPPITGQIRFERVSFEYRNGYKALDEVDVTVEAGETVALVGPSGSGKSTLLQL
                     LQRVHNPTSGRILIDGLDLRTLSIATVRRQYGSVPQDVVLFNDSVAANISYGRPSATR
                     EEVMAAARAANAHGFIIDLAKGYDTRVGEGGRDLSGGQRQRIAIARAFLVDPAVLLLD
                     EATAALDSESEQAVQDALRSLRRGRTTFIVAHRLNTVRDANRILVIGEGRVIGSGAHE
                     ELLASCPTYATLVRHQLGEPGGTRTRP"
BASE COUNT          270 a          729 c          757 g          287 t
ORIGIN      
        1 gcacgacgaa ggtggccacg cgcgcgctgt cgagcgagca ggcgacggcg accttggggg
       61 cgtcggggag gtagccgacc tggttcacgc ggatgaaggt gccggtgtcg cccgccgcga
      121 gcagtccggc caggaagggg aggatcatgg gcgcatgcta cgccccccgc gggcgaccgg
      181 caatggaacc cggggcgcgc ggtgacgccc gccggccgcc ggccgtcagc aggaggtacg
      241 ctcctcccgc ccgccccgcc cccgtgtcca ttcccgatca gctcggcccc gcccggcgag
      301 ccgtgcacct gttcgtgcgc ccgaacctcc ggcgcgtgag cctcaccttc gtgctctccc
      361 tcgccgtcgc ggtggcggcg gcctccgagc cactcctgct caagcaggtg gtggaccggc
      421 tggccgatgc gcccggggcg gccgagtcca ccctgcacgc cctcgtcacc ggggtggcgc
      481 tgttcgccgt cgtcctcacc tgccgcatcc tgggcgcggc gtgggtgacg acgtccacct
      541 gggcggtgcg gctgaacctc gagtaccagc tccgctcgcg cgtggcggcg aagatgagcg
      601 tgctctcggc gcgcacgcaa tcggagatgg gaacgggggg actcaggtac gccatcgact
      661 cgagctcgcc gcagacggcg agcgccttca ccgacgtcgc gttcaagctc gtgccgacgc
      721 tggtgtacgt gacgctggcg gcgtggggga tggcgcggct cgacggcgcc atcacggcga
      781 tcgtgctctg cctgctgccg gtgccggcga tcatcgcggc cgcggcgtcg cgccagcagc
      841 gccgccgcga gcggatgcag cacgccttct ggaagcggct ctggtcgggc tacaccgagc
      901 ggctgcacgg catgggcacc gtgcgcgcgt tcgcgcgcga gcgcgacgag gagaagcgcc
      961 tgatgcgccg catccgctgg gcgttcgcca gcatccagcg tggcgtgcac gtggacgcgc
     1021 gcaccaccgt ggccgccggc atcgcggagc tcaccgcccg cgtggtggtg ctctgcctgg
     1081 gcggatggct cgtggtgcgc ggcgagctca ccgtgggctc gctcctcgcc ttcctcggct
     1141 acgtgagcgg cgtgttcgcg ccggtgcagc agatcgtcga cctgtacccc acgctccgga
     1201 aggcgcgcgt cgcgctcgac tcggtgttcc aggtgctcga cgcggaggaa gagtcgcccg
     1261 acgtgccggg cgccgtcgcg tgtcctccca tcaccgggca gatccggttc gagcgggtga
     1321 gcttcgagta ccggaacggc tacaaggcgc tcgacgaggt ggacgtcacg gtggaagcgg
     1381 gagagacggt ggcgctcgtg ggcccgtcgg ggagcggcaa gtccaccctc ctccagctgc
     1441 tccagcgcgt ccacaacccg acgagcgggc ggatcctgat cgacgggctc gacctgcgca
     1501 ccctgtccat cgcgacggtg cgccgccagt acggatcggt gccgcaggac gtcgtgctgt
     1561 tcaacgattc ggtggcggcg aacatctcgt acggccgccc gtcggcgacg cgcgaggagg
     1621 tgatggccgc ggcgcgcgcg gcgaacgcgc acggcttcat catcgacctc gcgaagggat
     1681 acgacacccg ggtgggcgag gggggccgcg acctgtcggg cggccagcgg cagcgcatcg
     1741 ccatcgcgcg cgccttcctc gtcgatcccg ccgtcctgct gctcgacgag gcgaccgccg
     1801 cactggattc cgagtcggag caggcggtgc aggacgcgct gcgctcgctg cgacgcggac
     1861 ggaccacctt catcgtggcg caccggctga acaccgtgcg cgacgcgaac cggatcctcg
     1921 tcatcggcga ggggcgcgtg ataggctccg gcgcgcacga ggagctgctg gccagctgtc
     1981 ccacgtacgc cacgctggta cgtcatcagc tcggcgagcc gggaggcacg cgcacgcgtc
     2041 ccg
//
LOCUS       DASSYW010001182         2379 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_879597, whole genome shotgun sequence.
ACCESSION   DASSYW010001182 DASSYW010000000
VERSION     DASSYW010001182.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2379)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2379)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2379
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_879597"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..486)
                     /locus_tag="VFN38_18605"
     CDS             complement(<1..486)
                     /locus_tag="VFN38_18605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013846.1"
                     /translation="MSVGERPEVPDHEKSPAAGRGNGRTAAGSARGKRGRPRRAAASS
                     LNDDLQEIDETGEVGGVTTLEGGNGGGDGGGGGRGGLERERAMRRFLAGLRAVDAGDF
                     SVRLEPLGDPLMAEIADIFNSVVTKQGRLADELNRVALSVGREGKMRDRATIGPAGGL
                     WA"
     gene            complement(711..1184)
                     /locus_tag="VFN38_18610"
     CDS             complement(711..1184)
                     /locus_tag="VFN38_18610"
                     /inference="COORDINATES: protein motif:HMM:NF015438.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030151 - molybdenum ion binding [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MOSC domain-containing protein"
                     /protein_id="HET9013847.1"
                     /translation="MMPGFEGRVTGLQRSAGGVPKLPVERVMVRAGGMEGDRQANRKY
                     HGGPDRALCLYSQERLDALAEVGHPASRGMLGENVTIAGLPWDRVRPGARLRIGRLEM
                     EVTSYAAPCRKIAYAFSDGDFSRVGEKANTGWSRVYARIVADGELAVGDPVTLLP"
     gene            complement(1181..2353)
                     /locus_tag="VFN38_18615"
     CDS             complement(1181..2353)
                     /locus_tag="VFN38_18615"
                     /inference="COORDINATES: protein motif:HMM:NF013347.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013848.1"
                     /translation="MRTPQPAATPQLLHCFAIVAPGLEALAFAEARELGLPAELEAGG
                     GGFAWHGDLRSLLLANAGLRIASRVVVRLAQFEARSFAELERHARQIPWARIVAPAGA
                     VRFRVTCKKSKLYHSDAVAQRLADAVTRALPGVRAEGASGAEDDAAEDDAQLFVVRLL
                     RDQCTVSADSSGALLHRRGYRQATAKAPLRETLAAALVAASGWDAASPLVDPFCGSGT
                     IPIEGALKARGTAPGGQRGFAAERWPGVSRTLGERVRAELAARAHTSALPPIAGSDRD
                     AGAIAAAVANAERAGVPGDVTFAVRPLSAMELPAGGPGWVVTNPPYGVRVGDADRVRD
                     LWAQLGHVLRERAAGWRVALLSPEPALERQLRMPLRVVAQTTNGGIPVRIVVGEVG"
BASE COUNT          326 a          961 c          777 g          315 t
ORIGIN      
        1 ggcccacagc ccgcccgcgg gtccgatggt cgcgcgatcc cgcatctttc cttcgcgccc
       61 caccgacagg gcgacgcggt tcagctcatc ggccagccgc ccctgcttgg tgaccacgct
      121 gttgaagatg tcggcgatct cggccatgag cggatcgccc agcggctcga gacgcacgct
      181 gaagtcgccg gcgtcgacgg cgcgcaggcc ggcgaggaac cggcgcatcg cgcgctcgcg
      241 ttccagtccg cctcgcccgc ccccgccccc gtcgccgccc ccgttccctc cctccagcgt
      301 cgtcacacca ccgacctcac ccgtctcgtc gatctcctgg agatcgtcgt tcagcgagct
      361 ggcggcggcc cggcgggggc gaccgcgctt cccgcgcgcg ctcccggcgg cggtgcgtcc
      421 atttcctcgc ccggcagcgg gcgacttctc gtggtcaggc acttctggtc tctcgccgac
      481 gctcacggtc agctcctatg aggaaagaga ggatacgaaa ggccaccggc gggggtcggt
      541 ggcgagcaga cgcgcacgcc ggagcctcgg ctccgacagc gcgggatttc actcggtacg
      601 acggatttcc cgggctggaa cagcggagcg cgactacggt cttgaaacgc tccggacgga
      661 gcgatcactg caagttccac gctccatata gatccattga tattgttcca tcaggggagc
      721 agcgtcaccg ggtcgcccac ggcgagctcg ccatccgcaa cgatacgcgc gtataccctg
      781 ctccagccag tgtttgcctt ctcgccaacg cgcgaaaaat ccccgtcgga aaaggcgtac
      841 gcgatcttcc ggcacggcgc ggcgtagctc gtcacctcca tctccagcct gccgatccgc
      901 aggcgcgccc cgggccgcac ccgatcccac ggcaacccgg cgatcgtgac gttctccccc
      961 agcatccccc ggctcgccgg gtgccccacc tccgcgagcg cgtccagccg ctcctgcgag
     1021 tagaggcaga gcgcgcgatc cggtccgccg tggtacttcc ggttggcctg gcggtcgccc
     1081 tccatgccgc cggcgcgaac catcacccgc tccaccggaa gcttcggcac cccacccgcc
     1141 gagcgctgca gccccgtcac ccgcccctcg aagcccggca tcatcccacc tcgccgacca
     1201 cgatgcgcac ggggatcccg ccattggtgg tctgggccac cacccgcagc ggcatgcgga
     1261 gctggcgctc gagcgccggc tcgggcgaca gcagcgccac gcgccacccc gccgcccgct
     1321 cgcgcaggac gtggccgagc tgtgcccaca ggtcgcgcac ccggtcggcg tcccccaccc
     1381 gcacgccgta gggtggattc gtcaccaccc acccgggccc gccggccgga agctccatcg
     1441 ccgacagcgg ccgcaccgcg aacgtcacgt cccccggaac acccgcacgc tcggcgttcg
     1501 ccacggccgc ggcgatcgcc cccgcatcgc gatcgctgcc ggcgatgggg gggagcgcgg
     1561 aggtgtgtgc ccgtgcggcc agctcggccc gcacccgctc acccagggtg cgcgacaccc
     1621 cgggccagcg ttcggccgcg aatccgcgct gcccccccgg cgccgtgcct cgcgccttca
     1681 gcgccccctc gatggggatc gttcccgagc cgcagaaggg gtccacgagc ggcgatgccg
     1741 catcccagcc ggacgccgcg acaagcgctg cggcgagcgt ctcgcgcagc ggcgccttcg
     1801 ccgtcgcctg ccggtagccg cgccggtgca gcagcgcgcc ggagctgtcc gcgctcactg
     1861 tgcactggtc gcgcagcagc cgcaccacga agagctgcgc atcgtcctcc gccgcgtcgt
     1921 cctccgcgcc gctcgccccc tcggctcgca cacccggaag ggcgcgcgtc actgcgtcgg
     1981 ccagccgctg cgccacggcg tcggagtggt agagcttcga cttcttgcag gtgacgcgga
     2041 agcgcacggc gccggccggc gccacgatgc gcgcccaggg aatctgccgc gcatggcgtt
     2101 ccagctcggc gaacgaccgg gcctcgaact gggccagccg caccaccacc cgcgacgcga
     2161 tgcgcagtcc ggcgttggcg agcagcaagc tgcgcaggtc gccgtgccag gcgaaccccc
     2221 cgcctcccgc ctccagctcc gcgggcaggc cgagctcgcg cgcctccgcg aacgcgaggg
     2281 cctcgagccc cggggcgacg atcgcgaagc agtggagcag ttgcggcgtg gcggccggct
     2341 ggggcgttcg catggctagc gcgtgctctc gccggcgag
//
LOCUS       DASSYW010001183         2318 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1752169, whole genome shotgun sequence.
ACCESSION   DASSYW010001183 DASSYW010000000
VERSION     DASSYW010001183.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2318)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2318)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2318
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1752169"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..901
                     /gene="purM"
                     /locus_tag="VFN38_18620"
     CDS             <1..901
                     /gene="purM"
                     /locus_tag="VFN38_18620"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004641 -
                     phosphoribosylformylglycinamidine cyclo-ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HET9013849.1"
                     /translation="FGGMFRMPAEAHRPVLVSSADGVGTKLRVAIEANRHGTVGHDLV
                     NHCVNDVLVQGAVPLFFLDYFAAGVLVPEVVEAVVTGVAAGCRENGCSLVGGETAEMP
                     GIYTPPDYDLAGFIVGCVEEDAILGADRVEEGDVLVGLESSGLHTNGYSLARRIVFER
                     MGLGVHDPFPGEAGTVADVLLRVHRSYLPVLRPVLGRMHAMAHITGGGLPGNVNRALP
                     DTLDAVIDAGSWELPNLYRQLERAGQVDRAEMYRTFNMGVGMVVITDEAGAEAVQASA
                     ESAHIGNWRLGRIVRGAGQVRIT"
     gene            911..1948
                     /locus_tag="VFN38_18625"
     CDS             911..1948
                     /locus_tag="VFN38_18625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013850.1"
                     /translation="MKKFLVIAAGISILAASNAQAQGGGLANPVCPAGTNQATRVAQD
                     ACQQAYDVYQFMAPQLGAAIVGGNATLGQGSTLGGLGHFSVGVRGNAFKGDLPDVQNF
                     TQRSAGASPPATLPTKTQFVGLPAADLAIGIFGGLPLALTNVGGVDLLVSANYVPTID
                     QNNVKITPKQNLQFGYGARIGLLSESIIVPGVSLTYLKRDLPTTTIAGTANYTSTATG
                     PTTATFAITNGKVNTSAWRLVASKSLLIVGLAAGVGQDKYDQSADIAATVQGTLPVPF
                     TQSMTVPATTQSLTRTNYFLDASMNILLLKLTAEVGQVSGGTVNTYNAFQSGRADDAR
                     TYFALGARLGI"
     gene            1953..>2318
                     /gene="ribD"
                     /locus_tag="VFN38_18630"
     CDS             1953..>2318
                     /gene="ribD"
                     /locus_tag="VFN38_18630"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: protein motif:HMM:TIGR00326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA];
                     GO_function: GO:0008835 -
                     diaminohydroxyphosphoribosylaminopyrimidine deaminase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HET9013851.1"
                     /translation="MDDRERAATPDDGAWMRRALSLAARGWGQTAPNPMVGAVVVRDG
                     VVVGEGWHTRHGAAHAEVDALRAAGERARGSTLYVTLEPCNHHGKTPPCTEAILGAGV
                     QRVVAAVGDPNPVAGGGADR"
BASE COUNT          357 a          760 c          857 g          344 t
ORIGIN      
        1 gttcggcggc atgttccgga tgccggccga ggcccaccgt ccggtgctgg tctccagcgc
       61 cgacggcgtg ggcacgaagc tgcgcgtcgc catcgaggcg aaccggcacg gcaccgtcgg
      121 gcacgacctc gtcaaccact gcgtcaacga cgtgctcgtg cagggggcgg tgccgctgtt
      181 cttcctcgac tacttcgccg ccggcgtgct ggtgccggaa gtcgtggagg ccgttgtgac
      241 gggcgtcgca gcgggatgcc gtgagaatgg gtgttcgttg gtgggtggcg agacggccga
      301 gatgcccggc atctacacgc cgccggacta cgacctcgcg ggcttcatcg tcggatgcgt
      361 ggaagaggat gcgatcctgg gcgcggatcg cgtcgaggaa ggcgacgtgc tggtggggct
      421 ggagagcagc ggattgcaca ccaacggtta ctcgctcgcg cggcgcatcg tctttgaacg
      481 gatgggattg ggtgtccacg acccgttccc tggcgaggcc ggcaccgtgg cggacgtgct
      541 gctgcgggtg catcggtcgt atctccccgt gctgcgtccc gtgctgggcc ggatgcatgc
      601 gatggcgcac atcacggggg gtggactgcc cggcaacgtg aatcgggcgc tccccgacac
      661 gctggatgcg gtcatcgacg caggaagctg ggagctgccg aacctctatc ggcagctgga
      721 gcgggccggc caggtggacc gggccgagat gtaccggacg ttcaacatgg gcgtcgggat
      781 ggtcgtcatc accgacgaag cgggcgccga ggcagtgcag gcgagcgccg agtcggctca
      841 catcggcaac tggcggctcg ggcgcatcgt gcgcggggcc gggcaggtgc gcatcaccta
      901 ggagcacgac atgaagaaat tcctcgtcat cgcggccggt atctcgattc tcgcggcgtc
      961 caatgcacag gcgcagggcg gtgggctggc gaacccggtc tgtccggccg gcaccaacca
     1021 ggcgacgcgc gtcgcgcagg acgcctgcca gcaggcgtac gacgtgtatc agttcatggc
     1081 gccgcagctc ggcgcggcga tcgtcggcgg taacgcgacg ctcggccagg ggtccacgct
     1141 cggcggtctc ggacacttct cggtcggcgt gcgcggcaac gcgttcaagg gcgacctgcc
     1201 cgacgtccag aacttcacgc agcgctcggc cggcgcgtcg cccccggcga cgctgccgac
     1261 gaagacccag ttcgtgggcc tgcccgcggc ggacctggcg atcggcatct tcggcggcct
     1321 gccgctggcg ctgacgaacg tcggcggtgt cgacctgctc gtgagcgcga actacgtgcc
     1381 gacgatcgac cagaacaacg tgaagatcac gccgaagcag aatctgcagt tcggctacgg
     1441 cgcgcgcatc gggctgctgt cggagtcgat catcgtgccc ggcgtgtcgc tgacgtacct
     1501 caagcgcgac ctgccgacga cgacgatcgc cgggaccgcg aactacacct ccaccgcgac
     1561 ggggccgacg accgccacgt tcgcgatcac gaacggcaag gtgaacacgt ccgcctggcg
     1621 gctcgtcgcc agcaagagcc tgctgatcgt cgggcttgcg gcgggcgtcg gccaggacaa
     1681 gtatgatcag tcggcggaca tcgcggccac ggtgcagggc acgctgccgg tgccgttcac
     1741 gcagtcgatg accgtgccgg cgaccacgca gtcgctcacg cgcaccaact acttcctcga
     1801 tgcgtcgatg aacatcctgc tgctcaagct cacggcggaa gtgggacagg tgtcgggcgg
     1861 cacggtgaac acgtacaacg cgttccagtc gggtcgcgcc gacgacgcgc gcacgtactt
     1921 cgccctcggc gcgcgcttgg gcatctgacg agatggacga ccgggagcgc gcggccacgc
     1981 cggacgacgg cgcatggatg cgccgcgcgc tctccctcgc cgcacgaggg tggggacaga
     2041 cggcgccgaa cccgatggtc ggcgccgtcg tcgttcgtga cggagtcgtc gtcggcgaag
     2101 ggtggcatac gcgccacggc gcggcgcacg ccgaggtgga cgcgttgcgg gcggccgggg
     2161 agcgcgcgcg cggctcgacg ctgtacgtca cgctcgagcc gtgcaatcat cacggaaaga
     2221 cgccgccctg cacggaggcc atcctcggtg cgggcgtcca gcgcgtcgtg gcggccgtcg
     2281 gggatccgaa tccggtcgcg ggcggcgggg ccgatcgg
//
LOCUS       DASSYW010001184         3477 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1192833, whole genome shotgun sequence.
ACCESSION   DASSYW010001184 DASSYW010000000
VERSION     DASSYW010001184.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3477)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3477)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3477
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1192833"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..530
                     /locus_tag="VFN38_18635"
     CDS             <1..530
                     /locus_tag="VFN38_18635"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HET9013852.1"
                     /translation="DIQAKEIEPKIASNPGYLEAENLEYYKDGGVTRIRQKPGPKNSL
                     GFVKFLFPNDFNIYLHDTPNHALFEKDVRAFSHGCIRVEKPTELAEWVLGWDAAKVQQ
                     AMEQGPDNSPVKLPRKLPVYITYGTAYIRDGLLYFGNDLYHRDDKLVQAAAQGAMPSA
                     RVVQALEALGRIAKG"
     gene            complement(565..1608)
                     /locus_tag="VFN38_18640"
     CDS             complement(565..1608)
                     /locus_tag="VFN38_18640"
                     /inference="COORDINATES: protein motif:HMM:NF020498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase domain-containing protein"
                     /protein_id="HET9013853.1"
                     /translation="MRRRVKAVLSVVSCAAAVAAIAVSDGGFSRARIATVSGQVVGVA
                     ATITGQTALLADAVTTGRHMGFDTGEYPGDAAMRAWRTGGAPYEWTGYYLPAPCHPDD
                     GWSGKRETLTSMGYGLAVIYVGQQTWGRMPGKPHFVPVTVARKVRTRVGRGAKRRWVT
                     RTVRRTVMRKAPPPPKDATCNADFVTAARGVTDAQDAIARTEREGFVRGTTVFLDVEY
                     MDLTPKPMRDYYSAWVRTMLDDGRYRPGIYVHTNNADVVYNDVKREYLASGLTEEPPF
                     WVAKSHGFDIHKLPSEMGHAFAAVWQGVLDVEQTWAGHKIPIDVNVAGSPSPSAASLA
                     SYVKEALTARVAD"
     gene            1811..2413
                     /locus_tag="VFN38_18645"
     CDS             1811..2413
                     /locus_tag="VFN38_18645"
                     /inference="COORDINATES: protein motif:HMM:NF025013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4142 domain-containing protein"
                     /protein_id="HET9013854.1"
                     /translation="MISVTRRTPLALACAATLVVACAKSDKSADSARLADSAAAAAAA
                     PAPAPAAPALTDANIVAILDGANVADSAAGSIAAAKGTSSEVKSFGRDMMRDHHALRV
                     AGLDLAKKLNVTPAMPAGDNSEAAAAAFRDSLNTMPRGAAWDKAYMNHEVAYHESVLN
                     TAQTALAAAQNSELKDLIQKAAPNIQAHLEHAKQIQSKLP"
     gene            2526..2978
                     /locus_tag="VFN38_18650"
     CDS             2526..2978
                     /locus_tag="VFN38_18650"
                     /inference="COORDINATES: protein motif:HMM:NF023403.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013855.1"
                     /translation="MATSRDSSGGPAQRGGDAPGSLVLVDGSNVAHSSEGDQALLANI
                     TAVCDKLREEGYEPLVVVDAALRHQIDNRAAYERLVDSGAIRQAPAGTDADYFILSFA
                     RELDASIVSNDRFRDRLRSFPDASKRLIRYMVLKGEVVFERRTGPRHD"
     gene            3243..>3477
                     /locus_tag="VFN38_18655"
     CDS             3243..>3477
                     /locus_tag="VFN38_18655"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HET9013856.1"
                     /translation="MPSPMTAGPSLSLVIPVYNAADQLPATLAAVDAFAARYPDSIEI
                     VFVDDHSTDVETQRLLEGYARRRPYARVLRNSTN"
BASE COUNT          530 a         1272 c         1170 g          505 t
ORIGIN      
        1 cggacatcca ggccaaggag atcgagccca agatcgccag caatcccggc tacctggaag
       61 cggagaacct cgagtactac aaggacggcg gcgtcacgcg catccggcag aagcccggcc
      121 ccaagaactc gctcggcttc gtgaagttcc tcttcccgaa cgacttcaac atctacctgc
      181 acgacacgcc gaaccatgcg ctgttcgaga aggacgtgcg cgccttcagc cacggctgca
      241 tccgcgtgga gaagccgacc gagctggccg agtgggtgct cggatgggat gccgcgaagg
      301 tgcagcaggc aatggagcag gggccggaca attcgccggt gaagctgccg cgcaagctgc
      361 ccgtgtacat cacctacggc acggcgtaca tccgcgacgg gctgctgtac ttcgggaacg
      421 acctctatca ccgcgacgac aagctggtgc aggcggcggc gcagggcgcg atgccgtccg
      481 cgcgtgtcgt gcaggcgctg gaggcgctgg ggcggatcgc gaaggggtga gtgtcaggca
      541 cccgcgcgcg gtggagcgct ggcgtcagtc cgccacgcgc gcggtgagtg cttccttgac
      601 gtagctcgcg agcgacgcgg ccgacggtga gggcgagccg gcgacgttca cgtcgatcgg
      661 gatcttgtgg ccggcccacg tctgctccac gtcgagcacg ccctgccaca cggcggcgaa
      721 ggcgtggccc atctcgctcg gcagcttgtg gatgtcgaag ccgtgcgact tcgccaccca
      781 gaacgggggc tcctcggtga ggccgctcgc gaggtactcg cgcttcacgt cgttgtacac
      841 gacgtccgcg ttgttcgtgt gcacgtagat ccccgggcgg tagcggccgt cgtcgagcat
      901 ggtgcgcacc caggccgagt agtagtcgcg catcggcttc ggggtgaggt ccatgtactc
      961 gacgtcgagg aacacggtgg tgccgcgcac gaacccctcg cgctcggtgc gggcgatcgc
     1021 gtcctgcgcg tcggtcacgc cgcgcgccgc ggtcacgaag tcggcgttgc aggtggcgtc
     1081 cttcggcggc ggcggcgcct tgcgcatcac cgtccgtcgc accgtgcgcg tcacccaccg
     1141 ccgcttcgcg ccgcgtccca cgcgcgtgcg caccttcctg gcgaccgtca ccgggacgaa
     1201 gtgcggcttg ccgggcatgc gtccccacgt ctgctgcccc acgtagatca cggcgagccc
     1261 gtagcccatc gacgtcagcg tttcgcgctt gcccgaccag ccgtcgtcgg gatggcaggg
     1321 ggcgggcagg taatagcccg tccactcgta cggcgcgccg ccggtgcgcc aggcgcgcat
     1381 cgcggcgtcg cccggatact cgcccgtgtc gaagcccatg tgccgccccg tcgtcaccgc
     1441 atcggcgagc agcgccgtct gccccgtgat cgtggcggcg acgccgacga cctgtcccga
     1501 gacggtggcg atgcgcgcgc gcgagaagcc gccgtcgctc accgcgatgg cggcgacggc
     1561 ggcggcgcag gacacgacgg acagcactgc tttgacgcga cgacgcaagg gcactctccg
     1621 gcgaacggct tcgacctgac cctaccccgg caggggcgga tcggtccggg atcttcacgg
     1681 gctgatgtaa ggcatcccct gcgccgttcc agcgagctgg gccgtactgc gagtctcgcc
     1741 gtcgtatgct tcttgcgctg cggtgtgagg ttcgatcagc acttcccgtc cgaccccgtc
     1801 cggaggcccg atgatcagcg taacgcgccg tacccccctc gcccttgcct gtgccgccac
     1861 gctcgtcgtc gcgtgcgcga agagcgacaa atccgccgac agcgcccggc tcgccgattc
     1921 cgcggccgcc gcggccgccg ctcccgctcc cgcccccgcc gcgcccgcgc tcaccgatgc
     1981 caacatcgtc gccatcctgg acggcgcgaa cgtggccgac agcgccgccg gctccatcgc
     2041 cgccgccaag gggaccagca gcgaagtcaa gtcgttcggc cgcgacatga tgcgcgacca
     2101 tcacgcgctg cgcgtggcgg gcctcgacct ggccaagaag ctcaacgtca ccccggcgat
     2161 gccggccggc gacaacagcg aggcggccgc cgcggccttc cgcgacagcc tgaacaccat
     2221 gccccgcggt gccgcctggg acaaggcgta catgaaccac gaagtcgcct accacgagtc
     2281 ggtgctcaac accgcgcaga ccgcgctcgc cgcggcgcag aactcggagc tcaaggacct
     2341 gatccagaag gccgcgccca acatccaggc gcacctcgag cacgcgaagc agatccagtc
     2401 caagctgccg taacggcggt ccggctcccc ggtctggaac ttgaaagagc gctcggcatt
     2461 cgccgggcgc tcttcgtatc cgcgtcgcac gtcgatcggc ggtgtgcact tcattcgggg
     2521 agctgatggc gacttcgcgc gactcatcgg gcggtccggc gcaacggggc ggcgacgcac
     2581 ccggctcgct cgtgctcgtg gacggttcca acgtggctca ctccagcgag ggcgaccagg
     2641 cgctgctggc gaacatcacg gcggtgtgcg acaagctgcg cgaggagggc tacgagccgc
     2701 tggtggtggt ggacgcggcg ctgcgacacc agatcgacaa ccgcgcggcg tacgagcgcc
     2761 tcgtggacag cggcgcgatc cgccaggcac ccgccggcac cgacgccgac tacttcatcc
     2821 tctccttcgc gcgcgagctc gacgcgtcca tcgtgtccaa cgaccgcttc cgcgaccggc
     2881 tgcgctcgtt tcccgacgcc tcgaagcgcc tgatccggta catggtgctc aagggagagg
     2941 tcgtgttcga gcgccggacg ggcccgcggc acgactgagg gagggcgcca cgcgcgggtg
     3001 actcgcggcg cgccggctcg tccccgcacc aggcgcccgt cgcaccgcga ctccgcgcgc
     3061 ggcggcgcca gtggcgagcg gacggccgaa tccgttagct tgagccccgc ggttcgcgct
     3121 tcggcacgct tgcgcgcacc atctaccggc ggcaggtggc gtccgatcat gtacccgccc
     3181 cgcgcacgaa ccgtttgctc tccccaccgg agacgatgtc tccacctgtc cgagaggcct
     3241 cgatgccgag tccgatgacg gccggtccgt ccctgtcgct cgtgatcccg gtgtacaacg
     3301 cggccgacca gctgccggcg accctcgccg cagtcgacgc cttcgccgcg cgctacccgg
     3361 actcgatcga gatcgtgttc gtcgacgacc actcgacgga cgtcgagacg cagcgcctcc
     3421 tcgaaggcta cgcgcgccgc cgcccgtacg cgcgcgtgct ccgcaactcc acgaatc
//
LOCUS       DASSYW010001185         2786 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_548156, whole genome shotgun sequence.
ACCESSION   DASSYW010001185 DASSYW010000000
VERSION     DASSYW010001185.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2786)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2786)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2786
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_548156"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..547)
                     /locus_tag="VFN38_18660"
     CDS             complement(<1..547)
                     /locus_tag="VFN38_18660"
                     /inference="COORDINATES: protein motif:HMM:NF013739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HET9013857.1"
                     /translation="MTDAPRTAVIGAGVAGLTAAYRLAQAGHRCDVYERWPGLGGQAA
                     TLDVGGGHLLERYYHHLFTSDRHISELYRELGMPDELEWRPSSVAMFADGKSHPFTSP
                     MDLLRFSPMSLPARLRMGAAVVWLQRRHKDVAPMERLTAREWILKAMGRQAWDKVWGP
                     MLRGKFGDRGEEISMAWLWSKL"
     gene            complement(547..1530)
                     /locus_tag="VFN38_18665"
     CDS             complement(547..1530)
                     /locus_tag="VFN38_18665"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HET9013858.1"
                     /translation="MPGRTLTLLSVVSPMYNEEETVEEFYARATAALEGRPYELVLVN
                     DASSDRTPELLDRLAATDPRVRVLHLSRNFGHQAALTAGLEHARGDAVAMLDGDLQDP
                     PELILEMLEHWTAGSDVVFAKRTTRPGESRFKLATAHGFYRLFGKLSDIELEQNAGDF
                     RLLDRRALDSLLSMPERNRFLRGMTVWIGYTQTAVPYQRDARHAGETKYTLRKMLRFS
                     FDAISSFSWLPLQAATLLGFLFSAVAFLMLPLVVVARFSGIYVPGVASILFVILLLGG
                     IQLITVGIIGEYVGRIYDEVKGRPLYLVRESRNIDVPPSPDAEESERIPTS"
     gene            1571..2464
                     /locus_tag="VFN38_18670"
     CDS             1571..2464
                     /locus_tag="VFN38_18670"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HET9013859.1"
                     /translation="MPALCAACSSPVLVPHLSVAGDAGDQGLVPTTDRFGTALADIVR
                     CPACSHMQLERFPGDAELGEAYGEAASEDYVEEEAGQRATARVALDRIERYAPKGALL
                     DLGCWVGFLLAEARERGWETVGIEPSGFASSYARDELGLDVRTEDLLTADLPEGRFSA
                     VVLGDVIEHLPRPDEALDRIAKLLAPDGVLYMAVPNAGSRLAKAMGARWWSVIPTHVQ
                     YFTRPSLFTLLRRCGWEPLYAGTAPKAFSVRYYLERIGGYSPPLARALVRAAEAAGRA
                     DAMWAPDFGDRMAVIARPTAR"
     gene            2505..>2786
                     /locus_tag="VFN38_18675"
     CDS             2505..>2786
                     /locus_tag="VFN38_18675"
                     /inference="COORDINATES: protein motif:HMM:NF014877.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013860.1"
                     /translation="MAQVDPGIFKAYDVRGLHGEQLDGDGAYLIGRAFARVLGGLEGK
                     QPADLRVGLGRDMRLTAPEMAARYADGIRDAGASVVDAGQVGTEMLYFLV"
BASE COUNT          388 a          992 c         1009 g          397 t
ORIGIN      
        1 tgagcttcga ccacagccat gccatcgaga tctcctcgcc gcggtcgccg aactttcctc
       61 gcaacatcgg cccccagacc ttgtcccacg cctggcggcc catcgccttg aggatccact
      121 cgcgcgcggt cagccgctcc atcggcgcga catccttgtg cctgcgctgg agccaaacca
      181 cggcggcgcc catgcgcagg cgcgcgggca gcgacatcgg gctgaaccgc aacaggtcca
      241 tcggcgacgt gaacgggtgc gacttgccgt cggcgaacat cgcaacgctc gacggccgcc
      301 attcgagctc gtccggcatc cccagctcgc ggtacagctc ggagatgtgg cggtcgctcg
      361 tgaacaggtg gtggtagtag cgctcgagca ggtgcccgcc gcccacgtcg agcgtggcgg
      421 cctggccgcc gagcccgggc cagcgctcgt acacgtcgca gcggtggccc gcctgggcga
      481 gcctgtatgc ggccgtgaga ccggcgactc ccgcgccgat caccgccgtt cgcggtgcgt
      541 ctgtcactac gaggtgggta tccgctcgga ctcttcagcg tccggtgacg gcgggacgtc
      601 gatgttgcgc gactcgcgca cgaggtagag cggccggccc ttcacctcgt cgtagatccg
      661 gcccacgtac tcgccgatga tcccgaccgt gatgagctgg atgccgccca ggagcaggat
      721 gacgaacagg atgctggcca cgccgggcac gtagatcccg gagaagcgcg ccaccaccac
      781 gagcggcagc atcaggaacg cgacggcgct gaacaggaag cccagcagcg tggcggcctg
      841 gagcgggagc cacgagaacg acgagatcgc gtcgaacgag aagcgcagca tcttgcgcag
      901 cgtgtacttc gtctcgcccg cgtggcgcgc gtcgcgctgg tagggcaccg cggtctgcgt
      961 gtagccgatc cagacggtca tcccgcgcag gaagcggttg cgctcgggca tcgagagcag
     1021 cgagtcgagc gcgcgccggt cgaggagccg gaagtctccg gcgttctgct cgagctcgat
     1081 gtccgacagc tttccgaaca ggcggtagaa cccgtgcgcc gtggcgagct tgaagcggct
     1141 ctcccccggc cgcgtggttc gcttggcgaa cacgacatcc gagccggcgg tccagtgctc
     1201 gagcatctcg aggatcagct cgggcgggtc ctggaggtcg ccgtcgagca tggccacggc
     1261 gtcgccgcgc gcgtgctcga gcccggcggt gagcgcggcc tggtggccga agttgcgcga
     1321 gaggtggagc acgcggacgc gcggatcggt ggcggcgagc cggtcgagca gctcgggcgt
     1381 gcggtcgctg ctcgcgtcgt tcacgagcac cagctcgtag ggccgcccct cgagcgcggc
     1441 ggtggcgcgc gcgtagaact cctcgacggt ctcctcctcg ttgtacatcg gcgagacgac
     1501 gctgaggagc gtgagcgtgc ggccgggcat gcttcggact gtaccccgta gcccctacag
     1561 ttccgccgcc gtgccagccc tctgcgcagc ctgctcctcc cccgtgctcg tgccgcacct
     1621 cagcgtcgcg ggcgacgccg gcgaccaggg cctcgtgccc accaccgacc gcttcggcac
     1681 cgcgctggcg gacatcgttc gctgcccggc gtgcagccac atgcagctcg agcgcttccc
     1741 gggcgacgcc gagctgggcg aggcgtacgg cgaggcggca tcggaggact acgtcgagga
     1801 ggaggccggc cagcgcgcca ccgcgcgcgt cgcgctcgac cggatcgagc ggtacgcgcc
     1861 gaagggcgcg ctgctcgacc tcggctgctg ggtggggttc ctgctggccg aggcgcgcga
     1921 gcgcggctgg gagaccgtgg ggatcgagcc gagcgggttc gcgtcgtcgt acgcgcgcga
     1981 cgagctcggc ctcgacgtgc gcaccgagga cctcctcacg gcggacctgc cggaggggcg
     2041 cttcagcgcc gtcgtgctcg gcgacgtgat cgagcacctc ccccgccccg acgaggcgct
     2101 cgaccggatc gcgaagctgc tggcgccgga cggcgtgctc tacatggcgg tgccgaacgc
     2161 gggcagccgg ctcgcgaagg cgatgggggc gcgctggtgg tcggtgatcc ccacgcacgt
     2221 ccagtacttc acgcgcccgt cgctcttcac cctgctgcgc cgctgcggct gggagccgct
     2281 ctacgcgggc acggctccga aggcgttcag cgtgcgctac tacctcgagc ggatcggcgg
     2341 ctactcgccg ccgctggcac gcgcgctcgt gcgcgccgcc gaggccgccg ggcgcgccga
     2401 cgcgatgtgg gcgcccgact tcggcgaccg catggccgtg atcgcgcgtc cgacagcgcg
     2461 ctgaccccgt ctccgtcggg ccactgacta gagtcagcgc gctaatggcg caggtcgacc
     2521 ccggcatctt caaggcgtac gacgtccgcg gcctccacgg cgagcagctc gacggcgacg
     2581 gcgcctacct gatcggccgc gcgttcgcgc gcgtgctcgg cggcctcgag ggcaagcagc
     2641 cggcggacct gcgggtcggc ctcggccgcg acatgcggct caccgcgccg gagatggccg
     2701 cccgctacgc cgatggcatc cgcgacgcgg gcgcgagtgt ggtggacgcc ggccaggtgg
     2761 gcacggagat gctctatttc ctcgtc
//
LOCUS       DASSYW010001186         2333 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1512631, whole genome shotgun sequence.
ACCESSION   DASSYW010001186 DASSYW010000000
VERSION     DASSYW010001186.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2333)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2333)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2333
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1512631"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..641
                     /locus_tag="VFN38_18680"
     CDS             <1..641
                     /locus_tag="VFN38_18680"
                     /inference="COORDINATES: protein motif:HMM:NF020795.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="YwqG family protein"
                     /protein_id="HET9013861.1"
                     /translation="APLTFLASLDLASLQAALPVPWLPASGCLLFFYDAEKQPWGFDP
                     KDRGSFVVVHASGDAAPPAAPPVAALPHRNVSLGVIDTYPSWERPDVASLQLTDAEAE
                     MLIDARLAAYGESPHHQVWGFPDPIQGDEMELECQLVSHGLYCGDSSGYLSREAALLK
                     EGAGDWRLLLQIDTDEELGVMWGDGGILYFWIREEDARAGRFDQAWAVLQCY"
     gene            632..1393
                     /locus_tag="VFN38_18685"
     CDS             632..1393
                     /locus_tag="VFN38_18685"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HET9013862.1"
                     /translation="MLLRLLAVALLLWSSSPVAADELRVMTSGTFTAAFLELAPRFER
                     ATGHRAVAATTTMGVGADSIPSRLQRREPADVVILDDSAMTQLIADGAVVAGSRTPLA
                     RSGIGMAVRAGTPKPDISSVEALTRTLLAAKSIAYSSSVSGRYLTTELFQRLGIADRV
                     LPKSRRIEGERVGAVVARGDAELGFQQTSELLPVPGIDYVGPLPAAVQRVSVFSAGVT
                     VHSGNRTAAESLIRFLASAEAAEAVARTGLEPVAR"
     gene            1396..1938
                     /locus_tag="VFN38_18690"
     CDS             1396..1938
                     /locus_tag="VFN38_18690"
                     /inference="COORDINATES: protein motif:HMM:NF018028.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HET9013863.1"
                     /translation="MIVGYVVVPAIVFGLAYFPIVTFLARGLASAYGKANLRRRFLAA
                     GVDASLVVTGVVFYGATGGVPFLIGSAVYLVMRDAVAGRSVGKSLFGLVAMHLESGRP
                     AGPMASLRRNLLFLLPGANLMAVGLESLTIVRDPQGQRLGDRLAQTQVVEGLAASELV
                     RAAGGWWPFAQRRERRRQAA"
     gene            1935..>2333
                     /locus_tag="VFN38_18695"
     CDS             1935..>2333
                     /locus_tag="VFN38_18695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HET9013864.1"
                     /translation="MKAVCVFTGSSRGVRPEYLAAATELGSLLAARRIRLVYGGARVG
                     LMGAVADAALGSGGEVIGVIPAALVAKEVAHTGLTDLRVVDSMHERKALMSDLADAFV
                     ALPGGWGTLEEFFEVLTWAQLGLHRKPCGLL"
BASE COUNT          292 a          775 c          872 g          394 t
ORIGIN      
        1 gcgcgccgct cacgtttctc gcgtctctcg atctggcctc gctgcaggcg gcgttgcccg
       61 tgccgtggct gccggcgtcc ggctgtctgc tgttcttcta cgacgccgag aagcagccgt
      121 gggggttcga tccgaaggat cgcggcagct tcgtcgtcgt ccacgcatcc ggcgacgccg
      181 cgccgcccgc ggcgccgccg gtggcagcgt tgcctcaccg gaacgtgtcg ctcggcgtga
      241 tcgacacgta cccgtcctgg gagcggccgg acgtcgcgtc gctgcagctc acagacgcgg
      301 aggcggaaat gctgatcgac gcgcgcctgg cggcgtacgg tgagtcgccg caccatcagg
      361 tgtggggctt tccagacccg attcagggcg acgaaatgga gctcgagtgc cagctcgtgt
      421 cgcacggtct ctactgcggc gattcgtcgg gctatctcag ccgcgaagcg gcgttgctga
      481 aggagggtgc cggggactgg cggctgctcc tgcagatcga caccgacgag gagctcggcg
      541 tgatgtgggg tgacggcggc atcctctact tctggatccg cgaagaggac gcgcgcgccg
      601 gacggttcga ccaggcgtgg gcggtgctgc agtgctactg aggctcctcg ccgtcgcact
      661 ccttctgtgg tcgtcgtcgc ccgttgcggc cgacgagctg cgcgtgatga cgtcgggcac
      721 gttcaccgcc gcattcctcg agctggcgcc gcgcttcgag cgggccaccg gccaccgagc
      781 ggtggcggct acgaccacga tgggagtcgg cgcggactcg atccccagcc gcctgcagcg
      841 ccgcgagccg gccgacgtcg tcatcctcga cgacagcgcg atgacgcagc tcatcgccga
      901 cggcgcggtg gtggcaggca gccgtacgcc gctcgcgcgg tccgggatcg gcatggcggt
      961 gcgcgccgga acgccgaagc ccgacatcag ctcggtggag gcgctgacgc gcacgctgct
     1021 ggcggcgaag tcgatcgcgt actcgtcgag cgtcagcggc cgctatctca cgacggagct
     1081 ctttcagcgg ctgggcatcg ccgatcgagt gctgcccaag agccggcgta tcgaagggga
     1141 gagggttggc gccgtcgtgg cgcgcggcga cgccgagctc gggttccagc agacgtccga
     1201 gctgctgccc gtgccgggca tcgactacgt cgggccgctg ccggcggccg tgcagcgggt
     1261 gagtgtgttt tcggccggcg tcacggtgca ctcgggcaat cgcaccgccg ccgaatcgtt
     1321 gattcgcttc ctcgcgtccg ccgaggctgc cgaggcggtg gcccgcaccg ggctcgagcc
     1381 ggtcgcgcgg tgaacatgat cgtcggctac gtcgtcgtcc cggcgatcgt gttcgggctc
     1441 gcgtacttcc cgattgtcac gttcctcgcg cgcgggctgg cctccgcgta cggcaaggcc
     1501 aacctccgca ggcgcttcct cgcggcaggc gtcgacgcgt ctctggtggt cactggcgtc
     1561 gtgttctacg gtgccaccgg cggcgtgccc tttctgatcg gctcggccgt gtatctggtg
     1621 atgcgggacg cagtggccgg acgcagcgtc ggcaagtcct tgttcgggct ggtggcgatg
     1681 catctcgaaa gcggccggcc cgccgggccg atggcgtcgc tgcgccgcaa cctgctgttc
     1741 ctccttccag gcgccaacct catggccgta ggtctcgaga gcctcaccat cgtgcgagat
     1801 ccgcaggggc agcggctcgg cgatcgtctg gcgcagacgc aggtggtcga ggggctcgcg
     1861 gcaagcgagc tcgtgcgagc cgccggcggg tggtggccgt tcgcgcaacg ccgggagcgc
     1921 cggcggcagg cggcatgaag gctgtctgcg tgttcacggg atcgagccgt ggcgtgcgac
     1981 ccgagtatct ggcggccgcc accgagctgg ggagcctgct ggccgcgcgc cgcattcggc
     2041 tcgtgtacgg cggcgcccgg gtcgggctta tgggcgcagt ggccgacgcc gcgctgggga
     2101 gcggtggaga ggtgatcggt gtcatccccg cggcgctcgt cgcgaaggaa gtcgcgcaca
     2161 ctgggctgac cgatctgcgc gtcgtggact cgatgcacga gcgcaaggcg ctcatgtccg
     2221 atctggcaga cgcgttcgtg gcgttgcccg gcggctgggg gacgctcgaa gagttcttcg
     2281 aggtgctcac ctgggcgcag ctcgggctgc accgcaagcc gtgcgggctg ctc
//
LOCUS       DASSYW010001187         3528 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_50635, whole genome shotgun sequence.
ACCESSION   DASSYW010001187 DASSYW010000000
VERSION     DASSYW010001187.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3528)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3528)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3528
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_50635"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            145..600
                     /locus_tag="VFN38_18700"
     CDS             145..600
                     /locus_tag="VFN38_18700"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HET9013865.1"
                     /translation="MEPVISDLVTRFERGALTRRELIGALALLAGGAAAAPAATLKSA
                     SINHVSVLVTDMQRSIDFYGRVFGLTLVNEDKANKIARLGANGKILVSLRIEPPPGVI
                     DHFAIGVDGFNREAVTADLKGFGLSPADNIQFGFHVKDPDGAVVQITGV"
     gene            complement(652..1479)
                     /locus_tag="VFN38_18705"
     CDS             complement(652..1479)
                     /locus_tag="VFN38_18705"
                     /inference="COORDINATES: protein motif:HMM:NF013867.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008983 - protein-glutamate
                     O-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-glutamate O-methyltransferase CheR"
                     /protein_id="HET9013866.1"
                     /translation="MIAVDNELALGEPELQRLSRLLYDASGITLHDGKGPLVIARLRK
                     RLMEQGYRSFAAYLDAVERDRTGAAMTELVDAMATDHTSFFREPQHFAYLQSSILPQV
                     RARRVPVPLKVWSMPCSTGEEPYSLAISLLDGGLPAGFTILASDLSTKALRRAREGVY
                     RQQTVAGLPKAVLRRHFERGVGAEDGLVRVSASLRRQVAFRRLNLIDLADLGHRFEVI
                     FCRNLLIYFDQAAQQRSIAALERHLAPGGYLFISHSESLNAVRHSLQWVAAGVYRSS"
     gene            complement(1488..1961)
                     /locus_tag="VFN38_18710"
     CDS             complement(1488..1961)
                     /locus_tag="VFN38_18710"
                     /inference="COORDINATES: protein motif:HMM:NF013731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HET9013867.1"
                     /translation="MATIATALAAPGKYLTFALADEEYALPVLKVREIIKMMEITQVP
                     KVPPHVKGVINLRGKVIPIVDLRLKFGFPPQDATERTCIIVVDAALNGGRSSLGFVVD
                     GVNEVMNIAADEIEPTPDFGEQVNTTYMQGVAKRGAHVKMLLDLDRVLSSTSLEG"
     gene            complement(1964..>3528)
                     /locus_tag="VFN38_18715"
     CDS             complement(1964..>3528)
                     /locus_tag="VFN38_18715"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HET9013868.1"
                     /translation="LTWRFGIAVGSALLTGIIVAALLVWQLHQTRQTYDQMLGQREVQ
                     HQDRARVVQLTFKKQVQEWKNLMLRGFKYDDFQKYEKAFKAEEAETRKLAEALLQDVS
                     DSDARRQIQEFLTAHQKMGEGYATAIAAFGKSNGQNFTEADGLVKGQDRAPTDSLDKL
                     AARLQAVLEEIRQQESANVSSRIVRSAAIAGVTFVAVVVLLVFVVRSTQREAAALAQR
                     LSESASSTAAASSQVSTSAQSLSQGATTQAASLEETSASMEEMASMTRQNAENSQNAA
                     GLMTEVDAQVRASNETLAEMVTSMAAIQESSQQVGRIIKTIDEIAFQTNILALNAAVE
                     AARAGEAGMGFAVVADEVRSLAQRSAQAARDTASLIEASITKTQDGSARVEQVAHAIS
                     AITSSVGKVKGLVDEVSLASKQQSQGIDQVAQAIAQMEKVTQTTAATSEESAAASEEL
                     SAQAETAMDIVRQLETLVGTRGAASQRREYAGAPRRHNTVTFSQPRPRQSMPVNPEEV
                     LPLEDTGTYGRF"
BASE COUNT          531 a         1244 c         1142 g          611 t
ORIGIN      
        1 gaccgtcccc cgcgtacgag acgaacacta cagccgccga ggcccactgc cgtttcatgc
       61 gtccggtcat cctgcctccc gccttcctgg cgggcgtaga ctacaccgac cttggacttt
      121 gggccttgga ccttgggagg acgcgtggaa cctgtcatct ccgatctggt cacccgattc
      181 gagcgcggag cgctcacgcg ccgcgagctg ataggcgccc tcgcgttgct ggccggcggt
      241 gccgcggcgg cgcccgccgc gacgctcaag agcgccagca tcaaccacgt gtcggtgctc
      301 gtcaccgaca tgcagcgctc gatcgatttc tacggccgcg tcttcggcct cacgctggtg
      361 aacgaggaca aggcgaacaa gatcgcgcgg ctgggcgcca acggcaagat tctggtgtcg
      421 ctgcgcatcg agccgccgcc cggcgtgatc gatcacttcg cgatcggcgt ggacggcttc
      481 aaccgcgagg cggtcacggc ggacctcaag gggttcggcc tgagccccgc cgacaatatt
      541 cagttcggat tccacgtaaa ggatccggat ggcgccgtcg tccagattac gggggtctaa
      601 gagccttcag cctctggcct ctagcctcta gcctctgggc aaggctaaag gctatgagga
      661 tctgtagacg ccggccgcaa cccactgcag cgagtgcctc acggcattca ggctctcgga
      721 gtgggagatg aagaggtacc cccccggcgc aagatgccgc tcgagcgcgg cgatcgaacg
      781 ctgctgcgcc gcctgatcga agtagatcag caggttgcgg cagaagatga cctcgaagcg
      841 gtgcccgaga tcggccagat cgatcagatt gagccggcgg aacgcgacct gccggcgcag
      901 cgacgcggac acgcgcacca acccgtcctc cgcgccgacg ccgcgctcga aatgccgccg
      961 cagcaccgcc ttcggcagtc cggccacggt ctgctggcga tacacgcctt cccgcgcacg
     1021 gcgcagcgcc ttcgtggaga ggtcggacgc gaggatcgtg aacccggcgg gcaggccgcc
     1081 gtcgagcagc gagatggcga gtgaatacgg ctcctcgccg gtggagcacg gcatgctcca
     1141 caccttgagc ggcaccggca cgcggcgcgc gcgcacctgc ggcaggatcg acgactgcag
     1201 ataggcgaag tgctgcggct cgcggaagaa gctcgtgtgg tccgtcgcca tggcgtccac
     1261 gagctccgtc atggccgcgc cggtccggtc gcgctcgaca gcgtcgagat acgcggcaaa
     1321 cgaccggtat ccctgttcca tgagccgctt ccgcaaccgt gcgatgacga gcggcccttt
     1381 gccgtcgtgg agagtgatgc cgctggcgtc gtagagcagg cgcgaaaggc gctggagctc
     1441 gggctcgccg agcgccagct cgttgtcgac ggcgatcatg ccgcgcgtca accctccagc
     1501 gacgtggacg acaggacccg atcgaggtcg agcagcatct tcacgtgcgc gccgcgcttg
     1561 gccacaccct gcatgtaggt cgtgttgacc tgctcgccga agtcgggcgt cggctcgatt
     1621 tcgtcggcgg cgatgttcat cacctcgttg acgccgtcca cgacgaaccc gagcgagctg
     1681 cgcccgccgt tgagcgccgc gtccaccacg atgatgcacg tgcgctcggt cgcgtcctgc
     1741 ggcggaaagc cgaatttcag ccgcaggtcc acgatgggga tcaccttgcc gcgcaggttg
     1801 atgacgccct tgacgtgcgg cggcaccttc ggcacctggg tgatctccat catcttgatg
     1861 atctcgcgca ccttcagcac cggcagggcg tactcctcgt cagccagcgc gaaggtcaga
     1921 tacttgccgg gcgccgccag cgccgttgcg atggtggcca tggctagaac cgtccgtagg
     1981 tgccggtatc ttcgagcggc agcacctctt cagggttgac cggcatcgac tggcgcggcc
     2041 gcggctgcga gaaggtcacc gtgttgtgcc ggcgcggcgc gccggcgtac tcgcggcgct
     2101 gactcgcggc gccgcgcgtt ccgacgagcg tctcgagctg ccgcacgatg tccatggcgg
     2161 tctcggcctg cgcgctcagc tcctcgctgg ccgcggcgct ctcttccgac gtggcggcgg
     2221 tcgtctgcgt caccttttcc atctgcgcga tcgcctgcgc cacctggtcg atgccctgac
     2281 tctgctgctt gctcgccagg ctcacttcgt ccaccagccc cttcaccttg cccacgctgc
     2341 tcgtgatggc gctgatggcg tgcgccacct gctcgacccg ggcgctgccg tcctgcgtct
     2401 tcgtgatcga ggcctcgatc agcgacgcgg tgtcgcgagc cgcctgcgcc gaccgctgcg
     2461 cgaggctccg gacctcgtcg gccacgacgg cgaagcccat cccggcttcg cccgcgcgcg
     2521 ccgcttccac cgccgcgttg agcgccagga tgttcgtctg gaacgcgatc tcgtcgatcg
     2581 tcttgatgat ccgccccacc tgctggctcg attcctggat ggcggccatc gacgtcacca
     2641 tctccgccag cgtctcgttc gacgcgcgca cctgcgcgtc cacctcggtc atgagaccgg
     2701 cggcgttctg cgagttctcg gcgttctgcc gcgtcatcga ggccatctcc tccatcgacg
     2761 ccgacgtttc ctcgagcgac gccgcctgcg tggtggcgcc ctgcgagagc gactgcgccg
     2821 acgtggacac ctgcgacgac gccgccgccg tgctggacgc ggactcggac agccgctggg
     2881 ccagcgccgc cgcctcgcgc tgcgtggagc gcaccacgaa cacgagcagc accacgaccg
     2941 ccacgaacgt cacgcccgcg atcgccgccg accgcacgat gcgcgacgag acgttggccg
     3001 actcctgctg gcggatctcc tcgagcaccg cctgcagccg cgccgccagc ttgtcgagcg
     3061 agtcggtcgg cgcacgatcc tgccccttca ccaggccgtc ggcttcggtg aagttctgac
     3121 cgttgctctt gccgaaggcg gcgatcgcgg tcgcgtagcc ctcgcccatc ttctgatggg
     3181 cggtcaggaa ctcctggatc tggcgccgcg cgtcgctgtc ggagacatcc tgcaacagcg
     3241 cttcggcgag cttccgcgtc tcggcttctt ccgccttgaa cgccttctcg tacttctgga
     3301 agtcgtcgta cttgaagccg cgcagcatca ggttcttcca ttcctgaacc tgcttcttga
     3361 acgtgagctg cacgacgcgt gcgcgatcct ggtgctgcac ttcgcgctgg ccgagcatct
     3421 ggtcgtaggt ctggcgggtc tggtgcagct gccacacgag caaggccgcc acgatgatgc
     3481 cagtgagtag cgctgagccg acggcaatgc cgaaacgcca ggtgagat
//
LOCUS       DASSYW010001188         5009 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_142849, whole genome shotgun sequence.
ACCESSION   DASSYW010001188 DASSYW010000000
VERSION     DASSYW010001188.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 5009)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5009)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5009
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_142849"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2709)
                     /locus_tag="VFN38_18720"
     CDS             complement(<1..2709)
                     /locus_tag="VFN38_18720"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003994 - aconitate hydratase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aconitate hydratase"
                     /protein_id="HET9013869.1"
                     /translation="MTSVNSFGSRATLDVAGAKYTIYRLDVLSKASKGNSDRLPFSLK
                     ILLENLLRNEDDAFVKRADIEAMASWDVKGKVEKEIAFRTARVLLQDFTGVPAVVDLA
                     AMRDALAALGGDAQRINPLQPVDLVIDHSVQVDEYGSDAAFLINTDLEFERNVERYVF
                     LRWGQDAFRNFRVVPPGTGICHQVNLEYLGKTVFVNEETHEAYCDSLGGTDSHTTMIN
                     GLGVLGWGVGGIEAEAAMLGQPVSMLIPEVVGFKLHGKLPAGSTATDLVLTVTEMLRK
                     KKVVGKFVEFYGTGLSHLSLADRATIANMAPEYGATMGFFPVDEETLRYLRLSGRSEQ
                     HVQLVEAYTRAQGLFRTDATPDPVFTDSLELDLGTVEPSLAGPRRPQDRVPLSKAAAM
                     YREALAIDLAKQAPPVLATAATQTKPDAVKLAPDVKKAVIRQDDEGGAQQQHTDVLHA
                     DVQPEGVTCDYNGQCFTLRHGAVVIAAITSCTNTSNPGVMLAAGLLARNAVKKGLSVN
                     PWVQTSLAPGSKVVTDYFKAAGVTEYLDKLGFNLVGYGCTTCIGNSGPVPDPIAKAIE
                     DGKLFVASVLSGNRNFEGRVNPLTRYNYLASPPLVVAYALAGRMDLDLTREPLGIGSD
                     GPVFLRDIWPTAVEVQDEIMKSVKREFFTHQYADVFKGDAHWQGLKVPKGETYAWQSD
                     STYVKNPPYFEGMTMTPPGIKPIGGAKALAMLGDSITTDHISPAGNIPAASPAGKWLI
                     EHGVAKKDFNSYGARRGNHEVMMRGTFANIRLRNEMAPGTEGGWTATEPGGQPKFIYD
                     AAMEYAKQGTPLVIVAGKEYGTGSSRDWAAKGTILLGVKAVIAESFERIHRSNLVGMG
                     VLPLEFINGETRQSIGLTGFETFDIQGLDTSLAPRTTLTVGATGKDG"
     gene            2951..3928
                     /locus_tag="VFN38_18725"
     CDS             2951..3928
                     /locus_tag="VFN38_18725"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HET9013870.1"
                     /translation="MTFDSTSGSETPLTRAFGDALAARGWALVRIPAPAGRENLLATH
                     GSGPFVTLSTHLDTVPPYIPPRRAGGRLSGRGACDAKGIAAAMLCAAERLRADGVSVA
                     LLFVVGEETTHDGAHAANDWAVAQGFRSLALVNGEPTESTLALGTKGALRVVVRTAGE
                     AAHSAYPQLGRSATRDLVHLLAELDTLPMPRDPLLGDTTINIGRLAGGVADNVLAPSA
                     EARLMARLVCHADLVWDRLLQWSAGRATLERGIEAPPVKLATVPGYPTSVVAFATDIP
                     AMPAWGTPYLFGPGSIHVAHRDDEHVDTAELEAAVDAYDRLVRTVAVAR"
     gene            complement(3963..>5009)
                     /locus_tag="VFN38_18730"
     CDS             complement(3963..>5009)
                     /locus_tag="VFN38_18730"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HET9013871.1"
                     /translation="LRALAEREIVPDVYAGTSIGALIAAAHLADTPVDVLAERAQALR
                     RKDLFRLNHFGMLLDRMRAPSIYLEEPLRELVAQSIPDVDFTQLPKPLLVNSVDLDQG
                     ARVVWGLPGLQEVPVRDAVYASCALPGFFPPGRVGERTCIDGGVVDNLPVSMASHFAD
                     IIIAVDVGSSDASQAARAEGQGFATIYMRAATMMMHALQQFPLERWHGPPMVLIRPRL
                     NDANWLSFTDTESSIEQGYKAAMRALERFDSYWERAGCVFPRRRVQIDVDVDKCTGCG
                     TCVALAPAVMGLDATRKAFPRTRIVEWSPADGGFVHECPTSAITATNVDRRASQASAT
                     AEQSHDPTPSGAGG"
BASE COUNT          717 a         1738 c         1747 g          807 t
ORIGIN      
        1 gccgtccttg cccgtcgccc cgacggtcag cgtcgtgcgc ggcgcgagcg aggtgtccag
       61 gccctggatg tcgaaggtct cgaagccggt caggccgatc gactggcgcg tctcgccgtt
      121 gatgaactcg agcggcaaca cgcccatccc cacgagattc gagcgatgga tgcgctcgaa
      181 gctctcggcg atgaccgcct tcacgccgag gaggatcgtc cccttggccg cccagtcgcg
      241 cgacgagccg gtgccgtact ccttgccggc cacgatcacg agcggcgtgc cctgcttcgc
      301 gtactccatc gccgcgtcgt agatgaactt cggctgtccg ccgggctcgg tggcggtcca
      361 gccgccctcg gtgccgggcg ccatctcgtt gcgcagccgg atgttggcga aggtgccgcg
      421 catcatcacc tcgtggttgc cgcgacgggc gccgtacgag ttgaagtcct tcttggcgac
      481 gccgtgctcg atgagccatt tgcccgccgg gctcgccgcc ggaatgttgc cggccggcga
      541 gatgtggtcg gtggtgatgg aatcgcccag catcgccagc gccttagcac cgccgatcgg
      601 cttgatgccg ggcggcgtca tcgtcatccc ctcgaagtac ggcggattct tgacgtaggt
      661 cgaatcggac tgccaggcgt aggtctcgcc cttcgggacc ttcagcccct gccagtgcgc
      721 gtcgcccttg aacacgtcgg cgtactggtg cgtgaagaac tccctcttca cgctcttcat
      781 gatctcgtcc tgcacctcga cggcggtcgg ccagatgtcg cgcaggaaca cggggccatc
      841 gctgccgatg ccgaggggct cgcgcgtcag gtccaggtcc atgcggcccg cgagcgcata
      901 cgccacgacc aggggcggcg aggcgaggta attgtagcgc gtgagcggat tgacgcgccc
      961 ctcgaagttg cgattgcccg agagcacgct cgccacgaac agcttgccgt cctcgatcgc
     1021 cttcgcgatc ggatcgggca cggggccgga gttcccgatg caggtcgtgc agccgtagcc
     1081 gacgagattg aacccgagtt tgtcgaggta ctcggtcacg ccggccgcct tgaagtagtc
     1141 ggtgacgacc ttggagcccg gcgcgagcga cgtctgcacc cacggattca cgctcagccc
     1201 cttcttcacc gcgttccgcg ccagcagccc ggccgccagc atgacgcccg ggttggacgt
     1261 gttcgtgcag ctggtgatgg cggcgatcac cacggcgcca tgtcgcaacg tgaagcactg
     1321 cccgttgtag tcgcaggtga cgccttcagg ctgcacgtcg gcgtgcagca cgtcggtgtg
     1381 ctgctgctgc gcgccgcctt cgtcgtcctg ccggatcacc gccttcttca cgtcgggagc
     1441 gagcttcacg gcgtccggct tcgtctgcgt ggccgccgtc gcgagcacgg gcggcgcctg
     1501 cttcgcgaga tcgatcgcca gtgcttccct gtacattgcc gccgccttgc tgagcggcac
     1561 gcggtcctgc gggcggcgcg ggccggcgag gctgggctcg acggtgccga ggtcgagctc
     1621 gagtgagtcg gtgaacaccg gatcgggcgt cgcgtcggtg cggaagaggc cctgcgccct
     1681 ggtgtacgcc tccacgagct gcacgtgctg ctcgctccgc ccgctcaggc ggaggtagcg
     1741 cagcgtctcc tcgtcgaccg ggaagaagcc catcgtcgcc ccgtactcgg gcgccatgtt
     1801 ggcgatcgtc gcgcgatccg ccagcgagag atggctgagc ccagtgccat aaaactcgac
     1861 gaacttcccg acgaccttct tcttgcgcag catctcggtc acggtgagca cgagatcggt
     1921 cgcggtggag ccggcgggca gcttgccgtg cagcttgaac cccacgacct ccgggatgag
     1981 catcgacacc ggctgtccga gcatggccgc ctcggcctcg atgccgccga cgccccagcc
     2041 gagcacgccg aggccattga tcatcgtcgt gtgcgagtcg gtgccgccga gcgagtcgca
     2101 gtaggcctcg tgcgtctcct cgttcacgaa caccgtcttg cccaggtact cgaggttcac
     2161 ctggtggcag atgcccgtgc cgggcggcac gacgcggaag ttgcggaacg cgtcctggcc
     2221 ccagcgcagg aacacgtagc gctccacgtt gcgctcgaac tcgaggtcgg tgttgatgag
     2281 gaaggccgca tcgctgccgt actcgtccac ctggaccgag tggtcgatca cgaggtcgac
     2341 cggctggagc gggttgatgc gctgcgcgtc gccgccgagc gccgcgagcg cgtcgcgcat
     2401 cgcggcgagg tccacgacgg cagggacgcc ggtgaagtcc tgaaggagca cgcgcgcggt
     2461 acggaaggcg atctccttct cgaccttgcc cttcacgtcc cagctcgcca tcgcctcgat
     2521 gtccgcgcgc ttcacgaacg cgtcgtcctc gttccggagc aggttctcga ggaggatctt
     2581 gaggctgaac ggaagcctgt cgctgttgcc cttcgatgcc ttggacagga cgtcgaggcg
     2641 gtagatcgtg tacttcgcgc cggcgacgtc gagggtcgcg cggctgccga acgagttgac
     2701 ggaggtcata gtgcggggtc tctcggtgtt cgccgcagtc ctcggccacg acgaacggtg
     2761 gagaacggag ccactgccgg gcgcggaacc gctcgtcgcg acggccggca ggctgcggag
     2821 aaatctagca cggttgcgcg gacggcgtgt tctcggttga cgatgatggg cccacccgcg
     2881 acgttgcggc gtgtcgaacg ccgctttccc cagtgaccga tccgatgtcg tcgccatcgc
     2941 ggaatggctg atgacgttcg actcgacgag cgggtcggag acgccgctca ctcgtgcgtt
     3001 cggggacgcg ctcgccgcac gcggctgggc gctcgtgcgc atcccggcgc ccgcggggcg
     3061 cgagaacctg ctcgccacgc acggatccgg tccgttcgtc accctgtcga cgcacctgga
     3121 caccgtccca ccctacattc cgccccgccg cgccggcggc cgcctctccg gacgcggtgc
     3181 ctgcgacgcc aaggggatcg cggcggcgat gctgtgcgcg gccgagcggc tacgcgcgga
     3241 cggggtctcc gtggccctgc tgttcgtggt gggcgaggag accacgcacg acggcgcaca
     3301 cgcggccaac gactgggccg tggcgcaggg gttccgcagc ctcgcgctcg tgaacgggga
     3361 gcccaccgag agcacgctgg ccctcggcac caagggcgcg ctgcgcgtcg tggtgcgcac
     3421 cgcgggcgaa gccgcgcact ccgcctaccc gcagctcggc cggtcggcga cgcgcgatct
     3481 ggtgcacctg ctcgccgagc tcgacaccct tcccatgccg cgcgatccgc tgctcggcga
     3541 cacgacgatc aacatcggac gtctggccgg cggggtcgcc gacaacgtgc tggcgcccag
     3601 tgcggaggcg cgcctcatgg cccggctggt gtgccacgcg gatctggtgt gggatcgctt
     3661 gctccagtgg agcgccggtc gcgcgaccct ggagcgcggc atcgaggcgc cgccggtcaa
     3721 gctcgcgacg gtgccgggct atccgacctc cgtcgtggcc ttcgccaccg acatccccgc
     3781 catgccggcg tggggcaccc catacctgtt cggccccggc tcgatccacg tcgcgcatcg
     3841 cgacgacgaa cacgtcgaca cggcggagct cgaggcggcg gtggacgcct acgatcgact
     3901 cgtgcggacc gtggcagtcg ctcgctgagt ggcgcgctgt tcggcgcgcc ggacaccgcc
     3961 gctcagccgc ctgcgccgct cggggtcggg tcgtggctct gctccgcggt ggccgacgcc
     4021 tgcgaagcac ggcggtccac gttcgtcgcc gtgatggcgc tggtggggca ttcgtgcacg
     4081 aacccgccgt ccgccggcga ccactcgacg atgcgcgtgc gcggaaaggc cttccgcgtc
     4141 gcgtcgaggc ccatcaccgc cggggcgagc gcgacacagg tgccgcaccc ggtgcacttg
     4201 tccacgtcca cgtcgatctg cacgcggcgg cgaggaaaga cgcagccggc gcgctcccag
     4261 tacgaatcga accgctcgag cgcccgcatc gcggccttgt agccctgctc gatgctcgat
     4321 tcggtgtcgg tgaagctcag ccagttcgcg tcgttgagcc tgggccggat gaggaccatc
     4381 ggcggcccgt gccagcgctc cagcggaaac tgctgcagcg cgtgcatcat catcgtggcg
     4441 gcgcgcatgt agatggtcgc gaacccctgg ccctcggcgc gcgccgcctg cgacgcgtcg
     4501 gagctgccga cgtcgacggc gatgatgatg tcggcgaagt gcgaggccat cgatacgggc
     4561 aggttgtcca cgacgccgcc atcgatgcag gtccgctcgc ccacgcggcc gggtggaaaa
     4621 aagcccggga gcgcgcacga cgcatagacc gcatcgcgca cggggacctc ctggaggccg
     4681 ggcagccccc acaccacgcg cgcgccctgg tcgaggtcca ccgagttcac gagcaggggc
     4741 ttcgggagct gcgtgaagtc cacgtcggga atcgactgcg ccaccagctc acgcagcggc
     4801 tcctcgagat agatcgaagg cgcgcgcatg cggtcgagca gcatgccgaa gtgattgagg
     4861 cggaagaggt ccttgcgccg cagtgcctgc gcccgctcgg ccagcacatc gaccggggtg
     4921 tcggccaggt gcgcggcggc gatgagcgcg ccgatgctcg tgccggcata gacgtcgggc
     4981 acgatctcgc gttcggcgag cgcgcgcag
//
LOCUS       DASSYW010001189         2041 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1027524, whole genome shotgun sequence.
ACCESSION   DASSYW010001189 DASSYW010000000
VERSION     DASSYW010001189.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2041)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2041)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2041
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1027524"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..381)
                     /locus_tag="VFN38_18735"
     CDS             complement(<1..381)
                     /locus_tag="VFN38_18735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013872.1"
                     /translation="MRFLHTIRARLWVGFGITVVLILGAGVLAGMALQRAGRRSEAIV
                     GEMRQEQESVQQVAYRLLQEVAAGMRYLNTSAESDGARYAALADEADRLRRSTVKLAA
                     LSSAERQKLEELGTLQCTVEVGIGV"
     gene            complement(378..1517)
                     /locus_tag="VFN38_18740"
     CDS             complement(378..1517)
                     /locus_tag="VFN38_18740"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HET9013873.1"
                     /translation="MHPPSRRPLAAAVFRALRLAAPLVVVACTKRAAAGDEIGIAVAL
                     NPQRAGMQSIYNGVQLAVTELNKQYGGQLGSARLVMLKGAADVSDPVRIADAFRQDPR
                     VVGVVGHPESGTTLAAIDEYADTKNDGANGVVAISPTGTSPALTGASRWLFRVCPSDV
                     QSSRAVARFLLDSLHARRASVIYRNDSYGKDWAKSFAETYRAGNGVIVQRDPYLQGAT
                     AWDAYAGYLKQLKPDVLLFPGSQEDALEALRAMRAAGVTTPLIGGDATSGLEANAEEF
                     PDVRYTAFFLARRATSPEAKAFIAAYTAAFKEEPDQRAALAYDAAMLIGRGAIEVGAD
                     RAKIRDYVESIGRDRPPMAGVAGPVSFDANHDALNKPVVIARVGR"
     gene            1700..>2041
                     /locus_tag="VFN38_18745"
     CDS             1700..>2041
                     /locus_tag="VFN38_18745"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0034023 - 5-(carboxyamino)imidazole
                     ribonucleotide mutase activity [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AIR carboxylase family protein"
                     /protein_id="HET9013874.1"
                     /translation="MATRAASPAGSAPAPWVGVIMGSRSDLRVMTHAAELLTALEIPH
                     EVRVVSAHRTPDWMFEYAESAEQRGLEVIIAAAGGAAHLPGMVAAKTVLPVLGVPIPA
                     TMLNGVDALLAI"
BASE COUNT          288 a          742 c          697 g          314 t
ORIGIN      
        1 gacgccgatg ccgacttcca ccgtgcactg cagcgtgccg agctcctcga gcttctgccg
       61 ctccgcgctc gagagcgcgg ccagcttcac cgtgctgcgt cgcaggcggt ccgcctcgtc
      121 ggcgagggcc gcgtagcgtg cgccgtcgga ttccgcgctc gtgttcaggt agcgcatccc
      181 cgccgccact tcctgcagca accggtaggc gacctgctgc acgctctcct gctcctgtcg
      241 catctcgccg acgatggctt cgctgcggcg gcccgcgcgc tgcagcgcca tccccgccag
      301 cacaccggcg cccagaatca gcacgaccgt gatgccgaag ccgacccaga gccgtgcgcg
      361 aatggtgtgg aggaatctca tcgacccacc cgcgcgatca cgaccggctt gttcagcgcg
      421 tcgtggttgg cgtcgaacga gaccgggccg gccacgccgg ccatcggggg ccgatcgcgt
      481 ccgatggact ccacgtagtc ccggatcttc gcgcggtccg ctcccacttc gatcgcgccg
      541 cggccgatca gcatcgccgc gtcgtaggcg agcgccgcgc gctggtcggg ctcttccttg
      601 aacgctgcgg tgtacgcggc gatgaacgcc ttcgcctccg gcgaggtggc gcgccgcgcg
      661 aggaagaacg ccgtgtagcg cacgtccgga aactcctcgg cgttcgcttc gagccccgag
      721 gtcgcgtcgc caccgatgag tggcgtcgtc acgcctgccg cgcgcatggc gcggagcgct
      781 tcgagcgcgt cctcctggct gcccgggaag agaaggacgt cgggcttcaa ctgcttgagg
      841 tagccggcgt aggcgtccca cgccgtcgcg ccctgcagat acggatcgcg ctgcacgatc
      901 acgccgttac cggcacggta cgtctcggcg aaggacttcg cccagtcctt tccgtacgaa
      961 tcgttgcgat agatcacgct cgcccggcgc gcatgcagcg agtccagcag gaatcgcgcg
     1021 acagcgcggc tcgattgcac gtcgctcggg cagacccgga acagccagcg gctcgccccg
     1081 gtcaacgccg ggctcgtgcc cgtgggcgag atcgcgacga caccgttcgc gccgtcgttc
     1141 ttcgtgtcgg cgtactcgtc gatcgccgcg agggtggtgc cgctctcggg atggccgacc
     1201 acacccacca cgcgcgggtc ctggcggaac gcgtcggcga tgcgcacggg atcggacacg
     1261 tcggcggcgc ccttgagcat caccagccgc gccgagccga gttgcccgcc gtactgcttg
     1321 ttcaactcgg tcaccgcgag ctgaacgccg ttgtagatcg actgcatccc ggcgcgctgc
     1381 gggttgagcg ccacggcgat gccgatctcg tcgccggcgg cggcgcgctt cgtacaggcg
     1441 acgacgacga gcggcgccgc gaggcggagc gcgcgaaaga cggcggcggc gaggggccgg
     1501 cgtgagggcg ggtgcattcg tcggggaagg aagaccgtgt tcgtgggccg cgtcgccccc
     1561 gatgacgtgg tgcgcatccg caccggctat tagacgatgg cgcacctcag aagtatcgga
     1621 cgcgagcgct gtgacttgca gcgcgacggc gagtatcgtt cgccccgccg gtccacctcc
     1681 gactctcgcc cgttcgcaca tggccacccg agccgcctcg cccgccggat ccgcccccgc
     1741 tccgtgggtg ggcgtcatca tgggcagtcg cagcgacctg cgcgtcatga cccatgcggc
     1801 ggagctcctc accgcgctcg agatcccgca cgaagtgcgc gtcgtatcgg cccatcgtac
     1861 gcccgactgg atgttcgagt atgccgagag cgccgagcaa cggggcctcg aagtgatcat
     1921 cgccgccgcg ggaggcgccg cgcacctgcc gggcatggtc gccgccaaga cggtgctgcc
     1981 ggtgctcggc gtccccatcc ccgccacgat gctcaacggg gtggacgcgc tgctcgcgat
     2041 c
//
LOCUS       DASSYW010001190         2046 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_548284, whole genome shotgun sequence.
ACCESSION   DASSYW010001190 DASSYW010000000
VERSION     DASSYW010001190.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2046)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2046)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2046
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_548284"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..887
                     /locus_tag="VFN38_18750"
     CDS             <1..887
                     /locus_tag="VFN38_18750"
                     /inference="COORDINATES: protein motif:HMM:NF014234.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="prephenate dehydrogenase"
                     /protein_id="HET9013875.1"
                     /translation="RPGRRDMIPDTRIAVIGLGLMGGSVARALHVRGVRVLGYDRDGT
                     QLDAAMREGVVHERLDSSFAGLASADVVVLALPVDATAALLPCLAPRATSARLIMDLA
                     STKATIVDAAEAAGLGPRFVGAHPLTGSHRSGWGASRASLFEDARIFLCAAPSTAVGT
                     LQLAESFWRELRAGVELLDPTEHDEQMAWRSHPPHLLSSALAITLRDAGVRRSALGPG
                     GRDMTRLAGGTSSMWAPIVRDNAAAIVEALDACESQLHAIRHAILAGDAAATRRFLED
                     ASGWFDGEPERVLTRGRA"
     gene            904..1851
                     /locus_tag="VFN38_18755"
     CDS             904..1851
                     /locus_tag="VFN38_18755"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HET9013876.1"
                     /translation="MISRSSTPALRVAGLRKAFGDVVAVDGLDLTVRSGECFGLLGPN
                     GAGKTTTIEICEGLTTPDSGEVEVLGRRWNGDERALRERLGIQLQETQLAEKLTVHET
                     VRLFRSFYARGRDVDEVIDVVQLGEKRRARVGKLSGGQKQRLALACAIVGDPELLFLD
                     EPTTGLDPQSRRQLWDLIVELRASGRSIVLTTHYMDEAERLCDRVAVVDHGHVIALGT
                     PRELIASLGAEHVVEFTVIGAPEGAPGADALRALNGVMAAREHDGRWTLEVVELARAV
                     PALLAELSRRGLVLGELATHSATLEDVFVSLTGRQLRDV"
     gene            1844..>2046
                     /locus_tag="VFN38_18760"
     CDS             1844..>2046
                     /locus_tag="VFN38_18760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013877.1"
                     /translation="MSDVARDTAQREPLMHDATSARPHWSERSLVQLTLVRFKEFLRE
                     PEAVFWTFAFPVILAFGLGIAFR"
BASE COUNT          265 a          747 c          732 g          302 t
ORIGIN      
        1 cgcgcccagg aagacgcgac atgattcccg acacgcgcat cgccgtgatc ggcctcgggc
       61 tgatgggcgg ctcggtggcg cgtgcgctcc acgtgcgcgg cgtgcgtgtg ctgggctacg
      121 accgcgacgg gacccagctc gacgccgcca tgcgcgaagg ggtcgtgcac gagcggctcg
      181 actcgagctt cgccggcctc gcgtcggccg acgtcgtcgt gctcgcgctc ccggtcgacg
      241 cgacggcggc gctcctcccc tgcctcgcgc cccgcgcgac gtcggcacgg ctcatcatgg
      301 acctcgcgag caccaaggcc accatcgtgg acgcggcgga agccgccgga ctcggccccc
      361 ggttcgtggg ggcacacccg ctcaccggaa gccaccgctc gggatggggc gcgtcacgcg
      421 cctcgctctt cgaggacgcg cgcatctttc tctgcgcggc gccgagcacc gcggtgggga
      481 cgctccagct cgcggagtcg ttctggcgcg agctgcgcgc gggcgtcgag ctgctggacc
      541 cgaccgagca cgacgagcag atggcgtggc ggagccaccc gccccacctg ctgtcgagcg
      601 cgctcgccat cacactgcgc gacgcgggcg tccgccggtc cgcgctcggt cccggcgggc
      661 gcgacatgac ccgcctcgcc ggcggaacct catcgatgtg ggctcccatc gtgcgtgaca
      721 acgcggcggc gatcgtcgag gcgctcgacg cctgcgagtc gcagctgcac gccatccggc
      781 acgcgatcct cgccggcgac gccgccgcga cgcgtcgctt tctcgaggat gcgtccggat
      841 ggttcgacgg cgagcccgag cgggtgctca cgcgcggccg ggcgtgagcc tacttttcgc
      901 gccatgatct cccgttcatc cactccggcc cttcgcgtgg ccgggctgcg caaggcattc
      961 ggagacgtgg tcgccgtgga cgggctcgac ctcaccgtcc gatccggcga gtgcttcggc
     1021 ctcctcggac ccaacggcgc cggcaagacg accacgatcg agatctgcga agggctgacc
     1081 acgccggatt ccggggaggt cgaggtgctc ggccgccgct ggaatggcga cgagcgcgcg
     1141 ctccgcgaac ggctgggcat ccagctccag gaaacgcagc tcgccgagaa gctcaccgtc
     1201 cacgagaccg tgcggctgtt ccgcagcttc tacgcacgcg gccgcgacgt ggacgaggtg
     1261 atcgacgtcg tgcagctcgg cgagaagcgg cgcgcgcgcg tcggcaagct gtccggcggt
     1321 cagaagcagc ggctcgcgct ggcgtgcgcc atcgtcggcg atccggagct gctcttcctc
     1381 gacgagccca cgaccggcct cgacccgcag tcgcgccggc agctgtggga cctgatcgtc
     1441 gagctgcgcg cgagtggccg cagcatcgtg ctcaccacgc actacatgga cgaggccgag
     1501 cggctgtgcg atcgggtcgc cgtcgtggat cacgggcacg tcatcgcgct cggcacgccg
     1561 cgcgagctga tcgcctcgct cggcgccgag cacgtcgtgg agttcaccgt gatcggcgcg
     1621 cccgagggtg cgcccggtgc ggatgcgttg cgtgcgctga acggcgtgat ggcggcgcgc
     1681 gagcacgacg ggcgctggac gctggaagtc gtggagctgg cgcgcgcggt ccccgccctc
     1741 ctggccgagc tgtcgcggcg cggcctcgtg ctcggcgagc tggccacgca ctcggcgacg
     1801 ctcgaggacg tgttcgtctc gctcaccggg aggcagctcc gcgatgtctg acgtcgcccg
     1861 cgacacggcg cagcgcgaac cgttgatgca cgacgccacc agcgcccgcc cccactggtc
     1921 ggagcggtcc ctcgtgcagc tcaccctggt gcggttcaag gaatttctgc gtgagccgga
     1981 ggccgtgttc tggaccttcg ccttcccggt cattctcgcg ttcgggctcg gcatcgcgtt
     2041 tcgcaa
//
LOCUS       DASSYW010001191         2226 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_585003, whole genome shotgun sequence.
ACCESSION   DASSYW010001191 DASSYW010000000
VERSION     DASSYW010001191.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2226)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2226)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2226
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_585003"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..976
                     /gene="prfA"
                     /locus_tag="VFN38_18765"
     CDS             <1..976
                     /gene="prfA"
                     /locus_tag="VFN38_18765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016149 - translation release factor
                     activity, codon specific [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HET9013878.1"
                     /translation="PDTFGDSQKSAELGREHRRLQPVIELAADLEKSENELADARELV
                     SIDDPEMAAEATREVGHLEARLKPALLPHDPLDDRNAIIEIRAGTGGDEAALFAADLY
                     RMYTRYLERAGWRREPISQSEGALGGIKEAVFKVSGDGAFGAMRWESGVHRVQRVPAT
                     ETQGRIHTSAATVAVLPEAEEVDVKIEDKDLRIDVFRSSGPGGQSVNTTDSAVRITHL
                     PSGLVVSQQDQKSQLQNKLKAMEVLRARLLDLRVAEQEAARSKMRKSQVGTGDRSAKI
                     RTYNYPQSRITDHRIGYTTHDLAGVMDGKLQELIDELKMADVEERLGG"
     gene            969..1892
                     /gene="prmC"
                     /locus_tag="VFN38_18770"
     CDS             969..1892
                     /gene="prmC"
                     /locus_tag="VFN38_18770"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: protein motif:HMM:TIGR00536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0018364 - peptidyl-glutamine methylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HET9013879.1"
                     /translation="MADGTMRLDAGEARGSGGRTVGALLVEMAAVLAPSLGADAPREA
                     RDLLAAVHDMPRHWPSTARGELVDDAAWARALGAAVRRARGTPLQYAAGQASFRHLTL
                     DVDDRVLIPRPETELLVELVLRAAAEHDGCAGTVVDVGTGSGAIALAVASEGNFANVI
                     ATDVSLDALAVARANVRRCSDILRCPVELRHGSLLRPVPERGLRAVVSNPPYISHDEA
                     VALPAGVRDWEPAVALFSGGGGMATIAGLVREAAGALAPRGVLALEVDARRASLAAEL
                     IASHGAYDGVRVERDLTGRERFVVARRREER"
     gene            1892..>2226
                     /locus_tag="VFN38_18775"
     CDS             1892..>2226
                     /locus_tag="VFN38_18775"
                     /inference="COORDINATES: protein motif:HMM:NF017902.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlbF family regulator"
                     /protein_id="HET9013880.1"
                     /translation="MIEDKAKELGRLIGQSPEYQAVKRANDALGQDSAAVALLRQMEQ
                     LRMSAQQMLQRGERPTEEMEKELDALLGQVQGQAVYQRLVSAQENFDKTMGKVNDWIV
                     DGIERGAASP"
BASE COUNT          349 a          742 c          847 g          288 t
ORIGIN      
        1 cccggacacc ttcggcgact cgcaaaagag cgccgaactg ggtcgggagc accgacgcct
       61 ccagccggtg atcgagctgg cggccgacct cgagaagtcc gagaacgagc tcgccgacgc
      121 ccgcgagctc gtttccattg acgaccccga gatggcggcc gaagcgactc gcgaggtggg
      181 gcacctcgag gcgcggctga agcctgcgct gctgccgcac gatccgctcg acgaccgcaa
      241 cgccatcatc gagatccgcg ccggcaccgg cggcgacgag gccgcgctgt tcgccgcgga
      301 cctctaccgc atgtacacgc gctacctcga gcgcgcgggc tggcgccgcg agccgatctc
      361 gcagtcggag ggcgcgctgg gcggcatcaa ggaggcggtg ttcaaggtct ccggcgacgg
      421 cgccttcggc gcgatgcgct gggagtccgg cgtgcaccgc gtgcagcgcg tgcccgccac
      481 cgagacgcag gggcgcatcc acacctccgc cgccacggtc gccgtgctcc ccgaggcgga
      541 agaggtggac gtgaagatcg aggacaagga tctgcgcatc gacgtcttcc gctcgagcgg
      601 cccgggcggc cagagcgtga acaccaccga ctccgccgtg cgcatcacgc acctcccgtc
      661 ggggctggtc gtgagccagc aggatcagaa gtcgcagctc cagaacaagc tgaaggcaat
      721 ggaagtcctg cgcgcacggc tgctcgatct ccgggtggcg gagcaggagg ccgcgcggtc
      781 gaagatgcgg aagtcgcagg tgggcacggg cgaccggtcg gccaagatcc gcacctacaa
      841 ctatccgcag agccgcatca ccgaccaccg catcggctac acgacgcacg atctcgcggg
      901 cgtgatggac ggcaagctcc aggagctgat cgacgagctg aagatggccg acgtggagga
      961 gcgactcggt ggctgacggc acgatgcggc tcgacgcggg cgaggcgcgc gggagtggtg
     1021 ggcgcaccgt cggcgcgctc ctggtggaga tggccgcggt gctcgcgccg tcgctcggcg
     1081 cggacgcgcc gcgcgaggcg cgagacctgc tcgctgccgt gcacgacatg ccgcgccact
     1141 ggccgtccac cgcgcgcggc gagctcgtgg acgacgcggc gtgggcgcgg gcactcggcg
     1201 ccgccgtgcg tcgagcgcgg ggcacgccgc tgcagtacgc ggcagggcag gcgtccttcc
     1261 ggcacctgac gctcgacgtc gacgaccgtg tgctgatccc gcgtcccgag acggaactcc
     1321 tcgtggagct ggtgctccgg gccgccgccg agcatgacgg gtgcgccggc accgtggtgg
     1381 acgtcggtac cggatccggc gcgatcgcgc tcgcggtggc gagcgaggga aacttcgcga
     1441 acgtgatcgc gaccgacgtt tcgctcgacg cgctcgccgt ggcgcgggcc aacgtgcggc
     1501 gatgcagcga catcctgcgg tgtccggtgg agttgcggca cggctccctg ctccgacccg
     1561 tgcccgagcg cggtctgcgc gccgtggtgt ccaacccgcc atacatttcg cacgacgagg
     1621 ccgtggcgct gccggctggc gtccgggact gggagccggc ggtggcgctc ttcagcggtg
     1681 gcgggggcat ggccacgatc gccggcctcg tacgggaggc ggcgggtgcg ctcgcgccgc
     1741 gtggcgtgct ggcgctcgag gtggatgcgc gccgcgcgtc gctcgccgcg gagctgatcg
     1801 cctcgcacgg ggcgtacgac ggagttcggg tggagcggga tctcacaggc cgcgagcgct
     1861 tcgtggtcgc cagacgacgg gaggagcggt aatgatcgag gacaaggcga aggagctcgg
     1921 ccggttgatc gggcagagcc ccgagtatca ggcggtcaag cgcgccaacg atgcgctcgg
     1981 acaggattcg gccgcggtgg ccctccttcg gcagatggaa cagctccgga tgagcgcgca
     2041 gcagatgctg cagcgtggcg agcgtcccac cgaggagatg gagaaggagc tggatgccct
     2101 gctcggccag gtgcagggac aggccgtcta ccagcggctc gtgtcggcac aggagaactt
     2161 cgacaagacg atgggcaagg tgaacgactg gatcgtggac ggcatcgagc gcggcgcggc
     2221 cagccc
//
LOCUS       DASSYW010001192         4374 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_953857, whole genome shotgun sequence.
ACCESSION   DASSYW010001192 DASSYW010000000
VERSION     DASSYW010001192.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4374)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4374)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4374
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_953857"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(144..2729)
                     /gene="valS"
                     /locus_tag="VFN38_18780"
     CDS             complement(144..2729)
                     /gene="valS"
                     /locus_tag="VFN38_18780"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: protein motif:HMM:NF009687.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0002161 - aminoacyl-tRNA editing activity
                     [Evidence IEA];
                     GO_function: GO:0004832 - valine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006438 - valyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HET9013881.1"
                     /translation="MSADLPDHPVALPEKPALEGLEDKWNAVWEREGTYRYEPGRPRS
                     EVFSIDTPPPTVSGSLHVGHVFSYTHTDVVARFQRMRGKAVFYPMGWDDNGLPTERRV
                     QNYYGVRCDPSLPYDPSFQAPDKPGKQAISVSRPNFIQLCAQLTAEDEKAFEDLWRHL
                     GLSVDWSRTYATIGKTALRVSQTAFLRLLAKGQAYQLEAPTLWDVDFRTAVAQAELED
                     REQPGAYHRLRFGRADGSFVEIETTRPELLPACVALVAHPDDARYQPLFDTVVMTPLF
                     GVPVPVKAHPLAEPEKGSGIAMICTFGDLTDVVWWRELALPVRAVIQANGALKPVSFG
                     TEAWPSHDAARAQAAYDQLTNLSVTKARTKIAELLRESGDLIGDPRPITHPVKFYEKG
                     DRPLEIITSRQWFIKTMDFREALLARGRELQWHPEYMQHRFENWVNGLSGDWCISRQR
                     FFGVPFPVWYPVREDGSLDYAQPLVPDESRLPIDPSTDVPDGYHADQRDRPGGFSGDP
                     DIMDTWATSSLTPQVAGGWLDNPALFAEVFPMDVRPQAHDIIRTWLFSTVLRAELEHG
                     SLPWYHAAISGWVLDPDRKKMSKSKGNVVTPMGLLQEHGSDGVRYWAASGRPGTDTAF
                     DPAQMKVGRRLAIKLLNASRFALLQAEPRGAITEPLDRGMLTQLARLVGEATESLDAF
                     DYARVLQSTETFFWAFCDDYLEMVKARRYGDFGPEGAASANSALRVALSTMLRLFAPY
                     LPFVTEEVWSWWRPGSVHRASWPAPAEVVASIGGNDANAAQVYEWTRMALADVRRIKA
                     AEKRAVKSVIEQATLSTRFEAVRPAARDFQAATHIRSLAFGDVDAPQLVFAEEPAVKA
                     GESPA"
     gene            complement(2751..3800)
                     /locus_tag="VFN38_18785"
     CDS             complement(2751..3800)
                     /locus_tag="VFN38_18785"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HET9013882.1"
                     /translation="MHKLLLADDSVTIQRVIELTFSGEDIQVVAVNDGEQAIARIPVE
                     QPDIVLADIGMPKKGGYDVAAFVKGRSDLEHIPVLLLAGAFEPVDQARAEQVRCDGVL
                     IKPFEPRQVIERVRELLEGVKGSPAQATADVPRPVERLIPAAAPVEETPQVLESDSLL
                     DEYFESLNAAFDSVGPPPAPATLVDSAPQVADAPRRRGDSLDDYFDRLSNAFEQSKPA
                     EVPHALPDSFEDFIEERRVPTVDALVSASKPSENGSGNLHANGHAAANGLNGHEHARN
                     PIVDALEAMLGVPEPRLSQPTLPGLPEPAHGNGASSNGDLADAVTERVLDRLLPEITA
                     TVQRLVREEVERLRH"
     gene            complement(3800..4201)
                     /locus_tag="VFN38_18790"
     CDS             complement(3800..4201)
                     /locus_tag="VFN38_18790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin B12-binding domain-containing protein"
                     /protein_id="HET9013883.1"
                     /translation="MSRIRVVIAKPGLDGHDRGAKVIARALRDAGMEVIYTGLRQTPE
                     QIVTAALQEDADVIGLSILSGAHMHICPRIVELLREHKMEDVLVVVGGIIPDADVPKL
                     NAIGITGVFQPGTPMQDIVEFIRGRVTAKVE"
BASE COUNT          653 a         1553 c         1448 g          720 t
ORIGIN      
        1 cccggccagc acgcacggcg tcttcgccac gagcactgcc gtggcctgtt ggcgcgaatc
       61 gacggtggcg gccgtcgtca cgtcgccgcg gccgatgtct tcggccagcg cctgccggac
      121 cagttcccgg taggcctcgg cgttcacgcc ggcgactccc cagccttcac ggccggctcc
      181 tcggcaaaca ccagttgcgg cgcgtcgacg tctccgaacg ccagcgatcg gatgtgcgtg
      241 gccgcctgaa agtctcgtgc cgctggccgc accgcctcga accgcgtcga cagtgtggcc
      301 tgctcgatca ccgacttcac cgcgcgcttc tccgccgcct tgatgcggcg aacgtccgcc
      361 agcgccatcc tcgtccactc gtagacctgc gcggcgttcg cgtcgttgcc accgatcgac
      421 gcgaccactt cggcgggcgc cggccacgac gcgcgatgca ccgatcccgg gcgccaccac
      481 gaccacactt cttcggtgac gaacggcaga tacggcgcaa aaaggcgcag catggtcgac
      541 agcgccacgc gcagcgcgct attggcgctc gccgctccct cgggcccgaa gtcgccgtaa
      601 cggcgcgcct tcaccatctc gagatagtcg tcacagaacg cccagaagaa cgtctccgtg
      661 ctctgcagca cgcgcgcgta gtcgaaggcg tcgagcgatt cggtggcctc gcccacgagg
      721 cgcgcgagtt gcgtcagcat gccgcgatcg agcggctcgg taatcgcacc gcgcggctcg
      781 gcctgcagca gcgcgaagcg cgacgcgttg agcagcttga tcgccagccg gcggcccacc
      841 ttcatctgcg ccgggtcgaa cgcggtgtcg gtgccgggcc gtccgctggc ggcccagtag
      901 cgcacgccgt cggagccgtg ttcctgcaac agccccatcg gggtcacgac gttccccttg
      961 gacttcgaca tcttcttgcg atcggggtcg agcacccatc cggagatggc cgcgtgatac
     1021 cacggcaggc tgccgtgctc gagctcggcc cgcagcaccg tgctgaacag ccacgtgcgg
     1081 atgatgtcgt gcgcctgcgg gcgcacgtcc atcggaaaca cttccgcgaa aagtgccgga
     1141 ttgtcgagcc agccgccggc cacctgcggc gtgagcgacg acgtggccca cgtgtccatg
     1201 atgtcgggat cgcccgagaa gccgcccggc cgatcgcgct ggtcggcgtg gtagccgtcg
     1261 ggcacgtcgg ttgacggatc gatcggcagc cgcgattcgt ccggcacgag cggctgcgca
     1321 tagtcgagcg agccgtcctc gcgcaccgga taccagaccg ggaacggcac gccgaagaag
     1381 cgctgccggc tgatgcacca gtcgcccgag agcccgttca cccagttctc gaagcggtgc
     1441 tgcatgtatt ccggatgcca ctgcagctcg cggccgcgcg ccagcagcgc ctcgcggaag
     1501 tccatcgtct tgatgaacca ctgccggctc gtgatgatct cgagcgggcg gtctcccttt
     1561 tcgtagaact tcaccgggtg cgtgatcggc cgcgggtcgc caatcaagtc gcccgactcg
     1621 cgcagcagct cggcgatctt cgtgcgcgcc ttcgtcaccg acaggttggt cagctggtcg
     1681 taggcggcct gcgcgcgcgc cgcgtcgtgc gagggccacg cctcggtgcc gaagctgacc
     1741 ggcttgaggg cgccgttcgc ctggatgacg gcccgcaccg gcagcgccag ctcgcgccac
     1801 cagacgacgt ccgtcaggtc gccgaaggtg cagatcatgg cgatgccgct ccccttctcg
     1861 ggctcggcca gcggatgcgc cttcacgggc acgggcacac cgaacagcgg cgtcatgacg
     1921 acggtgtcga acagcggctg gtagcgggcg tcgtcgggat gcgccacgag cgccacgcac
     1981 gccggcagca gctcggggcg cgtggtctcg atctccacga aggacccgtc ggcgcggccg
     2041 aagcgcagcc gatggtaggc gcccggctgt tcgcggtcct cgagctcggc ctgcgccacc
     2101 gcggtgcgga agtccacgtc ccacagcgtg ggcgcttcga gctgatacgc ctgccctttg
     2161 gccagcaggc gcaggaacgc cgtctgcgac acgcgcagcg ccgtcttgcc gatggtggcg
     2221 taggtgcgcg accagtccac cgacagcccc agatgccgcc acagatcctc gaaggccttc
     2281 tcgtcttccg ccgtcagctg cgcgcacagc tggatgaagt tcggccgcga gaccgagatc
     2341 gcctgcttgc ccggcttgtc aggcgcctgg aacgaggggt cgtacggcag cgacggatcg
     2401 cagcggacgc cgtagtagtt ctgcacccgc cgctcggtgg gcagcccgtt gtcgtcccac
     2461 cccatcggat agaacacggc cttgccgcgc atccgctgga agcgcgccac gacatcggtg
     2521 tgcgtatagg agaagacgtg gccgacgtgc agcgatccgc tcaccgtcgg cggcggcgtg
     2581 tcgattgaga acacctcgga acgcggccgc ccgggctcgt agcggtacgt gccttcgcgc
     2641 tcccagacgg cgttccactt gtcttcgagc ccttcgaggg cgggcttctc ggggagtgcg
     2701 accgggtggt cgggcagatc ggcggacatc ccccaattgt agtcggggcg ttaatggcga
     2761 agccgctcga cctcttcgcg gacgagccgc tgcaccgtgg cggtgatctc cggcagcagt
     2821 cgatcgagca cgcgttccgt gacggcgtcg gccagatccc cgttggatga ggcgccgttg
     2881 ccgtgggcgg gttccggcag cccgggcagc gtgggctgcg acagcctggg ctcgggcacg
     2941 ccgagcatcg cttcgagcgc gtccacgatc ggattgcgtg cgtgctcgtg cccgttcagc
     3001 ccgttggccg ccgcgtgacc gttcgcgtga agattgccgc tgccgttttc ggacggcttg
     3061 gaggcgctga cgagcgcatc gacggtgggc acccgccgtt cctcgatgaa gtcctcgaag
     3121 ctgtcgggca gcgcgtgcgg cacttccgcc ggcttggact gctcgaaggc gttgctgagg
     3181 cgatcgaagt agtcgtccag cgaatcgccg cgccggcgcg gcgcgtccgc gacctgcggc
     3241 gccgagtcca cgagcgtcgc tggcgccggg ggcgggccca cgctgtcgaa cgcggcgttg
     3301 aggctttcga agtattcgtc gagcagcgag tcgctttcga gcacctgcgg tgtctcctcg
     3361 accggcgcgg cggctgggat gaggcgttcc accggacgcg gcacgtcggc cgtggcctgc
     3421 gccgggctcc ccttcacgcc ttcgagcagc tcgcgcacgc gctcgatgac ctgccgcggc
     3481 tcgaacggct tgatcagcac gccgtcgcag cgcacctgct cggcgcgcgc ctggtccacc
     3541 ggctcgaatg cgcccgcaag gagcagcacg ggaatgtgct cgagatcgct gcgccccttc
     3601 acgaacgccg cgacgtcgta gccgcccttc ttcggcatac cgatgtcggc caggacgatg
     3661 tcgggctgct cgaccggaat gcgggcaatg gcctgctcgc cgtcgttgac ggcgacgacc
     3721 tggatgtcct cgcccgaaaa cgtcagctcg atgacgcgct gaatcgtcac gctgtcgtcg
     3781 gccagcagaa gtttgtgcat cactcgacct tcgcggtcac gcggccgcga atgaactcca
     3841 cgatgtcctg catcggcgtt cccggctgaa acacgccggt gatgccgatc gcgttcagct
     3901 tcggcacgtc ggcgtcggga atgatcccgc cgaccaccac caggacatcc tccattttgt
     3961 gctcgcgcag cagttccacg atgcgcgggc agatgtgcat gtgggccccg gacaggatcg
     4021 acaagccgat cacgtccgcg tcctcttgca gcgcggccgt cacgatctgc tccggcgtct
     4081 gccgcaagcc cgtgtagatg acctccattc cggcgtcgcg caacgcccgg gcgatgactt
     4141 tcgcgccccg gtcgtggccg tcgagccccg gtttggctat gaccacccga atccggctca
     4201 tgccgggcaa tccccctaag ttacgctcaa aagcccagct tcacaccatt gcccacaggc
     4261 gcaagcaccc cgcgcctcca cgcttcttca cacgccgact cgctagatta tcgggacttc
     4321 ggtgtattcg ccccagacct ctctcagagc gtcgcacatt tccccgacgg tggc
//
LOCUS       DASSYW010001193         2835 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_349634, whole genome shotgun sequence.
ACCESSION   DASSYW010001193 DASSYW010000000
VERSION     DASSYW010001193.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2835)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2835)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2835
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_349634"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..748
                     /locus_tag="VFN38_18795"
     CDS             <1..748
                     /locus_tag="VFN38_18795"
                     /inference="COORDINATES: protein motif:HMM:NF013254.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004637 - phosphoribosylamine-glycine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0009113 - purine nucleobase biosynthetic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="phosphoribosylglycinamide synthetase C
                     domain-containing protein"
                     /protein_id="HET9013884.1"
                     /translation="SVFAITDGTGFVMLPGLQDHKRLLDGDRGPNTGGMGAYVPVSLG
                     ARPDDAAPAGDLGAAARAIFRGTLDAMTQRGRPFTGLLYAGLMLTRDGPRVVEFNCRF
                     GDPETQALMPVLELRPGLLELMLLVARQLPLTAAEAGLRGACVTTVLAAAGYPDTPRS
                     GDVIGLPPAEEGVTVFHAGTARDAQGRLVTAGGRVLAVSAAAPTIADAQRASLDYARR
                     VAFAGAQLRSDIGWREIARRRPASARASRD"
     gene            726..1553
                     /gene="mutM"
                     /locus_tag="VFN38_18800"
     CDS             726..1553
                     /gene="mutM"
                     /locus_tag="VFN38_18800"
                     /EC_number="3.2.2.23"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: protein motif:HMM:NF002211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0008534 - oxidized purine nucleobase
                     lesion DNA N-glycosylase activity [Evidence IEA];
                     GO_function: GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA];
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA-formamidopyrimidine
                     glycosylase/DNA-(apurinic or apyrimidinic site) lyase"
                     /protein_id="HET9013885.1"
                     /translation="MPELPETETIARDLDREIRGRTIGDVVVRRADVLREVDAAALAG
                     RVRGATIARCWRRAKLVVLDLDTGDRIVVQPRFTGALLLSRGALPEREAAYSTLHFAL
                     DDGRDLHYRDIRRLGTVTVMDAGRFDAYSGGLGIEPLDPGFSDAHLSVLLRGSRQAVK
                     KVLMDQRVLVGVGNIYANEACWRAGVDPSRQARTLEPDDVARLHAGITSVLAESIAAR
                     GTSFRDYRDASGGRGDFERSLAVYGRGGEPCRRCGARLVETHAIDGRTTVLCAGCQR"
     gene            1532..2725
                     /locus_tag="VFN38_18805"
     CDS             1532..2725
                     /locus_tag="VFN38_18805"
                     /inference="COORDINATES: protein motif:HMM:NF013691.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HET9013886.1"
                     /translation="MRRLSKVKALLLTPKSTDAHVATMRAHVRATAKDRPGVYRWLSA
                     DGEVVYVGKSKRLRTRLLSYFRCGSEEKGSRIVREATSIEWEYAPSEFAALLEELRLI
                     KRFRPRLNVAMKRDARNFCFIKLTRGAAPKLLVVRGAGADDAQIYYGPFNGAQRVTEA
                     VRELNDALGLRDCRLDQPMHFADQPELFQIFPRTPGCIRHEIRKCLGPCVGGCTTAEY
                     DQRVALVRAFLDGADDGPLEMLRAEMEGASAALEFERAAVLRDKLARLEGLREQFIRF
                     RFAVETLSFVYTVPGHEGDDRVYLIRRGRVRGECALPRTEHDRMRLLAMVEDVFSPAE
                     RETTQLPSHEVDELLLLSSWFRRFPAELARSRQSAEFVAAPPALGYDAASDPLFGDSA
                     ASPAA"
BASE COUNT          378 a         1013 c         1036 g          408 t
ORIGIN      
        1 ctcggtgttc gccatcaccg acggcaccgg cttcgtgatg ctccccgggc tccaggatca
       61 caagcggctg ctggacggcg accgtggacc caacacgggg gggatggggg cctatgtgcc
      121 cgtctcgctg ggagcgcgcc ccgacgacgc cgccccggcc ggggacctcg gggccgcggc
      181 gcgagcgatc ttccgcggca ccctggacgc catgacgcag cgtggacgtc ccttcacggg
      241 gctcctctac gccggactga tgctgacgcg cgacgggcca cgcgtcgtcg agttcaactg
      301 ccgcttcggc gacccggaga cccaggcgct catgccggtg ctggagctcc ggcccggcct
      361 attggagctg atgctcctgg tggcgcggca gctccccctg acggccgcgg aggcggggct
      421 ccggggggcg tgcgtcacca ccgtgctggc cgctgcggga tatccggaca cgcctcgcag
      481 cggcgacgtc atcggcctgc caccggccga ggagggggtt accgtcttcc acgccgggac
      541 ggcgcgcgat gcgcaggggc ggctcgtcac cgccggcggc cgcgtgctcg cggtgagcgc
      601 cgcggccccg acgatcgccg atgcccagcg ggcgagcctc gactacgcgc ggcgcgtggc
      661 gttcgccggc gctcagctcc gttccgacat cggctggcgc gagatcgcgc gccggcggcc
      721 ggcgagtgcc agagcttccc gagactgaga cgatcgcccg cgatctcgat cgcgagatcc
      781 ggggacgcac gatcggcgac gtcgtcgttc ggcgcgcgga cgtgctgcgc gaggtggacg
      841 ccgccgcgct cgcggggcgc gtacgcgggg cgaccatcgc ccgctgctgg cgccgcgcca
      901 agctcgtcgt cctggatctc gatacgggcg accggatcgt cgtgcagcct cgattcaccg
      961 gcgccctgct gctcagccgg ggcgccctgc ccgagcgcga ggcggcctac tccaccctgc
     1021 acttcgcgct ggacgacggc cgcgacctcc actaccgcga catccgccgg ctgggcaccg
     1081 tcaccgtcat ggatgcgggg cgcttcgacg cctacagcgg cgggctcggc atcgagcccc
     1141 ttgacccggg cttttccgac gcgcatctat cggtgcttct tcgggggtcg agacaggcgg
     1201 tgaagaaggt gctcatggac cagcgggtgc tcgtcggggt cggcaacatc tacgcgaacg
     1261 aggcctgctg gcgcgccggg gtcgatcctt cccgacaggc ccgcaccctc gagccggacg
     1321 acgtcgcccg gctgcacgcg gggatcacca gcgtgctcgc cgagtccatc gccgcgcggg
     1381 gcacgtcgtt ccgcgactat cgagacgctt cgggaggacg cggcgacttc gagcgctccc
     1441 tcgcggtcta tggacgaggg ggcgagccct gccgccggtg cggtgcccgc ctggtggaga
     1501 ctcacgcgat cgacggacgg accacggtgc tgtgcgcagg ctgtcaaagg taaaggccct
     1561 tctcctcacg ccgaagagca cggacgcgca cgtcgccacg atgcgcgccc acgtccgtgc
     1621 gacggcgaag gaccggcccg gcgtgtaccg ctggctctcc gccgacggcg aggtcgtgta
     1681 cgtggggaag tcgaagcggc tccgcacgcg cctcctcagc tacttccgct gcgggtcgga
     1741 ggagaagggg tcgcgcatcg tgcgcgaggc gacgagcatc gagtgggagt acgcgccgag
     1801 cgagttcgcc gcgctgctgg aggagctgcg gctgatcaag cggttccggc cgcggctgaa
     1861 cgtggccatg aagcgcgacg cccggaattt ctgcttcatc aagctcacgc gcggcgcggc
     1921 gcccaagctg ctcgtggtgc gcggcgccgg cgccgacgac gcacagatct actacgggcc
     1981 gttcaacggc gcgcagcgcg tgaccgaggc ggtgcgcgag ctgaacgacg cgctcggcct
     2041 gcgcgactgc cggctcgacc agccgatgca cttcgccgac cagcccgagc tcttccagat
     2101 cttcccgcgc acgccaggct gcatccgcca cgagatcagg aagtgcctcg gcccctgcgt
     2161 cggcggctgt acgacggccg agtacgacca gcgcgtcgca ctcgtgcgcg cgttcctcga
     2221 cggcgccgac gacggcccgc tggagatgct gcgcgccgag atggaggggg cgagcgcggc
     2281 gctcgagttc gagcgggcgg ccgtgctgcg cgacaagctg gcgcggctcg agggactgcg
     2341 cgagcagttc atcaggttcc gcttcgcggt ggagacgctc tcgttcgtgt acacggtgcc
     2401 cggccacgag ggcgacgatc gcgtctatct catccgccgc ggccgcgtgc gcggcgagtg
     2461 cgcgctgccg cgcaccgagc acgaccggat gcgcctgctc gcgatggtgg aagacgtgtt
     2521 cagcccggcg gaacgcgaga cgacgcagct gccgtcgcac gaagtggacg agctgctgct
     2581 gctctcgtcg tggtttcgcc gctttcccgc cgagctcgcg cgctcgcgtc agtctgccga
     2641 gttcgtcgcg gcgccccccg cgctcggcta cgatgccgcc agcgatccgt tgttcggcga
     2701 ttccgccgcg tcgccggccg cgtagcgcgg cgcggcgcgg cgcacgacgc gaacgttggc
     2761 gaggctcttg caaccagtgg ccgatgcagc ccgatggacg ggtggcagtg gcccggcact
     2821 aatgacgacc tcgtg
//
LOCUS       DASSYW010001194         2946 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1639466, whole genome shotgun sequence.
ACCESSION   DASSYW010001194 DASSYW010000000
VERSION     DASSYW010001194.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2946)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2946)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2946
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1639466"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..470)
                     /locus_tag="VFN38_18810"
     CDS             complement(<1..470)
                     /locus_tag="VFN38_18810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013887.1"
                     /translation="MVDKDETTEETPAAPAAPAPRRGPGHRGADMRDTVAEMAERAQL
                     ISQEAGSKVSAAMKDVISAAAGLAGFAIESARDLVQYMVRRGQMTADEAEKLIREAEA
                     VHAKRPKAERDRIAAEKLAAEKRAAEKKAAMLAAETAPPVHRPVAPGRLLAQGAG"
     gene            725..1828
                     /locus_tag="VFN38_18815"
     CDS             725..1828
                     /locus_tag="VFN38_18815"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HET9013888.1"
                     /translation="MLTGLKILDLSRVLAGPLCTMMLGDMGASVLKVERAGTGDETRG
                     WGPPFDARGDSAYYLSVNRNKLGLAADLDSEPDVELLRALAAEADVVVENFRPDALDR
                     RGLGAGALRAANPSLVWCTISGFGAGSVRPGYDFVVQAESGWMSITGEPDGAPMKHGI
                     ALADVLAGKDAALAILGALVARARTGEGRHLHVSLEGSAEAALVNVAQNALVSGAPPS
                     RWGNAHANLVPYQLFDAADRPLVIAVGNDAQWLACAAALGLDALATEPALRTNAGRLA
                     QRDRVVRQITNRVRERPASEWLDRLAAAGVPCGVVRSVPEVLASAEGSALTGMPPSVP
                     GSVRLPPPRLGEHSALVRARGWNAFADVERERR"
     gene            1890..2531
                     /locus_tag="VFN38_18820"
     CDS             1890..2531
                     /locus_tag="VFN38_18820"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HET9013889.1"
                     /translation="MATRIGKSGGAGTLSRARNTRYSIVVRTTEPEQLVDQDDSDQRI
                     IQRVLAGNRDDFTMLITRYSDPLYRHALCMTGSPDVAEDILQLSFIKAYQHLAEVRGR
                     FDAWVFRIVANGCKDWLKNIRRSHLSYDEDDQPSGFATPEEELDRTELRSDLDVALSS
                     LPASLREAFVMKHVEGRSYEEMADLLGTTVGALKMRVHRAREALQALLEEKYA"
     gene            2531..>2946
                     /locus_tag="VFN38_18825"
     CDS             2531..>2946
                     /locus_tag="VFN38_18825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013890.1"
                     /translation="MRDDLHSDGLDDGRRRERPEQPGRPLADREVPLGPPRSTIADAV
                     HAWLDGDATESQARRGGAGREVDFWKRLDEDLAVRRRLRTPAYLPTQIMNALPMHAPT
                     LITPWWRREFVVTPSNAIVVATTLVVMAAAATALVFR"
BASE COUNT          407 a         1032 c         1048 g          459 t
ORIGIN      
        1 cccgcgccct gcgcgagcag gcgtcccggc gcgacggggc gatgcaccgg gggcgcagtc
       61 tccgcggcga gcatggcggc cttcttttcc gccgcgcgct tctcggccgc gagcttttcc
      121 gccgcgatgc ggtcccgctc cgccttcgga cgcttggcgt gcacggcctc ggcttcacgg
      181 atcagcttct ccgcttcgtc cgccgtcatc tggccgcggc gcaccatgta ctgcacgagg
      241 tcgcgggcgc tctcgatggc gaagccggcc aggcccgcgg cggcgctgat cacgtccttc
      301 atggcggccg acaccttgct ccccgcctcc tggctgatca gctgagcgcg ctcagccatc
      361 tccgccaccg tgtcgcgcat gtccgcgccg cgatggccgg gtccgcggcg tggggctggc
      421 gcggcaggag cggccggcgt ctcctcggtc gtctcgtcct tgtccaccat gtcccggtcc
      481 gttccgatgc tccaggggag gggctccccg tttcattgaa ggccgcgcgg cgacgcgcta
      541 acttggccgc cgcgccgtta ggctcggttg tggcggcaag tatatgattt ttcaacagct
      601 acgcaaggtt cgatcacgcg ccgcgcgagc ctttttcccc gctcccgccc ctgcgcgcag
      661 cagtgggact gggcgcacgc gcggatttat ccgctacatc atggcagcac aacaaggaca
      721 tcaaatgctc accggactca agatactcga tctgagccga gtgctggcgg gaccgctgtg
      781 caccatgatg ctgggagaca tgggcgcctc cgtcctcaag gtggagcgcg ctgggaccgg
      841 cgacgagacc cgtggctggg gcccgccctt cgacgcgcgc ggcgacagtg cctactatct
      901 gagtgtcaac cggaacaagc tggggctcgc cgcggacctg gacagcgagc cggacgtgga
      961 gttgctgcgg gcgctcgccg ccgaggccga cgtcgtggtg gagaacttcc ggccggacgc
     1021 gctggatcgg cgcgggctcg gcgcgggcgc gctccgggcc gcgaacccgt cgctcgtgtg
     1081 gtgcacgatc agcggcttcg gggccggctc cgtgcgcccg ggctacgact tcgtggtgca
     1141 ggccgagagc ggctggatgt cgatcaccgg tgagcccgac ggcgcgccga tgaagcacgg
     1201 gatcgccctc gccgacgtcc tcgccgggaa ggacgcggcc ctcgccatcc tcggcgcgct
     1261 cgtcgcgcgc gcgagaacgg gggaagggcg gcacctgcac gtctcgctcg aaggaagcgc
     1321 ggaggcggcg ctggtgaacg tcgcgcagaa tgcgctcgtc tccggtgcgc cgccctcgcg
     1381 atggggaaac gcccacgcga acctggtgcc ctatcagctc ttcgacgcgg ccgatcggcc
     1441 gctggtgatc gccgtcggca acgacgcgca gtggctcgcc tgcgccgcgg cgctcgggct
     1501 cgacgcgctg gccaccgaac ccgccctgcg cacgaacgcg ggccgcctgg cccagcgcga
     1561 tcgcgttgtg cggcagatca ccaaccgggt ccgcgagcgc cccgcgtcgg agtggctgga
     1621 ccggctcgcg gcggccggcg tgccgtgcgg cgtggtgcgc tcggtgccgg aggtgctggc
     1681 gtctgccgag ggatcggcgc tcaccggcat gccccccagc gtgccgggct ccgtgcggct
     1741 gcccccgccc cgccttggcg agcactccgc gctcgtgcgc gcccgggggt ggaacgcctt
     1801 cgccgacgtg gagcgcgagc gtcggtgagg ggggattccg agggcgcgcg ccgctgttac
     1861 gggggcccgc gacgactcgt ctttcgcacg tggcgacccg gatcggaaaa tctggcgggg
     1921 cgggtaccct gtcccgcgcg cgaaatacgc gttactctat cgtcgtgagg acgacggagc
     1981 cagaacagct cgttgatcag gacgactctg atcagcgcat catccagcgc gtgctcgcgg
     2041 gaaaccgcga cgatttcacc atgctgatca ctcgctacag tgatccgctg tatcgtcacg
     2101 cgctctgcat gacgggaagc ccggatgtcg cggaagacat cctgcagctg tccttcatca
     2161 aggcctacca gcacctcgcg gaagtgcgag gccgcttcga cgcctgggtg ttcaggatcg
     2221 tggcgaacgg ctgcaaggac tggctgaaga acatccgccg ctcccatctc agctacgacg
     2281 aggacgatca gccctcgggg ttcgcgacgc cggaggagga gctggaccgg acggagctcc
     2341 gcagcgacct ggacgtggcc ctgtcatcgc tgccggcctc gctgcgcgag gccttcgtga
     2401 tgaagcacgt cgaggggcgc tcgtacgagg agatggcaga ccttctgggc acaacggtcg
     2461 gtgcgttgaa gatgcgcgtc catcgcgctc gggaagcgct ccaggcctta ctcgaggaga
     2521 aatacgcgtg atgcgtgatg accttcattc cgatggcctg gacgacggcc gcaggcggga
     2581 gcgcccggaa cagccggggc gtccgctcgc cgatcgcgag gtgccgctcg gcccgccgcg
     2641 ctcgacgatc gccgatgcgg tgcatgcgtg gctcgacggc gacgccaccg agagccaggc
     2701 gcgccgcggc ggcgccggcc gggaagtgga cttctggaag cggctcgacg aggatctggc
     2761 ggtgcgccgc cggctccgca cccccgcgta cctgccgacg cagatcatga acgcgctgcc
     2821 gatgcacgcg cccaccctca tcacgccctg gtggcggcgc gagttcgtgg tcacgccgtc
     2881 gaacgcgatc gtcgtcgcca ccaccctcgt ggtgatggcg gcggcggcga ccgccctggt
     2941 cttccg
//
LOCUS       DASSYW010001195         2990 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1234247, whole genome shotgun sequence.
ACCESSION   DASSYW010001195 DASSYW010000000
VERSION     DASSYW010001195.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2990)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2990)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2990
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1234247"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1110)
                     /locus_tag="VFN38_18830"
     CDS             complement(<1..1110)
                     /locus_tag="VFN38_18830"
                     /inference="COORDINATES: protein motif:HMM:NF012589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FGGY family carbohydrate kinase"
                     /protein_id="HET9013891.1"
                     /translation="MAPDGALYLGLDSSTQSLSAVLLEASSGGHRVVFELSLPFDTTL
                     RHYGTRHGVLPSSNPSIAQSSPVMWAEALETIFARMGEQRVDLSRLTAISGSAQQHGS
                     VYFNDAAGRGLEALHTGRPLAPQIVTLLSRPISPIWMDSSTAAECREIEAAVGGERVL
                     AQHTGSRAFERFTGPQIRRFATHEPEAYAATDRIHLVSSYLASVLVGRHAPVDPGDGA
                     GMNLMDLASRQWWPPAVDATAPGLREKLPAIAPSSSIAGRLSPYWRARYRLPNAKVVV
                     WSGDNPCSLIGLGLVREGQVGVSLGTSDTIFGPMRTPRVDPGGTGHVFGAPTGEFMGI
                     TVFSNGSLARERVRDRYGLTWEAFSRALDATPPGNG"
     gene            complement(1110..2261)
                     /gene="xylA"
                     /locus_tag="VFN38_18835"
     CDS             complement(1110..2261)
                     /gene="xylA"
                     /locus_tag="VFN38_18835"
                     /EC_number="5.3.1.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR02631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009045 - xylose isomerase activity
                     [Evidence IEA];
                     GO_process: GO:0042732 - D-xylose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xylose isomerase"
                     /protein_id="HET9013892.1"
                     /translation="MSLTPTPADKFTFGLWTVGNRGRDPFGDFVRPPLDPVTAVHRLG
                     ELGASGVNFHDDDLVPIDATAAERDRIVRDFRAALDATGMTVPMATTNLFTEPAFKDG
                     AFTSHDAGVRRYAVQKTMRAMDLGVELGAHTYVFWGGREGAEVDAGKDPIDAIKRFRD
                     AVDYLCDYARDQRYGLRFALEAKPNEPRGDIYFPTTAACLGFINTLAHPDMVGVNPEF
                     AHEQMAGLSFFHAVAQALEAGKLFHIDLNDQKPGRFDQDLRFGSESIKPLFFLVKLLE
                     ERGYDGPRHFDAHAYRTEDEAGVWDFARGCMRTYLILKTKAQAFAAHAGIQSLLAEIR
                     GAGGELGPYSRQSASALKAVTFDRHALASRRLAYERLDQLVIDLLLGAA"
     gene            complement(2306..>2990)
                     /locus_tag="VFN38_18840"
     CDS             complement(2306..>2990)
                     /locus_tag="VFN38_18840"
                     /inference="COORDINATES: protein motif:HMM:NF019120.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013893.1"
                     /translation="SAALADEWLRMTFTNDAAFVEPVKAMMLTSRQAAVDYMTPLGLT
                     HLMARGHHYGPGPWVNNTGRADQNSTYFHRADAAGIGFDRTAGGSNAVAQYAAPWRDT
                     FGRLDRVPDDYLLWFHHVPWDYRMASGRTLWNELTARYCRGVEAVGAMRATWASLAGR
                     IDAGRYEETRAFLAIQEEEARWWRDATVLYFQTFSKQPIAPDACGAPARTLAEYQSIV
                     SRNVPGGGN"
BASE COUNT          455 a         1016 c         1066 g          453 t
ORIGIN      
        1 gccgttgccc ggcggcgtgg cgtcgagcgc ccgtgagaac gcctcccacg tgagaccgta
       61 tcgatcgcgg acgcgctcgc gcgcgagcga cccattgctg aacaccgtga tgcccatgaa
      121 ctcgccggtc ggcgcgccga acacgtggcc cgtgccgcca gggtcgactc gcggcgtgcg
      181 catcggtccg aagatggtgt cgctcgtgcc gagcgacacg ccgacttgcc cttcccgcac
      241 gagacccagg ccgatcaggc tgcacgggtt gtcgcccgac cacacgacca ccttggcgtt
      301 cggcaggcga tagcgcgcgc gccagtaggg tgacagccgc ccggcgatcg acgacgacgg
      361 cgcgatggcc ggaagtttct cgcgcaggcc tggcgctgtc gcgtctaccg ccggcggcca
      421 ccactggcgc gacgcgagat ccatcaggtt catgccggcg ccgtcgcccg gatcgaccgg
      481 cgcatgacgg cccacgagca ccgacgcgag gtaggagctc acgagatgga tgcggtccgt
      541 ggccgcgtac gcctccggct cgtgcgtggc gaagcggcga atctgcggcc ccgtgaaccg
      601 ctcgaacgcg cgcgagccgg tgtgctgcgc cagcacgcgc tcgccgccca ccgccgcttc
      661 gatctcgcgg cattcggcgg ccgtgctcga gtccatccag atcggcgaga tcggccgcga
      721 cagcagcgtg acgatctgcg gcgccagcgg gcgcccggtg tgcagcgcct cgagcccgcg
      781 gccggccgcg tcgttgaaat acacgctgcc gtgctgctgc gccgagcccg agatggccgt
      841 gaggcggctc aggtccacgc gctgttcgcc catgcgggcg aagatcgtct cgagtgcttc
      901 ggcccacatc accggcgacg actgggcgat ggacgggttg ctgctcggta gcacgccgtg
      961 ccgcgtgccg tagtggcgca gcgtggtgtc gaacggcagc gacagctcga agacgacgcg
     1021 gtgcccgccg ctcgacgctt cgaggagtac ggcgctcagg ctttgcgtgc tggagtcgag
     1081 ccccaggtag agcgcgccgt cgggcgccat caggcggctc cgaggaggag atcgatcacg
     1141 agctggtcga gccgctcgta ggccagacgc cgcgaggcga gcgcgtggcg atcgaacgtt
     1201 acggctttca gcgccgatgc ggactggcgc gaatacggcc ccagttcccc gccggcgccg
     1261 cggatctcgg cgagcagcga ctggatgccg gcgtgcgcgg caaacgcctg cgccttcgtc
     1321 ttgaggatca ggtaggtgcg catgcagccg cgcgcgaagt cccacacgcc ggcctcgtcc
     1381 tccgtgcggt aggcgtgcgc gtcgaaatgg cgcggcccgt cgtagccccg ctcctcgagt
     1441 agtttgacca ggaagaacag cggtttgatc gactcggatc cgaagcgcag atcctggtcg
     1501 aaccgccccg gcttctgatc gttgagatcg atgtgaaaga gcttgcccgc ctcgagcgcc
     1561 tgcgcgacgg cgtgaaagaa gctgagcccg gccatctgct cgtgggcgaa ctcggggttg
     1621 acccccacca tgtcgggatg cgcgagcgtg ttgatgaagc cgaggcaggc ggcggtggtg
     1681 gggaagtaga tgtcgccgcg cggctcgttc ggcttggcct cgagcgcgaa gcgcaggccg
     1741 tagcgctgat cgcgcgcgta gtcgcacaga taatcgacgg cgtcacggaa gcgcttgatc
     1801 gcgtcgatcg ggtccttgcc ggcgtccacc tccgcgccct cgcggccgcc ccagaacacg
     1861 taagtgtggg cccccagctc tacgccaagg tccattgccc gcatcgtctt ctgcacggcg
     1921 tagcggcgca cgcccgcgtc gtgcgaggtg aaggcgccgt ccttgaacgc cggttccgtg
     1981 aagagattgg tggtggccat cggcaccgtc atgccggtgg cgtcgagcgc agcccggaaa
     2041 tcgcgcacga tgcggtcccg ctcggcggcg gtggcgtcga tcggaacgag atcgtcgtcg
     2101 tggaagttca cgccagaagc gccgagctcg ccaagccgat gcaccgccgt gacgggatcg
     2161 agcggcgggc gcacgaagtc gccgaacgga tcgcggccgc gattgccgac ggtccagagg
     2221 ccgaaggtga acttgtctgc cggagtggga gtcagcgaca tgcgagggtc atccagtcga
     2281 gcgtcgtcac ggcggggcat tctactcagt tcccgccgcc cgggacgttg cgcgacacga
     2341 tcgactggta ctccgcaagg gttcgcgccg gggcgccgca ggcgtcgggc gcgatcggct
     2401 gcttcgagaa cgtctggaag tagaggacgg tggcgtcgcg ccaccagcgc gcctcctcct
     2461 cctgaatggc gagaaacgcc cgcgtttcct cgtagcgtcc ggcgtcgatc cgcccggcca
     2521 gcgacgccca cgtggcgcgc atggcgccca ccgcttcgac gccgcggcaa tagcgcgccg
     2581 tcagctcgtt ccagagcgtc cggcccgacg ccatccggta gtcccacggc acgtggtgga
     2641 accagagcag gtagtcgtcc ggcacccggt ccaggcgtcc aaacgtgtcg cgccatggag
     2701 ccgcgtactg cgcgacggcg ttgctgccac ccgccgtgcg gtcgaacccg atgccggcgg
     2761 catcggcgcg atggaagtag gtggagttct ggtccgcccg ccccgtgttg ttcacccacg
     2821 ggccgggacc gtagtgatgg cctcgcgcca tcaggtgggt gaggccgagc ggcgtcatgt
     2881 agtccaccgc ggcctgtcgt gaggtcagca tcatcgcctt gaccggctcg acgaacgccg
     2941 cgtcgttggt gaacgtcatg cggagccatt cgtcggccag cgcggcggac
//
LOCUS       DASSYW010001196         2198 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1138128, whole genome shotgun sequence.
ACCESSION   DASSYW010001196 DASSYW010000000
VERSION     DASSYW010001196.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2198)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2198)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2198
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1138128"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1984)
                     /locus_tag="VFN38_18845"
     CDS             complement(<1..1984)
                     /locus_tag="VFN38_18845"
                     /inference="COORDINATES: protein motif:HMM:NF013126.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 3 C-terminal
                     domain-containing protein"
                     /protein_id="HET9013894.1"
                     /translation="MAPIKRFAAACAAASVVVLLALAPAAGAAGRCGQHPWCDTTLSP
                     DRRAELVLAELTLPEKQQLLWGDEQFGVANPPGSQFHTGTNYGVPRVDVPTLYFSDGP
                     VGPRQGAGATSMPAPLGLAASFDPALARAAGELVADEVKAKGNDVVFAPTVNIMRTPR
                     AGRTFEAYGEDTYLAARQAVGWIKGAQSRGVIAEVKHYAANNQEKDRMQIDERIDERT
                     LREVYLPQFEAAVKEGGSGTVMCAYNQVNSQFACENTHLLMDILKREWGFPGFVVADY
                     PAGHDTAASLKNGLDFEPFGFSYSPTNTTQALVTGKASEADVNEHVRRILRTMFAFGV
                     FDREGYRNDDAQIPVDAHALEAQHIEEGGITLLRNRHNVLPLRPDRVRKIALIGSDAE
                     KFKSGGGSSNVTPLKTVNARQGIEGRAGSQMQVTYDGTDDPQHSAQTAKDADVAVVVV
                     SDTASEGADAPCMAIDCTDDKVVVGVTTVDGKKRNLDEVITAVAKANKRTVVVMETSG
                     PVLTPWRGLVAGIVEAWYPGEYGGAAIARVLFGDVDPGGRLPATFPQREADLPTAGDP
                     LSYPGVGNVVVYKEGVFVGYRWYDARHLKPAYPFGFGKSYTRFRYSGLRIKGNKVSAV
                     VRNTGRRTGSDVAQLYIHMPHPSKDVRQPPRQLKGFR"
BASE COUNT          275 a          779 c          793 g          351 t
ORIGIN      
        1 tcctgaaccc cttgagctgg cgcggcggct ggcgcacgtc cttcgacggg tgcggcatgt
       61 ggatgtagag ctgggccacg tccgagcccg tgcgtcggcc ggtgttgcgc accaccgcgc
      121 tgaccttgtt gcccttgatc cggaggcccg agtagcggaa gcgcgtgtac gacttcccga
      181 agccgaacgg gtaggcgggc ttcaggtgcc tcgcgtcgta ccagcggtag ccgacgaaga
      241 cgccctcctt gtagacgacg acgttgccca cccccgggta gctgagcggg tcgcccgcgg
      301 tgggcaggtc ggcctcgcgc tgcgggaagg tcgccggcag ccggccgccc gggtcgacgt
      361 cgccgaagag cacgcgggcg atcgccgcac cgccgtactc gcccgggtac cacgcctcga
      421 cgatgccggc cacgaggccg cgccacggcg tcagcaccgg gccgctcgtc tccatcacca
      481 cgacggtgcg cttgttcgcc ttcgccacgg cggtgatcac ctcgtcgagg ttgcgcttct
      541 tgccgtcgac cgtcgtgacc ccgacgacca ccttgtcgtc cgtgcagtcg atcgccatgc
      601 acggcgcgtc cgcgccctcg gaggcggtgt cggacacgac gaccaccgcg acgtcggcgt
      661 ccttcgcggt ctgcgccgag tgctgcgggt cgtcggtgcc gtcgtaggtc acctgcatct
      721 gtgagccggc ccggccctcg atgccctggc gcgcgttcac cgtcttgagc ggggtgacgt
      781 tcgacgagcc gccgccggac ttgaacttct cggcgtcgga cccgatcagg gcgatcttcc
      841 tcaccctgtc cggccgcagc ggaagcacgt tgtggcggtt gcgcagcagc gtgatcccgc
      901 cctcctcgat gtgctgcgcc tccagggcgt gcgcgtcgac cgggatctgc gcgtcgtcgt
      961 tcctgtagcc ctcgcggtcg aacacgccga acgcgaacat cgtgcgcagg atccgccgca
     1021 cgtgctcgtt cacgtcggcc tcgctcgcct tgccggtgac gagcgcctgg gtggtgttgg
     1081 tgggcgagta cgagaagccg aacggctcga agtcgagccc gttcttgagc gacgcggcgg
     1141 tgtcgtgccc cgccgggtag tcggccacca cgaaccccgg gaagccccac tcccgcttga
     1201 ggatgtccat cagtagatgc gtgttctcgc acgcgaactg cgagttcacc tggttgtagg
     1261 cgcacatcac ggtgccgctg ccgccctcct tcaccgccgc ctcgaactgc ggcaggtaga
     1321 cctcgcgcag cgtccgctcg tcgatccgct cgtcgatctg catgcggtcc ttctcctggt
     1381 tgttcgccgc gtagtgcttc acctcggcga tcacgccgcg gctctgcgcg cccttgatcc
     1441 accccaccgc ctggcgcgcg gcgaggtagg tgtcctcgcc gtaggcctcg aaggtgcggc
     1501 cggcacgcgg cgtgcgcatg atgttcacgg tgggcgcgaa cacgacgtcg ttgcccttcg
     1561 ccttcacctc gtcggccacg agctcgccgg ccgcgcgcgc gagtgcggga tcgaacgacg
     1621 ccgccagccc gagcggcgcg ggcatcgacg tggcgccggc cccctggcgc ggcccgacgg
     1681 ggccgtcgga gaagtacagc gtggggacgt cgacccgcgg gacgccgtag ttcgtgccgg
     1741 tgtggaactg gctgccgggc gggttggcca cgccgaactg ctcgtcgccc cagagcagct
     1801 gctgcttctc cggcagcgtg agctcggcca gcaccagctc ggcgcggcgg tcgggcgaga
     1861 gggtggtgtc gcaccacggg tgctggccgc agcgtccggc cgctccggcg gcgggagcga
     1921 gggccagcag cacgacgacc gaagcggctg cgcaggcggc cgcgaagcgc ttgatgggag
     1981 ccatcgcggg cgcggagact accccctcgg catgggcacg ggcgccggtg ggtaaccggt
     2041 ggctgggaga cggcgatcga cggggcgggg gccttggtca gagtcagacg cgcggcgtgc
     2101 gtcgcgcttg cggcatgggc gattctctgt gcgggggcgt cgggggcaca gcctccgggc
     2161 gtgcgctgcg cgccggccac accgcccagg gccaccgt
//
LOCUS       DASSYW010001197         3633 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1749995, whole genome shotgun sequence.
ACCESSION   DASSYW010001197 DASSYW010000000
VERSION     DASSYW010001197.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3633)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3633)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3633
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1749995"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2078)
                     /locus_tag="VFN38_18850"
     CDS             complement(<1..2078)
                     /locus_tag="VFN38_18850"
                     /inference="COORDINATES: protein motif:HMM:NF016513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HET9013895.1"
                     /translation="MHRQLTPTLHAVRSASTIASSRPAYAAGLRAAVATVVPLLLAQV
                     FGTGGATWMSLGGFSGALADRGGPYRTRALTMAAVTLSCAAAIALGTVASGHFALAIA
                     LTFVVALATSLARVWGAAGASVGGATLTAFVIALAFPAEGADGPWLRAGFDIAGGLWS
                     MAIALVLWPLQPYRPARLAVAQSYRAFAAYAADVALRLRATPATDTSELPAGSRAVRG
                     ALEDARLVLAQSRRGRPGTSEREQRLVVLGEAVDQLFGHAVAVAETVDSIHAVARVAD
                     ADAAIVATLEAVTESAHRLATAVESERQPAPISIDWSGDALRAALARHGRDADADAAV
                     HYQQAAAILDRAAQYAGVAAVTVAALTEGHAPAVPVPNAVLADPDESVSPFATMRDIL
                     SPDSLVLRYALRVAVVATVAVALGEVLDIKRGYWMTITVIVILQPYTGLTTQRAVQRV
                     VGTVLGGLLTAALGALFHDPRAILVLSFVFAATCVALLPVNYAAFSIFLTPTFVLLAE
                     ASAGDWHLATTRVLNTLLGGALALLGSRILWPSPEKTRLPGYMTAALRANRDYLERVV
                     SLFDDRSELAGRTLRESRRTIGLATVNAEESFQRLLGESSGGGAARLASVMTFLTYTR
                     RLTASIAALALTRHTEPGIGAGAIRPFAATAMAVLDDLAGSIEAGREPAALPAVVTSE
                     AARTREAEAPP"
     gene            2150..3154
                     /locus_tag="VFN38_18855"
     CDS             2150..3154
                     /locus_tag="VFN38_18855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HET9013896.1"
                     /translation="MSHAHPHSEPHAHTHDHAHDAHGHGHAHAPQRFGAGHQHHHAPA
                     SFDRAFLVGVSLNVAFVLAETIFGLRAQSLALLADAGHNLSDVLGLALAWAGSVLARR
                     GPTPRFTYGLRRFSILAAIANAGLLLIAVGAIAIESIQRFRHPAPVASTTVMIVAGIG
                     IVINVGTALGFLRGRHGDLNIRGAFLHMMSDAVASAGVVVTGLLITITSWLWLDPAVG
                     LLLAALITWSSWGLARNSLDLALDAVPAGIDYDAVSDVLHRLDGVVAVHDLHIWGMST
                     TDVALTAHLVRPCGGGEDALLADATRQLRDRFGISHATIQLERGLAVHPCELADPDRV
                     "
     gene            3183..>3633
                     /locus_tag="VFN38_18860"
     CDS             3183..>3633
                     /locus_tag="VFN38_18860"
                     /inference="COORDINATES: protein motif:HMM:TIGR01444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FkbM family methyltransferase"
                     /protein_id="HET9013897.1"
                     /translation="MKLKEVLYGLGIKPRPRVYPFELVSFQLQRDGEVGFAQWQHPGA
                     LRWKTTITQAMVDEARHWIKPGDTAIDVGAHTGDSTLPLALAAGPTGAVLALEPNPHV
                     FKVLLATSALNRRTTNIYPLMFAAVPEDGELMFEYSDSGYCNGGLHEG"
BASE COUNT          517 a         1409 c         1224 g          483 t
ORIGIN      
        1 ggcggagctt ccgcctcgcg cgtgcgcgcc gcttccgacg tgaccaccgc cggcagcgcc
       61 gccggctcgc ggccggcctc gatcgatccc gcgaggtcgt cgagcacggc catcgccgtg
      121 gccgcgaagg gacgtatcgc ccccgcgccg atgcccggct ccgtgtgccg ggtcagcgcc
      181 agtgcggcga tggacgcggt caggcgccgc gtgtaggtga ggaaggtcat cacgctcgcc
      241 agccgcgccg cccctccacc gctcgattcg ccgagcaggc gctggaacga ctcctcggcg
      301 ttcacggtcg ccagaccgat ggtgcgccga gactcgcgca gcgtgcggcc cgccagctcg
      361 ctccggtcgt cgaagagcga cacgacgcgc tccagatagt cgcggttcgc gcggagcgcc
      421 gccgtcatgt aacccggcag ccgcgtcttc tccgggctgg gccacaggat ccgcgagccg
      481 agcagcgcca gcgccccgcc cagtagcgtg ttcagcacgc gcgtcgtggc caggtgccag
      541 tcgcccgcgc tcgcctcggc cagcaggacg aaggtcggcg tgaggaagat cgagaaggcc
      601 gcgtagttca ccggaagcag cgccacgcac gtcgccgcga acacgaacga gagcacgagg
      661 atggcgcgcg ggtcgtggaa cagggcgccg agggccgccg tgaggagtcc gccgagcacc
      721 gtgcccacga cgcgctgcac ggcacgctgc gtcgtcaggc cggtgtacgg ctggaggatc
      781 acgatcaccg tgatcgtcat ccagtagcca cgcttgatgt cgagcacctc gcccagcgcc
      841 acggccaccg tcgccacgac cgcgacgcgt agcgcgtagc ggaggacgag cgaatccggc
      901 gacaggatgt cgcgcatcgt cgcgaagggc gacaccgact cgtccgggtc cgccagcacc
      961 gcgttcggga cgggcacggc cggcgcatgt ccctcggtga gtgccgccac ggtcaccgcc
     1021 gcgacgcccg cgtactgggc cgcgcgatcg aggatggccg ccgcctgctg gtagtgcacc
     1081 gcggcgtccg catcggcgtc gcgaccgtgc ctcgcgagcg ccgcgcgcag cgcatcgcca
     1141 ctccagtcga tcgagatcgg cgcgggctgt cgttccgact ccaccgcggt cgccagccga
     1201 tgcgccgact cggtcaccgc ttcgagcgtc gccacgatcg ccgcgtccgc gtcggcgact
     1261 cgggccacgg cgtggatgct gtccaccgtt tccgccacgg ccaccgcgtg cccgaacagc
     1321 tggtccaccg cttcgccgag cacgaccagc cgctgctccc gctcgctcgt gccgggccgc
     1381 ccgcgccgcg actgcgcgag caccagccgc gcgtcctcca gcgcgccccg cactgctcga
     1441 ctgcccgccg gcagctcgct ggtgtccgtc gctggcgtgg cgcgcagccg gagcgcgacg
     1501 tccgccgcgt aggcggcaaa ggcacggtag ctctgcgcca ccgccagccg cgccggccgg
     1561 tacggctgca gcggccagag cacgagcgcg atcgccatcg accacaggcc gccggcgatg
     1621 tcgaatcccg cccggagcca tggaccatcg gcgccctcgg ccggaaaggc gagcgcgatc
     1681 acgaaggcgg tgagcgtcgc gccgcccacg ctcgcccccg cggcgcccca gacgcgcgcc
     1741 aggctcgtcg cgagtgcgac cacgaacgtg agcgcgatcg ccaacgcgaa gtgaccgctc
     1801 gccacggtgc ccagcgcgat cgctgcggcg cagctgagcg tcaccgccgc catggtgagc
     1861 gcgcgtgtcc ggtacgggcc tccccgatcg gccagggccc cgctgaatcc gcccaggctc
     1921 atccacgtcg cgccgccggt gccgaacacc tgcgccagca ggagcggcac gacggtcgcg
     1981 accgcggcac gcaggccggc ggcgtacgcc ggccgcgagc tcgcgatggt cgacgcggaa
     2041 cggaccgcat gcagcgtggg agtcagctgg cgatgcatcg acccaagata ccggcgcgac
     2101 cggccgtgcg cgctcgccct ccccgagtgc cgtcgtatat tgcgtctcga tgagtcacgc
     2161 gcatccccac tcggagccgc acgcgcacac gcacgatcat gcgcacgacg cgcatgggca
     2221 cgggcatgcg cacgcgccgc aacggttcgg cgcgggccac cagcaccatc atgcgccggc
     2281 gagcttcgac cgcgccttcc tcgtcggcgt cagcctcaac gtcgcgttcg tcctcgccga
     2341 gacgatcttc ggcctgcggg cccagtcgct cgccctgctg gcggacgccg gccacaacct
     2401 cagcgacgtg ctggggctcg cgctcgcctg ggcgggaagc gtcctcgcgc gacgcggacc
     2461 cacgccccgc ttcacctacg ggctgcgccg gttctccatt ctcgccgcca tcgccaacgc
     2521 cggcctcctg ctcatcgccg tcggggcgat cgccatcgag tcgatccagc gcttccggca
     2581 cccggctccg gtggcgagca ccaccgtcat gatcgtcgcc ggtatcggca tcgtcatcaa
     2641 cgtcggcacc gcgctgggct tcctgcgcgg tcgtcacggc gacctgaaca ttcgcggcgc
     2701 cttcctgcac atgatgtccg acgctgtcgc ctcggcgggc gtcgtcgtga ccggcctgct
     2761 catcaccatc acgagctggc tctggctcga cccggcggtc ggcctgctgc tggccgcgct
     2821 catcacctgg agcagctggg gactggcccg gaactcgctc gacctcgccc tcgacgcggt
     2881 gccggcgggc atcgactacg acgccgtgag cgacgtgctg caccggctcg acggcgtcgt
     2941 ggccgtgcac gaccttcaca tctggggcat gagcaccacc gacgtcgccc tcacggcgca
     3001 cctcgtgcgc ccttgcggcg gcggcgagga cgcgctcctc gccgatgcca cgcggcagct
     3061 gcgcgaccgg ttcggcatct cgcacgccac catccagctc gagcgcggcc tcgccgtcca
     3121 cccgtgcgag ctcgccgatc ccgaccgcgt gtagcgggca tctccactca gccagggcgc
     3181 cgatgaaact caaggaggtg ttgtacggac tcggcatcaa gccgcgccct cgcgtctatc
     3241 ccttcgagct cgtgagcttt cagctccagc gcgatggcga ggtgggcttc gcgcagtggc
     3301 agcacccggg tgcgctgcgc tggaagacca ccatcacgca ggcgatggtc gacgaggcgc
     3361 ggcactggat caagcccggc gacacggcga tcgacgtcgg cgcccacacg ggcgactcca
     3421 ccctgccgct cgccctcgcg gcgggcccca ccggcgccgt gctcgcgctc gagcccaacc
     3481 cgcacgtctt caaggtgctg ctcgccacga gcgccctgaa ccggcgcacg accaacatct
     3541 atccgctcat gttcgccgcc gtcccggagg atggagagct gatgttcgag tattcggact
     3601 ccggctactg caacggcggc ctgcacgagg gca
//
LOCUS       DASSYW010001198         3145 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_14563, whole genome shotgun sequence.
ACCESSION   DASSYW010001198 DASSYW010000000
VERSION     DASSYW010001198.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3145)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3145)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3145
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14563"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..662)
                     /locus_tag="VFN38_18865"
     CDS             complement(<1..662)
                     /locus_tag="VFN38_18865"
                     /inference="COORDINATES: protein motif:HMM:NF012239.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HET9013898.1"
                     /translation="MAISQGAGASGGLLRICTAGSVDDGKSTLIGRLLYDSQSVYEDQ
                     ISSIEKASKNRNAGPIDFSLFTDGLRAEREQGITIDVAYRYFATARRKFILADTPGHE
                     QYTRNMATGASTADVAILLVDARNGVRTQSRRHARIARLLGITDFVLAVNKMDLMDFD
                     QDVFEKIVDDFDDLLTGASVHAIPMSALLGDNVITKSDRTPYFDGPPLLEFLETVSLK
                     RNT"
     gene            complement(662..1600)
                     /gene="cysD"
                     /locus_tag="VFN38_18870"
     CDS             complement(662..1600)
                     /gene="cysD"
                     /locus_tag="VFN38_18870"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: protein motif:HMM:NF009214.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004781 - sulfate adenylyltransferase
                     (ATP) activity [Evidence IEA];
                     GO_process: GO:0019419 - sulfate reduction [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit CysD"
                     /protein_id="HET9013899.1"
                     /translation="MSTVATSPPPSTSLQLDHLRALEAESIQIMREVVAEFERPVMLY
                     SIGKDSSVLLRLAQKAFYPGPIPFPLLHVDTTYKFREMIEFRDRMAKEVGARLIVHTN
                     QEAIADGTQPFKVGTQRCCGLLKTKSLLDGLSAGNFDAAIGGARRDEERSRAKERVFS
                     VRDANGQWDPKRQRPELWHLLNARLKPGESIRVFPLSNWTEIDVWQYIHVENIPIVPL
                     YFAKERQVIVRGLSLVVQEQPFVVTMPGEKLQKVKCRMRSLGCSPCTGAIHSDADTVP
                     KIIEELIATRQSERQLRIIDHDQDGSMELKKREGYF"
     gene            1884..2282
                     /locus_tag="VFN38_18875"
     CDS             1884..2282
                     /locus_tag="VFN38_18875"
                     /inference="COORDINATES: protein motif:HMM:NF039360.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HET9013900.1"
                     /translation="MKAHLALAALLVALAPGGDATAHHSFAATFDASKAIRVTGKLAK
                     VEWTNPHIYFYVDVTDEKGTVVRWACESGAPGALSRRGFKRSLLKLGDELIVDGYQAK
                     NGANLMDARRVTLPDGQILVGASAGDGGPQ"
     gene            2279..3103
                     /locus_tag="VFN38_18880"
     CDS             2279..3103
                     /locus_tag="VFN38_18880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013901.1"
                     /translation="MRAFAAACGVLALATALVAQERPMRLDDTKVPKGRPAPRMADGK
                     PDFSGYWKGLTQTSPGGNIGKDLPGWKLPLTPAGEAALKHNLTATVDPEAVCIIGGIP
                     RHNASGLPFEVLQGKNKVVFMYWYSYFRLVPFTPGLKHSDDPDPAFFGEEIGRWEGDT
                     LVIDSIGFKGEKVWIDENANPVSDAVHVVERWTRPDYNHIHVDMRIEDPKYYTRPFTY
                     SRTWALGEPDEQIQEYSCSENNVDAAHLGFGPGPIRPDGTRGYIDPAPLPPPVQKK"
BASE COUNT          537 a         1000 c         1080 g          528 t
ORIGIN      
        1 gtgttgcgct tgaggctcac ggtctcgagg aactcgagca gcggtgggcc gtcgaagtag
       61 ggcgtgcggt cgctcttcgt gatcacgttg tcgccgagca gcgcgctcat cggaatcgcg
      121 tgcaccgagg cgccggtcag cagatcgtcg aagtcgtcca cgatcttctc gaagacgtcc
      181 tgatcgaagt ccatcaggtc catcttgttg acggccagca cgaagtcggt gatgccgagc
      241 agccgcgcga tcctggcgtg ccgccgcgac tgggtgcgga ccccgttgcg cgcgtccacc
      301 agcaggatgg cgacatcggc cgtagaggcg ccggtggcca tgttgcgggt gtactgctcg
      361 tgccccggcg tgtcggccag gatgaacttg cggcgcgcgg tcgcgaagta gcggtaggcg
      421 acgtcgatcg tgatgccctg ctcgcgctcg gcgcgcagac cgtcggtgaa gagggagaag
      481 tcgatcggcc cggcgttgcg attcttcgac gccttctcga tcgagctgat ctgatcctcg
      541 tagaccgact gcgagtcgta gagcagccgg ccgatgagcg tgctcttgcc gtcgtccacg
      601 ctgccggccg tgcagatgcg cagcagcccg ccggacgcgc cggccccctg ggagatcgcc
      661 atcagaagta gccttcccgc ttcttcagct ccatcgaccc gtcctggtcg tggtcgatga
      721 tgcgcagctg gcgctccgat tgccgagtgg cgatgagctc ctcgatgatc ttcggcaccg
      781 tgtcggcatc cgagtggatg gcgcccgtgc acggcgagca gccgagcgac cgcatccggc
      841 acttcacctt ctgcagcttc tcgcccggca tcgtgacgac gaacggctgt tcctgcacga
      901 cgagcgagag gccccgcacg atcacttggc gttccttggc gaagtagagc ggcacgatcg
      961 ggatgttctc gacgtggatg tactgccaga cgtcgatctc ggtccagttc gagagcggga
     1021 acacgcggat gctctcgccc ggcttgagcc gcgcgttcag caggtgccac agctcgggac
     1081 gctgccgctt cgggtcccac tggccgttgg cgtcgcgcac cgagaacacg cgctccttgg
     1141 cgcgcgagcg ctcctcgtcg cggcgggcgc cgccgatggc ggcgtcgaag ttgccggcgg
     1201 agaggccgtc gagcagcgac ttggtcttga gcaggccgca gcagcgctgc gtgcccacct
     1261 tgaagggctg cgtgccgtcg gcgatcgctt cctggttggt gtggacgatg agccgcgcgc
     1321 cgacctcctt ggccatgcgg tcgcggaact cgatcatctc cctgaacttg taggtggtgt
     1381 cgacgtggag gagcgggaac gggatggggc cggggtagaa cgccttctgg gccagccgga
     1441 ggagcaccga cgagtccttc ccgatcgaat acagcatcac cggccgctcg aactcggcca
     1501 cgacctcgcg catgatctgg atgctctcgg cttcgagcgc gcgcaggtgg tcgagctgaa
     1561 ggctggtgga cggcggtggc gatgtggcga ctgtggacat ataaaagtca aaaggcccgg
     1621 tggacgttgt ccccgggcct cgaactgcct tctgttcagt tgtttctggg tattacccga
     1681 acagacgcac cgttgccgcg gggacattgg aagtcctctg acaacaacac gagcaacgac
     1741 agatcgaggc ggacattacg ttcagatttt acccctgcgc caaacggatt gccaaggatg
     1801 ggctcggccc tggccgggat ggggtaggct ccccttgcga accggcgtca agccggtttg
     1861 ccagacactg tcggaggcga cccatgaaag cgcatctcgc cctggcggcg ctcctggtgg
     1921 ccctggcccc gggcggcgac gccacagccc accactcctt tgccgctacc ttcgatgcca
     1981 gcaaggcgat ccgggttacc gggaagctcg ccaaggtcga gtggaccaac ccgcacatct
     2041 acttctacgt ggacgtcacc gacgagaaag gcacggtggt ccgctgggca tgcgagtctg
     2101 gcgcgcccgg cgcgctgtcg cggcgcgggt tcaagcgcag cctgctgaag ctcggggatg
     2161 agctcatcgt ggacggctac caggcgaaga acggcgccaa cctgatggac gcccgccgcg
     2221 tgacgctgcc agacggccag attctcgtgg gcgcgtcggc cggcgacgga ggtccgcagt
     2281 gagggcgttc gccgcggcgt gcggagtgct cgcgctggcc acggcgctcg tggcgcagga
     2341 gcggccgatg cggctcgacg acaccaaggt gccgaagggg cggcccgcgc ctcggatggc
     2401 cgacggcaag ccggacttca gcggctactg gaaggggctc acgcagacga gtcccggtgg
     2461 caacatcggc aaggacctgc ccggatggaa gctgccgttg acgccagccg gcgaagcggc
     2521 gctgaaacac aacctcacgg ccacagtcga tcccgaagcc gtgtgcatca tcggcggcat
     2581 tccgcgccac aacgccagcg ggctgccgtt cgaggttctg cagggcaaga acaaggtcgt
     2641 cttcatgtat tggtacagct acttccgcct cgtgccgttc acgccggggc tgaagcactc
     2701 ggacgatccg gatcccgcgt tcttcggcga ggagatcggc cggtgggagg gcgacacgct
     2761 ggtcatcgac tccatcggat tcaagggcga gaaggtgtgg atcgacgaga acgcgaaccc
     2821 ggtgagcgac gccgtgcacg tggtggagcg ctggacgcgt cccgactaca accacattca
     2881 cgtggacatg cggatcgagg atccgaagta ctacacgcgg ccgttcacct actcgcgcac
     2941 atgggcgctc ggcgaacccg acgagcagat ccaggagtac tcctgcagcg agaacaacgt
     3001 ggacgcggcg catctcggct tcgggcccgg accgatccgc cccgacggca cgcggggcta
     3061 catcgatccg gcgccgcttc cgccgccggt gcagaagaaa taggcccgtc gaaggattga
     3121 tcatgatcta cggaatcacg ggagc
//
LOCUS       DASSYW010001199         2668 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_950054, whole genome shotgun sequence.
ACCESSION   DASSYW010001199 DASSYW010000000
VERSION     DASSYW010001199.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2668)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2668)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2668
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_950054"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..292
                     /locus_tag="VFN38_18885"
     CDS             <1..292
                     /locus_tag="VFN38_18885"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HET9013902.1"
                     /translation="PLSKDLPEGDPRVGTGGPGWKIKCETAGNPRKHEVGALSMAHAG
                     KDTGGSQFFMVLSEENTRHLNGVHTVFGKITGGLDAMKQIKKNDVMTKVRVA"
     gene            289..453
                     /locus_tag="VFN38_18890"
     CDS             289..453
                     /locus_tag="VFN38_18890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013903.1"
                     /translation="MSAPHQGDKSAAFTGLILGAIAIFVIMFGIVRWTNAKYAGHGEG
                     GEAPAAAATH"
     gene            complement(483..1358)
                     /locus_tag="VFN38_18895"
     CDS             complement(483..1358)
                     /locus_tag="VFN38_18895"
                     /inference="COORDINATES: protein motif:HMM:NF024700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HET9013904.1"
                     /translation="MCPRRPIVENIAGDAPAHGGRAPFLREVHRRAAGDDSRFPFSVP
                     VIRTLDRLSLDAPVTFFVGENGSGKSTLLEGIAAAARLPVVGSADLDADATLGAQREL
                     AGALRLVWSRKTPRGFFLRAEDFFGFAKRLSALRSELLQRIAELEVEYADRSDYARRL
                     AMGPAVASLADMERRYGVDLDANSHGQSFLRLFQSRFVPDGLYLLDEPEAPLSPQSQL
                     ALMAMMQEMLAAGAQFVIATHSPILLAFPEATIYSFDRAPAEVVRYDELDHVVLTRDF
                     LNAPERYLRALAKPG"
     gene            1430..2023
                     /locus_tag="VFN38_18900"
     CDS             1430..2023
                     /locus_tag="VFN38_18900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HET9013905.1"
                     /translation="MLPSRDDALALMQEYTASDSLRKHMLAVEAAMRAYAGQRGEDVE
                     RWGLAGLIHDFDYERWPNDAHSPTEEHPSEGVRILRARGWPEDILEAILGHASYCNVP
                     RVTPMARTLFAVDELTGLITATALVKPSRSVHDVEARSVRKKMKDKAFARGVSREDVV
                     NGAAELGVELDDHIAFVIAAMQRSADAIGLAGTPVPG"
     gene            2101..>2668
                     /locus_tag="VFN38_18905"
     CDS             2101..>2668
                     /locus_tag="VFN38_18905"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HET9013906.1"
                     /translation="MPATAVARTPPLLLLMPTPADGAAAERAIVVSAQCGSDDAFSAL
                     VRIHQRRAYAIVRAIVLSHEDAEDAVQEGFLHAHRALDRFRPDQPFGAWLYRIMANAA
                     LDLVRRRKVRDADELPESIPMPFRDPAESGELRERLQQALAHLTARQRAVIVMHDVEG
                     FTHGEIGRTLAIPEGTARSDLHHARAALR"
BASE COUNT          424 a          964 c          933 g          347 t
ORIGIN      
        1 tccgctctcg aaggatctcc ccgaaggcga tccgcgcgtg ggcacgggtg gcccgggctg
       61 gaagatcaag tgcgagacgg cgggcaaccc gcgcaagcac gaggtcgggg cgctctccat
      121 ggcgcacgcc ggcaaggaca ccggcggcag ccagttcttc atggtgctgt ccgaggagaa
      181 cacccggcac ctgaacggcg tgcacacggt gttcggcaag atcaccgggg gcctggacgc
      241 gatgaagcag atcaagaaga acgacgtcat gaccaaggtg cgggtcgcat gagcgcgccg
      301 catcagggcg acaagtccgc cgcgttcacc ggcctgatcc tcggcgccat cgcaatcttc
      361 gtgatcatgt tcggcatcgt gcgctggacc aacgcgaagt acgcgggaca cggcgagggg
      421 ggcgaagccc cggcggcggc ggccacgcac taggccgccc gtcgggagac gccccgcccg
      481 ggctagccgg gtttcgcgag cgcgcgcagg tagcgctccg gcgcgttcag gaagtcccgc
      541 gtgagcacca cgtgatccag ctcgtcgtac cgcaccacct ccgccggcgc acggtcgaag
      601 ctgtagatcg tcgcctcggg gaaggcgagc aggatcggcg agtgggtcgc gatcacgaac
      661 tgcgcgccgg cggccagcat ttcctgcatc atcgccatca gcgcgagctg gctctgaggg
      721 ctgagcgggg cctcgggctc gtccagcaga tagagcccgt cgggcacgaa tcgcgactgg
      781 aacaggcgca ggaagctctg gccgtgggag ttggcgtcca ggtccacgcc gtagcggcgc
      841 tccatgtcgg ccagcgacgc gaccgccgga cccatcgcca gcctccgtgc gtagtccgac
      901 cggtcggcgt actccacctc gagctcggcg atgcgctgca gcagctcgct ccgcagcgcc
      961 gacagccgct tcgcgaagcc gaagaagtcc tcggcgcgca ggaagaagcc ccgcggcgtc
     1021 ttgcgcgacc acaccagccg gagcgcgccg gccagctcgc gctgcgcgcc cagcgtcgcg
     1081 tcggcgtcca ggtcggcgct gccgacgacg ggcagccggg ccgccgcggc gatcccctcc
     1141 agcagggtgg acttgccgga gccgttctcg ccgacgaaga aggtgaccgg cgcatcgagc
     1201 gacaggcgat cgagggtccg gatcacgggc acgctgaagg ggaagcgaga gtcgtcgccg
     1261 gctgcgcgcc gatgcacctc gcgcaggaag ggcgctcgcc caccgtgcgc gggagcgtcg
     1321 ccggcgatat tctccacgat ggggcggcgc gggcacatgc tgaatgctgc gcccgcgacg
     1381 cccccgcgcg caatccaccc cggccgcgcc acaaccgccc accgctgcca tgctgccaag
     1441 ccgagacgac gccctcgccc tcatgcagga gtacaccgcc agcgactccc tgcggaagca
     1501 catgctcgcc gtggaggcgg cgatgcgcgc ctacgccggc cagcggggcg aggacgtgga
     1561 gcggtggggg ctcgcggggc tcatccacga cttcgactac gagcgctggc ccaacgacgc
     1621 gcactcgccc accgaagagc atcccagcga gggggttcgc atcctgcgcg cccgcggctg
     1681 gcccgaggac atcctcgagg ccatcctcgg ccacgcgagc tactgcaacg tcccgcgcgt
     1741 caccccgatg gcccggacgc tgttcgccgt ggacgagctc acggggctca tcaccgccac
     1801 cgcgctcgtg aagccttccc ggagcgtgca cgacgtggag gccaggtcgg tgcggaagaa
     1861 gatgaaggac aaggcgttcg cccgcggcgt cagccgcgag gacgtcgtga acggcgccgc
     1921 cgagctcggg gtggagctgg acgaccacat cgcgttcgtc atcgcggcca tgcagcgctc
     1981 cgccgacgcc atcgggctgg ccggaacccc cgttccgggg tagtgcctgt catgacgctc
     2041 tccagttcaa cagttcgccg gccggctccg taattgggat gacgattccc cgctggtgcc
     2101 atgcccgcca ccgccgtagc ccgcacgccg ccgctcctgc tgctgatgcc gacccccgct
     2161 gacggcgcgg cagccgagcg cgcgatcgtg gtctcggcgc agtgcggatc ggacgacgcc
     2221 ttctcggcgc tcgtccgcat ccaccagcgg cgggcgtacg ccatcgtgcg ggccatcgtg
     2281 ctgtcgcacg aggacgcgga ggacgcggtg caggagggct tcctccacgc ccaccgcgcg
     2341 ctggaccggt ttcgccccga ccagccattc ggggcgtggc tctaccggat catggcgaat
     2401 gccgcgctcg acctcgtccg ccgccgcaag gtgcgtgacg cggacgagct tccggagtcc
     2461 atcccgatgc cgttccgcga cccggcggaa tcgggggagc tccgggagcg gctgcagcag
     2521 gcgctcgcgc atctcacggc caggcagcgc gcggtcatcg tgatgcacga cgtggaaggc
     2581 ttcacccacg gcgagatcgg gcgcacgctc gccatcccgg aaggaaccgc tcgatccgat
     2641 ctccatcatg cccgcgccgc gctgcgcc
//
LOCUS       DASSYW010001200         2071 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_990821, whole genome shotgun sequence.
ACCESSION   DASSYW010001200 DASSYW010000000
VERSION     DASSYW010001200.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2071)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2071)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2071
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_990821"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..679
                     /locus_tag="VFN38_18910"
     CDS             <1..679
                     /locus_tag="VFN38_18910"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HET9013907.1"
                     /translation="PMRGNPQNSVSVFGSAMPGYAVSRIGLPATIDSMAAIPNPVPAD
                     ARSLSNGRMYYQINCAVCHGESGKGDGPILASKAIFPPPVIGAAAEARSDGYIWGVIR
                     NGRGAMPSYNRIEEMDRWDVVNYVRGLQGRYSVAIGPAGLPGETGDKLPGYSQMGPTR
                     PSPYWHRAGAQAGPTRGGVAAPGTPPAASPASVPVDTAHAPAADSARPASPATTSTPT
                     PKTGGER"
     gene            676..2004
                     /locus_tag="VFN38_18915"
     CDS             676..2004
                     /locus_tag="VFN38_18915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013908.1"
                     /translation="MSLHHPLPVPTREQLVAAYAKPLPKALRTASFVLAAIGVLAFVV
                     GLFVAPDRAWRAYHFNWLYFTSLSSAGVMFVAVQRITTARWSRPIIRFMEGYVAFLPV
                     ALLLLLVSVFLGKGHIFPWTHEVPPVPEKVTWFDGGFLTLRVLLSFLVITALSLWYIY
                     TSVRLDVGLVPEAGSNWARGLRARMRAGYGDERRELHSTHSLQGKLAVLLALAFGYGW
                     SVLAFDLSMGLSLHFQSTLYGWWFFMGGWLCSLTLFTLLVLAWRRFLHAEAFIGENHF
                     HDLGKLCFAFTAFWGYLTFGQYLVIWYGNLGEETHWPRLRLIEPWVGLSVTAVIMVFF
                     APFFGLLSRAAKVFHPTLALFTGISLVGMWLVRYLEVYPSLYGEAAHLPFGLWEVAIT
                     LGYVGVWGLCYMAFMNAFPRIRVLLMTSPYRDEVQVPVNPETMEPLPAHE"
BASE COUNT          252 a          773 c          685 g          361 t
ORIGIN      
        1 cccgatgcgc ggcaacccgc agaactccgt gtcggtgttc ggcagcgcga tgcccggcta
       61 tgccgtgtcg cgcatcgggc tgccggcgac gatcgactcg atggcggcca tcccgaatcc
      121 ggtgcccgcc gacgcgcgct cgctcagcaa cggccgcatg tactaccaga tcaactgcgc
      181 cgtctgtcac ggcgagtcgg ggaagggcga cggtcccatc ctcgcctcca aggcgatctt
      241 cccgccgccg gtgatcggcg cggccgccga ggcgaggtcc gacggctaca tctggggcgt
      301 catccggaac ggccgcggcg cgatgccgtc gtacaaccgc atcgaggaga tggatcgctg
      361 ggacgtcgtg aactacgtac gcggcctgca gggccggtat tcggtcgcga tcggccccgc
      421 ggggctgccc ggcgagacgg gcgacaagct gcccggctac tcccagatgg gcccgacgcg
      481 tccgtcgccg tactggcacc gcgccggcgc ccaggccggc cccacgcgcg gcggagtcgc
      541 cgcgcccggc accccgccgg ccgcctcccc ggcgagcgtt cccgtcgata cggcgcacgc
      601 gccggccgcc gacagcgcgc gccccgcgtc gcccgccacc acttccaccc cgacgccgaa
      661 gaccggaggc gagcggtgag cctgcatcat cccctacccg tcccgacgcg cgagcagctc
      721 gtcgcggcgt acgccaagcc gctcccgaag gcgctccgca ccgcgtcgtt cgtgctcgcg
      781 gccatcggtg tcctcgcctt cgtcgtcggg ctgttcgtcg cgcccgaccg cgcctggcgc
      841 gcgtaccact tcaactggct gtacttcacc tccctctcct cggccggcgt gatgttcgtc
      901 gccgtgcagc gcatcaccac cgcgcgctgg tcgcggccga tcatccgctt catggagggc
      961 tacgtcgcct tcctgccggt ggcgctgctg ctgctcctcg tgagcgtgtt cctcggcaag
     1021 ggccacatct tcccgtggac gcacgaggtg ccgcccgtcc ccgagaaggt gacctggttc
     1081 gacggcggct tcctcacgct gcgcgtgctg ctgtcgttcc tcgtcatcac cgcgctgtcg
     1141 ctctggtaca tctacacctc cgtgcggctc gacgtcggtc tcgttcccga ggcgggctcg
     1201 aactgggccc gggggctgcg cgcccgcatg cgcgccggct acggcgacga gcgccgcgag
     1261 ctgcacagca cccattcgct gcagggcaag ctggccgtct tactcgccct cgccttcggg
     1321 tacggctggt cggtcctcgc cttcgatctc tcgatggggc tgtcgctgca cttccagagc
     1381 acgctctacg ggtggtggtt cttcatgggc gggtggctct gctcgctcac cctcttcacc
     1441 ctgctcgtcc tggcctggcg gcgcttcctc cacgccgagg cgttcatcgg cgagaaccac
     1501 ttccacgacc tcggcaagct gtgcttcgcc ttcaccgcct tctggggcta cctcacgttc
     1561 gggcagtacc tggtgatctg gtacggcaac ctgggcgagg agacgcactg gccgaggctg
     1621 cgcctcatcg agccctgggt cgggctcagc gtgacggcgg tgatcatggt gttcttcgca
     1681 cccttcttcg ggctgctctc gcgcgccgcc aaggtgttcc accccacgct ggcgctgttc
     1741 acgggcatca gcctcgtggg catgtggctc gtgcgctacc tcgaggtcta cccgtcgctg
     1801 tacggcgagg cggcgcacct gccgttcggg ctgtgggagg tcgccatcac gctcggctac
     1861 gtgggcgtgt gggggctctg ctacatggcg ttcatgaacg ccttcccgcg aatccgcgtg
     1921 ctgctcatga cctcgcccta ccgtgacgag gtgcaggtgc cggtgaatcc ggaaacgatg
     1981 gagcccctgc cggcgcacga gtagtcggac atcgggccgg tgcgccgcgt cgcggcggct
     2041 ggccccggaa gccgtgaagg gcacctcggg c
//
LOCUS       DASSYW010001201         3200 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1082861, whole genome shotgun sequence.
ACCESSION   DASSYW010001201 DASSYW010000000
VERSION     DASSYW010001201.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3200)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3200)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3200
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1082861"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..751
                     /gene="pdxA"
                     /locus_tag="VFN38_18920"
     CDS             <1..751
                     /gene="pdxA"
                     /locus_tag="VFN38_18920"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: protein motif:HMM:TIGR00557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050570 - 4-hydroxythreonine-4-phosphate
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HET9013909.1"
                     /translation="ALRSPAQAGRCAGLAVDRAVALAQAGAVEGIVTAPLDKHALLAG
                     GYDFPGHTELLAARTGRHVAMMLAATRPTAGARLPLRVVLATTHVPLRDVPRLLTAEV
                     IASAAEVTRAGLREWFGIAEPRIALCALNPHAGDGGRFGREDDELLAPAARAAGLAGP
                     FPADTVFVRAMRGAFDAVIAPYHDVGMTAIKVAAFGSAVNVTLGLPFPRTSPDHGTAL
                     DIAGQGIADPSSMIEAVLLCAEIAVRTRAGR"
     gene            complement(788..2113)
                     /locus_tag="VFN38_18925"
     CDS             complement(788..2113)
                     /locus_tag="VFN38_18925"
                     /inference="COORDINATES: protein motif:HMM:NF013741.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin family protein"
                     /protein_id="HET9013910.1"
                     /translation="MLGRILALIGLLAANGFFVAAEFSVVRSRRSRLEAMARAGDAKA
                     RLVLKATASMARLLSVSQFGITLASIGIGVLAEETLAHTFAQSFAALSVPLRISAATV
                     GTVCAMAVVTYGHVVFGELAPRSAALNHPEEVSRWLVPPLMVFAWITTPFTWLLNHSA
                     DLVLRLFRQSPVSAEENVHSADELRILVEQSQEVGVLERQDAALIEGVFEFSEKNARE
                     VMTPRTAIDALDIEATLDEAVSTIIETQRSRYPVYEESIDNVVGLVLAKDFIPLLRDA
                     PEDFTMTRVMRPIHVVPGSREVEEVLADFKRLKEHMAVVLDEYGGTAGLVTMEDLLEE
                     IVGEILDEYDEPEVLDSAEPGADVLIPGSMNLHELNERFGLDVPDDEYTTIGGYVFGA
                     LGRLPVAGDRVTASHAIFTVKAMNGRRVDVLAVDLHSVGDRRAKQRGEH"
     gene            2200..2685
                     /locus_tag="VFN38_18930"
     CDS             2200..2685
                     /locus_tag="VFN38_18930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013911.1"
                     /translation="MSDAMSDSMSDYRIEKVRHGVEVTLTNGHRLDGDVFVQSSTRFR
                     PGPEEPLDLLNDDEPFLPLVLMTGAVYLVQKAQIAVVGTRLPEGDDAVDRAVVGMKTE
                     LTLVDGSTHVGSIFPEVRANRQRLIDALNDLSAPFVALFTAEQLRLVNRRHIAYVRPV
                     N"
     gene            2691..>3200
                     /locus_tag="VFN38_18935"
     CDS             2691..>3200
                     /locus_tag="VFN38_18935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013912.1"
                     /translation="MPQLDRLLSVMVSQRATALKLHESELAELEIAGAPRPMTKTALT
                     SQQVVSLLREIAPADAAARLDAGQATQFDYVSEDGAFCIDAARDGAQWRARVTLDERR
                     ERQRLNGHPRPDIPQYAAPTPTAAAPAAAHPPAPPAPASPAAVVAPPPAASDGDAVNA
                     FPGSERARAA"
BASE COUNT          448 a         1237 c         1071 g          444 t
ORIGIN      
        1 cgccctgcgg tcgcccgcgc aggcgggccg gtgcgccggc ctcgccgtcg accgcgccgt
       61 ggcgctggcg caggcgggcg cggtggaggg gatcgtcacc gcgcccctcg acaagcacgc
      121 cctgctcgcc ggcggctacg acttcccggg gcacaccgag ctgctcgcgg cgcggacggg
      181 ccgccacgtg gccatgatgc tcgccgccac ccgccccacc gcgggcgcgc gcctcccgct
      241 gcgcgtcgtg ctcgcgacca cgcacgtccc gctgcgcgac gtgccgcggc tcctcaccgc
      301 ggaggtcatc gcctcggcgg ccgaggtcac ccgcgccggg ctgcgcgagt ggttcggcat
      361 cgccgagcca cgcatcgcgc tctgcgccct caacccgcat gccggcgacg gggggcgctt
      421 cgggcgcgag gacgacgagc tgctcgcgcc cgcggcccgc gccgccggcc tggcgggtcc
      481 ctttccggcc gacaccgtgt tcgtgcgcgc gatgcgcggc gcgttcgacg cggtcatcgc
      541 gccgtatcac gacgtcggca tgacggcgat caaggtcgcc gcgttcgggt cggcggtgaa
      601 cgtcacgctc ggccttccct ttccgcgcac ctcccccgat cacggcaccg cgctggacat
      661 cgcggggcag gggatcgccg atccatcgag catgatcgag gcggtgctgc tctgcgccga
      721 gatcgccgtc cggacccgcg cggggcgctg agccggcggg gcgcggccgt cgtgcccgcc
      781 ccgctcgtca gtgctcgccg cgctgcttcg cgcggcggtc tccaaccgag tgcaggtcca
      841 ccgccagcac gtccacgcgg cggccgttca tcgccttcac cgtgaagatg gcatggctcg
      901 ccgtcacgcg atcccccgcg acgggcaggc ggccgagcgc gccgaacacg tagccgccga
      961 tcgtcgtgta ctcgtcgtcg gggacgtcga ggccgaaccg ctcgttcagc tcgtggagat
     1021 tcatcgagcc ggggatcagc acgtcggcgc ccggctccgc cgagtccagc acctccggct
     1081 cgtcgtactc gtcgaggatc tcgccgacga tctcctcgag caggtcctcc atcgtcacca
     1141 gccccgccgt gccgccgtac tcgtcgagca ccacggccat gtgctccttc aaccgcttga
     1201 agtcggcgag cacctcttcc acctcgcgcg agccgggcac gacgtggatc ggccgcatca
     1261 cccgcgtcat cgtgaagtcc tccggcgcgt cgcggagcag cgggatgaag tccttcgcca
     1321 gcacgagccc cacgacgttg tcgatcgact cctcgtacac cggatagcgc gagcgctggg
     1381 tctcgatgat cgtcgatacc gcctcgtcca gcgtggcctc gatgtccagc gcgtcgatcg
     1441 ccgtgcgcgg cgtcatcacc tcgcgggcgt tcttctccga gaactcgaac actccctcga
     1501 tcagcgccgc gtcctgccgc tccagcaccc ccacttcctg gctctgctcc acgaggatcc
     1561 ggagctcgtc ggccgagtgc acgttctcct ccgcgctcac gggcgactgc cggaacaggc
     1621 gcagcaccag gtcggcggag tggttcagca gccaggtgaa cggggtggtg atccaggcga
     1681 acaccatgag gggcggtacg agccaccgcg agacctcctc ggggtggttc agggccgcgc
     1741 tgcgcggcgc cagctcgccg aacacgacgt ggccgtaggt caccaccgcc atcgcgcaca
     1801 ccgtgcccac cgtggccgcg ctgatgcgca gcggcaccga cagcgccgcg aacgactggg
     1861 cgaaggtgtg cgccagcgtc tcctcggcca ggacgccgat gccgatgctg gcgagcgtga
     1921 tcccgaactg gctgaccgag agaagccgcg ccatactggc ggtcgccttg agcaccagtc
     1981 gcgccttggc gtcgcccgcc cgggccatgg cctcgaggcg ggaacggcgg gagcgcacca
     2041 ccgagaattc cgccgccacg aagaagccgt tggccgcgag gagcccaatc agggcgagga
     2101 ttcgtccgag cacgcgcgga acgtaacggc cttccgacgc ccaagccact ggttggcaac
     2161 aacttgatct tctggccgca gcggccgaca ctctacctga tgagcgacgc catgagcgac
     2221 tcgatgagcg actaccggat cgaaaaggtc cggcacgggg tcgaggtcac cctcaccaac
     2281 ggccaccggc tggacggaga tgtcttcgtc cagagctcca cccggttccg gcccgggccc
     2341 gaggagccgc tcgacctgct gaacgatgac gaacccttcc tcccgctcgt cctcatgacg
     2401 ggcgcggtct acctcgtcca gaaggcgcag atcgccgtcg tgggcacccg gcttcccgag
     2461 ggcgacgatg ccgtcgaccg ggccgtcgtc ggaatgaaga cggagctcac gctcgtggac
     2521 ggcagcaccc acgtcggctc gatcttcccc gaggtgcgag ccaatcggca gcgactgatc
     2581 gacgccctga acgacttgtc cgctcccttc gtcgccctgt tcaccgccga gcagctccgg
     2641 ctggtgaacc gccgccatat cgcgtacgtc cgccccgtga actgagtcgc atgccccagc
     2701 tcgaccgcct cctgtccgtg atggtgagcc agcgcgccac cgctctcaag ctgcacgaga
     2761 gcgagctggc cgagctcgag atcgccgggg ctccgcgtcc gatgacgaag accgccctca
     2821 ccagccagca ggtggtctcg ctgctgcgcg agatcgcgcc cgcggatgcc gcggcgcggc
     2881 tcgacgcggg ccaggccacc cagttcgact acgtctcgga ggacggcgcg ttctgcatcg
     2941 acgccgcgcg cgacggcgcg cagtggcgcg cgcgcgtcac cctggacgag cggcgcgagc
     3001 ggcagcggct gaacggccat ccgcgccccg acatccccca gtacgccgcg cccacgccca
     3061 cggccgcggc gcccgccgcc gcccaccctc ccgcgccgcc ggcgccggcg tcccctgccg
     3121 ccgtcgtggc tccgccgccg gcggccagcg acggtgatgc cgtgaacgcg ttccccggca
     3181 gcgagcgggc gcgcgccgcg
//
LOCUS       DASSYW010001202         3686 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_880139, whole genome shotgun sequence.
ACCESSION   DASSYW010001202 DASSYW010000000
VERSION     DASSYW010001202.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3686)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3686)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3686
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_880139"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            331..600
                     /locus_tag="VFN38_18940"
     CDS             331..600
                     /locus_tag="VFN38_18940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013913.1"
                     /translation="MEQSEEDGFDIPTFVDDTQRRWEVRAIRDPLLPARTSVLAPPEF
                     SQGWLLFTSDGERRRLAPLPPGWRQAPEAQLRRWCADAAPARNTS"
     gene            722..1021
                     /locus_tag="VFN38_18945"
     CDS             722..1021
                     /locus_tag="VFN38_18945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013914.1"
                     /translation="MALRVYKDPDGGEWRVWRVVPDSISFSTLGESYRDGWLCFERVD
                     GSERRRLAMSRVPADWDAMSDDLLENLRRTAEPATRRWAATSTESNAGRRDKGHR"
     gene            complement(1026..2348)
                     /locus_tag="VFN38_18950"
     CDS             complement(1026..2348)
                     /locus_tag="VFN38_18950"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HET9013915.1"
                     /translation="MRADVVVIGAGVAGLAAARRLHEQGLRVVVLEARDRIGGRVFTQ
                     RDSRASLPIELGAEFLHGEAPEVRAIADNARLTPVDIVGGRWHAAHGRFTCIDDFWDR
                     LDRVLRHADAARVPDRPIAALFAERPGGHRFAADRSLAREFVEGFHAAELDRISERSI
                     ADGGNPGADEEEQRLARLIGGYDAVPSWLAAPIASQIRLGVIASAVEWSPGRVVVRGR
                     SGDSAMTVRARAAVVTVPVSLLRAGARGRGAITFAPEVEPIRVAASTVEMGQVQRVAV
                     LLDRPLIELLATRRRTMLARAAFVHARGAEVPVWWTSYPLRSGLLVGWAGGPAAMALG
                     ASPASLRGRVLRSLADTFGADRRTLDRHLVGTFHHDWSRDPFSRGAYSYALVGGSDAA
                     ATLARPLRGTLFFAGEATDPEGRTGTVHGAIATGHRAASQLRRAQHLR"
     gene            complement(2355..>3686)
                     /locus_tag="VFN38_18955"
     CDS             complement(2355..>3686)
                     /locus_tag="VFN38_18955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013916.1"
                     /translation="QRLFSDAVLLAQRCDASGGVGLVLRTRDTWTLRPTARLRSTSAL
                     SLGVEERNLFGTGRTVSVTSEMSKWGTGAAVALVDPWLFGSDVEGSMRLAKLGGAHSM
                     RLGLRNHEYSVFDRWRAEGSLSRLSYADTGGAERSLHALRGGVLVGRQVARSATAITM
                     LLAGAEFDSAAAISPSRRMVPGAPASTPHVRSFLGADVGVLHRTAQYDTASWVVPGRG
                     FLDVPLGWEADGVLGAGYERDARTPALKLDAWLGRVWIPSRGRVVMVDAWGSGYAGRG
                     VDANHIVRLSAAWYEEGWRGMWGARATAERLRELDPDLRALSLMPLADYTAPAVRPYT
                     VRGGESVTGSLERAFHLFRVGAASVVDAGAFVAGSSRWHVADVPDGVLHAGVVGARLR
                     LLAANGAVSSVRADIGYPVMLSDVLPRKPFVVLTVGTLFDVSRQRDGRRGL"
BASE COUNT          551 a         1361 c         1329 g          445 t
ORIGIN      
        1 gctcgaagac ggtggtggtg tcgatcccgg gggcggcggc ccgcagcgcg gccagcgcct
       61 ccgcgcgact cggtgcgggt ttgcaggccg gaatggcgag tgcgctgacg aagaaggcga
      121 gccgaagcgt ggacgtgcgg acgtgcattg tcttccatgc catgcgaggg ccgttccatc
      181 ccgcgccggc agtcagggtg ccggtctcgc cgaagcccgg atcaaaggtg tgacgcatcg
      241 caccggcttt tcgtgccgtc tctcacgaaa cgcacgaacc ttgcaacagg tgcctcgcgg
      301 cgcagccgac attcccgcac gagccgagcg atggagcaga gcgaagaaga cgggttcgac
      361 attcccacgt tcgtggacga cacccagcgg cgctgggaag ttcgcgccat ccgcgatcca
      421 ctcctgccgg cccgcacctc cgtgctggcg cctccggagt tttcgcaggg ctggctcctg
      481 ttcacgtcgg acggggagcg ccgccggctc gcgccgctcc cgccgggctg gcgccaggcc
      541 cccgaggcgc agctccgtcg ctggtgcgcc gacgccgccc cggctcgaaa cacctcctga
      601 cgtcggccgt cgtcgctcca ctcgttcata catgaacggt acgtgacttg cccgatggcc
      661 gtgcaaccgt cgggctcgca ggcgtgcgtg tcgccccgac ggaatcacgg tcgaggggac
      721 gatggctctt cgagtctaca aggatccgga cggcggggaa tggcgcgtgt ggcgcgtcgt
      781 gcccgattcc atcagcttct ccaccctcgg tgaatcgtat cgcgacgggt ggctctgctt
      841 cgagcgcgtc gacggaagcg agcgccgccg gctcgcgatg tcgcgggtgc cggcggactg
      901 ggacgcgatg tccgacgacc tgctcgagaa tctccgccgc actgccgagc cggcgacgcg
      961 acggtgggcc gcgacgtcga ccgagagcaa cgcgggccgc cgcgacaagg ggcaccgctg
     1021 agccgtcagc gcagatgctg ggcgcggcgc agctgtgacg ccgcacggtg gcccgtggcg
     1081 atggcgccgt gcacggtgcc ggttcgcccc tcgggatcgg tcgcttcgcc ggcgaagaac
     1141 agcgtgccgc gcagtggtcg cgcgagcgtc gccgccgcat ccgatccgcc gacgagcgca
     1201 tagctgtacg cgccgcgact gaacggatcg cgcgaccagt cgtgatgaaa ggtgcccacc
     1261 agatgccggt cgagcgtgcg tcgatccgcg ccgaaggtgt cggcgagcga ccggagcacg
     1321 cgtccccgca acgaggctgg tgacgcgccc agcgccatcg cggcggggcc gccggcccag
     1381 cccacgagca ggccggagcg cagcggatac gacgtccacc acacgggtac ctcggcgccc
     1441 cgcgcgtgca cgaacgcggc gcgcgcgagc atcgtccggc gtcgcgtcgc gaggagctcg
     1501 atcagcggcc gatcgagcag gacggcgacg cgctgcacct gccccatctc caccgtcgac
     1561 gcggcgacgc ggatcggctc gacctccggc gcaaaggtga tcgcgcctcg gccgcgcgcg
     1621 ccggcgcgga ggagcgagac gggcacggtg acgaccgcgg cgcgcgcgcg caccgtcatc
     1681 gcggagtcgc ccgatcgacc gcgcacgacc actcgtccgg gcgaccactc gacagccgac
     1741 gcgatcacgc cgagtcgtat ctgcgacgcg atgggcgcgg cgagccacga cggcaccgcg
     1801 tcgtagccgc cgatcagccg cgcgagacgc tgctcctcct cgtcggcgcc gggattgccg
     1861 ccgtcggcga tggaccgctc gctgatgcgg tcgagctccg cggcgtggaa tccctccacg
     1921 aactcgcgcg ccagcgagcg atccgcggcg aaccgatgcc cacccggccg ctcggcgaag
     1981 agggcagcga tcggacggtc gggaacgcgc gcggcatcgg cgtgccggag cacgcgatcg
     2041 aggcgatccc agaagtcgtc gatgcaggtg aagcgaccgt gcgccgcgtg ccatcgtccc
     2101 ccgacgatgt ccaccggcgt cagccgcgcg ttgtcggcga tcgcccgcac ctcgggcgct
     2161 tcgccgtgca ggaactcggc gcccagctcg atgggcagcg acgcgcgcga gtcacgctgg
     2221 gtgaagacgc ggccaccgat gcgatcgcgc gcctcgagca cgacgacgcg taggccctgc
     2281 tcgtgcagcc gtcgcgcggc ggcgaggccg gccacgcccg cgccgatgac gacgacgtca
     2341 gcgcgcacgc gccctcagag cccgcggcgg ccgtcgcgct ggcggctcac gtcgaacagc
     2401 gtgccgacgg tgagcacgac gaacggcttc cgcggcagca cgtcgctcag catcacggga
     2461 tagccgatgt cggcgcgcac gctgctgacc gcgccgttgg ccgccagaag ccggagccgc
     2521 gcacccacca cgccggcgtg cagcacgccg tcgggcacgt cggcgacatg ccagcgggac
     2581 gagccggcca cgaacgcgcc cgcatccacg accgacgcgg cgccgacgcg aaacaggtgg
     2641 aaggcgcgct cgagggatcc ggtcacgctc tcaccgccac gcacggtgta gggacgaacc
     2701 gccggcgcgg tgtagtcggc gagcggcatc agcgacagcg cgcgcaggtc cgggtccagc
     2761 tcgcgcagtc gctccgcggt ggcgcgcgcg ccccacatgc cccgccagcc ctcttcgtac
     2821 cacgccgccg agaggcgcac gatatggttg gcgtccacgc cgcgtcccgc gtagcccgat
     2881 ccccaggcgt ccaccatcac gactcggccg cgcgacggga tccacacgcg cccgagccac
     2941 gcgtcgagct tgagcgccgg cgtgcgcgca tcccgctcgt agccggcgcc gagcacgcca
     3001 tcggcctccc agccgagcgg cacgtcgagg aagccgcgcc cgggcacgac ccagctcgcg
     3061 gtgtcgtact gcgcggtgcg gtgcagcacg ccgacgtcgg caccgagaaa gctccgcacg
     3121 tggggcgtgc tggccggcgc acccgggacc atgcggcgcg acggcgagat ggccgcggcg
     3181 ctgtcgaact ccgcgcccgc gaggagcatg gtgatggccg tcgcgctgcg ggcgacctgt
     3241 cgtcccacga gcacgccgcc gcgcagcgcg tgcagcgaac gctccgcccc gccggtgtcg
     3301 gcgtacgaga ggcgcgagag gctgccttcg gcgcgccagc gatcgaacac gctgtactcg
     3361 tggttgcgca gccccaggcg catgctgtgg gcgccgccca gcttggcgag ccgcatgctg
     3421 ccttccacgt cggagccgaa gagccaggga tccacgagcg cgacggccgc gcccgtcccc
     3481 cacttcgaca tctcgctcgt gacggagacg gtgcgaccgg tgccgaagag gttgcgctcc
     3541 tccacgccca gcgagagcgc gctcgtgctg cgcagccggg cggtgggacg cagcgtccac
     3601 gtatcgcgcg tgcggagcac gaggcccacg ccgccggacg cgtcgcagcg ctgcgccagc
     3661 agcacggcgt cggagaagag acgctg
//
LOCUS       DASSYW010001203         2914 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1138285, whole genome shotgun sequence.
ACCESSION   DASSYW010001203 DASSYW010000000
VERSION     DASSYW010001203.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2914)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2914)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2914
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1138285"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(147..1373)
                     /locus_tag="VFN38_18960"
     CDS             complement(147..1373)
                     /locus_tag="VFN38_18960"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HET9013917.1"
                     /translation="MATTAVSEQRALQPEDRVLSGLSGRPLRIAICLDGMGVGGTELN
                     TVRTLERLPRERFDVTLVSLSGEGPLRERFEAAGVRIAPFPLSGLFSRDALRQGARLR
                     RLLRERQIEIVHSQDMYSNVFATAAARAAGTPVVITSRRWHAFERLAFRAANMAAFHV
                     SDCVVANSPLVASLTRRDELVPTRRLAVVPNFVDDAAFDAPSAADRERFRSELGVPGD
                     ALVVGVVANLWKEKDQATLVRAVASLGARTPAVHVVLVGEGPLRPALTALAESLGVAD
                     RLHLAGRRPQLPNLQHHFDVSALTSITEGFPNSLLEAMAAARPVVATDVGGVRDAVED
                     GVTGYVVPARGVDALAAAIGRLLDDPALRTRLGAAGRARAIERHSPAVALATLERLYR
                     SLLERAGARARPAGAR"
     gene            complement(1431..2291)
                     /locus_tag="VFN38_18965"
     CDS             complement(1431..2291)
                     /locus_tag="VFN38_18965"
                     /inference="COORDINATES: protein motif:HMM:NF014453.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HET9013918.1"
                     /translation="MDAVLSQRITTDRLMERRPQPATREGRSSGRVAAAAAFEPAATD
                     VEVPVPLVLAGDAACPLPAPMHQIAEPSETTELAIRIVNVTVAIVGLVLLLPVLLAVA
                     LAVKLSSRGPVFYTQTRVGVDRRWRLRRASADQRQQDLGGRPFTIFKFRSMTVDAERE
                     GRAVWATQNDARVTSVGRVLRRTRLDELPQLLNVIRGDMNIVGPRPERPSIFAQLRQD
                     IPEYPLRQRARPGITGWAQINQAYDACVEDVRRKVQYDLEYLERRGVAEDVKIMLKTI
                     PVMLFKRGGW"
     gene            complement(2304..>2914)
                     /locus_tag="VFN38_18970"
     CDS             complement(2304..>2914)
                     /locus_tag="VFN38_18970"
                     /inference="COORDINATES: protein motif:HMM:NF022007.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SLBB domain-containing protein"
                     /protein_id="HET9013919.1"
                     /translation="SLEAAGKRAEAAEVRRRLAEGDFPVGDRIVLDVTGSLVFRDTLP
                     IRSGQVITVATLPDISLRGVLRPELNDYLTGQIGRYVRDPVVHAQSLVRVTVSGPVAR
                     PGFYSMPADILLGDAIMRAGGPTPDTDMGRTVVKRGKSETLSRSAVQRAIRDGATLEQ
                     AGVRAGDEIVVGKRRSINYTQVLIVSASVLGSIVAVASLIHR"
BASE COUNT          418 a         1039 c         1096 g          361 t
ORIGIN      
        1 gccgcgccac ggcgggtgag cgccgcgcgc gacgacccag cgcccggcgc accagcgccc
       61 ggcgcaccag cgcccggcgc gatcggaggc tgtggcgccc ccgctccccg ccgcatcgag
      121 cgccagccct cgctgggccg ccgcacctaa cgcgcccccg cgggccgcgc acgcgcgccg
      181 gcgcgctcga gcagcgagcg gtacagccgc tcgagcgtcg ccagcgcgac ggctggcgag
      241 tgccgctcga tggcgcgggc ccggcccgcc gctcccaggc gcgtccggag cgcggggtcg
      301 tcgagcaggc ggccgatcgc cgcggcgagc gcgtccaccc cgcgcgccgg cacgacgtag
      361 ccggtgacac cgtcctccac cgcgtcgcgc acgccaccga cgtcggtcgc gacaaccggg
      421 cgcgccgcgg ccatcgcctc gagcaggctg ttggggaatc cctcggtgat cgaggtcagc
      481 gccgagacgt cgaagtggtg ctgcaggttg ggaagctgcg gacggcgccc cgccaggtgg
      541 agccgatcgg cgacgccgag cgactcggcg agcgccgtga gggcgggacg gagcggtccc
      601 tcccccacga ggacgacgtg gaccgccggc gtgcgcgcgc cgaggctggc caccgcgcga
      661 acgagcgtcg cctggtcctt ctccttccac agattcgcca ccacgccgac gacgagcgcg
      721 tcgccgggca ctcccagctc gctccggaag cgctcgcgat cggcggcgct cggggcgtcg
      781 aacgccgcgt cgtccacgaa gttcgggacc accgcgagcc ggcgcgtcgg cacgagctcg
      841 tcccggcgcg tcagggacgc gacgagcgga ctgttggcca ccacgcagtc ggagacgtgg
      901 aaggcggcca tgttcgcggc gcggaaggca agacgctcga aggcgtgcca gcggcggctc
      961 gtgatcacca ccggagtgcc ggcggcacgg gcggcggccg tcgcgaacac gttggaatac
     1021 atgtcctggc tgtggacgat ctcgatctgg cgctcgcgca gcagccggcg gagcctggcg
     1081 ccctgccgaa gggcgtcgcg cgagaagagg ccggagaggg ggaagggcgc gatccggacc
     1141 ccggcggcct cgaagcgctc gcgcaggggg ccctcgccgg agagcgagac gagcgtgacg
     1201 tcgaagcgct cgcgggggag gcgctcgagc gtccgcaccg tattcagctc ggtgcccccc
     1261 acccccatgc cgtcgaggca gatggcgatc cgcagtgggc gcccggaaag gccggagagg
     1321 acacggtctt cgggctggag cgcgcgctgc tcgctgactg cggtcgtcgc catgctccaa
     1381 tctaacgccg ggcggacccc gtcccgaagg cgacggaggt ccgggggcgt ctaccagccg
     1441 ccgcgcttga agagcatcac cgggatcgtc ttgagcatga tcttgacgtc ctcggcgaca
     1501 ccgcgccgct ccaggtattc gaggtcgtac tgcaccttgc ggcgcacgtc ctcgacgcag
     1561 gcgtcgtacg cctggttgat ctgcgcccag ccggtgatgc cggggcgggc gcgctggcgg
     1621 agggggtact ccgggatgtc ctgccgcagc tgggcgaaga tgctcggacg ctccggacgc
     1681 gggccgacga tgttcatgtc gccgcggatc acgttcagga gctgggggag ctcgtcgagc
     1741 cgcgtgcggc ggaggacccg gcccaccgag gtgacgcgcg cgtcgttctg ggtcgcccag
     1801 accgcgcgcc cctcacgctc ggcgtccacc gtcatcgagc ggaacttgaa gatcgtgaac
     1861 ggccggccgc ccagatcctg ctgccgctga tcggccgagg cgcgccgcag ccgccaccgg
     1921 cggtccacgc ccacgcgcgt ctgcgtgtag aacaccgggc cgcgcgacga gagcttgacg
     1981 gcgagggcga cggcgagaag gacgggaagc agcaacacca ggccgacgat ggcgaccgtg
     2041 acgttgacga tccggatggc cagctcggtc gtctcgctgg gctcggcgat ctggtgcatc
     2101 ggggcgggaa gcgggcaggc ggcgtcgccc gcgaggacga gcggcaccgg cacctcgaca
     2161 tcggtggcgg caggctcgaa ggcggccgcc gcggccacgc ggccggagct acgtccctcg
     2221 cgtgtcgccg gctgcggacg acgctccatg aggcgatcgg tggtgatgcg ttgcgagagg
     2281 actgcgtcca ttattctgcc gtgctaccgg tggatgagtg aggcgaccgc cacgatcgaa
     2341 ccgagcacgc tcgcggagac gatcaacacc tgcgtgtagt tgatgctcct ccgcttgcct
     2401 accacgatct cgtctcccgc gcggaccccc gcctgctcga gcgtcgcgcc gtcccggatc
     2461 gcccgctgga ccgcgctgcg ggaaagcgtc tcggacttgc cacgcttcac caccgtgcgc
     2521 cccatgtcgg tgtccggggt gggaccgccg gcgcgcatga tggcgtcgcc gagcaagatg
     2581 tcggccggca tggaatagaa gccgggtcgc gcgaccgggc cgctgaccgt gacccggacg
     2641 agcgactggg cgtggaccac ggggtcgcgg acgtagcgcc cgatctgccc cgtcaggtag
     2701 tcgttgagct ccggccggag cacgccgcgc agggagatgt cggggagggt cgccaccgtg
     2761 atcacctggc ccgagcggat cggcagggtg tcgcggaaga cgaggctacc ggtcacgtcg
     2821 agcacgatgc ggtcgccgac cggaaaatcg ccctcggcga gccggcggcg cacttccgcc
     2881 gcctcggcgc gctttcccgc ggcctcgagc gagg
//
LOCUS       DASSYW010001204         4083 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_180254, whole genome shotgun sequence.
ACCESSION   DASSYW010001204 DASSYW010000000
VERSION     DASSYW010001204.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4083)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4083)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4083
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_180254"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..528)
                     /locus_tag="VFN38_18975"
     CDS             complement(<1..528)
                     /locus_tag="VFN38_18975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013920.1"
                     /translation="MSARRLPNLVMERRWGGDVPIAERVLHSLGAHPSFAEALLGDLA
                     EERARRSREVGSVSAELWYFREALRAVPHLLLNALRHGGAPARARAMVVLMAVAAVPA
                     LVTLALLRDPPPARLVVDGQDGGEGGIVLNSLHPIQLAMRALDEEGRTLAKAEVSYQW
                     IGGAELPVTSNGIVTC"
     gene            complement(525..857)
                     /locus_tag="VFN38_18980"
     CDS             complement(525..857)
                     /locus_tag="VFN38_18980"
                     /inference="COORDINATES: protein motif:HMM:NF015513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HET9013921.1"
                     /translation="MTTSIGTLELSALLTVARLGDEAYGLAVRHDLSERTGRDYSVGA
                     IYTTLQRLEDKGLLTSRASEPLPVRGGRSRRHFRLTGAGARAIRDAERHAKSMWAGVG
                     TSMRPRPA"
     gene            complement(988..3351)
                     /locus_tag="VFN38_18985"
     CDS             complement(988..3351)
                     /locus_tag="VFN38_18985"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HET9013922.1"
                     /translation="MIPSRTTALWRDVFAAADRALEMAPEAQRAFVERCIAEDPALGA
                     ELKAVLDGGTSASTLELPASTFAASFLHDAMRHDPAAADADPIDSLRMFGPYRVLREL
                     GSGGMGAVYLAERSDEQYRKQVALKVLPRWSGDDRRRRQRFLDERQTLANLEHPGIAR
                     LLDGGVTADGLPWFAMEYVDGEHIDRYCESRHLSIEERLALFCDVCSAVQHAHRNLVV
                     HRDLKPANILVTSEGRVVLVDFGIARPPAMDAAKAAHTTGSLLLTPLYSSPELIRGEP
                     VSTSADVYALGVLLHTLLTGTNPYRLTSFEGYEVARAVLEQEPERPSVSAPDKARRLR
                     GDLDAIVLRAMAKDPARRYATVQELEADVRRHLTGLPVLARPDGRRYHAAKFLRRHRI
                     GASVTTLAVLLLATFAAVMTVQRARIQAQAEQIALERDRAERIGQNLLNIFRTVRPRE
                     NGMSPRDILDTAAAHVNESTVGNPEQRRRLMVGMAAAYRRVGETDRARRLLAPAAPGA
                     TEGASHIVFVTDRDGPDPLGNLGNQEIYVMNANGSDQRRLTNDPALDITPALSRDGRR
                     IAFTSQRAGGYDLFVMNVDGTEQRQVTHFADRGLGATRPTWSPDGERIAFNSWVKRVD
                     IYAVGVDGSGLVKLTDDPAGAHSAAWSPDGTRIAYVSRRDGHPEIFVMKADGSDPVRL
                     TVGDRGNRNPSWSPDSRRIAFQSMRDGGDVEIYVMNADGSDPRRLTSNPGEDSFPSWS
                     PDGRQIVFQRVVQGHGQLHVMNADGSNVRRLTEPSAVAFNAFANWGR"
     gene            complement(3356..3913)
                     /locus_tag="VFN38_18990"
     CDS             complement(3356..3913)
                     /locus_tag="VFN38_18990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012682686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HET9013923.1"
                     /translation="MGQPADITTQLRAWHAGDPSARERLFPLVYEELRRIAHRQLQRE
                     KTGHTLDTTALVHEAYLRLAGPTSRDFADRGHFFAMAATAMRRVLVDYARRYRTEKRG
                     AAPRRVSLTDTMLVAEERADTLLAVDEALEELGRIDPRLSRVVECRFFAGLTEEETAE
                     TLDVTARTVRRDWTKAKGWLLRKLG"
BASE COUNT          584 a         1429 c         1440 g          630 t
ORIGIN      
        1 gcaggtgacg atgccgttgg acgtcaccgg cagctccgcc ccgccgatcc attgatagct
       61 cacctccgcc ttcgccagcg tccgcccctc ctcgtccagc gcgcgcatgg cgagctggat
      121 cgggtggagc gagttgagca cgatcccccc ctcgccaccg tcctgtccgt cgacgacgag
      181 acgcgcgggg ggtggatcac gcagcagcgc gagagtcacg agcgccggca cggctgcaac
      241 ggccatgagc acgaccatcg cgcgggcgcg tgcgggcgcg ccaccgtgcc gcagcgcatt
      301 caacagcagg tgcggcaccg cacgcagcgc ctcgcgaaag taccagagct cggccgagac
      361 cgatccgact tccctggatc ttcgcgcgcg ctcctcggcg aggtcgccga gcaatgcctc
      421 ggcgaacgaa ggatgggcac cgagcgagtg cagcacgcgc tccgcgatcg ggacgtcgcc
      481 gccccaccgc cgctccatga cgaggttcgg gagccgccgc gcgctcatgc gggcctcggg
      541 cgcatgctcg tgccgactcc ggcccacatc gacttcgcat gccgttcggc gtcgcgaatc
      601 gcgcgggccc ctgccccggt cagtctgaag tgccgacgcg agcgcccgcc gcgcaccggc
      661 agcggctcgc tcgcgcgcga tgtgagcagt cccttgtcct ccaggcgctg aagggtcgtg
      721 tagatcgcgc caacggagta gtcgcgtccc gtgcgctcgc tgaggtcatg gcgcacggcc
      781 aggccgtacg cctcgtcgcc gaggcgggcg accgtgagga gtgcggacag ctcgagggtg
      841 ccgatggagg tcgtcataag tcctagtttg tagaacaaat accgacggcg caagtgcggt
      901 aggtcgctgc gctcagggca ggcgctgcgc tcgcgacgac gcgtgtcgtc ctgagccgga
      961 ggcgaaggac ctgaacctgt cttctcccta tcgtccccag tttgcgaagg cgttgaacgc
     1021 caccgccgac ggctcggtga gccgacgcac gttgctcccg tcggcgttca tgacgtgcag
     1081 ctgcccatgc ccctgcacca cccgctgaaa cacgatctgg cgtccgtcgg gagaccagga
     1141 gggaaagctg tcctcgccgg gattcgacgt gaggcgccgc gggtcgctgc catcggcgtt
     1201 catgacgtag atctccacgt cgccaccgtc gcgcatgctc tggaaggcga tgcggcggct
     1261 gtcgggcgac caggacggat ttctgttccc ccggtcgccc acggtgagtc gcaccgggtc
     1321 gctgccgtcg gccttcatga cgaagatctc cggatggccg tcgcgtctgc tcacgtaggc
     1381 gatccgtgtc ccatccggtg accatgcggc cgagtgggcg ccggcgggat cgtccgtcag
     1441 cttcaccagt ccgctgccgt ccacgccgac ggcgtagatg tcgacccgct tgacccagct
     1501 gttgaacgcg atccgctcgc catcgggcga ccacgtcggc ctggtcgcgc ccaatcctcg
     1561 gtcggcaaag tgcgtgacct gccgctgctc cgtgccatcg acgttcatca cgaagaggtc
     1621 gtagccgccc gcccgctggc tggtgaaggc gattcgccgg ccgtcgcgcg acagagcggg
     1681 ggtgatgtcg agcgccgggt cgttcgtcag tcgccgttga tcgctgccat tggcgttcat
     1741 gacgtagatc tcctggttgc cgaggttgcc gagtggatcc gggccgtcgc gatcggtgac
     1801 gaagacgatg tgcgacgcgc cttccgtcgc gcccggcgca gcaggcgcga ggagccggcg
     1861 ggcgcggtcg gtctcgccga ctcgacggta ggcggcggcc atccccacca tcagccgccg
     1921 gcgctgctcc ggatttccca ccgtcgactc gttcacgtgc gccgccgcgg tgtcgaggat
     1981 gtcgcgcggc gacatgccat tctcgcgcgg ccgcaccgtg cggaagatgt tgagcaggtt
     2041 ctggccgatg cgctcggcgc ggtcgcgctc gagggcgatc tgctccgcct gcgcctggat
     2101 gcgcgcgcgc tgcacggtca tcaccgcggc gaaggtggcg aggaggagga ccgcgagcgt
     2161 cgtgaccgac gcgccgatgc gatggcgccg caggaacttc gccgcgtggt agcggcggcc
     2221 gtccggccgt gcgagcacgg ggagcccggt gaggtgtcgt cgcacgtcgg cctcgagctc
     2281 ctgcaccgtc gcgtaccggc gggcgggatc cttcgccatc gcccggagga cgatggcgtc
     2341 gagatcgccg cgcaggcgcc ttgccttgtc cggcgccgac accgacggcc gctcgggctc
     2401 ctgttcgagc actgcgcgcg cgacctcgta gccctcgaag ctcgtcagcc gatatgggtt
     2461 ggtgccggtg agcagtgtgt gcaacagcac gccgagcgcg tagacgtcgg cagaggtgga
     2521 gacgggctcc ccgcggatga gctccgggct ggagtagagt ggcgtcagca gcagtgagcc
     2581 cgtggtgtgc gcggccttcg ccgcgtccat cgccggcggc cgcgcgatgc cgaagtccac
     2641 cagcacgacg cgcccctcgc tcgtcacgag aatgttcgcc ggcttgagat cgcggtgcac
     2701 gacgaggttg cgatgcgcgt gctgcacggc cgagcagacg tcgcagaaaa gcgcgagccg
     2761 ctcctcgatc gacaggtggc gcgactcgca gtaccggtcg atgtgctcgc cgtcgacgta
     2821 ctccatggcg aaccagggga ggccgtcggc ggtcacgccg ccgtcgagca gccgcgcgat
     2881 gccggggtgc tcgaggttcg cgagcgtctg ccgctcgtcg agaaagcgct ggcgccggcg
     2941 ccggtcgtcg ccgctccagc gcggcaacac cttgagcgcc acctgcttcc gatactgctc
     3001 gtccgaccgt tcggcgagat acacggcccc catcccgccg gagcccagct cgcgcagcac
     3061 gcgatacggg ccgaacatcc gcagcgaatc gatcggatcg gcgtccgcgg cggccggatc
     3121 gtggcgcatc gcgtcgtgca ggaaggacgc ggcaaaggtc gatgccggca gctcgagcgt
     3181 cgacgcgctg gttccgccat cgagcaccgc cttcagctcc gcgcccagcg cgggatcctc
     3241 ggcgatgcac cgctccacga acgcccgctg cgcctcgggc gccatctcca gcgcgcggtc
     3301 ggcggcggcg aacacgtcgc gccagagcgc cgtcgtacgc gacgggatca tgtcgtcatc
     3361 cgagcttccg gaggagccac cccttcgcct tggtccagtc acggcgtacc gtgcgcgcgg
     3421 tgacgtcgag cgtctccgcc gtctcctctt cggtgagacc ggcgaagaag cggcactcca
     3481 cgacgcggct gagccgcgga tcgatgcgcc cgagctcctc cagcgcttcg tccaccgcga
     3541 gcagggtatc ggcgcgctcc tcggccacga gcatcgtgtc ggtgaggctc acccgacgcg
     3601 gcgccgcgcc gcgcttctcc gtgcgatagc gccgcgcgta gtccacgagc acgcggcgca
     3661 tcgccgtggc cgccatggcg aagaagtggc cgcgatcggc aaagtcgcgg gacgtcgggc
     3721 cggccagccg caggtaggcc tcgtgcacca gcgccgtcgt gtcgagcgtg tgacccgttt
     3781 tctcgcgctg gagctgtcga tgggcgatcc gccgcagctc ctcgtacacg agcggaaaga
     3841 gacgctcccg tgccgaggga tcgcccgcgt gccacgcacg gagctgggtg gtgatgtccg
     3901 ctggctgtcc catgcgcggc ggtccccccg ggtgacgtcg agggcatcaa catggggccg
     3961 ccgaggaatt ccggcaattc atggtcgtcg gggtgcgctc cgatcgaaag gcgtgaccgg
     4021 cggccgaagg cggacattcg gggcgcgtgt ccgcatttgc ggccggatcg cgctgttggg
     4081 gtc
//
LOCUS       DASSYW010001205         2261 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1212125, whole genome shotgun sequence.
ACCESSION   DASSYW010001205 DASSYW010000000
VERSION     DASSYW010001205.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2261)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2261)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2261
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1212125"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(27..1439)
                     /locus_tag="VFN38_18995"
     CDS             complement(27..1439)
                     /locus_tag="VFN38_18995"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HET9013924.1"
                     /translation="MQRTRLSFWQMFNMSFGFLGIQFGWGLQLANMSAVYEKLGARPD
                     QVPALWLAAPLTGLIIQPIIGAMSDRTWGRFGRRRPYFFVGAVLASIALYFMPTSGTL
                     WMAAGLLWILDASVNISMEPFRAFVADKLIVSQRTAGFVVQSFFIGVGASLANALPLV
                     LSKLGVAGTTASGIPLTVKYSFQIGAVVFLACVLWTVFTTDEFPPENLDEWKREKAAP
                     YRPGDVIREIVTAVREMPVTMKQLAVVQLFTWLGLFCMWLFFVPATARHVFGATDPQS
                     ALYTQGIEWGGFAFAFYSITCFLVAFALPKLAARIGRKATHAFALTCGAVGLLSLYVI
                     HDKYILLLTMVGVGIAWASILSMPYAILSTALPAKRMGVYMGVFNFFIVIPEIVASLG
                     FGPLIRVLFGKDNPNAPLYVVMLGGICLLTAAACVSLVREVVVGDGSDRDVIRADETE
                     PFLVPESVQPVPSTGLLDKP"
     gene            complement(1515..2036)
                     /locus_tag="VFN38_19000"
     CDS             complement(1515..2036)
                     /locus_tag="VFN38_19000"
                     /inference="COORDINATES: protein motif:HMM:NF025887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HET9013925.1"
                     /translation="MRPIFLPEVEQSPARGNYAGPLSGMRGAVALVLLAVVATSAPAQ
                     RPGRDSRSTPVARALIALEDGWARGVVRRDTAMFRRLLHPRFVYTEDATVMTADEVIA
                     SIRDGDRVDRATNADMVVHEHGGTAVVTGILRLEGRGKDGAFDRRYRFTDTWLRTGGR
                     WRIIAAQDYLIPR"
BASE COUNT          400 a          716 c          827 g          318 t
ORIGIN      
        1 tcgctccgct cgtgcgggat gacaaatcag ggtttgtcga gcaggccggt gctggggacg
       61 ggctgcacgg actcggggac gaggaagggc tccgtctcgt cggcccggat cacgtcgcgg
      121 tcgctgccgt cgccgaccac gacctcgcgc accagggaga cgcacgccgc ggcggtgagc
      181 aggcagatgc cgccgagcat cacgacgtac agcggcgcat tcgggttgtc cttgccgaac
      241 aggacccgga tgagcgggcc gaagccgagc gacgcgacga tctcggggat gacgatgaag
      301 aagttgaaca cgcccatgta gacgcccatc cgctttgccg gcagcgcggt ggagaggatg
      361 gcgtagggca tggagaggat cgacgcccag gcgatgccga cgccgaccat ggtcagcagc
      421 aggatgtact tgtcgtggat cacgtagagc gacaggagcc cgacggcgcc gcaggtgagg
      481 gcgaaggcgt gcgtcgcctt gcgaccgatg cgggcggcga gcttgggcag ggcgaaggcg
      541 acgaggaagc aggtgatgga gtagaaggcg aaggcgaagc cgccccactc gatcccctgg
      601 gtgtagaggg ccgactgcgg atcggtggcg ccgaacacgt gccgcgccgt ggcgggcacg
      661 aagaacagcc acatgcagaa caggccgagc caggtgaaga gctgcacgac ggcgagctgc
      721 ttcatggtga ccggcatctc gcgcacggcc gtgacgatct cgcgaatcac gtcgccggga
      781 cggtacggcg ccgccttctc gcgcttccac tcgtcgaggt tctccggcgg gaactcgtcg
      841 gtcgtgaaga cggtccacag cacgcaggcg aggaagacca cggcgccgat ctggaacgag
      901 tacttcacgg tgagcgggat gccgctcgcc gtggtgccgg cgacgccgag cttgctcagc
      961 acgagcggga gggcgttggc gaggctggcg ccgacgccga tgaagaacga ctgcacgacg
     1021 aagcccgccg tgcgctggct gacgatcagc ttgtccgcga cgaaggcgcg gaagggctcc
     1081 atcgagatgt tgaccgacgc gtccaggatc cagagcaggc cggccgccat ccacagcgtg
     1141 cccgacgtgg gcatgaaata gagcgcgatg gacgccagca ccgcgccgac gaagaagtac
     1201 ggccggcgac gcccgaaccg tccccacgtg cgatcgctca tcgcgccgat gatcggctgg
     1261 atgatgagcc ccgtcagcgg cgcggcgagc cagagggcgg gcacctgatc ggggcgcgca
     1321 ccgagcttct cgtacacggc ggacatgttg gcgagctgga gcccccagcc gaactggatg
     1381 ccgaggaagc cgaagctcat gttgaacatc tgccagaaac tcaggcgcgt tcgctgcatc
     1441 acggactcca cggggcgggc ggagcacgaa gttggcgctg gagccgccgt ttgtgaagga
     1501 ggtgccgagc gctcctatct cgggatcagg tagtcctgcg cggcgatgat gcgccaccgc
     1561 ccgccggtgc gcagccaggt gtcggtgaag cggtatcgcc gatcgaaggc gccatccttt
     1621 ccacggccct cgaggcgcag gatgcccgtc accacggcgg tgccgccgtg ctcgtggacg
     1681 accatgtcgg cgttcgtggc gcggtcgacg cggtcgccgt cccggatcga ggcgatcacc
     1741 tcgtccgcgg tcatcaccgt cgcgtcctcg gtgtagacga agcgcgggtg caggagtcgc
     1801 cggaacatcg cggtatcccg gcgcacgact ccccgcgccc aaccgtcctc cagcgcgatg
     1861 agggcgcggg cgacgggagt ggaccgggaa tcccgccccg gacgctgggc cggagcggag
     1921 gtggccacaa cggcgagcag gacgagcgcg acggcgccgc gcatcccgct gaggggcccg
     1981 gcgtagttgc ccctggctgg cgactgctcg acttcgggga gaaagatcgg cctcattttc
     2041 ctccatcccg ttcgaggttc ttctccgtgg cctccgttga atcgcgccag ccggtggaag
     2101 agctttcacc gcggaggccg cagaggaacg cggaggactg cccggggaaa tcatacgaca
     2161 atgctccgcg ggccgcgaat gggtgggcgg ttgctgcgcg gtggatcgcc gagctacgat
     2221 tgtggccccc gacttcccgg tcttcctcat gtcgccagca t
//
LOCUS       DASSYW010001206         2235 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_581451, whole genome shotgun sequence.
ACCESSION   DASSYW010001206 DASSYW010000000
VERSION     DASSYW010001206.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2235)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2235)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2235
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_581451"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..650)
                     /locus_tag="VFN38_19005"
     CDS             complement(<1..650)
                     /locus_tag="VFN38_19005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013926.1"
                     /translation="MRRFLLNRRVWLAVLVVGGLLTIALWPKTIDVDTATIGRGPLVV
                     TVDEEGMTRVRERFVVSSPVAGRVLRIELEPGDVVRRGAVVARVRAEPPPLLDERTRA
                     EAQAAVESARAALGRARAEEQRARATFAQLQRDLARVRELARSAVVSAQEVDTRESEA
                     KAAEEAVNAAVYAVRAATSELQRGQARLAPPVANAGGRVVPVTAPVDGVILKRVRE"
     gene            complement(655..>2235)
                     /locus_tag="VFN38_19010"
     CDS             complement(655..>2235)
                     /locus_tag="VFN38_19010"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HET9013927.1"
                     /translation="QLQTFGFITPLIFFGVAAFVLNVALTRALALQRAQIAALKALGY
                     SNPELAWHYIKWGLAIAGAGAIVGIAAGAWLGSGLIGLYNEFYRFPILSYHLSAGVAV
                     ASIGISLAVAALGAQSAVRRAVRIPPAEAMRPEPPARYRRSVFERPTRRFQLTLVTRM
                     ILRNLERHPARTGVSVLGIGFGVAVLFVGLAFIDVMDDLIEQQFVVTMRQDATVSFVE
                     PRSARAAHAVEHLPGVMAVEPMRTVPARLRAGHRSRTLAITGLPAEPQLNRVIDRRLG
                     PIALPADGLVLSKMLAAILEVTPGQSLQVEVLEGSRPVRDVPIVSLVDDTMGLQAYMQ
                     IDAVRRLMREGGAITGAAVTLDPAATDRFNATVKALPAVAGVALRDAALQNFRETMAA
                     SMNMQIFFNVLFAAVIAFGVVYNSARVSLSERARELASLRVLGFTRAEISLILLGELA
                     ILTIAALPLGALIGYVFGELIMTVFKNEVYRLSFTIAPATVAWSFLVVILAALVSGLA
                     VRRRLDRLDLVAVLKTRE"
BASE COUNT          384 a          768 c          779 g          304 t
ORIGIN      
        1 ctttcgcgca cgcgtttgag gatgacgccg tcgaccggcg ccgtcaccgg aacgacgcgg
       61 ccaccggcgt tcgcgacggg cggcgcgagc cgtgcctgcc cgcgttgcag ctcggaggtt
      121 gcggcgcgga ccgcgtagac cgcagcgttg acggcttcct cggccgcctt cgcctccgac
      181 tcgcgcgtat cgacctcctg ggcggacacc actgcgctcc tggccagctc gcgcacgcgg
      241 gcgaggtcgc gctgcaactg cgcgaacgtg gcgcgcgccc gttgctcctc cgcccgcgcg
      301 cgtcccagcg ccgctctggc gctctcgacg gccgcctgcg cctcggcgcg cgtgcgctcg
      361 tcgaggagcg gcggcggctc cgcgcggacg cgcgccacca ccgctccgcg gcgcacgacg
      421 tcgcccggtt cgagctcgat gcgcagcacc cgtccggcaa cgggcgatga caccacgaag
      481 cgctcgcgaa ccctcgtcat gccttcttcg tcgacggtca cgacgagcgg accgcgcccg
      541 atcgtcgccg tatcgacgtc gatcgttttc ggccacagtg cgatcgtcag gagtccgccg
      601 acgaccagca cggcgagcca cacacggcgg ttgagcagaa atcggcgcac gtcgctactc
      661 gcgcgttttc agcacggcca ccaggtccag ccgatcgagc cggcgccgca cggccaggcc
      721 ggagacgagc gccgcgagga tgacgacgag gaacgaccac gcgacggtgg cgggggcgat
      781 ggtgaacgac aggcgataca cctcgttctt gaacacggtc ataatcagtt cgccaaacac
      841 atacccgatg agggcgccga gcggaagcgc cgcgatggtg aggatggcga gctcgccgag
      901 cagaatcagc gaaatctctg cgcgcgtgaa gccgagcaca cgcaggctgg ccagctcgcg
      961 cgcccgttca gagagcgaga cgcgggcgga gttgtacacg acgccgaacg cgatgacggc
     1021 cgcgaacagc acgttgaaga agatctgcat gttcatgctg gcggccatcg tctcgcgaaa
     1081 attctgcagg gcggcatcgc ggagcgccac gccggcaacg gcgggaaggg ccttgacggt
     1141 cgcattgaag cgatcggtcg ccgccggatc gagcgtcacg gcggcgccgg tgatcgcgcc
     1201 tccttcccgc atcaggcggc ggacggcgtc gatctgcatg taggcctgca gccccatcgt
     1261 atcgtcgacg agcgagacaa tgggcacgtc gcgcaccggt cggcttccct cgagtacttc
     1321 gacctgcagc gactggccgg gagtgacctc gagaatggcg gcgagcattt tcgacagcac
     1381 cagcccgtcg gcgggcagcg ctatgggtcc cagtcggcgg tcgatcacgc gattcaactg
     1441 cggctcggcc ggcaatcccg tgatcgcgag ggtccgcgat cgatgcccgg cccgcagtcg
     1501 ggcgggcacc gtgcgcatcg gctccacggc cattacgccc ggcagatgtt ccacggcgtg
     1561 cgcggcccgc gcggaccgtg gttcgacgaa gctgacggtt gcgtcctgac gcatcgtaac
     1621 gacgaactgc tgctcgatca ggtcgtccat cacatcgatg aaggcgagac ccacgaacag
     1681 gaccgcgaca ccgaaaccga tgcccaggac ggagacgccg gtgcgggccg ggtgccgctc
     1741 gagattgcgg aggatcatcc gcgtcacgag ggtaagctgg aaacggcgcg tcggccgctc
     1801 gaacacgctg cgccggtatc tggccggcgg ctccggccgc atcgcctcgg cgggggggat
     1861 gcgcacggcg cggcgcaccg ccgactgcgc cccgagtgcg gcaacggcca ggctgatgcc
     1921 gatggacgcg accgcgaccc cggcggacaa gtgatagctg aggatcggaa accggtagaa
     1981 ctcgttatag aggccgatca gtccggagcc gagccaggca ccggcggcaa tgccgacgat
     2041 cgccccggcg ccggcgatcg ccagccccca cttgatatag tgccaggcga gctccggatt
     2101 cgagtagccg agcgctttca gggccgcgat ctgtgcgcgc tgcagcgcga gcgcgcgggt
     2161 gagcgccaca ttcagcacga atgccgcgac accgaagaag atcagcgggg tgatgaaccc
     2221 gaaggtctgg agctg
//
LOCUS       DASSYW010001207         5295 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_291013, whole genome shotgun sequence.
ACCESSION   DASSYW010001207 DASSYW010000000
VERSION     DASSYW010001207.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 5295)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5295)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5295
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_291013"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..780
                     /locus_tag="VFN38_19015"
     CDS             <1..780
                     /locus_tag="VFN38_19015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013928.1"
                     /translation="VSRSGNSALYLGDTAGGGSTAQSTALDPKLDTMVTYSLYAVIPS
                     PVDDSVWGVSEQYPGFLVRLQRGNNPPESCKSTIFKVPEPGFDPRGVDIDRNGVVWTA
                     LAASSHMASFDVRKCKDLNGPAKLDGSQCREGWTLYQTAGPKLKGTDVPADFHYYNWV
                     DQYNIAGFGANTPFATGSNSDALLALNPQTKEWTTLRVPYPLGFYSRGMDGRIDDPRG
                     GWKGRALYANYGTHFVWHIEGGKGTKGKVVKFQVRPDPLAR"
     gene            complement(846..2174)
                     /gene="zwf"
                     /locus_tag="VFN38_19020"
     CDS             complement(846..2174)
                     /gene="zwf"
                     /locus_tag="VFN38_19020"
                     /inference="COORDINATES: protein motif:HMM:TIGR00871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004345 - glucose-6-phosphate
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HET9013929.1"
                     /translation="MSDPRADALVLFGATGDLAYQQIFPALHAMARRGRLDVPVIAVA
                     RQSWTAGQLRERVRDSLTHHGGVDSAAYETLAARLSYVAGDYQDASSFERLHAALGDA
                     ARPVFYLAIPPSLFGVVASSLARSGVAAGARLVVEKPFGRDLASARALSGTLHESFPG
                     DAVYRIDHFLGKEPVQNLLYVRFANTFLEPIWNASYVERLQITMAETFGVRERGKFYE
                     EVGAIRDVVQNHLLQVLALVGMDAPAASDGASIDAAKVAFLRAVRPLAPADVVRGQYR
                     GYRSETGVAPESNVETYAAVRLSVDNERWAGTPMVIRAGKCLAATFTEVLVTLKRAVP
                     ALFDSATRAPNQVRFRLAPDPSIALSASVKRDGELMAGEDASLIERAQSADDMAPYER
                     LLGDALRGDRTLFGSQAGVEAQWRIVEPVLAGVRPPEMYEPGSWGPPDDF"
     gene            complement(2171..3190)
                     /gene="gnd"
                     /locus_tag="VFN38_19025"
     CDS             complement(2171..3190)
                     /gene="gnd"
                     /locus_tag="VFN38_19025"
                     /inference="COORDINATES: protein motif:HMM:TIGR00872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004616 - phosphogluconate dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="decarboxylating 6-phosphogluconate
                     dehydrogenase"
                     /protein_id="HET9013930.1"
                     /translation="MQLGMIGLGRMGGSMVRRLIRGGHQCVVFDLHAEAMAPLAEAGA
                     VTSGSVADFVARLQPPRAVWLMVPAAVVDRTVESLTPLLQPGDVVIDGGNSNYTDDLR
                     RARALGDAGIAYLDVGVSGGVWGGERGYCLMIGGEAAVVERLEPLFKTLAPGRQAAPP
                     TAGRAAASTADEGYLYCGPSGAGHFVKMVHNGIEYGLMAAYAEGFNILAHAGIGAHRR
                     ADDAETAPLQHPDHYRYDLALPEIAELWRRGSVVGSWLLDLTARALAEHPDLQPFAGR
                     VSDSGEGRWTLHAAVDTGTPAPVLAAALFSRFSSRGESEFANRLLSAMRYQFGGHVER
                     PPARS"
     gene            3221..5281
                     /gene="tkt"
                     /locus_tag="VFN38_19030"
     CDS             3221..5281
                     /gene="tkt"
                     /locus_tag="VFN38_19030"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004802 - transketolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HET9013931.1"
                     /translation="MSDRDELCINTIRMLAVDTVQKAESGHPGMPMGAATLAYVLWTR
                     HLRHSPAHPSWPERDRFVLSAGHGSALLYSLLHLTGYDLTLDDLQHFRQWESRTPGHP
                     ERGCAPGVEVSTGPLGQGLGNALGLAMAERWLAATFNRPGHEVIDHRTYVLASDGDMM
                     EGISSEVASLAATLRLGRLIVLYDANQVTLSATTDITFTEDVGGRFESCGWHVQRIDG
                     MNVEAVDAALRSSQADDRPSLIVARTHLGYGSPKKQDTFGAHGEPLGTDEVRATKRAL
                     GWPEEPPFHVPEEALHVFRAAGARGADLEADWTRRVNAHRHAEPVAGETFAQALSGEL
                     PRGWKDRLPVFTPADGDMATRDAGGKVLNALAAVVTNLVGGSADLDPSTKTALAGLGD
                     FESPHRAAAGDGAPKTQGLAGGVWGYAGRNIHFGVREHAMAAAVTGMAIHGGVVPYAS
                     TFLTFSDYMRPSIRLAALSRAHVIYVWTHDSLALGEDGPTHQPIEHLASLRAIPGMLL
                     LRPSDATETVEAWRVALLHREGPVGIVLTRQKLPILDRTKLAPADGLAKGAYVLIENG
                     APPQAIIIATGSEVSIALAAHETLARDGIACRVIAMPSWELFDQQPQAYRDALLPPGV
                     RARVSIEAASPFGWERYVGRDGVVIGVDRFGASAPGPVVMREYGFTAGHVVAEVKRLL
                     ASPA"
BASE COUNT          827 a         1897 c         1835 g          736 t
ORIGIN      
        1 gtgtcgcgct ccggcaactc ggcgctgtat ctcggcgaca cggcgggggg aggcagcacc
       61 gcccagagca cggcgctcga tccgaagctc gatacgatgg tcacctacag cttgtacgcg
      121 gtgatcccca gcccggtgga cgactcggtc tggggcgtca gcgagcagta ccccggattc
      181 ctggtgcggc tgcagcgtgg caacaacccg cccgagagct gcaagtccac catcttcaag
      241 gtgcccgagc ccggcttcga cccgcgcggc gtggacatcg accgcaacgg cgtggtgtgg
      301 accgcgctcg ccgcgagcag ccacatggcc agcttcgacg tgcggaagtg caaggacctg
      361 aacggcccgg cgaagctgga tggcagccag tgccgcgagg ggtggacgct gtatcagacg
      421 gcgggcccga agctgaaagg caccgacgtg ccggcggact tccactacta caactgggtg
      481 gaccagtaca acatcgccgg gttcggcgcc aacacgccgt tcgccaccgg ctcgaactcg
      541 gacgcgctgc tcgcgctcaa cccgcagacg aaggagtgga cgacgctgcg cgtgccgtat
      601 ccgctcggct tctactcacg cggcatggac gggcgtatcg acgacccgcg cggcggctgg
      661 aaggggcgcg cgctctacgc caactacggc acgcacttcg tgtggcacat cgagggcggc
      721 aagggcacca aggggaaggt cgtgaagttc caggtccgcc ccgacccgct ggcgcgctag
      781 tcgtcgtggg ggccgccttc gggcggccct tttttcgtac gtcgccgccg gtcttcagac
      841 cggcctcaga aatcgtccgg cgggccccag ctgccaggct cgtacatctc cggcggacgc
      901 acgccggcga gcaccggctc gacgatgcgc cactgcgcct cgacgcccgc ctggctccca
      961 aagagcgtgc ggtccccgcg cagcgcatcg cccagcagcc gctcgtacgg cgccatgtcg
     1021 tcggcgctct gcgcacgttc gatgagcgag gcatcctccc ctgccatcag ctcgccatcc
     1081 ctcttcacgc tggccgacaa cgcgatcgac ggatcggggg cgaggcggaa ccgcacctga
     1141 ttcggcgcgc gcgtggctga atcgaacagc gccggtacgg cccgcttgag cgtgacgagc
     1201 acctcggtaa acgtcgccgc caggcacttg ccggcgcgga tcaccatcgg cgtgccggcc
     1261 catcgctcgt tgtccaccga caaccggacg gctgcgtagg tctcgacgtt cgactcgggc
     1321 gccacgccgg tctcggaccg gtagccgcgg tactggcctc gcaccacgtc ggccggcgca
     1381 aggggccgca ccgccctcag gaacgccacc ttggcggcgt cgatggacgc gccgtcgctg
     1441 gcggccggag cgtccatccc cacgagcgcc agcacctgca gcagatggtt ctggacgacg
     1501 tcgcgaatgg cgcccacctc ctcgtagaac ttcccgcgct cccggacgcc aaaggtttcg
     1561 gccatcgtga tctgcaggcg ctcgacgtac gacgcgttcc agatcggctc gagaaacgtg
     1621 ttggcgaagc ggacatagag caggttctgc accggctcct tccccaggaa gtggtcgatg
     1681 cgatagaccg cgtctcccgg aaacgactcg tgcagcgtgc cgctgagcgc gcgcgccgac
     1741 gcgaggtcgc ggccgaacgg cttttccacg acgaggcgtg cgccggcggc gacgccagac
     1801 cgcgccaggc tcgacgccac gaccccgaac aggctgggcg gaatggccag gtagaagacc
     1861 gggcgcgcag cgtcaccgag ggccgcgtgc aggcgttcga acgacgatgc gtcctgatag
     1921 tcgccggcca cgtacgagag gcgggcggcg agcgtctcgt aggccgccga gtcgacgccc
     1981 ccgtggtgcg tgaggctgtc gcgaacgcgc tcccgcagct gcccggctgt ccacgactgg
     2041 cgcgcgaccg cgatgaccgg cacatccagc cggccgcgcc gggccatcgc gtgcagcgcg
     2101 ggaaagatct gctgatacgc cagatcgccg gtcgcaccga acaggacgag cgcgtcggcc
     2161 cgcggatcgc tcacgagcgg gcgggcgggc gttcgacgtg gccgccgaac tgatagcgca
     2221 tggccgacag cagccggttg gcgaactcgc tctcgccgcg cgagctgaag cgcgagaaga
     2281 gcgccgcggc cagaaccggc gcgggcgtcc cggtgtccac cgccgcgtgc agggtccagc
     2341 gcccctcgcc tgaatccgac acacgcccgg caaacggctg caggtccggg tgctcggcca
     2401 gcgcgcgcgc cgtcagatcg agcagccagg agcccacgac gctcccgcgc cgccacagct
     2461 cggcgatctc gggaagggcc aggtcgtagc ggtagtggtc ggggtgctga agcggcgccg
     2521 tttcggcgtc gtccgcacgg cggtgggcgc cgatgccggc gtgcgccagg atgttgaacc
     2581 cttcggcata agcggccatc aacccgtact cgatcccgtt gtggaccatc ttcacgaagt
     2641 ggccggcgcc gctggggccg cagtacaggt agccctcgtc ggcggtgctc gccgcggcgc
     2701 ggcccgcggt gggcggcgcc gcctgacgcc ccggcgccag cgttttgaag agcggctcga
     2761 ggcgttccac caccgccgcc tcaccgccga tcatcaggca atagccgcgc tcgccgcccc
     2821 acacgccgcc gctgacgccg acgtcgagat acgcgatgcc ggcgtcgccg agagcacggg
     2881 cgcgccgcag gtcgtcggtg tagttggaat tgccgccgtc gatcacgacg tcgcccggct
     2941 gcaagagcgg cgtcagcgac tcaacggtcc gatccacgac tgcggccggc accatcagcc
     3001 ataccgcgcg cggcggctgc aaacgggcca cgaagtcagc caccgatccg gacgtcaccg
     3061 cgcccgcctc ggcgagcggc gccatcgcct cggcgtggag gtcgaagacg acgcactggt
     3121 gtcctccgcg gatcagccga cgtaccatgc tgccgcccat gcggccgagt ccgatcatgc
     3181 cgagttgcat ctgacctccc ctccctatca tcctgcggtc atgagcgatc gcgacgagct
     3241 ctgcatcaac acgatccgga tgctggccgt ggacacggtg cagaaggccg agtcgggtca
     3301 tcccggcatg cccatgggag ccgccacgct ggcctacgtg ctgtggacgc gccatctgcg
     3361 ccacagcccg gcgcatccgt cgtggccgga gcgcgaccgc ttcgtgctgt cggccggcca
     3421 cggcagcgcg ctgctctaca gcctgctcca cctgaccgga tacgacctga cgctcgacga
     3481 tctccagcac ttccggcaat gggagagccg cacgcccggc caccccgagc gcgggtgcgc
     3541 gccaggcgtc gaggtgagca cgggtccgtt gggacagggg ctgggcaacg ccctgggcct
     3601 ggcaatggcc gagcgctggc tcgccgcgac gttcaatcgt cccggccatg aagtcatcga
     3661 tcaccgcacc tacgtgctcg ccagcgacgg cgacatgatg gagggcatct ccagcgaggt
     3721 ggcctcgctt gccgccacgc tgcggctcgg gcgcctgatc gttctgtacg acgccaatca
     3781 agtgacgctc tcggccacca ccgacatcac gttcacggaa gacgtcggcg gccgcttcga
     3841 gtcgtgcggc tggcacgtgc agcggatcga cgggatgaat gtcgaggcgg tggacgccgc
     3901 gctccggtcc tcgcaggccg acgatcggcc gtccctgatc gtcgcgcgca cgcacctcgg
     3961 ctacgggagc ccgaagaagc aggacacgtt cggcgcgcac ggcgagccgc tcggcaccga
     4021 cgaagtgcgc gcgacgaaac gcgcgctcgg gtggcccgag gagccgccat tccacgtgcc
     4081 ggaagaggca ctccacgtct ttcgcgccgc gggcgcgcgc ggcgcggacc tcgaggcgga
     4141 ctggactcgc cgcgtgaacg cgcatcggca cgcggagcca gttgccggag agaccttcgc
     4201 gcaggcgctg tccggcgagc tgccgcgcgg gtggaaggac cgcctgccgg tgttcacacc
     4261 ggccgacggt gacatggcga cgcgcgacgc cggcggcaag gtgctgaacg cgctcgccgc
     4321 cgtcgtgacg aatctcgtcg gcggctcggc cgacctcgat ccgtccacca agaccgccct
     4381 ggccggcctg ggcgacttcg agagtccgca tcgcgcggca gctggcgacg gagctccgaa
     4441 aacgcagggg ctcgccggag gcgtttgggg ctacgcggga cggaacatcc atttcggcgt
     4501 gcgcgagcac gcgatggccg cggccgtgac gggcatggcg attcacggcg gcgtcgtgcc
     4561 ctatgcgtcc acgtttctca cgttctccga ctacatgcgt ccgagcatcc ggctggccgc
     4621 cctcagcagg gcgcacgtga tctacgtgtg gacgcacgac agcctggcgc tgggcgagga
     4681 cggccccacg catcaaccga tcgagcacct cgccagtctg cgcgccattc ccggcatgct
     4741 gttgctccgg cccagcgatg cgaccgagac ggtggaggcg tggcgcgtcg cgctcctgca
     4801 tcgcgagggg ccggtcggca tcgtgctcac gcgacagaag cttcccatcc tcgatcggac
     4861 gaagctcgcg ccggcggacg gactcgccaa gggggcgtac gtcctgatcg agaacggggc
     4921 gccgccacag gcgatcatca tcgccaccgg ctccgaggta tccatcgcgc tggcggcgca
     4981 cgagacgctg gcgcgcgacg gcatcgcctg ccgcgtgatt gccatgccgt cgtgggagct
     5041 gttcgaccaa cagccgcagg cctatcgcga cgcgctgctg ccccccggcg tgcgcgcgcg
     5101 cgtgagcatc gaagcagcgt cgccgttcgg ctgggaacgc tacgtcggcc gtgacggcgt
     5161 cgtcatcggc gtcgatcgct tcggcgcctc ggcgcccggg ccagtcgtga tgcgggagta
     5221 cggtttcacc gccggccacg tcgtggccga ggtgaaacgg ctcctggcct cacccgcctg
     5281 aatcgcgcgc ggcgg
//
LOCUS       DASSYW010001208         2679 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_585591, whole genome shotgun sequence.
ACCESSION   DASSYW010001208 DASSYW010000000
VERSION     DASSYW010001208.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2679)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2679)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2679
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_585591"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(61..453)
                     /locus_tag="VFN38_19035"
     CDS             complement(61..453)
                     /locus_tag="VFN38_19035"
                     /inference="COORDINATES: protein motif:HMM:NF013869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MscL family protein"
                     /protein_id="HET9013932.1"
                     /translation="MWREFKAFLVSANVLALAIAVVIGAALAKVVAALVADFIMPLVA
                     FAVPGGDWRTATWNVGPVKFLVGDFAGAVIDFLIIGFIVWRLSKVFIKTAAPAPVRTC
                     PYCRMAIDEAASRCPHCTSDLTLVRSTA"
     gene            complement(546..1334)
                     /locus_tag="VFN38_19040"
     CDS             complement(546..1334)
                     /locus_tag="VFN38_19040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013933.1"
                     /translation="MKRRAVVVAVLATVAVACGDSRRGPSLRERKEAREAQAVPAPPA
                     AAPLPVEPVAAICTDTAEASAMRCAEGVAMRAGDTIVLRLTNVGAAKRVDNPVEGAAY
                     RRYYYAGRFGGENGTPAFHILDVRNVEGGAVELINAATGDSLVVRGVPLLSPDGARFA
                     AVEEPDACELPTQLDVWRVTGDKPVREYSVQPFDCTTDRGWGPTDVTWRSRDTISLSR
                     STLPADPARRANGERDAKRALLVRVAGSWMLDTSKAAAGSLIAR"
     gene            complement(1331..1543)
                     /locus_tag="VFN38_19045"
     CDS             complement(1331..1543)
                     /locus_tag="VFN38_19045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013934.1"
                     /translation="MTHSGPVYEPGPPRQTAGQRSVQMAKAGVSFGSALAITISWSEH
                     HSILWAIIQGFFSWFYVIWYAFTRAA"
     gene            1726..>2679
                     /locus_tag="VFN38_19050"
     CDS             1726..>2679
                     /locus_tag="VFN38_19050"
                     /inference="COORDINATES: protein motif:HMM:NF014427.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HET9013935.1"
                     /translation="MSRITAVVEKTAVVHKVGKVVALAASTGAALVTVVSALYSYGVI
                     GGAESHKSIGNLGAAWVGLRPSVDTAFAIGDTAHFAATIADQSGSILVGGRPTWTTGD
                     STIAVVRSDGSVIARGPGSTTVSVVVGALVANSKILVRQRVATVAVTNAGTDSVLAVP
                     EGSDLKLNALAYDSRGHLVNGRAVEWAVDDSTVATLDKGGLLTANAPGRTYVTAKIDN
                     AVQRTGLRVISTASALAAVAGANQRALAGRTLAQQVVVRATNRRGGPAPGQTVTFKLA
                     EGQGVVEPRTAVTDADGRARATWTLGDYPGRQTLLASVEKVD"
BASE COUNT          414 a          892 c         1035 g          338 t
ORIGIN      
        1 cccaatgcgg gccagcgatg cgctcaggcg gtacacatca atatcaattg gtgcagacga
       61 tcacgccgtc gagcgtacca gggtcaggtc gctcgtgcag tgggggcagc gggacgcggc
      121 ttcgtcgatg gccatccggc agtacgggca ggtgcgcacc ggcgccggcg cggcggtctt
      181 gatgaacacc ttgctgagcc gccagacgat gaagccgatg atcaggaagt cgatcaccgc
      241 gccggcgaag tcgccgacga ggaacttcac cgggccgacg ttccaggtcg cggtgcgcca
      301 gtcgccgccg gggacggcga aggcgacgag gggcatgatg aagtcggcga cgagggcggc
      361 caccaccttg gccagcgcgg cgccgatgac gacggcgatc gcgagggcca gcacgttcgc
      421 cgatacgagg aaagccttga actcacgcca catgccgagc ctccgggaga gagcggagat
      481 catacagcaa accggagagc ggcgcgaggc aggagggacc gccgccgcgc cggcggccgg
      541 ccgggtcagc gcgcgatgag cgagccggcc gccgccttcg aggtgtcgag catccacgac
      601 cccgccacgc gcaccagcag cgcgcgcttc gcgtcgcgct ctccattggc gcggcgagcc
      661 gggtcggcgg ggagggtgct gcgcgagagg gagatcgtgt cgcgcgagcg ccaggtgacg
      721 tccgtggggc cccacccccg gtcggtcgtg cagtcgaagg gctggaccga gtactcgcgc
      781 accggcttgt cgccggtgac gcgccacacg tcgagctggg tcgggagctc gcaggcgtcc
      841 ggctcctcca cggcggcgaa gcgcgcgccg tcgggggaga gcaggggcac gccacggacg
      901 acgagcgaat cgccggtggc ggcgttgatc agctccaccg cgcccccctc gacgttgcgc
      961 acgtcgagga tgtggaaggc cggcgtgccg ttctcgccgc cgaagcggcc ggcgtagtag
     1021 tagcggcgat acgcggcgcc ctccaccggg ttgtccaccc gcttggccgc gccgacgttc
     1081 gtgagccgca gcacgatcgt gtcgccggcg cgcatcgcga ccccctcggc gcagcgcatc
     1141 gccgacgcct ccgcggtgtc ggtgcagatg gcggccaccg gctcgaccgg cagtggcgcg
     1201 gcggccggcg gggcggggac ggcctgcgcc tcgcgggcct ccttgcgctc ccggagcgag
     1261 gggccgcggc gcgagtcgcc gcacgccacg gcgaccgtcg cgagcaccgc gaccacgact
     1321 gcgcgccgct tcacgcggcc cgggtgaagg cgtaccagat cacgtagaac caggagaaga
     1381 atccctggat gatggcccag aggatggagt ggtgctcgct ccacgagatg gtgatcgcga
     1441 gcgcggagcc gaagctcacc cccgccttgg ccatctgcac cgagcgctgg ccggcggtct
     1501 gcctgggcgg accgggctcg tacaccggac ctgaatgcgt catgactggt tcctcgtggg
     1561 gggcggtggc gagaaggccg gcatcgtcca attctgccga aatggtggtc cggagtccag
     1621 ttgacccgcg atcgaggggg ttgccgcggt gccgattcgg cagcgccaga ggagttcggg
     1681 ggaatgctgt taccgacctc gtccggcccc cgtccatata gacacatgag ccgaatcact
     1741 gccgtcgtcg agaagaccgc cgtcgtccac aaggtcggga aggtcgtcgc actcgccgcc
     1801 tccacgggcg ccgcgctggt gacggtcgtg tccgcactct actcctacgg cgtgatcggg
     1861 ggggccgagt cgcacaagtc gatcgggaac ctgggcgcgg cgtgggtggg gctccgtccc
     1921 tcggtagaca ccgcgttcgc gatcggggac acggcgcact tcgccgcgac gatcgccgac
     1981 cagagcggga gcatcctcgt gggagggcgc ccgacgtgga cgacgggcga ctcgacgatc
     2041 gccgtggtgc ggtcggacgg atcggtgatc gcgcgcggcc ccggctcgac gacggtgagc
     2101 gtcgtcgtcg gcgcgctggt ggcgaattcg aagatcctcg tccggcagcg tgtcgcgacc
     2161 gtggccgtga ccaacgccgg caccgacagc gtgctcgcgg tgcccgaggg gagtgacctc
     2221 aagctcaacg cgctcgcgta cgattcgcgc ggccacctgg tgaacggccg cgccgtggaa
     2281 tgggcggtgg acgacagcac cgtggcgacg ctggacaagg gcggcctgct gacggcgaac
     2341 gcgccgggcc gcacctacgt gacggcgaag atcgacaacg cggtgcagcg caccggcctg
     2401 cgggtgatct ccaccgcgtc ggcgctcgcg gcggtggcgg gggcgaacca gcgcgcgctg
     2461 gccggcagga cgctggcgca gcaggtggtg gtgcgggcga cgaaccggcg cggcggaccg
     2521 gcgccgggcc agacggtgac gttcaagctg gcggaggggc agggggtggt ggagccgcgc
     2581 acggcggtca cagacgccga cggccgcgcg cgggcgacgt ggacgctcgg cgactacccc
     2641 gggcgacaga cgctgctggc cagcgtggag aaggtggac
//
LOCUS       DASSYW010001209         2877 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1672476, whole genome shotgun sequence.
ACCESSION   DASSYW010001209 DASSYW010000000
VERSION     DASSYW010001209.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2877)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2877)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2877
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1672476"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..261)
                     /locus_tag="VFN38_19055"
     CDS             complement(<1..261)
                     /locus_tag="VFN38_19055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="squalene/phytoene synthase family protein"
                     /protein_id="HET9013936.1"
                     /translation="MGEAPMESETGRDAQRLAEATRFARSILPAVSRTFALSIRVLPG
                     ELGRAVLAAYLLCRIADTLEDEPALPAADKAALLDELLRCFDD"
     gene            285..1967
                     /locus_tag="VFN38_19060"
     CDS             285..1967
                     /locus_tag="VFN38_19060"
                     /inference="COORDINATES: protein motif:HMM:NF014910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HET9013937.1"
                     /translation="MEDNPAAPAPVPSDGFRGVFRADASARAVYSEAAGIAQILPRAV
                     AVPADADDVVALVRWASRTGTPLVPRGSGSSMAGGAIGDGVIVDLSRLAWLEPVNAAE
                     RTVRCGPGALRDGVDAAARAVGLHFPVDPSSGAYCTVGGMASTNSAGAHTLRYGAMRA
                     WVDALDCVFADGSRAEVRRGAPPPAVPAIQRFLAEAPRLVDAERSAPSRHAGVRKESS
                     GYGLAAYAESGDLVDLLVGSEGTLALIVGLQLRLAPAMPETASVLGAFSSLDDAVAGA
                     AGARESGAVACELLDRTFLDVARKGGAPVPVPESVEAVLLAEVDGASAVDVADRAREL
                     EARFRRAGATDVILALDAETETAMWTLRHAASPILGRLDPSLKSMQFIEDGCVPPARL
                     ADYVRGVRAALGRQGIRGVIFGHAGDAHVHVNPLVDLRDAEWRAKVDALLAEVTALSA
                     RLGGTLAGEHGDGRLRAPLLGQMWPAETLERFAAVKRAFDPAGLLNPGAKVARPGERP
                     VDRVKYDPTLPPLPVDARAALARVERDRAYASFRLDLLTESSAPLDSPSGAV"
     gene            2013..2789
                     /gene="thyX"
                     /locus_tag="VFN38_19065"
     CDS             2013..2789
                     /gene="thyX"
                     /locus_tag="VFN38_19065"
                     /EC_number="2.1.1.148"
                     /inference="COORDINATES: protein motif:HMM:TIGR02170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050797 - thymidylate synthase (FAD)
                     activity [Evidence IEA];
                     GO_process: GO:0009265 - 2'-deoxyribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent thymidylate synthase"
                     /protein_id="HET9013938.1"
                     /translation="MTAPASVAPRLFHAPRITVLSRPAFTTPEHLGVAWMGESTDGER
                     LAEFAGRLCYMSQHNPAGRSTRDYLENIKKQGHGSVLEHANYSLLLEGVSRSLTHELV
                     RHRAGFAYSQLSQRYVDESEASFVVPPAVSGDEALESAWRAQVESAQASYVALVAQLM
                     ERYGWVADKVHRRKMAREAARGVLPNSTETKIVVTGNARAWRTMLELRSSEGAELEIR
                     RVAVAIIRILQQEAPGFFSDFEIYVADDRREAARLGYHKV"
BASE COUNT          353 a         1069 c         1040 g          415 t
ORIGIN      
        1 gtcgtcgaag cagcgcagca gctcgtcgag cagggccgcc ttgtccgccg ccggcagcgc
       61 gggctcgtct tcgagcgtgt cggcgatccg acagaggagg taggccgcca gcaccgcacg
      121 acccagctcg cccggcagta cccggatgct cagcgcgaac gtccgcgaca ccgccggcag
      181 gatggagcga gcgaagcgcg tggcctcggc caggcgctgg gcgtccctcc ccgtctccga
      241 ctccattggc gcttcgccca cgcgcgttag actactcggc acccatggaa gataacccgg
      301 ccgctcccgc ccccgtaccc tccgacggct ttcgtggcgt cttccgcgcc gacgcctcgg
      361 cgcgcgccgt ctacagcgag gcggcgggga tcgcgcagat cctgccgcgc gccgtcgccg
      421 tgcctgccga cgcggacgac gtcgtcgcgc tcgtgcggtg ggcgtcgcgc accggcacgc
      481 cgctcgtgcc tcgcggctcg gggagcagca tggccggcgg cgcgatcggc gacggcgtga
      541 tcgtggacct cagccgcctc gcctggctcg agccggtgaa cgccgcggag cggacggtgc
      601 gctgcggccc gggcgcgctg cgcgacgggg tagacgccgc ggcgcgcgcg gtcgggttgc
      661 acttcccggt ggatccctcc agcggcgcct actgcacggt gggcgggatg gcgtccacca
      721 attcggccgg cgcgcacacg ctccgttacg gggccatgcg tgcgtgggtc gacgcgctcg
      781 actgcgtgtt cgccgacggc tcgcgggcgg aagtccggcg tggcgcgcca ccgccggctg
      841 tccccgcgat ccagcgcttc ctcgccgagg cgccgcggct cgtggacgcc gagcggtccg
      901 cgccgtcgcg gcacgcgggc gtgcggaagg agtcgtccgg ttacggactg gcggcgtacg
      961 ccgagtccgg cgatctcgtg gacctgctcg tgggcagcga gggcacgctc gccctcatcg
     1021 tcggtctcca gctgcggctc gcccccgcca tgcccgagac ggccagcgtg ctcggcgcat
     1081 tctcctcgct cgacgacgcc gtcgccggtg cggccggtgc gcgggagtcc ggcgccgtcg
     1141 cctgcgagct gctcgaccgc accttcctcg acgtcgcgcg caagggtggc gcgcccgtgc
     1201 cggtgcccga gagcgtggag gccgtgctgc tcgccgaggt ggacggtgcg agcgccgtcg
     1261 acgtggccga ccgcgcccgc gagctcgagg cgcgcttccg ccgcgccggc gcgaccgacg
     1321 tgatcctcgc gctggacgcc gagacggaga cggcgatgtg gacgctgcgg cacgcggcca
     1381 gtccgatcct cggtcggctc gatccctcgc tcaagtcgat gcagttcatc gaggacggct
     1441 gcgtgcctcc cgcgcggctg gccgactacg tccgcggcgt gcgcgccgcc ctcgggcgtc
     1501 aggggattcg cggcgtgatc ttcggccacg ccggtgacgc gcacgtccac gtcaatccgc
     1561 tcgtcgacct gcgcgatgcg gagtggcgcg cgaaggtgga cgcgctgctc gcggaggtca
     1621 ccgcactctc cgcgcggctg ggcggcacgc tcgcgggcga gcatggcgac ggccggctcc
     1681 gcgcgccact gctcggacag atgtggccgg ccgagacgct cgagcgcttc gcggcggtga
     1741 agcgggcgtt cgatcccgcc ggactgctga atccgggcgc caaggtcgcg cgccccggcg
     1801 agcgtccggt ggatcgcgtg aagtacgacc cgacgcttcc gccgctgccc gtggacgcgc
     1861 gcgcggcgct cgcccgggtc gagcgcgacc gcgcctacgc gagcttccgc ctcgacctgc
     1921 tcacggagtc gtcggccccg ctcgactctc cgtccggcgc cgtctagctt tcgctgtcgc
     1981 ccgctcctgc ctccgcatct ctcgccgcgc tcatgaccgc tcccgcctcc gtcgccccac
     2041 gcctcttcca cgcgccccgc atcaccgtgc tctcgcgtcc cgcgttcacg acgccggagc
     2101 acctcggcgt cgcctggatg ggggagagca ccgacggcga gcggctcgcc gagttcgcgg
     2161 gacggctctg ctacatgagc cagcacaatc ccgccggccg ctcgacgcgg gactacctgg
     2221 agaacatcaa gaagcagggg cacggcagcg tcctggagca cgccaactac tcgctgctcc
     2281 tcgagggggt gagccgctcg ctcacccacg agctggtgcg ccaccgcgcc ggcttcgcct
     2341 actcgcagct ctcgcagcgc tacgtggatg agagcgaggc gagcttcgtc gtccctccgg
     2401 cggtgtccgg cgacgaggcc ctcgagtcgg cgtggcgcgc gcaggtcgag agtgcgcagg
     2461 cctcgtacgt cgccctcgtc gcccagctga tggagcgcta cggctgggtg gcggacaagg
     2521 tccaccgccg gaagatggcg cgcgaggcgg cgcgcggcgt cctccccaac tccaccgaga
     2581 ccaagatcgt cgtcacgggg aacgcccgcg cctggcgcac gatgctcgag ctccgctcga
     2641 gcgagggcgc ggagttggag atccgtcgcg tagccgtcgc gatcatccgc atcctccagc
     2701 aggaggcgcc gggcttcttc tcggacttcg agatctacgt cgcggacgat cgtagagagg
     2761 cagcgcggtt gggctaccac aaagtgtgaa gtcggaacac cggcgagcga ttcggctggg
     2821 attacttctc tgtggccgcg agaggagctc cccggtgtgg cgagtcgccg gtgttag
//
LOCUS       DASSYW010001210         3362 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1064942, whole genome shotgun sequence.
ACCESSION   DASSYW010001210 DASSYW010000000
VERSION     DASSYW010001210.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 3362)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3362)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3362
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1064942"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..979)
                     /locus_tag="VFN38_19070"
     CDS             complement(<1..979)
                     /locus_tag="VFN38_19070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013939.1"
                     /translation="MSLRKSGRRVTQIVGCALALSLTARPAGAQLMRDSSTSWLFSAG
                     SEGEQYLRILQVAGSTPPTQWTVRPFSSHVLRRLATVDSGHPWAAQLFQRPPRVAWAR
                     VIQPELAGIFNSGFPYGMNDGPLWAGRGPTIAAIGGVEGGLGPLEFIFAPEVFRAENW
                     SFALAPNGHTGPREFSDPVYPNSIDLPQRFGDGAYQRIDPGQSRVQLRVLGLLGGVTT
                     ANEEWGPAIYGPFLLSRNAAGFAHVFAGTDGPLSLGPVQISGRIIAGRLDQSPFAPDS
                     PSPRRYLTGVVGTIGIRQLPGFELGAARVFHNVWPDSGLSVSDVLSQLIK"
     gene            1156..2793
                     /locus_tag="VFN38_19075"
     CDS             1156..2793
                     /locus_tag="VFN38_19075"
                     /inference="COORDINATES: protein motif:HMM:NF025418.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule assembly Wzi family protein"
                     /protein_id="HET9013940.1"
                     /translation="MHLSFAMLSRRVDRRCALPYMLVLGLGVVLAPARSMMGQVVPGA
                     GAAIGSPAADRARLRQITGRDDEESRDSMPLAEGARRLHAIEPTVRLAWNSAIPLEGN
                     DDALWAGRGTNVSVSGGLSYSRWLWNRRVDVIVAPTVAYSQNLPFPTRPGRAPGRSAF
                     SSPWYFGNTSADLPLRFGDLPVTTVGLGQSSVTVSAGDVAFGVASDNEWWGPAVRNTL
                     LLGNGAAGVPRLFVRTTRPRHTRFGDFDGRAFIGALTESPFFDTDPSNDHRSLSGLLV
                     LYHPSVDSGLTVGMSRLVVASAPSAPAVLLHSLDVLLRYDQTRAYDDTTEDGKSAKHA
                     DQLFSLFARWVFPRSGFETYVEWARSETPRSIRELLEVPQNTQAYTLGLQWARARPGG
                     SQFRLQGELTYLEQTKYIADRPPTQDYYTGQAAVQGFTERGQVLGASIGPGASAQFLG
                     SDWLATRWQAGAFVGRVRSENDALYREGGPRLTQHDVTVYSGVRGGVRLPKRDVLATL
                     SVGRRYNYLLQSLFYLASPPNAVDIQNASVTITISPR"
     gene            complement(2845..>3362)
                     /locus_tag="VFN38_19080"
     CDS             complement(2845..>3362)
                     /locus_tag="VFN38_19080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013941.1"
                     /translation="SGGGFWRVEFSAADAGTIVVDVQVSPPGAPGYRVRGLSLVTRPN
                     GGDANLNATWITRPYFNYAGELFRRGTIDDRIQNRPVEFRITGGVQTVGTAVRDSVYR
                     STTDVGGRVSLFPQSEQGGLLPLGTDDLIGDLTVYLEAPLGPSVIRGIHLSPSYMFFD
                     AGRIARFAVGP"
BASE COUNT          495 a         1195 c         1187 g          485 t
ORIGIN      
        1 tcttgatgag ctgcgacagc acgtcgctca cgctcaggcc ggaatccggc catacgttgt
       61 ggaacacgcg tgccgcgccg agctcgaagc cgggcagctg tcggatcccg atggtcccaa
      121 cgacgccggt gaggtagcgg cgcgggctcg ggctgtcggg cgcgaatggc gactgatcga
      181 gccggcccgc gatgatgcga cccgagatct gcaccgggcc gagcgagagg gggccgtccg
      241 tccccgcgaa gacatgggcg aaccccgccg cgttcctgct gagcaggaac ggcccataga
      301 tggccgggcc ccactcctcg ttggccgtcg tcacccctcc gagcaacccg agcactcgca
      361 gctgcaccct gctctgcccc ggatcgatgc gctggtacgc gccatcgccg aaccgctgcg
      421 gcaggtcgat ggagttcgga tacacgggat cggagaactc ccgcggcccg gtgtgtccgt
      481 tcggcgcgag cgcgaacgac cagttctcgg cccggaacac ctcgggggcg aagatgaact
      541 cgagagggcc cagcccacct tccacgccgc cgatggcggc gatcgtcggg ccgcgccctg
      601 cccagagcgg tccgtcgttc attccgtacg ggaagcccga gttgaagatg ccggcgagct
      661 cgggctggat gacccgcgcc catgcgacgc gcggcgggcg ctggaagagc tgcgcggccc
      721 acggatgtcc cgagtcgacg gtcgccaggc gtcggagcac gtgactggag aaggggcgca
      781 ccgtccactg cgtcggcggc gtcgatccag ccacctggag gatgcgcaga tactgctcgc
      841 cttcgctccc cgcgctgaag agccagctcg tggaagagtc gcgcatgagc tgcgccccgg
      901 cggggcgcgc ggtgagcgac agcgccagtg cgcaaccgac gatctgcgtc acgcgccggc
      961 cggacttccg cagggacacg agccacctcg ccgagggacg cggcgccgag agaggagaga
     1021 ggagcgggcg aatcattcgc caatctactc acccgtcgcg gggagaggac ccgggccgag
     1081 agtggtgaca tgcgcctgac gccacgatta gtttcgctgc acgcccgtcc ccccgcttcc
     1141 gcgatccatt tcgtcatgca cctgtcgttc gccatgctga gccgccgggt cgaccggcgt
     1201 tgcgccctgc cgtacatgct cgtgctcggg ctcggcgtcg tcctcgcgcc ggctcgctcg
     1261 atgatggggc aggtggtgcc gggtgcgggc gcggccatcg gatcaccggc ggcggatcgt
     1321 gcgcgcctcc gacagatcac cgggcgcgac gacgaggagt cacgcgactc catgccgctc
     1381 gcggagggtg cccggcgcct gcacgcgatc gagccgaccg tgcgcctcgc gtggaactcc
     1441 gccatcccgc tcgaggggaa tgacgatgcg ctctgggcag ggcgcggcac gaacgtcagc
     1501 gtgagcggcg gcctgtcgta ttcacgctgg ctgtggaacc ggcgcgtgga cgtgatcgtc
     1561 gcgccgaccg tggcatacag ccagaacctg cccttcccca cgcgacccgg acgcgcgccg
     1621 gggcgatccg ccttcagctc gccctggtac ttcgggaaca cgtccgccga cctgccgctg
     1681 cgattcgggg acctgccggt gaccacggtg gggctcggcc agagctcggt caccgtgtcg
     1741 gcgggcgacg tcgccttcgg cgtcgcgtcg gacaacgagt ggtgggggcc ggcggtgcgg
     1801 aacaccctgc tgctcggcaa cggcgccgcg ggcgtccccc gcctgttcgt gcgcacgacg
     1861 cgtccccgcc acacgcgctt cggggacttc gacgggcgcg ccttcatcgg cgcgctcacc
     1921 gagtcgccgt tcttcgacac cgatccctcg aacgatcatc gctcgctcag cgggctgctc
     1981 gtcctctacc acccctcggt cgacagcggg ctgaccgtcg ggatgtcgcg cctcgtggtg
     2041 gcgtccgctc cctcggcgcc cgcggtgctg ctccattcgc tggacgtcct cctgcgctac
     2101 gatcagaccc gcgcctacga cgacaccacc gaggacggca agagcgcgaa gcatgcggac
     2161 cagctgttct cgttgttcgc gcggtgggtg tttccacgca gcggcttcga gacctacgtc
     2221 gagtgggcgc gctcggagac gccgcgctcg atccgcgagc tgctcgaggt gccgcagaac
     2281 acgcaggcct acacgctcgg gctgcagtgg gccagggcac gacccggagg gagccagttc
     2341 cggctgcagg gcgagctgac gtacctggag cagacgaagt acatcgcgga ccgcccgccg
     2401 acccaggact attacacggg ccaggccgcc gtgcagggat tcacggaacg tggccaggtg
     2461 ctcggcgcgt ccatcggccc gggggcgtcc gcgcagttcc tcggttccga ctggctggcc
     2521 acgcgctggc aggcgggcgc gttcgtcggg cgggtccgca gcgagaacga cgcgctgtac
     2581 cgcgaaggcg ggccgcggct gacgcagcac gacgtgaccg tgtactcggg cgtccggggt
     2641 ggggttcgcc tcccgaagcg cgacgtgctc gccaccctgt ccgtgggccg acgctacaac
     2701 tatctcctcc agagcctgtt ctacctcgcg agcccgccga acgcggtgga catccagaac
     2761 gcgtccgtca cgatcaccat ctcgccgcgc tgacgccacc cgcggaacgg cgatcgactc
     2821 ggcggcccgc cggccgtcgc cgcgtcatgg accgacggcg aaccgggcga tgcgccccgc
     2881 gtcgaagaac atgtacgacg ggctgaggtg aatgccgcga atcacgctcg ggccgagcgg
     2941 cgcctcgagg tagacggtga ggtcgccgat caggtcgtcc gtcccgagcg ggagcagccc
     3001 gccctgttcg ctctgcggaa agagcgacac gcgcccgccg acgtcggtgg tggagcggta
     3061 cacgctgtcg cgcaccgcgg tgcccaccgt ctgcacgcct ccggtgatgc ggaactccac
     3121 cgggcggttc tggatgcggt cgtcgatcgt gccgcggcga aagagctcgc ccgcgtagtt
     3181 gaagtacggg cgcgtgatcc aggtggcgtt gaggttggcg tcgccgccgt tgggccgcgt
     3241 gaccagcgac aggccgcgca cgcgatatcc tggcgcgccc ggcgggctca cctgcacgtc
     3301 caccacgatg gttcccgcgt cggcggcgga gaactccacg cgccagaacc cgccgccgct
     3361 cg
//
LOCUS       DASSYW010001211         2904 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_1782998, whole genome shotgun sequence.
ACCESSION   DASSYW010001211 DASSYW010000000
VERSION     DASSYW010001211.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 2904)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2904)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2904
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1782998"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            88..1467
                     /locus_tag="VFN38_19085"
     CDS             88..1467
                     /locus_tag="VFN38_19085"
                     /inference="COORDINATES: protein motif:HMM:NF019845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HET9013942.1"
                     /translation="MTRKHRFEPFKTSGPSRRGLLKGLAAAGAAAVAGRAEATPQARS
                     AAVVSGRRFKGWVSRGTGPARTTLEELTLRPIAGRQVLVRTEATNLCYSNTGAVLGLG
                     PGGGGFGPLAAMALIQGHGGVGVVEAVGPDVRRVQVGDRVCVSGTPQCGACDQCLRGR
                     SDMCQVLGRQGPNDLVAMADMRDGTPVYANSHIGGLADVMVTFEEWVVPVVTRASAAD
                     LGMVCSCVAVAGLGATTSQGTGILRPGSSVAVVGCGPLGLSAVQGARIAGASTIIAID
                     PIRARRDIALKVGATHVLDPNVEGDGLVAKVRELTKGPNDRLWFGGRDAGGLLGGAGA
                     DFVVEAVGADTVPPRSERGPDPTGIVPLRQSYEMTAAGGDLVTTSLPRGNITLPAVMF
                     TIGGRTHHAGQAGGCSPMRDIPRFVAMLDSGQYNAKALATTVVPIERMREAYEEVVYR
                     TTATAIMTA"
     gene            1478..2338
                     /locus_tag="VFN38_19090"
     CDS             1478..2338
                     /locus_tag="VFN38_19090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013943.1"
                     /translation="MTLTARMAAFAAAVAFVALPAAALFGQAPAAYKTPRTPWGDPDL
                     QGTWPSTDMVGVPIERPVEFGTRATLSEAEFQQRRDLAARQAAADDEEVVVPRAAGGG
                     DGTGPPSHWLERGATQRQNSLIVDPADGRMPKMTPYGAERMAMRARFSSTGEGPFNSA
                     ADLDYYDRCISRGVIGSMLPVVYNNGTEIVQAPGYVAIRYEMIHDTRIIPLDSRPAPA
                     AAIRQYMGDARGRWDGDTLVVETTNFNGTIGVTGNGRLRPASDAMRVTERFTRTGPDT
                     IQYQATVTDL"
     gene            2629..>2904
                     /locus_tag="VFN38_19095"
     CDS             2629..>2904
                     /locus_tag="VFN38_19095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HET9013944.1"
                     /translation="MHVNGMSGQFYMPEVIAPGVALFDYDQDGDLDVYLVQGQPLGPG
                     APVSRGGTPLTDRLYRNDLRVEADGTRRLRFTDVTAHSGIDARGYGMG"
BASE COUNT          440 a         1005 c         1048 g          411 t
ORIGIN      
        1 gagattgggg ctccgcctcg ctagcgcagt gttcaattgc cagccctccg ggcgggcgca
       61 gacgccttga acggtcagcg cagagacttg actcgaaaac atcgatttga gccgttcaag
      121 acgtctgggc cctcccgccg cggactgctc aaagggctgg ccgccgctgg cgcggcggcg
      181 gtggcaggac gcgctgaggc gacaccgcaa gcgcgatctg cggccgtcgt ctccggccgc
      241 cgcttcaagg gctgggtctc gcgcggcacc ggccccgctc gcacgacgct cgaagagctg
      301 acgctgcggc cgattgccgg ccggcaagtg ctggttcgca ccgaagccac caacctctgt
      361 tactcgaaca ccggcgcggt gctgggtctc ggaccgggtg gcggcggctt cgggccgctc
      421 gccgcgatgg cgctgattca agggcacgga ggcgtgggcg tcgtggaagc ggtcggtccc
      481 gacgtgcgcc gcgtgcaagt gggcgatcgc gtgtgcgtgt cgggcacgcc gcagtgcggc
      541 gcctgcgatc agtgcctgcg cgggcgcagc gacatgtgcc aggtcctcgg ccgccaggga
      601 ccgaacgatc tcgtggcgat ggccgacatg cgcgacggca cgccggtcta cgccaactcg
      661 cacatcggcg ggctcgccga cgtgatggtg accttcgagg agtgggtggt gcccgtcgtc
      721 accagggcca gcgccgccga cctcggcatg gtgtgcagct gtgtcgcggt ggccgggctt
      781 ggcgccacca cgtcgcaggg caccggcatc ctcaggcccg ggtcgagcgt cgcggtggtg
      841 ggctgcggtc cgctcggcct cagcgcggtg cagggggcgc ggattgccgg cgcgtccacg
      901 atcatcgcga tcgatcccat ccgcgcgcgc cgcgacatcg cgctgaaggt cggcgccacg
      961 cacgtgctcg atcccaacgt cgaaggcgac ggcctcgtgg ccaaggtgcg cgagctcacc
     1021 aagggcccga acgatcggct gtggttcggc ggccgcgacg cgggcggtct gctcggcggt
     1081 gccggcgccg acttcgtggt cgaggcggtg ggcgccgaca cggtgccgcc gcggtccgaa
     1141 cgcgggccag acccgacggg aatcgtcccg ctgcggcagt cctacgagat gaccgccgcc
     1201 ggcggcgacc tcgtgaccac gagcctgcct cgtggcaaca tcaccttgcc ggccgtgatg
     1261 ttcacgatcg gcggccggac gcatcacgcc ggccaggccg ggggctgcag cccgatgcgc
     1321 gacatccccc gcttcgtcgc gatgctcgac agcggccagt acaacgccaa ggcgctggcc
     1381 acgacggtcg tgccgatcga gcgcatgcgc gaagcgtacg aagaggtcgt gtaccggacg
     1441 acggccacgg ccatcatgac cgcgtaaggg aagacccatg acactcaccg ctcgcatggc
     1501 cgcgttcgcg gcggccgtgg ccttcgtggc gctgccggcc gcggcgctct ttggacaggc
     1561 gccggccgcc tacaagacgc cgcgcacgcc gtggggcgat ccggatctcc aggggacctg
     1621 gccgagcacc gacatggtgg gcgtcccgat cgagcgtccg gtggagttcg gcacgcgcgc
     1681 cacgctctcc gaggccgagt tccagcagcg ccgcgacttg gccgcacgcc aggccgcggc
     1741 cgacgacgaa gaggtggtgg tgccgcgtgc cgctggcggc ggcgacggca cagggccgcc
     1801 ctcgcactgg ctcgagcgcg gcgccacgca gcggcagaac tcgctcatcg tcgatccggc
     1861 cgacgggcgc atgccgaaga tgacgccgta cggcgccgag cggatggcga tgcgcgcgag
     1921 gttcagcagc accggggagg ggcccttcaa ttccgccgcg gatctcgact actacgaccg
     1981 ctgcatttcg cgcggggtga tcggctcgat gctgccggtc gtctacaaca acggcaccga
     2041 aatcgtgcag gcacccggct acgtggcgat ccgctacgag atgattcacg acacgcggat
     2101 catcccgctc gactcccgtc cggcgccggc cgccgcgatc cggcaataca tgggcgacgc
     2161 gcgcgggcgc tgggacggcg acacgctggt ggtggagacg acgaacttca acggcaccat
     2221 cggcgtgacg ggcaacgggc ggctgcgccc cgcaagcgac gccatgcgcg tgaccgagcg
     2281 cttcacgcgc accgggcccg acaccatcca gtaccaggcc acggtgaccg acctctagac
     2341 gtggaccgcg ccgtggacgg tgtcgttccc gctcaagcgc gacgacgcct acggcttcta
     2401 cgagtacgcg tgccacgaag gaaacaacgc gatgcgcaac atcttgagcg gcgctcgcgc
     2461 gtcggagaag tgatccgatt tccagccggt ctcgtgctcg cgagtctgtg cgcggccgcg
     2521 tgctcgtcag gctcgtcagg cgaaccgaaa ggttcgcctc tacgaaaagt cgatgacgtc
     2581 cggtccgact ggttcgtcga tcgggccaag gacacgggcc tcgacttcgt gcacgtcaac
     2641 gggatgtcgg ggcagttcta catgcccgag gtgatcgcgc cgggcgtggc cctcttcgac
     2701 tacgaccagg acggcgatct cgacgtgtac ctggtgcagg ggcagccgct cggaccgggc
     2761 gcgccggtat cgcgcggcgg cacgccgctg accgatcgtc tgtatcgcaa cgacctgcgc
     2821 gtggaggcgg acggcacgcg gcggctgcgc ttcaccgacg tcaccgcgca cagcggcatc
     2881 gatgcgcgcg gctacggcat gggc
//
LOCUS       DASSYW010001212         4647 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Gemmatimonadaceae bacterium isolate SMAG_U691
            k141_714354, whole genome shotgun sequence.
ACCESSION   DASSYW010001212 DASSYW010000000
VERSION     DASSYW010001212.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37968709
            Sequence Read Archive: SRR25158228
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gemmatimonadaceae bacterium (soil metagenome)
  ORGANISM  Gemmatimonadaceae bacterium
            Bacteria; Pseudomonadati; Gemmatimonadota; Gemmatimonadia;
            Gemmatimonadales; Gemmatimonadaceae.
REFERENCE   1  (bases 1 to 4647)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4647)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/10/2024 07:52:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,823
            CDSs (total)                      :: 3,804
            Genes (coding)                    :: 3,793
            CDSs (with protein)               :: 3,793
            Genes (RNA)                       :: 19
            tRNAs                             :: 19
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 0 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 5 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4647
                     /organism="Gemmatimonadaceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_714354"
                     /isolate="SMAG_U691"
                     /isolation_source="soil"
                     /db_xref="taxon:2026741"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="25.805 N 107.1752778 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1980)
                     /locus_tag="VFN38_19100"
     CDS             complement(<1..1980)
                     /locus_tag="VFN38_19100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DPP IV N-terminal domain-containing protein"
                     /protein_id="HET9013945.1"
                     /translation="MSLSIRLSTVLLLAATPLVAQSPRQLTADDYARAERYLGTTTAP
                     LLVGAGVRPIWLPDGRFWYRTTVPGGAAFYIVDPARRTRELLFDQSRLVAALRTATGM
                     AVGGNANPFQSFELAKDSRSITLTAQRRRWTCEFVRYTCAPADSTPASADAPANASVS
                     PDGRRAVFIRSGNLWEKSLVTGVETQLTTDAVPDFGYATDNAGWTHSDRPVVTWSPDS
                     RRIATFQHDGRGVRDMYLVSTNVGGPRLQAWKYPLPGDSVVFRISRVIIGQDQDGRSQ
                     VVRLRMPPDAHRSTVSDHVSCSTGICDAQWYPDGSHLAFVSSSRDHKNAWFRVADAAT
                     GEVRTLFEERMPTQVGDASLAENLWRMLPASNELIWWSQRDNWIHLYLYDLTTGQLKN
                     RITSGEGNVDGILHVDEKARQIYFLGSGKEAGRDPYFQHLYRIGFDGRGQTLLTPENA
                     NHVISVSPDGRWFVDAYSTPDTPPVTVLREMNGRVVQPLERADASRLLATGWRPPTPI
                     RMKARDGTTDIYGLMYTPSTLDSTKKYPIVNHIYPGPQSGSVGPRSFSPARGDNQALA
                     ELGFVVVEIDGMGTPGRSKAFADAYYGRMGDNTLPDQVAGMKELARRYRFIDIDRAGI
                     WGHSGGGFAAADAMFRYPEFFDVGIAESGNHDNRNY"
     gene            2226..2654
                     /locus_tag="VFN38_19105"
     CDS             2226..2654
                     /locus_tag="VFN38_19105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HET9013946.1"
                     /translation="MRFMILIKADKNSEAGVLPDERLLTDMGKFNEELVKAGIMLAGE
                     GLHPSSKGARVRFSGSKRTVIDGPFAETKELVAGFWLWQVKSKEEAIEWVKRIPNPMP
                     GTETEIEIRQVFEVEDFGAAATPEIRAQEQRLRAQTAGKK"
     gene            2694..3980
                     /locus_tag="VFN38_19110"
     CDS             2694..3980
                     /locus_tag="VFN38_19110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HET9013947.1"
                     /translation="MPATDVHRAIDAVWRIESAKLIAGLTRLVRDVGLAEDLAQDALV
                     AALERWPESGVPDNPGAWLMATAKHRGIDRLRRDRLFERKHGEVGIELEALHARAVPD
                     LDAAIDDHVGDDMLGLIFIACHPVLSTEARVSLTLRLLGGLTTDEIARAFLAPEATIA
                     QRIVRAKRTLADARVKFEVPRGAEFTARLSSVLQVIYLVFNEGYSATAGDDWLRPALC
                     EDALRLGRILAGLVPEEPEVHGLVALMEIQASRARARVGPAGEPVLLLDQNRARWDQL
                     LIHRGLAALARAESLGGGTGPYALQAAIAACHARARTAEETDWARIAALYATLAERTP
                     SPIVELNRAVAVGMADGPAAGLALVDALAEEPSLRAYHLLPSVRGDLLAKLGRHDEAR
                     AEFERAASLTRNARERALLLERARAAGPTPARGSVP"
     gene            complement(3952..>4647)
                     /locus_tag="VFN38_19115"
     CDS             complement(3952..>4647)
                     /locus_tag="VFN38_19115"
                     /inference="COORDINATES: protein motif:HMM:NF017487.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF817 domain-containing protein"
                     /protein_id="HET9013948.1"
                     /translation="FAVPRGGLLGIPRYDLLLVIAIAIQGWMLWAKLETWDEVKAITV
                     FHLIGFCLEVFKTSGAIRSWSYPDFAYTKVLGVPLFSGFMYAAVGSYIIQAWRLFDLR
                     VRHHPPYWMATLIAVAIYANFFTHHYVADFRWYLAACALGLYARTTVVYRPLDRDRTM
                     PLLLGFLLIGFFIWLAENISTFFRVWQYPDQLGAWTTVHVSKWSSWSLLVIMTFTIVA
                     NLKHIKERIHVPA"
BASE COUNT          748 a         1535 c         1668 g          696 t
ORIGIN      
        1 gtagttgcgg ttgtcgtgat tgcccgactc ggcgatgccg acgtcgaaga actccggata
       61 ccggaacatc gcgtccgccg cggcgaaccc gccgccggag tgcccccaaa tgcccgcccg
      121 gtcgatgtcg atgaagcggt agcgccgcgc cagctccttc atcccggcaa cctggtcggg
      181 cagcgtgttg tcgcccatgc gaccgtagta cgcgtcggcg aacgccttgg agcgacccgg
      241 cgtccccatc ccgtcgatct ccacgacgac gaatccgagc tcggcgagcg cctggttgtc
      301 tccgcgcgcc ggcgaaaagc tgcgcgggcc cacgctcccc gactgcggcc ccggatagat
      361 gtgattgacg atcggatact tcttcgtcga gtccagcgtg gacggcgtgt acatcaggcc
      421 gtagatgtcc gtcgtgccgt cgcgcgcctt catgcgaatg ggcgtgggcg gcctccaccc
      481 cgtggccagc agccgtgagg catcggcgcg ctcgagcggt tgcaccacgc ggccgttcat
      541 ctcgcgcagc accgtcacgg gcggcgtgtc cggcgtggaa tacgcgtcga cgaaccagcg
      601 cccgtcgggc gagaccgaga tgacgtgatt cgcgttctcg ggggtgagca gcgtctggcc
      661 gcgcccgtcg aacccgatgc gatagaggtg ctggaagtac ggatcgcgcc ccgcttcctt
      721 ccccgagccg aggaagtaga tctgccgcgc cttctcgtcg acgtgcagga tcccgtcgac
      781 gttgccctcg ccgctcgtga tccggttctt cagctggccg gtcgtgagat cgtacaggta
      841 gaggtggatc cagttgtcgc gctgcgacca ccagatcagc tcgttcgagg ccggcagcat
      901 ccgccagaga ttctccgcga gcgacgcgtc gcccacctgc gtcggcatgc gctcctcgaa
      961 cagggtgcgc acctccccgg tcgccgcatc ggcgacgcgg aaccacgcgt tcttgtggtc
     1021 gcgcgagctg gagacgaagg cgagatgcga cccgtccggg taccactgcg cgtcgcagat
     1081 gccggtgctg cacgacacgt gatccgacac ggtcgagcga tgggcgtccg gaggcatgcg
     1141 gagccggacc acctgcgaac ggccatcctg atcctgcccg atgatgacgc ggctgatgcg
     1201 gaacacgacg ctgtcgccgg ggagcggata cttccacgcc tggaggcgtg ggccgccgac
     1261 gttggtggag acgaggtaca tgtcgcgcac gccgcgcccg tcatgctgga acgtcgcgat
     1321 ccggcgcgag tcgggggacc aggtcacgac agggcggtcg ctgtgcgtcc agccggcgtt
     1381 gtcggtggcg tagccgaaat cggggacggc gtcggtcgtg agctgcgtct ccacgccggt
     1441 gacgaggctc ttctcccaca ggttgccgct ccggatgaac acggcgcggc gtccgtccgg
     1501 cgagacgctc gcgttggccg gcgcgtcggc gctcgcgggc gtcgaatcgg ccggcgcgca
     1561 ggtgtagcgg acgaactcgc aggtccagcg ccgccgctgc gcggtcagcg tgatggagcg
     1621 gctgtccttc gccagctcga aggactggaa ggggttggcg ttgccgccca ccgccatgcc
     1681 cgtcgccgta cggagcgcgg cgacgaggcg gctttgatcg aacagcagct cgcgcgtccg
     1741 ccgcgccgga tccacgatat agaaggcggc gccgccgggc acggtggtcc ggtaccagaa
     1801 tcgaccgtcg ggaagccaga tcggccgcac accggcgccg accaggagcg gggcggtcgt
     1861 cgtgccgagg tatcgctcgg cccgcgcgta atcgtccgcg gtgagctggc ggggcgattg
     1921 cgcgacgagg ggtgtcgcgg ccagcagcag cacggtggag aggcggatgg acagtgacat
     1981 cgacactcgg tggtgagacg tgagcggagg ccgttgaagc tattacgagc gcggcgcccc
     2041 cgccgctggg cgtcgctggg ggggacgcgc catgcaaacc ggctgacgag ggtgttgggg
     2101 cgcgaatggc agaatcgcgc ggtggatgtc gattattccc cggctcgttc gacgtgaagg
     2161 tagagcctcg gcaacgcgga ctcccgcacc cagatgcgaa ccgaaccctt tccggagaca
     2221 cgacgatgcg cttcatgatc ctgatcaagg ccgacaagaa ctccgaggca ggcgtgctgc
     2281 ccgacgagcg gctgctcacc gacatgggca agttcaacga ggagctggtg aaggcgggca
     2341 tcatgctcgc cggcgaaggg ctgcatccca gctccaaggg agcgcgagtc cgcttctccg
     2401 gcagcaagcg cacggtgatc gacgggccgt tcgccgagac gaaggagctc gtcgccggct
     2461 tctggctgtg gcaggtgaag tcgaaggagg aggcgatcga atgggtgaag cggatcccca
     2521 acccgatgcc gggcacggag acggagatcg agatccgtca ggtcttcgag gtggaagact
     2581 tcggcgcggc ggccacgccg gagatccgcg cgcaggagca gcggcttcgc gcgcagacgg
     2641 ccgggaagaa gtagtgcctt gaagtcgccg cgcacgaccc cgtaattggg gtcgtgccgg
     2701 cgaccgacgt acaccgcgcg atcgacgcgg tctggagaat cgaatcggcg aagctgatcg
     2761 ccgggctcac gcggctcgtc cgcgacgtgg gcctcgccga ggatctcgca caggatgcgc
     2821 tggtcgccgc gctggagcgc tggccggagt ccggcgtgcc ggacaatccg ggggcgtggc
     2881 tcatggccac ggcgaagcac cgcggcatcg accggctgcg ccgcgacagg ctgttcgagc
     2941 gcaagcacgg cgaggtcggc atcgagctcg aggcgctgca cgcgcgcgcc gtacccgatc
     3001 tcgacgccgc catcgacgat cacgtcgggg acgacatgct cgggctgatc ttcatcgcct
     3061 gccacccggt gctctccacc gaggcgcggg tgtcgttgac ccttcggctc ctcggcgggc
     3121 tcacgaccga cgagatcgcg cgcgccttcc tggcgccgga ggcgacgatc gcgcagcgga
     3181 tcgtgcgcgc gaagcgcacg ctcgccgacg cccgggtgaa gttcgaggtg ccgcgcggcg
     3241 cggagttcac ggcgcggctg tcgtccgtgc tccaggtgat ctatctcgtc ttcaacgagg
     3301 gatactccgc caccgccggc gacgactggc tgcgccccgc gctctgcgaa gatgcgctgc
     3361 gcctcggtcg catcctcgcg gggctggtgc ccgaagagcc cgaggtgcac gggctcgtgg
     3421 cgctgatgga gatccaggcc tctcgcgctc gcgcgcgcgt cggcccggct ggcgagccgg
     3481 tgctgctgct cgaccagaat cgggcgcggt gggatcagct gctcatccac cgcggactcg
     3541 cggcgctggc gcgcgccgaa tcgctcgggg gtgggaccgg accgtacgca cttcaggcgg
     3601 cgatcgccgc ctgccacgct cgcgcccgca ccgcggagga gaccgactgg gcacggatcg
     3661 cggcgctcta cgcgacgctg gccgagcgga ccccgtcgcc gatcgtcgag ctcaatcgcg
     3721 ccgtcgccgt cgggatggcc gacggtcccg ccgcgggact ggcactcgtg gacgcgctgg
     3781 cggaagaacc gtcgctgcgc gcctaccatc tcctgccgag cgtgcgcggc gacctgctgg
     3841 cgaagctcgg tcggcacgac gaggcgcgtg cggagttcga gcgcgccgcg tcgctcacgc
     3901 gcaacgcccg cgagcgcgcg ctcctgctcg agcgcgcccg tgcggccggc cctacgccgg
     3961 cacgtggatc cgttccttga tgtgcttgag gttcgccacg atggtgaacg tcatgatcac
     4021 cagcagcgac cacgagctcc acttgctcac gtgcaccgtg gtccaggcgc cgagctgatc
     4081 ggggtactgc cacacgcgga agaaggtgct gatgttctcg gccagccaga tgaagaagcc
     4141 gatcaggagg aagccgagga gcagcggcat cgtgcggtcg cggtccagcg gccggtacac
     4201 gacggtcgtg cgcgcgtaga ggccgagcgc gcaggcggcg aggtaccagc ggaagtcggc
     4261 gacgtaatga tgcgtgaaga agttcgcgta gatcgccacg gcgatcagcg tcgccatcca
     4321 gtacggtgga tggtgccgca ctcgcaggtc gaagaggcgc catgcctgga tgatgtagct
     4381 cccaacggcg gcgtacatga agccggagaa cagcggcaca cccaagacct tggtgtacgc
     4441 gaagtccgga tagctccatg acctgatggc accggaggtc ttgaacacct cgaggcagaa
     4501 tccgatcagg tgaaagacgg tgatcgcctt cacttcgtcc cacgtttcca gcttcgccca
     4561 cagcatccag ccctggatgg caatggcgat caccagcagg aggtcgtagc gcgggatgcc
     4621 gagcaggccg cccctcggca cggcgaa
//
